BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 537021.9.peg.74_1
         (196 letters)

Database: nr 
           13,984,884 sequences; 4,792,584,752 total letters

Searching..................................................done


Results from round 1


>gi|254780845|ref|YP_003065258.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254780964|ref|YP_003065377.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254040522|gb|ACT57318.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254040641|gb|ACT57437.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
          Length = 352

 Score =  366 bits (940), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 174/174 (100%), Positives = 174/174 (100%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP
Sbjct: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ
Sbjct: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF
Sbjct: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174


>gi|72163401|ref|YP_291058.1| ribonucleotide-diphosphate reductase subunit beta [Thermobifida
           fusca YX]
 gi|71917133|gb|AAZ57035.1| ribonucleoside-diphosphate reductase [Thermobifida fusca YX]
          Length = 354

 Score =  304 bits (778), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 138/173 (79%), Positives = 158/173 (91%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
            N TGL  IQ+G  RV+V+DKRM+N+R+DVNQLLPLKY WAWEKYL+ACNNHWMPTEV M
Sbjct: 4   VNTTGLGEIQSGAARVDVEDKRMINSRADVNQLLPLKYRWAWEKYLAACNNHWMPTEVSM 63

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
           Q D+ALWKSK+GLT+DERLM+KRNLGFFA++ESLVANNIVLA+YRHL+NPECRQYLLRQA
Sbjct: 64  QADIALWKSKDGLTEDERLMVKRNLGFFATAESLVANNIVLAVYRHLTNPECRQYLLRQA 123

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           FEEAVH+HTFQYI  SLGLDEGELFNMYREVPSITAK  WAL+YT+ L +P+F
Sbjct: 124 FEEAVHTHTFQYICESLGLDEGELFNMYREVPSITAKDAWALRYTRNLENPNF 176


>gi|192291019|ref|YP_001991624.1| ribonucleotide-diphosphate reductase subunit beta [Rhodopseudomonas
           palustris TIE-1]
 gi|192284768|gb|ACF01149.1| Ribonucleoside-diphosphate reductase [Rhodopseudomonas palustris
           TIE-1]
          Length = 373

 Score =  300 bits (767), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 138/172 (80%), Positives = 152/172 (88%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           + TGL  I  G  RV VDDKRM+NAR+DVNQLLPLKY WAWEKYL+ACNNHWMPTEV MQ
Sbjct: 24  DTTGLGTIDRGAARVRVDDKRMINARADVNQLLPLKYHWAWEKYLAACNNHWMPTEVSMQ 83

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D+ALWKS++GLT+DER M+KRNLGFFA+SESLVANNIVLAIYRHL+NPECRQYLLRQAF
Sbjct: 84  ADIALWKSRDGLTEDERHMVKRNLGFFAASESLVANNIVLAIYRHLTNPECRQYLLRQAF 143

Query: 123 EEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           EEAVH+HTFQYI+ SLGLDEGELFNMYREVPSIT KA WAL YT+ L  P F
Sbjct: 144 EEAVHTHTFQYIVESLGLDEGELFNMYREVPSITDKAAWALDYTKHLDDPHF 195


>gi|315122301|ref|YP_004062790.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter solanacearum CLso-ZC1]
 gi|313495703|gb|ADR52302.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter solanacearum CLso-ZC1]
          Length = 372

 Score =  299 bits (765), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 140/192 (72%), Positives = 160/192 (83%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +A+  GL PIQ G  R++ D+KRM+NARSDVNQLLPLKY WAWEKYL  CNNHWMPTEV 
Sbjct: 21  IADTVGLGPIQKGSARIHADEKRMINARSDVNQLLPLKYKWAWEKYLFGCNNHWMPTEVS 80

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           MQ D+ALW+SKNGLT+DER MIKRNLGFFA+SESLVANNIVLAIYRH+SNPECRQYLLRQ
Sbjct: 81  MQADIALWQSKNGLTNDERHMIKRNLGFFATSESLVANNIVLAIYRHISNPECRQYLLRQ 140

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEAVH+HTFQYI+ SL L+EGELFNMYRE+PSIT KA+WAL+YT+ L+S SF      
Sbjct: 141 AFEEAVHTHTFQYIVESLSLNEGELFNMYREIPSITNKASWALRYTKNLNSTSFSTGTDD 200

Query: 181 RRSRILTRSLRF 192
           R    L   + F
Sbjct: 201 RDQDFLRDLIAF 212


>gi|110635036|ref|YP_675244.1| ribonucleotide-diphosphate reductase subunit beta [Mesorhizobium
           sp. BNC1]
 gi|110286020|gb|ABG64079.1| ribonucleotide reductase [Chelativorans sp. BNC1]
          Length = 369

 Score =  299 bits (765), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 138/170 (81%), Positives = 154/170 (90%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
           TGL  I+ G  RV+VDDKRM+NAR+DVNQLLPLKY WAWEKYLS CNNHWMPTEV MQ D
Sbjct: 22  TGLGTIERGAGRVSVDDKRMINARADVNQLLPLKYRWAWEKYLSGCNNHWMPTEVSMQAD 81

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           +ALWKS++GLT+DER M+KRNLGFFA+SESLVANNIVLAIYRHL+NPECRQYLLRQAFEE
Sbjct: 82  IALWKSRDGLTEDERRMVKRNLGFFAASESLVANNIVLAIYRHLTNPECRQYLLRQAFEE 141

Query: 125 AVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           AVH+HTFQYI+ SLGLDEGELFNMYREVPSIT KA WAL+YT+ L  P+F
Sbjct: 142 AVHTHTFQYIVESLGLDEGELFNMYREVPSITDKAAWALEYTRHLDDPNF 191


>gi|85714830|ref|ZP_01045816.1| ribonucleotide reductase [Nitrobacter sp. Nb-311A]
 gi|85698316|gb|EAQ36187.1| ribonucleotide reductase [Nitrobacter sp. Nb-311A]
          Length = 389

 Score =  299 bits (765), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 138/173 (79%), Positives = 152/173 (87%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           A+ TGL  I  G  RV VDDKRM+NAR+DVNQLLP KY WAWEKYLS CNNHWMPTEV M
Sbjct: 39  ADATGLGDIDRGAARVRVDDKRMINARADVNQLLPFKYRWAWEKYLSGCNNHWMPTEVSM 98

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
           Q D+ALWKS++GLTDDER M+KRNLGFFA+SESLVANNIVLAIYRHL+NPECRQYLLRQA
Sbjct: 99  QADIALWKSRDGLTDDERRMVKRNLGFFAASESLVANNIVLAIYRHLTNPECRQYLLRQA 158

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           FEEAVH+HTFQYI+ SLGLDEGELFNMYREVPSIT KA WAL++T+ L  P F
Sbjct: 159 FEEAVHTHTFQYIVESLGLDEGELFNMYREVPSITDKAAWALKHTRHLDDPGF 211


>gi|92119123|ref|YP_578852.1| ribonucleotide-diphosphate reductase subunit beta [Nitrobacter
           hamburgensis X14]
 gi|91802017|gb|ABE64392.1| Ribonucleoside-diphosphate reductase [Nitrobacter hamburgensis X14]
          Length = 416

 Score =  298 bits (762), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 138/172 (80%), Positives = 151/172 (87%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           + TGL  I     RV VDDKRM+NAR+DVNQLLPLKYGWAWEKYLS CNNHWMPTEV MQ
Sbjct: 67  DATGLGAIDRSGGRVRVDDKRMINARADVNQLLPLKYGWAWEKYLSGCNNHWMPTEVSMQ 126

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D+ALWKSK+GLTDDER M+KRNLGFFA+SESLVANNIVLAIYRHL+NPECRQYLLRQAF
Sbjct: 127 ADIALWKSKDGLTDDERRMVKRNLGFFAASESLVANNIVLAIYRHLTNPECRQYLLRQAF 186

Query: 123 EEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           EEAVH+HTFQYI+ SLGLDEGELFNMYREV SIT KA WAL++T+ L  P F
Sbjct: 187 EEAVHTHTFQYIVESLGLDEGELFNMYREVSSITDKAAWALKHTRHLDDPGF 238


>gi|75677068|ref|YP_319489.1| ribonucleotide-diphosphate reductase subunit beta [Nitrobacter
           winogradskyi Nb-255]
 gi|74421938|gb|ABA06137.1| ribonucleotide reductase [Nitrobacter winogradskyi Nb-255]
          Length = 391

 Score =  296 bits (759), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 138/172 (80%), Positives = 151/172 (87%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           +  GL  I  G  RV VDDKRM+NAR+DVNQLLPLKY WAWEKYLS CNNHWMPTEV MQ
Sbjct: 42  DAAGLGDIDRGGARVRVDDKRMINARADVNQLLPLKYRWAWEKYLSGCNNHWMPTEVSMQ 101

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D+ALWKSK+GLTDDER M+KRNLGFFA+SESLVANNIVLAIYRHL+NPECRQYLLRQAF
Sbjct: 102 ADIALWKSKDGLTDDERRMVKRNLGFFAASESLVANNIVLAIYRHLTNPECRQYLLRQAF 161

Query: 123 EEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           EEAVH+HTFQYI+ SLGLDEGELFNMYREVPSIT KA WAL++T+ L  P F
Sbjct: 162 EEAVHTHTFQYIVESLGLDEGELFNMYREVPSITDKAAWALKHTRHLDDPGF 213


>gi|297563527|ref|YP_003682501.1| ribonucleoside-diphosphate reductase [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296847975|gb|ADH69995.1| Ribonucleoside-diphosphate reductase [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 360

 Score =  294 bits (753), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 134/170 (78%), Positives = 152/170 (89%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
           +GL  I+   +RVNVDDK M+NAR+DVNQLLPLKY WAWEKYL+ CNNHWMPTEV MQ D
Sbjct: 13  SGLGEIERDAERVNVDDKAMINARADVNQLLPLKYTWAWEKYLAGCNNHWMPTEVAMQAD 72

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           +ALWKS++GLT+DERLM+KRNLGFFA++ESLVANNIVLA+YR L+NPECRQYLLRQAFEE
Sbjct: 73  IALWKSRDGLTEDERLMLKRNLGFFATAESLVANNIVLAVYRQLTNPECRQYLLRQAFEE 132

Query: 125 AVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           AVH+HTFQYI  SLGLDEGELFNMYREVPSITAK  WAL+YTQ L +P F
Sbjct: 133 AVHTHTFQYICESLGLDEGELFNMYREVPSITAKDAWALKYTQNLENPEF 182


>gi|114321252|ref|YP_742935.1| ribonucleotide-diphosphate reductase subunit beta [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114227646|gb|ABI57445.1| Ribonucleoside-diphosphate reductase [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 354

 Score =  293 bits (751), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 135/172 (78%), Positives = 151/172 (87%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           N TGL  I+AG  RV+VD+KRM+N R+DVNQLLPLKY WAWEKYL+ CNNHWMPTEVPM 
Sbjct: 5   NATGLEAIEAGAHRVSVDEKRMINCRADVNQLLPLKYEWAWEKYLAGCNNHWMPTEVPMG 64

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D+ALW+  +GLT DERLMIKRNLGFFA+SESLVANNIVLAIYRH++NPECRQYLLRQAF
Sbjct: 65  ADIALWRHPDGLTADERLMIKRNLGFFATSESLVANNIVLAIYRHITNPECRQYLLRQAF 124

Query: 123 EEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           EEA+H+HTFQYI+ SL LDEGELFNMYREVPSIT KA WAL+YTQ L S  F
Sbjct: 125 EEAIHTHTFQYIVESLDLDEGELFNMYREVPSITDKAAWALKYTQNLESGHF 176


>gi|209885874|ref|YP_002289731.1| ribonucleoside-diphosphate reductase, beta subunit [Oligotropha
           carboxidovorans OM5]
 gi|209874070|gb|ACI93866.1| ribonucleoside-diphosphate reductase, beta subunit [Oligotropha
           carboxidovorans OM5]
          Length = 377

 Score =  293 bits (749), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 136/173 (78%), Positives = 150/173 (86%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           A  TGL  I     RV+VD+KRM+N R+DVNQLLPLKY WAWEKYLS CNNHWMPTEV M
Sbjct: 27  AEQTGLGEIDRTGGRVSVDEKRMINCRADVNQLLPLKYKWAWEKYLSGCNNHWMPTEVSM 86

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
           Q D+ALWKS++GLTDDER  IKRNLGFFA+SESLVANNIVLAIYRHL+NPECRQYLLRQA
Sbjct: 87  QADIALWKSRDGLTDDERRAIKRNLGFFAASESLVANNIVLAIYRHLTNPECRQYLLRQA 146

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           FEEAVH+HTFQYI+ SLGLDEGELFNMYREVPSIT KA WAL++T+ L  P F
Sbjct: 147 FEEAVHTHTFQYIVESLGLDEGELFNMYREVPSITDKAAWALKHTKNLDDPDF 199


>gi|299134880|ref|ZP_07028072.1| Ribonucleoside-diphosphate reductase [Afipia sp. 1NLS2]
 gi|298590690|gb|EFI50893.1| Ribonucleoside-diphosphate reductase [Afipia sp. 1NLS2]
          Length = 373

 Score =  292 bits (748), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 135/170 (79%), Positives = 150/170 (88%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
           TGL  I     RV+VD+KRM+N R+DVNQLLPLKY WAWEKYL+ CNNHWMPTEV MQ D
Sbjct: 26  TGLGAIDRSGGRVSVDEKRMINCRADVNQLLPLKYKWAWEKYLAGCNNHWMPTEVSMQAD 85

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           +ALWKS++GLTDDER  IKRNLGFFA+SESLVANNIVLAIYRHL+NPECRQYLLRQAFEE
Sbjct: 86  IALWKSRDGLTDDERRAIKRNLGFFAASESLVANNIVLAIYRHLTNPECRQYLLRQAFEE 145

Query: 125 AVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           AVH+HTFQYI+ SLGLDEGELFNMYREVPSIT KA WAL++TQ L +P F
Sbjct: 146 AVHTHTFQYIVESLGLDEGELFNMYREVPSITDKAAWALKHTQNLDNPDF 195


>gi|226227154|ref|YP_002761260.1| ribonucleoside-diphosphate reductase beta subunit [Gemmatimonas
           aurantiaca T-27]
 gi|226090345|dbj|BAH38790.1| ribonucleoside-diphosphate reductase beta subunit [Gemmatimonas
           aurantiaca T-27]
          Length = 371

 Score =  291 bits (746), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 136/170 (80%), Positives = 148/170 (87%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
           TGL  I     RV VDDK M+N R+DVNQLLPLKY WAWEKYLS CNNHWMPTEV MQ D
Sbjct: 24  TGLGEIDRHGGRVRVDDKAMINCRADVNQLLPLKYRWAWEKYLSGCNNHWMPTEVSMQAD 83

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           LA+W+S++GLTDDER  IKRNLGFFA+SESLVANNIVLAIYRHL+NPECRQYLLRQAFEE
Sbjct: 84  LAIWRSRDGLTDDERRAIKRNLGFFAASESLVANNIVLAIYRHLTNPECRQYLLRQAFEE 143

Query: 125 AVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           A+H+HTFQYI  SLGLDEGELFNMYREVPSITAKA WAL+YTQ L+ P F
Sbjct: 144 AIHTHTFQYICESLGLDEGELFNMYREVPSITAKAAWALKYTQHLADPGF 193


>gi|300022335|ref|YP_003754946.1| ribonucleoside-diphosphate reductase [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299524156|gb|ADJ22625.1| Ribonucleoside-diphosphate reductase [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 374

 Score =  290 bits (741), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 139/188 (73%), Positives = 153/188 (81%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
           TGL  I     RV VDDK M+NAR+DVNQLLPLKY WAWEKYL+ CNNHWMPTEV MQ D
Sbjct: 27  TGLGNIDRNGGRVRVDDKAMINARADVNQLLPLKYRWAWEKYLAGCNNHWMPTEVSMQAD 86

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           +ALWKSK+GLT++ER MIKRNLGFFA+SESLVANNIVLAIYR+L+NPECRQYLLRQAFEE
Sbjct: 87  IALWKSKDGLTEEERRMIKRNLGFFAASESLVANNIVLAIYRNLTNPECRQYLLRQAFEE 146

Query: 125 AVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           AVH+HTFQYI+ SLGLDEGELFNMYREVPSIT KA WAL YT+ L  PSF    K     
Sbjct: 147 AVHTHTFQYIVESLGLDEGELFNMYREVPSITDKAAWALAYTKHLDDPSFKTGTKETDQA 206

Query: 185 ILTRSLRF 192
            L   + F
Sbjct: 207 FLRDLIAF 214


>gi|300784783|ref|YP_003765074.1| ribonucleoside-diphosphate reductase beta chain [Amycolatopsis
           mediterranei U32]
 gi|299794297|gb|ADJ44672.1| ribonucleoside-diphosphate reductase beta chain [Amycolatopsis
           mediterranei U32]
          Length = 357

 Score =  288 bits (737), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 130/173 (75%), Positives = 150/173 (86%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           + TGL  I+ G  R+NVDDKRM+NAR+DVNQLLP+KY WAWEKYL+ CNNHWMPTEV MQ
Sbjct: 8   DATGLGEIEVGAARINVDDKRMINARADVNQLLPMKYKWAWEKYLAGCNNHWMPTEVAMQ 67

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D+ALWKS +GLT+DER M+KRNLGFFA++ESLVANNIVLA+YR ++NPECRQYLLRQAF
Sbjct: 68  ADIALWKSPDGLTEDERQMLKRNLGFFATAESLVANNIVLAVYRQITNPECRQYLLRQAF 127

Query: 123 EEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFH 175
           EEAVH+HTFQYI  SLGL EGELFNMYREVPSI+ K  WAL+YTQ L +P F 
Sbjct: 128 EEAVHTHTFQYICESLGLVEGELFNMYREVPSISDKDAWALKYTQNLENPDFE 180


>gi|302525965|ref|ZP_07278307.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. AA4]
 gi|302434860|gb|EFL06676.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. AA4]
          Length = 357

 Score =  287 bits (735), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 130/171 (76%), Positives = 150/171 (87%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
           TGL  I+ G  R+NVDDKRM+NAR+DVNQLLP+KY WAW+KYL+ACNNHWMPTEV MQ D
Sbjct: 10  TGLGEIEVGAARINVDDKRMINARADVNQLLPMKYRWAWDKYLAACNNHWMPTEVAMQAD 69

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           +ALWKS +GLT+DER M+KRNLGFFA++ESLVANNIVLA+YR ++NPECRQYLLRQAFEE
Sbjct: 70  IALWKSPDGLTEDERQMLKRNLGFFATAESLVANNIVLAVYRQITNPECRQYLLRQAFEE 129

Query: 125 AVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFH 175
           AVH+HTFQYI  SLGL EGELFNMYREVPSI+ K  WAL+YTQ L +P F 
Sbjct: 130 AVHTHTFQYICESLGLVEGELFNMYREVPSISDKDAWALKYTQNLENPDFE 180


>gi|90425007|ref|YP_533377.1| ribonucleotide-diphosphate reductase subunit beta [Rhodopseudomonas
           palustris BisB18]
 gi|90107021|gb|ABD89058.1| Ribonucleoside-diphosphate reductase [Rhodopseudomonas palustris
           BisB18]
          Length = 386

 Score =  287 bits (734), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 132/172 (76%), Positives = 150/172 (87%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           + TGL  I     RV++DDK M+N R+DVNQLLPLK+ WAWEKYL+ACNNHWMPTEV MQ
Sbjct: 37  DATGLGAIDRSGARVSIDDKAMINCRADVNQLLPLKHRWAWEKYLAACNNHWMPTEVSMQ 96

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D+ALW S++GLT+DER  IKRNLGFFA+SESLVANNIVLAIYRHL+NPECRQYLLRQAF
Sbjct: 97  ADIALWTSRDGLTEDERRAIKRNLGFFATSESLVANNIVLAIYRHLTNPECRQYLLRQAF 156

Query: 123 EEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           EEAVH+HTFQYI+ SLGLDEGELFNMYREVPSIT KA WAL++TQ L  P+F
Sbjct: 157 EEAVHTHTFQYIVESLGLDEGELFNMYREVPSITDKAAWALKHTQHLDDPTF 208


>gi|134097869|ref|YP_001103530.1| ribonucleotide-diphosphate reductase subunit beta
           [Saccharopolyspora erythraea NRRL 2338]
 gi|291007412|ref|ZP_06565385.1| ribonucleotide-diphosphate reductase subunit beta
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133910492|emb|CAM00605.1| ribonucleoside-diphosphate reductase, beta subunit
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 360

 Score =  285 bits (730), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 128/172 (74%), Positives = 151/172 (87%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
           ++GL  I     RV+V +K M+N+R+DVNQLLPLKYGWAWEKYL+ CNNHWMPTEV MQ 
Sbjct: 12  SSGLGEIDRDGGRVDVAEKAMINSRADVNQLLPLKYGWAWEKYLAGCNNHWMPTEVSMQA 71

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWKS++GLTDDER+M+KRNLGFFA++ESLVANNIVLA+YRH++NPECRQYLLRQAFE
Sbjct: 72  DIALWKSRDGLTDDERMMLKRNLGFFATAESLVANNIVLAVYRHITNPECRQYLLRQAFE 131

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFH 175
           EAVH+HTFQYI  SLGLDEGELFNMYRE+PSI+ K  WAL+YTQ L +P F 
Sbjct: 132 EAVHTHTFQYICESLGLDEGELFNMYREIPSISDKDAWALRYTQNLENPDFE 183


>gi|257055668|ref|YP_003133500.1| ribonucleotide reductase, beta subunit [Saccharomonospora viridis
           DSM 43017]
 gi|256585540|gb|ACU96673.1| ribonucleotide reductase, beta subunit [Saccharomonospora viridis
           DSM 43017]
          Length = 349

 Score =  284 bits (727), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 128/162 (79%), Positives = 146/162 (90%)

Query: 13  GEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
           G  RVNVDDK M+NAR+DVNQLLP+KYGWAWEKYL+ C+NHWMPTEV MQ D+ALWKS +
Sbjct: 10  GAARVNVDDKAMINARADVNQLLPMKYGWAWEKYLAGCDNHWMPTEVSMQADIALWKSPD 69

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
           GLTDDERLM+KRNLGFFA++ESLVANN+VLA+YRHL+NPECRQYLLRQAFEEAVH+HTFQ
Sbjct: 70  GLTDDERLMLKRNLGFFATAESLVANNLVLAVYRHLTNPECRQYLLRQAFEEAVHTHTFQ 129

Query: 133 YIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           YI  SLGLDEGELFN YREVPSI  K +WAL+YT+ L  P+F
Sbjct: 130 YICVSLGLDEGELFNAYREVPSIANKDSWALRYTRNLEDPNF 171


>gi|324998522|ref|ZP_08119634.1| ribonucleoside-diphosphate reductase beta chain [Pseudonocardia sp.
           P1]
          Length = 358

 Score =  284 bits (726), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 126/172 (73%), Positives = 149/172 (86%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           + TGL  I  G   ++ DDKRM+NAR+DVNQLLPLKY WAW+KYL+ C+NHWMPTEV MQ
Sbjct: 9   DTTGLGEIDRGAAPIDADDKRMINARADVNQLLPLKYHWAWDKYLAGCSNHWMPTEVAMQ 68

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D+ALW+S++GLTDDERLM+ RNLGFFA++ESLVANN+VLA+YRHL+NPECRQYLLRQ+F
Sbjct: 69  ADIALWRSRDGLTDDERLMLTRNLGFFATAESLVANNVVLAVYRHLTNPECRQYLLRQSF 128

Query: 123 EEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           EEAVH+HTFQY+  SLGLDEGELFN YR+VPSIT K  WAL+YTQ LS P F
Sbjct: 129 EEAVHTHTFQYVCESLGLDEGELFNAYRQVPSITDKDAWALRYTQALSDPDF 180


>gi|256377255|ref|YP_003100915.1| ribonucleoside-diphosphate reductase [Actinosynnema mirum DSM
           43827]
 gi|255921558|gb|ACU37069.1| Ribonucleoside-diphosphate reductase [Actinosynnema mirum DSM
           43827]
          Length = 358

 Score =  282 bits (722), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 129/169 (76%), Positives = 148/169 (87%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  I+ G  RV+VDDK M+NAR+DVNQLLPLKY WAWEKYL+ C NHWMPTEV MQ D+
Sbjct: 12  GLGEIERGAGRVHVDDKAMINARADVNQLLPLKYHWAWEKYLAGCANHWMPTEVSMQADI 71

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALW+S NGLT DER  IKRNLGFFA+SESLVANN+VLA+YR+++NPECRQYLLRQAFEEA
Sbjct: 72  ALWRSPNGLTADERHAIKRNLGFFATSESLVANNVVLAVYRNITNPECRQYLLRQAFEEA 131

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           VH+HTF+YI +SLGLDEGELFNMYREVPSIT KA WAL+YT++L  P F
Sbjct: 132 VHTHTFEYICSSLGLDEGELFNMYREVPSITDKAAWALKYTKSLEDPEF 180


>gi|284032753|ref|YP_003382684.1| Ribonucleoside-diphosphate reductase [Kribbella flavida DSM 17836]
 gi|283812046|gb|ADB33885.1| Ribonucleoside-diphosphate reductase [Kribbella flavida DSM 17836]
          Length = 354

 Score =  278 bits (712), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 131/175 (74%), Positives = 148/175 (84%), Gaps = 4/175 (2%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
            T   PI  G  RV V DK M+NAR+DVNQLLPLKY WAW+KYL+ACNNHWMPTEV MQ 
Sbjct: 2   TTTTPPIAVGATRVEVADKAMINARADVNQLLPLKYQWAWDKYLAACNNHWMPTEVSMQA 61

Query: 64  DLALWK----SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLR 119
           D+ALW+    +K+GLT+DERLM+KRNLGFFA++ESLVANNIVLA+YR LSNPECRQYLLR
Sbjct: 62  DIALWRRPAGAKDGLTEDERLMLKRNLGFFATAESLVANNIVLAVYRQLSNPECRQYLLR 121

Query: 120 QAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           QAFEEAVH+HTFQYI TSLGLDEGELFNMYREVPSI AK  WAL+YT+ L+   F
Sbjct: 122 QAFEEAVHTHTFQYICTSLGLDEGELFNMYREVPSIAAKDAWALKYTRHLTDGDF 176


>gi|254496936|ref|ZP_05109775.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
           drancourtii LLAP12]
 gi|254353845|gb|EET12541.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
           drancourtii LLAP12]
          Length = 369

 Score =  275 bits (702), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 120/188 (63%), Positives = 150/188 (79%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
           TG   I+ G  R++VDDKR++N R+D+NQL+P KY WAW+KYLSAC NHWMP E+ M  D
Sbjct: 17  TGYESIEMGAARIHVDDKRIINCRADLNQLVPFKYTWAWDKYLSACANHWMPNEISMSAD 76

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           +ALWK  NGLTDDERL+IKRNLGFF++++SLVANN+VLA+YRH++NPECRQYLLRQAFEE
Sbjct: 77  VALWKDPNGLTDDERLIIKRNLGFFSTADSLVANNLVLAVYRHITNPECRQYLLRQAFEE 136

Query: 125 AVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           A+H+H +QY+I SLGLDE E+FNMYRE+PS+  KA WAL YTQ+L   SFH        R
Sbjct: 137 ALHTHAYQYVIESLGLDEAEVFNMYREIPSVATKAAWALPYTQSLGDESFHTGTIENDQR 196

Query: 185 ILTRSLRF 192
           +L   + F
Sbjct: 197 LLRDLIAF 204


>gi|262373382|ref|ZP_06066661.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           junii SH205]
 gi|262313407|gb|EEY94492.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           junii SH205]
          Length = 427

 Score =  273 bits (699), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 116/189 (61%), Positives = 151/189 (79%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G +RV VDDK M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 82  GLEELEMGAQRVQVDDKAMINCRADLNQLVPFKYEWAWQKYLDGCANHWMPQEVNMNHDI 141

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS+NGLT+DER ++ R+LGFF++++SLVANN+VLAIYRH++NPECRQY+LRQAFEEA
Sbjct: 142 ALWKSENGLTEDERTIVMRSLGFFSTADSLVANNLVLAIYRHITNPECRQYILRQAFEEA 201

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMYRE+PS+  KA+W L+YTQ+LS P+FH        R+
Sbjct: 202 IHTHAYQYCIESLGMDEGEVFNMYREIPSVARKASWGLKYTQSLSDPTFHTGTPENDQRL 261

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 262 LRNLIAFYC 270


>gi|260551040|ref|ZP_05825245.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter
           sp. RUH2624]
 gi|260405988|gb|EEW99475.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter
           sp. RUH2624]
          Length = 427

 Score =  273 bits (697), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 116/189 (61%), Positives = 150/189 (79%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G +RV VDDK M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 82  GLEELEMGAQRVQVDDKAMINCRADLNQLVPFKYEWAWQKYLDGCANHWMPQEVNMNHDI 141

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS+NGLT+DER ++ R+LGFF++++SLVANN+VLAIYRH++NPECRQY+LRQAFEEA
Sbjct: 142 ALWKSENGLTEDERTIVMRSLGFFSTADSLVANNLVLAIYRHITNPECRQYILRQAFEEA 201

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMYRE+PS+  KA W L+YTQ+LS P+FH        R+
Sbjct: 202 IHTHAYQYCIESLGMDEGEVFNMYREIPSVARKAAWGLKYTQSLSDPTFHTGTPENDQRL 261

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 262 LRNLIAFYC 270


>gi|294840478|ref|ZP_06785161.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           sp. 6014059]
          Length = 427

 Score =  273 bits (697), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 116/189 (61%), Positives = 150/189 (79%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G +RV VDDK M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 82  GLEELEMGAQRVQVDDKAMINCRADLNQLVPFKYEWAWQKYLDGCANHWMPQEVNMNHDI 141

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS+NGLT+DER ++ R+LGFF++++SLVANN+VLAIYRH++NPECRQY+LRQAFEEA
Sbjct: 142 ALWKSENGLTEDERTIVMRSLGFFSTADSLVANNLVLAIYRHITNPECRQYILRQAFEEA 201

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMYRE+PS+  KA W L+YTQ+LS P+FH        R+
Sbjct: 202 IHTHAYQYCIESLGMDEGEVFNMYREIPSVARKAAWGLKYTQSLSDPTFHTGTPENDQRL 261

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 262 LRNLIAFYC 270


>gi|184157022|ref|YP_001845361.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii ACICU]
 gi|183208616|gb|ACC56014.1| Ribonucleotide reductase, beta subunit [Acinetobacter baumannii
           ACICU]
          Length = 427

 Score =  273 bits (697), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 116/189 (61%), Positives = 150/189 (79%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G +RV VDDK M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 82  GLEELEMGAQRVQVDDKAMINCRADLNQLVPFKYEWAWQKYLDGCANHWMPQEVNMNHDI 141

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS+NGLT+DER ++ R+LGFF++++SLVANN+VLAIYRH++NPECRQY+LRQAFEEA
Sbjct: 142 ALWKSENGLTEDERTIVMRSLGFFSTADSLVANNLVLAIYRHITNPECRQYILRQAFEEA 201

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMYRE+PS+  KA W L+YTQ+LS P+FH        R+
Sbjct: 202 IHTHAYQYCIESLGMDEGEVFNMYREIPSVARKAAWGLKYTQSLSDPTFHTGTPENDQRL 261

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 262 LRNLIAFYC 270


>gi|169797064|ref|YP_001714857.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AYE]
 gi|213156529|ref|YP_002318190.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii AB0057]
 gi|215484526|ref|YP_002326761.1| ribonucleotide-diphosphate reductase small chain [Acinetobacter
           baumannii AB307-0294]
 gi|239501302|ref|ZP_04660612.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AB900]
 gi|260555643|ref|ZP_05827863.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii ATCC 19606]
 gi|294839369|ref|ZP_06784052.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           sp. 6013113]
 gi|294859388|ref|ZP_06797157.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           sp. 6013150]
 gi|301345633|ref|ZP_07226374.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AB056]
 gi|301512780|ref|ZP_07238017.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AB058]
 gi|301596291|ref|ZP_07241299.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AB059]
 gi|169149991|emb|CAM87885.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii AYE]
 gi|193076530|gb|ABO11186.2| ribonucleoside-diphosphate reductase beta subunit [Acinetobacter
           baumannii ATCC 17978]
 gi|213055689|gb|ACJ40591.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii AB0057]
 gi|213987168|gb|ACJ57467.1| ribonucleotide-diphosphate reductase small chain [Acinetobacter
           baumannii AB307-0294]
 gi|260410554|gb|EEX03852.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii ATCC 19606]
          Length = 427

 Score =  273 bits (697), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 116/189 (61%), Positives = 150/189 (79%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G +RV VDDK M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 82  GLEELEMGAQRVQVDDKAMINCRADLNQLVPFKYEWAWQKYLDGCANHWMPQEVNMNHDI 141

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS+NGLT+DER ++ R+LGFF++++SLVANN+VLAIYRH++NPECRQY+LRQAFEEA
Sbjct: 142 ALWKSENGLTEDERTIVMRSLGFFSTADSLVANNLVLAIYRHITNPECRQYILRQAFEEA 201

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMYRE+PS+  KA W L+YTQ+LS P+FH        R+
Sbjct: 202 IHTHAYQYCIESLGMDEGEVFNMYREIPSVARKAAWGLKYTQSLSDPTFHTGTPENDQRL 261

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 262 LRNLIAFYC 270


>gi|169634186|ref|YP_001707922.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii SDF]
 gi|169152978|emb|CAP02026.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii]
          Length = 427

 Score =  272 bits (696), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 116/189 (61%), Positives = 150/189 (79%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G +RV VDDK M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 82  GLEELEMGAQRVQVDDKAMINCRADLNQLVPFKYEWAWQKYLDGCANHWMPQEVNMNHDI 141

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS+NGLT+DER ++ R+LGFF++++SLVANN+VLAIYRH++NPECRQY+LRQAFEEA
Sbjct: 142 ALWKSENGLTEDERTIVMRSLGFFSTADSLVANNLVLAIYRHITNPECRQYILRQAFEEA 201

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMYRE+PS+  KA W L+YTQ+LS P+FH        R+
Sbjct: 202 IHTHAYQYCIESLGMDEGEVFNMYREIPSVARKAAWGLKYTQSLSDPTFHTGTPENDQRL 261

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 262 LRNLIAFYC 270


>gi|126640804|ref|YP_001083788.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii ATCC 17978]
 gi|322506921|gb|ADX02375.1| nrdB [Acinetobacter baumannii 1656-2]
 gi|323516789|gb|ADX91170.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii TCDC-AB0715]
          Length = 361

 Score =  272 bits (695), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 116/189 (61%), Positives = 150/189 (79%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G +RV VDDK M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 16  GLEELEMGAQRVQVDDKAMINCRADLNQLVPFKYEWAWQKYLDGCANHWMPQEVNMNHDI 75

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS+NGLT+DER ++ R+LGFF++++SLVANN+VLAIYRH++NPECRQY+LRQAFEEA
Sbjct: 76  ALWKSENGLTEDERTIVMRSLGFFSTADSLVANNLVLAIYRHITNPECRQYILRQAFEEA 135

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMYRE+PS+  KA W L+YTQ+LS P+FH        R+
Sbjct: 136 IHTHAYQYCIESLGMDEGEVFNMYREIPSVARKAAWGLKYTQSLSDPTFHTGTPENDQRL 195

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 196 LRNLIAFYC 204


>gi|293609145|ref|ZP_06691448.1| ribonucleoside-diphosphate reductase [Acinetobacter sp. SH024]
 gi|292829718|gb|EFF88080.1| ribonucleoside-diphosphate reductase [Acinetobacter sp. SH024]
          Length = 427

 Score =  272 bits (695), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 116/189 (61%), Positives = 150/189 (79%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G +RV VDDK M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 82  GLEELEMGAQRVQVDDKAMINCRADLNQLVPFKYEWAWQKYLDGCANHWMPQEVNMNHDI 141

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS+NGLT+DER ++ R+LGFF++++SLVANN+VLAIYRH++NPECRQY+LRQAFEEA
Sbjct: 142 ALWKSENGLTEDERTIVMRSLGFFSTADSLVANNLVLAIYRHITNPECRQYILRQAFEEA 201

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMYREVPS+  KA W L+YTQ+L+ P+FH        R+
Sbjct: 202 IHTHAYQYCIESLGMDEGEVFNMYREVPSVARKAAWGLKYTQSLTDPNFHTGTPENDQRL 261

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 262 LRNLIAFYC 270


>gi|325121074|gb|ADY80597.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 370

 Score =  271 bits (693), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 116/189 (61%), Positives = 150/189 (79%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G +RV VDDK M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 25  GLEELEMGAQRVQVDDKAMINCRADLNQLVPFKYEWAWQKYLDGCANHWMPQEVNMNHDI 84

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS+NGLT+DER ++ R+LGFF++++SLVANN+VLAIYRH++NPECRQY+LRQAFEEA
Sbjct: 85  ALWKSENGLTEDERTIVMRSLGFFSTADSLVANNLVLAIYRHITNPECRQYILRQAFEEA 144

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMYREVPS+  KA W L+YTQ+L+ P+FH        R+
Sbjct: 145 IHTHAYQYCIESLGMDEGEVFNMYREVPSVARKAAWGLKYTQSLTDPNFHTGTPENDQRL 204

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 205 LRNLIAFYC 213


>gi|262280153|ref|ZP_06057938.1| ribonucleoside-diphosphate reductase beta subunit [Acinetobacter
           calcoaceticus RUH2202]
 gi|262260504|gb|EEY79237.1| ribonucleoside-diphosphate reductase beta subunit [Acinetobacter
           calcoaceticus RUH2202]
          Length = 427

 Score =  271 bits (692), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 116/189 (61%), Positives = 150/189 (79%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G +RV VDDK M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 82  GLEELEMGAQRVQVDDKAMINCRADLNQLVPFKYEWAWQKYLDGCANHWMPQEVNMNLDI 141

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS+NGLT+DER ++ R+LGFF++++SLVANN+VLAIYRH++NPECRQY+LRQAFEEA
Sbjct: 142 ALWKSENGLTEDERTIVMRSLGFFSTADSLVANNLVLAIYRHITNPECRQYILRQAFEEA 201

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMYREVPS+  KA W L+YTQ+L+ P+FH        R+
Sbjct: 202 IHTHAYQYCIESLGMDEGEVFNMYREVPSVARKAAWGLKYTQSLTDPNFHTGTPENDQRL 261

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 262 LRNLIAFYC 270


>gi|226953559|ref|ZP_03824023.1| ribonucleotide reductase, beta subunit [Acinetobacter sp. ATCC
           27244]
 gi|294649451|ref|ZP_06726876.1| ribonucleotide-diphosphate reductase beta subunit [Acinetobacter
           haemolyticus ATCC 19194]
 gi|226835696|gb|EEH68079.1| ribonucleotide reductase, beta subunit [Acinetobacter sp. ATCC
           27244]
 gi|292824656|gb|EFF83434.1| ribonucleotide-diphosphate reductase beta subunit [Acinetobacter
           haemolyticus ATCC 19194]
          Length = 427

 Score =  270 bits (691), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 117/189 (61%), Positives = 149/189 (78%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G +RV VDDK M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 82  GLEELEMGAQRVQVDDKAMINCRADLNQLVPFKYEWAWQKYLDGCANHWMPQEVNMNHDI 141

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS+NGLT+DER +I R+LGFF++++SLVANN+VLAIYRH++NPECRQY+LRQAFEEA
Sbjct: 142 ALWKSENGLTEDERTIIMRSLGFFSTADSLVANNLVLAIYRHITNPECRQYILRQAFEEA 201

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMYREVPS+  KA W L+YTQ+LS P+FH         +
Sbjct: 202 IHTHAYQYCIESLGMDEGEVFNMYREVPSVARKAAWGLKYTQSLSDPTFHTGTPENDQIL 261

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 262 LRNLIAFYC 270


>gi|299771426|ref|YP_003733452.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           sp. DR1]
 gi|298701514|gb|ADI92079.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           sp. DR1]
          Length = 427

 Score =  270 bits (691), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 116/189 (61%), Positives = 150/189 (79%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G +RV VDDK M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 82  GLEELEMGAQRVQVDDKAMINCRADLNQLVPFKYEWAWQKYLDGCANHWMPQEVNMNLDI 141

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS+NGLT+DER ++ R+LGFF++++SLVANN+VLAIYRH++NPECRQY+LRQAFEEA
Sbjct: 142 ALWKSENGLTEDERTIVMRSLGFFSTADSLVANNLVLAIYRHITNPECRQYILRQAFEEA 201

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMYREVPS+  KA W L+YTQ+L+ P+FH        R+
Sbjct: 202 IHTHAYQYCIESLGMDEGEVFNMYREVPSVARKAAWGLKYTQSLTDPNFHTGTPENDQRL 261

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 262 LRNLIAFYC 270


>gi|261855609|ref|YP_003262892.1| ribonucleoside-diphosphate reductase [Halothiobacillus neapolitanus
           c2]
 gi|261836078|gb|ACX95845.1| Ribonucleoside-diphosphate reductase [Halothiobacillus neapolitanus
           c2]
          Length = 398

 Score =  270 bits (689), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 124/171 (72%), Positives = 144/171 (84%), Gaps = 1/171 (0%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
           TGL  I  G  RV+V  KR++NA +DVNQLLP+KY WAWEKYL+ CNNHWMPTEV MQ D
Sbjct: 51  TGLEGIAQGAGRVDVSAKRIINATADVNQLLPMKYTWAWEKYLAGCNNHWMPTEVSMQAD 110

Query: 65  LALWKSKNG-LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           +ALWK ++G LT DER MI RNLGFFA++ESLVANNIVLAIY+ ++NPECRQYLLRQAFE
Sbjct: 111 IALWKGRDGGLTADERAMIMRNLGFFATAESLVANNIVLAIYKQVTNPECRQYLLRQAFE 170

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           EAVH+HTFQYI+ SLGL EGELFNMYRE+PSITAK  WAL+YT+ L+   F
Sbjct: 171 EAVHTHTFQYIVESLGLAEGELFNMYREIPSITAKDEWALKYTKNLADGDF 221


>gi|300113307|ref|YP_003759882.1| ribonucleoside-diphosphate reductase [Nitrosococcus watsonii C-113]
 gi|299539244|gb|ADJ27561.1| Ribonucleoside-diphosphate reductase [Nitrosococcus watsonii C-113]
          Length = 412

 Score =  269 bits (688), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 116/187 (62%), Positives = 147/187 (78%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           G+  I+ G  R+ VDDKR++N R+D+NQL+P KY WAWEKYLS C NHWMP E+ M  D+
Sbjct: 66  GVEDIEMGAARIQVDDKRIINCRADLNQLVPFKYHWAWEKYLSGCANHWMPQEINMNADI 125

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS +GLT+DER +IKRNLGFF +++SLVANN+VLA+YRH++NPECRQYLLRQAFEEA
Sbjct: 126 ALWKSADGLTEDERTIIKRNLGFFVTADSLVANNLVLAVYRHITNPECRQYLLRQAFEEA 185

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           VH+H +QY + SLGLDEGE+FNMYREVP++  KA WAL +TQ L+ P FH        ++
Sbjct: 186 VHTHAYQYCVESLGLDEGEIFNMYREVPAVARKAEWALPFTQHLADPQFHTGTAENDQKL 245

Query: 186 LTRSLRF 192
           L   + F
Sbjct: 246 LRELIAF 252


>gi|77165986|ref|YP_344511.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosococcus
           oceani ATCC 19707]
 gi|254436303|ref|ZP_05049809.1| ribonucleoside-diphosphate reductase, beta subunit [Nitrosococcus
           oceani AFC27]
 gi|76884300|gb|ABA58981.1| Ribonucleoside-diphosphate reductase [Nitrosococcus oceani ATCC
           19707]
 gi|207087993|gb|EDZ65266.1| ribonucleoside-diphosphate reductase, beta subunit [Nitrosococcus
           oceani AFC27]
          Length = 412

 Score =  269 bits (687), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 116/187 (62%), Positives = 147/187 (78%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           G+  I+ G  R+ VDDKR++N R+D+NQL+P KY WAWEKYLS C NHWMP E+ M  D+
Sbjct: 66  GVEDIEMGAARIQVDDKRIINCRADLNQLVPFKYHWAWEKYLSGCANHWMPQEINMNADI 125

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS +GLT+DER +IKRNLGFF +++SLVANN+VLA+YRH++NPECRQYLLRQAFEEA
Sbjct: 126 ALWKSADGLTEDERTIIKRNLGFFVTADSLVANNLVLAVYRHITNPECRQYLLRQAFEEA 185

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           VH+H +QY + SLGLDEGE+FNMYREVP++  KA WAL +TQ L+ P FH        ++
Sbjct: 186 VHTHAYQYCVESLGLDEGEIFNMYREVPAVARKAEWALPFTQHLADPQFHTGTAENDQKL 245

Query: 186 LTRSLRF 192
           L   + F
Sbjct: 246 LRELIAF 252


>gi|270156779|ref|ZP_06185436.1| ribonucleotide-diphosphate reductase beta subunit [Legionella
           longbeachae D-4968]
 gi|289164772|ref|YP_003454910.1| ribonucleoside-diphosphate reductase, beta subunit [Legionella
           longbeachae NSW150]
 gi|269988804|gb|EEZ95058.1| ribonucleotide-diphosphate reductase beta subunit [Legionella
           longbeachae D-4968]
 gi|288857945|emb|CBJ11805.1| putative ribonucleoside-diphosphate reductase, beta subunit
           [Legionella longbeachae NSW150]
          Length = 366

 Score =  268 bits (685), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 115/192 (59%), Positives = 151/192 (78%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +   TG   ++ G  R++VDDKR++N R+D+NQL+P KY WAW+KYL+AC NHWMP E+ 
Sbjct: 13  LTGATGYESLEMGAARIHVDDKRIINCRADLNQLVPFKYKWAWDKYLTACANHWMPNEIS 72

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK  NGLT+ ERL+IKRNLGFF++++SLVANN+VLA+YRH++NPECRQYLLRQ
Sbjct: 73  MSADVALWKDPNGLTEAERLIIKRNLGFFSTADSLVANNLVLAVYRHITNPECRQYLLRQ 132

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QY+I SLGLDE E+FNMYRE+PS+  KA WAL YTQ+L+  +FH     
Sbjct: 133 AFEEALHTHAYQYVIESLGLDEAEVFNMYREIPSVATKAAWALPYTQSLADETFHTGTVE 192

Query: 181 RRSRILTRSLRF 192
              R+L   + F
Sbjct: 193 NDQRLLRDLIAF 204


>gi|292490774|ref|YP_003526213.1| ribonucleoside-diphosphate reductase [Nitrosococcus halophilus Nc4]
 gi|291579369|gb|ADE13826.1| Ribonucleoside-diphosphate reductase [Nitrosococcus halophilus Nc4]
          Length = 415

 Score =  268 bits (684), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 115/187 (61%), Positives = 147/187 (78%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           G+  I+ G  R+ VDDKR++N R+D+NQL+P KY WAWEKYL+ C NHWMP E+ M  D+
Sbjct: 69  GIENIEMGAARIQVDDKRIINCRADLNQLVPFKYHWAWEKYLNGCANHWMPQEINMNADI 128

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS +GLT+DER +IKRNLGFF +++SLVANN+VLA+YRH++NPECRQYLLRQAFEEA
Sbjct: 129 ALWKSADGLTEDERTIIKRNLGFFVTADSLVANNLVLAVYRHITNPECRQYLLRQAFEEA 188

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           VH+H +QY + SLGLDEGE+FNMYREVP++  KA WAL +TQ L+ P FH        ++
Sbjct: 189 VHTHAYQYCVESLGLDEGEIFNMYREVPAVARKAEWALPFTQYLADPQFHTGTDENDQKL 248

Query: 186 LTRSLRF 192
           L   + F
Sbjct: 249 LRELIAF 255


>gi|53804295|ref|YP_114081.1| ribonucleotide-diphosphate reductase subunit beta [Methylococcus
           capsulatus str. Bath]
 gi|53758056|gb|AAU92347.1| ribonucleoside-diphosphate reductase, beta subunit [Methylococcus
           capsulatus str. Bath]
          Length = 403

 Score =  267 bits (682), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 115/188 (61%), Positives = 150/188 (79%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
           TGL  I+ G +R+ VDDKR++N R+D+NQL+P KY WAW+KYL AC NHWMP E+ M  D
Sbjct: 56  TGLENIEMGARRIQVDDKRIINCRADLNQLVPFKYQWAWQKYLDACANHWMPQEINMNAD 115

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           +ALWKS +GLT DER++IKRNLGFF++++SLVANN+VLA+YRH++NPECRQYLLRQAFEE
Sbjct: 116 IALWKSADGLTPDERIIIKRNLGFFSTADSLVANNLVLAVYRHITNPECRQYLLRQAFEE 175

Query: 125 AVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           A+H+H +QY++ SLGLDEGE+FNMYREVP++  KA WAL +TQ L+ P F         +
Sbjct: 176 ALHTHAYQYVVESLGLDEGEVFNMYREVPAVARKAEWALPFTQYLADPYFKTGTPENDQK 235

Query: 185 ILTRSLRF 192
           +L   + F
Sbjct: 236 LLRELIAF 243


>gi|262369327|ref|ZP_06062655.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter
           johnsonii SH046]
 gi|262315395|gb|EEY96434.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter
           johnsonii SH046]
          Length = 427

 Score =  267 bits (682), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 115/189 (60%), Positives = 148/189 (78%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G +RV VDDK M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 82  GLEELEMGAQRVQVDDKAMINCRADLNQLVPFKYEWAWQKYLDGCANHWMPQEVNMNHDI 141

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS+NGLT+DER ++ R+LGFF++++SLVANN+VLAIYRH++NPECRQY+LRQAFEEA
Sbjct: 142 ALWKSENGLTEDERTIVMRSLGFFSTADSLVANNLVLAIYRHITNPECRQYILRQAFEEA 201

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMYREVPS+  KA W L+YTQ+LS P+F          +
Sbjct: 202 IHTHAYQYCIESLGMDEGEVFNMYREVPSVARKAAWGLKYTQSLSDPTFQTGTPENDQIL 261

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 262 LRNLIAFYC 270


>gi|220935777|ref|YP_002514676.1| Ribonucleoside-diphosphate reductase [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219997087|gb|ACL73689.1| Ribonucleoside-diphosphate reductase [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 408

 Score =  267 bits (682), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 113/190 (59%), Positives = 149/190 (78%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
            NTGL  I+ G +R+ VDDK+++N R+D+NQL+P KY WAW+KYL  C NHWMP E+ M 
Sbjct: 59  GNTGLEDIELGAERIRVDDKKIINCRADLNQLVPFKYQWAWQKYLDGCANHWMPQEINMN 118

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D+ALWK  NGLT+DER ++KRNLGFF++++SLVANN+VLA+YRH++NPECRQYLLRQAF
Sbjct: 119 ADIALWKDPNGLTEDERTIVKRNLGFFSTADSLVANNLVLAVYRHITNPECRQYLLRQAF 178

Query: 123 EEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRR 182
           EEA+H+H +QY + SLGLDEGE+FNMYREVP++  KA WAL +T+ L+ P FH       
Sbjct: 179 EEALHTHAYQYCVESLGLDEGEIFNMYREVPAVARKAEWALPFTRYLADPDFHTGTPEND 238

Query: 183 SRILTRSLRF 192
            ++L   + F
Sbjct: 239 QKLLRELIAF 248


>gi|288941383|ref|YP_003443623.1| Ribonucleoside-diphosphate reductase [Allochromatium vinosum DSM
           180]
 gi|288896755|gb|ADC62591.1| Ribonucleoside-diphosphate reductase [Allochromatium vinosum DSM
           180]
          Length = 458

 Score =  266 bits (681), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 115/188 (61%), Positives = 148/188 (78%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
           TGL  +  G  RV VDDKR++N R+D+NQL+P KY WAW+KYL AC NHWMP E+ M  D
Sbjct: 111 TGLESLAMGASRVRVDDKRIINCRADLNQLVPFKYDWAWQKYLDACANHWMPQEISMNAD 170

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           LALWK  +GLT+DERL++KRNLGFF++++SLVANN+VLA+YRH++NPECRQYLLRQAFEE
Sbjct: 171 LALWKDPHGLTEDERLIVKRNLGFFSTADSLVANNLVLAVYRHITNPECRQYLLRQAFEE 230

Query: 125 AVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           A+H+H +QY++ SLGLDEGE+FNMYREVP++  KA WAL +TQ L+ P F         +
Sbjct: 231 ALHTHAYQYVVESLGLDEGEIFNMYREVPAVARKAEWALPFTQHLADPHFQTGTPENDQK 290

Query: 185 ILTRSLRF 192
           +L   + F
Sbjct: 291 LLRELVAF 298


>gi|50083944|ref|YP_045454.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           sp. ADP1]
 gi|49529920|emb|CAG67632.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           sp. ADP1]
          Length = 427

 Score =  266 bits (681), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 115/190 (60%), Positives = 147/190 (77%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
            GL  I+ G  RV VDDK M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D
Sbjct: 81  AGLQEIETGAARVQVDDKAMINCRADLNQLVPFKYEWAWQKYLDGCANHWMPQEVNMNHD 140

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           +ALWKS+NGLT+DER+++KRNLGFF++++SLVANN+VLAIYR ++NPECRQY+LRQAFEE
Sbjct: 141 IALWKSENGLTEDERVIVKRNLGFFSTADSLVANNLVLAIYRLITNPECRQYILRQAFEE 200

Query: 125 AVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           A+H+H +QY I SLG+DEGE+FNMY E+PS+  KA W L+YTQ+LS P F         +
Sbjct: 201 AIHTHAYQYCIESLGMDEGEIFNMYHEIPSVARKAAWGLKYTQSLSDPKFETGTPETDQQ 260

Query: 185 ILTRSLRFLC 194
           +L   + F C
Sbjct: 261 LLRNLIAFYC 270


>gi|262376783|ref|ZP_06070011.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           lwoffii SH145]
 gi|262308493|gb|EEY89628.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           lwoffii SH145]
          Length = 427

 Score =  266 bits (681), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 115/189 (60%), Positives = 148/189 (78%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G +RV VDDK M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 82  GLEELEMGAQRVQVDDKAMINCRADLNQLVPFKYEWAWQKYLDGCANHWMPQEVNMNHDI 141

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS+NGLT+DER ++ R+LGFF++++SLVANN+VLAIYRH++NPECRQY+LRQAFEEA
Sbjct: 142 ALWKSENGLTEDERTIVMRSLGFFSTADSLVANNLVLAIYRHITNPECRQYILRQAFEEA 201

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMYREVPS+  KA W L+YTQ+LS P+F          +
Sbjct: 202 IHTHAYQYCIESLGMDEGEVFNMYREVPSVARKAAWGLKYTQSLSDPTFKTGTPENDQIL 261

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 262 LRNLIAFYC 270


>gi|255318309|ref|ZP_05359544.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           radioresistens SK82]
 gi|262379054|ref|ZP_06072210.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           radioresistens SH164]
 gi|255304621|gb|EET83803.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           radioresistens SK82]
 gi|262298511|gb|EEY86424.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           radioresistens SH164]
          Length = 427

 Score =  266 bits (680), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 115/189 (60%), Positives = 148/189 (78%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G +RV VDDK M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 82  GLEELEMGAQRVQVDDKAMINCRADLNQLVPFKYEWAWQKYLDGCANHWMPQEVNMNHDI 141

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS+NGLT+DER ++ R+LGFF++++SLVANN+VLAIYRH++NPECRQY+LRQAFEEA
Sbjct: 142 ALWKSENGLTEDERTIVMRSLGFFSTADSLVANNLVLAIYRHITNPECRQYILRQAFEEA 201

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMYREVPS+  KA W L+YTQ+LS P+F          +
Sbjct: 202 IHTHAYQYCIESLGMDEGEVFNMYREVPSVARKAAWGLKYTQSLSDPTFKTGTPENDQIL 261

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 262 LRNLIAFYC 270


>gi|52842002|ref|YP_095801.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
 gi|52629113|gb|AAU27854.1| ribonucleoside-diphosphate reductase, beta subunit [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
          Length = 381

 Score =  266 bits (679), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 115/188 (61%), Positives = 151/188 (80%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
           TGL  ++ G  R++VDDK+++N R+D+NQL+P KY WAW+KYL+AC NHWMP E+ M  D
Sbjct: 32  TGLETLEMGAARIHVDDKQIINCRADLNQLVPFKYKWAWDKYLTACANHWMPNEISMSAD 91

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           +ALWK   GLT+DERL+IKRNLGFF++++SLVANN+VLA+YRH++NPECRQYLLRQAFEE
Sbjct: 92  VALWKDPYGLTEDERLIIKRNLGFFSTADSLVANNLVLAVYRHITNPECRQYLLRQAFEE 151

Query: 125 AVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           A+H+H +QYII SLGLDE E+FNMYRE+PS++ KA WAL +TQ+L   +FH        R
Sbjct: 152 ALHTHAYQYIIESLGLDEAEVFNMYREIPSVSRKAVWALPFTQSLGDETFHTGTPENDQR 211

Query: 185 ILTRSLRF 192
           +L   + F
Sbjct: 212 LLRDLIAF 219


>gi|54294662|ref|YP_127077.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
           pneumophila str. Lens]
 gi|53754494|emb|CAH15978.1| hypothetical protein lpl1739 [Legionella pneumophila str. Lens]
          Length = 367

 Score =  266 bits (679), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 115/188 (61%), Positives = 151/188 (80%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
           TGL  ++ G  R++VDDK+++N R+D+NQL+P KY WAW+KYL+AC NHWMP E+ M  D
Sbjct: 18  TGLEALEMGAARIHVDDKQIINCRADLNQLVPFKYKWAWDKYLTACANHWMPNEISMSAD 77

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           +ALWK   GLT+DERL+IKRNLGFF++++SLVANN+VLA+YRH++NPECRQYLLRQAFEE
Sbjct: 78  VALWKDPYGLTEDERLIIKRNLGFFSTADSLVANNLVLAVYRHITNPECRQYLLRQAFEE 137

Query: 125 AVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           A+H+H +QYII SLGLDE E+FNMYRE+PS++ KA WAL +TQ+L   +FH        R
Sbjct: 138 ALHTHAYQYIIESLGLDEAEVFNMYREIPSVSRKAVWALPFTQSLGDETFHTGTPENDQR 197

Query: 185 ILTRSLRF 192
           +L   + F
Sbjct: 198 LLRDLIAF 205


>gi|148359319|ref|YP_001250526.1| ribonucleoside-diphosphate reductase subunit beta [Legionella
           pneumophila str. Corby]
 gi|296107366|ref|YP_003619066.1| ribonucleoside-diphosphate reductase beta chain [Legionella
           pneumophila 2300/99 Alcoy]
 gi|148281092|gb|ABQ55180.1| ribonucleoside-diphosphate reductase, beta subunit [Legionella
           pneumophila str. Corby]
 gi|295649267|gb|ADG25114.1| ribonucleoside-diphosphate reductase beta chain [Legionella
           pneumophila 2300/99 Alcoy]
 gi|307610475|emb|CBX00047.1| hypothetical protein LPW_18021 [Legionella pneumophila 130b]
          Length = 367

 Score =  266 bits (679), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 115/188 (61%), Positives = 151/188 (80%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
           TGL  ++ G  R++VDDK+++N R+D+NQL+P KY WAW+KYL+AC NHWMP E+ M  D
Sbjct: 18  TGLETLEMGAARIHVDDKQIINCRADLNQLVPFKYKWAWDKYLTACANHWMPNEISMSAD 77

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           +ALWK   GLT+DERL+IKRNLGFF++++SLVANN+VLA+YRH++NPECRQYLLRQAFEE
Sbjct: 78  VALWKDPYGLTEDERLIIKRNLGFFSTADSLVANNLVLAVYRHITNPECRQYLLRQAFEE 137

Query: 125 AVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           A+H+H +QYII SLGLDE E+FNMYRE+PS++ KA WAL +TQ+L   +FH        R
Sbjct: 138 ALHTHAYQYIIESLGLDEAEVFNMYREIPSVSRKAVWALPFTQSLGDETFHTGTPENDQR 197

Query: 185 ILTRSLRF 192
           +L   + F
Sbjct: 198 LLRDLIAF 205


>gi|54297688|ref|YP_124057.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
           pneumophila str. Paris]
 gi|53751473|emb|CAH12891.1| hypothetical protein lpp1739 [Legionella pneumophila str. Paris]
          Length = 367

 Score =  266 bits (679), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 115/188 (61%), Positives = 151/188 (80%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
           TGL  ++ G  R++VDDK+++N R+D+NQL+P KY WAW+KYL+AC NHWMP E+ M  D
Sbjct: 18  TGLETLEMGAARIHVDDKQIINCRADLNQLVPFKYKWAWDKYLTACANHWMPNEISMSAD 77

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           +ALWK   GLT+DERL+IKRNLGFF++++SLVANN+VLA+YRH++NPECRQYLLRQAFEE
Sbjct: 78  VALWKDPYGLTEDERLIIKRNLGFFSTADSLVANNLVLAVYRHITNPECRQYLLRQAFEE 137

Query: 125 AVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           A+H+H +QYII SLGLDE E+FNMYRE+PS++ KA WAL +TQ+L   +FH        R
Sbjct: 138 ALHTHAYQYIIESLGLDEAEVFNMYREIPSVSRKAVWALPFTQSLGDETFHTGTPENDQR 197

Query: 185 ILTRSLRF 192
           +L   + F
Sbjct: 198 LLRDLIAF 205


>gi|110833571|ref|YP_692430.1| ribonucleotide-diphosphate reductase subunit beta [Alcanivorax
           borkumensis SK2]
 gi|110646682|emb|CAL16158.1| ribonucleoside reductase, beta subunit [Alcanivorax borkumensis
           SK2]
          Length = 430

 Score =  262 bits (669), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 112/189 (59%), Positives = 144/189 (76%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           G++ ++    RV VDDKRM+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  DL
Sbjct: 84  GVAELEGAAGRVEVDDKRMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMNADL 143

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWK  +GLTDDER ++KRNLGFFA+++SLVANN+VLAIYR ++NPECRQY+LRQ+FEEA
Sbjct: 144 ALWKKADGLTDDERRIVKRNLGFFATADSLVANNLVLAIYRLITNPECRQYILRQSFEEA 203

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMY+E+PS+  KA W +QYT+ LS P F          +
Sbjct: 204 IHTHAYQYCIESLGMDEGEIFNMYQEIPSVAKKAQWGIQYTRDLSDPEFTTGTPETDKAL 263

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 264 LENLIAFYC 272


>gi|289208615|ref|YP_003460681.1| ribonucleoside-diphosphate reductase [Thioalkalivibrio sp. K90mix]
 gi|288944246|gb|ADC71945.1| Ribonucleoside-diphosphate reductase [Thioalkalivibrio sp. K90mix]
          Length = 412

 Score =  261 bits (666), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 110/189 (58%), Positives = 147/189 (77%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
            TGL  ++ G +R+ VDDK+++N  +D+NQL+P KY WAW+KYL  C NHWMP E+ M  
Sbjct: 64  GTGLEDLEMGAERIRVDDKKIINCHADLNQLVPFKYKWAWQKYLDGCANHWMPQEINMNA 123

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWK  NGLT+DER ++KRNLGFF++++SLVANN+VLA+YRH++NPECRQYLLRQAFE
Sbjct: 124 DIALWKDPNGLTEDERTIVKRNLGFFSTADSLVANNLVLAVYRHITNPECRQYLLRQAFE 183

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QY + SLGLDEGE+FNMYREVPS+  KA WAL +T+ L+ P+F         
Sbjct: 184 EALHTHAYQYCVESLGLDEGEIFNMYREVPSVATKAEWALPFTKHLADPNFRTGTPEADQ 243

Query: 184 RILTRSLRF 192
           ++L   + F
Sbjct: 244 KLLRELIAF 252


>gi|254429337|ref|ZP_05043044.1| ribonucleoside-diphosphate reductase, beta subunit [Alcanivorax sp.
           DG881]
 gi|196195506|gb|EDX90465.1| ribonucleoside-diphosphate reductase, beta subunit [Alcanivorax sp.
           DG881]
          Length = 355

 Score =  260 bits (665), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 111/189 (58%), Positives = 144/189 (76%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           G++ ++    RV VDDKRM+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  DL
Sbjct: 9   GVAELEGASGRVEVDDKRMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMNADL 68

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWK  +GLTDDER ++KRNLGFF++++SLVANN+VLAIYR ++NPECRQY+LRQ+FEEA
Sbjct: 69  ALWKKADGLTDDERRIVKRNLGFFSTADSLVANNLVLAIYRLITNPECRQYILRQSFEEA 128

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMY+E+PS+  KA W +QYT+ LS P F          +
Sbjct: 129 IHTHAYQYCIESLGMDEGEIFNMYQEIPSVAKKAQWGIQYTRDLSDPEFTTGTVETDKAL 188

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 189 LENLIAFYC 197


>gi|29654845|ref|NP_820537.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
           burnetii RSA 493]
 gi|154705923|ref|YP_001423853.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
           burnetii Dugway 5J108-111]
 gi|161831080|ref|YP_001597389.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
           burnetii RSA 331]
 gi|29542113|gb|AAO91051.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii
           RSA 493]
 gi|154355209|gb|ABS76671.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii
           Dugway 5J108-111]
 gi|161762947|gb|ABX78589.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
           burnetii RSA 331]
          Length = 401

 Score =  260 bits (664), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 113/188 (60%), Positives = 148/188 (78%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
           TGL  ++ G  R+ VDDK+++N  +D+NQL+P KY WAW+KYLS C NHWMP E+ M  D
Sbjct: 53  TGLEQLEMGAARIRVDDKKIINCHADLNQLVPFKYTWAWQKYLSGCANHWMPNEINMTAD 112

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           +ALWK  NGLT DER ++KR+LGFF++++SLVANN+VLAIYRH++NPECRQYLLRQAFEE
Sbjct: 113 IALWKDPNGLTADERTIVKRSLGFFSTADSLVANNLVLAIYRHITNPECRQYLLRQAFEE 172

Query: 125 AVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           A+H+H +QYII SLGLDE E+FNMYRE+P+++ KA WAL YTQ+L+ P+F         R
Sbjct: 173 ALHTHAYQYIIESLGLDEAEVFNMYRELPAVSKKAVWALPYTQSLADPNFKTGTPEDDRR 232

Query: 185 ILTRSLRF 192
           +L   + F
Sbjct: 233 LLRDLIAF 240


>gi|212212091|ref|YP_002303027.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
           burnetii CbuG_Q212]
 gi|212010501|gb|ACJ17882.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii
           CbuG_Q212]
          Length = 401

 Score =  260 bits (664), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 113/188 (60%), Positives = 148/188 (78%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
           TGL  ++ G  R+ VDDK+++N  +D+NQL+P KY WAW+KYLS C NHWMP E+ M  D
Sbjct: 53  TGLEQLEMGAARIRVDDKKIINCHADLNQLVPFKYTWAWQKYLSGCANHWMPNEINMTAD 112

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           +ALWK  NGLT DER ++KR+LGFF++++SLVANN+VLAIYRH++NPECRQYLLRQAFEE
Sbjct: 113 IALWKDPNGLTADERTIVKRSLGFFSTADSLVANNLVLAIYRHITNPECRQYLLRQAFEE 172

Query: 125 AVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           A+H+H +QYII SLGLDE E+FNMYRE+P+++ KA WAL YTQ+L+ P+F         R
Sbjct: 173 ALHTHAYQYIIESLGLDEAEVFNMYRELPAVSKKAVWALPYTQSLADPNFKTGTPEDDRR 232

Query: 185 ILTRSLRF 192
           +L   + F
Sbjct: 233 LLRDLIAF 240


>gi|153208286|ref|ZP_01946665.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
           burnetii 'MSU Goat Q177']
 gi|165919229|ref|ZP_02219315.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
           burnetii RSA 334]
 gi|212219268|ref|YP_002306055.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
           burnetii CbuK_Q154]
 gi|120576070|gb|EAX32694.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
           burnetii 'MSU Goat Q177']
 gi|165917090|gb|EDR35694.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
           burnetii RSA 334]
 gi|212013530|gb|ACJ20910.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii
           CbuK_Q154]
          Length = 401

 Score =  260 bits (664), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 113/188 (60%), Positives = 148/188 (78%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
           TGL  ++ G  R+ VDDK+++N  +D+NQL+P KY WAW+KYLS C NHWMP E+ M  D
Sbjct: 53  TGLEQLEMGAARIRVDDKKIINCHADLNQLVPFKYTWAWQKYLSGCANHWMPNEINMTAD 112

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           +ALWK  NGLT DER ++KR+LGFF++++SLVANN+VLAIYRH++NPECRQYLLRQAFEE
Sbjct: 113 IALWKDPNGLTADERTIVKRSLGFFSTADSLVANNLVLAIYRHITNPECRQYLLRQAFEE 172

Query: 125 AVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           A+H+H +QYII SLGLDE E+FNMYRE+P+++ KA WAL YTQ+L+ P+F         R
Sbjct: 173 ALHTHAYQYIIESLGLDEAEVFNMYRELPAVSKKAVWALPYTQSLADPNFKTGTPEDDRR 232

Query: 185 ILTRSLRF 192
           +L   + F
Sbjct: 233 LLRDLIAF 240


>gi|327480258|gb|AEA83568.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           stutzeri DSM 4166]
          Length = 415

 Score =  259 bits (662), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 110/189 (58%), Positives = 148/189 (78%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL+ ++    RV VD+KRM+NAR+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 69  GLNELEGEAARVRVDEKRMINARADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMNADI 128

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKSK+GL++DER ++KRNLGFF++++SLVANN+VLA YR ++NPECRQY+LRQAFEEA
Sbjct: 129 ALWKSKDGLSEDERRIVKRNLGFFSTADSLVANNLVLATYRLITNPECRQYILRQAFEEA 188

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMY EVPS+  KA+W L+YT+++S P+F         + 
Sbjct: 189 IHTHAYQYCIESLGMDEGEIFNMYHEVPSVAKKASWGLKYTRSISDPTFQTGTPETDKQF 248

Query: 186 LTRSLRFLC 194
           L   + + C
Sbjct: 249 LKNLIAYYC 257


>gi|146282010|ref|YP_001172163.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           stutzeri A1501]
 gi|145570215|gb|ABP79321.1| ribonucleoside reductase, small chain [Pseudomonas stutzeri A1501]
          Length = 415

 Score =  259 bits (661), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 109/189 (57%), Positives = 148/189 (78%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL+ ++    RV VD+KRM+NAR+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 69  GLNELEGEAARVRVDEKRMINARADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMNADI 128

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKSK+GL++DER ++KRNLGFF++++SLVANN+VLA YR ++NPECRQY+LRQAFEEA
Sbjct: 129 ALWKSKDGLSEDERRIVKRNLGFFSTADSLVANNLVLATYRLITNPECRQYILRQAFEEA 188

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMY E+PS+  KA+W L+YT+++S P+F         + 
Sbjct: 189 IHTHAYQYCIESLGMDEGEIFNMYHEIPSVAKKASWGLKYTRSISDPTFQTGTPETDKQF 248

Query: 186 LTRSLRFLC 194
           L   + + C
Sbjct: 249 LKNLIAYYC 257


>gi|92112799|ref|YP_572727.1| ribonucleotide-diphosphate reductase subunit beta [Chromohalobacter
           salexigens DSM 3043]
 gi|91795889|gb|ABE58028.1| Ribonucleoside-diphosphate reductase [Chromohalobacter salexigens
           DSM 3043]
          Length = 420

 Score =  257 bits (656), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 109/190 (57%), Positives = 149/190 (78%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
            GL  ++ G  R+ VDDK+M+NAR+D+NQL+P KY WAW+KYL    NHWMP EV M  D
Sbjct: 73  AGLEELEMGAARIEVDDKQMINARADLNQLVPFKYEWAWQKYLDGSANHWMPQEVNMNAD 132

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           +ALWKS +GLT+DER +++R+LG+F++++SLVANN+VLA+YR ++NPECRQYLLRQAFEE
Sbjct: 133 IALWKSNDGLTEDERRIVERSLGYFSTADSLVANNLVLALYRLITNPECRQYLLRQAFEE 192

Query: 125 AVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           A+H+H +QY + SLG+DEGE+FNMYREVPS+ AK+ W+L++TQ+L+ P FH         
Sbjct: 193 AIHTHAYQYCVESLGMDEGEVFNMYREVPSVAAKSAWSLKHTQSLARPDFHTGTPETDQE 252

Query: 185 ILTRSLRFLC 194
           +L   + F C
Sbjct: 253 LLRNLIAFYC 262


>gi|88812072|ref|ZP_01127324.1| ribonucleotide-diphosphate reductase beta subunit [Nitrococcus
           mobilis Nb-231]
 gi|88790576|gb|EAR21691.1| ribonucleotide-diphosphate reductase beta subunit [Nitrococcus
           mobilis Nb-231]
          Length = 370

 Score =  256 bits (655), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 110/188 (58%), Positives = 145/188 (77%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
           TGL   + G  R+ VDDKR++N R+D+NQL+P KY WAWEKYL    NHWMP E+PM  D
Sbjct: 23  TGLDAPERGAARIRVDDKRIINCRADLNQLVPFKYHWAWEKYLQGSANHWMPQEIPMGRD 82

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           + LWK ++GLT+DER ++KR+LGFF++++SLVANN+VLA+YRH++NPECRQYLLRQAFEE
Sbjct: 83  IELWKRRDGLTEDERTIVKRSLGFFSTADSLVANNLVLAVYRHITNPECRQYLLRQAFEE 142

Query: 125 AVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           A+H+H +QY+I SL +DEGE+FNMYREVPS+  KA WAL +T++L  P F         R
Sbjct: 143 ALHTHAYQYVIESLAMDEGEVFNMYREVPSVARKAEWALPFTESLGDPDFRTGTPAADQR 202

Query: 185 ILTRSLRF 192
           +L   + F
Sbjct: 203 LLRDLIAF 210


>gi|226945386|ref|YP_002800459.1| ribonucleotide-diphosphate reductase subunit beta [Azotobacter
           vinelandii DJ]
 gi|226720313|gb|ACO79484.1| Ribonucleoside-diphosphate reductase beta subunit [Azotobacter
           vinelandii DJ]
          Length = 416

 Score =  256 bits (654), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 108/189 (57%), Positives = 146/189 (77%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++    RV VD+KRM+N R+D+NQL+P KY WAW+KYL  C NHWMP E+ M  D+
Sbjct: 70  GLEDLEGAAARVRVDEKRMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEINMNADI 129

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS +GLT+DER +IKRNLGFF++++SLVANN+ LAIYR ++NPECRQY+LRQAFEEA
Sbjct: 130 ALWKSADGLTEDERRIIKRNLGFFSTADSLVANNLALAIYRLITNPECRQYILRQAFEEA 189

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMY E+PS+  KA+W L+YT+++S P+F         ++
Sbjct: 190 IHTHAYQYCIESLGMDEGEIFNMYHEIPSVAKKASWGLKYTRSISDPTFDTGTPETDRQL 249

Query: 186 LTRSLRFLC 194
           L   + + C
Sbjct: 250 LRNLIAYYC 258


>gi|307546480|ref|YP_003898959.1| ribonucleotide-diphosphate reductase subunit beta [Halomonas
           elongata DSM 2581]
 gi|307218504|emb|CBV43774.1| ribonucleotide-diphosphate reductase subunit beta [Halomonas
           elongata DSM 2581]
          Length = 415

 Score =  255 bits (651), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 108/190 (56%), Positives = 148/190 (77%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
            GL  ++ G  R+ VDDK+M+NAR+D+NQL+P KY WAW+KYL    NHWMP EV M  D
Sbjct: 68  AGLEELEMGAARIEVDDKQMINARADLNQLVPFKYEWAWQKYLDGSANHWMPQEVNMNAD 127

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           +ALWKS +GLTDDER +++R+LG+F++++SLVANN+VLA+YR ++NPECRQYLLRQAFEE
Sbjct: 128 IALWKSADGLTDDERRIVERSLGYFSTADSLVANNLVLALYRLITNPECRQYLLRQAFEE 187

Query: 125 AVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           A+H+H +QY + SL +DEGE+FNMYRE+PS+ AK+ W+L++TQ+L+ P FH         
Sbjct: 188 AIHTHAYQYCVESLAMDEGEVFNMYREIPSVAAKSAWSLKHTQSLARPDFHTGTPETDQE 247

Query: 185 ILTRSLRFLC 194
           +L   + F C
Sbjct: 248 LLRNLVAFYC 257


>gi|160871658|ref|ZP_02061790.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsiella
           grylli]
 gi|159120457|gb|EDP45795.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsiella
           grylli]
          Length = 362

 Score =  255 bits (651), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 107/188 (56%), Positives = 148/188 (78%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
           TGL  ++ G  RV+VDDK+++N R+D+NQL+P KY WAWEKYL+AC NHWMP E+ M  D
Sbjct: 14  TGLETLEVGAARVHVDDKKIINCRADLNQLVPFKYKWAWEKYLAACANHWMPQEINMSAD 73

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           +ALW+   GL +DERL+++R+LGFF++++SLVANN+VLA+YRH++NPECRQYLLRQAFEE
Sbjct: 74  IALWRDAKGLREDERLIVERSLGFFSTADSLVANNLVLAVYRHITNPECRQYLLRQAFEE 133

Query: 125 AVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           A+H+H +QY+I SLG+DE  +FNMYRE+P++  K  WAL +TQ+L+ P+F         R
Sbjct: 134 ALHTHAYQYVIESLGMDEARIFNMYRELPTVAKKTEWALPFTQSLADPNFRTGTPETDQR 193

Query: 185 ILTRSLRF 192
           +L   + F
Sbjct: 194 LLRDLIAF 201


>gi|15596352|ref|NP_249846.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           aeruginosa PAO1]
 gi|107100605|ref|ZP_01364523.1| hypothetical protein PaerPA_01001630 [Pseudomonas aeruginosa PACS2]
 gi|116049087|ref|YP_792111.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|152988648|ref|YP_001349579.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           aeruginosa PA7]
 gi|218892881|ref|YP_002441750.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           aeruginosa LESB58]
 gi|254239525|ref|ZP_04932847.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa 2192]
 gi|296390475|ref|ZP_06879950.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           aeruginosa PAb1]
 gi|313106126|ref|ZP_07792381.1| NrdB, tyrosyl radical-harboring component of class Ia
           ribonucleotide reductase [Pseudomonas aeruginosa 39016]
 gi|9947077|gb|AAG04544.1|AE004545_7 NrdB, tyrosyl radical-harboring component of class Ia
           ribonucleotide reductase [Pseudomonas aeruginosa PAO1]
 gi|115584308|gb|ABJ10323.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126192903|gb|EAZ56966.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa 2192]
 gi|150963806|gb|ABR85831.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa PA7]
 gi|187939552|gb|ACD38699.1| ribonucleoside reductase small chain [Pseudomonas aeruginosa]
 gi|218773109|emb|CAW28921.1| NrdB, tyrosyl radical-harboring component of class Ia
           ribonucleotide reductase [Pseudomonas aeruginosa LESB58]
 gi|310878883|gb|EFQ37477.1| NrdB, tyrosyl radical-harboring component of class Ia
           ribonucleotide reductase [Pseudomonas aeruginosa 39016]
          Length = 415

 Score =  254 bits (648), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 107/189 (56%), Positives = 145/189 (76%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++    RV V DK+M+NAR+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 69  GLDDLEGSAARVQVGDKQMINARADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMNADI 128

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKSK+GL++DER ++ RNLGFF++++SLVANN+VLA+YR ++NPECRQY+LRQAFEEA
Sbjct: 129 ALWKSKDGLSEDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEA 188

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMY E+PS+  KA+W L+YT+++S P F         + 
Sbjct: 189 IHTHAYQYCIESLGMDEGEIFNMYHEIPSVAKKASWGLKYTRSISDPMFQTGTPETDRQF 248

Query: 186 LTRSLRFLC 194
           L   + + C
Sbjct: 249 LRNLIAYYC 257


>gi|148546452|ref|YP_001266554.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           putida F1]
 gi|148510510|gb|ABQ77370.1| Ribonucleoside-diphosphate reductase [Pseudomonas putida F1]
          Length = 415

 Score =  254 bits (648), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 106/189 (56%), Positives = 144/189 (76%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL+ ++    RV VD+KRM+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 69  GLAELEGSSARVAVDEKRMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTADI 128

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS++GLT+DER ++ RNLGFF++++SLVANN+ LA+YR ++NPECRQY+LRQAFEEA
Sbjct: 129 ALWKSQDGLTEDERRIVMRNLGFFSTADSLVANNLALAVYRLITNPECRQYILRQAFEEA 188

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMY E+PS+  KA W L+YT+ +S P F+         +
Sbjct: 189 IHTHAYQYCIESLGMDEGEIFNMYHEIPSVAKKAAWGLKYTRAISDPEFNTGTVETDKEL 248

Query: 186 LTRSLRFLC 194
           L   + + C
Sbjct: 249 LRNLIAYYC 257


>gi|146308172|ref|YP_001188637.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           mendocina ymp]
 gi|145576373|gb|ABP85905.1| Ribonucleoside-diphosphate reductase [Pseudomonas mendocina ymp]
          Length = 416

 Score =  254 bits (648), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 106/189 (56%), Positives = 146/189 (77%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++    RV V DK+M+NAR+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 70  GLDDLEGAAARVQVGDKQMINARADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMNADI 129

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS +GL++DER ++ RNLGFF++++SLVANN+VLA+YR ++NPECRQY+LRQAFEEA
Sbjct: 130 ALWKSTDGLSEDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEA 189

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMY E+PS+  KA+W L+YT+++S P+F+        + 
Sbjct: 190 IHTHAYQYCIESLGMDEGEIFNMYHEIPSVAKKASWGLKYTRSISDPTFNTGTPETDRQF 249

Query: 186 LTRSLRFLC 194
           L   + + C
Sbjct: 250 LKNLIAYYC 258


>gi|325272776|ref|ZP_08139120.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas sp.
           TJI-51]
 gi|324102083|gb|EGB99585.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas sp.
           TJI-51]
          Length = 416

 Score =  253 bits (647), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 106/189 (56%), Positives = 144/189 (76%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL+ ++    RV VD+KRM+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 70  GLAELEGSSARVAVDEKRMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTADI 129

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS++GLT+DER ++ RNLGFF++++SLVANN+ LA+YR ++NPECRQY+LRQAFEEA
Sbjct: 130 ALWKSQDGLTEDERRIVMRNLGFFSTADSLVANNLALAVYRLITNPECRQYILRQAFEEA 189

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMY E+PS+  KA W L+YT+ +S P F+         +
Sbjct: 190 IHTHAYQYCIESLGMDEGEIFNMYHEIPSVAKKAAWGLKYTRAISDPEFNTGTVETDKEL 249

Query: 186 LTRSLRFLC 194
           L   + + C
Sbjct: 250 LRNLIAYYC 258


>gi|170720377|ref|YP_001748065.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           putida W619]
 gi|169758380|gb|ACA71696.1| Ribonucleoside-diphosphate reductase [Pseudomonas putida W619]
          Length = 416

 Score =  253 bits (647), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 106/189 (56%), Positives = 144/189 (76%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL+ ++    RV VD+KRM+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 70  GLAELEGSSARVAVDEKRMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTADI 129

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS++GLT+DER ++ RNLGFF++++SLVANN+ LA+YR ++NPECRQY+LRQAFEEA
Sbjct: 130 ALWKSQDGLTEDERRIVMRNLGFFSTADSLVANNLALAVYRLITNPECRQYILRQAFEEA 189

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMY E+PS+  KA W L+YT+ +S P F+         +
Sbjct: 190 IHTHAYQYCIESLGMDEGEIFNMYHEIPSVAKKAAWGLKYTRAISDPEFNTGTVETDKEL 249

Query: 186 LTRSLRFLC 194
           L   + + C
Sbjct: 250 LRNLIAYYC 258


>gi|256822964|ref|YP_003146927.1| Ribonucleoside-diphosphate reductase [Kangiella koreensis DSM
           16069]
 gi|256796503|gb|ACV27159.1| Ribonucleoside-diphosphate reductase [Kangiella koreensis DSM
           16069]
          Length = 421

 Score =  253 bits (646), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 106/189 (56%), Positives = 145/189 (76%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G  R+ VDDK+M+N R+D+NQL+P KY WAW+KYL  C+NHWMP E+ M  D+
Sbjct: 75  GLEELEMGAARIEVDDKKMINCRADLNQLVPFKYDWAWQKYLDGCSNHWMPQEINMTKDV 134

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           A WK  NGLTDDER ++ R+LG+F++++SLVANN+VLAIYR ++NPECRQY+LRQAFEEA
Sbjct: 135 ATWKDPNGLTDDERKIVMRSLGYFSTADSLVANNLVLAIYRLITNPECRQYILRQAFEEA 194

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY + SLG+DE E+FNMYREVPSI  KA W++++TQ +S+P+F          +
Sbjct: 195 IHTHAYQYCVESLGMDEAEVFNMYREVPSIAKKAAWSIKHTQGISNPTFKTGTDEADQEL 254

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 255 LRNLIGFYC 263


>gi|254784923|ref|YP_003072351.1| ribonucleotide-diphosphate reductase subunit beta [Teredinibacter
           turnerae T7901]
 gi|237687536|gb|ACR14800.1| ribonucleoside-diphosphate reductase [Teredinibacter turnerae
           T7901]
          Length = 453

 Score =  253 bits (646), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 108/187 (57%), Positives = 143/187 (76%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G  R+ VDDKRM+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 108 GLEELEMGAARIEVDDKRMINCRADLNQLVPFKYEWAWQKYLDGCANHWMPQEVNMTADV 167

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           A+WKS+ GL+ DER ++ R+LG+F++++SLVANN+VLAIYRH++NPE RQYLLRQAFEEA
Sbjct: 168 AIWKSEEGLSADERKIVMRSLGYFSTADSLVANNLVLAIYRHITNPEARQYLLRQAFEEA 227

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMYREVPS+  KA W++ +TQ +S P FH         +
Sbjct: 228 IHTHAYQYCIESLGMDEGEVFNMYREVPSVAKKAAWSITHTQGISDPQFHTGTPEADQEL 287

Query: 186 LTRSLRF 192
           L   + F
Sbjct: 288 LRNLIGF 294


>gi|330504346|ref|YP_004381215.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           mendocina NK-01]
 gi|328918632|gb|AEB59463.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           mendocina NK-01]
          Length = 416

 Score =  253 bits (646), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 106/189 (56%), Positives = 144/189 (76%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++    RV V DK+M+NAR+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 70  GLDDLEGASARVQVGDKQMINARADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMNADI 129

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS +GL++DER ++ RNLGFF++++SLVANN+VLA+YR ++NPECRQY+LRQAFEEA
Sbjct: 130 ALWKSTDGLSEDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEA 189

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMY E+PS+  KA+W L+YT+++S P F         + 
Sbjct: 190 IHTHAYQYCIESLGMDEGEIFNMYHEIPSVAKKASWGLKYTRSISDPQFQTGTPETDRQF 249

Query: 186 LTRSLRFLC 194
           L   + + C
Sbjct: 250 LRNLIAYYC 258


>gi|254483523|ref|ZP_05096750.1| ribonucleoside-diphosphate reductase, beta subunit [marine gamma
           proteobacterium HTCC2148]
 gi|214036244|gb|EEB76924.1| ribonucleoside-diphosphate reductase, beta subunit [marine gamma
           proteobacterium HTCC2148]
          Length = 425

 Score =  253 bits (646), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 108/188 (57%), Positives = 148/188 (78%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
            GL  ++ G  RV+VD+K M+N R+D+NQL+PLKY WAW+KYL  C NHWMP E+ M  D
Sbjct: 78  AGLEELEMGASRVSVDEKAMINCRADLNQLVPLKYDWAWQKYLDGCANHWMPQEINMTAD 137

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           +A WKS +GL+DDER ++ R+LG+F++++SLVANN+VLA+YR ++NPECRQYLLRQAFEE
Sbjct: 138 VATWKSADGLSDDERRIVMRSLGYFSTADSLVANNLVLALYRLITNPECRQYLLRQAFEE 197

Query: 125 AVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           A+H+H +QY I SLG+DEGE+FNMYREVPS+ AKA+W+L +T +LS P+F+   +     
Sbjct: 198 AIHTHAYQYCIESLGMDEGEVFNMYREVPSVAAKASWSLSHTHSLSDPTFNTGTQETDQE 257

Query: 185 ILTRSLRF 192
           +L   + F
Sbjct: 258 LLRNLIGF 265


>gi|26987912|ref|NP_743337.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           putida KT2440]
 gi|167035231|ref|YP_001670462.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           putida GB-1]
 gi|24982621|gb|AAN66801.1|AE016309_3 ribonucleoside reductase, beta subunit [Pseudomonas putida KT2440]
 gi|166861719|gb|ABZ00127.1| Ribonucleoside-diphosphate reductase [Pseudomonas putida GB-1]
 gi|313497534|gb|ADR58900.1| NrdB [Pseudomonas putida BIRD-1]
          Length = 416

 Score =  253 bits (645), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 106/189 (56%), Positives = 144/189 (76%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL+ ++    RV VD+KRM+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 70  GLAELEGSSARVAVDEKRMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTADI 129

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS++GLT+DER ++ RNLGFF++++SLVANN+ LA+YR ++NPECRQY+LRQAFEEA
Sbjct: 130 ALWKSQDGLTEDERRIVMRNLGFFSTADSLVANNLALAVYRLITNPECRQYILRQAFEEA 189

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMY E+PS+  KA W L+YT+ +S P F+         +
Sbjct: 190 IHTHAYQYCIESLGMDEGEIFNMYHEIPSVAKKAAWGLKYTRAISDPEFNTGTVETDKEL 249

Query: 186 LTRSLRFLC 194
           L   + + C
Sbjct: 250 LRNLIAYYC 258


>gi|104780527|ref|YP_607025.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           entomophila L48]
 gi|95109514|emb|CAK14215.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           entomophila L48]
          Length = 415

 Score =  252 bits (644), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 106/189 (56%), Positives = 143/189 (75%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL+ ++    RV VD+KRM+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 69  GLAELEGSSARVAVDEKRMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTADI 128

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS +GLT+DER ++ RNLGFF++++SLVANN+ LA+YR ++NPECRQY+LRQAFEEA
Sbjct: 129 ALWKSMDGLTEDERRIVMRNLGFFSTADSLVANNLALAVYRLITNPECRQYILRQAFEEA 188

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMY E+PS+  KA W L+YT+ +S P F+         +
Sbjct: 189 IHTHAYQYCIESLGMDEGEIFNMYHEIPSVAKKAAWGLKYTRAISDPEFNTGTVETDKEL 248

Query: 186 LTRSLRFLC 194
           L   + + C
Sbjct: 249 LRNLIAYYC 257


>gi|90022104|ref|YP_527931.1| ribonucleotide-diphosphate reductase subunit beta [Saccharophagus
           degradans 2-40]
 gi|89951704|gb|ABD81719.1| Class Ia ribonucleoside-diphosphate reductase beta subunit
           [Saccharophagus degradans 2-40]
          Length = 423

 Score =  252 bits (643), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 109/192 (56%), Positives = 145/192 (75%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           M    GL  ++ G +R+ VDDKRM+N R+D+NQL+P KY WAW+KYL  C NHWMP EV 
Sbjct: 72  MDPTLGLEELEIGAERIEVDDKRMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVN 131

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+A WKS +GL++DER +I R+LG+F++++SLVANN+VLAIYRH++NPE RQYLLRQ
Sbjct: 132 MTADVATWKSPDGLSEDERRIIMRSLGYFSTADSLVANNLVLAIYRHITNPEARQYLLRQ 191

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QY I SLG+DEGE+FNMYREVPS+  KA W++ +TQ +S P+F      
Sbjct: 192 AFEEAIHTHAYQYCIESLGMDEGEVFNMYREVPSVAKKAAWSIAHTQGMSDPTFKTGTPE 251

Query: 181 RRSRILTRSLRF 192
               +L   + F
Sbjct: 252 ADQELLRNLIGF 263


>gi|330811278|ref|YP_004355740.1| Ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327379386|gb|AEA70736.1| Ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 415

 Score =  252 bits (643), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 106/189 (56%), Positives = 142/189 (75%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL+ ++    RV VD+KRM+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 69  GLAELEGASARVAVDEKRMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTADI 128

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWK+  GLTDDER ++ RNLGFF++++SLVANN+VLA+YR ++NPECRQY+LRQAFEEA
Sbjct: 129 ALWKNPEGLTDDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEA 188

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SL +DEGE+FNMY E+PS+  KA W L+YT+++S P F          +
Sbjct: 189 IHTHAYQYCIESLAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTPDTDKEL 248

Query: 186 LTRSLRFLC 194
           L   + + C
Sbjct: 249 LRNLIAYYC 257


>gi|77460516|ref|YP_350023.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           fluorescens Pf0-1]
 gi|77384519|gb|ABA76032.1| ribonucleoside-diphosphate reductase beta chain [Pseudomonas
           fluorescens Pf0-1]
          Length = 416

 Score =  251 bits (642), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 106/189 (56%), Positives = 142/189 (75%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL+ ++    RV VD+KRM+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 70  GLAELEGSAARVAVDEKRMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTADI 129

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWK+  GLTDDER ++ RNLGFF++++SLVANN+ LA+YR ++NPECRQY+LRQAFEEA
Sbjct: 130 ALWKNPEGLTDDERRIVMRNLGFFSTADSLVANNLALAVYRLITNPECRQYILRQAFEEA 189

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMY E+PS+  KA W L+YT+ +S P F+         +
Sbjct: 190 IHTHAYQYCIESLGMDEGEIFNMYHEIPSVAKKAAWGLKYTRAISDPEFNTGTVETDKEL 249

Query: 186 LTRSLRFLC 194
           L   + + C
Sbjct: 250 LRNLIAYYC 258


>gi|70731866|ref|YP_261608.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           fluorescens Pf-5]
 gi|68346165|gb|AAY93771.1| ribonucleoside-diphosphate reductase, beta subunit, putative
           [Pseudomonas fluorescens Pf-5]
          Length = 415

 Score =  251 bits (642), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 106/189 (56%), Positives = 142/189 (75%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL+ ++    RV VD+KRM+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 69  GLAELEGSSARVAVDEKRMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTADI 128

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWK+  GLTDDER ++ RNLGFF++++SLVANN+VLA+YR ++NPECRQY+LRQAFEEA
Sbjct: 129 ALWKNPEGLTDDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEA 188

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SL +DEGE+FNMY E+PS+  KA W L+YT+++S P F          +
Sbjct: 189 IHTHAYQYCIESLAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTVDTDKEL 248

Query: 186 LTRSLRFLC 194
           L   + + C
Sbjct: 249 LRNLIAYYC 257


>gi|229592166|ref|YP_002874285.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           fluorescens SBW25]
 gi|229364032|emb|CAY51597.1| ribonucleoside-diphosphate reductase beta chain [Pseudomonas
           fluorescens SBW25]
          Length = 416

 Score =  251 bits (641), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 106/189 (56%), Positives = 142/189 (75%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL+ ++    RV VD+KRM+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 70  GLAELEGSAARVAVDEKRMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTADI 129

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWK+  GLTDDER ++ RNLGFF++++SLVANN+VLA+YR ++NPECRQY+LRQAFEEA
Sbjct: 130 ALWKNPEGLTDDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEA 189

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SL +DEGE+FNMY E+PS+  KA W L+YT+++S P F          +
Sbjct: 190 IHTHAYQYCIESLAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTVETDKEL 249

Query: 186 LTRSLRFLC 194
           L   + + C
Sbjct: 250 LRNLVAYYC 258


>gi|229590245|ref|YP_002872364.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           fluorescens SBW25]
 gi|229362111|emb|CAY49013.1| putative ribonucleoside-diphosphate reductase beta chain
           [Pseudomonas fluorescens SBW25]
          Length = 416

 Score =  251 bits (640), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 106/189 (56%), Positives = 142/189 (75%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL+ ++    RV VD+KRM+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 70  GLAELEGSAARVAVDEKRMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTADI 129

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWK+  GLTDDER ++ RNLGFF++++SLVANN+VLA+YR ++NPECRQY+LRQAFEEA
Sbjct: 130 ALWKNPEGLTDDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEA 189

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SL +DEGE+FNMY E+PS+  KA W L+YT+++S P F          +
Sbjct: 190 IHTHAYQYCIESLAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTVETDKEL 249

Query: 186 LTRSLRFLC 194
           L   + + C
Sbjct: 250 LRNLVAYYC 258


>gi|312960686|ref|ZP_07775192.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           fluorescens WH6]
 gi|311285212|gb|EFQ63787.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           fluorescens WH6]
          Length = 416

 Score =  251 bits (640), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 106/189 (56%), Positives = 142/189 (75%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL+ ++    RV VD+KRM+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 70  GLAELEGASARVAVDEKRMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTADI 129

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWK+  GLTDDER ++ RNLGFF++++SLVANN+VLA+YR ++NPECRQY+LRQAFEEA
Sbjct: 130 ALWKNPEGLTDDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEA 189

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SL +DEGE+FNMY E+PS+  KA W L+YT+++S P F          +
Sbjct: 190 IHTHAYQYCIESLAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTVDTDKEL 249

Query: 186 LTRSLRFLC 194
           L   + + C
Sbjct: 250 LRNLVAYYC 258


>gi|192360823|ref|YP_001982048.1| ribonucleotide-diphosphate reductase subunit beta [Cellvibrio
           japonicus Ueda107]
 gi|190686988|gb|ACE84666.1| ribonucleoside reductase, beta subunit [Cellvibrio japonicus
           Ueda107]
          Length = 429

 Score =  251 bits (640), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 105/169 (62%), Positives = 141/169 (83%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G  R+ VDDKRM+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 83  GLEELEMGAARIQVDDKRMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTADI 142

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKSK+GLT+DER ++ R+LG+F++++SLVANN+VLAIYR ++NPECRQY+LRQ+FEEA
Sbjct: 143 ALWKSKDGLTEDERRIVMRSLGYFSTADSLVANNLVLAIYRLITNPECRQYILRQSFEEA 202

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           +H+H +QY I SLG+DEGE+FNMYRE+PS+  KA W+L +T +L +P+F
Sbjct: 203 IHTHAYQYCIESLGMDEGEVFNMYRELPSVANKAAWSLHHTHSLGNPTF 251


>gi|330949820|gb|EGH50080.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae Cit 7]
          Length = 359

 Score =  250 bits (639), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 105/189 (55%), Positives = 141/189 (74%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL+ ++    RV VD+K M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 69  GLAELEGASARVAVDEKMMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTADI 128

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWK+  GLTDDER ++ RNLGFF++++SLVANN+VLA+YR ++NPECRQY+LRQAFEEA
Sbjct: 129 ALWKNPEGLTDDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEA 188

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SL +DEGE+FNMY E+PS+  KA W L+YT+++S P F          +
Sbjct: 189 IHTHAYQYCIESLAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTVETDKEL 248

Query: 186 LTRSLRFLC 194
           L   + + C
Sbjct: 249 LRNLIAYYC 257


>gi|320323423|gb|EFW79511.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. glycinea str. B076]
 gi|320327620|gb|EFW83632.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330876273|gb|EGH10422.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 415

 Score =  250 bits (639), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 105/189 (55%), Positives = 142/189 (75%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL+ ++    RV VD+K M+N R+D+NQL+P KY WAW+KYL  C+NHWMP EV M  D+
Sbjct: 69  GLAELEGASARVAVDEKMMINCRADLNQLVPFKYDWAWQKYLDGCSNHWMPQEVNMTADI 128

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWK+  GLTDDER ++ RNLGFF++++SLVANN+VLA+YR ++NPECRQY+LRQAFEEA
Sbjct: 129 ALWKNPEGLTDDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEA 188

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SL +DEGE+FNMY E+PS+  KA W L+YT+++S P F          +
Sbjct: 189 IHTHAYQYCIESLAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTVETDKEL 248

Query: 186 LTRSLRFLC 194
           L   + + C
Sbjct: 249 LRNLIAYYC 257


>gi|71737432|ref|YP_275887.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|257485935|ref|ZP_05639976.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|289628680|ref|ZP_06461634.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|289648392|ref|ZP_06479735.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. aesculi str. 2250]
 gi|298487941|ref|ZP_07005980.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|302184861|ref|ZP_07261534.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. syringae 642]
 gi|71557985|gb|AAZ37196.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|298157492|gb|EFH98573.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|330866023|gb|EGH00732.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. aesculi str. 0893_23]
 gi|330896997|gb|EGH28545.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. japonica str. M301072PT]
 gi|330986742|gb|EGH84845.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. lachrymans str. M301315]
 gi|331010341|gb|EGH90397.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 415

 Score =  249 bits (637), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 105/189 (55%), Positives = 141/189 (74%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL+ ++    RV VD+K M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 69  GLAELEGASARVAVDEKMMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTADI 128

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWK+  GLTDDER ++ RNLGFF++++SLVANN+VLA+YR ++NPECRQY+LRQAFEEA
Sbjct: 129 ALWKNPEGLTDDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEA 188

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SL +DEGE+FNMY E+PS+  KA W L+YT+++S P F          +
Sbjct: 189 IHTHAYQYCIESLAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTVETDKEL 248

Query: 186 LTRSLRFLC 194
           L   + + C
Sbjct: 249 LRNLIAYYC 257


>gi|28868867|ref|NP_791486.1| ribonucleoside-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213969520|ref|ZP_03397656.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           syringae pv. tomato T1]
 gi|301385974|ref|ZP_07234392.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tomato Max13]
 gi|302058701|ref|ZP_07250242.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tomato K40]
 gi|302134408|ref|ZP_07260398.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|28852106|gb|AAO55181.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213925616|gb|EEB59175.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           syringae pv. tomato T1]
 gi|330960626|gb|EGH60886.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. maculicola str. ES4326]
 gi|331016758|gb|EGH96814.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 415

 Score =  249 bits (636), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 105/189 (55%), Positives = 140/189 (74%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL+ ++    RV VD+K M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 69  GLAELEGASARVAVDEKMMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTADI 128

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWK   GLTDDER ++ RNLGFF++++SLVANN+VLA+YR ++NPECRQY+LRQAFEEA
Sbjct: 129 ALWKDPEGLTDDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEA 188

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SL +DEGE+FNMY E+PS+  KA W L+YT+++S P F          +
Sbjct: 189 IHTHAYQYCIESLAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTVDTDKEL 248

Query: 186 LTRSLRFLC 194
           L   + + C
Sbjct: 249 LRNLIAYYC 257


>gi|312795100|ref|YP_004028022.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
           rhizoxinica HKI 454]
 gi|312166875|emb|CBW73878.1| Ribonucleoside-diphosphate reductase beta chain (EC 1.17.4.1)
           [Burkholderia rhizoxinica HKI 454]
          Length = 416

 Score =  249 bits (636), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 110/187 (58%), Positives = 138/187 (73%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           SP  A E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+AL
Sbjct: 72  SPAPAPEARVNVADKRIINGKTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIAL 131

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           WK  NGLTDDER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H
Sbjct: 132 WKDPNGLTDDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIH 191

Query: 128 SHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILT 187
           +H +QYI+ SLGLDEGE+FN Y EV SI AK  + + +  TL+ PSF         ++L 
Sbjct: 192 THAYQYIVESLGLDEGEIFNAYHEVSSIRAKDEFLIPFIHTLTDPSFKTGTLEADQKLLK 251

Query: 188 RSLRFLC 194
             + F C
Sbjct: 252 SLIVFAC 258


>gi|119504228|ref|ZP_01626308.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma
           proteobacterium HTCC2080]
 gi|119459736|gb|EAW40831.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma
           proteobacterium HTCC2080]
          Length = 419

 Score =  249 bits (636), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 109/189 (57%), Positives = 143/189 (75%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G  RV+VD+K M+N R+D+NQL+P KY WAW+KY+  C NHWMP EV M  D+
Sbjct: 73  GLEELEMGAARVSVDEKAMINCRADLNQLVPFKYDWAWQKYIDGCANHWMPQEVNMTADV 132

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           A WK  +GL+DDER +I R+LG+F++++SLVANN+VLAIYR ++NPECRQYLLRQAFEEA
Sbjct: 133 ATWKDPDGLSDDERRIIMRSLGYFSTADSLVANNLVLAIYRLITNPECRQYLLRQAFEEA 192

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMYREVPS+ AKA W+L  T +LS P+F          +
Sbjct: 193 IHTHAYQYCIESLGMDEGEVFNMYREVPSVAAKATWSLGKTHSLSDPNFRTGTLETDQEL 252

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 253 LRNLIGFYC 261


>gi|66046950|ref|YP_236791.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. syringae B728a]
 gi|237798938|ref|ZP_04587399.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|237806191|ref|ZP_04592895.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|63257657|gb|AAY38753.1| Ribonucleoside-diphosphate reductase [Pseudomonas syringae pv.
           syringae B728a]
 gi|330980156|gb|EGH78342.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. aptata str. DSM 50252]
 gi|331021792|gb|EGI01849.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|331027304|gb|EGI07359.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. oryzae str. 1_6]
          Length = 415

 Score =  249 bits (636), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 105/189 (55%), Positives = 141/189 (74%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL+ ++    RV VD+K M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 69  GLAELEGASARVAVDEKMMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTADI 128

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWK+  GLTDDER ++ RNLGFF++++SLVANN+VLA+YR ++NPECRQY+LRQAFEEA
Sbjct: 129 ALWKNPEGLTDDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEA 188

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SL +DEGE+FNMY E+PS+  KA W L+YT+++S P F          +
Sbjct: 189 IHTHAYQYCIESLAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTVDTDKEL 248

Query: 186 LTRSLRFLC 194
           L   + + C
Sbjct: 249 LRNLIAYYC 257


>gi|119478322|ref|ZP_01618353.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma
           proteobacterium HTCC2143]
 gi|119448662|gb|EAW29907.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma
           proteobacterium HTCC2143]
          Length = 422

 Score =  249 bits (635), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 106/188 (56%), Positives = 143/188 (76%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
            GL  ++ G  R+ V+DK M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D
Sbjct: 75  AGLEELELGAARLTVEDKAMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTAD 134

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           +ALWK  NGL+DDER ++ R+LG+F++++SLVANN++LAIYRH++NPECRQYLLRQAFEE
Sbjct: 135 VALWKDPNGLSDDERRIVMRSLGYFSTADSLVANNLILAIYRHITNPECRQYLLRQAFEE 194

Query: 125 AVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           A+H+H +QY + SL +DEGE+FNMYRE+PSI  KA W+L++T +LS P+F          
Sbjct: 195 AIHTHAYQYCVESLAMDEGEVFNMYRELPSIAKKAAWSLRHTHSLSDPNFKTGTPETDQE 254

Query: 185 ILTRSLRF 192
           +L   + F
Sbjct: 255 LLRNLIGF 262


>gi|330880140|gb|EGH14289.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. morsprunorum str. M302280PT]
 gi|330966559|gb|EGH66819.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. actinidiae str. M302091]
          Length = 415

 Score =  249 bits (635), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 105/189 (55%), Positives = 140/189 (74%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL+ ++    RV VD+K M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 69  GLAELEGASARVAVDEKMMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTADI 128

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWK   GLTDDER ++ RNLGFF++++SLVANN+VLA+YR ++NPECRQY+LRQAFEEA
Sbjct: 129 ALWKDPEGLTDDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEA 188

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SL +DEGE+FNMY E+PS+  KA W L+YT+++S P F          +
Sbjct: 189 IHTHAYQYCIESLAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTVDTDKEL 248

Query: 186 LTRSLRFLC 194
           L   + + C
Sbjct: 249 LRNLIAYYC 257


>gi|330941351|gb|EGH44203.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 317

 Score =  248 bits (634), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 105/189 (55%), Positives = 140/189 (74%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL+ ++    RV VD+K M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D 
Sbjct: 69  GLAELEGASARVAVDEKMMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTADT 128

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWK+  GLTDDER ++ RNLGFF++++SLVANN+VLA+YR ++NPECRQY+LRQAFEEA
Sbjct: 129 ALWKNPEGLTDDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEA 188

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SL +DEGE+FNMY E+PS+  KA W L+YT+++S P F          +
Sbjct: 189 IHTHAYQYCIESLAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTVETDKEL 248

Query: 186 LTRSLRFLC 194
           L   + + C
Sbjct: 249 LRNLIAYYC 257


>gi|254282900|ref|ZP_04957868.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium NOR51-B]
 gi|219679103|gb|EED35452.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium NOR51-B]
          Length = 421

 Score =  248 bits (632), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 106/189 (56%), Positives = 144/189 (76%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G +RV+VD+K M+N R+D+NQL+P KY WAW+KY+  C NHWMP EV M  D+
Sbjct: 75  GLEELEMGAQRVSVDEKAMINCRADLNQLVPFKYDWAWQKYIDGCANHWMPQEVNMTADV 134

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           A WKS +GLT+DER ++ R+LG+F++++SLVANN+VL IYR ++NPECRQYLLRQAFEEA
Sbjct: 135 ATWKSSDGLTEDERRIVLRSLGYFSTADSLVANNLVLGIYRLITNPECRQYLLRQAFEEA 194

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEG +FNMYREVPS+  KA W+L +T +LS P+F         ++
Sbjct: 195 IHTHAYQYCIESLGMDEGAVFNMYREVPSVARKATWSLSHTHSLSDPNFKTGTVETDQQL 254

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 255 LRNLVGFYC 263


>gi|161525957|ref|YP_001580969.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           multivorans ATCC 17616]
 gi|160343386|gb|ABX16472.1| Ribonucleoside-diphosphate reductase [Burkholderia multivorans ATCC
           17616]
          Length = 396

 Score =  248 bits (632), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 107/186 (57%), Positives = 137/186 (73%)

Query: 9   PIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           P    E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALW
Sbjct: 53  PAGGSEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALW 112

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           K  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+
Sbjct: 113 KDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHT 172

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
           H +QYI+ SLGLDEGE+FN Y EVPSI AK  + + +  TL+ P+F         ++L  
Sbjct: 173 HAYQYIVESLGLDEGEIFNAYHEVPSIRAKDEFLIPFIHTLTDPAFKTGTLEADQKLLKS 232

Query: 189 SLRFLC 194
            + F C
Sbjct: 233 LIVFAC 238


>gi|330983931|gb|EGH82034.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. lachrymans str. M301315]
          Length = 388

 Score =  247 bits (631), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 108/197 (54%), Positives = 146/197 (74%), Gaps = 8/197 (4%)

Query: 6   GLSPIQAGEK--------RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPT 57
           G   I AGE+        RV V  K+M+NAR+DVNQL+P KY WAW+KYL  C+NHWMP 
Sbjct: 34  GEMDIGAGERELEEGRQNRVQVGQKQMINARADVNQLVPFKYEWAWQKYLDGCSNHWMPQ 93

Query: 58  EVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYL 117
           EV M  D+ALWK  NGLTDDERL++KRNLG+F++++SLVANN+VLA+YR ++NPECRQY+
Sbjct: 94  EVNMSADIALWKDPNGLTDDERLILKRNLGYFSTADSLVANNLVLAVYRLITNPECRQYI 153

Query: 118 LRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYW 177
           LRQAFEEA+H+H +QY + SLGLD+GE+FNMY+EVPS+  KA W++++   ++ P+F   
Sbjct: 154 LRQAFEEAIHTHAYQYCVESLGLDDGEIFNMYQEVPSVARKAAWSIKHMDAITDPAFQTG 213

Query: 178 NKRRRSRILTRSLRFLC 194
                +  L   + + C
Sbjct: 214 TVEADTTFLKNLIAYYC 230


>gi|325519933|gb|EGC99191.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia sp.
           TJI49]
          Length = 403

 Score =  247 bits (631), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 108/194 (55%), Positives = 139/194 (71%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +A      P    E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ 
Sbjct: 52  VAPQASAVPAGGSEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEIN 111

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQ
Sbjct: 112 MSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQ 171

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYI+ SLGLDEGE+FN Y EVPSI AK  + + +  TL+ P+F      
Sbjct: 172 AFEEAIHTHAYQYIVESLGLDEGEIFNAYHEVPSIRAKDEFLIPFIHTLTDPAFKTGTLE 231

Query: 181 RRSRILTRSLRFLC 194
              ++L   + F C
Sbjct: 232 ADQKLLKSLIVFAC 245


>gi|331006663|ref|ZP_08329944.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma
           proteobacterium IMCC1989]
 gi|330419531|gb|EGG93916.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma
           proteobacterium IMCC1989]
          Length = 444

 Score =  247 bits (631), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 105/187 (56%), Positives = 143/187 (76%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           G+  ++ G  RV VD+K M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 98  GIEELEMGAARVGVDEKAMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTADI 157

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           +LWK  +GL+DDER +I R+LG+F++++SLVANN+VLA+YR ++NPECRQYLLRQAFEEA
Sbjct: 158 SLWKDPDGLSDDERRIIMRSLGYFSTADSLVANNLVLAVYRLITNPECRQYLLRQAFEEA 217

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMYREVPS+  KA W++ +TQ +S P+F+         +
Sbjct: 218 IHTHAYQYCIESLGMDEGEIFNMYREVPSVANKAAWSIAHTQGISDPTFNTGTTETDQEL 277

Query: 186 LTRSLRF 192
           L   + F
Sbjct: 278 LRNLIGF 284


>gi|307731037|ref|YP_003908261.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1003]
 gi|307585572|gb|ADN58970.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1003]
          Length = 411

 Score =  247 bits (630), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 111/201 (55%), Positives = 141/201 (70%), Gaps = 7/201 (3%)

Query: 1   MANNTGLSPIQAG-------EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNH 53
            AN+  ++P+  G       E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NH
Sbjct: 53  FANDIAVAPVARGAGTAAVSEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANH 112

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           WMP EV M  D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PEC
Sbjct: 113 WMPQEVNMSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPEC 172

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
           RQ+LLRQAFEEA+H+H +QYI+ SLGLDEGE+FN Y EVPSI AK  + + Y   L+ P 
Sbjct: 173 RQFLLRQAFEEAIHTHAYQYIVESLGLDEGEIFNAYHEVPSIRAKDEFLIPYINVLTDPG 232

Query: 174 FHYWNKRRRSRILTRSLRFLC 194
           F          +L   + F C
Sbjct: 233 FKTGTLETDQTLLRSLIVFAC 253


>gi|254253304|ref|ZP_04946622.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia
           dolosa AUO158]
 gi|124895913|gb|EAY69793.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia
           dolosa AUO158]
          Length = 403

 Score =  247 bits (630), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 107/186 (57%), Positives = 137/186 (73%)

Query: 9   PIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           P    E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALW
Sbjct: 60  PAGGSEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALW 119

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           K  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+
Sbjct: 120 KDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHT 179

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
           H +QYI+ SLGLDEGE+FN Y EVPSI AK  + + +  TL+ P+F         ++L  
Sbjct: 180 HAYQYIVESLGLDEGEIFNAYHEVPSIRAKDEFLIPFIHTLTDPAFKTGTLEADQKLLKS 239

Query: 189 SLRFLC 194
            + F C
Sbjct: 240 LIVFAC 245


>gi|189349324|ref|YP_001944952.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           multivorans ATCC 17616]
 gi|221213238|ref|ZP_03586213.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD1]
 gi|189333346|dbj|BAG42416.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
           multivorans ATCC 17616]
 gi|221166690|gb|EED99161.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD1]
          Length = 403

 Score =  247 bits (630), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 107/186 (57%), Positives = 137/186 (73%)

Query: 9   PIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           P    E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALW
Sbjct: 60  PAGGSEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALW 119

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           K  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+
Sbjct: 120 KDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHT 179

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
           H +QYI+ SLGLDEGE+FN Y EVPSI AK  + + +  TL+ P+F         ++L  
Sbjct: 180 HAYQYIVESLGLDEGEIFNAYHEVPSIRAKDEFLIPFIHTLTDPAFKTGTLEADQKLLKS 239

Query: 189 SLRFLC 194
            + F C
Sbjct: 240 LIVFAC 245


>gi|76808925|ref|YP_334881.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 1710b]
 gi|254208116|ref|ZP_04914466.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei JHU]
 gi|76578378|gb|ABA47853.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
           pseudomallei 1710b]
 gi|147752010|gb|EDK59077.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei JHU]
          Length = 376

 Score =  246 bits (629), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 107/183 (58%), Positives = 137/183 (74%)

Query: 12  AGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSK 71
           A E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALWK  
Sbjct: 36  ASEARVNVADKRIINGKTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALWKDP 95

Query: 72  NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
           NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +
Sbjct: 96  NGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAY 155

Query: 132 QYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           QYI+ SLGLDEGE+FN Y EVPSI AK  + + +  TL+ P+F         ++L   + 
Sbjct: 156 QYIVESLGLDEGEIFNAYHEVPSIRAKDEFLIPFIHTLTDPAFTTGTLEADQKLLKSLIV 215

Query: 192 FLC 194
           F C
Sbjct: 216 FAC 218


>gi|221202418|ref|ZP_03575450.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD2M]
 gi|221208122|ref|ZP_03581127.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD2]
 gi|221172025|gb|EEE04467.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD2]
 gi|221177695|gb|EEE10110.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD2M]
          Length = 372

 Score =  246 bits (629), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 107/186 (57%), Positives = 137/186 (73%)

Query: 9   PIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           P    E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALW
Sbjct: 29  PAGGSEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALW 88

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           K  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+
Sbjct: 89  KDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHT 148

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
           H +QYI+ SLGLDEGE+FN Y EVPSI AK  + + +  TL+ P+F         ++L  
Sbjct: 149 HAYQYIVESLGLDEGEIFNAYHEVPSIRAKDEFLIPFIHTLTDPAFKTGTLEADQKLLKS 208

Query: 189 SLRFLC 194
            + F C
Sbjct: 209 LIVFAC 214


>gi|83719302|ref|YP_441701.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           thailandensis E264]
 gi|83653127|gb|ABC37190.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           thailandensis E264]
          Length = 377

 Score =  246 bits (629), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 107/183 (58%), Positives = 137/183 (74%)

Query: 12  AGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSK 71
           A E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALWK  
Sbjct: 37  ASEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALWKDP 96

Query: 72  NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
           NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +
Sbjct: 97  NGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAY 156

Query: 132 QYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           QYI+ SLGLDEGE+FN Y EVPSI AK  + + +  TL+ P+F         ++L   + 
Sbjct: 157 QYIVESLGLDEGEIFNAYHEVPSIRAKDEFLIPFIHTLTDPAFKTGTLEADQKLLKSLIV 216

Query: 192 FLC 194
           F C
Sbjct: 217 FAC 219


>gi|119713586|gb|ABL97637.1| ribonucleotide-diphosphate reductase beta subunit [uncultured
           marine bacterium EB0_39H12]
          Length = 412

 Score =  246 bits (629), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 106/190 (55%), Positives = 139/190 (73%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
            G   ++    RV VDDK M+N R+D+NQL+P KY WAW+KYL    NHWMP EV M  D
Sbjct: 65  AGEEELEGLAGRVQVDDKAMINCRADLNQLVPFKYDWAWQKYLDGSANHWMPQEVNMTAD 124

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           +ALWKS +GLT+DER ++ RNLGFF++++SLVANN+VLAIYR ++NPECRQY+LRQ FEE
Sbjct: 125 IALWKSNDGLTEDERTIVMRNLGFFSTADSLVANNLVLAIYRLITNPECRQYILRQGFEE 184

Query: 125 AVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           A+H+H +QY I SLG+DEG +FNMYRE+PS+  KA+W L+YT+ +S P F          
Sbjct: 185 AIHTHAYQYCIESLGMDEGAIFNMYREIPSVAKKASWGLKYTKEISDPGFTTGTDETDKL 244

Query: 185 ILTRSLRFLC 194
           +L   + F C
Sbjct: 245 LLKNLIAFYC 254


>gi|121598515|ref|YP_991780.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           mallei SAVP1]
 gi|124385654|ref|YP_001027273.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           mallei NCTC 10229]
 gi|126439848|ref|YP_001060484.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 668]
 gi|126451145|ref|YP_001082790.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           mallei NCTC 10247]
 gi|126453692|ref|YP_001067748.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 1106a]
 gi|134280207|ref|ZP_01766918.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 305]
 gi|166998593|ref|ZP_02264451.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei PRL-20]
 gi|167721297|ref|ZP_02404533.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei DM98]
 gi|167740266|ref|ZP_02413040.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 14]
 gi|167817486|ref|ZP_02449166.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 91]
 gi|167847373|ref|ZP_02472881.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei B7210]
 gi|167895962|ref|ZP_02483364.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 7894]
 gi|167904346|ref|ZP_02491551.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei NCTC 13177]
 gi|167912606|ref|ZP_02499697.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 112]
 gi|217420440|ref|ZP_03451945.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 576]
 gi|226196790|ref|ZP_03792369.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei Pakistan 9]
 gi|237813879|ref|YP_002898330.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei MSHR346]
 gi|238561262|ref|ZP_00442338.2| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei GB8 horse 4]
 gi|242316188|ref|ZP_04815204.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1106b]
 gi|254178822|ref|ZP_04885476.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei ATCC 10399]
 gi|254199038|ref|ZP_04905453.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei S13]
 gi|254202774|ref|ZP_04909137.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei FMH]
 gi|254259655|ref|ZP_04950709.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1710a]
 gi|254299327|ref|ZP_04966777.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 406e]
 gi|121227325|gb|ABM49843.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei SAVP1]
 gi|124293674|gb|ABN02943.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei NCTC 10229]
 gi|126219341|gb|ABN82847.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 668]
 gi|126227334|gb|ABN90874.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1106a]
 gi|126244015|gb|ABO07108.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei NCTC 10247]
 gi|134248214|gb|EBA48297.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 305]
 gi|147747021|gb|EDK54098.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei FMH]
 gi|157808756|gb|EDO85926.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 406e]
 gi|160694736|gb|EDP84744.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei ATCC 10399]
 gi|169656868|gb|EDS88265.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei S13]
 gi|217395852|gb|EEC35869.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 576]
 gi|225931050|gb|EEH27058.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei Pakistan 9]
 gi|237506031|gb|ACQ98349.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei MSHR346]
 gi|238524965|gb|EEP88395.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei GB8 horse 4]
 gi|242139427|gb|EES25829.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1106b]
 gi|243065276|gb|EES47462.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei PRL-20]
 gi|254218344|gb|EET07728.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1710a]
          Length = 403

 Score =  246 bits (628), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 107/183 (58%), Positives = 137/183 (74%)

Query: 12  AGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSK 71
           A E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALWK  
Sbjct: 63  ASEARVNVADKRIINGKTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALWKDP 122

Query: 72  NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
           NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +
Sbjct: 123 NGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAY 182

Query: 132 QYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           QYI+ SLGLDEGE+FN Y EVPSI AK  + + +  TL+ P+F         ++L   + 
Sbjct: 183 QYIVESLGLDEGEIFNAYHEVPSIRAKDEFLIPFIHTLTDPAFTTGTLEADQKLLKSLIV 242

Query: 192 FLC 194
           F C
Sbjct: 243 FAC 245


>gi|167825888|ref|ZP_02457359.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 9]
 gi|167924622|ref|ZP_02511713.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei BCC215]
 gi|254180586|ref|ZP_04887184.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1655]
 gi|254190977|ref|ZP_04897483.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei Pasteur 52237]
 gi|157938651|gb|EDO94321.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei Pasteur 52237]
 gi|184211125|gb|EDU08168.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1655]
          Length = 372

 Score =  246 bits (628), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 107/183 (58%), Positives = 137/183 (74%)

Query: 12  AGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSK 71
           A E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALWK  
Sbjct: 32  ASEARVNVADKRIINGKTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALWKDP 91

Query: 72  NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
           NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +
Sbjct: 92  NGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAY 151

Query: 132 QYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           QYI+ SLGLDEGE+FN Y EVPSI AK  + + +  TL+ P+F         ++L   + 
Sbjct: 152 QYIVESLGLDEGEIFNAYHEVPSIRAKDEFLIPFIHTLTDPAFTTGTLEADQKLLKSLIV 211

Query: 192 FLC 194
           F C
Sbjct: 212 FAC 214


>gi|53720599|ref|YP_109585.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei K96243]
 gi|53726102|ref|YP_104055.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           mallei ATCC 23344]
 gi|52211013|emb|CAH37001.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
           pseudomallei K96243]
 gi|52429525|gb|AAU50118.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei ATCC 23344]
          Length = 350

 Score =  246 bits (627), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 111/194 (57%), Positives = 141/194 (72%), Gaps = 2/194 (1%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           MA N   S   A E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ 
Sbjct: 1   MAPNA--SAAVASEARVNVADKRIINGKTDVNQLVPFKYKWAWEKYLAGCANHWMPQEIN 58

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQ
Sbjct: 59  MSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQ 118

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYI+ SLGLDEGE+FN Y EVPSI AK  + + +  TL+ P+F      
Sbjct: 119 AFEEAIHTHAYQYIVESLGLDEGEIFNAYHEVPSIRAKDEFLIPFIHTLTDPAFTTGTLE 178

Query: 181 RRSRILTRSLRFLC 194
              ++L   + F C
Sbjct: 179 ADQKLLKSLIVFAC 192


>gi|167580513|ref|ZP_02373387.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           thailandensis TXDOH]
 gi|167618621|ref|ZP_02387252.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           thailandensis Bt4]
 gi|257137870|ref|ZP_05586132.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           thailandensis E264]
          Length = 350

 Score =  246 bits (627), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 111/194 (57%), Positives = 141/194 (72%), Gaps = 2/194 (1%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           MA N   S   A E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ 
Sbjct: 1   MAPNA--SAAVASEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEIN 58

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQ
Sbjct: 59  MSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQ 118

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYI+ SLGLDEGE+FN Y EVPSI AK  + + +  TL+ P+F      
Sbjct: 119 AFEEAIHTHAYQYIVESLGLDEGEIFNAYHEVPSIRAKDEFLIPFIHTLTDPAFKTGTLE 178

Query: 181 RRSRILTRSLRFLC 194
              ++L   + F C
Sbjct: 179 ADQKLLKSLIVFAC 192


>gi|330892405|gb|EGH25066.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. mori str. 301020]
          Length = 415

 Score =  244 bits (624), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 103/189 (54%), Positives = 140/189 (74%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL+ ++    RV VD+K M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV    D+
Sbjct: 69  GLAELEGASARVAVDEKMMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNKTADI 128

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWK+  GLTDDER ++ RNLGFF++++SLVA+N+VLA+YR ++NPECRQY+LRQAFEEA
Sbjct: 129 ALWKNPEGLTDDERRIVMRNLGFFSTADSLVAHNLVLAVYRLITNPECRQYILRQAFEEA 188

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SL +DEGE+FNMY E+PS+  KA W L+YT+++S P F          +
Sbjct: 189 IHTHAYQYCIESLAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTVETDKEL 248

Query: 186 LTRSLRFLC 194
           L   + + C
Sbjct: 249 LRNLIAYYC 257


>gi|254516739|ref|ZP_05128798.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium NOR5-3]
 gi|219675162|gb|EED31529.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium NOR5-3]
          Length = 441

 Score =  244 bits (624), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 104/171 (60%), Positives = 138/171 (80%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
            GL  ++ G  RV++D+K M+N R+D+NQL+P KY WAW+KY+  C NHWMP EV M  D
Sbjct: 94  AGLEELEMGAARVSIDEKAMINCRADLNQLVPFKYDWAWQKYIDGCANHWMPQEVNMTAD 153

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           +A WK+  GLTDDER +I R+LG+F++++SLVANN+VLA+YR ++NPECRQYLLRQAFEE
Sbjct: 154 VATWKNPEGLTDDERRIILRSLGYFSTADSLVANNLVLAVYRLITNPECRQYLLRQAFEE 213

Query: 125 AVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFH 175
           A+H+H +QY I SLG+DEGE+FNMYREVPS+  KA W+L +T  LS P+F+
Sbjct: 214 AIHTHAYQYCIESLGMDEGEVFNMYREVPSVAKKAAWSLSHTHELSDPNFN 264


>gi|170699976|ref|ZP_02891003.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria
           IOP40-10]
 gi|170135124|gb|EDT03425.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria
           IOP40-10]
          Length = 403

 Score =  244 bits (622), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 106/186 (56%), Positives = 136/186 (73%)

Query: 9   PIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           P    E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALW
Sbjct: 60  PAAGSEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALW 119

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           K  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+
Sbjct: 120 KDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHT 179

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
           H +QYI+ SLGLDEGE+FN Y EV SI AK  + + +  TL+ P+F         ++L  
Sbjct: 180 HAYQYIVESLGLDEGEIFNAYHEVTSIRAKDEFLIPFIHTLTDPAFKTGTLEADQKLLKS 239

Query: 189 SLRFLC 194
            + F C
Sbjct: 240 LIVFAC 245


>gi|78065156|ref|YP_367925.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia sp.
           383]
 gi|77965901|gb|ABB07281.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. 383]
          Length = 403

 Score =  244 bits (622), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 106/186 (56%), Positives = 136/186 (73%)

Query: 9   PIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           P    E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALW
Sbjct: 60  PAGGSEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALW 119

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           K  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+
Sbjct: 120 KDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHT 179

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
           H +QYI+ SLGLDEGE+FN Y EV SI AK  + + +  TL+ P+F         ++L  
Sbjct: 180 HAYQYIVESLGLDEGEIFNAYHEVTSIRAKDEFLIPFIHTLTDPAFKTGTLEADQKLLKS 239

Query: 189 SLRFLC 194
            + F C
Sbjct: 240 LIVFAC 245


>gi|115350552|ref|YP_772391.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           ambifaria AMMD]
 gi|172059584|ref|YP_001807236.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           ambifaria MC40-6]
 gi|115280540|gb|ABI86057.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria AMMD]
 gi|171992101|gb|ACB63020.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria
           MC40-6]
          Length = 403

 Score =  244 bits (622), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 106/186 (56%), Positives = 136/186 (73%)

Query: 9   PIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           P    E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALW
Sbjct: 60  PAAGSEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALW 119

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           K  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+
Sbjct: 120 KDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHT 179

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
           H +QYI+ SLGLDEGE+FN Y EV SI AK  + + +  TL+ P+F         ++L  
Sbjct: 180 HAYQYIVESLGLDEGEIFNAYHEVTSIRAKDEFLIPFIHTLTDPAFKTGTLEADQKLLKS 239

Query: 189 SLRFLC 194
            + F C
Sbjct: 240 LIVFAC 245


>gi|171318520|ref|ZP_02907672.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria MEX-5]
 gi|171096306|gb|EDT41212.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria MEX-5]
          Length = 403

 Score =  244 bits (622), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 106/186 (56%), Positives = 136/186 (73%)

Query: 9   PIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           P    E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALW
Sbjct: 60  PAGGSEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALW 119

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           K  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+
Sbjct: 120 KDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHT 179

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
           H +QYI+ SLGLDEGE+FN Y EV SI AK  + + +  TL+ P+F         ++L  
Sbjct: 180 HAYQYIVESLGLDEGEIFNAYHEVTSIRAKDEFLIPFIHTLTDPAFKTGTLEADQKLLKS 239

Query: 189 SLRFLC 194
            + F C
Sbjct: 240 LIVFAC 245


>gi|206561765|ref|YP_002232530.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           cenocepacia J2315]
 gi|254246390|ref|ZP_04939711.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia
           cenocepacia PC184]
 gi|124871166|gb|EAY62882.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia
           cenocepacia PC184]
 gi|198037807|emb|CAR53751.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
           cenocepacia J2315]
          Length = 403

 Score =  243 bits (621), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 106/186 (56%), Positives = 136/186 (73%)

Query: 9   PIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           P    E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALW
Sbjct: 60  PAGGTEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALW 119

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           K  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+
Sbjct: 120 KDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHT 179

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
           H +QYI+ SLGLDEGE+FN Y EV SI AK  + + +  TL+ P+F         ++L  
Sbjct: 180 HAYQYIVESLGLDEGEIFNAYHEVTSIRAKDEFLIPFIHTLTDPAFKTGTLEADQKLLKS 239

Query: 189 SLRFLC 194
            + F C
Sbjct: 240 LIVFAC 245


>gi|134294683|ref|YP_001118418.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           vietnamiensis G4]
 gi|134137840|gb|ABO53583.1| Ribonucleoside-diphosphate reductase [Burkholderia vietnamiensis
           G4]
          Length = 403

 Score =  243 bits (621), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 106/186 (56%), Positives = 136/186 (73%)

Query: 9   PIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           P    E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALW
Sbjct: 60  PAGGSEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALW 119

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           K  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+
Sbjct: 120 KDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHT 179

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
           H +QYI+ SLGLDEGE+FN Y EV SI AK  + + +  TL+ P+F         ++L  
Sbjct: 180 HAYQYIVESLGLDEGEIFNAYHEVASIRAKDEFLIPFIHTLTDPAFKTGTLEADQKLLKS 239

Query: 189 SLRFLC 194
            + F C
Sbjct: 240 LIVFAC 245


>gi|255019430|ref|ZP_05291537.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Acidithiobacillus caldus ATCC 51756]
 gi|254971128|gb|EET28583.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Acidithiobacillus caldus ATCC 51756]
          Length = 345

 Score =  243 bits (621), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 108/175 (61%), Positives = 136/175 (77%), Gaps = 1/175 (0%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           RV V+DKR++N R+DVNQL+P KY WAW+KYL+AC NHWMP EV M  D+ALWK   GLT
Sbjct: 8   RVRVEDKRIINGRADVNQLVPFKYQWAWDKYLAACANHWMPQEVQMARDIALWKDPKGLT 67

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           +DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQYLLRQAFEEA+H+H +QYI+
Sbjct: 68  EDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIV 127

Query: 136 TSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSL 190
            SLGLDEGE+FNMY EVPS+ AK  + + + +TL+ P F     R   + L RSL
Sbjct: 128 ESLGLDEGEIFNMYHEVPSVRAKDEFLIPFIETLADPDFQT-GTRENDQKLLRSL 181


>gi|170731918|ref|YP_001763865.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           cenocepacia MC0-3]
 gi|169815160|gb|ACA89743.1| Ribonucleoside-diphosphate reductase [Burkholderia cenocepacia
           MC0-3]
          Length = 403

 Score =  243 bits (621), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 106/186 (56%), Positives = 136/186 (73%)

Query: 9   PIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           P    E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALW
Sbjct: 60  PAGGTEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALW 119

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           K  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+
Sbjct: 120 KDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHT 179

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
           H +QYI+ SLGLDEGE+FN Y EV SI AK  + + +  TL+ P+F         ++L  
Sbjct: 180 HAYQYIVESLGLDEGEIFNAYHEVTSIRAKDEFLIPFIHTLTDPAFKTGTLEADQKLLKS 239

Query: 189 SLRFLC 194
            + F C
Sbjct: 240 LIVFAC 245


>gi|88705571|ref|ZP_01103281.1| ribonucleoside-diphosphate reductase, beta subunit [Congregibacter
           litoralis KT71]
 gi|88700084|gb|EAQ97193.1| ribonucleoside-diphosphate reductase, beta subunit [Congregibacter
           litoralis KT71]
          Length = 469

 Score =  243 bits (620), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 102/169 (60%), Positives = 137/169 (81%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G  RV++D+K M+N R+D+NQL+P KY WAW+KY+  C NHWMP EV M  D+
Sbjct: 123 GLEELEMGASRVSIDEKAMINCRADLNQLVPFKYDWAWQKYIDGCANHWMPQEVNMTADV 182

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           A WK+  GLTDDER ++ R+LG+F++++SLVANN+VLA+YR ++NPECRQYLLRQAFEEA
Sbjct: 183 ATWKNPEGLTDDERRIVLRSLGYFSTADSLVANNLVLAVYRLITNPECRQYLLRQAFEEA 242

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           +H+H +QY I SLG+DEGE+FNMYREVPS+  KA W++ +T  LS P+F
Sbjct: 243 IHTHAYQYCIESLGMDEGEVFNMYREVPSVAKKAAWSISHTHELSDPNF 291


>gi|107021673|ref|YP_620000.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           cenocepacia AU 1054]
 gi|116688619|ref|YP_834242.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           cenocepacia HI2424]
 gi|105891862|gb|ABF75027.1| Ribonucleoside-diphosphate reductase [Burkholderia cenocepacia AU
           1054]
 gi|116646708|gb|ABK07349.1| Ribonucleoside-diphosphate reductase [Burkholderia cenocepacia
           HI2424]
          Length = 382

 Score =  243 bits (620), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 106/186 (56%), Positives = 136/186 (73%)

Query: 9   PIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           P    E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALW
Sbjct: 39  PAGGTEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALW 98

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           K  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+
Sbjct: 99  KDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHT 158

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
           H +QYI+ SLGLDEGE+FN Y EV SI AK  + + +  TL+ P+F         ++L  
Sbjct: 159 HAYQYIVESLGLDEGEIFNAYHEVTSIRAKDEFLIPFIHTLTDPAFKTGTLEADQKLLKS 218

Query: 189 SLRFLC 194
            + F C
Sbjct: 219 LIVFAC 224


>gi|82703584|ref|YP_413150.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosospira
           multiformis ATCC 25196]
 gi|82411649|gb|ABB75758.1| Ribonucleoside-diphosphate reductase [Nitrosospira multiformis ATCC
           25196]
          Length = 408

 Score =  243 bits (620), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 106/180 (58%), Positives = 137/180 (76%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           +RV+V+DKR++N ++DVNQL+P KY WAWEKYL+AC NHWMP E+ M  D+ALWK  NGL
Sbjct: 71  RRVSVEDKRIINCKADVNQLVPFKYKWAWEKYLAACANHWMPQEINMSRDIALWKDPNGL 130

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           T+DER ++KRNLGFF +++SL ANNIVL  YRH++NPECRQYLLRQAFEEA+H+H +QYI
Sbjct: 131 TEDERRIVKRNLGFFVTADSLAANNIVLGTYRHVTNPECRQYLLRQAFEEAIHTHAYQYI 190

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + SLGLDEGE+FN Y EV SI  K  + + +  TL+ PSF         ++L   + F C
Sbjct: 191 VESLGLDEGEIFNAYHEVRSIREKDEFLIPFIDTLTDPSFRTGTLEADQKLLKSLIVFAC 250


>gi|255019898|ref|ZP_05291973.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Acidithiobacillus caldus ATCC 51756]
 gi|254970678|gb|EET28165.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Acidithiobacillus caldus ATCC 51756]
          Length = 374

 Score =  243 bits (619), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 108/176 (61%), Positives = 137/176 (77%), Gaps = 1/176 (0%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           +RV  +DKR++N  +DVNQL+P KY WAW+KYL+AC NHWMP EV M  D+ALWK   GL
Sbjct: 37  ERVRAEDKRIINGSADVNQLVPFKYHWAWDKYLAACANHWMPQEVQMARDIALWKDPKGL 96

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           T+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQYLLRQAFEEA+H+H +QYI
Sbjct: 97  TEDERRIVKRNLGFFTTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYI 156

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSL 190
           + S+GLDEGE+FNMY EVPSI AK  + L + +TL+ PSFH        ++L RSL
Sbjct: 157 VESIGLDEGEIFNMYHEVPSIRAKDEFLLPFIRTLTDPSFHTGTPENDQKLL-RSL 211


>gi|323527395|ref|YP_004229548.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1001]
 gi|323384397|gb|ADX56488.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1001]
          Length = 414

 Score =  243 bits (619), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 107/181 (59%), Positives = 134/181 (74%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+ALWK  NG
Sbjct: 76  EARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEVNMSRDIALWKDPNG 135

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           LT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +QY
Sbjct: 136 LTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQY 195

Query: 134 IITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           I+ SLGLDEGE+FN Y EVPSI AK  + + Y   L+ P+F          +L   + F 
Sbjct: 196 IVESLGLDEGEIFNAYHEVPSIRAKDEFLIPYIHVLTDPAFKTGTLEADQTLLRSLIVFA 255

Query: 194 C 194
           C
Sbjct: 256 C 256


>gi|167564160|ref|ZP_02357076.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           oklahomensis EO147]
          Length = 369

 Score =  243 bits (619), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 106/183 (57%), Positives = 136/183 (74%)

Query: 12  AGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSK 71
           A E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALWK  
Sbjct: 29  ASEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALWKDP 88

Query: 72  NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
           NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +
Sbjct: 89  NGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAY 148

Query: 132 QYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           QYI+ SLGLDEGE+FN Y EV SI AK  + + +  TL+ P+F         ++L   + 
Sbjct: 149 QYIVESLGLDEGEIFNAYHEVSSIRAKDEFLIPFIHTLTDPAFKTGTLEADQKLLKSLIV 208

Query: 192 FLC 194
           F C
Sbjct: 209 FAC 211


>gi|170695324|ref|ZP_02886470.1| Ribonucleoside-diphosphate reductase [Burkholderia graminis C4D1M]
 gi|170139724|gb|EDT07906.1| Ribonucleoside-diphosphate reductase [Burkholderia graminis C4D1M]
          Length = 414

 Score =  243 bits (619), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 107/181 (59%), Positives = 133/181 (73%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+ALWK  NG
Sbjct: 76  EARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEVNMSRDIALWKDPNG 135

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           LT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +QY
Sbjct: 136 LTEDERRVVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQY 195

Query: 134 IITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           I+ SLGLDEGE+FN Y EVPSI AK  + + Y   L+ P F          +L   + F 
Sbjct: 196 IVESLGLDEGEIFNAYHEVPSIRAKDEFLIPYINVLTDPGFKTGTLETDQTLLRSLIVFA 255

Query: 194 C 194
           C
Sbjct: 256 C 256


>gi|30250346|ref|NP_842416.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosomonas
           europaea ATCC 19718]
 gi|30181141|emb|CAD86334.1| Ribonucleotide reductase [Nitrosomonas europaea ATCC 19718]
          Length = 382

 Score =  243 bits (619), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 105/180 (58%), Positives = 137/180 (76%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           +RV+V+DKR++N ++DVNQL+P KY WAWEKYLSAC NHWMP E+ M  D+ALWK  NGL
Sbjct: 45  RRVSVEDKRIINCKADVNQLVPFKYKWAWEKYLSACANHWMPQEINMTRDIALWKDPNGL 104

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           T+DER ++KRNLGFF +++SL ANNIVL  YRH++NPECRQYLLRQAFEEA+H+H +QYI
Sbjct: 105 TEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITNPECRQYLLRQAFEEAIHTHAYQYI 164

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + S+GLDEGE+FN Y E+ SI  K  + + +  TL+ PSF         ++L   + F C
Sbjct: 165 VESIGLDEGEIFNAYHEIGSIRDKDEFLIPFIDTLTDPSFRTGTLETDQQLLKSLIVFAC 224


>gi|209521089|ref|ZP_03269819.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. H160]
 gi|209498472|gb|EDZ98597.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. H160]
          Length = 411

 Score =  242 bits (618), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 109/201 (54%), Positives = 140/201 (69%), Gaps = 7/201 (3%)

Query: 1   MANNTGLSPIQAGEK-------RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNH 53
            AN+  ++P+            RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NH
Sbjct: 53  FANDIAVAPVAHAGNAAAASEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANH 112

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           WMP EV M  D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PEC
Sbjct: 113 WMPQEVNMSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPEC 172

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
           RQ+LLRQAFEEA+H+H +QYI+ SLGLDEGE+FN Y EVPSI AK  + + Y   L+ P+
Sbjct: 173 RQFLLRQAFEEAIHTHAYQYIVESLGLDEGEIFNAYHEVPSIRAKDEFLIPYIHVLTDPA 232

Query: 174 FHYWNKRRRSRILTRSLRFLC 194
           F          +L   + F C
Sbjct: 233 FKTGTLEADQTLLRSLIVFAC 253


>gi|295677726|ref|YP_003606250.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1002]
 gi|295437569|gb|ADG16739.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1002]
          Length = 411

 Score =  242 bits (617), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 109/201 (54%), Positives = 140/201 (69%), Gaps = 7/201 (3%)

Query: 1   MANNTGLSPIQAGEK-------RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNH 53
            AN+  ++P+            RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NH
Sbjct: 53  FANDIAVAPVAHAGNAAAASEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANH 112

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           WMP EV M  D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PEC
Sbjct: 113 WMPQEVNMSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPEC 172

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
           RQ+LLRQAFEEA+H+H +QYI+ SLGLDEGE+FN Y EVPSI AK  + + Y   L+ P+
Sbjct: 173 RQFLLRQAFEEAIHTHAYQYIVESLGLDEGEIFNAYHEVPSIRAKDEFLIPYIHVLTDPA 232

Query: 174 FHYWNKRRRSRILTRSLRFLC 194
           F          +L   + F C
Sbjct: 233 FKTGTLEADQTLLRSLIVFAC 253


>gi|114332419|ref|YP_748641.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosomonas
           eutropha C91]
 gi|114309433|gb|ABI60676.1| Ribonucleoside-diphosphate reductase [Nitrosomonas eutropha C91]
          Length = 377

 Score =  242 bits (617), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 104/180 (57%), Positives = 138/180 (76%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           +RV+V+DKR++N ++DVNQL+P KY WAWEKYLSAC NHWMP E+ M  D+ALWK  NGL
Sbjct: 40  RRVSVEDKRIINCKADVNQLVPFKYKWAWEKYLSACANHWMPQEINMTRDIALWKDPNGL 99

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           T+DER ++KRNLGFF +++SL ANNIVL  YRH++NPECRQYLLRQAFEEA+H+H +QYI
Sbjct: 100 TEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITNPECRQYLLRQAFEEAIHTHAYQYI 159

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + S+GLDEGE+FN Y E+ SI  K  + + +  TL++P+F         ++L   + F C
Sbjct: 160 VESIGLDEGEIFNAYHEIKSIRDKDEFLIPFIDTLTNPTFQTGTLETDQQLLKSLIVFAC 219


>gi|167574685|ref|ZP_02367559.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           oklahomensis C6786]
          Length = 369

 Score =  242 bits (617), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 106/183 (57%), Positives = 136/183 (74%)

Query: 12  AGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSK 71
           A E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALWK  
Sbjct: 29  ASEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALWKDP 88

Query: 72  NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
           NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +
Sbjct: 89  NGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAY 148

Query: 132 QYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           QYI+ SLGLDEGE+FN Y EV SI AK  + + +  TL+ P+F         ++L   + 
Sbjct: 149 QYIVESLGLDEGEIFNAYHEVSSIRAKDEFLIPFIHTLTDPAFKTGTLVADQKLLKSLIV 208

Query: 192 FLC 194
           F C
Sbjct: 209 FAC 211


>gi|329893650|ref|ZP_08269784.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma
           proteobacterium IMCC3088]
 gi|328923577|gb|EGG30889.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma
           proteobacterium IMCC3088]
          Length = 432

 Score =  241 bits (616), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 101/169 (59%), Positives = 137/169 (81%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G  RV+VD+K M+N R+D+NQL+P KY WAW+KY+  C NHWMP E+ M  D+
Sbjct: 86  GLEELELGAARVSVDEKAMINCRADLNQLVPFKYDWAWQKYIDGCANHWMPQEINMTADV 145

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           A WKS + L+DDER ++ R+LG+F++++SLVANN+VL IYR ++NPECRQYLLRQAFEEA
Sbjct: 146 ATWKSADVLSDDERRIVMRSLGYFSTADSLVANNLVLGIYRLITNPECRQYLLRQAFEEA 205

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           +H+H +QY I SLG+DEGE+FNMYRE+PS+  KA W+L +T +LS P+F
Sbjct: 206 IHTHAYQYCIESLGMDEGEVFNMYREIPSVAKKATWSLSHTHSLSDPNF 254


>gi|296160506|ref|ZP_06843322.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. Ch1-1]
 gi|295889255|gb|EFG69057.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. Ch1-1]
          Length = 415

 Score =  241 bits (615), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 111/205 (54%), Positives = 142/205 (69%), Gaps = 11/205 (5%)

Query: 1   MANNTGLSPIQ------AG-----EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSA 49
            AN+  ++P+       AG     E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ 
Sbjct: 53  FANDIAVAPVAHVTNAAAGTAAVSEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAG 112

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
           C NHWMP EV M  D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++
Sbjct: 113 CANHWMPQEVNMSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHIT 172

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
            PECRQ+LLRQAFEEA+H+H +QYI+ SLGLDEGE+FN Y EV SI AK  + + Y   L
Sbjct: 173 APECRQFLLRQAFEEAIHTHAYQYIVESLGLDEGEIFNAYHEVSSIRAKDEFLIPYIHVL 232

Query: 170 SSPSFHYWNKRRRSRILTRSLRFLC 194
           + P+F          +L   + F C
Sbjct: 233 TDPAFKTGTLEADQTLLRSLIVFAC 257


>gi|187925407|ref|YP_001897049.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           phytofirmans PsJN]
 gi|187716601|gb|ACD17825.1| Ribonucleoside-diphosphate reductase [Burkholderia phytofirmans
           PsJN]
          Length = 415

 Score =  241 bits (615), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 109/205 (53%), Positives = 140/205 (68%), Gaps = 11/205 (5%)

Query: 1   MANNTGLSPIQ-----------AGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSA 49
            AN+  ++P+              E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ 
Sbjct: 53  FANDMAVAPVAHVTHAAAETAAVSEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAG 112

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
           C NHWMP EV M  D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++
Sbjct: 113 CANHWMPQEVNMSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHIT 172

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
            PECRQ+LLRQAFEEA+H+H +QYI+ SLGLDEGE+FN Y EV SI AK  + + Y   L
Sbjct: 173 APECRQFLLRQAFEEAIHTHAYQYIVESLGLDEGEIFNAYHEVSSIRAKDEFLIPYIHVL 232

Query: 170 SSPSFHYWNKRRRSRILTRSLRFLC 194
           + P+F          +L   + F C
Sbjct: 233 TDPAFKTGTLEADQTLLRSLIVFAC 257


>gi|91785256|ref|YP_560462.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           xenovorans LB400]
 gi|91689210|gb|ABE32410.1| Ribonucleoside-diphosphate reductase [Burkholderia xenovorans
           LB400]
          Length = 411

 Score =  241 bits (615), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 111/205 (54%), Positives = 142/205 (69%), Gaps = 11/205 (5%)

Query: 1   MANNTGLSPIQ------AG-----EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSA 49
            AN+  ++P+       AG     E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ 
Sbjct: 49  FANDIAVAPVAHVTHAAAGTAAVSEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAG 108

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
           C NHWMP EV M  D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++
Sbjct: 109 CANHWMPQEVNMSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHIT 168

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
            PECRQ+LLRQAFEEA+H+H +QYI+ SLGLDEGE+FN Y EV SI AK  + + Y   L
Sbjct: 169 APECRQFLLRQAFEEAIHTHAYQYIVESLGLDEGEIFNAYHEVSSIRAKDEFLIPYIHVL 228

