HHsearch results for GI: peg_74 and protein with PDBid: 1jk0_B
>1jk0_B RNR Y4, ribonucleoside-diphosphate reductase small chain 2; ribonucleotide reductase, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: a.25.1.2 PDB: 1sms_A
Probab=100.00 E-value=3.9e-39 Score=276.40 Aligned_cols=161 Identities=23% Similarity=0.378 Sum_probs=145.1
Q ss_pred CCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 32022427766822008762789999999998504983346734616852040148989999999999999776367777
Q 537021.9.peg.7 19 VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN 98 (196)
Q Consensus 19 ~~~~~ii~~~~~~~~l~PikY~~~~~~yk~~~~~fW~peEI~l~~D~~dw~~~~~Lt~~Er~~~~~iL~ffs~~D~~v~~ 98 (196)
.++.+++..++++.+++||+|||+|++|++++++||+|+||+|++|++||++ ||++||++++++|+||+++|++|++
T Consensus 22 ~~~e~~l~en~~r~~~~PikY~~~~~~ykk~~~~fW~peEi~ls~D~~d~~~---Ls~~Er~~~~~~L~~~~~~D~~v~~ 98 (345)
T 1jk0_B 22 EKDEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQK---LTDDQKTYIGNLLALSISSDNLVNK 98 (345)
T ss_dssp TTTCTTTSCCTTCCSCCSCSCHHHHHHHHHHHHTCCCGGGCCCTTTSTTTTT---SCTTHHHHHHHHHHHHC--------
T ss_pred CCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 2368655689886243286787999999999976998201170644898986---9999999999999999999999998
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH--HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 7788887652868999999999999999999999999982376368--99999509999999999999998530113344
Q 537021.9.peg.7 99 NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE--LFNMYREVPSITAKANWALQYTQTLSSPSFHY 176 (196)
Q Consensus 99 nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d~~e--if~~~~~~p~i~~K~~~~~k~~~~i~~~~~~~ 176 (196)
++...+++.++.||+++++++|+++|+||++|||+|+++++.++++ +|+.+.+.|.+++|++|+.++.+.
T Consensus 99 ~~~~~~~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~~l~~d~~~~~~f~~~~~~~~~~~k~~~~~~~~~~-------- 170 (345)
T 1jk0_B 99 YLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMVDAFFKDPKNIPLFKEIANLPEVKHKAAFIERWISN-------- 170 (345)
T ss_dssp -CHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCTTSCSGGGGCSCHHHHHHHHHHHHTTSS--------
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--------
T ss_conf 789999987783999999999999999999999999998546746889999998439999998887751256--------
Q ss_pred CCHHHHHHHHHHHHHHHH
Q ss_conf 793348999999999963
Q 537021.9.peg.7 177 WNKRRRSRILTRSLRFLC 194 (196)
Q Consensus 177 ~~~e~~~~~l~~li~f~~ 194 (196)
....++.++++++|
T Consensus 171 ----~~~~~~~~li~~~~ 184 (345)
T 1jk0_B 171 ----DDSLYAERLVAFAA 184 (345)
T ss_dssp ----SSCCHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHHHH
T ss_conf ----37889999999873