HHSEARCH alignment of GI: peg_74 and SCOP domain: d1jk0b_

Alignment
>d1jk0b_ a.25.1.2 (B:) Ribonucleotide reductase R2 {Baker's yeast (Saccharomyces cerevisiae), Y4 [TaxId: 4932]}
Probab=100.00  E-value=8.6e-40  Score=279.13  Aligned_cols=161  Identities=23%  Similarity=0.378  Sum_probs=144.5

Q ss_pred             CCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             32022427766822008762789999999998504983346734616852040148989999999999999776367777
Q 537021.9.peg.7   19 VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN   98 (196)
Q Consensus        19 ~~~~~ii~~~~~~~~l~PikY~~~~~~yk~~~~~fW~peEI~l~~D~~dw~~~~~Lt~~Er~~~~~iL~ffs~~D~~v~~   98 (196)
                      -++..++..++++.+|+||||||+|++|+++++|||+|+||+|++|++||++   ||+.||++++++|+||+++|++|++
T Consensus        12 ~~~e~~l~e~~~r~~l~Piky~~~~~~y~~~~~~fW~peEi~l~~D~~d~~~---Lt~~Ek~~~~~~l~~f~~~D~~v~~   88 (285)
T d1jk0b_          12 EKDEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQK---LTDDQKTYIGNLLALSISSDNLVNK   88 (285)
T ss_dssp             TTTCTTTSCCTTCCSCCSCSCHHHHHHHHHHHHTCCCGGGCCCTTTSTTTTT---SCTTHHHHHHHHHHHHC--------
T ss_pred             CCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             1278766789986356687687999999999976998300370621898986---9999999999999999998633654


Q ss_pred             HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH--HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             7788887652868999999999999999999999999982376368--99999509999999999999998530113344
Q 537021.9.peg.7   99 NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE--LFNMYREVPSITAKANWALQYTQTLSSPSFHY  176 (196)
Q Consensus        99 nl~~~i~~~i~~pE~~~~~~~q~~~E~iHs~sYs~il~tl~~d~~e--if~~~~~~p~i~~K~~~~~k~~~~i~~~~~~~  176 (196)
                      ++...+++.++.||+++++++|+++|+||++|||+++++++.++++  +|+++.+.|.+++|++|+.++.+.        
T Consensus        89 ~~~~~i~~~~~~pE~~~~~~~q~~~E~iHs~sYs~il~~l~~~~e~~~~f~~~~~~~~~~~k~~~~~~~~~~--------  160 (285)
T d1jk0b_          89 YLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMVDAFFKDPKNIPLFKEIANLPEVKHKAAFIERWISN--------  160 (285)
T ss_dssp             -CHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCTTSCSGGGGCSCHHHHHHHHHHHHTTSS--------
T ss_pred             HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCC--------
T ss_conf             327666564044799999999999997999999999999656758889999886258899776666631143--------


Q ss_pred             CCHHHHHHHHHHHHHHHH
Q ss_conf             793348999999999963
Q 537021.9.peg.7  177 WNKRRRSRILTRSLRFLC  194 (196)
Q Consensus       177 ~~~e~~~~~l~~li~f~~  194 (196)
                          ....+..++++|+|
T Consensus       161 ----~~~~~~~~~i~~~~  174 (285)
T d1jk0b_         161 ----DDSLYAERLVAFAA  174 (285)
T ss_dssp             ----SSCCHHHHHHHHHH
T ss_pred             ----CHHHHHHHHHHHHH
T ss_conf             ----31679999999998


SCOP domain information

class: All alpha proteins
fold: Ferritin-like
superfamily: Ferritin-like
family: Ribonucleotide reductase-like
domain: Ribonucleotide reductase R2
species: Baker's yeast (Saccharomyces cerevisiae), Y4 [TaxId: 4932]