Query: 170 SSPSFHYWNKRRRSRILTRSLRFLC 194
           + P+F          +L   + F C
Sbjct: 229 TDPAFKTGTLEADQTLLRSLIVFAC 253


>gi|186477386|ref|YP_001858856.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           phymatum STM815]
 gi|184193845|gb|ACC71810.1| Ribonucleoside-diphosphate reductase [Burkholderia phymatum STM815]
          Length = 407

 Score =  240 bits (612), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 106/181 (58%), Positives = 134/181 (74%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           E RVNV DKR++N ++DVNQL+P KY WAWEKYLS C NHWMP E+ M  D+ALWK  NG
Sbjct: 69  EARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLSGCANHWMPQEINMSRDIALWKDPNG 128

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           LT+DER +IKRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +QY
Sbjct: 129 LTEDERRIIKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQY 188

Query: 134 IITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           I+ SLGLDEGE+FN Y EV SI  K  + + +  TL+ P+F         ++L   + F 
Sbjct: 189 IVESLGLDEGEIFNAYHEVQSIRDKDEFLIPFIHTLTDPAFKTGTLEADQKLLKSLIVFA 248

Query: 194 C 194
           C
Sbjct: 249 C 249


>gi|118500933|gb|ABK97635.1| ribonucleoside diphosphate reductase beta subunit [Allochromatium
           vinosum DSM 180]
          Length = 280

 Score =  240 bits (612), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 102/164 (62%), Positives = 132/164 (80%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
           +D+NQL+P KY WAW+KYL AC NHWMP E+ M  DLALWK  +GLT+DERL++KRNLGF
Sbjct: 1   ADLNQLVPFKYDWAWQKYLDACANHWMPQEISMNADLALWKDPHGLTEDERLIVKRNLGF 60

Query: 89  FASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNM 148
           F++++SLVANN+VLA+YRH++NPECRQYLLRQAFEEA+H+H +QY++ SLGLDEGE+FNM
Sbjct: 61  FSTADSLVANNLVLAVYRHITNPECRQYLLRQAFEEALHTHAYQYVVESLGLDEGEIFNM 120

Query: 149 YREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           YREVP++  KA WAL +TQ L+ P F         ++L   + F
Sbjct: 121 YREVPAVARKAEWALPFTQHLADPHFQTGTPENDQKLLCELVAF 164


>gi|291615085|ref|YP_003525242.1| ribonucleoside-diphosphate reductase [Sideroxydans lithotrophicus
           ES-1]
 gi|291585197|gb|ADE12855.1| Ribonucleoside-diphosphate reductase [Sideroxydans lithotrophicus
           ES-1]
          Length = 382

 Score =  239 bits (611), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 104/179 (58%), Positives = 134/179 (74%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           R+ V+DKR++N+ +DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+ALWK+ NGLT
Sbjct: 46  RIRVEDKRIINSSADVNQLVPFKYKWAWEKYLAGCANHWMPQEVNMSADIALWKNPNGLT 105

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           DDER ++KRNLGFF +++SL ANNI L  YRH++NPECRQ+LLRQAFEEA+H+H +QYI+
Sbjct: 106 DDERRLVKRNLGFFTTADSLAANNIALGTYRHITNPECRQFLLRQAFEEAIHTHAYQYIV 165

Query: 136 TSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            SLGLDEGE+FNMY EV SI  K  + L +   L++P F         ++L   + F C
Sbjct: 166 ESLGLDEGEVFNMYHEVQSIRDKDEFLLPFIDVLTNPDFKTGTPENDQKLLRSLIVFAC 224


>gi|158341282|ref|YP_001522354.1| ribonucleotide-diphosphate reductase subunit beta [Acaryochloris
           marina MBIC11017]
 gi|158311523|gb|ABW33134.1| ribonucleoside-diphosphate reductase, beta subunit [Acaryochloris
           marina MBIC11017]
          Length = 384

 Score =  239 bits (610), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 101/180 (56%), Positives = 136/180 (75%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           +R+NV DKR++N ++DVNQL+P KY WAW+KYL+ C NHWMP E+ M  D+ALWK+ +GL
Sbjct: 47  RRINVADKRIINGQTDVNQLVPFKYQWAWDKYLAGCANHWMPQEINMSRDIALWKTTDGL 106

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           T+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQYLLRQAFEEA+H+H +QYI
Sbjct: 107 TEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYI 166

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + SLGLDEGE+FN YREV  I  K  + + + +TL+ P+F         ++L   + F C
Sbjct: 167 VESLGLDEGEIFNAYREVDCIREKDEFLIPFVETLTDPTFETGTPENDQKLLKSLIAFSC 226


>gi|167586060|ref|ZP_02378448.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           ubonensis Bu]
          Length = 403

 Score =  239 bits (609), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 104/179 (58%), Positives = 134/179 (74%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALWK  NGLT
Sbjct: 67  RVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALWKDPNGLT 126

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           +DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +QYI+
Sbjct: 127 EDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYIV 186

Query: 136 TSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            SLGLDEGE+FN Y EV SI AK  + + +  TL+ P+F         ++L   + F C
Sbjct: 187 ESLGLDEGEIFNAYHEVASIRAKDEFLIPFIHTLTDPAFKTGTLEADQKLLKSLIVFAC 245


>gi|163854887|ref|YP_001629185.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella
           petrii DSM 12804]
 gi|163258615|emb|CAP40914.1| ribonucleoside-diphosphate reductase beta chain [Bordetella petrii]
          Length = 396

 Score =  239 bits (609), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 102/183 (55%), Positives = 135/183 (73%)

Query: 12  AGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSK 71
           A   RV V DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALWK+ 
Sbjct: 56  AAAHRVKVADKRIINGKTDVNQLVPFKYKWAWEKYLATCANHWMPQEINMSRDIALWKNP 115

Query: 72  NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
           NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +
Sbjct: 116 NGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAY 175

Query: 132 QYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           QYI+ SL LDE E+FN Y EVPSI AK  + + + + ++ P+FH        ++L   + 
Sbjct: 176 QYIVESLDLDEAEIFNAYNEVPSIRAKDEFLIPFIEAIADPTFHTGTPESDQKLLKSLIV 235

Query: 192 FLC 194
           F C
Sbjct: 236 FAC 238


>gi|160896947|ref|YP_001562529.1| ribonucleotide-diphosphate reductase subunit beta [Delftia
           acidovorans SPH-1]
 gi|160362531|gb|ABX34144.1| Ribonucleoside-diphosphate reductase [Delftia acidovorans SPH-1]
          Length = 363

 Score =  238 bits (608), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 105/180 (58%), Positives = 133/180 (73%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           KRVN  DKR++NA++DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+ALWK  NGL
Sbjct: 26  KRVNAADKRIINAKTDVNQLVPFKYKWAWEKYLATCANHWMPQEVNMNRDIALWKDPNGL 85

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           T+DER +IKRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +QYI
Sbjct: 86  TEDERRIIKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYI 145

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + SLGLDEGE+FN Y EVPSI  K  + + + + +  P+F          +L   + F C
Sbjct: 146 VESLGLDEGEIFNAYLEVPSIRDKDEFLIPFIEAIMDPAFKTGTFETDQTLLKSLIVFAC 205


>gi|330815478|ref|YP_004359183.1| Ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           gladioli BSR3]
 gi|327367871|gb|AEA59227.1| Ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           gladioli BSR3]
          Length = 407

 Score =  238 bits (608), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 104/191 (54%), Positives = 139/191 (72%), Gaps = 4/191 (2%)

Query: 8   SPIQAG----EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
           +P QA     ++RVN+ DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  
Sbjct: 59  APAQASAAGSQERVNIADKRIINGKTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSR 118

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFE
Sbjct: 119 DIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFE 178

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QYI+ SLGLDEGE+FN Y E+ SI  K  + + +  TL+ P+F         
Sbjct: 179 EAIHTHAYQYIVESLGLDEGEMFNAYHEITSIRDKDEFLIPFIHTLTDPAFVTGTPEADQ 238

Query: 184 RILTRSLRFLC 194
           ++L   + F C
Sbjct: 239 KLLKSLIVFAC 249


>gi|302877617|ref|YP_003846181.1| Ribonucleoside-diphosphate reductase [Gallionella capsiferriformans
           ES-2]
 gi|302580406|gb|ADL54417.1| Ribonucleoside-diphosphate reductase [Gallionella capsiferriformans
           ES-2]
          Length = 365

 Score =  238 bits (606), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 107/179 (59%), Positives = 135/179 (75%), Gaps = 1/179 (0%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           R+ V+DKR++N ++DVNQL+P KY WAWEKYL+AC NHWMP EV M  D+ALWKS + L+
Sbjct: 30  RIRVEDKRIINCKADVNQLVPFKYKWAWEKYLAACANHWMPQEVNMTADIALWKS-DKLS 88

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           DDER +IKRNLGFF +++SL ANNIVL  YRH++NPECRQ+LLRQAFEEA+H+H +QYI+
Sbjct: 89  DDERRLIKRNLGFFTTADSLAANNIVLGSYRHITNPECRQFLLRQAFEEAIHTHAYQYIV 148

Query: 136 TSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            SLGLDEGE+FNMY EVPSI  K  + L Y   L++P F          +L   + F C
Sbjct: 149 ESLGLDEGEIFNMYHEVPSIRNKDEFLLPYIDVLTNPEFKTGTPEADQALLRSLIVFAC 207


>gi|297538242|ref|YP_003674011.1| Ribonucleoside-diphosphate reductase [Methylotenera sp. 301]
 gi|297257589|gb|ADI29434.1| Ribonucleoside-diphosphate reductase [Methylotenera sp. 301]
          Length = 376

 Score =  237 bits (605), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 101/179 (56%), Positives = 131/179 (73%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           RVN  DKRM+N ++DVNQL+P KY WAW+KYL+ C NHWMP EV M  D+A WK    L+
Sbjct: 40  RVNASDKRMINGQTDVNQLVPFKYHWAWDKYLAGCANHWMPQEVSMSRDIAQWKDSTALS 99

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           DDERL++KRNLGFF +++SL ANNIVL  YRH++ PECRQYLLRQ FEEA+H+H +QYI+
Sbjct: 100 DDERLIVKRNLGFFTTADSLAANNIVLGTYRHITAPECRQYLLRQGFEEAIHTHAYQYIV 159

Query: 136 TSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            SLGLDE E+FN Y+E+PSI AK ++ + +  TL+ P+F          +L   + F C
Sbjct: 160 ESLGLDESEVFNAYQEIPSIKAKDDFLIPFINTLTDPAFKTGTAEADQELLRSLIVFAC 218


>gi|33593916|ref|NP_881560.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella
           pertussis Tohama I]
 gi|33598411|ref|NP_886054.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella
           parapertussis 12822]
 gi|33603351|ref|NP_890911.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella
           bronchiseptica RB50]
 gi|33563990|emb|CAE43255.1| ribonucleoside-diphosphate reductase beta chain [Bordetella
           pertussis Tohama I]
 gi|33574540|emb|CAE39187.1| ribonucleoside-diphosphate reductase beta chain [Bordetella
           parapertussis]
 gi|33577475|emb|CAE34740.1| ribonucleoside-diphosphate reductase beta chain [Bordetella
           bronchiseptica RB50]
          Length = 398

 Score =  237 bits (605), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 106/193 (54%), Positives = 138/193 (71%), Gaps = 2/193 (1%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           A + G S   AG  RV V DKR++N  +DVNQL+P KY WAWEKYL+ C NHWMP E+ M
Sbjct: 50  AASLGASDATAG--RVKVADKRIINGETDVNQLVPFKYKWAWEKYLATCANHWMPQEINM 107

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D+ALWK+ NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQA
Sbjct: 108 SRDIALWKNPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQA 167

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRR 181
           FEEA+H+H +QYI+ SL LDE E+FN Y EVPSI AK  + + +   ++ P+FH      
Sbjct: 168 FEEAIHTHAYQYIVESLDLDEAEIFNAYNEVPSIRAKDEFLIPFIDAIADPNFHTGTPEA 227

Query: 182 RSRILTRSLRFLC 194
             ++L   + F C
Sbjct: 228 DQKLLKSLIVFAC 240


>gi|238026167|ref|YP_002910398.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           glumae BGR1]
 gi|237875361|gb|ACR27694.1| Ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           glumae BGR1]
          Length = 407

 Score =  236 bits (603), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 101/181 (55%), Positives = 136/181 (75%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           ++RVN+ DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALWK  NG
Sbjct: 69  QERVNIADKRIINGKTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALWKDPNG 128

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           LT+DER +++RNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +QY
Sbjct: 129 LTEDERRIVRRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQY 188

Query: 134 IITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           I+ SLGLDEGE+FN Y EV SI  K  + + +  TL+ P+F    +    ++L   + F 
Sbjct: 189 IVESLGLDEGEIFNAYHEVSSIRDKDEFLIPFIHTLTDPAFVTGTQDADQKLLKSLIVFA 248

Query: 194 C 194
           C
Sbjct: 249 C 249


>gi|121608466|ref|YP_996273.1| ribonucleotide-diphosphate reductase subunit beta
           [Verminephrobacter eiseniae EF01-2]
 gi|121553106|gb|ABM57255.1| Ribonucleoside-diphosphate reductase [Verminephrobacter eiseniae
           EF01-2]
          Length = 399

 Score =  236 bits (603), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 106/199 (53%), Positives = 141/199 (70%), Gaps = 9/199 (4%)

Query: 5   TGLSPIQAG---------EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWM 55
           TG++P  +G         ++RVN  DKR++N ++DVNQL+PLKY WAWEKYL++C NHWM
Sbjct: 43  TGIAPASSGTRHQAPDAAQRRVNAADKRIINGQTDVNQLVPLKYKWAWEKYLASCANHWM 102

Query: 56  PTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQ 115
           P EV M  D+ALWK+  GL+DDER +IKRNLGFF +++SL ANNIVL  YRH++ PECRQ
Sbjct: 103 PQEVNMTRDIALWKTPGGLSDDERRIIKRNLGFFVTADSLAANNIVLGTYRHITAPECRQ 162

Query: 116 YLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFH 175
           +LLRQAFEEA+H+H +QYI+ SLGLDE E+FN Y EV SI  K  + + + + +  P FH
Sbjct: 163 FLLRQAFEEAIHTHAYQYIVESLGLDESEIFNAYNEVRSIRDKDQFLIPFIEAIMDPHFH 222

Query: 176 YWNKRRRSRILTRSLRFLC 194
             +      +L   + F C
Sbjct: 223 TGSAANDQTLLKSLIVFAC 241


>gi|241589542|ref|YP_002979567.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12D]
 gi|240868254|gb|ACS65913.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12D]
          Length = 328

 Score =  236 bits (601), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 106/183 (57%), Positives = 133/183 (72%)

Query: 12  AGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSK 71
           A  KRVNV +KR++N  +DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+ALWK  
Sbjct: 17  ATAKRVNVAEKRIINGATDVNQLVPFKYKWAWEKYLAGCANHWMPQEVNMARDIALWKDP 76

Query: 72  NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
           NGLT+DER +IKRNLGFF +++SL ANNIVL  YRH++ PECRQYLLRQAFEEA+H+H +
Sbjct: 77  NGLTEDERRIIKRNLGFFVTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAY 136

Query: 132 QYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           QYI+ SLGL+E E+FN Y EV SI  K  + + +  TL+ PSF         ++L   + 
Sbjct: 137 QYIVESLGLNEAEIFNAYHEVQSIRDKDEFLIPFIDTLTDPSFKTGTPENDRKLLKSLIV 196

Query: 192 FLC 194
           F C
Sbjct: 197 FAC 199


>gi|299533977|ref|ZP_07047329.1| ribonucleotide-diphosphate reductase subunit beta [Comamonas
           testosteroni S44]
 gi|298717886|gb|EFI58891.1| ribonucleotide-diphosphate reductase subunit beta [Comamonas
           testosteroni S44]
          Length = 363

 Score =  236 bits (601), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 103/180 (57%), Positives = 132/180 (73%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           KRVN  DKR++NA++DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+ALWK  NGL
Sbjct: 26  KRVNAADKRIINAKTDVNQLVPFKYKWAWEKYLATCANHWMPQEVNMTRDIALWKDPNGL 85

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           T+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +QYI
Sbjct: 86  TEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYI 145

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + SLGLDE E+FN Y EV SI  K  + + + + +  P+FH         +L   + F C
Sbjct: 146 VESLGLDESEIFNAYNEVQSIRDKDEFLIPFIEAIMDPNFHTGTPETDQTLLKSLIVFAC 205


>gi|152980709|ref|YP_001354668.1| ribonucleotide-diphosphate reductase subunit beta
           [Janthinobacterium sp. Marseille]
 gi|151280786|gb|ABR89196.1| ribonucleoside-diphosphate reductase beta chain [Janthinobacterium
           sp. Marseille]
          Length = 392

 Score =  236 bits (601), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 101/180 (56%), Positives = 134/180 (74%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           +R++  DKR++N ++DVNQL+P KY WAW+KYL+ C NHWMP E+ MQ D+ LWK+ NGL
Sbjct: 55  RRMDAADKRVINGQTDVNQLVPFKYKWAWDKYLAGCANHWMPQEINMQRDIELWKNPNGL 114

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           TDDER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQYLLRQAFEEA+H+H +QYI
Sbjct: 115 TDDERRLVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYI 174

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + SLGLDEGE+FN Y EV SI  K  + + + +TL+ P F         ++L   + F C
Sbjct: 175 VESLGLDEGEIFNAYNEVESIRDKDQFLIPFIETLTDPEFKTGTTENDQKLLRSLIVFAC 234


>gi|221065168|ref|ZP_03541273.1| Ribonucleoside-diphosphate reductase [Comamonas testosteroni KF-1]
 gi|220710191|gb|EED65559.1| Ribonucleoside-diphosphate reductase [Comamonas testosteroni KF-1]
          Length = 363

 Score =  236 bits (601), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 103/180 (57%), Positives = 132/180 (73%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           KRVN  DKR++NA++DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+ALWK  NGL
Sbjct: 26  KRVNAADKRIINAKTDVNQLVPFKYKWAWEKYLATCANHWMPQEVNMTRDIALWKDPNGL 85

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           T+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +QYI
Sbjct: 86  TEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYI 145

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + SLGLDE E+FN Y EV SI  K  + + + + +  P+FH         +L   + F C
Sbjct: 146 VESLGLDESEIFNAYNEVQSIRDKDEFLIPFIEAIMDPNFHTGTPETDQTLLKSLIVFAC 205


>gi|325983070|ref|YP_004295472.1| ribonucleoside-diphosphate reductase [Nitrosomonas sp. AL212]
 gi|325532589|gb|ADZ27310.1| Ribonucleoside-diphosphate reductase [Nitrosomonas sp. AL212]
          Length = 381

 Score =  235 bits (599), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 104/189 (55%), Positives = 137/189 (72%), Gaps = 2/189 (1%)

Query: 8   SPIQAGE--KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
            P  AG   +R+ V+DK+++N  +DVNQL+P KY WAW+KYL AC NHWMP E+ M  D+
Sbjct: 35  EPAVAGSANRRIAVEDKQIINCNADVNQLVPFKYKWAWDKYLGACANHWMPQEISMSRDI 94

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALW+  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++NPECRQYLLRQAFEEA
Sbjct: 95  ALWRDPNGLTEDERRLVKRNLGFFVTADSLAANNIVLGTYRHITNPECRQYLLRQAFEEA 154

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QYI+ SLGLDEGE+FN Y EV SI  K  + + +  TL++P F         ++
Sbjct: 155 IHTHAYQYIVESLGLDEGEIFNAYHEVSSIRDKDEFLIPFIDTLTNPHFKTGTLETDQQL 214

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 215 LRSLIVFAC 223


>gi|268316001|ref|YP_003289720.1| Ribonucleoside-diphosphate reductase [Rhodothermus marinus DSM
           4252]
 gi|262333535|gb|ACY47332.1| Ribonucleoside-diphosphate reductase [Rhodothermus marinus DSM
           4252]
          Length = 347

 Score =  235 bits (599), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 102/163 (62%), Positives = 133/163 (81%), Gaps = 2/163 (1%)

Query: 13  GEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSK 71
           G +R+ V+DKR++N    DVNQL+P+KY WAWE YL+ C NHWMP+E+PM  D+ LW+S 
Sbjct: 8   GSRRIRVEDKRLINCHEVDVNQLMPIKYAWAWEHYLNGCKNHWMPSEIPMARDIELWRS- 66

Query: 72  NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
           + LTDDERL+I RNLGFFA++ESLV NNIVLAI+RH++NPECRQYLLRQAFEEA+H+H F
Sbjct: 67  DKLTDDERLVILRNLGFFATAESLVGNNIVLAIFRHVTNPECRQYLLRQAFEEAIHTHAF 126

Query: 132 QYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
            YI+ SLGLDEGE+FNMYRE+P++  K  + ++ T+ +  P F
Sbjct: 127 LYIVESLGLDEGEVFNMYREIPAVARKDEFEMELTREVLRPDF 169


>gi|145588393|ref|YP_001154990.1| ribonucleotide-diphosphate reductase subunit beta [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
 gi|145046799|gb|ABP33426.1| Ribonucleoside-diphosphate reductase [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 394

 Score =  234 bits (597), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 106/196 (54%), Positives = 138/196 (70%), Gaps = 6/196 (3%)

Query: 5   TGLSPIQAGEK------RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTE 58
           T  +P++A         RVN  DKR++NA++DVNQL+P KY WAWEKYL+ C NHWMP E
Sbjct: 41  TAPAPVEAANLSGGAALRVNAADKRVINAKTDVNQLVPFKYKWAWEKYLAGCANHWMPQE 100

Query: 59  VPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLL 118
           + M  D+ALWK  NGLT+DER +IKRNLGFF +++SL ANNIVL  YRH++ PECRQYLL
Sbjct: 101 INMNRDIALWKDPNGLTEDERRIIKRNLGFFTTADSLAANNIVLGTYRHITAPECRQYLL 160

Query: 119 RQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWN 178
           RQAFEEA+H+H +QYI+ SLGLD+ E+FN Y E+ SI AK  + + Y   L++P+F    
Sbjct: 161 RQAFEEAIHTHAYQYIVESLGLDQSEIFNAYNEIESIRAKDEFLIPYIDVLTNPNFKTGT 220

Query: 179 KRRRSRILTRSLRFLC 194
                 +L   + F C
Sbjct: 221 LETDQTLLRSLIVFAC 236


>gi|300703002|ref|YP_003744604.1| ribonucleoside diphosphate reductase 1 subunit beta, ferritin-like
           [Ralstonia solanacearum CFBP2957]
 gi|299070665|emb|CBJ41960.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Ralstonia solanacearum CFBP2957]
          Length = 402

 Score =  234 bits (596), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 106/194 (54%), Positives = 136/194 (70%), Gaps = 1/194 (0%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           + NN   +  Q+  +RVN  DKR++N  +DVNQL+P KY WAWEKYL+ C NHWMP E+ 
Sbjct: 52  LGNNPNAAAAQSN-RRVNAADKRVINGATDVNQLVPFKYKWAWEKYLAGCANHWMPQEIN 110

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK  NGLT+DER +IKRNLGFF +++SL ANNIVL  YR ++ PECRQYLLRQ
Sbjct: 111 MSRDIALWKDPNGLTEDERRIIKRNLGFFVTADSLAANNIVLGTYRQITAPECRQYLLRQ 170

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYI+ SLGLDE E+FN Y EV SI  K  + + +  TL+ PSF      
Sbjct: 171 AFEEAIHTHAYQYIVESLGLDEAEIFNAYHEVQSIRDKDEFLIPFIDTLTDPSFKTGTPE 230

Query: 181 RRSRILTRSLRFLC 194
              ++L   + F C
Sbjct: 231 NDQKLLKSLIVFAC 244


>gi|332110818|gb|EGJ10995.1| ribonucleotide-diphosphate reductase subunit beta [Rubrivivax
           benzoatilyticus JA2]
          Length = 385

 Score =  233 bits (595), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 105/195 (53%), Positives = 136/195 (69%), Gaps = 5/195 (2%)

Query: 5   TGLSPIQ-----AGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEV 59
           T  SP+      A  +RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP EV
Sbjct: 33  TNASPVSRPAATAHTRRVNVADKRIINGQTDVNQLVPFKYKWAWEKYLATCANHWMPQEV 92

Query: 60  PMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLR 119
            M  D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLR
Sbjct: 93  NMSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLR 152

Query: 120 QAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNK 179
           QAFEEA+H+H +QYI+ SLGLDEGE+FN Y EV +I  K  + + +   +  P+F     
Sbjct: 153 QAFEEAIHTHAYQYIVESLGLDEGEIFNAYHEVAAIRDKDEFLIPFIDAIMDPAFSTGTP 212

Query: 180 RRRSRILTRSLRFLC 194
                +L   + F C
Sbjct: 213 EADQTLLKSLIVFAC 227


>gi|294339031|emb|CAZ87378.1| putative Ribonucleoside-diphosphate reductase (ribonucleoside
           diphosphate reductase, beta subunit) [Thiomonas sp. 3As]
          Length = 410

 Score =  233 bits (595), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 106/187 (56%), Positives = 136/187 (72%), Gaps = 4/187 (2%)

Query: 12  AGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSK 71
           A   RV  +DKR++N   DVNQL+P KY WAW+KYL++C NHWMP EV M  D+A+WK  
Sbjct: 66  ASTARVRAEDKRIINCSVDVNQLVPFKYKWAWDKYLASCANHWMPQEVNMSRDIAMWKDP 125

Query: 72  NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
           NGLTDDERL+IKRNLGFF +++SL ANNIVL  YRH++NPECRQYLLRQAFEEA+H+H +
Sbjct: 126 NGLTDDERLIIKRNLGFFTTADSLAANNIVLGTYRHITNPECRQYLLRQAFEEAIHTHAY 185

Query: 132 QYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFH---YWNKRRRSRILTR 188
           QYI+ S+GLDE E+FN Y E+ SI  K  + + +  TL++P F    +    R  + L R
Sbjct: 186 QYIVESIGLDESEIFNSYHEITSIREKDEFLIPFIDTLTNPEFRTSAFGGSERNDQELLR 245

Query: 189 S-LRFLC 194
           S + F C
Sbjct: 246 SIIVFAC 252


>gi|300309722|ref|YP_003773814.1| transmembrane ribonucleoside reductase small subunit
           [Herbaspirillum seropedicae SmR1]
 gi|300072507|gb|ADJ61906.1| transmembrane ribonucleoside reductase (small chain) protein
           [Herbaspirillum seropedicae SmR1]
          Length = 388

 Score =  233 bits (595), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 101/180 (56%), Positives = 131/180 (72%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           +RVN  DKR++N  +DVNQL+P KY WAW+KYL+ C NHWMP E+ MQ D+ LWK+ NGL
Sbjct: 51  RRVNAADKRIINGHTDVNQLVPFKYKWAWDKYLAGCANHWMPQEINMQRDIELWKNPNGL 110

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           T+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQYLLRQAFEEA+H+H +QYI
Sbjct: 111 TEDERRLVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYI 170

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + SLGLDE E+FN Y EV SI  K  + + +  TL+ P F         ++L   + F C
Sbjct: 171 VESLGLDEAEIFNAYHEVASIRDKDEFLIPFIDTLTDPEFKTGTMENDQKLLKSLIVFAC 230


>gi|124268397|ref|YP_001022401.1| ribonucleotide-diphosphate reductase subunit beta [Methylibium
           petroleiphilum PM1]
 gi|124261172|gb|ABM96166.1| Ribonucleoside-diphosphate reductase [Methylibium petroleiphilum
           PM1]
          Length = 403

 Score =  233 bits (594), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 103/183 (56%), Positives = 132/183 (72%)

Query: 12  AGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSK 71
           AG +RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+A WK  
Sbjct: 63  AGTRRVNVADKRIINGQTDVNQLVPFKYKWAWEKYLATCANHWMPQEVNMSRDIATWKDP 122

Query: 72  NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
           NGL++DER +IKRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +
Sbjct: 123 NGLSEDERRIIKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAY 182

Query: 132 QYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           QYI+ SLGLDE E+FN Y EV SI  K  + + +   +  P+FH         +L   + 
Sbjct: 183 QYIVESLGLDESEIFNAYNEVQSIRDKDEFLIPFIGAIMDPNFHTGTLENDRTLLKSLIV 242

Query: 192 FLC 194
           F C
Sbjct: 243 FAC 245


>gi|89902117|ref|YP_524588.1| ribonucleotide-diphosphate reductase subunit beta [Rhodoferax
           ferrireducens T118]
 gi|89346854|gb|ABD71057.1| Ribonucleoside-diphosphate reductase [Rhodoferax ferrireducens
           T118]
          Length = 400

 Score =  233 bits (593), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 105/193 (54%), Positives = 136/193 (70%), Gaps = 1/193 (0%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           AN  G + +    +RVN  DKR++N ++DVNQL+P KY WAWEKYLS+C NHWMP EV M
Sbjct: 51  ANQRG-AAVSISPRRVNAADKRIINGKTDVNQLVPFKYKWAWEKYLSSCANHWMPQEVNM 109

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D+ALWK  NGLT+DER +IKRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQA
Sbjct: 110 TRDIALWKDPNGLTEDERRIIKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQA 169

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRR 181
           FEEA+H+H +QYI+ SLGLDE E+FN Y EV SI  K  + + + + +  P+F       
Sbjct: 170 FEEAIHTHAYQYIVESLGLDESEIFNAYNEVQSIRDKDEFLIPFIEAIMDPAFKTGTHEA 229

Query: 182 RSRILTRSLRFLC 194
              +L   + F C
Sbjct: 230 DQTLLKSLIVFAC 242


>gi|226940720|ref|YP_002795794.1| ribonucleotide-diphosphate reductase subunit beta [Laribacter
           hongkongensis HLHK9]
 gi|226715647|gb|ACO74785.1| Ribonucleoside-diphosphate reductase beta chain [Laribacter
           hongkongensis HLHK9]
          Length = 357

 Score =  233 bits (593), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 105/191 (54%), Positives = 134/191 (70%), Gaps = 1/191 (0%)

Query: 5   TGLSPIQAGEK-RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
             +SP  +G   RVN  DKR++N  +DVNQL+P KY WAW+KYL+ C NHWMP EV MQ 
Sbjct: 9   VAVSPAGSGTGGRVNAVDKRIINGDTDVNQLVPFKYHWAWDKYLATCANHWMPQEVNMQR 68

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ LWK  NGLTDDER ++ RNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFE
Sbjct: 69  DIELWKRPNGLTDDERRIVIRNLGFFTTADSLAANNIVLGTYRHITAPECRQFLLRQAFE 128

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QYI+ SLGLDEGE+FN Y E+ SI AK  + + +  TL  P+F         
Sbjct: 129 EAIHTHAYQYIVESLGLDEGEVFNAYHEIASIRAKDEFLIPFIDTLCDPAFKTGTPESDQ 188

Query: 184 RILTRSLRFLC 194
            +L   + F C
Sbjct: 189 LLLKSLIVFAC 199


>gi|296135014|ref|YP_003642256.1| Ribonucleoside-diphosphate reductase [Thiomonas intermedia K12]
 gi|295795136|gb|ADG29926.1| Ribonucleoside-diphosphate reductase [Thiomonas intermedia K12]
          Length = 402

 Score =  233 bits (593), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 105/187 (56%), Positives = 136/187 (72%), Gaps = 4/187 (2%)

Query: 12  AGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSK 71
           A   RV  +DKR++N   DVNQL+P KY WAW+KYL++C NHWMP E+ M  D+A+WK  
Sbjct: 58  ASTARVRAEDKRIINCSVDVNQLVPFKYKWAWDKYLASCANHWMPQEINMSRDIAMWKDP 117

Query: 72  NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
           NGLTDDERL+IKRNLGFF +++SL ANNIVL  YRH++NPECRQYLLRQAFEEA+H+H +
Sbjct: 118 NGLTDDERLIIKRNLGFFTTADSLAANNIVLGTYRHITNPECRQYLLRQAFEEAIHTHAY 177

Query: 132 QYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFH---YWNKRRRSRILTR 188
           QYI+ S+GLDE E+FN Y E+ SI  K  + + +  TL++P F    +    R  + L R
Sbjct: 178 QYIVESIGLDESEIFNSYHEIASIRDKDEFLIPFIDTLTNPEFRTSAFGGSERNDQELLR 237

Query: 189 S-LRFLC 194
           S + F C
Sbjct: 238 SIIVFAC 244


>gi|134095932|ref|YP_001101007.1| ribonucleotide-diphosphate reductase subunit beta [Herminiimonas
           arsenicoxydans]
 gi|133739835|emb|CAL62886.1| Ribonucleoside-diphosphate reductase subunit beta (Ribonucleotide
           reductase small subunit) [Herminiimonas arsenicoxydans]
          Length = 395

 Score =  233 bits (593), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 105/202 (51%), Positives = 138/202 (68%), Gaps = 9/202 (4%)

Query: 2   ANNTGLSP-IQAGEKRVNVD--------DKRMLNARSDVNQLLPLKYGWAWEKYLSACNN 52
           A +  L P + AG+    VD        DKR++N ++DVNQL+P KY WAW+KYL+ C N
Sbjct: 36  AQDVALDPAVMAGKPAATVDPTRRMDAADKRIINGKTDVNQLVPFKYKWAWDKYLAGCAN 95

Query: 53  HWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPE 112
           HWMP E+ MQ D+ LWK+ NGLTDDER ++KRNLGFF +++SL ANNIVL  YRH++ PE
Sbjct: 96  HWMPQEINMQRDIELWKNPNGLTDDERRLVKRNLGFFVTADSLAANNIVLGTYRHITAPE 155

Query: 113 CRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSP 172
           CRQYLLRQAFEEA+H+H +QYI+ SLGLDEGE+FN Y E+ SI  K  + + +   L+ P
Sbjct: 156 CRQYLLRQAFEEAIHTHAYQYIVESLGLDEGEIFNAYNEIESIRDKDQFLIPFIDVLTDP 215

Query: 173 SFHYWNKRRRSRILTRSLRFLC 194
           +F          +L   + F C
Sbjct: 216 NFTTGTTENDQTLLRSLIVFAC 237


>gi|241764092|ref|ZP_04762129.1| Ribonucleoside-diphosphate reductase [Acidovorax delafieldii 2AN]
 gi|241366556|gb|EER61044.1| Ribonucleoside-diphosphate reductase [Acidovorax delafieldii 2AN]
          Length = 398

 Score =  232 bits (592), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 102/180 (56%), Positives = 131/180 (72%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           +RVN  DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+ALWK  NGL
Sbjct: 61  RRVNAADKRIINGQTDVNQLVPFKYKWAWEKYLATCANHWMPQEVNMTRDIALWKDPNGL 120

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           TDDER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +QYI
Sbjct: 121 TDDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYI 180

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + SLGLDE E+FN Y EV SI  K  + + + + +  P+F         R+L   + F C
Sbjct: 181 VESLGLDESEIFNAYNEVQSIRDKDEFLIPFIEAIMDPNFKTGTPEADQRLLKSLIVFAC 240


>gi|121606275|ref|YP_983604.1| ribonucleotide-diphosphate reductase subunit beta [Polaromonas
           naphthalenivorans CJ2]
 gi|120595244|gb|ABM38683.1| Ribonucleoside-diphosphate reductase [Polaromonas naphthalenivorans
           CJ2]
          Length = 387

 Score =  232 bits (592), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 103/185 (55%), Positives = 131/185 (70%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           I A  KRV   DKR++N ++DVNQL+P KY WAWEKYL++C NHWMP EV M  D+ALWK
Sbjct: 45  IPAKAKRVKASDKRIINGQTDVNQLVPFKYKWAWEKYLASCANHWMPQEVNMTRDIALWK 104

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
             NGL+DDER ++ RNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H
Sbjct: 105 DPNGLSDDERRLVMRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTH 164

Query: 130 TFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRS 189
            +QYI  SLGLDEGE+FN Y EV SI  K  + + + + +S P F          +L   
Sbjct: 165 AYQYITESLGLDEGEIFNAYNEVQSIKDKDQFLIPFIEAISDPGFKTGTLESDQTLLKSL 224

Query: 190 LRFLC 194
           + F C
Sbjct: 225 IVFAC 229


>gi|299065648|emb|CBJ36820.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Ralstonia solanacearum CMR15]
          Length = 398

 Score =  232 bits (592), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 105/194 (54%), Positives = 136/194 (70%), Gaps = 1/194 (0%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           + NN   +  Q+  +RVN  DKR++N  +DVNQL+P KY WAWEKYL+ C NHWMP E+ 
Sbjct: 48  LGNNPNAAAAQSS-RRVNAADKRVINGATDVNQLVPFKYKWAWEKYLAGCANHWMPQEIN 106

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK  NGLT+DER +IKRNLGFF +++SL ANNIVL  YR ++ PECRQYLLRQ
Sbjct: 107 MSRDIALWKDPNGLTEDERRIIKRNLGFFVTADSLAANNIVLGTYRQITAPECRQYLLRQ 166

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYI+ SLGL+E E+FN Y EV SI  K  + + +  TL+ PSF      
Sbjct: 167 AFEEAIHTHAYQYIVESLGLNEAEIFNAYHEVQSIRDKDEFLIPFIDTLTDPSFKTGTPE 226

Query: 181 RRSRILTRSLRFLC 194
              ++L   + F C
Sbjct: 227 NDQKLLKSLIVFAC 240


>gi|317402620|gb|EFV83180.1| ribonucleoside-diphosphate reductase subunit beta [Achromobacter
           xylosoxidans C54]
          Length = 399

 Score =  232 bits (592), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 101/183 (55%), Positives = 133/183 (72%)

Query: 12  AGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSK 71
           A  +RV V DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALWK+ 
Sbjct: 59  ATSQRVKVADKRIINGQTDVNQLVPFKYKWAWEKYLATCANHWMPQEINMSRDIALWKNP 118

Query: 72  NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
           NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +
Sbjct: 119 NGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAY 178

Query: 132 QYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           QYI+ SL LDE E+FN Y EVPSI AK  + + +   ++ P+F          +L   + 
Sbjct: 179 QYIVESLDLDEAEIFNAYNEVPSIRAKDEFLIPFIDAIADPNFKTGTPEADQTLLKSLIV 238

Query: 192 FLC 194
           F C
Sbjct: 239 FAC 241


>gi|17547523|ref|NP_520925.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
           solanacearum GMI1000]
 gi|17429827|emb|CAD16511.1| putative transmembrane ribonucleoside reductase (small chain)
           oxidoreductase protein [Ralstonia solanacearum GMI1000]
          Length = 400

 Score =  232 bits (592), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 105/194 (54%), Positives = 136/194 (70%), Gaps = 1/194 (0%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           + NN   +  Q+  +RVN  DKR++N  +DVNQL+P KY WAWEKYL+ C NHWMP E+ 
Sbjct: 50  LGNNPNAAAAQSS-RRVNAADKRVINGATDVNQLVPFKYKWAWEKYLAGCANHWMPQEIN 108

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK  NGLT+DER +IKRNLGFF +++SL ANNIVL  YR ++ PECRQYLLRQ
Sbjct: 109 MSRDIALWKDPNGLTEDERRIIKRNLGFFVTADSLAANNIVLGTYRQITAPECRQYLLRQ 168

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYI+ SLGL+E E+FN Y EV SI  K  + + +  TL+ PSF      
Sbjct: 169 AFEEAIHTHAYQYIVESLGLNEAEIFNAYHEVQSIRDKDEFLIPFIDTLTDPSFKTGTPE 228

Query: 181 RRSRILTRSLRFLC 194
              ++L   + F C
Sbjct: 229 NDQKLLKSLIVFAC 242


>gi|94312018|ref|YP_585228.1| ribonucleotide-diphosphate reductase subunit beta [Cupriavidus
           metallidurans CH34]
 gi|93355870|gb|ABF09959.1| Ribonucleoside-diphosphate reductase beta subunit [Cupriavidus
           metallidurans CH34]
          Length = 395

 Score =  232 bits (591), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 105/194 (54%), Positives = 136/194 (70%), Gaps = 1/194 (0%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           + NN   +  Q+  +RVN  DKR++N  +DVNQL+P KY WAWEKYL+ C NHWMP E+ 
Sbjct: 45  LGNNPNAAAAQS-TRRVNAADKRVINGATDVNQLVPFKYKWAWEKYLAGCANHWMPQEIN 103

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK  NGLT+DER +IKRNLGFF +++SL ANNIVL  YR ++ PECRQYLLRQ
Sbjct: 104 MSRDIALWKDPNGLTEDERRIIKRNLGFFVTADSLAANNIVLGTYRQITAPECRQYLLRQ 163

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYI+ SLGL+E E+FN Y EV SI  K  + + +  TL+ PSF      
Sbjct: 164 AFEEAIHTHAYQYIVESLGLNEAEIFNAYHEVQSIRDKDEFLIPFIDTLTDPSFKTGTPE 223

Query: 181 RRSRILTRSLRFLC 194
              ++L   + F C
Sbjct: 224 NDQKLLKSLIVFAC 237


>gi|194290770|ref|YP_002006677.1| ribonucleotide-diphosphate reductase subunit beta [Cupriavidus
           taiwanensis LMG 19424]
 gi|193224605|emb|CAQ70616.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Cupriavidus taiwanensis LMG 19424]
          Length = 396

 Score =  232 bits (591), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 105/194 (54%), Positives = 136/194 (70%), Gaps = 1/194 (0%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           + NN   +  Q+  +RVN  DKR++N  +DVNQL+P KY WAWEKYL+ C NHWMP E+ 
Sbjct: 46  LGNNPNAAAAQSN-RRVNAADKRVINGSTDVNQLVPFKYKWAWEKYLAGCANHWMPQEIN 104

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK  NGLT+DER +IKRNLGFF +++SL ANNIVL  YR ++ PECRQYLLRQ
Sbjct: 105 MSRDIALWKDPNGLTEDERRIIKRNLGFFVTADSLAANNIVLGTYRQITAPECRQYLLRQ 164

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYI+ SLGL+E E+FN Y EV SI  K  + + +  TL+ PSF      
Sbjct: 165 AFEEAIHTHAYQYIVESLGLNEAEIFNAYHEVQSIRDKDEFLIPFIDTLTDPSFKTGTPE 224

Query: 181 RRSRILTRSLRFLC 194
              ++L   + F C
Sbjct: 225 NDQKLLKSLIVFAC 238


>gi|300690381|ref|YP_003751376.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Ralstonia solanacearum PSI07]
 gi|299077441|emb|CBJ50067.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Ralstonia solanacearum PSI07]
          Length = 402

 Score =  232 bits (591), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 105/194 (54%), Positives = 136/194 (70%), Gaps = 1/194 (0%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           + NN   +  Q+  +RVN  DKR++N  +DVNQL+P KY WAWEKYL+ C NHWMP E+ 
Sbjct: 52  LGNNPNAAAAQSN-RRVNAADKRVINGATDVNQLVPFKYKWAWEKYLAGCANHWMPQEIN 110

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK  NGLT+DER +IKRNLGFF +++SL ANNIVL  YR ++ PECRQYLLRQ
Sbjct: 111 MSRDIALWKDPNGLTEDERRIIKRNLGFFVTADSLAANNIVLGTYRQITAPECRQYLLRQ 170

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYI+ SLGL+E E+FN Y EV SI  K  + + +  TL+ PSF      
Sbjct: 171 AFEEAIHTHAYQYIVESLGLNEAEIFNAYHEVQSIRDKDEFLIPFIDTLTDPSFKTGTPE 230

Query: 181 RRSRILTRSLRFLC 194
              ++L   + F C
Sbjct: 231 NDQKLLKSLIVFAC 244


>gi|83746810|ref|ZP_00943858.1| Ribonucleoside-diphosphate reductase beta chain [Ralstonia
           solanacearum UW551]
 gi|207721465|ref|YP_002251905.1| transmembrane ribonucleoside reductase (small chain) protein
           [Ralstonia solanacearum MolK2]
 gi|83726579|gb|EAP73709.1| Ribonucleoside-diphosphate reductase beta chain [Ralstonia
           solanacearum UW551]
 gi|206586625|emb|CAQ17211.1| transmembrane ribonucleoside reductase (small chain) protein
           [Ralstonia solanacearum MolK2]
          Length = 402

 Score =  232 bits (591), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 105/194 (54%), Positives = 136/194 (70%), Gaps = 1/194 (0%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           + NN   +  Q+  +RVN  DKR++N  +DVNQL+P KY WAWEKYL+ C NHWMP E+ 
Sbjct: 52  LGNNPNAAAAQSN-RRVNAADKRVINGATDVNQLVPFKYKWAWEKYLAGCANHWMPQEIN 110

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK  NGLT+DER +IKRNLGFF +++SL ANNIVL  YR ++ PECRQYLLRQ
Sbjct: 111 MSRDIALWKDPNGLTEDERRIIKRNLGFFVTADSLAANNIVLGTYRQITAPECRQYLLRQ 170

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYI+ SLGL+E E+FN Y EV SI  K  + + +  TL+ PSF      
Sbjct: 171 AFEEAIHTHAYQYIVESLGLNEAEIFNAYHEVQSIRDKDEFLIPFIDTLTDPSFKTGTPE 230

Query: 181 RRSRILTRSLRFLC 194
              ++L   + F C
Sbjct: 231 NDQKLLKSLIVFAC 244


>gi|239813962|ref|YP_002942872.1| ribonucleotide-diphosphate reductase subunit beta [Variovorax
           paradoxus S110]
 gi|239800539|gb|ACS17606.1| Ribonucleoside-diphosphate reductase [Variovorax paradoxus S110]
          Length = 391

 Score =  232 bits (591), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 101/179 (56%), Positives = 129/179 (72%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           RV   DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+ALWK  NGLT
Sbjct: 55  RVKASDKRIINGQTDVNQLVPFKYKWAWEKYLATCANHWMPQEVNMTRDIALWKDPNGLT 114

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           +DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +QYI+
Sbjct: 115 EDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYIV 174

Query: 136 TSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            SLGLDE E+FN Y EVPSI  K  + + +   +S P+F          +L   + F C
Sbjct: 175 ESLGLDESEIFNAYNEVPSIREKDQFLIPFIDAISDPNFKTGTHETDQTLLKSLIVFAC 233


>gi|218665361|ref|YP_002427016.1| ribonucleoside-diphosphate reductase, beta subunit
           [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|218517574|gb|ACK78160.1| ribonucleoside-diphosphate reductase, beta subunit
           [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 380

 Score =  231 bits (590), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 96/160 (60%), Positives = 126/160 (78%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           +RV  +DKR++N  +DVNQL+P KY WAW+KYL+AC NHWMP E+ M  D+ALWK   GL
Sbjct: 43  ERVRAEDKRIINGHADVNQLVPFKYQWAWDKYLAACANHWMPQEIQMSRDIALWKDPKGL 102

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           T+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQY+LRQAFEEA+H+H +QYI
Sbjct: 103 TEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQYMLRQAFEEAIHTHAYQYI 162

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           + S+GLDEGE+FNMY EVPS+  K  + + +   L+ P F
Sbjct: 163 VESIGLDEGEIFNMYHEVPSVRDKDQFLMPFIDVLADPHF 202


>gi|171463021|ref|YP_001797134.1| Ribonucleoside-diphosphate reductase [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|171192559|gb|ACB43520.1| Ribonucleoside-diphosphate reductase [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 394

 Score =  231 bits (590), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 102/179 (56%), Positives = 131/179 (73%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           RV   DKR++NA++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALWK  NGLT
Sbjct: 58  RVKAADKRVINAKTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMNRDIALWKDPNGLT 117

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           +DER +IKRNLGFF +++SL ANNIVL  YRH++ PECRQYLLRQAFEEA+H+H +QYI+
Sbjct: 118 EDERRIIKRNLGFFTTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIV 177

Query: 136 TSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            SLGLD+ E+FN Y E+ SI AK  + + Y   L++P+F          +L   + F C
Sbjct: 178 ESLGLDQSEIFNAYHEIDSIRAKDEFLIPYIDVLTNPNFKTGTLEADQTLLRSLIVFAC 236


>gi|198284354|ref|YP_002220675.1| ribonucleotide-diphosphate reductase subunit beta
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|198248875|gb|ACH84468.1| Ribonucleoside-diphosphate reductase [Acidithiobacillus
           ferrooxidans ATCC 53993]
          Length = 374

 Score =  231 bits (590), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 96/160 (60%), Positives = 126/160 (78%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           +RV  +DKR++N  +DVNQL+P KY WAW+KYL+AC NHWMP E+ M  D+ALWK   GL
Sbjct: 37  ERVRAEDKRIINGHADVNQLVPFKYQWAWDKYLAACANHWMPQEIQMSRDIALWKDPKGL 96

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           T+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQY+LRQAFEEA+H+H +QYI
Sbjct: 97  TEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQYMLRQAFEEAIHTHAYQYI 156

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           + S+GLDEGE+FNMY EVPS+  K  + + +   L+ P F
Sbjct: 157 VESIGLDEGEIFNMYHEVPSVRDKDQFLMPFIDVLADPHF 196


>gi|113869188|ref|YP_727677.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
           eutropha H16]
 gi|113527964|emb|CAJ94309.1| Ribonucleoside-diphosphate reductase beta subunit [Ralstonia
           eutropha H16]
          Length = 395

 Score =  231 bits (590), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 102/180 (56%), Positives = 130/180 (72%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           +RVN  DKR++N  +DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALWK  NGL
Sbjct: 58  RRVNAADKRVINGSTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALWKDPNGL 117

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           T+DER +IKRNLGFF +++SL ANNIVL  YR ++ PECRQYLLRQAFEEA+H+H +QYI
Sbjct: 118 TEDERRIIKRNLGFFVTADSLAANNIVLGTYRQITAPECRQYLLRQAFEEAIHTHAYQYI 177

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + SLGL+E E+FN Y EV SI  K  + + +  TL+ PSF         ++L   + F C
Sbjct: 178 VESLGLNEAEIFNAYHEVQSIRDKDEFLIPFIDTLTDPSFKTGTPENDQKLLKSLIVFAC 237


>gi|207744360|ref|YP_002260752.1| transmembrane ribonucleoside reductase (small chain) protein
           [Ralstonia solanacearum IPO1609]
 gi|206595765|emb|CAQ62692.1| transmembrane ribonucleoside reductase (small chain) protein
           [Ralstonia solanacearum IPO1609]
          Length = 410

 Score =  231 bits (590), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 105/194 (54%), Positives = 136/194 (70%), Gaps = 1/194 (0%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           + NN   +  Q+  +RVN  DKR++N  +DVNQL+P KY WAWEKYL+ C NHWMP E+ 
Sbjct: 60  LGNNPNAAAAQSN-RRVNAADKRVINGATDVNQLVPFKYKWAWEKYLAGCANHWMPQEIN 118

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK  NGLT+DER +IKRNLGFF +++SL ANNIVL  YR ++ PECRQYLLRQ
Sbjct: 119 MSRDIALWKDPNGLTEDERRIIKRNLGFFVTADSLAANNIVLGTYRQITAPECRQYLLRQ 178

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYI+ SLGL+E E+FN Y EV SI  K  + + +  TL+ PSF      
Sbjct: 179 AFEEAIHTHAYQYIVESLGLNEAEIFNAYHEVQSIRDKDEFLIPFIDTLTDPSFKTGTPE 238

Query: 181 RRSRILTRSLRFLC 194
              ++L   + F C
Sbjct: 239 NDQKLLKSLIVFAC 252


>gi|187479453|ref|YP_787478.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella avium
           197N]
 gi|115424040|emb|CAJ50593.1| ribonucleoside-diphosphate reductase beta chain [Bordetella avium
           197N]
          Length = 394

 Score =  231 bits (590), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 100/180 (55%), Positives = 132/180 (73%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           +RV V DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALWK+ NGL
Sbjct: 57  QRVKVADKRIINGQTDVNQLVPFKYKWAWEKYLATCANHWMPQEINMSRDIALWKNPNGL 116

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           T+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +QYI
Sbjct: 117 TEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYI 176

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + SL LDE E+FN Y EVPSI AK  + + +   ++ P+F          +L   + F C
Sbjct: 177 VESLDLDESEIFNAYNEVPSIRAKDEFLIPFIDAIADPNFKTGTPEADQTLLKSLIVFAC 236


>gi|319764328|ref|YP_004128265.1| ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans
           BC]
 gi|330826374|ref|YP_004389677.1| ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans
           K601]
 gi|317118889|gb|ADV01378.1| Ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans
           BC]
 gi|329311746|gb|AEB86161.1| Ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans
           K601]
          Length = 396

 Score =  231 bits (590), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 100/180 (55%), Positives = 132/180 (73%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           +RV+  DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALWK  NGL
Sbjct: 59  RRVSAVDKRIINGQTDVNQLVPFKYKWAWEKYLATCANHWMPQEINMTRDIALWKDPNGL 118

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           T+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +QYI
Sbjct: 119 TEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYI 178

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + SLGLDEGE+FN Y EV SI AK  + + + + +  P+F          +L   + F C
Sbjct: 179 VESLGLDEGEIFNAYNEVESIRAKDEFLIPFIEAIMDPAFKTGTPENDQTLLKSLIVFAC 238


>gi|241664219|ref|YP_002982579.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
           pickettii 12D]
 gi|309783064|ref|ZP_07677783.1| ribonucleoside-diphosphate reductase, beta subunit [Ralstonia sp.
           5_7_47FAA]
 gi|240866246|gb|ACS63907.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12D]
 gi|308918172|gb|EFP63850.1| ribonucleoside-diphosphate reductase, beta subunit [Ralstonia sp.
           5_7_47FAA]
          Length = 402

 Score =  231 bits (589), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 102/180 (56%), Positives = 130/180 (72%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           +RVN  DKR++N  +DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALWK  NGL
Sbjct: 65  RRVNAADKRVINGATDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALWKDPNGL 124

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           T+DER +IKRNLGFF +++SL ANNIVL  YR ++ PECRQYLLRQAFEEA+H+H +QYI
Sbjct: 125 TEDERRIIKRNLGFFVTADSLAANNIVLGTYRQITAPECRQYLLRQAFEEAIHTHAYQYI 184

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + SLGL+E E+FN Y EV SI  K  + + +  TL+ PSF         ++L   + F C
Sbjct: 185 VESLGLNEAEIFNAYHEVQSIRDKDEFLIPFIDTLTDPSFKTGTPENDQKLLKSLIVFAC 244


>gi|311103857|ref|YP_003976710.1| ribonucleoside-diphosphate reductase subunit beta [Achromobacter
           xylosoxidans A8]
 gi|310758546|gb|ADP13995.1| ribonucleoside-diphosphate reductase subunit beta [Achromobacter
           xylosoxidans A8]
          Length = 399

 Score =  231 bits (589), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 100/180 (55%), Positives = 132/180 (73%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           +RV V DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALWK+ NGL
Sbjct: 62  QRVKVADKRIINGQTDVNQLVPFKYKWAWEKYLATCANHWMPQEINMSRDIALWKNPNGL 121

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           T+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +QYI
Sbjct: 122 TEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYI 181

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + SL LDE E+FN Y EVPSI AK  + + +   ++ P+F          +L   + F C
Sbjct: 182 VESLDLDEAEIFNAYNEVPSIRAKDEFLIPFIDAIADPNFKTGTPEADQTLLKSLIVFAC 241


>gi|293603286|ref|ZP_06685715.1| ribonucleotide-diphosphate reductase subunit beta subunit
           [Achromobacter piechaudii ATCC 43553]
 gi|292818321|gb|EFF77373.1| ribonucleotide-diphosphate reductase subunit beta subunit
           [Achromobacter piechaudii ATCC 43553]
          Length = 398

 Score =  231 bits (588), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 100/180 (55%), Positives = 131/180 (72%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           +RV V DKR++N  +DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALWK+ NGL
Sbjct: 61  QRVKVADKRIINGETDVNQLVPFKYKWAWEKYLATCANHWMPQEINMSRDIALWKNPNGL 120

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           T+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +QYI
Sbjct: 121 TEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYI 180

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + SL LDE E+FN Y EVPSI AK  + + +   ++ P+F          +L   + F C
Sbjct: 181 VESLDLDEAEIFNAYNEVPSIRAKDQFLIPFIDAIADPNFKTGTPEADQTLLKSLIVFAC 240


>gi|73542624|ref|YP_297144.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
           eutropha JMP134]
 gi|72120037|gb|AAZ62300.1| Ribonucleoside-diphosphate reductase [Ralstonia eutropha JMP134]
          Length = 394

 Score =  231 bits (588), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 104/194 (53%), Positives = 135/194 (69%), Gaps = 1/194 (0%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           + NN   +  Q+  +RVN  DKR++N  +DVNQL+P KY WAWEKYL+ C NHWMP E+ 
Sbjct: 44  LGNNPNAAAAQSN-RRVNAADKRVINGSTDVNQLVPFKYKWAWEKYLAGCANHWMPQEIN 102

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+A WK  NGLT+DER +IKRNLGFF +++SL ANNIVL  YR ++ PECRQYLLRQ
Sbjct: 103 MSRDIATWKDPNGLTEDERRIIKRNLGFFVTADSLAANNIVLGTYRQITAPECRQYLLRQ 162

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYI+ SLGL+E E+FN Y EV SI  K  + + +  TL+ PSF      
Sbjct: 163 AFEEAIHTHAYQYIVESLGLNEAEIFNAYHEVQSIRDKDEFLIPFIDTLTDPSFKTGTPE 222

Query: 181 RRSRILTRSLRFLC 194
              ++L   + F C
Sbjct: 223 NDQKLLKSLIVFAC 236


>gi|149927167|ref|ZP_01915424.1| ribonucleotide-diphosphate reductase beta subunit [Limnobacter sp.
           MED105]
 gi|149824106|gb|EDM83327.1| ribonucleotide-diphosphate reductase beta subunit [Limnobacter sp.
           MED105]
          Length = 399

 Score =  230 bits (587), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 103/188 (54%), Positives = 131/188 (69%), Gaps = 2/188 (1%)

Query: 9   PIQAGEK--RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           P   G K  RVN  DKR++N  +DVNQL+P KY WAWEKYLS C NHWMP E+ M  D+A
Sbjct: 54  PAAEGAKAGRVNAADKRVINGTTDVNQLVPFKYKWAWEKYLSQCANHWMPQEINMDRDIA 113

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
           LWK  NGLT+DERL++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAF+EA+
Sbjct: 114 LWKDPNGLTEDERLIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFDEAI 173

Query: 127 HSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRIL 186
           H+H +QYI+ SLG+ E E FN Y E+  I AK ++ L +   L+ PSF          +L
Sbjct: 174 HTHAYQYIVESLGIPEAETFNAYNEISCIKAKDDFLLPFIDVLTDPSFKTGTLEADQTLL 233

Query: 187 TRSLRFLC 194
              + F C
Sbjct: 234 KSLIAFAC 241


>gi|330430727|gb|AEC22061.1| ribonucleoside-diphosphate reductase beta chain [Pusillimonas sp.
           T7-7]
          Length = 387

 Score =  230 bits (587), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 102/198 (51%), Positives = 135/198 (68%), Gaps = 7/198 (3%)

Query: 4   NTGLSPIQA-------GEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMP 56
           N  ++P  A       G  RV   DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP
Sbjct: 32  NDAMAPTPAAAGSTADGSGRVRAADKRIINGKTDVNQLVPFKYKWAWEKYLATCANHWMP 91

Query: 57  TEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQY 116
            E+ M  D++LWK+ NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+
Sbjct: 92  QEINMSRDISLWKNPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQF 151

Query: 117 LLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHY 176
           LLRQAFEEA+H+H +QYI+ SL LDE E+FN Y EVPSI AK  + + +   ++ P F  
Sbjct: 152 LLRQAFEEAIHTHAYQYIVESLDLDEAEIFNAYNEVPSIRAKDEFLIPFIDAIADPHFQT 211

Query: 177 WNKRRRSRILTRSLRFLC 194
                   +L   + F C
Sbjct: 212 GTPEADQTLLKSLIVFAC 229


>gi|253997287|ref|YP_003049351.1| Ribonucleoside-diphosphate reductase [Methylotenera mobilis JLW8]
 gi|253983966|gb|ACT48824.1| Ribonucleoside-diphosphate reductase [Methylotenera mobilis JLW8]
          Length = 377

 Score =  230 bits (587), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 102/191 (53%), Positives = 134/191 (70%), Gaps = 4/191 (2%)

Query: 8   SPIQAGEK----RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
           +P+ A +     RVN  DKRM+N ++DVNQL+P KY WAW+KYL+ C NHWMP EV M  
Sbjct: 29  TPVAANQPSISGRVNASDKRMINGQTDVNQLVPFKYHWAWDKYLAGCANHWMPQEVSMSR 88

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+A WK    LTDDERL++KRNLGFF +++SL ANNIVL  YRH++ PE RQYLLRQ FE
Sbjct: 89  DIAQWKDSTALTDDERLIVKRNLGFFTTADSLAANNIVLGTYRHITAPEARQYLLRQGFE 148

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QYI+ SLGLDE E+FN Y+EV SI  K ++ + +  TL++P F         
Sbjct: 149 EAIHTHAYQYIVESLGLDESEVFNAYQEVASIKDKDDFLIPFINTLTNPEFKTGTAEADQ 208

Query: 184 RILTRSLRFLC 194
           ++L   + F C
Sbjct: 209 QLLRSLIVFAC 219


>gi|187930114|ref|YP_001900601.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
           pickettii 12J]
 gi|187727004|gb|ACD28169.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12J]
          Length = 402

 Score =  230 bits (587), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 104/194 (53%), Positives = 135/194 (69%), Gaps = 1/194 (0%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           + NN   +  Q+  +RVN  DKR++N  +DVNQL+P KY WAWEKYL+ C NHWMP E+ 
Sbjct: 52  LGNNPNAAAAQSN-RRVNAADKRVINGATDVNQLVPFKYKWAWEKYLAGCANHWMPQEIN 110

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+A WK  NGLT+DER +IKRNLGFF +++SL ANNIVL  YR ++ PECRQYLLRQ
Sbjct: 111 MSRDIATWKDPNGLTEDERRIIKRNLGFFVTADSLAANNIVLGTYRQITAPECRQYLLRQ 170

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYI+ SLGL+E E+FN Y EV SI  K  + + +  TL+ PSF      
Sbjct: 171 AFEEAIHTHAYQYIVESLGLNEAEIFNAYHEVQSIRDKDEFLIPFIDTLTDPSFKTGTPE 230

Query: 181 RRSRILTRSLRFLC 194
              ++L   + F C
Sbjct: 231 NDQKLLKSLIVFAC 244


>gi|264680215|ref|YP_003280125.1| ribonucleotide reductase [Comamonas testosteroni CNB-2]
 gi|262210731|gb|ACY34829.1| ribonucleotide reductase [Comamonas testosteroni CNB-2]
          Length = 336

 Score =  229 bits (585), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 100/178 (56%), Positives = 130/178 (73%)

Query: 17  VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           +N  DKR++NA++DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+ALWK  NGLT+
Sbjct: 1   MNAADKRIINAKTDVNQLVPFKYKWAWEKYLATCANHWMPQEVNMTRDIALWKDPNGLTE 60

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
           DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +QYI+ 
Sbjct: 61  DERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYIVE 120

Query: 137 SLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           SLGLDE E+FN Y EV SI  K  + + + + +  P+FH         +L   + F C
Sbjct: 121 SLGLDESEIFNAYNEVQSIRDKDEFLIPFIEAIMDPNFHTGTPETDQTLLKSLIVFAC 178


>gi|171057074|ref|YP_001789423.1| ribonucleotide-diphosphate reductase subunit beta [Leptothrix
           cholodnii SP-6]
 gi|170774519|gb|ACB32658.1| Ribonucleoside-diphosphate reductase [Leptothrix cholodnii SP-6]
          Length = 402

 Score =  229 bits (585), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 102/180 (56%), Positives = 127/180 (70%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           +RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+A WK  NGL
Sbjct: 65  RRVNVADKRIINGQTDVNQLVPFKYKWAWEKYLATCANHWMPQEVNMSRDIATWKDPNGL 124

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           TDDER +IKRNLGFF +++SL ANNI L  YRH++ PECRQ+LLRQAFEEA+H+H +QYI
Sbjct: 125 TDDERRLIKRNLGFFVTADSLAANNITLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYI 184

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + SLGLDE E+FN Y EV SI  K  + + Y   +  P F          +L   + F C
Sbjct: 185 VESLGLDESEIFNAYHEVASIREKDEFLIPYIDAIMDPHFKTGTPENDQTLLKSLIVFAC 244


>gi|326315613|ref|YP_004233285.1| ribonucleoside-diphosphate reductase [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323372449|gb|ADX44718.1| Ribonucleoside-diphosphate reductase [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 387

 Score =  229 bits (584), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 101/183 (55%), Positives = 130/183 (71%)

Query: 12  AGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSK 71
           A  +RVN  DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+ALWK  
Sbjct: 47  AQHRRVNAADKRIINGQTDVNQLVPFKYKWAWEKYLATCANHWMPQEVNMTRDIALWKDP 106

Query: 72  NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
           NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +
Sbjct: 107 NGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAY 166

Query: 132 QYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           QYI+ SLGLDE E+FN Y EV SI  K  + + + + +  P F          +L   + 
Sbjct: 167 QYIVESLGLDESEIFNAYNEVDSIRNKDEFLIPFIEAIMDPDFKTGTPETDQTLLKSLIV 226

Query: 192 FLC 194
           F C
Sbjct: 227 FAC 229


>gi|329902475|ref|ZP_08273120.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327548767|gb|EGF33404.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 416

 Score =  229 bits (584), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 101/180 (56%), Positives = 129/180 (71%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           +R+N  DKR++N  +DVNQL+P KY WAW+KYL+ C NHWMP E+ MQ D+ LWKS NGL
Sbjct: 79  RRMNAADKRIINGNTDVNQLVPFKYKWAWDKYLAGCANHWMPQEINMQRDIELWKSPNGL 138

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           TDDER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQYLLRQAFEEA+H+H +QYI
Sbjct: 139 TDDERRLVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYI 198

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             SLGLDE E+FN Y EV SI  K  + + +   L+ P F         ++L   + F C
Sbjct: 199 TESLGLDEAEIFNAYHEVKSIRDKDEFLIPFIDALTDPLFTTGTTINDQKLLKSLIVFSC 258


>gi|319791701|ref|YP_004153341.1| ribonucleoside-diphosphate reductase [Variovorax paradoxus EPS]
 gi|315594164|gb|ADU35230.1| Ribonucleoside-diphosphate reductase [Variovorax paradoxus EPS]
          Length = 411

 Score =  229 bits (583), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 101/180 (56%), Positives = 128/180 (71%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           +RV   DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+ALWK  NGL
Sbjct: 74  QRVKASDKRIINGQTDVNQLVPFKYKWAWEKYLATCANHWMPQEVNMTRDIALWKDPNGL 133

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           T+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +QYI
Sbjct: 134 TEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYI 193

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + SLGLDE E+FN Y EV SI  K  + L +   +S P F          +L   + F C
Sbjct: 194 VESLGLDESEIFNAYNEVQSIREKDQFLLPFIDAISDPHFKTGTHETDQTLLKSLIVFAC 253


>gi|121595925|ref|YP_987821.1| ribonucleotide-diphosphate reductase subunit beta [Acidovorax sp.
           JS42]
 gi|222112113|ref|YP_002554377.1| ribonucleotide-diphosphate reductase subunit beta [Acidovorax
           ebreus TPSY]
 gi|120608005|gb|ABM43745.1| Ribonucleoside-diphosphate reductase [Acidovorax sp. JS42]
 gi|221731557|gb|ACM34377.1| Ribonucleoside-diphosphate reductase [Acidovorax ebreus TPSY]
          Length = 396

 Score =  228 bits (582), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 100/180 (55%), Positives = 130/180 (72%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           +RV+  DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+ALWK  NGL
Sbjct: 59  RRVSAVDKRIINGQTDVNQLVPFKYKWAWEKYLATCANHWMPQEVNMTRDIALWKDPNGL 118

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           T+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +QYI
Sbjct: 119 TEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYI 178

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + SLGLDEGE+FN Y EV SI  K  + + + + +  P F          +L   + F C
Sbjct: 179 VESLGLDEGEIFNAYNEVQSIRDKDEFLIPFIEAIMDPRFTTGTPESDQTLLKSLIVFAC 238


>gi|120609557|ref|YP_969235.1| ribonucleotide-diphosphate reductase subunit beta [Acidovorax
           citrulli AAC00-1]
 gi|120588021|gb|ABM31461.1| Ribonucleoside-diphosphate reductase [Acidovorax citrulli AAC00-1]
          Length = 387

 Score =  228 bits (581), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 100/180 (55%), Positives = 129/180 (71%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           +RVN  DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+ALWK  NGL
Sbjct: 50  RRVNAADKRIINGQTDVNQLVPFKYKWAWEKYLATCANHWMPQEVNMTRDIALWKDPNGL 109

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           T+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +QYI
Sbjct: 110 TEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYI 169

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + SLGLDE E+FN Y EV SI  K  + + + + +  P F          +L   + F C
Sbjct: 170 VESLGLDESEIFNAYNEVDSIRHKDEFLIPFIEAIMDPDFKTGTPETDQTLLKSLIVFAC 229


>gi|91787004|ref|YP_547956.1| ribonucleotide-diphosphate reductase subunit beta [Polaromonas sp.
           JS666]
 gi|91696229|gb|ABE43058.1| Ribonucleoside-diphosphate reductase [Polaromonas sp. JS666]
          Length = 406

 Score =  228 bits (580), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 100/179 (55%), Positives = 127/179 (70%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           RV   DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+ALWK  NGLT
Sbjct: 70  RVKASDKRIINGQTDVNQLVPFKYKWAWEKYLATCANHWMPQEVNMTRDIALWKDPNGLT 129

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           +DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +QYI 
Sbjct: 130 EDERRLVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYIT 189

Query: 136 TSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            SLGLDE E+FN Y EV SI  K  + + + + +S P F          +L   + F C
Sbjct: 190 ESLGLDEAEIFNAYNEVQSIKDKDQFLIPFIEVISDPHFKTGTTEADQTLLKSLIVFAC 248


>gi|332039867|gb|EGI76262.1| ribonucleotide-diphosphate reductase subunit beta [Hylemonella
           gracilis ATCC 19624]
          Length = 399

 Score =  228 bits (580), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 100/183 (54%), Positives = 130/183 (71%)

Query: 12  AGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSK 71
           +G  R+   DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+ALWK  
Sbjct: 59  SGTHRIKASDKRIINGQTDVNQLVPFKYKWAWEKYLATCANHWMPQEVNMNRDIALWKDP 118

Query: 72  NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
           NGL++DER +IKRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +
Sbjct: 119 NGLSEDERRIIKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAY 178

Query: 132 QYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           QYI+ SLGLDE E+F+ Y EV SI  K  + L +   +  P+FH         +L   + 
Sbjct: 179 QYIVESLGLDESEIFSAYLEVQSIRDKDEFLLPFINAIMDPNFHTGTLETDQTLLKSLIV 238

Query: 192 FLC 194
           F C
Sbjct: 239 FAC 241


>gi|313200886|ref|YP_004039544.1| ribonucleoside-diphosphate reductase [Methylovorus sp. MP688]
 gi|312440202|gb|ADQ84308.1| Ribonucleoside-diphosphate reductase [Methylovorus sp. MP688]
          Length = 381

 Score =  227 bits (579), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 98/179 (54%), Positives = 131/179 (73%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           RV   DKR++N ++DVNQL+P KY WAW+KYL+ C NHWMP E+ M  D+A WK  + LT
Sbjct: 45  RVQAVDKRVINGQTDVNQLVPFKYHWAWDKYLAGCANHWMPQEISMSRDIAQWKDSSALT 104

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           +DERL++KRNLGFF +++SL ANNIVL  YRH++ PECRQYLLRQAFEEA+H+H +QYI+
Sbjct: 105 EDERLIVKRNLGFFTTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIV 164

Query: 136 TSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            SLGLDE E+FN Y+EV SI  K ++ + +  TL+ P F     +   ++L   + F C
Sbjct: 165 ESLGLDESEIFNAYQEVSSIRDKDDFLIPFINTLTDPEFKTGTTQADQQLLRSLIVFAC 223


>gi|253998799|ref|YP_003050862.1| Ribonucleoside-diphosphate reductase [Methylovorus sp. SIP3-4]
 gi|253985478|gb|ACT50335.1| Ribonucleoside-diphosphate reductase [Methylovorus sp. SIP3-4]
          Length = 383

 Score =  227 bits (578), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 98/179 (54%), Positives = 131/179 (73%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           RV   DKR++N ++DVNQL+P KY WAW+KYL+ C NHWMP E+ M  D+A WK  + LT
Sbjct: 47  RVQAVDKRVINGQTDVNQLVPFKYHWAWDKYLAGCANHWMPQEISMSRDIAQWKDSSALT 106

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           +DERL++KRNLGFF +++SL ANNIVL  YRH++ PECRQYLLRQAFEEA+H+H +QYI+
Sbjct: 107 EDERLIVKRNLGFFTTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIV 166

Query: 136 TSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            SLGLDE E+FN Y+EV SI  K ++ + +  TL+ P F     +   ++L   + F C
Sbjct: 167 ESLGLDESEIFNAYQEVSSIRDKDDFLIPFINTLTDPEFKTGTTQADQQLLRSLIVFAC 225


>gi|74317993|ref|YP_315733.1| ribonucleotide-diphosphate reductase subunit beta [Thiobacillus
           denitrificans ATCC 25259]
 gi|74057488|gb|AAZ97928.1| ribonucleoside-diphosphate reductase beta chain [Thiobacillus
           denitrificans ATCC 25259]
          Length = 376

 Score =  225 bits (574), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 98/179 (54%), Positives = 127/179 (70%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           RV   DKR++N  +DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+A WK    LT
Sbjct: 40  RVRASDKRVINGATDVNQLVPFKYKWAWEKYLAGCANHWMPQEVNMSRDIAQWKDPTALT 99

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           +DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQYLLRQAFEEA+H+H +QYI+
Sbjct: 100 EDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIV 159

Query: 136 TSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            SLGLDE E+FN Y E+ SI  K ++ + +  TL++P F         ++L   + F C
Sbjct: 160 ESLGLDEAEIFNAYHEIESIRDKDDFLIPFIDTLTNPEFKTGTPENDQKLLKSLIVFAC 218


>gi|87311395|ref|ZP_01093515.1| ribonucleotide-diphosphate reductase beta subunit [Blastopirellula
           marina DSM 3645]
 gi|87285807|gb|EAQ77721.1| ribonucleotide-diphosphate reductase beta subunit [Blastopirellula
           marina DSM 3645]
          Length = 313

 Score =  225 bits (573), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 101/161 (62%), Positives = 131/161 (81%), Gaps = 2/161 (1%)

Query: 15  KRVNVDDKRMLN-ARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           +RV  +DKR++N ++ DVNQL+PLKY WAWE Y++ C NHWMPTEVPM  D+  W+S + 
Sbjct: 16  QRVRANDKRLVNCSQVDVNQLMPLKYNWAWEHYMNGCANHWMPTEVPMTKDIETWRS-DK 74

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           LTDDERL+I RNLGFF+++ESLV NN+VLAI++H++N ECRQYLLRQAFEEAVHSHTF Y
Sbjct: 75  LTDDERLVIMRNLGFFSTAESLVGNNLVLAIFKHVTNAECRQYLLRQAFEEAVHSHTFLY 134

Query: 134 IITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           ++ SLGL+EGE+FNMY EVP+I  K  + ++ T  + SP F
Sbjct: 135 VVESLGLNEGEIFNMYNEVPAIARKDQFEMKLTAEVLSPDF 175


>gi|269839640|ref|YP_003324332.1| ribonucleoside-diphosphate reductase [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269791370|gb|ACZ43510.1| Ribonucleoside-diphosphate reductase [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 353

 Score =  222 bits (565), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 101/161 (62%), Positives = 126/161 (78%), Gaps = 2/161 (1%)

Query: 15  KRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           +R+ V+DKR++N ++ DVNQL PLKY WAWE YL+ C NHWMPTEVPM  D+ LW+S N 
Sbjct: 17  QRIRVEDKRLINCKAVDVNQLWPLKYAWAWEHYLNGCANHWMPTEVPMHKDIELWRS-NA 75

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           LT DERL+I RNLGFF++ ESLV NNIVLAI++H++NPE RQYLLRQAFEEA+H+H F Y
Sbjct: 76  LTPDERLVIMRNLGFFSTGESLVGNNIVLAIFKHITNPEARQYLLRQAFEEAIHTHAFHY 135

Query: 134 IITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           I+ SLGLD  E+FNMYREV SI  K  + +  T+ +  P F
Sbjct: 136 IVESLGLDGREVFNMYREVDSIKGKDEFVMSLTERVLDPDF 176


>gi|325110864|ref|YP_004271932.1| ribonucleotide reductase [Planctomyces brasiliensis DSM 5305]
 gi|324971132|gb|ADY61910.1| ribonucleotide reductase [Planctomyces brasiliensis DSM 5305]
          Length = 353

 Score =  219 bits (559), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 100/166 (60%), Positives = 129/166 (77%), Gaps = 2/166 (1%)

Query: 10  IQAGEKRVNVDDKRMLN-ARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           + A   R    +KR++N A+ DVNQL+P+KY WAWE YL+ C NHWMPTEVPM  D+ +W
Sbjct: 12  LDAPTGRFKASEKRLINCAQVDVNQLMPIKYAWAWEHYLNGCANHWMPTEVPMTKDIEVW 71

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           KS N L+DDERL+I RNLGFF+++ESLV NN+VLAI++H++N ECRQYLLRQAFEEAVH+
Sbjct: 72  KS-NKLSDDERLVIMRNLGFFSTAESLVGNNLVLAIFKHVTNAECRQYLLRQAFEEAVHT 130

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           HTF Y++ SLGL EGE+FNMY EVP+I  K  + ++ T  + S  F
Sbjct: 131 HTFLYVVDSLGLHEGEVFNMYHEVPAIARKDEFEMKLTAEVLSEDF 176


>gi|159899093|ref|YP_001545340.1| ribonucleotide-diphosphate reductase subunit beta [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159892132|gb|ABX05212.1| Ribonucleoside-diphosphate reductase [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 342

 Score =  217 bits (553), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 97/160 (60%), Positives = 125/160 (78%), Gaps = 2/160 (1%)

Query: 16  RVNVDDKRMLNA-RSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           R N  DKR++N  + DVNQL+PL+YGWAWE YL+ C NHWMP EV M  D+A+W+S + L
Sbjct: 7   RFNASDKRLINCNQVDVNQLMPLRYGWAWEHYLNGCANHWMPNEVSMTGDIAIWRSTS-L 65

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           + DERLM+ RNLGFFA++ESLV NNIVLAI+RH++N ECRQYLLRQAFEEA+H+H F +I
Sbjct: 66  SADERLMVLRNLGFFATAESLVGNNIVLAIFRHITNAECRQYLLRQAFEEAIHTHAFLHI 125

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           + SLGL+E E+FNMY E+P I+ K  + +Q T  +  P F
Sbjct: 126 VESLGLNEREIFNMYHEIPVISQKDQFEMQLTAAVLDPQF 165


>gi|224825450|ref|ZP_03698555.1| Ribonucleoside-diphosphate reductase [Lutiella nitroferrum 2002]
 gi|224602371|gb|EEG08549.1| Ribonucleoside-diphosphate reductase [Lutiella nitroferrum 2002]
          Length = 360

 Score =  217 bits (553), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 96/182 (52%), Positives = 128/182 (70%), Gaps = 1/182 (0%)

Query: 13  GEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
           G  RVN  DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP EV MQ D+  WK+  
Sbjct: 22  GTGRVNASDKRVINGQTDVNQLVPFKYKWAWEKYLAQCANHWMPQEVNMQRDIEQWKTGQ 81

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
            L++DE  ++KRNLGFF +++SL ANNIVL  YR ++ PECRQ+LLRQAF+EA+H+H +Q
Sbjct: 82  -LSEDEMRLVKRNLGFFVTADSLAANNIVLGTYRQITAPECRQFLLRQAFDEAIHTHAYQ 140

Query: 133 YIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           YI+ SLGLDEGE+FN Y E+ SI  K  + + +  TL +P F         ++L   + F
Sbjct: 141 YIVESLGLDEGEVFNAYHEIKSIRDKDEFLIPFIDTLCNPEFKTGTTETDQQLLKSLIVF 200

Query: 193 LC 194
            C
Sbjct: 201 AC 202


>gi|283779060|ref|YP_003369815.1| ribonucleoside-diphosphate reductase [Pirellula staleyi DSM 6068]
 gi|283437513|gb|ADB15955.1| Ribonucleoside-diphosphate reductase [Pirellula staleyi DSM 6068]
          Length = 357

 Score =  216 bits (550), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 96/156 (61%), Positives = 127/156 (81%), Gaps = 2/156 (1%)

Query: 20  DDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
           ++KR++N  + DVNQL+P+KY WAWE Y + C NHWMP+EVPM  D+  W++ + LTDDE
Sbjct: 26  EEKRLINCSTVDVNQLMPIKYHWAWEHYQNGCANHWMPSEVPMGKDIETWRTGS-LTDDE 84

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           +L+I RNLGFF+++ESLV NN+VLAI+RH++NPECRQYLLRQAFEEA+H+HTF YI+ SL
Sbjct: 85  KLVILRNLGFFSTAESLVGNNLVLAIFRHVTNPECRQYLLRQAFEEAIHTHTFLYIVESL 144

Query: 139 GLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           GLD+ E+FNMYRE+PSI  K  + +Q T  L  P+F
Sbjct: 145 GLDDREVFNMYREIPSIARKDAFEMQLTTGLLDPNF 180


>gi|34497739|ref|NP_901954.1| ribonucleotide-diphosphate reductase subunit beta [Chromobacterium
           violaceum ATCC 12472]
 gi|34103595|gb|AAQ59956.1| ribonucleoside-diphosphate reductase system [Chromobacterium
           violaceum ATCC 12472]
          Length = 360

 Score =  214 bits (546), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 96/182 (52%), Positives = 128/182 (70%), Gaps = 1/182 (0%)

Query: 13  GEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
           G  RVNV DK+++N  +DVNQL+P K+ WAWEKYL+ C NHWMP EV MQ D+  WK+  
Sbjct: 22  GTGRVNVVDKKVINGTTDVNQLVPFKHKWAWEKYLAQCANHWMPQEVNMQRDIEQWKTGQ 81

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
            LT+DE  ++KRNLGFF +++SL ANNIVL  YR +++PECRQ+LLRQAF+EA+H+H +Q
Sbjct: 82  -LTEDEMRIVKRNLGFFVTADSLAANNIVLGTYRQITSPECRQFLLRQAFDEAIHTHAYQ 140

Query: 133 YIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           YI+ SLGLDEGE+FN Y EV SI  K  + + +   L +P F         ++L   + F
Sbjct: 141 YIVESLGLDEGEVFNAYHEVKSIRDKDEFLIPFIDVLCNPEFKTGTVENDQKLLKSLIVF 200

Query: 193 LC 194
            C
Sbjct: 201 AC 202


>gi|297621807|ref|YP_003709944.1| ribonucleoside-diphosphate reductase beta subunit [Waddlia
           chondrophila WSU 86-1044]
 gi|297377108|gb|ADI38938.1| ribonucleoside-diphosphate reductase beta subunit [Waddlia
           chondrophila WSU 86-1044]
          Length = 344

 Score =  214 bits (546), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 97/155 (62%), Positives = 126/155 (81%), Gaps = 2/155 (1%)

Query: 16  RVNVDDKRMLN-ARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           R   D K+++N +  DVNQLLPLKY WAWE YL+ C NHWMP+EVPM  D+  WKS + +
Sbjct: 11  RFRSDQKKLINCSEVDVNQLLPLKYKWAWEHYLNGCANHWMPSEVPMTKDIETWKS-DSI 69

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           ++DERL+IKRNLGFFA++ESLVANN+VLAI++H++N ECRQYLLRQAFEEA+HSH F YI
Sbjct: 70  SEDERLLIKRNLGFFATAESLVANNLVLAIFKHVTNAECRQYLLRQAFEEALHSHAFLYI 129

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           + SLGL+E E+FNMYRE+ +I+ K  + +Q T+ L
Sbjct: 130 VDSLGLEEQEIFNMYREISTISEKDEFEMQLTKGL 164


>gi|298243909|ref|ZP_06967716.1| Ribonucleoside-diphosphate reductase [Ktedonobacter racemifer DSM
           44963]
 gi|297556963|gb|EFH90827.1| Ribonucleoside-diphosphate reductase [Ktedonobacter racemifer DSM
           44963]
          Length = 361

 Score =  211 bits (537), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 97/154 (62%), Positives = 119/154 (77%), Gaps = 2/154 (1%)

Query: 22  KRMLNA-RSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           KR++N    DVNQL+PLKY WAWE YL+ C NHWMPTEVPM  D+  W+S N LT  ERL
Sbjct: 32  KRLINGWHVDVNQLMPLKYRWAWEHYLNGCANHWMPTEVPMTKDIETWRS-NKLTAGERL 90

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
           +I RNLGFFA++ESLV NN+VLAI++H++N ECRQYLLRQAFEEA+H+HTF YI+ SLGL
Sbjct: 91  VIMRNLGFFATAESLVGNNLVLAIFKHITNAECRQYLLRQAFEEAIHTHTFLYIVESLGL 150

Query: 141 DEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
            E E+FNMY E+PSI  K  + +Q T  +  P F
Sbjct: 151 SEHEVFNMYHEIPSIKEKDEFEMQLTSAVLDPDF 184


>gi|189219089|ref|YP_001939730.1| ribonucleotide-diphosphate reductase subunit beta
           [Methylacidiphilum infernorum V4]
 gi|189185947|gb|ACD83132.1| Ribonucleotide reductase, beta subunit [Methylacidiphilum
           infernorum V4]
          Length = 361

 Score =  210 bits (535), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 98/163 (60%), Positives = 130/163 (79%), Gaps = 2/163 (1%)

Query: 14  EKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
           +KR+NV++KR++N ++ DVNQL+PLKY WAWE YL+ C N+W+P+EVPMQ D+ LWKS N
Sbjct: 25  KKRINVEEKRLINCKAVDVNQLMPLKYKWAWEHYLNGCANNWLPSEVPMQRDVELWKS-N 83

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
            L++DERL+I RNLGFFA+ ESLV NNIVLAI++ ++N E RQYLLRQA+EEAVH+H F 
Sbjct: 84  RLSNDERLVIMRNLGFFATGESLVGNNIVLAIFKFVTNAEARQYLLRQAYEEAVHTHAFL 143

Query: 133 YIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFH 175
           YI+ SLGLDE E+FNMY EV SI+ K  + +  T+ +    F+
Sbjct: 144 YIVESLGLDEREVFNMYHEVNSISNKDQFEMTLTEDILREGFN 186


>gi|149173739|ref|ZP_01852368.1| ribonucleotide-diphosphate reductase beta subunit [Planctomyces
           maris DSM 8797]
 gi|148847269|gb|EDL61603.1| ribonucleotide-diphosphate reductase beta subunit [Planctomyces
           maris DSM 8797]
          Length = 359

 Score =  209 bits (531), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 100/172 (58%), Positives = 126/172 (73%), Gaps = 3/172 (1%)

Query: 5   TGLSPI-QAGEKRVNVDDKRMLN-ARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           T +SP+      R   D KR++N ++ DVNQL+PLKY WAWE YL+ C NHWMPTEV M 
Sbjct: 12  TPVSPVGDTPTGRFKADKKRLINCSQVDVNQLMPLKYHWAWEHYLNGCANHWMPTEVGMT 71

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D+  W+S   L++ ER +I RNLGFFA++ESLVANNIVLAI++H++N ECRQYLLRQAF
Sbjct: 72  KDIETWRSSK-LSEGERFVIMRNLGFFATAESLVANNIVLAIFKHVTNAECRQYLLRQAF 130

Query: 123 EEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           EEAVHSHTF YI+ SLGL+E E+FNMY EVP+I  K    ++ T  +    F
Sbjct: 131 EEAVHSHTFLYIVESLGLNESEVFNMYHEVPAIAKKDQLEMELTSEILDHDF 182


>gi|29840533|ref|NP_829639.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           caviae GPIC]
 gi|29834882|gb|AAP05517.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
           caviae GPIC]
          Length = 346

 Score =  206 bits (525), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 97/161 (60%), Positives = 127/161 (78%), Gaps = 2/161 (1%)

Query: 15  KRVNVDDKRMLNA-RSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           KRV ++ KR++N  + DVNQL+P+KY WAWE YL+ C N+W+PTEVPM  D+ LWKS N 
Sbjct: 11  KRVQLNSKRLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEVPMARDIELWKS-ND 69

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           L++DER +I  NLGFF+++ESLV NNIVLAI++H++NPE RQYLLRQAFEEAVH+HTF Y
Sbjct: 70  LSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHITNPEARQYLLRQAFEEAVHTHTFLY 129

Query: 134 IITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           I  SLGLDEGE+FN Y E  +I AK ++ +  T  + +P+F
Sbjct: 130 ICESLGLDEGEVFNAYNERATIKAKDDFQMTLTVDVLNPNF 170


>gi|89898045|ref|YP_515155.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           felis Fe/C-56]
 gi|89331417|dbj|BAE81010.1| ribonucleoside-diphosphate reductase beta chain [Chlamydophila
           felis Fe/C-56]
          Length = 349

 Score =  205 bits (521), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 96/166 (57%), Positives = 128/166 (77%), Gaps = 2/166 (1%)

Query: 10  IQAGEKRVNVDDKRMLNA-RSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           ++   KRV ++ KR++N  + DVNQL+P+KY WAWE YL+ C N+W+PTEVPM  D+ LW
Sbjct: 9   LEGKSKRVQLNSKRLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEVPMARDIDLW 68

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           KS N L++DER +I  NLGFF+++ESLV NNIVLAI++H++NPE RQYLLRQAFEEAVH+
Sbjct: 69  KS-NELSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHITNPEVRQYLLRQAFEEAVHT 127

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           HTF YI  SLGLDE E+FN Y E  +I AK ++ +  T+ +  P+F
Sbjct: 128 HTFLYICESLGLDESEVFNAYNERATIKAKDDFQMDLTRDVLDPNF 173


>gi|15605563|ref|NP_220349.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis D/UW-3/CX]
 gi|255311668|ref|ZP_05354238.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis 6276]
 gi|255317969|ref|ZP_05359215.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis 6276s]
 gi|14195107|sp|O84835|RIR2_CHLTR RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|51247460|pdb|1SYY|A Chain A, Crystal Structure Of The R2 Subunit Of Ribonucleotide
           Reductase From Chlamydia Trachomatis
 gi|3329298|gb|AAC68425.1| Ribonucleoside Reductase, Small Chain [Chlamydia trachomatis
           D/UW-3/CX]
 gi|296436383|gb|ADH18557.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis G/9768]
 gi|296437314|gb|ADH19484.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis G/11222]
 gi|296438242|gb|ADH20403.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis G/11074]
 gi|297140743|gb|ADH97501.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis G/9301]
 gi|297748957|gb|ADI51503.1| Ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis D-EC]
 gi|297749837|gb|ADI52515.1| Ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis D-LC]
          Length = 346

 Score =  205 bits (521), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 95/166 (57%), Positives = 129/166 (77%), Gaps = 2/166 (1%)

Query: 10  IQAGEKRVNVDDKRMLNA-RSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           +   +KRVN++ KR++N  + DVNQL+P+KY WAWE YL+ C N+W+PTE+PM  D+ LW
Sbjct: 6   LDGKQKRVNLNSKRLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEIPMGKDIELW 65

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           KS + L++DER +I  NLGFF+++ESLV NNIVLAI++H++NPE RQYLLRQAFEEAVH+
Sbjct: 66  KS-DRLSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHT 124

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           HTF YI  SLGLDE E+FN Y E  +I AK ++ ++ T  +  P+F
Sbjct: 125 HTFLYICESLGLDEKEIFNAYNERAAIKAKDDFQMEITGKVLDPNF 170


>gi|76789573|ref|YP_328659.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis A/HAR-13]
 gi|237803260|ref|YP_002888454.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis B/Jali20/OT]
 gi|237805181|ref|YP_002889335.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis B/TZ1A828/OT]
 gi|255349232|ref|ZP_05381239.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis 70]
 gi|255503769|ref|ZP_05382159.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis 70s]
 gi|255507450|ref|ZP_05383089.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis D(s)2923]
 gi|76168103|gb|AAX51111.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis A/HAR-13]
 gi|231273481|emb|CAX10397.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis B/TZ1A828/OT]
 gi|231274494|emb|CAX11290.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis B/Jali20/OT]
 gi|289525874|emb|CBJ15356.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis Sweden2]
 gi|296435459|gb|ADH17637.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis E/150]
 gi|296439176|gb|ADH21329.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis E/11023]
          Length = 346

 Score =  204 bits (520), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 95/166 (57%), Positives = 129/166 (77%), Gaps = 2/166 (1%)

Query: 10  IQAGEKRVNVDDKRMLNA-RSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           +   +KRVN++ KR++N  + DVNQL+P+KY WAWE YL+ C N+W+PTE+PM  D+ LW
Sbjct: 6   LDGKQKRVNLNSKRLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEIPMGKDIELW 65

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           KS + L++DER +I  NLGFF+++ESLV NNIVLAI++H++NPE RQYLLRQAFEEAVH+
Sbjct: 66  KS-DRLSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHT 124

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           HTF YI  SLGLDE E+FN Y E  +I AK ++ ++ T  +  P+F
Sbjct: 125 HTFLYICESLGLDEKEIFNAYNERAAIKAKDDFQMEITGKVLDPNF 170


>gi|166154172|ref|YP_001654290.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis 434/Bu]
 gi|166155047|ref|YP_001653302.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis L2b/UCH-1/proctitis]
 gi|301335416|ref|ZP_07223660.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis L2tet1]
 gi|165930160|emb|CAP03644.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis 434/Bu]
 gi|165931035|emb|CAP06598.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis L2b/UCH-1/proctitis]
          Length = 346

 Score =  204 bits (520), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 95/166 (57%), Positives = 129/166 (77%), Gaps = 2/166 (1%)

Query: 10  IQAGEKRVNVDDKRMLNA-RSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           +   +KRVN++ KR++N  + DVNQL+P+KY WAWE YL+ C N+W+PTE+PM  D+ LW
Sbjct: 6   LDGKQKRVNLNSKRLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEIPMGKDIELW 65

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           KS + L++DER +I  NLGFF+++ESLV NNIVLAI++H++NPE RQYLLRQAFEEAVH+
Sbjct: 66  KS-DRLSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHT 124

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           HTF YI  SLGLDE E+FN Y E  +I AK ++ ++ T  +  P+F
Sbjct: 125 HTFLYICESLGLDEKEIFNAYNERAAIKAKDDFQMEITGKVLDPNF 170


>gi|329943118|ref|ZP_08291892.1| ribonucleotide reductase, small chain family protein [Chlamydophila
           psittaci Cal10]
 gi|325507260|gb|ADZ18898.1| ribonucleotide reductase subunit beta [Chlamydophila psittaci 6BC]
 gi|328814665|gb|EGF84655.1| ribonucleotide reductase, small chain family protein [Chlamydophila
           psittaci Cal10]
 gi|328914953|gb|AEB55786.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
           psittaci 6BC]
          Length = 346

 Score =  204 bits (520), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 96/166 (57%), Positives = 127/166 (76%), Gaps = 2/166 (1%)

Query: 10  IQAGEKRVNVDDKRMLNA-RSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           ++   KRV ++ KR++N  + DVNQL+P+KY WAWE YL+ C N+W+PTEVPM  D+ LW
Sbjct: 6   LEGKSKRVQLNSKRLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEVPMARDIELW 65

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           KS N L++DER +I  NLGFF+++ESLV NNIVLAI++H++NPE RQYLLRQAFEEAVH+
Sbjct: 66  KSNN-LSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHITNPEARQYLLRQAFEEAVHT 124

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           HTF YI  SLGLDE E+FN Y E  +I AK ++ +  T  +  P+F
Sbjct: 125 HTFLYICESLGLDEAEVFNAYNERATIRAKDDFQMTLTGDVLDPNF 170


>gi|15834835|ref|NP_296594.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           muridarum Nigg]
 gi|270285001|ref|ZP_06194395.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           muridarum Nigg]
 gi|270289024|ref|ZP_06195326.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           muridarum Weiss]
 gi|301336399|ref|ZP_07224601.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           muridarum MopnTet14]
 gi|14195147|sp|Q9PL92|RIR2_CHLMU RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|7190253|gb|AAF39087.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydia
           muridarum Nigg]
          Length = 346

 Score =  204 bits (520), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 96/166 (57%), Positives = 128/166 (77%), Gaps = 2/166 (1%)

Query: 10  IQAGEKRVNVDDKRMLNA-RSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           +   +KRVN++ KR++N  + DVNQL+P+KY WAWE YL+ C N+W+PTE+ M  D+ LW
Sbjct: 6   LDGKQKRVNLNSKRLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEISMGKDIELW 65

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           KS N L++DER +I  NLGFF+++ESLV NNIVLAI++H++NPE RQYLLRQAFEEAVH+
Sbjct: 66  KS-NVLSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHT 124

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           HTF YI  SLGLDE E+FN Y E  SI AK ++ ++ T  +  P+F
Sbjct: 125 HTFLYICESLGLDEKEIFNAYNERASIKAKDDFQMEITGKVLDPNF 170


>gi|313848275|emb|CBY17276.1| putative ibonucleoside reductase small subunit [Chlamydophila
           psittaci RD1]
          Length = 349

 Score =  204 bits (520), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 96/166 (57%), Positives = 127/166 (76%), Gaps = 2/166 (1%)

Query: 10  IQAGEKRVNVDDKRMLNA-RSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           ++   KRV ++ KR++N  + DVNQL+P+KY WAWE YL+ C N+W+PTEVPM  D+ LW
Sbjct: 9   LEGKSKRVQLNSKRLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEVPMARDIELW 68

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           KS N L++DER +I  NLGFF+++ESLV NNIVLAI++H++NPE RQYLLRQAFEEAVH+
Sbjct: 69  KSNN-LSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHITNPEARQYLLRQAFEEAVHT 127

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           HTF YI  SLGLDE E+FN Y E  +I AK ++ +  T  +  P+F
Sbjct: 128 HTFLYICESLGLDEAEVFNAYNERATIRAKDDFQMTLTGDVLDPNF 173


>gi|282890382|ref|ZP_06298910.1| hypothetical protein pah_c016o114 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499764|gb|EFB42055.1| hypothetical protein pah_c016o114 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 350

 Score =  204 bits (519), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 97/162 (59%), Positives = 124/162 (76%), Gaps = 2/162 (1%)

Query: 14  EKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
           E       KR+LN +  DVNQL+PLKY WAWE YL+ C+N+WMP+EVPMQ D+ LWKS N
Sbjct: 14  EAEAAAQQKRILNCKQVDVNQLMPLKYHWAWEHYLNGCHNNWMPSEVPMQKDIELWKS-N 72

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
            L++DERL+I RNLGFF+++ESLV NNIVLAI++HL+N E RQYLLRQAFEEAVH+HTF 
Sbjct: 73  RLSNDERLVIMRNLGFFSTAESLVGNNIVLAIFKHLTNAEARQYLLRQAFEEAVHTHTFH 132

Query: 133 YIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           YI+ SL LD+ E+F+MY  V SI AK  + ++ T+ +    F
Sbjct: 133 YIVESLSLDQREVFDMYNAVNSIHAKDAFEMKLTEEVMQEGF 174


>gi|33242353|ref|NP_877294.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           pneumoniae TW-183]
 gi|33236864|gb|AAP98951.1| ribonucleoside reductase small chain [Chlamydophila pneumoniae
           TW-183]
          Length = 365

 Score =  203 bits (517), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 97/161 (60%), Positives = 124/161 (77%), Gaps = 2/161 (1%)

Query: 15  KRVNVDDKRMLNA-RSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           KRV V  K ++N  + DVNQL+P+KY WAWE YL+ C N+W+PTEVPM  D+ LWKS + 
Sbjct: 30  KRVEVSKKGLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEVPMARDIELWKS-DE 88

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           L++DER +I  NLGFF+++ESLV NNIVLAI++H++NPE RQYLLRQAFEEAVH+HTF Y
Sbjct: 89  LSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHITNPEARQYLLRQAFEEAVHTHTFLY 148

Query: 134 IITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           I  SLGLDEGE+FN Y E  SI AK ++ +  T  +  P+F
Sbjct: 149 ICESLGLDEGEVFNAYNERASIRAKDDFQMTLTVDVLDPNF 189


>gi|112489977|pdb|2ANI|A Chain A, Crystal Structure Of The F127y Mutant Of Ribonucleotide
           Reductase R2 From Chlamydia Trachomatis
          Length = 346

 Score =  203 bits (516), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 94/166 (56%), Positives = 129/166 (77%), Gaps = 2/166 (1%)

Query: 10  IQAGEKRVNVDDKRMLNA-RSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           +   +KRVN++ KR++N  + DVNQL+P+KY WAWE YL+ C N+W+PTE+PM  D+ LW
Sbjct: 6   LDGKQKRVNLNSKRLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEIPMGKDIELW 65

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           KS + L++DER +I  NLGFF+++ESLV NNIVLAI++H++NPE RQYLLRQAFEEAVH+
Sbjct: 66  KS-DRLSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHT 124

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           HT+ YI  SLGLDE E+FN Y E  +I AK ++ ++ T  +  P+F
Sbjct: 125 HTYLYICESLGLDEKEIFNAYNERAAIKAKDDFQMEITGKVLDPNF 170


>gi|15618893|ref|NP_225179.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           pneumoniae CWL029]
 gi|15836516|ref|NP_301040.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           pneumoniae J138]
 gi|16752043|ref|NP_445409.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           pneumoniae AR39]
 gi|14195165|sp|Q9Z6S4|RIR2_CHLPN RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|4377313|gb|AAD19122.1| Ribonucleoside Reductase, Small Chain [Chlamydophila pneumoniae
           CWL029]
 gi|7189783|gb|AAF38660.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
           pneumoniae AR39]
 gi|8979358|dbj|BAA99192.1| ribonucleoside reductase, small chain [Chlamydophila pneumoniae
           J138]
 gi|269302786|gb|ACZ32886.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
           pneumoniae LPCoLN]
          Length = 346

 Score =  202 bits (515), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 97/161 (60%), Positives = 124/161 (77%), Gaps = 2/161 (1%)

Query: 15  KRVNVDDKRMLNA-RSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           KRV V  K ++N  + DVNQL+P+KY WAWE YL+ C N+W+PTEVPM  D+ LWKS + 
Sbjct: 11  KRVEVSKKGLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEVPMARDIELWKS-DE 69

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           L++DER +I  NLGFF+++ESLV NNIVLAI++H++NPE RQYLLRQAFEEAVH+HTF Y
Sbjct: 70  LSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHITNPEARQYLLRQAFEEAVHTHTFLY 129

Query: 134 IITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           I  SLGLDEGE+FN Y E  SI AK ++ +  T  +  P+F
Sbjct: 130 ICESLGLDEGEVFNAYNERASIRAKDDFQMTLTVDVLDPNF 170


>gi|62185356|ref|YP_220141.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           abortus S26/3]
 gi|62148423|emb|CAH64191.1| putative ibonucleoside reductase small subunit [Chlamydophila
           abortus S26/3]
          Length = 349

 Score =  202 bits (515), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 95/166 (57%), Positives = 126/166 (75%), Gaps = 2/166 (1%)

Query: 10  IQAGEKRVNVDDKRMLNA-RSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           ++   KRV ++ KR++N  + DVNQL+P+KY WAWE Y++ C N W+PTEVPM  D+ LW
Sbjct: 9   LEGKSKRVQLNSKRLVNCNQVDVNQLVPIKYKWAWEHYVNGCANTWLPTEVPMARDIELW 68

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           KS N L++DER +I  NLGFF+++ESLV NNIVLAI++H++NPE RQYLLRQAFEEAVH+
Sbjct: 69  KSNN-LSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHITNPEARQYLLRQAFEEAVHT 127

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           HTF YI  SLGLDE E+FN Y E  +I AK ++ +  T  +  P+F
Sbjct: 128 HTFLYICESLGLDEAEVFNAYNERATIRAKDDFQMTLTGDVLDPNF 173


>gi|330443801|ref|YP_004376787.1| ribonucleoside-diphosphate reductase subunit beta [Chlamydophila
           pecorum E58]
 gi|328806911|gb|AEB41084.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
           pecorum E58]
          Length = 346

 Score =  201 bits (510), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 94/161 (58%), Positives = 126/161 (78%), Gaps = 2/161 (1%)

Query: 15  KRVNVDDKRMLN-ARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           KRV++++KR++N ++ DVNQL+P+KY WAWE YL+ C N+W+PTE+ M  D+ LWKS NG
Sbjct: 11  KRVHINNKRLVNCSQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEISMARDIELWKS-NG 69

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           L++DER +I  NLGFF+++ESLV NNIVLAI++H++NPE RQYLLRQAFEEAVH+ TF Y
Sbjct: 70  LSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHITNPEARQYLLRQAFEEAVHTQTFLY 129

Query: 134 IITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
           I  SL LDE E+FN Y E  SI AK ++ +  T  +  P+F
Sbjct: 130 ICESLSLDEAEVFNAYNERESIKAKDDFQMTLTVDVLDPNF 170


>gi|269302771|gb|ACZ32871.1| ribonucleoside-diphosphate reductase beta subunit, truncated
           [Chlamydophila pneumoniae LPCoLN]
          Length = 159

 Score =  193 bits (490), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 92/142 (64%), Positives = 114/142 (80%), Gaps = 2/142 (1%)

Query: 15  KRVNVDDKRMLNA-RSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           KRV V  K ++N  + DVNQL+P+KY WAWE YL+ C N+W+PTEVPM  D+ LWKS + 
Sbjct: 11  KRVEVSKKGLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEVPMARDIELWKS-DE 69

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           L++DER +I  NLGFF+++ESLV NNIVLAI++H++NPE RQYLLRQAFEEAVH+HTF Y
Sbjct: 70  LSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHITNPEARQYLLRQAFEEAVHTHTFLY 129

Query: 134 IITSLGLDEGELFNMYREVPSI 155
           I  SLGLDEGE+FN Y E  SI
Sbjct: 130 ICESLGLDEGEVFNAYNERASI 151


>gi|222834323|gb|EEE72800.1| predicted protein [Populus trichocarpa]
          Length = 146

 Score =  190 bits (482), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 81/118 (68%), Positives = 99/118 (83%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           KRVN  DKR++NA++DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+ALWK  NGL
Sbjct: 26  KRVNAADKRIINAKTDVNQLVPFKYKWAWEKYLATCANHWMPQEVNMNRDIALWKDPNGL 85

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
           T+DER +IKRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +Q
Sbjct: 86  TEDERRIIKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQ 143


>gi|167837963|ref|ZP_02464822.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           thailandensis MSMB43]
          Length = 303

 Score =  184 bits (467), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 80/145 (55%), Positives = 105/145 (72%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
           C NHWMP E+ M  D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++
Sbjct: 1   CANHWMPQEINMSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHIT 60

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
            PECRQ+LLRQAFEEA+H+H +QYI+ SLGLDEGE+FN Y EV +I AK  + + +  TL
Sbjct: 61  APECRQFLLRQAFEEAIHTHAYQYIVESLGLDEGEIFNAYHEVAAIRAKDEFLIPFIHTL 120

Query: 170 SSPSFHYWNKRRRSRILTRSLRFLC 194
           + P+F         ++L   + F C
Sbjct: 121 TDPAFTTGTLEADQKLLKSLIVFAC 145


>gi|257053403|ref|YP_003131236.1| ribonucleotide-diphosphate reductase subunit beta [Halorhabdus
           utahensis DSM 12940]
 gi|256692166|gb|ACV12503.1| Ribonucleoside-diphosphate reductase [Halorhabdus utahensis DSM
           12940]
          Length = 330

 Score =  164 bits (414), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 74/148 (50%), Positives = 103/148 (69%), Gaps = 1/148 (0%)

Query: 27  ARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNL 86
           A  D N++LP+ Y WA E Y +  NN+W+P E+PMQDD+A W     LTD ER +++ NL
Sbjct: 8   AEHDPNKILPIDYDWAREYYEAGVNNNWVPEEIPMQDDVAQWNGDE-LTDAERQLVEWNL 66

Query: 87  GFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELF 146
           GFF+++ESL ANN+VLA+Y +++ PECRQYLLRQA+EEA+H+ TF Y   SLG +   L+
Sbjct: 67  GFFSTAESLTANNLVLALYEYVTAPECRQYLLRQAYEEAIHTDTFIYCCDSLGFEPEYLY 126

Query: 147 NMYREVPSITAKANWALQYTQTLSSPSF 174
            MY  VPSI  K  + +  T+++  P F
Sbjct: 127 GMYDRVPSIEEKDQFVVDLTRSIDDPEF 154


>gi|322368525|ref|ZP_08043093.1| ribonucleotide-diphosphate reductase subunit beta [Haladaptatus
           paucihalophilus DX253]
 gi|320551809|gb|EFW93455.1| ribonucleotide-diphosphate reductase subunit beta [Haladaptatus
           paucihalophilus DX253]
          Length = 330

 Score =  164 bits (414), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 74/145 (51%), Positives = 102/145 (70%), Gaps = 1/145 (0%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           D N++LPL Y WA + Y +  NN+W+P E+PMQDD++ W   + L+D ER +I+ NLGFF
Sbjct: 11  DPNKILPLDYDWARDYYEAGVNNNWVPEEIPMQDDISQWNG-DALSDAERQLIEWNLGFF 69

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY 149
           +++ESL ANNIVLA+Y +++ PECRQYLLRQA+EEA+H+ TF Y   SLG D   L+ MY
Sbjct: 70  STAESLTANNIVLALYEYVTAPECRQYLLRQAYEEAIHTDTFIYCCDSLGFDPDYLYGMY 129

Query: 150 REVPSITAKANWALQYTQTLSSPSF 174
             VPSI  K  + +  T+ +  P F
Sbjct: 130 DRVPSIAEKDEFVVDLTRAIDRPDF 154


>gi|289582310|ref|YP_003480776.1| ribonucleoside-diphosphate reductase [Natrialba magadii ATCC 43099]
 gi|289531863|gb|ADD06214.1| Ribonucleoside-diphosphate reductase [Natrialba magadii ATCC 43099]
          Length = 330

 Score =  162 bits (409), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 71/149 (47%), Positives = 104/149 (69%), Gaps = 1/149 (0%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
           +A  D N++LP+ Y WA E Y +  NN+W+P E+PMQDD++ W   + L+D ER +++ N
Sbjct: 7   DAEHDPNKILPIDYDWAREYYEAGVNNNWVPEEIPMQDDVSQWNG-DALSDAERQLVEWN 65

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL 145
           LGFF+++ESL ANNIVLA+Y H++ PECRQYLLRQA+EEA+H+ TF Y   SLG +   +
Sbjct: 66  LGFFSTAESLTANNIVLAVYDHVTAPECRQYLLRQAYEEAIHTDTFIYCCDSLGFEPDYM 125

Query: 146 FNMYREVPSITAKANWALQYTQTLSSPSF 174
           + MY  +PSI  K  + +  T+ ++   F
Sbjct: 126 YGMYDRIPSIAEKDEFVIDLTRVINQNGF 154


>gi|300709535|ref|YP_003735349.1| ribonucleotide-diphosphate reductase subunit beta [Halalkalicoccus
           jeotgali B3]
 gi|299123218|gb|ADJ13557.1| ribonucleotide-diphosphate reductase subunit beta [Halalkalicoccus
           jeotgali B3]
          Length = 330

 Score =  160 bits (406), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 74/154 (48%), Positives = 104/154 (67%), Gaps = 3/154 (1%)

Query: 24  MLNARS--DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           ++N  S  D N++LP+ Y WA E Y +   N+W P EVPM DD+  W++   L+ +ER +
Sbjct: 3   LINTESHHDPNKILPIDYDWAREYYKAGVANNWTPEEVPMADDVHQWENDE-LSSEERQL 61

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           ++ NLGFF+++ESL ANNIVLA+Y H++ PECRQYLLRQA+EEA+H+ TF Y   SLG D
Sbjct: 62  VEWNLGFFSTAESLTANNIVLAVYDHVTAPECRQYLLRQAYEEAIHTDTFIYCCDSLGFD 121

Query: 142 EGELFNMYREVPSITAKANWALQYTQTLSSPSFH 175
              L+ MY  +P+I AK  + +  TQ +  P F 
Sbjct: 122 PEYLYGMYDRIPAIEAKDEFVVDLTQVIDDPDFE 155


>gi|313117005|ref|YP_004038129.1| ribonucleotide reductase, beta subunit [Halogeometricum borinquense
           DSM 11551]
 gi|312294957|gb|ADQ68993.1| ribonucleotide reductase, beta subunit [Halogeometricum borinquense
           DSM 11551]
          Length = 330

 Score =  158 bits (400), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 70/149 (46%), Positives = 101/149 (67%), Gaps = 1/149 (0%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
           +   D N++LP+ Y WA + Y     N+W+P E+PMQ+D+A W   + L+D E+ +++ N
Sbjct: 7   DTEHDPNKILPIDYDWARQYYRDGVANNWVPEEIPMQEDIAQWNG-DALSDSEKQLVEWN 65

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL 145
           LGFF+++ESL ANNIVLA+Y +++ PECRQYLLRQA+EEA+H+ TF Y   SLG D   +
Sbjct: 66  LGFFSTAESLTANNIVLALYEYVTAPECRQYLLRQAYEEAIHTDTFIYCCDSLGFDPEYM 125

Query: 146 FNMYREVPSITAKANWALQYTQTLSSPSF 174
           + MY  VPSI  K  + +  T+ L  P F
Sbjct: 126 YGMYDRVPSIKEKDEFVVDLTRNLDDPDF 154


>gi|15791173|ref|NP_280997.1| ribonucleotide-diphosphate reductase subunit beta [Halobacterium
           sp. NRC-1]
 gi|169236929|ref|YP_001690129.1| ribonucleotide-diphosphate reductase subunit beta [Halobacterium
           salinarum R1]
 gi|10581791|gb|AAG20477.1| ribonucleoside reductase small chain [Halobacterium sp. NRC-1]
 gi|167727995|emb|CAP14783.1| ribonucleoside-diphosphate reductase beta subunit [Halobacterium
           salinarum R1]
          Length = 331

 Score =  156 bits (395), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 73/149 (48%), Positives = 100/149 (67%), Gaps = 1/149 (0%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
           +A  D N++LP+ Y WA E Y     N+W P EV MQ D++ W+  N LTD ER +++ N
Sbjct: 7   DAEHDPNKILPIDYDWAREYYQQGVANNWTPEEVAMQGDISQWQG-NELTDAERQLVEWN 65

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL 145
           LGFF+++ESL ANNIVLAIY +++ PECRQYLLRQA+EEAVH+ TF Y   SLG D   +
Sbjct: 66  LGFFSTAESLTANNIVLAIYEYVTAPECRQYLLRQAYEEAVHTDTFIYCCDSLGFDPEHM 125

Query: 146 FNMYREVPSITAKANWALQYTQTLSSPSF 174
           + MY  +PSI  K  + +  T+ +   +F
Sbjct: 126 YGMYDRIPSIAEKDEFVVGLTRAVDDQAF 154


>gi|291336893|gb|ADD96422.1| hypothetical protein [uncultured organism MedDCM-OCT-S09-C426]
          Length = 172

 Score =  135 bits (340), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 63/144 (43%), Positives = 95/144 (65%), Gaps = 1/144 (0%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
           VNQ+LP K+   W+ +L +  N+W P E+ M  D+  WK  + L+DDE+L++KR LGFFA
Sbjct: 15  VNQILPHKHKSVWDNFLKSVANNWSPAEINMSTDIKQWKGDD-LSDDEKLLVKRCLGFFA 73

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
            SESLVANN++L + R +++ ECRQY+LRQA+EE++H+ T      S GL   E+F  Y+
Sbjct: 74  GSESLVANNLLLTVARWVTDAECRQYILRQAYEESLHNWTVVTCCDSFGLKVSEVFEAYQ 133

Query: 151 EVPSITAKANWALQYTQTLSSPSF 174
            + SI AK ++ +  T  ++   F
Sbjct: 134 NIESIKAKDDFLMGITTDVNRQGF 157


>gi|90023100|ref|YP_528927.1| amino acid adenylation [Saccharophagus degradans 2-40]
 gi|89952700|gb|ABD82715.1| Class Ia ribonucleoside-diphosphate reductase beta subunit
           [Saccharophagus degradans 2-40]
          Length = 368

 Score =  131 bits (329), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 63/157 (40%), Positives = 96/157 (61%), Gaps = 2/157 (1%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           G +     +  V   DKR++N  +D+NQL P KY WAW+ +++A  NHW P ++ M  D+
Sbjct: 28  GQAATPNAQAPVCASDKRVINGHTDINQLAPFKYPWAWDFFINANKNHWTPLDINMSQDV 87

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             +  K+ LT+ ER M +  L +  +S+ L   NI LA+   ++ PE + Y  RQ +EEA
Sbjct: 88  --YDYKHNLTEAERHMYENVLSYLTTSDILAMRNIGLAVMEKMTAPELQIYQARQVYEEA 145

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWA 162
           +H+ T+Q+ I +LGLD+GE++N YR VP I AK   A
Sbjct: 146 LHTWTYQHCIETLGLDQGEIYNRYRVVPEINAKIQMA 182


>gi|126664354|ref|ZP_01735338.1| Ribonucleotide reductase, beta subunit [Marinobacter sp. ELB17]
 gi|126630680|gb|EBA01294.1| Ribonucleotide reductase, beta subunit [Marinobacter sp. ELB17]
          Length = 352

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 66/162 (40%), Positives = 98/162 (60%), Gaps = 9/162 (5%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +A N+ ++P       VNVDDKR++N  +DVNQL P KY WAWE +++A  NHW P +V 
Sbjct: 14  IALNSSVAP-------VNVDDKRVINGNTDVNQLAPFKYPWAWEYFMNANKNHWTPLDVN 66

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+  +  +  L   E+ + +  L +  +S+ L   NI LA+   ++ PE + Y  RQ
Sbjct: 67  MSQDVHDYHHR--LNPAEKHVFENVLAYLTTSDILAMRNIGLAVMEKMTAPELQIYQARQ 124

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWA 162
            +EEAVH+ T+Q+ I +L LD+GE++N YR VP I  K   A
Sbjct: 125 VYEEAVHTWTYQHCIETLNLDQGEIYNRYRVVPQINGKIQMA 166


>gi|167947199|ref|ZP_02534273.1| Ribonucleotide reductase, beta subunit [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 241

 Score =  130 bits (326), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 65/148 (43%), Positives = 93/148 (62%), Gaps = 2/148 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K VN DDKR++N  +DVNQL P KY WAWE +L+A  NHW P ++ M  D+  +  K  L
Sbjct: 46  KPVNPDDKRVVNGLTDVNQLAPFKYPWAWEYFLNANKNHWTPLDINMAQDVHDYHHK--L 103

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           T +ER + +  L +  +S+ L   NI LA+   +S PE + Y  RQ +EEA+H+ T+Q+ 
Sbjct: 104 TLEERHIYENVLSYLTTSDILAMRNIGLAVMEKMSAPELQIYQARQVYEEALHTWTYQHC 163

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWA 162
           I ++GLD+ E++N YR VP I  K   A
Sbjct: 164 IETIGLDQVEIYNRYRVVPEINGKIQIA 191


>gi|120556760|ref|YP_961111.1| ribonucleoside-diphosphate reductase [Marinobacter aquaeolei VT8]
 gi|120326609|gb|ABM20924.1| Ribonucleoside-diphosphate reductase [Marinobacter aquaeolei VT8]
          Length = 352

 Score =  129 bits (324), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 63/151 (41%), Positives = 92/151 (60%), Gaps = 2/151 (1%)

Query: 12  AGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSK 71
            G   VNVDDKR++N  +D+NQL P KY WAWE +++A  NHW P +V M  D+  +  +
Sbjct: 18  GGPAPVNVDDKRVINGETDINQLAPFKYPWAWEYFMNANKNHWTPLDVNMAQDVHDYHHR 77

Query: 72  NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
             LT  E+ + +  L +  +S+ L   NI LA+   +S PE + Y  RQ +EEA+H+ T+
Sbjct: 78  --LTPAEKHVYENVLAYLTTSDILAMRNIGLAVMEKMSAPELQIYQARQVYEEALHTWTY 135

Query: 132 QYIITSLGLDEGELFNMYREVPSITAKANWA 162
           Q+ I +L LD+ E++N YR VP I  K   A
Sbjct: 136 QHCIETLNLDQSEIYNRYRVVPEINGKIQLA 166


>gi|238023979|ref|YP_002908211.1| Ribonucleotide reductase subunit beta [Burkholderia glumae BGR1]
 gi|237878644|gb|ACR30976.1| Ribonucleotide reductase, beta subunit [Burkholderia glumae BGR1]
          Length = 337

 Score =  129 bits (324), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 62/144 (43%), Positives = 91/144 (63%), Gaps = 2/144 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   V+DKR++N   D+NQL P +Y WAWE +LSA  NHW P E+ M DD+  +  +  L
Sbjct: 5   KPARVEDKRVVNGAGDINQLAPFRYAWAWECFLSANKNHWTPLEISMSDDVHDFHHR--L 62

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           +  E+ + +  L +  +S+ L   NI LA+   ++ PE + Y  RQ +EEA+H+ T+Q+ 
Sbjct: 63  SPAEKHVFENVLAYLTTSDILAMRNIGLAVMEKMTAPELQIYQARQVYEEALHTWTYQHC 122

Query: 135 ITSLGLDEGELFNMYREVPSITAK 158
           I SLGLD+ E++N YR VP I AK
Sbjct: 123 IESLGLDQQEIYNRYRVVPQIHAK 146


>gi|94986920|ref|YP_594853.1| ribonucleotide reductase, beta subunit [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731169|emb|CAJ54531.1| Ribonucleotide reductase, beta subunit [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 333

 Score =  129 bits (323), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 60/142 (42%), Positives = 90/142 (63%), Gaps = 2/142 (1%)

Query: 17  VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           VN  DKR++N ++D+NQLLP +Y WAW+ +L A  NHW P E+ M  D+  +   + LT 
Sbjct: 3   VNASDKRIVNGKTDINQLLPFRYPWAWDFFLKANQNHWTPLEISMSQDV--YDYNHTLTT 60

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
           +ER +    L +  +S+ L   NI LA+   ++ PE + Y  RQ +EEA+H+ T+Q+ I 
Sbjct: 61  NERHVFDNVLAYLTTSDILAMRNIGLAVMEKMTAPELQIYQARQVYEEALHTWTYQHCIE 120

Query: 137 SLGLDEGELFNMYREVPSITAK 158
           SLGL++ E++N YR VP I  K
Sbjct: 121 SLGLEQSEIYNRYRVVPEIYGK 142


>gi|301629349|ref|XP_002943805.1| PREDICTED: ribonucleoside-diphosphate reductase subunit beta-like,
           partial [Xenopus (Silurana) tropicalis]
          Length = 120

 Score =  128 bits (322), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 54/86 (62%), Positives = 70/86 (81%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           ++RVN  DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+ALWK  NG
Sbjct: 35  QRRVNAADKRIINGQTDVNQLVPFKYKWAWEKYLATCANHWMPQEVNMTRDIALWKDPNG 94

Query: 74  LTDDERLMIKRNLGFFASSESLVANN 99
           LT+DER +++RNLGFF +++SL ANN
Sbjct: 95  LTEDERRIVRRNLGFFTTADSLAANN 120


>gi|254492407|ref|ZP_05105579.1| ribonucleoside-diphosphate reductase, beta subunit [Methylophaga
           thiooxidans DMS010]
 gi|224462299|gb|EEF78576.1| ribonucleoside-diphosphate reductase, beta subunit [Methylophaga
           thiooxydans DMS010]
          Length = 383

 Score =  128 bits (321), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 93/148 (62%), Gaps = 2/148 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K +N DDKR++N  +D+NQL P KY WAW  +L+A  NHW P ++ M  D+  ++ K  L
Sbjct: 51  KAINADDKRVINGEADINQLAPFKYPWAWNYFLNANKNHWTPLDINMAQDVHDYRHK--L 108

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           T +ER + +  L +  +S+ L   NI LA+   ++ PE + Y  RQ +EEA+H+ T+Q+ 
Sbjct: 109 TLEERHVYENVLSYLTTSDILAMRNIGLAVMEKMTAPELQIYQARQVYEEALHTWTYQHC 168

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWA 162
           I ++GLD+ E++N YR VP I  K   A
Sbjct: 169 IETIGLDQSEIYNRYRVVPEIHQKIKLA 196


>gi|254449372|ref|ZP_05062814.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium HTCC5015]
 gi|198261018|gb|EDY85321.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium HTCC5015]
          Length = 404

 Score =  128 bits (321), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 64/174 (36%), Positives = 101/174 (58%), Gaps = 2/174 (1%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +   T  + +  G   V  +DK+++N  +D+NQL P KY WAWE +L+A  NHW P ++ 
Sbjct: 59  IPEQTNAAQMSGGVNPVKAEDKKVVNGMADINQLAPFKYPWAWEYFLNANKNHWTPLDIN 118

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+  +  K  LT +ER +    L +  +S+ +   NI LA+   +S PE + Y  RQ
Sbjct: 119 MAQDVHDFHHK--LTLEERHVYTNVLSYLTTSDIMAMRNIGLAVMEKMSAPELQIYQARQ 176

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
            +EE++H+ T+Q+ I +LGLD+GE++N YR VP I AK   A +   ++  P  
Sbjct: 177 VYEESLHTWTYQHCIETLGLDQGEVYNRYRVVPEINAKIQIANRRLNSVMRPDI 230


>gi|311696539|gb|ADP99412.1| ribonucleotide-diphosphate reductase beta subunit [marine bacterium
           HP15]
          Length = 352

 Score =  127 bits (319), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 2/178 (1%)

Query: 17  VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           VNVDDKR++N  +D+NQL P KY WAWE +++A  NHW P +V M  D+  +  +  LT 
Sbjct: 23  VNVDDKRVINGETDINQLAPFKYPWAWEYFMNANKNHWTPLDVNMAQDVHDYHHR--LTA 80

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
            E+ + +  L +  +S+ L   NI LA+   +S PE + Y  RQ +EEA+H+  +Q+ I 
Sbjct: 81  PEKHVYENVLAYLTTSDILAMRNIGLAVMEKMSAPELQIYQARQVYEEAMHTWAYQHCIE 140

Query: 137 SLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           +L LD+ E++N YR VP+I  K   A +       P  +  NK      +   L F  
Sbjct: 141 TLNLDQSEIYNRYRVVPAINGKIQIANRRLDAAMRPDMNLRNKDDLQEFIMSYLFFAA 198


>gi|149375674|ref|ZP_01893443.1| Ribonucleotide reductase, beta subunit [Marinobacter algicola
           DG893]
 gi|149360076|gb|EDM48531.1| Ribonucleotide reductase, beta subunit [Marinobacter algicola
           DG893]
          Length = 352

 Score =  127 bits (318), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 64/160 (40%), Positives = 95/160 (59%), Gaps = 3/160 (1%)

Query: 4   NTGLSPI-QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           NT   P    G   VNVDDKR++N  +D+NQL P KY WAWE +++A  NHW P +V M 
Sbjct: 9   NTQTRPAAHEGPAPVNVDDKRVINGETDINQLAPFKYPWAWEYFMNANKNHWTPLDVNMA 68

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D+  +  +  L+  E+ + +  L +  +S+ L   NI LA+   +S PE + Y  RQ +
Sbjct: 69  QDVHDYHHR--LSAPEKHVYENVLAYLTTSDILAMRNIGLAVMEKMSAPELQIYQARQVY 126

Query: 123 EEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWA 162
           EEA+H+  +Q+ I +L LD+ E++N YR VP+I  K   A
Sbjct: 127 EEAMHTWAYQHCIETLNLDQSEIYNRYRVVPAINGKIQMA 166


>gi|83649535|ref|YP_437970.1| ribonucleotide reductase subunit beta [Hahella chejuensis KCTC
           2396]
 gi|83637578|gb|ABC33545.1| Ribonucleotide reductase, beta subunit [Hahella chejuensis KCTC
           2396]
          Length = 405

 Score =  125 bits (313), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 65/177 (36%), Positives = 102/177 (57%), Gaps = 5/177 (2%)

Query: 17  VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           VN DDKR++N  +D+NQL P KY WAWE +L+A  NHW P ++ M  D+  +  K  LT 
Sbjct: 76  VNPDDKRVVNGMTDINQLAPFKYPWAWEFFLNANKNHWTPLDINMSQDVYDYHHK--LTL 133

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
           +E+ + +  L +  +S+ L   NI LA+   +S PE + Y  RQ +EE++H+ T+Q+ I 
Sbjct: 134 EEKHVYENVLAYLTTSDILAMRNIGLAVMEKMSAPELQIYQARQVYEESLHTWTYQHCIE 193

Query: 137 SLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           ++GLD+ E++N YR  P+I  K     +    L  P     N R R  + T  + ++
Sbjct: 194 TIGLDQSEIYNRYRVTPAIYRKIKMGNERISALLRPDI---NLRNRDDLETFVMAYI 247


>gi|153875510|ref|ZP_02003277.1| ribonucleotide-diphosphate reductase beta subunit [Beggiatoa sp.
           PS]
 gi|152068026|gb|EDN66723.1| ribonucleotide-diphosphate reductase beta subunit [Beggiatoa sp.
           PS]
          Length = 374

 Score =  124 bits (310), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 63/170 (37%), Positives = 103/170 (60%), Gaps = 5/170 (2%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           ++ L  I  G KR +  D +++  R  DV Q +P+KY    E++L+A  N W+P E+PM 
Sbjct: 24  SSSLDAISIGTKRPSSSDIKIIGGRGYDVRQPIPVKYTSVRERFLNARKNFWIPNEIPMG 83

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
           +D   W +   LT+ E  + K N+ +  +S++LV +N+  AI +H++  E RQY   Q  
Sbjct: 84  EDKLQWNT-GLLTEAEMWLFKSNISYLTASDNLVPDNLDNAILKHITANEMRQYFRHQIM 142

Query: 123 EEAVHSHTFQYIITSLGLDE---GELFNMYREVPSITAKANWALQYTQTL 169
           EE+ H  ++ +I+ S GLDE   G++FN+Y+EVP++T K NW L +T  +
Sbjct: 143 EESNHIESYLFILESFGLDEKGQGQIFNLYQEVPALTEKLNWNLTFTNNV 192


>gi|317122809|ref|YP_004102812.1| ribonucleoside-diphosphate reductase [Thermaerobacter marianensis
           DSM 12885]
 gi|315592789|gb|ADU52085.1| Ribonucleoside-diphosphate reductase [Thermaerobacter marianensis
           DSM 12885]
          Length = 336

 Score =  117 bits (293), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 58/137 (42%), Positives = 86/137 (62%), Gaps = 2/137 (1%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
           QL PL+Y WA+        N W P E+P+ DD+  W+ +  LTDDER  ++  LGFF   
Sbjct: 22  QLFPLRYPWAYAHAQQGKRNTWFPEEIPLADDVRDWELR--LTDDERRAVELLLGFFNPM 79

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
           ESLV +N+V++IY  L+ PE R YL RQ +EEA H+  F+Y++ +L +D   +F  +R+V
Sbjct: 80  ESLVTHNLVMSIYPLLTPPEVRLYLARQIWEEANHTMAFEYVLKTLPVDRERVFAAHRDV 139

Query: 153 PSITAKANWALQYTQTL 169
           P+I AK  +  + T+ L
Sbjct: 140 PAIRAKEAFQQELTRQL 156


>gi|289677031|ref|ZP_06497921.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. syringae FF5]
          Length = 151

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 49/83 (59%), Positives = 62/83 (74%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL+ ++    RV VD+K M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 69  GLAELEGASARVAVDEKMMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTADI 128

Query: 66  ALWKSKNGLTDDERLMIKRNLGF 88
           ALWK+  GLTDDER ++ RNLGF
Sbjct: 129 ALWKNPEGLTDDERRIVMRNLGF 151


>gi|313903043|ref|ZP_07836438.1| Ribonucleoside-diphosphate reductase [Thermaerobacter subterraneus
           DSM 13965]
 gi|313466767|gb|EFR62286.1| Ribonucleoside-diphosphate reductase [Thermaerobacter subterraneus
           DSM 13965]
          Length = 336

 Score =  116 bits (290), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 58/137 (42%), Positives = 85/137 (62%), Gaps = 2/137 (1%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
           QL PL+Y WA+        N W P E+P+ DD+  W+ +  LTDDER  ++  LGFF   
Sbjct: 22  QLFPLRYPWAYAHAQQGKRNTWFPEEIPLADDVRDWELR--LTDDERRAVELLLGFFNPM 79

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
           ESLV +N+V++IY  L+ PE R YL RQ +EEA H+  F+Y++ +L +D   +F  +R V
Sbjct: 80  ESLVTHNLVMSIYPLLTPPEIRLYLARQIWEEANHTMAFEYVLKTLPVDRERVFAAHRNV 139

Query: 153 PSITAKANWALQYTQTL 169
           P+I AK  +  + T+ L
Sbjct: 140 PAIRAKEAFQQELTRQL 156


>gi|221633388|ref|YP_002522613.1| ribonucleotide-diphosphate reductase subunit beta [Thermomicrobium
           roseum DSM 5159]
 gi|221156578|gb|ACM05705.1| ribonucleoside-diphosphate reductase, beta subunit [Thermomicrobium
           roseum DSM 5159]
          Length = 328

 Score =  112 bits (280), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 58/142 (40%), Positives = 86/142 (60%), Gaps = 3/142 (2%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
           +L PL + WA+     A +N W P EVP+ DD+  W  +  L+D+ER  ++  LGFF   
Sbjct: 15  ELFPLSHPWAYAHVQQAKHNTWFPEEVPLHDDVRDWHER--LSDEERRAVEMFLGFFNPM 72

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
           ESLV  N++L++YR ++ PE R YL RQA+EEA H   F+Y+I +L LD   +F ++ E 
Sbjct: 73  ESLVTTNLLLSLYRAVTAPEARLYLARQAWEEANHVMAFEYVIKTLPLDRERVFGLHVEH 132

Query: 153 PSITAKANWALQYT-QTLSSPS 173
           P++ AK  +  Q   Q L +P 
Sbjct: 133 PAVAAKELFQRQLAEQWLVTPD 154


>gi|225164890|ref|ZP_03727109.1| Ribonucleoside-diphosphate reductase [Opitutaceae bacterium TAV2]
 gi|224800504|gb|EEG18881.1| Ribonucleoside-diphosphate reductase [Opitutaceae bacterium TAV2]
          Length = 362

 Score =  112 bits (279), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 90/149 (60%), Gaps = 1/149 (0%)

Query: 22  KRMLNARSDVN-QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           KR++N R  +   LLPLKY WA++ Y +   NHW P ++PM  D+  W+    +TD ER 
Sbjct: 26  KRVINGRETMTFNLLPLKYQWAYDLYRTMKANHWEPEDIPMGKDIEQWRDPRAVTDQERW 85

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
           +I+  +G+F+++E +V +NI       ++ PE +  L R A EE +H+ +  Y+I+SLG+
Sbjct: 86  IIRMGIGYFSAAEGIVGDNIQHVTRELVTAPELKLVLGRHAHEENIHADSLLYMISSLGI 145

Query: 141 DEGELFNMYREVPSITAKANWALQYTQTL 169
           +  E   M+ ++P+I  K  + ++ ++ L
Sbjct: 146 NPHECEAMFEDIPTIVRKNEFVVKNSRQL 174


>gi|328950373|ref|YP_004367708.1| Ribonucleoside-diphosphate reductase [Marinithermus hydrothermalis
           DSM 14884]
 gi|328450697|gb|AEB11598.1| Ribonucleoside-diphosphate reductase [Marinithermus hydrothermalis
           DSM 14884]
          Length = 332

 Score =  112 bits (279), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 59/150 (39%), Positives = 87/150 (58%), Gaps = 3/150 (2%)

Query: 21  DKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER 79
           D R+    S +  +L PL + WA+       +N W P EVP+ +D+  W  K  LT++ER
Sbjct: 4   DHRLFGPPSLEAIELFPLAHPWAYAHVQQGKHNTWFPEEVPLGEDVRDWHEK--LTEEER 61

Query: 80  LMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
                 LGFF   ESLV  N+VLAI+ ++  PE R YL RQ +EEA H+  F+Y++ +L 
Sbjct: 62  HAASLLLGFFNPMESLVTQNLVLAIFPYVRAPEARLYLARQIWEEANHTMAFEYVLKTLP 121

Query: 140 LDEGELFNMYREVPSITAKANWALQYTQTL 169
           +D  ++F  +REVP++ AK  +    TQ L
Sbjct: 122 VDREKVFAAHREVPAVRAKEAFQTALTQAL 151


>gi|254442775|ref|ZP_05056251.1| ribonucleoside-diphosphate reductase, beta subunit
           [Verrucomicrobiae bacterium DG1235]
 gi|198257083|gb|EDY81391.1| ribonucleoside-diphosphate reductase, beta subunit
           [Verrucomicrobiae bacterium DG1235]
          Length = 361

 Score =  108 bits (269), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 88/149 (59%), Gaps = 1/149 (0%)

Query: 22  KRMLNARSDVN-QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           K+++N R  +   LLPLKY WA+E Y +   NHW P ++ M  D+  WK    +++ ER 
Sbjct: 26  KKIINGRETMTFNLLPLKYNWAYEIYKTMKANHWEPEDIGMNKDIEQWKDTEQVSEIERW 85

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
           +I   +G+F+++E +V +NI+  I   ++ PE +  L R A EE VH+ +  Y+I+SLG+
Sbjct: 86  IIMMGIGYFSAAEGIVGDNILHVIRELVTAPELKLVLGRHAHEENVHADSLLYMISSLGI 145

Query: 141 DEGELFNMYREVPSITAKANWALQYTQTL 169
           +  E   M+ ++P+I  K  +  + +  L
Sbjct: 146 NPHECEAMFEDIPTIVKKNEFVTRQSHAL 174


>gi|294055010|ref|YP_003548668.1| Ribonucleoside-diphosphate reductase [Coraliomargarita akajimensis
           DSM 45221]
 gi|293614343|gb|ADE54498.1| Ribonucleoside-diphosphate reductase [Coraliomargarita akajimensis
           DSM 45221]
          Length = 360

 Score =  107 bits (266), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 86/136 (63%), Gaps = 1/136 (0%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           +LPLKY WA++ Y +  NNHW P ++PMQ D+ LW+S + L+D ER +IK  +G+F+++E
Sbjct: 39  ILPLKYQWAYDLYKTMKNNHWEPEDIPMQKDVELWRSAD-LSDAERWIIKMAIGYFSAAE 97

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVP 153
            +V +NI       ++ PE +  L R A EE +H+ +  Y+I+SLG++  E   M+ ++ 
Sbjct: 98  GIVGDNIQHVTRELVTAPELKLLLGRHAHEENIHADSLVYMISSLGINPHECEAMFEDID 157

Query: 154 SITAKANWALQYTQTL 169
           +I  K  + +  ++ L
Sbjct: 158 TIERKTAFVVNNSRGL 173


>gi|284043177|ref|YP_003393517.1| ribonucleoside-diphosphate reductase [Conexibacter woesei DSM
           14684]
 gi|283947398|gb|ADB50142.1| Ribonucleoside-diphosphate reductase [Conexibacter woesei DSM
           14684]
          Length = 364

 Score =  106 bits (265), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 89/148 (60%), Gaps = 1/148 (0%)

Query: 23  RMLNARSDVN-QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           R++  R  +   LLPL+YGWA+E Y +   NHW P +V M  D+  W+ +  L++ +R +
Sbjct: 30  RVVGGRETMTFNLLPLRYGWAYELYRTMKANHWEPEDVQMAKDIEQWRDERALSEIDRWI 89

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           ++  +G+F+++E +V +NI+  +   ++  E +  L R A EE +H+ +  Y+I+SLG+D
Sbjct: 90  VRMAIGYFSAAEGIVGDNILHVVRELMTASELKLVLGRHAHEENIHADSLLYMISSLGID 149

Query: 142 EGELFNMYREVPSITAKANWALQYTQTL 169
             E   M+ ++P+I AK  +    +Q L
Sbjct: 150 PHECEAMFDDIPTIRAKNAFVTSASQAL 177


>gi|171913278|ref|ZP_02928748.1| ribonucleotide-diphosphate reductase subunit beta [Verrucomicrobium
           spinosum DSM 4136]
          Length = 361

 Score =  105 bits (261), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 84/138 (60%), Gaps = 1/138 (0%)

Query: 22  KRMLNARSDVN-QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           KR++N R  +   LLPLKY WA++ Y     NHW P ++ MQ D+  W+S + + + ER 
Sbjct: 26  KRVINGRQTMTFNLLPLKYQWAYDLYRVMKANHWEPEDIQMQKDVEQWRSVDQVAEVERW 85

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
           +I   +G+F+++E +V +NI   +   ++ PE +  L R A EE +H+ +  Y+I+SLG+
Sbjct: 86  IIMMGIGYFSAAEGIVGDNIQHVVRELVTAPELKLVLGRHAHEENIHADSLLYMISSLGI 145

Query: 141 DEGELFNMYREVPSITAK 158
           +  E   M+ ++P+I  K
Sbjct: 146 NPHECEAMFEDIPTIVKK 163


>gi|289677030|ref|ZP_06497920.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. syringae FF5]
          Length = 243

 Score =  103 bits (257), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 43/85 (50%), Positives = 58/85 (68%)

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           NPE RQY+LRQAFEEA+H+H +QY I SL +DEGE+FNMY E+PS+  KA W L+YT+++
Sbjct: 1   NPEGRQYILRQAFEEAIHTHAYQYCIESLAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSI 60

Query: 170 SSPSFHYWNKRRRSRILTRSLRFLC 194
           S P F          +L   + + C
Sbjct: 61  SDPKFETGTVDTDKELLRNLIAYYC 85


>gi|311898297|dbj|BAJ30705.1| putative ribonucleoside-diphosphate reductase subunit beta
           [Kitasatospora setae KM-6054]
          Length = 339

 Score = 94.7 bits (234), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 84/157 (53%), Gaps = 12/157 (7%)

Query: 20  DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER 79
           D K+ML        L P++Y   +++Y  A  N W   EV +  D+A       L++ ER
Sbjct: 5   DRKKMLLDPGFELTLRPMRYPSFYDRYRDAIKNTWTVEEVDLHSDVA---DLAKLSEGER 61

Query: 80  LMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
            MI R + FFA+ +S+V+NN+VL++Y+H+++PE R YL RQ FEEAVH    Q+ +T L 
Sbjct: 62  HMIGRLVAFFATGDSIVSNNVVLSLYKHINSPEARLYLSRQLFEEAVH---VQFYLTLLD 118

Query: 140 L------DEGELFNMYREVPSITAKANWALQYTQTLS 170
                  D    F     +PSI  KA +  +Y   + 
Sbjct: 119 TYLPDPEDRNAAFAAVENIPSIAQKAQFCFKYMNAVD 155


>gi|256825983|ref|YP_003149943.1| ribonucleotide reductase subunit beta [Kytococcus sedentarius DSM
           20547]
 gi|256689376|gb|ACV07178.1| ribonucleotide reductase, beta subunit [Kytococcus sedentarius DSM
           20547]
          Length = 365

 Score = 94.4 bits (233), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 85/156 (54%), Gaps = 5/156 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   +E +  A  N W   E+ +  DLA     N L+  ER ++ R + FFA+ +
Sbjct: 44  LRPMRYPQFYEMFRDAIKNTWTVEEIDLHSDLA--DLHNKLSPAERHLVSRLVAFFATGD 101

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV- 152
           ++VANN+VL +Y H+++PE R YL RQ FEEAVH   +  ++ +   DE E F  +  V 
Sbjct: 102 TIVANNLVLNLYEHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYVPDEAERFEAFAAVE 161

Query: 153 --PSITAKANWALQYTQTLSSPSFHYWNKRRRSRIL 186
             PSI  KA +   +  ++ +       ++RR  +L
Sbjct: 162 NIPSIRTKAEFCFTWIDSIENLGQLETKEQRRQFLL 197


>gi|239944172|ref|ZP_04696109.1| putative ribonucleoside-diphosphate reductase small subunit
           [Streptomyces roseosporus NRRL 15998]
 gi|239990628|ref|ZP_04711292.1| putative ribonucleoside-diphosphate reductase small subunit
           [Streptomyces roseosporus NRRL 11379]
 gi|291447643|ref|ZP_06587033.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           roseosporus NRRL 15998]
 gi|291350590|gb|EFE77494.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           roseosporus NRRL 15998]
          Length = 338

 Score = 93.6 bits (231), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/159 (34%), Positives = 88/159 (55%), Gaps = 13/159 (8%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
             +DK +L+   ++  L P++Y   +E+Y  A  N W   EV +  D+A       L+  
Sbjct: 3   TTEDKNLLDPGFELT-LRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVA---DLAKLSPG 58

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+ MI R + FFA+ +S+V+NN+VL +Y+H+++PE R YL RQ FEEAVH    Q+ +T 
Sbjct: 59  EQHMIGRLVAFFATGDSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHV---QFYLTL 115

Query: 138 LGL------DEGELFNMYREVPSITAKANWALQYTQTLS 170
           L        D    F+   E+PSI  KA +  ++  ++ 
Sbjct: 116 LDTYLPDPDDRAAAFDAVEEIPSIREKAQFCFKWMDSVE 154


>gi|254384639|ref|ZP_04999978.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces sp.
           Mg1]
 gi|194343523|gb|EDX24489.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces sp.
           Mg1]
          Length = 338

 Score = 93.6 bits (231), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/154 (36%), Positives = 86/154 (55%), Gaps = 13/154 (8%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           + D K +L+   ++  L P++Y   +E+Y  A  N W   EV +  D+A       LT  
Sbjct: 3   STDQKNLLDPGFELT-LRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVA---DLAKLTPA 58

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+ MI R + FFA+ +S+V+NN+VL +Y+H+++PE R YL RQ FEEAVH    Q+ +T 
Sbjct: 59  EQHMIGRLVAFFATGDSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHV---QFYLTL 115

Query: 138 LGL------DEGELFNMYREVPSITAKANWALQY 165
           L        D    F+   E+PSI  KA +  ++
Sbjct: 116 LDTYLPDPDDRAAAFDAVEEIPSIREKAQFCFKW 149


>gi|117928932|ref|YP_873483.1| ribonucleoside-diphosphate reductase [Acidothermus cellulolyticus
           11B]
 gi|117649395|gb|ABK53497.1| Ribonucleoside-diphosphate reductase [Acidothermus cellulolyticus
           11B]
          Length = 348

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 82/139 (58%), Gaps = 6/139 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   +E++ +A  N W   EV +  DLA  +    L+  E  ++KR + FFA+ +
Sbjct: 28  LRPMRYPHFFERFKAAIRNTWTVEEVDLHSDLADLRK---LSPAEHHLVKRLVAFFATGD 84

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE---GELFNMYR 150
           ++VANN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ +   DE    E F    
Sbjct: 85  TIVANNLVLNLYQHINSPEARLYLSRQLFEEAVHVQFYLALLDTYITDERERAEAFAAIE 144

Query: 151 EVPSITAKANWALQYTQTL 169
            +PSI  KA++  ++  ++
Sbjct: 145 NIPSIKRKADFCFRWIDSI 163


>gi|302536805|ref|ZP_07289147.1| ribonucleoside-diphosphate reductase subunit beta [Streptomyces sp.
           C]
 gi|302445700|gb|EFL17516.1| ribonucleoside-diphosphate reductase subunit beta [Streptomyces sp.
           C]
          Length = 356

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/142 (37%), Positives = 80/142 (56%), Gaps = 12/142 (8%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   +E+Y  A  N W   EV +  D+A       LT  E+ MI R + FFA+ +
Sbjct: 36  LRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVA---DLAKLTPAEQHMIGRLVAFFATGD 92

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL------DEGELFN 147
           S+V+NN+VL +Y+H+++PE R YL RQ FEEAVH    Q+ +T L        D    F+
Sbjct: 93  SIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVH---VQFYLTLLDTYLPDPDDRAAAFD 149

Query: 148 MYREVPSITAKANWALQYTQTL 169
              E+PSI  KA +  ++  ++
Sbjct: 150 AVEEIPSIREKAQFCFKWMDSV 171


>gi|310823070|ref|YP_003955428.1| ribonucleoside-diphosphate reductase subunit beta [Stigmatella
           aurantiaca DW4/3-1]
 gi|309396142|gb|ADO73601.1| Ribonucleoside-diphosphate reductase, beta subunit [Stigmatella
           aurantiaca DW4/3-1]
          Length = 336

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/152 (37%), Positives = 85/152 (55%), Gaps = 12/152 (7%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +LNA  ++  L P+ Y   +E Y +A  N W   EV    DL   +SK  +TD ER +I 
Sbjct: 2   LLNAGMNLT-LRPMAYPVFFEMYRNAIKNTWTVEEVDFSTDLVDLRSK--MTDAERHLIH 58

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--- 140
           R + FFA+ +S+V NN+VL +Y+HL+ PE R YL RQ +EEA+H    Q+ +T L     
Sbjct: 59  RLVAFFATGDSIVGNNLVLNLYKHLNAPEARMYLSRQLYEEALHV---QFYLTLLDTYVP 115

Query: 141 ---DEGELFNMYREVPSITAKANWALQYTQTL 169
              D  + F     +PSI  KA + L++  ++
Sbjct: 116 DPADRAKAFAAIDNIPSIQRKARFCLKWMDSI 147


>gi|108763495|ref|YP_633213.1| ribonucleoside-diphosphate reductase subunit beta [Myxococcus
           xanthus DK 1622]
 gi|108467375|gb|ABF92560.1| ribonucleoside-diphosphate reductase, beta subunit [Myxococcus
           xanthus DK 1622]
          Length = 349

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 82/156 (52%), Gaps = 5/156 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+ Y   +E Y +A  N W   EV    DL   +SK  +TD ER +I R + FFA+ +
Sbjct: 24  LRPMAYPQFFEMYRNAIKNTWTVEEVDFSTDLVDLRSK--MTDAERHLIHRLVAFFATGD 81

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
           S+V NN+VL +Y+HL+ PE R YL RQ +EEA+H   +  ++ +   D  E    F    
Sbjct: 82  SIVGNNLVLNLYKHLNAPEARMYLSRQLYEEALHVQFYLTLLDTYVPDPAERAMAFAAVD 141

