HHsearch results for GI: peg_74 and protein with PDBid: 1jk0_B

>1jk0_B RNR Y4, ribonucleoside-diphosphate reductase small chain 2; ribonucleotide reductase, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: a.25.1.2 PDB: 1sms_A
Probab=100.00  E-value=3.9e-39  Score=276.40  Aligned_cols=161  Identities=23%  Similarity=0.378  Sum_probs=145.1

Q ss_pred             CCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             32022427766822008762789999999998504983346734616852040148989999999999999776367777
Q 537021.9.peg.7   19 VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN   98 (196)
Q Consensus        19 ~~~~~ii~~~~~~~~l~PikY~~~~~~yk~~~~~fW~peEI~l~~D~~dw~~~~~Lt~~Er~~~~~iL~ffs~~D~~v~~   98 (196)
                      .++.+++..++++.+++||+|||+|++|++++++||+|+||+|++|++||++   ||++||++++++|+||+++|++|++
T Consensus        22 ~~~e~~l~en~~r~~~~PikY~~~~~~ykk~~~~fW~peEi~ls~D~~d~~~---Ls~~Er~~~~~~L~~~~~~D~~v~~   98 (345)
T 1jk0_B           22 EKDEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQK---LTDDQKTYIGNLLALSISSDNLVNK   98 (345)
T ss_dssp             TTTCTTTSCCTTCCSCCSCSCHHHHHHHHHHHHTCCCGGGCCCTTTSTTTTT---SCTTHHHHHHHHHHHHC--------
T ss_pred             CCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             2368655689886243286787999999999976998201170644898986---9999999999999999999999998


Q ss_pred             HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH--HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             7788887652868999999999999999999999999982376368--99999509999999999999998530113344
Q 537021.9.peg.7   99 NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE--LFNMYREVPSITAKANWALQYTQTLSSPSFHY  176 (196)
Q Consensus        99 nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d~~e--if~~~~~~p~i~~K~~~~~k~~~~i~~~~~~~  176 (196)
                      ++...+++.++.||+++++++|+++|+||++|||+|+++++.++++  +|+.+.+.|.+++|++|+.++.+.        
T Consensus        99 ~~~~~~~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~~l~~d~~~~~~f~~~~~~~~~~~k~~~~~~~~~~--------  170 (345)
T 1jk0_B           99 YLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMVDAFFKDPKNIPLFKEIANLPEVKHKAAFIERWISN--------  170 (345)
T ss_dssp             -CHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCTTSCSGGGGCSCHHHHHHHHHHHHTTSS--------
T ss_pred             HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--------
T ss_conf             789999987783999999999999999999999999998546746889999998439999998887751256--------


Q ss_pred             CCHHHHHHHHHHHHHHHH
Q ss_conf             793348999999999963
Q 537021.9.peg.7  177 WNKRRRSRILTRSLRFLC  194 (196)
Q Consensus       177 ~~~e~~~~~l~~li~f~~  194 (196)
                          ....++.++++++|
T Consensus       171 ----~~~~~~~~li~~~~  184 (345)
T 1jk0_B          171 ----DDSLYAERLVAFAA  184 (345)
T ss_dssp             ----SSCCHHHHHHHHHH
T ss_pred             ----CHHHHHHHHHHHHH
T ss_conf             ----37889999999873