Query: 151 EVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRIL 186
            +PSI  KA + +++  ++           RR  +L
Sbjct: 142 NIPSIQRKAQFCMKWMDSIQGLDTLQTKAHRRQFLL 177


>gi|157953769|ref|YP_001498660.1| hypothetical protein AR158_C579R [Paramecium bursaria Chlorella
           virus AR158]
 gi|156068417|gb|ABU44124.1| hypothetical protein AR158_C579R [Paramecium bursaria Chlorella
           virus AR158]
          Length = 324

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 72/136 (52%), Gaps = 5/136 (3%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
            P++Y   W+ Y  A    W   EVP+  D+  W+ K  L DDER  IK  LGFFA S+ 
Sbjct: 19  FPIQYPDMWDMYKKAVATFWTTEEVPLNADVVDWREK--LNDDERHFIKHILGFFAGSDG 76

Query: 95  LVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE---GELFNMYRE 151
           +V  N+       ++ PE RQ+   Q F E++HS  +  +I +L  DE    ELF+    
Sbjct: 77  IVMENLQTNFSVEVTVPEARQFYAYQTFNESIHSEQYALLIDALISDEQERNELFDAIEN 136

Query: 152 VPSITAKANWALQYTQ 167
           +P++  KA WA ++ +
Sbjct: 137 IPAVHNKAKWAQKWLE 152


>gi|9632043|ref|NP_048832.1| hypothetical protein PBCV1_A476R [Paramecium bursaria Chlorella
           virus 1]
 gi|1620147|gb|AAC96843.1| contains ribonucleotide reductase (RR) signature; similar to
           tobacco RR small subunit, corresponds to Swiss-Prot
           Accession Number P49730 [Paramecium bursaria Chlorella
           virus 1]
          Length = 324

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 73/140 (52%), Gaps = 5/140 (3%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
            P++Y   W+ Y  A    W   EVP+  D+  W+ K  L DDER  IK  LGFFA S+ 
Sbjct: 19  FPIQYPDMWDMYKKAVATFWTTEEVPLNADVVDWREK--LNDDERHFIKHILGFFAGSDG 76

Query: 95  LVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE---GELFNMYRE 151
           +V  N+       ++ PE RQ+   Q F E++HS  +  +I +L  DE    ELF+    
Sbjct: 77  IVMENLQTNFSVEVTVPEARQFYAYQTFNESIHSEQYALLIDALISDEQERNELFDAIEN 136

Query: 152 VPSITAKANWALQYTQTLSS 171
           +P++  KA WA ++ +   S
Sbjct: 137 IPAVHNKAKWAQKWLEPGKS 156


>gi|328884923|emb|CCA58162.1| Ribonucleotide reductase of class Ia (aerobic),beta subunit
           [Streptomyces venezuelae ATCC 10712]
          Length = 338

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 86/157 (54%), Gaps = 13/157 (8%)

Query: 20  DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER 79
           D+K +L+   ++  L P++Y   +E+Y  A  N W   EV +  D+A       LT  E+
Sbjct: 5   DEKNLLDPGFELT-LRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVA---DLAKLTPGEQ 60

Query: 80  LMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
            MI R + FFA+ +S+VANN+VL +Y+H+++PE R YL RQ FEEAVH    Q+ +T L 
Sbjct: 61  HMIGRLVAFFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHV---QFYLTLLD 117

Query: 140 L------DEGELFNMYREVPSITAKANWALQYTQTLS 170
                  D    F     +PSI  KA +  ++  ++ 
Sbjct: 118 TYLPDPEDRAAAFAAVENIPSIREKAQFCFRWMDSVE 154


>gi|271967540|ref|YP_003341736.1| ribonucleoside-diphosphate reductase [Streptosporangium roseum DSM
           43021]
 gi|270510715|gb|ACZ88993.1| Ribonucleoside-diphosphate reductase [Streptosporangium roseum DSM
           43021]
          Length = 331

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 52/141 (36%), Positives = 79/141 (56%), Gaps = 6/141 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   +E+Y +A  N W   EV +  DLA       +T +ER +I R + FFA+ +
Sbjct: 11  LRPMRYPEFYERYRAAIRNTWTVEEVDLNSDLA---DLARMTPEERHLINRLVAFFATGD 67

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
           S+VANN+VL +Y+H++ PE R YL RQ FEEAVH   +  ++ +   D  E    F    
Sbjct: 68  SIVANNLVLNLYQHVNAPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDHDERVKAFAAVE 127

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +PSI  KA +  ++  +L  
Sbjct: 128 HIPSIRNKAEFCFRWIDSLGG 148


>gi|282861024|ref|ZP_06270089.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. ACTE]
 gi|282563682|gb|EFB69219.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. ACTE]
          Length = 340

 Score = 91.7 bits (226), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 80/144 (55%), Gaps = 12/144 (8%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   +E+Y  A  N W   EV +  D+A       L+  E+ MI R + FFA+ +
Sbjct: 20  LRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVA---DLAKLSPGEQHMIGRLVAFFATGD 76

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL------DEGELFN 147
           S+V+NN+VL +Y+H+++PE R YL RQ FEEAVH    Q+ +T L        D    F+
Sbjct: 77  SIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHV---QFYLTLLDTYLPDPEDRAAAFD 133

Query: 148 MYREVPSITAKANWALQYTQTLSS 171
              E+PSI  KA +  ++  ++  
Sbjct: 134 AVEEIPSIREKAQFCFKWMDSVEE 157


>gi|182436093|ref|YP_001823812.1| putative ribonucleoside-diphosphate reductase small subunit
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|326776718|ref|ZP_08235983.1| Ribonucleoside-diphosphate reductase [Streptomyces cf. griseus
           XylebKG-1]
 gi|178464609|dbj|BAG19129.1| putative ribonucleoside-diphosphate reductase small subunit
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|326657051|gb|EGE41897.1| Ribonucleoside-diphosphate reductase [Streptomyces cf. griseus
           XylebKG-1]
          Length = 338

 Score = 91.7 bits (226), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 89/158 (56%), Gaps = 13/158 (8%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           + ++K +L+   ++  L P++Y   +E+Y  A  N W   EV +  D+A       L+  
Sbjct: 3   STEEKNLLDPGFELT-LRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVA---DLAKLSPG 58

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+ MI R + FFA+ +S+V+NN+VL +Y+H+++PE R YL RQ FEEAVH    Q+ +T 
Sbjct: 59  EQHMIGRLVAFFATGDSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHV---QFYLTL 115

Query: 138 LGL------DEGELFNMYREVPSITAKANWALQYTQTL 169
           L        D    F+   E+PSI  KA +  ++  ++
Sbjct: 116 LDTYLPDPDDRAAAFDAVEEIPSIREKAQFCFRWMDSV 153


>gi|320008647|gb|ADW03497.1| Ribonucleoside-diphosphate reductase [Streptomyces flavogriseus
           ATCC 33331]
          Length = 338

 Score = 91.7 bits (226), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 80/143 (55%), Gaps = 12/143 (8%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   +E+Y  A  N W   EV +  D+A       L+  E+ MI R + FFA+ +
Sbjct: 18  LRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVA---DLAKLSPGEQHMIGRLVAFFATGD 74

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL------DEGELFN 147
           S+V+NN+VL +Y+H+++PE R YL RQ FEEAVH    Q+ +T L        D    F+
Sbjct: 75  SIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHV---QFYLTLLDTYLPDPEDRAAAFD 131

Query: 148 MYREVPSITAKANWALQYTQTLS 170
              E+PSI  KA +  ++  ++ 
Sbjct: 132 AVEEIPSIREKAQFCFRWMDSVE 154


>gi|162452149|ref|YP_001614516.1| ribonucleotide-diphosphate reductase [Sorangium cellulosum 'So ce
           56']
 gi|161162731|emb|CAN94036.1| Ribonucleotide-diphosphate reductase [Sorangium cellulosum 'So ce
           56']
          Length = 339

 Score = 91.3 bits (225), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 80/144 (55%), Gaps = 12/144 (8%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+ Y   +E Y SA  N W   EV    D+   +    +TD ER +++R + FFA+ +
Sbjct: 19  LRPMAYPAFFEMYRSAIKNTWTVEEVDFSTDVGDLRK---MTDAERHLVQRLVAFFATGD 75

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL------DEGELFN 147
           S+VANN+VL +YRH++ PE R YL RQ +EEA+H    Q+ +T L        D    F 
Sbjct: 76  SIVANNLVLNLYRHINAPEARMYLSRQLYEEALH---VQFYLTLLDTYIPDPEDRHRAFA 132

Query: 148 MYREVPSITAKANWALQYTQTLSS 171
               +PSI  KA++ +++  ++ S
Sbjct: 133 AVENIPSIRQKADFCMRWLDSVES 156


>gi|329939692|ref|ZP_08288993.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           griseoaurantiacus M045]
 gi|329301262|gb|EGG45157.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           griseoaurantiacus M045]
          Length = 347

 Score = 90.9 bits (224), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 59/164 (35%), Positives = 85/164 (51%), Gaps = 22/164 (13%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   +E+Y  A  N W   EV +  D+A       LT  ER +I R + FFA+ +
Sbjct: 27  LRPMRYPDFYERYRDAIKNTWHVEEVDLHSDVA---DLAKLTPAERHLIGRLVAFFATGD 83

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL------DEGELFN 147
           S+VANN+VL +Y+H+++PE R YL RQ FEEAVH    Q+ +T L        D    F 
Sbjct: 84  SIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHV---QFYLTLLDTYLPDPDDRAAAFA 140

Query: 148 MYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
               +PSI  KA +  ++  ++           R  R+ TRS R
Sbjct: 141 AVENIPSIREKAEFCFRWMDSVE----------RLDRLETRSDR 174


>gi|290957506|ref|YP_003488688.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           scabiei 87.22]
 gi|260647032|emb|CBG70131.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           scabiei 87.22]
          Length = 355

 Score = 90.5 bits (223), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 86/153 (56%), Gaps = 7/153 (4%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           D+ +L+   ++  L P++Y   +E+Y  A  N W   EV +  D+A       L++ E+ 
Sbjct: 23  DQNLLDPGFELT-LRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVA---DLAKLSEGEQH 78

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
           MI R + FFA+ +S+VANN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ +   
Sbjct: 79  MIGRLVAFFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLP 138

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLS 170
           D  +    F     +PSI  KA +  ++  ++ 
Sbjct: 139 DPADRVAAFAAVENIPSIREKAEFCFKWMDSVE 171


>gi|297192180|ref|ZP_06909578.1| ribonucleoside-diphosphate reductase subunit beta protein
           [Streptomyces pristinaespiralis ATCC 25486]
 gi|197720175|gb|EDY64083.1| ribonucleoside-diphosphate reductase subunit beta protein
           [Streptomyces pristinaespiralis ATCC 25486]
          Length = 340

 Score = 90.5 bits (223), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 80/144 (55%), Gaps = 12/144 (8%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   +E+Y  A  N W   EV +  D+A       L+  E+ MI R + FFA+ +
Sbjct: 20  LRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVA---DLAKLSPGEQHMIGRLVAFFATGD 76

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL------DEGELFN 147
           S+VANN+VL +Y+H+++PE R YL RQ FEEAVH    Q+ +T L        D    F 
Sbjct: 77  SIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHV---QFYLTLLDTYLPDPEDRTAAFA 133

Query: 148 MYREVPSITAKANWALQYTQTLSS 171
               +PSI  KA++  ++  ++ S
Sbjct: 134 AVENIPSIREKASFCFKWMDSVES 157


>gi|88856487|ref|ZP_01131145.1| ribonucleotide-diphosphate reductase beta subunit [marine
           actinobacterium PHSC20C1]
 gi|88814354|gb|EAR24218.1| ribonucleotide-diphosphate reductase beta subunit [marine
           actinobacterium PHSC20C1]
          Length = 332

 Score = 90.1 bits (222), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 79/141 (56%), Gaps = 3/141 (2%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY WA + Y  A  N W P E+ + +D+A +K    +TD+ER  +   + +F  +E
Sbjct: 14  LKPIKYQWAMDLYDQAVANTWFPNEIQLGEDIADFKK---MTDEERHAVTFLMSYFNPNE 70

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVP 153
            LV   +   +Y ++S  EC  YL +Q +EEA H  +F+Y++ +  +D    +N + ++P
Sbjct: 71  LLVNKALAFGVYPYVSAAECSLYLAKQMWEEANHCMSFEYVLETFPIDREAAYNSHIDIP 130

Query: 154 SITAKANWALQYTQTLSSPSF 174
           S+  K  + L+Y + ++  + 
Sbjct: 131 SMARKEEFELKYIRRMTEQTL 151


>gi|291303011|ref|YP_003514289.1| Ribonucleoside-diphosphate reductase [Stackebrandtia nassauensis
           DSM 44728]
 gi|290572231|gb|ADD45196.1| Ribonucleoside-diphosphate reductase [Stackebrandtia nassauensis
           DSM 44728]
          Length = 338

 Score = 90.1 bits (222), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 85/154 (55%), Gaps = 13/154 (8%)

Query: 23  RMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMI 82
           R+L+   D+  L P++Y   +E++ +A  N W   EV +  DL    +    TD ER +I
Sbjct: 8   RLLDPGMDLT-LRPMRYPDFYEQFRAAIRNTWTVEEVDLASDLPDLAT---FTDSERHLI 63

Query: 83  KRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL-- 140
            R + FFA+ +++VANN+VL +Y+H++ PE R YL RQ +EEAVH    Q+ +T L    
Sbjct: 64  NRLVAFFATGDTIVANNLVLNLYKHVNAPEARLYLSRQLYEEAVH---VQFYLTLLDTYL 120

Query: 141 ----DEGELFNMYREVPSITAKANWALQYTQTLS 170
               D  + F     +PSI  KA +  ++  T+ 
Sbjct: 121 PDPEDRVKAFAAVEHIPSIKEKAEFCFKWIDTID 154


>gi|295836584|ref|ZP_06823517.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. SPB74]
 gi|197697282|gb|EDY44215.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. SPB74]
          Length = 345

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 79/143 (55%), Gaps = 12/143 (8%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   +E+Y +A  N W   EV +  D+A       LT  E+ +I R + FFA+ +
Sbjct: 25  LRPMRYPDFYERYRNAIKNTWTVEEVDLHSDVA---DLAKLTPGEQHLIGRLVAFFATGD 81

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL------DEGELFN 147
           S+VANN+VL +Y+H+++PE R YL RQ FEEAVH    Q+ +T L        D  + F 
Sbjct: 82  SIVANNLVLTLYKHINSPEARLYLSRQLFEEAVH---VQFYLTLLDTYLPDPDDRADAFA 138

Query: 148 MYREVPSITAKANWALQYTQTLS 170
               +PSI  KA +  ++   + 
Sbjct: 139 AVENIPSIREKAEFCFKWIDEVE 161


>gi|155370749|ref|YP_001426283.1| hypothetical protein FR483_N651L [Paramecium bursaria Chlorella
           virus FR483]
 gi|155124069|gb|ABT15936.1| hypothetical protein FR483_N651L [Paramecium bursaria Chlorella
           virus FR483]
          Length = 348

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 5/134 (3%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
            P+KY   +  Y  A +  W   EVP+  D+A W+ K  L DDER  IK  LGFFA S+ 
Sbjct: 43  FPIKYPDVFAMYKKAVSTFWTVEEVPLNQDIADWRDK--LNDDERHFIKTILGFFAGSDG 100

Query: 95  LVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYRE 151
           +V  NI       +++P  R +   Q F E++HS  +  ++ +L  D+ E   LF+    
Sbjct: 101 MVMENIANNFSTEVTDPSARLFYAYQMFNESIHSEMYSLLLDALIEDDAERNSLFDAIET 160

Query: 152 VPSITAKANWALQY 165
           +P++  KA WA ++
Sbjct: 161 IPAVGKKAAWAQKF 174


>gi|155122339|gb|ABT14207.1| hypothetical protein MT325_M653L [Paramecium bursaria chlorella
           virus MT325]
          Length = 326

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 5/134 (3%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
            P+KY   +  Y  A +  W   EVP+  D+A W+ K  L DDER  IK  LGFFA S+ 
Sbjct: 21  FPIKYPDVFAMYKKAVSTFWTVEEVPLNQDIADWRDK--LNDDERHFIKTILGFFAGSDG 78

Query: 95  LVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYRE 151
           +V  NI       +++P  R +   Q F E++HS  +  ++ +L  D+ E   LF+    
Sbjct: 79  MVMENIANNFSTEVTDPSARLFYAYQMFNESIHSEMYSLLLDALIEDDAERNSLFDAIET 138

Query: 152 VPSITAKANWALQY 165
           +P++  KA WA ++
Sbjct: 139 IPAVGKKAAWAQKF 152


>gi|157952945|ref|YP_001497837.1| hypothetical protein NY2A_B641R [Paramecium bursaria Chlorella
           virus NY2A]
 gi|155123172|gb|ABT15040.1| hypothetical protein NY2A_B641R [Paramecium bursaria Chlorella
           virus NY2A]
          Length = 324

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 49/131 (37%), Positives = 68/131 (51%), Gaps = 5/131 (3%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
            P++Y   W  Y  A    W   EVP+  D+A W+ K  L +DER  IK  LGFFA S+ 
Sbjct: 19  FPIQYHDLWNMYKKAVATFWTTEEVPLNADVADWREK--LNNDERHFIKHILGFFAGSDG 76

Query: 95  LVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYRE 151
           +V  N+       +  PE RQ+   Q F E+VHS  +  +I +L  DE E   LF+    
Sbjct: 77  IVMENLQTNFGVEVMAPEARQFYAYQTFNESVHSEMYALLIDALISDEQERLDLFDAIET 136

Query: 152 VPSITAKANWA 162
           +P++  KA WA
Sbjct: 137 IPAVHNKAKWA 147


>gi|159040364|ref|YP_001539617.1| ribonucleoside-diphosphate reductase [Salinispora arenicola
           CNS-205]
 gi|157919199|gb|ABW00627.1| Ribonucleoside-diphosphate reductase [Salinispora arenicola
           CNS-205]
          Length = 350

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 90/171 (52%), Gaps = 13/171 (7%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           A    ++    GE+ + +D    L  R       P++Y   ++++  A  N W   EV +
Sbjct: 5   AETRTVTAATTGERHMLLDPGMDLTLR-------PMRYPHFFDRFKEAIKNTWTVEEVDL 57

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             DLA       L+  ER ++ R + FFA+ +++VANN+VL +Y+H+++PE R YL RQ 
Sbjct: 58  HSDLA---DLAKLSPAERHLVSRLVAFFATGDTIVANNLVLNLYQHVNSPEGRLYLSRQL 114

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMYREV---PSITAKANWALQYTQTL 169
           FEEAVH   +  ++ +   DE E F  +  V   PSI  KA +  ++  ++
Sbjct: 115 FEEAVHVQFYLNLLDTYVPDEKERFAAFAAVENIPSIARKAEFCFRWIDSI 165


>gi|302867100|ref|YP_003835737.1| ribonucleotide reductase [Micromonospora aurantiaca ATCC 27029]
 gi|315506490|ref|YP_004085377.1| ribonucleotide reductase [Micromonospora sp. L5]
 gi|302569959|gb|ADL46161.1| ribonucleotide reductase [Micromonospora aurantiaca ATCC 27029]
 gi|315413109|gb|ADU11226.1| ribonucleotide reductase [Micromonospora sp. L5]
          Length = 342

 Score = 89.0 bits (219), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 80/139 (57%), Gaps = 6/139 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   ++++  A  N W   EV +  DLA       L+  ER ++ R + FFA+ +
Sbjct: 22  LRPMRYPRFFDRFKDAIKNTWTVEEVDLHSDLA---DLAKLSPAERHLVSRLVAFFATGD 78

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV- 152
           ++VANN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ +   DE E F  +  V 
Sbjct: 79  TIVANNLVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPDEKERFAAFDAVE 138

Query: 153 --PSITAKANWALQYTQTL 169
             PSI  KA +  ++  ++
Sbjct: 139 NIPSIARKAEFCFRWIDSI 157


>gi|148273612|ref|YP_001223173.1| ribonucleotide-diphosphate reductase subunit beta [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
 gi|170782700|ref|YP_001711034.1| ribonucleotide-diphosphate reductase subunit beta [Clavibacter
           michiganensis subsp. sepedonicus]
 gi|147831542|emb|CAN02508.1| putative ribonucleoside-diphosphate reductase beta subunit
           [Clavibacter michiganensis subsp. michiganensis NCPPB
           382]
 gi|169157270|emb|CAQ02455.1| ribonucleoside-diphosphate reductase beta subunit [Clavibacter
           michiganensis subsp. sepedonicus]
          Length = 331

 Score = 89.0 bits (219), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 79/140 (56%), Gaps = 3/140 (2%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+ Y WA + Y  A  N W P E+ + +D+A +K    +TD+ER  I   + +F  +E
Sbjct: 15  LKPVNYQWAMDLYDQAVANTWFPNEIQLGEDIADFKK---MTDEERHAITFLMSYFNPNE 71

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVP 153
            LV   +   +Y +++ PEC  YL +Q +EEA H  +F+Y++ +  +D    +N + ++P
Sbjct: 72  LLVNKALAFGVYPYINAPECHLYLAKQMWEEANHCMSFEYVLETFPIDREAAYNSHVDIP 131

Query: 154 SITAKANWALQYTQTLSSPS 173
           S+  K  + +++ + ++  +
Sbjct: 132 SMARKEEFEVKFIKRMTEQT 151


>gi|239982206|ref|ZP_04704730.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           albus J1074]
 gi|291454052|ref|ZP_06593442.1| ribonucleotide-diphosphate reductase subunit small [Streptomyces
           albus J1074]
 gi|291357001|gb|EFE83903.1| ribonucleotide-diphosphate reductase subunit small [Streptomyces
           albus J1074]
          Length = 350

 Score = 89.0 bits (219), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 79/143 (55%), Gaps = 12/143 (8%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   +E+Y  A  N W   EV +  D+A       L+  E+ +I R + FFA+ +
Sbjct: 30  LRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVA---DLAKLSPGEQHLIGRLVAFFATGD 86

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL------DEGELFN 147
           S+VANN+VL +Y+H+++PE R YL RQ FEEAVH    Q+ +T L        D  + F 
Sbjct: 87  SIVANNLVLTLYKHINSPEARLYLSRQLFEEAVH---VQFYLTLLDTYLPDPADRADAFA 143

Query: 148 MYREVPSITAKANWALQYTQTLS 170
               +PSI  KA +  ++  ++ 
Sbjct: 144 AVENIPSIREKAEFCFRWMDSVD 166


>gi|256391238|ref|YP_003112802.1| ribonucleoside-diphosphate reductase [Catenulispora acidiphila DSM
           44928]
 gi|256357464|gb|ACU70961.1| Ribonucleoside-diphosphate reductase [Catenulispora acidiphila DSM
           44928]
          Length = 331

 Score = 88.6 bits (218), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 49/141 (34%), Positives = 80/141 (56%), Gaps = 6/141 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   +++Y  A  N W   EV +  DL      + L+  ER ++ R + FFA+ +
Sbjct: 11  LRPMRYPHFFDRYRDAIKNTWTVEEVDLHSDLT---DLDRLSAAERHLVSRLVAFFATGD 67

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG---ELFNMYR 150
           ++VANN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ +   DE    E F    
Sbjct: 68  TIVANNLVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPDEDERTEAFAAVE 127

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +PSI  KA +  ++  +L +
Sbjct: 128 NIPSIRRKAEFCFRWIDSLGN 148


>gi|62866936|gb|AAY17359.1| ribonucleotide reductase small subunit [Haemonchus contortus]
          Length = 374

 Score = 88.6 bits (218), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 75/143 (52%), Gaps = 7/143 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + PLKY   W  Y  A  + W   EV +  D+A W+    +TD+ER  I R L FFA+S+
Sbjct: 62  IFPLKYHDIWAFYKKAVASFWTVEEVDLAKDMADWEK---MTDNERFFISRVLAFFAASD 118

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +  PE R +   Q   E +HS  +  +I +   DE E   LFN   
Sbjct: 119 GIVNENLVERFSKEVQVPEARFFYGSQIAIENIHSEMYSKLIETYIRDEKERNILFNAIF 178

Query: 151 EVPSITAKANWALQYT-QTLSSP 172
           EVP I  KA WA++   QT+++P
Sbjct: 179 EVPCIAKKAEWAVKMGLQTITAP 201


>gi|28493649|ref|NP_787810.1| ribonucleotide-diphosphate reductase subunit beta [Tropheryma
           whipplei str. Twist]
 gi|28572842|ref|NP_789622.1| ribonucleotide-diphosphate reductase subunit beta [Tropheryma
           whipplei TW08/27]
 gi|28410975|emb|CAD67360.1| ribonucleotide-diphosphate reductase small chain [Tropheryma
           whipplei TW08/27]
 gi|28476691|gb|AAO44779.1| ribonucleotide reductase beta chain [Tropheryma whipplei str.
           Twist]
          Length = 327

 Score = 88.6 bits (218), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 80/140 (57%), Gaps = 3/140 (2%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y WA + Y  A  N W P E+ + +D+A +K    +T +E+  +   + +F  +E
Sbjct: 14  LKPVRYQWAMDLYEQAVANTWFPNEIQLGEDIADFKK---MTHEEKHAVTFLMSYFNPNE 70

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVP 153
            LV   +   +Y +++ PEC  YL +Q +EEA H  +F+Y++ +  +D  E ++ + EVP
Sbjct: 71  LLVNKALAFGVYPYINAPECHLYLAKQMWEEANHCMSFEYVLETFPIDREEAYSSHIEVP 130

Query: 154 SITAKANWALQYTQTLSSPS 173
           S+  K  + ++Y + ++  +
Sbjct: 131 SMARKEEFEVEYIRRMTEET 150


>gi|42523460|ref|NP_968840.1| ribonucleotide-diphosphate reductase small chain [Bdellovibrio
           bacteriovorus HD100]
 gi|39575666|emb|CAE79833.1| ribonucleotide-diphosphate reductase small chain [Bdellovibrio
           bacteriovorus HD100]
          Length = 336

 Score = 88.6 bits (218), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 82/143 (57%), Gaps = 11/143 (7%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   +E Y +   N W   EV    DL    SK  +T+ E+ +I+R + FFA+ +
Sbjct: 15  LRPMKYPIFYEMYKNGIKNTWTVDEVDFSTDLVDLHSK--MTESEKHLIRRLVAFFATGD 72

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL-----GLDE-GELFN 147
           S+V NN+VL +Y+H+++PE R YL RQ +EEA+H    Q+ +T L       DE  E F 
Sbjct: 73  SIVGNNLVLNLYKHVNSPEGRMYLSRQLYEEALHV---QFYLTLLDNYIPNPDERAEAFA 129

Query: 148 MYREVPSITAKANWALQYTQTLS 170
               +PSI  KA++  ++  +++
Sbjct: 130 AVENIPSIKKKADFCYKWIDSIN 152


>gi|318060206|ref|ZP_07978929.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. SA3_actG]
 gi|318077113|ref|ZP_07984445.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. SA3_actF]
          Length = 345

 Score = 88.2 bits (217), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 51/142 (35%), Positives = 78/142 (54%), Gaps = 12/142 (8%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   +E+Y  A  N W   EV +  D++       LT  E+ +I R + FFA+ +
Sbjct: 25  LRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVS---DLAKLTPGEQHLIGRLVAFFATGD 81

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL------DEGELFN 147
           S+V+NN+VL +Y+H+++PE R YL RQ FEEAVH    Q+ +T L        D    F 
Sbjct: 82  SIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVH---VQFYLTLLDTYLPDPDDRAAAFA 138

Query: 148 MYREVPSITAKANWALQYTQTL 169
               +PSI AKA +  ++   +
Sbjct: 139 AVENIPSIRAKAEFCFKWIDEV 160


>gi|302521843|ref|ZP_07274185.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. SPB78]
 gi|302430738|gb|EFL02554.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. SPB78]
          Length = 345

 Score = 88.2 bits (217), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 51/138 (36%), Positives = 77/138 (55%), Gaps = 12/138 (8%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   +E+Y  A  N W   EV +  D++       LT  E+ +I R + FFA+ +
Sbjct: 25  LRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVS---DLAKLTPGEQHLIGRLVAFFATGD 81

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL------DEGELFN 147
           S+V+NN+VL +Y+H+++PE R YL RQ FEEAVH    Q+ +T L        D    F 
Sbjct: 82  SIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVH---VQFYLTLLDTYLPDPDDRAAAFA 138

Query: 148 MYREVPSITAKANWALQY 165
               +PSI AKA +  ++
Sbjct: 139 AVENIPSIRAKAEFCFKW 156


>gi|294631326|ref|ZP_06709886.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. e14]
 gi|292834659|gb|EFF93008.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. e14]
          Length = 339

 Score = 88.2 bits (217), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 52/143 (36%), Positives = 77/143 (53%), Gaps = 12/143 (8%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   +E+Y  A  N W   EV +  D+A       LT  E+ +I R + FFA+ +
Sbjct: 19  LRPMRYPDFYERYRDAIKNTWHVEEVDLHSDVA---DLAKLTPGEQHLIGRLVAFFATGD 75

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL------DEGELFN 147
           S+VANN+VL +Y+H+++PE R YL RQ FEEAVH    Q+ +T L        D    F 
Sbjct: 76  SIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHV---QFYLTLLDTYLPDPDDRAAAFA 132

Query: 148 MYREVPSITAKANWALQYTQTLS 170
               +PSI  KA +   +  ++ 
Sbjct: 133 AVENIPSIREKAEFCFTWMDSVE 155


>gi|302558498|ref|ZP_07310840.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           griseoflavus Tu4000]
 gi|302476116|gb|EFL39209.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           griseoflavus Tu4000]
          Length = 341

 Score = 88.2 bits (217), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 79/143 (55%), Gaps = 12/143 (8%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   +E+Y  A  N W   EV +  D+A       L+ +E+ +I R + FFA+ +
Sbjct: 21  LRPMRYPDFYERYRDAIKNTWHVEEVDLHSDVA---DLAKLSPEEQHLIGRLVAFFATGD 77

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL------DEGELFN 147
           S+VANN+VL +Y+H+++PE R YL RQ FEEAVH    Q+ +T L        D    F 
Sbjct: 78  SIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHV---QFYLTLLDTYLPDPDDRAAAFA 134

Query: 148 MYREVPSITAKANWALQYTQTLS 170
               +PSI  KA +  ++  ++ 
Sbjct: 135 AVENIPSIREKAEFCFRWMDSVE 157


>gi|256785295|ref|ZP_05523726.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           lividans TK24]
 gi|289769189|ref|ZP_06528567.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           lividans TK24]
 gi|289699388|gb|EFD66817.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           lividans TK24]
          Length = 343

 Score = 88.2 bits (217), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 12/144 (8%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   +E+Y  A  N W   EV +  D+A       L+  E+ +I R + FFA+ +
Sbjct: 23  LRPMRYPDFYERYRDAIKNTWHVEEVDLHSDVA---DLAKLSPMEQHLIGRLVAFFATGD 79

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL------DEGELFN 147
           S+VANN+VL +Y+H+++PE R YL RQ FEEAVH    Q+ +T L        D    F 
Sbjct: 80  SIVANNLVLTLYKHINSPEARLYLSRQLFEEAVH---VQFYLTLLDTYLPDPEDRAAAFA 136

Query: 148 MYREVPSITAKANWALQYTQTLSS 171
               +PSI  KA +  ++  ++ S
Sbjct: 137 AVENIPSIREKAEFCFRWMDSVES 160


>gi|21223593|ref|NP_629372.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           coelicolor A3(2)]
 gi|7328345|emb|CAB82486.1| class I ribonucleotide-diphosphate reductase small subunit chain
           [Streptomyces coelicolor A3(2)]
 gi|8546891|emb|CAB94610.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           coelicolor A3(2)]
          Length = 343

 Score = 88.2 bits (217), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 12/144 (8%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   +E+Y  A  N W   EV +  D+A       L+  E+ +I R + FFA+ +
Sbjct: 23  LRPMRYPDFYERYRDAIKNTWHVEEVDLHSDVA---DLAKLSPMEQHLIGRLVAFFATGD 79

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL------DEGELFN 147
           S+VANN+VL +Y+H+++PE R YL RQ FEEAVH    Q+ +T L        D    F 
Sbjct: 80  SIVANNLVLTLYKHINSPEARLYLSRQLFEEAVH---VQFYLTLLDTYLPDPEDRAAAFA 136

Query: 148 MYREVPSITAKANWALQYTQTLSS 171
               +PSI  KA +  ++  ++ S
Sbjct: 137 AVENIPSIREKAEFCFRWMDSVES 160


>gi|238061574|ref|ZP_04606283.1| ribonucleoside-diphosphate reductase [Micromonospora sp. ATCC
           39149]
 gi|237883385|gb|EEP72213.1| ribonucleoside-diphosphate reductase [Micromonospora sp. ATCC
           39149]
          Length = 344

 Score = 87.8 bits (216), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 80/139 (57%), Gaps = 6/139 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   ++++  A  N W   EV +  DLA       L+  ER ++ R + FFA+ +
Sbjct: 24  LRPMRYPHFFDRFKDAIKNTWTVEEVDLHSDLA---DLARLSPAERHLVSRLVAFFATGD 80

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY---R 150
           ++VANN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ +   DE E F  +    
Sbjct: 81  TIVANNLVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPDERERFAAFAAIE 140

Query: 151 EVPSITAKANWALQYTQTL 169
            +PSI  KA +  ++  ++
Sbjct: 141 NIPSIRRKAEFCFRWIDSI 159


>gi|29829569|ref|NP_824203.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           avermitilis MA-4680]
 gi|29606677|dbj|BAC70738.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptomyces avermitilis MA-4680]
          Length = 338

 Score = 87.8 bits (216), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 52/138 (37%), Positives = 76/138 (55%), Gaps = 12/138 (8%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   +E+Y  A  N W   EV +  D+A       LT  E+ +I R + FFA+ +
Sbjct: 18  LRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVA---DLAKLTPAEQHLIGRLVAFFATGD 74

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL------DEGELFN 147
           S+VANN+VL +Y+H+++PE R YL RQ FEEAVH    Q+ +T L        D    F 
Sbjct: 75  SIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHV---QFYLTLLDTYLPDPEDRTAAFA 131

Query: 148 MYREVPSITAKANWALQY 165
               +PSI  KA +  ++
Sbjct: 132 AVENIPSIREKAEFCFKW 149


>gi|302542646|ref|ZP_07294988.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302460264|gb|EFL23357.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           himastatinicus ATCC 53653]
          Length = 343

 Score = 87.4 bits (215), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 12/142 (8%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   +++Y  A  N W   EV +  D+A       L+  E+ MI R + FFA+ +
Sbjct: 23  LRPMRYPQFYDRYRDAIKNTWTVEEVDLHSDVA---DLAKLSPGEQHMISRLVAFFATGD 79

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL------DEGELFN 147
           S+V+NN+VL +Y+H+++PE R YL RQ FEEAVH    Q+ +T L        D    F 
Sbjct: 80  SIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVH---VQFYLTLLDTYLPDPDDRAASFA 136

Query: 148 MYREVPSITAKANWALQYTQTL 169
               +PSI  KA +  ++  ++
Sbjct: 137 AVENIPSIREKAEFCFRWMDSV 158


>gi|149916691|ref|ZP_01905193.1| putative ribonucleoside-diphosphate reductase beta chain
           [Plesiocystis pacifica SIR-1]
 gi|149822408|gb|EDM81797.1| putative ribonucleoside-diphosphate reductase beta chain
           [Plesiocystis pacifica SIR-1]
          Length = 356

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 78/141 (55%), Gaps = 5/141 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+ Y   + +Y  A  N W   EV    DL     + G    ER +I+R + FFA+ +
Sbjct: 35  LRPMAYPDFYAQYRQAIRNTWTVEEVDFSTDLRDLAERMGPA--ERHLIQRLVAFFATGD 92

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
           S+VANN+VL++YRHL+ PE R YL RQ +EEA+H   +  ++ +   D  +    F    
Sbjct: 93  SIVANNLVLSLYRHLNAPEARMYLSRQLYEEALHVQFYLTLLDTYVPDPDQRHAAFAAVE 152

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +PSI  KA + L++  T+++
Sbjct: 153 TIPSIRRKAEFCLRWQDTVAA 173


>gi|302554045|ref|ZP_07306387.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           viridochromogenes DSM 40736]
 gi|302471663|gb|EFL34756.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           viridochromogenes DSM 40736]
          Length = 341

 Score = 87.4 bits (215), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/142 (35%), Positives = 79/142 (55%), Gaps = 12/142 (8%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   +E+Y  A  N W   EV +  D+A       L+  E+ +I R + FFA+ +
Sbjct: 21  LRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVA---DLAKLSPAEQHLIGRLVAFFATGD 77

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL------DEGELFN 147
           S+VANN+VL +Y+H+++PE R YL RQ FEEAVH    Q+ +T L        D    F 
Sbjct: 78  SIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHV---QFYLTLLDTYLPDPEDRTAAFA 134

Query: 148 MYREVPSITAKANWALQYTQTL 169
               +PSI  KA++  ++  ++
Sbjct: 135 AVENIPSIREKASFCFKWMDSV 156


>gi|239929012|ref|ZP_04685965.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           ghanaensis ATCC 14672]
          Length = 339

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/142 (35%), Positives = 77/142 (54%), Gaps = 12/142 (8%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   +E+Y  A  N W   EV +  D+A       L+  E+ +I R + FFA+ +
Sbjct: 19  LRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVA---DLAKLSPAEQHLIGRLVAFFATGD 75

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL------DEGELFN 147
           S+VANN+VL +Y+H+++PE R YL RQ FEEAVH    Q+ +T L        D    F 
Sbjct: 76  SIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHV---QFYLTLLDTYLPDPDDRAAAFA 132

Query: 148 MYREVPSITAKANWALQYTQTL 169
               +PSI  KA +   +  ++
Sbjct: 133 AVENIPSIREKAEFCFTWMDSV 154


>gi|11544904|emb|CAC17630.1| class I ribonucleotide-diphosphate reductase small subunit chain
           [Streptomyces jumonjinensis]
          Length = 322

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/143 (35%), Positives = 77/143 (53%), Gaps = 12/143 (8%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   +E+Y  A  N W   EV +  D+        LT  E+ +I R + FFA+ +
Sbjct: 19  LRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVT---DLAKLTPGEQHLIGRLVAFFATGD 75

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL------DEGELFN 147
           S+VANN+VL +Y+H+++PE R YL RQ FEEAVH    Q+ +T L        D    F 
Sbjct: 76  SIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHV---QFYLTLLDTYLPDPEDRTAAFA 132

Query: 148 MYREVPSITAKANWALQYTQTLS 170
               +PSI  KA +  ++  ++ 
Sbjct: 133 AVENIPSIREKAQFCFKWMDSVE 155


>gi|291437353|ref|ZP_06576743.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           ghanaensis ATCC 14672]
 gi|291340248|gb|EFE67204.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           ghanaensis ATCC 14672]
          Length = 340

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/142 (35%), Positives = 77/142 (54%), Gaps = 12/142 (8%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   +E+Y  A  N W   EV +  D+A       L+  E+ +I R + FFA+ +
Sbjct: 20  LRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVA---DLAKLSPAEQHLIGRLVAFFATGD 76

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL------DEGELFN 147
           S+VANN+VL +Y+H+++PE R YL RQ FEEAVH    Q+ +T L        D    F 
Sbjct: 77  SIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHV---QFYLTLLDTYLPDPDDRAAAFA 133

Query: 148 MYREVPSITAKANWALQYTQTL 169
               +PSI  KA +   +  ++
Sbjct: 134 AVENIPSIREKAEFCFTWMDSV 155


>gi|297157411|gb|ADI07123.1| ribonucleoside-diphosphate reductase [Streptomyces bingchenggensis
           BCW-1]
          Length = 340

 Score = 86.7 bits (213), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 78/143 (54%), Gaps = 12/143 (8%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   +++Y  A  N W   EV +  D+A       L+  E+ +I R + FFA+ +
Sbjct: 20  LRPMRYPDFYDRYRDAIKNTWTVEEVDLHSDVA---DLAKLSPGEQHLIGRLVAFFATGD 76

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL------DEGELFN 147
           S+VANN+VL +Y+H+++PE R YL RQ FEEAVH    Q+ +T L        D    F 
Sbjct: 77  SIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHV---QFYLTLLDTYLPDPDDRAAAFA 133

Query: 148 MYREVPSITAKANWALQYTQTLS 170
               +PSI  KA +  ++  ++ 
Sbjct: 134 AVENIPSIREKAEFCFRWIDSVD 156


>gi|297202281|ref|ZP_06919678.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sviceus ATCC 29083]
 gi|197710199|gb|EDY54233.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sviceus ATCC 29083]
          Length = 340

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 76/138 (55%), Gaps = 12/138 (8%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   +E+Y  A  N W   EV +  D+        L+  E+ +I R + FFA+ +
Sbjct: 20  LRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVT---DLAKLSPAEQHLIGRLVAFFATGD 76

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL------DEGELFN 147
           S+VANN+VL +Y+H+++PE R YL RQ FEEAVH    Q+ +T L        D    F+
Sbjct: 77  SIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHV---QFYLTLLDTYLPDPQDRAAAFD 133

Query: 148 MYREVPSITAKANWALQY 165
               +PSI  KA +  ++
Sbjct: 134 AVENIPSIREKAEFCFRW 151


>gi|145596896|ref|YP_001161193.1| ribonucleoside-diphosphate reductase [Salinispora tropica CNB-440]
 gi|145306233|gb|ABP56815.1| Ribonucleoside-diphosphate reductase [Salinispora tropica CNB-440]
          Length = 350

 Score = 85.9 bits (211), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 79/139 (56%), Gaps = 6/139 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   ++++  A  N W   EV +  DL        L+  ER ++ R + FFA+ +
Sbjct: 30  LRPMRYPHFFDRFKEAIKNTWTVEEVDLHSDLG---DLAKLSSAERHLVSRLVAFFATGD 86

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV- 152
           ++VANN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ +   +E E F  +  V 
Sbjct: 87  TIVANNLVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPEEKERFAAFAAVE 146

Query: 153 --PSITAKANWALQYTQTL 169
             PSI  KA +  ++  ++
Sbjct: 147 NIPSIARKAEFCFRWIDSI 165


>gi|330467634|ref|YP_004405377.1| ribonucleoside-diphosphate reductase [Verrucosispora maris
           AB-18-032]
 gi|328810605|gb|AEB44777.1| Ribonucleoside-diphosphate reductase [Verrucosispora maris
           AB-18-032]
          Length = 342

 Score = 85.9 bits (211), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 79/139 (56%), Gaps = 6/139 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   ++++  A  N W   EV +  DLA       L+  E+ ++ R + FFA+ +
Sbjct: 22  LRPMRYPQFFDRFKDAIRNTWTVEEVDLHADLA---DLAKLSPAEQHLVSRLVAFFATGD 78

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG---ELFNMYR 150
           ++VANN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ +   DE    E F    
Sbjct: 79  TIVANNLVLNLYQHINSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPDEKQRYEAFAAVE 138

Query: 151 EVPSITAKANWALQYTQTL 169
            +PSI  KA +  ++  ++
Sbjct: 139 NIPSIARKAEFCFKWIDSI 157


>gi|320585888|gb|EFW98567.1| ribonucleotide reductase small subunit [Grosmannia clavigera
           kw1407]
          Length = 378

 Score = 85.5 bits (210), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 80/166 (48%), Gaps = 10/166 (6%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           NNT +S I+A E      ++ +L   +    L P+KY   W+ Y     + W   E+ + 
Sbjct: 47  NNTAVSAIKAAEA-----EEPLLKENAQRFVLFPIKYHEIWQMYKKHEASFWTAEEIDLS 101

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            DL  W   N L DDER  +   L FFA+S+ +V  N+V      +  PE R +   Q  
Sbjct: 102 KDLHDWN--NRLNDDERFFVSHILAFFAASDGIVNENLVERFSAEVQVPEARCFYGFQIM 159

Query: 123 EEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
            E VHS T+  +I +   D  +   LFN    +P I  KA+WAL++
Sbjct: 160 MENVHSETYSLLIDTYIKDTAQRTHLFNAIDTIPCIRKKADWALKW 205


>gi|50955339|ref|YP_062627.1| ribonucleotide-diphosphate reductase subunit beta [Leifsonia xyli
           subsp. xyli str. CTCB07]
 gi|50951821|gb|AAT89522.1| ribonucleoside-diphosphate reductase, beta chain [Leifsonia xyli
           subsp. xyli str. CTCB07]
          Length = 329

 Score = 85.1 bits (209), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 80/140 (57%), Gaps = 3/140 (2%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY WA + Y  A  N W P E+ + +D+A +K    +TD+ER  +   + +F  +E
Sbjct: 14  LKPVKYQWAMDLYDQAVANTWFPNEIQIGEDIADFKK---MTDEERHAVTFLMSYFNPNE 70

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVP 153
            LV   +   +Y +++  E   YL +Q +EEA H  +F+Y++ +  +D  + +N + +VP
Sbjct: 71  LLVNKALAFGVYPYINAAEAHLYLAKQMWEEANHCMSFEYVLETFPIDREQAYNSHVDVP 130

Query: 154 SITAKANWALQYTQTLSSPS 173
           S+ +K  + +++ + ++  +
Sbjct: 131 SMASKEEFEVRFIKRMTEQA 150


>gi|86132508|ref|ZP_01051102.1| ribonucleoside-diphosphate reductase small chain [Dokdonia
           donghaensis MED134]
 gi|85817069|gb|EAQ38253.1| ribonucleoside-diphosphate reductase small chain [Dokdonia
           donghaensis MED134]
          Length = 328

 Score = 85.1 bits (209), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 77/154 (50%), Gaps = 8/154 (5%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +L    D   + P+++   WE Y  +  + W   E+ +  DL  WK K  LTDDER  IK
Sbjct: 7   ILAENKDRFVIFPIQHDDIWEWYKKSEASFWTAEEIDLHQDLVDWKGK--LTDDERYFIK 64

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
             L FFA+S+ +V  N+       +   E + +   Q   E +HS T+  +I +   DE 
Sbjct: 65  HILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDEV 124

Query: 144 E---LFNMYREVPSITAKANWALQYTQTLSSPSF 174
           E   LFN     P+I  KA+WAL++   + SPSF
Sbjct: 125 EKDKLFNALENFPAIKKKADWALKW---IDSPSF 155


>gi|254388985|ref|ZP_05004216.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           clavuligerus ATCC 27064]
 gi|294814921|ref|ZP_06773564.1| Ribonucleoside-diphosphate reductase beta chain protein
           [Streptomyces clavuligerus ATCC 27064]
 gi|326443293|ref|ZP_08218027.1| Ribonucleoside-diphosphate reductase [Streptomyces clavuligerus
           ATCC 27064]
 gi|197702703|gb|EDY48515.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           clavuligerus ATCC 27064]
 gi|218078699|emb|CAB90708.3| class Ia ribonucleotide-diphosphate reductase small subunit chain
           [Streptomyces clavuligerus ATCC 27064]
 gi|294327520|gb|EFG09163.1| Ribonucleoside-diphosphate reductase beta chain protein
           [Streptomyces clavuligerus ATCC 27064]
          Length = 339

 Score = 85.1 bits (209), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 77/142 (54%), Gaps = 12/142 (8%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   +E+Y  A  N W   EV +  D+        L+  E+ +I R + FFA+ +
Sbjct: 19  LRPMRYPDFYERYRDAIKNTWTVEEVDLHSDV---PDLAKLSPGEQHLIGRLVAFFATGD 75

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL------DEGELFN 147
           S+VANN+VL +Y+H+++PE R YL RQ FEEAVH    Q+ +T L        D    F 
Sbjct: 76  SIVANNLVLTLYKHINSPEARLYLSRQLFEEAVH---VQFYLTLLDTYLPDPEDRNAAFA 132

Query: 148 MYREVPSITAKANWALQYTQTL 169
               +PSI  KA +  ++  ++
Sbjct: 133 AVENIPSIREKAQFCFRWMDSV 154


>gi|260950985|ref|XP_002619789.1| hypothetical protein CLUG_00948 [Clavispora lusitaniae ATCC 42720]
 gi|238847361|gb|EEQ36825.1| hypothetical protein CLUG_00948 [Clavispora lusitaniae ATCC 42720]
          Length = 419

 Score = 85.1 bits (209), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 5/135 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W+ Y  A  + W   E+ +  D+  WK  N +TD+ER  I R L FFA+S+
Sbjct: 106 LFPIKYNEIWQMYKKAEASFWTAEEIDLSKDINDWK--NRMTDNERFFISRVLAFFAASD 163

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +  PE + +   Q   E +HS T+  +I S   D  E   LFN   
Sbjct: 164 GIVNENLVENFSAEVQIPEAKCFYGFQIMMENIHSETYSLLIDSYIKDPKEADFLFNAIE 223

Query: 151 EVPSITAKANWALQY 165
            +P I  KA WAL++
Sbjct: 224 NIPCIKKKAEWALRW 238


>gi|190572323|ref|YP_001970168.1| putative ribonucleotide diphosphate reductase, small chain
           [Stenotrophomonas maltophilia K279a]
 gi|190010245|emb|CAQ43853.1| putative ribonucleotide diphosphate reductase, small chain
           [Stenotrophomonas maltophilia K279a]
          Length = 339

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 88/158 (55%), Gaps = 5/158 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   ++ Y +A  N W   E+  Q D+    SK  ++  ER +I R + FFA+ +
Sbjct: 18  LRPMRYPQFYDMYRNAIKNTWTVEEINFQIDITDLHSK--MSPGERHLIHRLVAFFATGD 75

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
           S+V+NN+VL +Y+HL+ PE R YL RQ +EEA+H   +  ++ +   D  E    F+   
Sbjct: 76  SIVSNNLVLNLYQHLNAPEARMYLSRQLYEEALHVQFYLTLLDNYLPDPEERAKAFSAVE 135

Query: 151 EVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
            + SI  KA++  ++  ++ S +     ++RR  +L +
Sbjct: 136 NIDSIKKKADFCFKWIDSIQSLTRIETREQRRQFLLNQ 173


>gi|320107274|ref|YP_004182864.1| Ribonucleoside-diphosphate reductase [Terriglobus saanensis SP1PR4]
 gi|319925795|gb|ADV82870.1| Ribonucleoside-diphosphate reductase [Terriglobus saanensis SP1PR4]
          Length = 346

 Score = 85.1 bits (209), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 51/142 (35%), Positives = 81/142 (57%), Gaps = 11/142 (7%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   ++ +     N W   EV  Q DL   K +  LT  E   I+R + FFA+ +
Sbjct: 25  LRPMRYPQFYDMFRDGIKNTWTVEEVDFQTDLVDLKQR--LTPAEIHTIQRLVAFFATGD 82

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGE----LFN 147
           S+V+NN+VL +Y+H+++PE R YL RQ FEEAVH    Q+ +T L   + E E     F 
Sbjct: 83  SIVSNNLVLNLYKHINSPEARLYLSRQLFEEAVHV---QFYLTLLDNYIPEPEERNAAFA 139

Query: 148 MYREVPSITAKANWALQYTQTL 169
               +PSI+ KA++ +++  ++
Sbjct: 140 AVENIPSISKKADFCMKWMDSI 161


>gi|307328555|ref|ZP_07607729.1| Ribonucleoside-diphosphate reductase [Streptomyces violaceusniger
           Tu 4113]
 gi|306885823|gb|EFN16835.1| Ribonucleoside-diphosphate reductase [Streptomyces violaceusniger
           Tu 4113]
          Length = 340

 Score = 84.7 bits (208), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 92/181 (50%), Gaps = 17/181 (9%)

Query: 20  DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER 79
           D K +L+   ++  L P++Y   +++Y  A  N W   EV +  D+        L+  E+
Sbjct: 7   DTKNLLDPGFELT-LRPMRYPEFYDRYRDAIKNTWTVEEVDLHSDVT---DLAKLSPGEQ 62

Query: 80  LMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
            +I R + FFA+ +S+V+NN+VL +Y+H+++PE R YL RQ FEEAVH    Q+ +T L 
Sbjct: 63  HLIGRLVAFFATGDSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHV---QFYLTLLD 119

Query: 140 L------DEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
                  D    F     +PSI  KA +  ++  ++         K+ R R L   L  +
Sbjct: 120 TYLPDPDDRAAAFAAVENIPSIREKAEFCFRWMDSVEKID-RLETKQDRRRFL---LNLI 175

Query: 194 C 194
           C
Sbjct: 176 C 176


>gi|255079598|ref|XP_002503379.1| predicted protein [Micromonas sp. RCC299]
 gi|226518645|gb|ACO64637.1| predicted protein [Micromonas sp. RCC299]
          Length = 335

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 74/148 (50%), Gaps = 6/148 (4%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +L+   D   + P+KYG  WE Y  A  + W   EV + DD+  W   N L +DE+  IK
Sbjct: 17  LLDPNDDRFTMFPIKYGDIWEMYKKAEASFWTAEEVDLSDDMVHW---NKLNNDEKHFIK 73

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
             L FFA+S+ +V  N+ +     +  PE R +   Q   E +HS  +  +I +   D  
Sbjct: 74  HILAFFAASDGIVLENLGVRFMGEVQFPEARAFYGFQIAIENIHSEMYSLLIDAYVKDAQ 133

Query: 144 E---LFNMYREVPSITAKANWALQYTQT 168
           E   LF   + +P I  KA+WA ++ ++
Sbjct: 134 EKTYLFQAIQNIPCIAKKADWAFKWIES 161


>gi|163753569|ref|ZP_02160692.1| ribonucleoside-diphosphate reductase 1, beta subunit [Kordia
           algicida OT-1]
 gi|161325783|gb|EDP97109.1| ribonucleoside-diphosphate reductase 1, beta subunit [Kordia
           algicida OT-1]
          Length = 326

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 75/154 (48%), Gaps = 8/154 (5%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +L    D   + P+K+   WE Y  +  + W   E+ +  DL  W +K  L DDER  IK
Sbjct: 8   ILQENKDRFVIFPIKHADIWEWYKKSEASFWTAEEIDLHQDLTDWTTK--LNDDERYFIK 65

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
             L FFA+S+ +V  N+       +   E + +   Q   E +HS T+  +I +   DE 
Sbjct: 66  HILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDEA 125

Query: 144 E---LFNMYREVPSITAKANWALQYTQTLSSPSF 174
           E   LF      P+I  KA+WALQ+   + SPSF
Sbjct: 126 EKDKLFKAIENFPAIKKKADWALQW---IESPSF 156


>gi|11544907|emb|CAC17632.1| class I ribonucleotide-diphosphate reductase small chain
           [Streptomyces microflavus]
          Length = 321

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 78/140 (55%), Gaps = 6/140 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   +E+Y  A  N W   EV +  D+A       L+  E+ MI R + FFA+ +
Sbjct: 18  LRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVA---DLAKLSPGEQHMIGRLVAFFATGD 74

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV- 152
           S+VANN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ +   D  E    +  V 
Sbjct: 75  SIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPAERAAAFAAVE 134

Query: 153 --PSITAKANWALQYTQTLS 170
             PSI  KA +  ++  ++ 
Sbjct: 135 NIPSIRDKAQFCFKWMDSVE 154


>gi|168049349|ref|XP_001777126.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671569|gb|EDQ58119.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 325

 Score = 84.3 bits (207), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 74/144 (51%), Gaps = 8/144 (5%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+KY   WE Y  A  + W   EV +  DL  W++   LTD+ER  I   L FFA+S+
Sbjct: 16  MFPIKYPQVWEMYKKAEASFWTAEEVDLSADLKHWEA---LTDNERHFISHVLAFFAASD 72

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+ +   + +  PE R +   Q   E +HS  +  ++ +   D+ E   LFN   
Sbjct: 73  GIVLENLAVRFMKEIQIPEARAFYGFQIAIENIHSEMYSLLLEAYIKDQSEKHRLFNAIE 132

Query: 151 EVPSITAKANWALQYTQTLSSPSF 174
            +P +T KA WAL++    SS SF
Sbjct: 133 TIPCVTRKAEWALKWID--SSGSF 154


>gi|207343947|gb|EDZ71248.1| YJL026Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 399

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 73/147 (49%), Gaps = 5/147 (3%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +LN   +   L P+KY   W+ Y  A  + W   E+ +  D+  W   N + ++ER  I 
Sbjct: 78  LLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWN--NRMNENERFFIS 135

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
           R L FFA+S+S+V  N+V      +  PE + +   Q   E +HS T+  +I +   D  
Sbjct: 136 RVLAFFAASDSIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDPK 195

Query: 144 E---LFNMYREVPSITAKANWALQYTQ 167
           E   LFN    +P I  KA WAL++ Q
Sbjct: 196 ESEFLFNAIHTIPEIGEKAEWALRWIQ 222


>gi|332045030|gb|EGI81223.1| Ribonucleoside-diphosphate reductase [Lacinutrix algicola 5H-3-7-4]
          Length = 327

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 76/154 (49%), Gaps = 8/154 (5%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +L    D   + P+++   WE Y  +  + W   E+ +  DL  W SK  LTDDER  IK
Sbjct: 8   ILQENKDRFVIFPIQHHDLWEWYKKSEASMWTAEEIDLHQDLTDWSSK--LTDDERYFIK 65

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
             L FFA+S+ +V  N+       +   E + +   Q   E +HS T+  +I +   DE 
Sbjct: 66  HVLAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDEK 125

Query: 144 E---LFNMYREVPSITAKANWALQYTQTLSSPSF 174
           E   LFN     P+I  KA WAL++   + SPSF
Sbjct: 126 EKAMLFNAIETFPAIKKKAEWALKW---IESPSF 156


>gi|194363985|ref|YP_002026595.1| Ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia
           R551-3]
 gi|194346789|gb|ACF49912.1| Ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia
           R551-3]
          Length = 339

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 80/141 (56%), Gaps = 5/141 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   ++ Y +A  N W   E+  Q D++   SK  ++  ER +I R + FFA+ +
Sbjct: 18  LRPMRYPQFYDMYRNAIKNTWTVEEINFQIDISDLHSK--MSPGERHLIHRLVAFFATGD 75

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
           S+V+NN+VL +Y+HL+ PE R YL RQ +EEA+H   +  ++ +   D  E    F    
Sbjct: 76  SIVSNNLVLNLYQHLNAPEARMYLSRQLYEEALHVQFYLTLLDNYLPDPDERVKAFAAVE 135

Query: 151 EVPSITAKANWALQYTQTLSS 171
            + SI  KA++  ++  ++ +
Sbjct: 136 NIDSIKKKADFCFKWIDSIQN 156


>gi|256421019|ref|YP_003121672.1| ribonucleoside-diphosphate reductase [Chitinophaga pinensis DSM
           2588]
 gi|256035927|gb|ACU59471.1| Ribonucleoside-diphosphate reductase [Chitinophaga pinensis DSM
           2588]
          Length = 323

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 6/154 (3%)

Query: 17  VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           +N++++ +L    D   LLP+ Y   WEKY     + W   E+ +  D+  W   N L D
Sbjct: 1   MNLENELLLKENKDRFVLLPINYPKVWEKYKQHEASFWTAEEIDLSADMKDW---NNLND 57

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
            ER  I   L FFA+S+ +V  N+ +     +  PE R +   Q   E +HS T+  +I 
Sbjct: 58  GERHFITHVLAFFAASDGIVNENLAVNFMSEVQLPEARCFYGFQIMMENIHSETYALLID 117

Query: 137 SLGLDEGE---LFNMYREVPSITAKANWALQYTQ 167
           +   D  E   LF+    VP++T KA WAL++ +
Sbjct: 118 TYVKDPVEKDRLFHAIETVPAVTKKAKWALRWIE 151


>gi|168031987|ref|XP_001768501.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162680214|gb|EDQ66652.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 331

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 71/141 (50%), Gaps = 6/141 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+KY   WE Y  A  + W   EV +  D   W++   LTDDER  I   L FFA+S+
Sbjct: 20  MFPIKYPQVWEMYKKAEASFWTAEEVDLSADSKHWET---LTDDERHFISHVLAFFAASD 76

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+ +   + +  PE R +   Q   E +HS  +  ++ +   D+ E   LFN   
Sbjct: 77  GIVLENLAVRFMKEIQIPEARAFYGFQIAIENIHSEMYSLLLEAYIKDQAEKSRLFNAIE 136

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +P +  KA+WAL++  +  S
Sbjct: 137 TIPCVARKADWALKWIDSAGS 157


>gi|156058956|ref|XP_001595401.1| hypothetical protein SS1G_03490 [Sclerotinia sclerotiorum 1980]
 gi|154701277|gb|EDO01016.1| hypothetical protein SS1G_03490 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 407

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 13/169 (7%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           G+ P +A E  +  +  R +        L P+KY   W+ Y  A  + W   E+ +  DL
Sbjct: 63  GIKPEEADEPLLQENPNRFV--------LFPIKYHEIWQMYKKAEASFWTAEEIDLSKDL 114

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             W   N L DDER  I   L FFA+S+ +V  N+V      +  PE R +   Q   E 
Sbjct: 115 HDWN--NRLNDDERYFISHVLAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMEN 172

Query: 126 VHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           +HS T+  +I +   ++ +   LFN    +P I  KA+WA+++ Q  +S
Sbjct: 173 IHSETYSLLIDTYIKEQAQKTYLFNAIDTIPCIKKKADWAVKWIQDKNS 221


>gi|150863757|ref|XP_001382334.2| small subunit of ribonucleotide reductase [Scheffersomyces stipitis
           CBS 6054]
 gi|149385013|gb|ABN64305.2| small subunit of ribonucleotide reductase [Scheffersomyces stipitis
           CBS 6054]
          Length = 417

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 68/135 (50%), Gaps = 5/135 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W+ Y  A  + W   E+ +  D+  W   N L D+ER  I R L FFA+S+
Sbjct: 103 LFPIKYNEVWQMYKKAEASFWTAEEIDLSKDITDWN--NRLNDNERFFISRILAFFAASD 160

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +  PE + +   Q   E +HS T+  +I S   D  E   LFN   
Sbjct: 161 GIVNENLVENFSAEVQIPEAKCFYGFQIMMENIHSETYSLLIDSYIKDPKEADFLFNAID 220

Query: 151 EVPSITAKANWALQY 165
            +P I  KA+WAL++
Sbjct: 221 NIPCIRKKADWALRW 235


>gi|323337103|gb|EGA78359.1| Rnr2p [Saccharomyces cerevisiae Vin13]
          Length = 296

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 5/147 (3%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +LN   +   L P+KY   W+ Y  A  + W   E+ +  D+  W   N + ++ER  I 
Sbjct: 78  LLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWN--NRMNENERFFIS 135

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
           R L FFA+S+ +V  N+V      +  PE + +   Q   E +HS T+  +I +   D  
Sbjct: 136 RVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDPK 195

Query: 144 E---LFNMYREVPSITAKANWALQYTQ 167
           E   LFN    +P I  KA WAL++ Q
Sbjct: 196 ESEFLFNAIHTIPEIGEKAEWALRWIQ 222


>gi|289620013|emb|CBI53457.1| unnamed protein product [Sordaria macrospora]
          Length = 410

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 80/168 (47%), Gaps = 13/168 (7%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           L P +A E  +  + +R +        L P+KY   W+ Y  A  + W   E+ +  DL 
Sbjct: 70  LKPEEAAEPLLTENPQRFV--------LFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLH 121

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            W   N LTDDER  +   L FFA+S+ +V  N+V      +  PE R +   Q   E +
Sbjct: 122 DWN--NRLTDDERFFVSHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENI 179

Query: 127 HSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           HS T+  +I +   +  +   LFN    +P I  KA+WAL++    SS
Sbjct: 180 HSETYSLLIDTYIKEPSQRTYLFNAIDTIPCIRKKADWALRWITDKSS 227


>gi|255724184|ref|XP_002547021.1| hypothetical protein CTRG_01327 [Candida tropicalis MYA-3404]
 gi|240134912|gb|EER34466.1| hypothetical protein CTRG_01327 [Candida tropicalis MYA-3404]
          Length = 252

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 5/137 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+KY   W  Y  A  + W   EV +  DL  W   N L D+ER  + R L FFA+S+
Sbjct: 102 MFPIKYHEIWNFYKKAEASFWTCEEVDLSKDLDDWN--NKLNDNERYFVSRVLAFFAASD 159

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N++      + +PE + +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 160 GIVGENLIENFSAEVQSPEAKSFYGFQIMMENIHSEMYSLLIETYVKDPQEADFLFNAIE 219

Query: 151 EVPSITAKANWALQYTQ 167
            +P IT KA WA+++ Q
Sbjct: 220 NIPCITKKAEWAIKWIQ 236


>gi|323304329|gb|EGA58102.1| Rnr2p [Saccharomyces cerevisiae FostersB]
          Length = 229

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 5/147 (3%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +LN   +   L P+KY   W+ Y  A  + W   E+ +  D+  W   N + ++ER  I 
Sbjct: 78  LLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWN--NRMNENERFFIS 135

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
           R L FFA+S+ +V  N+V      +  PE + +   Q   E +HS T+  +I +   D  
Sbjct: 136 RVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDPK 195

Query: 144 E---LFNMYREVPSITAKANWALQYTQ 167
           E   LFN    +P I  KA WAL++ Q
Sbjct: 196 ESEFLFNAIHTIPEIGEKAEWALRWIQ 222


>gi|323333040|gb|EGA74442.1| Rnr2p [Saccharomyces cerevisiae AWRI796]
          Length = 306

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 5/147 (3%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +LN   +   L P+KY   W+ Y  A  + W   E+ +  D+  W   N + ++ER  I 
Sbjct: 78  LLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWN--NRMNENERFFIS 135

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
           R L FFA+S+ +V  N+V      +  PE + +   Q   E +HS T+  +I +   D  
Sbjct: 136 RVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDPK 195

Query: 144 E---LFNMYREVPSITAKANWALQYTQ 167
           E   LFN    +P I  KA WAL++ Q
Sbjct: 196 ESEFLFNAIHTIPEIGEKAEWALRWIQ 222


>gi|323354474|gb|EGA86313.1| Rnr2p [Saccharomyces cerevisiae VL3]
          Length = 306

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 5/147 (3%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +LN   +   L P+KY   W+ Y  A  + W   E+ +  D+  W   N + ++ER  I 
Sbjct: 78  LLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWN--NRMNENERFFIS 135

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
           R L FFA+S+ +V  N+V      +  PE + +   Q   E +HS T+  +I +   D  
Sbjct: 136 RVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDPK 195

Query: 144 E---LFNMYREVPSITAKANWALQYTQ 167
           E   LFN    +P I  KA WAL++ Q
Sbjct: 196 ESEFLFNAIHTIPEIGEKAEWALRWIQ 222


>gi|155370982|ref|YP_001426516.1| hypothetical protein ATCV1_Z035L [Acanthocystis turfacea Chlorella
           virus 1]
 gi|155124302|gb|ABT16169.1| hypothetical protein ATCV1_Z035L [Acanthocystis turfacea Chlorella
           virus 1]
          Length = 325

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 5/134 (3%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
            P++Y   ++ Y  A    W   EV +  D+  W+ K  L DDER  IK  LGFFA S+ 
Sbjct: 20  FPIRYPDIFQMYKKAVATFWTVEEVQLNQDVVDWREK--LNDDERHFIKHILGFFAGSDG 77

Query: 95  LVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYRE 151
           +V  N+       +++P  R +   Q + E+VHS  +  ++ +L  DE E   LF     
Sbjct: 78  MVMENLNNNFAEEVTDPSARMFYAYQGYNESVHSEQYSLLLDALIEDETERNKLFEAIET 137

Query: 152 VPSITAKANWALQY 165
           +P++  KA WA +Y
Sbjct: 138 IPAVGKKAAWASKY 151


>gi|6322434|ref|NP_012508.1| Rnr2p [Saccharomyces cerevisiae S288c]
 gi|1172946|sp|P09938|RIR2_YEAST RecName: Full=Ribonucleoside-diphosphate reductase small chain 1;
           AltName: Full=Ribonucleotide reductase R2 subunit 1;
           AltName: Full=Ribonucleotide reductase small subunit 1
 gi|52695523|pdb|1SMQ|A Chain A, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
           From Saccharomyces Cerevisiae
 gi|52695524|pdb|1SMQ|B Chain B, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
           From Saccharomyces Cerevisiae
 gi|52695525|pdb|1SMQ|C Chain C, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
           From Saccharomyces Cerevisiae
 gi|52695526|pdb|1SMQ|D Chain D, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
           From Saccharomyces Cerevisiae
 gi|172450|gb|AAA34988.1| ribonucleoside diphosphate reductase small subunit [Saccharomyces
           cerevisiae]
 gi|1008142|emb|CAA89317.1| RNR2 [Saccharomyces cerevisiae]
 gi|285812874|tpg|DAA08772.1| TPA: Rnr2p [Saccharomyces cerevisiae S288c]
          Length = 399

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 5/147 (3%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +LN   +   L P+KY   W+ Y  A  + W   E+ +  D+  W   N + ++ER  I 
Sbjct: 78  LLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWN--NRMNENERFFIS 135

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
           R L FFA+S+ +V  N+V      +  PE + +   Q   E +HS T+  +I +   D  
Sbjct: 136 RVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDPK 195

Query: 144 E---LFNMYREVPSITAKANWALQYTQ 167
           E   LFN    +P I  KA WAL++ Q
Sbjct: 196 ESEFLFNAIHTIPEIGEKAEWALRWIQ 222


>gi|290771185|emb|CAY80753.2| Rnr2p [Saccharomyces cerevisiae EC1118]
          Length = 399

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 5/147 (3%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +LN   +   L P+KY   W+ Y  A  + W   E+ +  D+  W   N + ++ER  I 
Sbjct: 78  LLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWN--NRMNENERFFIS 135

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
           R L FFA+S+ +V  N+V      +  PE + +   Q   E +HS T+  +I +   D  
Sbjct: 136 RVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDPK 195

Query: 144 E---LFNMYREVPSITAKANWALQYTQ 167
           E   LFN    +P I  KA WAL++ Q
Sbjct: 196 ESEFLFNAIHTIPEIGEKAEWALRWIQ 222


>gi|151945057|gb|EDN63308.1| ribonucleotide reductase subunit [Saccharomyces cerevisiae YJM789]
 gi|190409471|gb|EDV12736.1| ribonucleotide reductase subunit [Saccharomyces cerevisiae RM11-1a]
 gi|256271075|gb|EEU06176.1| Rnr2p [Saccharomyces cerevisiae JAY291]
          Length = 399

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 5/147 (3%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +LN   +   L P+KY   W+ Y  A  + W   E+ +  D+  W   N + ++ER  I 
Sbjct: 78  LLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWN--NRMNENERFFIS 135

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
           R L FFA+S+ +V  N+V      +  PE + +   Q   E +HS T+  +I +   D  
Sbjct: 136 RVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDPK 195

Query: 144 E---LFNMYREVPSITAKANWALQYTQ 167
           E   LFN    +P I  KA WAL++ Q
Sbjct: 196 ESEFLFNAIHTIPEIGEKAEWALRWIQ 222


>gi|323347997|gb|EGA82256.1| Rnr2p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 399

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 5/147 (3%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +LN   +   L P+KY   W+ Y  A  + W   E+ +  D+  W   N + ++ER  I 
Sbjct: 78  LLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWN--NRMNENERFFIS 135

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
           R L FFA+S+ +V  N+V      +  PE + +   Q   E +HS T+  +I +   D  
Sbjct: 136 RVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDPK 195

Query: 144 E---LFNMYREVPSITAKANWALQYTQ 167
           E   LFN    +P I  KA WAL++ Q
Sbjct: 196 ESEFLFNAIHTIPEIGEKAEWALRWIQ 222


>gi|311743885|ref|ZP_07717691.1| ribonucleotide-diphosphate reductase beta subunit [Aeromicrobium
           marinum DSM 15272]
 gi|311313015|gb|EFQ82926.1| ribonucleotide-diphosphate reductase beta subunit [Aeromicrobium
           marinum DSM 15272]
          Length = 357

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 77/141 (54%), Gaps = 3/141 (2%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+ Y WA E Y  A  N W P E+ + +DLA ++    ++D+ER  +   + +F  +E
Sbjct: 45  LKPVTYPWAMELYDQAVANTWFPNEIQLGEDLADFER---MSDEERHALTFLMSYFNPNE 101

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVP 153
            LV   +   +Y +++  EC  YL +Q +EEA H  +F+Y++ +  +D    +  +  VP
Sbjct: 102 LLVNKALAFGVYPYVNAAECHLYLAKQMWEEANHCMSFEYVLETFPIDREAAYGSHVTVP 161

Query: 154 SITAKANWALQYTQTLSSPSF 174
           S+ AK  + +++ + ++  + 
Sbjct: 162 SMAAKEEFEIRFIRRMTEQTL 182


>gi|15826569|pdb|1JK0|A Chain A, Ribonucleotide Reductase Y2y4 Heterodimer
          Length = 419

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 5/147 (3%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +LN   +   L P+KY   W+ Y  A  + W   E+ +  D+  W   N + ++ER  I 
Sbjct: 98  LLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWN--NRMNENERFFIS 155

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
           R L FFA+S+ +V  N+V      +  PE + +   Q   E +HS T+  +I +   D  
Sbjct: 156 RVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDPK 215

Query: 144 E---LFNMYREVPSITAKANWALQYTQ 167
           E   LFN    +P I  KA WAL++ Q
Sbjct: 216 ESEFLFNAIHTIPEIGEKAEWALRWIQ 242


>gi|323308423|gb|EGA61668.1| Rnr2p [Saccharomyces cerevisiae FostersO]
          Length = 399

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 72/147 (48%), Gaps = 5/147 (3%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +LN   +   L P+KY   W+ Y  A  + W   E+ +  D+  W   N + ++ER  I 
Sbjct: 78  LLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWN--NRMNENERFFIS 135

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
           R L FFA+S+ +V  N+V      +  PE + +   Q   E +HS T+  +I +   D  
Sbjct: 136 RVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDPK 195

Query: 144 E---LFNMYREVPSITAKANWALQYTQ 167
           E   LFN    +P I  KA WAL++ Q
Sbjct: 196 ESEFLFNAIHTIPEIGEKAEWALRWIQ 222


>gi|328771482|gb|EGF81522.1| hypothetical protein BATDEDRAFT_16297 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 336

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 78/160 (48%), Gaps = 5/160 (3%)

Query: 9   PIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           P++   +   V ++ +L      + L P+KY   W  Y  A  + W   EV +  D   W
Sbjct: 2   PLELPSESTLVQNEPILTPDPRRSVLFPIKYPAVWRMYKKAEASFWTAEEVDLSKDTLDW 61

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           + +  LTDDER  I R L FFA+S+ +V  N+V    + +  PE R +   Q   E +HS
Sbjct: 62  EER--LTDDERYFISRVLAFFAASDGIVNENLVERFSQDVHIPEARYFYDFQIMIENIHS 119

Query: 129 HTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
             +  +I +   D  E   LF+    VP I  KA+WAL++
Sbjct: 120 EMYSLLIDTYIKDRKERAFLFDAIDTVPCIRKKADWALRW 159


>gi|154296564|ref|XP_001548712.1| ribonucleotide reductase small subunit [Botryotinia fuckeliana
           B05.10]
 gi|150843273|gb|EDN18466.1| ribonucleotide reductase small subunit [Botryotinia fuckeliana
           B05.10]
          Length = 407

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 13/169 (7%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           G+ P +A E  +  +  R +        L P+KY   W+ Y  A  + W   E+ +  DL
Sbjct: 63  GIKPEEADEPLLQENPNRFV--------LFPIKYHEIWQMYKKAEASFWTAEEIDLSKDL 114

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             W  +  L DDER  I   L FFA+S+ +V  N+V      +  PE R +   Q   E 
Sbjct: 115 HDWNER--LNDDERYFISHVLAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMEN 172

Query: 126 VHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           +HS T+  +I +   ++ +   LFN    +P I  KA+WA+++ Q  +S
Sbjct: 173 IHSETYSLLIDTYIKEQSQKTYLFNAIDTIPCIKKKADWAVKWIQDKNS 221


>gi|50286273|ref|XP_445565.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524870|emb|CAG58476.1| unnamed protein product [Candida glabrata]
          Length = 400

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 72/148 (48%), Gaps = 5/148 (3%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           D+ +LN   D   L P+KY   W+ Y  A  + W   E+ +  DL  W   N L ++ER 
Sbjct: 75  DEPLLNDDPDRLTLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDLHDWN--NRLNENERF 132

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I R L FFA+S+ +V  N+V         PE + +   Q   E +HS T+  +I +   
Sbjct: 133 FISRVLAFFAASDGIVNENLVENFSTEAVIPEAKAFYGFQIMIENIHSETYSLLIDTYIK 192

Query: 141 DEGE---LFNMYREVPSITAKANWALQY 165
           D  E   LFN    +P I  KA WAL++
Sbjct: 193 DPKESEFLFNAIHTIPEIGEKAEWALRW 220


>gi|254521240|ref|ZP_05133295.1| ribonucleoside-diphosphate reductase, beta subunit
           [Stenotrophomonas sp. SKA14]
 gi|219718831|gb|EED37356.1| ribonucleoside-diphosphate reductase, beta subunit
           [Stenotrophomonas sp. SKA14]
          Length = 339

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 78/141 (55%), Gaps = 5/141 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   ++ Y +A  N W   E+  Q D+    SK  ++  ER +I R + FFA+ +
Sbjct: 18  LRPMRYPQFYDMYRNAIKNTWTVEEINFQIDITDLHSK--MSPGERHLIHRLVAFFATGD 75

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
           S+V+NN+VL +Y+HL+ PE R YL RQ +EEA+H   +  ++ +   D  E    F    
Sbjct: 76  SIVSNNLVLNLYQHLNAPEARMYLSRQLYEEALHVQFYLTLLDNYLPDPEERVKAFAAVE 135

Query: 151 EVPSITAKANWALQYTQTLSS 171
            + SI  KA++  ++  ++  
Sbjct: 136 NIDSIKKKADFCFKWIDSIQD 156


>gi|168015485|ref|XP_001760281.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162688661|gb|EDQ75037.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 330

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 70/141 (49%), Gaps = 6/141 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+KY   WE Y  A  + W   EV +  D   W++   LTD+ER  I   L FFA+S+
Sbjct: 19  MFPIKYPQVWEMYKKAEASFWTAEEVDLSADSKHWEA---LTDNERHFISHVLAFFAASD 75

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+ +   + +  PE R +   Q   E +HS  +  ++ +   D  E   LFN   
Sbjct: 76  GIVLENLAIRFMKEIQIPEARAFYGFQIAIENIHSEMYSLLLEAYIKDHAEKNRLFNAIE 135

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +P +T KA WAL++  +  S
Sbjct: 136 TIPCVTKKAEWALKWIHSAGS 156


>gi|189199548|ref|XP_001936111.1| ribonucleoside-diphosphate reductase subunit M2 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187983210|gb|EDU48698.1| ribonucleoside-diphosphate reductase subunit M2 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 410

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 78/167 (46%), Gaps = 5/167 (2%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           A++  + P  A   +    D+ +L        L P+KY   W+ Y  A  + W   E+ +
Sbjct: 52  ADDEEVKPTVAPTIKPEEADEPLLQENPGRFVLFPIKYHDVWQMYKKAEASFWTAEEIDL 111

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             DL  W  +  L DDER  I   L FFA+S+ +V  N+V      +  PE R +   Q 
Sbjct: 112 SKDLHDWNKR--LNDDERFFISHVLAFFAASDGIVNENLVERFSSEVQIPEARCFYGFQI 169

Query: 122 FEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
             E VHS T+  +I +   D  +   LFN    +P I  KA+WAL++
Sbjct: 170 MMENVHSETYSLLIDTYISDTRQRKYLFNAIENIPCIRKKADWALRW 216


>gi|303278144|ref|XP_003058365.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226459525|gb|EEH56820.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 338

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 76/151 (50%), Gaps = 8/151 (5%)

Query: 27  ARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNL 86
           A S+   + P+KYG  WE Y  A  + W   EV + DD+  W+    L+DDE+  I   L
Sbjct: 20  AGSERFTMFPIKYGDIWEMYKKAEASFWTAEEVDLSDDMKHWEK---LSDDEKHFISHIL 76

Query: 87  GFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE-- 144
            FFA+S+ +V  N+ +     +  PE R +   Q   E +HS  +  +I +   D  +  
Sbjct: 77  AFFAASDGIVLENLGVRFMGEVQIPEARAFYGFQIAIENIHSEMYSLLIDAYIKDAAQKK 136

Query: 145 -LFNMYREVPSITAKANWALQYTQTLSSPSF 174
            LF     +P +  KA+WAL++ +  SS +F
Sbjct: 137 YLFEAMENIPCVAKKADWALKWIE--SSATF 165


>gi|118383611|ref|XP_001024960.1| ribonucleoside-diphosphate reductase, beta subunit family protein
           [Tetrahymena thermophila]
 gi|89306727|gb|EAS04715.1| ribonucleoside-diphosphate reductase, beta subunit family protein
           [Tetrahymena thermophila SB210]
          Length = 376

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 79/166 (47%), Gaps = 12/166 (7%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           N+ G +P +  E      D+ +L    +   L P+KY   WE Y     + W   E+ + 
Sbjct: 45  NDEGKAPKEGYE------DEPLLKDNPNRFVLFPIKYNKVWEMYKKELASFWTADEIDLY 98

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            DL  W+    LTD+ER  IK  L FFA+S+ +V  N+       +  PE R +   Q  
Sbjct: 99  QDLKDWER---LTDNERHFIKYVLAFFAASDGIVLENLAEQFMCEVQIPEARAFYGFQIA 155

Query: 123 EEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
            E +HS T+  +I +   DE E   LF   + VP I  KA WAL++
Sbjct: 156 MENIHSETYSLLIDTYIKDEVEKDYLFKASQNVPVIHKKAQWALKW 201


>gi|50311465|ref|XP_455757.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644893|emb|CAG98465.1| KLLA0F15103p [Kluyveromyces lactis]
          Length = 401

 Score = 81.3 bits (199), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 5/137 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   WE Y  A  + W   E+ +  DL  W   N + ++ER  I R L FFA+S+
Sbjct: 88  LFPIKYHEIWEAYKRAEASFWTAEEIDLSKDLHDWN--NRMNENERFFISRILAFFAASD 145

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +  PE + +   Q   E +HS T+  +I +   D  E   LFN   
Sbjct: 146 GIVNENLVENFSAEVQAPEAKCFYGFQIMMENIHSETYSLLIDTYIKDPKESEFLFNAIE 205

Query: 151 EVPSITAKANWALQYTQ 167
            +P I  KA WA+++ Q
Sbjct: 206 TIPQIKEKAEWAIRWIQ 222


>gi|168702494|ref|ZP_02734771.1| ribonucleoside-diphosphate reductase, beta subunit [Gemmata
           obscuriglobus UQM 2246]
          Length = 332

 Score = 80.9 bits (198), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 76/141 (53%), Gaps = 5/141 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   +E Y  A  N W   EV    DLA  + +  +T  ER +I R + FFA+ +
Sbjct: 11  LRPMRYPPFFEMYKDAIKNTWTVDEVDFSTDLADLRGR--VTPAERHLIHRLVAFFATGD 68

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV- 152
           S+V NN+VL +Y+H++ PE R YL RQ +EEA+H   +  ++ +   D       +  V 
Sbjct: 69  SIVGNNLVLNLYKHVNAPEARMYLSRQLYEEALHVQFYLTLLDNYLPDMAAREAAFAAVD 128

Query: 153 --PSITAKANWALQYTQTLSS 171
             PSI  KA++  ++  ++  
Sbjct: 129 NIPSIKLKADFCFKWIDSIEG 149


>gi|66822029|ref|XP_644369.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
           AX4]
 gi|66823381|ref|XP_645045.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
           AX4]
 gi|41019487|sp|P42521|RIR2_DICDI RecName: Full=Ribonucleoside-diphosphate reductase small subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|29611978|gb|AAB72227.2| ribonucleotide reductase small subunit [Dictyostelium discoideum]
 gi|60472492|gb|EAL70444.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
           AX4]
 gi|60472997|gb|EAL70945.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
           AX4]
          Length = 338

 Score = 80.9 bits (198), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 5/145 (3%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +L    D   L P+KY   W  Y  A  +HW+  E+ + +D   W+ K  LTD+ER  I 
Sbjct: 14  ILKENKDRFVLFPIKYPDIWRMYKKALASHWVAEEIDLGNDNVDWEYK--LTDNERHFIS 71

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD-- 141
             L FFA+S+ +V  N+       +  PE R +   Q   E +HS T+  +I +   D  
Sbjct: 72  HVLAFFAASDGIVNENLATRFMSEVQIPEARCFYGFQIAIENIHSETYSLLIETYIKDKQ 131

Query: 142 -EGELFNMYREVPSITAKANWALQY 165
            + +LFN    +P I  KA WAL++
Sbjct: 132 TKDKLFNAIETIPCIKKKAEWALRW 156


>gi|313836278|gb|EFS73992.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL037PA2]
 gi|314928743|gb|EFS92574.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL044PA1]
 gi|314971220|gb|EFT15318.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL037PA3]
 gi|328906508|gb|EGG26283.1| ribonucleotide-diphosphate reductase subunit beta
           [Propionibacterium sp. P08]
          Length = 324

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 74/141 (52%), Gaps = 3/141 (2%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+ Y WA++ Y  A  N W P EV + +DLA +     +T DE   +   + +F  +E
Sbjct: 13  LKPVTYPWAYDLYNQAVANTWFPNEVQLDEDLADFAR---MTPDEHHALTHLMSYFNPNE 69

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVP 153
            LV   +   +Y +++  EC  YL +Q +EEA H   F+Y++ +  +D  E +  +  VP
Sbjct: 70  LLVNKALAFGVYPYVNAAECHLYLAKQMWEEANHCMAFEYVLETFPIDRDEAYRSHIHVP 129

Query: 154 SITAKANWALQYTQTLSSPSF 174
           S+  K  + +++ + ++  + 
Sbjct: 130 SMARKEAFEVEFIKRVTEQTL 150


>gi|302843870|ref|XP_002953476.1| hypothetical protein VOLCADRAFT_109884 [Volvox carteri f.
           nagariensis]
 gi|300261235|gb|EFJ45449.1| hypothetical protein VOLCADRAFT_109884 [Volvox carteri f.
           nagariensis]
          Length = 400

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 6/155 (3%)

Query: 20  DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER 79
           D + +L+   D   + P+KY   WE Y  A  + W   EV + DD+  W+    L+D ER
Sbjct: 78  DPEPLLDENPDRFCMFPIKYPKIWEMYKKAEASFWTAEEVDLGDDMKHWEK---LSDGER 134

Query: 80  LMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
             I   L FFA+S+ +V  N+ +   + +  PE R +   Q   E +HS  +  ++ +  
Sbjct: 135 HFISHVLAFFAASDGIVLENLAIRFMKEVQLPEARAFYGFQVAIENIHSEMYSLLLETYI 194

Query: 140 LDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
            D  E   LF+    VP I  KA WA+++  + SS
Sbjct: 195 KDPIEKHKLFHSIETVPCIKKKAQWAIKWIGSESS 229


>gi|298207002|ref|YP_003715181.1| probable ribonucleoside-diphosphate reductase small chain
           [Croceibacter atlanticus HTCC2559]
 gi|83849636|gb|EAP87504.1| probable ribonucleoside-diphosphate reductase small chain
           [Croceibacter atlanticus HTCC2559]
          Length = 325

 Score = 80.9 bits (198), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 73/142 (51%), Gaps = 9/142 (6%)

Query: 34  LLPLKYG--WAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFAS 91
           + P+++   W W K + AC   W   E+ +  DL  W SK  L DDER  IK  L FFA+
Sbjct: 17  IFPIQHNDIWEWYKKMEAC--FWTAEEIDLHQDLTDWNSK--LNDDERYFIKHILAFFAA 72

Query: 92  SESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYRE 151
           S+ +V  N+       +   E + +   Q   E +HS T+  +I +   DE E   ++R 
Sbjct: 73  SDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDEAEKDQLFRA 132

Query: 152 V---PSITAKANWALQYTQTLS 170
           +   P+I  KA+WAL++ ++ S
Sbjct: 133 IEVFPAIKKKADWALKWIESDS 154


>gi|196233679|ref|ZP_03132520.1| Ribonucleoside-diphosphate reductase [Chthoniobacter flavus
           Ellin428]
 gi|196222349|gb|EDY16878.1| Ribonucleoside-diphosphate reductase [Chthoniobacter flavus
           Ellin428]
          Length = 390

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 2/150 (1%)

Query: 10  IQAGEKRVNVDDKRMLNA-RSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           +   + R  +  KR++N  RS    +LPLKY  A+  Y     NHW P  + M  D   W
Sbjct: 43  LDKAKARARLAGKRVINGLRSAELNVLPLKYHEAYRIYKQMKANHWEPDVIDMTRDSQQW 102

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
            +   L+  ER +I+  +G+F+++E +V ++++  I  +L+  E +   LR   EE++H 
Sbjct: 103 NT-GALSPKERWIIEMGVGYFSAAEGIVGDSVLHVIEDNLTAAELKHASLRHIAEESIHM 161

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAK 158
            +  +II SL +D  E+   + ++PS+  K
Sbjct: 162 DSLLHIIGSLNIDLDEVTAKFSDIPSVQRK 191


>gi|254586079|ref|XP_002498607.1| ZYRO0G14388p [Zygosaccharomyces rouxii]
 gi|238941501|emb|CAR29674.1| ZYRO0G14388p [Zygosaccharomyces rouxii]
          Length = 412

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 69/137 (50%), Gaps = 5/137 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W+ Y  A  + W   E+ +  DL  W +K  +++ ER  I R L FFA+S+
Sbjct: 101 LFPIKYHEIWQAYKRAEASFWTAEEIDLSKDLDDWNNK--MSEGERYFISRVLAFFAASD 158

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +  PE + +   Q   E +HS T+  +I +   D  E   LFN   
Sbjct: 159 GIVNENLVENFSAEVQIPEAKCFYGFQIMMENIHSETYSLLIDTYSRDTEESEFLFNAIE 218

Query: 151 EVPSITAKANWALQYTQ 167
            +P I  KA WA+++ Q
Sbjct: 219 NIPPIKEKAEWAIRWIQ 235


>gi|171687074|ref|XP_001908478.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943498|emb|CAP69151.1| unnamed protein product [Podospora anserina S mat+]
          Length = 409

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 5/162 (3%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           +  + A E +  + D+ +L        L P+KY   W+ Y  A  + W   E+ +  DL 
Sbjct: 61  IKTVAAPEPKQELLDEPLLTENPQRFVLFPIKYHEVWQMYKKAEASFWTAEEIDLSKDLH 120

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            W +K  L DDE+  I   L FFA+S+ +V  N+V      +  PE R +   Q   E +
Sbjct: 121 DWSNK--LNDDEKFFISHILAFFAASDGIVNENLVERFSAEVQIPEARCFYGFQIMMENI 178

Query: 127 HSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
           HS T+  +I +   +  +   LFN    +P I  KA+WAL++
Sbjct: 179 HSETYSLLIDTYIKEPSQRTYLFNAIDTIPCIRKKADWALRW 220


>gi|321263951|ref|XP_003196693.1| ribonucleotide reductase small subunit [Cryptococcus gattii WM276]
 gi|317463170|gb|ADV24906.1| Ribonucleotide reductase small subunit, putative [Cryptococcus
           gattii WM276]
          Length = 430

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 66/135 (48%), Gaps = 5/135 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W+ Y  A  + W   E+    DL  W  +  +T+ ER  I R L FFA+S+
Sbjct: 112 LFPIKYNEIWQAYKRAQASFWTAEELDFGHDLIDWHDR--MTEQERFFILRILAFFAASD 169

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  NIV      +   E R +   Q+  E VHS T+  +I +   D  E   LF    
Sbjct: 170 GIVGENIVSQFSLEVQIAEARAFYSFQSMIEQVHSETYSLLIETYVRDAQEKDFLFRGME 229

Query: 151 EVPSITAKANWALQY 165
            +P I  KA+WAL+Y
Sbjct: 230 NIPCIKQKADWALKY 244


>gi|58260834|ref|XP_567827.1| ribonucleotide reductase small subunit [Cryptococcus neoformans
           var. neoformans JEC21]
 gi|134117207|ref|XP_772830.1| hypothetical protein CNBK2010 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255448|gb|EAL18183.1| hypothetical protein CNBK2010 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229908|gb|AAW46310.1| ribonucleotide reductase small subunit, putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 430

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 66/135 (48%), Gaps = 5/135 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W+ Y  A  + W   E+    DL  W  +  +T+ ER  I R L FFA+S+
Sbjct: 112 LFPIKYNEIWQAYKHAQASFWTAEELDFGHDLIDWHDR--MTEQERFFILRILAFFAASD 169

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  NIV      +   E R +   Q+  E VHS T+  +I +   D  E   LF    
Sbjct: 170 GIVGENIVSQFALEVQIAEARAFYSFQSMIEQVHSETYSLLIETYVRDAQEKDFLFRGMT 229

Query: 151 EVPSITAKANWALQY 165
            +P I  KA+WAL+Y
Sbjct: 230 NIPCIKQKADWALKY 244


>gi|45184688|ref|NP_982406.1| AAL136Cp [Ashbya gossypii ATCC 10895]
 gi|44980034|gb|AAS50230.1| AAL136Cp [Ashbya gossypii ATCC 10895]
          Length = 422

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 69/137 (50%), Gaps = 5/137 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W+ Y  A  + W   E+ +  D+  W   N +T++ER  I R L FFA+S+
Sbjct: 109 LFPIKYHDIWQAYKRAEASFWTAEEIDLSKDIHDWN--NRMTENERFFISRVLAFFAASD 166

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +  PE + +   Q   E +HS T+  +I +   D  E   LFN   
Sbjct: 167 GIVNENLVENFSAEVQIPEAKCFYGFQIMMENIHSETYSLLIDTYIKDPKEADHLFNAIE 226

Query: 151 EVPSITAKANWALQYTQ 167
            +P I  KA WA+++ Q
Sbjct: 227 TIPEIKEKAEWAIRWIQ 243


>gi|225873704|ref|YP_002755163.1| ribonucleoside-diphosphate reductase, beta subunit [Acidobacterium
           capsulatum ATCC 51196]
 gi|225791613|gb|ACO31703.1| ribonucleoside-diphosphate reductase, beta subunit [Acidobacterium
           capsulatum ATCC 51196]
          Length = 340

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 79/139 (56%), Gaps = 5/139 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   ++ +     N W   EV  Q DL   K +  L+  E  +I+R + FFA+ +
Sbjct: 19  LRPMRYPVFYDMFRDGIKNTWTVEEVDFQTDLVDLKQR--LSPAEVHLIQRLVAFFATGD 76

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD---EGELFNMYR 150
           S+V+NN+VL +Y+H+++PE R YL RQ +EEAVH   +  ++ +   D       F    
Sbjct: 77  SIVSNNLVLNLYKHINSPEARLYLSRQLYEEAVHVQFYLTLLDNYVPDPEARAAAFAAVE 136

Query: 151 EVPSITAKANWALQYTQTL 169
            +PSI+ KA++ +++  ++
Sbjct: 137 NIPSISKKADFCMKWMDSI 155


>gi|325286576|ref|YP_004262366.1| Ribonucleoside-diphosphate reductase [Cellulophaga lytica DSM 7489]
 gi|324322030|gb|ADY29495.1| Ribonucleoside-diphosphate reductase [Cellulophaga lytica DSM 7489]
          Length = 328

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 50/154 (32%), Positives = 76/154 (49%), Gaps = 8/154 (5%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +L    D   + P+K+   W+ Y     + W   E+ +  DL  WK+K  L DDER  IK
Sbjct: 8   ILEKNEDRFVIFPIKHNDLWDWYKKCEASFWTAEEIDLHADLDDWKNK--LNDDERYFIK 65

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
             L FFA+S+ +V  N+       +   E + +   Q   E +HS T+  +I +   DE 
Sbjct: 66  HILAFFAASDGIVNENLAENFVSEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKDEK 125

Query: 144 E---LFNMYREVPSITAKANWALQYTQTLSSPSF 174
           E   LF+     P+I  KA+WAL++ +   SPSF
Sbjct: 126 EKDILFHALENFPAIRKKADWALKWIE---SPSF 156


>gi|313793687|gb|EFS41718.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL110PA1]
 gi|327456018|gb|EGF02673.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL092PA1]
          Length = 328

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 73/141 (51%), Gaps = 3/141 (2%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+ Y WA++ Y  A  N W P E+ + +DLA +     +T DE   +   + +F  +E
Sbjct: 13  LKPVTYSWAYDLYNQAVANTWFPNEIQLDEDLADFAR---MTPDEHHALTHLMSYFNPNE 69

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVP 153
            LV   +   +Y +++  EC  YL +Q +EEA H   F+Y++ +  +D  E +  +  VP
Sbjct: 70  LLVNKALAFGVYPYVNAAECHLYLAKQMWEEANHCMAFEYVLETFPIDRDEAYRSHIHVP 129

Query: 154 SITAKANWALQYTQTLSSPSF 174
           S+  K  + + + + ++  + 
Sbjct: 130 SMARKEAFEVAFIKRMTEQTL 150


>gi|314918862|gb|EFS82693.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL050PA1]
 gi|314921071|gb|EFS84902.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL050PA3]
          Length = 328

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 73/141 (51%), Gaps = 3/141 (2%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+ Y WA++ Y  A  N W P E+ + +DLA +     +T DE   +   + +F  +E
Sbjct: 13  LKPVTYSWAYDLYNQAVANTWFPNEIQLDEDLADFAR---MTPDEHHALTHLMSYFNPNE 69

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVP 153
            LV   +   +Y +++  EC  YL +Q +EEA H   F+Y++ +  +D  E +  +  VP
Sbjct: 70  LLVNKALAFGVYPYVNAAECHLYLAKQMWEEANHCMAFEYVLETFPIDRDEAYRSHIHVP 129

Query: 154 SITAKANWALQYTQTLSSPSF 174
           S+  K  + + + + ++  + 
Sbjct: 130 SMARKEAFEVAFIKRMTEQTL 150


>gi|50843560|ref|YP_056787.1| ribonucleotide-diphosphate reductase subunit beta
           [Propionibacterium acnes KPA171202]
 gi|282854887|ref|ZP_06264221.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes J139]
 gi|289427904|ref|ZP_06429608.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes J165]
 gi|295131638|ref|YP_003582301.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes SK137]
 gi|50841162|gb|AAT83829.1| ribonucleoside-diphosphate reductase beta chain [Propionibacterium
           acnes KPA171202]
 gi|282582033|gb|EFB87416.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes J139]
 gi|289158787|gb|EFD06987.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes J165]
 gi|291376691|gb|ADE00546.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes SK137]
 gi|313771782|gb|EFS37748.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL074PA1]
 gi|313808408|gb|EFS46875.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL087PA2]
 gi|313810605|gb|EFS48319.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL083PA1]
 gi|313813765|gb|EFS51479.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL025PA1]
 gi|313818171|gb|EFS55885.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL046PA2]
 gi|313821029|gb|EFS58743.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL036PA1]
 gi|313823899|gb|EFS61613.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL036PA2]
 gi|313827161|gb|EFS64875.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL063PA1]
 gi|313831646|gb|EFS69360.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL007PA1]
 gi|313834800|gb|EFS72514.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL056PA1]
 gi|314924366|gb|EFS88197.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL001PA1]
 gi|314927054|gb|EFS90885.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL036PA3]
 gi|314961874|gb|EFT05975.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL002PA2]
 gi|314965892|gb|EFT09991.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL082PA2]
 gi|314974996|gb|EFT19091.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL053PA1]
 gi|314977908|gb|EFT22002.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL045PA1]
 gi|314979603|gb|EFT23697.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL072PA2]
 gi|314981613|gb|EFT25706.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL110PA3]
 gi|314984684|gb|EFT28776.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL005PA1]
 gi|314988338|gb|EFT32429.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL005PA2]
 gi|314990428|gb|EFT34519.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL005PA3]
 gi|315082361|gb|EFT54337.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL078PA1]
 gi|315083809|gb|EFT55785.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL027PA2]
 gi|315087306|gb|EFT59282.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL002PA3]
 gi|315089724|gb|EFT61700.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL072PA1]
 gi|315092253|gb|EFT64229.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL110PA4]
 gi|315094826|gb|EFT66802.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL060PA1]
 gi|315095599|gb|EFT67575.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL038PA1]
 gi|315104692|gb|EFT76668.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL050PA2]
 gi|315107754|gb|EFT79730.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL030PA1]
 gi|327326613|gb|EGE68401.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL096PA3]
 gi|327332877|gb|EGE74609.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL096PA2]
 gi|327335278|gb|EGE76988.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL097PA1]
 gi|327447704|gb|EGE94358.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL043PA2]
 gi|327448579|gb|EGE95233.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL043PA1]
 gi|327449568|gb|EGE96222.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL013PA2]
 gi|328757395|gb|EGF71011.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL020PA1]
 gi|328762002|gb|EGF75508.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL099PA1]
          Length = 328

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 73/141 (51%), Gaps = 3/141 (2%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+ Y WA++ Y  A  N W P E+ + +DLA +     +T DE   +   + +F  +E
Sbjct: 13  LKPVTYSWAYDLYNQAVANTWFPNEIQLDEDLADFAR---MTPDEHHALTHLMSYFNPNE 69

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVP 153
            LV   +   +Y +++  EC  YL +Q +EEA H   F+Y++ +  +D  E +  +  VP
Sbjct: 70  LLVNKALAFGVYPYVNAAECHLYLAKQMWEEANHCMAFEYVLETFPIDRDEAYRSHIHVP 129

Query: 154 SITAKANWALQYTQTLSSPSF 174
           S+  K  + + + + ++  + 
Sbjct: 130 SMARKEAFEVAFIKRMTEQTL 150


>gi|327328671|gb|EGE70431.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL103PA1]
          Length = 328

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 73/141 (51%), Gaps = 3/141 (2%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+ Y WA++ Y  A  N W P E+ + +DLA +     +T DE   +   + +F  +E
Sbjct: 13  LKPVTYSWAYDLYNQAVANTWFPNEIQLDEDLADFAR---MTPDEHHALTHLMSYFNPNE 69

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVP 153
            LV   +   +Y +++  EC  YL +Q +EEA H   F+Y++ +  +D  E +  +  VP
Sbjct: 70  LLVNKALAFGVYPYVNAAECHLYLAKQMWEEANHCMAFEYVLETFPIDRDEAYRSHIHVP 129

Query: 154 SITAKANWALQYTQTLSSPSF 174
           S+  K  + + + + ++  + 
Sbjct: 130 SMARKEAFEVAFIKRMTEQTL 150


>gi|289425969|ref|ZP_06427716.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes SK187]
 gi|289153512|gb|EFD02226.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes SK187]
 gi|313763766|gb|EFS35130.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL013PA1]
 gi|313802998|gb|EFS44206.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL110PA2]
 gi|313816916|gb|EFS54630.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL059PA1]
 gi|313829718|gb|EFS67432.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL063PA2]
 gi|313839374|gb|EFS77088.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL086PA1]
 gi|314916474|gb|EFS80305.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL005PA4]
 gi|314932316|gb|EFS96147.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL067PA1]
 gi|314956590|gb|EFT00842.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL027PA1]
 gi|314959472|gb|EFT03574.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL002PA1]
 gi|314964864|gb|EFT08964.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL082PA1]
 gi|314968630|gb|EFT12728.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL037PA1]
 gi|315079174|gb|EFT51177.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL053PA2]
 gi|315100241|gb|EFT72217.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL059PA2]
 gi|315102565|gb|EFT74541.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL046PA1]
 gi|315109517|gb|EFT81493.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL030PA2]
 gi|327455890|gb|EGF02545.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL087PA3]
 gi|327458042|gb|EGF04697.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL083PA2]
 gi|328757204|gb|EGF70820.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL087PA1]
 gi|328757585|gb|EGF71201.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL025PA2]
          Length = 328

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 73/141 (51%), Gaps = 3/141 (2%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+ Y WA++ Y  A  N W P E+ + +DLA +     +T DE   +   + +F  +E
Sbjct: 13  LKPVTYSWAYDLYNQAVANTWFPNEIQLDEDLADFAR---MTPDEHHALTHLMSYFNPNE 69

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVP 153
            LV   +   +Y +++  EC  YL +Q +EEA H   F+Y++ +  +D  E +  +  VP
Sbjct: 70  LLVNKALAFGVYPYVNAAECHLYLAKQMWEEANHCMAFEYVLETFPIDRDEAYRSHIHVP 129

Query: 154 SITAKANWALQYTQTLSSPSF 174
           S+  K  + + + + ++  + 
Sbjct: 130 SMARKEAFEVAFIKRMTEQTL 150


>gi|79160106|gb|AAI08038.1| Rrm2b protein [Danio rerio]
          Length = 349

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 84/173 (48%), Gaps = 9/173 (5%)

Query: 5   TGLSPIQAGEKRVN---VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           T ++  Q G K V+   V+D+ +L        + P++Y   W+ Y  A  + W   EV +
Sbjct: 10  TVITGYQNGHKDVDPNSVEDEPLLRENPKRFVIFPIQYPDIWKMYKQAQASFWTVEEVDL 69

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             DL  W   +GL  +E+  I   L FFA+S+ +V  N+V    + +  PE R +   Q 
Sbjct: 70  SKDLTHW---DGLKSEEKHFISHVLAFFAASDGIVNENLVQRFSQEVQLPEARSFYGFQI 126

Query: 122 FEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
             E VHS  +  +I +   D  E   LFN  + +P +  KA+WALQ+    +S
Sbjct: 127 LIENVHSEMYSMLINTYIRDLKERDYLFNAVQTMPCVRRKADWALQWISDTNS 179


>gi|255711354|ref|XP_002551960.1| KLTH0B03938p [Lachancea thermotolerans]
 gi|238933338|emb|CAR21522.1| KLTH0B03938p [Lachancea thermotolerans]
          Length = 403

 Score = 80.1 bits (196), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 5/137 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W+ Y  A  + W   E+ +  DL  W   N + ++ER  I R + FFA+S+
Sbjct: 90  LFPIKYHEIWQAYKRAEASFWTAEEIDLSKDLHDWN--NRMNENERFFISRVIAFFAASD 147

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      + +PE + +   Q   E +HS T+  +I +   D  E   LFN   
Sbjct: 148 GIVNENLVENFSAEVQSPEAKCFYGFQIMMENIHSETYSLLIDTYIKDPKESDFLFNAIE 207

Query: 151 EVPSITAKANWALQYTQ 167
            +P I  KA WA+++ Q
Sbjct: 208 TIPQIKEKAEWAIRWIQ 224


>gi|55742360|ref|NP_001007164.1| ribonucleoside-diphosphate reductase subunit M2 B [Danio rerio]
 gi|29561808|emb|CAD87804.1| novel protein similar to vertebrate ribonucleotide reductase M2 B
           (TP53 inducible) (RRM2B) [Danio rerio]
          Length = 349

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 84/173 (48%), Gaps = 9/173 (5%)

Query: 5   TGLSPIQAGEKRVN---VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           T ++  Q G K V+   V+D+ +L        + P++Y   W+ Y  A  + W   EV +
Sbjct: 10  TVITGYQNGHKDVDPNSVEDEPLLRENPKRFVIFPIQYPDIWKMYKQAQASFWTVEEVDL 69

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             DL  W   +GL  +E+  I   L FFA+S+ +V  N+V    + +  PE R +   Q 
Sbjct: 70  SKDLTHW---DGLKSEEKHFISHVLAFFAASDGIVNENLVQRFSQEVQLPEARSFYGFQI 126

Query: 122 FEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
             E VHS  +  +I +   D  E   LFN  + +P +  KA+WALQ+    +S
Sbjct: 127 LIENVHSEMYSMLINTYIRDLKERDYLFNAVQTMPCVRRKADWALQWISDTNS 179


>gi|312889900|ref|ZP_07749444.1| Ribonucleoside-diphosphate reductase [Mucilaginibacter paludis DSM
           18603]
 gi|311297432|gb|EFQ74557.1| Ribonucleoside-diphosphate reductase [Mucilaginibacter paludis DSM
           18603]
          Length = 343

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 78/170 (45%), Gaps = 12/170 (7%)

Query: 7   LSPIQAGEKRVNV------DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           LS I    K+VN       +++ +L    D   +LP+ Y   WE Y     + W   E+ 
Sbjct: 4   LSAINTKYKKVNTVTRMSQENELLLRENKDRFVILPINYPQIWEMYKKHEASFWTAEEID 63

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           + DD+  W   N L D ER  I   L FFA+S+ +V  N+ +     +  PE R +   Q
Sbjct: 64  LSDDMKDW---NNLNDGERHFISHILAFFAASDGIVNENLAVNFMSEVQLPEARCFYGFQ 120

Query: 121 AFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQ 167
              E +HS T+  +I +   D  E   LF+    VP +  K  WAL++ +
Sbjct: 121 IMMENIHSETYALLIDTYIKDTTEKNRLFHAIETVPCVKKKGEWALKWIE 170


>gi|159465835|ref|XP_001691128.1| ribonucleoside-diphosphate reductase small chain [Chlamydomonas
           reinhardtii]
 gi|158279814|gb|EDP05574.1| ribonucleoside-diphosphate reductase small chain [Chlamydomonas
           reinhardtii]
          Length = 394

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 6/153 (3%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L+   D   + P+KY   WE Y  A  + W   EV + DD+  W+    L+D ER 
Sbjct: 73  EEPLLDENPDRFCMFPIKYPQIWEMYKKAEASFWTAEEVDLGDDMKHWEK---LSDGERH 129

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I   L FFA+S+ +V  N+ +   + +  PE R +   Q   E +HS  +  ++ S   
Sbjct: 130 FISHVLAFFAASDGIVLENLAIRFMKEVQLPEARAFYGFQVAIENIHSEMYSLLLESYIK 189

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLS 170
           D  E   LF+    VP I  KA WA+++  + S
Sbjct: 190 DPQEKHKLFHSIETVPCIKKKAQWAMKWIGSDS 222


>gi|149248382|ref|XP_001528578.1| ribonucleoside-diphosphate reductase small chain [Lodderomyces
           elongisporus NRRL YB-4239]
 gi|146448532|gb|EDK42920.1| ribonucleoside-diphosphate reductase small chain [Lodderomyces
           elongisporus NRRL YB-4239]
          Length = 422

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 5/135 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W+ Y  A  + W   E+ +  D+  WK+K  L ++ER  I R L FFA+S+
Sbjct: 111 MFPIRYHEIWQMYKKAEASFWTAEEIDLGKDMHDWKNK--LNENERFFISRILAFFAASD 168

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +  PE + +   Q   E +HS T+  +I +   D  E   LFN   
Sbjct: 169 GIVNENLVENFSAEVQIPEAKSFYGFQIMMENIHSETYSLLIDTYIKDPKEADFLFNAID 228

Query: 151 EVPSITAKANWALQY 165
            +P I  KA+WA+++
Sbjct: 229 NIPQIKKKADWAIRW 243


>gi|260061082|ref|YP_003194162.1| putative ribonucleoside-diphosphate reductase small chain
           [Robiginitalea biformata HTCC2501]
 gi|88785214|gb|EAR16383.1| probable ribonucleoside-diphosphate reductase small chain
           [Robiginitalea biformata HTCC2501]
          Length = 328

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 12/156 (7%)

Query: 24  MLNARSDVNQLLPLKYG--WAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           +L    D   + P+++   W W K   AC   W   E+ +  DL+ W +K  L+DDE+  
Sbjct: 8   ILKENKDRFVIFPIQHHDLWEWYKKCEAC--FWTAEEIDLHQDLSDWNNK--LSDDEKYF 63

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+       +   E + +   Q   E +HS T+  +I +   D
Sbjct: 64  IKHILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKD 123

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSF 174
           E E   LF      P+I  KA+WAL++   + SPSF
Sbjct: 124 EKEKNVLFQAIENFPAIKKKADWALKW---IESPSF 156


>gi|85109237|ref|XP_962820.1| ribonucleoside-diphosphate reductase M2 subunit [Neurospora crassa
           OR74A]
 gi|30316285|sp|Q9C167|RIR2_NEUCR RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|16273691|gb|AAK14804.2| small subunit of ribonucleotide reductase [Neurospora crassa]
 gi|28924456|gb|EAA33584.1| ribonucleoside-diphosphate reductase M2 subunit [Neurospora crassa
           OR74A]
          Length = 410

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 79/168 (47%), Gaps = 13/168 (7%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           L P +A E  +  + +R +        L P+KY   W+ Y  A  + W   E+ +  DL 
Sbjct: 70  LKPEEANEPLLTENPQRFV--------LFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLH 121

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            W   N L DDE+  I   L FFA+S+ +V  N+V      +  PE R +   Q   E +
Sbjct: 122 DWN--NRLNDDEKFFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENI 179

Query: 127 HSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           HS T+  +I +   +  +   LFN    +P I  KA+WAL++    SS
Sbjct: 180 HSETYSLLIDTYIKEPSQRTYLFNAIDTIPCIRKKADWALRWITDKSS 227


>gi|50545856|ref|XP_500466.1| YALI0B03630p [Yarrowia lipolytica]
 gi|49646332|emb|CAG82692.1| YALI0B03630p [Yarrowia lipolytica]
          Length = 403

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 5/135 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   W+ Y  A  + W   E+ +  D+  W+  N L +DER  I   L FFA+S+
Sbjct: 89  LFPIQYHEIWQMYKKAEASFWTAEEIDLGKDMGDWE--NRLNNDERFFISHVLAFFAASD 146

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +  PE + +   Q   E +HS T+  +I +   D  E   LFN   
Sbjct: 147 GIVNENLVERFSGEVQAPEAKCFYGFQIMMENIHSETYSLLIDTYIKDPKERTYLFNAIE 206

Query: 151 EVPSITAKANWALQY 165
            +P I  KA+WAL++
Sbjct: 207 TIPCIKKKADWALKW 221


>gi|303314521|ref|XP_003067269.1| ribonucleoside-diphosphate reductase small chain, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|240106937|gb|EER25124.1| ribonucleoside-diphosphate reductase small chain, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|320037571|gb|EFW19508.1| ribonucleoside-diphosphate reductase small subunit [Coccidioides
           posadasii str. Silveira]
          Length = 408

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 5/141 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L PLKY   W+ Y  A  + W   E+ +  DL  W  +  L DDER  I R L FFA+S+
Sbjct: 89  LFPLKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNHR--LNDDERYFISRVLAFFAASD 146

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +  PE R +   Q   E +HS T+  +I +   +  +   LF+   
Sbjct: 147 GIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEPKQRTYLFDAID 206

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +P I  KA+WA+++ Q   S
Sbjct: 207 TIPCIRKKADWAIRWIQDQES 227


>gi|119174781|ref|XP_001239725.1| hypothetical protein CIMG_09346 [Coccidioides immitis RS]
          Length = 408

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 5/141 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L PLKY   W+ Y  A  + W   E+ +  DL  W  +  L DDER  I R L FFA+S+
Sbjct: 89  LFPLKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNHR--LNDDERYFISRVLAFFAASD 146

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +  PE R +   Q   E +HS T+  +I +   +  +   LF+   
Sbjct: 147 GIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEPKQRTYLFDAID 206

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +P I  KA+WA+++ Q   S
Sbjct: 207 TIPCIRKKADWAIRWIQDQES 227


>gi|150024561|ref|YP_001295387.1| ribonucleoside-diphosphate reductase, beta subunit [Flavobacterium
           psychrophilum JIP02/86]
 gi|149771102|emb|CAL42569.1| Ribonucleoside-diphosphate reductase, beta subunit [Flavobacterium
           psychrophilum JIP02/86]
          Length = 325

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 72/140 (51%), Gaps = 5/140 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+K+   WE Y S   + W   E+ +  DL  W +K  L++DER  +K  L FFA+S+
Sbjct: 17  IFPIKHHDIWEFYKSMEASFWTAEEIDLSQDLNDWNNK--LSNDERYFVKHILAFFAASD 74

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE---GELFNMYR 150
            +V  N+       +   E + +   Q   E +HS T+  +I +   DE    ELFN   
Sbjct: 75  GIVNENLAENFVNEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKDEVEKDELFNALE 134

Query: 151 EVPSITAKANWALQYTQTLS 170
             P+I  KA+WALQ+ ++ S
Sbjct: 135 VFPAIKKKADWALQWIESDS 154


>gi|156386903|ref|XP_001634150.1| predicted protein [Nematostella vectensis]
 gi|156221230|gb|EDO42087.1| predicted protein [Nematostella vectensis]
          Length = 384

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 75/154 (48%), Gaps = 6/154 (3%)

Query: 13  GEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
            + R N +D+ +L        +LP++Y   W+ Y  A  + W   EV +  D   +    
Sbjct: 56  AKSRFNTEDEPLLRENPHRFVILPIQYPEIWQMYKKAEASFWTAEEVDLSKDSHDFAK-- 113

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
            L DDER+ +   L FFA+S+ +V  N+V    + +  PE R +   Q   E +HS  + 
Sbjct: 114 -LNDDERMFVSHVLAFFAASDGIVNENLVECFCQEVQIPEARCFYGFQIAIENIHSEMYS 172

Query: 133 YIITSLGLDEGE---LFNMYREVPSITAKANWAL 163
            +I SL  D+ E   LFN    +P +  KA+WAL
Sbjct: 173 LLIESLIKDKAEKVNLFNAIETMPCVMKKAHWAL 206


>gi|156387377|ref|XP_001634180.1| predicted protein [Nematostella vectensis]
 gi|156221260|gb|EDO42117.1| predicted protein [Nematostella vectensis]
          Length = 341

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 75/154 (48%), Gaps = 6/154 (3%)

Query: 13  GEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
            + R N +D+ +L        +LP++Y   W+ Y  A  + W   EV +  D   +    
Sbjct: 13  AKSRFNTEDEPLLRENPHRFVILPIQYPEIWQMYKKAEASFWTAEEVDLSKDSHDFAK-- 70

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
            L DDER+ +   L FFA+S+ +V  N+V    + +  PE R +   Q   E +HS  + 
Sbjct: 71  -LNDDERMFVSHVLAFFAASDGIVNENLVECFSQEVQIPEARCFYGFQIAIENIHSEMYS 129

Query: 133 YIITSLGLDEGE---LFNMYREVPSITAKANWAL 163
            +I SL  D+ E   LFN    +P +  KA+WAL
Sbjct: 130 LLIESLIKDKAEKVNLFNAIETMPCVMKKAHWAL 163


>gi|225561749|gb|EEH10029.1| ribonucleotide reductase M2 B [Ajellomyces capsulatus G186AR]
 gi|240275354|gb|EER38868.1| ribonucleoside-diphosphate reductase subunit small [Ajellomyces
           capsulatus H143]
 gi|325091193|gb|EGC44503.1| ribonucleoside-diphosphate reductase subunit small [Ajellomyces
           capsulatus H88]
          Length = 413

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 80/170 (47%), Gaps = 13/170 (7%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
           TG+  ++A E  +  +  R +        L PLKY   W+ Y  A  + W   E+ +  D
Sbjct: 70  TGVKALEADEPLLQENPNRFV--------LFPLKYHEIWQMYKKAEASFWTAEEIDLSKD 121

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           L  W   N L DDER  I   L FFA+S+ +V  N+V      +  PE R +   Q   E
Sbjct: 122 LHDWN--NRLNDDERYFISHVLAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMME 179

Query: 125 AVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
            +HS T+  +I +   +  +   LF+    +P I  KA+WA+++ +   S
Sbjct: 180 NIHSETYSLLIDTYIKEPKQRTYLFDAIETIPCIRKKADWAIRWIEDKDS 229


>gi|320580024|gb|EFW94247.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR)
           complex [Pichia angusta DL-1]
          Length = 408

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 5/135 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W+ Y  A  + W   E+ +  DL  W   N L D+ER  + R L FFA+S+
Sbjct: 94  LFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWN--NRLNDNERYFVSRVLAFFAASD 151

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +  PE + +   Q   E +HS T+  +I +   D  E   LFN   
Sbjct: 152 GIVNENLVENFSAEVQVPEAKCFYGFQIMMENIHSETYSLLIDTYVKDPKEAEFLFNAIE 211

Query: 151 EVPSITAKANWALQY 165
            +P I  KA WA+++
Sbjct: 212 TIPCIKEKAEWAMRW 226


>gi|296421312|ref|XP_002840209.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295636423|emb|CAZ84400.1| unnamed protein product [Tuber melanosporum]
          Length = 397

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 71/141 (50%), Gaps = 5/141 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W+ Y  A  + W+  E+ +  D+  W  +  L DDER  I   L FFA+S+
Sbjct: 79  LFPIKYHEIWQMYKKAEASFWVAEEIDLSKDMHDWSDR--LNDDERYFISHVLAFFAASD 136

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +  PE R +   Q   E VHS T+  +I +   D  +   LF+   
Sbjct: 137 GIVNENLVQRFSNEVQIPEARCFYGFQIMMENVHSETYSLLIDTYIKDPKQRTYLFDAID 196

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +P I  KA+WA+++ +  +S
Sbjct: 197 TIPCIKKKADWAIRWIEDRNS 217


>gi|307104534|gb|EFN52787.1| hypothetical protein CHLNCDRAFT_10712 [Chlorella variabilis]
          Length = 214

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 77/150 (51%), Gaps = 6/150 (4%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +L A ++   LLP+KY   +E Y  A  ++W   EV +  D+  W+    LTDDER  + 
Sbjct: 4   ILQANNERFCLLPVKYDRCFEYYKQAQASYWTAEEVDLSQDMRDWRK---LTDDERHFVS 60

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
             L FFA+S+ +V  N+     + +  PE R +   Q+  EAVHS  +  ++     D  
Sbjct: 61  YVLAFFAASDGIVLENLSTRFMQEVQIPEARAFYAFQSAIEAVHSEMYGLLLEQYIRDPD 120

Query: 144 E---LFNMYREVPSITAKANWALQYTQTLS 170
           E   LF+    +P +  KA WA+++ ++ S
Sbjct: 121 ERDLLFHAVDTIPCVQKKAQWAMKWIESSS 150


>gi|154283275|ref|XP_001542433.1| hypothetical protein HCAG_02604 [Ajellomyces capsulatus NAm1]
 gi|150410613|gb|EDN06001.1| hypothetical protein HCAG_02604 [Ajellomyces capsulatus NAm1]
          Length = 255

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 80/170 (47%), Gaps = 13/170 (7%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
           TG+  ++A E  +  +  R +        L PLKY   W+ Y  A  + W   E+ +  D
Sbjct: 70  TGVKALEADEPLLQENPNRFV--------LFPLKYHEIWQMYKKAEASFWTAEEIDLSKD 121

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           L  W   N L DDER  I   L FFA+S+ +V  N+V      +  PE R +   Q   E
Sbjct: 122 LHDWN--NRLNDDERYFISHVLAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMME 179

Query: 125 AVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
            +HS T+  +I +   +  +   LF+    +P I  KA+WA+++ +   S
Sbjct: 180 NIHSETYSLLIDTYIKEPKQRTYLFDAIETIPCIRKKADWAIRWIEDKDS 229


>gi|46122063|ref|XP_385585.1| hypothetical protein FG05409.1 [Gibberella zeae PH-1]
          Length = 399

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 5/141 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W+ Y  A  + W   E+ +  DL  W   N LT DE+  I   L FFA+S+
Sbjct: 79  LFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWN--NRLTSDEQYFISHILAFFAASD 136

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +  PE R +   Q   E +HS T+  +I +   D  +   LFN   
Sbjct: 137 GIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIKDPAQRTYLFNAVD 196

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +P I  KA+WA+++ Q  +S
Sbjct: 197 TIPCIRKKADWAIRWIQDKNS 217


>gi|167957419|ref|ZP_02544493.1| ribonucleotide-diphosphate reductase subunit beta [candidate
           division TM7 single-cell isolate TM7c]
          Length = 277

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 3/134 (2%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
           QL P++Y WA+  Y  A  N W P EV +  DLA +K    LT+DE+  +K  + +   +
Sbjct: 19  QLKPVRYEWAYRLYNQAVANTWFPNEVQLVQDLADFKK---LTEDEKNALKTVISYLNPN 75

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
           E L+  ++   IY  ++  EC  YL +Q +EEA H  TF+YII +   +  E++      
Sbjct: 76  ELLINKSLAFGIYPCVNAAECHLYLSKQMWEEANHFMTFEYIIETFPFNREEIYAAGWGK 135

Query: 153 PSITAKANWALQYT 166
            S+  KA +  +Y 
Sbjct: 136 KSLADKAAFQTKYV 149


>gi|261189551|ref|XP_002621186.1| ribonucleotide reductase small subunit RnrA [Ajellomyces
           dermatitidis SLH14081]
 gi|239591422|gb|EEQ74003.1| ribonucleotide reductase small subunit RnrA [Ajellomyces
           dermatitidis SLH14081]
 gi|239613047|gb|EEQ90034.1| ribonucleotide reductase small subunit RnrA [Ajellomyces
           dermatitidis ER-3]
 gi|327356917|gb|EGE85774.1| ribonucleotide reductase M2 B [Ajellomyces dermatitidis ATCC 18188]
          Length = 413

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 80/170 (47%), Gaps = 13/170 (7%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
           TG+  ++A E  +  +  R +        L PLKY   W+ Y  A  + W   E+ +  D
Sbjct: 70  TGMKALEAEEPLLQENPNRFV--------LFPLKYHEIWQMYKKAEASFWTAEEIDLSKD 121

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           L  W   N L DDER  I   L FFA+S+ +V  N+V      +  PE R +   Q   E
Sbjct: 122 LHDWN--NRLNDDERYFISHVLAFFAASDGIVNENLVERFSSEVQVPEARCFYGFQIMME 179

Query: 125 AVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
            +HS T+  +I +   +  +   LF+    +P I  KA+WA+++ +   S
Sbjct: 180 NIHSETYSLLIDTYIKEPKQRTYLFDAIDTIPCIRKKADWAIRWIEDKES 229


>gi|2465173|emb|CAA71741.1| ribonucleotide reductase (Class I) [Trypanosoma brucei brucei]
          Length = 337

 Score = 79.0 bits (193), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 6/154 (3%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L    D   + P+KY   W+KY  A ++ W   E+ + +D+  W+    L D ER 
Sbjct: 16  EEPLLTENPDRYVIFPIKYPDIWQKYKKAESSIWTVEEIDLGNDMTDWEK---LDDGERH 72

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            IK  L FFA+S+ +V  N+       +  PE R +   Q   E +HS T+  +I +  +
Sbjct: 73  FIKHVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHSETYSVLIDTYVV 132

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           D  E   L +  R +P I  KA WA+++  + +S
Sbjct: 133 DPDEKQRLLHAIRTIPCIEKKAKWAIEWIGSQTS 166


>gi|3914640|sp|O15910|RIR2_TRYBB RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase R2 subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|2411479|gb|AAB70705.1| ribonucleotide reductase small subunit [Trypanosoma brucei]
 gi|261335314|emb|CBH18308.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei gambiense DAL972]
          Length = 337

 Score = 79.0 bits (193), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 6/154 (3%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L    D   + P+KY   W+KY  A ++ W   E+ + +D+  W+    L D ER 
Sbjct: 16  EEPLLTENPDRYVIFPIKYPDIWQKYKEAESSIWTVEEIDLGNDMTDWEK---LDDGERH 72

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            IK  L FFA+S+ +V  N+       +  PE R +   Q   E +HS T+  +I +  +
Sbjct: 73  FIKHVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHSETYSVLIDTYVV 132

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           D  E   L +  R +P I  KA WA+++  + +S
Sbjct: 133 DPDEKQRLLHAIRTIPCIEKKAKWAIEWIGSQTS 166


>gi|74025550|ref|XP_829341.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
 gi|70834727|gb|EAN80229.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
 gi|261335315|emb|CBH18309.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei gambiense DAL972]
          Length = 337

 Score = 79.0 bits (193), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 6/154 (3%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L    D   + P+KY   W+KY  A ++ W   E+ + +D+  W+    L D ER 
Sbjct: 16  EEPLLTENPDRYVIFPIKYPDIWQKYKEAESSIWTVEEIDLGNDMTDWEK---LDDGERH 72

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            IK  L FFA+S+ +V  N+       +  PE R +   Q   E +HS T+  +I +  +
Sbjct: 73  FIKHVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHSETYSVLIDTYVV 132

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           D  E   L +  R +P I  KA WA+++  + +S
Sbjct: 133 DPDEKQRLLHAIRTIPCIEKKAKWAIEWIGSQTS 166


>gi|74025552|ref|XP_829342.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
 gi|70834728|gb|EAN80230.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
          Length = 337

 Score = 79.0 bits (193), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 6/154 (3%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L    D   + P+KY   W+KY  A ++ W   E+ + +D+  W+    L D ER 
Sbjct: 16  EEPLLTENPDRYVIFPIKYPDIWQKYKEAESSIWTVEEIDLGNDMTDWEK---LDDGERH 72

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            IK  L FFA+S+ +V  N+       +  PE R +   Q   E +HS T+  +I +  +
Sbjct: 73  FIKHVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHSETYSVLIDTYVV 132

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           D  E   L +  R +P I  KA WA+++  + +S
Sbjct: 133 DPDEKQRLLHAIRTIPCIEKKAKWAIEWIGSQTS 166


>gi|254572986|ref|XP_002493602.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR)
           complex [Pichia pastoris GS115]
 gi|238033401|emb|CAY71423.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR)
           complex [Pichia pastoris GS115]
 gi|328354568|emb|CCA40965.1| ribonucleoside-diphosphate reductase subunit M2 [Pichia pastoris
           CBS 7435]
          Length = 400

 Score = 78.6 bits (192), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 5/135 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L PLKY   W+ Y  A  + W   E+ +  DL  W   N + D+E+  I R L FFA+S+
Sbjct: 88  LFPLKYHDIWQMYKQAEASFWTAEEIDLGKDLHDWN--NRMNDNEKFFISRVLAFFAASD 145

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +  PE + +   Q   E +HS T+  +I +   D  E   LFN   
Sbjct: 146 GIVNENLVENFSAEVQLPEAKCFYGFQIMMENIHSETYSLLIDTYIKDPKESEFLFNAIE 205

Query: 151 EVPSITAKANWALQY 165
            +P I  KA+WA+++
Sbjct: 206 TIPCIKEKADWAMRW 220


>gi|255954081|ref|XP_002567793.1| Pc21g07530 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211589504|emb|CAP95650.1| Pc21g07530 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 400

 Score = 78.6 bits (192), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 5/135 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+KY   W+ Y  A  + W   E+ +  DL  W   N L DDER  I   L FFA+S+
Sbjct: 81  MFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWH--NRLNDDERYFISHVLAFFAASD 138

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +  PE R +   Q   E +HS T+  +I +   +  +   LF+   
Sbjct: 139 GIVNENLVERFSAEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEPKQRTYLFDAID 198

Query: 151 EVPSITAKANWALQY 165
            +P IT KANWA+++
Sbjct: 199 TIPCITKKANWAIRW 213


>gi|225010999|ref|ZP_03701465.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
           MS024-3C]
 gi|225004906|gb|EEG42862.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
           MS024-3C]
          Length = 328

 Score = 78.6 bits (192), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 76/156 (48%), Gaps = 12/156 (7%)

Query: 24  MLNARSDVNQLLPLKYG--WAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           +L    D   + P+K+   W W K   AC   W   E+ + +DL  W +K  L +DER  
Sbjct: 8   ILTENPDRFVIFPIKHDDLWEWYKKCEAC--FWTAEEIDLSEDLNDWNNK--LNEDERYF 63

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           +K  L FFA+S+ +V  N+       +   E + +   Q   E +HS T+  +I +   D
Sbjct: 64  VKHILAFFAASDGIVNENLAENFVSEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKD 123

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSF 174
           E E   LF      P+I  KA+WAL++   + SPSF
Sbjct: 124 EKEKNKLFKALENFPAIKEKADWALKW---IESPSF 156


>gi|224418874|ref|ZP_03656880.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           canadensis MIT 98-5491]
          Length = 340

 Score = 78.6 bits (192), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 87/157 (55%), Gaps = 4/157 (2%)

Query: 18  NVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           +V+++R+     + + +L  +KY WA+  +     N W P EV M  D   +   +GLT 
Sbjct: 14  SVNERRIFGGNPTSIFELNKIKYQWAYNLWKVMLANSWFPEEVNMTQDKRDYA--DGLTP 71

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
           +E++   R L      +SL  NN++  +  ++++PE    L+RQAFEEA+HS ++  ++ 
Sbjct: 72  EEKIGYDRALAQLIFMDSLQTNNLIDNVNPYITSPEINLILVRQAFEEALHSQSYAVMVE 131

Query: 137 SLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSP 172
           S+  +  E+++M+R    + AK ++  + Y Q  ++P
Sbjct: 132 SISANTDEIYDMWRSDMQLKAKNDYIAEVYEQLATNP 168


>gi|253827828|ref|ZP_04870713.1| ribonucleotide-diphosphate reductase beta subunit [Helicobacter
           canadensis MIT 98-5491]
 gi|313142391|ref|ZP_07804584.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           canadensis MIT 98-5491]
 gi|253511234|gb|EES89893.1| ribonucleotide-diphosphate reductase beta subunit [Helicobacter
           canadensis MIT 98-5491]
 gi|313131422|gb|EFR49039.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           canadensis MIT 98-5491]
          Length = 341

 Score = 78.6 bits (192), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 87/157 (55%), Gaps = 4/157 (2%)

Query: 18  NVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           +V+++R+     + + +L  +KY WA+  +     N W P EV M  D   +   +GLT 
Sbjct: 15  SVNERRIFGGNPTSIFELNKIKYQWAYNLWKVMLANSWFPEEVNMTQDKRDYA--DGLTP 72

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
           +E++   R L      +SL  NN++  +  ++++PE    L+RQAFEEA+HS ++  ++ 
Sbjct: 73  EEKIGYDRALAQLIFMDSLQTNNLIDNVNPYITSPEINLILVRQAFEEALHSQSYAVMVE 132

Query: 137 SLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSP 172
           S+  +  E+++M+R    + AK ++  + Y Q  ++P
Sbjct: 133 SISANTDEIYDMWRSDMQLKAKNDYIAEVYEQLATNP 169


>gi|258567064|ref|XP_002584276.1| ribonucleoside-diphosphate reductase small chain [Uncinocarpus
           reesii 1704]
 gi|237905722|gb|EEP80123.1| ribonucleoside-diphosphate reductase small chain [Uncinocarpus
           reesii 1704]
          Length = 401

 Score = 78.6 bits (192), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 69/141 (48%), Gaps = 5/141 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L PLKY   W+ Y  A  + W   E+ +  DL  W  +  L DDER  I R L FFA+S+
Sbjct: 82  LFPLKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNHR--LNDDERYFISRVLAFFAASD 139

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +  PE R +   Q   E +HS T+  +I +   +  +   LF    
Sbjct: 140 GIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIKEPKQRTYLFEALD 199

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +P I  KA+WA+++ Q   S
Sbjct: 200 NIPCIRKKADWAIRWIQDKDS 220


>gi|322709430|gb|EFZ01006.1| ribonucleoside-diphosphate reductase M2 subunit [Metarhizium
           anisopliae ARSEF 23]
          Length = 414

 Score = 78.6 bits (192), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 69/141 (48%), Gaps = 5/141 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W+ Y  A  + W   E+ +  DL  W   N L DDE+  I   L FFA+S+
Sbjct: 93  LFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWN--NRLNDDEKYFISHILAFFAASD 150

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +  PE R +   Q   E +HS T+  +I +   +  +   LFN   
Sbjct: 151 GIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIKENAQRTYLFNAID 210

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +P I  KA+WA+++ Q   S
Sbjct: 211 TIPCIRKKADWAIRWIQDKES 231


>gi|68481406|ref|XP_715342.1| hypothetical protein CaO19.5801 [Candida albicans SC5314]
 gi|68481537|ref|XP_715277.1| hypothetical protein CaO19.13223 [Candida albicans SC5314]
 gi|46436893|gb|EAK96248.1| hypothetical protein CaO19.13223 [Candida albicans SC5314]
 gi|46436961|gb|EAK96315.1| hypothetical protein CaO19.5801 [Candida albicans SC5314]
 gi|238882096|gb|EEQ45734.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
           albicans WO-1]
          Length = 413

 Score = 78.2 bits (191), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 5/137 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W  Y  A  + W   E+ +  DL  W +K  L ++ER  I R L FFA+S+
Sbjct: 102 MFPIRYHEIWNFYKKAEASFWTAEEIDLSKDLDDWNNK--LNENERYFISRVLAFFAASD 159

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N++      +  PE + +   Q   E +HS T+  +I +   D  E   LFN   
Sbjct: 160 GIVGENLIENFSTEVQLPEAKSFYGFQIMMENIHSETYSLLIETYIKDPQEADYLFNAIA 219

Query: 151 EVPSITAKANWALQYTQ 167
            +P I  KA+WA+++ Q
Sbjct: 220 NIPCIQKKADWAIKWIQ 236


>gi|322693757|gb|EFY85606.1| ribonucleoside-diphosphate reductase M2 subunit [Metarhizium
           acridum CQMa 102]
          Length = 411

 Score = 78.2 bits (191), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 69/141 (48%), Gaps = 5/141 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W+ Y  A  + W   E+ +  DL  W   N L DDE+  I   L FFA+S+
Sbjct: 90  LFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWN--NRLNDDEKYFISHILAFFAASD 147

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +  PE R +   Q   E +HS T+  +I +   +  +   LFN   
Sbjct: 148 GIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIKENAQRTYLFNAID 207

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +P I  KA+WA+++ Q   S
Sbjct: 208 TIPCIRKKADWAIRWIQDKES 228


>gi|145249942|ref|XP_001401310.1| ribonucleoside-diphosphate reductase small chain [Aspergillus niger
           CBS 513.88]
 gi|134081995|emb|CAK46680.1| unnamed protein product [Aspergillus niger]
          Length = 396

 Score = 78.2 bits (191), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 13/169 (7%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           G+  ++A E  +  +  R +        L P+KY   W+ Y  A  + W   E+ +  DL
Sbjct: 60  GIKEMEASEPLLQENPHRFV--------LFPIKYHEIWQMYKKAEASFWTAEEIDLSKDL 111

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             W   N L DDER  I   L FFA+S+ +V  N+V      +  PE R +   Q   E 
Sbjct: 112 HDWH--NRLNDDERYFISHVLAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMEN 169

Query: 126 VHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           +HS T+  +I +   +  +   LF+    +P I  KA+WA+++ Q   S
Sbjct: 170 IHSETYSLLIDTYIKEPKQRTYLFDAIDTIPCIAKKADWAIKWIQDRES 218


>gi|330921941|ref|XP_003299625.1| hypothetical protein PTT_10664 [Pyrenophora teres f. teres 0-1]
 gi|311326599|gb|EFQ92269.1| hypothetical protein PTT_10664 [Pyrenophora teres f. teres 0-1]
          Length = 410

 Score = 78.2 bits (191), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 5/167 (2%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           A+   + P  A   +    D+ +L        L P+KY   W+ Y  A  + W   E+ +
Sbjct: 52  ADAEEVKPTVAPTIKPEEADEPLLQENPGRFVLFPIKYHDVWQMYKKAEASFWTAEEIDL 111

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             DL  W  +  L DDER  I   L FFA+S+ +V  N+V      +  PE R +   Q 
Sbjct: 112 SKDLHDWNKR--LNDDERFFISHVLAFFAASDGIVNENLVERFSSEVQIPEARCFYGFQI 169

Query: 122 FEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
             E VHS T+  +I +   +  +   LFN    +P I  KA+WAL++
Sbjct: 170 MMENVHSETYSLLIDTYISEPRQRKYLFNAIDNIPCIRKKADWALRW 216


>gi|146418573|ref|XP_001485252.1| hypothetical protein PGUG_02981 [Meyerozyma guilliermondii ATCC
           6260]
 gi|146390725|gb|EDK38883.1| hypothetical protein PGUG_02981 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 418

 Score = 78.2 bits (191), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 5/135 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+KY   W+ Y  A  + W   E+ +  D+  W   N L D+ER  I R L FFA+S+
Sbjct: 103 MFPIKYHEIWKMYKKAEASFWTAEEIDLGKDMHDWN--NRLNDNERYFISRILAFFAASD 160

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +  PE + +   Q   E +HS T+  +I +   D  E   LFN   
Sbjct: 161 GIVNENLVENFSAEVQIPEAKCFYGFQIMMENIHSETYSLLIDTYIKDPKEADFLFNAIE 220

Query: 151 EVPSITAKANWALQY 165
            +P I  KA+WAL++
Sbjct: 221 NIPCIKKKADWALRW 235


>gi|302904131|ref|XP_003049009.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256729943|gb|EEU43296.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 389

 Score = 78.2 bits (191), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 69/141 (48%), Gaps = 5/141 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W+ Y  A  + W   E+ +  DL  W   N LT DE+  I   L FFA+S+
Sbjct: 69  LFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWN--NRLTSDEQFFISHILAFFAASD 126

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +  PE R +   Q   E +HS T+  +I +   +  +   LFN   
Sbjct: 127 GIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIKEPSQRTYLFNAIE 186

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +P I  KA+WA+++ Q   S
Sbjct: 187 TIPCIRKKADWAIRWIQDKDS 207


>gi|116191729|ref|XP_001221677.1| hypothetical protein CHGG_05582 [Chaetomium globosum CBS 148.51]
 gi|88181495|gb|EAQ88963.1| hypothetical protein CHGG_05582 [Chaetomium globosum CBS 148.51]
          Length = 409

 Score = 77.8 bits (190), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 5/135 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W+ Y  A  + W   E+ +  DL  W +K  + DDE+  I   L FFA+S+
Sbjct: 88  LFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNK--INDDEKYFISHILAFFAASD 145

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +  PE R +   Q   E +HS T+  +I +   +  +   LFN   
Sbjct: 146 GIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEPAQRTHLFNAID 205

Query: 151 EVPSITAKANWALQY 165
            +P+I  KA+WAL++
Sbjct: 206 TIPAIRKKADWALRW 220


>gi|313844096|ref|YP_004061759.1| hypothetical protein OlV1_126 [Ostreococcus lucimarinus virus OlV1]
 gi|312599481|gb|ADQ91503.1| hypothetical protein OlV1_126 [Ostreococcus lucimarinus virus OlV1]
          Length = 408

 Score = 77.8 bits (190), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 70/140 (50%), Gaps = 6/140 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + PLKY   WE Y  A  ++W   EV +  DL  WK+   L ++E+  IK  L FFA S+
Sbjct: 105 VFPLKYPHLWELYKKAQMSNWTAEEVDLSKDLDDWKT---LNENEKKFIKYILAFFAGSD 161

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL---GLDEGELFNMYR 150
            +V  NI       + + E R +   Q   E VH  T+  +I      G ++ +LF   +
Sbjct: 162 GIVFENINNNFADEVQSSEARSFYAYQCHNEMVHGETYSKLIDKYIKDGAEKKQLFEAIQ 221

Query: 151 EVPSITAKANWALQYTQTLS 170
            VP I  KA+WA+++  T S
Sbjct: 222 TVPCIQKKADWAMKWFDTKS 241


>gi|145349720|ref|XP_001419276.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579507|gb|ABO97569.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 329

 Score = 77.8 bits (190), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 16/171 (9%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           +SP+   E  ++ +D+R          + P++Y   WE Y  A  + W   EV + DD+ 
Sbjct: 1   MSPLPLAEPLLDENDQRF--------TMFPIQYPQVWEMYKKAEASFWTAEEVDLSDDMK 52

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            W++   LT DE+  +   L FFA+S+ +V  N+ +     +  PE R +   Q   E +
Sbjct: 53  HWET---LTKDEKHFVSHVLAFFAASDGIVLENLGVRFMGEVQIPEARAFYGFQIAIENI 109

Query: 127 HSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSF 174
           HS  +  +I     D  E   LF     +P +  KA+WAL++    SS SF
Sbjct: 110 HSEMYSLLIDQYIKDPVEKDHLFRAIDTIPCVKKKADWALKWID--SSDSF 158


>gi|241951880|ref|XP_002418662.1| ribonucleoside diphosphate reductase, putative [Candida
           dubliniensis CD36]
 gi|223642001|emb|CAX43965.1| ribonucleoside diphosphate reductase, putative [Candida
           dubliniensis CD36]
          Length = 394

 Score = 77.8 bits (190), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 5/137 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+KY   W+ Y  +  + W   E+ +  DLA W   N + ++ER  I R L FFA+S+
Sbjct: 83  IYPIKYPELWQFYKKSLASFWTAEELDLSKDLADWN--NKMNENERFFISRVLAFFAASD 140

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +  PE +     Q   E +HS T+  +I +   D  E   LFN   
Sbjct: 141 GIVNENLVENFCAEVQIPEAQSVYKFQIMMENIHSETYSLLIETYFKDPEEADFLFNAIE 200

Query: 151 EVPSITAKANWALQYTQ 167
            +P I  KA+WA+++ Q
Sbjct: 201 NIPFIREKADWAIRWIQ 217


>gi|86134368|ref|ZP_01052950.1| ribonucleoside-diphosphate reductase small chain [Polaribacter sp.
           MED152]
 gi|85821231|gb|EAQ42378.1| ribonucleoside-diphosphate reductase small chain [Polaribacter sp.
           MED152]
          Length = 323

 Score = 77.8 bits (190), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 73/142 (51%), Gaps = 9/142 (6%)

Query: 34  LLPLKYG--WAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFAS 91
           + P+++   W W K   AC   W   E+ +  DL  W +K  LTDDER  IK  L FFA+
Sbjct: 17  IFPIQHNDLWEWYKKQQAC--FWTAEEIDLHSDLVDWTTK--LTDDERYFIKHILAFFAA 72

Query: 92  SESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYRE 151
           S+ +V  N+       +   E + +   Q   E +HS T+  +I +   DE E   ++R 
Sbjct: 73  SDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDEVEKDRLFRA 132

Query: 152 V---PSITAKANWALQYTQTLS 170
           +   P+I  KA+WAL++ ++ S
Sbjct: 133 IEVFPAIKKKADWALKWIESES 154


>gi|302409182|ref|XP_003002425.1| ribonucleoside-diphosphate reductase small chain [Verticillium
           albo-atrum VaMs.102]
 gi|261358458|gb|EEY20886.1| ribonucleoside-diphosphate reductase small chain [Verticillium
           albo-atrum VaMs.102]
          Length = 414

 Score = 77.8 bits (190), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 74/162 (45%), Gaps = 17/162 (10%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W+ Y  A  + W   E+ +  DL  W +K  + DDE+  I   L FFA+S+
Sbjct: 93  LFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNK--INDDEKYFISHILAFFAASD 150

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +  PE R +   Q   E +HS T+  +I +   +  +   LFN   
Sbjct: 151 GIVNENLVERFSAEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEPAQRTYLFNAID 210

Query: 151 EVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
            +P I  KA+WAL             W   ++S   TR + F
Sbjct: 211 TIPCIRKKADWALT------------WITDKKSTFATRLVAF 240


>gi|330804590|ref|XP_003290276.1| hypothetical protein DICPUDRAFT_56591 [Dictyostelium purpureum]
 gi|325079602|gb|EGC33194.1| hypothetical protein DICPUDRAFT_56591 [Dictyostelium purpureum]
          Length = 335

 Score = 77.8 bits (190), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 5/150 (3%)

Query: 19  VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
           + ++ +L    D   L P+KY   W  Y  A  + W   E+ +  DL  W SK  L D+E
Sbjct: 4   IIEEPILKENKDRFVLFPIKYPDIWSMYKQAEASFWTAEEIDLAPDLNDWSSK--LNDNE 61

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           R  I   L FFA+S+ +V  N+       +  PE R +   Q   E +HS T+  +I + 
Sbjct: 62  RHFISNVLAFFAASDGIVNENLATRFMSEVQIPEARCFYGFQIAIENIHSETYSLLIDTY 121

Query: 139 GLD---EGELFNMYREVPSITAKANWALQY 165
             D   + +LFN    +P I  KA+WAL++
Sbjct: 122 IKDNEQKSKLFNAIDTIPCIKKKADWALKW 151


>gi|241951066|ref|XP_002418255.1| ribonucleoside-diphosphate reductase small chain 1, putative;
           ribonucleotide reductase r2 subunit 1, putative;
           ribonucleotide reductase small subunit 1, putative
           [Candida dubliniensis CD36]
 gi|223641594|emb|CAX43555.1| ribonucleoside-diphosphate reductase small chain 1, putative
           [Candida dubliniensis CD36]
          Length = 413

 Score = 77.8 bits (190), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 5/137 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W  Y  A  + W   E+ +  DL  W +K  L ++ER  + R L FFA+S+
Sbjct: 102 MFPIRYHEIWNFYKKAEASFWTAEEIDLSKDLDDWNNK--LNENERYFVSRVLAFFAASD 159

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N++      +  PE + +   Q   E +HS T+  +I +   D  E   LFN   
Sbjct: 160 GIVGENLIENFSTEVQLPEAKSFYGFQIMMENIHSETYSLLIETYIKDPQEADYLFNAIA 219

Query: 151 EVPSITAKANWALQYTQ 167
            +P I  KA+WA+++ Q
Sbjct: 220 NIPCIQKKADWAIKWIQ 236


>gi|74025554|ref|XP_829343.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
 gi|70834729|gb|EAN80231.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
          Length = 337

 Score = 77.8 bits (190), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 6/154 (3%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L    D   + P+KY   W+KY  A +N W    + + +D+  W+    L D ER 
Sbjct: 16  EEPLLTENPDRYVIFPIKYPDIWQKYKKARSNFWAMENIYLGNDMTDWEK---LDDGERH 72

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            IK  L FFA+ + +V  N V      +  PE R +   Q   E +HS T+  +I +  +
Sbjct: 73  FIKHVLAFFAARDGIVLENFVQRFMCEVQVPEVRCFYGFQIAMENIHSETYSVLIDTYVV 132

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           D  E   L +  R +P I  KA WA+++  + +S
Sbjct: 133 DPDEKQRLLHAIRTIPCIEKKAKWAIEWIGSQTS 166


>gi|326483608|gb|EGE07618.1| hypothetical protein TEQG_06532 [Trichophyton equinum CBS 127.97]
          Length = 317

 Score = 77.8 bits (190), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 13/165 (7%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           ++A E R+  + +R +        L P+KY   W+ Y  A  + W   E+ +  D+  W 
Sbjct: 73  LEAEEPRLQENPQRFV--------LFPIKYREIWQMYKKAEASFWTAEEIDLSKDIHDWN 124

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
             N L DDER  I   L FFA+S+ +V  N++      +  PE R +   Q   E +HS 
Sbjct: 125 --NRLNDDERFFISHVLAFFAASDGIVNENLLERFSNEVQVPEARCFYGFQIMMENIHSE 182

Query: 130 TFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           T+  +I +   ++ +   LF     +P I  KA+WA+++ Q  +S
Sbjct: 183 TYSLLIDTYIKEQKQRTYLFEAIDTIPCIRKKADWAIRWIQDKNS 227


>gi|302783485|ref|XP_002973515.1| hypothetical protein SELMODRAFT_173451 [Selaginella moellendorffii]
 gi|302787555|ref|XP_002975547.1| hypothetical protein SELMODRAFT_175019 [Selaginella moellendorffii]
 gi|300156548|gb|EFJ23176.1| hypothetical protein SELMODRAFT_175019 [Selaginella moellendorffii]
 gi|300158553|gb|EFJ25175.1| hypothetical protein SELMODRAFT_173451 [Selaginella moellendorffii]
          Length = 347

 Score = 77.4 bits (189), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 8/144 (5%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   WE Y  A  + W   EV +  D   W+S   LTD+E+  +   L FFA+S+
Sbjct: 36  MFPIRYPRVWEMYKKAEASFWTAEEVDLSQDAKHWES---LTDNEKHFVSHVLAFFAASD 92

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD---EGELFNMYR 150
            +V  N+ +   + +  PE R +   Q   E +HS  +  ++ +   D   + +LFN   
Sbjct: 93  GIVLENLAVRFMKEIQIPEARAFYGFQIAIENIHSEMYSLLLETYIKDNEVKAKLFNAIE 152

Query: 151 EVPSITAKANWALQYTQTLSSPSF 174
            +P +  KA+WAL++    SS SF
Sbjct: 153 TIPCVAKKADWALRWID--SSQSF 174


>gi|313768358|ref|YP_004062038.1| hypothetical protein MpV1_155c [Micromonas sp. RCC1109 virus MpV1]
 gi|312599054|gb|ADQ91078.1| hypothetical protein MpV1_155c [Micromonas sp. RCC1109 virus MpV1]
          Length = 388

 Score = 77.4 bits (189), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 68/135 (50%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + PLKY   WE Y  A  ++W   EV +  D+  WK+   L D+E+  IK  L FFA S+
Sbjct: 86  VFPLKYPELWELYKKAQMSNWTAEEVDLSKDMDDWKT---LNDNEQKFIKYILAFFAGSD 142

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL---GLDEGELFNMYR 150
            +V  NI       +   E R +   Q+  E VH  T+  +I      G ++ +LF   +
Sbjct: 143 GIVFENINNNFADEVQISEARSFYAYQSHNEMVHGETYSKLIDKYIKDGAEKKQLFEAIQ 202

Query: 151 EVPSITAKANWALQY 165
            VP I  KANWAL++
Sbjct: 203 TVPCIERKANWALKW 217


>gi|242777635|ref|XP_002479074.1| ribonucleotide reductase small subunit RnrA, putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218722693|gb|EED22111.1| ribonucleotide reductase small subunit RnrA, putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 406

 Score = 77.4 bits (189), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 70/136 (51%), Gaps = 7/136 (5%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W+ Y  A  + W   E+ +  DL  W   N L DDER  + R L FFA+S+
Sbjct: 85  LFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWN--NRLNDDERYFVSRVLAFFAASD 142

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE----LFNMY 149
            +V  N+V      +  PE R +   Q   E +HS T+  +I +  ++E +    LF+  
Sbjct: 143 GIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTY-INEPKQRTYLFDAI 201

Query: 150 REVPSITAKANWALQY 165
             +P I  KA+WAL++
Sbjct: 202 DNIPCIRKKADWALRW 217


>gi|169779219|ref|XP_001824074.1| ribonucleoside-diphosphate reductase small chain [Aspergillus
           oryzae RIB40]
 gi|238499845|ref|XP_002381157.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           flavus NRRL3357]
 gi|83772813|dbj|BAE62941.1| unnamed protein product [Aspergillus oryzae]
 gi|220692910|gb|EED49256.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           flavus NRRL3357]
          Length = 405

 Score = 77.4 bits (189), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 70/141 (49%), Gaps = 5/141 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W+ Y  A  + W   E+ +  DL  W   N L DDER  I R L FFA+S+
Sbjct: 86  LFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWH--NRLNDDERFFISRVLAFFAASD 143

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N++      +  PE R +   Q   E +H+ T+  +I +   +  +   LF+   
Sbjct: 144 GIVNENLLERFSGEVQIPEARCFYGFQIMIENIHAETYSLLIDTYIKEPKQRTYLFDAID 203

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +P I  KA+WA+++ Q   S
Sbjct: 204 TIPCIRKKADWAIRWIQDQES 224


>gi|312216546|emb|CBX96496.1| similar to ribonucleoside-diphosphate reductase subunit M2
           [Leptosphaeria maculans]
          Length = 410

 Score = 77.4 bits (189), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 5/135 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W+ Y  A  + W   E+ +  DL  W  +  L DDER  I   L FFA+S+
Sbjct: 83  LFPIKYHDVWQMYKKAEASFWTAEEIDLSKDLHDWNKR--LNDDERFFISHVLAFFAASD 140

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +  PE R +   Q   E VHS T+  +I +   +  +   LFN   
Sbjct: 141 GIVNENLVERFSGEVQIPEARCFYGFQIMMENVHSETYSLLIDTYISEPRQRKYLFNAID 200

Query: 151 EVPSITAKANWALQY 165
            +P I  KA+WAL++
Sbjct: 201 NIPCIRKKADWALRW 215


>gi|146298285|ref|YP_001192876.1| ribonucleoside-diphosphate reductase [Flavobacterium johnsoniae
           UW101]
 gi|146152703|gb|ABQ03557.1| Ribonucleoside-diphosphate reductase [Flavobacterium johnsoniae
           UW101]
          Length = 325

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 68/140 (48%), Gaps = 5/140 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+K+   WE Y     + W   E+ +  DL  W +K  L DDER  IK  L FFA+S+
Sbjct: 17  IFPIKHHDIWEWYKKMEASFWTAEEIDLHQDLTDWNNK--LNDDERYFIKHILAFFAASD 74

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG---ELFNMYR 150
            +V  N+       +   E + +   Q   E +HS T+  +I +   DE    ELFN   
Sbjct: 75  GIVNENLAENFVNEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKDEAEKTELFNALE 134

Query: 151 EVPSITAKANWALQYTQTLS 170
             P+I  K  WAL++ ++ S
Sbjct: 135 VFPAIAKKGEWALKWIESDS 154


>gi|74025548|ref|XP_829340.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
 gi|70834726|gb|EAN80228.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
          Length = 337

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 6/154 (3%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L    D   + P+KY   W+KY  A ++ W   E+ + +D+  W+    L D ER 
Sbjct: 16  EEPLLTENPDRYVIFPIKYPDIWQKYKEAESSIWTVEEIDLGNDMTDWEK---LDDGERH 72

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            IK  L FFA+S+ +V  N+       +  PE R +   Q   E +H  T+  +I +  +
Sbjct: 73  FIKHVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHCETYSVLIDTYVV 132

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           D  E   L +  R +P I  KA WA+++  + +S
Sbjct: 133 DPDEKQRLLHAIRTIPCIEKKAKWAIEWIGSQTS 166


>gi|281204152|gb|EFA78348.1| ribonucleotide reductase-related protein [Polysphondylium pallidum
           PN500]
          Length = 323

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 5/154 (3%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L    D   L P+K+   W+ Y  A  + W   E+ +  DL  W+ K  L D+ER 
Sbjct: 4   EEPILKENKDRFVLFPIKHQDVWKFYKKAEASFWTAEEIDLAPDLRDWQDK--LNDNERY 61

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I   L FFA+S+ +V  N+       +  PE R +   Q   E +HS T+  +I +   
Sbjct: 62  FISNVLAFFAASDGIVNENLATRFMSEVQIPEARCFYGFQIAMENIHSETYSLLIDTYIQ 121

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           +  E   LFN    +P +  KANWAL++    +S
Sbjct: 122 NPAEKTKLFNAIETIPCVQKKANWALKWISNSTS 155


>gi|324519017|gb|ADY47264.1| Ribonucleoside-diphosphate reductase small chain [Ascaris suum]
          Length = 376

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 6/142 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+KY   W+ Y  A  + W   EV +  D   W++   L+D ER  I R L FFA+S+
Sbjct: 69  IFPIKYHDIWDFYKRAVASFWTVEEVDLSKDYQHWEN---LSDGERFFISRVLAFFAASD 125

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +  PE R +   Q   E +HS  +  ++ +   D+ E   LFN   
Sbjct: 126 GIVNENLVERFAQEVQVPEARFFYGFQIMIENIHSEMYSKMVETYIRDDNERKKLFNAIN 185

Query: 151 EVPSITAKANWALQYTQTLSSP 172
           E   I  KA+WAL++     +P
Sbjct: 186 EFEFIKKKADWALKWIADKQAP 207


>gi|124010268|ref|ZP_01694921.1| ribonucleoside-diphosphate reductase, beta subunit [Microscilla
           marina ATCC 23134]
 gi|123983653|gb|EAY24093.1| ribonucleoside-diphosphate reductase, beta subunit [Microscilla
           marina ATCC 23134]
          Length = 330

 Score = 77.4 bits (189), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 66/135 (48%), Gaps = 5/135 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++    W+ Y  A  + W   E+ +  DL  W  K  L DDER  I   L FFA+S+
Sbjct: 19  LFPIQQNDIWQMYKQAEASFWTAEEIDLAQDLKDWDEK--LNDDERHFITHVLAFFAASD 76

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+ +     + +PE R +   Q   E +H+ T+  +I +   D  E   LFN   
Sbjct: 77  GIVNENLAVNFLEEVKSPEARCFYGFQVAIENIHAETYSLLIDTYIKDADEKHRLFNALE 136

Query: 151 EVPSITAKANWALQY 165
            VP +  KA WAL++
Sbjct: 137 TVPCVKKKAEWALRW 151


>gi|328872436|gb|EGG20803.1| ribonucleotide reductase small subunit [Dictyostelium fasciculatum]
          Length = 335

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 71/145 (48%), Gaps = 5/145 (3%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +L    D   L P+KY   W  Y  A  + W   E+ +  D+  W++K  L D+ER  IK
Sbjct: 9   LLKENKDRFVLFPIKYTDIWNMYKKAEASFWTAEEIDLASDVNEWENK--LNDNERHFIK 66

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
             L FFA+S+ +V  N+       +  PE R +   Q   E +HS T+  +I +   +  
Sbjct: 67  NVLAFFAASDGIVNENLATKFMSEVQIPEARCFYGFQIAIENIHSETYSLLIDTYIKNPD 126

Query: 144 E---LFNMYREVPSITAKANWALQY 165
           E   LFN    +P +  KA+WAL++
Sbjct: 127 EKKVLFNAIETIPCVKKKADWALRW 151


>gi|71416121|ref|XP_810103.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma cruzi
           strain CL Brener]
 gi|70874586|gb|EAN88252.1| ribonucleoside-diphosphate reductase small chain, putative
           [Trypanosoma cruzi]
          Length = 337

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 6/154 (3%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L    D   + P+KY   W+KY  A ++ W   E+ +  DLA W+  N   + E+ 
Sbjct: 16  EEPLLRENPDRYVIFPIKYHDIWKKYKEAESSIWTVEEIDLSSDLADWEKMN---EGEKF 72

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            IK  L FFA+S+ +V  N+       +  PE R +   Q   E VHS T+  ++ +   
Sbjct: 73  FIKHVLAFFAASDGIVLENLAQRFMTEVQVPEVRCFYGFQIAIENVHSETYSVLLDTYIT 132

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           D  E   + +    +P I  KANWA+++ ++ SS
Sbjct: 133 DTEEKDRMLHAISTIPCIQKKANWAIRWIRSSSS 166


>gi|322817571|gb|EFZ25271.1| ribonucleoside-diphosphate reductase small chain, putative
           [Trypanosoma cruzi]
          Length = 337

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 6/154 (3%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L    D   + P+KY   W+KY  A ++ W   E+ +  DLA W+  N   + E+ 
Sbjct: 16  EEPLLRENPDRYVIFPIKYHDIWKKYKEAESSIWTVEEIDLSSDLADWEKMN---EGEKF 72

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            IK  L FFA+S+ +V  N+       +  PE R +   Q   E VHS T+  ++ +   
Sbjct: 73  FIKHVLAFFAASDGIVLENLAQRFMTEVQVPEVRCFYGFQIAIENVHSETYSVLLDTYIT 132

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           D  E   + +    +P I  KANWA+++ ++ SS
Sbjct: 133 DTEEKDRMLHAISTIPCIQKKANWAIRWIRSSSS 166


>gi|126662515|ref|ZP_01733514.1| ribonucleoside-diphosphate reductase 1, beta subunit [Flavobacteria
           bacterium BAL38]
 gi|126625894|gb|EAZ96583.1| ribonucleoside-diphosphate reductase 1, beta subunit [Flavobacteria
           bacterium BAL38]
          Length = 325

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 9/152 (5%)

Query: 24  MLNARSDVNQLLPLKYG--WAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           +L    D   + P+K+   W W K   AC   W   E+ +  DL  W +K  L DDE+  
Sbjct: 7   ILQENKDRFVIFPIKHQDIWEWYKKQEACI--WTAEEIDLHTDLNDWNNK--LNDDEKYF 62

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+       +  PE + +   Q   E +HS T+  +I +   D
Sbjct: 63  IKHILAFFAASDGIVNENLAENFVNEVQYPEAKFFYGFQIMMENIHSETYSLLIDTYVKD 122

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLS 170
           E E   LF+     P+I  KA WAL++ ++ S
Sbjct: 123 EVEKNKLFHAIETFPAIKEKAQWALKWIESDS 154


>gi|254456975|ref|ZP_05070403.1| ribonucleoside-diphosphate reductase, beta subunit
           [Campylobacterales bacterium GD 1]
 gi|207085767|gb|EDZ63051.1| ribonucleoside-diphosphate reductase, beta subunit
           [Campylobacterales bacterium GD 1]
          Length = 340

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 91/164 (55%), Gaps = 5/164 (3%)

Query: 14  EKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
           + + NV+D+++     + + +L  +KY WA+  +    NN W P EV M  D+  +K+  
Sbjct: 10  DSKENVNDRKVFGGDPTGIFELNNIKYQWAYNLWEVMLNNTWFPKEVDMTRDVNDYKN-- 67

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
            LT++E+    + L      +SL  NN++  +  ++++PE    L+RQ+FEEA+HS ++ 
Sbjct: 68  -LTENEKTAYDKALSQLIFMDSLQTNNLIDNVNPYVTSPEINLILVRQSFEEALHSQSYA 126

Query: 133 YIITSLGLDEGELFNMYREVPSITAKAN-WALQYTQTLSSPSFH 175
            ++ S+  +  E+++++R    +  K +  A  Y +  ++P+ H
Sbjct: 127 VMVDSISTNSAEIYDLWRRDMMLKGKNDAIARVYQELAANPTEH 170


>gi|15229476|ref|NP_189000.1| RNR2A (RIBONUCLEOTIDE REDUCTASE 2A); ribonucleoside-diphosphate
           reductase [Arabidopsis thaliana]
 gi|27735240|sp|P50651|RIR2A_ARATH RecName: Full=Ribonucleoside-diphosphate reductase small chain A;
           AltName: Full=Ribonucleoside-diphosphate reductase R2A
           subunit; Short=AtRNR2; Short=Protein R2at; AltName:
           Full=Ribonucleotide reductase small subunit A
 gi|13937232|gb|AAK50108.1|AF372971_1 AT3g23580/MDB19_7 [Arabidopsis thaliana]
 gi|9294514|dbj|BAB02776.1| ribonucleotide reductase [Arabidopsis thaliana]
 gi|23505945|gb|AAN28832.1| At3g23580/MDB19_7 [Arabidopsis thaliana]
          Length = 341

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 6/151 (3%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L A++    + P++Y   WE Y  A  + W   EV +  D+  W++   LTD E+ 
Sbjct: 18  EEPLLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWEA---LTDSEKH 74

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I   L FFA+S+ +V  N+       +  PE R +   Q   E +HS  +  ++ +   
Sbjct: 75  FISHILAFFAASDGIVLENLAARFLNDVQVPEARAFYGFQIAMENIHSEMYSLLLETFIK 134

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQT 168
           D  E   LFN    +P I+ KA W L + Q+
Sbjct: 135 DSKEKDRLFNAIETIPCISKKAKWCLDWIQS 165


>gi|78776214|ref|YP_392529.1| ribonucleotide-diphosphate reductase subunit beta [Sulfurimonas
           denitrificans DSM 1251]
 gi|78496754|gb|ABB43294.1| Ribonucleoside-diphosphate reductase [Sulfurimonas denitrificans
           DSM 1251]
          Length = 340

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 88/164 (53%), Gaps = 5/164 (3%)

Query: 14  EKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
           E   NV+D+R+     + + +L  +KY WA+  +    NN W P EV M  D++ +K   
Sbjct: 10  ESNENVNDRRIFGGNPTGIFELNDIKYQWAYNLWEMMLNNTWFPKEVDMTRDVSDYKQ-- 67

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
            +TD E+    + L      +SL  NNI+  I  ++++PE    L+RQA+EEA+HS ++ 
Sbjct: 68  -ITDVEKASYDKALAQLIFMDSLQTNNIMDNINPYVTSPEINLILVRQAYEEALHSQSYA 126

Query: 133 YIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLS-SPSFH 175
            ++ ++  +  E++ ++R    +  K +   +  + LS +P+ H
Sbjct: 127 VMVDTISTNSKEIYELWRRDMMLKGKNDAIARVYEELSKNPTEH 170


>gi|294659365|ref|XP_461732.2| DEHA2G04268p [Debaryomyces hansenii CBS767]
 gi|199433907|emb|CAG90185.2| DEHA2G04268p [Debaryomyces hansenii]
          Length = 426

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 5/135 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W+ Y  A  + W   E+ +  D   W  K  L ++ER  I R L FFA+S+
Sbjct: 114 LFPIKYHEIWQMYKKAEASFWTAEEIDLGKDTHDWNEK--LNNNERYFISRILAFFAASD 171

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +  PE + +   Q   E +HS T+  +I +   D  E   LFN   
Sbjct: 172 GIVNENLVENFSAEVQVPEAKCFYGFQIMMENIHSETYSLLIDTYIKDPKEADFLFNAID 231

Query: 151 EVPSITAKANWALQY 165
            +P I  KA+WAL++
Sbjct: 232 NIPCIKKKADWALRW 246


>gi|73974200|ref|XP_858061.1| PREDICTED: similar to ribonucleotide reductase M2 B (TP53
           inducible) isoform 3 [Canis familiaris]
          Length = 338

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 6/161 (3%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           E  V  D++ +L   S    + P++Y   W+ Y  A  + W   EV +  DL  W   N 
Sbjct: 24  ENEVKSDEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHW---NK 80

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           L  DE+  I   L FFA+S+ +V  N+V    + +  PE R +   Q   E VHS  +  
Sbjct: 81  LKSDEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSL 140

Query: 134 IITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           +I +   D  +   LFN    +P +  KA+WAL++ +   S
Sbjct: 141 LIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIEDRKS 181


>gi|297831106|ref|XP_002883435.1| RNR2/RNR2A [Arabidopsis lyrata subsp. lyrata]
 gi|297329275|gb|EFH59694.1| RNR2/RNR2A [Arabidopsis lyrata subsp. lyrata]
          Length = 341

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 6/148 (4%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +L A++    + P++Y   WE Y  A  + W   EV +  D+  W++   LTD E+  I 
Sbjct: 21  LLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWEA---LTDSEKHFIS 77

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
             L FFA+S+ +V  N+       +  PE R +   Q   E +HS  +  ++ +   D  
Sbjct: 78  HVLAFFAASDGIVLENLAARFLNDVQVPEARAFYGFQIAMENIHSEMYSLLLETFLKDSK 137

Query: 144 E---LFNMYREVPSITAKANWALQYTQT 168
           E   LFN    +P I+ KA W L + Q+
Sbjct: 138 EKDRLFNAIETIPCISKKAKWCLDWIQS 165


>gi|73974202|ref|XP_858105.1| PREDICTED: similar to ribonucleotide reductase M2 B (TP53
           inducible) isoform 4 [Canis familiaris]
          Length = 374

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 6/161 (3%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           E  V  D++ +L   S    + P++Y   W+ Y  A  + W   EV +  DL  W   N 
Sbjct: 24  ENEVKSDEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHW---NK 80

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           L  DE+  I   L FFA+S+ +V  N+V    + +  PE R +   Q   E VHS  +  
Sbjct: 81  LKSDEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSL 140

Query: 134 IITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           +I +   D  +   LFN    +P +  KA+WAL++ +   S
Sbjct: 141 LIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIEDRKS 181


>gi|224046583|ref|XP_002198998.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
          Length = 362

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 79/168 (47%), Gaps = 6/168 (3%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           +S   A E   ++D++ +L        + P++Y   W+ Y  A  + W   EV +  DL 
Sbjct: 28  MSSSSAAENGSDLDEEPLLRKNHRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLP 87

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            W   N L  DE+  I   L FFA+S+ +V  N+V    + +  PE R +   Q   E V
Sbjct: 88  HW---NKLKADEKYFISHVLAFFAASDGIVNENLVARFSQEVQIPEARCFYGFQILIENV 144

Query: 127 HSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           HS  +  +I +   D  +   LFN    +P +  KA+WAL++ +   S
Sbjct: 145 HSEMYSLLIDTYIKDPKKRDFLFNAIETMPCVKKKADWALKWIEDRES 192


>gi|255530602|ref|YP_003090974.1| Ribonucleoside-diphosphate reductase [Pedobacter heparinus DSM
           2366]
 gi|255343586|gb|ACU02912.1| Ribonucleoside-diphosphate reductase [Pedobacter heparinus DSM
           2366]
          Length = 324

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 6/154 (3%)

Query: 20  DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER 79
           +++ +L    D   LLP+KY   WE Y  +  + W   E+ + DD   W   + L D ER
Sbjct: 3   EEEVLLKENKDRFVLLPIKYPEIWEMYKKSEASFWTAEEIDLSDDQKHW---DNLNDGER 59

Query: 80  LMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
             I   L FF++S+ +V  N+ +     +  PE R +   Q   E +HS T+  +I +  
Sbjct: 60  HFISHILAFFSASDGIVNENLAVNFMSEVQLPEARCFYGFQIMMENIHSETYALLIDTYI 119

Query: 140 LDEGE---LFNMYREVPSITAKANWALQYTQTLS 170
            D  E   LF+    VP +  KA WAL++    S
Sbjct: 120 KDPDEKDRLFHAIETVPCVKKKAEWALRWIDNGS 153


>gi|73974198|ref|XP_539109.2| PREDICTED: similar to ribonucleotide reductase M2 B (TP53
           inducible) isoform 2 [Canis familiaris]
          Length = 351

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 6/161 (3%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           E  V  D++ +L   S    + P++Y   W+ Y  A  + W   EV +  DL  W   N 
Sbjct: 24  ENEVKSDEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHW---NK 80

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           L  DE+  I   L FFA+S+ +V  N+V    + +  PE R +   Q   E VHS  +  
Sbjct: 81  LKSDEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSL 140

Query: 134 IITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           +I +   D  +   LFN    +P +  KA+WAL++ +   S
Sbjct: 141 LIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIEDRKS 181


>gi|225684487|gb|EEH22771.1| ribonucleoside-diphosphate reductase small chain A
           [Paracoccidioides brasiliensis Pb03]
          Length = 413

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 69/141 (48%), Gaps = 5/141 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L PLKY   W+ Y  A  + W   E+ +  DL  W   N L DDER  I   L FFA+S+
Sbjct: 91  LFPLKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWN--NRLNDDERYFISHVLAFFAASD 148

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +  PE R +   Q   E +HS T+  +I +   +  +   LF+   
Sbjct: 149 GIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEPKQRTYLFDAID 208

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +P I  KA+WA+++ +   S
Sbjct: 209 TIPCIRKKADWAIRWIEDKES 229


>gi|228861726|ref|YP_002854746.1| Rr2 [Euproctis pseudoconspersa nucleopolyhedrovirus]
 gi|226425174|gb|ACO53586.1| Rr2 [Euproctis pseudoconspersa nucleopolyhedrovirus]
          Length = 339

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 76/138 (55%), Gaps = 5/138 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           +LP+++   W+ Y +A +  W   EV +  D   W++K  L +DER  +K  L FFAS++
Sbjct: 10  ILPIQHANLWKAYKTALDCVWKVEEVDLTKDWEDWQNK--LNEDERHFLKHILAFFASAD 67

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
           S+V  N++  +   ++  E R +  +Q F E VHS  +  +I     DE E   L N + 
Sbjct: 68  SIVNINLIDYVRGKVAELEARYFYDQQIFIENVHSEMYSLLIFEYIKDEQEKDTLLNAFN 127

Query: 151 EVPSITAKANWALQYTQT 168
           ++  +  KA WAL++T++
Sbjct: 128 DIECVRKKAQWALKWTES 145


>gi|326472581|gb|EGD96590.1| ribonucleotide reductase small subunit RnrA [Trichophyton tonsurans
           CBS 112818]
          Length = 408

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 5/141 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W+ Y  A  + W   E+ +  D+  W   N L DDER  I   L FFA+S+
Sbjct: 89  LFPIKYREIWQMYKKAEASFWTAEEIDLSKDIHDWN--NRLNDDERFFISHVLAFFAASD 146

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N++      +  PE R +   Q   E +HS T+  +I +   ++ +   LF    
Sbjct: 147 GIVNENLLERFSNEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEQKQRTYLFEAID 206

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +P I  KA+WA+++ Q  +S
Sbjct: 207 TIPCIRKKADWAIRWIQDKNS 227


>gi|327298815|ref|XP_003234101.1| ribonucleotide reductase small subunit RnrA [Trichophyton rubrum
           CBS 118892]
 gi|326464279|gb|EGD89732.1| ribonucleotide reductase small subunit RnrA [Trichophyton rubrum
           CBS 118892]
          Length = 408

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 5/141 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W+ Y  A  + W   E+ +  D+  W   N L DDER  I   L FFA+S+
Sbjct: 89  LFPIKYREIWQMYKKAEASFWTAEEIDLSKDIHDWN--NRLNDDERFFISHVLAFFAASD 146

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N++      +  PE R +   Q   E +HS T+  +I +   ++ +   LF    
Sbjct: 147 GIVNENLLERFSNEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEQKQRTYLFEAID 206

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +P I  KA+WA+++ Q  +S
Sbjct: 207 TIPCIRKKADWAIRWIQDKNS 227


>gi|156387375|ref|XP_001634179.1| predicted protein [Nematostella vectensis]
 gi|156221259|gb|EDO42116.1| predicted protein [Nematostella vectensis]
          Length = 384

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 6/154 (3%)

Query: 13  GEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
            + R N +D+ +L        +LP++Y   W+ Y  A  + W   EV +  D   +    
Sbjct: 56  AKSRFNTEDEPLLRENPHRFVILPIQYTEIWQMYKKAEASFWTAEEVDLSKDSHDFAK-- 113

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
            L D ER+ +   L FFA+S+ +V  N+V    + +  PE R +   Q   E +HS  + 
Sbjct: 114 -LNDHERMFVSHVLAFFAASDGIVNENLVECFCQEVQIPEARCFYGFQIAIENIHSEMYS 172

Query: 133 YIITSLGLDEGE---LFNMYREVPSITAKANWAL 163
            +I SL  D+ E   LFN    +P +  KA+WAL
Sbjct: 173 LLIESLIKDKAEKVNLFNAIETMPCVMKKAHWAL 206


>gi|319953269|ref|YP_004164536.1| ribonucleoside-diphosphate reductase [Cellulophaga algicola DSM
           14237]
 gi|319421929|gb|ADV49038.1| Ribonucleoside-diphosphate reductase [Cellulophaga algicola DSM
           14237]
          Length = 326

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 12/156 (7%)

Query: 24  MLNARSDVNQLLPLKYG--WAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           +L    D   + P+++   W W K   AC   W   E+ + +D   W +K  L DDER  
Sbjct: 7   ILQENKDRFVIFPIQHNDLWEWYKKQEAC--IWTAEEIDLSEDANDWNNK--LNDDERYF 62

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+       +   E + +   Q   E +HS T+  +I +   D
Sbjct: 63  IKHILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKD 122

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSF 174
           E E   LF      P+I  KA+WAL++   + SPSF
Sbjct: 123 EKEKTVLFQAIENFPAIKKKADWALKW---IDSPSF 155


>gi|302665732|ref|XP_003024474.1| hypothetical protein TRV_01368 [Trichophyton verrucosum HKI 0517]
 gi|291188529|gb|EFE43863.1| hypothetical protein TRV_01368 [Trichophyton verrucosum HKI 0517]
          Length = 529

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 5/141 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W+ Y  A  + W   E+ +  D+  W   N L DDER  I   L FFA+S+
Sbjct: 210 LFPIKYREIWQMYKKAEASFWTAEEIDLSKDIHDWN--NRLNDDERFFISHVLAFFAASD 267

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N++      +  PE R +   Q   E +HS T+  +I +   ++ +   LF    
Sbjct: 268 GIVNENLLERFSNEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEQKQRTYLFEAID 327

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +P I  KA+WA+++ Q   S
Sbjct: 328 TIPCIRKKADWAIRWIQDKDS 348


>gi|291388369|ref|XP_002710634.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like
           [Oryctolagus cuniculus]
          Length = 339

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 6/151 (3%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           N D++ +L   S    + P++Y   W+ Y  A  + W   EV +  DL  W   N LT D
Sbjct: 16  NEDEEPLLKKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHW---NRLTSD 72

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+  I   L FFA+S+ +V  N+V    + +  PE R +   Q   E VHS  +  +I +
Sbjct: 73  EKYFISHVLAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDT 132

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQY 165
              D  +   LFN    +P +  KA+WAL++
Sbjct: 133 YIRDPKKREFLFNAIETMPYVKKKADWALRW 163


>gi|305665630|ref|YP_003861917.1| putative ribonucleoside-diphosphate reductase small chain
           [Maribacter sp. HTCC2170]
 gi|88710386|gb|EAR02618.1| probable ribonucleoside-diphosphate reductase small chain
           [Maribacter sp. HTCC2170]
          Length = 328

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 12/156 (7%)

Query: 24  MLNARSDVNQLLPLKYG--WAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           +L    D   + P+++   W W K   AC   W   E+ +  DL  W +K  L DDE+  
Sbjct: 8   ILQENKDRFVIFPIQHHDLWEWYKKQEAC--IWTAEEIDLHQDLTDWNTK--LNDDEKYF 63

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+       +   E + +   Q   E +HS T+  +I +   D
Sbjct: 64  IKHILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKD 123

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSF 174
           + E   LF      P+I  KA+WAL++   + SPSF
Sbjct: 124 DKEKDILFKAIENFPAIKKKADWALKW---IESPSF 156


>gi|315041979|ref|XP_003170366.1| ribonucleoside-diphosphate reductase small subunit [Arthroderma
           gypseum CBS 118893]
 gi|311345400|gb|EFR04603.1| ribonucleoside-diphosphate reductase small subunit [Arthroderma
           gypseum CBS 118893]
          Length = 408

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 5/141 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W+ Y  A  + W   E+ +  D+  W   N L DDER  I   L FFA+S+
Sbjct: 89  LFPIKYREIWQMYKKAEASFWTAEEIDLSKDIHDWN--NRLNDDERFFISHVLAFFAASD 146

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N++      +  PE R +   Q   E +HS T+  +I +   ++ +   LF    
Sbjct: 147 GIVNENLLERFSNEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEQKQRTYLFEAID 206

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +P I  KA+WA+++ Q   S
Sbjct: 207 TIPCIRKKADWAIRWIQDKDS 227


>gi|300706309|ref|XP_002995432.1| hypothetical protein NCER_101672 [Nosema ceranae BRL01]
 gi|239604534|gb|EEQ81761.1| hypothetical protein NCER_101672 [Nosema ceranae BRL01]
          Length = 325

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 78/174 (44%), Gaps = 18/174 (10%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +LN   +   L P+KY   W+ Y  A ++ W   EV +  D   W S   L D ER  I 
Sbjct: 10  LLNPNEERYVLFPIKYHDIWQMYKKAESSFWTVEEVDLTADRNDWLS---LNDKERYFIS 66

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
             L FFA+S+ +V  N+V      ++  E + +   Q   E +HS  +  +I +   D+ 
Sbjct: 67  NILAFFAASDGIVNANLVERFANEVTILEAKCFYGFQVAIENIHSEMYSLLIDAYITDQD 126

Query: 144 E---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           E   LFN    +P I  KA+WAL+            W K  +S   TR + F C
Sbjct: 127 EKTHLFNAISTIPCIKKKADWALK------------WIKDEKSSFATRVIAFAC 168


>gi|149279601|ref|ZP_01885730.1| ribonucleoside-diphosphate reductase 1, beta subunit [Pedobacter
           sp. BAL39]
 gi|149229637|gb|EDM35027.1| ribonucleoside-diphosphate reductase 1, beta subunit [Pedobacter
           sp. BAL39]
          Length = 324

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 6/149 (4%)

Query: 20  DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER 79
           +++ +L    D   LLP+KY   WE Y  +  + W   E+ + DD   W   + L D ER
Sbjct: 3   EEEVLLKENKDRFVLLPIKYPEIWEMYKKSEASFWTAEEIDLSDDQKHW---DNLNDGER 59

Query: 80  LMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
             I   L FF++S+ +V  N+ +     +  PE R +   Q   E +HS T+  +I +  
Sbjct: 60  HFISHILAFFSASDGIVNENLAVNFMSEVQLPEARCFYGFQIMMENIHSETYALLIDTYI 119

Query: 140 LDEGE---LFNMYREVPSITAKANWALQY 165
            D  E   LF+    VP +  KA WAL++
Sbjct: 120 KDPEEKDRLFHAIETVPCVKKKAEWALRW 148


>gi|115387427|ref|XP_001211219.1| ribonucleoside-diphosphate reductase small chain [Aspergillus
           terreus NIH2624]
 gi|114195303|gb|EAU37003.1| ribonucleoside-diphosphate reductase small chain [Aspergillus
           terreus NIH2624]
          Length = 401

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 69/141 (48%), Gaps = 5/141 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W+ Y  A  + W   E+ +  DL  W   N L +DER  I   L FFA+S+
Sbjct: 84  LFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWN--NRLNEDERYFISHVLAFFAASD 141

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +  PE R +   Q   E +HS T+  +I +   +  +   LF+   
Sbjct: 142 GIVNENLVERFSGEVQIPEARCFYGFQIMIENIHSETYSLLIDTYIKEPKQRTYLFDAID 201

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +P I  KA+WA+++ Q   S
Sbjct: 202 NIPCIAKKADWAIKWIQDQES 222


>gi|149721713|ref|XP_001493623.1| PREDICTED: ribonucleotide reductase M2 B (TP53 inducible) [Equus
           caballus]
          Length = 351

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W+ Y  A  + W   EV +  DL  W   N LT DE+  I   L FFA+S+
Sbjct: 44  IFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHW---NKLTSDEKYFISHVLAFFAASD 100

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +  PE R +   Q   E VHS  +  +I +   D  +   LFN   
Sbjct: 101 GIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIE 160

Query: 151 EVPSITAKANWALQY 165
            +P +  KA+WALQ+
Sbjct: 161 TMPYVKKKADWALQW 175


>gi|299747484|ref|XP_001837064.2| ribonucleotide reductase small subunit [Coprinopsis cinerea
           okayama7#130]
 gi|298407540|gb|EAU84681.2| ribonucleotide reductase small subunit [Coprinopsis cinerea
           okayama7#130]
          Length = 379

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 75/163 (46%), Gaps = 6/163 (3%)

Query: 12  AGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSK 71
            GE  +   ++ +L        L P++Y   W  Y  A  + W   E+ +  D+  W   
Sbjct: 45  VGEVDLPESEEPLLKPSPKRLTLYPIQYPEIWTHYKRAQASFWTAEEIDLSHDMMDW--- 101

Query: 72  NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
           + LT+ ER  + R L FFASS+ +V  N+V      +  PE R +   Q   E VHS T+
Sbjct: 102 SKLTNAERHFLSRILAFFASSDGIVNENLVERFSSEVQVPEARCFYGFQVMIENVHSETY 161

Query: 132 QYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
             +I +   D  E   LF     +PSI  KA WAL +T   S+
Sbjct: 162 SLLIDTYIKDPEERDFLFRAIETIPSIQRKAEWALTWTSDKST 204


>gi|68485781|ref|XP_713171.1| hypothetical protein CaO19.9424 [Candida albicans SC5314]
 gi|68485874|ref|XP_713125.1| hypothetical protein CaO19.1868 [Candida albicans SC5314]
 gi|46434604|gb|EAK94008.1| hypothetical protein CaO19.1868 [Candida albicans SC5314]
 gi|46434651|gb|EAK94054.1| hypothetical protein CaO19.9424 [Candida albicans SC5314]
 gi|238883648|gb|EEQ47286.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
           albicans WO-1]
          Length = 394

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 5/138 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+KY   W+ Y  +  + W   E+ +  DL  W +K  + ++ER  I R L FFA+S+
Sbjct: 83  IYPIKYPELWQFYKKSLASFWTAEELDLSKDLDDWNNK--MNENERFFISRVLAFFAASD 140

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +  PE +     Q   E +HS T+  +I +   D  E   LFN   
Sbjct: 141 GIVNENLVENFCAEVQIPEAKSVYKFQIMMENIHSETYSLLIETYFKDPEEADFLFNAID 200

Query: 151 EVPSITAKANWALQYTQT 168
            +P I  KA+WA+++ Q+
Sbjct: 201 NIPFIRKKADWAIRWIQS 218


>gi|313213932|emb|CBY40745.1| unnamed protein product [Oikopleura dioica]
          Length = 418

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W  Y  A  + W   EV +  D+  WK    L  +E+  IK  L FFA+S+
Sbjct: 106 IFPIQYHDIWRMYKKAVASFWTTEEVDLGRDMDDWKK---LKKEEQFFIKHVLAFFAASD 162

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +  PE R +   Q   E +HS  +  +I +L  D  E   LFN   
Sbjct: 163 GIVNENLVDRFMSEIQIPEARSFYGFQIMMENIHSEMYAKLIENLVHDTKEKMGLFNAIE 222

Query: 151 EVPSITAKANWALQY 165
            +P+I  KA+WAL++
Sbjct: 223 TMPAIKKKADWALKW 237


>gi|290977320|ref|XP_002671386.1| predicted protein [Naegleria gruberi]
 gi|284084954|gb|EFC38642.1| predicted protein [Naegleria gruberi]
          Length = 338

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L PL+Y   WE Y  A  + W   EV +  D+  W +   LT +E+  IK  L FFA+S+
Sbjct: 31  LFPLEYPKIWEMYKKAMASFWTAEEVDLHTDITQWTT---LTPNEQHFIKSVLAFFAASD 87

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +  PE R +   Q   E +H+  +  +I +L  D+ E   LFN   
Sbjct: 88  GIVNENLCQQFMAEVQIPEARCFYGFQIAIENIHAEMYSTLIETLIKDQRERHRLFNAID 147

Query: 151 EVPSITAKANWALQY 165
            VPS+  KA WA+++
Sbjct: 148 TVPSVQKKARWAMKW 162


>gi|71648907|ref|XP_813233.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma cruzi
           strain CL Brener]
 gi|70878098|gb|EAN91382.1| ribonucleoside-diphosphate reductase small chain, putative
           [Trypanosoma cruzi]
          Length = 337

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 6/161 (3%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           E ++   ++ +L    D   + P+KY   W+KY  + ++ W   E+ +  DLA W+  N 
Sbjct: 9   EFQLQEQEEPLLRENPDRYVIFPIKYHDIWKKYKESESSIWTVEEIDLSSDLADWEKMN- 67

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
             + E+  IK  L FFA+S+ +V  N+       +  PE R +   Q   E VHS T+  
Sbjct: 68  --EGEKFFIKHVLAFFAASDGIVLENLAQRFMTEVQVPEVRCFYGFQIAIENVHSETYSV 125

Query: 134 IITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           ++ +   D  E   + +    +P I  KANWA+++ ++ SS
Sbjct: 126 LLDTYITDTEEKDRMLHAISTIPCIQKKANWAIRWIRSSSS 166


>gi|145553335|ref|XP_001462342.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124430181|emb|CAK94969.1| unnamed protein product [Paramecium tetraurelia]
          Length = 355

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 8/166 (4%)

Query: 5   TGLSPIQAGEKRVNVD--DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           T LS +QA +  +N +  D+ +L    +   L P+KY   W  Y     + W   E+ + 
Sbjct: 18  TPLSNVQASQTVLNQNYCDEPLLKQNPNRFVLFPIKYNDIWNMYKQHKASFWTAEEIDLY 77

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            DL  W+    LT DE+  IK  L FFA+S+ +V  N+       +  PE R +   Q  
Sbjct: 78  QDLKDWEK---LTADEKHFIKYVLAFFAASDGIVNENLAQQFCTEVQVPEARCFYGFQIA 134

Query: 123 EEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
            E +HS T+  +I +   DE E   L +    VP I  KA WA+++
Sbjct: 135 MENIHSETYSLLIDTYITDENEKNYLLHAIDNVPVIQKKAMWAMKW 180


>gi|47208564|emb|CAF96041.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 352

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 70/141 (49%), Gaps = 6/141 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W+ Y  A  + W   EV +  DLA W S   L  +E+  I   L FFA+S+
Sbjct: 17  IFPIQYPDIWKMYKQAQASFWTVEEVDLSKDLAHWDS---LKPEEKHFISHVLAFFAASD 73

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +  PE R +   Q   E+VHS  +  +I +   D  E   LFN   
Sbjct: 74  GIVNENLVQRFCQEVQVPEARSFYSYQVLIESVHSEMYSLLINTYIRDLKEREHLFNAIY 133

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +P +  KA+WALQ+    +S
Sbjct: 134 TMPCVKRKADWALQWINDSTS 154


>gi|302497417|ref|XP_003010709.1| hypothetical protein ARB_03411 [Arthroderma benhamiae CBS 112371]
 gi|291174252|gb|EFE30069.1| hypothetical protein ARB_03411 [Arthroderma benhamiae CBS 112371]
          Length = 408

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 5/141 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W+ Y  A  + W   E+ +  D+  W   N L DDER  I   L FFA+S+
Sbjct: 89  LFPIKYREIWQMYKKAEASFWTAEEIDLSKDIHDWN--NRLNDDERYFISHVLAFFAASD 146

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N++      +  PE R +   Q   E +HS T+  +I +   ++ +   LF    
Sbjct: 147 GIVNENLLERFSNEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEQKQRTYLFEAID 206

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +P I  KA+WA+++ Q   S
Sbjct: 207 TIPCIRKKADWAIRWIQDKDS 227


>gi|261335316|emb|CBH18310.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei gambiense DAL972]
          Length = 337

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 6/154 (3%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L    D   + P+KY   W+KY  A ++ W    + + +D+  W+    L D ER 
Sbjct: 16  EEPLLTENPDRYVIFPIKYPDIWQKYKKAESSIWTVENIYLGNDMTDWEK---LDDGERH 72

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            IK  L FFA+S+ +V  N+       +  PE R +   Q   E +HS T+  +I +  +
Sbjct: 73  FIKHVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHSETYSVLIDTYVV 132

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           D  E   L +  R +P I  KA WA+++  + +S
Sbjct: 133 DPDEKQRLLHAIRTIPCIEKKAKWAIEWIGSQTS 166


>gi|212533263|ref|XP_002146788.1| ribonucleotide reductase small subunit RnrA, putative [Penicillium
           marneffei ATCC 18224]
 gi|210072152|gb|EEA26241.1| ribonucleotide reductase small subunit RnrA, putative [Penicillium
           marneffei ATCC 18224]
          Length = 406

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 69/136 (50%), Gaps = 7/136 (5%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W+ Y  A  + W   E+ +  DL  W   N L DDER  I   L FFA+S+
Sbjct: 85  LFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWN--NRLNDDERYFISHVLAFFAASD 142

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE----LFNMY 149
            +V  N+V      +  PE R +   Q   E +HS T+  +I +  ++E +    LF+  
Sbjct: 143 GIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTY-INEPKQRTYLFDAI 201

Query: 150 REVPSITAKANWALQY 165
             +P I  KA+WAL++
Sbjct: 202 DNIPCIRKKADWALRW 217


>gi|314055235|ref|YP_004063573.1| ribonucleoside-diphosphate reductase small subunit-possible host
           origin [Ostreococcus tauri virus 2]
 gi|313575126|emb|CBI70139.1| ribonucleoside-diphosphate reductase small subunit-possible host
           origin [Ostreococcus tauri virus 2]
          Length = 408

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 6/140 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + PLKY   WE Y  A  ++W   EV +  DL  WK+   L ++E+  IK  L FFA S+
Sbjct: 105 VFPLKYPQLWELYKKAQMSNWTAEEVDLSKDLDDWKT---LNENEKKFIKYILAFFAGSD 161

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL---GLDEGELFNMYR 150
            +V  NI       +   E R +   Q   E VH  T+  +I      G ++ +LF   +
Sbjct: 162 GIVFENINNNFADEVQISEARSFYAYQCHNEMVHGETYSKLIDKYIKDGSEKKQLFEAIQ 221

Query: 151 EVPSITAKANWALQYTQTLS 170
            VP I  KA WA+++  T S
Sbjct: 222 TVPCIEKKAKWAMKWFDTKS 241


>gi|313235850|emb|CBY19835.1| unnamed protein product [Oikopleura dioica]
          Length = 382

 Score = 75.5 bits (184), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W  Y  A  + W   EV +  D+  WK    L  +E+  IK  L FFA+S+
Sbjct: 70  IFPIQYHDIWRMYKKAVASFWTTEEVDLGRDMDDWKK---LKKEEQFFIKHVLAFFAASD 126

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +  PE R +   Q   E +HS  +  +I +L  D  E   LFN   
Sbjct: 127 GIVNENLVDRFMSEIQIPEARSFYGFQIMMENIHSEMYAKLIENLVHDTKEKMGLFNAIE 186

Query: 151 EVPSITAKANWALQY 165
            +P+I  KA+WAL++
Sbjct: 187 TMPAIKKKADWALKW 201


>gi|237752265|ref|ZP_04582745.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           winghamensis ATCC BAA-430]
 gi|229376507|gb|EEO26598.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           winghamensis ATCC BAA-430]
          Length = 343

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 83/154 (53%), Gaps = 3/154 (1%)

Query: 18  NVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           +V+++R+     + + +L  +KY WA+  +     N W P EV M  D   +   +GLT 
Sbjct: 17  SVNERRIFGGNPTSIFELNKIKYQWAYNLWKVMLANSWFPEEVNMTQDKRDYS--DGLTP 74

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
           +E++   R L      +SL  NN++  +  ++++PE    L+RQAFEEA+HS ++  ++ 
Sbjct: 75  EEKIGYDRALAQLIFMDSLQTNNLIDNVNPYITSPEINLILVRQAFEEALHSQSYAVMVE 134

Query: 137 SLGLDEGELFNMYREVPSITAKANWALQYTQTLS 170
           S+  +  E++ M+R    + +K ++     + LS
Sbjct: 135 SISANTDEIYEMWRTDIQLKSKNDYIANVYEELS 168


>gi|291220709|ref|XP_002730368.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like
           [Saccoglossus kowalevskii]
          Length = 402

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 9/165 (5%)

Query: 5   TGLSPIQAGEKRV---NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           T + P++  +++    N +D+ +L        + P+KY   W+ Y  A  + W   EV +
Sbjct: 63  TDVEPVKLEKRKSKPQNNEDEPLLRDNPRRFVIFPIKYHDIWQMYKKAEASFWTAEEVDL 122

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             DLA W S   L DDER  I   L FFA+S+ +V  N+V    + +   E R +   Q 
Sbjct: 123 SKDLAHWAS---LKDDERHFISHVLAFFAASDGIVNENLVERFSQEIQVTEARCFYGFQI 179

Query: 122 FEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWAL 163
             E +HS  +  +I +   D  E   LFN    +P +  KA WAL
Sbjct: 180 AIENIHSEMYSLLIDTYIRDPQEREYLFNAIETLPPVKRKAQWAL 224


>gi|172448|gb|AAA34987.1| ribonucleotide reductase subunit 2 (RNR2) [Saccharomyces
           cerevisiae]
          Length = 399

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 5/147 (3%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +LN   +   L P+KY   W+ Y ++        E+ +  D+  W   N + ++ER  I 
Sbjct: 78  LLNEDKERTVLFPIKYHEIWQAYEASFWTAETAEEIDLSKDIHDWN--NRMNENERFFIS 135

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
           R L FFA+S+ +V  N+V      +  PE + +   Q   E +HS T+  +I +   D  
Sbjct: 136 RVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDPK 195

Query: 144 E---LFNMYREVPSITAKANWALQYTQ 167
           E   LFN    +P I  KA WAL++ Q
Sbjct: 196 ESEFLFNAIHTIPEIGEKAEWALRWIQ 222


>gi|310798394|gb|EFQ33287.1| ribonucleotide reductase [Glomerella graminicola M1.001]
          Length = 413

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 5/148 (3%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           D+ +L        L P+KY   W+ Y  A  + W   E+ +  DL  W +K  + +DE+ 
Sbjct: 79  DEPLLQENGQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNK--INEDEKY 136

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I   L FFA+S+ +V  N+V      +  PE R +   Q   E +HS T+  +I +   
Sbjct: 137 FISHILAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIK 196

Query: 141 DEGE---LFNMYREVPSITAKANWALQY 165
           +  +   LFN    +P I  KA+WAL++
Sbjct: 197 EPAQRTYLFNAIDTIPCIRKKADWALKW 224


>gi|91215505|ref|ZP_01252476.1| probable ribonucleoside-diphosphate reductase small chain
           [Psychroflexus torquis ATCC 700755]
 gi|91186457|gb|EAS72829.1| probable ribonucleoside-diphosphate reductase small chain
           [Psychroflexus torquis ATCC 700755]
          Length = 326

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 5/140 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+ +   WE Y     + W   E+ +Q D+  WK+K  L+ DE+  IK  L FFA+S+
Sbjct: 17  LFPITHPDIWEWYKKCEASFWTAEEIDLQQDITDWKTK--LSKDEQYFIKHILAFFAASD 74

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +   E + +   Q   E +HS T+  +I +   D+ E   LF    
Sbjct: 75  GIVNENLAENFVNEVQYTEAKFFYGFQIMVENIHSETYSLLIDTYVDDDKEKDLLFKAIE 134

Query: 151 EVPSITAKANWALQYTQTLS 170
             P+I  KA+WALQ+ ++ S
Sbjct: 135 NFPAIKKKADWALQWIESDS 154


>gi|242309209|ref|ZP_04808364.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pullorum MIT 98-5489]
 gi|239524250|gb|EEQ64116.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pullorum MIT 98-5489]
          Length = 341

 Score = 75.1 bits (183), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 86/157 (54%), Gaps = 4/157 (2%)

Query: 19  VDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           V+++++     + + +L  +KY WA+  +     N W P EV M  D   +   +GLT +
Sbjct: 16  VNERKIFGGNPTSIFELNKIKYQWAYNLWKVMLANSWFPEEVNMTQDKRDYA--DGLTPE 73

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E++   R L      +SL  NN++  +  ++++PE    L+RQAFEEA+HS ++  ++ S
Sbjct: 74  EKIGYDRALAQLIFMDSLQTNNLIDNVNPYITSPEINLILVRQAFEEALHSQSYAVMVES 133

Query: 138 LGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPS 173
           +  +  E++ M+R    + +K ++  + Y Q  ++P+
Sbjct: 134 ISANTDEIYEMWRTDMQLRSKNDYIAEVYEQLATNPT 170


>gi|11878241|gb|AAG40862.1| ribonucleotide reductase [Emericella nidulans]
          Length = 406

 Score = 75.1 bits (183), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 5/141 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W+ Y  A  + W   E+ +  DL  W   N L +DER  I R L FFA+S+
Sbjct: 86  LFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWN--NRLNEDERYFISRVLAFFAASD 143

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N++      +  PE R +   Q   E +H+ T+  +I +   +  +   LF+   
Sbjct: 144 GIVNENLLERFSGEVQIPEARCFYGFQIMIENIHAETYSLLIDTYIKEPKQRTYLFDAID 203

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +P I  KA+WA+++ Q   S
Sbjct: 204 TIPCIRKKADWAIKWIQDKES 224


>gi|67515571|ref|XP_657671.1| hypothetical protein AN0067.2 [Aspergillus nidulans FGSC A4]
 gi|40746089|gb|EAA65245.1| hypothetical protein AN0067.2 [Aspergillus nidulans FGSC A4]
 gi|259489743|tpe|CBF90266.1| TPA: Ribonucleotide reductase [Source:UniProtKB/TrEMBL;Acc:Q9HEW8]
           [Aspergillus nidulans FGSC A4]
          Length = 406

 Score = 75.1 bits (183), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 5/141 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W+ Y  A  + W   E+ +  DL  W   N L +DER  I R L FFA+S+
Sbjct: 86  LFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWN--NRLNEDERYFISRVLAFFAASD 143

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N++      +  PE R +   Q   E +H+ T+  +I +   +  +   LF+   
Sbjct: 144 GIVNENLLERFSGEVQIPEARCFYGFQIMIENIHAETYSLLIDTYIKEPKQRTYLFDAID 203

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +P I  KA+WA+++ Q   S
Sbjct: 204 TIPCIRKKADWAIKWIQDKES 224


>gi|301774462|ref|XP_002922647.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
           [Ailuropoda melanoleuca]
          Length = 387

 Score = 75.1 bits (183), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 6/161 (3%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           E     D++ +L   S    + P++Y   W+ Y  A  + W   EV +  DL  W   N 
Sbjct: 60  ENEAKSDEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHW---NK 116

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           L  DE+  I   L FFA+S+ +V  N+V    + +  PE R +   Q   E VHS  +  
Sbjct: 117 LKSDEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSL 176

Query: 134 IITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           +I +   D  +   LFN    +P +  KA+WAL++ +   S
Sbjct: 177 LIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIEDRKS 217


>gi|281200507|gb|EFA74725.1| ribonucleotide reductase small subunit [Polysphondylium pallidum
           PN500]
          Length = 335

 Score = 75.1 bits (183), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 5/145 (3%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +L    D   L P+KY   W+ Y  A  + W   E+ +  D+  W++K  L D+ER  I 
Sbjct: 9   ILKENKDRFVLFPIKYADIWQMYKKAEASFWTAEEIDLAGDIGDWENK--LNDNERHFIT 66

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD-- 141
             L FFA+S+ +V  N+       +  PE R +   Q   E +HS T+  +I +   D  
Sbjct: 67  NVLAFFAASDGIVNENLATKFMSEVQIPEARCFYGFQIAIENIHSETYSLLIDTYIKDSE 126

Query: 142 -EGELFNMYREVPSITAKANWALQY 165
            +  +F+    +P++  KA+WAL++
Sbjct: 127 TKRNIFHAIDTIPAVKKKADWALRW 151


>gi|156839886|ref|XP_001643629.1| hypothetical protein Kpol_478p6 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114248|gb|EDO15771.1| hypothetical protein Kpol_478p6 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 394

 Score = 74.7 bits (182), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 13/162 (8%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           L  ++  E  +N D  R++        + P++Y   +E Y  A  + W   E+ +  DL+
Sbjct: 62  LKEMEKNEPLLNEDKNRLI--------MHPIRYPDIYEAYKKAEASFWTAEEIDLSKDLS 113

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            W  K  L  +ER  I R L FFA+S+ +V  N+       +  PE R +   Q   E +
Sbjct: 114 DWNDK--LNSNERFFISRVLAFFAASDGIVNENLTENFSVEVKVPEARCFYGFQIMIENI 171

Query: 127 HSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
           HS T+  +I +   D  E   LFN    +P I  KA WAL++
Sbjct: 172 HSETYSLLIDTYIKDPKESDFLFNAIDYIPQIKEKAEWALRW 213


>gi|224100309|ref|XP_002311826.1| predicted protein [Populus trichocarpa]
 gi|222851646|gb|EEE89193.1| predicted protein [Populus trichocarpa]
          Length = 342

 Score = 74.7 bits (182), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 8/159 (5%)

Query: 15  KRVNVDDKR--MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
           +R+  +DK+  +L  ++    + P++Y   WE Y  A  + W   EV +  D+  W++  
Sbjct: 11  ERIREEDKQEPILKEQNQRFCMFPIRYKELWEMYKKAEASFWTAEEVDLSRDMQQWEA-- 68

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
            L+D E+  I   L FFA+S+ +V  N+       +  PE R +   Q   E +HS  + 
Sbjct: 69  -LSDSEKHFISHVLAFFAASDGIVLENLAARFLYDVQIPEARAFYGFQIAMENIHSEMYS 127

Query: 133 YIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQT 168
            ++ +   D  E   LFN    +P +  KA WAL + Q+
Sbjct: 128 LLLETYIKDSREKHRLFNAIENIPCVAEKAKWALDWIQS 166


>gi|281340156|gb|EFB15740.1| hypothetical protein PANDA_011632 [Ailuropoda melanoleuca]
          Length = 336

 Score = 74.7 bits (182), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 6/161 (3%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           E     D++ +L   S    + P++Y   W+ Y  A  + W   EV +  DL  W   N 
Sbjct: 9   ENEAKSDEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHW---NK 65

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           L  DE+  I   L FFA+S+ +V  N+V    + +  PE R +   Q   E VHS  +  
Sbjct: 66  LKSDEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSL 125

Query: 134 IITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           +I +   D  +   LFN    +P +  KA+WAL++ +   S
Sbjct: 126 LIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIEDRKS 166


>gi|289177074|ref|NP_001165948.1| ribonucleoside-diphosphate reductase subunit M2 B isoform 2 [Homo
           sapiens]
          Length = 423

 Score = 74.7 bits (182), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 6/165 (3%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
             G S     E  +  +++ +L   S    + P++Y   W+ Y  A  + W   EV +  
Sbjct: 86  QAGRSSSDTNESEIKSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSK 145

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           DL  W   N L  DE+  I   L FFA+S+ +V  N+V    + +  PE R +   Q   
Sbjct: 146 DLPHW---NKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILI 202

Query: 124 EAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
           E VHS  +  +I +   D  +   LFN    +P +  KA+WAL++
Sbjct: 203 ENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRW 247


>gi|89890041|ref|ZP_01201552.1| ribonucleoside-diphosphate reductase small chain [Flavobacteria
           bacterium BBFL7]
 gi|89518314|gb|EAS20970.1| ribonucleoside-diphosphate reductase small chain [Flavobacteria
           bacterium BBFL7]
          Length = 330

 Score = 74.7 bits (182), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 77/156 (49%), Gaps = 12/156 (7%)

Query: 24  MLNARSDVNQLLPLKYG--WAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           +L    D   + P+++   W W K   AC   W   E+ +Q D+  W+  N L  DER  
Sbjct: 8   ILQENPDRFVIFPIQHDDLWEWYKKQQAC--IWTAEEIDLQVDITDWQ--NSLNSDERYF 63

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+       +   E + +   Q   E +HS T+  +I +   D
Sbjct: 64  IKHILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKD 123

Query: 142 EGELFNMYREV---PSITAKANWALQYTQTLSSPSF 174
           + E   ++R +   P+I  KA+WA+++   + SPSF
Sbjct: 124 DAEKDQLFRAIENFPAIKLKADWAMKW---IESPSF 156


>gi|290343623|ref|YP_003494990.1| hypothetical protein OTV1_151 [Ostreococcus tauri virus 1]
 gi|260161038|emb|CAY39739.1| hypothetical protein OTV1_151 [Ostreococcus tauri virus 1]
          Length = 389

 Score = 74.3 bits (181), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 67/140 (47%), Gaps = 6/140 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + PLKY   WE Y  A  ++W   EV +  DL  WK+   L ++E+  IK  L FFA S+
Sbjct: 86  VFPLKYPHLWELYKKAQMSNWTAEEVDLSKDLDDWKT---LNENEQKFIKYILAFFAGSD 142

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD---EGELFNMYR 150
            +V  NI       +   E R +   Q   E VH  T+  +I     D   + ELF   +
Sbjct: 143 GIVFENINNNFADEVQISEARSFYAYQCHNEMVHGETYSKLIDKYIKDPSEKKELFEAIQ 202

Query: 151 EVPSITAKANWALQYTQTLS 170
            VP I  KA WA+++  T S
Sbjct: 203 TVPCIEKKAQWAMKWFDTKS 222


>gi|163955147|ref|YP_001648251.1| hypothetical protein OsV5_174r [Ostreococcus virus OsV5]
 gi|163638596|gb|ABY27955.1| hypothetical protein OsV5_174r [Ostreococcus virus OsV5]
          Length = 322

 Score = 74.3 bits (181), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 67/140 (47%), Gaps = 6/140 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + PLKY   WE Y  A  ++W   EV +  DL  WK+   L ++E+  IK  L FFA S+
Sbjct: 19  VFPLKYPHLWELYKKAQMSNWTAEEVDLSKDLDDWKT---LNENEQKFIKYILAFFAGSD 75

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD---EGELFNMYR 150
            +V  NI       +   E R +   Q   E VH  T+  +I     D   + ELF   +
Sbjct: 76  GIVFENINNNFADEVQISEARSFYAYQCHNEMVHGETYSKLIDKYIKDPSEKKELFEAIQ 135

Query: 151 EVPSITAKANWALQYTQTLS 170
            VP I  KA WA+++  T S
Sbjct: 136 TVPCIEKKAQWAMKWFDTKS 155


>gi|115378653|ref|ZP_01465803.1| ribonucleoside-diphosphate reductase, beta subunit [Stigmatella
           aurantiaca DW4/3-1]
 gi|115364319|gb|EAU63404.1| ribonucleoside-diphosphate reductase, beta subunit [Stigmatella
           aurantiaca DW4/3-1]
          Length = 288

 Score = 74.3 bits (181), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 9/102 (8%)

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           +TD ER +I R + FFA+ +S+V NN+VL +Y+HL+ PE R YL RQ +EEA+H    Q+
Sbjct: 1   MTDAERHLIHRLVAFFATGDSIVGNNLVLNLYKHLNAPEARMYLSRQLYEEALHV---QF 57

Query: 134 IITSLGL------DEGELFNMYREVPSITAKANWALQYTQTL 169
            +T L        D  + F     +PSI  KA + L++  ++
Sbjct: 58  YLTLLDTYVPDPADRAKAFAAIDNIPSIQRKARFCLKWMDSI 99


>gi|120437796|ref|YP_863482.1| ribonucleoside-diphosphate reductase small chain [Gramella forsetii
           KT0803]
 gi|117579946|emb|CAL68415.1| ribonucleoside-diphosphate reductase small chain [Gramella forsetii
           KT0803]
          Length = 325

 Score = 73.9 bits (180), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 76/152 (50%), Gaps = 9/152 (5%)

Query: 24  MLNARSDVNQLLPLKYG--WAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           +L    D   + P+K+   W W K + AC   W   E+ + +DL+ W +K  L+ DER  
Sbjct: 7   ILQENKDRFVIFPIKHHDIWDWYKKMEAC--FWTAEEIDLHEDLSDWNNK--LSADERYF 62

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           +K  L FFA+S+ +V  N+       +   E + +   Q   E +HS T+  +I +   +
Sbjct: 63  LKHILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKN 122

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLS 170
           E E   LF      P+I  KA+WAL++ ++ S
Sbjct: 123 EKEKDQLFKAIEVFPAIKKKADWALKWIESDS 154


>gi|18859327|ref|NP_571525.1| ribonucleoside-diphosphate reductase subunit M2 [Danio rerio]
 gi|292624782|ref|XP_002665783.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Danio rerio]
 gi|3914657|sp|P79733|RIR2_DANRE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase protein R2 class
           I; AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|1695831|gb|AAB37103.1| ribonucleotide reductase protein R2 class I [Danio rerio]
 gi|27881838|gb|AAH44355.1| Ribonucleotide reductase M2 polypeptide [Danio rerio]
 gi|56207929|emb|CAI21240.1| ribonucleotide reductase M2 polypeptide [Danio rerio]
 gi|182889152|gb|AAI64707.1| Rrm2 protein [Danio rerio]
          Length = 386

 Score = 73.9 bits (180), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 6/158 (3%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
           Q+  K+  V+++ +L        + P++Y   W+ Y  A  + W   EV +  DL  W S
Sbjct: 56  QSKAKKGAVEEEPLLKENPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWDS 115

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              L D+ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  
Sbjct: 116 ---LKDEERYFISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEM 172

Query: 131 FQYIITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
           +  +I +   D  E   LFN    +P +  KA+WAL +
Sbjct: 173 YSLLIDTYIKDSKEREFLFNAIETMPCVKKKADWALNW 210


>gi|255724924|ref|XP_002547391.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
           tropicalis MYA-3404]
 gi|240135282|gb|EER34836.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
           tropicalis MYA-3404]
          Length = 387

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 5/137 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+KY   W  Y  +  + W   E+ +  D   W++K  +  DER  I R L FFA+S+
Sbjct: 76  VFPIKYPEIWTFYKKSVASFWTAEEIDLSKDFDDWENK--MNKDERFFISRVLAFFAASD 133

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +  PE +     Q   E +HS T+  +I +   D  E   LFN   
Sbjct: 134 GIVNENLVENFCTEVKLPEAKSVYKFQIMMENIHSETYSLLIETYFKDPKEADFLFNAID 193

Query: 151 EVPSITAKANWALQYTQ 167
            +  I  KA+WA+++ Q
Sbjct: 194 NIKYIGEKADWAIRWIQ 210


>gi|49899161|gb|AAH75746.1| Ribonucleotide reductase M2 polypeptide [Danio rerio]
          Length = 386

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 6/158 (3%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
           Q+  K+  V+++ +L        + P++Y   W+ Y  A  + W   EV +  DL  W S
Sbjct: 56  QSKAKKGAVEEEPLLKENPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWDS 115

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              L D+ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  
Sbjct: 116 ---LKDEERYFISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEM 172

Query: 131 FQYIITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
           +  +I +   D  E   LFN    +P +  KA+WAL +
Sbjct: 173 YSLLIDTYIKDSKEREFLFNAIETMPCVKKKADWALNW 210


>gi|46446983|ref|YP_008348.1| ribonucleoside-diphosphate reductase small chain [Candidatus
           Protochlamydia amoebophila UWE25]
 gi|46400624|emb|CAF24073.1| probable ribonucleoside-diphosphate reductase small chain
           [Candidatus Protochlamydia amoebophila UWE25]
          Length = 323

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 5/145 (3%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +L    D   L P+ +   W+ Y  A  + W   E+ +  DL  W  K  L +DE+  IK
Sbjct: 7   ILRENKDRFVLFPINHAEIWQMYKKAEASFWTAEEIDLTSDLLDWDRK--LNNDEKYFIK 64

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL---GL 140
             L FFA+S+ +V  N+ +     +  PE R +   Q   E +HS  +  +I +      
Sbjct: 65  HILAFFAASDGIVNENLAVNFMSEVQYPEARCFYGFQIMMENIHSEAYSLLIDTYIKDPT 124

Query: 141 DEGELFNMYREVPSITAKANWALQY 165
           D+  LF     +P I+ KA+WAL++
Sbjct: 125 DKNRLFKALETIPCISNKADWALRW 149


>gi|324525159|gb|ADY48515.1| Ribonucleoside-diphosphate reductase small chain [Ascaris suum]
          Length = 240

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 67/142 (47%), Gaps = 6/142 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+KY   W  Y +A  + W   E+ +  D A W+    LTD ER  I R L FFA+S+
Sbjct: 23  IFPIKYHDIWAFYKNAVASFWTADEIDLSRDYADWEK---LTDGERFFISRVLSFFAASD 79

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL---FNMYR 150
            +V  N+       +  PE R +   Q   E VHS  +  +I +   D  E    F+   
Sbjct: 80  GIVNENLTGRFSTEVQVPEARFFYGFQIMMEGVHSEMYSKMIEAYIKDPKEQMVHFDAIH 139

Query: 151 EVPSITAKANWALQYTQTLSSP 172
           +   I  KA+WAL++    +SP
Sbjct: 140 QFECIKKKADWALRWIDDRNSP 161


>gi|301166951|emb|CBW26530.1| putative ribonucleoside-diphosphate reductase small chain subunit
           [Bacteriovorax marinus SJ]
          Length = 322

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 6/148 (4%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +L    D   L PLKY   +E Y +     W   E+    D+  W+    L  DE+  IK
Sbjct: 4   ILAPNDDRFVLFPLKYHSIFEMYKNHMAVFWTADELDFASDITDWEK---LNKDEQHFIK 60

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD-- 141
             L FFA+S+ +V  N+ L  Y  +  PE R +   Q   E +HS T+  +I +   D  
Sbjct: 61  HILAFFAASDGIVNENLALRFYNDVQIPEARCFYGFQIAMENIHSETYSLLIDTYVKDPK 120

Query: 142 -EGELFNMYREVPSITAKANWALQYTQT 168
            + ELF+     P +  KA+WA+++ Q+
Sbjct: 121 EKDELFHAVTHFPFVEKKADWAMKWMQS 148


>gi|124808087|ref|XP_001348226.1| ribonucleotide reductase small subunit [Plasmodium falciparum 3D7]
 gi|23497116|gb|AAN36665.1|AE014816_50 ribonucleotide reductase small subunit [Plasmodium falciparum 3D7]
          Length = 349

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 10/168 (5%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
            S +Q G K +N   +++LN  SD   L P+ Y   W+ Y  A  + W   E+ +  DL 
Sbjct: 20  FSDLQKG-KEIN---EKILNKESDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDL- 74

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
             K    L ++E+  IK  L FFA+S+ +V  N+     R +   E +++   Q   E +
Sbjct: 75  --KDFEKLNENEKHFIKHVLAFFAASDGIVLENLASKFLREVQITEAKKFYSFQIAVENI 132

Query: 127 HSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           HS T+  +I +   DE E   LF+    +P++  KA WA ++    +S
Sbjct: 133 HSETYSLLIDNYIKDEKERLNLFHAIENIPAVKNKALWAAKWINDTNS 180


>gi|307719930|ref|YP_003891070.1| Ribonucleoside-diphosphate reductase [Sulfurimonas autotrophica DSM
           16294]
 gi|306978023|gb|ADN08058.1| Ribonucleoside-diphosphate reductase [Sulfurimonas autotrophica DSM
           16294]
          Length = 340

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 75/134 (55%), Gaps = 4/134 (2%)

Query: 18  NVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           NV+D+++     + + +L  +KY WA+  +    NN W P EV M  D+  +K    LTD
Sbjct: 14  NVNDRKVFGGNPTGIFELNNIKYQWAYNLWEMMLNNTWFPKEVDMTRDVNDYKQ---LTD 70

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
            E+    + L      +SL  NN++  +  +++ PE    L+RQ+FEEA+HS ++  ++ 
Sbjct: 71  AEKTAYDKALSQLIFMDSLQTNNLIDNVNPYVTAPEINLILVRQSFEEALHSQSYAVMVD 130

Query: 137 SLGLDEGELFNMYR 150
           S+  +  E+++++R
Sbjct: 131 SISTNSEEIYDLWR 144


>gi|119478853|ref|XP_001259462.1| ribonucleotide reductase small subunit RnrA, putative [Neosartorya
           fischeri NRRL 181]
 gi|119407616|gb|EAW17565.1| ribonucleotide reductase small subunit RnrA, putative [Neosartorya
           fischeri NRRL 181]
          Length = 405

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 5/135 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W+ Y  A  + W   E+ +  DL  W   N L DDER  I   L FFA+S+
Sbjct: 85  LFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWN--NRLNDDERYFISHVLAFFAASD 142

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N++      +  PE R +   Q   E +HS T+  +I +   +  +   LF+   
Sbjct: 143 GIVNENLLERFSNEVQVPEARCFYGFQIMIENIHSETYSLLIDTYIKEPKQRTYLFDAID 202

Query: 151 EVPSITAKANWALQY 165
            +P I  KA WA+++
Sbjct: 203 TIPCIAKKAQWAMRW 217


>gi|121713826|ref|XP_001274524.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           clavatus NRRL 1]
 gi|119402677|gb|EAW13098.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           clavatus NRRL 1]
          Length = 405

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 5/135 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W+ Y  A  + W   E+ +  DL  W   N L DDER  I   L FFA+S+
Sbjct: 85  LFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWN--NRLNDDERYFISHVLAFFAASD 142

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N++      +  PE R +   Q   E +HS T+  +I +   +  +   LF+   
Sbjct: 143 GIVNENLLERFSNEVQVPEARCFYGFQIMIENIHSETYSLLIDTYIKEPKQRAYLFDAID 202

Query: 151 EVPSITAKANWALQY 165
            +P I  KA WA+++
Sbjct: 203 TIPCINKKAQWAMRW 217


>gi|1710398|sp|P50650|RIR2_PLAF4 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase R2 subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|555613|gb|AAA50170.1| ribonucleotide reductase small subunit [Plasmodium falciparum]
          Length = 349

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 10/168 (5%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
            S +Q G K +N   +++LN  SD   L P+ Y   W+ Y  A  + W   E+ +  DL 
Sbjct: 20  FSDLQKG-KEIN---EKILNKESDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDL- 74

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
             K    L ++E+  IK  L FFA+S+ +V  N+     R +   E +++   Q   E +
Sbjct: 75  --KDFEKLNENEKHFIKHVLAFFAASDGIVLENLASKFLREVQITEAKKFYSFQIAVENI 132

Query: 127 HSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           HS T+  +I +   DE E   LF+    +P++  KA WA ++    +S
Sbjct: 133 HSETYSLLIDNYIKDEKERLNLFHAIENIPAVKNKALWAAKWINDTNS 180


>gi|169613737|ref|XP_001800285.1| hypothetical protein SNOG_10001 [Phaeosphaeria nodorum SN15]
 gi|111061216|gb|EAT82336.1| hypothetical protein SNOG_10001 [Phaeosphaeria nodorum SN15]
          Length = 409

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 68/136 (50%), Gaps = 6/136 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W+ Y  A  + W   E+ +  DL  W  +  L DDER  I   L FFA+S+
Sbjct: 83  LFPIKYHDVWQMYKKAEASFWTAEEIDLSKDLHDWNKR--LNDDERFFISHVLAFFAASD 140

Query: 94  SLVANNIVLAIY-RHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMY 149
            +V  N+V   +   +  PE R +   Q   E +HS T+  +I +   +  +   LFN  
Sbjct: 141 GIVNENLVDERFSSEVQIPEARCFYGFQIMMENIHSETYSLLIDTYISEPRQRTYLFNAI 200

Query: 150 REVPSITAKANWALQY 165
             +P I  KA+WAL++
Sbjct: 201 DNIPCIRKKADWALKW 216


>gi|39977011|ref|XP_369893.1| hypothetical protein MGG_06408 [Magnaporthe oryzae 70-15]
 gi|145016179|gb|EDK00669.1| hypothetical protein MGG_06408 [Magnaporthe oryzae 70-15]
          Length = 403

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 17/155 (10%)

Query: 41  WAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNI 100
           + W+ Y  A  + W   E+ +  DL  W +K  LTDDE+  I   L FFA+S+ +V  N+
Sbjct: 84  FVWQMYKKAEASFWTAEEIDLSKDLHDWNNK--LTDDEKYFISHILAFFAASDGIVNENL 141

Query: 101 VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITA 157
           V      +  PE R +   Q   E +HS T+  +I +   +  +   LFN    +P I  
Sbjct: 142 VERFSAEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIKETAQRTYLFNAIDTIPCIRK 201

Query: 158 KANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           KA+WAL+            W   ++S   TR + F
Sbjct: 202 KADWALR------------WITDKKSTFATRLIAF 224


>gi|324509007|gb|ADY43795.1| Ribonucleoside-diphosphate reductase small chain [Ascaris suum]
          Length = 337

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 67/142 (47%), Gaps = 6/142 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+KY   W  Y +A  + W   E+ +  D A W+    LTD ER  I R L FFA+S+
Sbjct: 30  IFPIKYHDIWAFYKNAVASFWTADEIDLSRDYADWEK---LTDGERFFISRVLSFFAASD 86

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL---FNMYR 150
            +V  N+       +  PE R +   Q   E VHS  +  +I +   D  E    F+   
Sbjct: 87  GIVNENLTGRFSTEVQVPEARFFYGFQIMMEGVHSEMYSKMIEAYIKDPKEQMVHFDAIH 146

Query: 151 EVPSITAKANWALQYTQTLSSP 172
           +   I  KA+WAL++    +SP
Sbjct: 147 QFECIKKKADWALRWIDDRNSP 168


>gi|6525234|gb|AAF15363.1|AF205376_1 ribonucleotide reductase R2 subunit [Plasmodium falciparum]
          Length = 320

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 6/153 (3%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           +R+LN  SD   L P+ Y   W+ Y  A  + W   E+ +  DL   K    L ++E+  
Sbjct: 2   RRILNKESDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDL---KDFEKLNENEKHF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+     R +   E +++   Q   E +HS T+  +I +   D
Sbjct: 59  IKHVLAFFAASDGIVLENLASKFLREVQITEAKKFYSFQIAVENIHSETYSLLIDNYIKD 118

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           E E   LF+    +P++  KA WA ++    +S
Sbjct: 119 EKERLNLFHAIENIPAVKNKALWAAKWINDTNS 151


>gi|321476700|gb|EFX87660.1| hypothetical protein DAPPUDRAFT_306462 [Daphnia pulex]
          Length = 378

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 79/176 (44%), Gaps = 10/176 (5%)

Query: 4   NTGLSPIQAGEKRVNVDD----KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEV 59
           N   + +   EK V V D    + +L +      L P++Y   W+ Y  A  + W   EV
Sbjct: 35  NVSPTKLTTVEKSVQVRDNDQNEPLLRSNPSRFVLFPIQYHDIWQMYKKAEASFWTAEEV 94

Query: 60  PMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLR 119
            +  DL  W   + L  +ER  +   L FFA+S+ +V  N+V    + +  PE R +   
Sbjct: 95  DLSKDLKDW---DNLQPNERHFVSHVLAFFAASDGIVNENLVERFAQEVQVPEARCFYGF 151

Query: 120 QAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSP 172
           Q   E +HS  +  +I +   D  E   LFN    +P I  KA WA+++     +P
Sbjct: 152 QIAMENIHSEMYSLLIETYIKDSAERTRLFNAVETMPCIAKKAEWAMKWIGNKDAP 207


>gi|126322530|ref|XP_001380256.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 361

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W+ Y  A  + W   EV +  DL  W   N L  DE+  I   L FFA+S+
Sbjct: 54  IFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHW---NKLKSDEKYFISHILAFFAASD 110

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +  PE R +   Q   E +HS  +  +I +   D  +   LFN   
Sbjct: 111 GIVNENLVERFSQEVQVPEARCFYGFQILIENIHSEMYSLLIDTYIKDPQKREFLFNAIE 170

Query: 151 EVPSITAKANWALQY 165
            +P +  KA+WALQ+
Sbjct: 171 TMPCVKRKADWALQW 185


>gi|209170936|ref|YP_002268082.1| agip52 [Agrotis ipsilon multiple nucleopolyhedrovirus]
 gi|208436527|gb|ACI28754.1| ribonucleotide reductase-2B [Agrotis ipsilon multiple
           nucleopolyhedrovirus]
          Length = 313

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 5/138 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+ +   W  Y  A +  W   EV M  D   ++SK  L DDER  IK  L FFA+++
Sbjct: 8   LKPILHDDLWAAYKQAFDCMWKVEEVDMSRDYDDFESK--LNDDERYFIKHVLAFFAAAD 65

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
           S+V  N++  + R++   E + +   Q   E VH+  +  +I  L  DE E   L N + 
Sbjct: 66  SIVNINLIEYMQRNVPELEAQYFYNLQVLIECVHTEMYNLLIEQLIKDEHERDTLLNAFE 125

Query: 151 EVPSITAKANWALQYTQT 168
            VP +  KA WA+++ ++
Sbjct: 126 HVPCVRKKAQWAMKWIES 143


>gi|70997335|ref|XP_753417.1| ribonucleotide reductase small subunit RnrA [Aspergillus fumigatus
           Af293]
 gi|66851053|gb|EAL91379.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           fumigatus Af293]
 gi|159126856|gb|EDP51972.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           fumigatus A1163]
          Length = 405

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 5/135 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W+ Y  A  + W   E+ +  DL  W   N L DDER  I   L FFA+S+
Sbjct: 85  LFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWN--NRLNDDERYFISHVLAFFAASD 142

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N++      +  PE R +   Q   E +HS T+  +I +   +  +   LF+   
Sbjct: 143 GIVNENLLERFSNEVQVPEARCFYGFQIMIENIHSETYSLLIDTYIKEPKQRTYLFDAID 202

Query: 151 EVPSITAKANWALQY 165
            +P I  KA WA+++
Sbjct: 203 TIPCIRKKAQWAMRW 217


>gi|290995765|ref|XP_002680453.1| predicted protein [Naegleria gruberi]
 gi|284094074|gb|EFC47709.1| predicted protein [Naegleria gruberi]
          Length = 338

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 6/138 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L PL Y   WE Y     + W   EV +  D+  W+    L  +E+  IK  L FFA+S+
Sbjct: 31  LFPLHYPKMWEMYKKTMASFWTVEEVDLHTDITEWEK---LNSNEQHFIKTVLAFFAASD 87

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +  PE R +   Q   E +H+  +  +I +L  D+ E   LF+   
Sbjct: 88  GIVNENLCQQFMAQVQVPEARCFYGFQIAIENIHAEMYSTLIETLIKDQRERNRLFHAID 147

Query: 151 EVPSITAKANWALQYTQT 168
            VPS+  KANWAL++  +
Sbjct: 148 TVPSVQKKANWALKWINS 165


>gi|72008642|ref|XP_780110.1| PREDICTED: similar to ribonucleotide reductase protein R2 class I
           isoform 1 [Strongylocentrotus purpuratus]
 gi|115928579|ref|XP_001179668.1| PREDICTED: similar to ribonucleotide reductase protein R2 class I
           [Strongylocentrotus purpuratus]
          Length = 412

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 85/172 (49%), Gaps = 12/172 (6%)

Query: 7   LSPIQAGEKRV--NVDDKRML--NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           + P  +G+K V  N +D+ +L  NAR  V  + P++Y   W+ Y  A  + W   EV + 
Sbjct: 71  VKPENSGKKVVSFNKEDEPLLRENARRFV--IFPIQYHDIWQFYKKAEASFWTAEEVDLS 128

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            DL  W +   L D+ER  I   L FFA+S+ +V  N+V    + +   E R +   Q  
Sbjct: 129 KDLDHWAN---LKDEERHFISHVLAFFAASDGIVNENLVERFSQEVQVAEARCFYGFQIA 185

Query: 123 EEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
            E +HS  +  +I +   D  +   LFN    +P +T KA WAL +  + S+
Sbjct: 186 IENIHSEMYSLLIDTYIKDSVQRDFLFNAVETLPCVTKKAQWALNWIGSDSA 237


>gi|156087150|ref|XP_001610982.1| ribonucleoside-diphosphate reductase small subunit [Babesia bovis
           T2Bo]
 gi|154798235|gb|EDO07414.1| ribonucleoside-diphosphate reductase small subunit, putative
           [Babesia bovis]
          Length = 339

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 6/137 (4%)

Query: 32  NQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFAS 91
           N L P+KY   WE Y  A  + W   E+ +  DL  W +   LT+ E   IK  L FFA+
Sbjct: 31  NGLYPIKYPDFWEWYKKAQASFWTSEEIDLSSDLKDWGT---LTEGEHHFIKNVLAFFAA 87

Query: 92  SESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYRE 151
           S+ +V  N+ L   + +  PE + +   Q   E +HS T+  +I     DE E   ++R 
Sbjct: 88  SDGIVLENLALRFLKDVKLPEAKFFYCFQITVENIHSETYSLLIEQYIRDEAEKDRLFRA 147

Query: 152 VPSITA---KANWALQY 165
           + +I A   KA WA ++
Sbjct: 148 IETIDAVRDKAIWAAKW 164


>gi|289742419|gb|ADD19957.1| ribonucleotide reductase beta subunit [Glossina morsitans
           morsitans]
          Length = 396

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 69/141 (48%), Gaps = 6/141 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W+ Y  A  + W   EV +  D+  W   N L+D ER  I   L FFA+S+
Sbjct: 89  IFPIQYPEIWKMYKKAEASFWTAEEVDLSKDMDDW---NRLSDGERHFISHVLAFFAASD 145

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +   E R +   Q   E VHS  +  +I +  +DE E   LFN   
Sbjct: 146 GIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSLLIETYIMDEKEREYLFNAIE 205

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +P +  KA WAL +  + S+
Sbjct: 206 TMPLVKKKAEWALAWISSHSA 226


>gi|145537171|ref|XP_001454302.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124422057|emb|CAK86905.1| unnamed protein product [Paramecium tetraurelia]
          Length = 507

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 77/166 (46%), Gaps = 8/166 (4%)

Query: 5   TGLSPIQAGEKRV--NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           T LS +Q  +  V  N  D+ +L    +   L P+KY   W  Y     + W   E+ + 
Sbjct: 170 TPLSNLQTSQPVVQQNECDEPLLKQNPNRFVLFPIKYNDIWNMYKQHKASFWTAEEIDLY 229

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            DL  W+    LT DE+  IK  L FFA+S+ +V  N+       +  PE R +   Q  
Sbjct: 230 QDLKDWEK---LTADEKHFIKYVLAFFAASDGIVNENLAQQFCTEVQVPEARCFYGFQIA 286

Query: 123 EEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
            E +HS T+  +I +   DE E   L +    VP I  KA WA+++
Sbjct: 287 MENIHSETYSLLIDTYITDENEKNYLLHAIDNVPVIQKKAMWAMKW 332


>gi|320164906|gb|EFW41805.1| ribonucleotide reductase m2 polypeptide [Capsaspora owczarzaki ATCC
           30864]
          Length = 352

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 80/190 (42%), Gaps = 26/190 (13%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GLS ++  E  +  +  R +        L P++Y   W+ Y  A  + W   EV +  DL
Sbjct: 25  GLSKLELDEPLLKPNPHRFV--------LFPIQYHDVWKMYKKAEASFWTAEEVDLSKDL 76

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             W   + L  +ER  I   L FFA+S+ +V  N++L     +  PE R +   Q   E 
Sbjct: 77  NDW---DKLKSEERHFISHVLAFFAASDGIVNENLLLRFSTEVQIPEVRSFYCFQIAIEN 133

Query: 126 VHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRR 182
           +HS  +  +I     D  E   LFN    +P +  KA WAL+            W   RR
Sbjct: 134 IHSEMYSLLIDMYIKDSAEREKLFNAIETLPCVAKKAQWALR------------WISDRR 181

Query: 183 SRILTRSLRF 192
           S    R + F
Sbjct: 182 STFAHRLIAF 191


>gi|152989800|ref|YP_001355522.1| ribonucleotide-diphosphate reductase subunit beta [Nitratiruptor
           sp. SB155-2]
 gi|151421661|dbj|BAF69165.1| ribonucleoside-diphosphate reductase, beta subunit [Nitratiruptor
           sp. SB155-2]
          Length = 341

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 86/162 (53%), Gaps = 5/162 (3%)

Query: 14  EKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
           E   +V+++++     + + +L  +KY WA+  +     N W P EV M  D   +K   
Sbjct: 12  ESHESVNERKVFGGDPTGIFELNKIKYQWAYNLWEMMLANTWFPKEVDMTQDARDYKL-- 69

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
            LTD E+L   + L      +SL  NN++  +  +++ PE    L+RQAFEEA+HS ++ 
Sbjct: 70  -LTDAEKLAYDKVLAQLIFMDSLQTNNLIDNVNPYITAPEINLILVRQAFEEALHSQSYA 128

Query: 133 YIITSLGLDEGELFNMYREVPSITAKANW-ALQYTQTLSSPS 173
            ++ S+  +  E++ ++RE   +  K ++ A  Y +  ++PS
Sbjct: 129 VMVDSISQNTDEIYELWREDLQLKQKNDYIAHVYEELAANPS 170


>gi|302678465|ref|XP_003028915.1| hypothetical protein SCHCODRAFT_83117 [Schizophyllum commune H4-8]
 gi|300102604|gb|EFI94012.1| hypothetical protein SCHCODRAFT_83117 [Schizophyllum commune H4-8]
          Length = 331

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 67/135 (49%), Gaps = 5/135 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   W+ Y  A  + W   E+ +  DL  W+  N + D+ER  I   L FFA+S+
Sbjct: 19  LFPIQYPEIWQMYKKAEASFWTAEEMDLSKDLHDWQ--NRMNDNERHFISHVLAFFAASD 76

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N++      +  PE R +   Q   E +HS T+  +I +   +  E   LFN   
Sbjct: 77  GIVNENLLERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIREAAEREHLFNAVE 136

Query: 151 EVPSITAKANWALQY 165
            +P +  KA WAL++
Sbjct: 137 TIPCVARKAQWALRW 151


>gi|296227440|ref|XP_002759377.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
           isoform 1 [Callithrix jacchus]
          Length = 351

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 6/161 (3%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           S     E  +  +++ +L   S    + P++Y   W+ Y  A  + W   EV +  DL  
Sbjct: 18  SSADTNENEIKSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPH 77

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           W   N L  DE+  I   L FFA+S+ +V  N+V    + +  PE R +   Q   E VH
Sbjct: 78  W---NKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVH 134

Query: 128 SHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
           S  +  +I +   D  +   LFN    +P +  KA+WAL++
Sbjct: 135 SEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRW 175


>gi|321263777|ref|XP_003196606.1| ribonucleoside-diphosphate reductase [Cryptococcus gattii WM276]
 gi|317463083|gb|ADV24819.1| Ribonucleoside-diphosphate reductase, putative [Cryptococcus gattii
           WM276]
          Length = 401

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 68/135 (50%), Gaps = 5/135 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W+ Y  A  + W   E+ +  DL  W++K  L D+ER  I+  L FFA+S+
Sbjct: 86  LFPIKYHEIWQMYKKAQASFWTAEEINLAPDLHDWENK--LNDNERYFIEHVLAFFAASD 143

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +   E + +   Q   E +H+ T+  +I +   D      LF+   
Sbjct: 144 GIVNENLVERFSAEVQAAEAKSFYGFQIMMENIHAETYSLLIDTYIKDTARRNFLFDAMD 203

Query: 151 EVPSITAKANWALQY 165
            +P I  KA+WAL++
Sbjct: 204 TIPCIRKKADWALRW 218


>gi|840719|emb|CAA54549.1| ribonucleotide reductase R2 [Arabidopsis thaliana]
          Length = 340

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 13/154 (8%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L A++    + P++Y   WE Y  A  + W   EV +  D+  W++   LTD E+ 
Sbjct: 18  EEPLLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWEA---LTDSEKH 74

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSN---PECRQYLLRQAFEEAVHSHTFQYIITS 137
            I   L FFA+S+ +V  N+     R L++   PE R +   Q   E +HS  +  ++ +
Sbjct: 75  FISHILAFFAASDGIVLENLA----RFLNDVQVPEARAFYGFQIAMENIHSEMYSLLLET 130

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQYTQT 168
              D  E   LFN    +P I+ KA W L + Q+
Sbjct: 131 FIKDSKEKDRLFNAIETIPCISKKAKWCLDWIQS 164


>gi|58260896|ref|XP_567858.1| ribonucleoside-diphosphate reductase [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134116993|ref|XP_772723.1| hypothetical protein CNBK0970 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255341|gb|EAL18076.1| hypothetical protein CNBK0970 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229939|gb|AAW46341.1| ribonucleoside-diphosphate reductase, putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 401

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 68/135 (50%), Gaps = 5/135 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W+ Y  A  + W   E+ +  DL  W++K  L D+ER  I+  L FFA+S+
Sbjct: 86  LFPIKYHEIWQMYKKAQASFWTAEEINLAPDLHDWENK--LNDNERYFIEHVLAFFAASD 143

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +   E + +   Q   E +H+ T+  +I +   D      LF+   
Sbjct: 144 GIVNENLVERFSAEVQAAEAKSFYGFQIMMENIHAETYSLLIDTYIKDTARRNFLFDAID 203

Query: 151 EVPSITAKANWALQY 165
            +P I  KA+WAL++
Sbjct: 204 TIPCIRKKADWALRW 218


>gi|7023557|dbj|BAA92005.1| unnamed protein product [Homo sapiens]
          Length = 351

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 6/155 (3%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           E  +  +++ +L   S    + P++Y   W+ Y  A  + W   EV +  DL  W   N 
Sbjct: 24  ESEIKSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHW---NK 80

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           L  DE+  I   L FFA+S+ +V  N+V    + +  PE R +   Q   E VHS  +  
Sbjct: 81  LKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSL 140

Query: 134 IITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
           +I +   D  +   LFN    +P +  KA+WAL++
Sbjct: 141 LIDTYIRDPKKREFLFNAIETMPYVKKKADWALRW 175


>gi|42544136|ref|NP_056528.2| ribonucleoside-diphosphate reductase subunit M2 B isoform 1 [Homo
           sapiens]
 gi|114621161|ref|XP_001153916.1| PREDICTED: ribonucleotide reductase M2 B (TP53 inducible) isoform 2
           [Pan troglodytes]
 gi|74727333|sp|Q7LG56|RIR2B_HUMAN RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B;
           AltName: Full=TP53-inducible ribonucleotide reductase M2
           B; AltName: Full=p53-inducible ribonucleotide reductase
           small subunit 2-like protein; Short=p53R2
 gi|261278726|pdb|3HF1|A Chain A, Crystal Structure Of Human P53r2
 gi|261278727|pdb|3HF1|B Chain B, Crystal Structure Of Human P53r2
 gi|7229086|dbj|BAA92434.1| ribonucleotide reductase [Homo sapiens]
 gi|7229115|dbj|BAA92493.1| ribonucleotide reductase [Homo sapiens]
 gi|45259569|dbj|BAD12267.1| p53-inducible ribonucleotide reductase small subunit 2 [Homo
           sapiens]
 gi|52545612|emb|CAB70703.2| hypothetical protein [Homo sapiens]
 gi|63055293|gb|AAY29059.1| ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
 gi|80473666|gb|AAI08262.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
 gi|109659128|gb|AAI17497.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
 gi|119612247|gb|EAW91841.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_b [Homo
           sapiens]
 gi|120660296|gb|AAI30629.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
 gi|190689549|gb|ACE86549.1| ribonucleotide reductase M2 B (TP53 inducible) protein [synthetic
           construct]
 gi|190690911|gb|ACE87230.1| ribonucleotide reductase M2 B (TP53 inducible) protein [synthetic
           construct]
 gi|261859014|dbj|BAI46029.1| ribonucleotide reductase M2 B [synthetic construct]
 gi|313882916|gb|ADR82944.1| ribonucleotide reductase M2 B (TP53 inducible) [synthetic
           construct]
          Length = 351

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 6/155 (3%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           E  +  +++ +L   S    + P++Y   W+ Y  A  + W   EV +  DL  W   N 
Sbjct: 24  ESEIKSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHW---NK 80

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           L  DE+  I   L FFA+S+ +V  N+V    + +  PE R +   Q   E VHS  +  
Sbjct: 81  LKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSL 140

Query: 134 IITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
           +I +   D  +   LFN    +P +  KA+WAL++
Sbjct: 141 LIDTYIRDPKKREFLFNAIETMPYVKKKADWALRW 175


>gi|10432587|dbj|BAB13815.1| ribonucleotide reductase small subunit [Lentinula edodes]
          Length = 418

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 5/135 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   W+ Y  A  + W   E+ +  DL  W   N L D ER  I R L FFA+S+
Sbjct: 104 LFPIQYHEIWQMYKKAEASFWTAEEMDLSKDLHDWN--NRLNDSERFFISRVLAFFAASD 161

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N++      +   E R +   Q   E +HS T+  +I +   D  E   LF+   
Sbjct: 162 GIVNENLLERFSNEVQVAEARCFYGFQIMMENIHSETYSLLIDTYIKDPVERDFLFDAIE 221

Query: 151 EVPSITAKANWALQY 165
            +P I  KA WAL++
Sbjct: 222 TIPCIKRKAEWALRW 236


>gi|194319980|pdb|2VUX|A Chain A, Human Ribonucleotide Reductase, Subunit M2 B
 gi|194319981|pdb|2VUX|B Chain B, Human Ribonucleotide Reductase, Subunit M2 B
          Length = 326

 Score = 72.8 bits (177), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 6/155 (3%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           E  +  +++ +L   S    + P++Y   W+ Y  A  + W   EV +  DL  W   N 
Sbjct: 28  ESEIKSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHW---NK 84

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           L  DE+  I   L FFA+S+ +V  N+V    + +  PE R +   Q   E VHS  +  
Sbjct: 85  LKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSL 144

Query: 134 IITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
           +I +   D  +   LFN    +P +  KA+WAL++
Sbjct: 145 LIDTYIRDPKKREFLFNAIETMPYVKKKADWALRW 179


>gi|291276761|ref|YP_003516533.1| ribonucleoside-diphosphate reductase subunit beta [Helicobacter
           mustelae 12198]
 gi|290963955|emb|CBG39794.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter
           mustelae 12198]
          Length = 344

 Score = 72.8 bits (177), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 81/145 (55%), Gaps = 3/145 (2%)

Query: 18  NVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           +V+D+++     + +  L  +KY WA++ + +   N W P EV M +D   +   N LT 
Sbjct: 19  SVNDRKIFGGNPTSMFDLNKIKYQWAYDLWKTMLANTWFPEEVSMNEDKRDYN--NLLTA 76

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
            E+L   R L      +SL  NN++  +  ++++PE    L+RQA+EEA+HS ++  ++ 
Sbjct: 77  QEKLGYDRALAQLIFMDSLQTNNLIDNVNPYITSPEINLILVRQAYEEALHSQSYAVMVE 136

Query: 137 SLGLDEGELFNMYREVPSITAKANW 161
           S+  +  E+++M+R    + +K ++
Sbjct: 137 SISANTDEIYDMWRVDMQLKSKNDY 161


>gi|328855581|gb|EGG04707.1| hypothetical protein MELLADRAFT_49061 [Melampsora larici-populina
           98AG31]
          Length = 385

 Score = 72.8 bits (177), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 5/135 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W  Y  A  + W   E+ +  D+  W+  N L DDE+  IK  L FFA+S+
Sbjct: 65  LFPIKYHEIWASYKRAEASFWTAEEIDLSKDMHDWE--NRLNDDEKHFIKHVLAFFAASD 122

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL---GLDEGELFNMYR 150
            +V  N++      +   E R +   Q   E +HS  +  +I +     ++   LF+   
Sbjct: 123 GIVNENLIERFSGEVQAAEARCFYGFQIMMENIHSEVYSLLIDTYVREPIERSHLFDAID 182

Query: 151 EVPSITAKANWALQY 165
            +P I  KA+WAL++
Sbjct: 183 TIPCIRKKADWALKW 197


>gi|307110551|gb|EFN58787.1| hypothetical protein CHLNCDRAFT_34102 [Chlorella variabilis]
          Length = 335

 Score = 72.4 bits (176), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 6/146 (4%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +L +  D   + P+KY   WE Y  A  + W   EV +  D+  W+    L+DDER  + 
Sbjct: 16  LLASNDDRFVMFPIKYRDIWEMYKKAEASFWTAEEVDLGSDVKDWER---LSDDERHFVS 72

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
             L FFA+S+ +V  N+     + +  PE R +   Q   E +HS  +  ++ +   D  
Sbjct: 73  HVLAFFAASDGIVNENLGARFMQEVQVPEARAFYGFQIAMENIHSEMYSLLLEAYIKDPK 132

Query: 144 E---LFNMYREVPSITAKANWALQYT 166
           E   LF+    VP +  KA+WAL++ 
Sbjct: 133 EKDKLFHAIDTVPVVRKKAHWALKWI 158


>gi|197101489|ref|NP_001125944.1| ribonucleoside-diphosphate reductase subunit M2 B [Pongo abelii]
 gi|75041724|sp|Q5R9G0|RIR2B_PONAB RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B
 gi|55729743|emb|CAH91600.1| hypothetical protein [Pongo abelii]
          Length = 351

 Score = 72.4 bits (176), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 6/155 (3%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           E  +  +++ +L   S    + P++Y   W+ Y  A  + W   EV +  DL  W   N 
Sbjct: 24  ENEIKSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHW---NK 80

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           L  DE+  I   L FFA+S+ +V  N+V    + +  PE R +   Q   E VHS  +  
Sbjct: 81  LKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSL 140

Query: 134 IITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
           +I +   D  +   LFN    +P +  KA+WAL++
Sbjct: 141 LIDTYIRDPKKREFLFNAIETMPYVKKKADWALRW 175


>gi|47213107|emb|CAF89527.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 369

 Score = 72.4 bits (176), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W+ Y  A  + W   EV +  DL  W+S   L DDER  I   L FFA+S+
Sbjct: 14  IFPIQYQDLWQMYKKAEASFWTAEEVDLSKDLQHWES---LKDDERFFISHVLAFFAASD 70

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +   E R +   Q   E +HS  +  +I +   +  E   LFN   
Sbjct: 71  GIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKEPSEREYLFNAIE 130

Query: 151 EVPSITAKANWAL 163
            +P +  KA+WAL
Sbjct: 131 TLPCVKKKADWAL 143


>gi|319942042|ref|ZP_08016361.1| ribonucleoside-diphosphate reductase subunit beta [Sutterella
           wadsworthensis 3_1_45B]
 gi|319804426|gb|EFW01304.1| ribonucleoside-diphosphate reductase subunit beta [Sutterella
           wadsworthensis 3_1_45B]
          Length = 344

 Score = 72.4 bits (176), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 68/126 (53%), Gaps = 3/126 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA+E ++ +   HW+ TEVPM +D+  ++ K  LTD ER  + + L FF   +  
Sbjct: 35  PFQYPWAYEAFMQSEQMHWLWTEVPMLEDVKDYQQK--LTDSERDFLTKILRFFTQGDID 92

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V+   V +       PE R  L   A  EAVH   + ++I +LGL E  ++N + +  ++
Sbjct: 93  VSGAYVNSYLPRFKQPEVRMMLSSFAAREAVHIAAYSHLIETLGLPES-IYNEFLQYEAM 151

Query: 156 TAKANW 161
            AK ++
Sbjct: 152 AAKHDF 157


>gi|195953600|ref|YP_002121890.1| Ribonucleoside-diphosphate reductase [Hydrogenobaculum sp. Y04AAS1]
 gi|195933212|gb|ACG57912.1| Ribonucleoside-diphosphate reductase [Hydrogenobaculum sp. Y04AAS1]
          Length = 319

 Score = 72.4 bits (176), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 65/124 (52%), Gaps = 3/124 (2%)

Query: 46  YLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIY 105
           Y  A NN+W+P E  + +D   +  K  L D ER  +   +GFF+S+E  V  NI L I 
Sbjct: 37  YTKAKNNYWIPEEYDLANDKHEFYEK--LNDIERHYMLHTVGFFSSAEGWVGQNI-LEIS 93

Query: 106 RHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQY 165
           + + N E R +L  Q  EE  H  TF+YI+  L L   E++ M+  V  I  KA++ ++ 
Sbjct: 94  KRIRNTETRMFLGYQLMEEMKHIDTFRYIMDGLDLKPHEVYAMHENVKEIKRKADFEVKR 153

Query: 166 TQTL 169
              L
Sbjct: 154 AMAL 157


>gi|194673004|ref|XP_607398.4| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 1 [Bos
           taurus]
 gi|297482473|ref|XP_002692807.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like [Bos
           taurus]
 gi|296480530|gb|DAA22645.1| ribonucleotide reductase M2 polypeptide-like [Bos taurus]
          Length = 351

 Score = 72.4 bits (176), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 73/155 (47%), Gaps = 6/155 (3%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           E     D++ +L   S    + P++Y   W+ Y  A  + W   EV +  DL  W   N 
Sbjct: 24  ENEAKSDEEPLLRKSSRRFVIFPIQYPDIWKMYKKAQASFWTAEEVDLSKDLPHW---NK 80

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           L  +E+  I   L FFA+S+ +V  N+V    + +  PE R +   Q   E VHS  +  
Sbjct: 81  LKSEEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSL 140

Query: 134 IITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
           +I +   D  +   LFN    +P +  KA+WAL++
Sbjct: 141 LIDTYIRDPKKREFLFNAIETMPYVKKKADWALRW 175


>gi|225012154|ref|ZP_03702591.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
           MS024-2A]
 gi|225003709|gb|EEG41682.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
           MS024-2A]
          Length = 325

 Score = 72.4 bits (176), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/144 (31%), Positives = 71/144 (49%), Gaps = 8/144 (5%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+K+   WE Y     + W   E+ +  DL  W +K  LT+DE+  IK  L FFA+S+
Sbjct: 17  IFPIKHHDIWEWYKKMEASFWTAEEIDLHQDLTDWNTK--LTEDEKYFIKHILAFFAASD 74

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +   E + +   Q   E +HS T+  +I +   D+ E   LF    
Sbjct: 75  GIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDDVEKDRLFKAIE 134

Query: 151 EVPSITAKANWALQYTQTLSSPSF 174
             P+I  KA+WAL++   + S SF
Sbjct: 135 VFPAIKKKADWALRW---IDSDSF 155


>gi|255536887|ref|XP_002509510.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
           communis]
 gi|223549409|gb|EEF50897.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
           communis]
          Length = 329

 Score = 72.4 bits (176), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 6/156 (3%)

Query: 19  VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
           + ++ +L    D   + P++Y   WE Y  A  + W   EV +  DL  W+S   LT DE
Sbjct: 4   IPEEPLLAPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDLRHWES---LTPDE 60

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           +  I   L FFA+S+ +V  N+     + +   E R +   Q   E +HS  +  ++ + 
Sbjct: 61  KHFISHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120

Query: 139 GLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
             D  E   LF+    VP I  KA WAL++     S
Sbjct: 121 IKDSNEKNRLFHAIETVPCIAKKAEWALKWIDGSES 156


>gi|156340310|ref|XP_001620415.1| hypothetical protein NEMVEDRAFT_v1g148226 [Nematostella vectensis]
 gi|156205304|gb|EDO28315.1| predicted protein [Nematostella vectensis]
          Length = 224

 Score = 72.4 bits (176), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 5/150 (3%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +L    D   + P+K+   WE Y     + W   E+ +  D+  W +K  L +DE+  IK
Sbjct: 7   ILQENKDRFVIFPIKHHDIWEWYKKMEASFWTAEEIDLHQDITDWNTK--LNEDEKYFIK 64

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
             L FFA+S+ +V  N+       +   E + +   Q   E +HS T+  +I +   DE 
Sbjct: 65  HILAFFAASDGIVNENLAENFVNEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKDEV 124

Query: 144 E---LFNMYREVPSITAKANWALQYTQTLS 170
           E   LF+     P+I  KA WAL++ ++ S
Sbjct: 125 EKDKLFHAIEVFPAIKRKAEWALKWIESDS 154


>gi|322510876|gb|ADX06189.1| putative ribonucleotide reductase small subunit [Organic Lake
           phycodnavirus 2]
          Length = 324

 Score = 72.4 bits (176), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 70/164 (42%), Gaps = 18/164 (10%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+     W+ Y    +  W P E+    D+  W   N L  DE+  IK  L FFASS+
Sbjct: 19  MFPVSDETIWKMYKKQVDCFWRPEEIDTSKDMTHW---NKLNTDEQYFIKMILAFFASSD 75

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+ L     +   E R +   Q   E +HS T+  +I S   D  E   LF+   
Sbjct: 76  GIVLENLGLRFMNEVQLSEARAFYGFQIAMENIHSETYSLLIDSYIKDSDEKHKLFHSLE 135

Query: 151 EVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             P I  K +WA++            W + ++S   TR + F C
Sbjct: 136 HFPCIKKKGDWAMK------------WIQDKKSSFATRLVAFAC 167


>gi|326437649|gb|EGD83219.1| ribonucleotide reductase M2 B [Salpingoeca sp. ATCC 50818]
          Length = 408

 Score = 72.0 bits (175), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 67/135 (49%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           +LP+++   W  Y  A  + W   EV +  DL  W+   GL D E+  IK  L FFA+S+
Sbjct: 98  ILPIQHRQVWSMYKKAVASFWTAEEVDLSRDLDHWR---GLKDTEQHFIKHVLAFFAASD 154

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +  PE R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 155 GIVNENLVERFMCEVQLPEARCFYGFQIMIENIHSEMYSLLIDTYINDPQEKHMLFNAVE 214

Query: 151 EVPSITAKANWALQY 165
            +P++  KA WA+++
Sbjct: 215 TLPAVKRKAEWAMRW 229


>gi|91081999|ref|XP_969259.1| PREDICTED: similar to AGAP006818-PA [Tribolium castaneum]
 gi|270007377|gb|EFA03825.1| hypothetical protein TcasGA2_TC013940 [Tribolium castaneum]
          Length = 374

 Score = 72.0 bits (175), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 66/133 (49%), Gaps = 5/133 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W+KY  A  + W   EV +  DL  WK+K  L  DER  I   L FFA+S+
Sbjct: 67  VFPIQYPDIWDKYKQAEASFWTTEEVDLSKDLDDWKNK--LNSDERYFISHVLAFFAASD 124

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +   E R +   Q   E +HS  +  +I +   +  E   LFN   
Sbjct: 125 GIVNENLVERFSQEVQVTEARCFYGFQIAIENIHSEMYSMLIETYISEPQEKEFLFNAIE 184

Query: 151 EVPSITAKANWAL 163
            +P +  KA+WAL
Sbjct: 185 TLPCVKKKADWAL 197


>gi|41054952|ref|NP_955770.1| ribonucleoside-diphosphate reductase subunit M2 B [Mus musculus]
 gi|81885688|sp|Q6PEE3|RIR2B_MOUSE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B;
           AltName: Full=TP53-inducible ribonucleotide reductase M2
           B; AltName: Full=p53-inducible ribonucleotide reductase
           small subunit 2-like protein; Short=p53R2
 gi|34786000|gb|AAH58103.1| Ribonucleotide reductase M2 B (TP53 inducible) [Mus musculus]
 gi|74218244|dbj|BAE23760.1| unnamed protein product [Mus musculus]
          Length = 351

 Score = 72.0 bits (175), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 6/158 (3%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
           +  E  V  +++ +L   S    + P++Y   W  Y  A  + W   EV +  DL  W  
Sbjct: 21  ETEENVVRSNEEPLLRKSSRRFVIFPIQYPDIWRMYKQAQASFWTAEEVDLSKDLPHW-- 78

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            N L  DE+  I   L FFA+S+ +V  N+V    + +  PE R +   Q   E VHS  
Sbjct: 79  -NKLKSDEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEM 137

Query: 131 FQYIITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
           +  +I +   D  +   LFN    +P +  KA+WAL++
Sbjct: 138 YSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRW 175


>gi|122921307|pdb|2O1Z|A Chain A, Plasmodium Vivax Ribonucleotide Reductase Subunit R2
           (Pv086155)
 gi|122921308|pdb|2O1Z|B Chain B, Plasmodium Vivax Ribonucleotide Reductase Subunit R2
           (Pv086155)
          Length = 311

 Score = 72.0 bits (175), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 6/154 (3%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++++L+  +D   L P+ Y   W+ Y  A  + W   E+ +  DL   K    L D+E+ 
Sbjct: 29  NEKILSKETDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDL---KDFEKLNDNEKH 85

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            IK  L FFA+S+ +V  N+     R +   E +++   Q   E +HS T+  +I +   
Sbjct: 86  FIKHVLAFFAASDGIVLENLASKFLRQVKITEAKKFYAFQIAVENIHSETYSLLIDNYIK 145

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           DE E   LF+    +P++  KA WA ++    +S
Sbjct: 146 DEKERMNLFHAIENIPAVKNKALWAAKWINDTNS 179


>gi|156102402|ref|XP_001616894.1| ribonucleoside-diphosphate reductase small chain [Plasmodium vivax
           SaI-1]
 gi|148805768|gb|EDL47167.1| ribonucleoside-diphosphate reductase small chain, putative
           [Plasmodium vivax]
          Length = 349

 Score = 72.0 bits (175), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 6/154 (3%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++++L+  +D   L P+ Y   W+ Y  A  + W   E+ +  DL   K    L D+E+ 
Sbjct: 30  NEKILSKETDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDL---KDFEKLNDNEKH 86

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            IK  L FFA+S+ +V  N+     R +   E +++   Q   E +HS T+  +I +   
Sbjct: 87  FIKHVLAFFAASDGIVLENLASKFLRQVKITEAKKFYAFQIAVENIHSETYSLLIDNYIK 146

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           DE E   LF+    +P++  KA WA ++    +S
Sbjct: 147 DEKERMNLFHAIENIPAVKNKALWAAKWINDTNS 180


>gi|146090952|ref|XP_001466403.1| ribonucleoside-diphosphate reductase small chain [Leishmania
           infantum JPCM5]
 gi|321399462|emb|CBZ08664.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania infantum JPCM5]
          Length = 392

 Score = 72.0 bits (175), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 17/186 (9%)

Query: 2   ANNTGLSPIQAGEKRVNVDD-KRMLNARSDVNQ--------LLPLKYGWAWEKYLSACNN 52
           A +  + P+ AG + +  D   +  NA  +  Q        L P++Y   W KY    + 
Sbjct: 43  AEDLVMKPVAAGTEVLTADKVAKGTNAEEEPLQQENPLRYVLFPIQYHDIWRKYKEQESC 102

Query: 53  HWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPE 112
            W   E+ + +D+  W +   L D ER  IK  L FFA S+ +V  N+       +  PE
Sbjct: 103 IWTVEEIDLGNDMKDWAT---LNDGERHFIKHVLAFFAGSDGIVIENLAQRFMSDVKVPE 159

Query: 113 CRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTL 169
            R +   Q   E +HS T+  ++ +   D  E   L +  + +P I  KA WA+++    
Sbjct: 160 ARAFYGFQLMMENIHSETYSVLLDTYITDSEEKLRLLHAIQTIPCIQKKAEWAVRWIG-- 217

Query: 170 SSPSFH 175
           SS SF 
Sbjct: 218 SSASFQ 223


>gi|194036959|ref|XP_001925036.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B [Sus
           scrofa]
          Length = 351

 Score = 72.0 bits (175), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W+ Y  A  + W   EV +  DL  W   N L  DE+  I   L FFA+S+
Sbjct: 44  IFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHW---NRLKSDEKYFISHILAFFAASD 100

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +  PE R +   Q   E VHS  +  +I +   D  +   LFN   
Sbjct: 101 GIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKQREFLFNAIE 160

Query: 151 EVPSITAKANWALQY 165
            +P +  KA+WAL++
Sbjct: 161 TMPYVKKKADWALRW 175


>gi|194474072|ref|NP_001124015.1| ribonucleoside-diphosphate reductase subunit M2 B [Rattus
           norvegicus]
 gi|149066498|gb|EDM16371.1| ribonucleotide reductase M2 B (TP53 inducible) (predicted) [Rattus
           norvegicus]
          Length = 351

 Score = 72.0 bits (175), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 6/158 (3%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
           +  E  V  +++ +L   S    + P++Y   W+ Y  A  + W   EV +  DL  W  
Sbjct: 21  ETKENEVRSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHW-- 78

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            N L  +E+  I   L FFA+S+ +V  N+V    + +  PE R +   Q   E VHS  
Sbjct: 79  -NKLKSEEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEM 137

Query: 131 FQYIITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
           +  +I +   D  +   LFN    +P +  KA+WAL++
Sbjct: 138 YSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRW 175


>gi|32266105|ref|NP_860137.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           hepaticus ATCC 51449]
 gi|32262154|gb|AAP77203.1| ribonucleoside diphosphate reductase [Helicobacter hepaticus ATCC
           51449]
          Length = 349

 Score = 71.6 bits (174), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 3/138 (2%)

Query: 14  EKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
           E   +V D+++     + +  L  +KY WA+  +     N W P EV M  D   +    
Sbjct: 19  ESTESVADRKIFGGNPTSMFDLNKIKYQWAYNLWKVMLANTWFPEEVNMTPDKRDYNG-- 76

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
           GLT  E+L   R L      +SL  NN++  +  ++++PE    L+RQA+EEA+HS ++ 
Sbjct: 77  GLTAQEKLGYDRALAQLIFMDSLQTNNLIDNVNPYITSPEINLILVRQAYEEALHSQSYA 136

Query: 133 YIITSLGLDEGELFNMYR 150
            ++ S+  +  E++NM+R
Sbjct: 137 VMVESISANTDEIYNMWR 154


>gi|167519412|ref|XP_001744046.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778008|gb|EDQ91624.1| predicted protein [Monosiga brevicollis MX1]
          Length = 329

 Score = 71.6 bits (174), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 67/135 (49%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           +LP+++   W+ Y  A  + W   EV +  DL  W   N L  DE+  IK  L FFA+S+
Sbjct: 22  ILPIQHDAIWKMYKKAEASFWTVEEVDLGRDLVDW---NKLNKDEQFFIKHVLAFFAASD 78

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +  PE R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 79  GIVNENLVERFMTEVQLPEARCFYGFQIAIENIHSEMYSRLIETYVNDSAEKDSLFNAIE 138

Query: 151 EVPSITAKANWALQY 165
            +P++  KA WA+++
Sbjct: 139 TLPAVRRKAEWAMRW 153


>gi|22788780|ref|NP_690492.1| Rr2 [Heliothis zea virus 1]
 gi|22671540|gb|AAN04367.1|AF451898_72 Rr2 [Heliothis zea virus 1]
          Length = 333

 Score = 71.6 bits (174), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 5/135 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   WE Y  A  + W   EV +  DL  W+++  LT+ ER  I   L FFA S+
Sbjct: 22  LFPIRYHDIWEMYKKAQASFWTVEEVDLSKDLYDWETR--LTETEREFISHILAFFAGSD 79

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD---EGELFNMYR 150
            +V +N++    + L+ PE   +   Q   E VHS  +  +I     D   +  LFN   
Sbjct: 80  GIVNDNLLTRFSQELTIPEVSCFYGFQIMIENVHSEMYSTLIDMYIRDPQRKHMLFNAID 139

Query: 151 EVPSITAKANWALQY 165
            VPSI  KA W +++
Sbjct: 140 TVPSIRKKAQWVIRW 154


>gi|110636874|ref|YP_677081.1| ribonucleoside-diphosphate reductase 1 subunit beta [Cytophaga
           hutchinsonii ATCC 33406]
 gi|110279555|gb|ABG57741.1| ribonucleoside-diphosphate reductase 1, beta subunit [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 324

 Score = 71.6 bits (174), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 6/140 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+K+   W  Y     + W   E+ +  DL  W +   L D ER  I   L FFA+S+
Sbjct: 18  LFPIKHDDIWAMYKQEEASFWTAEEIDLSQDLIDWAN---LNDGERHFISHVLAFFAASD 74

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+ +     +  PE + +   Q   E +HS T+  +I +   D  E   LFN   
Sbjct: 75  GIVNENLAVNFLEKVQIPEAKCFYGFQIMMENIHSETYSLLIDTYIKDPKEKDRLFNAID 134

Query: 151 EVPSITAKANWALQYTQTLS 170
            VP +  KA+WAL++    S
Sbjct: 135 TVPCVKKKADWALRFIDNGS 154


>gi|164659270|ref|XP_001730759.1| hypothetical protein MGL_1758 [Malassezia globosa CBS 7966]
 gi|159104657|gb|EDP43545.1| hypothetical protein MGL_1758 [Malassezia globosa CBS 7966]
          Length = 397

 Score = 71.6 bits (174), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 67/136 (49%), Gaps = 7/136 (5%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   W+ Y  A  + W   E+ +  DL  W   N +TD ER  +   L FFA+S+
Sbjct: 83  LFPIRYHEIWQMYKKAEASFWTAEEIDLSKDLYDWD--NRMTDPERHFVSHVLAFFAASD 140

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE----LFNMY 149
            +V  N+V      +   E R +   Q   E +HS T+  +I +  + E E    LFN  
Sbjct: 141 GIVNENLVERFSAEVQATEARCFYGFQIMMENIHSETYSLLIDTY-IREPERRDFLFNAI 199

Query: 150 REVPSITAKANWALQY 165
             VP +  KA+WAL++
Sbjct: 200 ETVPVVKQKADWALRW 215


>gi|75076588|sp|Q4R741|RIR2B_MACFA RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B
 gi|67969468|dbj|BAE01083.1| unnamed protein product [Macaca fascicularis]
          Length = 351

 Score = 71.6 bits (174), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W+ Y  A  + W   EV +  DL  W   N L  DE+  I   L FFA+S+
Sbjct: 44  IFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHW---NKLKADEKYFISHILAFFAASD 100

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +  PE R +   Q   E VHS  +  +I +   D  +   LFN   
Sbjct: 101 GIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIE 160

Query: 151 EVPSITAKANWALQY 165
            +P +  KA+WAL++
Sbjct: 161 TMPYVKKKADWALRW 175


>gi|307192386|gb|EFN75622.1| Ribonucleoside-diphosphate reductase subunit M2 [Harpegnathos
           saltator]
          Length = 344

 Score = 71.6 bits (174), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 74/156 (47%), Gaps = 6/156 (3%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD-DLALWKSKN 72
           ++  N D + +L    +   + P++Y   W+ Y  A  + W   EVP+   D   W+ K 
Sbjct: 10  KEEFNPDLEPLLQEEPNRFVIFPIRYPDIWDMYKKAVASFWTIEEVPLHKLDKKDWEEK- 68

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
            L  DER  I   L FFA+S+ +V  N++    + +   E R +   Q   E +HS  + 
Sbjct: 69  -LNSDERYFISHVLAFFAASDGIVNENLIERFCQEVKISEARCFYGFQIAIENIHSEMYS 127

Query: 133 YIITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
            +I +   D  E   LFN    +P +T KANWAL +
Sbjct: 128 LLIETYISDLKEKDFLFNAIETLPCVTKKANWALNW 163


>gi|90592764|ref|YP_529717.1| RR2B [Agrotis segetum nucleopolyhedrovirus]
 gi|71559214|gb|AAZ38213.1| RR2B [Agrotis segetum nucleopolyhedrovirus]
          Length = 313

 Score = 71.6 bits (174), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 75/144 (52%), Gaps = 6/144 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+++   W  Y  A +  W   EV +  D   + SK  L DDER  IK  L FFA+++
Sbjct: 8   LFPIQHNDLWRAYKQALDCMWKVEEVDLSKDCDDFTSK--LNDDERYFIKHVLAFFAAAD 65

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
           S+V  N++  + +++   E + +  +Q   E VH+  +  +I  L  DE E   L N + 
Sbjct: 66  SIVNINLIEYMQQNVPELEAQYFYNQQVLIECVHTEMYNLLIHQLISDEHERDTLLNAFE 125

Query: 151 EVPSITAKANWALQYTQTLSSPSF 174
            +P +  K +WA+++  + S+ +F
Sbjct: 126 RMPCVRKKTDWAMKWINS-STATF 148


>gi|15617531|ref|NP_258331.1| RR2B [Spodoptera litura NPV]
 gi|15553267|gb|AAL01745.1|AF325155_57 ribonucleotide reductase small subunit homolog [Spodoptera litura
           NPV]
          Length = 333

 Score = 71.2 bits (173), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 6/157 (3%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           N+ D+ +L        + P++Y   W  Y  A  + W   EV +  DL+ W S   L + 
Sbjct: 8   NMSDEPLLQENPRRFVMFPIEYPDIWNMYKKAEASFWTVEEVDLSKDLSDWDS---LKES 64

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           ER  IK  L FFA+S+ +V  N+V    + +   E R +   Q   E VHS  +  +I +
Sbjct: 65  ERNFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQVAIENVHSEMYSLLIDT 124

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
              D  E   LFN    +P+I  KA W++++ ++ ++
Sbjct: 125 YVKDNDEKRRLFNAIETMPAIAKKAEWSIKWIKSATA 161


>gi|42565480|gb|AAS21007.1| ribonucleoside-diphosphate reductase R2 [Hyacinthus orientalis]
          Length = 197

 Score = 71.2 bits (173), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 6/150 (4%)

Query: 19  VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
           V ++ +L    D   + P+KY   WE Y  A  + W   EV +  D   W++   LT DE
Sbjct: 8   VAEEPLLAPNPDRFCMFPIKYPEIWEMYKKAEASFWTAEEVDLSQDTRHWEA---LTADE 64

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           R  I   L FFA+S+ +V  N+     + +   E R +   Q   E +HS  +  ++ S 
Sbjct: 65  RHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLESY 124

Query: 139 GLDEGE---LFNMYREVPSITAKANWALQY 165
             D  E   LF+    +P +  KA WAL++
Sbjct: 125 IKDPDEKNRLFHAIETIPCVAKKAEWALRW 154


>gi|307171465|gb|EFN63309.1| Ribonucleoside-diphosphate reductase subunit M2 [Camponotus
           floridanus]
          Length = 343

 Score = 71.2 bits (173), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 79/168 (47%), Gaps = 11/168 (6%)

Query: 5   TGLSPIQAGEK-----RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEV 59
           +GLS  +A +K       N + + +L    +   + P++Y   W+ Y  A  + W   EV
Sbjct: 40  SGLSKTKAVQKVQLKEEFNPELEPLLQEGPNRFVIFPIQYPDIWDMYKKAVASFWTIEEV 99

Query: 60  PMQD-DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLL 118
           P+   D   W+ K  L  DER  I   L FFA+S+ +V  N++    + +   E R +  
Sbjct: 100 PLHKLDKKDWEEK--LNSDERYFISHVLAFFAASDGIVNENLIERFSQEVKIAEARCFYG 157

Query: 119 RQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWAL 163
            Q   E +HS  +  +I +   D  E   LFN    +PS+  KANWAL
Sbjct: 158 FQIAIENIHSEMYSLLIETYISDPKEKDFLFNAIETLPSVGKKANWAL 205


>gi|118087248|ref|XP_418364.2| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 353

 Score = 71.2 bits (173), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 6/141 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+++   W+ Y  A  + W   EV +  DL  W   N L  DE+  I   L FFA+S+
Sbjct: 46  IFPIQHPDIWKMYKQAQASFWTAEEVDLSKDLPHW---NKLKADEKYFISHVLAFFAASD 102

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +  PE R +   Q   E VHS  +  +I +   D  +   LFN   
Sbjct: 103 GIVNENLVARFSQEVQIPEARCFYGFQILIENVHSEMYSLLIDTYIKDPEKRDFLFNAIE 162

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +P +  KA+WAL++ +   S
Sbjct: 163 TMPCVKKKADWALKWIEDRES 183


>gi|165969130|ref|YP_001651030.1| ribonucleotide reductase small subunit 2 [Orgyia leucostigma NPV]
 gi|164663626|gb|ABY65846.1| ribonucleotide reductase small subunit 2 [Orgyia leucostigma NPV]
          Length = 339

 Score = 71.2 bits (173), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 5/138 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           +LP+++   W  Y +A +  W   EV +  D   W +K  L + ER  IK  L FFAS++
Sbjct: 10  ILPIQHEKLWRAYKTALDCMWKVEEVDLSRDYEDWCTK--LNERERFFIKHILAFFASAD 67

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE---GELFNMYR 150
           S+V  N++  +   +   E R +  +Q   E VHS  +  +I     +E    EL N + 
Sbjct: 68  SIVNINLIDYVRDAVGELEARYFYDQQILIENVHSEMYSLLIFEYIKNEKEQNELLNAFE 127

Query: 151 EVPSITAKANWALQYTQT 168
           +V  +  KA WAL++T++
Sbjct: 128 DVKCVRKKAQWALKWTES 145


>gi|224000239|ref|XP_002289792.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220975000|gb|EED93329.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 335

 Score = 71.2 bits (173), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 67/141 (47%), Gaps = 5/141 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+ Y   W  Y     + W   E+ +  DL+ W  K  L  DER  I   L FFA ++
Sbjct: 15  LFPIAYPDLWSMYKQHVASFWTADEIDLSADLSDWHKK--LNPDERHFISMVLAFFAGAD 72

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG---ELFNMYR 150
            +V  N+     R ++ PE R +   Q   E++H  T+  +I +   D      LF+ + 
Sbjct: 73  GIVVENLAERFCREVTVPEARCFYGFQMAMESIHQETYCLLIDTYITDPKVRERLFSAHA 132

Query: 151 EVPSITAKANWALQYTQTLSS 171
            VPS+  KA+WA +Y  + +S
Sbjct: 133 TVPSVERKASWAQRYIGSKAS 153


>gi|302696699|ref|XP_003038028.1| hypothetical protein SCHCODRAFT_12788 [Schizophyllum commune H4-8]
 gi|300111725|gb|EFJ03126.1| hypothetical protein SCHCODRAFT_12788 [Schizophyllum commune H4-8]
          Length = 377

 Score = 71.2 bits (173), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 5/158 (3%)

Query: 17  VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           +  +D+ +L        L P++Y   W  Y  A  + W   E+ +  D+  W  +  L D
Sbjct: 57  IRAEDEPLLRESQRRFVLFPIQYDDIWAMYKQAQASFWTSEEITLAYDMRDWTER--LDD 114

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
           +ER  IK  L FFA+S+ +V  N+V      +   E R +   Q   E +HS T+  +I 
Sbjct: 115 NERNFIKHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENIHSETYSLLID 174

Query: 137 SLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           +   D  E   LF     +P I  KA+WAL++    SS
Sbjct: 175 TYIKDPQERDHLFAAIETIPCIKRKADWALRWISDKSS 212


>gi|148230557|ref|NP_001080772.1| ribonucleotide reductase M2 polypeptide [Xenopus laevis]
 gi|28839018|gb|AAH47975.1| Rrm2-prov protein [Xenopus laevis]
          Length = 386

 Score = 71.2 bits (173), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 6/161 (3%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           +P     K     D+ +L        + P++Y   W+ Y  A  + W   EV +  D+  
Sbjct: 53  TPTSKVPKNPRFTDEPLLKDNPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDIQH 112

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           W+S   L  DER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +H
Sbjct: 113 WES---LKTDERYFISHVLAFFAASDGIVNENLVERFSKEVQVTEARCFYGFQIAMENIH 169

Query: 128 SHTFQYIITSLGLD---EGELFNMYREVPSITAKANWALQY 165
           S  +  +I +   D    G LFN    +P +  KA+WAL++
Sbjct: 170 SEMYSLLIDTYIKDPKERGFLFNAIETLPCVKKKADWALRW 210


>gi|194883840|ref|XP_001976005.1| GG22616 [Drosophila erecta]
 gi|190659192|gb|EDV56405.1| GG22616 [Drosophila erecta]
          Length = 393

 Score = 71.2 bits (173), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 6/141 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W+ Y  A  + W   EV +  DL  W   + L DDER  I   L FFA+S+
Sbjct: 86  IFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDW---HRLKDDERHFISHVLAFFAASD 142

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +   E R +   Q   E VHS  +  +I +   D  +   LFN   
Sbjct: 143 GIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSVLIDTYIRDPNQREYLFNAIE 202

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +P++  KA+WAL +  + S+
Sbjct: 203 TMPAVKRKADWALSWISSKSA 223


>gi|75224904|sp|Q6Y657|RIR2B_ARATH RecName: Full=Putative ribonucleoside-diphosphate reductase small
           chain B; AltName: Full=Ribonucleoside-diphosphate
           reductase R2B subunit; AltName: Full=Ribonucleotide
           reductase small subunit B
 gi|37729626|gb|AAO62422.1| ribonucleotide reductase small subunit [Arabidopsis thaliana]
          Length = 333

 Score = 71.2 bits (173), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 5/148 (3%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L    D   + P++Y   WE Y  A  + W   EV +  D   W+  N LT+DER 
Sbjct: 6   EEPILTPTPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWE--NSLTNDERH 63

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            IK  L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  ++ +   
Sbjct: 64  FIKHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSEMYSLLLDTYIK 123

Query: 141 DEGE---LFNMYREVPSITAKANWALQY 165
           D  E   LF     +P +T KA WA+++
Sbjct: 124 DNKERDHLFRAIETIPCVTKKAEWAMKW 151


>gi|195119943|ref|XP_002004488.1| GI19586 [Drosophila mojavensis]
 gi|193909556|gb|EDW08423.1| GI19586 [Drosophila mojavensis]
          Length = 393

 Score = 70.9 bits (172), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 6/138 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W+ Y  A  + W   EV +  DL  W     LTD+ER  I   L FFA+S+
Sbjct: 86  IFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWAR---LTDNERHFISHVLAFFAASD 142

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +   E R +   Q   E VHS  +  +I +   D  E   LFN   
Sbjct: 143 GIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYIRDPQERDYLFNAVE 202

Query: 151 EVPSITAKANWALQYTQT 168
            +P++  KA+WAL +  +
Sbjct: 203 TMPAVKRKADWALSWISS 220


>gi|303272255|ref|XP_003055489.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226463463|gb|EEH60741.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 322

 Score = 70.9 bits (172), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 6/148 (4%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           ML    D   L P+K+   W+ Y  A  + W   E+ +  DL  W     LT+ E+  I 
Sbjct: 1   MLQDNEDRFSLFPVKHVEVWKMYKQAVASFWNAEEIDLSTDLRDW---GNLTESEQHFIS 57

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
             L FFA+S+ +V  N+ L   + +  PE R +   Q   E +HS T+  ++ +   D  
Sbjct: 58  HVLAFFAASDGIVLENLGLRFLKDVQMPEARAFYGFQLAMENIHSETYGLLLETYIKDSV 117

Query: 144 E---LFNMYREVPSITAKANWALQYTQT 168
           +   L      VP++  KA WAL++ Q+
Sbjct: 118 QRKHLMRAIHTVPTVGRKAQWALRWIQS 145


>gi|148234092|ref|NP_001079369.1| ribonucleotide reductase M2 B (TP53 inducible) [Xenopus laevis]
 gi|27371032|gb|AAH41209.1| MGC52676 protein [Xenopus laevis]
          Length = 386

 Score = 70.9 bits (172), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 6/161 (3%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           +P     K   ++D+ +L        + P++Y   W+ Y  A  + W   EV +  DL  
Sbjct: 53  TPKSKAPKNPRLEDEPLLKDNPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQH 112

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           W+S   L  +E+  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +H
Sbjct: 113 WES---LKKEEKYFISHVLAFFAASDGIVNENLVERFSKEVQVTEARCFYGFQIAMENIH 169

Query: 128 SHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
           S  +  +I +   D  E   LFN    +P +  KA+WAL +
Sbjct: 170 SEMYSLLIDTYVKDPKEREYLFNAIETLPCVKKKADWALHW 210


>gi|326917964|ref|XP_003205263.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
           [Meleagris gallopavo]
          Length = 353

 Score = 70.9 bits (172), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 6/137 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+++   W+ Y  A  + W   EV +  DL  W   N L  DE+  I   L FFA+S+
Sbjct: 46  IFPIQHPDIWKMYKQAQASFWTAEEVDLSKDLPHW---NKLKPDEKYFISHILAFFAASD 102

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +  PE R +   Q   E VHS  +  +I +   D  +   LFN   
Sbjct: 103 GIVNENLVARFSQEVQIPEARCFYGFQILIENVHSEMYSLLIDTYIKDPEKRDFLFNAIE 162

Query: 151 EVPSITAKANWALQYTQ 167
            +P +  KA+WAL++ +
Sbjct: 163 TMPCVKKKADWALKWIE 179


>gi|294890631|ref|XP_002773236.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
           ATCC 50983]
 gi|239878288|gb|EER05052.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
           ATCC 50983]
          Length = 350

 Score = 70.9 bits (172), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+KY   WE Y     + W   E+ +  DL  W++   L+D++R  I   L FFA+S+
Sbjct: 27  MFPIKYLAIWEMYKKHEASFWTAEEIDLSQDLRDWEN---LSDNDRHFISHVLAFFAASD 83

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +  PE R +   Q   E +HS T+  +I +   D  E   +F    
Sbjct: 84  GIVLENLSAKFSGEVQCPEARAFYGFQIAMENIHSETYSLLIDNYIKDPAEKDKIFRAIE 143

Query: 151 EVPSITAKANWALQY 165
            VPS+  KA WAL +
Sbjct: 144 TVPSVRKKAEWALSW 158


>gi|195436539|ref|XP_002066225.1| GK22247 [Drosophila willistoni]
 gi|194162310|gb|EDW77211.1| GK22247 [Drosophila willistoni]
          Length = 395

 Score = 70.9 bits (172), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 6/138 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W+ Y  A  + W   EV +  DL  W     LTD+ER  I   L FFA+S+
Sbjct: 88  IFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWAR---LTDNERHFISHVLAFFAASD 144

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +   E R +   Q   E VHS  +  +I +   D  E   LFN   
Sbjct: 145 GIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSILIDTYIRDPQERDYLFNAVE 204

Query: 151 EVPSITAKANWALQYTQT 168
            +P++  KA+WAL +  +
Sbjct: 205 TMPAVKRKADWALSWISS 222


>gi|170089003|ref|XP_001875724.1| ribonucleotide reductase, beta subunit [Laccaria bicolor S238N-H82]
 gi|164648984|gb|EDR13226.1| ribonucleotide reductase, beta subunit [Laccaria bicolor S238N-H82]
          Length = 422

 Score = 70.9 bits (172), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 5/135 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   W+ Y  A  + W   E+ +  DL  W   N + D+ER  I   L FFA+S+
Sbjct: 98  LFPIQYNEIWQMYKKAEASFWTAEEMDLSKDLHDWN--NRMNDNERHFISHVLAFFAASD 155

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N++      +   E R +   Q   E +HS T+  +I S   D  +   LF+   
Sbjct: 156 GIVNENLLERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDSYIKDPAQREYLFDAIE 215

Query: 151 EVPSITAKANWALQY 165
            +P I  KA WAL++
Sbjct: 216 TIPCIKRKAEWALKW 230


>gi|146090970|ref|XP_001466408.1| ribonucleoside-diphosphate reductase small chain [Leishmania
           infantum JPCM5]
 gi|134070770|emb|CAM69127.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania infantum JPCM5]
          Length = 388

 Score = 70.9 bits (172), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 17/185 (9%)

Query: 3   NNTGLSPIQAGEKRVNVDD-KRMLNARSDVNQ--------LLPLKYGWAWEKYLSACNNH 53
            N  + P+ AG + +  D      NA  +  Q        L P++Y   W KY    +  
Sbjct: 40  ENLVMKPVAAGAEVLTADKVAEGTNAEEEPLQQENPFRYVLFPIQYHDIWRKYKEQESCI 99

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W   E+ + +D+  W +   L D ER  IK  L FFA S+ +V  N+       +  PE 
Sbjct: 100 WTVEEIDLGNDMKDWAT---LNDGERHFIKHVLAFFAGSDGIVIENLAQRFMSDVKVPEA 156

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLS 170
           R +   Q   E +HS T+  ++ +   D  E   L +  + +P I  KA WA+++    S
Sbjct: 157 RAFYGFQLMMENIHSETYSVLLDTYITDSEEKLRLLHAIQTIPCIQKKAEWAVRWIG--S 214

Query: 171 SPSFH 175
           S SF 
Sbjct: 215 SASFQ 219


>gi|161760549|ref|NP_906664.2| ribonucleotide-diphosphate reductase subunit beta [Wolinella
           succinogenes DSM 1740]
          Length = 341

 Score = 70.9 bits (172), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 72/133 (54%), Gaps = 3/133 (2%)

Query: 19  VDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           V+++++     + + +L  +KY WA+  +     N W P EV M  D   +    GLT  
Sbjct: 16  VNERKIFGGNPTSIFELNKIKYQWAYNLWKVMLANSWFPEEVNMTPDKRDYNG--GLTPA 73

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+L   R L      +SL  NN++  +  ++++PE    L+RQAFEEA+HS ++  ++ S
Sbjct: 74  EKLGYDRALSQLIFMDSLQTNNLIDNVNPYITSPEINLILVRQAFEEALHSQSYAVMVES 133

Query: 138 LGLDEGELFNMYR 150
           +  +  E++ M+R
Sbjct: 134 ISANTDEIYEMWR 146


>gi|19074323|ref|NP_585829.1| RIBONUCLEOSIDE DIPHOSPHATE REDUCTASE SMALL CHAIN [Encephalitozoon
           cuniculi GB-M1]
 gi|51701822|sp|Q8SRR2|RIR2_ENCCU RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|19068965|emb|CAD25433.1| RIBONUCLEOSIDE DIPHOSPHATE REDUCTASE SMALL CHAIN [Encephalitozoon
           cuniculi GB-M1]
          Length = 325

 Score = 70.9 bits (172), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 79/174 (45%), Gaps = 18/174 (10%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +L+ + +   LLP+KY   W+ Y  A ++ W   EV +  D+  W   N     ER  I 
Sbjct: 10  LLDPKEERFVLLPIKYHDIWKMYKKAESSFWTVEEVSLDKDIDDWGKLNA---KERHFIS 66

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
             L FFA+S+ +V  N+V      +   E R +   Q   E +HS  +  +I +   D  
Sbjct: 67  YVLAFFAASDGIVNLNLVERFSTEVKVLEARFFYGFQMAIENIHSEMYSLLIDTYIRDND 126

Query: 144 E---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           E   LF+  R +PS+  KA+WA++            W + + S   TR + F C
Sbjct: 127 EKNFLFDAIRTIPSVKEKADWAIR------------WIEDKNSDFATRLVAFAC 168


>gi|224438210|ref|ZP_03659145.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           cinaedi CCUG 18818]
 gi|313144656|ref|ZP_07806849.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           cinaedi CCUG 18818]
 gi|313129687|gb|EFR47304.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           cinaedi CCUG 18818]
          Length = 348

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 74/138 (53%), Gaps = 3/138 (2%)

Query: 14  EKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
           E + +V D+++     + +  L  +KY WA+  + +   N W P EV +  D   +   +
Sbjct: 18  ESKESVKDRKIFGGNPTSMFDLNKIKYQWAYNLWKTMLANTWFPEEVNLNGDKRDYA--D 75

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
           GLT  E+    R L      +SL  NN++  +  ++++PE    L+RQAFEEA+HS ++ 
Sbjct: 76  GLTAQEKAGYDRALAQLIFMDSLQTNNLIDNVNPYITSPEINLILVRQAFEEALHSQSYA 135

Query: 133 YIITSLGLDEGELFNMYR 150
            ++ S+  +  E++ M+R
Sbjct: 136 VMVESISANTDEIYEMWR 153


>gi|219110949|ref|XP_002177226.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411761|gb|EEC51689.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 409

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 5/141 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+++   W  Y     + W   E+ +  DL  W  +  L D+ER  I   L FFA ++
Sbjct: 96  LFPIEHDDLWGMYKQHVASFWTVDEIDLSADLTDWHER--LNDNERHFISMVLAFFAGAD 153

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+     R ++ PE R +   Q   E +H  T+  +I S   D  +   LF  + 
Sbjct: 154 GIVVENLAERFCREVTVPEARAFYGFQMAMEGIHQETYCLLIDSYISDPKDREMLFAAHT 213

Query: 151 EVPSITAKANWALQYTQTLSS 171
           +VPS+  KA WA +Y  + +S
Sbjct: 214 KVPSVEKKARWAQRYIGSDAS 234


>gi|67906414|gb|AAY82584.1| ribonucleotide reductase subunit 2 [Carassius carassius]
          Length = 246

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W+ Y  A  + W   EV +  DL  W S   L D+ER  I   L FFA+S+
Sbjct: 13  IFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWDS---LKDEERYFISHVLAFFAASD 69

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 70  GIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKERDFLFNAIE 129

Query: 151 EVPSITAKANWALQY 165
            +P +  KA+WAL +
Sbjct: 130 TMPCVKKKADWALNW 144


>gi|224055741|ref|XP_002298630.1| predicted protein [Populus trichocarpa]
 gi|222845888|gb|EEE83435.1| predicted protein [Populus trichocarpa]
          Length = 329

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 6/152 (3%)

Query: 19  VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
           + ++ +L    D   + P++Y   WE Y  A  + W   EV +  D+  W++   LT DE
Sbjct: 4   IPEEPLLAENPDRFCMFPIQYPSIWEMYKKAEASFWTAEEVDLSSDVGHWEN---LTPDE 60

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           +  I   L FFA+S+ +V  NI     + +   E R +   Q   E +HS  +  ++ + 
Sbjct: 61  KHFISHVLAFFAASDGIVLENIAGRFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120

Query: 139 GLDEGE---LFNMYREVPSITAKANWALQYTQ 167
             D  E   LF+    VP +  KA WAL++  
Sbjct: 121 IKDSTEKNRLFHAIETVPCVAKKAEWALRWID 152


>gi|213511642|ref|NP_001133495.1| Ribonucleoside-diphosphate reductase subunit M2 [Salmo salar]
 gi|209154228|gb|ACI33346.1| Ribonucleoside-diphosphate reductase subunit M2 [Salmo salar]
          Length = 387

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+KY   W+ Y  A  + W   EV +  D   W S   L D+ER  I   L FFA+S+
Sbjct: 80  IFPIKYHDIWQMYKKAEASFWTAEEVDLSKDTQHWDS---LKDEERYFISHVLAFFAASD 136

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 137 GIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKERDYLFNAIE 196

Query: 151 EVPSITAKANWALQY 165
            +P +  KA+WAL +
Sbjct: 197 TLPCVKRKADWALNW 211


>gi|225432510|ref|XP_002279943.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 340

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 6/138 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   WE Y  A  + W   EV +  D+  W+S   L++ E+  I   L FFA+S+
Sbjct: 31  MFPIRYRQLWEMYKKAEASFWTAEEVDLSHDVQQWES---LSNSEKHFISHVLAFFAASD 87

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +  PE R +   Q   E +HS  +  ++ +   D  E   LFN   
Sbjct: 88  GIVLENLAARFLHDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIE 147

Query: 151 EVPSITAKANWALQYTQT 168
            +  +  KA WAL + Q+
Sbjct: 148 SISCVAGKAKWALDWIQS 165


>gi|152993970|ref|YP_001359691.1| ribonucleotide-diphosphate reductase subunit beta [Sulfurovum sp.
           NBC37-1]
 gi|151425831|dbj|BAF73334.1| ribonucleoside-diphosphate reductase, beta subunit [Sulfurovum sp.
           NBC37-1]
          Length = 339

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 72/139 (51%), Gaps = 3/139 (2%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
           +L  +KY WA+  +    NN W P EV M  D+  +K    LTD E+    + L      
Sbjct: 30  ELNDIKYQWAYNLWEMMLNNTWFPKEVDMTRDVNDYKR---LTDAEKQAYDKVLAQLIFM 86

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
           +SL  NNI+  +   ++ PE    L+RQAFEEA+HS ++  ++ S+  +  E++ ++R  
Sbjct: 87  DSLQTNNIIDNLNPFITAPEVNLILVRQAFEEALHSQSYAVMVDSISTNSEEIYELWRRD 146

Query: 153 PSITAKANWALQYTQTLSS 171
             + +K +   +  + LS 
Sbjct: 147 MKLKSKNDAIAKVYEELSE 165


>gi|269963257|ref|ZP_06177590.1| hypothetical protein VME_39740 [Vibrio harveyi 1DA3]
 gi|269832005|gb|EEZ86131.1| hypothetical protein VME_39740 [Vibrio harveyi 1DA3]
          Length = 310

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 6/138 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   W+ Y +     W   E+    DLA       LT+ E+  I+  L FFA SE
Sbjct: 9   LFPIQYEEIWQAYKTHEAAFWTTEELDFAQDLA---DLAKLTEGEKHFIRHVLAFFAQSE 65

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            ++  N++   Y  +   E R +L  QAF E +H+ T+   + +   D  E   LFN   
Sbjct: 66  GMINENLLTRFYGEIEIAEARCFLALQAFNEVIHAETYALQLETYIPDVEERERLFNAIE 125

Query: 151 EVPSITAKANWALQYTQT 168
            VP++  KA W +++  +
Sbjct: 126 NVPTVKRKAEWVMKWISS 143


>gi|269105083|ref|ZP_06157778.1| ribonucleotide reductase 2 [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268160718|gb|EEZ39216.1| ribonucleotide reductase 2 [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 310

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 6/138 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   W+ Y +     W   E+    DLA       LT+ E+  I+  L FFA SE
Sbjct: 9   LFPIQYEEIWQAYKTHEAAFWTTEELDFAQDLA---DLAKLTEGEKHFIRHVLAFFAQSE 65

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGE-LFNMYR 150
            ++  N++   Y  +   E R +L  QAF E +H+ T+   + +    ++E E LFN   
Sbjct: 66  GMINENLLTRFYGEIEIAEARCFLALQAFNEVIHAETYALQLETYIPAVEERERLFNAIE 125

Query: 151 EVPSITAKANWALQYTQT 168
            VP++  KA W +++  +
Sbjct: 126 NVPTVKRKAEWVMKWISS 143


>gi|195485577|ref|XP_002091148.1| GE13485 [Drosophila yakuba]
 gi|194177249|gb|EDW90860.1| GE13485 [Drosophila yakuba]
          Length = 393

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 6/141 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W+ Y  A  + W   EV +  DL  W   + L DDER  I   L FFA+S+
Sbjct: 86  IFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDW---HRLKDDERHFISHVLAFFAASD 142

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +   E R +   Q   E VHS  +  +I +   D  +   LFN   
Sbjct: 143 GIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYIRDPHQREYLFNAIE 202

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +P++  KA+WAL +  + S+
Sbjct: 203 TMPAVKRKADWALSWISSKSA 223


>gi|18079279|ref|NP_525111.1| ribonucleoside diphosphate reductase small subunit [Drosophila
           melanogaster]
 gi|12644287|sp|P48592|RIR2_DROME RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|10727628|gb|AAF58599.2| ribonucleoside diphosphate reductase small subunit [Drosophila
           melanogaster]
 gi|15292183|gb|AAK93360.1| LD41588p [Drosophila melanogaster]
 gi|220946286|gb|ACL85686.1| CG8975-PA [synthetic construct]
 gi|220955972|gb|ACL90529.1| RnrS-PA [synthetic construct]
          Length = 393

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 6/141 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W+ Y  A  + W   EV +  DL  W   + L DDER  I   L FFA+S+
Sbjct: 86  IFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDW---HRLKDDERHFISHVLAFFAASD 142

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +   E R +   Q   E VHS  +  +I +   D  +   LFN   
Sbjct: 143 GIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYIRDPHQREYLFNAIE 202

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +P++  KA+WAL +  + S+
Sbjct: 203 TMPAVKRKADWALSWISSKSA 223


>gi|195333568|ref|XP_002033462.1| GM20395 [Drosophila sechellia]
 gi|195582581|ref|XP_002081105.1| GD25870 [Drosophila simulans]
 gi|194125432|gb|EDW47475.1| GM20395 [Drosophila sechellia]
 gi|194193114|gb|EDX06690.1| GD25870 [Drosophila simulans]
          Length = 393

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 6/141 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W+ Y  A  + W   EV +  DL  W   + L DDER  I   L FFA+S+
Sbjct: 86  IFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDW---HRLKDDERHFISHVLAFFAASD 142

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +   E R +   Q   E VHS  +  +I +   D  +   LFN   
Sbjct: 143 GIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYIRDPHQREYLFNAIE 202

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +P++  KA+WAL +  + S+
Sbjct: 203 TMPAVKRKADWALSWISSKSA 223


>gi|325953830|ref|YP_004237490.1| ribonucleoside-diphosphate reductase [Weeksella virosa DSM 16922]
 gi|323436448|gb|ADX66912.1| Ribonucleoside-diphosphate reductase [Weeksella virosa DSM 16922]
          Length = 323

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 5/138 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+++   W+ Y  A  + W   EV +  D+  W++K  L  DER  I   L FFA+S+
Sbjct: 15  IFPIQHDDIWQFYKKAEASFWTAEEVDLSSDMNDWQNK--LNKDERYFISHVLAFFAASD 72

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+ +   + +  PE R +   Q   E +HS  +  +I +   D  E   L     
Sbjct: 73  GIVNENLAVNFVQEVQYPEARFFYGFQIMIENIHSEMYSLLIDTYIKDPKEKDHLLRAIE 132

Query: 151 EVPSITAKANWALQYTQT 168
            +P +  KA+WAL++ ++
Sbjct: 133 TIPCVGKKADWALEWIES 150


>gi|255080138|ref|XP_002503649.1| predicted protein [Micromonas sp. RCC299]
 gi|226518916|gb|ACO64907.1| predicted protein [Micromonas sp. RCC299]
          Length = 324

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 70/148 (47%), Gaps = 6/148 (4%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           ML    D   L P+K    W+ Y  A  + W   E+ +  D   W +   L D+E+  I 
Sbjct: 1   MLQDNEDRFCLFPIKEHAVWKMYKQAEASFWSAEEIDLSMDYKDWVT---LNDNEQHFIS 57

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD-- 141
             L FFA+S+ +V  N+ L   + +  PE R +   Q   E +HS T+  +I +   D  
Sbjct: 58  HVLAFFAASDGIVLENLGLRFMKDVQLPEARAFYAFQLAIENIHSETYGLLIDTYVKDSV 117

Query: 142 -EGELFNMYREVPSITAKANWALQYTQT 168
            +  LF     VP++  KA WAL++ Q+
Sbjct: 118 KKRHLFRAIHNVPTVARKAQWALKWIQS 145


>gi|45360749|ref|NP_989048.1| ribonucleotide reductase M2, gene 1 [Xenopus (Silurana) tropicalis]
 gi|38174078|gb|AAH61353.1| ribonucleotide reductase M2 polypeptide [Xenopus (Silurana)
           tropicalis]
          Length = 378

 Score = 70.5 bits (171), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 6/161 (3%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + D+ +L        +LP++Y   W+ Y  A  + W   EV +  DL  W++   L
Sbjct: 52  KDPRIQDEPLLRDNPGRFVILPIEYHDIWQMYKKAEASFWTAEEVDLSKDLPHWEA---L 108

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
             +ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +
Sbjct: 109 KPEERYFISYVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLL 168

Query: 135 ITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSP 172
           I +   D  E   LFN    +P +  KA WAL++     +P
Sbjct: 169 IDTYIKDPKEREFLFNAIETLPCVKKKAEWALRWISDREAP 209


>gi|298713498|emb|CBJ27053.1| Ribonucleoside-diphosphate reductase small chain [Ectocarpus
           siliculosus]
          Length = 504

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 70/135 (51%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+K+   W+ Y  A  + W   EV +  D   W++   LT +E+  I   L FFA+S+
Sbjct: 193 LFPIKHPELWDMYKKAKASFWTVEEVDLSQDSRDWEA---LTGNEQHFISMVLAFFAASD 249

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +  PE R +   Q   E++H   +  ++ +   D+ E   LFN Y 
Sbjct: 250 GIVMENLVERFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDKQERDNLFNAYN 309

Query: 151 EVPSITAKANWALQY 165
           ++P +  KA+WA+++
Sbjct: 310 DIPCVKQKADWAMRW 324


>gi|169860861|ref|XP_001837065.1| ribonucleotide reductase small subunit [Coprinopsis cinerea
           okayama7#130]
 gi|116501787|gb|EAU84682.1| ribonucleotide reductase small subunit [Coprinopsis cinerea
           okayama7#130]
          Length = 414

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 5/133 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   W+ Y  A  + W   E+ +  DL  W   N L D+ER  I   L FFA+S+
Sbjct: 95  LFPIQYHEIWQMYKKAEASFWTAEEMDLSKDLHDWN--NKLNDNERHFISHVLAFFAASD 152

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N++      +   E R +   Q   E +HS T+  +I +   D  +   LF+   
Sbjct: 153 GIVNENLLERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIKDPAQRDYLFDAVD 212

Query: 151 EVPSITAKANWAL 163
            +P I  KA+WAL
Sbjct: 213 TIPCIKKKADWAL 225


>gi|194755279|ref|XP_001959919.1| GF11796 [Drosophila ananassae]
 gi|190621217|gb|EDV36741.1| GF11796 [Drosophila ananassae]
          Length = 393

 Score = 70.1 bits (170), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 6/141 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W+ Y  A  + W   EV +  DL  W   + L DDER  I   L FFA+S+
Sbjct: 86  IFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDW---HRLKDDERHFISHVLAFFAASD 142

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +   E R +   Q   E VHS  +  +I +   D  +   LFN   
Sbjct: 143 GIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSVLIDTYIRDPHQREYLFNAIE 202

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +P++  KA+WAL +  + S+
Sbjct: 203 TMPAVKRKADWALAWISSKSA 223


>gi|266918|sp|P07201|RIR2_SPISO RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit;
           AltName: Full=p41
 gi|10342|emb|CAA38919.1| M2 (small) subunit of ribonucleotide reductase [Spisula
           solidissima]
          Length = 384

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 70/141 (49%), Gaps = 6/141 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           +LP++Y   W+ Y  A  + W   EV +  D+A W+S   L  +E+  I   L FFA+S+
Sbjct: 74  VLPIQYHDIWKMYKKAEASFWTAEEVDLSKDMAHWES---LKKEEKHFISHVLAFFAASD 130

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 131 GIVNENLVERFSKEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPQERDFLFNAIE 190

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +P +  KA+WA+++    SS
Sbjct: 191 TMPCVKEKADWAMRWINDDSS 211


>gi|71033209|ref|XP_766246.1| ribonucleotide-diphosphate reductase small subunit [Theileria parva
           strain Muguga]
 gi|68353203|gb|EAN33963.1| ribonucleotide-diphosphate reductase small subunit, putative
           [Theileria parva]
          Length = 308

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 6/145 (4%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +LN   +   L P+ Y   WE Y  A  + W   E+    D   W   + L  DER 
Sbjct: 7   EEFLLNRNPNRTSLFPIVYPEFWEWYKKAQASFWTAEEIDFSMDYNHW---HRLNKDERH 63

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I   L FFA+S+ +V  N+ L   R +  PE + +   Q   E +HS T+  +I +   
Sbjct: 64  FITNVLAFFAASDGIVLENLALKFLRDVKIPEAQSFYSFQIAVENIHSETYSLLIENYVK 123

Query: 141 DEGE---LFNMYREVPSITAKANWA 162
           DE E   LF     + ++  KANWA
Sbjct: 124 DEAEKRRLFMAIETIDAVKDKANWA 148


>gi|297668213|ref|XP_002812343.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Pongo abelii]
          Length = 449

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 6/151 (3%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           +V+D+ +L        + P++Y   W+ Y  A  + W   EV +  D+  W+S   L  +
Sbjct: 126 DVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWES---LKPE 182

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +I +
Sbjct: 183 ERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDT 242

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQY 165
              D  E   LFN    +P +  KA+WAL++
Sbjct: 243 YIKDPKEREFLFNAIETLPCVKKKADWALRW 273


>gi|327269406|ref|XP_003219485.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
           [Anolis carolinensis]
          Length = 414

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 65/137 (47%), Gaps = 6/137 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+ Y   W+ Y  A  + W   EV +  D   W   N L  +E+  I   L FFA+S+
Sbjct: 107 IFPIHYPDIWKMYKKAQASFWTAEEVDLSKDFPHW---NKLKSEEKYFISHILAFFAASD 163

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +  PE R +   Q   E VHS  +  +I +   D  E   LFN   
Sbjct: 164 GIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIKDPEERDFLFNAIE 223

Query: 151 EVPSITAKANWALQYTQ 167
            +P +  KA+WAL++ +
Sbjct: 224 TMPCVKKKADWALRWIR 240


>gi|312599293|gb|ADQ91316.1| hypothetical protein BpV2_149c [Bathycoccus sp. RCC1105 virus BpV2]
          Length = 387

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+K+   W  Y  A  ++W   E+    D+  W   NGL+D+E+  IK  L FFA S+
Sbjct: 85  VFPIKHENLWSLYKKAQMSNWTAEEIDFSKDMDDW---NGLSDNEKHFIKYILAFFAGSD 141

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL---GLDEGELFNMYR 150
            +V  NI       +   E R +   QA  E VH  T+  +I        ++ +LF   +
Sbjct: 142 GIVFENINNNFADEIQLTEARSFYAYQAHNEMVHGETYSKLIDKYIKSSTEKNQLFEAIQ 201

Query: 151 EVPSITAKANWALQY 165
            +P I  KA WA+++
Sbjct: 202 TIPCIERKAKWAMKW 216


>gi|302833193|ref|XP_002948160.1| hypothetical protein VOLCADRAFT_101784 [Volvox carteri f.
           nagariensis]
 gi|300266380|gb|EFJ50567.1| hypothetical protein VOLCADRAFT_101784 [Volvox carteri f.
           nagariensis]
          Length = 354

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 5/154 (3%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           D+ +L    +   L P++Y   WE Y  A  + W   EV    DL  +  K  L ++ER 
Sbjct: 24  DEAVLRENPNRFTLFPIRYPDLWEFYKRAVASFWTVEEVDFTGDLYDFDHK--LKEEERR 81

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            IK  L FFA+S+ +V  N+       +  PE R +   Q   E VHS  +  ++     
Sbjct: 82  FIKYVLAFFAASDGIVMENLSARFMSEVQVPEARAFYGFQIAMENVHSEMYSVLLDHYVR 141

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           D  E   LFN  + + ++  KA+WAL++  + +S
Sbjct: 142 DPAERRQLFNAIQTIATVGKKADWALRWISSSNS 175


>gi|8101697|gb|AAF72618.1|AF252539_2 ribonucleotide reductase small subunit M2 [Leishmania amazonensis]
          Length = 345

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 17/181 (9%)

Query: 7   LSPIQAGEKRVNVDD-KRMLNARSDVNQ--------LLPLKYGWAWEKYLSACNNHWMPT 57
           + P+ AG + +  D   +  NA  +  Q        L P++Y   W KY    +  W   
Sbjct: 1   MKPVAAGAEVLPADKVAQGTNAEEEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVE 60

Query: 58  EVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYL 117
           E+ + +D+  W +   L D ER  IK  L FFA S+ +V  N+       +  PE R + 
Sbjct: 61  EIDLGNDMKDWAT---LNDGERHFIKHVLAFFAGSDGIVIENLAQRFMSDVKVPEARAFY 117

Query: 118 LRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSF 174
             Q   E +HS T+  ++ +   D  E   L +  + +P I  KA WA+++    SS SF
Sbjct: 118 GFQLMMENIHSETYSVLLDTYITDSEEKLRLLHAIQTIPCIQKKAEWAVRWIG--SSASF 175

Query: 175 H 175
            
Sbjct: 176 Q 176


>gi|74207686|dbj|BAE40088.1| unnamed protein product [Mus musculus]
          Length = 390

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 6/151 (3%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           +V+D+ +L        + P++Y   W+ Y  A  + W   EV +  D+  W++   L  D
Sbjct: 67  SVEDEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEA---LKPD 123

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +I +
Sbjct: 124 ERHFISHALAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDT 183

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQY 165
              D  E   LFN    +P +  KA+WAL++
Sbjct: 184 YIKDPKEREYLFNAIETMPCVKKKADWALRW 214


>gi|315452596|ref|YP_004072866.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter felis
           ATCC 49179]
 gi|315131648|emb|CBY82276.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter felis
           ATCC 49179]
          Length = 347

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 74/141 (52%), Gaps = 6/141 (4%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           D+NQ+   KY WA + + +  +N W P EV M  D   +     L+  E++   R L   
Sbjct: 38  DLNQI---KYQWAHKIWKTMLHNTWFPEEVSMHGDKTHYLK---LSTQEKIGYDRALAQL 91

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY 149
              +SL  NN++  I   +++PE    L+RQA+EEA+HSH++  ++ S+  +  E++ M+
Sbjct: 92  IFMDSLQTNNLIDNINPFITSPEINLCLVRQAYEEALHSHSYAVMVESISANSDEIYEMW 151

Query: 150 REVPSITAKANWALQYTQTLS 170
           R   ++  K +   Q    L+
Sbjct: 152 RTDEALKNKNDCVAQVYMDLA 172


>gi|297805560|ref|XP_002870664.1| ribonucleoside-diphosphate reductase [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316500|gb|EFH46923.1| ribonucleoside-diphosphate reductase [Arabidopsis lyrata subsp.
           lyrata]
          Length = 333

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 5/148 (3%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L    D   + P++Y   WE Y  A  + W   EV +  D   W+  N L++DER 
Sbjct: 6   EEPILTPTPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWE--NSLSNDERH 63

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            IK  L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  ++ +   
Sbjct: 64  FIKHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSEMYSLLLDTYIK 123

Query: 141 DEGE---LFNMYREVPSITAKANWALQY 165
           D  E   LF     +P +T KA WA+++
Sbjct: 124 DNKERDHLFRAIETIPCVTKKAEWAMKW 151


>gi|149637725|ref|XP_001508783.1| PREDICTED: similar to Ribonucleotide reductase M2 B (TP53
           inducible) [Ornithorhynchus anatinus]
          Length = 401

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W+ Y  A  + W   EV +  DL  W   N L  +E+  I   L FFA+S+
Sbjct: 94  IFPIQYPEIWKMYKQAQASFWTAEEVDLSKDLPHW---NKLKSEEKYFISHILAFFAASD 150

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +  PE R +   Q   E VHS  +  +I +   D  +   LFN   
Sbjct: 151 GIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIKDPKKREFLFNAIE 210

Query: 151 EVPSITAKANWALQY 165
            +P +  KA+W+L++
Sbjct: 211 TMPFVKKKADWSLRW 225


>gi|215401441|ref|YP_002332744.1| RR2b [Spodoptera litura nucleopolyhedrovirus II]
 gi|209483982|gb|ACI47415.1| RR2b [Spodoptera litura nucleopolyhedrovirus II]
          Length = 313

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 5/137 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+++   W  Y  A +  W   EV +  D   +  K  LTD+ER  I++ L FFA+++
Sbjct: 8   LFPIQHIDLWTAYKQALDCMWKVEEVDLSKDYDDFTQK--LTDNERNFIEKILAFFAAAD 65

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE---GELFNMYR 150
           S+V  NI+  + R +   E + +  +Q   E +H+  +  +I +L  DE     L N + 
Sbjct: 66  SIVNINIIEHMQRTVPELEAQYFYNQQVLIECIHTEMYNLLIHALIKDEEKQATLLNGFE 125

Query: 151 EVPSITAKANWALQYTQ 167
            +P +  KA WA++Y +
Sbjct: 126 SMPCVRRKAEWAMKYIE 142


>gi|322491821|emb|CBZ27094.1| ribonucleoside-diphosphate reductase small chain,putative
           [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 392

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 82/186 (44%), Gaps = 17/186 (9%)

Query: 2   ANNTGLSPIQAGEKRVNVDD-KRMLNARSDVNQ--------LLPLKYGWAWEKYLSACNN 52
           A +  + P+  G + + VD      NA  +  Q        L P++Y   W KY    + 
Sbjct: 43  AEDLVMKPVAPGAEVLPVDKVAEGTNAEEEPLQQENPFRYVLFPIQYHDIWRKYKEQESC 102

Query: 53  HWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPE 112
            W   E+ + +D+  W +   L D ER  IK  L FFA S+ +V  N+       +  PE
Sbjct: 103 IWTVEEIDLGNDMKDWAA---LNDGERHFIKHVLAFFAGSDGIVVENLAQRFMSDVKVPE 159

Query: 113 CRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTL 169
            R +   Q   E +HS T+  ++ +   D  E   L +  + +P I  KA WA+++    
Sbjct: 160 ARAFYGFQLMMENIHSETYSVLLDTYITDSEEKLRLLHAIQTIPCIQRKAEWAVRWIG-- 217

Query: 170 SSPSFH 175
           SS SF 
Sbjct: 218 SSASFQ 223


>gi|9633826|ref|NP_051904.1| gp015L [Rabbit fibroma virus]
 gi|6578545|gb|AAF17899.1|AF170722_17 gp015L [Rabbit fibroma virus]
          Length = 322

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 6/147 (4%)

Query: 19  VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
           ++D+ +L    D   + P++Y   W+ Y  A  + W P EV +  DL  W   + LT DE
Sbjct: 1   MEDEPVLKESLDRYVVFPIQYNDIWKMYKKAVASFWTPEEVDISKDLKDW---HILTSDE 57

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           +  IK  L FFA+S+ +V  N+    Y  +   E R +   Q   E +HS  +  +I + 
Sbjct: 58  KYFIKHILAFFAASDGIVNENLAERFYVEVQIAEARCFYGFQIAIENIHSEMYSLLIDTY 117

Query: 139 GLDEGE---LFNMYREVPSITAKANWA 162
            +D  E   LF     +  I  KA W 
Sbjct: 118 IIDIQEKEKLFKAIETMDCIKQKAEWV 144


>gi|301772278|ref|XP_002921557.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Ailuropoda melanoleuca]
          Length = 393

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 6/151 (3%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           +V+D+ +L        + P++Y   W+ Y  A  + W   EV +  D+  W+S   L  +
Sbjct: 70  SVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWES---LKPE 126

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +I +
Sbjct: 127 ERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDT 186

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQY 165
              D  E   LFN    +P +  KA+WAL++
Sbjct: 187 YIKDSKEREFLFNAIETMPCVKKKADWALRW 217


>gi|9633651|ref|NP_051729.1| ribonucleotide reductase, small subunit [Myxoma virus]
 gi|6523870|gb|AAF14903.1|AF170726_19 ribonucleotide reductase, small subunit [Myxoma virus]
 gi|301134541|gb|ADK63655.1| M015L [Myxoma virus]
          Length = 322

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 6/147 (4%)

Query: 19  VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
           ++D+ +L    D   + P++Y   W  Y  A  + W P EV +  DL  W+    LT DE
Sbjct: 1   MEDEPVLKESLDRYVVFPIQYNDIWNMYKKAVASFWTPEEVDISKDLKDWRV---LTPDE 57

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           +  IK  L FFA+S+ +V  N+    Y  +   E R +   Q   E +HS  +  +I + 
Sbjct: 58  KYFIKHILAFFAASDGIVNENLAERFYVEVQIAEARCFYGFQIAMENIHSEMYSLLIDTY 117

Query: 139 GLDEGE---LFNMYREVPSITAKANWA 162
            +D  E   LF     +  I  KA W 
Sbjct: 118 IIDLQEKEKLFKAIETMDCIKQKAEWV 144


>gi|260064013|ref|NP_001159403.1| ribonucleoside-diphosphate reductase subunit M2 isoform 1 [Homo
           sapiens]
          Length = 449

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 6/151 (3%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
            V+D+ +L        + P++Y   W+ Y  A  + W   EV +  D+  W+S   L  +
Sbjct: 126 GVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWES---LKPE 182

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +I +
Sbjct: 183 ERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDT 242

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQY 165
              D  E   LFN    +P +  KA+WAL++
Sbjct: 243 YIKDPKEREFLFNAIETMPCVKKKADWALRW 273


>gi|119621373|gb|EAX00968.1| hCG23833, isoform CRA_b [Homo sapiens]
 gi|119621374|gb|EAX00969.1| hCG23833, isoform CRA_b [Homo sapiens]
          Length = 449

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 6/151 (3%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
            V+D+ +L        + P++Y   W+ Y  A  + W   EV +  D+  W+S   L  +
Sbjct: 126 GVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWES---LKPE 182

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +I +
Sbjct: 183 ERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDT 242

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQY 165
              D  E   LFN    +P +  KA+WAL++
Sbjct: 243 YIKDPKEREFLFNAIETMPCVKKKADWALRW 273


>gi|254517517|ref|ZP_05129573.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium sp.
           7_2_43FAA]
 gi|226911266|gb|EEH96467.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium sp.
           7_2_43FAA]
          Length = 344

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 93/204 (45%), Gaps = 35/204 (17%)

Query: 22  KRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           KRM+N  + ++N    +KY W  + Y  A NN W+P E+ +  DL   K  N LT+DER 
Sbjct: 20  KRMINGNTTNLNDFNNMKYTWVSDWYRQAMNNFWIPEEINLAQDL---KDYNKLTNDERT 76

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
              + L F    +S+   N+   I  +++  E    L  QAF+EAVHS ++ Y++ ++  
Sbjct: 77  AYDKILSFLIFLDSIQTANLS-NINNYITASEVNLCLTIQAFQEAVHSQSYSYMLDTICS 135

Query: 141 DE----------------------GELFNMYREVPS-----ITAKANWALQYTQTLSSPS 173
            E                      GEL+N + E P+      T  AN+ L+     S   
Sbjct: 136 PEKRNEILYQWKDDKILLERNKFIGELYNNFLEAPTQENLIKTIMANYILEGIYFYSGFM 195

Query: 174 FHYWNKRRRSRI--LTRSLRFLCR 195
           F Y N  R  ++    + +R++ R
Sbjct: 196 FFY-NLERNGKMPGSAQEIRYINR 218


>gi|212274629|ref|NP_001130908.1| hypothetical protein LOC100192012 [Zea mays]
 gi|195636980|gb|ACG37958.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
          Length = 339

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 5/147 (3%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +L   SD   + P++Y   WE Y  A  + W   EV +  D   W +   L+ DER  I 
Sbjct: 17  LLAESSDRFSMFPIRYPQIWEFYKKAVASFWTAEEVDLSADARHWDA--ALSPDERHFIS 74

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL---GL 140
             L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  ++ +    G 
Sbjct: 75  HVLAFFAASDGIVLENLASRFMSDVQAAEARAFYGFQIAIENIHSEMYSLLLETYIRDGT 134

Query: 141 DEGELFNMYREVPSITAKANWALQYTQ 167
           ++  LF     VP++  KA+WA+++  
Sbjct: 135 EKDRLFRAIETVPAVRRKADWAMRWID 161


>gi|218289144|ref|ZP_03493380.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218240727|gb|EED07906.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 345

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 60/102 (58%), Gaps = 4/102 (3%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA++ Y +  NN W+P E+P+ DD    +  + L+DDER    + L F    +SL+
Sbjct: 36  IKYEWAYKLYRAMMNNFWIPEEIPLADDA---RQYDLLSDDERRSYNKVLSFLIFMDSLL 92

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            +N+   I  +++ PE    L   AF+EAVHS ++ Y++ S+
Sbjct: 93  THNLP-NINEYITAPEVNLCLTVHAFQEAVHSQSYGYVLDSV 133


>gi|294950175|ref|XP_002786498.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
           ATCC 50983]
 gi|239900790|gb|EER18294.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
           ATCC 50983]
          Length = 350

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+KY   WE Y     + W   E+ +  DL  W++   L+D++R  I   L FFA+S+
Sbjct: 27  MFPIKYLAIWEMYKKHEASFWTAEEIDLSQDLRDWEN---LSDNDRHFISHVLAFFAASD 83

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD---EGELFNMYR 150
            +V  N+       +  PE R +   Q   E +HS T+  +I +   D   + ++F    
Sbjct: 84  GIVLENLSAKFSGEVQCPEARAFYGFQIAMENIHSETYSLLIDNYIKDPEQKDKIFRAIE 143

Query: 151 EVPSITAKANWALQY 165
            VPS+  KA WAL +
Sbjct: 144 TVPSVRKKAEWALSW 158


>gi|156545974|ref|XP_001606963.1| PREDICTED: similar to ENSANGP00000013211 [Nasonia vitripennis]
          Length = 388

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+++   W  Y  A  + W   EV +  D+A W   N L D+ER  I   L FFA+S+
Sbjct: 79  LFPIQWPDIWHMYKKAEASFWTVEEVDLSKDMADW---NRLNDNERHFISHVLAFFAASD 135

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +   E R +   Q   E +HS  +  +I +   D  +   LFN   
Sbjct: 136 GIVNENLVERFSQEVQVTEARCFYGFQVAIENIHSEMYSLLIDTYISDASQRQFLFNAIE 195

Query: 151 EVPSITAKANWALQY 165
            +P +  KANWAL +
Sbjct: 196 TLPCVAKKANWALNW 210


>gi|327403795|ref|YP_004344633.1| Ribonucleoside-diphosphate reductase [Fluviicola taffensis DSM
           16823]
 gi|327319303|gb|AEA43795.1| Ribonucleoside-diphosphate reductase [Fluviicola taffensis DSM
           16823]
          Length = 324

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 5/135 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+++   W  Y  A  + W   E+ +  DL  W++K  L+DDER  +K  L FFA+S+
Sbjct: 17  LFPIQHEDIWSFYKKAEASFWTAEEIDLSPDLIDWETK--LSDDERHFVKHVLAFFAASD 74

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +   E + +   Q   E +HS T+  +I +   D+ E   LFN   
Sbjct: 75  GIVNENLAEHFLAEVQYTEAKFFYGFQVAMENIHSETYSLLIDTYIKDQKEKNHLFNALD 134

Query: 151 EVPSITAKANWALQY 165
            +  +  KA+WAL++
Sbjct: 135 TIDCVRKKADWALRW 149


>gi|327261311|ref|XP_003215474.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           isoform 2 [Anolis carolinensis]
          Length = 390

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 6/151 (3%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           N  D+ +L        + P++Y   W+ Y  A  + W   EV +  DL  W+S   L  D
Sbjct: 67  NAQDEPLLRDNPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWES---LKPD 123

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +I +
Sbjct: 124 EKYFISHILAFFAASDGIVNENLVERFSQEIQVTEARCFYGFQIAMENIHSEMYSLLIDT 183

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQY 165
              D  E   LFN    +P +  KA+WA+++
Sbjct: 184 YIKDPKEREYLFNAIETLPCVKRKADWAMRW 214


>gi|221060582|ref|XP_002260936.1| ribonucleotide reductase small subunit [Plasmodium knowlesi strain
           H]
 gi|193811010|emb|CAQ42908.1| ribonucleotide reductase small subunit,putative [Plasmodium
           knowlesi strain H]
          Length = 349

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 6/154 (3%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++++L+  +D   L P+ Y   W+ Y  A  + W   E+ +  DL   K    L ++E+ 
Sbjct: 30  NEKILSKETDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDL---KDFEKLNENEKH 86

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            IK  L FFA+S+ +V  N+     R +   E +++   Q   E +HS T+  +I +   
Sbjct: 87  FIKHVLAFFAASDGIVLENLASKFLRQVQITEAKKFYSFQIAVENIHSETYSLLIDNYIK 146

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           DE E   LF+    +P++  KA WA ++    +S
Sbjct: 147 DEKERMNLFHAIENIPAVKNKALWAAKWINDTNS 180


>gi|296809816|ref|XP_002845246.1| ribonucleotide reductase [Arthroderma otae CBS 113480]
 gi|238842634|gb|EEQ32296.1| ribonucleotide reductase [Arthroderma otae CBS 113480]
          Length = 405

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 68/141 (48%), Gaps = 8/141 (5%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY    E Y  A  + W   E+ +  D+  W   N L DDER  I   L FFA+S+
Sbjct: 89  LFPIKY---HEMYKKAEASFWTAEEIDLSKDIHDWN--NRLNDDERFFISHVLAFFAASD 143

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N++      +  PE R +   Q   E +HS T+  +I +   ++ +   LF    
Sbjct: 144 GIVNENLLERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEQKQRTYLFEAID 203

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +P I  KA+WA+++ Q   S
Sbjct: 204 TIPCIRKKADWAIRWIQDKDS 224


>gi|221120499|ref|XP_002159812.1| PREDICTED: similar to hCG23833 [Hydra magnipapillata]
          Length = 387

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 5/135 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   W+ Y  A  + W   EV +  D   W+ K  L   E+  I   L FFA+S+
Sbjct: 72  LFPIQYKDIWKMYKQAEASFWTVEEVDLAADAVHWEEK--LKPQEKYFISHVLAFFAASD 129

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL---GLDEGELFNMYR 150
            +V  N+V    + +  PE R +   Q   E +HS  +  +I +L    +++  LFN   
Sbjct: 130 GIVNENLVECFSQEVQLPEARAFYGFQIAIENIHSEMYSLLIDTLIKDPIEKSNLFNAIE 189

Query: 151 EVPSITAKANWALQY 165
            +P +  KA WAL++
Sbjct: 190 TMPCVQKKAVWALKW 204


>gi|73544537|ref|XP_848163.1| ribonucleoside-diphosphate reductase small chain [Leishmania major
           strain Friedlin]
 gi|321438516|emb|CBZ12275.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania major strain Friedlin]
          Length = 388

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 17/181 (9%)

Query: 7   LSPIQAGEKRVNVDD-KRMLNARSDVNQ--------LLPLKYGWAWEKYLSACNNHWMPT 57
           + P+ AG + +  D      NA  +  Q        L P++Y   W KY    +  W   
Sbjct: 44  MKPVAAGAEVLPADKVAEGTNAEEEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVE 103

Query: 58  EVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYL 117
           E+ + +D+  W +   L D ER  IK  L FFA S+ +V  N+       +  PE R + 
Sbjct: 104 EIDLGNDMKDWAT---LNDGERHFIKHVLAFFAGSDGIVIENLAQRFMSDVKVPEARAFY 160

Query: 118 LRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSF 174
             Q   E +HS T+  ++ +   D  E   L +  + +P I  KA WA+++    SS SF
Sbjct: 161 GFQLMMENIHSETYSVLLDTYITDSEEKLRLLHAIQTIPCIQKKAEWAVRWIG--SSASF 218

Query: 175 H 175
            
Sbjct: 219 Q 219


>gi|71024571|ref|XP_762515.1| hypothetical protein UM06368.1 [Ustilago maydis 521]
 gi|46101992|gb|EAK87225.1| hypothetical protein UM06368.1 [Ustilago maydis 521]
          Length = 424

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 7/136 (5%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+++   W+ Y  A  + W   E+ +  DL  W +K  L D+ER  I   L FFA+S+
Sbjct: 106 LFPIRFHEIWQMYKKAEASFWTAEEIDLSKDLHDWDNK--LNDNERHFISHVLAFFAASD 163

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE----LFNMY 149
            +V  N+V      +   E R +   Q   E +HS T+  +I +  + E E    LF+  
Sbjct: 164 GIVNENLVERFSSEVQAAEARCFYGFQIMMENIHSETYSLLIDTY-IREPEQREYLFDAV 222

Query: 150 REVPSITAKANWALQY 165
             +P +  KA+WAL++
Sbjct: 223 ETIPVVKQKADWALRW 238


>gi|258511567|ref|YP_003185001.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257478293|gb|ACV58612.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 369

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 60/102 (58%), Gaps = 4/102 (3%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA++ Y +  NN W+P E+P+ DD    +  + L+DDER    + L F    +SL+
Sbjct: 60  IKYEWAYKLYRAMMNNFWIPEEIPLADDA---RQYDLLSDDERRSYNKVLSFLIFMDSLL 116

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            +N+   I  +++ PE    L   AF+EAVHS ++ Y++ S+
Sbjct: 117 THNLP-NINEYITAPEVNLCLTVHAFQEAVHSQSYGYVLDSV 157


>gi|148705043|gb|EDL36990.1| ribonucleotide reductase M2 [Mus musculus]
          Length = 411

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 6/151 (3%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           +V+D+ +L        + P++Y   W+ Y  A  + W   EV +  D+  W++   L  D
Sbjct: 88  SVEDEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEA---LKPD 144

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +I +
Sbjct: 145 ERHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDT 204

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQY 165
              D  E   LFN    +P +  KA+WAL++
Sbjct: 205 YIKDPKEREYLFNAIETMPCVKKKADWALRW 235


>gi|3220181|gb|AAC23560.1| ribonucleotide reductase M2 subunit [Leishmania amazonensis]
          Length = 354

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 17/181 (9%)

Query: 7   LSPIQAGEKRVNVDD-KRMLNARSDVNQ--------LLPLKYGWAWEKYLSACNNHWMPT 57
           + P+ AG + +  D      NA  +  Q        L P++Y   W KY    +  W   
Sbjct: 10  MKPVAAGAEVLPADKVAEGTNAEEEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVE 69

Query: 58  EVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYL 117
           E+ + +D+  W +   L D ER  IK  L FFA S+ +V  N+       +  PE R + 
Sbjct: 70  EIDLGNDMKDWAA---LNDGERHFIKHVLAFFAGSDGIVVENLAQRFMSDVKVPEARAFY 126

Query: 118 LRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSF 174
             Q   E +HS T+  ++ +   D  E   L +  + +P I  KA WA+++    SS SF
Sbjct: 127 GFQLMMENIHSETYSVLLDTYITDSEEKLRLLHAIQTIPCIQRKAEWAVRWIG--SSASF 184

Query: 175 H 175
            
Sbjct: 185 Q 185


>gi|7106399|ref|NP_033130.1| ribonucleoside-diphosphate reductase subunit M2 [Mus musculus]
 gi|132626|sp|P11157|RIR2_MOUSE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|22218698|pdb|1H0N|A Chain A, Cobalt Substitution Of Mouse R2 Ribonucleotide Reductase
           To Model The Reactive Diferrous State
 gi|22218699|pdb|1H0O|A Chain A, Cobalt Substitution Of Mouse R2 Ribonucleotide Reductase
           To Model The Reactive Diferrous State
 gi|52696260|pdb|1W68|A Chain A, Crystal Structure Of Mouse Ribonucleotide Reductase
           Subunit R2 Under Oxidizing Conditions. A Fully Occupied
           Dinuclear Iron Cluster.
 gi|52696261|pdb|1W69|A Chain A, Crystal Structure Of Mouse Ribonucleotide Reductase
           Subunit R2 Under Reducing Conditions. A Fully Occupied
           Dinuclear Iron Cluster And Bound Acetate.
 gi|157834262|pdb|1XSM|A Chain A, Protein R2 Of Ribonucleotide Reductase From Mouse
 gi|50720|emb|CAA33707.1| M2 ribonucleotide reductase [Mus musculus]
 gi|200768|gb|AAA40062.1| ribonucleotide reductase subunit M2 [Mus musculus]
 gi|26354034|dbj|BAC40647.1| unnamed protein product [Mus musculus]
 gi|54887418|gb|AAH85136.1| Ribonucleotide reductase M2 [Mus musculus]
 gi|74139292|dbj|BAE40793.1| unnamed protein product [Mus musculus]
 gi|74151119|dbj|BAE27683.1| unnamed protein product [Mus musculus]
 gi|74179887|dbj|BAE36508.1| unnamed protein product [Mus musculus]
 gi|74188932|dbj|BAE39238.1| unnamed protein product [Mus musculus]
 gi|74189151|dbj|BAE39331.1| unnamed protein product [Mus musculus]
 gi|74206394|dbj|BAE24918.1| unnamed protein product [Mus musculus]
 gi|74211991|dbj|BAE40165.1| unnamed protein product [Mus musculus]
          Length = 390

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 6/151 (3%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           +V+D+ +L        + P++Y   W+ Y  A  + W   EV +  D+  W++   L  D
Sbjct: 67  SVEDEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEA---LKPD 123

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +I +
Sbjct: 124 ERHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDT 183

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQY 165
              D  E   LFN    +P +  KA+WAL++
Sbjct: 184 YIKDPKEREYLFNAIETMPCVKKKADWALRW 214


>gi|327261309|ref|XP_003215473.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           isoform 1 [Anolis carolinensis]
          Length = 394

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 6/151 (3%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           N  D+ +L        + P++Y   W+ Y  A  + W   EV +  DL  W+S   L  D
Sbjct: 71  NAQDEPLLRDNPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWES---LKPD 127

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +I +
Sbjct: 128 EKYFISHILAFFAASDGIVNENLVERFSQEIQVTEARCFYGFQIAMENIHSEMYSLLIDT 187

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQY 165
              D  E   LFN    +P +  KA+WA+++
Sbjct: 188 YIKDPKEREYLFNAIETLPCVKRKADWAMRW 218


>gi|4557845|ref|NP_001025.1| ribonucleoside-diphosphate reductase subunit M2 isoform 2 [Homo
           sapiens]
 gi|400979|sp|P31350|RIR2_HUMAN RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|36155|emb|CAA42181.1| small subunit ribonucleotide reductase [Homo sapiens]
 gi|251637|gb|AAA09577.1| ribonucleotide reductase R2 subunit [Homo sapiens]
 gi|12804875|gb|AAH01886.1| Ribonucleotide reductase M2 polypeptide [Homo sapiens]
 gi|14029165|gb|AAK51163.1| ribonucleotide reductase M2 subunit [Homo sapiens]
 gi|20988810|gb|AAH30154.1| Ribonucleotide reductase M2 polypeptide [Homo sapiens]
 gi|62702173|gb|AAX93099.1| unknown [Homo sapiens]
 gi|123981920|gb|ABM82789.1| ribonucleotide reductase M2 polypeptide [synthetic construct]
 gi|123996753|gb|ABM85978.1| ribonucleotide reductase M2 polypeptide [synthetic construct]
 gi|189053955|dbj|BAG36462.1| unnamed protein product [Homo sapiens]
 gi|261861600|dbj|BAI47322.1| ribonucleotide reductase M2 [synthetic construct]
          Length = 389

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 6/151 (3%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
            V+D+ +L        + P++Y   W+ Y  A  + W   EV +  D+  W+S   L  +
Sbjct: 66  GVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWES---LKPE 122

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +I +
Sbjct: 123 ERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDT 182

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQY 165
              D  E   LFN    +P +  KA+WAL++
Sbjct: 183 YIKDPKEREFLFNAIETMPCVKKKADWALRW 213


>gi|195401438|ref|XP_002059320.1| GJ18335 [Drosophila virilis]
 gi|194142326|gb|EDW58732.1| GJ18335 [Drosophila virilis]
          Length = 394

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 6/138 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W+ Y  A  + W   EV +  DL  W     LTD+ER  I   L FFA+S+
Sbjct: 87  IFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWAR---LTDNERHFISHVLAFFAASD 143

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +   E R +   Q   E VHS  +  +I +   D  +   LFN   
Sbjct: 144 GIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYIRDPHQRDYLFNAIE 203

Query: 151 EVPSITAKANWALQYTQT 168
            +P++  KA+WAL +  +
Sbjct: 204 TMPAVKRKADWALSWISS 221


>gi|145580571|pdb|2UW2|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase
           Subunit R2
          Length = 332

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 6/151 (3%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
            V+D+ +L        + P++Y   W+ Y  A  + W   EV +  D+  W+S   L  +
Sbjct: 9   GVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWES---LKPE 65

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +I +
Sbjct: 66  ERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDT 125

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQY 165
              D  E   LFN    +P +  KA+WAL++
Sbjct: 126 YIKDPKEREFLFNAIETMPCVKKKADWALRW 156


>gi|170664480|gb|ACB28637.1| small subunit ribonucleotide reductase [Myxoma virus]
 gi|170664652|gb|ACB28808.1| small subunit ribonucleotide reductase [recombinant virus
           6918VP60-T2]
          Length = 322

 Score = 69.3 bits (168), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 68/147 (46%), Gaps = 6/147 (4%)

Query: 19  VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
           ++D+ +L    D   + P++Y   W  Y  A  + W P EV +  DL  W+    LT DE
Sbjct: 1   MEDEPVLKESLDRYVVFPIQYNDIWNMYKKAVASFWTPEEVDISKDLKDWRV---LTPDE 57

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS- 137
           +  IK  L FFA+S+ +V  N+    Y  +   E R +   Q   E +HS  +  +I + 
Sbjct: 58  KYFIKHILAFFAASDGIVNENLAERFYVEVQIAEARCFYGFQIAMENIHSEMYSLLIDTY 117

Query: 138 -LGLDEGE-LFNMYREVPSITAKANWA 162
            + L E E LF     +  I  KA W 
Sbjct: 118 IINLQEKEKLFKAIETMDCIKQKAEWV 144


>gi|154340038|ref|XP_001565976.1| ribonucleoside-diphosphate reductase small chain [Leishmania
           braziliensis MHOM/BR/75/M2904]
 gi|134063294|emb|CAM45500.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 388

 Score = 69.3 bits (168), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 8/145 (5%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   W KY    +  W   E+ + +D+  W +   L D ER  IK  L FFA S+
Sbjct: 80  LFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWVA---LNDGERHFIKHVLAFFAGSD 136

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +  PE R +   Q   E +HS T+  ++ +   D  E   L +  +
Sbjct: 137 GIVVENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDSEEKLRLLHAIQ 196

Query: 151 EVPSITAKANWALQYTQTLSSPSFH 175
            +P I  KA WA+++    SS SF 
Sbjct: 197 TIPCIQKKAEWAVRWIG--SSASFQ 219


>gi|316971821|gb|EFV55552.1| ribonucleotide reductase R2 subunit [Trichinella spiralis]
          Length = 366

 Score = 69.3 bits (168), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 6/168 (3%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           +P++     ++  ++ +L +      LLPL+Y   W  Y  A  + W   EV ++ D   
Sbjct: 33  TPMEQDAAAIDNCEEPLLRSNPKRFVLLPLEYPDIWAMYKKAEASFWTVEEVDLRKDAND 92

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           W     L  DE+  I   L FFA+S+ +V  N+V    + +   E R +   Q   E VH
Sbjct: 93  WAK---LNKDEKHFISHVLAFFAASDGIVFENLVERFSQEIQVTEARFFYGFQIAIENVH 149

Query: 128 SHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSP 172
           S  +  +I +   D  E   LFN    +P +  KA+WAL++     SP
Sbjct: 150 SEMYSLLIDTYIRDPVERDFLFNAIETIPCVKKKADWALRWIGDRQSP 197


>gi|75076796|sp|Q4R7Q7|RIR2_MACFA RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|67969020|dbj|BAE00865.1| unnamed protein product [Macaca fascicularis]
          Length = 389

 Score = 69.3 bits (168), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 6/151 (3%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
            V+D+ +L        + P++Y   W+ Y  A  + W   EV +  D+  W+S   L  +
Sbjct: 66  GVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWES---LKPE 122

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +I +
Sbjct: 123 ERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDT 182

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQY 165
              D  E   LFN    +P +  KA+WAL++
Sbjct: 183 YIKDPKEREFLFNAIETMPCVEKKADWALRW 213


>gi|154337607|ref|XP_001565036.1| ribonucleoside-diphosphate reductase small chain [Leishmania
           braziliensis MHOM/BR/75/M2904]
 gi|134062075|emb|CAM45178.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 392

 Score = 69.3 bits (168), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 8/145 (5%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   W KY    +  W   E+ + +D+  W +   L D ER  IK  L FFA S+
Sbjct: 84  LFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWVA---LNDGERHFIKHVLAFFAGSD 140

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +  PE R +   Q   E +HS T+  ++ +   D  E   L +  +
Sbjct: 141 GIVVENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDSEEKLRLLHAIQ 200

Query: 151 EVPSITAKANWALQYTQTLSSPSFH 175
            +P I  KA WA+++    SS SF 
Sbjct: 201 TIPCIQKKAEWAVRWIG--SSASFQ 223


>gi|84998662|ref|XP_954052.1| ribonucleotide reductase R2 subunit or ribonucleoside-diphosphate
           reductase small chain [Theileria annulata]
 gi|65305050|emb|CAI73375.1| ribonucleotide reductase R2 subunit or ribonucleoside-diphosphate
           reductase small chain, putative [Theileria annulata]
          Length = 322

 Score = 69.3 bits (168), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 6/145 (4%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +LN   +   L P+ Y   WE Y  A  + W   E+    D   W   + L  DER 
Sbjct: 16  EEFILNRNPNRTCLFPIVYPDFWEWYKKAQASFWTAEEIDFSMDYNHW---HKLNKDERH 72

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I   L FFA+S+ +V  N+ L   R +  PE + +   Q   E +HS T+  +I +   
Sbjct: 73  FITNVLAFFAASDGIVLENLALKFLRDVKIPEAQSFYSFQIAVENIHSETYSLLIENYVK 132

Query: 141 DEGE---LFNMYREVPSITAKANWA 162
           DE E   LF     + ++  KANWA
Sbjct: 133 DEAEKRRLFMAIETIDAVKDKANWA 157


>gi|194690416|gb|ACF79292.1| unknown [Zea mays]
 gi|194704028|gb|ACF86098.1| unknown [Zea mays]
 gi|195619132|gb|ACG31396.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
 gi|223943167|gb|ACN25667.1| unknown [Zea mays]
          Length = 339

 Score = 69.3 bits (168), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 5/147 (3%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +L   SD   + P++Y   WE Y  A  + W   EV +  D   W +   L+ DER  I 
Sbjct: 17  LLAESSDRFSMFPIRYPQIWEFYKKAVASFWTAEEVDLSADARHWDA--ALSPDERHFIS 74

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL---GL 140
             L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  ++ +    G 
Sbjct: 75  HVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIRDGT 134

Query: 141 DEGELFNMYREVPSITAKANWALQYTQ 167
           ++  LF     VP++  KA+WA+++  
Sbjct: 135 EKDRLFRAIETVPAVRRKADWAMRWID 161


>gi|17551968|ref|NP_497821.1| RiboNucleotide Reductase family member (rnr-2) [Caenorhabditis
           elegans]
 gi|1172941|sp|P42170|RIR2_CAEEL RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|3873950|emb|CAA84688.1| C. elegans protein C03C10.3, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 381

 Score = 69.3 bits (168), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 69/148 (46%), Gaps = 6/148 (4%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           D+ ML    +   + PLK+   W  Y  A  + W   EV +  D+  W+  NG   DE+ 
Sbjct: 61  DEPMLQDLDNRFVIFPLKHHDIWNFYKKAVASFWTVEEVDLGKDMNDWEKMNG---DEQY 117

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I R L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  +I +   
Sbjct: 118 FISRILAFFAASDGIVNENLCERFSNEVQVSEARFFYGFQIAIENIHSEMYSKLIETYIR 177

Query: 141 DEGE---LFNMYREVPSITAKANWALQY 165
           DE E   LFN   E   I  KA+WAL++
Sbjct: 178 DETERNTLFNAVDEFEFIKKKADWALRW 205


>gi|322493026|emb|CBZ28311.1| ribonucleoside-diphosphate reductase small chain,putative
           [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 388

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 8/145 (5%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   W KY    +  W   E+ + +D+  W +   L D ER  IK  L FFA S+
Sbjct: 80  LFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWAA---LNDGERHFIKHVLAFFAGSD 136

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +  PE R +   Q   E +HS T+  ++ +   D  E   L +  +
Sbjct: 137 GIVVENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDSEEKLRLLHAIQ 196

Query: 151 EVPSITAKANWALQYTQTLSSPSFH 175
            +P I  KA WA+++    SS SF 
Sbjct: 197 TIPCIQRKAEWAVRWIG--SSASFQ 219


>gi|303258316|ref|ZP_07344319.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderiales
           bacterium 1_1_47]
 gi|302858762|gb|EFL81850.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderiales
           bacterium 1_1_47]
          Length = 328

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 3/130 (2%)

Query: 32  NQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFAS 91
           N   P  Y WA++ ++++   HW+ TEVPM +D+  W  KN LTD ER  + +   FF  
Sbjct: 11  NYYKPFSYPWAYDAFMASEQMHWLWTEVPMIEDIKDW--KNVLTDGERDFLTKVFRFFTQ 68

Query: 92  SESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYRE 151
            +  V++  V         PE R  L   A  EAVH   + ++I ++G+ E  ++N + +
Sbjct: 69  GDIDVSSAYVNTYLPFFPTPEIRMMLSSFAAREAVHIAAYSHLIETIGMPE-TVYNEFLQ 127

Query: 152 VPSITAKANW 161
             ++  K ++
Sbjct: 128 YEAMAEKHDF 137


>gi|297265423|ref|XP_001091447.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Macaca
           mulatta]
          Length = 704

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 6/151 (3%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
            V+D+ +L        + P++Y   W+ Y  A  + W   EV +  D+  W+S   L  +
Sbjct: 411 GVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWES---LKPE 467

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +I +
Sbjct: 468 ERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDT 527

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQY 165
              D  E   LFN    +P +  KA+WAL++
Sbjct: 528 YIKDPKEREFLFNAIETMPCVKKKADWALRW 558


>gi|330998673|ref|ZP_08322403.1| ribonucleoside-diphosphate reductase, beta subunit [Parasutterella
           excrementihominis YIT 11859]
 gi|329576534|gb|EGG58042.1| ribonucleoside-diphosphate reductase, beta subunit [Parasutterella
           excrementihominis YIT 11859]
          Length = 327

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 3/130 (2%)

Query: 32  NQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFAS 91
           N   P  Y WA++ ++++   HW+ TEVPM +D+  W  KN LTD ER  + +   FF  
Sbjct: 10  NYYKPFSYPWAYDAFMASEQMHWLWTEVPMIEDIKDW--KNVLTDGERDFLTKVFRFFTQ 67

Query: 92  SESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYRE 151
            +  V++  V         PE R  L   A  EAVH   + ++I ++G+ E  ++N + +
Sbjct: 68  GDIDVSSAYVNTYLPFFPTPEIRMMLSSFAAREAVHIAAYSHLIETIGMPE-TVYNEFLQ 126

Query: 152 VPSITAKANW 161
             ++  K ++
Sbjct: 127 YEAMAEKHDF 136


>gi|262263187|dbj|BAI48096.1| ribonucleotide reductase M2 [Sus scrofa]
          Length = 355

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 6/151 (3%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           +V+D+ +L        + P++Y   W+ Y  A  + W   EV +  D+  W++   L  +
Sbjct: 49  SVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWET---LKPE 105

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +I +
Sbjct: 106 ERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDT 165

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQY 165
              D  E   LFN    +P +  KA+WAL++
Sbjct: 166 YIKDSKEREFLFNAIETMPCVKKKADWALRW 196


>gi|157869457|ref|XP_001683280.1| ribonucleoside-diphosphate reductase small chain [Leishmania major
           strain Friedlin]
 gi|68224164|emb|CAJ04657.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania major strain Friedlin]
          Length = 392

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 8/145 (5%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   W KY    +  W   E+ + +D+  W +   L D ER  IK  L FFA S+
Sbjct: 84  LFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWAT---LNDGERHFIKHVLAFFAGSD 140

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +  PE R +   Q   E +HS T+  ++ +   D  E   L +  +
Sbjct: 141 GIVIENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDSEEKLRLLHAIQ 200

Query: 151 EVPSITAKANWALQYTQTLSSPSFH 175
            +P I  KA WA+++    SS SF 
Sbjct: 201 TIPCIQKKAEWAVRWIG--SSASFQ 223


>gi|301117384|ref|XP_002906420.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
           infestans T30-4]
 gi|262107769|gb|EEY65821.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
           infestans T30-4]
          Length = 379

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++    W+ Y  A  + W   E+ +  DL  W   + LTD+ER  IK  L FFA+S+
Sbjct: 72  LFPIQEHEVWQMYKKAEASFWTAEELDLVHDLKDW---SKLTDNERHFIKHVLAFFAASD 128

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL---GLDEGELFNMYR 150
            +V  N+ +     +  PE R +   Q   E +HS  +  +I +     +++  L     
Sbjct: 129 GIVNENLAMNFSNEVQVPEARCFYGFQIAIENIHSEVYSLLIDTYIKDAIEKDHLLRAIE 188

Query: 151 EVPSITAKANWALQY 165
            +P +T KA+WA+++
Sbjct: 189 TIPCVTKKAHWAIKW 203


>gi|2500209|sp|Q60561|RIR2_MESAU RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|49650|emb|CAA48232.1| ribonucleotide reductase [Mesocricetus auratus]
          Length = 386

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 6/151 (3%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           +V+D+ +L        + P++Y   W+ Y  A  + W   EV +  D+  W++   L  D
Sbjct: 67  SVEDEPLLRENPRRFVVFPIEYHDIWKMYKKAEASFWTAEEVDLSKDIQHWEA---LKPD 123

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +I +
Sbjct: 124 ERHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDT 183

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQY 165
              D  E   LFN    +P +  KA+WAL++
Sbjct: 184 YIKDSKEREYLFNAIETMPCVKKKADWALRW 214


>gi|302682638|ref|XP_003031000.1| hypothetical protein SCHCODRAFT_57055 [Schizophyllum commune H4-8]
 gi|300104692|gb|EFI96097.1| hypothetical protein SCHCODRAFT_57055 [Schizophyllum commune H4-8]
          Length = 362

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 70/162 (43%), Gaps = 17/162 (10%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   W  Y     + W   E+ +  DL  W+ +  + D+ER  I   L FFA+S+
Sbjct: 55  LFPIQYHEIWAMYKKEEASFWTAEEMDLSKDLHDWEER--MNDNERHFISHVLAFFAASD 112

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N++      +  PE R +   Q   E VHS T+  +I +   D  +   L N   
Sbjct: 113 GIVNENLLTRFCGEVKVPEARCFYGFQIMMENVHSETYSLLIDTYIRDPAQRTFLLNAVE 172

Query: 151 EVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
            +P +  KA WAL+            W   RRS    R + F
Sbjct: 173 TIPCVRKKAEWALR------------WIADRRSSFAIRLVAF 202


>gi|76630259|ref|XP_584910.2| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 1 [Bos
           taurus]
 gi|297480610|ref|XP_002691527.1| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 1 [Bos
           taurus]
 gi|296482361|gb|DAA24476.1| ribonucleotide reductase M2 polypeptide isoform 1 [Bos taurus]
          Length = 389

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 6/151 (3%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           +V+D+ +L        + P++Y   W+ Y  A  + W   EV +  D+  W++   L  +
Sbjct: 66  SVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEA---LKSE 122

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +I +
Sbjct: 123 ERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDT 182

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQY 165
              D  E   LFN    +P +  KA+WAL++
Sbjct: 183 YIKDSKEREFLFNAIETMPCVKKKADWALRW 213


>gi|217071966|gb|ACJ84343.1| unknown [Medicago truncatula]
          Length = 206

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 67/144 (46%), Gaps = 8/144 (5%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   WE Y  A  + W   EV +  D+  W +   L+D E+  I   L FFA+S+
Sbjct: 31  MFPVRYKQLWEMYKKAEASFWTAEEVDLSYDVQHWAT---LSDSEKHFISHVLAFFATSD 87

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +  PE R +   Q   E +HS  +  ++ +   D  E   LFN   
Sbjct: 88  GIVLENLAARFLNDVQIPEARAFYGFQIAIENIHSEMYSLLLETYIKDSREKHKLFNAIE 147

Query: 151 EVPSITAKANWALQYTQTLSSPSF 174
            +P +  KA WAL +    SS SF
Sbjct: 148 NLPCVARKAEWALSWIN--SSTSF 169


>gi|149728153|ref|XP_001502384.1| PREDICTED: similar to Ribonucleoside-diphosphate reductase subunit
           M2 (Ribonucleotide reductase small subunit)
           (Ribonucleotide reductase small chain) [Equus caballus]
          Length = 425

 Score = 68.9 bits (167), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 6/151 (3%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           +V+D+ +L        + P++Y   W+ Y  A  + W   EV +  D+  W++   L  +
Sbjct: 102 SVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEA---LKPE 158

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +I +
Sbjct: 159 ERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDT 218

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQY 165
              D  E   LFN    +P +  KA+WAL++
Sbjct: 219 YIKDSKEREFLFNAIETMPCVKKKADWALRW 249


>gi|1710399|sp|P50649|RIR2_PLAFG RecName: Full=Ribonucleoside-diphosphate reductase small subunit;
           AltName: Full=Ribonucleotide reductase R2 subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|349790|gb|AAA29754.1| ribonucleotide reductase R2 subunit [Plasmodium falciparum]
          Length = 322

 Score = 68.9 bits (167), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 6/153 (3%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           +R+LN  SD   L P+ Y   +  Y  A    W   E+    DL   K    L ++E+  
Sbjct: 2   RRILNKESDRFTLYPILYPDVFPFYKKAEACFWTAEEIDYSSDL---KDFEKLNENEKHF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+ ++  R +   E +++   Q   E +HS T+  +I +   D
Sbjct: 59  IKHVLAFFAASDGIVLENLAVSFLREVQITEAKKFYSFQIAVENIHSETYSLLIDNYIKD 118

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           E E   LF+    +P++  KA WA ++    +S
Sbjct: 119 EKERLNLFHAIENIPAVKNKALWAAKWINDTNS 151


>gi|226294144|gb|EEH49564.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides
           brasiliensis Pb18]
          Length = 325

 Score = 68.9 bits (167), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 64/132 (48%), Gaps = 5/132 (3%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           W+ Y  A  + W   EV +  DL  W   N L DDER  I   L FFA+S+ +V  N+V 
Sbjct: 12  WQMYKKAEASFWTAEEVDLSKDLHDWN--NRLNDDERYFISHVLAFFAASDGIVNENLVE 69

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKA 159
                +  PE R +   Q   E +HS T+  +I +   +  +   LF+    +P I  KA
Sbjct: 70  RFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEPKQRTYLFDAIDTIPCIRKKA 129

Query: 160 NWALQYTQTLSS 171
           +WA+++ +   S
Sbjct: 130 DWAIRWIEDKES 141


>gi|239502693|ref|ZP_04662003.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AB900]
          Length = 309

 Score = 68.9 bits (167), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 69/135 (51%), Gaps = 3/135 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P+K+ WA        NN W P  V M DD+A   S N L   +R M  + L F ++ + +
Sbjct: 5   PMKHTWAKGILDRMENNTWFPHVVNMADDVA---SYNRLNAADRFMFDKALAFLSNLDGI 61

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
             NNI   I +H+++PE    L RQA+EEA+H  ++  II ++ LD   ++  +     +
Sbjct: 62  QFNNINQNIAKHVTSPEVSMCLSRQAWEEALHVKSYATIIETVSLDPMSVYMTFERDGLL 121

Query: 156 TAKANWALQYTQTLS 170
             K  + L+ ++ L 
Sbjct: 122 AQKNQFILKQSRLLG 136


>gi|326797773|ref|YP_004315592.1| ribonucleoside-diphosphate reductase [Sphingobacterium sp. 21]
 gi|326548537|gb|ADZ76922.1| Ribonucleoside-diphosphate reductase [Sphingobacterium sp. 21]
          Length = 323

 Score = 68.6 bits (166), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 6/154 (3%)

Query: 20  DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER 79
           +++ +L    D   +LP+ Y   W+ Y     + W   E+ +  DL  W +   L D ER
Sbjct: 4   ENEVLLRENKDRFVILPINYPAIWDMYKKHEASFWTAEEIDLSGDLKDWAN---LNDGER 60

Query: 80  LMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
             I   L FFA+S+ +V  N+ +     +  PE R +   Q   E +HS T+  +I +  
Sbjct: 61  HFISHVLAFFAASDGIVNENLAINFMSEVQLPEARSFYGFQIAMENIHSETYALLIDTYV 120

Query: 140 LDEGE---LFNMYREVPSITAKANWALQYTQTLS 170
            D  E   LF+    V  +  KA WAL++ +  S
Sbjct: 121 KDPVEKDRLFHAIETVECVKKKAEWALRWIENGS 154


>gi|323453718|gb|EGB09589.1| hypothetical protein AURANDRAFT_60022 [Aureococcus anophagefferens]
          Length = 393

 Score = 68.6 bits (166), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 6/138 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+K    W  Y  A  + W   EV +  D   W+    L + ER  + R L FFA+S+
Sbjct: 84  LFPIKDAGLWAMYKRAEASFWTAEEVDLGQDKQHWEQ---LDEGERYFLSRVLAFFAASD 140

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYRE-- 151
            +V  N+V    + ++ PE R +   Q   E VH   +  ++ +   D GE   + R   
Sbjct: 141 GIVLENLVERFAQEVTLPEARFFYAFQGAIEGVHQEMYSLLLETYVEDPGEREALTRAHD 200

Query: 152 -VPSITAKANWALQYTQT 168
            +P + AKA+WA+++T +
Sbjct: 201 LMPCVKAKADWAMKWTAS 218


>gi|77748199|gb|AAI06683.1| MGC78958 protein [Xenopus laevis]
          Length = 406

 Score = 68.6 bits (166), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 6/157 (3%)

Query: 19  VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
           + D+ +L        +LP++Y   W+ Y  A  + W   EV +  DL  W++   L  +E
Sbjct: 84  IQDEPLLRDNPGRFVILPIEYHDIWQMYKKAEASFWTAEEVDLSKDLQHWET---LKPEE 140

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           R  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +I + 
Sbjct: 141 RYFISYVLAFFAASDGIVNENLVERFSQEVQVTEVRCFYGFQIAMENIHSEMYSLLIDTY 200

Query: 139 GLDEGE---LFNMYREVPSITAKANWALQYTQTLSSP 172
             D  E   LFN    +P +  KA W+L++     +P
Sbjct: 201 IKDPKEREFLFNAIETLPCVKKKAEWSLRWISDREAP 237


>gi|255551489|ref|XP_002516790.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
           communis]
 gi|223543878|gb|EEF45404.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
           communis]
          Length = 342

 Score = 68.6 bits (166), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 6/140 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   WE Y  A  + W   EV +  D+  W++   L+  E+  I   L FFA+S+
Sbjct: 32  MFPIRYKSLWEMYKKAEASFWTAEEVDLSQDVQQWET---LSVSEKHFISHVLAFFAASD 88

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +  PE R +   Q   E +HS  +  ++ +   D  E   LFN   
Sbjct: 89  GIVLENLAARFLNDIQVPEARAFYGFQIAMENIHSEMYSLLLETYIKDSREKNRLFNAIE 148

Query: 151 EVPSITAKANWALQYTQTLS 170
            +P +  KA WAL +  + S
Sbjct: 149 TIPCVARKAKWALDWIHSSS 168


>gi|328700093|ref|XP_001944536.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Acyrthosiphon pisum]
          Length = 361

 Score = 68.6 bits (166), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+ Y   W  Y     + W   EV ++ DL  W     LTDDER  I   L FFA+S+
Sbjct: 51  IFPIIYDDIWAMYKKQEASFWNVEEVNLKSDLEDWMK---LTDDERHFISHVLAFFAASD 107

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 108 GIVNENLVERFSQEVQVTEARCFYGFQIMMENIHSEMYSLLIDTYIQDPKEKDFLFNAIE 167

Query: 151 EVPSITAKANWALQY 165
            +P +  KA+WAL++
Sbjct: 168 TMPCVKKKADWALKW 182


>gi|311748425|ref|ZP_07722210.1| ribonucleoside-diphosphate reductase, beta subunit [Algoriphagus
           sp. PR1]
 gi|126576938|gb|EAZ81186.1| ribonucleoside-diphosphate reductase, beta subunit [Algoriphagus
           sp. PR1]
          Length = 326

 Score = 68.6 bits (166), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+++   WE Y  A  + W   E+ +  D+  WKS   L D ER  I   L FFA+S+
Sbjct: 16  LFPIQHADIWEYYKKAEASFWTAEEIDLGQDMVDWKS---LNDGERHFISHVLAFFAASD 72

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +   E + +   Q   E +HS T+  +I +   D  E   LFN   
Sbjct: 73  GIVNENLAEHFVAEVQYTEAKFFYGFQIAMENIHSETYSLLIDTYIKDPSERDKLFNAIE 132

Query: 151 EVPSITAKANWALQY 165
            +  +  KA+WAL++
Sbjct: 133 HIDCVKKKADWALRW 147


>gi|208434985|ref|YP_002266651.1| ribonucleoside diphosphate reductase, beta subunit [Helicobacter
           pylori G27]
 gi|208432914|gb|ACI27785.1| ribonucleoside diphosphate reductase, beta subunit [Helicobacter
           pylori G27]
          Length = 341

 Score = 68.6 bits (166), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 74/138 (53%), Gaps = 4/138 (2%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA   + +   N W   EV M DD    +    L+ +E++   R L      +SL 
Sbjct: 36  IKYQWADHLWKTMLANTWFAEEVSMNDDK---RDYLKLSAEEKIGYDRALAQLIFMDSLQ 92

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSIT 156
           ANN++  I   +++PE    L+RQA+EEA+HSH +  ++ S+  +  E+++M+R    + 
Sbjct: 93  ANNLIDNINPFITSPEINLCLVRQAYEEALHSHAYAVMVESISANTEEIYDMWRNDMQLK 152

Query: 157 AKANWALQ-YTQTLSSPS 173
           +K ++  Q Y +   +P+
Sbjct: 153 SKNDYIAQVYMELAKNPT 170


>gi|56555145|gb|AAV98100.1| RR2 protein [Shrimp white spot syndrome virus]
          Length = 328

 Score = 68.6 bits (166), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 8/157 (5%)

Query: 17  VNVDDKRMLNARSDVNQLL--PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           + VD  + L  R + N+ +  P+ +   WE Y       W   E+  + D   W+    L
Sbjct: 26  MQVDTSKHLLTRENPNRFVSRPIVHEDLWEMYKKEVACFWTLEEIDFERDPKDWEK---L 82

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           T DE+  I + L FFASS+ +V  N+   + +    PE R +   Q   E++H + +  +
Sbjct: 83  TQDEKDFILQILAFFASSDGIVIENLTTRLRQVAQIPEARSFFDFQVGMESIHGNVYGEL 142

Query: 135 ITSLGLDEGE---LFNMYREVPSITAKANWALQYTQT 168
           I  L  DE +   LFN  +  P+I  K  WA+ + Q+
Sbjct: 143 IDRLVPDEKDKAILFNAAQHFPAIKKKEQWAINWMQS 179


>gi|15612081|ref|NP_223733.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori J99]
 gi|11387046|sp|Q9ZKC3|RIR2_HELPJ RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|4155613|gb|AAD06604.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 BETA CHAIN [Helicobacter
           pylori J99]
 gi|307637755|gb|ADN80205.1| Ribonucleotide reductase of classIa beta subunit [Helicobacter
           pylori 908]
 gi|325996356|gb|ADZ51761.1| Ribonucleotide reductase of class Ia beta subunit [Helicobacter
           pylori 2018]
 gi|325997944|gb|ADZ50152.1| Ribonucleosidase diphosphate reductase beta subunit [Helicobacter
           pylori 2017]
          Length = 341

 Score = 68.6 bits (166), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 74/138 (53%), Gaps = 4/138 (2%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA   + +   N W   EV M DD    +    L+ +E++   R L      +SL 
Sbjct: 36  IKYQWADHLWKTMLANTWFAEEVSMNDDK---RDYLKLSAEEKIGYDRALAQLIFMDSLQ 92

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSIT 156
           ANN++  I   +++PE    L+RQA+EEA+HSH +  ++ S+  +  E+++M+R    + 
Sbjct: 93  ANNLIDNINPFITSPEINLCLVRQAYEEALHSHAYAVMVESISANTEEIYDMWRNDMQLK 152

Query: 157 AKANWALQ-YTQTLSSPS 173
           +K ++  Q Y +   +P+
Sbjct: 153 SKNDYIAQVYMELAKNPT 170


>gi|317014473|gb|ADU81909.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Gambia94/24]
          Length = 341

 Score = 68.6 bits (166), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 74/138 (53%), Gaps = 4/138 (2%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA   + +   N W   EV M DD    +    L+ +E++   R L      +SL 
Sbjct: 36  IKYQWADHLWKTMLANTWFAEEVSMNDDK---RDYLKLSAEEKIGYDRALAQLIFMDSLQ 92

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSIT 156
           ANN++  I   +++PE    L+RQA+EEA+HSH +  ++ S+  +  E+++M+R    + 
Sbjct: 93  ANNLIDNINPFITSPEINLCLVRQAYEEALHSHAYAVMVESISANTEEIYDMWRNDMQLK 152

Query: 157 AKANWALQ-YTQTLSSPS 173
           +K ++  Q Y +   +P+
Sbjct: 153 SKNDYIAQVYMELAKNPT 170


>gi|327261313|ref|XP_003215475.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           isoform 3 [Anolis carolinensis]
          Length = 391

 Score = 68.6 bits (166), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W+ Y  A  + W   EV +  DL  W+S   L  DE+  I   L FFA+S+
Sbjct: 84  IFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWES---LKPDEKYFISHILAFFAASD 140

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 141 GIVNENLVERFSQEIQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREYLFNAIE 200

Query: 151 EVPSITAKANWALQY 165
            +P +  KA+WA+++
Sbjct: 201 TLPCVKRKADWAMRW 215


>gi|210135249|ref|YP_002301688.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori P12]
 gi|210133217|gb|ACJ08208.1| ribonucleoside-diphosphate reductase 1 beta subunit [Helicobacter
           pylori P12]
          Length = 341

 Score = 68.6 bits (166), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 74/138 (53%), Gaps = 4/138 (2%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA   + +   N W   EV M DD    +    L+ +E++   R L      +SL 
Sbjct: 36  IKYQWADHLWKTMLANTWFAEEVSMNDDK---RDYLKLSAEEKIGYDRALAQLIFMDSLQ 92

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSIT 156
           ANN++  I   +++PE    L+RQA+EEA+HSH +  ++ S+  +  E+++M+R    + 
Sbjct: 93  ANNLIDNINPFITSPEINLCLVRQAYEEALHSHAYAVMVESISANTEEIYDMWRNDMQLK 152

Query: 157 AKANWALQ-YTQTLSSPS 173
           +K ++  Q Y +   +P+
Sbjct: 153 SKNDYIAQVYMELAKNPT 170


>gi|148232385|ref|NP_001085389.1| ribonucleotide reductase M2, gene 1 [Xenopus laevis]
 gi|48735122|gb|AAH72071.1| MGC78958 protein [Xenopus laevis]
          Length = 406

 Score = 68.6 bits (166), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 6/157 (3%)

Query: 19  VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
           + D+ +L        +LP++Y   W+ Y  A  + W   EV +  DL  W++   L  +E
Sbjct: 84  IQDEPLLRDNPGRFVILPIEYHDIWQMYKKAEASFWTAEEVDLSKDLQHWET---LKPEE 140

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           R  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +I + 
Sbjct: 141 RYFIAYVLAFFAASDGIVNENLVERFSQEVQVTEVRCFYGFQIAMENIHSEMYSLLIDTY 200

Query: 139 GLDEGE---LFNMYREVPSITAKANWALQYTQTLSSP 172
             D  E   LFN    +P +  KA W+L++     +P
Sbjct: 201 IKDPKEREFLFNAIETLPCVKKKAEWSLRWISDREAP 237


>gi|15644992|ref|NP_207162.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori 26695]
 gi|2500210|sp|P55983|RIR2_HELPY RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|2313466|gb|AAD07432.1| ribonucleoside diphosphate reductase, beta subunit (nrdB)
           [Helicobacter pylori 26695]
          Length = 341

 Score = 68.6 bits (166), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 74/138 (53%), Gaps = 4/138 (2%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA   + +   N W   EV M DD    +    L+ +E++   R L      +SL 
Sbjct: 36  IKYQWADHLWKTMLANTWFAEEVSMNDDK---RDYLKLSAEEKIGYDRALAQLIFMDSLQ 92

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSIT 156
           ANN++  I   +++PE    L+RQA+EEA+HSH +  ++ S+  +  E+++M+R    + 
Sbjct: 93  ANNLIDNINPFITSPEINLCLVRQAYEEALHSHAYAVMVESISANTEEIYDMWRNDMQLK 152

Query: 157 AKANWALQ-YTQTLSSPS 173
           +K ++  Q Y +   +P+
Sbjct: 153 SKNDYIAQVYMELAKNPT 170


>gi|260909050|gb|ACX54162.1| RR2 protein [Shrimp white spot syndrome virus]
 gi|260909052|gb|ACX54163.1| RR2 protein [Shrimp white spot syndrome virus]
 gi|260909054|gb|ACX54164.1| RR2 protein [Shrimp white spot syndrome virus]
 gi|260909056|gb|ACX54165.1| RR2 protein [Shrimp white spot syndrome virus]
          Length = 349

 Score = 68.6 bits (166), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 8/157 (5%)

Query: 17  VNVDDKRMLNARSDVNQLL--PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           + VD  + L  R + N+ +  P+ +   WE Y       W   E+  + D   W+    L
Sbjct: 35  MQVDTSKHLLTRENPNRFVSRPIVHEDLWEMYKKEVACFWTLEEIDFERDPKDWEK---L 91

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           T DE+  I + L FFASS+ +V  N+   + +    PE R +   Q   E++H + +  +
Sbjct: 92  TQDEKDFILQILAFFASSDGIVIENLTTRLRQVAQIPEARSFFDFQVGMESIHGNVYGEL 151

Query: 135 ITSLGLDEGE---LFNMYREVPSITAKANWALQYTQT 168
           I  L  DE +   LFN  +  P+I  K  WA+ + Q+
Sbjct: 152 IDRLVPDEKDKAILFNAAQHFPAIKKKEQWAINWMQS 188


>gi|323143005|ref|ZP_08077711.1| ribonucleoside-diphosphate reductase, beta subunit [Succinatimonas
           hippei YIT 12066]
 gi|322417199|gb|EFY07827.1| ribonucleoside-diphosphate reductase, beta subunit [Succinatimonas
           hippei YIT 12066]
          Length = 331

 Score = 68.6 bits (166), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 74/144 (51%), Gaps = 4/144 (2%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K  N+ +KR L  +S  +   P  Y WA+E ++ +   HW+ TEVPM +D+  WK +  L
Sbjct: 2   KVKNMTEKRNLLTQSR-DYYKPFVYPWAYEAFMQSEQMHWLWTEVPMVEDVKDWKMR--L 58

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            D+ER  + +   FF   +  V++  V         PE R  L   A  EAVH   + ++
Sbjct: 59  NDNERDFLTKVFRFFTQGDIDVSSAYVHTYLPAFPQPEIRMMLSSFAAREAVHIAAYSHL 118

Query: 135 ITSLGLDEGELFNMYREVPSITAK 158
           I ++G+ +  ++N + +  ++ AK
Sbjct: 119 IETIGMPDA-IYNEFLQYEAMAAK 141


>gi|313683656|ref|YP_004061394.1| ribonucleotide reductase [Sulfuricurvum kujiense DSM 16994]
 gi|313156516|gb|ADR35194.1| ribonucleotide reductase [Sulfuricurvum kujiense DSM 16994]
          Length = 339

 Score = 68.6 bits (166), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 85/158 (53%), Gaps = 5/158 (3%)

Query: 18  NVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           +V+D+++     + + +L  +KY WA+  +    NN W P EV M  D   +K    LT+
Sbjct: 14  HVNDRQIFGGNPTGIFELNNIKYQWAYNLWEMMLNNTWFPKEVDMTRDAVDYKY---LTE 70

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
            E+    + L      +SL  NN++  +  +++ PE    L+RQ+FEEA+HS ++  ++ 
Sbjct: 71  MEKTAYDKALSQLIFMDSLQTNNLMDNVNPYVTAPEINLILVRQSFEEALHSQSYAVMVD 130

Query: 137 SLGLDEGELFNMYREVPSITAKAN-WALQYTQTLSSPS 173
           S+  +  E+++++R+   +  K +  A +Y +  + PS
Sbjct: 131 SISQNSEEIYDLWRKDMMLKTKNDSIAARYDELANDPS 168


>gi|187607401|ref|NP_001119973.1| ribonucleotide reductase M2 B (TP53 inducible) [Xenopus (Silurana)
           tropicalis]
 gi|165971068|gb|AAI58191.1| LOC100144925 protein [Xenopus (Silurana) tropicalis]
          Length = 346

 Score = 68.2 bits (165), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 70/159 (44%), Gaps = 17/159 (10%)

Query: 21  DKRMLNARSDVNQ-----------LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           DK + N  SD  +           + P+ Y   W+ Y  A  + W   EV +  DL  W+
Sbjct: 15  DKNLTNGHSDEEEPFLRKNPQRFVIFPIHYPDIWKMYKKAQASFWTAEEVDLSKDLVHWE 74

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
               L  +ER  I   L FFA+S+ +V  N+V    + +  PE R +   Q   E VHS 
Sbjct: 75  K---LKPEERNFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSE 131

Query: 130 TFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
            +  +I +   D      LFN    +P +  KA WAL++
Sbjct: 132 MYSLLIETYIKDPRRREFLFNAIETMPCVRKKAQWALRW 170


>gi|298707394|emb|CBJ30029.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 380

 Score = 68.2 bits (165), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 63/136 (46%), Gaps = 6/136 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++    W+ Y  A    W   E+ +  D   W+   GLTDDER  +K  L FFA+S+
Sbjct: 73  LFPIQDNEVWQMYKKAEACFWTAEELDLAHDHKDWE---GLTDDERHFVKHVLAFFAASD 129

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 130 GIVNENLASNFSSEIQLSEARCFYGFQIAIENIHSEVYSLLIDTYVKDAAEKTHLFNAME 189

Query: 151 EVPSITAKANWALQYT 166
            VP +  KA WAL++ 
Sbjct: 190 TVPCVRRKARWALRWC 205


>gi|223996990|ref|XP_002288168.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220975276|gb|EED93604.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 335

 Score = 68.2 bits (165), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 6/138 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+K    W+ Y  A  + W   E+ + +DL  W+S   L+ +ER  +   L FFA+S+
Sbjct: 28  LFPIKEPEIWKMYKKAEASFWTAEEIDLAEDLKDWES---LSINERHFVSHVLAFFAASD 84

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +++ E R +   Q   E +HS T+  +I +   D  E   L N   
Sbjct: 85  GIVNENLTGNFSTEVTSAEARCFYGFQIAVENIHSETYSLLIDTYIKDAQEKDHLLNAIE 144

Query: 151 EVPSITAKANWALQYTQT 168
            VP +  KANWAL++   
Sbjct: 145 TVPCVQKKANWALRWCDA 162


>gi|195027582|ref|XP_001986661.1| GH20400 [Drosophila grimshawi]
 gi|193902661|gb|EDW01528.1| GH20400 [Drosophila grimshawi]
          Length = 393

 Score = 68.2 bits (165), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 6/138 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W+ Y  A  + W   EV +  D+  W     LTD+ER  I   L FFA+S+
Sbjct: 86  IFPIQYHDIWQMYKKAEASFWTVEEVDLSKDMTDWVR---LTDNERHFISHVLAFFAASD 142

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +   E R +   Q   E VHS  +  +I +   D  +   LFN   
Sbjct: 143 GIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYIRDPHQRDYLFNAIE 202

Query: 151 EVPSITAKANWALQYTQT 168
            +P++  KA+WAL +  +
Sbjct: 203 TMPAVKRKADWALSWISS 220


>gi|295670491|ref|XP_002795793.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides
           brasiliensis Pb01]
 gi|226284878|gb|EEH40444.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides
           brasiliensis Pb01]
          Length = 325

 Score = 68.2 bits (165), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 5/132 (3%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           W+ Y  A  + W   E+ +  DL  W   N L DDER  I   L FFA+S+ +V  N+V 
Sbjct: 12  WQMYKKAEASFWTAEEIDLSKDLHDWN--NRLNDDERYFISHVLAFFAASDGIVNENLVE 69

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKA 159
                +  PE R +   Q   E +HS T+  +I +   +  +   LF+    +P I  KA
Sbjct: 70  RFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEPKQRTYLFDAIDTIPCIRKKA 129

Query: 160 NWALQYTQTLSS 171
           +WA+++ +   S
Sbjct: 130 DWAIRWIEDKES 141


>gi|224129040|ref|XP_002328875.1| predicted protein [Populus trichocarpa]
 gi|222839305|gb|EEE77642.1| predicted protein [Populus trichocarpa]
          Length = 329

 Score = 68.2 bits (165), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 8/159 (5%)

Query: 19  VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
           + ++ +L    D   + P++Y   WE Y  A  + W   EV +  D+  W++   LT DE
Sbjct: 4   IPEEPLLAENPDRFCMFPIQYPSIWEMYKKAEASFWTAEEVDLSSDIRHWEN---LTPDE 60

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           +  I   L FFA+S+ +V  N+     + +   E R +   Q   E +HS  +  ++ + 
Sbjct: 61  KHFISHVLAFFAASDGIVLENLAGRFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120

Query: 139 GLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSF 174
             D  E   LF+    VP +  KA WAL++     S SF
Sbjct: 121 IKDSEEKNRLFHAIETVPCVAKKARWALRWID--GSESF 157


>gi|163801385|ref|ZP_02195284.1| ribonucleoside-diphosphate reductase 1, beta subunit [Vibrio sp.
           AND4]
 gi|159174874|gb|EDP59674.1| ribonucleoside-diphosphate reductase 1, beta subunit [Vibrio sp.
           AND4]
          Length = 310

 Score = 68.2 bits (165), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 6/138 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   W+ Y +     W   E+    DL        LT+ E+  I+  L FFA SE
Sbjct: 9   LFPIQYEEIWQAYKTHEAAFWTTEELDFAQDL---PDLVKLTEGEKHFIRHVLAFFAQSE 65

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            ++  N++   Y  +   E R +L  QAF E +H+ T+   + +   D  E   LFN   
Sbjct: 66  GMINENLLTRFYGEIEIAEARCFLALQAFNEVIHAETYALQLETYIPDVEERERLFNAIE 125

Query: 151 EVPSITAKANWALQYTQT 168
            VP++  KA W +++  +
Sbjct: 126 NVPTVQRKAQWVMKWISS 143


>gi|242095388|ref|XP_002438184.1| hypothetical protein SORBIDRAFT_10g009290 [Sorghum bicolor]
 gi|241916407|gb|EER89551.1| hypothetical protein SORBIDRAFT_10g009290 [Sorghum bicolor]
          Length = 339

 Score = 68.2 bits (165), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 5/150 (3%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L   SD   + P+++   WE Y  A  + W   EV +  D   W     L+ DER 
Sbjct: 14  EEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWD--EALSPDERH 71

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I   L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  ++ +   
Sbjct: 72  FISHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIR 131

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQ 167
           D+ E   LF     VP++  KA+WA+++  
Sbjct: 132 DDAEKDRLFRAIDTVPAVRRKADWAMRWID 161


>gi|17158292|ref|NP_477710.1| wsv188 [Shrimp white spot syndrome virus]
 gi|14189948|gb|AAK55515.1|AF267731_1 ribonucleotide reductase small subunit [shrimp white spot syndrome
           virus]
 gi|15021490|gb|AAK77767.1|AF369029_98 ORF98, putative ribonucleotide reductase small subunit (RR2)
           [shrimp white spot syndrome virus]
 gi|17016586|gb|AAL33192.1| wsv188 [shrimp white spot syndrome virus]
 gi|19481835|gb|AAL89111.1| WSSV243 [shrimp white spot syndrome virus]
          Length = 413

 Score = 68.2 bits (165), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 8/157 (5%)

Query: 17  VNVDDKRMLNARSDVNQLL--PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           + VD  + L  R + N+ +  P+ +   WE Y       W   E+  + D   W+    L
Sbjct: 50  MQVDTSKHLLTRENPNRFVSRPIVHEDLWEMYKKEVACFWTLEEIDFERDPKDWEK---L 106

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           T DE+  I + L FFASS+ +V  N+   + +    PE R +   Q   E++H + +  +
Sbjct: 107 TQDEKDFILQILAFFASSDGIVIENLTTRLRQVAQIPEARSFFDFQVGMESIHGNVYGEL 166

Query: 135 ITSLGLDEGE---LFNMYREVPSITAKANWALQYTQT 168
           I  L  DE +   LFN  +  P+I  K  WA+ + Q+
Sbjct: 167 IDRLVPDEKDKAILFNAAQHFPAIKKKEQWAINWMQS 203


>gi|268575178|ref|XP_002642568.1| C. briggsae CBR-RNR-2 protein [Caenorhabditis briggsae]
 gi|187023588|emb|CAP37241.1| CBR-RNR-2 protein [Caenorhabditis briggsae AF16]
          Length = 365

 Score = 68.2 bits (165), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + PL++   W+ Y  A  + W   EV +  D+  W+  NG   DE+  I R L FFA+S+
Sbjct: 58  IFPLRHHEIWQFYKKAVASFWTVEEVDLGKDMNDWEKMNG---DEQYFISRVLAFFAASD 114

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +   E R +   Q   E +HS  +  +I +   DE E   LFN   
Sbjct: 115 GIVNENLCERFSNEVKVSEARFFYGFQIAIENIHSEMYSKLIETYIRDEKERMKLFNAIF 174

Query: 151 EVPSITAKANWALQY 165
           E   I  KA+WAL++
Sbjct: 175 EFEFIKKKADWALRW 189


>gi|56118690|ref|NP_001007890.1| ribonucleotide reductase M2, gene 2 [Xenopus (Silurana) tropicalis]
 gi|51258920|gb|AAH80161.1| ribonucleotide reductase M2 polypeptide [Xenopus (Silurana)
           tropicalis]
          Length = 386

 Score = 68.2 bits (165), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 6/154 (3%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + D+ +L        + P++Y   W+ Y  A  + W   EV +  DL  W+S   L
Sbjct: 60  KDPRIQDEPLLKDNPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLRHWES---L 116

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
             +E+  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +
Sbjct: 117 KAEEKYFISHVLAFFAASDGIVNENLVERFSKEVQVTEARCFYGFQIAMENIHSEMYSLL 176

Query: 135 ITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
           I +   D  E   LFN    +P +  KA+WAL++
Sbjct: 177 IDTYIKDPKEREYLFNAIETLPCVKKKADWALRW 210


>gi|3914644|sp|O46310|RIR2_LEIAM RecName: Full=Ribonucleoside-diphosphate reductase small subunit;
           AltName: Full=Ribonucleotide reductase M2 subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|2828563|gb|AAC08302.1| ribonucleotide reductase M2 subunit [Leishmania amazonensis]
          Length = 345

 Score = 67.8 bits (164), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 17/181 (9%)

Query: 7   LSPIQAGEKRVNVDD-KRMLNARSDVNQ--------LLPLKYGWAWEKYLSACNNHWMPT 57
           + P+ AG + +  D   +  NA  +  Q        L P++Y   W KY    +  W   
Sbjct: 1   MKPVAAGAEVLPADKVAQGTNAEEEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVE 60

Query: 58  EVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYL 117
           E+ + +D+  W +   L D ER  IK  L FFA S+ +V  N+       +  PE R + 
Sbjct: 61  EIDLGNDMKDWAT---LNDGERHFIKHVLAFFAGSDGIVIENLAQRFMSDVKVPEARAFY 117

Query: 118 LRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSF 174
             Q   E +HS T+  ++ +   D  E   L +  + +P I  KA W +++    SS SF
Sbjct: 118 GFQLMMENIHSETYSVLLDTYITDSEEKLRLLHAIQTIPCIQKKAEWPVRWIG--SSASF 175

Query: 175 H 175
            
Sbjct: 176 Q 176


>gi|71043760|ref|NP_001020911.1| ribonucleoside-diphosphate reductase subunit M2 [Rattus norvegicus]
 gi|77416595|sp|Q4KLN6|RIR2_RAT RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|68533806|gb|AAH99082.1| Ribonucleotide reductase M2 [Rattus norvegicus]
 gi|149051013|gb|EDM03186.1| rCG61374 [Rattus norvegicus]
          Length = 390

 Score = 67.8 bits (164), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W+ Y  A  + W   EV +  D+  W++   L  DER  I   L FFA+S+
Sbjct: 83  VFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEA---LKPDERHFISHVLAFFAASD 139

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 140 GIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREYLFNAIE 199

Query: 151 EVPSITAKANWALQY 165
            +P +  KA+WAL++
Sbjct: 200 TMPCVKKKADWALRW 214


>gi|293343290|ref|XP_002725449.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like [Rattus
           norvegicus]
 gi|293355176|ref|XP_002728627.1| PREDICTED: ribonucleotide reductase M2 polypeptide [Rattus
           norvegicus]
          Length = 390

 Score = 67.8 bits (164), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W+ Y  A  + W   EV +  D+  W++   L  DER  I   L FFA+S+
Sbjct: 83  VFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEA---LKPDERHFISHVLAFFAASD 139

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 140 GIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREYLFNAIE 199

Query: 151 EVPSITAKANWALQY 165
            +P +  KA+WAL++
Sbjct: 200 TMPCVKKKADWALRW 214


>gi|225451453|ref|XP_002269951.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|147804660|emb|CAN64484.1| hypothetical protein VITISV_012640 [Vitis vinifera]
          Length = 329

 Score = 67.8 bits (164), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 6/151 (3%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           ++ ++ +L    D   + P++Y   WE Y  A  + W   EV +  D   W++   LT D
Sbjct: 3   SIPEEPLLAPNPDRFCMFPIQYPEVWEMYKKAEASFWTAEEVDLSQDQRQWEN---LTSD 59

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+  I   L FFA+S+ +V  N+     + +   E R +   Q   E +HS  +  ++ S
Sbjct: 60  EKHFISHILAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLES 119

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQY 165
              D  E   LF+    +P +  KA WAL++
Sbjct: 120 YIKDPKEKNRLFHAIDTIPCVAKKAQWALRW 150


>gi|82538850|ref|XP_723858.1| ribonucleotide reductase small chain [Plasmodium yoelii yoelii str.
           17XNL]
 gi|145580416|pdb|2P1I|A Chain A, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580417|pdb|2P1I|B Chain B, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580418|pdb|2P1I|C Chain C, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580419|pdb|2P1I|D Chain D, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580420|pdb|2P1I|E Chain E, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580421|pdb|2P1I|F Chain F, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580422|pdb|2P1I|G Chain G, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580423|pdb|2P1I|H Chain H, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|23478298|gb|EAA15423.1| Ribonucleotide reductase, small chain [Plasmodium yoelii yoelii]
          Length = 349

 Score = 67.8 bits (164), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 6/154 (3%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++++LN  S+   L P+ Y   W  Y  A  + W   E+ +  DL   K    L  +E+ 
Sbjct: 30  NEKILNKESNRFTLHPIMYPEVWNFYKKAEASFWTAEEIDLSSDL---KDFEKLNVNEKH 86

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            IK  L FFA+S+ +V  N+     R +   E +++   Q   E +HS T+  +I +   
Sbjct: 87  FIKHVLAFFAASDGIVLENLASKFLREVEIIEAKKFYSFQIAVENIHSETYSLLIDNYIK 146

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           DE E   LF+    +P+I  KA WA ++    +S
Sbjct: 147 DEKERLNLFHAIENIPAIKNKALWAAKWINDTNS 180


>gi|218197485|gb|EEC79912.1| hypothetical protein OsI_21460 [Oryza sativa Indica Group]
          Length = 345

 Score = 67.8 bits (164), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 5/150 (3%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L   SD   + P++Y   WE Y  A  + W   EV +  D   W +   L+ DER 
Sbjct: 20  EEPLLAESSDRFSMFPIRYPQIWEFYKKAVASFWTAEEVDLSADARHWDA--ALSPDERH 77

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL-- 138
            +   L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  ++ +   
Sbjct: 78  FVSHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIR 137

Query: 139 -GLDEGELFNMYREVPSITAKANWALQYTQ 167
            G ++  LF     VP++  KA+WA+++  
Sbjct: 138 DGAEKDRLFRAIDTVPAVRRKADWAMRWID 167


>gi|12085003|ref|NP_073405.1| 20L protein [Yaba-like disease virus]
 gi|56404692|sp|Q9DHU2|RIR2_YLDV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|12056179|emb|CAC21258.1| 20L protein [Yaba-like disease virus]
          Length = 325

 Score = 67.8 bits (164), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 6/138 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+ Y   W+ Y  A  + W   EV +  D + W     L+D+E+  IK  L FFA+S+
Sbjct: 18  VFPIVYEDIWKMYKKAVASFWTVEEVDLSKDFSDWLK---LSDNEKNFIKHILAFFAASD 74

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+    Y  +   E R +   Q   E +HS  +  +I +  LD  E   LFN   
Sbjct: 75  GIVNENLAERFYSEVQISEARCFYGFQIAMENIHSEMYSLLIDTYILDSKEKNYLFNAIE 134

Query: 151 EVPSITAKANWALQYTQT 168
            +  +  KANWA ++ ++
Sbjct: 135 NMNCVKQKANWAKKWIES 152


>gi|242076364|ref|XP_002448118.1| hypothetical protein SORBIDRAFT_06g021460 [Sorghum bicolor]
 gi|241939301|gb|EES12446.1| hypothetical protein SORBIDRAFT_06g021460 [Sorghum bicolor]
          Length = 339

 Score = 67.8 bits (164), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 5/150 (3%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L   SD   + P+++   WE Y  A  + W   EV +  D   W +   L+ DER 
Sbjct: 14  EEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSADARHWDA--ALSPDERH 71

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL-- 138
            I   L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  ++ +   
Sbjct: 72  FISHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIR 131

Query: 139 -GLDEGELFNMYREVPSITAKANWALQYTQ 167
            G ++  LF     VP++  KA+WA+++  
Sbjct: 132 DGAEKDRLFRAIETVPAVRRKADWAMRWID 161


>gi|195172750|ref|XP_002027159.1| GL20023 [Drosophila persimilis]
 gi|198459455|ref|XP_001361381.2| GA21447 [Drosophila pseudoobscura pseudoobscura]
 gi|194112972|gb|EDW35015.1| GL20023 [Drosophila persimilis]
 gi|198136695|gb|EAL25959.2| GA21447 [Drosophila pseudoobscura pseudoobscura]
          Length = 391

 Score = 67.8 bits (164), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 6/141 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W+ Y  A  + W   EV +  D   W     LTD+ER  I   L FFA+S+
Sbjct: 84  IFPIQYHDIWQMYKKAEASFWTVEEVDLSKDATDWAR---LTDNERYFISHVLAFFAASD 140

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +   E R +   Q   E VHS  +  +I +   +  E   LFN   
Sbjct: 141 GIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYIREPQERDYLFNAIE 200

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +P++  KA+WA+ +  + S+
Sbjct: 201 TMPAVKRKADWAMSWISSKSA 221


>gi|73979721|ref|XP_540076.2| PREDICTED: similar to Ribonucleoside-diphosphate reductase M2 chain
           (Ribonucleotide reductase small chain) isoform 1 [Canis
           familiaris]
          Length = 394

 Score = 67.8 bits (164), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W+ Y  A  + W   EV +  D+  W+S   L  +ER  I   L FFA+S+
Sbjct: 87  IFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWES---LKPEERYFISHVLAFFAASD 143

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 144 GIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREFLFNAIE 203

Query: 151 EVPSITAKANWALQY 165
            +P +  KA+WAL++
Sbjct: 204 TMPCVKKKADWALRW 218


>gi|68304258|ref|YP_249726.1| RR2 [Chrysodeixis chalcites nucleopolyhedrovirus]
 gi|67973087|gb|AAY84053.1| RR2 [Chrysodeixis chalcites nucleopolyhedrovirus]
          Length = 318

 Score = 67.8 bits (164), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 5/141 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           LLP+     W+ Y  A + HW   E+ M  D   W  K  L D ER  +K  L FFA+++
Sbjct: 9   LLPIVNEDLWQSYKKAVDCHWKVEEIDMSKDFDDWNKK--LNDKERFFLKHVLAFFAAAD 66

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  NI+  +   +   E   +  +Q F E VH+  +  ++     D  E   + N   
Sbjct: 67  VIVNTNIIEHMQSAVPELEASFFYAQQTFIECVHTEMYNILVVEYIKDPQECDRILNAIE 126

Query: 151 EVPSITAKANWALQYTQTLSS 171
            + S+  KA WA ++ +  S+
Sbjct: 127 HIDSVKQKAAWAQKWIENQSA 147


>gi|156847978|ref|XP_001646872.1| hypothetical protein Kpol_2002p85 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117553|gb|EDO19014.1| hypothetical protein Kpol_2002p85 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 400

 Score = 67.8 bits (164), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 5/159 (3%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           +Q  E +    ++ +L A  +   L P++Y   +E Y  A  + W   E+ +  DL  W 
Sbjct: 63  VQRHELKEKETEEPLLVADPNRKILFPIQYPDIYEAYKRAEASFWTAEEIDLSKDLHDWN 122

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
             N + ++ER  I R L FFA+S+ +V  N+           E + +   Q   E +HS 
Sbjct: 123 --NRMNENERFFISRVLAFFAASDGIVNENLTENFSVEAQILEAKCFYGFQIMIENIHSE 180

Query: 130 TFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
           T+  +I +   D  E   LFN    +P I  KA WAL++
Sbjct: 181 TYSLLIDTYIKDPKESQYLFNAIETIPQIKEKAEWALRW 219


>gi|241166485|ref|XP_002409876.1| ribonucleotide reductase, beta subunit, putative [Ixodes
           scapularis]
 gi|215494664|gb|EEC04305.1| ribonucleotide reductase, beta subunit, putative [Ixodes
           scapularis]
          Length = 376

 Score = 67.8 bits (164), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 65/141 (46%), Gaps = 6/141 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+ Y   W  Y  A  + W   EV +  DL  W   +GL  +ER  I   L FFA+S+
Sbjct: 69  MFPIVYEDIWRMYKKAEASFWTVEEVDLGKDLPHW---DGLKPEERHFISHILAFFAASD 125

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +   E R +   Q   E VHS  +  +I +   D  E   LFN   
Sbjct: 126 GIVNENLVERFSQEVQVTEARCFYGFQMAIENVHSEMYSLLIDTYIKDPSERDRLFNAVE 185

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +P I  KA+WAL +    S+
Sbjct: 186 TMPCIKRKADWALNWISNRSA 206


>gi|18640102|ref|NP_570176.1| SPV016 ribonucleotide reductase, small subunit [Swinepox virus]
 gi|18448509|gb|AAL69755.1| SPV016 ribonucleotide reductase, small subunit [Swinepox virus]
          Length = 320

 Score = 67.8 bits (164), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 62/132 (46%), Gaps = 6/132 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+KY   W+ Y  +  + W   EV +  DL  W   + LT DE+  IK  L FFASS+
Sbjct: 14  IFPIKYHDIWKMYKQSVASFWTVEEVDLSKDLDDW---DKLTKDEKYFIKHILAFFASSD 70

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+    Y  +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 71  GIVNENLAERFYVDVQCSEARCFYGFQIAMENIHSEMYSLLIDTYVRDNIEKMHLFNAIE 130

Query: 151 EVPSITAKANWA 162
            +  +  KA+WA
Sbjct: 131 TMECVKKKADWA 142


>gi|9634266|ref|NP_037805.1| ORF45 ribonucleotide reductase small subunit (rr2) [Spodoptera
           exigua MNPV]
 gi|6960505|gb|AAF33575.1|AF169823_45 ORF45 ribonucleotide reductase small subunit (rr2) [Spodoptera
           exigua MNPV]
          Length = 313

 Score = 67.8 bits (164), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 71/135 (52%), Gaps = 5/135 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+++   W  Y  A +  W   EV +  D   +  K  LTD+ER  I++ L FFA+++
Sbjct: 8   LFPIQHIDLWASYKQALDCMWKVEEVDLSKDYDDFTQK--LTDNERNFIEKILAFFAAAD 65

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
           S+V  NI+  + R +   E + +  +Q   + +H+  +  +I +L  DE +   L N + 
Sbjct: 66  SIVNINIIEHMQRTVPELEAQYFYNQQVLIQCIHTEMYNLLIHALIKDEKKQEMLLNGFE 125

Query: 151 EVPSITAKANWALQY 165
            +P +  KA WA++Y
Sbjct: 126 NMPCVRRKAEWAMKY 140


>gi|417659|sp|P32209|RIR2_SWPVK RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|347472|gb|AAC37857.1| ribonucleotide reductase [Swinepox virus]
          Length = 274

 Score = 67.8 bits (164), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 6/138 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+KY   W+ Y  +  + W   EV +  DL  W   + LT DE+  IK  L FFASS+
Sbjct: 14  IFPIKYHDIWKMYKQSVASFWTVEEVDLSKDLDDW---DKLTKDEKYFIKHILAFFASSD 70

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+    Y  +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 71  GIVNENLAERFYVDVQCSEARCFYGFQIAMENIHSEMYSLLIDTYVRDNIEKMHLFNAIE 130

Query: 151 EVPSITAKANWALQYTQT 168
            +  +  KA+WA ++  +
Sbjct: 131 TMECVKKKADWARKWISS 148


>gi|308485547|ref|XP_003104972.1| hypothetical protein CRE_24501 [Caenorhabditis remanei]
 gi|308257293|gb|EFP01246.1| hypothetical protein CRE_24501 [Caenorhabditis remanei]
          Length = 323

 Score = 67.8 bits (164), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 6/145 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+++   W  Y  A  + W   EV +  D+A W+    L+ DE+  I   L FFA+S+
Sbjct: 16  IYPIEHHDIWSFYKKALASFWTTEEVDVGKDMADWER---LSADEKKFISTVLAFFAASD 72

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +   E R +   Q   E +HS T+  +I +   DE E   LF+  +
Sbjct: 73  GIVVENLCSRFANEVKIVEARFFYGFQIAVENIHSETYAKLIETYIKDERERLVLFDAIK 132

Query: 151 EVPSITAKANWALQYTQTLSSPSFH 175
               I  KA+WAL++   ++SP  H
Sbjct: 133 NFEFIKKKADWALRWISDMTSPFAH 157


>gi|308809930|ref|XP_003082274.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
           tauri]
 gi|116060742|emb|CAL57220.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
           tauri]
          Length = 382

 Score = 67.8 bits (164), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 6/141 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+K+   WE Y  A  + W   EV +  D   W++   L ++E+  +   L FFASS+
Sbjct: 75  LFPIKHPRVWEMYKKAEASFWTAEEVDLTYDYKDWQT---LNENEKHFVSHVLAFFASSD 131

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD---EGELFNMYR 150
            +V  N+       +  PE R +   Q   E +HS  +  ++ +   D   + ELF    
Sbjct: 132 GIVLENLCSRFMSDVQLPEARSFYGFQLAIENIHSEMYSLLLDTYIKDPKKKSELFRAIH 191

Query: 151 EVPSITAKANWALQYTQTLSS 171
            VP++  KA+WAL +  + +S
Sbjct: 192 TVPTVAMKADWALHWIGSDAS 212


>gi|73979723|ref|XP_856346.1| PREDICTED: similar to Ribonucleoside-diphosphate reductase M2 chain
           (Ribonucleotide reductase small chain) isoform 3 [Canis
           familiaris]
          Length = 381

 Score = 67.8 bits (164), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W+ Y  A  + W   EV +  D+  W+S   L  +ER  I   L FFA+S+
Sbjct: 87  IFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWES---LKPEERYFISHVLAFFAASD 143

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 144 GIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREFLFNAIE 203

Query: 151 EVPSITAKANWALQY 165
            +P +  KA+WAL++
Sbjct: 204 TMPCVKKKADWALRW 218


>gi|331245491|ref|XP_003335382.1| ribonucleoside-diphosphate reductase subunit M2 [Puccinia graminis
           f. sp. tritici CRL 75-36-700-3]
 gi|309314372|gb|EFP90963.1| ribonucleoside-diphosphate reductase subunit M2 [Puccinia graminis
           f. sp. tritici CRL 75-36-700-3]
          Length = 380

 Score = 67.8 bits (164), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 5/135 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W  Y  A  + W   E+ +  D+  W +K  L  DE+  IK  L FFA+S+
Sbjct: 60  LFPIKYHEIWASYKRAEASFWTAEEIDLSKDMHDWDNK--LNADEKHFIKHVLAFFAASD 117

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N++      +   E R +   Q   E +HS  +  +I +   +  E   LF+   
Sbjct: 118 GIVNENLIERFSGEVQVAEARCFYGFQIMMENIHSEVYSLLIDTYVREPTERAHLFDAID 177

Query: 151 EVPSITAKANWALQY 165
            +P I  KA+WAL +
Sbjct: 178 TIPCIRKKADWALTW 192


>gi|308490981|ref|XP_003107682.1| CRE-RNR-2 protein [Caenorhabditis remanei]
 gi|308250551|gb|EFO94503.1| CRE-RNR-2 protein [Caenorhabditis remanei]
          Length = 377

 Score = 67.8 bits (164), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + PL++   W+ Y  A  + W   EV +  D+  W+  NG   DE+  I R L FFA+S+
Sbjct: 70  IFPLRHHEIWQFYKKAVASFWTVEEVDLGKDMNDWEKMNG---DEQYFISRVLAFFAASD 126

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +   E R +   Q   E +HS  +  +I +   DE E   LFN   
Sbjct: 127 GIVNENLCERFSNEVKVSEARFFYGFQIAIENIHSEMYSKLIETYIRDEKERLTLFNAIF 186

Query: 151 EVPSITAKANWALQY 165
           E   I  KA+WA+++
Sbjct: 187 EFEFIKKKADWAMKW 201


>gi|157939640|ref|YP_001497012.1| ribonucleotide reductase [Tanapox virus]
 gi|146746356|gb|ABQ43492.1| ribonucleotide reductase [Tanapox virus]
 gi|146746512|gb|ABQ43647.1| ribonucleotide reductase [Tanapox virus]
          Length = 325

 Score = 67.8 bits (164), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 6/138 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+ Y   W+ Y  A  + W   EV +  D + W     L+D+E+  IK  L FFA+S+
Sbjct: 18  VFPIVYEDIWKMYKKAVASFWTVEEVDLSKDFSDWLK---LSDNEKNFIKHILAFFAASD 74

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+    Y  +   E R +   Q   E +HS  +  +I +  LD  E   LFN   
Sbjct: 75  GIVNENLAERFYSEVQISEARCFYGFQIAMENIHSEMYSLLIDTYILDSKEKNYLFNAIE 134

Query: 151 EVPSITAKANWALQYTQT 168
            +  +  KANWA ++ ++
Sbjct: 135 NMNCVKQKANWAKKWIES 152


>gi|70936723|ref|XP_739266.1| ribonucleotide reductase small subunit [Plasmodium chabaudi
           chabaudi]
 gi|56516136|emb|CAH80811.1| ribonucleotide reductase small subunit, putative [Plasmodium
           chabaudi chabaudi]
          Length = 349

 Score = 67.4 bits (163), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 6/154 (3%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++++LN  S    L P+ Y   W  Y  A  + W   E+ +  DL   K    L  +E+ 
Sbjct: 30  NEKILNKESSRFTLHPIMYPEVWNFYKKAEASFWTAEEIDLSSDL---KDFEKLNVNEKH 86

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            IK  L FFA+S+ +V  N+     R +   E +++   Q   E +HS T+  +I +   
Sbjct: 87  FIKHVLAFFAASDGIVLENLASKFLREVQIIEAKKFYAFQIAVENIHSETYSLLIDNYIR 146

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           DE E   LF+    +P+I  KA WA ++    +S
Sbjct: 147 DEKERLNLFHAIENIPAIKNKALWAAKWINDTNS 180


>gi|73852496|ref|YP_293780.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi
           virus 86]
 gi|72415212|emb|CAI65449.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi
           virus 86]
          Length = 325

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+ +   +E+Y  A  + W  +E+ +  D   W     LT++E+  IK  L FFA+++
Sbjct: 15  LFPIVHEDIYEEYKKAEASLWGVSEIDISTDKTDWPK---LTENEQHFIKYILAFFATAD 71

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +  PE R +   Q   E VH+ T+  ++ SL  D+ E   LF   R
Sbjct: 72  GIVFENLVTNFASEIQYPEARCFYGVQMMIENVHAETYSMMLQSLVEDKDEQRNLFRAIR 131

Query: 151 EVPSITAKANWALQY 165
            + SI  KA+WAL++
Sbjct: 132 TIQSIKNKADWALKW 146


>gi|118089009|ref|XP_001231545.1| PREDICTED: similar to small subunit ribonucleotide reductase
           isoform 1 [Gallus gallus]
          Length = 392

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 9/164 (5%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
           T L P Q        +++ +L        + P++Y   W+ Y  A  + W   EV +  D
Sbjct: 59  TALCPPQVAR---GAEEEPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKD 115

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           L  W+S   L  +E+  I   L FFA+S+ +V  N+V    + +   E R +   Q   E
Sbjct: 116 LQHWES---LKPEEKYFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAME 172

Query: 125 AVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
            +HS  +  +I +   D  E   LFN    +P +  KA+WA+++
Sbjct: 173 NIHSEMYSLLIDTYIKDSKEREFLFNAIETLPCVKKKADWAIRW 216


>gi|1710401|sp|P49730|RIR2_TOBAC RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleoside-diphosphate reductase R2
           subunit; AltName: Full=Ribonucleotide reductase small
           subunit
 gi|1044912|emb|CAA63194.1| ribonucleotide reductase R2 [Nicotiana tabacum]
          Length = 329

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 6/150 (4%)

Query: 19  VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
           + ++ +L +  D   + P++Y   WE Y  A  + W   EV +  D   W++   LT  E
Sbjct: 4   IPEEPLLASSPDRFCMFPIQYPQIWEMYKKALASFWTAEEVDLSSDTRHWET---LTPGE 60

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           R  I   L FFA+S+ +V  N+     + +   E R +   Q   E +HS  +  ++ S 
Sbjct: 61  RHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLESY 120

Query: 139 GLDEGELFNMYREV---PSITAKANWALQY 165
             D  E   ++R V   P +  KA WAL++
Sbjct: 121 IKDSDEKSRLFRAVETNPCVEKKAKWALRW 150


>gi|89268988|emb|CAJ81953.1| ribonucleotide reductase m2 polypeptide [Xenopus (Silurana)
           tropicalis]
 gi|89269815|emb|CAJ81580.1| ribonucleotide reductase m2 polypeptide [Xenopus (Silurana)
           tropicalis]
          Length = 386

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 6/154 (3%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + D+ +L        + P++Y   W+ Y  A  + W   EV +  DL  W+S   L
Sbjct: 60  KDPRIQDEPLLKDNPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLRHWES---L 116

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
             +E+  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +
Sbjct: 117 KAEEKYFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLL 176

Query: 135 ITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
           I +   D  E   LFN    +P +  KA+WAL++
Sbjct: 177 IDTYIKDPKEREYLFNAIETLPCVKKKADWALRW 210


>gi|4894211|gb|AAD32302.1| ribonucleotide reductase small subunit [Glycine max]
          Length = 339

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 8/165 (4%)

Query: 13  GEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
           G  +   + + +L  +S    + P++Y   WE Y  A  + W   EV +  D+  W++  
Sbjct: 8   GVDKARDEQEPILMEQSQRFCMFPIRYKQIWEMYKKAEASFWTAEEVDLSYDVQHWET-- 65

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
            L+  E+  I   L FFA+S+ +V  N+       +  PE R +   Q   E +HS  + 
Sbjct: 66  -LSVSEKHFITHVLAFFAASDGIVLENLAARFLSDVQIPEARAFYGFQIAMENIHSEMYS 124

Query: 133 YIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSF 174
            ++ +   D  E   LFN    +P +  KA WAL +    SS SF
Sbjct: 125 LLLETYIKDSREKHKLFNAIENLPCVARKAEWALSWIH--SSTSF 167


>gi|115466138|ref|NP_001056668.1| Os06g0127900 [Oryza sativa Japonica Group]
 gi|55296211|dbj|BAD67929.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group]
 gi|113594708|dbj|BAF18582.1| Os06g0127900 [Oryza sativa Japonica Group]
 gi|186920368|gb|ACC95437.1| ribonucleotide diphosphate reductase small subunit 2 [Oryza sativa
           Japonica Group]
 gi|215706414|dbj|BAG93270.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222634884|gb|EEE65016.1| hypothetical protein OsJ_19968 [Oryza sativa Japonica Group]
          Length = 345

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 5/147 (3%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +L   SD   + P++Y   WE Y  A  + W   EV +  D   W +   L+ DER  + 
Sbjct: 23  LLAESSDRFSMFPIRYPQIWEFYKKAVASFWTAEEVDLSADARHWDA--ALSPDERHFVS 80

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
             L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  ++ +   D+ 
Sbjct: 81  HVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIRDDV 140

Query: 144 E---LFNMYREVPSITAKANWALQYTQ 167
           E   LF     VP++  KA+WA+++  
Sbjct: 141 EKDRLFRAIDTVPAVRRKADWAMRWID 167


>gi|7672989|gb|AAF66689.1|AF144620_1 ribonucleotide reductase small subunit [shrimp white spot syndrome
           virus]
          Length = 413

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 8/157 (5%)

Query: 17  VNVDDKRMLNARSDVNQLL--PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           + VD  + L  R + N+ +  P+ +   WE Y       W   E+  + D   W+    L
Sbjct: 50  MQVDTFKHLLTRENPNRFVSRPIVHEDLWEMYKKEVACFWTLEEIDFERDPKDWEK---L 106

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           T DE+  I + L FFASS+ +V  N+   + +    PE R +   Q   E++H + +  +
Sbjct: 107 TQDEKDFILQILAFFASSDGIVIENLTTRLRQVAQIPEARSFFDFQVGMESIHGNVYGEL 166

Query: 135 ITSLGLDEGE---LFNMYREVPSITAKANWALQYTQT 168
           I  L  DE +   LFN  +  P+I  K  WA+ + Q+
Sbjct: 167 IDRLVPDEKDKAILFNAAQHFPAIKKKEQWAINWMQS 203


>gi|291244313|ref|XP_002742041.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like
           [Saccoglossus kowalevskii]
          Length = 463

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 6/154 (3%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L    D   + P+KY   W+ Y  A  + W   EV +  DL  W     L ++ER 
Sbjct: 142 EETLLKPNIDRFVVFPIKYQDIWKYYKKAQASFWTVEEVDLGKDLPDWVK---LKEEERR 198

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I   L FFA+S+ +V  N+V    + +   E R +   Q   E VHS  +  +I +   
Sbjct: 199 FISHVLAFFAASDGIVLENLVQRFSQEVQVAEARCFYGFQIAMENVHSEMYSLLIDAYIK 258

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           ++ E   LF+    +P +  KA+WA+++ Q+  S
Sbjct: 259 EQEEKTRLFHAIDNMPCVKKKADWAIEWIQSEES 292


>gi|118089007|ref|XP_419948.2| PREDICTED: similar to small subunit ribonucleotide reductase
           isoform 2 [Gallus gallus]
          Length = 384

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W+ Y  A  + W   EV +  DL  W+S   L  +E+  I   L FFA+S+
Sbjct: 77  IFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWES---LKPEEKYFISHVLAFFAASD 133

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 134 GIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREFLFNAIE 193

Query: 151 EVPSITAKANWALQY 165
            +P +  KA+WA+++
Sbjct: 194 TLPCVKKKADWAIRW 208


>gi|283481249|emb|CAZ69365.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi
           virus 99B1]
          Length = 325

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+ +   +E+Y  A  + W  +E+ +  D   W     LT++E+  IK  L FFA+++
Sbjct: 15  LFPIVHEDIYEEYKKAEASLWGVSEIDISTDKTDWPK---LTENEQHFIKYILAFFATAD 71

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +  PE R +   Q   E VH+ T+  ++ SL  D+ E   LF   R
Sbjct: 72  GVVFENLVTNFASEIQYPEARCFYGVQMMIENVHAETYSMMLQSLVEDKDEQRNLFRAIR 131

Query: 151 EVPSITAKANWALQY 165
            + SI  KA+WAL++
Sbjct: 132 TIQSIKNKADWALKW 146


>gi|217032591|ref|ZP_03438080.1| hypothetical protein HPB128_159g17 [Helicobacter pylori B128]
 gi|298735909|ref|YP_003728434.1| ribonucleoside-diphosphate reductase subunit beta [Helicobacter
           pylori B8]
 gi|216945727|gb|EEC24352.1| hypothetical protein HPB128_159g17 [Helicobacter pylori B128]
 gi|298355098|emb|CBI65970.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter
           pylori B8]
          Length = 341

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 4/138 (2%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA   + +   N W   EV M DD    +    L+ +E++   R L      +SL 
Sbjct: 36  IKYQWADHLWKTMLANTWFAEEVSMNDDK---RDYLKLSAEEKIGYDRALAQLIFMDSLQ 92

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSIT 156
            NN++  I   +++PE    L+RQA+EEA+HSH +  ++ S+  +  E+++M+R    + 
Sbjct: 93  TNNLIDNINPFITSPEINLCLVRQAYEEALHSHAYAVMVESISANTEEIYDMWRNDMQLK 152

Query: 157 AKANWALQ-YTQTLSSPS 173
           +K ++  Q Y +   +P+
Sbjct: 153 SKNDYIAQVYMELAKNPT 170


>gi|27923845|sp|Q9QTF2|RIR2_RSIV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|5688956|dbj|BAA82755.1| ribonucleotide reductase small subunit [Red sea bream iridovirus]
 gi|327396894|dbj|BAK14260.1| ribonucleotide diphosphate reductase small subunit [Red sea bream
           iridovirus]
          Length = 312

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 5/133 (3%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           W  Y  A  + W   EV +  D+  W  K  LT+ ER  +   L FFA ++ +V +N+V 
Sbjct: 14  WAMYKKAVASFWTVEEVDLSTDVRHWTDK--LTEAERRFMSHILAFFAMADGIVGDNLVC 71

Query: 103 AIYRHLSN-PECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE--LFNMYREVPSITAKA 159
              + L + PE R +   Q   E +H+  +  +I +L   E +  LF+   ++P + AKA
Sbjct: 72  NFAKELDHIPEARAFYGFQVAIENIHAEMYTQLIITLVAKENQAALFSAAEDMPCVKAKA 131

Query: 160 NWALQYTQTLSSP 172
            WA Q+      P
Sbjct: 132 QWAAQWLNATHKP 144


>gi|317012862|gb|ADU83470.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Lithuania75]
          Length = 341

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 4/138 (2%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA   + +   N W   EV M DD    +    L+ +E++   R L      +SL 
Sbjct: 36  IKYQWADHLWKTMLANTWFAEEVSMNDDK---RDYLKLSAEEKIGYDRALAQLIFMDSLQ 92

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSIT 156
            NN++  I   +++PE    L+RQA+EEA+HSH +  ++ S+  +  E+++M+R    + 
Sbjct: 93  TNNLIDNINPFITSPEINLCLVRQAYEEALHSHAYAVMVESISANTEEIYDMWRNDMQLK 152

Query: 157 AKANWALQ-YTQTLSSPS 173
           +K ++  Q Y +   +P+
Sbjct: 153 SKNDYIAQVYMELAKNPT 170


>gi|62421216|gb|AAX82336.1| ribonucleotide reductase small chain [Orange-spotted grouper
           iridovirus]
          Length = 312

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 5/133 (3%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           W  Y  A  + W   EV +  D+  W  K  LT+ ER  +   L FFA ++ +V +N+V 
Sbjct: 14  WAMYKKAVASFWTVEEVDLSTDVRHWTDK--LTEAERRFMSHILAFFAMADGIVGDNLVC 71

Query: 103 AIYRHLSN-PECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE--LFNMYREVPSITAKA 159
              + L + PE R +   Q   E +H+  +  +I +L   E +  LF+   ++P + AKA
Sbjct: 72  NFAKELDHIPEARAFYGFQVAIENIHAEMYTQLIITLVAKENQAALFSAAEDMPCVKAKA 131

Query: 160 NWALQYTQTLSSP 172
            WA Q+      P
Sbjct: 132 QWAAQWLNATHKP 144


>gi|300676950|gb|ADK26821.1| ribonucleotide reductase M2 [Zonotrichia albicollis]
          Length = 390

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 8/159 (5%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           +P+ A  +R   +++ +L        + P++Y   W+ Y  A  + W   EV +  DL  
Sbjct: 59  NPVSA--ERPGTEEEPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQH 116

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           W+S   L  +E+  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +H
Sbjct: 117 WES---LKPEEKYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIH 173

Query: 128 SHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWAL 163
           S  +  +I +   D  E   LFN    +P +  KA+WA+
Sbjct: 174 SEMYSLLIDTYIKDSQEREFLFNAIETLPCVKKKADWAM 212


>gi|145352915|ref|XP_001420779.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581014|gb|ABO99072.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 346

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 6/141 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+K+   WE Y  A  + W   EV +  D   W +   L D+E+  I   L FFA+S+
Sbjct: 39  LFPIKHAKVWEMYKKAEASFWTAEEVDLTYDYRDWIT---LNDNEQHFISHVLAFFAASD 95

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD---EGELFNMYR 150
            +V  N+       +  PE R +   Q   E +HS  +  ++ +   D   + +LF    
Sbjct: 96  GIVLENLCSRFMTDVQLPEARSFYGFQLAIENIHSEMYSLLLDTYIKDPKKKSDLFRAIH 155

Query: 151 EVPSITAKANWALQYTQTLSS 171
            VP++  KA+WAL++  + +S
Sbjct: 156 TVPTVAKKADWALKWIGSDAS 176


>gi|207092116|ref|ZP_03239903.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori HPKX_438_AG0C1]
          Length = 341

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 4/138 (2%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA   + +   N W   EV M DD    +    L+ +E++   R L      +SL 
Sbjct: 36  IKYQWADHLWKTMLANTWFAEEVSMNDDK---RDYLKLSAEEKIGYDRALAQLIFMDSLQ 92

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSIT 156
            NN++  I   +++PE    L+RQA+EEA+HSH +  ++ S+  +  E+++M+R    + 
Sbjct: 93  TNNLIDNINPFITSPEINLCLVRQAYEEALHSHAYAVMVESISANTEEIYDMWRNDMQLK 152

Query: 157 AKANWALQ-YTQTLSSPS 173
           +K ++  Q Y +   +P+
Sbjct: 153 SKNDYIAQVYMELAKNPT 170


>gi|224048725|ref|XP_002196356.1| PREDICTED: ribonucleotide reductase M2 polypeptide [Taeniopygia
           guttata]
          Length = 390

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 12/172 (6%)

Query: 1   MANNTGLSPIQAGE------KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHW 54
           +A+ T     Q G+      +R   +++ +L        + P++Y   W+ Y  A  + W
Sbjct: 44  LASKTARRIFQEGDGNSVSVERPGTEEEPLLRENPRRFVIFPIQYHDIWQMYKKAEASFW 103

Query: 55  MPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECR 114
              EV +  DL  W+S   L  +E+  I   L FFA+S+ +V  N+V    + +   E R
Sbjct: 104 TAEEVDLSKDLQHWES---LKPEEKYFISHVLAFFAASDGIVNENLVERFSQEVQITEAR 160

Query: 115 QYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWAL 163
            +   Q   E +HS  +  +I +   D  E   LFN    +P +  KA+WA+
Sbjct: 161 CFYGFQIAMENIHSEMYSLLIDTYIKDSKEREFLFNAIETLPCVKKKADWAM 212


>gi|149408710|ref|XP_001506085.1| PREDICTED: similar to 5,10-methenyltetrahydrofolate synthetase
           [Ornithorhynchus anatinus]
          Length = 394

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 6/150 (4%)

Query: 19  VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
           V+D+ +L        + P++Y   W+ Y  A  + W   EV +  D+  W+S   L  +E
Sbjct: 72  VEDEPLLKENPRRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDIQHWES---LKPEE 128

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           +  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +I + 
Sbjct: 129 KYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTY 188

Query: 139 GLDEGE---LFNMYREVPSITAKANWALQY 165
             +  E   LFN    +P +  KA+WAL++
Sbjct: 189 IKEPKEREFLFNAIETLPCVKKKADWALRW 218


>gi|52077136|dbj|BAD46182.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group]
 gi|52077275|dbj|BAD46317.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group]
 gi|186920364|gb|ACC95435.1| ribonucleotide diphosphate reductase small subunit 1 [Oryza sativa
           Japonica Group]
          Length = 339

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 5/150 (3%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L   S+   + P++Y   WE Y  A  + W   EV +  D   W +   L+ DER 
Sbjct: 14  EEPLLAESSERFSMFPIRYPQIWEFYKKAVASFWTAEEVDLSADARHWDA--ALSPDERH 71

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL-- 138
            I   L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  ++ +   
Sbjct: 72  FISHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIR 131

Query: 139 -GLDEGELFNMYREVPSITAKANWALQYTQ 167
            G ++  LF     VP++  KA+WA+++  
Sbjct: 132 DGAEKDRLFRAIDTVPAVRRKADWAMRWID 161


>gi|255037048|ref|YP_003087669.1| Ribonucleoside-diphosphate reductase [Dyadobacter fermentans DSM
           18053]
 gi|254949804|gb|ACT94504.1| Ribonucleoside-diphosphate reductase [Dyadobacter fermentans DSM
           18053]
          Length = 331

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 9/144 (6%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+K+   WE Y     + W   E+ +  D+  W++   L+D ER  I   L FFA+S+
Sbjct: 21  LFPIKHSDIWEMYKRHEASFWTAEEIDLSQDMKDWEN---LSDGERHFISHVLAFFAASD 77

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+ +     +   E + +   Q   E +HS T+  +I +   D  E   L     
Sbjct: 78  GIVNENLAVNFLSEVQYAEAKCFYGFQIAMENIHSETYSLLIDTYIKDSAEKDRLLRAIE 137

Query: 151 EVPSITAKANWALQYTQTLSSPSF 174
            +P +  KA+WAL++   + SP F
Sbjct: 138 TIPCVQKKADWALKW---IDSPVF 158


>gi|254779643|ref|YP_003057749.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori B38]
 gi|254001555|emb|CAX29573.1| Ribonucleoside-diphosphate reductase subunit beta (Ribonucleotide
           reductase small subunit) [Helicobacter pylori B38]
          Length = 341

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 4/138 (2%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA   + +   N W   EV M DD    +    L+ +E++   R L      +SL 
Sbjct: 36  IKYQWADHLWKTMLANTWFAEEVSMNDDK---RDYLKLSTEEKIGYDRALAQLIFMDSLQ 92

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSIT 156
            NN++  +   +++PE    L+RQA+EEA+HSH +  ++ S+  +  E+++M+R    + 
Sbjct: 93  TNNLIDNVNPFITSPEINLCLVRQAYEEALHSHAYAVMVESISANTEEIYDMWRNDMQLK 152

Query: 157 AKANWALQ-YTQTLSSPS 173
           +K ++  Q Y +   +P+
Sbjct: 153 SKNDYIAQVYMELAKNPT 170


>gi|929959|gb|AAA74020.1| ribonuleotide reductase small subunit [Urechis caupo]
          Length = 399

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W+ Y  A  + W   EV +  D++ W+    L  +E+  +   L FFA+S+
Sbjct: 89  VFPIQYNDIWQMYKKAEASFWTAEEVDLSKDISDWEK---LKSEEKHFVSHVLAFFAASD 145

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 146 GIVNENLVERFSKEVQVTEARCFYGYQIAVENIHSEMYSLLIDTYVKDPTERDFLFNAIE 205

Query: 151 EVPSITAKANWALQY 165
            +P +  KA+WAL++
Sbjct: 206 TMPCVKEKADWALRW 220


>gi|157126966|ref|XP_001654749.1| ribonucleoside-diphosphate reductase small chain [Aedes aegypti]
 gi|15638625|gb|AAL05057.1|AF411297_1 ribonucleotide reductase 2 [Aedes aegypti]
 gi|82469974|gb|ABB77235.1| ribonucleotide reductase small subunit R2 [Aedes aegypti]
 gi|108873070|gb|EAT37295.1| ribonucleoside-diphosphate reductase small chain [Aedes aegypti]
          Length = 397

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 6/138 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W+ Y  A  + W   EV +  DLA W+    L   E+  I   L FFA+S+
Sbjct: 90  IFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLADWEK---LKSGEKHFISHVLAFFAASD 146

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +   E R +   Q   E VHS  +  +I +   D  E   LFN   
Sbjct: 147 GIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDSKEREYLFNAID 206

Query: 151 EVPSITAKANWALQYTQT 168
            +P +  KA+WAL +  +
Sbjct: 207 NLPCVKKKADWALNWISS 224


>gi|317178607|dbj|BAJ56395.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori F30]
          Length = 341

 Score = 66.6 bits (161), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 4/138 (2%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA   + +   N W   EV M DD    +    L+ +E++   R L      +SL 
Sbjct: 36  IKYQWADHLWKTMLANTWFAEEVSMNDDK---RDYLKLSTEEKIGYDRALAQLIFMDSLQ 92

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSIT 156
            NN++  +   +++PE    L+RQA+EEA+HSH +  ++ S+  +  E+++M+R    + 
Sbjct: 93  TNNLIDNVNPFITSPEINLCLVRQAYEEALHSHAYAVMVESISANTEEIYDMWRNDMQLK 152

Query: 157 AKANWALQ-YTQTLSSPS 173
           +K ++  Q Y +   +P+
Sbjct: 153 SKNDYIAQVYMELAKNPT 170


>gi|325181522|emb|CCA15972.1| ribonucleosidediphosphate reductase small chain put [Albugo
           laibachii Nc14]
          Length = 1611

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 6/168 (3%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           ++++  ++P +  E    +  +  L    +   L P++    W+ Y  A  + W   E+ 
Sbjct: 49  LSDSNSITPFKEKEMNGQLLPEPFLRENPNRFVLFPIQQSEIWDMYKKAEASFWTAEEID 108

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           +  D+  W +   ++D+ER  IK  L FFA+S+ +V  N+ +     +  PE R +   Q
Sbjct: 109 LVHDMNDWLN---ISDNERHFIKHVLAFFAASDGIVNENLAMNFSSEVQIPEARCFYGFQ 165

Query: 121 AFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
              E +HS  +  +I +   D  E   L      +P +T KA WAL++
Sbjct: 166 IAIENIHSEVYSLLIDTYIKDPTEKQHLLCAIETIPCVTNKAQWALKW 213


>gi|308184827|ref|YP_003928960.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori SJM180]
 gi|308060747|gb|ADO02643.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori SJM180]
          Length = 341

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 4/138 (2%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA   + +   N W   EV M DD    +    L+ +E++   R L      +SL 
Sbjct: 36  IKYQWADHLWKTMLANTWFAEEVSMNDDK---RDYLKLSAEEKIGYDRALAQLIFMDSLQ 92

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSIT 156
            NN++  +   +++PE    L+RQA+EEA+HSH +  ++ S+  +  E+++M+R    + 
Sbjct: 93  TNNLIDNVNPFITSPEINLCLVRQAYEEALHSHAYAVMVESISANTEEIYDMWRNDMQLK 152

Query: 157 AKANWALQ-YTQTLSSPS 173
           +K ++  Q Y +   +P+
Sbjct: 153 SKNDYIAQVYMELAKNPT 170


>gi|315586979|gb|ADU41360.1| ribonucleotide-diphosphate reductase beta subunit [Helicobacter
           pylori 35A]
          Length = 341

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 4/138 (2%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA   + +   N W   EV M DD    +    L+ +E++   R L      +SL 
Sbjct: 36  IKYQWADHLWKTMLANTWFAEEVSMNDDK---RDYLKLSAEEKIGYDRALAQLIFMDSLQ 92

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSIT 156
            NN++  +   +++PE    L+RQA+EEA+HSH +  ++ S+  +  E+++M+R    + 
Sbjct: 93  TNNLIDNVNPFITSPEINLCLVRQAYEEALHSHAYAVMVESISANTEEIYDMWRNDMQLK 152

Query: 157 AKANWALQ-YTQTLSSPS 173
           +K ++  Q Y +   +P+
Sbjct: 153 SKNDYIAQVYMELAKNPT 170


>gi|212723480|ref|NP_001131892.1| hypothetical protein LOC100193273 [Zea mays]
 gi|194692834|gb|ACF80501.1| unknown [Zea mays]
 gi|195624040|gb|ACG33850.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
          Length = 339

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 5/147 (3%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +L   SD   + P+++   WE Y  A  + W   EV +  D   W     L+ DER  I 
Sbjct: 17  LLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSADARHWD--EALSPDERHFIS 74

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
             L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  ++ +   D+ 
Sbjct: 75  HVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIRDDV 134

Query: 144 E---LFNMYREVPSITAKANWALQYTQ 167
           E   LF     VP++  KA+WA+++  
Sbjct: 135 EKDRLFRAIDTVPAVRRKADWAMRWID 161


>gi|217034470|ref|ZP_03439882.1| hypothetical protein HP9810_890g15 [Helicobacter pylori 98-10]
 gi|216943072|gb|EEC22549.1| hypothetical protein HP9810_890g15 [Helicobacter pylori 98-10]
 gi|317177841|dbj|BAJ55630.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori F16]
          Length = 341

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 4/138 (2%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA   + +   N W   EV M DD    +    L+ +E++   R L      +SL 
Sbjct: 36  IKYQWADHLWKTMLANTWFAEEVSMNDDK---RDYLKLSAEEKIGYDRALAQLIFMDSLQ 92

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSIT 156
            NN++  +   +++PE    L+RQA+EEA+HSH +  ++ S+  +  E+++M+R    + 
Sbjct: 93  TNNLIDNVNPFITSPEINLCLVRQAYEEALHSHAYAVMVESISANTEEIYDMWRNDMQLK 152

Query: 157 AKANWALQ-YTQTLSSPS 173
           +K ++  Q Y +   +P+
Sbjct: 153 SKNDYIAQVYMELAKNPT 170


>gi|317011285|gb|ADU85032.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori SouthAfrica7]
          Length = 341

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 4/138 (2%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA   + +   N W   EV M DD    +    L+ +E++   R L      +SL 
Sbjct: 36  IKYQWADHLWKTMLANTWFAEEVSMNDDK---RDYLKLSAEEKIGYDRALAQLIFMDSLQ 92

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSIT 156
            NN++  +   +++PE    L+RQA+EEA+HSH +  ++ S+  +  E+++M+R    + 
Sbjct: 93  TNNLIDNVNPFITSPEINLCLVRQAYEEALHSHAYAVMVESISANTEEIYDMWRNDMQLK 152

Query: 157 AKANWALQ-YTQTLSSPS 173
           +K ++  Q Y +   +P+
Sbjct: 153 SKNDYIAQVYMELAKNPT 170


>gi|308183194|ref|YP_003927321.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori PeCan4]
 gi|308065379|gb|ADO07271.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori PeCan4]
          Length = 341

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 4/138 (2%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA   + +   N W   EV M DD    +    L+ +E++   R L      +SL 
Sbjct: 36  IKYQWADHLWKTMLANTWFAEEVSMNDDK---RDYLKLSAEEKIGYDRALAQLIFMDSLQ 92

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSIT 156
            NN++  +   +++PE    L+RQA+EEA+HSH +  ++ S+  +  E+++M+R    + 
Sbjct: 93  TNNLIDNVNPFITSPEINLCLVRQAYEEALHSHAYAVMVESISANTEEIYDMWRNDMQLK 152

Query: 157 AKANWALQ-YTQTLSSPS 173
           +K ++  Q Y +   +P+
Sbjct: 153 SKNDYIAQVYMELAKNPT 170


>gi|109947017|ref|YP_664245.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           acinonychis str. Sheeba]
 gi|109714238|emb|CAJ99246.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter
           acinonychis str. Sheeba]
          Length = 341

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 4/138 (2%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA   + +   N W   EV M DD    +    L+ +E++   R L      +SL 
Sbjct: 36  IKYQWADHLWKTMLANTWFAEEVSMNDDK---RDYLKLSAEEKIGYDRALAQLIFMDSLQ 92

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSIT 156
            NN++  +   +++PE    L+RQA+EEA+HSH +  ++ S+  +  E+++M+R    + 
Sbjct: 93  TNNLIDNVNPFITSPEINLCLVRQAYEEALHSHAYAVMVESISANTEEIYDMWRNDMQLK 152

Query: 157 AKANWALQ-YTQTLSSPS 173
           +K ++  Q Y +   +P+
Sbjct: 153 SKNDYIAQVYMELAKNPT 170


>gi|261838422|gb|ACX98188.1| ribonucleoside-diphosphate reductase 1 beta subunit [Helicobacter
           pylori 51]
          Length = 341

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 4/138 (2%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA   + +   N W   EV M DD    +    L+ +E++   R L      +SL 
Sbjct: 36  IKYQWADHLWKTMLANTWFAEEVSMNDDK---RDYLKLSAEEKIGYDRALAQLIFMDSLQ 92

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSIT 156
            NN++  +   +++PE    L+RQA+EEA+HSH +  ++ S+  +  E+++M+R    + 
Sbjct: 93  TNNLIDNVNPFITSPEINLCLVRQAYEEALHSHAYAVMVESISANTEEIYDMWRNDMQLK 152

Query: 157 AKANWALQ-YTQTLSSPS 173
           +K ++  Q Y +   +P+
Sbjct: 153 SKNDYIAQVYMELAKNPT 170


>gi|297380266|gb|ADI35153.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori v225d]
 gi|308062365|gb|ADO04253.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Cuz20]
 gi|317180823|dbj|BAJ58609.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori F32]
          Length = 341

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 4/138 (2%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA   + +   N W   EV M DD    +    L+ +E++   R L      +SL 
Sbjct: 36  IKYQWADHLWKTMLANTWFAEEVSMNDDK---RDYLKLSAEEKIGYDRALAQLIFMDSLQ 92

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSIT 156
            NN++  +   +++PE    L+RQA+EEA+HSH +  ++ S+  +  E+++M+R    + 
Sbjct: 93  TNNLIDNVNPFITSPEINLCLVRQAYEEALHSHAYAVMVESISANTEEIYDMWRNDMQLK 152

Query: 157 AKANWALQ-YTQTLSSPS 173
           +K ++  Q Y +   +P+
Sbjct: 153 SKNDYIAQVYMELAKNPT 170


>gi|261839822|gb|ACX99587.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori 52]
          Length = 341

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 4/138 (2%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA   + +   N W   EV M DD    +    L+ +E++   R L      +SL 
Sbjct: 36  IKYQWADHLWKTMLANTWFAEEVSMNDDK---RDYLKLSAEEKIGYDRALAQLIFMDSLQ 92

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSIT 156
            NN++  +   +++PE    L+RQA+EEA+HSH +  ++ S+  +  E+++M+R    + 
Sbjct: 93  TNNLIDNVNPFITSPEINLCLVRQAYEEALHSHAYAVMVESISANTEEIYDMWRNDMQLK 152

Query: 157 AKANWALQ-YTQTLSSPS 173
           +K ++  Q Y +   +P+
Sbjct: 153 SKNDYIAQVYMELAKNPT 170


>gi|15232077|ref|NP_189342.1| TSO2 (TSO meaning 'ugly' in Chinese); oxidoreductase/
           ribonucleoside-diphosphate reductase/ transition metal
           ion binding [Arabidopsis thaliana]
 gi|75273949|sp|Q9LSD0|RIR2C_ARATH RecName: Full=Ribonucleoside-diphosphate reductase small chain C;
           AltName: Full=Ribonucleoside-diphosphate reductase TSO2
           subunit; AltName: Full=Ribonucleotide reductase small
           subunit C
 gi|9279629|dbj|BAB01087.1| ribonucleotide reductase [Arabidopsis thaliana]
 gi|17380726|gb|AAL36193.1| putative ribonucleotide reductase small subunit [Arabidopsis
           thaliana]
 gi|21436297|gb|AAM51287.1| putative ribonucleotide reductase small subunit [Arabidopsis
           thaliana]
          Length = 332

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 8/156 (5%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L    D   + P+ Y   WE Y  A  + W   EV +  D   W+  N L D ER 
Sbjct: 6   EEPLLTPTPDRFCMFPIHYPQIWEMYKKAEASFWTAEEVDLSQDNRDWE--NSLNDGERH 63

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            IK  L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  ++ +   
Sbjct: 64  FIKHVLAFFAASDGIVLENLASRFMSDVQVSEARAFYGFQIAIENIHSEMYSLLLDTYIK 123

Query: 141 DEGE---LFNMYREVPSITAKANWALQY---TQTLS 170
           D  E   LF     +P +  KA WA+++   +QT +
Sbjct: 124 DNKERDHLFRAIETIPCVAKKAQWAMKWIDGSQTFA 159


>gi|188527870|ref|YP_001910557.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Shi470]
 gi|188144110|gb|ACD48527.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Shi470]
 gi|308063873|gb|ADO05760.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Sat464]
          Length = 341

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 4/138 (2%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA   + +   N W   EV M DD    +    L+ +E++   R L      +SL 
Sbjct: 36  IKYQWADHLWKTMLANTWFAEEVSMNDDK---RDYLKLSAEEKIGYDRALAQLIFMDSLQ 92

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSIT 156
            NN++  +   +++PE    L+RQA+EEA+HSH +  ++ S+  +  E+++M+R    + 
Sbjct: 93  TNNLIDNVNPFITSPEINLCLVRQAYEEALHSHAYAVMVESISANTEEIYDMWRNDMQLK 152

Query: 157 AKANWALQ-YTQTLSSPS 173
           +K ++  Q Y +   +P+
Sbjct: 153 SKNDYIAQVYMELAKNPT 170


>gi|108563454|ref|YP_627770.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori HPAG1]
 gi|107837227|gb|ABF85096.1| ribonucleoside diphosphate reductase, beta subunit [Helicobacter
           pylori HPAG1]
          Length = 341

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 4/138 (2%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA   + +   N W   EV M DD    +    L+ +E++   R L      +SL 
Sbjct: 36  IKYQWADHLWKTMLANTWFAEEVSMNDDK---RDYLKLSAEEKIGYDRALAQLIFMDSLQ 92

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSIT 156
            NN++  +   +++PE    L+RQA+EEA+HSH +  ++ S+  +  E+++M+R    + 
Sbjct: 93  TNNLIDNVNPFITSPEINLCLVRQAYEEALHSHAYAVMVESISANTEEIYDMWRNDMQLK 152

Query: 157 AKANWALQ-YTQTLSSPS 173
           +K ++  Q Y +   +P+
Sbjct: 153 SKNDYIAQVYMELAKNPT 170


>gi|126303832|ref|XP_001381111.1| PREDICTED: similar to hCG23833, [Monodelphis domestica]
          Length = 493

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 76/167 (45%), Gaps = 14/167 (8%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           A N   SP +  E  +  + +R +        + P++Y   W  Y  A  + W   EV +
Sbjct: 162 APNEPASPSKEDEPLLRENPRRFV--------IFPIEYHDIWHMYKKAEASFWTAEEVDL 213

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D+  W++   L  +E+  I   L FFA+S+ +V  N+V    + +   E R +   Q 
Sbjct: 214 SKDIQHWET---LKSEEKYFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQI 270

Query: 122 FEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
             E +HS  +  +I +   D  E   LFN    +P +  KA+WAL++
Sbjct: 271 AMENIHSEMYSLLIDTYIKDPKEREFLFNAIETLPCVKKKADWALRW 317


>gi|544843|gb|AAB29634.1| C8L product [variola virus VAR, India-1967, Peptide, 333 aa]
          Length = 333

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 6/132 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W  Y  A  + W+  EV +  D+  W   N LT DE+  IK  L FFA+S+
Sbjct: 28  IFPIQYHDIWNMYKKAEASFWIVEEVDISKDINDW---NKLTPDEKYFIKHVLAFFAASD 84

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 85  GIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNYLFNAIE 144

Query: 151 EVPSITAKANWA 162
            +P +  KA+WA
Sbjct: 145 TMPCVKKKADWA 156


>gi|284039889|ref|YP_003389819.1| ribonucleoside-diphosphate reductase [Spirosoma linguale DSM 74]
 gi|283819182|gb|ADB41020.1| Ribonucleoside-diphosphate reductase [Spirosoma linguale DSM 74]
          Length = 349

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 6/140 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+K+   WE Y +   + W   E+ +  D+  W   N L D ER  I   L FFA+S+
Sbjct: 20  LFPIKHWDIWEYYKTHEASFWTAEEIDLGQDMKDW---NSLNDGERHFISHVLAFFAASD 76

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+ +     +   E + +   Q   E +HS T+  +I +   D  E   L N   
Sbjct: 77  GIVNENLAVNFLSEVQYAEAKCFYGFQVMMENIHSETYSLLIDTYIKDPVEKDRLLNAID 136

Query: 151 EVPSITAKANWALQYTQTLS 170
            +P +  KA WAL++    S
Sbjct: 137 TIPCVQKKAEWALRWIDNGS 156


>gi|297818266|ref|XP_002877016.1| hypothetical protein ARALYDRAFT_484491 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322854|gb|EFH53275.1| hypothetical protein ARALYDRAFT_484491 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 329

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 8/156 (5%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L    D   + P+ Y   WE Y  A  + W   EV +  D   W+  N L D ER 
Sbjct: 3   EEPLLTPTPDRFCMFPIHYPQIWEMYKKAEASFWTAEEVDLSQDNRDWE--NNLNDGERH 60

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            IK  L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  ++ +   
Sbjct: 61  FIKHVLAFFAASDGIVLENLASRFMSDVQVSEARAFYGFQIAIENIHSEMYSLLLDTYIK 120

Query: 141 DEGE---LFNMYREVPSITAKANWALQY---TQTLS 170
           D  E   LF     +P +  KA WA+++   +QT +
Sbjct: 121 DNKERDHLFRAIETIPCVAKKAQWAMKWIDGSQTFA 156


>gi|322510501|gb|ADX05815.1| putative ribonucleotide reductase small subunit [Organic Lake
           phycodnavirus 1]
          Length = 324

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 68/164 (41%), Gaps = 18/164 (10%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+     W+ Y    +  W   E+    DL  W   N L  +E+  IK  L FFASS+
Sbjct: 19  MFPIVDEAIWKMYKKQVDCFWRAEEIDTSKDLNHW---NKLQPEEQYYIKMILAFFASSD 75

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+ L     +   E R +   Q   E +HS T+  +I S   DE E   LF+   
Sbjct: 76  GIVLENLGLRFMNEVQLSEARAFYGFQIAMENIHSETYSLLIDSYIKDENEKNKLFHSLE 135

Query: 151 EVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             P I  K  WA++            W   ++S   TR + F C
Sbjct: 136 HFPCIEKKGKWAMK------------WINDKKSNFSTRLVAFAC 167


>gi|322795965|gb|EFZ18591.1| hypothetical protein SINV_11129 [Solenopsis invicta]
          Length = 426

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 62/134 (46%), Gaps = 6/134 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQD-DLALWKSKNGLTDDERLMIKRNLGFFASS 92
           + P++Y   WE Y  A  + W   EVP+   D   W  K  L  DE+  I   L FFA+S
Sbjct: 112 IFPIQYPDIWEMYKKAVASFWTIEEVPLHKLDKKDWDEK--LNSDEKYFISHVLAFFAAS 169

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMY 149
           + +V  N++    + +   E R +   Q   E +HS  +  +I +   D  E   LFN  
Sbjct: 170 DGIVNENLIERFSQEVKIAEARCFYGFQIAIENIHSEMYSLLIETYISDPKEKDFLFNAI 229

Query: 150 REVPSITAKANWAL 163
             +P +  KA WAL
Sbjct: 230 ETLPCVGKKAKWAL 243


>gi|317009697|gb|ADU80277.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori India7]
          Length = 341

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 4/138 (2%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA   + +   N W   EV M DD    +    L+ +E++   R L      +SL 
Sbjct: 36  IKYQWADHLWKTMLANTWFAEEVSMNDDK---RDYLKLSVEEKIGYDRALAQLIFMDSLQ 92

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSIT 156
            NN++  +   +++PE    L+RQA+EEA+HSH +  ++ S+  +  E+++M+R    + 
Sbjct: 93  TNNLIDNVNPFITSPEINLCLVRQAYEEALHSHAYAVMVESISANTEEIYDMWRNDMQLK 152

Query: 157 AKANWALQ-YTQTLSSPS 173
           +K ++  Q Y +   +P+
Sbjct: 153 SKNDYIAQVYMELAKNPT 170


>gi|56713400|gb|AAW23440.1| ribonucleoside-diphosphate reductase [Vaccinia virus]
 gi|56713684|gb|AAW23722.1| ribonucleoside-diphosphate reductase [Vaccinia virus]
 gi|88854075|gb|ABD52493.1| ribonucleoside-diphosphate reductase subunit [Vaccinia virus]
 gi|167412519|gb|ABZ79953.1| ribonucleotide reductase small subunit [Vaccinia virus GLV-1h68]
          Length = 319

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 6/132 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W  Y  A  + W   EV +  D+  W   N LT DE+  IK  L FFA+S+
Sbjct: 14  IFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPDEKYFIKHVLAFFAASD 70

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 71  GIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNYLFNAIE 130

Query: 151 EVPSITAKANWA 162
            +P +  KA+WA
Sbjct: 131 TMPCVKKKADWA 142


>gi|113195221|ref|YP_717351.1| ribonucleotide reductase small subunit [Taterapox virus]
 gi|90660497|gb|ABD97610.1| ribonucleotide reductase small subunit [Taterapox virus]
          Length = 319

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 6/132 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W  Y  A  + W   EV +  D+  W   N LT DE+  IK  L FFA+S+
Sbjct: 14  IFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPDEKYFIKHVLAFFAASD 70

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 71  GIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNYLFNAIE 130

Query: 151 EVPSITAKANWA 162
            +P +  KA+WA
Sbjct: 131 TMPCVKKKADWA 142


>gi|22164633|ref|NP_671546.1| EVM028 [Ectromelia virus]
 gi|22123774|gb|AAM92332.1|AF523264_28 EVM028 [Ectromelia virus]
          Length = 319

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 6/132 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W  Y  A  + W   EV +  D+  W   N LT DE+  IK  L FFA+S+
Sbjct: 14  IFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPDEKYFIKHVLAFFAASD 70

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 71  GIVNENLAERFCTEVQVTEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNYLFNAIE 130

Query: 151 EVPSITAKANWA 162
            +P +  KA+WA
Sbjct: 131 TMPCVKKKADWA 142


>gi|311977695|ref|YP_003986815.1| ribonucleoside-diphosphate reductase small chain [Acanthamoeba
           polyphaga mimivirus]
 gi|77416594|sp|Q7T6Y9|RIR2_MIMIV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|55664859|gb|AAQ09571.2| ribonucleotide reductase small subunit [Acanthamoeba polyphaga
           mimivirus]
 gi|308204332|gb|ADO18133.1| ribonucleoside-diphosphate reductase small chain [Acanthamoeba
           polyphaga mimivirus]
          Length = 417

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 75/150 (50%), Gaps = 9/150 (6%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +L+ +S+   + P+KY   W+ Y     N+W   EV +  D+  W   N L+DD+R  I 
Sbjct: 101 ILSLKSEQYTVHPIKYQKVWDNYKDQMKNYWTVEEVDLAKDVNDW--NNHLSDDDRNFIM 158

Query: 84  RNLGFFASSESLVANNIV--LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
             L FFA+++ +V  NI   L     +   EC  Y  + A E A H   +  ++T+   D
Sbjct: 159 HVLAFFAAADGIVNANIKENLIDVVKIKEAEC-AYGFQYAMENA-HGEMYSLMLTTFVKD 216

Query: 142 EG---ELFNMYREVPSITAKANWALQYTQT 168
           +    +L N  + +PSI  KA+W  ++ ++
Sbjct: 217 DALRNKLINSIKTMPSIKKKADWCNKWIKS 246


>gi|438946|gb|AAA60776.1| homolog of vaccinia virus CDS F4L (ribonucleotide reductase, small
           chain); putative [Variola major virus]
 gi|94484491|gb|ABF23604.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94484688|gb|ABF23800.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94484886|gb|ABF23997.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109724274|gb|ABG43399.1| ribonucleotide reductase small subunit [Variola virus]
          Length = 333

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 6/141 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W  Y  A  + W   EV +  D+  W   N LT DE+  IK  L FFA+S+
Sbjct: 28  IFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPDEKYFIKHVLAFFAASD 84

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 85  GIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNYLFNAIE 144

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +P +  KA+WA ++    +S
Sbjct: 145 TMPCVKKKADWAQKWIHDSAS 165


>gi|90660281|gb|ABD97395.1| ribonucleotide reductase small subunit [Cowpox virus]
          Length = 333

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 6/132 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W  Y  A  + W   EV +  D+  W   N LT DE+  IK  L FFA+S+
Sbjct: 28  IFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPDEKYFIKHVLAFFAASD 84

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 85  GIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNYLFNAIE 144

Query: 151 EVPSITAKANWA 162
            +P +  KA+WA
Sbjct: 145 TMPCVKKKADWA 156


>gi|44971395|gb|AAS49745.1| RPXV032 [Rabbitpox virus]
          Length = 319

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 6/132 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W  Y  A  + W   EV +  D+  W   N LT DE+  IK  L FFA+S+
Sbjct: 14  IFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPDEKYFIKHVLAFFAASD 70

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 71  GIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNYLFNAIE 130

Query: 151 EVPSITAKANWA 162
            +P +  KA+WA
Sbjct: 131 TMPCVKKKADWA 142


>gi|56404698|sp|O57175|RIR2_VACCA RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|2772676|gb|AAB96415.1| ribonucleotide reductase, small subunit [Vaccinia virus]
 gi|47088360|gb|AAT10430.1| ribonucleotide reductase small subunit [Vaccinia virus]
 gi|160857924|emb|CAM58212.1| ribonucleotide reductase small subunit [Vaccinia virus Ankara]
          Length = 319

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 6/132 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W  Y  A  + W   EV +  D+  W   N LT DE+  IK  L FFA+S+
Sbjct: 14  IFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPDEKYFIKHVLAFFAASD 70

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 71  GIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNYLFNAIE 130

Query: 151 EVPSITAKANWA 162
            +P +  KA+WA
Sbjct: 131 TMPCVKKKADWA 142


>gi|111184227|gb|ABH08147.1| HSPV044 [Horsepox virus]
          Length = 319

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 6/132 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W  Y  A  + W   EV +  D+  W   N LT DE+  IK  L FFA+S+
Sbjct: 14  IFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPDEKYFIKHVLAFFAASD 70

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 71  GIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNYLFNAIE 130

Query: 151 EVPSITAKANWA 162
            +P +  KA+WA
Sbjct: 131 TMPCVKKKADWA 142


>gi|6969682|gb|AAF33894.1| TF4L [Vaccinia virus Tian Tan]
          Length = 319

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 6/132 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W  Y  A  + W   EV +  D+  W   N LT DE+  IK  L FFA+S+
Sbjct: 14  IFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPDEKYFIKHVLAFFAASD 70

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 71  GIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNYLFNAIE 130

Query: 151 EVPSITAKANWA 162
            +P +  KA+WA
Sbjct: 131 TMPCVKKKADWA 142


>gi|116326775|ref|YP_803312.1| hypothetical protein TNAV2c_gp089 [Trichoplusia ni ascovirus 2c]
 gi|102231783|gb|ABF70606.1| hypothetical protein [Trichoplusia ni ascovirus 2c]
          Length = 269

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 6/129 (4%)

Query: 46  YLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIY 105
           Y  A  + W   EV +  DL+ W   + L DDE+  IK  L FFA+S+ +V  N+V    
Sbjct: 2   YKKAEASFWTVEEVDLSKDLSDW---DKLKDDEKHFIKHILAFFAASDGIVNENLVERFS 58

Query: 106 RHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWA 162
           + +   E R +   Q   E VHS  +  +I +   D  E   LFN    +P I  KA+WA
Sbjct: 59  QEVQITEARCFYGFQIAMENVHSEMYSLLIDTYIRDSDERDYLFNAIETLPCIKKKADWA 118

Query: 163 LQYTQTLSS 171
           L++  + S+
Sbjct: 119 LKWISSNSA 127


>gi|50237508|gb|AAT71841.1| ribonucleotide reductase small chain [Rock bream iridovirus]
          Length = 312

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 5/133 (3%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           W  Y  A  + W   EV +  D+  W  K  LT+ ER  +   L FFA ++ +V +N+V 
Sbjct: 14  WAMYKKAVASFWTVEEVDLSTDVRHWTDK--LTEAERRFMSHILAFFAMADGIVGDNLVC 71

Query: 103 AIYRHLSN-PECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE--LFNMYREVPSITAKA 159
              + L + PE R +   Q   + +H+  +  +I +L   E +  LF+   ++P + AKA
Sbjct: 72  NFAKELDHIPEARAFYGFQVAMKNIHAEMYTQLIITLVAKENQAALFSAAEDMPCVKAKA 131

Query: 160 NWALQYTQTLSSP 172
            WA Q+      P
Sbjct: 132 QWAAQWLNATHKP 144


>gi|237749822|ref|ZP_04580302.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           bilis ATCC 43879]
 gi|229374572|gb|EEO24963.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           bilis ATCC 43879]
          Length = 351

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 80/157 (50%), Gaps = 5/157 (3%)

Query: 19  VDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           V+++R+     + + +L  +KY WA+    +   N W P EV M  D   +     LT  
Sbjct: 26  VNERRIFGGNPTAIFELNKIKYQWAYNLLRTMFANTWFPEEVNMNQDKRDYME---LTLQ 82

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+    R L      +SL  NN+   I  +++ PE    L+RQAFEE++H+ ++  ++ S
Sbjct: 83  EKQGYDRALAQLIFMDSLQTNNLTDNINPYITCPEINMLLVRQAFEESLHAQSYAVMVDS 142

Query: 138 LGLDEGELFNMYREVPSITAKANW-ALQYTQTLSSPS 173
           +  +  E++ M+R+   + +K ++ A  YT    +P+
Sbjct: 143 ISANTDEIYQMWRKDDKLRSKNDYIADVYTDLAKNPT 179


>gi|17974949|ref|NP_536463.1| C10L [Monkeypox virus Zaire-96-I-16]
 gi|17529816|gb|AAL40494.1|AF380138_36 C10L [Monkeypox virus Zaire-96-I-16]
 gi|51342196|gb|AAU01240.1| MPXV-WRAIR030 [Monkeypox virus]
 gi|58220500|gb|AAW67788.1| MPXV-SL-030 [Monkeypox virus]
 gi|59858836|gb|AAX09131.1| MPXV-COP-030 [Monkeypox virus]
 gi|68448710|gb|AAY96833.1| ribonucleotide reductase small subunit [Monkeypox virus]
 gi|68448912|gb|AAY97034.1| ribonucleotide reductase small subunit [Monkeypox virus]
 gi|68449113|gb|AAY97234.1| ribonucleotide reductase small subunit [Monkeypox virus]
 gi|68449313|gb|AAY97433.1| ribonucleotide reductase small subunit [Monkeypox virus]
 gi|68449512|gb|AAY97631.1| ribonucleotide reductase small subunit [Monkeypox virus]
 gi|300872658|gb|ADK39060.1| ribonucleotide reductase small subunit [Monkeypox virus]
          Length = 319

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 6/132 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W  Y  A  + W   EV +  D+  W   N LT DE+  IK  L FFA+S+
Sbjct: 14  IFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPDEKYFIKHVLAFFAASD 70

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 71  GIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNYLFNAIE 130

Query: 151 EVPSITAKANWA 162
            +P +  KA+WA
Sbjct: 131 TMPCVKKKADWA 142


>gi|1808636|emb|CAA64118.1| G4L protein [Cowpox virus]
          Length = 319

 Score = 65.5 bits (158), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 6/132 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W  Y  A  + W   EV +  D+  W   N LT DE+  IK  L FFA+S+
Sbjct: 14  IFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPDEKYFIKHVLAFFAASD 70

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 71  GIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNYLFNAIE 130

Query: 151 EVPSITAKANWA 162
            +P +  KA+WA
Sbjct: 131 TMPCVKKKADWA 142


>gi|159465291|ref|XP_001690856.1| ribonucleoside-diphosphate reductase small subunit [Chlamydomonas
           reinhardtii]
 gi|158279542|gb|EDP05302.1| ribonucleoside-diphosphate reductase small subunit [Chlamydomonas
           reinhardtii]
          Length = 493

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 6/156 (3%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           R  + D+ +L    +   L P+KY   WE Y     + W   EV    DL  W     L 
Sbjct: 161 RSTLLDEDLLRENPNRFTLFPIKYPDLWEFYKQGVASFWTVEEVDFTGDLIDWHR---LK 217

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
            +E+  IK  L FFA+S+ +V  N+       +  PE R +   Q   E VHS  +  ++
Sbjct: 218 PEEQRFIKYVLAFFAASDGIVMENLAARFMSDIQVPEARAFYGFQIAMENVHSEMYSVLL 277

Query: 136 TSLGLDEGE---LFNMYREVPSITAKANWALQYTQT 168
                +  E   LF+    +P++  KA WA+++  +
Sbjct: 278 DHYVREPEERNQLFDAIHTIPTVAKKAEWAMRWISS 313


>gi|4836362|gb|AAD30422.1|AF117061_1 ribonucleotide reductase R2 subunit [Aedes albopictus]
          Length = 398

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 6/138 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W+ Y  A  + W   EV +  DLA W+    L   E+  I   L FFA+S+
Sbjct: 91  IFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLADWEK---LKSGEKHFISHVLAFFAASD 147

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +   E R +   Q   E VHS  +  +I +   D  E   LFN   
Sbjct: 148 GIVNVNLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDSKEREYLFNAID 207

Query: 151 EVPSITAKANWALQYTQT 168
            +P +  KA+WAL +  +
Sbjct: 208 NLPCVKKKADWALNWISS 225


>gi|292658982|gb|ADE34370.1| ribonucleotide reductase small chain [Turbot reddish body
           iridovirus]
          Length = 312

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 5/133 (3%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           W  Y  A  + W   EV +  D+  W  K  LT+ ER  +   L FFA ++ +V +N+V 
Sbjct: 14  WAMYKKAVASFWTVEEVDLSTDVRHWTDK--LTEAERRFMSHILAFFAMADGIVGDNLVC 71

Query: 103 AIYRHLSN-PECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE--LFNMYREVPSITAKA 159
              + L + PE R +   +   E +H+  +  +I +L   E +  LF+   ++P + AKA
Sbjct: 72  NFAKELDHIPEARAFYGFRVAMENIHAEMYTQLIITLVAKENQAALFSAAEDMPCVKAKA 131

Query: 160 NWALQYTQTLSSP 172
            WA Q+      P
Sbjct: 132 QWAAQWLNATHKP 144


>gi|226528734|ref|NP_001150842.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
 gi|195642302|gb|ACG40619.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
          Length = 339

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 13/169 (7%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           A  T L P  A E         +L   SD   + P+++   WE Y  A  + W   EV +
Sbjct: 3   AAPTLLPPCDAEEP--------LLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVGL 54

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D   W     L+ DER  I   L FFA+S+ +V  N+       +   E R +   Q 
Sbjct: 55  SADARHWD--EALSPDERHFISHVLAFFAASDGIVLENLASRFMTDVQVAEARAFYGFQI 112

Query: 122 FEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQ 167
             E +HS  +  ++ +   D  E   LF     VP++  KA+WA+++  
Sbjct: 113 AIENIHSEMYSLLLETYIRDHVEKDRLFRAIDTVPAVRRKADWAMRWID 161


>gi|297209|emb|CAA48969.1| C8L [Variola virus]
 gi|745144|prf||2015436AF C8L gene
          Length = 333

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 6/132 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W  Y  A  + W   EV +  D+  W   N LT DE+  IK  L FFA+S+
Sbjct: 28  IFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPDEKYFIKHVLAFFAASD 84

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 85  GIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNYLFNAIE 144

Query: 151 EVPSITAKANWA 162
            +P +  KA+WA
Sbjct: 145 TMPCVKKKADWA 156


>gi|38229183|ref|NP_938276.1| 20L [Yaba monkey tumor virus]
 gi|38000454|gb|AAR07377.1| 20L [Yaba monkey tumor virus]
          Length = 325

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 6/141 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+ Y   W  Y  A  + W   EV +  D   W     L+++E+  IK  L FFA+S+
Sbjct: 18  VFPIVYKDIWMMYKKAVASFWTVEEVDLSKDFPDWLK---LSENEKKFIKHILAFFAASD 74

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+    Y  +   E R +   Q   E +HS  +  +I +  LD  E   LFN   
Sbjct: 75  GIVNENLAERFYSEVQVSEARCFYGFQIAMENIHSEMYSLLIDTYILDSKEKNYLFNAIE 134

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +  +  KANWA ++ ++ +S
Sbjct: 135 NMNCVKQKANWARKWIESKNS 155


>gi|306478720|ref|NP_042072.2| Ribonucleoside-diphosphate reductase small chain [Variola virus]
 gi|464615|sp|P33799|RIR2_VAR67 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
          Length = 319

 Score = 65.5 bits (158), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 6/132 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W  Y  A  + W   EV +  D+  W   N LT DE+  IK  L FFA+S+
Sbjct: 14  IFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPDEKYFIKHVLAFFAASD 70

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 71  GIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNYLFNAIE 130

Query: 151 EVPSITAKANWA 162
            +P +  KA+WA
Sbjct: 131 TMPCVKKKADWA 142


>gi|66275840|ref|YP_232925.1| ribonucleotide reductase small subunit [Vaccinia virus]
 gi|132629|sp|P11158|RIR2_VACCV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|335624|gb|AAA48244.1| F4L protein [Vaccinia virus]
 gi|335809|gb|AAA88680.1| ribonucleotide reductase (EC 1.17.4.1) small subunit [Vaccinia
           virus]
 gi|29692149|gb|AAO89322.1| ribonucleotide reductase small subunit [Vaccinia virus WR]
          Length = 319

 Score = 65.1 bits (157), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 6/132 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W  Y  A  + W   EV +  D+  W   N LT DE+  IK  L FFA+S+
Sbjct: 14  IFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPDEKYFIKHVLAFFAASD 70

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 71  GIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNYLFNAIE 130

Query: 151 EVPSITAKANWA 162
            +P +  KA+WA
Sbjct: 131 TMPCVKKKADWA 142


>gi|132628|sp|P20493|RIR2_VACCC RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|335366|gb|AAA48018.1| putative F4L [Vaccinia virus Copenhagen]
          Length = 319

 Score = 65.1 bits (157), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 6/132 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W  Y  A  + W   EV +  D+  W   N LT DE+  IK  L FFA+S+
Sbjct: 14  IFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPDEKYFIKHVLAFFAASD 70

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 71  GIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNYLFNAIE 130

Query: 151 EVPSITAKANWA 162
            +P +  KA+WA
Sbjct: 131 TMPCVKKKADWA 142


>gi|37551487|gb|AAQ93139.1| ribonucleotide reductase small subunit [Vaccinia virus]
 gi|38348909|gb|AAR17885.1| ribonucleotide reductase small subunit [Vaccinia virus]
 gi|88900660|gb|ABD57572.1| VACV040 [Vaccinia virus]
 gi|90819703|gb|ABD98513.1| VACV-DUKE-051 [Vaccinia virus]
          Length = 319

 Score = 65.1 bits (157), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 6/132 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W  Y  A  + W   EV +  D+  W   N LT DE+  IK  L FFA+S+
Sbjct: 14  IFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPDEKYFIKHVLAFFAASD 70

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 71  GIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNYLFNAIE 130

Query: 151 EVPSITAKANWA 162
            +P +  KA+WA
Sbjct: 131 TMPCVKKKADWA 142


>gi|885717|gb|AAA69333.1| C8L [Variola virus]
 gi|885826|gb|AAA69439.1| C8L [Variola virus]
 gi|94483878|gb|ABF22994.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94484081|gb|ABF23196.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94485084|gb|ABF24194.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94485286|gb|ABF24395.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94485489|gb|ABF24597.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94485894|gb|ABF25000.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94487109|gb|ABF26209.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94487515|gb|ABF26613.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94487716|gb|ABF26813.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94488123|gb|ABF27218.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94488323|gb|ABF27417.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94488523|gb|ABF27616.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94488724|gb|ABF27816.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94488925|gb|ABF28016.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94489125|gb|ABF28215.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94489324|gb|ABF28413.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94489527|gb|ABF28615.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94489726|gb|ABF28813.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94490135|gb|ABF29220.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109724070|gb|ABG43196.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109724681|gb|ABG43804.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109724885|gb|ABG44007.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109725088|gb|ABG44209.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109725293|gb|ABG44413.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109725496|gb|ABG44615.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109725700|gb|ABG44818.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109725903|gb|ABG45020.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109726107|gb|ABG45223.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109726310|gb|ABG45425.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109726513|gb|ABG45627.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635013|gb|ABU91466.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635031|gb|ABU91483.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635049|gb|ABU91500.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635067|gb|ABU91517.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635103|gb|ABU91551.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635121|gb|ABU91568.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635139|gb|ABU91585.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635158|gb|ABU91603.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635176|gb|ABU91620.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635194|gb|ABU91637.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635212|gb|ABU91654.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635230|gb|ABU91671.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635248|gb|ABU91688.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635266|gb|ABU91705.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635284|gb|ABU91722.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635320|gb|ABU91756.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635338|gb|ABU91773.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635356|gb|ABU91790.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635374|gb|ABU91807.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635392|gb|ABU91824.1| ribonucleotide reductase small subunit [Variola virus]
 gi|157739431|gb|ABU91739.1| ribonucleotide reductase small subunit [Variola virus]
          Length = 319

 Score = 65.1 bits (157), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 6/132 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W  Y  A  + W   EV +  D+  W   N LT DE+  IK  L FFA+S+
Sbjct: 14  IFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPDEKYFIKHVLAFFAASD 70

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 71  GIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNYLFNAIE 130

Query: 151 EVPSITAKANWA 162
            +P +  KA+WA
Sbjct: 131 TMPCVKKKADWA 142


>gi|317182342|dbj|BAJ60126.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori F57]
          Length = 341

 Score = 65.1 bits (157), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 72/138 (52%), Gaps = 4/138 (2%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA   + +   N W   EV M DD    +    L+ +E++   R L      +SL 
Sbjct: 36  IKYQWADHLWKTMLANTWFAEEVSMNDDK---RDYLKLSAEEKIGYDRALAQLIFMDSLQ 92

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSIT 156
            NN++  +   +++PE    L+RQA+EEA+HSH +  ++ S+  +  E+++M+R    + 
Sbjct: 93  TNNLIDNVNPFITSPEINLCLVRQAYEEALHSHAYAVMVESISANTEEIYDMWRNDMQLK 152

Query: 157 AKANWALQ-YTQTLSSPS 173
            K ++  Q Y +   +P+
Sbjct: 153 NKNDYIAQVYMELAKNPT 170


>gi|885759|gb|AAA69374.1| E4L [Variola virus]
 gi|5830589|emb|CAB54628.1| E4L protein [Variola minor virus]
 gi|94483674|gb|ABF22791.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94484287|gb|ABF23401.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94485692|gb|ABF24799.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94486095|gb|ABF25200.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94486298|gb|ABF25402.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94486501|gb|ABF25604.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94486703|gb|ABF25805.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94486906|gb|ABF26007.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94487312|gb|ABF26411.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94487921|gb|ABF27017.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94489931|gb|ABF29017.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109724476|gb|ABG43600.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635085|gb|ABU91534.1| ribonucleotide reductase small subunit [Variola virus]
          Length = 319

 Score = 65.1 bits (157), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 6/132 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W  Y  A  + W   EV +  D+  W   N LT DE+  IK  L FFA+S+
Sbjct: 14  IFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPDEKYFIKHVLAFFAASD 70

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 71  GIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNYLFNAIE 130

Query: 151 EVPSITAKANWA 162
            +P +  KA+WA
Sbjct: 131 TMPCVKKKADWA 142


>gi|322378346|ref|ZP_08052803.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           suis HS1]
 gi|322379688|ref|ZP_08054002.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           suis HS5]
 gi|321147887|gb|EFX42473.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           suis HS5]
 gi|321149232|gb|EFX43675.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           suis HS1]
          Length = 342

 Score = 65.1 bits (157), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 79/162 (48%), Gaps = 10/162 (6%)

Query: 19  VDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG---L 74
           V D+++     + +  L  +KY WA + + +   N W P EV M  D      KN    L
Sbjct: 18  VSDRQIFGGNPTSMFDLNKIKYPWASKLWKTMLTNTWFPEEVSMHGD------KNHYLHL 71

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           +  E++   R L      +SL  NN++  I   +++PE    L+RQA+EEA+HSH++  +
Sbjct: 72  SPQEKIGYDRALAQLIFMDSLQTNNLIDNINPFITSPEINLCLVRQAYEEALHSHSYAVM 131

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHY 176
           + S+  +   ++ M+R   ++  K +   Q    LS+    Y
Sbjct: 132 VESISANSDSIYEMWRTDVALKNKNDCIAQIYMELSNNPTEY 173


>gi|66475262|ref|XP_627447.1| ribonucleotide reductase small subunit, duplicated adjacent gene
           [Cryptosporidium parvum Iowa II]
 gi|9652154|gb|AAF91416.1|AF275635_1 ribonucleotide reductase R2 subunit [Cryptosporidium parvum]
 gi|46228920|gb|EAK89769.1| ribonucleotide reductase small subunit, duplicated adjacent gene
           [Cryptosporidium parvum Iowa II]
          Length = 352

 Score = 65.1 bits (157), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 8/161 (4%)

Query: 12  AGEKRVNVDDKRMLN-ARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
             E ++N  ++ ML  +R + N+L  L     W  Y  A  + W+  E+ +  D   W+S
Sbjct: 24  VNEVKINQVNEPMLKYSRENRNELKELIKD-IWSMYKKAEASFWVTEEIDLSQDTRDWES 82

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              L D ER  IK  L FFA+S+ +V  N+ +   R +  PE R Y   Q   E +HS T
Sbjct: 83  ---LKDPERHFIKYVLAFFAASDGIVMENLAVNFLREIQIPEARMYYAFQMSIEQIHSET 139

Query: 131 FQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQT 168
           +  +I     +  E   LF     + ++  KA WA ++  +
Sbjct: 140 YSLLIDRYITEIKERQMLFEAISHIEAVKKKAEWATKWMNS 180


>gi|326916502|ref|XP_003204546.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Meleagris gallopavo]
          Length = 339

 Score = 65.1 bits (157), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 6/134 (4%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
            P++Y   W  Y  A  + W   EV +  DL  W+S   L  +E+  I   L FFA+S+ 
Sbjct: 33  FPIQYHDIWRMYKKAEASFWTAEEVDLSKDLQHWES---LKPEEKYFISHVLAFFAASDG 89

Query: 95  LVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYRE 151
           +V  N+V    + +   E R +   Q   E +HS  +  +I +   D  E   LFN    
Sbjct: 90  IVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREFLFNAIET 149

Query: 152 VPSITAKANWALQY 165
           +P +  KA+WA+++
Sbjct: 150 LPCVKKKADWAIRW 163


>gi|158286793|ref|XP_308927.4| AGAP006818-PA [Anopheles gambiae str. PEST]
 gi|157020637|gb|EAA04227.4| AGAP006818-PA [Anopheles gambiae str. PEST]
          Length = 400

 Score = 65.1 bits (157), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 6/138 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W+ Y  A  + W   EV +  D+  W++   L   ER  I   L FFA+S+
Sbjct: 93  IFPIQYPDIWQMYKKAEASFWTVEEVDLSKDMKDWET---LKPSERHFISHVLAFFAASD 149

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +   E R +   Q   E VHS  +  +I +   D  E   LFN   
Sbjct: 150 GIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDSKEREFLFNAIE 209

Query: 151 EVPSITAKANWALQYTQT 168
            +P +  KA+WAL +  +
Sbjct: 210 TLPCVKRKADWALNWISS 227


>gi|312130971|ref|YP_003998311.1| ribonucleoside-diphosphate reductase [Leadbetterella byssophila DSM
           17132]
 gi|311907517|gb|ADQ17958.1| Ribonucleoside-diphosphate reductase [Leadbetterella byssophila DSM
           17132]
          Length = 328

 Score = 65.1 bits (157), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 6/137 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+K+   WE Y  A  + W   E+ +  D   W S   L D ER  I   L FFA+S+
Sbjct: 22  IFPIKHNDIWEFYKKAEASFWTAEELDLSQDHKDWAS---LNDGERHFISHVLAFFAASD 78

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+ +    ++   E + +   Q   E +H+ T+  +I +   D  E   + N   
Sbjct: 79  GIVNENLAVGFLSNVQYAEAKCFYGFQIMIENIHAETYSLLIDTYIKDTTERQRMLNAIE 138

Query: 151 EVPSITAKANWALQYTQ 167
            +P +  KA+WA+++ +
Sbjct: 139 TIPCVKKKADWAIRWIE 155


>gi|198420293|ref|XP_002130242.1| PREDICTED: similar to Ribonucleoside-diphosphate reductase subunit
           M2 (Ribonucleotide reductase small subunit)
           (Ribonucleotide reductase small chain) [Ciona
           intestinalis]
          Length = 393

 Score = 65.1 bits (157), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W+ Y  A  + W   EV +  D+  W++   L  +ER  I   L FFA+S+
Sbjct: 86  IFPIQYHDIWQMYKKAEASFWTVEEVDLSKDMVHWEA---LKPNERKFISHVLAFFAASD 142

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 143 GIVNENLVERFAQEVQITEARFFYGFQIAIENIHSEMYSLLINTYIRDTHEREFLFNAIE 202

Query: 151 EVPSITAKANWALQY 165
            +P +  KA WAL++
Sbjct: 203 TLPCVRKKAEWALKW 217


>gi|154250961|ref|YP_001411785.1| ribonucleotide-diphosphate reductase subunit beta [Parvibaculum
           lavamentivorans DS-1]
 gi|154154911|gb|ABS62128.1| Ribonucleoside-diphosphate reductase [Parvibaculum lavamentivorans
           DS-1]
          Length = 319

 Score = 64.7 bits (156), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 6/111 (5%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA+E +L+    HW+P EVP+ DD+  W  K  LT+ ER ++ +   FF  ++  
Sbjct: 12  PFRYPWAYEAWLTQQRIHWLPEEVPLADDVKDWSKK--LTEGERNLLTQIFRFFVQADVE 69

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFE--EAVHSHTFQYIITSLGLDEGE 144
           V NN  +  Y  +  P   Q +L  AF   E VH   + +++ ++G+ E E
Sbjct: 70  V-NNCYMKHYSRVFKPTEVQMML-AAFSNIETVHISAYSHLLDTIGMPEAE 118


>gi|149392653|gb|ABR26129.1| ribonucleoside-diphosphate reductase small chain [Oryza sativa
           Indica Group]
          Length = 233

 Score = 64.7 bits (156), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 5/137 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   WE Y  A  + W   EV +  D   W +   L+ DER  +   L FFA+S+
Sbjct: 1   MFPIRYPQIWEFYKKAVASFWTAEEVDLSADARHWDA--ALSPDERHFVSHVLAFFAASD 58

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +   E R +   Q   E +HS  +  ++ +   D+ E   LF    
Sbjct: 59  GIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIRDDVEKDRLFRAID 118

Query: 151 EVPSITAKANWALQYTQ 167
            VP++  KA+WA+++  
Sbjct: 119 TVPAVRRKADWAMRWID 135


>gi|110763195|ref|XP_397443.3| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 isoform
           1 [Apis mellifera]
          Length = 384

 Score = 64.7 bits (156), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 75/168 (44%), Gaps = 6/168 (3%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           + N   +  +   E + N + + +L        + P+++   W+ Y  A  + W   EV 
Sbjct: 44  VINTKAIQNMYLKENKFNPELEPLLKENPRRFVVFPIQWPDIWQMYKKAEASFWTVEEVD 103

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           +  D+  W   N LT  E+  I   L FFA+S+ +V  N+V    + +   E R +   Q
Sbjct: 104 LSKDVFDW---NNLTASEKHFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQ 160

Query: 121 AFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
              E VHS  +  +I +   D  E   LFN    +P +  KA+WAL +
Sbjct: 161 VAMENVHSEMYSLLIDTYIADAKERDFLFNAIENLPCVAKKAHWALNW 208


>gi|62637405|ref|YP_227403.1| Ribonucleotide reductase small subunit [Deerpox virus W-848-83]
 gi|115503265|gb|ABI99183.1| ribonucleotide reductase small subunit [Deerpox virus W-848-83]
          Length = 321

 Score = 64.7 bits (156), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 58/132 (43%), Gaps = 6/132 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+ Y   W  Y  A  + W   EV +  DL  WK    LTD+ER  IK  L FFA+S+
Sbjct: 14  IFPIIYNDIWIMYKKAIASFWTTEEVDLSKDLLDWKK---LTDNERYFIKNILAFFAASD 70

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+    Y  +   E R +   Q   E +HS  +  +I +   D  E   L     
Sbjct: 71  GIVNENLAQRFYSEVQCSEARCFYGFQIAIENIHSEMYSLLIDTYITDVDEKNHLLKAID 130

Query: 151 EVPSITAKANWA 162
            +  I  KA WA
Sbjct: 131 TIDCIKEKAKWA 142


>gi|303389600|ref|XP_003073032.1| ribonucleoside-diphosphate reductase small subunit [Encephalitozoon
           intestinalis ATCC 50506]
 gi|303302176|gb|ADM11672.1| ribonucleoside-diphosphate reductase small subunit [Encephalitozoon
           intestinalis ATCC 50506]
          Length = 326

 Score = 64.7 bits (156), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 79/175 (45%), Gaps = 20/175 (11%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +L+ + +   L P+++   W  Y  A ++ W   EV +  D+  WK    L   E+  I 
Sbjct: 10  LLDPKEERFVLFPIQHEDVWRMYKKAESSFWTVEEVLLDKDIEDWKK---LNPKEKHFIS 66

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
             L FFA+S+ +V  N+V      +   E + +   Q   E +HS  +  +I +   D G
Sbjct: 67  NVLAFFAASDGIVNLNLVERFSSEVKMLEAKLFYGFQIAIENIHSEMYSLLIDTYVRD-G 125

Query: 144 E----LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           E    LFN  + +PS+  KA+WA++            W + + S   TR + F C
Sbjct: 126 EQKKFLFNAVKTIPSVKDKADWAIK------------WIEDKNSDFATRLVAFAC 168


>gi|312381384|gb|EFR27142.1| hypothetical protein AND_06323 [Anopheles darlingi]
          Length = 390

 Score = 64.7 bits (156), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 6/138 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W+ Y  A  + W   EV +  D+  W S   L   ER  I   L FFA+S+
Sbjct: 83  IFPIQYPDIWQMYKKAEASFWTVEEVDLSKDMKDWDS---LKPSERHFISHVLAFFAASD 139

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +   E R +   Q   E VHS  +  +I +   D  E   LFN   
Sbjct: 140 GIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAIE 199

Query: 151 EVPSITAKANWALQYTQT 168
            +P +  KA+WA+ +  +
Sbjct: 200 TLPCVKRKADWAMNWISS 217


>gi|19113338|ref|NP_596546.1| ribonucleotide reductase small subunit Suc22 [Schizosaccharomyces
           pombe 972h-]
 gi|9297110|sp|P36603|RIR2_SCHPO RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|3378511|emb|CAA20100.1| ribonucleotide reductase small subunit Suc22 [Schizosaccharomyces
           pombe]
          Length = 391

 Score = 64.7 bits (156), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 5/135 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W+ Y  A  + W   E+ +  DL  W +K  L  DER  I   L +FA+S+
Sbjct: 78  LFPIKYHEIWQFYKKAEASFWTAEEIDLSKDLVDWDNK--LNADERYFISTVLAYFAASD 135

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL---FNMYR 150
            +V  N++      +  PE R     Q   E +HS T+  ++ +   +  E    F+   
Sbjct: 136 GIVNENLLERFSSEVQIPEARCVYGFQIMIENIHSETYSLLLDTYIREPKEKQRHFDAIL 195

Query: 151 EVPSITAKANWALQY 165
            + SI AKA WAL++
Sbjct: 196 TMGSIKAKAKWALRW 210


>gi|211956300|ref|YP_002302368.1| ribonucleotide reductase small subunit [Deerpox virus W-1170-84]
 gi|115503095|gb|ABI99013.1| ribonucleotide reductase small subunit [Deerpox virus W-1170-84]
          Length = 321

 Score = 64.7 bits (156), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 6/132 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+ Y   W  Y  A  + W   EV +  DL  WK    LTD+ER  IK  L FFA+S+
Sbjct: 14  IFPIVYNDIWIMYKKAVASFWTTEEVDLSKDLLDWKK---LTDNERYFIKNILAFFAASD 70

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVP 153
            +V  N+    Y  +   E R +   Q   E +HS  +  +I +   D  E  ++ + + 
Sbjct: 71  GIVNENLAQRFYSEVQCSEARCFYGFQIAIENIHSEMYSLLIDTYITDVDEKNHLLKAID 130

Query: 154 SITA---KANWA 162
           +I     KA WA
Sbjct: 131 TIDCVKEKAKWA 142


>gi|19881429|ref|NP_612246.1| putative ribonucleotide reductase small subunit [Infectious spleen
           and kidney necrosis virus]
 gi|19773634|gb|AAL98748.1|AF371960_24 putative ribonucleotide reductase small subunit [infectious spleen
           and kidney necrosis virus]
          Length = 312

 Score = 64.7 bits (156), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 5/126 (3%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           W  Y  A  + W   EV +  D+  W  K  LT+ ER  +   L FFA ++ +V +N+V 
Sbjct: 14  WAMYKKAVASFWTVEEVDLSTDVRHWTEK--LTEAERRFMSHILAFFAMADGIVGDNLVC 71

Query: 103 AIYRHLSN-PECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE--LFNMYREVPSITAKA 159
              + L   PE R +   Q   E +H+  +  +I +L   E +  LF+   ++P + AKA
Sbjct: 72  NFAKELDYIPEARAFYGFQVAMENIHAEMYTQLIITLVAKENQAALFSAAEDMPCVKAKA 131

Query: 160 NWALQY 165
            WA Q+
Sbjct: 132 QWAAQW 137


>gi|297449|emb|CAA46231.1| ribonucleotide reductase, small subunit [Schizosaccharomyces pombe]
 gi|447147|prf||1913428B ribonucleotide reductase:SUBUNIT=small
          Length = 391

 Score = 64.7 bits (156), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 5/135 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   W+ Y  A  + W   E+ +  DL  W +K  L  DER  I   L +FA+S+
Sbjct: 78  LFPIKYHEIWQFYKKAEASFWTAEEIDLSKDLVDWDNK--LNADERYFISTVLAYFAASD 135

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL---FNMYR 150
            +V  N++      +  PE R     Q   E +HS T+  ++ +   +  E    F+   
Sbjct: 136 GIVNENLLERFSSEVQIPEARCVYGFQIMIENIHSETYSLLLDTYIREPKEKQRHFDAIL 195

Query: 151 EVPSITAKANWALQY 165
            + SI AKA WAL++
Sbjct: 196 TMGSIKAKAKWALRW 210


>gi|170032272|ref|XP_001844006.1| ribonucleoside-diphosphate reductase small chain [Culex
           quinquefasciatus]
 gi|167872122|gb|EDS35505.1| ribonucleoside-diphosphate reductase small chain [Culex
           quinquefasciatus]
          Length = 391

 Score = 64.3 bits (155), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 6/138 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W+ Y  A  + W   EV +  DL  W+    L   E+  I   L FFA+S+
Sbjct: 84  IFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLGDWEK---LKSGEKHFISHVLAFFAASD 140

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +   E R +   Q   E VHS  +  +I +   D  E   LFN   
Sbjct: 141 GIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKEREYLFNAIE 200

Query: 151 EVPSITAKANWALQYTQT 168
            +P +  KA+WA+ +  +
Sbjct: 201 TLPCVKKKADWAMNWISS 218


>gi|40556174|ref|NP_955259.1| CNPV236 ribonucleotide reductase small subunit [Canarypox virus]
 gi|40233999|gb|AAR83582.1| CNPV236 ribonucleotide reductase small subunit [Canarypox virus]
          Length = 323

 Score = 64.3 bits (155), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+++G  W  Y  A  + W   EV +  DL  WK+   L  +ER  I   L FFA S+
Sbjct: 16  IFPIQHGDIWRMYKQAVASFWTVEEVDLSYDLIDWKN---LKPEERRFISYILAFFAVSD 72

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +  PE R +   Q   E +HS  +  +I +   D  E   LF+  R
Sbjct: 73  GIVNENLVEKFCQEVQIPEARCFYGFQIAIENIHSEMYSLLIDTYIDDNNEKKRLFSSMR 132

Query: 151 EVPSITAKANWALQY 165
            +  +  K+ WAL++
Sbjct: 133 TMDCVRKKSEWALKW 147


>gi|242012701|ref|XP_002427066.1| Ribonucleoside-diphosphate reductase M2 subunit, putative
           [Pediculus humanus corporis]
 gi|212511324|gb|EEB14328.1| Ribonucleoside-diphosphate reductase M2 subunit, putative
           [Pediculus humanus corporis]
          Length = 304

 Score = 64.3 bits (155), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 14/162 (8%)

Query: 15  KRVNVDDKRMLNA------RSDVNQ--LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           + +NV+D R+ N       + ++ +  + P+++   W  Y  A  + W   EV +  DL 
Sbjct: 17  QNINVNDSRVFNKEIEPLLKENIKRFVIFPIEFPDIWHMYKKAEASFWTVEEVDLSKDLE 76

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            W+    L   ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E V
Sbjct: 77  HWER---LKPSERHFISHVLAFFAASDGIVNENLVERFSQEVQVSEARCFYGFQIAMENV 133

Query: 127 HSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
           HS  +  +I +   +  E   LFN    +P +  KA+WAL++
Sbjct: 134 HSEMYSLLIDTYIKNPTEKHFLFNAIETMPCVKKKADWALKW 175


>gi|312075738|ref|XP_003140550.1| ribonucleotide reductase M2 B [Loa loa]
 gi|307764288|gb|EFO23522.1| ribonucleotide reductase M2 B [Loa loa]
          Length = 350

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 64/139 (46%), Gaps = 15/139 (10%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+K+   W+ Y  A  + W   EV +  D   W++   L D ER  I R L FFA+S+
Sbjct: 58  IFPIKFHDIWDFYKKALASFWTVDEVDLSKDYRDWEN---LNDGERHFISRVLAFFAASD 114

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVP 153
            +V  N+V    + +  PE R +   Q   E VHS        SL      LFN   E  
Sbjct: 115 GIVNENLVNRFSQEVQVPEARFFYGFQIMIENVHSE------MSL------LFNAIYEFE 162

Query: 154 SITAKANWALQYTQTLSSP 172
            +  KA+WAL +   + +P
Sbjct: 163 FVKKKADWALCWIADIKAP 181


>gi|323098642|gb|ADX22879.1| ribonucleotide reductase small subunit [Monkeypox virus]
          Length = 319

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 60/132 (45%), Gaps = 6/132 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W  Y  A  + W   EV +  D+  W   N LT DE+  IK  L FF +S+
Sbjct: 14  IFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPDEKYFIKHVLAFFXASD 70

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 71  GIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNYLFNAIE 130

Query: 151 EVPSITAKANWA 162
            +P +  KA+WA
Sbjct: 131 TMPCVKKKADWA 142


>gi|16124515|ref|NP_419079.1| ribonucleotide-diphosphate reductase subunit beta [Caulobacter
           crescentus CB15]
 gi|221233200|ref|YP_002515636.1| ribonucleotide-diphosphate reductase subunit beta [Caulobacter
           crescentus NA1000]
 gi|13421393|gb|AAK22247.1| ribonucleoside-diphosphate reductase, beta subunit [Caulobacter
           crescentus CB15]
 gi|220962372|gb|ACL93728.1| ribonucleoside-diphosphate reductase beta chain [Caulobacter
           crescentus NA1000]
          Length = 347

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 7/138 (5%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA++ +      HWMP EVP+ +DL  W  K  L D ER ++ +   FF  S+  
Sbjct: 21  PFRYPWAYDFWKKQQQVHWMPEEVPLGEDLKDWAVK--LNDKERNLLTQIFRFFTQSDVE 78

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V +N +    R     E +  L   A  E +H   +  ++ ++G+ E E F+ + E  ++
Sbjct: 79  VQDNYMERYGRVFKPTEVKMMLASFANMETIHIAAYALLLETIGMPETE-FSAFMEYEAM 137

Query: 156 TAKANWALQYTQTLSSPS 173
            AK +    Y QT    S
Sbjct: 138 KAKHD----YMQTFGVDS 151


>gi|323098445|gb|ADX22683.1| ribonucleotide reductase small subunit [Monkeypox virus]
          Length = 319

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 60/132 (45%), Gaps = 6/132 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W  Y  A  + W   EV +  D+  W   N LT DE+  IK  L FF +S+
Sbjct: 14  IFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPDEKYFIKHVLAFFXASD 70

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 71  GIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNYLFNAIE 130

Query: 151 EVPSITAKANWA 162
            +P +  KA+WA
Sbjct: 131 TMPCVKKKADWA 142


>gi|187903099|ref|YP_001883390.1| ribonucleoside diphosphate reductase small subunit, rr2 [Musca
           domestica salivary gland hypertrophy virus]
 gi|187384748|gb|ACD03521.1| ribonucleoside diphosphate reductase small subunit, rr2 [Musca
           domestica salivary gland hypertrophy virus]
          Length = 343

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 6/141 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   W  Y  A  + W   EV +  D+  W+    L+  E+  IK  L FFA+S+
Sbjct: 29  LFPIEYEDIWRMYKKAEASFWTVEEVDLSKDMNDWER---LSSGEQHFIKHVLAFFAASD 85

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N++    + +   E R +   Q   E VHS  +  +I +   +  E   LFN   
Sbjct: 86  GIVNENLLERFAQEVQVSEARCFYGFQIAMENVHSEMYSVLIDTYIRERAERERLFNAIE 145

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +P++  KA+WA  +  + ++
Sbjct: 146 TIPAVKRKADWAFNWITSTTA 166


>gi|18640273|ref|NP_570429.1| CMLV039 [Camelpox virus]
 gi|18482949|gb|AAL73746.1|AF438165_36 ribonucleotide reductase small subunit [Camelpox virus M-96]
 gi|19717972|gb|AAG37497.1| CMP39L [Camelpox virus CMS]
          Length = 319

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 6/132 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W  Y  A  + W   EV +  D+  W   N LT +E+  IK  L FFA+S+
Sbjct: 14  IFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPNEKYFIKHVLAFFAASD 70

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 71  GIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNYLFNAIE 130

Query: 151 EVPSITAKANWA 162
            +P +  KA+WA
Sbjct: 131 TMPCVKKKADWA 142


>gi|20178418|ref|NP_619839.1| CPXV051 protein [Cowpox virus]
 gi|20153036|gb|AAM13497.1|AF482758_48 CPXV051 protein [Cowpox virus]
          Length = 333

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 6/141 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W  Y  A  + W   EV +  D+  W   N LT +E+  IK  L FFA+S+
Sbjct: 28  IFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPNEKHFIKHVLAFFAASD 84

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +   E R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 85  GIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNEKNYLFNAIE 144

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +P +  KA+WA ++    +S
Sbjct: 145 TMPCVKKKADWAQKWIHDSAS 165


>gi|256081213|ref|XP_002576867.1| ribonucleoside-diphosphate reductase small chain [Schistosoma
           mansoni]
 gi|238662153|emb|CAZ33104.1| ribonucleoside-diphosphate reductase small chain, putative
           [Schistosoma mansoni]
          Length = 365

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   W  Y  A  + W   EV +  D   W+S   L   ER  I   L FFA+S+
Sbjct: 55  LFPIEYHDVWHFYKKAVASFWTVEEVDLSKDFIHWES---LKVGERHFISYVLAFFAASD 111

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N++    + +  PE R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 112 GIVLENLLERFSQEVQIPEVRCFYGMQIAIENIHSEMYSLLIDTYIKDSKERDFLFNAIS 171

Query: 151 EVPSITAKANWALQY 165
            +  +  KA WAL +
Sbjct: 172 NLTCVAKKAQWALDW 186


>gi|323452425|gb|EGB08299.1| hypothetical protein AURANDRAFT_59025 [Aureococcus anophagefferens]
          Length = 319

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 5/136 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+++   W+ Y  A  + W   EV +  D+  W +K  L D ER  IK  L FFA+S+
Sbjct: 11  LFPIEHDDIWQMYKQAEASFWTAEEVDLCHDVQHWDTK--LNDKERHFIKHVLAFFAASD 68

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD---EGELFNMYR 150
            +V  N+       +  PE R +   Q   E +HS  +  +I +   D   + E      
Sbjct: 69  GIVNENLAQNFATEVQWPEARCFYGFQIAIENIHSEVYSLLIDTYIRDAQKKHECLTAID 128

Query: 151 EVPSITAKANWALQYT 166
            +P +  KA WAL++ 
Sbjct: 129 TMPCVAEKAQWALRWC 144


>gi|224007863|ref|XP_002292891.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220971753|gb|EED90087.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 297

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 6/126 (4%)

Query: 46  YLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIY 105
           Y  A  + W   E+ + +DL  W   + LT +ER  +   L FFA+S+ +V  N+     
Sbjct: 2   YKKAEASFWTAEEIDLAEDLKDW---DALTANERHFVSHILAFFAASDGIVNENLTGNFS 58

Query: 106 RHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWA 162
             +++PE R +   Q   E +HS T+  +I +   D  E   L N    VP +  KA+WA
Sbjct: 59  TEVTSPEARCFYGFQIAVENIHSETYSLLIDTYIKDSTEKNHLLNAIETVPCVQKKAHWA 118

Query: 163 LQYTQT 168
           L++   
Sbjct: 119 LKWCDA 124


>gi|269865926|ref|XP_002652096.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063168|gb|EED41960.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 330

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 6/141 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   WE Y    +  W   EV M  D   + +   LT +E+  IK  L FFA+S+
Sbjct: 38  IFPIQYPEIWEVYKMHESTFWTVEEVDMTFDCEHFST---LTPNEQFFIKYVLAFFAASD 94

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +   E + +   Q   E +HS  +  +I +L  D+ E   LFN   
Sbjct: 95  GIVNENLVERFSSEVQILEAKMFYGFQIAIENIHSEMYSKLIETLIRDKEEQTYLFNAIE 154

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +PSI  KA WA ++  + +S
Sbjct: 155 NIPSIRKKALWAQKWIASDTS 175


>gi|266919|sp|P29883|RIR2_VACCP RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|335710|gb|AAA48294.1| F14 [Vaccinia virus]
          Length = 319

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 62/133 (46%), Gaps = 8/133 (6%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W  Y  A  + W   EV +  D+  W   N +T DE+  IK  L FFA+S+
Sbjct: 14  IFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKVTPDEKYFIKHVLAFFAASD 70

Query: 94  SLVANNIVLAIYRHLSNPECRQ-YLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMY 149
            +V  N+       +   E R  Y  R A E  +HS  +  +I +   D  E   LFN  
Sbjct: 71  GIVNENLAERFCTEVQITEARCFYGFRMAIEN-IHSEMYSLLIDTYVKDSNEKNYLFNAI 129

Query: 150 REVPSITAKANWA 162
             +P +  KA+WA
Sbjct: 130 ETMPCVKKKADWA 142


>gi|67585619|ref|XP_665115.1| ribonucleotide reductase R2 subunit [Cryptosporidium hominis TU502]
 gi|54655552|gb|EAL34885.1| ribonucleotide reductase R2 subunit [Cryptosporidium hominis]
          Length = 296

 Score = 63.2 bits (152), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 6/126 (4%)

Query: 46  YLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIY 105
           Y  A  + W+  E+ +  D   W+S   L D ER  IK  L FFA+S+ +V  N+ +   
Sbjct: 2   YKKAEASFWVTEEIDLSQDTRDWES---LKDPERHFIKYVLAFFAASDGIVMENLAVNFL 58

Query: 106 RHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWA 162
           R +  PE R Y   Q   E +HS T+  +I     D  E   LF     + ++  KA WA
Sbjct: 59  REIQIPEARMYYAFQMSIEQIHSETYSLLIDRYITDIKERQMLFEAISHIEAVKKKAEWA 118

Query: 163 LQYTQT 168
            ++  +
Sbjct: 119 TKWMNS 124


>gi|76163066|gb|AAX30834.2| SJCHGC08068 protein [Schistosoma japonicum]
          Length = 230

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   W  Y  A  + W   EV +  D   W+S   L   ER  I   L FFA+S+
Sbjct: 52  LFPIEYHDIWHFYKKAVASFWTVEEVDLSKDFTHWES---LKVGERHFISYVLAFFAASD 108

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N++    + +  PE R +   Q   E +HS  +  +I +   D  E   LFN   
Sbjct: 109 GIVLENLLERFSQEVQIPEVRCFYGMQIAIENIHSEMYSLLIDTYIKDSKERDFLFNAIS 168

Query: 151 EVPSITAKANWALQY 165
            +  +  KA WAL +
Sbjct: 169 NLTCVAKKAQWALDW 183


>gi|313768143|ref|YP_004061574.1| hypothetical protein BpV1_144c [Bathycoccus sp. RCC1105 virus BpV1]
 gi|312599750|gb|ADQ91771.1| hypothetical protein BpV1_144c [Bathycoccus sp. RCC1105 virus BpV1]
          Length = 387

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+++   W  Y  A  ++W   E+    D+  W   N L+D+E+  IK  L FFA S+
Sbjct: 85  VFPIEHENLWTLYKKAQMSNWTAEEIDFSKDMDDW---NELSDNEKHFIKYILAFFAGSD 141

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL---GLDEGELFNMYR 150
            +V  NI       +   E R +   Q+  E VH  T+  +I        ++ +LF   +
Sbjct: 142 GIVFENINNNFADEIQLTEARSFYAYQSHNEMVHGETYSKLIDKYIKNSSEKKQLFEAIQ 201

Query: 151 EVPSITAKANWALQY 165
            +P I  KA WA+++
Sbjct: 202 TIPCIERKAKWAMKW 216


>gi|313675915|ref|YP_004053911.1| ribonucleoside-diphosphate reductase [Marivirga tractuosa DSM 4126]
 gi|312942613|gb|ADR21803.1| Ribonucleoside-diphosphate reductase [Marivirga tractuosa DSM 4126]
          Length = 331

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 6/148 (4%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           D+ +L    D   L P+++   WE Y  A  + W   E+ +  D   W++   LT+ E  
Sbjct: 9   DEPILKENKDRFVLFPIQHKDIWEFYKMAEASFWTAEEIDLSQDQKDWEN---LTEGETH 65

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            IK  L FFA+S+ +V  N+       +   E + +   Q   E VHS T+  +I +   
Sbjct: 66  FIKHVLAFFAASDGIVNENLAENFVAEVQYTEAKFFYGFQIAMENVHSETYSLLIDTYVK 125

Query: 141 DEGE---LFNMYREVPSITAKANWALQY 165
           D  E   LFN    +  +  KA+WAL++
Sbjct: 126 DNKEKDKLFNAIDTMDCVKKKADWALRW 153


>gi|148676854|gb|EDL08801.1| ribonucleotide reductase M2 B (TP53 inducible) [Mus musculus]
          Length = 297

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 6/123 (4%)

Query: 46  YLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIY 105
           Y  A  + W   EV +  DL  W   N L  DE+  I   L FFA+S+ +V  N+V    
Sbjct: 2   YKQAQASFWTAEEVDLSKDLPHW---NKLKSDEKYFISHILAFFAASDGIVNENLVERFS 58

Query: 106 RHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWA 162
           + +  PE R +   Q   E VHS  +  +I +   D  +   LFN    +P +  KA+WA
Sbjct: 59  QEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWA 118

Query: 163 LQY 165
           L++
Sbjct: 119 LRW 121


>gi|269865568|ref|XP_002651969.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063399|gb|EED42087.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 251

 Score = 62.8 bits (151), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 6/141 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   WE Y    +  W   EV M  D   + +   LT +E+  IK  L FFA+S+
Sbjct: 38  IFPIQYPEIWEFYKMHESTFWTVEEVDMTFDCEHFST---LTPNEQFFIKYVLAFFAASD 94

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +   E + +   Q   E +HS  +  +I +L  D+ E   LFN   
Sbjct: 95  GIVNENLVERFSSEVQILEAKMFYGFQIAIENIHSEMYSKLIETLIRDKEEQTYLFNAIE 154

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +PSI  KA WA ++  + +S
Sbjct: 155 NIPSIRKKALWAQKWIASDTS 175


>gi|131840053|ref|YP_001096062.1| ORF23 [Cyprinid herpesvirus 3]
 gi|84181618|gb|ABC55221.1| hypothetical protein [Cyprinid herpesvirus 3]
 gi|109706628|gb|ABG42854.1| ORF23 [Cyprinid herpesvirus 3]
 gi|129560539|dbj|BAF48834.1| ribonucleotide reductase small chain [Cyprinid herpesvirus 3]
          Length = 335

 Score = 62.8 bits (151), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 6/129 (4%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           W  Y  A  ++W   E+ +  D A W+S   L+++E+  +K  L FFA+S+ +V  N+  
Sbjct: 35  WSMYKKAQFSNWTAEEIDLAKDTAGWES---LSENEKFFLKNILAFFAASDGIVNENLAT 91

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKA 159
              + +   E R +   Q   E VHS  +  ++ +  LD  E   LF     +P I  KA
Sbjct: 92  RFMKEVQYFEARCFYGFQIAIENVHSEVYAKLLNTYILDPVERNGLFKAMETMPCIKKKA 151

Query: 160 NWALQYTQT 168
           +WAL + ++
Sbjct: 152 DWALNWIES 160


>gi|74229799|ref|YP_309003.1| ribonucleotide reductase small subunit (rr2) [Trichoplusia ni SNPV]
 gi|72259713|gb|AAZ67484.1| ribonucleotide reductase small subunit (rr2) [Trichoplusia ni SNPV]
          Length = 318

 Score = 62.8 bits (151), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 5/141 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+     W+ Y  A + HW   E+ M  D   W +K  L D ER  +K  L FFA+++
Sbjct: 9   LFPIVNEDLWQSYKKALDCHWKVEEIDMSKDFDDWNNK--LNDKERFFLKHVLAFFAAAD 66

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  NI+  +   +   E   +  +Q   E VH+  +  ++     D  E   + N   
Sbjct: 67  VIVNTNIIEHMQSAVPEMEASFFYAQQTSIECVHTEMYNILVVEYIKDPQECDRILNAIE 126

Query: 151 EVPSITAKANWALQYTQTLSS 171
            + S+  KA WA ++ ++ ++
Sbjct: 127 HIDSVKRKATWAQKWIESQTA 147


>gi|110802082|ref|YP_699620.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           perfringens SM101]
 gi|110682583|gb|ABG85953.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens SM101]
          Length = 344

 Score = 62.8 bits (151), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 35/209 (16%)

Query: 17  VNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           +  + K+M+N  + ++N    +KY W  E Y  A NN W+P E+ +  DL  +K    LT
Sbjct: 15  IETNKKKMINGNTTNLNDFNNMKYTWVSEWYRQAMNNFWIPEEINLAQDLKDYKK---LT 71

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
            +E+    + L F    +S+   N+   I  +++  E    L  QAF+EAVHS ++ Y++
Sbjct: 72  KEEKAAYDKILSFLIFLDSIQTANLG-NINSYITASEVNLCLTIQAFQEAVHSQSYSYML 130

Query: 136 TSLGLDE----------------------GELFNMYREVPSI-----TAKANWALQYTQT 168
            S+   E                      G+L+N + E  SI     +  AN+ L+    
Sbjct: 131 DSICSPEERNEILFQWKDDAILLQRNKFIGDLYNNFLEDSSIENFIKSVMANYILEGVYF 190

Query: 169 LSSPSFHYWNKRRRSRI--LTRSLRFLCR 195
            S   F Y N  R  ++    + +R++ R
Sbjct: 191 YSGFMFFY-NLERNGKMPGSAQEIRYINR 218


>gi|269865675|ref|XP_002652006.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063328|gb|EED42049.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 183

 Score = 62.8 bits (151), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 6/141 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   WE Y    +  W   EV M  D   + +   LT +E+  IK  L FFA+S+
Sbjct: 38  IFPIQYPEIWEFYKMHESTFWTVEEVDMTFDCEHFST---LTPNEQFFIKYVLAFFAASD 94

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +   E + +   Q   E +HS  +  +I +L  D+ E   LFN   
Sbjct: 95  GIVNENLVERFSSEVQILEAKMFYGFQIAIENIHSEMYSKLIETLIRDKEEQTYLFNAIE 154

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +PSI  KA WA ++  + +S
Sbjct: 155 NIPSIRKKALWAQKWIASDTS 175


>gi|18311342|ref|NP_563276.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           perfringens str. 13]
 gi|110801267|ref|YP_697050.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           perfringens ATCC 13124]
 gi|168205189|ref|ZP_02631194.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens E str. JGS1987]
 gi|168210336|ref|ZP_02635961.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens B str. ATCC 3626]
 gi|168213271|ref|ZP_02638896.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens CPE str. F4969]
 gi|168216675|ref|ZP_02642300.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens NCTC 8239]
 gi|169347055|ref|ZP_02865997.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens C str. JGS1495]
 gi|182625797|ref|ZP_02953564.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens D str. JGS1721]
 gi|18146026|dbj|BAB82066.1| ribonucleoside-diphosphate reductase beta subunit [Clostridium
           perfringens str. 13]
 gi|110675914|gb|ABG84901.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens ATCC 13124]
 gi|169296738|gb|EDS78867.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens C str. JGS1495]
 gi|170663363|gb|EDT16046.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens E str. JGS1987]
 gi|170711548|gb|EDT23730.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens B str. ATCC 3626]
 gi|170715235|gb|EDT27417.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens CPE str. F4969]
 gi|177908953|gb|EDT71440.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens D str. JGS1721]
 gi|182381151|gb|EDT78630.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens NCTC 8239]
          Length = 344

 Score = 62.8 bits (151), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 65/123 (52%), Gaps = 5/123 (4%)

Query: 17  VNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           +  + K+M+N  + ++N    +KY W  E Y  A NN W+P E+ +  DL  +K    LT
Sbjct: 15  IETNKKKMINGNTTNLNDFNNMKYTWVSEWYRQAMNNFWIPEEINLAQDLKDYKK---LT 71

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
            +E+    + L F    +S+   N+   I  +++  E    L  QAF+EAVHS ++ Y++
Sbjct: 72  KEEKTAYDKILSFLIFLDSIQTANLG-NINSYITASEVNLCLTIQAFQEAVHSQSYSYML 130

Query: 136 TSL 138
            S+
Sbjct: 131 DSI 133


>gi|292397811|ref|YP_003517877.1| RR2b [Lymantria xylina MNPV]
 gi|291065528|gb|ADD73846.1| RR2b [Lymantria xylina MNPV]
          Length = 338

 Score = 62.8 bits (151), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 73/165 (44%), Gaps = 7/165 (4%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           L+P   GEK  +   + +L        + P++Y   W  Y  A  + W   EV +  D  
Sbjct: 6   LAPAD-GEKPFDPQAEPLLRENPRRFVIFPIQYSDMWSMYKKAEASFWTVEEVDLSKDTR 64

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            W+    L D+ER  IK  L FFA+S+ +V  N+V    + +   E R +   Q   E V
Sbjct: 65  DWER---LNDNERHFIKHVLAFFAASDGIVNENLVERFAQEVQVVEARCFYGFQIAMENV 121

Query: 127 HSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQT 168
           HS  +  +I +      E   L N    +P +  KA WAL++  +
Sbjct: 122 HSEMYSTLIDTYVRSSEEKLRLLNAIETMPCVKEKAEWALRWIAS 166


>gi|315497476|ref|YP_004086280.1| ribonucleoside-diphosphate reductase [Asticcacaulis excentricus CB
           48]
 gi|315415488|gb|ADU12129.1| Ribonucleoside-diphosphate reductase [Asticcacaulis excentricus CB
           48]
          Length = 350

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 3/130 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA++ +      HW+P EVP+ +D+  W SK  L D+ER ++ +   FF  S+  
Sbjct: 23  PFRYPWAFDFWQKQQQVHWLPEEVPLGEDVKDWASK--LNDNERNLLTQIFRFFTQSDIE 80

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V +N +    R     E +  L   A  E VH   +  ++ ++G+ E E F  + E  ++
Sbjct: 81  VQDNYMEKYGRVFKPTEIKMMLSAFANMETVHIAAYALLLETIGMPEAE-FGAFMEYEAM 139

Query: 156 TAKANWALQY 165
             K N+  ++
Sbjct: 140 RDKHNFMQKF 149


>gi|9631087|ref|NP_047757.1| ribonucleotide reductase small subunit homolog [Lymantria dispar
           MNPV]
 gi|3822355|gb|AAC70306.1| ribonucleotide reductase small subunit homolog [Lymantria dispar
           MNPV]
          Length = 348

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   W  Y  A  + W   EV +  D + W+    L D+ER  IK  L FFA+S+
Sbjct: 42  IFPIQYPDMWRMYKKAEASFWTVEEVDLSKDTSDWER---LNDNERHFIKHVLAFFAASD 98

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V    + +   E R +   Q   E VHS  +  +I +      E   L N   
Sbjct: 99  GIVNENLVERFAQEVQVAEARCFYGFQIAMENVHSEMYSTLIDTYVRSSEEKLRLLNAIE 158

Query: 151 EVPSITAKANWALQY 165
            +P +  KA WAL++
Sbjct: 159 TMPCVKEKAEWALRW 173


>gi|269863618|ref|XP_002651286.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220064807|gb|EED42770.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 332

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 6/141 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   WE Y    +  W   EV M  D   + +   LT +E+  IK  L FFA+S+
Sbjct: 38  IFPIQYPEIWEFYKMHESTFWTVEEVDMTFDCEHFST---LTPNEQFFIKYVLAFFAASD 94

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +   E + +   Q   E +HS  +  +I +L  D+ E   LFN   
Sbjct: 95  GIVNENLVERFSSEVQILEAKMFYGFQIAIENIHSEMYSKLIETLIRDKEEQTYLFNAIE 154

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +PSI  KA WA ++  + +S
Sbjct: 155 NIPSIRKKALWAQKWIASDTS 175


>gi|296116311|ref|ZP_06834927.1| ribonucleotide-diphosphate reductase subunit beta
           [Gluconacetobacter hansenii ATCC 23769]
 gi|295977130|gb|EFG83892.1| ribonucleotide-diphosphate reductase subunit beta
           [Gluconacetobacter hansenii ATCC 23769]
          Length = 334

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 8/121 (6%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA++ +L+    HW+P EVP+ DD+  W     LT+ ER ++ +   FF  S+  
Sbjct: 27  PFRYPWAYDAWLTQQQVHWLPEEVPLADDVKDW--HRSLTESERHLVTQIFRFFTQSDVE 84

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFE--EAVHSHTFQYIITSLGLDEGEL--FNMYRE 151
           V NN  +  Y  +  P     ++  AF   E +H   + +++ ++G+ E E   F  Y+E
Sbjct: 85  V-NNCYMKHYSQVFKP-TEVLMMLSAFSNIETIHIAAYSHLLDTIGMPESEYSAFLKYKE 142

Query: 152 V 152
           +
Sbjct: 143 M 143


>gi|114621164|ref|XP_001153859.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
 gi|119612248|gb|EAW91842.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_c [Homo
           sapiens]
 gi|194385642|dbj|BAG65196.1| unnamed protein product [Homo sapiens]
          Length = 297

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 6/123 (4%)

Query: 46  YLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIY 105
           Y  A  + W   EV +  DL  W   N L  DE+  I   L FFA+S+ +V  N+V    
Sbjct: 2   YKQAQASFWTAEEVDLSKDLPHW---NKLKADEKYFISHILAFFAASDGIVNENLVERFS 58

Query: 106 RHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWA 162
           + +  PE R +   Q   E VHS  +  +I +   D  +   LFN    +P +  KA+WA
Sbjct: 59  QEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWA 118

Query: 163 LQY 165
           L++
Sbjct: 119 LRW 121


>gi|168186576|ref|ZP_02621211.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum C str. Eklund]
 gi|169295422|gb|EDS77555.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum C str. Eklund]
          Length = 342

 Score = 62.4 bits (150), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 66/117 (56%), Gaps = 6/117 (5%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA E Y +  NN W+P E+ + +D+   K  + LTD ER    + + F    +S+ 
Sbjct: 32  IKYNWANELYRNMLNNFWIPEEISLNEDV---KQFSYLTDGERNAFDKIISFLNFLDSIQ 88

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELFNMYRE 151
           + N+   I R+++ PE    L  QAF+E +H+ ++ YI+ ++   +   ++++ +RE
Sbjct: 89  SENLP-NISRYITAPEVSSILNIQAFQEEIHAQSYSYILDTVTNPITRDKIYDQWRE 144


>gi|50949848|emb|CAH10473.1| hypothetical protein [Homo sapiens]
          Length = 297

 Score = 62.4 bits (150), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 6/123 (4%)

Query: 46  YLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIY 105
           Y  A  + W   EV +  DL  W   N L  DE+  I   L FFA+S+ +V  N+V    
Sbjct: 2   YKQAQASFWTAEEVDLSKDLPHW---NKLKADEKYFISHILAFFAASDGIVNENLVERFS 58

Query: 106 RHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWA 162
           + +  PE R +   Q   E VHS  +  +I +   D  +   LFN    +P +  KA+WA
Sbjct: 59  QEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWA 118

Query: 163 LQY 165
           L++
Sbjct: 119 LRW 121


>gi|269865122|ref|XP_002651812.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063829|gb|EED42244.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 336

 Score = 62.4 bits (150), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 6/141 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   WE Y    +  W   EV M  D   + +   LT +E+  IK  L FFA+S+
Sbjct: 38  IFPIQYPEIWEFYKMHESTFWTVEEVDMTFDCEHFST---LTPNEQFFIKYVLAFFAASD 94

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +   E + +   Q   E +HS  +  +I +L  D+ E   LFN   
Sbjct: 95  GIVNENLVERFSSEVQILEAKMFYGFQIAIENIHSEMYSKLIETLIRDKEEQTYLFNAIE 154

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +PSI  KA WA ++  + +S
Sbjct: 155 NIPSIRKKALWAQKWIASDTS 175


>gi|269862698|ref|XP_002650940.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220065381|gb|EED43116.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 332

 Score = 62.0 bits (149), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 6/141 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   WE Y    +  W   EV M  D   + +   LT +E+  IK  L FFA+S+
Sbjct: 66  IFPIQYPEIWEFYKMHESTFWTVEEVDMTFDCEHFST---LTPNEQFFIKYVLAFFAASD 122

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +   E + +   Q   E +HS  +  +I +L  D+ E   LFN   
Sbjct: 123 GIVNENLVERFSSEVQILEAKMFYGFQIAIENIHSEMYSKLIETLIRDKEEQTYLFNAIE 182

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +PSI  KA WA ++  + +S
Sbjct: 183 NIPSIRKKALWAQKWIASDTS 203


>gi|269867180|ref|XP_002652512.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220062330|gb|EED41544.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 196

 Score = 62.0 bits (149), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 6/141 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   WE Y    +  W   EV M  D   + +   LT +E+  IK  L FFA+S+
Sbjct: 38  IFPIQYPEIWEFYKMHESTFWTVEEVDMTFDCEHFST---LTPNEQFFIKYVLAFFAASD 94

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+V      +   E + +   Q   E +HS  +  +I +L  D+ E   LFN   
Sbjct: 95  GIVNENLVERFSSEVQILEAKMFYGFQIAIENIHSEMYSKLIETLIRDKEEQTYLFNAIE 154

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +PSI  KA WA ++  + +S
Sbjct: 155 NIPSIRKKALWAQKWIASDTS 175


>gi|193890961|gb|ACF28634.1| ribonucleotide reductase [Amphidinium carterae]
          Length = 213

 Score = 62.0 bits (149), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 6/128 (4%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WE Y     + W   E+ +  D   W+S   LT  E+  IK  L FFA+S+ +V  N+  
Sbjct: 6   WEMYKKHEASFWTAEEIDLSKDNVDWES---LTSSEQHFIKHVLAFFAASDGIVLENLAG 62

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL---GLDEGELFNMYREVPSITAKA 159
                +  PE R +   Q   E +HS T+  +I        ++ ++ N    +P++  KA
Sbjct: 63  QFACEIQVPEARAFYGFQIAMENIHSETYSLLIEQYIKEPQEKADILNAIETMPAVAEKA 122

Query: 160 NWALQYTQ 167
            WA+Q+ Q
Sbjct: 123 KWAVQWMQ 130


>gi|163781846|ref|ZP_02176846.1| ribonucleotide reductase beta chain [Hydrogenivirga sp. 128-5-R1-1]
 gi|159883066|gb|EDP76570.1| ribonucleotide reductase beta chain [Hydrogenivirga sp. 128-5-R1-1]
          Length = 350

 Score = 62.0 bits (149), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 92/177 (51%), Gaps = 8/177 (4%)

Query: 21  DKRMLNAR-SDVNQLLPLKYGWAWEKYLS-ACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
           ++R++N   +++ +L  +KY WA++ Y +   +N W+P E+P+ +D   ++    L+D E
Sbjct: 25  NRRIINGNPTNIIELNNIKYPWAFDLYKTMGFSNFWIPEEIPLMEDKKQYER--VLSDYE 82

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           R   +  L F  + +S   + ++    R +S PE    L  Q F+E++H++++Q+I+ S+
Sbjct: 83  RRAYELVLSFLIALDSFQVD-MLKDFARMISAPEVEMALTAQEFQESIHAYSYQFILESV 141

Query: 139 --GLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRF 192
              +   E++N +RE   +  +     + Y + +  PS   + K      +  SL F
Sbjct: 142 VDPIKADEIYNYWREDEKLKERNEVVAEVYNEFIRKPSEENFIKAVIGNYILESLYF 198


>gi|167837964|ref|ZP_02464823.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
          thailandensis MSMB43]
          Length = 70

 Score = 62.0 bits (149), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 25/37 (67%), Positives = 31/37 (83%)

Query: 12 AGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLS 48
          A E RVNV DKR++N ++DVNQL+P KY WAWEKYL+
Sbjct: 33 ASEARVNVADKRIINGKTDVNQLVPFKYKWAWEKYLA 69


>gi|261599112|ref|YP_003257364.1| ribonucleotide-diphosphate reductase beta subunit [Blattabacterium
           sp. (Periplaneta americana) str. BPLAN]
 gi|261497769|gb|ACX84218.1| ribonucleotide-diphosphate reductase beta subunit [Blattabacterium
           sp. (Periplaneta americana) str. BPLAN]
          Length = 357

 Score = 62.0 bits (149), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 6/108 (5%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA+E +    N HW+ TE+ MQ D+  W +KN LTD E+ +I   L  FA +E+ 
Sbjct: 12  PFEYQWAYEYWFKQQNAHWLHTEINMQSDIYDW-NKN-LTDQEKNVIGDILKGFAQTETE 69

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFE--EAVHSHTFQYIITSLGLD 141
           V N     I +    PE +  ++ QAF   E +H+  + Y+   LGLD
Sbjct: 70  VGNYWSEMIPKWFPIPEIK--MMGQAFGSFETIHAAAYSYLNDILGLD 115


>gi|189501948|ref|YP_001957665.1| hypothetical protein Aasi_0535 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497389|gb|ACE05936.1| hypothetical protein Aasi_0535 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 355

 Score = 62.0 bits (149), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 6/140 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+++   WE Y  A  + W   E+ +  DL  W +   L D ER  I   L FFA+S+
Sbjct: 46  LFPIEHHDIWEFYKKAEASFWTAEEIDLGQDLKDWAN---LNDGERHFISHVLAFFAASD 102

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +   E + +   Q   E +HS T+  +I +   D  E   LFN   
Sbjct: 103 GIVNENLAENFVAEVQYTEAKFFYGFQIAVENIHSETYSLLIDTYIKDPQERDKLFNAID 162

Query: 151 EVPSITAKANWALQYTQTLS 170
            +  +  KA+WAL++ +  S
Sbjct: 163 TLDCVKKKADWALRWIEQAS 182


>gi|209966751|ref|YP_002299666.1| ribonucleotide-diphosphate reductase subunit beta [Rhodospirillum
           centenum SW]
 gi|209960217|gb|ACJ00854.1| ribonucleoside-diphosphate reductase, beta subunit [Rhodospirillum
           centenum SW]
          Length = 322

 Score = 61.6 bits (148), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 64/120 (53%), Gaps = 6/120 (5%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA+E +L+    HW+P EVP+ DD+  W+ K  LT+ ER ++ +   FF  ++  
Sbjct: 14  PFRYPWAYEAWLTQQRIHWLPEEVPLADDVKDWRQK--LTEAERNLLTQIFRFFTQADVE 71

Query: 96  VANNIVLAIYRHLSNP-ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL--FNMYREV 152
           V NN  +  Y  +  P E    L   +  E VH   + +++ ++G+ E E   F  Y+E+
Sbjct: 72  V-NNCYMRHYSRVFQPTEVCMMLAAFSAMETVHIAAYSHLLDTIGMPEIEYSAFLRYKEM 130


>gi|295691241|ref|YP_003594934.1| Ribonucleoside-diphosphate reductase [Caulobacter segnis ATCC
           21756]
 gi|295433144|gb|ADG12316.1| Ribonucleoside-diphosphate reductase [Caulobacter segnis ATCC
           21756]
          Length = 346

 Score = 61.6 bits (148), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 7/138 (5%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA++ +      HWMP EVP+ +DL  W  K  L D ER ++ +   FF  S+  
Sbjct: 21  PFRYPWAYDFWKKQQQVHWMPEEVPLGEDLKDWAVK--LNDKERNLLTQIFRFFTQSDVE 78

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V +N +    R     E +  L   A  E +H   +  ++ ++G+ E E F+ + E  ++
Sbjct: 79  VQDNYMERYGRVFKPTEVKMMLASFANMETIHIAAYALLLETIGMPETE-FSAFMEYEAM 137

Query: 156 TAKANWALQYTQTLSSPS 173
             K +    Y QT    S
Sbjct: 138 KDKHD----YMQTFGVDS 151


>gi|160881347|ref|YP_001560315.1| ribonucleoside-diphosphate reductase [Clostridium phytofermentans
           ISDg]
 gi|160430013|gb|ABX43576.1| Ribonucleoside-diphosphate reductase [Clostridium phytofermentans
           ISDg]
          Length = 342

 Score = 61.6 bits (148), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 65/117 (55%), Gaps = 6/117 (5%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA   Y +  NN W+P E+ +Q+D+   K    LTD ER    + + F    +S+ 
Sbjct: 32  IKYDWARLIYRTMLNNFWIPEEISLQEDV---KQFPYLTDGERNAFDKIIAFLNFLDSIQ 88

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELFNMYRE 151
           + N+   I R+++ PE    L  QAF+E +H+ ++ YI+ ++   +    +++++RE
Sbjct: 89  SENLP-NISRYITAPEVSSLLNVQAFQEEIHAQSYSYILDTVTNPVTRDRIYDIWRE 144


>gi|182419335|ref|ZP_02950587.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           butyricum 5521]
 gi|237666940|ref|ZP_04526925.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           butyricum E4 str. BoNT E BL5262]
 gi|182376666|gb|EDT74238.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           butyricum 5521]
 gi|237658139|gb|EEP55694.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           butyricum E4 str. BoNT E BL5262]
          Length = 344

 Score = 61.6 bits (148), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 5/121 (4%)

Query: 19  VDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           +  KR++N  + ++N    +KY W  + Y    NN W+P EV +  DL   K    L D+
Sbjct: 17  ITKKRLINGNTTNLNDFNNMKYTWVSDWYRQGMNNFWIPEEVNLSQDL---KDYQNLLDE 73

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           ER+   + L F    +S+   N+   I  +++  E    L  Q+F+EAVHS ++ Y++ S
Sbjct: 74  ERIAYDKILSFLIFLDSIQTANLS-NINNYITASEVNLCLTIQSFQEAVHSQSYSYMLDS 132

Query: 138 L 138
           +
Sbjct: 133 I 133


>gi|330994651|ref|ZP_08318574.1| putative ribonucleoside-diphosphate reductase small subunit
           [Gluconacetobacter sp. SXCC-1]
 gi|329758292|gb|EGG74813.1| putative ribonucleoside-diphosphate reductase small subunit
           [Gluconacetobacter sp. SXCC-1]
          Length = 365

 Score = 61.2 bits (147), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 8/121 (6%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA++ +L+    HW+P EVP+ DD+  W     LT+ ER ++ +   FF  S+  
Sbjct: 57  PFRYPWAYDAWLTQQRVHWLPEEVPLADDVKDWHRT--LTESERHLVTQIFRFFTQSDVE 114

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFE--EAVHSHTFQYIITSLGLDEGEL--FNMYRE 151
           V NN  +  Y  +  P     ++  AF   E +H   + +++ ++G+ E E   F  Y+E
Sbjct: 115 V-NNCYMKHYSQVFKP-TEVLMMLSAFSNIETIHIAAYSHLLDTIGMPETEYSAFLKYKE 172

Query: 152 V 152
           +
Sbjct: 173 M 173


>gi|289449785|ref|YP_003474451.1| ribonucleoside-diphosphate reductase subunit beta [Clostridiales
           genomosp. BVAB3 str. UPII9-5]
 gi|289184332|gb|ADC90757.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridiales
           genomosp. BVAB3 str. UPII9-5]
          Length = 400

 Score = 61.2 bits (147), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 5/123 (4%)

Query: 17  VNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           + +D K+M+    +++N    +KY W  + Y    NN W+P E+ M  D+  +++   L 
Sbjct: 69  IGLDKKKMIGGNPTNLNDFNNVKYKWVSDIYRQMMNNFWIPEEINMSTDVQQYRT---LP 125

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
             ER    + L F    +SL  NN+   I ++++  E    L  QAF+EAVHS ++ Y++
Sbjct: 126 VAERRAYDKILSFLVFLDSLQTNNVPF-IAQYITANEAVLCLTIQAFQEAVHSQSYSYML 184

Query: 136 TSL 138
            ++
Sbjct: 185 DTI 187


>gi|213402763|ref|XP_002172154.1| ribonucleoside-diphosphate reductase small chain
           [Schizosaccharomyces japonicus yFS275]
 gi|212000201|gb|EEB05861.1| ribonucleoside-diphosphate reductase small chain
           [Schizosaccharomyces japonicus yFS275]
          Length = 392

 Score = 61.2 bits (147), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 77/168 (45%), Gaps = 8/168 (4%)

Query: 8   SPIQAGEKRVNVDDKRML-NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           SP   G+K    D+  +  N R  V  + P++Y   W+ Y  A  + W   E+ +  DL 
Sbjct: 55  SPYYLGKKEDEKDEVVLTPNPRRFV--MFPIEYHDIWQFYKKAEASFWTAEEIDLSKDLH 112

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            W +K  L  DER  I   L +FA+S+ +V  N++      +   E R     Q   E +
Sbjct: 113 DWDNK--LNKDERYFISTVLAYFAASDGIVNENLLSRFSSEVQIAEARCVYGFQIMIENI 170

Query: 127 HSHTFQYIITSLGLDEGEL---FNMYREVPSITAKANWALQYTQTLSS 171
           HS T+  ++ +   D  E    F+    + SI AKA WAL++ +   S
Sbjct: 171 HSETYSLLLDTYIRDPYEKQRHFDAILTMGSIKAKAKWALRWIEDPES 218


>gi|323450429|gb|EGB06310.1| hypothetical protein AURANDRAFT_65685 [Aureococcus anophagefferens]
          Length = 349

 Score = 61.2 bits (147), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 5/136 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+++   W+ Y  A  + W   E+ +  D+  W  K  L D ER  IK  L FFA+S+
Sbjct: 41  LFPIEHDDVWQMYKKAEASFWTAEEIDLCHDIKDWDQK--LNDKERHFIKHVLAFFAASD 98

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD---EGELFNMYR 150
            +V  N+       +   E R +   Q   E +HS  +  +I +   D   + E      
Sbjct: 99  GIVNENLAQNFATEVQWAEARCFYGFQIAIENIHSEVYSLLIDTYIRDAKEKHECLTAID 158

Query: 151 EVPSITAKANWALQYT 166
            +P +T KA WAL++ 
Sbjct: 159 TMPCVTKKAQWALRWC 174


>gi|158518255|gb|AAC48087.2| Hypothetical protein F58F9.1 [Caenorhabditis elegans]
          Length = 500

 Score = 61.2 bits (147), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 6/140 (4%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P+ +   WE Y  A    W   EV +  D++ W+    LT DER  I   L FFA+S+ +
Sbjct: 321 PIVHRDIWEFYKKAVACFWTSEEVDLGKDMSHWEI---LTSDERQFISSILAFFAASDGI 377

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREV 152
           V  N+       +   E R +   Q   E +HS  +  ++ +   D+ E   LFN     
Sbjct: 378 VTENLCSRFSTEVQVTEARFFYGFQIAVENIHSEMYAKLLEAYIRDDAERNILFNAITTF 437

Query: 153 PSITAKANWALQYTQTLSSP 172
             I AKA+W L++    ++P
Sbjct: 438 KFIKAKADWCLRWISDHNAP 457


>gi|193206379|ref|NP_500944.2| hypothetical protein F58F9.1 [Caenorhabditis elegans]
          Length = 581

 Score = 61.2 bits (147), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 6/140 (4%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P+ +   WE Y  A    W   EV +  D++ W+    LT DER  I   L FFA+S+ +
Sbjct: 321 PIVHRDIWEFYKKAVACFWTSEEVDLGKDMSHWEI---LTSDERQFISSILAFFAASDGI 377

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREV 152
           V  N+       +   E R +   Q   E +HS  +  ++ +   D+ E   LFN     
Sbjct: 378 VTENLCSRFSTEVQVTEARFFYGFQIAVENIHSEMYAKLLEAYIRDDAERNILFNAITTF 437

Query: 153 PSITAKANWALQYTQTLSSP 172
             I AKA+W L++    ++P
Sbjct: 438 KFIKAKADWCLRWISDHNAP 457


>gi|329888543|ref|ZP_08267141.1| ribonucleotide reductase, small chain family protein [Brevundimonas
           diminuta ATCC 11568]
 gi|328847099|gb|EGF96661.1| ribonucleotide reductase, small chain family protein [Brevundimonas
           diminuta ATCC 11568]
          Length = 348

 Score = 60.8 bits (146), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 3/130 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA++ +      HWMP EVPM +D+  W +   L D ER ++ +   FF  ++  
Sbjct: 24  PFRYPWAFDMWKKQQQVHWMPEEVPMGEDVKDWAAN--LNDGERNLLTQIFRFFTQADIE 81

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V +N +    R     E +  L   A  E +H   +  ++ ++G+ E E F  + E  ++
Sbjct: 82  VQDNYMERYGRVFKPTEVKMMLAAFANMETIHIAAYALLLETIGMPESE-FGAFMEYEAM 140

Query: 156 TAKANWALQY 165
             K ++  Q+
Sbjct: 141 KDKHDYMGQF 150


>gi|296536499|ref|ZP_06898590.1| ribonucleotide-diphosphate reductase subunit beta [Roseomonas
           cervicalis ATCC 49957]
 gi|296263178|gb|EFH09712.1| ribonucleotide-diphosphate reductase subunit beta [Roseomonas
           cervicalis ATCC 49957]
          Length = 343

 Score = 60.8 bits (146), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 8/121 (6%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA++ +++    HW+P EVPM DD+  W  +  LT+ ER ++ +   FF  ++  
Sbjct: 21  PFRYPWAYDAWMTQQRVHWLPEEVPMADDVKDW--QKNLTESERNLLTQIFRFFTQADVE 78

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFE--EAVHSHTFQYIITSLGLDEGEL--FNMYRE 151
           V NN  +  Y  +  P     ++  AF   E +H   + +++ ++G+ E E   F  Y+E
Sbjct: 79  V-NNCYMKHYSQVFKP-TEVLMMLSAFSNIETIHIAAYSHLLDTIGMPETEYQAFLKYKE 136

Query: 152 V 152
           +
Sbjct: 137 M 137


>gi|225320685|dbj|BAH29738.1| ribonucleoside-diphosphate reductase subunit M2 [Dicyema japonicum]
          Length = 337

 Score = 60.8 bits (146), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 6/141 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   +  Y  A  + W   EV +  D+  W   N L  DE+  I   L FFA+S+
Sbjct: 27  LFPIEYPDIFTMYKQALASIWTVEEVDLSKDIKHW---NILNSDEKRFISHVLAFFAASD 83

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD---EGELFNMYR 150
            +V  N+V      +   E R +   Q   E +HS  +  +I +   D   + ++F+   
Sbjct: 84  GIVNENLVQRFSVEVQVSEARSFYGLQIAVENIHSEMYSLLIDTYISDFQEKDKMFSAIE 143

Query: 151 EVPSITAKANWALQYTQTLSS 171
            +P +  KA+WA+++ ++  S
Sbjct: 144 TMPFVKKKADWAIRWIESTES 164


>gi|15150459|ref|NP_150454.1| LSDV020 ribonucleotide reductase small subunit [Lumpy skin disease
           virus NI-2490]
 gi|15149031|gb|AAK84981.1| LSDV020 ribonucleotide reductase small subunit [Lumpy skin disease
           virus NI-2490]
 gi|22595554|gb|AAN02587.1| ribonucleotide reductase small subunit [Lumpy skin disease virus
           NW-LW]
          Length = 321

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 6/132 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+ Y   W  Y  A  + W   EV +  DLA WK    L+++E+  IK  L FFA+S+
Sbjct: 14  VFPILYKEIWVMYKKAVASFWTVDEVDLSKDLADWKK---LSNEEQYFIKNILAFFAASD 70

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII---TSLGLDEGELFNMYR 150
            +V  N+    Y  +   E R +   Q   E +HS  +  +I    S   ++  LFN   
Sbjct: 71  GIVNENLAERFYSEVQWSEARCFYGFQIAMENIHSEMYSLLIDTYISSTKEKEHLFNAIE 130

Query: 151 EVPSITAKANWA 162
            +  I  K+ WA
Sbjct: 131 TMDFIKKKSEWA 142


>gi|148700272|gb|EDL32219.1| mCG1034315 [Mus musculus]
          Length = 213

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 6/150 (4%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           E  V  +++ +L   S    + P++Y   W  Y  A  + W   EV +  +L  W   N 
Sbjct: 67  ENVVRSNEEPLLRKSSRRFVIFPIQYPDIWRMYKQARASFWTGEEVDLSKNLPHW---NK 123

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           L  DE+  I   L FFA+S+ +V  N+V    + +  PE   +   Q   E VHS  +  
Sbjct: 124 LKSDEKYFISHILAFFAASDGIVNENLVERFSQEVQVPETHCFYGFQILIENVHSEMYSL 183

Query: 134 IITSLGLDEGE---LFNMYREVPSITAKAN 160
           +I +   D  +   LFN    +P +  KA+
Sbjct: 184 LIDTYIRDPKKREFLFNAIETMPYVKKKAD 213


>gi|209877302|ref|XP_002140093.1| ribonucleotide-diphosphate reductase, small subunit
           [Cryptosporidium muris RN66]
 gi|209555699|gb|EEA05744.1| ribonucleotide-diphosphate reductase, small subunit, putative
           [Cryptosporidium muris RN66]
          Length = 346

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 7/159 (4%)

Query: 11  QAGEK-RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           QA EK +    ++ +L++ + ++Q++  +    W  Y     + W   E+ +  D+  W+
Sbjct: 16  QAVEKIKAMQHEEPVLSSDTRLHQIIKSEIEVMWSMYKKEEASFWTAEEIDLGQDMRDWE 75

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
           S   L + E+  IK  L FFA+S+ +V  N+ +   + +   E R Y   Q   E +HS 
Sbjct: 76  S---LKEPEKHFIKYVLAFFAASDGIVMENLAVNFLKEIQIEEARMYYGFQIAMEQIHSE 132

Query: 130 TFQYII---TSLGLDEGELFNMYREVPSITAKANWALQY 165
           T+  +I    S   D   LF     +P++  KA WA ++
Sbjct: 133 TYSLLIDQYISDVKDRQMLFEAISHLPAVKTKAKWATKW 171


>gi|296271635|ref|YP_003654266.1| ribonucleoside-diphosphate reductase [Arcobacter nitrofigilis DSM
           7299]
 gi|296095810|gb|ADG91760.1| Ribonucleoside-diphosphate reductase [Arcobacter nitrofigilis DSM
           7299]
          Length = 339

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 8/172 (4%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEV 59
           MA  T  +P    + + ++ D+R+     D +     +KY WA   + +   N W P EV
Sbjct: 1   MARKTIYNP----DSKESLSDRRIFGGNPDGMINFTKMKYQWALNLWDTMEANTWFPREV 56

Query: 60  PMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLR 119
            M  D   +K    LT  E+ M    L      +SL  NN++  I  +++ PE    L R
Sbjct: 57  QMTGDAKDYKY---LTPAEKRMYDLVLSQLIFMDSLQTNNLMDNINPYITVPEINACLSR 113

Query: 120 QAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSS 171
           Q++EEA HS ++  ++ S+  +  E+++M++    +  K N+       LS 
Sbjct: 114 QSYEEANHSKSYAVMVESISDNTDEIYDMWKNDTQLREKNNYIAAVYDNLSD 165


>gi|167648664|ref|YP_001686327.1| ribonucleotide-diphosphate reductase subunit beta [Caulobacter sp.
           K31]
 gi|167351094|gb|ABZ73829.1| Ribonucleoside-diphosphate reductase [Caulobacter sp. K31]
          Length = 346

 Score = 60.5 bits (145), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 2/110 (1%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA E +      HWMP EVP+ +DL  W  K  L D ER ++ +   FF  S+  
Sbjct: 20  PFRYPWAHEFWKKQQQVHWMPEEVPLGEDLKDWAVK--LNDKERNLLTQIFRFFTQSDIE 77

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL 145
           VA+N +    R     E +  L   A  E +H   +  ++ ++G+ E E 
Sbjct: 78  VADNYMERYGRVFKPTEVKMMLSSFANMETIHIAAYALLLETIGMPESEF 127


>gi|83859670|ref|ZP_00953190.1| ribonucleotide-diphosphate reductase beta subunit [Oceanicaulis
           alexandrii HTCC2633]
 gi|83852029|gb|EAP89883.1| ribonucleotide-diphosphate reductase beta subunit [Oceanicaulis
           alexandrii HTCC2633]
          Length = 348

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 12/146 (8%)

Query: 24  MLNARSDVNQLL-------PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           ML   SD   LL       P +Y WA++ +      HW+P EVP+ +D   W +K  LTD
Sbjct: 1   MLTVASDRPGLLTPSLTYKPFRYPWAYDFWKVQSQVHWLPEEVPLGEDCKDWATK--LTD 58

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP-ECRQYLLRQAFEEAVHSHTFQYII 135
            ER ++ +   FF  S+  V  N  +  Y  L  P E R  L   +  E +H   +  ++
Sbjct: 59  KERNLLTQIFRFFTQSDVEVGAN-YMENYMPLFKPVEVRMMLAAFSNMETIHIAAYALLL 117

Query: 136 TSLGLDEGELFNMYREVPSITAKANW 161
            ++G+ + E F+ + E   + AK ++
Sbjct: 118 ETIGMPDTE-FSAFMEYEEMAAKHDY 142


>gi|150015087|ref|YP_001307341.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           beijerinckii NCIMB 8052]
 gi|149901552|gb|ABR32385.1| Ribonucleoside-diphosphate reductase [Clostridium beijerinckii
           NCIMB 8052]
          Length = 344

 Score = 60.1 bits (144), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 5/121 (4%)

Query: 19  VDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           +  KR++N  + ++N    +KY W  + Y    NN W+P EV +  DL   K    L ++
Sbjct: 17  ISKKRIINGNTTNLNDFNNMKYSWVSDWYRQGMNNFWIPEEVNLSQDL---KDYQNLLEE 73

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           ER+   + L F    +S+   N+   I  +++  E    L  Q+F+EAVHS ++ Y++ S
Sbjct: 74  ERIAYDKILSFLIFLDSIQTANLS-NINNYITASEINLCLTIQSFQEAVHSQSYSYMLDS 132

Query: 138 L 138
           +
Sbjct: 133 I 133


>gi|190570498|ref|YP_001974856.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Culex quinquefasciatus Pel]
 gi|213019257|ref|ZP_03335064.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Culex quinquefasciatus JHB]
 gi|190356770|emb|CAQ54129.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Culex quinquefasciatus Pel]
 gi|212995366|gb|EEB56007.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Culex quinquefasciatus JHB]
          Length = 329

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 72/141 (51%), Gaps = 5/141 (3%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA++ +L     HW+P EVP+ DD+  WK+K  L++ E+ ++ +   FF  ++ +
Sbjct: 12  PFNYPWAYDAWLQQQRIHWIPEEVPLADDVKDWKTK--LSNVEKNLLTQIFRFFTQAD-I 68

Query: 96  VANNIVLAIYRHLSNP-ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPS 154
             NN  +  Y ++  P E    L   +  E +H   + Y++ ++G+ E E +  + +  +
Sbjct: 69  EVNNCYMRHYSNIFKPTEICMMLASFSNMETIHIAAYSYLLDTIGMPESE-YQAFLKYDA 127

Query: 155 ITAKANWALQYTQTLSSPSFH 175
           +  K  + L++ ++      H
Sbjct: 128 MRKKYEYMLEFEESKKQDKKH 148


>gi|225712968|gb|ACO12330.1| Ribonucleoside-diphosphate reductase small chain [Lepeophtheirus
           salmonis]
          Length = 335

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 59/135 (43%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+ Y   W  Y  A    W   EV +  DL  W     L  DE+  I   L FFA+S+
Sbjct: 28  MFPIVYKDIWFMYKKALATFWTVEEVDLSKDLMDWAK---LNKDEKHFISNVLAFFAASD 84

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N++      +   E R +   Q   E +HS  +  +I +   D+ E   LFN   
Sbjct: 85  GIVNENLLERFASEVQIAEARSFYGFQIMIENIHSEMYSLLIDTYIEDDKEKDKLFNSIL 144

Query: 151 EVPSITAKANWALQY 165
            +  +  KA WAL++
Sbjct: 145 TIECVKKKAEWALRW 159


>gi|237738278|ref|ZP_04568759.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           mortiferum ATCC 9817]
 gi|229420158|gb|EEO35205.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           mortiferum ATCC 9817]
          Length = 348

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 5/121 (4%)

Query: 19  VDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           +++++++   S ++  L  +KYGWA   Y +   N W+P ++ +  D   +   N LT+ 
Sbjct: 19  LNERKIIKGNSTNIFNLNNVKYGWANHLYRTMMGNFWIPEKIDLTQDRVDY---NNLTNY 75

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+      L F    +S+  NNI   I  +++ PE    L  Q F+EA+HS ++QYII S
Sbjct: 76  EKEAYDGILSFLIFLDSIQTNNIP-NISDYITAPEINLILSIQTFQEAIHSQSYQYIIES 134

Query: 138 L 138
           +
Sbjct: 135 I 135


>gi|325119319|emb|CBZ54873.1| hypothetical protein NCLIV_052980 [Neospora caninum Liverpool]
          Length = 392

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 3/119 (2%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           +LP+++   WE Y     + W   E+ +  D+  W+S N    +E+  IK  L FFA+S+
Sbjct: 86  ILPIQHHAIWEMYKKQEASFWTAEEIDLAQDMTHWESLNS---NEKHFIKYVLAFFAASD 142

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
            +V  N+       +  PE R +   Q   E +HS T+  +I     DE E   ++  V
Sbjct: 143 GIVLENLAEKFLSEIQIPEARAFYGFQIAMENIHSETYSLLIDQYIRDEKEKMELFDAV 201


>gi|118443949|ref|YP_878438.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           novyi NT]
 gi|118134405|gb|ABK61449.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           novyi NT]
          Length = 342

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 64/117 (54%), Gaps = 6/117 (5%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA E Y +  NN W+P E+ + +D+   K    LTD ER    + + F    +S+ 
Sbjct: 32  IKYNWANELYRTMLNNFWIPEEISLNEDV---KQFPYLTDGERNAFDKIISFLNFLDSVQ 88

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELFNMYRE 151
           + N+   I R+++ PE    L  Q F+E +H+ ++ YI+ ++   +   ++++ +RE
Sbjct: 89  SENLP-NISRYITAPEVSSLLNVQTFQEEIHAQSYSYILDTVTNPITRDKIYDQWRE 144


>gi|22595713|gb|AAN02745.1| ribonucleotide reductase small subunit [lumpy skin disease virus]
          Length = 321

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 60/132 (45%), Gaps = 6/132 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+ Y   W  Y  A  + W   EV +  DLA WK    L ++E+  IK  L FFA+S+
Sbjct: 14  VFPILYKEIWVMYKKAVASFWTVDEVDLSKDLADWKK---LNNEEQYFIKNILAFFAASD 70

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII---TSLGLDEGELFNMYR 150
            +V  N+    Y  +   E R +   Q   E +HS  +  +I    S   ++  LFN   
Sbjct: 71  GIVNENLAERFYSEVQWSEARCFYGFQIAMENIHSEMYSLLIDTYISSTKEKEHLFNAIE 130

Query: 151 EVPSITAKANWA 162
            +  I  K+ WA
Sbjct: 131 TMDFIKKKSEWA 142


>gi|254418345|ref|ZP_05032069.1| ribonucleoside-diphosphate reductase, beta subunit [Brevundimonas
           sp. BAL3]
 gi|196184522|gb|EDX79498.1| ribonucleoside-diphosphate reductase, beta subunit [Brevundimonas
           sp. BAL3]
          Length = 349

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 63/130 (48%), Gaps = 3/130 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA++ +      HWMP EVP+ +D+  W S   L D+ER ++ +   FF  ++  
Sbjct: 24  PFRYPWAFDMWKKQQQVHWMPEEVPLGEDVKDWAST--LNDNERNLLTQIFRFFTQADIE 81

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V +N +    R     E +  L      E +H   +  ++ ++G+ E E F  + E  ++
Sbjct: 82  VQDNYMERYGRVFKPTEIKMMLAAFGNMETIHIAAYALLLETIGMPESE-FGAFMEYEAM 140

Query: 156 TAKANWALQY 165
             K ++  Q+
Sbjct: 141 RDKHDYMGQF 150


>gi|162147608|ref|YP_001602069.1| ribonucleotide-diphosphate reductase subunit beta
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209542240|ref|YP_002274469.1| ribonucleotide-diphosphate reductase subunit beta
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786185|emb|CAP55767.1| putative ribonucleotide reductase small subunit [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209529917|gb|ACI49854.1| Ribonucleoside-diphosphate reductase [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 353

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 79/156 (50%), Gaps = 11/156 (7%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           + N TG +P ++  +   V+ +  L   + + +  P +Y WA++ +L+    HW+P EVP
Sbjct: 4   ITNATGTAP-ESAPQPTGVEARLDLLTSNPIYK--PFRYPWAYDAWLTQQRVHWLPEEVP 60

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           + DD+  W     LT+ E+ ++ +   FF  S+  V NN  +  Y  +  P     ++  
Sbjct: 61  LADDVKDWHRT--LTESEQHLVTQIFRFFTQSDVEV-NNCYMKHYSRVFKP-TEVLMMLS 116

Query: 121 AFE--EAVHSHTFQYIITSLGLDEGEL--FNMYREV 152
           AF   E +H   + +++ ++G+ E E   F  Y+E+
Sbjct: 117 AFSNIETIHIAAYSHLLDTIGMPEMEYSAFLKYKEM 152


>gi|10344|emb|CAA26307.1| unnamed protein product [Spisula solidissima]
          Length = 300

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 6/129 (4%)

Query: 46  YLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIY 105
           Y  A  + W   EV +  D+A W+S   L  +E+  I   L FFA+S+ +V  N+V    
Sbjct: 2   YKKAEASFWTAEEVDLSKDMAHWES---LKKEEKHFISHVLAFFAASDGIVNENLVERFS 58

Query: 106 RHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWA 162
           + +   E R +   Q   E +HS  +  +I +   D  E   LFN    +P +  KA+WA
Sbjct: 59  KEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPQERDFLFNAIETMPCVKEKADWA 118

Query: 163 LQYTQTLSS 171
           +++    SS
Sbjct: 119 MRWINDDSS 127


>gi|13876672|gb|AAK43560.1| ribonucleoside reductase [lumpy skin disease virus]
          Length = 321

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 60/132 (45%), Gaps = 6/132 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+ Y   W  Y  A  + W   EV +  DLA WK    L ++E+  IK  L FFA+S+
Sbjct: 14  VFPILYKEIWVMYKKAVASFWTVDEVDLSKDLADWKK---LNNEEQYFIKNILAFFAASD 70

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII---TSLGLDEGELFNMYR 150
            +V  N+    Y  +   E R +   Q   E +HS  +  +I    S   ++  LFN   
Sbjct: 71  GIVNENLAERFYSEVQWSEARCFYGFQIAMENIHSEMYSLLIDTYISSTKEKEHLFNAIE 130

Query: 151 EVPSITAKANWA 162
            +  I  K+ WA
Sbjct: 131 TMDFIKKKSEWA 142


>gi|297736972|emb|CBI26173.3| unnamed protein product [Vitis vinifera]
          Length = 312

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 6/126 (4%)

Query: 46  YLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIY 105
           Y  A  + W   EV +  D+  W+S   L++ E+  I   L FFA+S+ +V  N+     
Sbjct: 2   YKKAEASFWTAEEVDLSHDVQQWES---LSNSEKHFISHVLAFFAASDGIVLENLAARFL 58

Query: 106 RHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWA 162
             +  PE R +   Q   E +HS  +  ++ +   D  E   LFN    +  +  KA WA
Sbjct: 59  HDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIESISCVAGKAKWA 118

Query: 163 LQYTQT 168
           L + Q+
Sbjct: 119 LDWIQS 124


>gi|304321610|ref|YP_003855253.1| ribonucleoside-diphosphate reductase subunit beta [Parvularcula
           bermudensis HTCC2503]
 gi|303300512|gb|ADM10111.1| ribonucleoside-diphosphate reductase, beta subunit [Parvularcula
           bermudensis HTCC2503]
          Length = 340

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 5/127 (3%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA++ +      HWMP EVP+ +D   W +K  LTD ER ++ +   FF  S+  
Sbjct: 20  PFRYPWAYDYWKKQQQVHWMPEEVPLGEDCKDWANK--LTDKERNLLTQIFRFFTQSDVE 77

Query: 96  VANNIVLAIYRHLSNP-ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPS 154
           V  N  +  Y  L  P E R  L   +  E +H   +  ++ ++G+ E E F+ + +  +
Sbjct: 78  VGAN-YMENYMPLFKPVEVRMMLAAFSNMETIHIAAYALLLETIGMPEVE-FSAFMDYEA 135

Query: 155 ITAKANW 161
           + AK ++
Sbjct: 136 MAAKHDY 142


>gi|148912897|ref|YP_001293211.1| hypothetical protein GTPV_gp017 [Goatpox virus Pellor]
          Length = 321

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 60/132 (45%), Gaps = 6/132 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+ Y   W  Y  A  + W   EV +  DLA WK    L ++E+  IK  L FFA+S+
Sbjct: 14  VFPILYKEIWVMYKKAVASFWTVDEVDLSKDLADWKK---LNNEEQYFIKNILAFFAASD 70

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII---TSLGLDEGELFNMYR 150
            +V  N+    Y  +   E R +   Q   E +HS  +  +I    S   ++  LFN   
Sbjct: 71  GIVNENLAERFYSEVQWSEARCFYGFQIAIENIHSEMYSLLIDTYISSTKEKEHLFNAIE 130

Query: 151 EVPSITAKANWA 162
            +  I  K+ WA
Sbjct: 131 TMDFIKKKSEWA 142


>gi|225849393|ref|YP_002729557.1| ribonucleoside-diphosphate reductase subunit beta
           [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644764|gb|ACN99814.1| ribonucleoside-diphosphate reductase, beta subunit
           [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 326

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 3/114 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    E Y       W P E+ +Q D+  +KS   LT  E+ +    +G+FASSE LV 
Sbjct: 20  KYPVFRELYTKQKKAVWFPEELNIQQDVLDYKS---LTPTEKDLFDSAVGYFASSELLVQ 76

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYRE 151
           N +    +  L++P  +     Q F E +HS  F+ I+ S  +D  +++N+  E
Sbjct: 77  NVLGNGFFPVLTDPYAKMSFSTQMFMENIHSDFFEIILNSFDMDRKKIYNITLE 130


>gi|282174133|ref|YP_003358235.1| ORF96 [Anguillid herpesvirus 1]
 gi|281308976|gb|ADA57859.1| ORF96 [Anguillid herpesvirus 1]
          Length = 328

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 5/147 (3%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +L+  ++ +   P++    W  Y +A   +W   EV +  D+  W+ +  L  DER  I 
Sbjct: 9   LLDPANNRDVTFPIREHAIWAMYKTAQAANWSAEEVDLAQDVTHWEKR--LNKDERHFIS 66

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
             L FFA+++ LV  N+     + +   E   +   Q   E VH+  +  +I +L  D  
Sbjct: 67  HVLAFFAAADGLVNANLGQRFTQEVQYLEATYFYNFQMAIENVHAEMYSKLIATLIKDVK 126

Query: 144 E---LFNMYREVPSITAKANWALQYTQ 167
           E   LFN    +P I  KA WA ++T 
Sbjct: 127 EQDRLFNAVERMPCIAKKAEWAKRWTH 153


>gi|237845387|ref|XP_002371991.1| ribonucleotide-diphosphate reductase, small subunit, putative
           [Toxoplasma gondii ME49]
 gi|211969655|gb|EEB04851.1| ribonucleotide-diphosphate reductase, small subunit, putative
           [Toxoplasma gondii ME49]
 gi|221501644|gb|EEE27410.1| ribonucleotide-diphosphate reductase, small subunit, putative
           [Toxoplasma gondii VEG]
          Length = 391

 Score = 59.7 bits (143), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 3/119 (2%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           +LP+++   WE Y     + W   E+ +  D+  W++   L ++E+  IK  L FFA+S+
Sbjct: 85  ILPIQHHAIWEMYKKQEASFWTAEEIDLAQDMTHWET---LGENEKHFIKYVLAFFAASD 141

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
            +V  N+       +  PE R +   Q   E +HS T+  +I     DE E   ++  V
Sbjct: 142 GIVLENLAEKFLTEIQVPEARAFYGFQIAMENIHSETYSLLIDQYIRDEEEKLQLFDAV 200


>gi|221480670|gb|EEE19110.1| ribonucleotide-diphosphate reductase, small subunit, putative
           [Toxoplasma gondii GT1]
          Length = 391

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 3/119 (2%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           +LP+++   WE Y     + W   E+ +  D+  W++   L ++E+  IK  L FFA+S+
Sbjct: 85  ILPIQHHAIWEMYKKQEASFWTAEEIDLAQDMTHWET---LGENEKHFIKYVLAFFAASD 141

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
            +V  N+       +  PE R +   Q   E +HS T+  +I     DE E   ++  V
Sbjct: 142 GIVLENLAEKFLTEIQVPEARAFYGFQIAMENIHSETYSLLIDQYIRDEEEKLQLFDAV 200


>gi|58040422|ref|YP_192386.1| ribonucleotide-diphosphate reductase subunit beta [Gluconobacter
           oxydans 621H]
 gi|58002836|gb|AAW61730.1| Ribonucleoside-diphosphate reductase beta chain [Gluconobacter
           oxydans 621H]
          Length = 339

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 8/121 (6%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA++ +L+    HW+P EVP+ DD+  W     LT+ ER ++ +   FF  S+  
Sbjct: 27  PFRYPWAYDAWLTQQRVHWLPEEVPLADDVKDW--HRTLTEAERHLVTQIFRFFTQSDVE 84

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFE--EAVHSHTFQYIITSLGLDEGEL--FNMYRE 151
           V N+  +  Y  +  P     ++  AF   E +H   + +++ ++G+ E E   F  Y+E
Sbjct: 85  V-NSAYMKYYSQVFKP-TEVLMMLSAFSNIETIHIAAYSHLLDTIGMPETEYSAFLKYKE 142

Query: 152 V 152
           +
Sbjct: 143 M 143


>gi|15896521|ref|NP_349870.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           acetobutylicum ATCC 824]
 gi|15026352|gb|AAK81210.1|AE007823_4 Ribonucleotide reductase beta subunit [Clostridium acetobutylicum
           ATCC 824]
 gi|325510679|gb|ADZ22315.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           acetobutylicum EA 2018]
          Length = 344

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 5/118 (4%)

Query: 22  KRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           K+++N  + ++N    +KY W  + Y    NN W+P E+ +  DL   K    LTD+ER 
Sbjct: 20  KKIVNGNTTNLNDFNNMKYTWVSDWYRQGMNNFWIPEEINLSQDL---KDYGKLTDNERT 76

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
              + L F    +S+   N+   I  +++  E    L  QAF+EAVHS ++ Y++ ++
Sbjct: 77  AYDKILSFLIFLDSVQTANLG-NINDYITASEVNLCLTIQAFQEAVHSQSYSYMLDTI 133


>gi|42520108|ref|NP_966023.1| ribonucleotide-diphosphate reductase subunit beta [Wolbachia
           endosymbiont of Drosophila melanogaster]
 gi|58696705|ref|ZP_00372253.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila simulans]
 gi|58698234|ref|ZP_00373154.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila ananassae]
 gi|225630036|ref|YP_002726827.1| ribonucleotide-diphosphate reductase beta subunit [Wolbachia sp.
           wRi]
 gi|42409845|gb|AAS13957.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila melanogaster]
 gi|58535261|gb|EAL59340.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila ananassae]
 gi|58537117|gb|EAL60231.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila simulans]
 gi|225592017|gb|ACN95036.1| ribonucleotide-diphosphate reductase beta subunit [Wolbachia sp.
           wRi]
          Length = 329

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 70/134 (52%), Gaps = 5/134 (3%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA++ +L     HW+P EVP+ DD+  WK+K  L+  E+ ++ +   FF  ++ +
Sbjct: 12  PFNYPWAYDAWLQQQRIHWIPEEVPLADDVKDWKTK--LSSVEKNLLTQIFRFFTQAD-I 68

Query: 96  VANNIVLAIYRHLSNP-ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPS 154
             NN  +  Y ++  P E    L   +  E +H   + Y++ ++G+ E E +  + +  +
Sbjct: 69  EVNNCYMRHYSNIFKPTEICMMLASFSNMETIHIAAYSYLLDTIGMPESE-YQAFLKYDA 127

Query: 155 ITAKANWALQYTQT 168
           +  K  + L++ ++
Sbjct: 128 MRKKYEYMLEFEES 141


>gi|302381236|ref|YP_003817059.1| ribonucleoside-diphosphate reductase [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302191864|gb|ADK99435.1| Ribonucleoside-diphosphate reductase [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 348

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 3/126 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA++ +      HWMP EVP+ +D   W +   L D ER ++ +   FF  S+  
Sbjct: 23  PFRYPWAFDMWKKQQQVHWMPEEVPLGEDCKDWAAN--LNDKERNLLTQIFRFFTQSDIE 80

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           VA+N +    R     E +  L   A  E +H   +  ++ ++G+ E E F  + E  ++
Sbjct: 81  VADNYMEKYGRVFKPTEVKMMLSSFANMETIHIAAYALLLETIGMPESE-FGAFMEYEAM 139

Query: 156 TAKANW 161
             K ++
Sbjct: 140 RDKHDF 145


>gi|253582918|ref|ZP_04860136.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           varium ATCC 27725]
 gi|251835124|gb|EES63667.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           varium ATCC 27725]
          Length = 348

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 88/175 (50%), Gaps = 8/175 (4%)

Query: 22  KRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           +R++   S ++  L  +KY WA + Y +   N W+P ++ +  D   +K+   LTD E+ 
Sbjct: 22  RRIIKGDSTNIFNLNNVKYQWANQLYRTMMGNFWIPEKIDLTQDKNDYKN---LTDQEKE 78

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
                L F    +S+  NNI   +  +++ PE    L  Q F+EA+HS ++QYII S+  
Sbjct: 79  AYDGILSFLIFLDSIQTNNIP-NVCDYITAPEINLILSIQTFQEAIHSQSYQYIIESILP 137

Query: 141 DE--GELFNMYREVPSITAKANW-ALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
            E    +++ +RE   +  +  + A  Y + L +P+   ++K   +  L  ++ F
Sbjct: 138 KEIRNSIYDKWREDKILFERNKYIAEMYQRFLENPNDENFSKVIVADYLLEAIYF 192


>gi|227498392|ref|ZP_03928542.1| ribonucleoside-diphosphate reductase [Acidaminococcus sp. D21]
 gi|226903854|gb|EEH89772.1| ribonucleoside-diphosphate reductase [Acidaminococcus sp. D21]
          Length = 342

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 4/102 (3%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA   Y +  NN W+P E+ + +D+   K    LTD ER    + + F    +S+ 
Sbjct: 32  IKYDWANTLYRTMLNNFWIPEEISLNEDI---KQFPYLTDSERRAFDKIISFLNFLDSVQ 88

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           + N+   I R+++ PE    L  QAF+E +H+ ++ YI+ ++
Sbjct: 89  SENLP-NISRYITAPEVASLLNIQAFQEEIHAQSYSYILDTV 129


>gi|99036000|ref|ZP_01315041.1| hypothetical protein Wendoof_01000112 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 329

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 70/134 (52%), Gaps = 5/134 (3%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA++ +L     HW+P EVP+ DD+  WK+K  L+  E+ ++ +   FF  ++ +
Sbjct: 12  PFNYPWAYDAWLQQQRIHWIPEEVPLADDVKDWKTK--LSSVEKNLLTQIFRFFTQAD-I 68

Query: 96  VANNIVLAIYRHLSNP-ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPS 154
             NN  +  Y ++  P E    L   +  E +H   + Y++ ++G+ E E +  + +  +
Sbjct: 69  EVNNCYMRHYSNIFKPTEICMMLASFSNMETIHIAAYSYLLDTIGMPESE-YQAFLKYDA 127

Query: 155 ITAKANWALQYTQT 168
           +  K  + L++ ++
Sbjct: 128 MRKKYEYMLEFEES 141


>gi|329847182|ref|ZP_08262210.1| ribonucleotide reductase, small chain family protein [Asticcacaulis
           biprosthecum C19]
 gi|328842245|gb|EGF91814.1| ribonucleotide reductase, small chain family protein [Asticcacaulis
           biprosthecum C19]
          Length = 352

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 2/110 (1%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA+E +      HW+P EVP+ +D   W SK  L+D ER ++ +   FF  S+  
Sbjct: 23  PFRYPWAFEYWRKQQQVHWIPEEVPLGEDCKDWASK--LSDSERNLLTQIFRFFTQSDIE 80

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL 145
           V +N +    R     E +  L   A  E +H   +  ++ ++G+ E E 
Sbjct: 81  VQDNYLERYGRVFKPTEIKMMLSAFANMETIHIAAYALLLETIGMPESEF 130


>gi|160937686|ref|ZP_02085046.1| hypothetical protein CLOBOL_02576 [Clostridium bolteae ATCC
           BAA-613]
 gi|158439331|gb|EDP17083.1| hypothetical protein CLOBOL_02576 [Clostridium bolteae ATCC
           BAA-613]
          Length = 347

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 5/131 (3%)

Query: 9   PIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           P+   +   + + +RM+   + ++N    +KY WA   Y  A NN W+P E+ +  DL  
Sbjct: 8   PLFNPQGDTDKNSRRMIGGNTTNLNDFNNMKYTWASSWYRQAMNNFWIPEEINLSADLKD 67

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           +K+   LT  ER    + L F    +S+   N+   I ++++  E    L  Q F+EAVH
Sbjct: 68  YKN---LTAAERTAYDKILSFLVFLDSIQTANLP-CIAQYITANEVNLCLTIQGFQEAVH 123

Query: 128 SHTFQYIITSL 138
           S ++ Y++ S+
Sbjct: 124 SQSYSYMLDSI 134


>gi|225677302|ref|ZP_03788281.1| ribonucleotide-diphosphate reductase beta [Wolbachia endosymbiont
           of Muscidifurax uniraptor]
 gi|225590665|gb|EEH11913.1| ribonucleotide-diphosphate reductase beta [Wolbachia endosymbiont
           of Muscidifurax uniraptor]
          Length = 329

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 70/134 (52%), Gaps = 5/134 (3%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA++ +L     HW+P EVP+ DD+  WK+K  L+  E+ ++ +   FF  ++ +
Sbjct: 12  PFNYPWAYDAWLQQQRIHWIPEEVPLADDVKDWKTK--LSSVEKNLLTQIFRFFTQAD-I 68

Query: 96  VANNIVLAIYRHLSNP-ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPS 154
             NN  +  Y ++  P E    L   +  E +H   + Y++ ++G+ E E +  + +  +
Sbjct: 69  EVNNCYMRHYSNIFKPTEICMMLASFSNMETIHIAAYSYLLDTIGMPESE-YQAFLKYDA 127

Query: 155 ITAKANWALQYTQT 168
           +  K  + L++ ++
Sbjct: 128 MRKKYEYMLEFEES 141


>gi|187932511|ref|YP_001884520.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           botulinum B str. Eklund 17B]
 gi|187720664|gb|ACD21885.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum B str. Eklund 17B]
          Length = 344

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 62/118 (52%), Gaps = 5/118 (4%)

Query: 22  KRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           KR++N  + ++N    +KY WA + Y    NN W+P E+ +  DL  +K    L  DER 
Sbjct: 20  KRVINGNTTNLNDFNNMKYTWASDWYRQGMNNFWIPEEINLAQDLKDYKK---LLPDERT 76

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
              + L F    +S+   N+   I  +++  E    L  Q+F+EAVHS ++ Y++ S+
Sbjct: 77  AYDKILSFLIFLDSIQTANLS-NINSYITASEINLCLTIQSFQEAVHSQSYSYMLDSI 133


>gi|114799612|ref|YP_759103.1| ribonucleotide-diphosphate reductase subunit beta [Hyphomonas
           neptunium ATCC 15444]
 gi|114739786|gb|ABI77911.1| ribonucleoside-diphosphate reductase, beta subunit [Hyphomonas
           neptunium ATCC 15444]
          Length = 345

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 5/135 (3%)

Query: 32  NQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFAS 91
           N   P +Y WA+E +      HWMP EVP+ +D   W  K  L+D ER ++ +   FF  
Sbjct: 16  NAYKPFRYPWAYEFWKKQQQVHWMPEEVPLGEDCKDWAVK--LSDAERNLLTQIFRFFTQ 73

Query: 92  SESLVANNIVLAIYRHLSNP-ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
           S+  V  N  +  Y  L  P E    L   +  E +H   +  ++ ++G+ + E F+ + 
Sbjct: 74  SDVEVGAN-YMEHYMPLFKPVEVSMMLASFSNMETIHVAAYALLLETIGMPDSE-FSAFM 131

Query: 151 EVPSITAKANWALQY 165
           E   + AK ++  Q+
Sbjct: 132 EYKEMAAKHDYLGQF 146


>gi|167756571|ref|ZP_02428698.1| hypothetical protein CLORAM_02108 [Clostridium ramosum DSM 1402]
 gi|237733862|ref|ZP_04564343.1| ribonucleotide-diphosphate reductase subunit beta [Mollicutes
           bacterium D7]
 gi|167702746|gb|EDS17325.1| hypothetical protein CLORAM_02108 [Clostridium ramosum DSM 1402]
 gi|229382943|gb|EEO33034.1| ribonucleotide-diphosphate reductase subunit beta [Coprobacillus
           sp. D7]
          Length = 346

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 66/123 (53%), Gaps = 5/123 (4%)

Query: 17  VNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           ++V  +RM+N  + ++N    +KY W  + Y  A NN W+P E+ +  D+  ++    L+
Sbjct: 15  IDVRKRRMINGNTTNLNDFNNMKYQWVSDWYRQAMNNFWIPEEINLTQDIRDYRL---LS 71

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           + ER    + L F    +SL   N+   I  +++  E    L  QAF+EAVHS ++ Y++
Sbjct: 72  EAERTAYDKILSFLVFLDSLQTANLP-NIGEYITANEINLCLTIQAFQEAVHSQSYSYML 130

Query: 136 TSL 138
            S+
Sbjct: 131 DSI 133


>gi|326792202|ref|YP_004310023.1| ribonucleotide reductase [Clostridium lentocellum DSM 5427]
 gi|326542966|gb|ADZ84825.1| ribonucleotide reductase [Clostridium lentocellum DSM 5427]
          Length = 342

 Score = 59.3 bits (142), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 64/117 (54%), Gaps = 6/117 (5%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA   Y +  NN W+P E+ + +D+   K    LTD ER    + + F    +S+ 
Sbjct: 32  IKYDWAQTLYRTMLNNFWIPEEIALNEDV---KGFPFLTDGERHAFDKIIAFLNFLDSIQ 88

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELFNMYRE 151
           + N+   + R+++ PE    L  QAF+E +H+ ++ YI+ ++   +   ++++ +RE
Sbjct: 89  SENLP-HLSRYITAPEVASLLNIQAFQEEIHAQSYSYILDTVTNPVTRDKIYDQWRE 144


>gi|56416698|ref|YP_153772.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           marginale str. St. Maries]
 gi|254994906|ref|ZP_05277096.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           marginale str. Mississippi]
 gi|255003042|ref|ZP_05278006.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           marginale str. Puerto Rico]
 gi|255004164|ref|ZP_05278965.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           marginale str. Virginia]
 gi|56387930|gb|AAV86517.1| ribonuceoside-diphosphate reductase beta chain [Anaplasma marginale
           str. St. Maries]
          Length = 324

 Score = 58.9 bits (141), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 60/111 (54%), Gaps = 6/111 (5%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA++ +L     HW+P EVP+ DD+  WK+K  L++ E+ ++ +   FF  ++ +
Sbjct: 12  PFYYPWAYDAWLCQQRIHWIPEEVPLADDVQDWKTK--LSEQEKNLLVQIFRFFTQAD-I 68

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFE--EAVHSHTFQYIITSLGLDEGE 144
             NN  +  Y ++  P     ++  AF   E VH   + Y++ ++G+ E E
Sbjct: 69  EVNNCYMKHYSNIFKP-TEICMMLSAFSNMETVHIAAYSYLLDTIGMPEVE 118


>gi|329113329|ref|ZP_08242110.1| Ribonucleoside-diphosphate reductase subunit beta [Acetobacter
           pomorum DM001]
 gi|326697154|gb|EGE48814.1| Ribonucleoside-diphosphate reductase subunit beta [Acetobacter
           pomorum DM001]
          Length = 339

 Score = 58.9 bits (141), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 15/144 (10%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA++ +L+    HW+P EVP+ DD+  W     L + E+ ++ +   FF  S+  
Sbjct: 27  PFRYPWAYDAWLTQQRLHWLPEEVPLADDVKDW--HRVLNEGEQHLVTQIFRFFTQSDVE 84

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFE--EAVHSHTFQYIITSLGLDEGEL--FNMYRE 151
           V NN  +  Y  +  P     ++  AF   E +H   + Y++ +LG+ E E   F  Y+E
Sbjct: 85  V-NNCYMKHYSRVFKP-TEVLMMLSAFSNIETIHIAAYSYLLDTLGMPETEYSAFLKYKE 142

Query: 152 VPSITAKANWALQYTQTLSSPSFH 175
           +            Y QT +  S H
Sbjct: 143 MKD-------KYDYMQTFTVDSKH 159


>gi|258542157|ref|YP_003187590.1| ribonucleotide-diphosphate reductase subunit beta [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256633235|dbj|BAH99210.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256636294|dbj|BAI02263.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-03]
 gi|256639347|dbj|BAI05309.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-07]
 gi|256642403|dbj|BAI08358.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-22]
 gi|256645458|dbj|BAI11406.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-26]
 gi|256648511|dbj|BAI14452.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-32]
 gi|256651564|dbj|BAI17498.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256654555|dbj|BAI20482.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-12]
          Length = 339

 Score = 58.9 bits (141), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 15/144 (10%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA++ +L+    HW+P EVP+ DD+  W     L + E+ ++ +   FF  S+  
Sbjct: 27  PFRYPWAYDAWLTQQRLHWLPEEVPLADDVKDW--HRVLNEGEQHLVTQIFRFFTQSDVE 84

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFE--EAVHSHTFQYIITSLGLDEGEL--FNMYRE 151
           V NN  +  Y  +  P     ++  AF   E +H   + Y++ +LG+ E E   F  Y+E
Sbjct: 85  V-NNCYMKHYSRVFKP-TEVLMMLSAFSNIETIHIAAYSYLLDTLGMPETEYSAFLKYKE 142

Query: 152 VPSITAKANWALQYTQTLSSPSFH 175
           +            Y QT +  S H
Sbjct: 143 MKD-------KYDYMQTFTVDSKH 159


>gi|317062933|ref|ZP_07927418.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           ulcerans ATCC 49185]
 gi|313688609|gb|EFS25444.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           ulcerans ATCC 49185]
          Length = 353

 Score = 58.9 bits (141), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 7/140 (5%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA + Y +   N W+P ++ +  D   +K+   LTD E+      L F    +S+ 
Sbjct: 43  VKYQWANQLYRTMMGNFWIPEKIDLTQDKNDYKN---LTDQEKEAYDGILSFLIFLDSIQ 99

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPS 154
            NNI   +  +++ PE    L  Q F+EA+HS ++QYII S+   E    +++ +RE   
Sbjct: 100 TNNIP-NVCDYITAPEINLILSIQTFQEAIHSQSYQYIIESILPKEIRNSIYDKWREDKI 158

Query: 155 ITAKANW-ALQYTQTLSSPS 173
           +  +  + A  Y + L  P+
Sbjct: 159 LFERNKYIAEMYQKFLEEPN 178


>gi|222475064|ref|YP_002563479.1| ribonuceoside-diphosphate reductase beta chain (nrdB) [Anaplasma
           marginale str. Florida]
 gi|222419200|gb|ACM49223.1| ribonuceoside-diphosphate reductase beta chain (nrdB) [Anaplasma
           marginale str. Florida]
          Length = 343

 Score = 58.9 bits (141), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 60/111 (54%), Gaps = 6/111 (5%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA++ +L     HW+P EVP+ DD+  WK+K  L++ E+ ++ +   FF  ++ +
Sbjct: 31  PFYYPWAYDAWLCQQRIHWIPEEVPLADDVQDWKTK--LSEQEKNLLVQIFRFFTQAD-I 87

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFE--EAVHSHTFQYIITSLGLDEGE 144
             NN  +  Y ++  P     ++  AF   E VH   + Y++ ++G+ E E
Sbjct: 88  EVNNCYMKHYSNIFKP-TEICMMLSAFSNMETVHIAAYSYLLDTIGMPEVE 137


>gi|257468678|ref|ZP_05632772.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium
           ulcerans ATCC 49185]
          Length = 348

 Score = 58.9 bits (141), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 7/140 (5%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA + Y +   N W+P ++ +  D   +K+   LTD E+      L F    +S+ 
Sbjct: 38  VKYQWANQLYRTMMGNFWIPEKIDLTQDKNDYKN---LTDQEKEAYDGILSFLIFLDSIQ 94

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPS 154
            NNI   +  +++ PE    L  Q F+EA+HS ++QYII S+   E    +++ +RE   
Sbjct: 95  TNNIP-NVCDYITAPEINLILSIQTFQEAIHSQSYQYIIESILPKEIRNSIYDKWREDKI 153

Query: 155 ITAKANW-ALQYTQTLSSPS 173
           +  +  + A  Y + L  P+
Sbjct: 154 LFERNKYIAEMYQKFLEEPN 173


>gi|269958883|ref|YP_003328672.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           centrale str. Israel]
 gi|269848714|gb|ACZ49358.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           centrale str. Israel]
          Length = 332

 Score = 58.9 bits (141), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 60/111 (54%), Gaps = 6/111 (5%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA++ +L     HW+P EVP+ DD+  WK+K  L++ E+ ++ +   FF  ++ +
Sbjct: 20  PFYYPWAYDAWLCQQRIHWIPEEVPLADDVQDWKTK--LSEQEKNLLVQIFRFFTQAD-I 76

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFE--EAVHSHTFQYIITSLGLDEGE 144
             NN  +  Y ++  P     ++  AF   E VH   + Y++ ++G+ E E
Sbjct: 77  EVNNCYMKHYSNIFKP-TEICMMLSAFSNMETVHIAAYSYLLDTIGMPEVE 126


>gi|326403282|ref|YP_004283363.1| ribonucleoside-diphosphate reductase beta subunit [Acidiphilium
           multivorum AIU301]
 gi|325050143|dbj|BAJ80481.1| ribonucleoside-diphosphate reductase beta subunit [Acidiphilium
           multivorum AIU301]
          Length = 338

 Score = 58.9 bits (141), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 8/121 (6%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA+E +L+    HW+P EVP+ DD+  W     LT  ER ++ +   FF  ++  
Sbjct: 31  PFRYPWAYEAWLTQQRVHWLPEEVPLADDVKDW--HRNLTPGERNLLTQIFRFFTQADVE 88

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFE--EAVHSHTFQYIITSLGLDEGEL--FNMYRE 151
           V NN  +  Y  +  P     ++  AF   E +H   + +++ ++G+ E E   F  Y+E
Sbjct: 89  V-NNCYMKHYSQVFKP-TEVLMMLSAFSNIETIHIAAYSHLLDTIGMPEVEYSAFLKYKE 146

Query: 152 V 152
           +
Sbjct: 147 M 147


>gi|237678830|emb|CAQ57557.1| NrdB protein [Bradyrhizobium elkanii]
          Length = 360

 Score = 58.9 bits (141), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 6/130 (4%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           +Y WA+E +      HWM  EVP+  DL  W S   +TD ER ++ +   FF  S+  V 
Sbjct: 36  RYAWAYEFWKRQQQTHWMGEEVPLGADLKDWASDR-VTDSERALLTQIFRFFTQSDIEVG 94

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFE--EAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           +N  L  Y  +  P   Q ++  AF   E VH   +  ++ +LG+ + E F  +R    +
Sbjct: 95  DNY-LKRYIPIFQPLTVQMMM-AAFTNMETVHIDAYALLLKTLGMPKTE-FEAFRGYSEM 151

Query: 156 TAKANWALQY 165
            AKA++  ++
Sbjct: 152 RAKADYMHEF 161


>gi|148259750|ref|YP_001233877.1| ribonucleotide-diphosphate reductase subunit beta [Acidiphilium
           cryptum JF-5]
 gi|146401431|gb|ABQ29958.1| Ribonucleoside-diphosphate reductase [Acidiphilium cryptum JF-5]
          Length = 338

 Score = 58.5 bits (140), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 8/121 (6%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA+E +L+    HW+P EVP+ DD+  W     LT  ER ++ +   FF  ++  
Sbjct: 31  PFRYPWAYEAWLTQQRVHWLPEEVPLADDVKDW--HRNLTPGERNLLTQIFRFFTQADVE 88

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFE--EAVHSHTFQYIITSLGLDEGEL--FNMYRE 151
           V NN  +  Y  +  P     ++  AF   E +H   + +++ ++G+ E E   F  Y+E
Sbjct: 89  V-NNCYMKHYSQVFKP-TEVLMMLSAFSNIETIHIAAYSHLLDTIGMPEVEYSAFLKYKE 146

Query: 152 V 152
           +
Sbjct: 147 M 147


>gi|47213103|emb|CAF89523.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 407

 Score = 58.5 bits (140), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 6/116 (5%)

Query: 53  HWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPE 112
           H +  +V +  DL  W+S   L DDER  I   L FFA+S+ +V  N+V    + +   E
Sbjct: 132 HLLWLQVDLSKDLQHWES---LKDDERFFISHVLAFFAASDGIVNENLVERFTQEVQVTE 188

Query: 113 CRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
            R +   Q   E +HS  +  +I +   +  E   LFN    +P +  KA+WAL +
Sbjct: 189 ARCFYGFQIAMENIHSEMYSLLIDTYIKEPSEREYLFNAIETLPCVKKKADWALNW 244


>gi|197103810|ref|YP_002129187.1| ribonucleoside-diphosphate reductase, beta subunit
           [Phenylobacterium zucineum HLK1]
 gi|196477230|gb|ACG76758.1| ribonucleoside-diphosphate reductase, beta subunit
           [Phenylobacterium zucineum HLK1]
          Length = 350

 Score = 58.5 bits (140), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 2/110 (1%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA++ +      HWMP E+P+ +DL  W SK  L D ER ++ +   FF  S+  
Sbjct: 24  PFRYPWAYDYWKKQQQVHWMPEEIPLGEDLKDWASK--LNDRERNLLTQIFRFFTQSDVE 81

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL 145
           V +N +    R     E +  L   +  E +H   +  ++ ++G+ + E 
Sbjct: 82  VNDNYMERYARVFKPTEVKMMLAAFSNMETIHIAAYALLLETIGMPDAEF 131


>gi|149194868|ref|ZP_01871962.1| ribonucleotide-diphosphate [Caminibacter mediatlanticus TB-2]
 gi|149135027|gb|EDM23509.1| ribonucleotide-diphosphate [Caminibacter mediatlanticus TB-2]
          Length = 346

 Score = 58.5 bits (140), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 3/114 (2%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           L Y WA+  +     N W P EV + +D   ++    L   E+ M  + L      +S+ 
Sbjct: 35  LSYPWAYNLWEMMLANTWFPREVDLTEDARQYRQ---LLPAEKRMYDKALSQLIFMDSIQ 91

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
            NN    +   ++ PE    L+RQAFEEA+HS ++  ++ S+ L+  E++ M+R
Sbjct: 92  TNNTPDHVNPWITAPEVNMCLVRQAFEEALHSQSYAVMVDSISLNTDEIYEMWR 145


>gi|193784694|dbj|BAG53847.1| unnamed protein product [Homo sapiens]
 gi|193787382|dbj|BAG52588.1| unnamed protein product [Homo sapiens]
          Length = 297

 Score = 58.5 bits (140), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 6/123 (4%)

Query: 46  YLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIY 105
           Y  A  + W   EV +  D+  W+S   L  +ER  I   L FFA+S+ +V  N+V    
Sbjct: 2   YKKAEASFWTAEEVDLSKDIQHWES---LKPEERYFISHVLAFFAASDGIVNENLVERFS 58

Query: 106 RHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWA 162
           + +   E R +   Q   E +HS  +  +I +   D  E   LFN    +P +  KA+WA
Sbjct: 59  QEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLFNAIETMPCVKKKADWA 118

Query: 163 LQY 165
           L++
Sbjct: 119 LRW 121


>gi|315635423|ref|ZP_07890689.1| ribonucleotide-diphosphate reductase beta subunit [Arcobacter
           butzleri JV22]
 gi|315480181|gb|EFU70848.1| ribonucleotide-diphosphate reductase beta subunit [Arcobacter
           butzleri JV22]
          Length = 339

 Score = 58.5 bits (140), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 77/159 (48%), Gaps = 4/159 (2%)

Query: 14  EKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
           + + +++D+R+    SD +     +KY WA   + +   N W P EV M  D   +K   
Sbjct: 10  DSKESLNDRRVFGGNSDGMINFTRMKYQWALNLWDTMEANTWFPREVQMTGDAKDYKF-- 67

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
            LT  E+ M    L      +SL  NN++  I  +++ PE    L RQ++EEA HS ++ 
Sbjct: 68  -LTPAEKRMYDLVLSQLIFMDSLQTNNLMDNINPYITAPEINACLARQSYEEANHSKSYA 126

Query: 133 YIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSS 171
            ++ S+  +   +++M++    +  K  +  +  + LS 
Sbjct: 127 VMVESISDNTDLIYDMWKNDAKLREKNTYIAEVYKNLSG 165


>gi|157736292|ref|YP_001488975.1| ribonucleotide-diphosphate reductase subunit beta [Arcobacter
           butzleri RM4018]
 gi|157698146|gb|ABV66306.1| ribonucleoside-diphosphate reductase, beta chain [Arcobacter
           butzleri RM4018]
          Length = 339

 Score = 58.5 bits (140), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 77/159 (48%), Gaps = 4/159 (2%)

Query: 14  EKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
           + + +++D+R+    SD +     +KY WA   + +   N W P EV M  D   +K   
Sbjct: 10  DSKESLNDRRVFGGNSDGMINFTRMKYQWALNLWDTMEANTWFPREVQMTGDAKDYKF-- 67

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
            LT  E+ M    L      +SL  NN++  I  +++ PE    L RQ++EEA HS ++ 
Sbjct: 68  -LTPAEKRMYDLVLSQLIFMDSLQTNNLMDNINPYITAPEINACLARQSYEEANHSKSYA 126

Query: 133 YIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSS 171
            ++ S+  +   +++M++    +  K  +  +  + LS 
Sbjct: 127 VMVESISDNTDLIYDMWKNDAKLREKNTYIAEVYKNLSG 165


>gi|87198296|ref|YP_495553.1| ribonucleotide-diphosphate reductase subunit beta [Novosphingobium
           aromaticivorans DSM 12444]
 gi|87133977|gb|ABD24719.1| Ribonucleoside-diphosphate reductase [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 351

 Score = 58.2 bits (139), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 10/147 (6%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +L AR   N   P +Y WA+E +      HWMP EVP+ +D   W  K  +++ ER ++ 
Sbjct: 3   LLEAR---NTYKPFEYPWAYEFWKRQQQIHWMPEEVPLGEDCRDWAQK--ISEHERNLLT 57

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
           +   FF  ++  V N       R     E +  L   +  E VH   + +++ ++G+ E 
Sbjct: 58  QIFRFFTQADVEVQNCYHEQYGRVFKPTEVKMMLAAFSNMETVHIAAYSHLLDTIGMPES 117

Query: 144 ELFNMYREVPSITAKANWALQYTQTLS 170
           E + M+ E   + AK +    Y QT  
Sbjct: 118 E-YGMFLEYEELKAKHD----YLQTFG 139


>gi|58578998|ref|YP_197210.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia
           ruminantium str. Welgevonden]
 gi|58417624|emb|CAI26828.1| Ribonucleoside-diphosphate reductase beta chain [Ehrlichia
           ruminantium str. Welgevonden]
          Length = 329

 Score = 58.2 bits (139), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 59/111 (53%), Gaps = 6/111 (5%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA++ +L     HW+P EVP+ DD+  WK+   L+D E+ ++ +   FF  ++ +
Sbjct: 17  PFNYPWAYDAWLCQQRIHWLPEEVPLADDVQDWKTV--LSDKEKNLLVQIFRFFTQAD-I 73

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFE--EAVHSHTFQYIITSLGLDEGE 144
             NN  +  Y ++  P     ++  AF   E +H   + Y++ ++G+ E E
Sbjct: 74  EVNNCYMKHYSNIFKP-TEICMMLSAFSNMETIHIAAYSYLLDTIGMPEIE 123


>gi|58617056|ref|YP_196255.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia
           ruminantium str. Gardel]
 gi|58416668|emb|CAI27781.1| Ribonucleoside-diphosphate reductase beta chain [Ehrlichia
           ruminantium str. Gardel]
          Length = 329

 Score = 58.2 bits (139), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 59/111 (53%), Gaps = 6/111 (5%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA++ +L     HW+P EVP+ DD+  WK+   L+D E+ ++ +   FF  ++ +
Sbjct: 17  PFNYPWAYDAWLCQQRIHWLPEEVPLADDVQDWKTV--LSDKEKNLLVQIFRFFTQAD-I 73

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFE--EAVHSHTFQYIITSLGLDEGE 144
             NN  +  Y ++  P     ++  AF   E +H   + Y++ ++G+ E E
Sbjct: 74  EVNNCYMKHYSNIFKP-TEICMMLSAFSNMETIHIAAYSYLLDTIGMPEIE 123


>gi|57239055|ref|YP_180191.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia
           ruminantium str. Welgevonden]
 gi|15811135|gb|AAL08816.1|AF308664_1 hypothetical ribonucleoside reductase beta chain [Ehrlichia
           ruminantium]
 gi|57161134|emb|CAH58047.1| putative ribonucleoside-diphosphate reductase beta chain [Ehrlichia
           ruminantium str. Welgevonden]
          Length = 324

 Score = 58.2 bits (139), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 59/111 (53%), Gaps = 6/111 (5%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA++ +L     HW+P EVP+ DD+  WK+   L+D E+ ++ +   FF  ++ +
Sbjct: 12  PFNYPWAYDAWLCQQRIHWLPEEVPLADDVQDWKTV--LSDKEKNLLVQIFRFFTQAD-I 68

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFE--EAVHSHTFQYIITSLGLDEGE 144
             NN  +  Y ++  P     ++  AF   E +H   + Y++ ++G+ E E
Sbjct: 69  EVNNCYMKHYSNIFKP-TEICMMLSAFSNMETIHIAAYSYLLDTIGMPEIE 118


>gi|15079087|ref|NP_149839.1| 376L [Invertebrate iridescent virus 6]
 gi|82012049|sp|Q91FE8|RIR2_IIV6 RecName: Full=Probable ribonucleoside-diphosphate reductase small
           subunit 376L; AltName: Full=Ribonucleotide reductase
           small subunit
 gi|15042456|gb|AAK82236.1|AF303741_377 376L [Invertebrate iridescent virus 6]
          Length = 360

 Score = 58.2 bits (139), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 55/123 (44%), Gaps = 4/123 (3%)

Query: 32  NQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFAS 91
           N   P  Y   + K+     +HW+P+EVPM DD+  W  KN L D++R  +     FF  
Sbjct: 8   NYYKPFTYPEFYNKWDKHEKSHWLPSEVPMHDDVNDW--KNRLNDNQRDFLTNIFRFFTQ 65

Query: 92  SESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL--FNMY 149
            +  VA+            PE    +   A  E VH   + Y++ +LG+ E     F MY
Sbjct: 66  GDVDVASAYYTQYLPFFKLPEVTMMMGGFAGREGVHIDAYSYLLETLGMPEATYKEFLMY 125

Query: 150 REV 152
            E+
Sbjct: 126 EEM 128


>gi|322500276|emb|CBZ35354.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 196

 Score = 58.2 bits (139), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 64/150 (42%), Gaps = 12/150 (8%)

Query: 4   NTGLSPIQAGEKRVNVDD-KRMLNARSDVNQ--------LLPLKYGWAWEKYLSACNNHW 54
           N  + P+ AG + +  D      NA  +  Q        L P++Y   W KY    +  W
Sbjct: 41  NLVMKPVAAGAEVLTADKVAEGTNAEEEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIW 100

Query: 55  MPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECR 114
              E+ + +D+  W +   L D ER  IK  L FFA S+ +V  N+       +  PE R
Sbjct: 101 TVEEIDLGNDMKDWAT---LNDGERHFIKHVLAFFAGSDGIVIENLAQRFMSDVKVPEAR 157

Query: 115 QYLLRQAFEEAVHSHTFQYIITSLGLDEGE 144
            +   Q   E +HS T+  ++ +   D  E
Sbjct: 158 AFYGFQLMMENIHSETYSVLLDTYITDSEE 187


>gi|21492474|ref|NP_659593.1| Ribonucleotide reductase, small subunit [Sheeppox virus]
          Length = 321

 Score = 58.2 bits (139), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 59/132 (44%), Gaps = 6/132 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+ Y   W  Y  A  + W   EV +  DL+ WK    L ++E+  IK  L FFA+S+
Sbjct: 14  VFPILYKEIWVMYKKAVASFWTVDEVDLSKDLSDWKK---LNNEEQYFIKNILAFFAASD 70

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+    Y  +   E R +   Q   E +HS  +  +I +      E   LFN   
Sbjct: 71  GIVNENLAERFYSEVQWSEARCFYGFQIAMENIHSEMYSLLIDTYISSTKEKEYLFNAIE 130

Query: 151 EVPSITAKANWA 162
            +  I  K+ WA
Sbjct: 131 TMDFIKKKSEWA 142


>gi|288817346|ref|YP_003431693.1| ribonucleotide reductase beta subunit [Hydrogenobacter thermophilus
           TK-6]
 gi|288786745|dbj|BAI68492.1| ribonucleotide reductase beta subunit [Hydrogenobacter thermophilus
           TK-6]
 gi|308750953|gb|ADO44436.1| ribonucleotide reductase [Hydrogenobacter thermophilus TK-6]
          Length = 342

 Score = 58.2 bits (139), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 73/133 (54%), Gaps = 6/133 (4%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLS-ACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           K +    +++ +L  +KY WA++ Y +    N W+P E+PM +D   ++    L+  E+ 
Sbjct: 19  KVIFGNPTNIMELNNVKYQWAFDLYKTMGFTNFWVPEEIPMHEDKKQYEK--DLSPYEKR 76

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
             +  L F  + +S   N ++    R+++ PE    L  Q F+EA+HS+++Q+I+ S+  
Sbjct: 77  AYEMVLSFLIALDSYQVN-MLKEFARYITAPELVMALTSQEFQEALHSYSYQFILESVVE 135

Query: 141 DE--GELFNMYRE 151
            +   E++N +R+
Sbjct: 136 PQVADEIYNYWRQ 148


>gi|291412327|ref|XP_002722439.1| PREDICTED: ribonucleotide reductase M2 polypeptide [Oryctolagus
           cuniculus]
          Length = 400

 Score = 58.2 bits (139), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 7/130 (5%)

Query: 39  YGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN 98
           YG  W +      + W   EV +  D+  W++   L ++ER  I   L FFA+S+ +V  
Sbjct: 99  YG-IWTRNKKGEASFWTAEEVDLSKDIQHWEA---LKEEERYFISHVLAFFAASDGIVNE 154

Query: 99  NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSI 155
           N+V    + +   E R +   Q   E +HS  +  +I +   D  E   LFN    +P +
Sbjct: 155 NLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLFNAIETMPCV 214

Query: 156 TAKANWALQY 165
             KA+WAL++
Sbjct: 215 KKKADWALRW 224


>gi|210631890|ref|ZP_03297102.1| hypothetical protein COLSTE_00992 [Collinsella stercoris DSM 13279]
 gi|210159815|gb|EEA90786.1| hypothetical protein COLSTE_00992 [Collinsella stercoris DSM 13279]
          Length = 352

 Score = 57.8 bits (138), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 5/131 (3%)

Query: 9   PIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           P+   +  ++V D+RM+   + ++N    +KY W    Y  A NN W+P E+ +  D+  
Sbjct: 13  PLFNPDGDLDVRDRRMIGGNTTNLNDFNNMKYPWVSSWYRQAMNNFWIPEEINLTQDV-- 70

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
            K    LT  ER    + L F    +SL + N+   I  +++  E    L  QAF+E+VH
Sbjct: 71  -KDYPRLTAAERAAYDKILSFLVFLDSLQSANLP-NIAEYITANEVNLCLSIQAFQESVH 128

Query: 128 SHTFQYIITSL 138
           S ++ Y++ ++
Sbjct: 129 SQSYSYMLDTI 139


>gi|319936387|ref|ZP_08010803.1| ribonucleotide-diphosphate reductase subunit beta [Coprobacillus
           sp. 29_1]
 gi|319808502|gb|EFW05054.1| ribonucleotide-diphosphate reductase subunit beta [Coprobacillus
           sp. 29_1]
          Length = 346

 Score = 57.8 bits (138), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 5/123 (4%)

Query: 17  VNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           ++V  +RM+N  + ++N    +KY W  + Y  A NN W+P E+ +  D+   K    L 
Sbjct: 15  IDVRKRRMINGNTTNLNDFNNMKYNWVSDWYRQAMNNFWIPEEINLTQDI---KDYRLLN 71

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           + E+    + L F    +SL   N+   +  +++  E    L  QAF+EAVHS ++ Y++
Sbjct: 72  EHEKTAYDKILSFLVFLDSLQTANLP-NVGEYITANEINLCLTIQAFQEAVHSQSYSYML 130

Query: 136 TSL 138
            S+
Sbjct: 131 DSI 133


>gi|58584525|ref|YP_198098.1| ribonucleotide-diphosphate reductase subunit beta [Wolbachia
           endosymbiont strain TRS of Brugia malayi]
 gi|58418841|gb|AAW70856.1| Ribonucleotide reductase, beta subunit [Wolbachia endosymbiont
           strain TRS of Brugia malayi]
          Length = 331

 Score = 57.8 bits (138), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 69/134 (51%), Gaps = 5/134 (3%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA++ +L     HW+P EVP+ DD+  WK K  L + E+ ++ +   FF  ++ +
Sbjct: 12  PFNYPWAYDAWLQQQRIHWIPEEVPLADDVKDWKIK--LLNVEKNLLTQIFRFFTQAD-I 68

Query: 96  VANNIVLAIYRHLSNP-ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPS 154
             NN  +  Y ++  P E    L   +  E +H   + Y++ ++G+ E E +  + +  +
Sbjct: 69  EVNNCYMRHYSNIFKPTEICMMLASFSNMETIHIAAYSYLLDTIGMPESE-YQAFLKYDA 127

Query: 155 ITAKANWALQYTQT 168
           +  K  + L++ ++
Sbjct: 128 MRKKYEYMLEFEES 141


>gi|160915703|ref|ZP_02077911.1| hypothetical protein EUBDOL_01712 [Eubacterium dolichum DSM 3991]
 gi|158432179|gb|EDP10468.1| hypothetical protein EUBDOL_01712 [Eubacterium dolichum DSM 3991]
          Length = 353

 Score = 57.8 bits (138), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 69/138 (50%), Gaps = 5/138 (3%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           A N    P+      ++V  ++M+N  + ++N    +KY WA + Y  A NN W+P E+ 
Sbjct: 7   AMNLQRKPLFNEHGDIDVHLRKMINGNTTNLNDFNHMKYTWASDWYRQAMNNFWIPEEIN 66

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           +  D+   K    L+  E+    + L F    +S+   N+   I  +++  E    L  Q
Sbjct: 67  LNQDV---KDYRKLSKAEKDAYDKTLSFLIFLDSIQTANLP-NIGEYITANEVNLCLTIQ 122

Query: 121 AFEEAVHSHTFQYIITSL 138
           AF+EAVHS ++ Y++ S+
Sbjct: 123 AFQEAVHSQSYSYMLDSI 140


>gi|301097698|ref|XP_002897943.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
           infestans T30-4]
 gi|262106388|gb|EEY64440.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
           infestans T30-4]
          Length = 360

 Score = 57.4 bits (137), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 3/122 (2%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++    W+ Y  A  + W   E+ +  DL  W     LTD+ER  IK  L FFA+S+
Sbjct: 66  LFPIQEHDVWQMYKKAEASFWTAEELDLVHDLNDWAK---LTDNERHFIKHVLAFFAASD 122

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVP 153
            +V  N+ +     +  PE R +   Q   E +HS  +  +I +   D  E  ++ R + 
Sbjct: 123 GIVNENLAMNFSNEVQIPEARCFYGFQIAIENIHSEVYSLLIDTYIKDAVEKDHLLRAIE 182

Query: 154 SI 155
           +I
Sbjct: 183 TI 184


>gi|188588149|ref|YP_001919720.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           botulinum E3 str. Alaska E43]
 gi|251778737|ref|ZP_04821657.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
 gi|188498430|gb|ACD51566.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum E3 str. Alaska E43]
 gi|243083052|gb|EES48942.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
          Length = 344

 Score = 57.4 bits (137), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 5/118 (4%)

Query: 22  KRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           KR++N  + ++N    +KY WA + Y    NN W+P E+ +  DL  +K    L  +ER 
Sbjct: 20  KRVINGNTTNLNDFNNMKYTWASDWYRQGMNNFWIPEEINLAQDLKDYKK---LLPEERT 76

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
              + L F    +S+   N+   I  +++  E    L  Q+F+EAVHS ++ Y++ S+
Sbjct: 77  AYDKILSFLIFLDSIQTANLS-NINSYITASEINLCLTIQSFQEAVHSQSYSYMLDSI 133


>gi|291461082|ref|ZP_06026838.2| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           periodonticum ATCC 33693]
 gi|291379059|gb|EFE86577.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           periodonticum ATCC 33693]
          Length = 348

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 11/132 (8%)

Query: 14  EKRVNVDDKRMLNAR-------SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           +K  N +    LNAR       +++  L  ++Y WA + Y +   N W+P +V +  D  
Sbjct: 8   KKLFNPEGDDTLNARKIIKGNSTNLFNLNNVRYQWANQLYRTMMANFWIPEKVDLTQDKN 67

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +++   LT  ER      L F    +S+  NNI   I  H++ PE    L  Q F+EA+
Sbjct: 68  DYEN---LTLPEREAYDGILSFLIFLDSIQTNNIP-NISDHVTAPEVNMLLAIQTFQEAI 123

Query: 127 HSHTFQYIITSL 138
           HS ++QYII S+
Sbjct: 124 HSQSYQYIIESI 135


>gi|294782021|ref|ZP_06747353.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 1_1_41FAA]
 gi|294481832|gb|EFG29601.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 1_1_41FAA]
          Length = 344

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 11/132 (8%)

Query: 14  EKRVNVDDKRMLNAR-------SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           +K  N +    LNAR       +++  L  ++Y WA + Y +   N W+P +V +  D  
Sbjct: 4   KKLFNPEGDDTLNARKIIKGNSTNLFNLNNVRYQWANQLYRTMMANFWIPEKVDLTQDKN 63

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +++   LT  ER      L F    +S+  NNI   I  H++ PE    L  Q F+EA+
Sbjct: 64  DYEN---LTLPEREAYDGILSFLIFLDSIQTNNIP-NISDHVTAPEVNMLLAIQTFQEAI 119

Query: 127 HSHTFQYIITSL 138
           HS ++QYII S+
Sbjct: 120 HSQSYQYIIESI 131


>gi|294463759|gb|ADE77404.1| unknown [Picea sitchensis]
          Length = 289

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 8/120 (6%)

Query: 58  EVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYL 117
           EV +  DL  W +   LT +E+  I   L FFA+S+ +V  N+     + +  PE R + 
Sbjct: 3   EVDLSQDLYQWVN---LTKNEKHFISHVLAFFAASDGIVLENLAGRFLKDVQIPEARAFY 59

Query: 118 LRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSF 174
             Q   E +HS  +  ++ +   D  E   LFN    +P +  KA WA+++ Q  SS SF
Sbjct: 60  GFQIAIENIHSEMYSLLLETYIRDSKEKARLFNAINTIPCVARKAEWAMRWIQ--SSGSF 117


>gi|27769295|gb|AAH42468.1| Similar to ribonucleotide reductase M2 polypeptide [Homo sapiens]
          Length = 285

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 6/111 (5%)

Query: 58  EVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYL 117
           EV +  DL  W   N L  DE+  I   L FFA+S+ +V  N+V    + +  PE R + 
Sbjct: 2   EVDLSKDLPHW---NKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFY 58

Query: 118 LRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
             Q   E VHS  +  +I +   D  +   LFN    +P +  KA+WAL++
Sbjct: 59  GFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRW 109


>gi|296227442|ref|XP_002759378.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
           isoform 2 [Callithrix jacchus]
          Length = 299

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 6/111 (5%)

Query: 58  EVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYL 117
           EV +  DL  W   N L  DE+  I   L FFA+S+ +V  N+V    + +  PE R + 
Sbjct: 16  EVDLSKDLPHW---NKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFY 72

Query: 118 LRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
             Q   E VHS  +  +I +   D  +   LFN    +P +  KA+WAL++
Sbjct: 73  GFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRW 123


>gi|330837704|ref|YP_004412345.1| ribonucleotide reductase [Spirochaeta coccoides DSM 17374]
 gi|329749607|gb|AEC02963.1| ribonucleotide reductase [Spirochaeta coccoides DSM 17374]
          Length = 360

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 5/131 (3%)

Query: 9   PIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           PI        +D +RM+   + ++N    LKYGW  + Y  A NN W+P E+ M  D+  
Sbjct: 21  PIFNEHGDTGLDKRRMVGGNTTNLNDFNNLKYGWTSDWYRQAMNNFWIPEEINMNTDVQD 80

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           ++    L+  E+    + L F    +S+   N+   + + ++  E    L  QAF+EA+H
Sbjct: 81  YRR---LSPAEKTAYDKILSFLIFLDSVQTANLP-NLAQFITANEVNLCLTIQAFQEAIH 136

Query: 128 SHTFQYIITSL 138
           S ++ Y++ ++
Sbjct: 137 SQSYSYMLDTI 147


>gi|38683666|gb|AAR26843.1| FirrV-1-A19 [Feldmannia irregularis virus a]
          Length = 342

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 6/135 (4%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
           +NQ    ++   +  Y       W   E+ + +D+A W   +  ++DE+  I   L FFA
Sbjct: 32  LNQKTEFEFADVYALYKKEIACFWTVEEIDLNEDVACW---DKCSEDEQRFIGHILAFFA 88

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
           S + +V  N+ +     +  P+ R +   Q   E++H  T+  +I +   D  +   M R
Sbjct: 89  SLDQIVMENVSVNFGDEIKIPQIRSHFAMQNAIESIHGETYALLIQTYIKDPEKQVTMLR 148

Query: 151 ---EVPSITAKANWA 162
              E+P IT KA W 
Sbjct: 149 SIQEMPIITKKAQWV 163


>gi|189184364|ref|YP_001938149.1| ribonucleotide-diphosphate reductase subunit beta [Orientia
           tsutsugamushi str. Ikeda]
 gi|189181135|dbj|BAG40915.1| ribonucleoside-diphosphate reductase beta chain [Orientia
           tsutsugamushi str. Ikeda]
          Length = 359

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 9/123 (7%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +LNAR       P  Y WA++ + +    HW+P EVP+ DD+  WK    LT  E+ ++ 
Sbjct: 18  LLNARPIYK---PFSYPWAYKAWHTQQKIHWLPEEVPLADDIKDWKY--NLTPGEKHLLT 72

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE--EAVHSHTFQYIITSLGLD 141
           +   FF  ++ +  NN  +  Y  +  P   Q +L  AF   E +H   + +++ ++G+ 
Sbjct: 73  QIFRFFTQAD-IEVNNCYMKHYARVFQPTEVQMML-SAFSNMETIHIAAYSHLLDTIGMP 130

Query: 142 EGE 144
           E E
Sbjct: 131 ETE 133


>gi|237738722|ref|ZP_04569203.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 2_1_31]
 gi|229423825|gb|EEO38872.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 2_1_31]
          Length = 344

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 11/132 (8%)

Query: 14  EKRVNVDDKRMLNAR-------SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           +K  N +    LNAR       +++  L  ++Y WA + Y +   N W+P +V +  D  
Sbjct: 4   KKLFNPEGDDTLNARKIIKGNSTNLFNLNNVRYQWANQLYRTMMANFWIPEKVDLTQDKN 63

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +++   LT  ER      L F    +S+  NNI   I  H++ PE    L  Q F+EA+
Sbjct: 64  DYEN---LTLPEREAYDGILSFLIFLDSIQTNNIP-NISDHVTAPEVNMLLAIQTFQEAI 119

Query: 127 HSHTFQYIITSL 138
           HS ++QYII S+
Sbjct: 120 HSQSYQYIIESI 131


>gi|114568952|ref|YP_755632.1| ribonucleotide-diphosphate reductase subunit beta [Maricaulis maris
           MCS10]
 gi|114339414|gb|ABI64694.1| Ribonucleoside-diphosphate reductase [Maricaulis maris MCS10]
          Length = 345

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 64/130 (49%), Gaps = 3/130 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA++ +      HWMP EVP+ +D   W +K  L D ER ++ +   FF  S+  
Sbjct: 20  PFRYPWAYDFWKKQQQVHWMPEEVPLGEDCKDWATK--LNDGERNLLTQIFRFFTQSDVE 77

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V +N +    R     E +  L   +  E +H   +  ++ ++G+ + E F+ + E  ++
Sbjct: 78  VNDNYMERYSRVFRPTEVKMMLASFSNMETIHIAAYALLLETIGMPDSE-FSAFMEYQAM 136

Query: 156 TAKANWALQY 165
             K ++  ++
Sbjct: 137 ADKHDYMQRF 146


>gi|289177076|ref|NP_001165949.1| ribonucleoside-diphosphate reductase subunit M2 B isoform 3 [Homo
           sapiens]
 gi|55631160|ref|XP_528204.1| PREDICTED: ribonucleotide reductase M2 B (TP53 inducible) isoform 3
           [Pan troglodytes]
 gi|42794058|dbj|BAD11774.1| p53-inducible ribonucleotide reductase small subunit 2 long form
           [Homo sapiens]
 gi|119612246|gb|EAW91840.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_a [Homo
           sapiens]
          Length = 299

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 6/111 (5%)

Query: 58  EVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYL 117
           EV +  DL  W   N L  DE+  I   L FFA+S+ +V  N+V    + +  PE R + 
Sbjct: 16  EVDLSKDLPHW---NKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFY 72

Query: 118 LRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
             Q   E VHS  +  +I +   D  +   LFN    +P +  KA+WAL++
Sbjct: 73  GFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRW 123


>gi|66802406|ref|XP_629985.1| ribonucleotide reductase-related [Dictyostelium discoideum AX4]
 gi|60463390|gb|EAL61578.1| ribonucleotide reductase-related [Dictyostelium discoideum AX4]
          Length = 257

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 15/140 (10%)

Query: 32  NQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFAS 91
           N++ PL     W+ Y     N W+  E+   DD   W+ K  LT+DER      L FF +
Sbjct: 80  NEISPLD---IWKMYKKTLANQWVVEEIESSDDGLDWEKK--LTNDERDFFSNVLAFFVA 134

Query: 92  SESLVANNIVLAIYRHLSN---PECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG---EL 145
           S  ++  N+     R +S    PE + +   Q   + +HS T+  +I +   D+    +L
Sbjct: 135 SCGIINKNL----NRFMSKVQIPEAKCFYNYQIHIKYLHSETYSLLIETCIKDKNIKDKL 190

Query: 146 FNMYREVPSITAKANWALQY 165
           FN    +P +  KA WAL++
Sbjct: 191 FNAIETIPCVKKKAEWALKW 210


>gi|302379704|ref|ZP_07268189.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia
           magna ACS-171-V-Col3]
 gi|302312611|gb|EFK94607.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia
           magna ACS-171-V-Col3]
          Length = 347

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 65/123 (52%), Gaps = 5/123 (4%)

Query: 17  VNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           + +  +R++N  + ++N    +KY W  E Y  A NN W+P E+ +  D+   K    L+
Sbjct: 16  IELSKRRIINGNTTNLNDFNNIKYSWTSEWYRQAMNNFWIPEEINLNQDI---KDYRNLS 72

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           +DE++   + L F    +SL    +   +  +++  E    L  QAF+E++HS ++ YI+
Sbjct: 73  EDEKIAYDKILSFLIYLDSLQTAQLP-NLEAYITANEINLCLSIQAFQESIHSQSYSYIL 131

Query: 136 TSL 138
            ++
Sbjct: 132 DTI 134


>gi|148284015|ref|YP_001248105.1| ribonucleotide-diphosphate reductase subunit beta [Orientia
           tsutsugamushi str. Boryong]
 gi|146739454|emb|CAM79093.1| ribonucleoside-diphosphate reductase beta chain [Orientia
           tsutsugamushi str. Boryong]
          Length = 329

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 9/123 (7%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +LNAR       P  Y WA++ + +    HW+P EVP+ DD+  WK    LT  E+ ++ 
Sbjct: 3   LLNARPIYK---PFSYPWAYKAWHTQQKIHWLPEEVPLADDIKDWKY--NLTPGEKHLLT 57

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE--EAVHSHTFQYIITSLGLD 141
           +   FF  ++ +  NN  +  Y  +  P   Q +L  AF   E +H   + +++ ++G+ 
Sbjct: 58  QIFRFFTQAD-IEVNNCYMKHYARVFQPTEVQMML-SAFSNMETIHIAAYSHLLDTIGMP 115

Query: 142 EGE 144
           E E
Sbjct: 116 ETE 118


>gi|256027986|ref|ZP_05441820.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium sp.
           D11]
          Length = 348

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 19/138 (13%)

Query: 16  RVNVDDKRMLNARSD---------------VNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +V VD K++ N   D               +  L  ++Y WA + Y +   N W+P +V 
Sbjct: 2   KVVVDRKKLFNPEGDDTLNSRKIIKGNSTNLFNLNNVRYQWANQLYRTMMANFWIPEKVD 61

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           +  D   +++   LT  ER      L F    +S+  NNI   I  H++ PE    L  Q
Sbjct: 62  LTQDKNDYEN---LTVPEREAYDGILSFLIFLDSIQTNNIP-NISDHVTAPEVNLLLAIQ 117

Query: 121 AFEEAVHSHTFQYIITSL 138
            F+EA+HS ++QYII S+
Sbjct: 118 TFQEAIHSQSYQYIIESI 135


>gi|296329016|ref|ZP_06871523.1| ribonucleotide-diphosphate reductase beta subunit [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
 gi|296153909|gb|EFG94720.1| ribonucleotide-diphosphate reductase beta subunit [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
          Length = 348

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 11/132 (8%)

Query: 14  EKRVNVDDKRMLNAR-------SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           +K  N +    LNAR       +++  L  ++Y WA + Y +   N W+P +V +  D  
Sbjct: 8   KKLFNPEGDDTLNARKIIKGNSTNLFNLNNVRYQWANQLYRTMMANFWIPEKVDLTQDKN 67

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +++   LT  ER      L F    +S+  NNI   I  H++ PE    L  Q F+EA+
Sbjct: 68  DYEN---LTVPEREAYDGILSFLIFLDSIQTNNIP-NISDHVTAPEVNLLLAIQTFQEAI 123

Query: 127 HSHTFQYIITSL 138
           HS ++QYII S+
Sbjct: 124 HSQSYQYIIESI 135


>gi|19703451|ref|NP_603013.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|19713529|gb|AAL94312.1| Ribonucleoside-diphosphate reductase beta chain [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
          Length = 348

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 11/132 (8%)

Query: 14  EKRVNVDDKRMLNAR-------SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           +K  N +    LNAR       +++  L  ++Y WA + Y +   N W+P +V +  D  
Sbjct: 8   KKLFNPEGDDTLNARKIIKGNSTNLFNLNNVRYQWANQLYRTMMANFWIPEKVDLTQDKN 67

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +++   LT  ER      L F    +S+  NNI   I  H++ PE    L  Q F+EA+
Sbjct: 68  DYEN---LTVPEREAYDGILSFLIFLDSIQTNNIP-NISDHVTAPEVNLLLAIQTFQEAI 123

Query: 127 HSHTFQYIITSL 138
           HS ++QYII S+
Sbjct: 124 HSQSYQYIIESI 135


>gi|227541|prf||1706181A ribonucleotide reductase
          Length = 290

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 6/117 (5%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           + W   EV +  D+  W+S   L  +ER  I   L FFA+S+ +V  N+V    + +   
Sbjct: 1   SFWTAEEVDLSKDIQHWES---LKPEERYFISHVLAFFAASDGIVNENLVERFSQEVQIT 57

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
           E R +   Q   E +HS  +  +I +   D  E   LFN    +P +  KA+WAL++
Sbjct: 58  EARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLFNAIETMPCVKKKADWALRW 114


>gi|34763895|ref|ZP_00144797.1| Ribonucleoside-diphosphate reductase beta chain [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|27886329|gb|EAA23602.1| Ribonucleoside-diphosphate reductase beta chain [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
          Length = 245

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 19/138 (13%)

Query: 16  RVNVDDKRMLNARSD---------------VNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +V VD K++ N   D               +  L  ++Y WA + Y +   N W+P +V 
Sbjct: 2   KVAVDRKKLFNPEGDDTLNARKIIKGNSTNLFNLNNVRYQWANQLYRTMMANFWIPEKVD 61

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           +  D   +++   LT  ER      L F    +S+  NNI   I  H++ PE    L  Q
Sbjct: 62  LTQDKNDYEN---LTVPEREAYDGILSFLIFLDSIQTNNIP-NISDHVTAPEVNLLLAIQ 117

Query: 121 AFEEAVHSHTFQYIITSL 138
            F+EA+HS ++QYII S+
Sbjct: 118 TFQEAIHSQSYQYIIESI 135


>gi|219126374|ref|XP_002183434.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405190|gb|EEC45134.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 296

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 6/126 (4%)

Query: 46  YLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIY 105
           Y  A  + W   E+ +  DL  W   + L+ +ER  +   L FFA+S+ +V  N+     
Sbjct: 2   YKKAEASFWTAEEIDLAGDLQDW---DKLSSNERHFVSHVLAFFAASDGIVNENLAGNFA 58

Query: 106 RHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWA 162
             + + E R +   Q   E +HS T+  +I +   D  E   L +    VP +  KA+WA
Sbjct: 59  TEIQSAEARCFYGFQIAVENIHSETYSLLIDTYVRDAAEKDHLLHAIETVPCVQKKASWA 118

Query: 163 LQYTQT 168
           LQ+   
Sbjct: 119 LQWCDA 124


>gi|326386063|ref|ZP_08207687.1| ribonucleotide-diphosphate reductase subunit beta [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326209288|gb|EGD60081.1| ribonucleotide-diphosphate reductase subunit beta [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 351

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 3/126 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA+E +      HWMP EVP+ +D   W  K  ++D ER ++ +   FF  ++  
Sbjct: 12  PFEYPWAYEFWKRQQQVHWMPEEVPLGEDCRDWAQK--ISDHERNLLTQIFRFFTQADVE 69

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V +       R     E +  L   +  E +H   + +++ ++G+ E E + M+ E   +
Sbjct: 70  VQDCYHEKYGRVFKPTEVKMMLAAFSNMETIHIAAYSHLLDTIGMPESE-YGMFLEYEEM 128

Query: 156 TAKANW 161
            AK ++
Sbjct: 129 KAKHDY 134


>gi|225850104|ref|YP_002730338.1| ribonucleoside-diphosphate reductase, beta subunit [Persephonella
           marina EX-H1]
 gi|225645787|gb|ACO03973.1| ribonucleoside-diphosphate reductase, beta subunit [Persephonella
           marina EX-H1]
          Length = 329

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 3/114 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           +Y    E Y       W P E+ +Q D+  +KS   LT  E+ +   ++G+FASSE LV 
Sbjct: 23  RYPVFKEIYTKQKKAVWFPEELNIQQDVLDYKS---LTPTEKDLFDTSVGYFASSELLVQ 79

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYRE 151
           N +    +  L++P  +     Q F E +HS  F+ I+ +  +D   ++N+  E
Sbjct: 80  NVLGNGFFPVLTDPYAKMSFSTQMFMENIHSDFFEIILNTFEMDRKRIYNITLE 133


>gi|254303614|ref|ZP_04970972.1| ribonucleoside-diphosphate reductase [Fusobacterium nucleatum
           subsp. polymorphum ATCC 10953]
 gi|148323806|gb|EDK89056.1| ribonucleoside-diphosphate reductase [Fusobacterium nucleatum
           subsp. polymorphum ATCC 10953]
          Length = 344

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 11/132 (8%)

Query: 14  EKRVNVDDKRMLNAR-------SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           +K  N +    LNAR       +++  L  ++Y WA + Y +   N W+P +V +  D  
Sbjct: 4   KKLFNPEGDDTLNARRIIKGNSTNLFNLNNVRYQWANQLYRTMMANFWIPEKVDLTQDKN 63

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +++   LT  ER      L F    +S+  NNI   I  H++ PE    L  Q F+EA+
Sbjct: 64  DYEN---LTVPEREAYDGILSFLIFLDSIQTNNIP-NISDHVTAPEVNLLLAIQTFQEAI 119

Query: 127 HSHTFQYIITSL 138
           HS ++QYII S+
Sbjct: 120 HSQSYQYIIESI 131


>gi|294784669|ref|ZP_06749957.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_27]
 gi|294486383|gb|EFG33745.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_27]
          Length = 344

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 11/132 (8%)

Query: 14  EKRVNVDDKRMLNAR-------SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           +K  N +    LNAR       +++  L  ++Y WA + Y +   N W+P +V +  D  
Sbjct: 4   KKLFNPEGDDTLNARRIIKGNSTNLFNLNNVRYQWANQLYRTMMANFWIPEKVDLTQDKN 63

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +++   LT  ER      L F    +S+  NNI   I  H++ PE    L  Q F+EA+
Sbjct: 64  DYEN---LTVPEREAYDGILSFLIFLDSIQTNNIP-NISDHVTAPEVNLLLAIQTFQEAI 119

Query: 127 HSHTFQYIITSL 138
           HS ++QYII S+
Sbjct: 120 HSQSYQYIIESI 131


>gi|27375117|ref|NP_766646.1| ribonucleotide-diphosphate reductase subunit beta [Bradyrhizobium
           japonicum USDA 110]
 gi|27348253|dbj|BAC45271.1| ribonucleoside-diphosphate reductase beta subunit [Bradyrhizobium
           japonicum USDA 110]
          Length = 360

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 14/155 (9%)

Query: 13  GEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
           G+ RV + D        DV+     +Y WA+E +      HWM  EVP+  DL  W S  
Sbjct: 19  GKGRVGLLDS---TGSYDVD-----RYAWAYEFWKRQQQTHWMGEEVPLGADLNDWASGR 70

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE--EAVHSHT 130
            +TD ER ++ +   FF  S+  V +N     Y  +  P   Q ++  AF   E VH   
Sbjct: 71  -VTDSERALLTQIFRFFTQSDIEVGDN-YFKRYIPIFQPLTVQMMM-AAFTNMETVHIDA 127

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQY 165
           +  ++ +LG+ + E F  +R    + AKA++  ++
Sbjct: 128 YALLLKTLGMPKTE-FEAFRGYAQMRAKADYMHEF 161


>gi|237743586|ref|ZP_04574067.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 7_1]
 gi|229432617|gb|EEO42829.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 7_1]
          Length = 344

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 11/132 (8%)

Query: 14  EKRVNVDDKRMLNAR-------SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           +K  N +    LNAR       +++  L  ++Y WA + Y +   N W+P +V +  D  
Sbjct: 4   KKLFNPEGDDTLNARKIIKGNSTNLFNLNNVRYQWANQLYRTMMANFWIPEKVDLTQDKN 63

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +++   LT  ER      L F    +S+  NNI   I  H++ PE    L  Q F+EA+
Sbjct: 64  DYEN---LTVPEREAYDGILSFLIFLDSIQTNNIP-NISDHVTAPEVNLLLAIQTFQEAI 119

Query: 127 HSHTFQYIITSL 138
           HS ++QYII S+
Sbjct: 120 HSQSYQYIIESI 131


>gi|237742881|ref|ZP_04573362.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 4_1_13]
 gi|229430529|gb|EEO40741.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 4_1_13]
          Length = 344

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 11/132 (8%)

Query: 14  EKRVNVDDKRMLNAR-------SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           +K  N +    LNAR       +++  L  ++Y WA + Y +   N W+P +V +  D  
Sbjct: 4   KKLFNPEGDDTLNARKIIKGNSTNLFNLNNVRYQWANQLYRTMMANFWIPEKVDLTQDKN 63

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +++   LT  ER      L F    +S+  NNI   I  H++ PE    L  Q F+EA+
Sbjct: 64  DYEN---LTVPEREAYDGILSFLIFLDSIQTNNIP-NISDHVTAPEVNLLLAIQTFQEAI 119

Query: 127 HSHTFQYIITSL 138
           HS ++QYII S+
Sbjct: 120 HSQSYQYIIESI 131


>gi|260497963|ref|ZP_05816079.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_33]
 gi|260196471|gb|EEW94002.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_33]
          Length = 344

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 4/102 (3%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           ++Y WA + Y +   N W+P +V +  D   +++   LT  ER      L F    +S+ 
Sbjct: 34  VRYQWANQLYRTMMANFWIPEKVDLTQDKNDYEN---LTVPEREAYDGILSFLIFLDSIQ 90

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            NNI   I  H++ PE    L  Q F+EA+HS ++QYII S+
Sbjct: 91  TNNIP-NISEHVTAPEVNLLLAIQTFQEAIHSQSYQYIIESI 131


>gi|188996383|ref|YP_001930634.1| Ribonucleoside-diphosphate reductase [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188931450|gb|ACD66080.1| Ribonucleoside-diphosphate reductase [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 326

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 3/114 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           +Y    E Y       W P E+ +Q D+  +KS   L+  E+ +    +G+FASSE LV 
Sbjct: 20  RYPIFKELYTKQKKAVWFPEELNIQQDVLDYKS---LSPTEKDLFDSAVGYFASSELLVQ 76

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYRE 151
           N +    +  L++P  +     Q F E +HS  F+ I+ S  +D   ++N+  E
Sbjct: 77  NVVGNGFFPVLTDPYAKMSFSTQMFMENIHSDFFEIILNSFDMDRKRIYNITLE 130


>gi|223983469|ref|ZP_03633655.1| hypothetical protein HOLDEFILI_00935 [Holdemania filiformis DSM
           12042]
 gi|223964641|gb|EEF68967.1| hypothetical protein HOLDEFILI_00935 [Holdemania filiformis DSM
           12042]
          Length = 348

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 5/123 (4%)

Query: 17  VNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
            +V  +RM+N  + ++N    LKYGW  + Y  A NN W+P E+ +  DL   K    L 
Sbjct: 17  TDVRRRRMINGNTTNLNDFNTLKYGWVSDWYRQAMNNFWIPEEINLGQDL---KDYPKLE 73

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
              +  + + L F    +S+   N+   I   ++  E    L  QAF+EAVHS ++ Y++
Sbjct: 74  PAVKTALDKTLSFLIFLDSIQTANLP-NIGEVITANEINLCLTIQAFQEAVHSQSYSYML 132

Query: 136 TSL 138
            S 
Sbjct: 133 DSF 135


>gi|15606660|ref|NP_214040.1| ribonucleotide reductase beta chain [Aquifex aeolicus VF5]
 gi|18202109|sp|O67475|RIR2_AQUAE RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit;
           Contains: RecName: Full=Aae nrdB intein; AltName:
           Full=Aae RIR2 intein
 gi|2983879|gb|AAC07431.1| ribonucleotide reductase beta chain [Aquifex aeolicus VF5]
          Length = 696

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/126 (26%), Positives = 71/126 (56%), Gaps = 6/126 (4%)

Query: 29  SDVNQLLPLKYGWAWEKY-LSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLG 87
           +++ +L  +KY WA++ Y L    N W+P E+ M +D   +++   L+D E+   +  L 
Sbjct: 34  TNIFELNEIKYSWAFDLYKLMGFTNFWIPEEIQMLEDRKQYETV--LSDYEKRAYELVLS 91

Query: 88  FFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGEL 145
           F  + +S   + ++    R ++ PE    +  Q F+E+VH++++Q+I+ S+   +   E+
Sbjct: 92  FLIALDSFQVD-MLKEFGRMITAPEVEMAITAQEFQESVHAYSYQFILESVVDPVKADEI 150

Query: 146 FNMYRE 151
           +N +RE
Sbjct: 151 YNYWRE 156


>gi|88607783|ref|YP_505152.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           phagocytophilum HZ]
 gi|88598846|gb|ABD44316.1| ribonucleoside-diphosphate reductase, beta subunit [Anaplasma
           phagocytophilum HZ]
          Length = 323

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 59/111 (53%), Gaps = 6/111 (5%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA++ +L     HW+P EVP+ DD+  WK+   L++ E+ ++ +   FF  ++ +
Sbjct: 12  PFDYPWAYDAWLCQQRIHWLPEEVPLADDVQDWKTM--LSEKEKNLLVQIFRFFTQAD-I 68

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFE--EAVHSHTFQYIITSLGLDEGE 144
             NN  +  Y ++  P     ++  AF   E +H   + Y++ ++G+ E E
Sbjct: 69  EVNNCYMKHYSNIFRP-TEICMMLSAFSNMETIHVAAYSYLLDTIGMPEVE 118


>gi|115691069|ref|XP_001203692.1| PREDICTED: similar to ribonuleotide reductase small subunit,
           partial [Strongylocentrotus purpuratus]
 gi|115735426|ref|XP_798682.2| PREDICTED: similar to ribonuleotide reductase small subunit,
           partial [Strongylocentrotus purpuratus]
          Length = 258

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 6/118 (5%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W   EV + +D   WK    L  +E+  +   L FFA+S+ +V  N+V    + +  PE 
Sbjct: 3   WTTEEVDLGED---WKDWQKLKPEEKHFVTHVLAFFAASDGIVNENLVERFSQEVQIPEA 59

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQT 168
           + +   Q   E +HS  +  +I +   D  E   LFN  + +P +  KA+WAL++  +
Sbjct: 60  KCFYGFQIAMENIHSEMYSLLIDTYVKDPTEKHRLFNAIQTMPFVKKKADWALKWIAS 117


>gi|229816571|ref|ZP_04446870.1| hypothetical protein COLINT_03629 [Collinsella intestinalis DSM
           13280]
 gi|229807906|gb|EEP43709.1| hypothetical protein COLINT_03629 [Collinsella intestinalis DSM
           13280]
          Length = 352

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 5/131 (3%)

Query: 9   PIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           P+      ++V D+RM+   + ++N    +KY W    Y  A NN W+P E+ +  D+  
Sbjct: 13  PLFNPNGDLDVRDRRMIGGNTTNLNDFNNMKYPWVSSWYRQAMNNFWIPEEINLTQDV-- 70

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
            K    L++ ER    + L F    +SL + N+   I  +++  E    L  QAF+E+VH
Sbjct: 71  -KDYPRLSEAERAAYDKILSFLVFLDSLQSANLP-NIAEYITANEVNLCLSIQAFQESVH 128

Query: 128 SHTFQYIITSL 138
           S ++ Y++ ++
Sbjct: 129 SQSYSYMLDTI 139


>gi|88658048|ref|YP_507564.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia
           chaffeensis str. Arkansas]
 gi|88599505|gb|ABD44974.1| ribonucleoside-diphosphate reductase, beta subunit [Ehrlichia
           chaffeensis str. Arkansas]
          Length = 324

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 59/111 (53%), Gaps = 6/111 (5%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA++ +L     HW+P EVP+ DD+  WK+   L++ E+ ++ +   FF  ++ +
Sbjct: 12  PFNYPWAYDAWLCQQRIHWLPEEVPLADDVQDWKTV--LSEKEKNLLVQIFRFFTQAD-I 68

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFE--EAVHSHTFQYIITSLGLDEGE 144
             NN  +  Y ++  P     ++  AF   E +H   + Y++ ++G+ E E
Sbjct: 69  EVNNCYMKHYSNIFKP-TEVCMMLSAFSNMETIHIAAYSYLLDTIGMPEIE 118


>gi|224372455|ref|YP_002606827.1| ribonucleotide-diphosphate reductase subunit beta [Nautilia
           profundicola AmH]
 gi|223589410|gb|ACM93146.1| ribonucleoside-diphosphate reductase, beta subunit [Nautilia
           profundicola AmH]
          Length = 346

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 3/114 (2%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           L Y WA+  +     N W P EV + +D   ++    L   E+ M  + L      +S+ 
Sbjct: 35  LSYPWAYNLWEMMLANTWFPREVDLTEDARQYRQ---LLPAEKRMYDKALSQLIFMDSIQ 91

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
            NN    +   ++ PE    ++RQA+EEA+HS ++  ++ S+ L+  E++ M+R
Sbjct: 92  TNNTPDHVNPWITAPEVNMCIVRQAYEEALHSQSYAVMVDSISLNTDEIYEMWR 145


>gi|289765931|ref|ZP_06525309.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. D11]
 gi|289717486|gb|EFD81498.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. D11]
          Length = 344

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 4/102 (3%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           ++Y WA + Y +   N W+P +V +  D   +++   LT  ER      L F    +S+ 
Sbjct: 34  VRYQWANQLYRTMMANFWIPEKVDLTQDKNDYEN---LTVPEREAYDGILSFLIFLDSIQ 90

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            NNI   I  H++ PE    L  Q F+EA+HS ++QYII S+
Sbjct: 91  TNNIP-NISDHVTAPEVNLLLAIQTFQEAIHSQSYQYIIESI 131


>gi|118197598|ref|YP_874310.1| ribonucleotide reductase small subunit [Ecotropis obliqua NPV]
 gi|113472593|gb|ABI35800.1| ribonucleotide reductase small subunit [Ecotropis obliqua NPV]
          Length = 341

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 9/140 (6%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           +LP++    W    +A +  W   E  +  D   W+ K  L   ER  +K  L FFAS++
Sbjct: 11  ILPIENQNLWRMDKTAMDCMWKVEEDDLSRDFDDWRHK--LCVQERFFLKHILAFFASAD 68

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH-----TFQYIITSLGLDEGELFNM 148
           ++V  N++  +   +   E R +  +Q   E VHS       F+YI  S   +  +L N 
Sbjct: 69  TIVNINLIDYVRAAVPELEARYFYDQQILIENVHSEMYSLLVFEYIKNS--EERNKLLNA 126

Query: 149 YREVPSITAKANWALQYTQT 168
           +  +  I  KA WAL++T++
Sbjct: 127 FDRIDCIKKKAQWALKWTES 146


>gi|167462363|ref|ZP_02327452.1| ribonucleoside-diphosphate reductase beta subunit [Paenibacillus
           larvae subsp. larvae BRL-230010]
          Length = 343

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 71/139 (51%), Gaps = 6/139 (4%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           ++ WA+  Y +   N W+P EVPM  D+  W ++  L D ER   K+ +G  A  +S V 
Sbjct: 33  RFPWAYPMYRNMLRNFWIPDEVPMTADIKQWSTE--LGDHERDTFKKVIGLLAFLDS-VQ 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSI 155
            +    +  +L++      +   +F+E VH+ ++ Y+++SL    ++ E+F  ++    +
Sbjct: 90  TDYSGKVADYLTDSSLSALMSVLSFQEVVHNQSYSYVLSSLVPKSEQDEIFEYWKTDEVL 149

Query: 156 TAKANW-ALQYTQTLSSPS 173
             + ++ A  Y + +  P+
Sbjct: 150 RERNDFLAAGYQRFVDDPT 168


>gi|83592781|ref|YP_426533.1| ribonucleotide-diphosphate reductase subunit beta [Rhodospirillum
           rubrum ATCC 11170]
 gi|83575695|gb|ABC22246.1| Ribonucleoside-diphosphate reductase [Rhodospirillum rubrum ATCC
           11170]
          Length = 358

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 6/126 (4%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           +Y WA+E +      HWM  EVP+ +DL  W S   ++D ER ++ +   FF  S+  V+
Sbjct: 30  RYPWAYEFWKKQQQVHWMGEEVPLGEDLKDWASDR-VSDQERNLLTQIFRFFTQSDVEVS 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFE--EAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           +N  L  Y  +  P   Q ++  AF   E +H   +  ++T+LG+   E F+ +R+  ++
Sbjct: 89  DN-YLKRYMPIFQPLEIQMMM-AAFTNMETIHIDAYALLLTTLGMPRTE-FSAFRDYAAM 145

Query: 156 TAKANW 161
             KA++
Sbjct: 146 RDKADY 151


>gi|254455551|ref|ZP_05068980.1| ribonucleoside-diphosphate reductase, beta subunit [Candidatus
           Pelagibacter sp. HTCC7211]
 gi|207082553|gb|EDZ59979.1| ribonucleoside-diphosphate reductase, beta subunit [Candidatus
           Pelagibacter sp. HTCC7211]
          Length = 335

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 6/120 (5%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y W ++ +L+    HW+P EVP+ DD+  W+    L+  E+ ++ +   FF  ++  
Sbjct: 28  PFRYPWCYDAWLTQQRIHWLPEEVPLGDDVRDWQK--NLSQSEKNLLTQIFRFFTQADVE 85

Query: 96  VANNIVLAIYRHLSNP-ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL--FNMYREV 152
           V NN  L  Y  +  P E    +   A  E VH   + +++ ++G+ E E   F  Y+E+
Sbjct: 86  V-NNCYLRHYTTVFKPTEVLMMMTAFAAMETVHVAAYSHLLDTIGMPESEYSAFMKYKEM 144


>gi|170587050|ref|XP_001898292.1| ribonucleotide reductase 2 [Brugia malayi]
 gi|158594687|gb|EDP33271.1| ribonucleotide reductase 2, putative [Brugia malayi]
          Length = 288

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 3/111 (2%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+K+   W+ Y  A  + W   EV +  D   W++   L D ER  I R L FFA+S+
Sbjct: 58  IFPIKFHDIWDFYKKALASFWTVDEVDLSKDYRDWEN---LNDGERHFISRVLAFFAASD 114

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE 144
            +V  N+V    + +  PE R +   Q   E +HS  +  +I +   D+ +
Sbjct: 115 GIVNENLVNRFSQEVQVPEARFFYGFQIMIENIHSEMYSKMIDTYIRDQKQ 165


>gi|313900116|ref|ZP_07833616.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp.
           HGF2]
 gi|312955168|gb|EFR36836.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp.
           HGF2]
          Length = 347

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 5/121 (4%)

Query: 19  VDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           V  +RM+N  + ++N    +KY W  + Y  A NN W+P E+ +  D+   K    L + 
Sbjct: 18  VGKRRMINGNTTNLNDFNNMKYTWVSDWYRQAMNNFWIPEEINLNQDV---KDYRRLREA 74

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+    + L F    +S+   N+   +  +++  E    L  QAF+EAVHS ++ Y++ S
Sbjct: 75  EKTAYDKTLSFLIFLDSIQTANLP-NVGEYITANEVNLCLTIQAFQEAVHSQSYSYMLDS 133

Query: 138 L 138
           +
Sbjct: 134 I 134


>gi|303234233|ref|ZP_07320879.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia
           magna BVS033A4]
 gi|302494774|gb|EFL54534.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia
           magna BVS033A4]
          Length = 347

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 65/123 (52%), Gaps = 5/123 (4%)

Query: 17  VNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           + +  ++++N  + ++N    +KY W  E Y  A NN W+P E+ +  D+   K    L+
Sbjct: 16  IELSKRKIINGNTTNLNDFNNIKYSWTSEWYRQAMNNFWIPEEINLNQDI---KDYRNLS 72

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           +DE++   + L F    +SL    +   +  +++  E    L  QAF+E++HS ++ YI+
Sbjct: 73  EDEKIAYDKILSFLIYLDSLQTAQLP-NLEAYITANEINLCLSIQAFQESIHSQSYSYIL 131

Query: 136 TSL 138
            ++
Sbjct: 132 DTI 134


>gi|114327552|ref|YP_744709.1| ribonucleotide-diphosphate reductase subunit beta [Granulibacter
           bethesdensis CGDNIH1]
 gi|114315726|gb|ABI61786.1| ribonucleoside-diphosphate reductase beta chain [Granulibacter
           bethesdensis CGDNIH1]
          Length = 339

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 8/121 (6%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA+E +L     HW+P EVP+ DD+  W     L + E+ ++ +   FF  S+  
Sbjct: 32  PFRYPWAYEAWLVQQQVHWLPEEVPLADDVKDW--HRNLNEVEQHLVTQIFRFFTQSDVE 89

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFE--EAVHSHTFQYIITSLGLDEGEL--FNMYRE 151
           V NN  +  Y  +  P     ++  AF   E +H   + +++ ++G+ E E   F  Y+E
Sbjct: 90  V-NNCYMKHYSRVFKP-TEVLMMLSAFSNIETIHIAAYSHLLDTIGMPEVEYSAFLKYKE 147

Query: 152 V 152
           +
Sbjct: 148 M 148


>gi|169824933|ref|YP_001692544.1| ribonucleotide-diphosphate reductase subunit beta [Finegoldia magna
           ATCC 29328]
 gi|167831738|dbj|BAG08654.1| ribonucleoside-diphosphate reductase beta subunit [Finegoldia magna
           ATCC 29328]
          Length = 354

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 65/123 (52%), Gaps = 5/123 (4%)

Query: 17  VNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           + +  ++++N  + ++N    +KY W  E Y  A NN W+P E+ +  D+   K    L+
Sbjct: 23  IELSKRKIINGNTTNLNDFNNIKYSWTSEWYRQAMNNFWIPEEINLNQDI---KDYRNLS 79

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           +DE++   + L F    +SL    +   +  +++  E    L  QAF+E++HS ++ YI+
Sbjct: 80  EDEKIAYDKILSFLIYLDSLQTAQLP-NLEAYITANEINLCLSIQAFQESIHSQSYSYIL 138

Query: 136 TSL 138
            ++
Sbjct: 139 DTI 141


>gi|254293199|ref|YP_003059222.1| ribonucleotide-diphosphate reductase subunit beta [Hirschia baltica
           ATCC 49814]
 gi|254041730|gb|ACT58525.1| Ribonucleoside-diphosphate reductase [Hirschia baltica ATCC 49814]
          Length = 345

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 5/132 (3%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA++ +      HW+P EVP+ +D   W  K  L D ER ++ +   FF  S+  
Sbjct: 21  PFRYPWAYDFWKIQQQVHWVPEEVPLGEDCKDWAGK--LNDKERNLLTQIFRFFTQSDVE 78

Query: 96  VANNIVLAIYRHLSNP-ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPS 154
           V  N  +  Y  L  P E R  L   +  E VH   +  ++ ++G+ + E F+ + E   
Sbjct: 79  VGAN-YMENYMPLFKPVEVRMMLAAFSNMETVHIAAYALLLETIGMPDSE-FSAFMEYEE 136

Query: 155 ITAKANWALQYT 166
           + AK ++  +++
Sbjct: 137 MAAKHDYLGKFS 148


>gi|297587320|ref|ZP_06945965.1| ribonucleotide-diphosphate reductase beta subunit [Finegoldia magna
           ATCC 53516]
 gi|297575301|gb|EFH94020.1| ribonucleotide-diphosphate reductase beta subunit [Finegoldia magna
           ATCC 53516]
          Length = 354

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 65/123 (52%), Gaps = 5/123 (4%)

Query: 17  VNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           + +  ++++N  + ++N    +KY W  E Y  A NN W+P E+ +  D+   K    L+
Sbjct: 23  IELSKRKIINGNTTNLNDFNNIKYSWTSEWYRQAMNNFWIPEEINLNQDI---KDYRNLS 79

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           +DE++   + L F    +SL    +   +  +++  E    L  QAF+E++HS ++ YI+
Sbjct: 80  EDEKIAYDKILSFLIYLDSLQTAQLP-NLEAYITANEINLCLSIQAFQESIHSQSYSYIL 138

Query: 136 TSL 138
            ++
Sbjct: 139 DTI 141


>gi|73666936|ref|YP_302952.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia canis
           str. Jake]
 gi|72394077|gb|AAZ68354.1| Ribonucleoside-diphosphate reductase [Ehrlichia canis str. Jake]
          Length = 324

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 59/111 (53%), Gaps = 6/111 (5%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA++ +L     HW+P EVP+ DD+  WK+   L++ E+ ++ +   FF  ++ +
Sbjct: 12  PFNYPWAYDAWLCQQRIHWLPEEVPLADDVQDWKTV--LSEKEKNLLVQIFRFFTQAD-I 68

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFE--EAVHSHTFQYIITSLGLDEGE 144
             NN  +  Y ++  P     ++  AF   E +H   + Y++ ++G+ E E
Sbjct: 69  EVNNCYMRHYSNIFKP-TEVCMMLAAFSNMETIHIAAYSYLLDTIGMPEIE 118


>gi|91205547|ref|YP_537902.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           bellii RML369-C]
 gi|91069091|gb|ABE04813.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia bellii
           RML369-C]
          Length = 324

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 8/121 (6%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA+E + +    HW+P EVP+ DD+  WK    LT  E+ ++ +   FF  ++ +
Sbjct: 12  PFSYPWAYEAWHTQQKIHWLPEEVPLADDVKDWKY--NLTPGEKHLLTQIFRFFTQAD-I 68

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFE--EAVHSHTFQYIITSLGLDEGEL--FNMYRE 151
             NN  +  Y  +  P     ++  AF   E VH   + +++ ++G+ E E   F  Y+E
Sbjct: 69  EVNNCYMKHYSRVFKP-TEVMMMLSAFSNMETVHIAAYSHLLDTVGMPEVEYSAFLKYKE 127

Query: 152 V 152
           +
Sbjct: 128 M 128


>gi|157827263|ref|YP_001496327.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           bellii OSU 85-389]
 gi|157802567|gb|ABV79290.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           bellii OSU 85-389]
          Length = 324

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 8/121 (6%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA+E + +    HW+P EVP+ DD+  WK    LT  E+ ++ +   FF  ++ +
Sbjct: 12  PFSYPWAYEAWHTQQKIHWLPEEVPLADDVKDWKY--NLTPGEKHLLTQIFRFFTQAD-I 68

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFE--EAVHSHTFQYIITSLGLDEGEL--FNMYRE 151
             NN  +  Y  +  P     ++  AF   E VH   + +++ ++G+ E E   F  Y+E
Sbjct: 69  EVNNCYMKHYSRVFKP-TEVMMMLSAFSNMETVHIAAYSHLLDTVGMPEVEYSAFLKYKE 127

Query: 152 V 152
           +
Sbjct: 128 M 128


>gi|317472120|ref|ZP_07931452.1| ribonucleotide reductase [Anaerostipes sp. 3_2_56FAA]
 gi|316900524|gb|EFV22506.1| ribonucleotide reductase [Anaerostipes sp. 3_2_56FAA]
          Length = 347

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 5/123 (4%)

Query: 17  VNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
            +V  +RM+N  + ++N    +KY W    Y  A NN W+P E+ +  D+  +K    L+
Sbjct: 16  TDVRKRRMINGNTTNLNDFNNMKYPWVSGWYRQAMNNFWIPEEINLGTDIKDYKQ---LS 72

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           + ER    + L F    +S+   N+   I  +++  E    L  QAF+EAVHS ++ Y++
Sbjct: 73  EPERRAYDKILSFLIFLDSIQTANLP-NISEYITANEVNLCLSIQAFQEAVHSQSYSYML 131

Query: 136 TSL 138
            ++
Sbjct: 132 DTI 134


>gi|167748341|ref|ZP_02420468.1| hypothetical protein ANACAC_03085 [Anaerostipes caccae DSM 14662]
 gi|167652333|gb|EDR96462.1| hypothetical protein ANACAC_03085 [Anaerostipes caccae DSM 14662]
          Length = 358

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 5/123 (4%)

Query: 17  VNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
            +V  +RM+N  + ++N    +KY W    Y  A NN W+P E+ +  D+  +K    L+
Sbjct: 27  TDVRKRRMINGNTTNLNDFNNMKYPWVSGWYRQAMNNFWIPEEINLGTDIKDYKQ---LS 83

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           + ER    + L F    +S+   N+   I  +++  E    L  QAF+EAVHS ++ Y++
Sbjct: 84  EPERRAYDKILSFLIFLDSIQTANLP-NISEYITANEVNLCLSIQAFQEAVHSQSYSYML 142

Query: 136 TSL 138
            ++
Sbjct: 143 DTI 145


>gi|31322342|gb|AAP15464.1| ribonucleotide reductase small subunit [Rickettsia rickettsii str.
           'Sheila Smith']
          Length = 336

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 12/127 (9%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK------SKNGLTDDERLMIKRNLGFF 89
           P  Y WA+E + +    HW+P EVP+ DD+  WK       K+ LT  E+ ++ +   FF
Sbjct: 12  PFSYPWAYEAWHTQQKIHWLPEEVPLADDVKDWKYNLTPGEKHLLTPGEKHLLTQIFRFF 71

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE--EAVHSHTFQYIITSLGLDEGEL-- 145
             ++ +  NN  +  Y  +  P     ++  AF   E VH   + +++ ++G+ E E   
Sbjct: 72  TQAD-IEVNNCYMKHYSRVFKP-TEILMMLSAFSNMETVHIAAYSHLLDTVGMPEVEYSA 129

Query: 146 FNMYREV 152
           F  Y+E+
Sbjct: 130 FLKYKEM 136


>gi|15892574|ref|NP_360288.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           conorii str. Malish 7]
 gi|34580440|ref|ZP_00141920.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia
           sibirica 246]
 gi|157828524|ref|YP_001494766.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           rickettsii str. 'Sheila Smith']
 gi|165933242|ref|YP_001650031.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           rickettsii str. Iowa]
 gi|229586746|ref|YP_002845247.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           africae ESF-5]
 gi|238650260|ref|YP_002916112.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           peacockii str. Rustic]
 gi|15619738|gb|AAL03189.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia conorii
           str. Malish 7]
 gi|28261825|gb|EAA25329.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia
           sibirica 246]
 gi|157801005|gb|ABV76258.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           rickettsii str. 'Sheila Smith']
 gi|165908329|gb|ABY72625.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia
           rickettsii str. Iowa]
 gi|228021796|gb|ACP53504.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia africae
           ESF-5]
 gi|238624358|gb|ACR47064.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           peacockii str. Rustic]
          Length = 328

 Score = 55.5 bits (132), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 8/121 (6%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA+E + +    HW+P EVP+ DD+  WK    LT  E+ ++ +   FF  ++ +
Sbjct: 12  PFSYPWAYEAWHTQQKIHWLPEEVPLADDVKDWKY--NLTPGEKHLLTQIFRFFTQAD-I 68

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFE--EAVHSHTFQYIITSLGLDEGEL--FNMYRE 151
             NN  +  Y  +  P     ++  AF   E VH   + +++ ++G+ E E   F  Y+E
Sbjct: 69  EVNNCYMKHYSRVFKP-TEILMMLSAFSNMETVHIAAYSHLLDTVGMPEVEYSAFLKYKE 127

Query: 152 V 152
           +
Sbjct: 128 M 128


>gi|294794440|ref|ZP_06759576.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           3_1_44]
 gi|294454770|gb|EFG23143.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           3_1_44]
          Length = 342

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 56/102 (54%), Gaps = 4/102 (3%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA + Y +  NN W+P E+ + +D+   K    LTD ER    + + F    +S+ 
Sbjct: 32  IKYDWANQMYRTMLNNFWIPEEISLNEDV---KQFPYLTDYERRAFDKIIAFLNFLDSIQ 88

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           + N+   + R+++  E    L  QAF+E +H+ ++ YI+ ++
Sbjct: 89  SENLP-NLSRYITASEVASLLNIQAFQEEIHAQSYSYILDTV 129


>gi|269798663|ref|YP_003312563.1| ribonucleotide reductase [Veillonella parvula DSM 2008]
 gi|294792661|ref|ZP_06757808.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           6_1_27]
 gi|269095292|gb|ACZ25283.1| ribonucleotide reductase [Veillonella parvula DSM 2008]
 gi|294456560|gb|EFG24923.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           6_1_27]
          Length = 342

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 56/102 (54%), Gaps = 4/102 (3%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA + Y +  NN W+P E+ + +D+   K    LTD ER    + + F    +S+ 
Sbjct: 32  IKYDWANQMYRTMLNNFWIPEEISLNEDV---KQFPYLTDYERRAFDKIIAFLNFLDSIQ 88

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           + N+   + R+++  E    L  QAF+E +H+ ++ YI+ ++
Sbjct: 89  SENLP-NLSRYITASEVASLLNIQAFQEEIHAQSYSYILDTV 129


>gi|309775830|ref|ZP_07670824.1| ribonucleoside-diphosphate reductase, beta subunit
           [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916368|gb|EFP62114.1| ribonucleoside-diphosphate reductase, beta subunit
           [Erysipelotrichaceae bacterium 3_1_53]
          Length = 347

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 63/121 (52%), Gaps = 5/121 (4%)

Query: 19  VDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           V  +RM+N  + ++N    +KY W  + Y  A NN W+P E+ +  D+  ++    L + 
Sbjct: 18  VGKRRMINGNTTNLNDFNNMKYTWVSDWYRQAMNNFWIPEEINLNQDVKDYRR---LHEA 74

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+    + L F    +S+   N+   +  +++  E    L  QAF+EAVHS ++ Y++ S
Sbjct: 75  EKTAYDKTLSFLIFLDSIQTANLP-NVGEYVTANEVNLCLTIQAFQEAVHSQSYSYMLDS 133

Query: 138 L 138
           +
Sbjct: 134 I 134


>gi|157964544|ref|YP_001499368.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           massiliae MTU5]
 gi|157844320|gb|ABV84821.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia
           massiliae MTU5]
          Length = 336

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 8/121 (6%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA+E + +    HW+P EVP+ DD+  WK    LT  E+ ++ +   FF  ++ +
Sbjct: 13  PFSYPWAYEAWHTQQKIHWLPEEVPLADDVKDWKY--NLTPGEKHLLTQIFRFFTQAD-I 69

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFE--EAVHSHTFQYIITSLGLDEGEL--FNMYRE 151
             NN  +  Y  +  P     ++  AF   E VH   + +++ ++G+ E E   F  Y+E
Sbjct: 70  EVNNCYMKHYSRVFKP-TEILMMLSAFSNMETVHIAAYSHLLDTVGMPEVEYSAFLKYKE 128

Query: 152 V 152
           +
Sbjct: 129 M 129


>gi|187778605|ref|ZP_02995078.1| hypothetical protein CLOSPO_02200 [Clostridium sporogenes ATCC
           15579]
 gi|187772230|gb|EDU36032.1| hypothetical protein CLOSPO_02200 [Clostridium sporogenes ATCC
           15579]
          Length = 342

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 63/117 (53%), Gaps = 6/117 (5%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA + Y +  NN W+P E+ + +D+   K    LTD ER    + + F    +S+ 
Sbjct: 32  IKYSWASDFYRTMLNNFWIPEEISLNEDV---KQFPYLTDGERNAFDKIISFLNFLDSVQ 88

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELFNMYRE 151
           + N+   I R+++  E    L  Q F+E +H+ ++ YI+ ++   +   ++++ +RE
Sbjct: 89  SENLP-NISRYITAAEVSSLLNIQTFQEEIHAQSYSYILDTVTNPITRDKIYDQWRE 144


>gi|325859841|ref|ZP_08172971.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           denticola CRIS 18C-A]
 gi|325482767|gb|EGC85770.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           denticola CRIS 18C-A]
          Length = 348

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 9/136 (6%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           NT  +P    + R+    KRM+   + ++N    +KY W  + Y  A NN W+P E+ + 
Sbjct: 8   NTLFNPSGDTDLRL----KRMIGGNTTNLNDFNNMKYSWVSDWYRQAMNNFWIPEEINLS 63

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D   +K    L   ER    + L F    +SL +NN+   +  +++  E    L  QAF
Sbjct: 64  QD---FKDYPRLDKAERTAYDKILSFLVFLDSLQSNNLP-TVSEYITANEVNLCLHIQAF 119

Query: 123 EEAVHSHTFQYIITSL 138
           +E +HS ++ Y++ ++
Sbjct: 120 QECIHSQSYSYMLDTI 135


>gi|320536436|ref|ZP_08036471.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           phagedenis F0421]
 gi|320146705|gb|EFW38286.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           phagedenis F0421]
          Length = 363

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 5/123 (4%)

Query: 17  VNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           V +  +RM+   + ++N    LKY W  E Y  A NN W+P E+ M  D+  ++    L+
Sbjct: 32  VELHKRRMIGGNTTNLNDFNNLKYPWVSEWYRQAMNNFWIPEEINMNTDVQDYRK---LS 88

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
             E+    + L F    +S+   N+   + ++++  E    L  QAF+EAVHS ++ Y++
Sbjct: 89  KAEKTAYDKILSFLIFLDSIQTANLP-NVGQYITANEVNLCLTIQAFQEAVHSQSYSYML 147

Query: 136 TSL 138
            ++
Sbjct: 148 DTI 150


>gi|168179222|ref|ZP_02613886.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum NCTC 2916]
 gi|182669722|gb|EDT81698.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum NCTC 2916]
          Length = 342

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 63/117 (53%), Gaps = 6/117 (5%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA + Y +  NN W+P E+ + +D+   K    LTD ER    + + F    +S+ 
Sbjct: 32  IKYSWASDFYRTMLNNFWIPEEISLNEDI---KQFPYLTDGERNAFDKIISFLNFLDSVQ 88

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELFNMYRE 151
           + N+   I R+++  E    L  Q F+E +H+ ++ YI+ ++   +   ++++ +RE
Sbjct: 89  SENLP-NISRYITAAEVSSLLNIQTFQEEIHAQSYSYILDTVTNPITRDKIYDQWRE 144


>gi|239947951|ref|ZP_04699704.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsia
           endosymbiont of Ixodes scapularis]
 gi|239922227|gb|EER22251.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsia
           endosymbiont of Ixodes scapularis]
          Length = 327

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 8/121 (6%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA+E + +    HW+P EVP+ DD+  WK    LT  E+ ++ +   FF  ++ +
Sbjct: 12  PFSYPWAYEAWHTQQKIHWLPEEVPLADDVKDWKY--NLTPGEKHLLTQIFRFFTQAD-I 68

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFE--EAVHSHTFQYIITSLGLDEGEL--FNMYRE 151
             NN  +  Y  +  P     ++  AF   E VH   + +++ ++G+ E E   F  Y+E
Sbjct: 69  EVNNCYMKHYSRVFKP-TEILMMLSAFSNMETVHIAAYSHLLDTVGMPEVEYSAFLKYKE 127

Query: 152 V 152
           +
Sbjct: 128 M 128


>gi|225386408|ref|ZP_03756172.1| hypothetical protein CLOSTASPAR_00155 [Clostridium asparagiforme
           DSM 15981]
 gi|225047489|gb|EEG57735.1| hypothetical protein CLOSTASPAR_00155 [Clostridium asparagiforme
           DSM 15981]
          Length = 347

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 64/127 (50%), Gaps = 7/127 (5%)

Query: 13  GEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSK 71
           G+  VN+  +RM+   + ++N    +KY W    Y  A NN W+P E+ M  D+   K  
Sbjct: 14  GDTEVNL--RRMIGGNTTNLNDFNNMKYAWVSGWYRQAMNNFWIPEEINMSSDI---KDY 68

Query: 72  NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
             L + ER    + L F    +S+   N+   I ++++  E    L  Q F+EAVHS ++
Sbjct: 69  PELPEAERTAYDKILSFLIFLDSIQTANLP-NIGQYITANEVNLCLTIQGFQEAVHSQSY 127

Query: 132 QYIITSL 138
            Y++ ++
Sbjct: 128 SYMLDTI 134


>gi|303228685|ref|ZP_07315510.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           atypica ACS-134-V-Col7a]
 gi|303230495|ref|ZP_07317254.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           atypica ACS-049-V-Sch6]
 gi|302514861|gb|EFL56844.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           atypica ACS-049-V-Sch6]
 gi|302516665|gb|EFL58582.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           atypica ACS-134-V-Col7a]
          Length = 342

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 56/102 (54%), Gaps = 4/102 (3%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA + Y +  NN W+P E+ + +D+   K    LTD ER    + + F    +S+ 
Sbjct: 32  IKYDWANQMYRTMLNNFWIPEEISLNEDV---KQFPYLTDYERRAFDKIIAFLNFLDSIQ 88

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           + N+   + R+++  E    L  QAF+E +H+ ++ YI+ ++
Sbjct: 89  SENLP-NLSRYITASEVASLLNIQAFQEEIHAQSYSYILDTV 129


>gi|238018468|ref|ZP_04598894.1| hypothetical protein VEIDISOL_00295 [Veillonella dispar ATCC 17748]
 gi|237864939|gb|EEP66229.1| hypothetical protein VEIDISOL_00295 [Veillonella dispar ATCC 17748]
          Length = 342

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 56/102 (54%), Gaps = 4/102 (3%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA + Y +  NN W+P E+ + +D+   K    LTD ER    + + F    +S+ 
Sbjct: 32  IKYDWANQMYRTMLNNFWIPEEISLNEDV---KQFPYLTDYERRAFDKIIAFLNFLDSIQ 88

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           + N+   + R+++  E    L  QAF+E +H+ ++ YI+ ++
Sbjct: 89  SENLP-NLSRYITASEVASLLNIQAFQEEIHAQSYSYILDTV 129


>gi|282849773|ref|ZP_06259157.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           parvula ATCC 17745]
 gi|282580710|gb|EFB86109.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           parvula ATCC 17745]
          Length = 342

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 56/102 (54%), Gaps = 4/102 (3%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA + Y +  NN W+P E+ + +D+   K    LTD ER    + + F    +S+ 
Sbjct: 32  IKYDWANQMYRTMLNNFWIPEEISLNEDV---KQFPYLTDYERRAFDKIIAFLNFLDSIQ 88

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           + N+   + R+++  E    L  QAF+E +H+ ++ YI+ ++
Sbjct: 89  SENLP-NLSRYITASEVASLLNIQAFQEEIHAQSYSYILDTV 129


>gi|226950223|ref|YP_002805314.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A2 str. Kyoto]
 gi|226843961|gb|ACO86627.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A2 str. Kyoto]
          Length = 342

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 63/117 (53%), Gaps = 6/117 (5%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA + Y +  NN W+P E+ + +D+   K    LTD ER    + + F    +S+ 
Sbjct: 32  IKYSWASDFYRTMLNNFWIPEEISLNEDI---KQFPYLTDGERNAFDKIISFLNFLDSVQ 88

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELFNMYRE 151
           + N+   I R+++  E    L  Q F+E +H+ ++ YI+ ++   +   ++++ +RE
Sbjct: 89  SENLP-NISRYITAAEVSSLLNIQTFQEEIHAQSYSYILDTVTNPITRDKIYDQWRE 144


>gi|149185037|ref|ZP_01863354.1| ribonucleotide reductase beta subunit [Erythrobacter sp. SD-21]
 gi|148831148|gb|EDL49582.1| ribonucleotide reductase beta subunit [Erythrobacter sp. SD-21]
          Length = 352

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA+E +      HWMP EVP+ +D   W  K  LT+ ER ++ +   FF  ++  
Sbjct: 12  PFEYPWAYEFWKRQQQIHWMPEEVPLGEDCRDWAQK--LTEHERNLLTQIFRFFTQADVE 69

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V +       R     E +  L   +  E VH   + +++ ++G+ E E ++ + +   +
Sbjct: 70  VQDCYHDKYGRVFKPTEVKMMLTAFSNMETVHIAAYSHLLDTIGMPESE-YSAFLDYEEM 128

Query: 156 TAKANWALQY 165
             K N+  Q+
Sbjct: 129 ADKHNYMQQF 138


>gi|153940168|ref|YP_001392091.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum F str. Langeland]
 gi|170756361|ref|YP_001782419.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum B1 str. Okra]
 gi|152936064|gb|ABS41562.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum F str. Langeland]
 gi|169121573|gb|ACA45409.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum B1 str. Okra]
 gi|322807123|emb|CBZ04697.1| ribonucleotide reductase of class Ia (aerobic),beta subunit
           [Clostridium botulinum H04402 065]
          Length = 342

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 63/117 (53%), Gaps = 6/117 (5%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA + Y +  NN W+P E+ + +D+   K    LTD ER    + + F    +S+ 
Sbjct: 32  IKYSWASDFYRTMLNNFWIPEEISLNEDI---KQFPYLTDGERNAFDKIISFLNFLDSVQ 88

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELFNMYRE 151
           + N+   I R+++  E    L  Q F+E +H+ ++ YI+ ++   +   ++++ +RE
Sbjct: 89  SENLP-NISRYITAAEVSSLLNIQTFQEEIHAQSYSYILDTVTNPITRDKIYDQWRE 144


>gi|257456224|ref|ZP_05621421.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           vincentii ATCC 35580]
 gi|257446310|gb|EEV21356.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           vincentii ATCC 35580]
          Length = 351

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 65/123 (52%), Gaps = 5/123 (4%)

Query: 17  VNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           + V  ++M+   + ++N    +KY WA E Y  A NN W+P E+ M  D+  ++    L+
Sbjct: 20  IEVHLRKMIGGNTTNLNDFNNMKYAWASEWYRQAMNNFWIPEEINMNADVQDYRK---LS 76

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
             E+    + L F    +S+   N+   + ++++  E    L  QAF+EAVHS ++ Y++
Sbjct: 77  PAEKTAYDKILSFLIFLDSIQTANLP-NVGQYITANEVNLCLTIQAFQEAVHSQSYSYML 135

Query: 136 TSL 138
            ++
Sbjct: 136 DTI 138


>gi|148380773|ref|YP_001255314.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A str. ATCC 3502]
 gi|153932443|ref|YP_001385057.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A str. ATCC 19397]
 gi|153934989|ref|YP_001388527.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A str. Hall]
 gi|148290257|emb|CAL84376.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           botulinum A str. ATCC 3502]
 gi|152928487|gb|ABS33987.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A str. ATCC 19397]
 gi|152930903|gb|ABS36402.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A str. Hall]
          Length = 342

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 63/117 (53%), Gaps = 6/117 (5%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA + Y +  NN W+P E+ + +D+   K    LTD ER    + + F    +S+ 
Sbjct: 32  IKYSWASDFYRTMLNNFWIPEEISLNEDI---KQFPYLTDGERNAFDKIISFLNFLDSVQ 88

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELFNMYRE 151
           + N+   I R+++  E    L  Q F+E +H+ ++ YI+ ++   +   ++++ +RE
Sbjct: 89  SENLP-NISRYITAAEVSSLLNIQTFQEEIHAQSYSYILDTVTNPITRDKIYDQWRE 144


>gi|170761039|ref|YP_001788131.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A3 str. Loch Maree]
 gi|169408028|gb|ACA56439.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A3 str. Loch Maree]
          Length = 342

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 63/117 (53%), Gaps = 6/117 (5%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA + Y +  NN W+P E+ + +D+   K    LTD ER    + + F    +S+ 
Sbjct: 32  IKYSWASDFYRTMLNNFWIPEEISLNEDI---KQFPYLTDGERNAFDKIISFLNFLDSVQ 88

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELFNMYRE 151
           + N+   I R+++  E    L  Q F+E +H+ ++ YI+ ++   +   ++++ +RE
Sbjct: 89  SENLP-NISRYITAAEVSSLLNIQTFQEEIHAQSYSYILDTVTNPITRDKIYDQWRE 144


>gi|239628850|ref|ZP_04671881.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239518996|gb|EEQ58862.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 347

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 5/118 (4%)

Query: 22  KRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           +RM+   + ++N    +KY WA   Y  A NN W+P E+ +  D+   K    L+  ER 
Sbjct: 21  RRMIGGNTTNLNDFNNMKYTWASAWYRQAMNNFWIPEEINLSTDV---KDYRNLSAAERE 77

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
              + L F    +S+   N+   I ++++  E    L  Q F+EAVHS ++ Y++ S+
Sbjct: 78  AFDKILSFLVFLDSIQTANLP-CIGQYITANEVNLCLTIQGFQEAVHSQSYSYMLDSI 134


>gi|168184457|ref|ZP_02619121.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum Bf]
 gi|237796249|ref|YP_002863801.1| ribonucleoside-diphosphate reductase subunit beta [Clostridium
           botulinum Ba4 str. 657]
 gi|182672468|gb|EDT84429.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum Bf]
 gi|229263158|gb|ACQ54191.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum Ba4 str. 657]
          Length = 342

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 63/117 (53%), Gaps = 6/117 (5%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA + Y +  NN W+P E+ + +D+   K    LTD ER    + + F    +S+ 
Sbjct: 32  IKYSWASDFYRTMLNNFWIPEEISLNEDI---KQFPYLTDGERNAFDKIISFLNFLDSVQ 88

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELFNMYRE 151
           + N+   I R+++  E    L  Q F+E +H+ ++ YI+ ++   +   ++++ +RE
Sbjct: 89  SENLP-NISRYITAAEVSSLLNIQTFQEEIHAQSYSYILDTVTNPITRDKIYDQWRE 144


>gi|91763118|ref|ZP_01265082.1| ribonucleotide-diphosphate reductase beta subunit [Candidatus
           Pelagibacter ubique HTCC1002]
 gi|91717531|gb|EAS84182.1| ribonucleotide-diphosphate reductase beta subunit [Candidatus
           Pelagibacter ubique HTCC1002]
          Length = 342

 Score = 55.1 bits (131), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 6/120 (5%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y W ++ +L+    HW+P EVP+ DD+  W  +  LT  E+ ++ +   FF  ++  
Sbjct: 35  PFRYPWCYDAWLTQQRIHWLPEEVPLGDDVRDW--QKNLTQSEKNLLTQIFRFFTQADVE 92

Query: 96  VANNIVLAIYRHLSNP-ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL--FNMYREV 152
           V  N  L  Y  +  P E    +   A  E VH   + +++ ++G+ E E   F  Y+E+
Sbjct: 93  V-QNCYLRHYTTVFKPTEVLMMMTAFASMETVHIAAYSHLLDTIGMPESEYSAFMKYKEM 151


>gi|103487260|ref|YP_616821.1| ribonucleotide-diphosphate reductase subunit beta [Sphingopyxis
           alaskensis RB2256]
 gi|98977337|gb|ABF53488.1| Ribonucleoside-diphosphate reductase [Sphingopyxis alaskensis
           RB2256]
          Length = 354

 Score = 55.1 bits (131), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 63/130 (48%), Gaps = 3/130 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA++ +      HW+P EVP+ +D   W  K  ++D ER ++ +   FF  ++  
Sbjct: 12  PFEYPWAFDFWKRQQQIHWVPEEVPLGEDCRDWAQK--ISDHERNLLTQIFRFFTQADIE 69

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V +       R     E +  L   +  E VH   + +++ ++G+ E E + M+ E   +
Sbjct: 70  VQDCYHEKYGRVFKPTEIKMMLTAFSNMETVHIAAYSHLLDTIGMPESE-YGMFLEYDEM 128

Query: 156 TAKANWALQY 165
            AK ++  Q+
Sbjct: 129 RAKHDYMQQF 138


>gi|71083845|ref|YP_266565.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Pelagibacter ubique HTCC1062]
 gi|71062958|gb|AAZ21961.1| ribonucleoside-diphosphate reductase beta chain [Candidatus
           Pelagibacter ubique HTCC1062]
          Length = 337

 Score = 55.1 bits (131), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 6/120 (5%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y W ++ +L+    HW+P EVP+ DD+  W  +  LT  E+ ++ +   FF  ++  
Sbjct: 30  PFRYPWCYDAWLTQQRIHWLPEEVPLGDDVRDW--QKNLTQSEKNLLTQIFRFFTQADVE 87

Query: 96  VANNIVLAIYRHLSNP-ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL--FNMYREV 152
           V  N  L  Y  +  P E    +   A  E VH   + +++ ++G+ E E   F  Y+E+
Sbjct: 88  V-QNCYLRHYTTVFKPTEVLMMMTAFASMETVHIAAYSHLLDTIGMPESEYSAFMKYKEM 146


>gi|227871657|ref|ZP_03990072.1| ribonucleoside-diphosphate reductase [Oribacterium sinus F0268]
 gi|227842499|gb|EEJ52714.1| ribonucleoside-diphosphate reductase [Oribacterium sinus F0268]
          Length = 347

 Score = 55.1 bits (131), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 69/131 (52%), Gaps = 5/131 (3%)

Query: 9   PIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           P+   E  ++V ++RM+N  + ++N    ++Y W  + Y  A NN W+P E+ +  D + 
Sbjct: 8   PLFNPEGDIDVRNRRMINFNTTNINDFNNMRYEWVSDWYRQAMNNFWVPEEINLNQDKSD 67

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           +     L++ ER    + L F    +SL + N+   I ++++  E    L  Q F+E +H
Sbjct: 68  YPK---LSEAERRAYDKILSFLVYLDSLQSANLP-NISQYVTANEVNLCLSIQTFQECIH 123

Query: 128 SHTFQYIITSL 138
           S ++ Y++ ++
Sbjct: 124 SQSYSYMLDTI 134


>gi|289548460|ref|YP_003473448.1| ribonucleoside-diphosphate reductase [Thermocrinis albus DSM 14484]
 gi|289182077|gb|ADC89321.1| Ribonucleoside-diphosphate reductase [Thermocrinis albus DSM 14484]
          Length = 342

 Score = 55.1 bits (131), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 69/126 (54%), Gaps = 6/126 (4%)

Query: 29  SDVNQLLPLKYGWAWEKYLS-ACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLG 87
           +++ +L  +KY WA++ Y +    N W+P E+ M +D   ++    L+  E+   +  L 
Sbjct: 26  TNIMELNNVKYQWAFDLYKTMGFTNFWIPEEISMMEDRKQYE--RVLSAHEKRAYEMVLS 83

Query: 88  FFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGEL 145
           F  + +S   N ++    R L+ PE    +  Q F+EA+HS+++Q+I+ S+   +   E+
Sbjct: 84  FLIALDSYQVN-MLKEFARFLTAPELTMAITAQEFQEALHSYSYQFILESVVDPVKADEI 142

Query: 146 FNMYRE 151
           +N +RE
Sbjct: 143 YNYWRE 148


>gi|261419130|ref|YP_003252812.1| ribonucleoside-diphosphate reductase [Geobacillus sp. Y412MC61]
 gi|319765947|ref|YP_004131448.1| ribonucleotide reductase [Geobacillus sp. Y412MC52]
 gi|261375587|gb|ACX78330.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. Y412MC61]
 gi|317110813|gb|ADU93305.1| ribonucleotide reductase [Geobacillus sp. Y412MC52]
          Length = 346

 Score = 54.7 bits (130), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 65/128 (50%), Gaps = 6/128 (4%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           + Y WA+ KY     N W P E+ M  D+   K    LTD E+    + +G  A  +S +
Sbjct: 36  IAYPWAYAKYKRMLANFWTPFEINMSQDV---KQFPQLTDREQDAFLKIIGLLALLDS-I 91

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPS 154
             +    +  ++++P     ++  A +E +H+H++ Y+++SL     + E+F+ +R  P+
Sbjct: 92  QTDYAGRVADYITDPSINALMIMLAQQEVIHNHSYSYVLSSLVPKAKQDEVFDFWRNEPT 151

Query: 155 ITAKANWA 162
           +  + ++ 
Sbjct: 152 LRKRNDFV 159


>gi|297530897|ref|YP_003672172.1| ribonucleotide reductase [Geobacillus sp. C56-T3]
 gi|297254149|gb|ADI27595.1| ribonucleotide reductase [Geobacillus sp. C56-T3]
          Length = 346

 Score = 54.7 bits (130), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 65/128 (50%), Gaps = 6/128 (4%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           + Y WA+ KY     N W P E+ M  D+   K    LTD E+    + +G  A  +S +
Sbjct: 36  IAYPWAYAKYKRMLANFWTPFEINMSQDV---KQFPQLTDREQDAFLKIIGLLALLDS-I 91

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPS 154
             +    +  ++++P     ++  A +E +H+H++ Y+++SL     + E+F+ +R  P+
Sbjct: 92  QTDYAGRVADYITDPSINALMIMLAQQEVIHNHSYSYVLSSLVPKAKQDEVFDFWRNEPT 151

Query: 155 ITAKANWA 162
           +  + ++ 
Sbjct: 152 LRKRNDFV 159


>gi|56419447|ref|YP_146765.1| ribonucleoside-diphosphate reductase subunit beta [Geobacillus
           kaustophilus HTA426]
 gi|56379289|dbj|BAD75197.1| ribonucleoside-diphosphate reductase beta subunit [Geobacillus
           kaustophilus HTA426]
          Length = 346

 Score = 54.7 bits (130), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/128 (24%), Positives = 65/128 (50%), Gaps = 6/128 (4%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           + Y WA+ KY     N W P E+ M  D+   K    LTD E+    + +G  A  +S +
Sbjct: 36  IAYPWAYAKYKRMLANFWTPFEINMAQDV---KQFPQLTDREQDAFLKIIGLLALLDS-I 91

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPS 154
             +    +  ++++P     ++  A +E +H+H++ Y+++SL     + E+F+ +R  P+
Sbjct: 92  QTDYAGRVADYITDPSINALMIMLAQQEVIHNHSYSYVLSSLVPKAKQDEVFDFWRNEPT 151

Query: 155 ITAKANWA 162
           +  + ++ 
Sbjct: 152 LRKRNDFV 159


>gi|215401283|ref|YP_002332587.1| ribonucleotide reductase small subunit [Helicoverpa armigera
           multiple nucleopolyhedrovirus]
 gi|198448783|gb|ACH88573.1| ribonucleotide reductase small subunit [Helicoverpa armigera
           multiple nucleopolyhedrovirus]
          Length = 313

 Score = 54.7 bits (130), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 70/137 (51%), Gaps = 5/137 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+ +   +E Y  A    W   EV +  D   ++ K  L +D+R  I   LGFF++++
Sbjct: 8   LYPIVHEDLYEAYKRAEACFWRMEEVDLSKDYDDFQLK--LNNDQRHFIMHVLGFFSAAD 65

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
           S+V  N++  + + +   E   +   QA  E VH+  +  +I +L  D+ +   + N + 
Sbjct: 66  SIVNINVLDYMLQTVPELEAVYFYTFQAAMENVHTQMYGTLIITLIPDKKQQDLILNAFD 125

Query: 151 EVPSITAKANWALQYTQ 167
            +P +  K +WAL++T+
Sbjct: 126 NIPCVRKKDDWALKWTK 142


>gi|119360103|gb|ABL66780.1| At5g40942 [Arabidopsis thaliana]
          Length = 231

 Score = 54.7 bits (130), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 2/109 (1%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L    D   + P++Y   WE Y  A  + W   EV +  D   W+  N LT+DER 
Sbjct: 6   EEPILTPTPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWE--NSLTNDERH 63

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
            IK  L FFA+S+ +V  N+       +   E R +   Q   E +HS 
Sbjct: 64  FIKHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSE 112


>gi|306819883|ref|ZP_07453537.1| ribonucleotide-diphosphate reductase beta subunit [Eubacterium
           yurii subsp. margaretiae ATCC 43715]
 gi|304552130|gb|EFM40067.1| ribonucleotide-diphosphate reductase beta subunit [Eubacterium
           yurii subsp. margaretiae ATCC 43715]
          Length = 347

 Score = 54.7 bits (130), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 65/123 (52%), Gaps = 5/123 (4%)

Query: 17  VNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           + ++ ++M+N  + ++N    +KY W  + Y  A NN W+P E+ +  D+   K    L+
Sbjct: 16  IELNKRKMINGNTTNLNDFNNMKYTWVSDWYRQAMNNFWIPEEINLTQDI---KDYRKLS 72

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
            +E+    + L F    +S+   N+   I  +++  E    L  QA++EA+HS ++ YI+
Sbjct: 73  KEEKNAYDKILSFLVFLDSIQTANLP-NIGEYITANEVNLCLTIQAYQEAIHSQSYGYIL 131

Query: 136 TSL 138
            ++
Sbjct: 132 DTI 134


>gi|319790519|ref|YP_004152152.1| ribonucleotide reductase [Thermovibrio ammonificans HB-1]
 gi|317115021|gb|ADU97511.1| ribonucleotide reductase [Thermovibrio ammonificans HB-1]
          Length = 352

 Score = 54.7 bits (130), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 7/159 (4%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA + Y     N W+P  V +  D+  +K    LTDDER      L F    +S+ 
Sbjct: 42  IKYPWATKLYRVMMANFWIPETVDLTQDVQDYKE---LTDDERQAYDEILSFLVFLDSIQ 98

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG--ELFNMYREVPS 154
             NI   I  ++  PE    L   A++EA+HS ++ Y I S+   E   E++  +++ P 
Sbjct: 99  TTNIP-NIAAYVKAPEITIDLSIHAYQEAIHSQSYGYTIESVVPAEKREEVYYWWKKDPI 157

Query: 155 ITAKANW-ALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           +  +  + A  Y + L  P+   + +      L   L F
Sbjct: 158 LFERNKYIADIYQKFLEEPTLENYGEVLIGNYLLEGLYF 196


>gi|258648774|ref|ZP_05736243.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           tannerae ATCC 51259]
 gi|260851104|gb|EEX70973.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           tannerae ATCC 51259]
          Length = 350

 Score = 54.7 bits (130), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 5/118 (4%)

Query: 22  KRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           KRM+N  + ++N    +KY W  + Y  A NN W+P E+ +  DL   K  + L   ER 
Sbjct: 24  KRMINGNTTNLNDFNNMKYKWVSDWYRQAMNNFWIPEEINLGQDL---KDYSKLLPAERT 80

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
              + L F    +S+   N+   +  +++  E    L  Q F+EAVHS ++ Y++ ++
Sbjct: 81  AYDKILSFLIFLDSIQTANLP-NVSEYITASEVNLCLNIQTFQEAVHSQSYSYMLDTI 137


>gi|160947324|ref|ZP_02094491.1| hypothetical protein PEPMIC_01258 [Parvimonas micra ATCC 33270]
 gi|158446458|gb|EDP23453.1| hypothetical protein PEPMIC_01258 [Parvimonas micra ATCC 33270]
          Length = 349

 Score = 54.7 bits (130), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 65/123 (52%), Gaps = 5/123 (4%)

Query: 17  VNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           + +  ++M+N  + ++N    +KY W  E Y +A NN W+P E+ +  DL  +K    L 
Sbjct: 15  IELSKRKMINGNTTNLNDFNNVKYTWTTEWYRNAMNNFWIPEEINLFQDLKDYKI---LD 71

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           + E+    + L F    +S+   N+   I  +++  E    L  QA++EA+HS ++ Y++
Sbjct: 72  EYEKTAFDKVLSFLIFLDSIQTANLPY-IGEYITANEINLCLTIQAYQEAIHSQSYGYML 130

Query: 136 TSL 138
            S+
Sbjct: 131 DSI 133


>gi|150005609|ref|YP_001300353.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           vulgatus ATCC 8482]
 gi|254884474|ref|ZP_05257184.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
           4_3_47FAA]
 gi|294778581|ref|ZP_06744003.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides
           vulgatus PC510]
 gi|319640834|ref|ZP_07995547.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp.
           3_1_40A]
 gi|149934033|gb|ABR40731.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides
           vulgatus ATCC 8482]
 gi|254837267|gb|EET17576.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
           4_3_47FAA]
 gi|294447530|gb|EFG16108.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides
           vulgatus PC510]
 gi|317387646|gb|EFV68512.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp.
           3_1_40A]
          Length = 349

 Score = 54.3 bits (129), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 5/126 (3%)

Query: 14  EKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
           E   ++  +RM+   + ++N    ++Y W  + Y  A NN W+P E+ +  D    K   
Sbjct: 15  EGDTDLRHRRMIGGNTTNLNDFNNMRYKWVSDWYRQAMNNFWIPEEINLTQDT---KDYP 71

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
            L   ER    + L F    +SL +NN+   I  +++  E    L  QAF+E VHS ++ 
Sbjct: 72  HLDQAERTAYDKILSFLVFLDSLQSNNLP-TISEYITANEVNLCLHIQAFQECVHSQSYS 130

Query: 133 YIITSL 138
           Y++ S+
Sbjct: 131 YMLDSI 136


>gi|94495782|ref|ZP_01302361.1| ribonucleotide reductase beta subunit [Sphingomonas sp. SKA58]
 gi|94424474|gb|EAT09496.1| ribonucleotide reductase beta subunit [Sphingomonas sp. SKA58]
          Length = 350

 Score = 54.3 bits (129), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 4/119 (3%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA+E +      HW+P EVP+ +D   W  K  L+D ER ++ +   FF  ++  
Sbjct: 12  PFEYPWAYEYWKRQQQLHWLPEEVPLGEDCRDWAQK--LSDHERNLLTQIFRFFTQADVE 69

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL--FNMYREV 152
           V +       R     E +  L   +  E VH   + +++ ++G+ E E   F  Y+E+
Sbjct: 70  VQDCYHEKYGRVFKPTEVKMMLTAFSNMETVHIAAYSHLLDTIGMPESEYSAFMQYKEM 128


>gi|327312835|ref|YP_004328272.1| ribonucleoside-diphosphate reductase subunit beta [Prevotella
           denticola F0289]
 gi|326946303|gb|AEA22188.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           denticola F0289]
          Length = 348

 Score = 54.3 bits (129), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 67/136 (49%), Gaps = 9/136 (6%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           NT  +P    + R+    +RM+   + ++N    +KY W  + Y  A NN W+P E+ + 
Sbjct: 8   NTLFNPSGDTDLRL----RRMIGGNTTNLNDFNNMKYSWVSDWYRQAMNNFWIPEEINLS 63

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D   +K    L   ER    + L F    +SL +NN+   +  +++  E    L  QAF
Sbjct: 64  QD---FKDYPRLDKAERTAYDKILSFLVFLDSLQSNNLP-TVSEYITANEVNLCLHIQAF 119

Query: 123 EEAVHSHTFQYIITSL 138
           +E +HS ++ Y++ ++
Sbjct: 120 QECIHSQSYSYMLDTI 135


>gi|325268390|ref|ZP_08135022.1| ribonucleotide-diphosphate reductase beta subunit [Prevotella
           multiformis DSM 16608]
 gi|324989244|gb|EGC21195.1| ribonucleotide-diphosphate reductase beta subunit [Prevotella
           multiformis DSM 16608]
          Length = 348

 Score = 54.3 bits (129), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 67/136 (49%), Gaps = 9/136 (6%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           NT  +P    + R+    +RM+   + ++N    +KY W  + Y  A NN W+P E+ + 
Sbjct: 8   NTLFNPSGDTDLRL----RRMIGGNTTNLNDFNNMKYSWVSDWYRQAMNNFWIPEEINLS 63

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D   +K    L   ER    + L F    +SL +NN+   +  +++  E    L  QAF
Sbjct: 64  QD---FKDYPRLDKAERTAYDKILSFLVFLDSLQSNNLP-TVSEYITANEVNLCLHIQAF 119

Query: 123 EEAVHSHTFQYIITSL 138
           +E +HS ++ Y++ ++
Sbjct: 120 QECIHSQSYSYMLDTI 135


>gi|296282225|ref|ZP_06860223.1| ribonucleotide-diphosphate reductase subunit beta [Citromicrobium
           bathyomarinum JL354]
          Length = 354

 Score = 54.3 bits (129), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA++ +      HWMP EVP+ +D   W  K  L++ ER ++ +   FF  ++  
Sbjct: 12  PFEYPWAYDFWKRQQQVHWMPEEVPLGEDCRDWAQK--LSEHERNLLTQIFRFFTQADVE 69

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V +       R     E +  L   +  E +H   + +++ ++G+ E E + M+ E   +
Sbjct: 70  VQDCYHEKYGRVFKPTEIKMMLASFSNMETIHIAAYSHLLDTIGMPESE-YGMFLEYEEM 128

Query: 156 TAKANWALQY 165
             K ++  Q+
Sbjct: 129 KDKHDYLQQF 138


>gi|34482564|emb|CAE09564.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE BETA CHAIN [Wolinella
           succinogenes]
          Length = 283

 Score = 54.3 bits (129), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 47/78 (60%)

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
           GLT  E+L   R L      +SL  NN++  +  ++++PE    L+RQAFEEA+HS ++ 
Sbjct: 11  GLTPAEKLGYDRALSQLIFMDSLQTNNLIDNVNPYITSPEINLILVRQAFEEALHSQSYA 70

Query: 133 YIITSLGLDEGELFNMYR 150
            ++ S+  +  E++ M+R
Sbjct: 71  VMVESISANTDEIYEMWR 88


>gi|85710107|ref|ZP_01041172.1| ribonucleotide reductase beta subunit [Erythrobacter sp. NAP1]
 gi|85688817|gb|EAQ28821.1| ribonucleotide reductase beta subunit [Erythrobacter sp. NAP1]
          Length = 346

 Score = 54.3 bits (129), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 6/143 (4%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           +L AR   N   P +Y WA+E +      HWMP EVP+ +D   W     LT+ ER ++ 
Sbjct: 3   LLEAR---NTYKPFEYPWAYEFWKRQQQIHWMPEEVPLGEDCRDW--AQNLTEHERNLLT 57

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
           +   FF  ++  V +       R     E +  L   +  E VH   + +++ ++G+ E 
Sbjct: 58  QIFRFFTQADVEVQDCYHDKYGRVFKPTEIKMMLAAFSNMETVHIAAYSHLLDTIGMPES 117

Query: 144 ELFNMYREVPSITAKANWALQYT 166
           E ++ + +   +  K N+  Q++
Sbjct: 118 E-YSAFLDYEEMADKHNYMHQFS 139


>gi|212693366|ref|ZP_03301494.1| hypothetical protein BACDOR_02879 [Bacteroides dorei DSM 17855]
 gi|237710423|ref|ZP_04540904.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
           9_1_42FAA]
 gi|237726931|ref|ZP_04557412.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
           D4]
 gi|212664010|gb|EEB24584.1| hypothetical protein BACDOR_02879 [Bacteroides dorei DSM 17855]
 gi|229433787|gb|EEO43864.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           dorei 5_1_36/D4]
 gi|229455145|gb|EEO60866.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
           9_1_42FAA]
          Length = 349

 Score = 54.3 bits (129), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 5/126 (3%)

Query: 14  EKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
           E   ++  +RM+   + ++N    ++Y W  + Y  A NN W+P E+ +  D    K   
Sbjct: 15  EGDTDLRHRRMIGGNTTNLNDFNNMRYKWVSDWYRQAMNNFWIPEEINLTQDT---KDYP 71

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
            L   ER    + L F    +SL +NN+   I  +++  E    L  QAF+E VHS ++ 
Sbjct: 72  HLDQAERTAYDKILSFLVFLDSLQSNNLP-TISEYITANEVNLCLHIQAFQECVHSQSYS 130

Query: 133 YIITSL 138
           Y++ S+
Sbjct: 131 YMLDSI 136


>gi|265756566|ref|ZP_06090772.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp.
           3_1_33FAA]
 gi|263233754|gb|EEZ19369.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp.
           3_1_33FAA]
          Length = 349

 Score = 54.3 bits (129), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 5/126 (3%)

Query: 14  EKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
           E   ++  +RM+   + ++N    ++Y W  + Y  A NN W+P E+ +  D    K   
Sbjct: 15  EGDTDLRHRRMIGGNTTNLNDFNNMRYKWVSDWYRQAMNNFWIPEEINLTQDT---KDYP 71

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
            L   ER    + L F    +SL +NN+   I  +++  E    L  QAF+E VHS ++ 
Sbjct: 72  HLDQAERTAYDKILSFLVFLDSLQSNNLP-TISEYITANEVNLCLHIQAFQECVHSQSYS 130

Query: 133 YIITSL 138
           Y++ S+
Sbjct: 131 YMLDSI 136


>gi|282879357|ref|ZP_06288101.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           buccalis ATCC 35310]
 gi|282881358|ref|ZP_06290037.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           timonensis CRIS 5C-B1]
 gi|281298554|gb|EFA90979.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           buccalis ATCC 35310]
 gi|281304764|gb|EFA96845.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           timonensis CRIS 5C-B1]
          Length = 347

 Score = 54.3 bits (129), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 5/118 (4%)

Query: 22  KRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           +RM+   + ++N    +KY WA + Y  A NN W+P E+ +  D    K    L   ER 
Sbjct: 21  RRMIGGNTTNLNDFNNMKYQWASDWYRQAMNNFWIPEEINLTQDT---KDYPRLDKAERT 77

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
              + L F    +SL +NN+  ++  +++  E    L  QAF+E VHS ++ Y++ ++
Sbjct: 78  AYDKILSFLVFLDSLQSNNLP-SLCEYITANEVNLCLHIQAFQECVHSQSYSYMLDTI 134


>gi|260591988|ref|ZP_05857446.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           veroralis F0319]
 gi|260536272|gb|EEX18889.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           veroralis F0319]
          Length = 348

 Score = 54.3 bits (129), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 5/118 (4%)

Query: 22  KRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           +RM+   + ++N    +KY W  + Y  A NN W+P E+ +  D   +K    L   ER 
Sbjct: 22  RRMIGGNTTNLNDFNNMKYSWVSDWYRQAMNNFWIPEEINLSQD---FKDYPRLDKAERT 78

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
              + L F    +SL +NN+   +  +++  E    L  QAF+E +HS ++ Y++ ++
Sbjct: 79  AYDKILSFLVFLDSLQSNNLP-TVSEYITANEVNLCLHIQAFQECIHSQSYSYMLDTI 135


>gi|288801822|ref|ZP_06407264.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           melaninogenica D18]
 gi|302344783|ref|YP_003813136.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           melaninogenica ATCC 25845]
 gi|288335864|gb|EFC74297.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           melaninogenica D18]
 gi|302149273|gb|ADK95535.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           melaninogenica ATCC 25845]
          Length = 348

 Score = 54.3 bits (129), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 9/136 (6%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           NT  +P    E R+    +RM+   + ++N    +KY W  + Y  A NN W+P E+ + 
Sbjct: 8   NTLFNPSGDIELRL----RRMIGGNTTNLNDFNNMKYSWVSDWYRQAMNNFWIPEEINLS 63

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D   +K    L   ER    + L F    +SL +NN+   +  +++  E    L  QAF
Sbjct: 64  QD---FKDYPRLEKAERTAYDKILSFLVFLDSLQSNNLP-TLSEYITANEVNLCLHIQAF 119

Query: 123 EEAVHSHTFQYIITSL 138
           +E +HS ++ Y++ ++
Sbjct: 120 QECIHSQSYSYMLDTI 135


>gi|293401949|ref|ZP_06646089.1| ribonucleoside-diphosphate reductase, beta subunit
           [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291304607|gb|EFE45856.1| ribonucleoside-diphosphate reductase, beta subunit
           [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 347

 Score = 54.3 bits (129), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 66/131 (50%), Gaps = 5/131 (3%)

Query: 9   PIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           P+       +V ++RM+N  + ++N    +KY W  + Y  A NN W+P E+ +  D+  
Sbjct: 8   PLFNEHGDCDVINRRMINGNTTNLNDFNNMKYTWVSDWYRQAMNNFWIPEEINLNQDV-- 65

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
            K    L+  E+    + L F    +S+   N+   +  +++  E    L  QAF+EA+H
Sbjct: 66  -KDYRRLSQAEKNAYDKTLSFLIFLDSIQTANLP-NVGDYITANEVNLCLTIQAFQEALH 123

Query: 128 SHTFQYIITSL 138
           S ++ Y++ S+
Sbjct: 124 SQSYSYMLDSI 134


>gi|257467364|ref|ZP_05631675.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|315918494|ref|ZP_07914734.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|313692369|gb|EFS29204.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           gonidiaformans ATCC 25563]
          Length = 344

 Score = 54.3 bits (129), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 4/102 (3%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +K+ WA + Y +   N W+P +V +  D   +++   LT  ER      L F    +S+ 
Sbjct: 34  VKFTWATQLYRTMMANFWIPEKVDLTQDKNDYEN---LTVPEREAYDGILSFLIFLDSIQ 90

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            NN V  I  +++ PE    L  Q F+EA+HS ++QYII S+
Sbjct: 91  TNN-VPNISDYVTAPEVNLLLSIQTFQEAIHSQSYQYIIESI 131


>gi|257453171|ref|ZP_05618470.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium sp.
           3_1_5R]
 gi|317059706|ref|ZP_07924191.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 3_1_5R]
 gi|313685382|gb|EFS22217.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 3_1_5R]
          Length = 344

 Score = 54.3 bits (129), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 4/102 (3%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +K+ WA + Y +   N W+P +V +  D   +++   LT  ER      L F    +S+ 
Sbjct: 34  VKFTWATQLYRTMMANFWIPEKVDLTQDKNDYEN---LTVPEREAYDGILSFLIFLDSIQ 90

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            NN V  I  +++ PE    L  Q F+EA+HS ++QYII S+
Sbjct: 91  TNN-VPNISDYVTAPEVNLLLSIQTFQEAIHSQSYQYIIESI 131


>gi|254781153|ref|YP_003065566.1| hypothetical protein CLIBASIA_05300 [Candidatus Liberibacter
          asiaticus str. psy62]
 gi|254040830|gb|ACT57626.1| hypothetical protein CLIBASIA_05300 [Candidatus Liberibacter
          asiaticus str. psy62]
          Length = 30

 Score = 54.3 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/25 (96%), Positives = 25/25 (100%)

Query: 1  MANNTGLSPIQAGEKRVNVDDKRML 25
          MANNTGLSPIQAGEKRVNVDDKR+L
Sbjct: 1  MANNTGLSPIQAGEKRVNVDDKRIL 25


>gi|332185556|ref|ZP_08387304.1| ribonucleotide reductase, small chain family protein [Sphingomonas
           sp. S17]
 gi|332014534|gb|EGI56591.1| ribonucleotide reductase, small chain family protein [Sphingomonas
           sp. S17]
          Length = 351

 Score = 53.9 bits (128), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 2/113 (1%)

Query: 32  NQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFAS 91
            Q  P +Y WA+E +      HW+P EVP+ +D   W  K  LTD ER ++ +   FF  
Sbjct: 8   KQYKPFEYPWAFEFWKRQQQLHWLPEEVPLGEDCRDWAQK--LTDHERNLLTQIFRFFTQ 65

Query: 92  SESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE 144
           ++  V +       R     E +  L   +  E VH   + +++ ++G+ E E
Sbjct: 66  ADVEVQDCYHEKYGRVFKPTEVKMMLTAFSNMETVHIAAYSHLLDTIGMPESE 118


>gi|313894221|ref|ZP_07827786.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           oral taxon 158 str. F0412]
 gi|313441045|gb|EFR59472.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           oral taxon 158 str. F0412]
          Length = 342

 Score = 53.9 bits (128), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 55/102 (53%), Gaps = 4/102 (3%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA + Y +  NN W+P E+ + +D+   K    LTD ER    + + F    +S+ 
Sbjct: 32  IKYDWANQMYRTMLNNFWIPEEISLNEDV---KQFPYLTDYERRAFDKIIAFLNFLDSIQ 88

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           + N+   + R+++  E    L  Q F+E +H+ ++ YI+ ++
Sbjct: 89  SENLP-NLSRYITASEVASLLNIQTFQEEIHAQSYSYILDTV 129


>gi|299472857|emb|CBN80426.1| EsV-1-128 [Ectocarpus siliculosus]
          Length = 419

 Score = 53.9 bits (128), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 6/128 (4%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           +Y   ++ Y       W+  E+ M  D   W   +  + DE+  +K  L FFAS + +V 
Sbjct: 116 EYADVFQLYKKQTALFWVVEEIDMSGDSKDW---DDASSDEKHFLKLVLAFFASLDQIVM 172

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV---PS 154
            NI L     +  P+ RQ+   Q   EAVH  ++  +I +   D  E  ++ R +   P 
Sbjct: 173 ENIGLNFKNEIVIPQIRQHFAIQEATEAVHGESYSLLIQTYFRDTEEQRHVMRSIQTMPI 232

Query: 155 ITAKANWA 162
           I  KA WA
Sbjct: 233 IEKKALWA 240


>gi|257462865|ref|ZP_05627271.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium sp.
           D12]
          Length = 348

 Score = 53.9 bits (128), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 4/102 (3%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +K+ WA + Y +   N W+P +V +  D   +++   LT  ER      L F    +S+ 
Sbjct: 38  VKFSWATQLYRTMMANFWIPEKVDLTQDKNDYEN---LTVPEREAYDGILSFLIFLDSIQ 94

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            NN+   I  +++ PE    L  Q F+EA+HS ++QYII S+
Sbjct: 95  TNNLP-NISDYITAPEVNLLLSIQTFQEAIHSQSYQYIIESI 135


>gi|317060491|ref|ZP_07924976.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. D12]
 gi|313686167|gb|EFS23002.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. D12]
          Length = 344

 Score = 53.9 bits (128), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 4/102 (3%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +K+ WA + Y +   N W+P +V +  D   +++   LT  ER      L F    +S+ 
Sbjct: 34  VKFSWATQLYRTMMANFWIPEKVDLTQDKNDYEN---LTVPEREAYDGILSFLIFLDSIQ 90

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            NN+   I  +++ PE    L  Q F+EA+HS ++QYII S+
Sbjct: 91  TNNLP-NISDYITAPEVNLLLSIQTFQEAIHSQSYQYIIESI 131


>gi|148554425|ref|YP_001262007.1| ribonucleotide-diphosphate reductase subunit beta [Sphingomonas
           wittichii RW1]
 gi|148499615|gb|ABQ67869.1| Ribonucleoside-diphosphate reductase [Sphingomonas wittichii RW1]
          Length = 350

 Score = 53.9 bits (128), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 4/119 (3%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA+E +      HW+P EVP+ +D   W  K  LTD ER ++ +   FF  ++  
Sbjct: 12  PFEYPWAFEYWKRQQQLHWLPEEVPLGEDCRDWAQK--LTDHERNLLTQIFRFFTQADVE 69

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL--FNMYREV 152
           V +       R     E +  L   +  E VH   + +++ ++G+ E E   F  Y+E+
Sbjct: 70  VQDCYHDKYGRVFKPTEIKMMLTAFSNMETVHIAAYSHLLDTIGMPETEYSAFLQYKEM 128


>gi|327198722|emb|CCA61423.1| unnamed protein product [Diadromus pulchellus ascovirus 4a]
          Length = 395

 Score = 53.9 bits (128), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 7/117 (5%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y   + K+     +HW+P EVPM DD+  W   N L D+++  +     FF   +  
Sbjct: 12  PFQYEQFYNKWKVHERSHWLPAEVPMHDDVHDW--NNRLDDNQKKFLTNIFRFFTQGDVD 69

Query: 96  VANNIVLAIYRHL-SNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYRE 151
           VA         +    PE   ++   A  EAVH   + ++I +LG+ E    + YRE
Sbjct: 70  VAGAYCSEYLPNFCETPEIAMFMCSVAAREAVHIDAYSHLIETLGMPE----STYRE 122


>gi|294013210|ref|YP_003546670.1| ribonucleoside-diphosphate reductase beta chain [Sphingobium
           japonicum UT26S]
 gi|292676540|dbj|BAI98058.1| ribonucleoside-diphosphate reductase beta chain [Sphingobium
           japonicum UT26S]
          Length = 351

 Score = 53.9 bits (128), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 4/119 (3%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA+E +      HW+P EVP+ +D   W  K  L+D ER ++ +   FF  ++  
Sbjct: 12  PFEYPWAYEFWKRQQQLHWLPEEVPLGEDCRDWAQK--LSDHERNLLTQIFRFFTQADVE 69

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL--FNMYREV 152
           V +       R     E +  L   +  E VH   + +++ ++G+ E E   F  Y+E+
Sbjct: 70  VQDCYHEKYGRVFKPTEIKMMLTAFSNMETVHIAAYSHLLDTIGMPESEYSAFMQYKEM 128


>gi|291165654|gb|EFE27703.1| ribonucleoside-diphosphate reductase, beta subunit [Filifactor
           alocis ATCC 35896]
          Length = 348

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 72/145 (49%), Gaps = 7/145 (4%)

Query: 17  VNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           + +  +RM+N  + ++N    +KY W  + Y  A NN W+P E+ +  D+   K    L 
Sbjct: 17  IELSKRRMINGNTTNLNDFNNMKYTWVSDWYRHAMNNFWIPEEINLTQDI---KDYRNLE 73

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
            +E+    + L F    +SL   N+   +   ++  E    L  QA++EA+HS ++ YI+
Sbjct: 74  IEEKEAYDKILSFLIFLDSLQTANLP-NVGEFITANEVNLCLTIQAYQEAIHSQSYGYIL 132

Query: 136 TSLGLDE--GELFNMYREVPSITAK 158
            S+   E   E+   +++ P + A+
Sbjct: 133 DSICSPEERTEILYQWKDDPFLLAR 157


>gi|323343338|ref|ZP_08083565.1| ribonucleotide-diphosphate reductase beta subunit [Prevotella
           oralis ATCC 33269]
 gi|323095157|gb|EFZ37731.1| ribonucleotide-diphosphate reductase beta subunit [Prevotella
           oralis ATCC 33269]
          Length = 349

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 5/118 (4%)

Query: 22  KRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           +RM+   + ++N    ++Y WA + Y  A NN W+P E+ +  D    K    L   ER 
Sbjct: 23  RRMIGGNTTNLNDFNNMRYPWASDWYRQAMNNFWIPEEINLAQDT---KDYPRLDKAERA 79

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
              + L F    +SL +NN+   I  +++  E    L  QAF+E VHS ++ Y++ ++
Sbjct: 80  AYDKILSFLVFLDSLQSNNLP-TISEYITANEVNLCLHIQAFQECVHSQSYSYMLDTI 136


>gi|325475472|gb|EGC78653.1| ribonucleoside-diphosphate reductase [Treponema denticola F0402]
          Length = 351

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 64/123 (52%), Gaps = 5/123 (4%)

Query: 17  VNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           +    ++M+   + ++N    +KY WA + Y  A NN W+P E+ M  D+  ++    L+
Sbjct: 20  IETHKRKMIGGNTTNLNDFNNMKYSWASDWYRQAMNNFWIPEEINMTTDVQDYRK---LS 76

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
             E+    + L F    +S+   N+   + ++++  E    L  QAF+EAVHS ++ Y++
Sbjct: 77  GPEKTAYDKILSFLIFLDSIQTANLP-NVGQYVTANEVNLCLTIQAFQEAVHSQSYSYML 135

Query: 136 TSL 138
            ++
Sbjct: 136 DTI 138


>gi|157803769|ref|YP_001492318.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           canadensis str. McKiel]
 gi|157785032|gb|ABV73533.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           canadensis str. McKiel]
          Length = 324

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 61/121 (50%), Gaps = 8/121 (6%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA++ + +    HW+P EVP+ DD+  WK    LT  E+ ++ +   FF  ++ +
Sbjct: 12  PFSYPWAYDAWHTQQKIHWLPEEVPLADDVKDWKY--NLTPGEKHLLTQIFRFFTQAD-I 68

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFE--EAVHSHTFQYIITSLGLDEGEL--FNMYRE 151
             NN  +  Y  +  P     ++  AF   E +H   + +++ ++G+ E E   F  Y+E
Sbjct: 69  EVNNCYMKHYSRVFKP-TEILMMLSAFSNMETIHIAAYSHLLDTVGMPEVEYSAFLKYKE 127

Query: 152 V 152
           +
Sbjct: 128 M 128


>gi|138894466|ref|YP_001124919.1| ribonucleoside-diphosphate reductase subunit beta [Geobacillus
           thermodenitrificans NG80-2]
 gi|196247935|ref|ZP_03146637.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. G11MC16]
 gi|134265979|gb|ABO66174.1| Ribonucleoside-diphosphate reductase beta subunit [Geobacillus
           thermodenitrificans NG80-2]
 gi|196212719|gb|EDY07476.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. G11MC16]
          Length = 344

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 67/142 (47%), Gaps = 7/142 (4%)

Query: 24  MLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMI 82
           M+N R S+V     + Y WA+ KY     N W P E+ M  D+  +        D  L I
Sbjct: 20  MINGRCSNVLNWDDIAYPWAYAKYKRMLANFWTPFEINMAQDVKQFPQLTAREQDAFLKI 79

Query: 83  KRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GL 140
              L    S ++  A  +      ++++P     ++  A +E +H+H++ Y+++SL    
Sbjct: 80  IGLLALLDSIQTDYAGRVA----DYITDPSINALMIMLAQQEVIHNHSYSYVLSSLVPKA 135

Query: 141 DEGELFNMYREVPSITAKANWA 162
            + E+F+ +R  P++  + ++ 
Sbjct: 136 KQDEVFDFWRNEPTLRKRNDFV 157


>gi|253567022|ref|ZP_04844473.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp.
           3_2_5]
 gi|265764336|ref|ZP_06092904.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp.
           2_1_16]
 gi|15290503|gb|AAK92210.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides
           fragilis 638R]
 gi|251944146|gb|EES84655.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp.
           3_2_5]
 gi|263256944|gb|EEZ28290.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp.
           2_1_16]
 gi|301163665|emb|CBW23219.1| putative ribonucleoside-diphosphate reductase beta chain
           [Bacteroides fragilis 638R]
          Length = 349

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 9/139 (6%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEV 59
           +  N   +P    E R+    ++M+   + ++N    ++Y W  + Y  A NN W+P E+
Sbjct: 6   LKKNALFNPEGDTETRL----RKMIGGNTTNLNDFNNMRYKWVSDWYRQAMNNFWIPEEI 61

Query: 60  PMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLR 119
            +  D    K    LT  ER    + L F    +SL +NN+   +  +++  E    L  
Sbjct: 62  NLTQDT---KDYPHLTPAERTAYDKILSFLVFLDSLQSNNLP-TLSEYITANEVNLCLHI 117

Query: 120 QAFEEAVHSHTFQYIITSL 138
           QAF+E VHS ++ Y++ S+
Sbjct: 118 QAFQECVHSQSYSYMLDSI 136


>gi|154505112|ref|ZP_02041850.1| hypothetical protein RUMGNA_02625 [Ruminococcus gnavus ATCC 29149]
 gi|153794591|gb|EDN77011.1| hypothetical protein RUMGNA_02625 [Ruminococcus gnavus ATCC 29149]
          Length = 347

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 5/118 (4%)

Query: 22  KRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           +RM+   + ++N    L+Y W    Y  A NN W+P E+ +  D+   K    LT++ER 
Sbjct: 21  RRMIGGNTTNLNDFNNLRYTWVNNWYRQAMNNFWIPEEINLSQDI---KDYPNLTENERT 77

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
              + L F    +S+   N+   I  +++  E    L  Q F+E VHS ++ Y++ S+
Sbjct: 78  AYNKILSFLVFLDSIQTANLP-CIGEYITANEINLCLSIQTFQECVHSQSYSYMLDSI 134


>gi|325831705|ref|ZP_08164922.1| ribonucleoside-diphosphate reductase, beta subunit [Eggerthella sp.
           HGA1]
 gi|325486576|gb|EGC89025.1| ribonucleoside-diphosphate reductase, beta subunit [Eggerthella sp.
           HGA1]
          Length = 347

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 5/123 (4%)

Query: 17  VNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
            +V D+RM+   + ++N    +KY W  + Y  A NN W+P E+ +  D+   K    L 
Sbjct: 16  TDVLDRRMIGGNTTNLNDFNNMKYEWVSDWYRQAMNNFWIPEEINLGVDI---KDYRKLP 72

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
             ER    + L F    +SL + N+  A+  +++  E    L  Q F+E VHS ++ Y++
Sbjct: 73  ASERRAYDKILSFLIFLDSLQSANLP-AVGEYITANEVNLCLAIQTFQETVHSQSYSYML 131

Query: 136 TSL 138
            ++
Sbjct: 132 DTI 134


>gi|320527966|ref|ZP_08029132.1| ribonucleoside-diphosphate reductase, beta subunit [Solobacterium
           moorei F0204]
 gi|320131592|gb|EFW24156.1| ribonucleoside-diphosphate reductase, beta subunit [Solobacterium
           moorei F0204]
          Length = 349

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 68/131 (51%), Gaps = 5/131 (3%)

Query: 9   PIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           P+   E  ++V ++R++N  + ++N    +KY W  + Y  A NN W+P E+ +  D + 
Sbjct: 10  PLFNPEGDIDVRNRRLINFNTTNINDFNNMKYNWVSDWYRQAMNNFWVPEEINLNQDKSD 69

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           +     L+  E+    + L F    +SL + N+   I ++++  E    L  Q F+E +H
Sbjct: 70  YPR---LSLAEKTAYDKILSFLVYLDSLQSANLP-NISQYITANEVNLCLSIQTFQECIH 125

Query: 128 SHTFQYIITSL 138
           S ++ Y++ S+
Sbjct: 126 SQSYSYMLDSI 136


>gi|307565004|ref|ZP_07627521.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           amnii CRIS 21A-A]
 gi|307346317|gb|EFN91637.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           amnii CRIS 21A-A]
          Length = 347

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 5/118 (4%)

Query: 22  KRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           +RM+   S ++N    ++Y W  + Y  A NN W+P E+ +  D+   K    L   ER 
Sbjct: 21  RRMIGGNSTNLNDFNNMRYSWVSDWYRQAMNNFWIPEEINLAQDI---KDYPNLPAAERK 77

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
              + L F    +SL +NN+   I  +++  E    L  Q F+E VHS ++ Y++ ++
Sbjct: 78  AYDKILSFLVFLDSLQSNNLP-TISEYITANEVNLCLHIQTFQECVHSQSYSYMLDTI 134


>gi|229827460|ref|ZP_04453529.1| hypothetical protein GCWU000182_02849 [Abiotrophia defectiva ATCC
           49176]
 gi|229788398|gb|EEP24512.1| hypothetical protein GCWU000182_02849 [Abiotrophia defectiva ATCC
           49176]
          Length = 354

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 63/119 (52%), Gaps = 6/119 (5%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY WA   Y +  NN W+P E+ + +D+   K  + LT  ER    + + F    +S+ 
Sbjct: 44  IKYDWANVMYRTMLNNFWIPEEISLGEDI---KQFSYLTAGERKAFDKIISFLNFLDSIQ 100

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELFNMYREVP 153
             N+   + R+++  E    L  QAF+E +H+ ++ YI+ ++   +   ++++ +RE P
Sbjct: 101 CENLP-NLARYITAAEVASLLNVQAFQEEIHAQSYSYILDTVTNPVTRDKIYDEWREDP 158


>gi|307295356|ref|ZP_07575195.1| Ribonucleoside-diphosphate reductase [Sphingobium chlorophenolicum
           L-1]
 gi|306878859|gb|EFN10078.1| Ribonucleoside-diphosphate reductase [Sphingobium chlorophenolicum
           L-1]
          Length = 351

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 4/119 (3%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA+E +      HW+P EVP+ +D   W  K  L+D ER ++ +   FF  ++  
Sbjct: 12  PFEYPWAYEYWKRQQQLHWLPEEVPLGEDCRDWAQK--LSDHERNLLTQIFRFFTQADVE 69

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL--FNMYREV 152
           V +       R     E +  L   +  E VH   + +++ ++G+ E E   F  Y+E+
Sbjct: 70  VQDCYHDKYGRVFKPTEIKMMLTAFSNMETVHIAAYSHLLDTIGMPETEYSAFMQYKEM 128


>gi|67459102|ref|YP_246726.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia felis
           URRWXCal2]
 gi|67004635|gb|AAY61561.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia felis
           URRWXCal2]
          Length = 327

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 8/121 (6%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA+E + +    HW+P EVP+ DD+  WK    L   E+ ++ +   FF  ++ +
Sbjct: 12  PFSYPWAYEAWHTQQKIHWLPEEVPLADDVKDWKY--NLAPGEKHLLTQIFRFFTQAD-I 68

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFE--EAVHSHTFQYIITSLGLDEGEL--FNMYRE 151
             NN  +  Y  +  P     ++  AF   E VH   + +++ ++G+ E E   F  Y+E
Sbjct: 69  EVNNCYMKHYSRVFKP-TEILMMLSAFSNMETVHIAAYSHLLDTVGMPEVEYSAFLKYKE 127

Query: 152 V 152
           +
Sbjct: 128 M 128


>gi|330814259|ref|YP_004358498.1| ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487354|gb|AEA81759.1| ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Candidatus Pelagibacter sp. IMCC9063]
          Length = 345

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 6/120 (5%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y W ++ +L+    HW+P EVP+ +D+  W+ K  L   E+ ++ +   FF  ++  
Sbjct: 35  PFRYPWCYDAWLTQQRIHWLPEEVPLAEDVRDWQKK--LLPHEKNLLTQIFRFFTQADVE 92

Query: 96  VANNIVLAIYRHLSNP-ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL--FNMYREV 152
           V NN  L  Y  +  P E    +   A  E VH   + +++ ++G+ E E   F  Y+E+
Sbjct: 93  V-NNCYLRHYTTVFKPTEVLMMMTAFASMETVHVAAYSHLLDTIGMPETEYSAFLKYKEM 151


>gi|282860353|ref|ZP_06269421.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           bivia JCVIHMP010]
 gi|282586851|gb|EFB92088.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           bivia JCVIHMP010]
          Length = 347

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 5/118 (4%)

Query: 22  KRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           +RM+   + ++N    ++Y W  + Y  A NN W+P E+ +  D+   K    L   ER 
Sbjct: 21  RRMIGGNTTNLNDFNNMRYSWVSDWYRQAMNNFWIPEEINLAQDI---KDYPNLPPAERK 77

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
              + L F    +SL +NN+   I  +++  E    L  Q F+E VHS ++ Y++ S+
Sbjct: 78  AYDKILSFLVFLDSLQSNNLP-TISEYITANEVNLCLHIQTFQECVHSQSYSYMLDSI 134


>gi|266623614|ref|ZP_06116549.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           hathewayi DSM 13479]
 gi|288864591|gb|EFC96889.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           hathewayi DSM 13479]
          Length = 346

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 5/131 (3%)

Query: 9   PIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           P+   +   +V ++RM+   + ++N    +KY W  + Y  A NN W+P E+ +  D+  
Sbjct: 8   PLFNPDGDTDVRNRRMIGGNTTNLNDFNNMKYTWVSDWYRQAMNNFWVPEEINLGPDV-- 65

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
            K    L   ER    + L F    +S+   N+  AI  +++  E    L  Q F+EAVH
Sbjct: 66  -KDYPMLDAGERRAYDKILSFLVFLDSIQTANLP-AIGEYITANEINLCLSIQTFQEAVH 123

Query: 128 SHTFQYIITSL 138
           S ++ Y++ ++
Sbjct: 124 SQSYSYMLDTI 134


>gi|256846215|ref|ZP_05551673.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_36A2]
 gi|256719774|gb|EEU33329.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_36A2]
          Length = 344

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 11/132 (8%)

Query: 14  EKRVNVDDKRMLNAR-------SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           +K  N +    LNAR       +++  L  ++  WA + Y +   N W+P +V +  D  
Sbjct: 4   KKLFNPEGDDTLNARKIIKGNSTNLFNLNNVRCQWANQLYRTMMANFWIPEKVDLTQDKN 63

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +++   LT  ER      L F    +S+  NNI   I  H++ PE    L  Q F+EA+
Sbjct: 64  DYEN---LTVPEREAYDGILSFLIFLDSIQTNNIP-NISDHVTAPEVNLLLAIQTFQEAI 119

Query: 127 HSHTFQYIITSL 138
           HS ++QYII S+
Sbjct: 120 HSQSYQYIIESI 131


>gi|153814165|ref|ZP_01966833.1| hypothetical protein RUMTOR_00374 [Ruminococcus torques ATCC 27756]
 gi|317499963|ref|ZP_07958199.1| ribonucleoside-diphosphate reductase [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331087814|ref|ZP_08336739.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 3_1_46FAA]
 gi|145848561|gb|EDK25479.1| hypothetical protein RUMTOR_00374 [Ruminococcus torques ATCC 27756]
 gi|316898680|gb|EFV20715.1| ribonucleoside-diphosphate reductase [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330409509|gb|EGG88950.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 3_1_46FAA]
          Length = 353

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 5/131 (3%)

Query: 9   PIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           P+   +   +V  +RM+   + ++N    LKY WA E Y  A NN W+P E+ +  D+  
Sbjct: 14  PLFNPDGDTDVLKRRMIGGNTTNLNDYNNLKYTWASEWYRQAMNNFWIPEEINLSQDI-- 71

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
            K    L+  ER    + L F    +S+   N+   +  +++  E    L  Q F+E VH
Sbjct: 72  -KDYPNLSPAERKAYDKILSFLVFLDSIQTANLP-CVGEYITANEVNLCLNIQTFQECVH 129

Query: 128 SHTFQYIITSL 138
           S ++ Y++ ++
Sbjct: 130 SQSYSYMLDTI 140


>gi|323486976|ref|ZP_08092290.1| hypothetical protein HMPREF9474_04041 [Clostridium symbiosum
           WAL-14163]
 gi|323399688|gb|EGA92072.1| hypothetical protein HMPREF9474_04041 [Clostridium symbiosum
           WAL-14163]
          Length = 347

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 5/123 (4%)

Query: 17  VNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
            ++  +RM+N  + ++N    +KY W    Y  A NN W+P E+ +  D+   K    LT
Sbjct: 16  TDLQSRRMINGNTTNLNDFNNMKYTWVSGWYRQAMNNFWVPEEINLGTDV---KDYPLLT 72

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
             ER    + L F    +S+   N+  AI  +++  E    L  Q F+EAVHS ++ Y++
Sbjct: 73  VGERRAYDKILSFLVFLDSIQTANLP-AIGEYITANEINLCLSIQIFQEAVHSQSYSYML 131

Query: 136 TSL 138
            ++
Sbjct: 132 DTI 134


>gi|262277047|ref|ZP_06054840.1| ribonucleoside-diphosphate reductase, beta subunit [alpha
           proteobacterium HIMB114]
 gi|262224150|gb|EEY74609.1| ribonucleoside-diphosphate reductase, beta subunit [alpha
           proteobacterium HIMB114]
          Length = 342

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 61/120 (50%), Gaps = 6/120 (5%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y W ++ +L+    HW+P E+P+ +D+  W+    LT  E+ ++ +   FF  ++  
Sbjct: 32  PFRYPWCYDAWLTQQRIHWLPEEIPLAEDVRDWQK--NLTAHEKNLLTQIFRFFTQADVE 89

Query: 96  VANNIVLAIYRHLSNP-ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL--FNMYREV 152
           V NN  L  Y  +  P E    +   A  E +H   + +++ ++G+ E E   F  Y+E+
Sbjct: 90  V-NNCYLRHYTTVFKPTEVLMMMTAFASMETIHVAAYSHLLDTIGMPESEYSAFLKYKEM 148


>gi|60682187|ref|YP_212331.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           fragilis NCTC 9343]
 gi|60493621|emb|CAH08410.1| putative ribonucleoside-diphosphate reductase beta chain
           [Bacteroides fragilis NCTC 9343]
          Length = 349

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 4/110 (3%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
           +++N    ++Y W  + Y  A NN W+P E+ +  D    K    LT  ER    + L F
Sbjct: 31  TNLNDFNNMRYQWVSDWYRQAMNNFWIPEEINLTQDT---KDYPHLTPAERTAYDKILSF 87

Query: 89  FASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
               +SL +NN+   +  +++  E    L  QAF+E VHS ++ Y++ S+
Sbjct: 88  LVFLDSLQSNNLP-TLSEYITANEVNLCLHIQAFQECVHSQSYSYMLDSI 136


>gi|157825769|ref|YP_001493489.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia akari
           str. Hartford]
 gi|157799727|gb|ABV74981.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia akari
           str. Hartford]
          Length = 327

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 8/121 (6%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA+  + +    HW+P EVP+ DD+  WK    LT  E+ ++ +   FF  ++ +
Sbjct: 12  PFSYPWAYTAWHTQQKIHWLPEEVPLADDVKDWKY--NLTPGEKHLLTQIFRFFTQAD-I 68

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFE--EAVHSHTFQYIITSLGLDEGEL--FNMYRE 151
             NN  +  Y  +  P     ++  AF   E VH   + +++ ++G+ E E   F  Y+E
Sbjct: 69  EVNNCYMKHYSRVFKP-TEILMMLSAFSNMETVHIAAYSHLLDTVGMPEVEYSAFLKYKE 127

Query: 152 V 152
           +
Sbjct: 128 M 128


>gi|323692021|ref|ZP_08106269.1| ribonucleoside-diphosphate reductase [Clostridium symbiosum
           WAL-14673]
 gi|323503944|gb|EGB19758.1| ribonucleoside-diphosphate reductase [Clostridium symbiosum
           WAL-14673]
          Length = 347

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 5/123 (4%)

Query: 17  VNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
            ++  +RM+N  + ++N    +KY W    Y  A NN W+P E+ +  D+   K    LT
Sbjct: 16  TDLQSRRMINGNTTNLNDFNNMKYTWVSGWYRQAMNNFWVPEEINLGTDV---KDYPLLT 72

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
             ER    + L F    +S+   N+  AI  +++  E    L  Q F+EAVHS ++ Y++
Sbjct: 73  VGERRAYDKILSFLVFLDSIQTANLP-AIGEYITANEINLCLSIQIFQEAVHSQSYSYML 131

Query: 136 TSL 138
            ++
Sbjct: 132 DTI 134


>gi|303237757|ref|ZP_07324316.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           disiens FB035-09AN]
 gi|302482043|gb|EFL45079.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           disiens FB035-09AN]
          Length = 349

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 5/118 (4%)

Query: 22  KRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           +RM+   + ++N    +KY W  + Y  A NN W+P E+ +  D+   K    L   ER 
Sbjct: 23  RRMIGGNTTNLNDFNNMKYVWVSDWYRQAMNNFWIPEEINLAQDI---KDYPNLPQAERT 79

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
              + L F    +SL +NN+   I  +++  E    L  Q F+E +HS ++ Y++ ++
Sbjct: 80  AYDKILSFLVFLDSLQSNNLP-TISEYITANEVNLCLHIQTFQECIHSQSYSYMLDTI 136


>gi|56551339|ref|YP_162178.1| ribonucleotide-diphosphate reductase subunit beta [Zymomonas
           mobilis subsp. mobilis ZM4]
 gi|241760992|ref|ZP_04759081.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|260753042|ref|YP_003225935.1| ribonucleotide-diphosphate reductase subunit beta [Zymomonas
           mobilis subsp. mobilis NCIMB 11163]
 gi|56542913|gb|AAV89067.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241374611|gb|EER64072.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|258552405|gb|ACV75351.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 345

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 4/119 (3%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA+E +      HW+P EVP+ +D   W  K  L+D ER ++ +   FF  ++  
Sbjct: 12  PFEYPWAFEFWQRQQQLHWLPEEVPLGEDCRDWAQK--LSDHERNLLTQIFRFFTQADVE 69

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL--FNMYREV 152
           V +       R     E +  L   +  E VH   + +++ ++G+ E E   F  Y+E+
Sbjct: 70  VQDCYFDKYGRIFRPTEIKMMLTAFSNMETVHIAAYSHLLDTIGMPETEYSAFLQYKEM 128


>gi|269865627|ref|XP_002651990.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063361|gb|EED42066.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 290

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 6/121 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W   EV M  D   + +   LT +E+  IK  L FFA+S+ +V  N+V      +   E 
Sbjct: 7   WTVEEVDMTFDCEHFST---LTPNEQFFIKYVLAFFAASDGIVNENLVERFSSEVQILEA 63

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLS 170
           + +   Q   E +HS  +  +I +L  D+ E   LFN    +PSI  KA WA ++  + +
Sbjct: 64  KMFYGFQIAIENIHSEMYSKLIETLIRDKEEQTYLFNAIENIPSIRKKALWAQKWIASDT 123

Query: 171 S 171
           S
Sbjct: 124 S 124


>gi|15639047|ref|NP_218493.1| ribonucleotide-diphosphate reductase subunit beta [Treponema
           pallidum subsp. pallidum str. Nichols]
 gi|189025287|ref|YP_001933059.1| ribonucleotide-diphosphate reductase subunit beta [Treponema
           pallidum subsp. pallidum SS14]
 gi|6093976|sp|O83092|RIR2_TREPA RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|3322311|gb|AAC65049.1| ribonucleoside-diphosphate reductase, subunit beta (nrdB)
           [Treponema pallidum subsp. pallidum str. Nichols]
 gi|189017862|gb|ACD70480.1| ribonucleoside-diphosphate reductase, subunit beta [Treponema
           pallidum subsp. pallidum SS14]
 gi|291059468|gb|ADD72203.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           pallidum subsp. pallidum str. Chicago]
          Length = 351

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 69/129 (53%), Gaps = 7/129 (5%)

Query: 11  QAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           +AG+  + +  +RM+   + ++N    +KY W  + Y  A NN W+P E+ M  D+  ++
Sbjct: 16  EAGD--IELHKRRMVGGNTTNLNDFNNMKYPWVSKWYRQAMNNFWIPEEINMSSDVQDYR 73

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
           +   L+  E+    + L F    +S+   N+   I ++++  E    L  QAF+EAVHS 
Sbjct: 74  N---LSAIEKTAYDKILSFLIFLDSIQTANLP-NIGQYITANEINLCLTIQAFQEAVHSQ 129

Query: 130 TFQYIITSL 138
           ++ Y++ ++
Sbjct: 130 SYSYMLDTI 138


>gi|257792030|ref|YP_003182636.1| ribonucleotide-diphosphate reductase subunit beta [Eggerthella
           lenta DSM 2243]
 gi|317488666|ref|ZP_07947206.1| ribonucleotide reductase [Eggerthella sp. 1_3_56FAA]
 gi|257475927|gb|ACV56247.1| Ribonucleoside-diphosphate reductase [Eggerthella lenta DSM 2243]
 gi|316912225|gb|EFV33794.1| ribonucleotide reductase [Eggerthella sp. 1_3_56FAA]
          Length = 347

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 5/123 (4%)

Query: 17  VNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
            +V D+RM+   + ++N    +KY W  + Y  A NN W+P E+ +  D+   K    L 
Sbjct: 16  TDVLDRRMIGGNTTNLNDFNNMKYEWVSDWYRQAMNNFWIPEEINLGVDI---KDYRKLP 72

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
             ER    + L F    +SL + N+  A+  +++  E    L  Q F+E VHS ++ Y++
Sbjct: 73  AAERRAYDKILSFLIFLDSLQSANLP-AVGEYITANEVNLCLAIQTFQETVHSQSYSYML 131

Query: 136 TSL 138
            ++
Sbjct: 132 DTI 134


>gi|319902178|ref|YP_004161906.1| ribonucleotide reductase [Bacteroides helcogenes P 36-108]
 gi|319417209|gb|ADV44320.1| ribonucleotide reductase [Bacteroides helcogenes P 36-108]
          Length = 347

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 5/118 (4%)

Query: 22  KRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           +RM+   + ++N    ++Y W  + Y  A NN W+P E+ +  D    K    L   ER+
Sbjct: 21  RRMIGGNTTNLNDFNNMRYKWVSDWYRQAMNNFWIPEEINLTQDT---KDYPLLDKAERV 77

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
              + L F    +SL +NN+   +  +++  E    L  QAF+E VHS ++ Y++ S+
Sbjct: 78  AYDKILSFLVFLDSLQSNNLP-TLSEYITANEVNLCLHIQAFQECVHSQSYSYMLDSI 134


>gi|71280050|ref|YP_269047.1| ribonucleotide-diphosphate reductase subunit beta [Colwellia
           psychrerythraea 34H]
 gi|71145790|gb|AAZ26263.1| ribonucleotide reductase, beta subunit [Colwellia psychrerythraea
           34H]
          Length = 376

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 63/120 (52%), Gaps = 4/120 (3%)

Query: 42  AWEKYLSA-CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNI 100
           A+EK +    +  W P EV +  D A W+S   LTD E+ +   NL +    +S+ A ++
Sbjct: 36  AFEKLIEKQLSFFWRPEEVDVSKDRADWQS---LTDSEKHIFISNLKYQTLLDSMAARSV 92

Query: 101 VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKAN 160
              +   +S PE   ++   AF E +HS ++ +I+ +L  + GE+F+     P+I  +A+
Sbjct: 93  NAVLLPLVSLPEVETWVETWAFSETIHSRSYTHILRNLFTEPGEIFDDIIVNPAILKRAS 152


>gi|302386033|ref|YP_003821855.1| ribonucleotide reductase [Clostridium saccharolyticum WM1]
 gi|302196661|gb|ADL04232.1| ribonucleotide reductase [Clostridium saccharolyticum WM1]
          Length = 368

 Score = 52.8 bits (125), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 5/131 (3%)

Query: 9   PIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           P+   +    V  +RM+N  + ++N    +KY W  + Y  A NN W+P E+ +  D   
Sbjct: 29  PLFHPDGETEVRKRRMINGNTTNLNDFNNMKYTWVSDWYRQAMNNFWIPEEINLSRDR-- 86

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
            K    L+  ER    + L F    +S+   N+  A+  +++  E    L  Q F+EAVH
Sbjct: 87  -KDYPLLSPQERRAYDKILSFLVFLDSIQTANLP-ALGEYVTANEINLCLSIQTFQEAVH 144

Query: 128 SHTFQYIITSL 138
           S ++ Y++ ++
Sbjct: 145 SQSYSYMLDTI 155


>gi|256545921|ref|ZP_05473276.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
           vaginalis ATCC 51170]
 gi|256398343|gb|EEU11965.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
           vaginalis ATCC 51170]
          Length = 352

 Score = 52.8 bits (125), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 66/126 (52%), Gaps = 5/126 (3%)

Query: 14  EKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
           E  +++  +R++N  + ++N    +KY W  + Y  A NN W+P E+ +  D+  +++  
Sbjct: 18  EGDIDLSKRRIINGNTTNLNDFNNVKYTWTSDWYRQAMNNFWIPEEINLNQDIKDYRN-- 75

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
            L+  E+    R L F    +S+   N+   +  +++  E    L  Q ++EA+HS ++ 
Sbjct: 76  -LSKAEKKAYDRILSFLTYLDSIQTANLP-NLQTYITANEINLCLAIQTYQEAIHSQSYS 133

Query: 133 YIITSL 138
           YI+ ++
Sbjct: 134 YILDTI 139


>gi|88682973|gb|AAI05512.1| RRM2 protein [Bos taurus]
          Length = 338

 Score = 52.8 bits (125), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 7/114 (6%)

Query: 56  PTE-VPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECR 114
           P+E V +  D+  W++   L  +ER  I   L FFA+S+ +V  N+V    + +   E R
Sbjct: 52  PSEPVDLSKDIQHWEA---LKSEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEAR 108

Query: 115 QYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
            +   Q   E +HS  +  +I +   D  E   LFN    +P +  KA+WAL++
Sbjct: 109 CFYGFQIAMENIHSEMYSLLIDTYIKDSKEREFLFNAIETMPCVKKKADWALRW 162


>gi|167760514|ref|ZP_02432641.1| hypothetical protein CLOSCI_02888 [Clostridium scindens ATCC 35704]
 gi|167661880|gb|EDS06010.1| hypothetical protein CLOSCI_02888 [Clostridium scindens ATCC 35704]
          Length = 347

 Score = 52.8 bits (125), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 7/128 (5%)

Query: 12  AGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
           +G+ +VN   +RM+   + ++N    +KY W  + Y  A NN W+P E+ M  D+   K 
Sbjct: 13  SGDTQVN--KRRMIGGNTTNLNDFNNMKYDWVSDWYRQAMNNFWIPEEINMGVDI---KD 67

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              L   ER    + L F    +S+   N+   I  +++  E    L  Q F+EAVHS +
Sbjct: 68  YRKLPQAERRAYDKILSFLIFLDSIQTANLP-NIGEYITANEVNLCLSIQTFQEAVHSQS 126

Query: 131 FQYIITSL 138
           + Y++ ++
Sbjct: 127 YSYMLDTI 134


>gi|76630263|ref|XP_880783.1| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 3 [Bos
           taurus]
 gi|297480612|ref|XP_002691528.1| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 2 [Bos
           taurus]
 gi|296482362|gb|DAA24477.1| ribonucleotide reductase M2 polypeptide isoform 2 [Bos taurus]
          Length = 341

 Score = 52.8 bits (125), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 7/114 (6%)

Query: 56  PTE-VPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECR 114
           P+E V +  D+  W++   L  +ER  I   L FFA+S+ +V  N+V    + +   E R
Sbjct: 55  PSEPVDLSKDIQHWEA---LKSEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEAR 111

Query: 115 QYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQY 165
            +   Q   E +HS  +  +I +   D  E   LFN    +P +  KA+WAL++
Sbjct: 112 CFYGFQIAMENIHSEMYSLLIDTYIKDSKEREFLFNAIETMPCVKKKADWALRW 165


>gi|13242599|ref|NP_077613.1| EsV-1-128 [Ectocarpus siliculosus virus 1]
 gi|13177402|gb|AAK14546.1|AF204951_128 EsV-1-128 [Ectocarpus siliculosus virus 1]
          Length = 419

 Score = 52.8 bits (125), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 6/128 (4%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           +Y   ++ Y       W+  E+ +  D   W+  +    DE+  +K  L FFAS + +V 
Sbjct: 116 EYADVFQLYKKQTALFWVVEEIDLSGDSKDWEDASS---DEKHFLKLVLAFFASLDQIVM 172

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV---PS 154
            NI L     +  P+ RQ+   Q   EAVH  ++  +I +   D  E  ++ R +   P 
Sbjct: 173 ENIGLNFKNEIVIPQIRQHFAIQEATEAVHGESYSLLIQTYFRDTEEQRHVMRSIQTMPI 232

Query: 155 ITAKANWA 162
           I  KA WA
Sbjct: 233 IEKKALWA 240


>gi|42525851|ref|NP_970949.1| ribonucleotide-diphosphate reductase subunit beta [Treponema
           denticola ATCC 35405]
 gi|41815901|gb|AAS10830.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           denticola ATCC 35405]
          Length = 351

 Score = 52.8 bits (125), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 64/123 (52%), Gaps = 5/123 (4%)

Query: 17  VNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           +    ++M+   + ++N    +KY WA + Y  A NN W+P E+ M  D+  ++    L+
Sbjct: 20  IETHKRKMIGGNTTNLNDFNNMKYSWASDWYRQAMNNFWIPEEINMTTDVQDYRK---LS 76

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
             E+    + L F    +S+   N+   + ++++  E    L  QAF+EAVHS ++ Y++
Sbjct: 77  IPEKTAYDKILSFLIFLDSIQTANLP-NVGQYVTANEVNLCLTIQAFQEAVHSQSYSYML 135

Query: 136 TSL 138
            ++
Sbjct: 136 DTI 138


>gi|299144102|ref|ZP_07037182.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus
           sp. oral taxon 386 str. F0131]
 gi|298518587|gb|EFI42326.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus
           sp. oral taxon 386 str. F0131]
          Length = 346

 Score = 52.8 bits (125), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 63/124 (50%), Gaps = 5/124 (4%)

Query: 17  VNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           V +  ++M+N  + ++N    +KY W  + Y +  NN W+P E+ M  D+  +++   L 
Sbjct: 15  VELTKRKMINGNTTNLNDFNNIKYTWVSDMYRTMMNNFWIPEEINMNQDIKDYRN---LD 71

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
             E+    + L F    +S+   N+   I  + +  E    L  QA++EA+HS ++ YI+
Sbjct: 72  FHEKKAYDKILSFLIFLDSIQTANLP-NISDYTTANEVNLILTIQAYQEAIHSQSYSYIL 130

Query: 136 TSLG 139
            ++ 
Sbjct: 131 DTIA 134


>gi|310831442|ref|YP_003970085.1| putative ribonucleoside-diphosphate reductase small subunit
           [Cafeteria roenbergensis virus BV-PW1]
 gi|309386626|gb|ADO67486.1| putative ribonucleoside-diphosphate reductase small subunit
           [Cafeteria roenbergensis virus BV-PW1]
          Length = 326

 Score = 52.4 bits (124), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 12/179 (6%)

Query: 18  NVD-DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           N+D ++ +L + +    + P+KY   W+ Y       W   E+    D   +K    L  
Sbjct: 3   NLDMNEELLKSENSRYTVFPIKYHKIWDLYKKMEAAFWTAEEIDWSKDKHDFKK---LNQ 59

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
           DE+  IK  L FF++S+++V  N+   +   +   E +     Q   E +HS  +   I 
Sbjct: 60  DEQRFIKYVLAFFSASDTIVNINLGERLSHEVQPLEAKIAYTFQMMMEGIHSEVYALQID 119

Query: 137 SLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           ++  D  E   + N    VP I AK +W L++ ++  S     +  R  +++++  L F
Sbjct: 120 NIIEDVQERKDILNSIETVPCIKAKTDWMLKWVKSEES-----FATRMVAQVISEGLFF 173


>gi|291562343|emb|CBL41159.1| Ribonucleotide reductase, beta subunit [butyrate-producing
           bacterium SS3/4]
          Length = 346

 Score = 52.4 bits (124), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 5/131 (3%)

Query: 9   PIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           P+   E  ++V  +RM+   + ++N    +KY W  + Y  A NN W+P E+ +  D+  
Sbjct: 7   PLFNPEGNLDVRLRRMIGGNTTNLNDFNNMKYAWVSDWYRQAMNNFWIPEEINLSQDV-- 64

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
            K    L   ER    + L F    +S+   N+   I  +++  E    L  QAF+E VH
Sbjct: 65  -KDYPRLLSAERSAYDKILSFLVFLDSIQTANLP-NIGAYITANEVNLCLSIQAFQECVH 122

Query: 128 SHTFQYIITSL 138
           S ++ Y++ ++
Sbjct: 123 SQSYSYMLDTI 133


>gi|212697417|ref|ZP_03305545.1| hypothetical protein ANHYDRO_01987 [Anaerococcus hydrogenalis DSM
           7454]
 gi|325846383|ref|ZP_08169352.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
 gi|212675609|gb|EEB35216.1| hypothetical protein ANHYDRO_01987 [Anaerococcus hydrogenalis DSM
           7454]
 gi|325481567|gb|EGC84607.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
          Length = 352

 Score = 52.4 bits (124), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 66/126 (52%), Gaps = 5/126 (3%)

Query: 14  EKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
           E  +++  +R++N  + ++N    +KY W  + Y  A NN W+P E+ +  D+  +++  
Sbjct: 18  EGDIDLSKRRIINGNTTNLNDFNNVKYTWTNDWYRQAMNNFWIPEEINLNQDIKDYRN-- 75

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
            L+  E+    R L F    +S+   N+   +  +++  E    L  Q ++EA+HS ++ 
Sbjct: 76  -LSKAEKKAYDRILSFLTYLDSIQTANLP-NLQTYITANEINLCLAIQTYQEAIHSQSYS 133

Query: 133 YIITSL 138
           YI+ ++
Sbjct: 134 YILDTI 139


>gi|53713986|ref|YP_099978.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           fragilis YCH46]
 gi|52216851|dbj|BAD49444.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides
           fragilis YCH46]
          Length = 349

 Score = 52.4 bits (124), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 9/139 (6%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEV 59
           +  N   +P    E R+    ++M+   + ++N    ++Y W  + Y    NN W+P E+
Sbjct: 6   LKKNALFNPEGDTETRL----RKMIGGNTTNLNDFNNMRYKWVSDWYRQGMNNFWIPEEI 61

Query: 60  PMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLR 119
            +  D    K    LT  ER    + L F    +SL +NN+   +  +++  E    L  
Sbjct: 62  NLTQDT---KDYPHLTPAERTAYDKILSFLVFLDSLQSNNLP-TLSEYITANEVNLCLHI 117

Query: 120 QAFEEAVHSHTFQYIITSL 138
           QAF+E VHS ++ Y++ S+
Sbjct: 118 QAFQECVHSQSYSYMLDSI 136


>gi|15604372|ref|NP_220888.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           prowazekii str. Madrid E]
 gi|51473694|ref|YP_067451.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia typhi
           str. Wilmington]
 gi|3861064|emb|CAA14964.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE BETA CHAIN (nrdB) [Rickettsia
           prowazekii]
 gi|51460006|gb|AAU03969.1| Ribonucleotide reductase [Rickettsia typhi str. Wilmington]
 gi|292572126|gb|ADE30041.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia
           prowazekii Rp22]
          Length = 324

 Score = 52.0 bits (123), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 8/121 (6%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA+E + +    HW+P EVP+  D+  WK    LT  E+ ++ +   FF  ++ +
Sbjct: 12  PFSYPWAYEAWHTQQKIHWLPEEVPLAYDVKDWKY--NLTPGEKHLLTQIFRFFTQAD-I 68

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFE--EAVHSHTFQYIITSLGLDEGEL--FNMYRE 151
             NN  +  Y  +  P     ++  AF   E VH   + +++ ++G+ E E   F  Y+E
Sbjct: 69  EVNNCYMKHYSRVFKP-TEVLMMLSAFSNMETVHIAAYSHLLDTVGMPEVEYSAFLKYKE 127

Query: 152 V 152
           +
Sbjct: 128 M 128


>gi|224539244|ref|ZP_03679783.1| hypothetical protein BACCELL_04146 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224519126|gb|EEF88231.1| hypothetical protein BACCELL_04146 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 349

 Score = 52.0 bits (123), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 4/110 (3%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
           +++N    ++Y W  + Y  A NN W+P E+ +  D    K    L + ER    + L F
Sbjct: 31  TNLNDFNNMRYKWVSDWYRQAMNNFWIPEEINLTQDT---KDYPLLDEAERTAYDKILSF 87

Query: 89  FASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
               +SL +NN+   I  +++  E    L  QAF+E VHS ++ Y++ ++
Sbjct: 88  LVFLDSLQSNNLP-TISEYITANEVNLCLHIQAFQECVHSQSYSYMLDTI 136


>gi|328722535|ref|XP_001944897.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Acyrthosiphon pisum]
          Length = 345

 Score = 52.0 bits (123), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+ Y   W  Y     + W    V ++ DL  W     +TD+ER  I   L F A+S 
Sbjct: 50  IFPIIYDNIWAMYKKHEASLWNIEAVNLKSDLEDWMR---MTDEERHFISYILAFLAASN 106

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V+ N+V    + +   E R +   Q   E +HS  +  +I +   D  E   L N   
Sbjct: 107 GIVSENLVKRFSQEVQVTEARCFYGFQIMIENIHSEMYSLLIDTYIKDPKEKETLINATE 166

Query: 151 EVPSITAKANWALQY 165
            +P +   A+W L++
Sbjct: 167 TMPCVKKMADWVLKW 181


>gi|325261084|ref|ZP_08127822.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp.
           D5]
 gi|324032538|gb|EGB93815.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp.
           D5]
          Length = 347

 Score = 52.0 bits (123), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 64/131 (48%), Gaps = 5/131 (3%)

Query: 9   PIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           P+   E  + V  ++M+   + ++N    +KY W  + Y  A NN W+P E+ +  D+  
Sbjct: 8   PLFNPEGDIEVTKRKMIGGNTTNLNDFNHMKYNWVSDWYRQAMNNFWVPEEINLSVDIKD 67

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           +K    L   ER    + L F    +S+   N+   I  +++  E    L  Q F+EAVH
Sbjct: 68  YKM---LPAAERRAYDKILSFLIFLDSIQTANLP-NIGEYITANEVNLCLSIQTFQEAVH 123

Query: 128 SHTFQYIITSL 138
           S ++ Y++ ++
Sbjct: 124 SQSYSYMLDTI 134


>gi|154174558|ref|YP_001409201.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           curvus 525.92]
 gi|112803525|gb|EAU00869.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           curvus 525.92]
          Length = 340

 Score = 52.0 bits (123), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 3/122 (2%)

Query: 18  NVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           N+ D+R+ N     +      KY WA + +     N W P EV   DD+  +     LTD
Sbjct: 14  NLTDRRVFNGNPHGILNFTKAKYQWALKLWDLMEANTWFPKEVDTTDDVRDYAY--NLTD 71

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
            E+ M         S +S   NN+   I  +++ PE    L RQA+EEA HS ++  ++ 
Sbjct: 72  AEKRMYDLVWSQLISMDSFQTNNLADNINPYITAPEINAVLSRQAYEEANHSKSYAVMVE 131

Query: 137 SL 138
           ++
Sbjct: 132 AI 133


>gi|229495919|ref|ZP_04389645.1| ribonucleoside-diphosphate reductase, beta subunit [Porphyromonas
           endodontalis ATCC 35406]
 gi|229317232|gb|EEN83139.1| ribonucleoside-diphosphate reductase, beta subunit [Porphyromonas
           endodontalis ATCC 35406]
          Length = 346

 Score = 52.0 bits (123), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 63/123 (51%), Gaps = 5/123 (4%)

Query: 17  VNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           + +  +R++N  + ++N    +KY W    Y +A NN W+P E+ +  D+   K    L+
Sbjct: 15  IELSKRRLINGNTTNLNDFNNIKYPWVSNWYRTAMNNFWIPEEINLSQDV---KDYRILS 71

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
             E+    + L F    +S+   N+   +  +++  E    L  QAF+EAVHS ++ Y++
Sbjct: 72  KAEKTAYDKILSFLIFLDSIQTANLP-NVGEYITANEVNLCLTIQAFQEAVHSQSYSYML 130

Query: 136 TSL 138
            ++
Sbjct: 131 DTI 133


>gi|255658865|ref|ZP_05404274.1| ribonucleoside-diphosphate reductase, beta subunit [Mitsuokella
           multacida DSM 20544]
 gi|260849270|gb|EEX69277.1| ribonucleoside-diphosphate reductase, beta subunit [Mitsuokella
           multacida DSM 20544]
          Length = 347

 Score = 52.0 bits (123), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 65/132 (49%), Gaps = 5/132 (3%)

Query: 9   PIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           P+   E  ++V  +R++   + ++N    LKY W  + Y  A NN W+P E+ +  D+  
Sbjct: 8   PLFNPEGDIDVTQRRLIGGNTTNMNDFNNLKYTWTADWYRQAMNNFWIPEEINLGQDV-- 65

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
            K    L   ER    + L F    +S+ + N+   +  +++  E    L  Q+F+E VH
Sbjct: 66  -KDYRQLPAAERRAYDKILSFLVFLDSVQSANLP-NVSAYITANEVDLCLTIQSFQECVH 123

Query: 128 SHTFQYIITSLG 139
           S ++ Y++ ++ 
Sbjct: 124 SQSYSYMLDTIA 135


>gi|296082342|emb|CBI21347.3| unnamed protein product [Vitis vinifera]
          Length = 227

 Score = 52.0 bits (123), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 3/112 (2%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           ++ ++ +L    D   + P++Y   WE Y  A  + W   EV +  D   W++   LT D
Sbjct: 3   SIPEEPLLAPNPDRFCMFPIQYPEVWEMYKKAEASFWTAEEVDLSQDQRQWEN---LTSD 59

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
           E+  I   L FFA+S+ +V  N+     + +   E R +   Q   E +HS 
Sbjct: 60  EKHFISHILAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSE 111


>gi|283768723|ref|ZP_06341634.1| ribonucleoside-diphosphate reductase, beta subunit [Bulleidia
           extructa W1219]
 gi|283104509|gb|EFC05882.1| ribonucleoside-diphosphate reductase, beta subunit [Bulleidia
           extructa W1219]
          Length = 348

 Score = 51.6 bits (122), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 5/139 (3%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLN-ARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEV 59
           M+      P+   E  ++V  +R+LN   +++N    +KY W    Y  A NN W+P E+
Sbjct: 1   MSKGIQRKPLFNPEGDIDVCHRRLLNFDTTNINDFNNMKYTWVSNWYRQAMNNFWIPEEI 60

Query: 60  PMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLR 119
            +  D + + +   L+  ER    + L F    +SL + N+   I  +++  E    L  
Sbjct: 61  NLNQDKSDYLN---LSLAERSAYDKILSFLVYLDSLQSANLP-NIASYVTANEVNLCLSI 116

Query: 120 QAFEEAVHSHTFQYIITSL 138
           Q F+E +HS ++ Y++ S+
Sbjct: 117 QTFQECIHSQSYSYMLDSI 135


>gi|190896480|gb|ACE96753.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 213

 Score = 51.6 bits (122), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 6/106 (5%)

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           DL  W++   LT DE+  I   L FFA+S+ +V  NI     + +   E R +   Q   
Sbjct: 1   DLGHWEN---LTPDEKHFISHVLAFFAASDGIVLENIAGRFMKEVQVSEARAFYGFQIAI 57

Query: 124 EAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYT 166
           E +HS  +  ++ +   D  E   LF+    VP +  KA WAL++ 
Sbjct: 58  ENIHSEMYSLLLETYIKDSTEKNRLFHAIETVPCVAKKAEWALRWI 103


>gi|20069937|ref|NP_613141.1| ribonucleotide reductase small subunit [Mamestra configurata NPV-A]
 gi|20043331|gb|AAM09166.1| ribonucleotide reductase small subunit [Mamestra configurata NPV-A]
 gi|33331769|gb|AAQ11077.1| putative ribonucleotide reductase small subunit-like protein
           [Mamestra configurata NPV-A]
          Length = 313

 Score = 51.6 bits (122), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 5/137 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+ +   +E Y  A    W   EV +  D   ++ K  L +D+R  I   LGFF++++
Sbjct: 8   LYPIVHEDLYEAYKRAEACFWRMEEVDLSKDYDDFQLK--LNNDQRHFIMHVLGFFSAAD 65

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
           S+V  N++  + + +   E   +   QA  E VH+  +  +I  L  D+     + N + 
Sbjct: 66  SIVNINVLNYMLQTVPELEAVYFYTFQAAMENVHTQMYGTLIIELIPDKKHQDLILNAFD 125

Query: 151 EVPSITAKANWALQYTQ 167
            VP +  K +WAL++ +
Sbjct: 126 NVPCVRKKDDWALKWIE 142


>gi|190896432|gb|ACE96729.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896434|gb|ACE96730.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896436|gb|ACE96731.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896438|gb|ACE96732.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896440|gb|ACE96733.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896444|gb|ACE96735.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896446|gb|ACE96736.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896448|gb|ACE96737.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896450|gb|ACE96738.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896452|gb|ACE96739.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896454|gb|ACE96740.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896456|gb|ACE96741.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896458|gb|ACE96742.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896460|gb|ACE96743.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896462|gb|ACE96744.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896464|gb|ACE96745.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896466|gb|ACE96746.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896468|gb|ACE96747.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896470|gb|ACE96748.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896472|gb|ACE96749.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896474|gb|ACE96750.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896476|gb|ACE96751.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896478|gb|ACE96752.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896482|gb|ACE96754.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896484|gb|ACE96755.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896486|gb|ACE96756.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896488|gb|ACE96757.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896492|gb|ACE96759.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896494|gb|ACE96760.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896496|gb|ACE96761.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896498|gb|ACE96762.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896500|gb|ACE96763.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896502|gb|ACE96764.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896504|gb|ACE96765.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896506|gb|ACE96766.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 213

 Score = 51.6 bits (122), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 6/106 (5%)

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           DL  W++   LT DE+  I   L FFA+S+ +V  NI     + +   E R +   Q   
Sbjct: 1   DLGHWEN---LTPDEKHFISHVLAFFAASDGIVLENIAGRFMKEVQVSEARAFYGFQIAI 57

Query: 124 EAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYT 166
           E +HS  +  ++ +   D  E   LF+    VP +  KA WAL++ 
Sbjct: 58  ENIHSEMYSLLLETYIKDSTEKNRLFHAIETVPCVAKKAEWALRWI 103


>gi|325294459|ref|YP_004280973.1| ribonucleotide reductase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325064907|gb|ADY72914.1| ribonucleotide reductase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 352

 Score = 51.6 bits (122), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 4/110 (3%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
           +++  L  +KY WA + Y     N W+P  V +  D+  +K    LT+DER      L F
Sbjct: 34  TNIFNLNDVKYEWATKLYRVMMANFWIPETVDLTQDVLDYKE---LTEDERQAYDEILSF 90

Query: 89  FASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
               +S+   NI   I  ++  PE    L   A++EA+HS ++ Y I S+
Sbjct: 91  LVFLDSIQTTNIP-NIAAYVKAPEITIDLSIHAYQEAIHSQSYGYTIESV 139


>gi|255008714|ref|ZP_05280840.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           fragilis 3_1_12]
 gi|313146449|ref|ZP_07808642.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           fragilis 3_1_12]
 gi|313135216|gb|EFR52576.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           fragilis 3_1_12]
          Length = 349

 Score = 51.6 bits (122), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 4/110 (3%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
           +++N    + Y W  + Y  A NN W+P E+ +  D    K    L   ER    + L F
Sbjct: 31  TNLNDFNNMHYKWVSDWYRQAMNNFWIPEEINLTQDT---KDYPHLDKAERTAYDKILSF 87

Query: 89  FASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
               +SL +NN+   I  +++  E    L  QAF+E VHS ++ Y++ S+
Sbjct: 88  LVFLDSLQSNNLP-TISEYITANEVNLCLHIQAFQECVHSQSYSYMLDSI 136


>gi|332018842|gb|EGI59398.1| Ribonucleoside-diphosphate reductase subunit M2 [Acromyrmex
           echinatior]
          Length = 176

 Score = 51.6 bits (122), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 3/112 (2%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPM-QDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
           + P++Y   W+ Y  A  + W   EV + + D   W  K  L  DE+  I   L FFA+S
Sbjct: 66  IFPIQYPDIWDMYKKAVASFWTIEEVSLHKQDKKDWNEK--LNSDEKRFISHVLAFFAAS 123

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE 144
           + +V  N++    + +  PE R +   Q   E +HS  +  +I +   D  E
Sbjct: 124 DGIVNENLIEKFSQEVKIPEARCFYGFQIAIENIHSEMYSLLIETYISDPKE 175


>gi|132618|sp|P26713|RIR2_ASFM2 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
          Length = 327

 Score = 51.6 bits (122), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 6/135 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+++   W  Y    +  W   EV M  D+  W++   +   +R   K+ L FF  ++
Sbjct: 14  IFPIQHPECWNWYKKLESMTWTAQEVDMCKDIDDWEA---MPKPQREFYKQILAFFVVAD 70

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N++    R +   E   +   QA +E VHS  +   + +L  DE E   +F+   
Sbjct: 71  EIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKEQQRIFSGIE 130

Query: 151 EVPSITAKANWALQY 165
           + P I   A W  Q+
Sbjct: 131 KHPIIKKMAQWVRQW 145


>gi|215275539|sp|P0C8I1|RIR2_ASFP4 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
          Length = 327

 Score = 51.6 bits (122), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 10/137 (7%)

Query: 34  LLPLKY--GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFAS 91
           + P+++   W W K L +    W   EV M  D+  W++   +   +R   K+ L FF  
Sbjct: 14  IFPIQHPECWNWYKKLESLT--WTAQEVDMCKDIDDWEA---MPKSQREFYKQILAFFVV 68

Query: 92  SESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNM 148
           ++ +V  N++    R +   E   +   QA +E VHS  +   + +L  DE E   +F+ 
Sbjct: 69  ADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKEQQRIFSG 128

Query: 149 YREVPSITAKANWALQY 165
             + P I   A W  Q+
Sbjct: 129 IEKHPIIKKMAQWVRQW 145


>gi|295103295|emb|CBL00839.1| Ribonucleotide reductase, beta subunit [Faecalibacterium
           prausnitzii SL3/3]
          Length = 347

 Score = 51.2 bits (121), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 5/131 (3%)

Query: 9   PIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           P+   E   +V  +RM+   + ++N    +KY W  + Y  A NN W+P E+ +  D+  
Sbjct: 8   PLFNPEGDPDVRLRRMIGGNTTNLNDFNNMKYAWVSDWYRQAMNNFWIPEEINLSQDV-- 65

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
            K    L   ER    + L F    +S+   N+   I  +++  E    L  QAF+E VH
Sbjct: 66  -KDYPRLLSTERSAYDKILSFLVFLDSIQTANLP-NIGAYITANEVNLCLSIQAFQECVH 123

Query: 128 SHTFQYIITSL 138
           S ++ Y++ ++
Sbjct: 124 SQSYSYMLDTI 134


>gi|22549454|ref|NP_689227.1| putative ribonucleotide reductase small subunit-like protein
           [Mamestra configurata NPV-B]
 gi|22476633|gb|AAM95039.1| putative ribonucleotide reductase small subunit-like protein
           [Mamestra configurata NPV-B]
          Length = 313

 Score = 51.2 bits (121), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 69/137 (50%), Gaps = 5/137 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+ +   +E Y  A    W   EV +  D   ++ K  L +D+R  I   LGFF++++
Sbjct: 8   LYPIVHEDLYEAYKRAEACFWRMEEVDLSKDYDDFQLK--LNNDQRHFIMHVLGFFSAAD 65

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
           S+V  N++  + + +   E   +   QA  E VH+  +  +I +L  D+ +   + N + 
Sbjct: 66  SIVNINVLDYMLQTVPELEAVYFYTFQAAMENVHTQMYGTLIITLIPDKKQQDLILNAFD 125

Query: 151 EVPSITAKANWALQYTQ 167
            +  +  K +WAL++T+
Sbjct: 126 NISCVRKKDDWALKWTK 142


>gi|162849254|emb|CAN10143.1| Ribonucleotide reductase small subunit [African swine fever virus
           Benin 97/1]
          Length = 327

 Score = 51.2 bits (121), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 10/137 (7%)

Query: 34  LLPLKY--GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFAS 91
           + P+++   W W K L +    W   EV M  D+  W++   +   +R   K+ L FF  
Sbjct: 14  IFPIQHPECWNWYKKLESLT--WTAQEVDMCKDIDDWEA---MPKPQREFYKQILAFFVV 68

Query: 92  SESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNM 148
           ++ +V  N++    R +   E   +   QA +E VHS  +   + +L  DE E   +F+ 
Sbjct: 69  ADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKEQQRIFSG 128

Query: 149 YREVPSITAKANWALQY 165
             + P I   A W  Q+
Sbjct: 129 IEKHPIIKKMAQWVRQW 145


>gi|162849427|emb|CAN10392.1| Ribonucleotide reductase small subunit [African swine fever virus
           OURT 88/3]
 gi|291289488|emb|CBH29145.1| BA71V-F334L [African swine fever virus E75]
 gi|303398729|emb|CBW46710.1| F334L [African swine fever virus Georgia 2007/1]
          Length = 334

 Score = 50.8 bits (120), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 10/137 (7%)

Query: 34  LLPLKY--GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFAS 91
           + P+++   W W K L +    W   EV M  D+  W++   +   +R   K+ L FF  
Sbjct: 21  IFPIQHPECWNWYKKLESLT--WTAQEVDMCKDIDDWEA---MPKPQREFYKQILAFFVV 75

Query: 92  SESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNM 148
           ++ +V  N++    R +   E   +   QA +E VHS  +   + +L  DE E   +F+ 
Sbjct: 76  ADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKEQQRIFSG 135

Query: 149 YREVPSITAKANWALQY 165
             + P I   A W  Q+
Sbjct: 136 IEKHPIIKKMAQWVRQW 152


>gi|215275540|sp|P0C8I2|RIR2_ASFWA RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
          Length = 327

 Score = 50.8 bits (120), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 10/137 (7%)

Query: 34  LLPLKY--GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFAS 91
           + P+++   W W K L +    W   EV M  D+  W++   +   +R   K+ L FF  
Sbjct: 14  IFPIQHPECWNWYKKLESLT--WTAQEVDMCKDIDDWEA---MPKPQREFYKQILAFFVV 68

Query: 92  SESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNM 148
           ++ +V  N++    R +   E   +   QA +E VHS  +   + +L  DE E   +F+ 
Sbjct: 69  ADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKEQQRIFSG 128

Query: 149 YREVPSITAKANWALQY 165
             + P I   A W  Q+
Sbjct: 129 IEKHPIIKKMAQWVRQW 145


>gi|9628152|ref|NP_042738.1| ribonucleotide reductase small subunit [African swine fever virus]
 gi|1172939|sp|P42492|RIR2_ASFB7 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|780414|gb|AAA65274.1| ribonucleotide reductase small subunit [African swine fever virus]
 gi|1097433|prf||2113434AT ribonucleotide reductase:SUBUNIT=small
          Length = 334

 Score = 50.8 bits (120), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 10/137 (7%)

Query: 34  LLPLKY--GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFAS 91
           + P+++   W W K L +    W   EV M  D+  W++   +   +R   K+ L FF  
Sbjct: 21  IFPIQHPECWNWYKKLESLT--WTAQEVDMCKDIDDWEA---MPKPQREFYKQILAFFVV 75

Query: 92  SESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNM 148
           ++ +V  N++    R +   E   +   QA +E VHS  +   + +L  DE E   +F+ 
Sbjct: 76  ADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKEQQRIFSG 135

Query: 149 YREVPSITAKANWALQY 165
             + P I   A W  Q+
Sbjct: 136 IEKHPIIKKMAQWVRQW 152


>gi|331083185|ref|ZP_08332301.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 6_1_63FAA]
 gi|330404574|gb|EGG84114.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 6_1_63FAA]
          Length = 347

 Score = 50.8 bits (120), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 5/123 (4%)

Query: 17  VNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
            +V  +RM+   + ++N    ++YGW  + Y  A NN W+P E+ +  D    K    L 
Sbjct: 16  TDVRFRRMIGGNTTNLNDFNNMRYGWVKDWYRQAMNNFWIPEEINLSQDR---KDYGELL 72

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
             ER    + L F    +S+ + N+   I  +++  E    L  Q F+E VHS ++ Y++
Sbjct: 73  GKERQAYDKILSFLVFLDSIQSANLP-CIGEYITANEINLCLSIQTFQECVHSQSYSYML 131

Query: 136 TSL 138
            ++
Sbjct: 132 DTI 134


>gi|313115920|ref|ZP_07801347.1| ribonucleoside-diphosphate reductase, beta subunit
           [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310621684|gb|EFQ05212.1| ribonucleoside-diphosphate reductase, beta subunit
           [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 347

 Score = 50.8 bits (120), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 5/131 (3%)

Query: 9   PIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           P+   E   +V  +RM+   + ++N    +KY W  + Y  A NN W+P E+ +  D+  
Sbjct: 8   PLFNPEGDPDVRLRRMIGGNTTNLNDFNNMKYAWVSDWYRQAMNNFWIPEEINLSQDV-- 65

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
            K    L   ER    + L F    +S+   N+   I  +++  E    L  QAF+E VH
Sbjct: 66  -KDYPRLLSAERSAYDKILSFLVFLDSIQTANLP-NIGAYITANEVNLCLSIQAFQECVH 123

Query: 128 SHTFQYIITSL 138
           S ++ Y++ ++
Sbjct: 124 SQSYSYMLDTI 134


>gi|281207436|gb|EFA81619.1| hypothetical protein PPL_05610 [Polysphondylium pallidum PN500]
          Length = 1292

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 5/105 (4%)

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
           +D+  W+ K  L D+ER +I   LGFF S   ++  NI+      +  PE R +   Q  
Sbjct: 62  NDVRDWQCK--LDDNERYLISNILGFFVSIAGIINENIITHFMSEVQIPEARTFYSMQIA 119

Query: 123 EEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQ 164
            E + S  +  +I +   D  E   +FN    +P +  K  W L+
Sbjct: 120 MENIQSEKYSLLIDAYIKDTDEKSKIFNAIESIPCVKRKCEWLLK 164


>gi|331086748|ref|ZP_08335825.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 9_1_43BFAA]
 gi|330409914|gb|EGG89349.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 9_1_43BFAA]
          Length = 347

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 66/128 (51%), Gaps = 7/128 (5%)

Query: 12  AGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
           AG+  V +  +R++   + ++N    +KY W  + Y  A NN W+P E+ +  D+  +++
Sbjct: 13  AGDTEVRL--RRIVGGNTTNLNDFNNMKYSWVSDWYRQAMNNFWIPEEINLGADVRDYRT 70

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              L   ER    + L F    +S+   N+   I  +++  E    L  QAF+EAVHS +
Sbjct: 71  ---LPAPERRAYDKILSFLVFLDSIQTANLP-NISEYITANEVNLCLSIQAFQEAVHSQS 126

Query: 131 FQYIITSL 138
           + Y++ ++
Sbjct: 127 YSYMLDTI 134


>gi|325663145|ref|ZP_08151595.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 4_1_37FAA]
 gi|325470599|gb|EGC73829.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 4_1_37FAA]
          Length = 347

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 66/128 (51%), Gaps = 7/128 (5%)

Query: 12  AGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
           AG+  V +  +R++   + ++N    +KY W  + Y  A NN W+P E+ +  D+  +++
Sbjct: 13  AGDTEVRL--RRIVGGNTTNLNDFNNMKYSWVSDWYRQAMNNFWIPEEINLGADVRDYRT 70

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              L   ER    + L F    +S+   N+   I  +++  E    L  QAF+EAVHS +
Sbjct: 71  ---LPAPERRAYDKILSFLVFLDSIQTANLP-NISEYITANEVNLCLSIQAFQEAVHSQS 126

Query: 131 FQYIITSL 138
           + Y++ ++
Sbjct: 127 YSYMLDTI 134


>gi|291239432|ref|XP_002739627.1| PREDICTED: hCG23833-like [Saccoglossus kowalevskii]
          Length = 309

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 17/131 (12%)

Query: 43  WEKYLSACNNHWMPTEVPM-QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
           W+K++      W   E+ +   DL  W   N LT DER   K  LGFFAS+  +V++N+ 
Sbjct: 18  WKKHVRC---FWTKDEINITSSDLREW---NDLTPDERQFFKCILGFFASTNIIVSDNLA 71

Query: 102 LAIYRHLSNP----ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV---PS 154
           L   R L++P    E R +   Q   E +HS T+  ++T+   +E E   +   +   P 
Sbjct: 72  L---RFLADPNISREARCFYSFQIAMENIHSETYIELLTAYVPEEKERNELLYSIISWPC 128

Query: 155 ITAKANWALQY 165
           +  K+ WA+++
Sbjct: 129 LNVKSRWAVKW 139


>gi|48696741|ref|YP_024565.1| ORF20 [Ostreid herpesvirus 1]
 gi|81986458|sp|Q6R7K3|RIR2_OSHVF RecName: Full=Ribonucleoside-diphosphate reductase small chain
 gi|41352405|gb|AAS00912.1| ORF20 [Ostreid herpesvirus 1]
          Length = 579

 Score = 50.8 bits (120), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 9/113 (7%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W  TE+  + D+  W+    ++++ER  +++ L FFA  ++LV + I +        PEC
Sbjct: 94  WQQTEIDAESDIPTWEQ---ISENERDCVRKVLAFFAVGDTLVKDRIAI-FADEFPLPEC 149

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDE---GELFNMYR--EVPSITAKANW 161
           + ++  Q   E VH   +   + +L  D+    +L N Y+  E   I  K +W
Sbjct: 150 KDFIDWQTVNEGVHQRVYNNYLDALVKDKIYLADLVNAYKDPEFAPIKKKVDW 202


>gi|85375147|ref|YP_459209.1| ribonucleotide-diphosphate reductase subunit beta [Erythrobacter
           litoralis HTCC2594]
 gi|84788230|gb|ABC64412.1| ribonucleotide reductase beta subunit [Erythrobacter litoralis
           HTCC2594]
          Length = 356

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 2/109 (1%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA++ +      HWMP EVP+ +D   W  K  +T+ ER ++ +   FF  ++  
Sbjct: 12  PFEYPWAYDFWKRQQQIHWMPEEVPLGEDCRDWAQK--ITEHERNLLTQIFRFFTQADVE 69

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE 144
           V +       R     E +  L   +  E VH   + +++ ++G+ E E
Sbjct: 70  VQDCYHDKYGRVFKPTEIKMMLTAFSNMETVHIAAYSHLLDTIGMPESE 118


>gi|215275538|sp|P0C8I0|RIR2_ASFK5 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
          Length = 327

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 10/137 (7%)

Query: 34  LLPLKY--GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFAS 91
           + P+++   W W K L +    W   EV M  D+  W++   +   +R   K+ L FF  
Sbjct: 14  IFPIQHPECWNWYKKLESLT--WTAQEVDMCKDIDDWEA---MPKPQREFYKQILAFFVV 68

Query: 92  SESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNM 148
           ++ +V  N++    R +   E   +   QA +E VHS  +   + +L  DE E   +F+ 
Sbjct: 69  ADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKEQQRIFSG 128

Query: 149 YREVPSITAKANWALQY 165
             + P I   A W  Q+
Sbjct: 129 IEKHPIIRKMAQWVQQW 145


>gi|172054963|ref|YP_001806290.1| ribonucleoside-diphosphate reductase subunit beta [Cyanothece sp.
           ATCC 51142]
 gi|171701244|gb|ACB54224.1| ribonucleoside-diphosphate reductase beta subunit [Cyanothece sp.
           ATCC 51142]
          Length = 347

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 70/144 (48%), Gaps = 6/144 (4%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
           ++V  L   +YGWA   Y +    +W+P    +  D   + +   L   ER  +K  L +
Sbjct: 31  TNVINLNETRYGWARTIYQTMREGYWIPQRTDLSQDKLDYVN---LIPGERRALKGILSY 87

Query: 89  FASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELF 146
               +S+   NI   + R+++ PE R  L  Q  +EA+H  T+QYI  S+    ++ E++
Sbjct: 88  LNFLDSVQVANIP-ELSRYITAPEARMCLAEQTSQEAMHGETYQYITESIIPENEQHEVY 146

Query: 147 NMYREVPSITAKANWALQYTQTLS 170
           + +++   +  +  +   Y QTL+
Sbjct: 147 DFWKKDLLLNERCEFIASYYQTLA 170


>gi|225568010|ref|ZP_03777035.1| hypothetical protein CLOHYLEM_04083 [Clostridium hylemonae DSM
           15053]
 gi|225163184|gb|EEG75803.1| hypothetical protein CLOHYLEM_04083 [Clostridium hylemonae DSM
           15053]
          Length = 355

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 5/123 (4%)

Query: 17  VNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
            +V  +RM+   + ++N    +KY W  + Y  A NN W+P E+ +  D+   K    L 
Sbjct: 24  TDVRSRRMIGGNTTNLNDFNNMKYTWVSDWYRQAMNNFWIPEEISLGVDI---KDYPRLP 80

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
            +ER    + L F    +S+   N+   I  +++  E    L  Q F+EAVHS ++ Y++
Sbjct: 81  AEERRAYDKILSFLIFLDSIQTANLP-HIGEYITANEINLCLSIQTFQEAVHSQSYSYML 139

Query: 136 TSL 138
            ++
Sbjct: 140 DTI 142


>gi|210616053|ref|ZP_03290925.1| hypothetical protein CLONEX_03144 [Clostridium nexile DSM 1787]
 gi|210149961|gb|EEA80970.1| hypothetical protein CLONEX_03144 [Clostridium nexile DSM 1787]
          Length = 355

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 5/123 (4%)

Query: 17  VNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           + V  ++M+   + ++N    +KY W    Y  A NN W+P E+ +  D+   K    L 
Sbjct: 24  IQVQKRKMIGGNTTNLNDFNNMKYTWVSGWYRQAMNNFWIPEEINLGVDI---KDYRNLP 80

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
             E+    + L F    +S+   N+   I  +++  E    L  QAF+EAVHS ++ Y++
Sbjct: 81  KAEKRAYDKILSFLIFLDSIQTANLP-GISEYITANEVNLCLSIQAFQEAVHSQSYSYML 139

Query: 136 TSL 138
            ++
Sbjct: 140 DTI 142


>gi|88608725|ref|YP_506404.1| ribonucleotide-diphosphate reductase subunit beta [Neorickettsia
           sennetsu str. Miyayama]
 gi|88600894|gb|ABD46362.1| ribonucleoside-diphosphate reductase, beta subunit [Neorickettsia
           sennetsu str. Miyayama]
          Length = 322

 Score = 50.1 bits (118), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 4/119 (3%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA++ +      HW+P E+PM DD+  W  K  +   E+ ++ +   FF  ++  
Sbjct: 12  PFQYDWAYQAWEIQQKIHWLPEEIPMADDVQDWHHK--ICGTEKNLLTQIFRFFTQADVE 69

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL--FNMYREV 152
           V +  +         PE    L   A  E +H   + +++ ++G+ E E   F  Y+++
Sbjct: 70  VHDCYMRHYAGVFKPPEVCMMLTAFANMETIHIAAYAHLLDTVGMPETEYLAFTKYKQM 128


>gi|190896442|gb|ACE96734.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896490|gb|ACE96758.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 213

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 6/106 (5%)

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           DL  W++   LT DE+  I   L FF +S+ +V  NI     + +   E R +   Q   
Sbjct: 1   DLGHWEN---LTPDEKHFISHVLAFFVASDGIVLENIAGRFMKEVQVSEARAFYGFQIAI 57

Query: 124 EAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYT 166
           E +HS  +  ++ +   D  E   LF+    VP +  KA WAL++ 
Sbjct: 58  ENIHSEMYSLLLETYIKDSTEKNRLFHAIETVPCVAKKAEWALRWI 103


>gi|157164305|ref|YP_001467763.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           concisus 13826]
 gi|112800348|gb|EAT97692.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           concisus 13826]
          Length = 340

 Score = 50.1 bits (118), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 3/122 (2%)

Query: 18  NVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           N+ D+R+ N     +      KY WA + +     N W P EV   DD+  +     LT+
Sbjct: 14  NLTDRRVFNGNPHGILNFTKAKYEWALKLWDLMEANTWFPKEVDTTDDVRDYAY--NLTE 71

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
            E+ M         S +S   NN+   I  +++ PE    L RQA+EEA HS ++  ++ 
Sbjct: 72  AEKRMYDLVWSQLISMDSFQTNNLADNINPYITAPEINAVLSRQAYEEANHSKSYAVMVE 131

Query: 137 SL 138
           ++
Sbjct: 132 AI 133


>gi|288800286|ref|ZP_06405744.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp.
           oral taxon 299 str. F0039]
 gi|288332499|gb|EFC70979.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp.
           oral taxon 299 str. F0039]
          Length = 347

 Score = 49.7 bits (117), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 5/118 (4%)

Query: 22  KRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           +RM+   + ++N    ++Y W  + Y  A NN W+P E+ +  D    K    L   ER 
Sbjct: 21  RRMIGGNTTNLNDFNNMRYQWVSDWYRQAMNNFWIPEEINLTQDT---KDYPKLDKAERT 77

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
              + L F    +SL + N+  ++  +++  E    L  QAF+E VHS ++ Y++ ++
Sbjct: 78  AYDKILSFLVFLDSLQSTNLP-SLTEYVTANEVNLCLHIQAFQECVHSQSYSYMLDTI 134


>gi|269864629|ref|XP_002651641.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220064151|gb|EED42415.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 277

 Score = 49.7 bits (117), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 3/101 (2%)

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           LT +E+  IK  L FFA+S+ +V  N+V      +   E + +   Q   E +HS  +  
Sbjct: 11  LTPNEQFFIKYVLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAIENIHSEMYSK 70

Query: 134 IITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           +I +L  D+ E   LFN    +PSI  KA WA ++  + +S
Sbjct: 71  LIETLIRDKEEQTYLFNAIENIPSIRKKALWAQKWIASDTS 111


>gi|149182583|ref|ZP_01861054.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           SG-1]
 gi|148849719|gb|EDL63898.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           SG-1]
          Length = 345

 Score = 49.7 bits (117), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/127 (22%), Positives = 65/127 (51%), Gaps = 6/127 (4%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +++ WA+ KY     N W P E+ M  D+   K    LT+ E+    + +G  A  +S +
Sbjct: 35  VRFSWAYPKYKRMLGNFWTPFEINMSKDI---KQFPNLTEQEQDTFLKVIGLLALLDS-I 90

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPS 154
             +    +  +L++      ++  A +E VH+H++ Y+++S+     + E+F+ +R  P+
Sbjct: 91  QTDYAGKVADYLTDSSLNALMIILAQQEVVHNHSYSYVLSSIVSKNKQDEVFDYWRTEPT 150

Query: 155 ITAKANW 161
           +  + ++
Sbjct: 151 LRKRNDF 157


>gi|160942848|ref|ZP_02090088.1| hypothetical protein FAEPRAM212_00325 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445900|gb|EDP22903.1| hypothetical protein FAEPRAM212_00325 [Faecalibacterium prausnitzii
           M21/2]
          Length = 347

 Score = 49.7 bits (117), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 5/131 (3%)

Query: 9   PIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           P+   E   +V  +RM    + ++N    +KY W  + Y  A NN W+P E+ +  D+  
Sbjct: 8   PLFNPEGDPDVRLRRMTGGNTTNLNDFNNMKYAWVSDWYRQAMNNFWIPEEINLSQDV-- 65

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
            K    L   ER    + L F    +S+   N+   I  +++  E    L  QAF+E VH
Sbjct: 66  -KDYPRLLSAERSAYDKILSFLVFLDSIQTANLP-NIGAYITANEVNLCLSIQAFQECVH 123

Query: 128 SHTFQYIITSL 138
           S ++ Y++ ++
Sbjct: 124 SQSYSYMLDTI 134


>gi|260589755|ref|ZP_05855668.1| ribonucleoside-diphosphate reductase, beta subunit [Blautia
           hansenii DSM 20583]
 gi|260539995|gb|EEX20564.1| ribonucleoside-diphosphate reductase, beta subunit [Blautia
           hansenii DSM 20583]
          Length = 359

 Score = 49.7 bits (117), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 5/123 (4%)

Query: 17  VNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
            +V  +RM+   + ++N    ++YGW    Y  A NN W+P E+ +  D    K    L 
Sbjct: 28  TDVRFRRMIGGNTTNLNDFNNMRYGWVKGWYRQAMNNFWIPEEINLSQDR---KDYGELL 84

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
             ER    + L F    +S+ + N+   I  +++  E    L  Q F+E VHS ++ Y++
Sbjct: 85  GKERQAYDKILSFLVFLDSIQSANLP-CIGEYITANEINLCLSIQTFQECVHSQSYSYML 143

Query: 136 TSL 138
            ++
Sbjct: 144 DTI 146


>gi|56418235|gb|AAV91049.1| ribonucleotide reductase beta subunit [Grouper iridovirus]
          Length = 384

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 3/119 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P KY WA +  +     HW+ TEV ++DD+  WKS   LT  E+  I   L  F   +  
Sbjct: 76  PFKYSWAEDVRVKHERIHWVETEVNLRDDVTDWKS-GALTQQEKEFISCVLRLFTQLDVE 134

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL--FNMYREV 152
           V    +  + +     E R  L   A  EA+H   +  +  +LG+ + E   F  Y+E+
Sbjct: 135 VGGLYLDFLTQVFKCNEIRNMLTSFACREAIHQKAYSLLNDTLGMPDCEYSAFVAYKEM 193


>gi|325478871|gb|EGC81981.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
           prevotii ACS-065-V-Col13]
          Length = 352

 Score = 49.3 bits (116), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 4/110 (3%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
           +++N    LKY W  + Y  A NN W+P E+ +  D+   K    L + E+    R L F
Sbjct: 34  TNLNDFNNLKYTWTSDWYRQAMNNFWIPEEINLNQDI---KDYRNLDEHEKRAFDRILSF 90

Query: 89  FASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
               +S+   N+   +  +++  E    L  Q ++E++HS ++ YI+ ++
Sbjct: 91  LTYLDSIQTANLP-NLQTYITANEINLCLSIQTYQESIHSQSYSYILDTI 139


>gi|255323570|ref|ZP_05364700.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           showae RM3277]
 gi|255299284|gb|EET78571.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           showae RM3277]
          Length = 340

 Score = 49.3 bits (116), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 3/122 (2%)

Query: 18  NVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           N+ D+R+ N     +      KY WA + +     N W P EV   DD+  +     LT 
Sbjct: 14  NLTDRRVFNGNPHGILNFTKAKYQWALKLWDLMEANTWFPKEVDTTDDVRDYAY--NLTQ 71

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
            E+ M         S +S   NN+   I  +++ PE    L RQA+EEA HS ++  ++ 
Sbjct: 72  AEKRMYDLVWSQLISMDSFQTNNLADNINPYITAPEINACLARQAYEEANHSKSYAVMVE 131

Query: 137 SL 138
           ++
Sbjct: 132 AI 133


>gi|51891459|ref|YP_074150.1| ribonucleoside-diphosphate reductase beta subunit [Symbiobacterium
           thermophilum IAM 14863]
 gi|51855148|dbj|BAD39306.1| ribonucleoside-diphosphate reductase beta subunit [Symbiobacterium
           thermophilum IAM 14863]
          Length = 346

 Score = 49.3 bits (116), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 6/125 (4%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
           +++ +L  +KY WA +       N W+P EVP+ DD    K    LT DE+    R L F
Sbjct: 30  TNIMELTNVKYEWAQKLSDIMLRNFWIPEEVPLLDDA---KQYLELTADEQWAYDRMLSF 86

Query: 89  FASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE--LF 146
               +S++  ++   I  +++ PE    L    F EA+HS ++ Y++ S+   E    ++
Sbjct: 87  VIFMDSILTVSMPNLI-NYVTAPEINMCLSIHNFHEALHSKSYGYVLESVVPAERRQYIY 145

Query: 147 NMYRE 151
           +++RE
Sbjct: 146 DLWRE 150


>gi|288554979|ref|YP_003426914.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus
           pseudofirmus OF4]
 gi|288546139|gb|ADC50022.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus
           pseudofirmus OF4]
          Length = 344

 Score = 49.3 bits (116), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 70/140 (50%), Gaps = 7/140 (5%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +++ WA+  Y +   N W P E+ M  D    K    LT+ E+   K+ +G  A  +S V
Sbjct: 34  VRFSWAYPLYKNMLANFWTPFEINMSHDT---KQFQNLTETEQEAFKKIIGLLAFLDS-V 89

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPS 154
             +  L +  +L++      +   +F+E VH+ ++ Y+++SL     + E+F+ ++  P 
Sbjct: 90  QTDYSLKVADYLTDSSLVALMSVLSFQEVVHNQSYSYVLSSLVPKATQDEIFDYWKNDPV 149

Query: 155 ITAKANWALQ-YTQTLSSPS 173
           +  +  + +  Y +  ++P+
Sbjct: 150 LKERNEFIVDGYEEFANNPT 169


>gi|51830370|gb|AAU09736.1| YGR180C [Saccharomyces cerevisiae]
          Length = 345

 Score = 48.9 bits (115), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 7/140 (5%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           M N+R  V  + P+KY   W  Y     + W   E+ +  D   ++    LTDD++  I 
Sbjct: 29  MENSRRFV--MFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQK---LTDDQKTYIG 83

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
             L    SS++LV   ++      L NPE + +   Q   E +HS  +  ++ +   D  
Sbjct: 84  NLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIHSEVYSMMVDAFFKDPK 143

Query: 144 E--LFNMYREVPSITAKANW 161
              LF     +P +  KA +
Sbjct: 144 NIPLFKEIANLPEVKHKAAF 163


>gi|89097912|ref|ZP_01170799.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           NRRL B-14911]
 gi|89087414|gb|EAR66528.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           NRRL B-14911]
          Length = 353

 Score = 48.9 bits (115), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/141 (22%), Positives = 71/141 (50%), Gaps = 9/141 (6%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +++ WA+ KY     N W P E+ M  D+   K    L+++E+    + +G  A  +S +
Sbjct: 42  VRFQWAFPKYKRMLANFWTPFEINMSQDI---KQFPDLSEEEKEAFLKIIGLLALLDS-I 97

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD---EGELFNMYREVP 153
             +    +  +L++      ++  A +E +H+H++ Y+++S+ +D   + E+F  +R  P
Sbjct: 98  QTDYAGKVADYLTDSSLSALMIILAQQEVIHNHSYSYVLSSI-VDKNKQDEVFEFWRTEP 156

Query: 154 SITAKANW-ALQYTQTLSSPS 173
           ++  +  + A  Y     SP+
Sbjct: 157 ALIKRNEFVASGYRNFAESPT 177


>gi|257067181|ref|YP_003153437.1| ribonucleotide-diphosphate reductase subunit beta [Anaerococcus
           prevotii DSM 20548]
 gi|256799061|gb|ACV29716.1| Ribonucleoside-diphosphate reductase [Anaerococcus prevotii DSM
           20548]
          Length = 352

 Score = 48.9 bits (115), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/123 (23%), Positives = 62/123 (50%), Gaps = 5/123 (4%)

Query: 17  VNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           +++  +R++   + ++N    LKY W  + Y  A NN W+P E+ +  D+  ++    L 
Sbjct: 21  IDLSKRRIIQGNTTNLNDFNNLKYTWTSDWYRQAMNNFWIPEEINLNQDIKDYRK---LD 77

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
             E+    R L F    +S+   N+   +  +++  E    L  Q ++E++HS ++ YI+
Sbjct: 78  KHEKKAFDRILSFLTYLDSIQTANLP-NLQTYITANEINLCLSIQTYQESIHSQSYSYIL 136

Query: 136 TSL 138
            ++
Sbjct: 137 DTI 139


>gi|157375444|ref|YP_001474044.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           sediminis HAW-EB3]
 gi|157317818|gb|ABV36916.1| Ribonucleoside-diphosphate reductase [Shewanella sediminis HAW-EB3]
          Length = 376

 Score = 48.9 bits (115), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 57/112 (50%), Gaps = 3/112 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P E+ +  D A W+    LT+ E+ +   NL +    +S+ A ++   +   +S PE 
Sbjct: 49  WRPEEIDISKDRADWQR---LTESEKHIFISNLKYQTLLDSMAARSVNAVLLPLVSLPEV 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQY 165
             ++   AF E +HS ++ +I+ +L  + GE+F+     P+I  +A    +Y
Sbjct: 106 ETWVETWAFSETIHSRSYTHILRNLFTEPGEVFDDIVVNPAILKRATSIAKY 157


>gi|282598964|ref|YP_003358881.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Deftia phage phiW-14]
 gi|257219034|gb|ACV50049.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Deftia phage phiW-14]
          Length = 346

 Score = 48.9 bits (115), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 4/120 (3%)

Query: 51  NNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSN 110
           + HW+  E  + DD+  W++++  +DDER  IK  L  F   + +VA+N          N
Sbjct: 34  DAHWVKQEAELGDDVNDWRNRS--SDDERSFIKEILTVFTQGDVVVADNYKSIFIPAFKN 91

Query: 111 PECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKAN-WALQYTQTL 169
            E   +L+  A  E +H   +     + GL +  +F  +RE   +  + +  A QY  ++
Sbjct: 92  NEVSNWLVGVAAREVIHQDAYAMANETFGLPD-SMFGRFREYQEMRERNDLMATQYDPSM 150


>gi|126658748|ref|ZP_01729893.1| hypothetical protein CY0110_32340 [Cyanothece sp. CCY0110]
 gi|126620010|gb|EAZ90734.1| hypothetical protein CY0110_32340 [Cyanothece sp. CCY0110]
          Length = 347

 Score = 48.9 bits (115), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 6/143 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNA-RSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           SPI     + N +++ +     ++V  L   +YGWA   Y +   + W+P    +  D  
Sbjct: 9   SPIFNPTGKDNKENRHLWGGDTTNVINLNETRYGWARSIYQTMRESFWVPQRTDLSQDKL 68

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            + +   L   ER  +K  L +    +S+   NI   + R+++ PE R  L  Q  +EA+
Sbjct: 69  DYAN---LIPGERRALKGILSYLNFLDSVQVANIP-ELSRYITAPEARMCLAEQTSQEAM 124

Query: 127 HSHTFQYIITSLGLDEGELFNMY 149
           H  T+QYI  S+ + E E   +Y
Sbjct: 125 HGETYQYITESI-IPENEQHEVY 146


>gi|154149104|ref|YP_001405803.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           hominis ATCC BAA-381]
 gi|153805113|gb|ABS52120.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           hominis ATCC BAA-381]
          Length = 340

 Score = 48.5 bits (114), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 2/111 (1%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY WA + +     N W P EV   DD+  +     LT  E+ M +       S +S   
Sbjct: 35  KYVWALKLWDIMEANTWFPREVDTTDDVRDYNF--NLTPAEKRMYELVWSQLISMDSFQT 92

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNM 148
           NN+   I  +++ PE    L RQA+EEA HS ++  ++ ++  +  +++ M
Sbjct: 93  NNLADNINPYITAPEINAILARQAYEEANHSKSYAVMVEAICQNTDQIYEM 143


>gi|268678691|ref|YP_003303122.1| ribonucleoside-diphosphate reductase [Sulfurospirillum deleyianum
           DSM 6946]
 gi|268616722|gb|ACZ11087.1| Ribonucleoside-diphosphate reductase [Sulfurospirillum deleyianum
           DSM 6946]
          Length = 340

 Score = 48.5 bits (114), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 2/101 (1%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY WA + +     N W P EV    D+  + +KN LTD E+ M         S +S   
Sbjct: 35  KYTWALKLWDMMEGNTWFPKEVDTTKDVIDY-NKN-LTDAEKRMYDLVWSQLISMDSFQT 92

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           NN+   I  +++ PE    L RQA+EEA HS ++  ++ ++
Sbjct: 93  NNLADNINPYITAPEINACLSRQAYEEANHSKSYAVMVEAM 133


>gi|332184137|gb|AEE26391.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Francisella cf. novicida 3523]
          Length = 410

 Score = 48.5 bits (114), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 4/134 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG-LTDDERLMIKRNLGFFASSES 94
           P  Y WA +  +     HW+  E+ + +D+  W  KNG +T  E+  I   L  F  S+ 
Sbjct: 102 PFNYPWAVDLTVKHEKAHWIEDEIDLSEDVTDW--KNGKITKVEKEYITNILRLFTQSDV 159

Query: 95  LVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPS 154
            V  N          N E R  L   A  E +H   +  +  +LGL + E ++ + E  +
Sbjct: 160 AVGQNYYDQFIPLFKNNEVRNMLGSFAAREGIHQRAYALLNDTLGLPDSE-YHAFLEYKA 218

Query: 155 ITAKANWALQYTQT 168
           +T K ++ +    T
Sbjct: 219 MTDKIDFMMDADPT 232


>gi|167627842|ref|YP_001678342.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167597843|gb|ABZ87841.1| Ribonucleoside-diphosphate reductase [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
          Length = 410

 Score = 48.5 bits (114), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 4/130 (3%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG-LTDDERLMIKRNLGFFASSES 94
           P  Y WA +  +     HW+  E+ + +D+  W  KNG +T  E+  I   L  F  S+ 
Sbjct: 102 PFSYPWAVDLTVKHEKAHWIEDEIDLSEDVTDW--KNGKITKVEKEYITNILRLFTQSDV 159

Query: 95  LVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPS 154
            V  N          N E R  L   A  E +H   +  +  +LGL + E ++ + E  +
Sbjct: 160 AVGQNYYDQFIPLFKNNEVRNMLGSFAAREGIHQRAYALLNDTLGLPDSE-YHAFLEYKA 218

Query: 155 ITAKANWALQ 164
           +T K ++ + 
Sbjct: 219 MTDKIDFMMD 228


>gi|241668401|ref|ZP_04755979.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876934|ref|ZP_05249644.1| glutaredoxin 3/ribonucleotide reductase beta subunit [Francisella
           philomiragia subsp. philomiragia ATCC 25015]
 gi|254842955|gb|EET21369.1| glutaredoxin 3/ribonucleotide reductase beta subunit [Francisella
           philomiragia subsp. philomiragia ATCC 25015]
          Length = 410

 Score = 48.5 bits (114), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 4/130 (3%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG-LTDDERLMIKRNLGFFASSES 94
           P  Y WA +  +     HW+  E+ + +D+  W  KNG +T  E+  I   L  F  S+ 
Sbjct: 102 PFSYPWAVDLTVKHEKAHWIEDEIDLSEDVTDW--KNGKITKVEKEYITNILRLFTQSDV 159

Query: 95  LVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPS 154
            V  N          N E R  L   A  E +H   +  +  +LGL + E ++ + E  +
Sbjct: 160 AVGQNYYDQFIPLFKNNEVRNMLGSFAAREGIHQRAYALLNDTLGLPDSE-YHAFLEYKA 218

Query: 155 ITAKANWALQ 164
           +T K ++ + 
Sbjct: 219 MTDKIDFMMD 228


>gi|57339646|gb|AAW49810.1| hypothetical protein FTT0532 [synthetic construct]
          Length = 445

 Score = 48.1 bits (113), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 4/134 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG-LTDDERLMIKRNLGFFASSES 94
           P  Y WA +  +     HW+  E+ + +D+  W  KNG +T  E+  I   L  F  S+ 
Sbjct: 128 PFNYPWAVDLTVKHEKAHWIEDEIDLSEDVTDW--KNGKITKVEKEYITNILRLFTQSDV 185

Query: 95  LVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPS 154
            V  N          N E R  L   A  E +H   +  +  +LGL + E ++ + E  +
Sbjct: 186 AVGQNYYDQFIPLFKNNEIRNMLGSFAAREGIHQRAYALLNDTLGLPDSE-YHAFLEYKA 244

Query: 155 ITAKANWALQYTQT 168
           +T K ++ +    T
Sbjct: 245 MTDKIDFMMDADPT 258


>gi|260912588|ref|ZP_05919119.1| ribonucleoside-diphosphate reductase [Prevotella sp. oral taxon 472
           str. F0295]
 gi|260633300|gb|EEX51459.1| ribonucleoside-diphosphate reductase [Prevotella sp. oral taxon 472
           str. F0295]
          Length = 348

 Score = 48.1 bits (113), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 5/118 (4%)

Query: 22  KRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           +RM+   + ++N    ++Y WA + Y  A NN W+P E+ +  D    K    L   ER 
Sbjct: 22  RRMIGGNTTNLNDFNNMRYTWASDWYRQAMNNFWIPEEINLTQDT---KDYPLLPPAERK 78

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
              + L F    +SL + N+  ++   ++  E    L  QAF+E VHS ++ Y++ ++
Sbjct: 79  AYDKILSFLVFLDSLQSANLP-SLTEFITANEVNLCLHIQAFQECVHSQSYSYMLDTI 135


>gi|254369307|ref|ZP_04985319.1| hypothetical protein FTAG_00272 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157122257|gb|EDO66397.1| hypothetical protein FTAG_00272 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 410

 Score = 48.1 bits (113), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 4/134 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG-LTDDERLMIKRNLGFFASSES 94
           P  Y WA +  +     HW+  E+ + +D+  W  KNG +T  E+  I   L  F  S+ 
Sbjct: 102 PFNYPWAVDLTVKHEKAHWIEDEIDLSEDVTDW--KNGKITKVEKEYITNILRLFTQSDV 159

Query: 95  LVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPS 154
            V  N          N E R  L   A  E +H   +  +  +LGL + E ++ + E  +
Sbjct: 160 AVGQNYYDQFIPLFKNNEIRNMLGSFAAREGIHQRAYALLNDTLGLPDSE-YHAFLEYKA 218

Query: 155 ITAKANWALQYTQT 168
           +T K ++ +    T
Sbjct: 219 MTDKIDFMMDADPT 232


>gi|56707665|ref|YP_169561.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110670136|ref|YP_666693.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. tularensis
           FSC198]
 gi|187931834|ref|YP_001891819.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|224456732|ref|ZP_03665205.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254370173|ref|ZP_04986179.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874478|ref|ZP_05247188.1| nrdB, biofunctional protein, glutaredoxin 3
           protein/ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|56604157|emb|CAG45165.1| Biofunctional protein, glutaredoxin 3
           protein/Ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. tularensis SCHU
           S4]
 gi|110320469|emb|CAL08548.1| Biofunctional protein, glutaredoxin 3
           protein/Ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151568417|gb|EDN34071.1| hypothetical protein FTBG_01287 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|187712743|gb|ACD31040.1| bifunctional protein: glutaredoxin 3/ribonucleotide reductase beta
           subunit [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|254840477|gb|EET18913.1| nrdB, biofunctional protein, glutaredoxin 3
           protein/ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282158827|gb|ADA78218.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 410

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 4/134 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG-LTDDERLMIKRNLGFFASSES 94
           P  Y WA +  +     HW+  E+ + +D+  W  KNG +T  E+  I   L  F  S+ 
Sbjct: 102 PFNYPWAVDLTVKHEKAHWIEDEIDLSEDVTDW--KNGKITKVEKEYITNILRLFTQSDV 159

Query: 95  LVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPS 154
            V  N          N E R  L   A  E +H   +  +  +LGL + E ++ + E  +
Sbjct: 160 AVGQNYYDQFIPLFKNNEIRNMLGSFAAREGIHQRAYALLNDTLGLPDSE-YHAFLEYKA 218

Query: 155 ITAKANWALQYTQT 168
           +T K ++ +    T
Sbjct: 219 MTDKIDFMMDADPT 232


>gi|134301991|ref|YP_001121960.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|134049768|gb|ABO46839.1| biofunctional glutaredoxin 3 protein/Ribonucleoside-diphosphate
           reductase beta subunit [Francisella tularensis subsp.
           tularensis WY96-3418]
          Length = 410

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 4/134 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG-LTDDERLMIKRNLGFFASSES 94
           P  Y WA +  +     HW+  E+ + +D+  W  KNG +T  E+  I   L  F  S+ 
Sbjct: 102 PFNYPWAVDLTVKHEKAHWIEDEIDLSEDVTDW--KNGKITKVEKEYITNILRLFTQSDV 159

Query: 95  LVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPS 154
            V  N          N E R  L   A  E +H   +  +  +LGL + E ++ + E  +
Sbjct: 160 AVGQNYYDQFIPLFKNNEIRNMLGSFAAREGIHQRAYALLNDTLGLPDSE-YHAFLEYKA 218

Query: 155 ITAKANWALQYTQT 168
           +T K ++ +    T
Sbjct: 219 MTDKIDFMMDADPT 232


>gi|89256330|ref|YP_513692.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. holarctica
           LVS]
 gi|115314778|ref|YP_763501.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156502403|ref|YP_001428469.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167010840|ref|ZP_02275771.1| ribonucleotide-diphosphate reductase beta subunit [Francisella
           tularensis subsp. holarctica FSC200]
 gi|254367665|ref|ZP_04983686.1| biofunctional protein: glutaredoxin 3
           protein-ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. holarctica 257]
 gi|290952877|ref|ZP_06557498.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295313922|ref|ZP_06804487.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. holarctica
           URFT1]
 gi|89144161|emb|CAJ79423.1| Biofunctional protein, glutaredoxin 3
           protein/Ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. holarctica LVS]
 gi|115129677|gb|ABI82864.1| ribonucleoside-diphosphate reductase [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134253476|gb|EBA52570.1| biofunctional protein: glutaredoxin 3
           protein-ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. holarctica 257]
 gi|156253006|gb|ABU61512.1| bifunctional glutaredoxin /ribonucleoside-diphosphate reductase
           beta subunit [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 410

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 4/134 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG-LTDDERLMIKRNLGFFASSES 94
           P  Y WA +  +     HW+  E+ + +D+  W  KNG +T  E+  I   L  F  S+ 
Sbjct: 102 PFNYPWAVDLTVKHEKAHWIEDEIDLSEDVTDW--KNGKITKVEKEYITNILRLFTQSDV 159

Query: 95  LVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPS 154
            V  N          N E R  L   A  E +H   +  +  +LGL + E ++ + E  +
Sbjct: 160 AVGQNYYDQFIPLFKNNEIRNMLGSFAAREGIHQRAYALLNDTLGLPDSE-YHAFLEYKA 218

Query: 155 ITAKANWALQYTQT 168
           +T K ++ +    T
Sbjct: 219 MTDKIDFMMDADPT 232


>gi|118497575|ref|YP_898625.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. novicida
           U112]
 gi|195536272|ref|ZP_03079279.1| ribonucleoside-diphosphate reductase, beta subunit domain
           [Francisella tularensis subsp. novicida FTE]
 gi|208779374|ref|ZP_03246720.1| ribonucleoside-diphosphate reductase, beta subunit domain
           [Francisella novicida FTG]
 gi|254372936|ref|ZP_04988425.1| hypothetical protein FTCG_00507 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|118423481|gb|ABK89871.1| bifunctional protein: glutaredoxin 3 /ribonucleotide reductase beta
           subunit [Francisella novicida U112]
 gi|151570663|gb|EDN36317.1| hypothetical protein FTCG_00507 [Francisella novicida GA99-3549]
 gi|194372749|gb|EDX27460.1| ribonucleoside-diphosphate reductase, beta subunit domain
           [Francisella tularensis subsp. novicida FTE]
 gi|208745174|gb|EDZ91472.1| ribonucleoside-diphosphate reductase, beta subunit domain
           [Francisella novicida FTG]
          Length = 410

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 4/134 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG-LTDDERLMIKRNLGFFASSES 94
           P  Y WA +  +     HW+  E+ + +D+  W  KNG +T  E+  I   L  F  S+ 
Sbjct: 102 PFNYPWAVDLTVKHEKAHWIEDEIDLSEDVTDW--KNGKITKVEKEYITNILRLFTQSDV 159

Query: 95  LVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPS 154
            V  N          N E R  L   A  E +H   +  +  +LGL + E ++ + E  +
Sbjct: 160 AVGQNYYDQFIPLFKNNEIRNMLGSFAAREGIHQRAYALLNDTLGLPDSE-YHAFLEYKA 218

Query: 155 ITAKANWALQYTQT 168
           +T K ++ +    T
Sbjct: 219 MTDKIDFMMDADPT 232


>gi|254374389|ref|ZP_04989871.1| glutaredoxin [Francisella novicida GA99-3548]
 gi|151572109|gb|EDN37763.1| glutaredoxin [Francisella novicida GA99-3548]
          Length = 410

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 4/134 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG-LTDDERLMIKRNLGFFASSES 94
           P  Y WA +  +     HW+  E+ + +D+  W  KNG +T  E+  I   L  F  S+ 
Sbjct: 102 PFNYPWAVDLTVKHEKAHWIEDEIDLSEDVTDW--KNGKITKVEKEYITNILRLFTQSDV 159

Query: 95  LVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPS 154
            V  N          N E R  L   A  E +H   +  +  +LGL + E ++ + E  +
Sbjct: 160 AVGQNYYDQFIPLFKNNEIRNMLGSFAAREGIHQRAYALLNDTLGLPDSE-YHAFLEYKA 218

Query: 155 ITAKANWALQYTQT 168
           +T K ++ +    T
Sbjct: 219 MTDKIDFMMDADPT 232


>gi|313887688|ref|ZP_07821370.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus
           harei ACS-146-V-Sch2b]
 gi|312846297|gb|EFR33676.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus
           harei ACS-146-V-Sch2b]
          Length = 346

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 60/123 (48%), Gaps = 5/123 (4%)

Query: 17  VNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           +    +R++N  + ++N    LKY W  + Y  A NN W+P E+ +  D+  ++    L 
Sbjct: 15  IETSKRRVINGNTTNLNDFNNLKYSWTSDWYRQAMNNFWIPEEINLSQDVKDYRE---LD 71

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
             E+    + L F    +SL    I   +  +++  E    L  Q ++E++HS ++ YI+
Sbjct: 72  KAEKTAYDKILSFLIYLDSLQTAQIP-KLQSYVTANEINLCLSIQGYQESIHSQSYSYIL 130

Query: 136 TSL 138
            ++
Sbjct: 131 DTI 133


>gi|288928561|ref|ZP_06422408.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp.
           oral taxon 317 str. F0108]
 gi|288331395|gb|EFC69979.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp.
           oral taxon 317 str. F0108]
          Length = 348

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 5/118 (4%)

Query: 22  KRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           +RM+   + ++N    ++Y WA + Y  A NN W+P E+ +  D    K    L   ER 
Sbjct: 22  RRMIGGNTTNLNDFNNMRYTWASDWYRQAMNNFWIPEEINLTQDT---KDYPLLPPAERK 78

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
              + L F    +SL + N+  ++   ++  E    L  QAF+E VHS ++ Y++ ++
Sbjct: 79  AYDKILSFLVFLDSLQSANLP-SLTEFITANEVNLCLHIQAFQECVHSQSYSYMLDTI 135


>gi|291092706|gb|ADD74390.1| ribonucleotide reductase small subunit [uncultured virus]
          Length = 181

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 3/90 (3%)

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
             K  L FFA S+ +V  N+V   Y  +   E R +   QA  E +H+  +  +I +L  
Sbjct: 2   FFKCILAFFAPSDGIVGENLVTRFYEMVVYTEARYFYAFQAAMENIHAEVYSQLIKTLIP 61

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQ 167
           +E E   +F+ +   P IT K  WA Q+ +
Sbjct: 62  NEDEQRSIFSSFMTTPGITEKTRWAKQWLE 91


>gi|227485717|ref|ZP_03916033.1| ribonucleoside-diphosphate reductase [Anaerococcus lactolyticus
           ATCC 51172]
 gi|227236272|gb|EEI86287.1| ribonucleoside-diphosphate reductase [Anaerococcus lactolyticus
           ATCC 51172]
          Length = 352

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 4/110 (3%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
           +++N    LKY W  + Y  A NN W+P E+ +  D+   K    L   E+    R L F
Sbjct: 34  TNLNDFNNLKYTWTSDWYRQAMNNFWIPEEINLNQDI---KDYRKLDQHEKRAFDRILSF 90

Query: 89  FASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
               +S+   N+   +  +++  E    L  Q ++E++HS ++ YI+ ++
Sbjct: 91  LTYLDSIQTANLP-NLQTYVTANEINLCLSIQTYQESIHSQSYSYILDTI 139


>gi|239826135|ref|YP_002948759.1| ribonucleoside-diphosphate reductase [Geobacillus sp. WCH70]
 gi|239806428|gb|ACS23493.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. WCH70]
          Length = 346

 Score = 48.1 bits (113), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 66/134 (49%), Gaps = 7/134 (5%)

Query: 23  RMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           R++N +S +V     + Y WA+ KY     N W P E+ M  D+   K    LT+ E+  
Sbjct: 21  RIINGKSSNVLNWDDIAYPWAYAKYKRMLANFWTPFEINMSQDV---KQFPNLTEREQDA 77

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--G 139
             + +G  A  +S +  +    +  ++++      ++  A +E +H+H++ Y+++SL   
Sbjct: 78  FLKIIGLLALLDS-IQTDYAGRVADYITDSSINALMIMLAQQEVIHNHSYSYVLSSLVPK 136

Query: 140 LDEGELFNMYREVP 153
             + E+F  +R  P
Sbjct: 137 SKQDEVFEFWRNEP 150


>gi|146189565|emb|CAM91784.1| hypothetical protein [Platynereis dumerilii]
          Length = 87

 Score = 48.1 bits (113), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 3/86 (3%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           W+ Y  A  + W   EV +  D+A W+S   L  DER  I   L FFA+S+ +V  N+V 
Sbjct: 4   WQFYKRAEASFWTAEEVDLSKDVAQWES---LKKDERHFISHVLAFFAASDGIVNENLVE 60

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHS 128
              + +   E R +   Q   E +HS
Sbjct: 61  RFSKEVQVTEARFFYGFQIAIENIHS 86


>gi|56692684|ref|YP_164142.1| ribonucleoside-diphosphate reductase beta subunit [Singapore
           grouper iridovirus]
 gi|42517396|gb|AAS18062.1| ribonucleoside-diphosphate reductase beta subunit [Singapore
           grouper iridovirus]
          Length = 384

 Score = 47.8 bits (112), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 3/119 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P KY WA +  +     HW+ TEV ++DD+  WKS   L+  E+  I   L  F   +  
Sbjct: 76  PFKYSWAEDIRVKHERIHWVETEVNLRDDVTDWKS-GALSQQEKEFISCVLRLFTQLDVE 134

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL--FNMYREV 152
           V    +  + +     E R  L   A  EA+H   +  +  +LG+ + E   F  Y+E+
Sbjct: 135 VGGLYLDFLTQVFKCNEIRNMLTSFACREAIHQKAYSLLNDTLGMPDCEYSAFVAYKEM 193


>gi|317130866|ref|YP_004097148.1| ribonucleotide reductase [Bacillus cellulosilyticus DSM 2522]
 gi|315475814|gb|ADU32417.1| ribonucleotide reductase [Bacillus cellulosilyticus DSM 2522]
          Length = 345

 Score = 47.4 bits (111), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 77/155 (49%), Gaps = 8/155 (5%)

Query: 23  RMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           R++N  S +V     +++ WA+  Y +   N W P E+ M +D+   K  + L   ER  
Sbjct: 20  RIINGESSNVLNWDDVRFKWAYPLYKNMLANFWTPFEINMGNDV---KQYDKLEPKEREA 76

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL- 140
             + +G  A  +S +  +  + + R+L++      +   +F+E VH+ ++ Y+++SL   
Sbjct: 77  FDKIIGLLAFLDS-IQTDYSMHVARYLTDSSLSALMTVLSFQEVVHNQSYSYVLSSLTTK 135

Query: 141 -DEGELFNMYREVPSITAKANW-ALQYTQTLSSPS 173
             + E+F  ++    +  + ++ A  Y   +S+P+
Sbjct: 136 AKQDEIFEYWKHDKVLRERNDFIAEGYEAFVSNPT 170


>gi|109287926|ref|YP_654620.1| hypothetical protein MIV048L [Invertebrate iridescent virus 3]
 gi|123878658|sp|Q197B2|RIR2_IIV3 RecName: Full=Probable ribonucleoside-diphosphate reductase small
           subunit 048L; AltName: Full=Ribonucleotide reductase
           small subunit
 gi|106073549|gb|ABF82078.1| hypothetical protein MIV048L [Aedes taeniorhynchus iridescent
           virus]
          Length = 376

 Score = 47.4 bits (111), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 3/114 (2%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
           +D     P +Y   ++K+ +  + HW   E+ MQDD+  W   N L++ E+  + + L F
Sbjct: 48  ADRTTFKPFEYPGCYDKWDTHEHAHWSFKELNMQDDVHDW--HNRLSEAEKTFLVQILRF 105

Query: 89  FASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE 142
           F   +  VA   V  + +    PE R  L      EA+H  ++ ++I++L L +
Sbjct: 106 FTQGDVDVAVGYVQYL-QLFQQPEVRMMLFSFGAREAMHIASYSHLISTLNLPD 158


>gi|238594383|ref|XP_002393469.1| hypothetical protein MPER_06792 [Moniliophthora perniciosa FA553]
 gi|215460986|gb|EEB94399.1| hypothetical protein MPER_06792 [Moniliophthora perniciosa FA553]
          Length = 184

 Score = 47.4 bits (111), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 2/81 (2%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   W+ Y  A  + W   E+ +  DL  W   N + D+ER  I   L FFA+S+
Sbjct: 99  LFPIQYPEIWQMYKKAEASFWTAEEMDLSKDLHDWN--NRMNDNERHFISHVLAFFAASD 156

Query: 94  SLVANNIVLAIYRHLSNPECR 114
            +V  N+V      +   E R
Sbjct: 157 GIVNENLVERFSNEVQAAEAR 177


>gi|118474076|ref|YP_891239.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           fetus subsp. fetus 82-40]
 gi|118413302|gb|ABK81722.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           fetus subsp. fetus 82-40]
          Length = 340

 Score = 47.4 bits (111), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 2/101 (1%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY WA + +     N W P EV   DD+  +     LT  E+ M         S +S   
Sbjct: 35  KYTWALKLWDLMEANTWFPKEVDTTDDVRDYAC--NLTTAEKRMYDLVWSQLISMDSFQT 92

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           NN+   I  +++ PE    L RQA+EEA HS ++  ++ ++
Sbjct: 93  NNLADNINPYITAPEINAILARQAYEEANHSKSYAVMVEAI 133


>gi|295401051|ref|ZP_06811025.1| Ribonucleoside-diphosphate reductase [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|312112173|ref|YP_003990489.1| ribonucleotide reductase [Geobacillus sp. Y4.1MC1]
 gi|294976844|gb|EFG52448.1| Ribonucleoside-diphosphate reductase [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|311217274|gb|ADP75878.1| ribonucleotide reductase [Geobacillus sp. Y4.1MC1]
          Length = 346

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 72/148 (48%), Gaps = 13/148 (8%)

Query: 15  KRVNVDDK------RMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           KRV +D +      R++N +S +V     + Y WA+ KY     N W P E+ M  D+  
Sbjct: 7   KRVIMDPEAPNRSTRIINGKSSNVLNWDDIAYPWAYAKYKRMLANFWTPFEINMSQDV-- 64

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
            K    LT+ E+    + +G  A  +S +  +    +  ++++      ++  A +E +H
Sbjct: 65  -KQFPLLTEREQDAFLKIIGLLALLDS-IQTDYAGRVADYITDSSINALMIMLAQQEVIH 122

Query: 128 SHTFQYIITSLGL--DEGELFNMYREVP 153
           +H++ Y+++SL     + E+F  +R  P
Sbjct: 123 NHSYSYVLSSLVTKSKQDEVFEFWRNEP 150


>gi|257458932|ref|ZP_05624052.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           gracilis RM3268]
 gi|257443636|gb|EEV18759.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           gracilis RM3268]
          Length = 340

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 2/101 (1%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY WA + +     N W P EV   DD+  +     LT  E+ M         S +S   
Sbjct: 35  KYQWALKLWDLMEANTWFPKEVDTTDDVRDYNF--NLTSAEKRMYDLVWSQLISMDSFQT 92

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           NN+   I  +++ PE    L RQA+EEA HS ++  ++ ++
Sbjct: 93  NNLADNINPYITAPEINAVLARQAYEEANHSKSYAVMVEAI 133


>gi|227501022|ref|ZP_03931071.1| ribonucleoside-diphosphate reductase [Anaerococcus tetradius ATCC
           35098]
 gi|227216795|gb|EEI82193.1| ribonucleoside-diphosphate reductase [Anaerococcus tetradius ATCC
           35098]
          Length = 352

 Score = 47.0 bits (110), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 4/110 (3%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
           +++N    LKY W  + Y  A NN W+P E+ +  D+  ++    L   E+    R L F
Sbjct: 34  TNLNDFNNLKYTWTSDWYRQAMNNFWIPEEINLNQDIKDYRK---LDQYEKKAYDRILSF 90

Query: 89  FASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
               +S+   N+   +  +++  E    L  Q ++E++HS ++ YI+ ++
Sbjct: 91  LTYLDSIQTANLP-NLQTYITANEINLCLSIQTYQESIHSQSYSYILDTI 139


>gi|223039245|ref|ZP_03609535.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           rectus RM3267]
 gi|222879606|gb|EEF14697.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           rectus RM3267]
          Length = 340

 Score = 46.6 bits (109), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 3/122 (2%)

Query: 18  NVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           N+ D+R+ N     +      KY WA + +     N W P EV    D+  +     LT 
Sbjct: 14  NLTDRRVFNGNPHGILNFTKAKYQWALKLWDLMEANTWFPKEVDTSGDVRDYAY--SLTQ 71

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
            E+ M         S +S   NN+   I  +++ PE    L RQA+EEA HS ++  ++ 
Sbjct: 72  AEKRMYDLVWSQLISMDSFQTNNLADNINPYITAPEINACLARQAYEEANHSKSYAVMVE 131

Query: 137 SL 138
           ++
Sbjct: 132 AI 133


>gi|13358428|ref|NP_078636.1| Ribonucleotide reductase small subunit [Lymphocystis disease virus
           1]
          Length = 378

 Score = 46.6 bits (109), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 58/130 (44%), Gaps = 9/130 (6%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA E      N HW   E+ + DD++ WK+   LT  E+  I + L  F   +  
Sbjct: 74  PFHYSWAVEIRALHENIHWTEKELSLADDVSDWKT-GKLTLFEKDFIIQILRLFTQLDVS 132

Query: 96  VA---NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL--FNMYR 150
           V    +NI + I++   N E R  L   A  E  H   +  +  +LGL E E   F  Y+
Sbjct: 133 VGHIYHNIFIPIFK---NNELRNMLCSFACREGTHQQAYALLNDTLGLPETEYSTFLNYK 189

Query: 151 EVPSITAKAN 160
           E+ + T   N
Sbjct: 190 EMTNKTIYMN 199


>gi|6321619|ref|NP_011696.1| Rnr4p [Saccharomyces cerevisiae S288c]
 gi|1710402|sp|P49723|RIR4_YEAST RecName: Full=Ribonucleoside-diphosphate reductase small chain 2;
           AltName: Full=Ribonucleotide reductase R2 subunit 2;
           AltName: Full=Ribonucleotide reductase small subunit 2
 gi|15826570|pdb|1JK0|B Chain B, Ribonucleotide Reductase Y2y4 Heterodimer
 gi|52695527|pdb|1SMS|A Chain A, Structure Of The Ribonucleotide Reductase Rnr4 Homodimer
           From Saccharomyces Cerevisiae
 gi|52695528|pdb|1SMS|B Chain B, Structure Of The Ribonucleotide Reductase Rnr4 Homodimer
           From Saccharomyces Cerevisiae
 gi|915546|gb|AAB72236.1| Rnr4p [Saccharomyces cerevisiae]
 gi|1323319|emb|CAA97206.1| RNR4 [Saccharomyces cerevisiae]
 gi|285812375|tpg|DAA08275.1| TPA: Rnr4p [Saccharomyces cerevisiae S288c]
 gi|323304781|gb|EGA58540.1| Rnr4p [Saccharomyces cerevisiae FostersB]
 gi|323308943|gb|EGA62174.1| Rnr4p [Saccharomyces cerevisiae FostersO]
          Length = 345

 Score = 46.6 bits (109), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 7/140 (5%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           M N+R  V  + P+KY   W  Y     + W   E+ +  D   ++    LTDD++  I 
Sbjct: 29  MENSRRFV--MFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQK---LTDDQKTYIG 83

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
             L    SS++LV   ++      L NPE + +   Q   E ++S  +  ++ +   D  
Sbjct: 84  NLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMVDAFFKDPK 143

Query: 144 E--LFNMYREVPSITAKANW 161
              LF     +P +  KA +
Sbjct: 144 NIPLFKEIANLPEVKHKAAF 163


>gi|332180128|gb|AEE15816.1| ribonucleotide reductase [Treponema brennaborense DSM 12168]
          Length = 346

 Score = 46.6 bits (109), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 4/110 (3%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
           +++N    +KY W  + Y  A NN W+P E+ +  D    K    L + ER    + L F
Sbjct: 28  TNLNDFNNMKYQWVSDWYRQAMNNFWIPEEINLSQDT---KDYPHLDEAERTAYDKILSF 84

Query: 89  FASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
               +S+   N+   +  +++  E    L  Q F+E VHS ++ Y++ ++
Sbjct: 85  LIFLDSIQTANLP-NVGEYITANEVNLCLSIQTFQECVHSQSYSYMLDTI 133


>gi|212638239|ref|YP_002314759.1| ribonucleotide-diphosphate reductase subunit beta [Anoxybacillus
           flavithermus WK1]
 gi|212559719|gb|ACJ32774.1| Ribonucleotide reductase, beta subunit [Anoxybacillus flavithermus
           WK1]
          Length = 345

 Score = 46.6 bits (109), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 6/121 (4%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +KY   ++ Y     N W P E+ M DD+  W   + L++ ER      +G  +  +S V
Sbjct: 34  IKYSHFYDIYKMLLGNFWTPFEINMSDDIKQW---HALSERERDAFLHIIGLLSILDS-V 89

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYREVPS 154
             N + A+  ++++P  +        +E VH+ ++ Y++ S+    ++   F M R  P 
Sbjct: 90  QPNFIGAMKEYITDPSVKAIFSIIEQQEVVHNQSYSYVLASIEKLSEQHRAFEMARTNPH 149

Query: 155 I 155
           I
Sbjct: 150 I 150


>gi|294501621|ref|YP_003565321.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus
           megaterium QM B1551]
 gi|295706969|ref|YP_003600044.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus
           megaterium DSM 319]
 gi|294351558|gb|ADE71887.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           megaterium QM B1551]
 gi|294804628|gb|ADF41694.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           megaterium DSM 319]
          Length = 347

 Score = 46.6 bits (109), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 53/102 (51%), Gaps = 4/102 (3%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +++ WA+ KY     N W P E+ M  D+   K    LT DE+    + +G  A  +S +
Sbjct: 35  VRFSWAFPKYKRMLANFWTPFEINMGQDI---KQFPQLTADEQESFLKIIGLLALLDS-I 90

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            ++    +  ++++      ++  A +E VH+H++ Y+++SL
Sbjct: 91  QSDYASKVADYVTDSSINALMIILAQQEVVHNHSYSYVLSSL 132


>gi|197322443|ref|YP_002154716.1| putative ribonucleotide reductase small subunit [Feldmannia species
           virus]
 gi|197130510|gb|ACH46846.1| putative ribonucleotide reductase small subunit [Feldmannia species
           virus]
          Length = 342

 Score = 46.2 bits (108), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 6/134 (4%)

Query: 32  NQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFAS 91
           NQ    +Y   +  Y       W   E+ + +D+  W      + DE+  I   L FFAS
Sbjct: 33  NQKSEFEYADVYALYKKEIACFWTVEEMDLSEDVECWDKS---SSDEQHFIIHILAFFAS 89

Query: 92  SESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL---GLDEGELFNM 148
            + +V  N+ +     +  P+ R +   Q   E++H   +  +I +       + ++   
Sbjct: 90  LDQIVMENVSVNFGDEIVIPQVRSHFAIQNAIESIHGEAYSILIQTYVKNSQQQSKILRS 149

Query: 149 YREVPSITAKANWA 162
            +E+P I  KA W 
Sbjct: 150 VQEMPIIRKKAQWV 163


>gi|295398337|ref|ZP_06808379.1| ribonucleotide-diphosphate reductase subunit beta [Aerococcus
           viridans ATCC 11563]
 gi|294973476|gb|EFG49261.1| ribonucleotide-diphosphate reductase subunit beta [Aerococcus
           viridans ATCC 11563]
          Length = 317

 Score = 45.8 bits (107), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 8/121 (6%)

Query: 41  WAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNI 100
           + W+K   A    W+ T VP+ +DL  WK    L+  E+ ++K+ +G  A  ++L +   
Sbjct: 18  FVWDK---ATAQFWLDTRVPVSNDLLEWKK---LSTMEKEIVKKAVGGLALLDTLQSEEG 71

Query: 101 VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYREVPSITAK 158
           + A+ +H    + R  L    F E++H+ T+  I+ SL    D  E+++     P +  K
Sbjct: 72  LYALKKHARTQKERAVLSNFMFMESIHAKTYGTILISLNTFKDIEEIYDWMNNDPMMQFK 131

Query: 159 A 159
           A
Sbjct: 132 A 132


>gi|325677552|ref|ZP_08157215.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus equi
           ATCC 33707]
 gi|325551623|gb|EGD21322.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus equi
           ATCC 33707]
          Length = 322

 Score = 45.8 bits (107), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 3/88 (3%)

Query: 51  NNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSN 110
            N W+P ++P+ +DLA W +   LTD ER M  R        ++  A    +A+      
Sbjct: 31  GNFWLPEKIPLSNDLASWAT---LTDTEREMTIRVFTGLTLLDTAQATVGAVAMIADAVT 87

Query: 111 PECRQYLLRQAFEEAVHSHTFQYIITSL 138
           P     L   AF E+VH+ ++  I ++L
Sbjct: 88  PHEEAVLTNMAFMESVHAKSYSSIFSTL 115


>gi|284929768|ref|YP_003422290.1| ribonucleotide reductase, subunit beta [cyanobacterium UCYN-A]
 gi|284810212|gb|ADB95909.1| ribonucleotide reductase, beta subunit [cyanobacterium UCYN-A]
          Length = 354

 Score = 45.8 bits (107), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 12/114 (10%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
           +++ QL  ++Y WA   Y     N W+P ++ +  D+  +   + LT+DER      L +
Sbjct: 36  TNLMQLNDVRYSWAVGLYQQMRENFWIPQKLDITQDVTDY---SNLTEDERYAYDGILSY 92

Query: 89  FASSESLVANNIVLAIYRHLSN----PECRQYLLRQAFEEAVHSHTFQYIITSL 138
               +S+   NI      HL N    PE    +  Q  +E +H+ ++QYII ++
Sbjct: 93  LTFLDSIQTCNI-----PHLKNSITAPEVSLCMAEQISQEGMHNQSYQYIIETI 141


>gi|304439119|ref|ZP_07399038.1| ribonucleotide-diphosphate reductase beta subunit [Peptoniphilus
           duerdenii ATCC BAA-1640]
 gi|304372478|gb|EFM26065.1| ribonucleotide-diphosphate reductase beta subunit [Peptoniphilus
           duerdenii ATCC BAA-1640]
          Length = 347

 Score = 45.8 bits (107), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/123 (22%), Positives = 63/123 (51%), Gaps = 5/123 (4%)

Query: 17  VNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           +++  + ++N  + ++N    +KY W  + Y  A NN W+P E+ +  D+  +K    L 
Sbjct: 16  IDLQKRTIINGNTTNLNDFNNIKYKWTSDWYRQAMNNFWIPEEINLSQDVLDYKI---LD 72

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           + E+    + L F    +S+    +   +  +++  E    L  Q+F+E++HS ++ YI+
Sbjct: 73  EAEKRAFDKILSFLIYLDSIQTAQLP-NLQAYITANEINLCLSIQSFQESIHSQSYSYIL 131

Query: 136 TSL 138
            ++
Sbjct: 132 DTI 134


>gi|298256097|gb|ADI71327.1| ribonucleoside diphosphate reductase beta subunit-like protein
           [European catfish virus]
 gi|298256101|gb|ADI71329.1| ribonucleoside diphosphate reductase beta subunit-like protein
           [European sheatfish virus]
          Length = 202

 Score = 45.8 bits (107), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 2/126 (1%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA +        HWM TE+ ++DD+  WKS   +T  E+  +   L  F   +  
Sbjct: 32  PFRYAWAEDIRTKHEKVHWMETEINLRDDVTDWKS-GVMTPGEKAFVSCVLRLFTQLDVE 90

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V    +  + +     E R  L   A  EA+H   +  +  +LG+ + E +  + +   +
Sbjct: 91  VGALYLDHLTQVFRCNEIRNMLTSFACREAIHQKAYSLLNDTLGMPDCE-YQAFADYEEM 149

Query: 156 TAKANW 161
           T K ++
Sbjct: 150 TDKLDF 155


>gi|312137650|ref|YP_004004986.1| ribonucleoside-diphosphate reductase beta subunit nrdf [Rhodococcus
           equi 103S]
 gi|311886989|emb|CBH46298.1| ribonucleoside-diphosphate reductase beta subunit NrdF [Rhodococcus
           equi 103S]
          Length = 322

 Score = 45.8 bits (107), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 3/88 (3%)

Query: 51  NNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSN 110
            N W+P ++P+ +DLA W +   LTD ER M  R        ++  A    +A+      
Sbjct: 31  GNFWLPEKIPLSNDLASWAT---LTDTEREMTIRVFTGLTLLDTAQATVGAVAMIADAVT 87

Query: 111 PECRQYLLRQAFEEAVHSHTFQYIITSL 138
           P     L   AF E+VH+ ++  I ++L
Sbjct: 88  PHEEAVLTNMAFMESVHAKSYSSIFSTL 115


>gi|319655055|ref|ZP_08009124.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           2_A_57_CT2]
 gi|317393250|gb|EFV74019.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           2_A_57_CT2]
          Length = 345

 Score = 45.8 bits (107), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/140 (21%), Positives = 65/140 (46%), Gaps = 7/140 (5%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +++ WA+ KY     N W P E+ M  D+   K    L   E+    + +G  A  +S +
Sbjct: 35  VRFSWAYPKYKKMLANFWTPFEINMSQDI---KQFPELRKSEQEAFLKIIGLLALLDS-I 90

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPS 154
             +    +  ++++      ++  A +E +H+H++ Y+++SL     + E+F  +R  P 
Sbjct: 91  QTDYAGKVADYITDSSISALMIILAQQEVIHNHSYSYVLSSLVPKQKQDEVFEFWRTEPI 150

Query: 155 ITAKANWALQ-YTQTLSSPS 173
           +  +  + +  Y     +PS
Sbjct: 151 LAERNEFVVNGYKDFAENPS 170


>gi|283955349|ref|ZP_06372848.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 414]
 gi|283793109|gb|EFC31879.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 414]
          Length = 340

 Score = 45.8 bits (107), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 2/124 (1%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY WA + +     N W P EV    D   ++    LT  E+ M         S +S  +
Sbjct: 35  KYTWALKLWDLMEANTWFPKEVDTTKDALDYRC--NLTAGEKRMYDLVWSQLISMDSFQS 92

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
           NN+   I  +++ PE    L RQA+EEA HS ++  ++ ++  +   ++ M +   ++  
Sbjct: 93  NNLADNINPYITAPEINAVLARQAYEEANHSKSYAVMVEAICDNTDLIYEMEKHDETLRE 152

Query: 158 KANW 161
           K ++
Sbjct: 153 KNDF 156


>gi|289705575|ref|ZP_06501967.1| ribonucleoside-diphosphate reductase, beta subunit [Micrococcus
           luteus SK58]
 gi|289557804|gb|EFD51103.1| ribonucleoside-diphosphate reductase, beta subunit [Micrococcus
           luteus SK58]
          Length = 323

 Score = 45.4 bits (106), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 9/119 (7%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
            NN W+P +VP+ +D+  W     LTD+ERL+  R        +++      +++     
Sbjct: 31  VNNFWLPEKVPLSNDVQSWSH---LTDEERLLSMRVFTGLTLLDTIQGTVGAVSLIPDAM 87

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLG----LDEGELFNMYREVPSITAKANWALQ 164
            P     L   AF E+VH+ ++  I ++L     +DE   F   RE  ++ AKA   ++
Sbjct: 88  TPHEEAVLTNIAFMESVHAKSYSSIFSTLASTPEIDEA--FRWSRENRNLQAKAGLIVE 144


>gi|239917558|ref|YP_002957116.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Micrococcus luteus NCTC 2665]
 gi|281413955|ref|ZP_06245697.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Micrococcus luteus NCTC 2665]
 gi|239838765|gb|ACS30562.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Micrococcus luteus NCTC 2665]
          Length = 323

 Score = 45.4 bits (106), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 9/114 (7%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
            NN W+P +VP+ +D+  W   + LTD+ERL+  R        +++      +++     
Sbjct: 31  VNNFWLPEKVPLSNDVQSW---SHLTDEERLLSMRVFTGLTLLDTIQGTVGAVSLIPDAM 87

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLG----LDEGELFNMYREVPSITAKA 159
            P     L   AF E+VH+ ++  I ++L     +DE   F   RE  ++ AKA
Sbjct: 88  TPHEEAVLTNIAFMESVHAKSYSSIFSTLASTPEIDEA--FRWSRENRNLQAKA 139


>gi|119485472|ref|ZP_01619800.1| hypothetical protein L8106_10031 [Lyngbya sp. PCC 8106]
 gi|119457228|gb|EAW38354.1| hypothetical protein L8106_10031 [Lyngbya sp. PCC 8106]
          Length = 359

 Score = 45.4 bits (106), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 65/133 (48%), Gaps = 5/133 (3%)

Query: 7   LSPIQAGEKRVNVDDKRM-LNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           ++PI   E   +V+++ +     +++ QL  ++Y WA   Y     N W+P ++ +  D+
Sbjct: 18  INPIFNPEGNDHVENRSIWFGDTTNLMQLNDVRYPWAVGLYKQMRENFWVPEKLDITQDV 77

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             +     LT DER      L +    +S+   NI   +   ++ PE    +  Q  +EA
Sbjct: 78  VDY---GNLTTDERRAFDGILSYLTFLDSIQTCNIP-HLKSSITAPEISLCMAEQVSQEA 133

Query: 126 VHSHTFQYIITSL 138
           +H+ ++QY+I ++
Sbjct: 134 MHNQSYQYMIETI 146


>gi|57168357|ref|ZP_00367491.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           coli RM2228]
 gi|305432773|ref|ZP_07401932.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           coli JV20]
 gi|57020165|gb|EAL56839.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           coli RM2228]
 gi|304444170|gb|EFM36824.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           coli JV20]
          Length = 340

 Score = 45.4 bits (106), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 2/124 (1%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY WA + +     N W P EV    D   ++    LT  E+ M         S +S   
Sbjct: 35  KYTWALKLWDLMEANTWFPKEVDTTKDALDYRC--NLTAGEKRMYDLVWSQLISMDSFQT 92

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
           NN+   I  +++ PE    L RQA+EEA HS ++  ++ ++  +   ++ M +   ++  
Sbjct: 93  NNLADNINPYITAPEINAVLARQAYEEANHSKSYAVMVEAICDNTDLIYEMEKHDETLRE 152

Query: 158 KANW 161
           K ++
Sbjct: 153 KNDF 156


>gi|315930891|gb|EFV09876.1| ribonucleotide reductase, small chain family protein [Campylobacter
           jejuni subsp. jejuni 305]
          Length = 305

 Score = 45.4 bits (106), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 2/124 (1%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY WA + +     N W P EV    D   ++    LT  E+ M         S +S   
Sbjct: 35  KYTWALKLWDLMEANTWFPKEVDTTKDALDYRC--NLTAGEKRMYDLVWSQLISMDSFQT 92

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
           NN+   I  +++ PE    L RQA+EEA HS ++  ++ ++  +   ++ M +   ++  
Sbjct: 93  NNLADNINPYITAPEINAVLARQAYEEANHSKSYAVMVEAICDNTDLIYEMEKHDETLRE 152

Query: 158 KANW 161
           K ++
Sbjct: 153 KNDF 156


>gi|86149605|ref|ZP_01067835.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni CF93-6]
 gi|86151167|ref|ZP_01069382.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 260.94]
 gi|86153704|ref|ZP_01071907.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni HB93-13]
 gi|88597173|ref|ZP_01100408.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 84-25]
 gi|121613260|ref|YP_999944.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. jejuni 81-176]
 gi|157414529|ref|YP_001481785.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. jejuni 81116]
 gi|167004901|ref|ZP_02270659.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni 81-176]
 gi|218561895|ref|YP_002343674.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|283955655|ref|ZP_06373148.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 1336]
 gi|315123818|ref|YP_004065822.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           jejuni subsp. jejuni ICDCCJ07001]
 gi|85839873|gb|EAQ57132.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni CF93-6]
 gi|85841514|gb|EAQ58761.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 260.94]
 gi|85842665|gb|EAQ59877.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni HB93-13]
 gi|87250215|gb|EAQ73173.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 81-176]
 gi|88190234|gb|EAQ94208.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 84-25]
 gi|112359601|emb|CAL34386.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|157385493|gb|ABV51808.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni 81116]
 gi|283792880|gb|EFC31656.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 1336]
 gi|284925507|gb|ADC27859.1| ribonucleoside-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. jejuni IA3902]
 gi|307747171|gb|ADN90441.1| Ribonucleoside-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. jejuni M1]
 gi|315017540|gb|ADT65633.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           jejuni subsp. jejuni ICDCCJ07001]
 gi|315928159|gb|EFV07477.1| ribonucleotide reductase, small chain family protein [Campylobacter
           jejuni subsp. jejuni DFVF1099]
 gi|315932030|gb|EFV10983.1| ribonucleotide reductase, small chain family protein [Campylobacter
           jejuni subsp. jejuni 327]
          Length = 340

 Score = 45.1 bits (105), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 2/124 (1%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY WA + +     N W P EV    D   ++    LT  E+ M         S +S   
Sbjct: 35  KYTWALKLWDLMEANTWFPKEVDTTKDALDYRC--NLTAGEKRMYDLVWSQLISMDSFQT 92

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
           NN+   I  +++ PE    L RQA+EEA HS ++  ++ ++  +   ++ M +   ++  
Sbjct: 93  NNLADNINPYITAPEINAVLARQAYEEANHSKSYAVMVEAICDNTDLIYEMEKHDETLRE 152

Query: 158 KANW 161
           K ++
Sbjct: 153 KNDF 156


>gi|257062099|ref|YP_003139987.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8802]
 gi|256592265|gb|ACV03152.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8802]
          Length = 355

 Score = 45.1 bits (105), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 4/110 (3%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
           +++ QL  ++Y WA   Y     N W+P  + +  D+  + +   LTDDER      L +
Sbjct: 37  TNLMQLNDVRYTWAVGLYQQMRENFWIPQRLDITQDVTDYAN---LTDDERYAYDGILSY 93

Query: 89  FASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
               +S+   NI   +   ++ PE    +  Q  +E +H+ ++QYII ++
Sbjct: 94  LTFLDSVQTCNIP-HLKSSVTAPEVSLCMAEQISQEGMHNQSYQYIIETI 142


>gi|31793160|ref|NP_855653.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           bovis AF2122/97]
 gi|224990358|ref|YP_002645045.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium
           bovis BCG str. Tokyo 172]
 gi|260205258|ref|ZP_05772749.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis K85]
 gi|289574653|ref|ZP_06454880.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis K85]
 gi|31618751|emb|CAD94705.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF1
           (RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT) (R2F PROTEIN)
           [Mycobacterium bovis AF2122/97]
 gi|224773471|dbj|BAH26277.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium
           bovis BCG str. Tokyo 172]
 gi|289539084|gb|EFD43662.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis K85]
          Length = 322

 Score = 45.1 bits (105), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/163 (22%), Positives = 71/163 (43%), Gaps = 14/163 (8%)

Query: 32  NQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFAS 91
           N+LL  K    WE+      N W+P ++P+ +DLA W++ +       + +   L    +
Sbjct: 15  NRLLDAKDLQVWERL---TGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVFTGLTLLDT 71

Query: 92  SESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMY 149
           +++ V     +A+      P     L   AF E+VH+ ++  I ++L   +   + F+  
Sbjct: 72  AQATVG---AVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDDAFDWS 128

Query: 150 REVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
            + P +  KA   + Y +   +       KR+ S ++  S  F
Sbjct: 129 EQNPYLQRKAQIIVDYYRGDDAL------KRKASSVMLESFLF 165


>gi|15841457|ref|NP_336494.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis CDC1551]
 gi|57116932|ref|YP_177853.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis H37Rv]
 gi|148661790|ref|YP_001283313.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis H37Ra]
 gi|148823195|ref|YP_001287949.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis F11]
 gi|167970496|ref|ZP_02552773.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis H37Ra]
 gi|215404217|ref|ZP_03416398.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 02_1987]
 gi|215411671|ref|ZP_03420467.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 94_M4241A]
 gi|215427336|ref|ZP_03425255.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T92]
 gi|215430897|ref|ZP_03428816.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis EAS054]
 gi|215446189|ref|ZP_03432941.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T85]
 gi|218753694|ref|ZP_03532490.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis GM 1503]
 gi|219557941|ref|ZP_03537017.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T17]
 gi|253798971|ref|YP_003031972.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis KZN 1435]
 gi|254232151|ref|ZP_04925478.1| ribonucleoside-diphosphate reductase (beta chain) nrdF1
           [Mycobacterium tuberculosis C]
 gi|254364798|ref|ZP_04980844.1| ribonucleoside-diphosphate reductase (beta chain) nrdF1
           [Mycobacterium tuberculosis str. Haarlem]
 gi|254551002|ref|ZP_05141449.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis '98-R604 INH-RIF-EM']
 gi|260186953|ref|ZP_05764427.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis CPHL_A]
 gi|260201080|ref|ZP_05768571.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T46]
 gi|289443470|ref|ZP_06433214.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
           tuberculosis T46]
 gi|289447597|ref|ZP_06437341.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis CPHL_A]
 gi|289554242|ref|ZP_06443452.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis KZN 605]
 gi|289570077|ref|ZP_06450304.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis T17]
 gi|289746076|ref|ZP_06505454.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 02_1987]
 gi|289750559|ref|ZP_06509937.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis T92]
 gi|289754082|ref|ZP_06513460.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis EAS054]
 gi|289758093|ref|ZP_06517471.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T85]
 gi|289762136|ref|ZP_06521514.1| ribonucleoside-diphosphate reductase (beta chain) nrdF1
           [Mycobacterium tuberculosis GM 1503]
 gi|294996911|ref|ZP_06802602.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 210]
 gi|297634550|ref|ZP_06952330.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis KZN 4207]
 gi|297731538|ref|ZP_06960656.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis KZN R506]
 gi|298525478|ref|ZP_07012887.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 94_M4241A]
 gi|306776213|ref|ZP_07414550.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu001]
 gi|306779994|ref|ZP_07418331.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu002]
 gi|306784744|ref|ZP_07423066.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu003]
 gi|306789101|ref|ZP_07427423.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu004]
 gi|306793436|ref|ZP_07431738.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu005]
 gi|306797819|ref|ZP_07436121.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu006]
 gi|306803700|ref|ZP_07440368.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu008]
 gi|306808274|ref|ZP_07444942.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu007]
 gi|306968097|ref|ZP_07480758.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu009]
 gi|306972322|ref|ZP_07484983.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu010]
 gi|307080033|ref|ZP_07489203.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu011]
 gi|307084607|ref|ZP_07493720.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu012]
 gi|313658871|ref|ZP_07815751.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis KZN V2475]
 gi|1710397|sp|Q10840|RIR2A_MYCTU RecName: Full=Ribonucleoside-diphosphate reductase subunit beta
           nrdF1; AltName: Full=Ribonucleotide reductase R2-1 small
           subunit; AltName: Full=Ribonucleotide reductase small
           subunit 1
 gi|13881697|gb|AAK46308.1| ribonucleoside-diphosphate reductase R2-1, beta subunit
           [Mycobacterium tuberculosis CDC1551]
 gi|38490297|emb|CAE55444.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF1
           (RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT) (R2F PROTEIN)
           [Mycobacterium tuberculosis H37Rv]
 gi|124601210|gb|EAY60220.1| ribonucleoside-diphosphate reductase (beta chain) nrdF1
           [Mycobacterium tuberculosis C]
 gi|134150312|gb|EBA42357.1| ribonucleoside-diphosphate reductase (beta chain) nrdF1
           [Mycobacterium tuberculosis str. Haarlem]
 gi|148505942|gb|ABQ73751.1| ribonucleoside-diphosphate reductase subunit beta NrdF1
           [Mycobacterium tuberculosis H37Ra]
 gi|148721722|gb|ABR06347.1| ribonucleoside-diphosphate reductase beta subunit nrdF1
           [Mycobacterium tuberculosis F11]
 gi|253320474|gb|ACT25077.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis KZN 1435]
 gi|289416389|gb|EFD13629.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
           tuberculosis T46]
 gi|289420555|gb|EFD17756.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis CPHL_A]
 gi|289438874|gb|EFD21367.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis KZN 605]
 gi|289543831|gb|EFD47479.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis T17]
 gi|289686604|gb|EFD54092.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 02_1987]
 gi|289691146|gb|EFD58575.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis T92]
 gi|289694669|gb|EFD62098.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis EAS054]
 gi|289709642|gb|EFD73658.1| ribonucleoside-diphosphate reductase (beta chain) nrdF1
           [Mycobacterium tuberculosis GM 1503]
 gi|289713657|gb|EFD77669.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T85]
 gi|298495272|gb|EFI30566.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 94_M4241A]
 gi|308215325|gb|EFO74724.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu001]
 gi|308327098|gb|EFP15949.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu002]
 gi|308330477|gb|EFP19328.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu003]
 gi|308334311|gb|EFP23162.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu004]
 gi|308338113|gb|EFP26964.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu005]
 gi|308341805|gb|EFP30656.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu006]
 gi|308345291|gb|EFP34142.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu007]
 gi|308349595|gb|EFP38446.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu008]
 gi|308354222|gb|EFP43073.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu009]
 gi|308358200|gb|EFP47051.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu010]
 gi|308362132|gb|EFP50983.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu011]
 gi|308365786|gb|EFP54637.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu012]
 gi|323719468|gb|EGB28595.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis CDC1551A]
 gi|326903590|gb|EGE50523.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis W-148]
 gi|328458726|gb|AEB04149.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis KZN 4207]
          Length = 322

 Score = 45.1 bits (105), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/163 (22%), Positives = 71/163 (43%), Gaps = 14/163 (8%)

Query: 32  NQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFAS 91
           N+LL  K    WE+      N W+P ++P+ +DLA W++ +       + +   L    +
Sbjct: 15  NRLLDAKDLQVWERL---TGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVFTGLTLLDT 71

Query: 92  SESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMY 149
           +++ V     +A+      P     L   AF E+VH+ ++  I ++L   +   + F+  
Sbjct: 72  AQATVG---AVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDDAFDWS 128

Query: 150 REVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
            + P +  KA   + Y +   +       KR+ S ++  S  F
Sbjct: 129 EQNPYLQRKAQIIVDYYRGDDAL------KRKASSVMLESFLF 165


>gi|218249013|ref|YP_002374384.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8801]
 gi|218169491|gb|ACK68228.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8801]
          Length = 344

 Score = 45.1 bits (105), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 4/110 (3%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
           +++ QL  ++Y WA   Y     N W+P  + +  D+  + +   LTDDER      L +
Sbjct: 26  TNLMQLNDVRYTWAVGLYQQMRENFWIPQRLDITQDVTDYAN---LTDDERYAYDGILSY 82

Query: 89  FASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
               +S+   NI   +   ++ PE    +  Q  +E +H+ ++QYII ++
Sbjct: 83  LTFLDSVQTCNIP-HLKSSVTAPEVSLCMAEQISQEGMHNQSYQYIIETI 131


>gi|153952438|ref|YP_001397460.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. doylei 269.97]
 gi|152939884|gb|ABS44625.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. doylei 269.97]
          Length = 340

 Score = 45.1 bits (105), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 2/124 (1%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY WA + +     N W P EV    D   ++    LT  E+ M         S +S   
Sbjct: 35  KYTWALKLWDLMEANTWFPKEVDTTKDALDYRC--NLTAGEKRMYDLVWSQLISMDSFQT 92

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
           NN+   I  +++ PE    L RQA+EEA HS ++  ++ ++  +   ++ M +   ++  
Sbjct: 93  NNLADNINPYITAPEINAVLARQAYEEANHSKSYAVMVEAICDNTDLIYEMEKHDETLRE 152

Query: 158 KANW 161
           K ++
Sbjct: 153 KNDF 156


>gi|294887656|ref|XP_002772196.1| ribonucleoside-diphosphate reductase small chain, putative
           [Perkinsus marinus ATCC 50983]
 gi|239876179|gb|EER04012.1| ribonucleoside-diphosphate reductase small chain, putative
           [Perkinsus marinus ATCC 50983]
          Length = 82

 Score = 45.1 bits (105), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 3/77 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W   E+ +  DL  W++   LT +E+  IK  L FFA+S+ +V  N+       +  PE 
Sbjct: 9   WTAEEIDLGQDLRDWET---LTKNEQHFIKNVLAFFAASDGIVMENLASKFSCEVQIPEA 65

Query: 114 RQYLLRQAFEEAVHSHT 130
           R +   Q   E +HS T
Sbjct: 66  RAFYGFQTGMETIHSET 82


>gi|51869996|ref|YP_073549.1| Ribonucleotide reductase [Lymphocystis disease virus - isolate
           China]
 gi|51858204|gb|AAU10888.1| Ribonucleotide reductase [Lymphocystis disease virus - isolate
           China]
          Length = 374

 Score = 45.1 bits (105), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 9/143 (6%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA E      N HW   E+ + DD+  WK    L D E+  I + L  F   +  
Sbjct: 73  PFHYPWAVELRSLHENMHWTEKEISLADDVTDWKI-GKLLDVEKKFITQILRLFTQLDVS 131

Query: 96  VA---NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
           V    +N  + I++   N E R  L   A  E  H   +  +  +LGL E + ++ + + 
Sbjct: 132 VGQLYHNTFIPIFK---NNEIRNMLCSFACREGTHQQAYALLNDTLGLPESD-YSAFLKY 187

Query: 153 PSITAKANWALQY-TQTLSSPSF 174
             +T K ++     T T+ + +F
Sbjct: 188 KQMTDKTDFMSDMRTDTIGNVAF 210


>gi|151943458|gb|EDN61769.1| ribonucleotide reductase [Saccharomyces cerevisiae YJM789]
 gi|190406805|gb|EDV10072.1| ribonucleotide reductase [Saccharomyces cerevisiae RM11-1a]
 gi|256270921|gb|EEU06048.1| Rnr4p [Saccharomyces cerevisiae JAY291]
 gi|259146684|emb|CAY79941.1| Rnr4p [Saccharomyces cerevisiae EC1118]
 gi|323333575|gb|EGA74969.1| Rnr4p [Saccharomyces cerevisiae AWRI796]
 gi|323348450|gb|EGA82695.1| Rnr4p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 345

 Score = 44.7 bits (104), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 7/140 (5%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           M N+R  V  + P+KY   W  Y     + W   E+ +  D   ++    LTDD++  I 
Sbjct: 29  MENSRRFV--MFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQK---LTDDQKTYIG 83

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
             L    SS++LV   ++      L NPE + +   Q   E ++S  +  ++ +   D  
Sbjct: 84  NLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMVDAFFKDPK 143

Query: 144 E--LFNMYREVPSITAKANW 161
              LF     +P +  K  +
Sbjct: 144 NIPLFKEIANLPEVKHKTAF 163


>gi|205356539|ref|ZP_03223302.1| ribonucleoside diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni CG8421]
 gi|205345544|gb|EDZ32184.1| ribonucleoside diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni CG8421]
          Length = 340

 Score = 44.7 bits (104), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 2/124 (1%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY WA + +     N W P EV    D   ++    LT  E+ M         S +S   
Sbjct: 35  KYTWALKLWDLMEANTWFPKEVDTTKDALDYRC--NLTVGEKRMYDLVWSQLISMDSFQT 92

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
           NN+   I  +++ PE    L RQA+EEA HS ++  ++ ++  +   ++ M +   ++  
Sbjct: 93  NNLADNINPYITAPEINAVLARQAYEEANHSKSYAVMVEAICDNTDLIYEMEKHDETLRE 152

Query: 158 KANW 161
           K ++
Sbjct: 153 KNDF 156


>gi|154508355|ref|ZP_02043997.1| hypothetical protein ACTODO_00852 [Actinomyces odontolyticus ATCC
           17982]
 gi|153797989|gb|EDN80409.1| hypothetical protein ACTODO_00852 [Actinomyces odontolyticus ATCC
           17982]
          Length = 425

 Score = 44.7 bits (104), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 3/89 (3%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P ++P+ +DL  WK+   LT DE+LM  R        ++L      +++     
Sbjct: 133 TGNFWLPEKIPLSNDLPSWKT---LTKDEQLMTNRVFTGLTLLDTLQGTVGAVSLIPDAR 189

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            P         AF E+VH+ ++  I ++L
Sbjct: 190 TPHEEAVYTNIAFMESVHAKSYSSIFSTL 218


>gi|50288235|ref|XP_446546.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49525854|emb|CAG59473.1| unnamed protein product [Candida glabrata]
          Length = 335

 Score = 44.7 bits (104), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/131 (21%), Positives = 56/131 (42%), Gaps = 5/131 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+KY   W  Y       W   ++ +  D+  W++   L+  ++      L   + ++
Sbjct: 20  MFPIKYHEIWAAYKKVEAAFWTAEDMELAKDVKDWET---LSAGQKEFFGNYLAICSRTD 76

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYRE 151
           ++V  NIV      L NPE + +   Q   E ++   +  ++ +L   +D   LF    +
Sbjct: 77  NIVNKNIVEKFSAELQNPEGKSFYGFQIMMENIYDEIYSMLVDALFTSVDNIPLFKAVCQ 136

Query: 152 VPSITAKANWA 162
              + AK+ WA
Sbjct: 137 QEEVKAKSEWA 147


>gi|57237291|ref|YP_178304.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           jejuni RM1221]
 gi|148926379|ref|ZP_01810063.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni CG8486]
 gi|57166095|gb|AAW34874.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni RM1221]
 gi|145844771|gb|EDK21876.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni CG8486]
 gi|315057661|gb|ADT71990.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Campylobacter jejuni subsp. jejuni S3]
          Length = 340

 Score = 44.7 bits (104), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 2/124 (1%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY WA + +     N W P EV    D   ++    LT  E+ M         S +S   
Sbjct: 35  KYTWALKLWDLMEANTWFPKEVDTTKDALDYRC--NLTVGEKRMYDLVWSQLISMDSFQT 92

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
           NN+   I  +++ PE    L RQA+EEA HS ++  ++ ++  +   ++ M +   ++  
Sbjct: 93  NNLADNINPYITAPEINAVLARQAYEEANHSKSYAVMVEAICDNTDLIYEMEKHDETLRE 152

Query: 158 KANW 161
           K ++
Sbjct: 153 KNDF 156


>gi|126654703|ref|ZP_01726237.1| hypothetical protein CY0110_09717 [Cyanothece sp. CCY0110]
 gi|126623438|gb|EAZ94142.1| hypothetical protein CY0110_09717 [Cyanothece sp. CCY0110]
          Length = 352

 Score = 44.7 bits (104), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 54/110 (49%), Gaps = 4/110 (3%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
           +++ QL  ++Y WA   Y     N W+P  + +  D+  + +   LTDDER      L +
Sbjct: 34  TNLMQLNDVRYAWAVGLYQQMRENFWIPQRLDVTQDVTDYAN---LTDDERYAYDGILSY 90

Query: 89  FASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
               +S+   NI   +   ++ PE    +  Q  +E +H+ ++QY+I ++
Sbjct: 91  LTFLDSVQTCNIP-HLKSSITAPEISLCMAEQISQEGMHNQSYQYLIETI 139


>gi|222824493|ref|YP_002576067.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           lari RM2100]
 gi|222539714|gb|ACM64815.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           lari RM2100]
          Length = 340

 Score = 44.7 bits (104), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 65/144 (45%), Gaps = 3/144 (2%)

Query: 19  VDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           ++D+++ N     +      KY WA + +     N W P EV    D   ++    LT  
Sbjct: 15  LNDRKVFNGNPHGILNFTKAKYTWALKLWDLMEANTWFPKEVDTTKDALDYRC--NLTVA 72

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+ M         S +S   NN+   I  +++ PE    L RQA+EEA HS ++  ++ +
Sbjct: 73  EKRMYDLVWSQLISMDSFQTNNLADNINPYITAPEINAVLARQAYEEANHSKSYAVMVEA 132

Query: 138 LGLDEGELFNMYREVPSITAKANW 161
           +  +   ++ M +   ++  K ++
Sbjct: 133 ICENTDLIYEMEKHDETLREKNDF 156


>gi|323337480|gb|EGA78728.1| Rnr4p [Saccharomyces cerevisiae Vin13]
          Length = 328

 Score = 44.7 bits (104), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 7/140 (5%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           M N+R  V  + P+KY   W  Y     + W   E+ +  D   ++    LTDD++  I 
Sbjct: 12  MENSRRFV--MFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQK---LTDDQKTYIG 66

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
             L    SS++LV   ++      L NPE + +   Q   E ++S  +  ++ +   D  
Sbjct: 67  NLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMVDAFFKDPK 126

Query: 144 E--LFNMYREVPSITAKANW 161
              LF     +P +  K  +
Sbjct: 127 NIPLFKEIANLPEVKHKTAF 146


>gi|315637824|ref|ZP_07893014.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           upsaliensis JV21]
 gi|315482065|gb|EFU72679.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           upsaliensis JV21]
          Length = 340

 Score = 44.7 bits (104), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 2/124 (1%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY WA + +     N W P EV    D   ++    LT  E+ M         S +S   
Sbjct: 35  KYTWALKLWDLMEANTWFPKEVDTTRDALDYRC--NLTAAEKRMYDLVWSQLISMDSFQT 92

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
           NN+   I  +++ PE    L RQA+EEA HS ++  ++ ++  +   ++ M +   ++  
Sbjct: 93  NNLADNINPYITAPEINAVLARQAYEEANHSKSYAVMVEAICDNTDLIYEMEKHDATLRE 152

Query: 158 KANW 161
           K ++
Sbjct: 153 KNDF 156


>gi|326782536|ref|YP_004323092.1| ribonucleotide reductase A subunit [Synechococcus phage S-SM1]
 gi|310002750|gb|ADO97149.1| ribonucleotide reductase A subunit [Synechococcus phage S-SM1]
          Length = 386

 Score = 44.7 bits (104), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 3/107 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +Q D + +++   L+D+++ +   NL +    +S+      +A   + S PE 
Sbjct: 57  WRPEEVSLQKDRSDYQT---LSDEQKHIFTSNLKYQIMLDSVQGRGPGMAFIPYCSLPEL 113

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKAN 160
              +    F E VHS ++ YII ++  D  E+F+   +   + ++A+
Sbjct: 114 EACMTVWEFMEMVHSRSYTYIIKNVYSDPSEVFDTILDDEKVMSRAS 160


>gi|146322252|ref|YP_001174719.1| putative ribonucleotide reductase subunit beta [Lactococcus lactis]
 gi|145968743|gb|ABQ00021.1| putative ribonucleotide reductase subunit beta [Lactococcus lactis]
          Length = 316

 Score = 44.3 bits (103), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 58/115 (50%), Gaps = 14/115 (12%)

Query: 41  WAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNI 100
           + W+K   A    W+ T VP+ +DL  W+    L+D E+ ++K+ +G  A  ++L +   
Sbjct: 18  YVWDK---ATAQFWLDTRVPVSNDLLDWRK---LSDMEKEVVKKAVGGLALLDTLQSEEG 71

Query: 101 VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           + A+ ++    + R  L    F E++H+ T+  I+ SL        N ++++  I
Sbjct: 72  LYALKKNARTLKERAVLSDFTFMESIHAKTYGTILISL--------NTFKDIEEI 118


>gi|171779436|ref|ZP_02920400.1| hypothetical protein STRINF_01281 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282053|gb|EDT47484.1| hypothetical protein STRINF_01281 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 316

 Score = 44.3 bits (103), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 58/115 (50%), Gaps = 14/115 (12%)

Query: 41  WAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNI 100
           + W+K   A    W+ T VP+ +DL  W+    L+D E+ ++K+ +G  A  ++L +   
Sbjct: 18  YVWDK---ATAQFWLDTRVPVSNDLLDWRK---LSDMEKEVVKKAVGGLALLDTLQSEEG 71

Query: 101 VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           + A+ ++    + R  L    F E++H+ T+  I+ SL        N ++++  I
Sbjct: 72  LYALKKNARTLKERAVLSDFTFMESIHAKTYGTILISL--------NTFKDIEEI 118


>gi|293572347|ref|ZP_06683339.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E980]
 gi|291607581|gb|EFF36911.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E980]
          Length = 316

 Score = 44.3 bits (103), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 58/115 (50%), Gaps = 14/115 (12%)

Query: 41  WAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNI 100
           + W+K   A    W+ T VP+ +DL  W+    L+D E+ ++K+ +G  A  ++L +   
Sbjct: 18  YVWDK---ATAQFWLDTRVPVSNDLLDWRK---LSDMEKEVVKKAVGGLALLDTLQSEEG 71

Query: 101 VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           + A+ ++    + R  L    F E++H+ T+  I+ SL        N ++++  I
Sbjct: 72  LYALKKNARTLKERAVLSDFTFMESIHAKTYGTILISL--------NTFKDIEEI 118


>gi|57505748|ref|ZP_00371674.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           upsaliensis RM3195]
 gi|57016021|gb|EAL52809.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           upsaliensis RM3195]
          Length = 340

 Score = 44.3 bits (103), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 2/124 (1%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY WA + +     N W P EV    D   ++    LT  E+ M         S +S   
Sbjct: 35  KYTWALKLWDLMEANTWFPKEVDTTRDALDYRCH--LTAAEKRMYDLVWSQLISMDSFQT 92

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
           NN+   I  +++ PE    L RQA+EEA HS ++  ++ ++  +   ++ M +   ++  
Sbjct: 93  NNLADNINPYITAPEINAVLARQAYEEANHSKSYAVMVETICDNTDLIYEMEKHDATLRE 152

Query: 158 KANW 161
           K ++
Sbjct: 153 KNDF 156


>gi|1395207|gb|AAB81405.1| ribonucleotide reductase R2-1 small subunit [Mycobacterium
           tuberculosis str. Erdman]
          Length = 321

 Score = 44.3 bits (103), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 35/163 (21%), Positives = 71/163 (43%), Gaps = 15/163 (9%)

Query: 32  NQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFAS 91
           N+LL  K    WE+      N W+P ++P+ +DLA W++ +       + +   L    +
Sbjct: 15  NRLLDAKDLQVWERL---TGNFWLPEKIPLSNDLASWQTLSSTEQQTTIRVFTGLTLLDT 71

Query: 92  SESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMY 149
           +++ V     +A+      P     L   AF E+VH+ ++  I ++L   +   + F+  
Sbjct: 72  AQATVG---AVAMIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDDAFDWS 128

Query: 150 REVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
            + P +  KA   + Y +   +       + +RS ++  S  F
Sbjct: 129 EQNPYLQRKAQIIVDYYRGDDA-------QAQRSSVMLESFLF 164


>gi|293193572|ref|ZP_06609842.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces
           odontolyticus F0309]
 gi|292819928|gb|EFF78930.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces
           odontolyticus F0309]
          Length = 320

 Score = 43.9 bits (102), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 3/89 (3%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P ++P+ +DL  WK+   LT DE+LM  R        ++L      +++     
Sbjct: 28  TGNFWLPEKIPLSNDLPSWKT---LTKDEQLMTNRVFTGLTLLDTLQGTVGAVSLIPDAR 84

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            P         AF E+VH+ ++  I ++L
Sbjct: 85  TPHEEAVYTNIAFMESVHAKSYSSIFSTL 113


>gi|15613065|ref|NP_241368.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus
           halodurans C-125]
 gi|14195134|sp|Q9KFH7|RIR2_BACHD RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|10173115|dbj|BAB04221.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus
           halodurans C-125]
          Length = 345

 Score = 43.9 bits (102), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 25/102 (24%), Positives = 52/102 (50%), Gaps = 4/102 (3%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +++ WA+  Y +   N W P E+ M  D   + +   LT+ E+   K+ +G  A  +S V
Sbjct: 35  VRFSWAYPLYKNMLANFWTPFEINMSHDAKQFPT---LTETEQEAFKKIIGLLAFLDS-V 90

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
             +  +    +L++      +   +F+E VH+ ++ Y+++SL
Sbjct: 91  QTDYSMRAAEYLTDSSLAALMSVLSFQEVVHNQSYSYVLSSL 132


>gi|326783148|ref|YP_004323545.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-HM2]
 gi|310005566|gb|ADO99954.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-HM2]
          Length = 394

 Score = 43.9 bits (102), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 3/106 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +Q D + +K+   LT +++ +   NL +    +S+      +A   + S PE 
Sbjct: 65  WRPEEVSLQKDRSDYKT---LTPEQKHIYTSNLKYQIMLDSVQGRGPGMAFMPYCSLPEL 121

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKA 159
              +      E +HS ++ YII ++  D  E+F+   + P I ++A
Sbjct: 122 ESAMNVWQLMEMIHSRSYTYIIKNVYPDASEVFDTVLDDPKIMSRA 167


>gi|172036555|ref|YP_001803056.1| ribonucleoside-diphosphate reductase beta subunit [Cyanothece sp.
           ATCC 51142]
 gi|171698009|gb|ACB50990.1| ribonucleoside-diphosphate reductase beta subunit [Cyanothece sp.
           ATCC 51142]
          Length = 352

 Score = 43.9 bits (102), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 64/133 (48%), Gaps = 5/133 (3%)

Query: 7   LSPIQAGEKRVNVDDKRM-LNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           ++PI   E    ++++ +     +++ QL  ++Y WA   Y     N W+P  + +  D+
Sbjct: 11  INPIFNPEGDDAIENRSIWFGNTTNLMQLNDVRYTWAVGLYQQMRENFWIPQRLDVTQDV 70

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             + +   LTDDER      L +    +S+   NI   +   ++ PE    +  Q  +E 
Sbjct: 71  TDYAN---LTDDERYAYDGILSYLTFLDSVQTCNIP-HLKSSITAPEISLCMAEQISQEG 126

Query: 126 VHSHTFQYIITSL 138
           +H+ ++QY+I ++
Sbjct: 127 MHNQSYQYLIETI 139


>gi|41409770|ref|NP_962606.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           avium subsp. paratuberculosis K-10]
 gi|81413257|sp|Q73TP6|RIR2H_MYCPA RecName: Full=R2-like ligand binding oxidase; AltName:
           Full=Ribonucleotide reductase R2 subunit homolog;
           AltName: Full=Ribonucleotide reductase small subunit
           homolog
 gi|41398602|gb|AAS06222.1| NrdB [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 311

 Score = 43.9 bits (102), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 12/122 (9%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
           LPLK       +       W P ++    D A W+    LTDDER    R    F + E 
Sbjct: 19  LPLKL------FAGGNAKFWNPADIDFSRDRADWER---LTDDERSYATRLCAEFIAGEE 69

Query: 95  LVANNI--VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
            V  +I   +A  R         YL + AFEEA H   F+  + ++G+ + +L +   +V
Sbjct: 70  SVTQDIQPFMAAMRAEGRLGDEMYLTQFAFEEAKHVQVFRMWLDAVGVTD-DLHHFLDDV 128

Query: 153 PS 154
           PS
Sbjct: 129 PS 130


>gi|298256109|gb|ADI71333.1| ribonucleoside diphosphate reductase beta subunit-like protein
           [Short-finned eel ranavirus]
          Length = 202

 Score = 43.9 bits (102), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 2/126 (1%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA +        HW+ TE+ ++DD+  WKS   +T  E+  +   L  F   +  
Sbjct: 32  PFRYAWAEDIRTKHEKVHWVETEINLRDDVTDWKS-GVMTPGEKAFVSCVLRLFTQLDVE 90

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V    +  + +     E R  L   A  EA+H   +  +  +LG+ + E +  + +   +
Sbjct: 91  VGALYLDHLTQVFRCNEIRNMLTSFACREAIHQKAYSLLNDTLGMPDCE-YQAFADYEEM 149

Query: 156 TAKANW 161
           T K ++
Sbjct: 150 TDKLDF 155


>gi|298256099|gb|ADI71328.1| ribonucleoside diphosphate reductase beta subunit-like protein
           [Epizootic haematopoietic necrosis virus]
          Length = 202

 Score = 43.9 bits (102), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 2/126 (1%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA +        HW+ TE+ ++DD+  WKS   +T  E+  +   L  F   +  
Sbjct: 32  PFRYAWAEDIRTKHEKVHWVETEINLRDDVTDWKS-GVMTPGEKAFVSCVLRLFTQLDVE 90

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V    +  + +     E R  L   A  EA+H   +  +  +LG+ + E +  + +   +
Sbjct: 91  VGALYLDHLAQVFRCNEIRNMLTSFACREAIHQKAYSLLNDTLGMPDCE-YQAFADYEEM 149

Query: 156 TAKANW 161
           T K ++
Sbjct: 150 TDKLDF 155


>gi|118465897|ref|YP_884058.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           avium 104]
 gi|254777375|ref|ZP_05218891.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           avium subsp. avium ATCC 25291]
 gi|238055303|sp|A0QMC0|RIR2H_MYCA1 RecName: Full=R2-like ligand binding oxidase; AltName:
           Full=Ribonucleotide reductase R2 subunit homolog;
           AltName: Full=Ribonucleotide reductase small subunit
           homolog
 gi|118167184|gb|ABK68081.1| ribonucleotide-diphosphate reductase beta subunit [Mycobacterium
           avium 104]
          Length = 311

 Score = 43.9 bits (102), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 12/122 (9%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
           LPLK       +       W P ++    D A W+    LTDDER    R    F + E 
Sbjct: 19  LPLKL------FAGGNAKFWNPADIDFSRDRADWER---LTDDERSYATRLCAEFIAGEE 69

Query: 95  LVANNI--VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
            V  +I   +A  R         YL + AFEEA H   F+  + ++G+ + +L +   +V
Sbjct: 70  SVTQDIQPFMAAMRAEGRLGDEMYLTQFAFEEAKHVQVFRMWLDAVGVTD-DLHHFLDDV 128

Query: 153 PS 154
           PS
Sbjct: 129 PS 130


>gi|298256105|gb|ADI71331.1| ribonucleoside diphosphate reductase beta subunit-like protein
           [Ranavirus maxima/9995205/DNK]
          Length = 202

 Score = 43.9 bits (102), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 2/126 (1%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA +        HW+ TE+ ++DD+  WKS   +T  E+  +   L  F   +  
Sbjct: 32  PFRYAWAEDIRTKHEKVHWVETEINLRDDVTDWKS-GVMTPGEKAFVSCVLRLFTQLDVE 90

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V    +  + +     E R  L   A  EA+H   +  +  +LG+ + E +  + +   +
Sbjct: 91  VGALYLDHLTQVFRCNEIRNMLTSFACREAIHQKAYSLLNDTLGMPDCE-YQAFADYEEM 149

Query: 156 TAKANW 161
           T K ++
Sbjct: 150 TDKLDF 155


>gi|298256095|gb|ADI71326.1| ribonucleoside diphosphate reductase beta subunit-like protein [Cod
           iridovirus/15/04.11.92/DNK]
 gi|298256103|gb|ADI71330.1| ribonucleoside diphosphate reductase beta subunit-like protein
           [Pike-perch iridovirus]
          Length = 202

 Score = 43.9 bits (102), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 2/126 (1%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA +        HW+ TE+ ++DD+  WKS   +T  E+  +   L  F   +  
Sbjct: 32  PFRYAWAEDIRTKHEKVHWVETEINLRDDVTDWKS-GVMTPGEKAFVSCVLRLFTQLDVE 90

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V    +  + +     E R  L   A  EA+H   +  +  +LG+ + E +  + +   +
Sbjct: 91  VGALYLDHLTQVFRCNEIRNMLTSFACREAIHQKAYSLLNDTLGMPDCE-YQAFADYEEM 149

Query: 156 TAKANW 161
           T K ++
Sbjct: 150 TDKLDF 155


>gi|326784480|ref|YP_004325029.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM7]
 gi|310004513|gb|ADO98905.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM7]
          Length = 388

 Score = 43.9 bits (102), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 14/126 (11%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +Q D A +     LTD ++ +   NL +    +S+      +A   + S PE 
Sbjct: 58  WRPEEVSLQKDRADYAQ---LTDQQKHIFTSNLKYQIMLDSVQGRAPGMAFIPYCSLPEL 114

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKA-----------NWA 162
              +    F E +HS ++ YII ++  D  ELF+      +I ++A           N+A
Sbjct: 115 EGCMQVWQFMEMIHSRSYTYIIKNVYSDPSELFDTILTDDNILSRAESVTKSYDDFINYA 174

Query: 163 LQYTQT 168
            +Y Q+
Sbjct: 175 HEYDQS 180


>gi|298256093|gb|ADI71325.1| ribonucleoside diphosphate reductase beta subunit-like protein
           [Bohle iridovirus]
          Length = 202

 Score = 43.9 bits (102), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 2/126 (1%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA +        HW+ TE+ ++DD+  WKS   +T  E+  +   L  F   +  
Sbjct: 32  PFRYAWAEDIRTKHEKVHWVETEINLRDDVTDWKS-GVMTPGEKAFVSCVLRLFTQLDVE 90

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V    +  + +     E R  L   A  EA+H   +  +  +LG+ + E +  + +   +
Sbjct: 91  VGALYLDHLTQVFRCNEIRNMLTSFACREAIHQKAYSLLNDTLGMPDCE-YQAFADYGEM 149

Query: 156 TAKANW 161
           T K ++
Sbjct: 150 TDKLDF 155


>gi|323487827|ref|ZP_08093085.1| ribonucleotide-diphosphate reductase subunit beta [Planococcus
           donghaensis MPA1U2]
 gi|323398561|gb|EGA91349.1| ribonucleotide-diphosphate reductase subunit beta [Planococcus
           donghaensis MPA1U2]
          Length = 348

 Score = 43.5 bits (101), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 6/124 (4%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           + Y   ++ Y +   N W   E+ MQDD+  W S + +  D  L I   L   AS +SL 
Sbjct: 38  IAYPQMYDLYQALLANFWKAQEINMQDDIKQWDSLSSVEKDVFLRINTQL---ASLDSLQ 94

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPS 154
              +  A+  ++++   +      + +EAVH+ ++ YI++SL    ++ E FN  +  P 
Sbjct: 95  TPTMSQAM-DYVTDSSFKAIFAVISQQEAVHTESYSYILSSLVSVSEQNERFNQAKSDPV 153

Query: 155 ITAK 158
           +  +
Sbjct: 154 VQKR 157


>gi|156847976|ref|XP_001646871.1| hypothetical protein Kpol_2002p84 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117552|gb|EDO19013.1| hypothetical protein Kpol_2002p84 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 351

 Score = 43.5 bits (101), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 29/123 (23%), Positives = 55/123 (44%), Gaps = 2/123 (1%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY   ++ Y       W   E+    D+  W + + +T DE+    R L  FAS++
Sbjct: 38  LFPIKYHEIYDAYKKREALFWTAEELDFSKDIQNW-NDDKITKDEKEYFIRLLALFASND 96

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVP 153
            +   N+   +      PE + +   Q   + +H   +  +I SL  D+ +  +M+ E+ 
Sbjct: 97  -MDRENLTEHLSAECQTPEAKCFYGFQIMVDNIHQEVYGILIDSLVKDDEKRTSMFEEIK 155

Query: 154 SIT 156
            +T
Sbjct: 156 DLT 158


>gi|326784253|ref|YP_004324793.1| ribonucleotide reductase A subunit [Synechococcus phage S-SSM5]
 gi|310003484|gb|ADO97880.1| ribonucleotide reductase A subunit [Synechococcus phage S-SSM5]
          Length = 388

 Score = 43.5 bits (101), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 26/107 (24%), Positives = 54/107 (50%), Gaps = 3/107 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +Q D + +++   L+ +++ +   NL +    +S+      +A   + S PE 
Sbjct: 59  WRPEEVSLQKDRSDYQT---LSPEQKHIFTSNLKYQIMLDSVQGRGPGMAFIPYCSLPEL 115

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKAN 160
              +    F E +HS ++ YII ++  D GE+F+   +  ++  +A+
Sbjct: 116 EACMTVWEFMEMIHSRSYTYIIKNVYPDPGEVFDTILDDENVMERAS 162


>gi|312865304|ref|ZP_07725532.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           downei F0415]
 gi|311099415|gb|EFQ57631.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           downei F0415]
          Length = 316

 Score = 43.5 bits (101), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 57/115 (49%), Gaps = 14/115 (12%)

Query: 41  WAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNI 100
           + W+K   A    W+ T VP+ +DL  WK    L+D E+ ++K+ +G  A  ++L +   
Sbjct: 18  YVWDK---ATAQFWLDTRVPVSNDLLDWKQ---LSDLEKTVVKKAVGGLALLDTLQSEEG 71

Query: 101 VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           + AI ++    +         F E++H+ T+  I+ SL        N ++++ +I
Sbjct: 72  LYAIKKNARTQKELAVFSDFNFMESIHAKTYGTILISL--------NTFKDIEAI 118


>gi|159030376|emb|CAO91271.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 355

 Score = 43.5 bits (101), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 62/124 (50%), Gaps = 6/124 (4%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
           +++ QL  ++Y W+   Y     N W+P  + +  D+  +     LTD+ER      L +
Sbjct: 37  TNLMQLNDVRYTWSVGLYQQMRENFWIPQRLDITQDVTEY---GHLTDEERYAYDGILSY 93

Query: 89  FASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELF 146
               +S+   NI   +   ++ PE    +  Q  +EA+H+ ++QY+I ++   +  GE++
Sbjct: 94  LTFLDSVQTCNIP-HLKGSVTAPEISLCMAEQISQEAMHNQSYQYLIETIIPSDRRGEVY 152

Query: 147 NMYR 150
           + +R
Sbjct: 153 DFWR 156


>gi|118469232|ref|YP_886661.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           smegmatis str. MC2 155]
 gi|118469934|ref|YP_885432.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           smegmatis str. MC2 155]
 gi|118170519|gb|ABK71415.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
           smegmatis str. MC2 155]
 gi|118171221|gb|ABK72117.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
           smegmatis str. MC2 155]
          Length = 324

 Score = 43.1 bits (100), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 7/119 (5%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  W +   LTD+E+ +  R        +++      +++     
Sbjct: 32  TGNFWLPEKVPVSNDIQSWHT---LTDNEKQLTMRVFTGLTLLDTIQGTVGAVSLIPDAV 88

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR---EVPSITAKANWALQY 165
            P     L   AF E+VH+ ++  I ++L     E+ + +R   E P++  KA   +QY
Sbjct: 89  TPHEEAVLTNIAFMESVHAKSYSNIFSTL-CSTAEIDDAFRWSEENPNLQRKAAIVMQY 146


>gi|327409820|ref|YP_004347240.1| ribonucleoside-diphosphate reductase small chain [Lausannevirus]
 gi|326784994|gb|AEA07128.1| ribonucleoside-diphosphate reductase small chain [Lausannevirus]
          Length = 319

 Score = 43.1 bits (100), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 5/89 (5%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSN- 110
           +HW+P EV    D   W+    L+ +E+   K  L FFA  + LV  N+V    + +S+ 
Sbjct: 27  SHWIPEEVDTSKDAQDWQL---LSKEEKSFAKLILAFFAQFDGLVVENLVRHFQQEVSSF 83

Query: 111 -PECRQYLLRQAFEEAVHSHTFQYIITSL 138
             E   + + QA  E +H+ T+  +I  L
Sbjct: 84  AKEIEWFYILQAANELIHNETYMNLINVL 112


>gi|14970916|emb|CAC44510.1| putative ribonucleotide reductase small subunit [Sphaerechinus
           granularis]
          Length = 141

 Score = 43.1 bits (100), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 3/89 (3%)

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE- 144
           L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +I +   D  + 
Sbjct: 3   LAFFAASDGIVNENLVERFSQEVQIAEARCFYGFQIAIENIHSEMYSLLIDAYIKDAVQR 62

Query: 145 --LFNMYREVPSITAKANWALQYTQTLSS 171
             LFN    +P +T KA WAL +  + S+
Sbjct: 63  DYLFNAVETMPCVTKKAQWALDWISSDSA 91


>gi|157325080|ref|YP_001468505.1| gp125 [Listeria phage A511]
 gi|66732769|gb|AAY53360.1| gp57 [Listeria phage P100]
 gi|66733088|gb|AAY52906.1| gp125 [Listeria phage A511]
          Length = 343

 Score = 43.1 bits (100), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 28/124 (22%), Positives = 58/124 (46%), Gaps = 6/124 (4%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           ++Y   +  Y     N+W+P EV M+ D    K  N L+++E+      +G  A+ +S  
Sbjct: 33  IRYPSFYRAYKELTTNYWLPDEVDMKSDA---KQYNHLSEEEKYAFDSIIGLLATLDS-P 88

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELFNMYREVPS 154
               +  I  ++S+          A +EA+H+ ++ Y++ S+    ++  +F   R  P+
Sbjct: 89  QTRFIYNIAEYVSDASVHAITAIIAQQEAIHNESYSYVLASITNLQEQNRVFEEARTHPT 148

Query: 155 ITAK 158
           I  +
Sbjct: 149 IIKR 152


>gi|308177564|ref|YP_003916970.1| ribonucleoside-diphosphate reductase subunit beta [Arthrobacter
           arilaitensis Re117]
 gi|307745027|emb|CBT75999.1| ribonucleoside-diphosphate reductase beta chain [Arthrobacter
           arilaitensis Re117]
          Length = 324

 Score = 42.7 bits (99), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 3/90 (3%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
            NN W+P +VP+ +D+  W +   LT+DE+L+  R        ++L      +++     
Sbjct: 32  VNNFWLPEKVPLSNDIQSWGT---LTEDEKLLTMRVFTGLTLLDTLQGTVGAVSLIPDAL 88

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
            P         AF E+VH+ ++  I ++L 
Sbjct: 89  TPHEEAVYTNIAFMESVHAKSYSSIFSTLA 118


>gi|326782933|ref|YP_004323331.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-RSM4]
 gi|310004192|gb|ADO98586.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-RSM4]
          Length = 388

 Score = 42.7 bits (99), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 26/107 (24%), Positives = 54/107 (50%), Gaps = 3/107 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +Q D + +++   LT +++ +   NL +    +S+      +A   + S PE 
Sbjct: 59  WRPEEVSLQKDRSDYQT---LTPEQKHIFTSNLKYQIMLDSVQGRGPGMAFIPYCSLPEL 115

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKAN 160
              +    F E +HS ++ YII ++  D  E+F+   +  ++ ++A+
Sbjct: 116 EACMTVWEFMEMIHSRSYTYIIKNVYPDPSEVFDTILDDENVMSRAS 162


>gi|298256107|gb|ADI71332.1| ribonucleoside diphosphate reductase beta subunit-like protein
           [Rana esculenta virus]
          Length = 202

 Score = 42.7 bits (99), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 2/126 (1%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA          HW+ TE+ ++DD+  WKS   +T  E+  +   L  F   +  
Sbjct: 32  PFRYAWAEAIRTKHEKVHWVETEINLRDDVTDWKS-GVMTPGEKAFVSCVLRLFTQLDVE 90

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V    +  + +     E R  L   A  EA+H   +  +  +LG+ + E +  + +   +
Sbjct: 91  VGALYLDHLTQVFRCNEIRNMLTSFACREAIHQKAYSLLNDTLGMPDCE-YQAFADYEEM 149

Query: 156 TAKANW 161
           T K ++
Sbjct: 150 TDKLDF 155


>gi|225734460|gb|ACO25228.1| hypothetical protein [Epizootic haematopoietic necrosis virus]
          Length = 387

 Score = 42.7 bits (99), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 2/126 (1%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA +        HW+ TE+ ++DD+  WKS   +T  E+  +   L  F   +  
Sbjct: 75  PFRYAWAEDIRTKHEKVHWVETEINLRDDVTDWKS-GVMTPGEKAFVSCVLRLFTQLDVE 133

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V    +  + +     E R  L   A  EA+H   +  +  +LG+ + E +  + +   +
Sbjct: 134 VGALYLDHLAQVFRCNEIRNMLTSFACREAIHQKAYSLLNDTLGMPDCE-YQAFADYEEM 192

Query: 156 TAKANW 161
           T K ++
Sbjct: 193 TDKLDF 198


>gi|114766102|ref|ZP_01445111.1| ribonucleoside-diphosphate reductase, beta subunit protein
           [Pelagibaca bermudensis HTCC2601]
 gi|114541657|gb|EAU44698.1| ribonucleoside-diphosphate reductase, beta subunit protein
           [Roseovarius sp. HTCC2601]
          Length = 326

 Score = 42.7 bits (99), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 10/143 (6%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           N W+P +VP+ +D+  W +   LT++ER +  R        +++  +    A+      P
Sbjct: 36  NFWLPEKVPLSNDVQSWAT---LTEEERQLTIRVFTGLTLLDTIQNSVGAPAMMPDCLTP 92

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANWALQYTQTL 169
                L   AF EAVH+ ++  I ++L    +  E F    E P + AKA   L+     
Sbjct: 93  HEESVLTNIAFMEAVHARSYSSIFSTLCSTREVDEAFRWSDENPHLQAKARAVLETYAPE 152

Query: 170 SSPSFHYWNKRRRSRILTRSLRF 192
           + P      KR+ + +   S  F
Sbjct: 153 ADPL-----KRKIASVFLESFLF 170


>gi|218442220|ref|YP_002380549.1| ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 7424]
 gi|218174948|gb|ACK73681.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 7424]
          Length = 355

 Score = 42.7 bits (99), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 72/149 (48%), Gaps = 9/149 (6%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA-LWKSKNGLTDDERLMIKRNLG 87
           +++ QL  ++Y WA   Y     N W+P  + +  D+   W     LTD+ER      L 
Sbjct: 37  TNLMQLNDVRYNWAVGLYKQMRENFWIPERLDITQDVTDYW----NLTDEERYAFDGILS 92

Query: 88  FFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII-TSLGLDE-GEL 145
           +    +S+   NI   +   ++ PE    +  Q  +E +H+  +QY+I T + L++  ++
Sbjct: 93  YLTFLDSIQTCNIP-HLKSSVTAPEISLCMAEQISQEGMHNQAYQYMIETIIPLEKRNQV 151

Query: 146 FNMYREVPSITAKANW-ALQYTQTLSSPS 173
           ++ +R    + A+  + A  Y + + +PS
Sbjct: 152 YDFWRTDKVLKARCEFIAGLYQKYIDTPS 180


>gi|289551411|ref|YP_003472315.1| Ribonucleotide reductase of class Ib (aerobic), beta subunit
           [Staphylococcus lugdunensis HKU09-01]
 gi|289180942|gb|ADC88187.1| Ribonucleotide reductase of class Ib (aerobic), beta subunit
           [Staphylococcus lugdunensis HKU09-01]
          Length = 322

 Score = 42.7 bits (99), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 3/85 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W+ TE  +  D+A WK+   LTDDER   KR L      ++  A++ +  I  H ++   
Sbjct: 25  WVETEFKVSKDIASWKT---LTDDERNTFKRALAGLTGLDTHQADDGMPLIMLHTTDLRK 81

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSL 138
           +      A  E +H+ ++ +I T+L
Sbjct: 82  KAVYAFMAMMEQIHAKSYSHIFTTL 106


>gi|308067265|ref|YP_003868870.1| Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide
           reductase small subunit) [Paenibacillus polymyxa E681]
 gi|305856544|gb|ADM68332.1| Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide
           reductase small subunit) [Paenibacillus polymyxa E681]
          Length = 343

 Score = 42.4 bits (98), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 6/106 (5%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           NHW+P E+PM  D + +     L  +E+   K N+G  A  +S+     V  + R+ ++ 
Sbjct: 47  NHWIPDEIPMSKDASQFPV---LDAEEQRTFKINIGLLAVLDSM-QTMFVGDVKRYFTDS 102

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSLGLD--EGELFNMYREVPSI 155
                      +E VH+ ++ Y+++SL  D  + E+F  ++  P +
Sbjct: 103 SLEAISAIIGQQEVVHNQSYSYVLSSLVSDQEQKEIFEYWKNDPVL 148


>gi|319948549|ref|ZP_08022680.1| ribonucleotide-diphosphate reductase subunit beta [Dietzia cinnamea
           P4]
 gi|319437796|gb|EFV92785.1| ribonucleotide-diphosphate reductase subunit beta [Dietzia cinnamea
           P4]
          Length = 338

 Score = 42.4 bits (98), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 9/120 (7%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  W++   LT+ E+ M  R        +++      +++    S
Sbjct: 46  TTNFWLPEKVPVSNDIPSWQT---LTEYEQTMTARVFTGLTLLDTIQGTVGAVSMIPDAS 102

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL----GLDEGELFNMYREVPSITAKANWALQY 165
            P     L   AF E+VH+ ++  I ++L     +DE   F    E P +  KA   L Y
Sbjct: 103 TPHEEAVLTNIAFMESVHAKSYSTIFSTLCSTPQIDEA--FRWAEENPYLQRKAKIILGY 160


>gi|67921622|ref|ZP_00515140.1| Ribonucleoside-diphosphate reductase [Crocosphaera watsonii WH
           8501]
 gi|67856734|gb|EAM51975.1| Ribonucleoside-diphosphate reductase [Crocosphaera watsonii WH
           8501]
          Length = 321

 Score = 42.4 bits (98), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 4/102 (3%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           ++Y WA   Y     N W+P  + +  D+  +     LTDDER      L +    +S+ 
Sbjct: 11  VRYTWAVGLYQQMRENFWIPQRLDITQDVTDY---GNLTDDERYAYDGILSYLTFLDSVQ 67

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
             NI   +   ++ PE    +  Q  +E +H+ ++QY+I ++
Sbjct: 68  TCNIP-HLKTSITAPEISLCMAEQISQEGMHNQSYQYLIETI 108


>gi|172058301|ref|YP_001814761.1| ribonucleotide-diphosphate reductase subunit beta [Exiguobacterium
           sibiricum 255-15]
 gi|171990822|gb|ACB61744.1| Ribonucleoside-diphosphate reductase [Exiguobacterium sibiricum
           255-15]
          Length = 347

 Score = 42.0 bits (97), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 4/102 (3%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           + Y   +  Y    +N W+P E+ M  D+  W   N L++ E+   KR +G  +  +S V
Sbjct: 35  IAYPQFYSIYKQLLSNFWIPDEISMSKDMQQW---NQLSEREQDAFKRIIGLLSILDS-V 90

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
               +L      S+      L   A +E VH+ ++ Y+++SL
Sbjct: 91  QTRYILESAMFTSDASIHAILAIVAQQEVVHNQSYSYVLSSL 132


>gi|49237365|ref|YP_031646.1| ribonucleoside diphosphate reductase beta subunit-like protein
           [Frog virus 3]
 gi|47060183|gb|AAT09727.1| ribonucleoside diphosphate reductase beta subunit-like protein
           [Frog virus 3]
          Length = 387

 Score = 42.0 bits (97), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 2/126 (1%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA +        HW+ TE+ ++DD+  WKS   +T  E+  +   L  F   +  
Sbjct: 75  PFRYNWAEDIRTKHEKVHWVETEINLRDDVTDWKS-GVMTPGEKAFVSCVLRLFTQLDVE 133

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V    +  + +     E R  L   A  EA+H   +  +  +LG+ + E +  + +   +
Sbjct: 134 VGALYLDHLTQVFRCNEIRNMLTSFACREAIHQKAYSLLNDTLGMPDCE-YQAFADYGEM 192

Query: 156 TAKANW 161
           T K ++
Sbjct: 193 TDKLDF 198


>gi|315658919|ref|ZP_07911786.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           lugdunensis M23590]
 gi|315496043|gb|EFU84371.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           lugdunensis M23590]
          Length = 322

 Score = 42.0 bits (97), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 3/85 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W+ TE  +  D+A WK+   LTDDER   KR L      ++  A++ +  I  H ++   
Sbjct: 25  WVETEFKVSKDIASWKT---LTDDERNTFKRALAGLTGLDTHQADDGMPLIMLHTTDLRK 81

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSL 138
           +      A  E +H+ ++ +I T+L
Sbjct: 82  KAVYSFMAMMEQIHAKSYSHIFTTL 106


>gi|28377561|ref|NP_784453.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           plantarum WCFS1]
 gi|254555734|ref|YP_003062151.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           plantarum JDM1]
 gi|300769755|ref|ZP_07079637.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           plantarum subsp. plantarum ATCC 14917]
 gi|308179714|ref|YP_003923842.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           plantarum subsp. plantarum ST-III]
 gi|28270393|emb|CAD63296.1| ribonucleoside-diphosphate reductase, beta chain [Lactobacillus
           plantarum WCFS1]
 gi|254044661|gb|ACT61454.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           plantarum JDM1]
 gi|300492663|gb|EFK27849.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           plantarum subsp. plantarum ATCC 14917]
 gi|308045205|gb|ADN97748.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           plantarum subsp. plantarum ST-III]
          Length = 336

 Score = 42.0 bits (97), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 8/122 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +D+A W+    L DD R ++    G     ++L + + +
Sbjct: 33  TWEK---LTEQFWLDTRIPVSNDMADWRE---LDDDHRWVVGHVFGGLTLLDTLQSQDGL 86

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL-DE-GELFNMYREVPSITAKA 159
            A+ R++        L    F E+VH+ ++  I  +L   DE  E+F+       + AKA
Sbjct: 87  QALRRNVLTSHETAVLNNIQFMESVHAKSYSTIFETLNTPDEINEIFDWSDSEEFLQAKA 146

Query: 160 NW 161
            W
Sbjct: 147 QW 148


>gi|228861279|ref|YP_002854302.1| ribonucleotide reductase small subunit [Soft-shelled turtle
           iridovirus]
 gi|45550045|gb|AAS67856.1| ribonucleotide reductase small subunit [Rana grylio virus 9506]
 gi|194307559|gb|ACF42289.1| ribonucleotide reductase small subunit [Soft-shelled turtle
           iridovirus]
          Length = 387

 Score = 42.0 bits (97), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 2/126 (1%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA +        HW+ TE+ ++DD+  WKS   +T  E+  +   L  F   +  
Sbjct: 75  PFRYTWAEDIRTKHEKVHWVETEINLRDDVTDWKS-GVMTPGEKAFVSCVLRLFTQLDVE 133

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V    +  + +     E R  L   A  EA+H   +  +  +LG+ + E +  + +   +
Sbjct: 134 VGALYLDHLTQVFRCNEIRNMLTSFACREAIHQKAYSLLNDTLGMPDCE-YQAFADYGEM 192

Query: 156 TAKANW 161
           T K ++
Sbjct: 193 TDKLDF 198


>gi|170077010|ref|YP_001733648.1| ribonucleoside-diphosphate reductase, beta subunit [Synechococcus
           sp. PCC 7002]
 gi|169884679|gb|ACA98392.1| ribonucleoside-diphosphate reductase, beta subunit [Synechococcus
           sp. PCC 7002]
          Length = 352

 Score = 42.0 bits (97), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 4/110 (3%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
           +++ QL  ++Y WA   Y     N W+P ++ +  D+  +   + LTD ER      L +
Sbjct: 34  TNLMQLNDVRYPWAVGLYQQMRENFWIPQKLDITQDVTDY---HNLTDSERRAFDGILSY 90

Query: 89  FASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
               +S+   N+   I   ++ PE    +  Q  +E +H+ ++QY+I ++
Sbjct: 91  LTFLDSVQTCNLP-HIKSSITAPEISLCIAEQISQEGMHNQSYQYMIETI 139


>gi|240169547|ref|ZP_04748206.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium
           kansasii ATCC 12478]
          Length = 320

 Score = 42.0 bits (97), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 10/137 (7%)

Query: 32  NQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFAS 91
           N+L   K    W++      N W+P +VP+ +D+  W +   LT +E+ +  R       
Sbjct: 13  NRLQDEKDAEVWDRL---TGNFWLPEKVPVSNDIPSWGT---LTANEKQLTMRVFTGLTM 66

Query: 92  SESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR- 150
            +++      +++      P     L   AF E+VH+ ++  I ++L     E+ + +R 
Sbjct: 67  LDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTL-CSTAEIDDAFRW 125

Query: 151 --EVPSITAKANWALQY 165
             E P++  KA   LQY
Sbjct: 126 SEENPNLQRKAEIVLQY 142


>gi|18656506|gb|AAL77807.1|AF389451_14 ribonucleoside-diphosphate reductase beta subunit [Tiger frog
           virus]
          Length = 387

 Score = 42.0 bits (97), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 1/109 (0%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA +        HW+ TE+ ++DD+  WKS   +T  E+  +   L  F   +  
Sbjct: 75  PFRYTWAEDIRTKHEKVHWVETEINLRDDVTDWKS-GVMTPGEKAFVSCVLRLFTQLDVE 133

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE 144
           V    +  + +     E R  L   A  EA+H   +  +  +LG+ + E
Sbjct: 134 VGALYLDHLTQVFRCNEIRNMLTSFACREAIHQKAYSLLNDTLGMPDCE 182


>gi|312883652|ref|ZP_07743377.1| ribonucleoside-diphosphate reductase subunit beta [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309368875|gb|EFP96402.1| ribonucleoside-diphosphate reductase subunit beta [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 323

 Score = 41.6 bits (96), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 15/119 (12%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR---NLGFFASSESLVANNIVLAIYRHL 108
           N W+P ++P+ +D+  WK    LT+DE+++  R    L    + ++ V   +++   R  
Sbjct: 32  NFWLPEKIPLSNDIQSWKQ---LTEDEQVLTTRVFTGLTLLDTIQNTVGAPVLMKDAR-- 86

Query: 109 SNPECRQYLLRQAFEEAVHSHTFQYIITSL----GLDEGELFNMYREVPSITAKANWAL 163
             P     L   AF EAVH+ ++  I ++L     +DE   F    E P +  KA   L
Sbjct: 87  -TPHEEAVLSNIAFMEAVHARSYSSIFSTLCTTPQIDEA--FRWAEENPLLQQKAKIIL 142


>gi|45686047|ref|YP_003810.1| unknown [Ambystoma tigrinum virus]
 gi|37722471|gb|AAP33216.1| unknown [Ambystoma tigrinum stebbensi virus]
          Length = 387

 Score = 41.6 bits (96), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 2/126 (1%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA          HW+ TE+ ++DD+  WKS   +T  E+  +   L  F   +  
Sbjct: 75  PFRYAWAENIRTKHEKVHWVETEINLRDDVTDWKS-GVMTPGEKAFVSCVLRLFTQLDVE 133

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V    +  + +     E R  L   A  EA+H   +  +  +LG+ + E +  + +   +
Sbjct: 134 VGALYLDHLTQVFRCNEIRNMLTSFACREAIHQKAYSLLNDTLGMPDCE-YQAFADYEEM 192

Query: 156 TAKANW 161
           T K ++
Sbjct: 193 TDKLDF 198


>gi|307151334|ref|YP_003886718.1| ribonucleotide reductase [Cyanothece sp. PCC 7822]
 gi|306981562|gb|ADN13443.1| ribonucleotide reductase [Cyanothece sp. PCC 7822]
          Length = 355

 Score = 41.6 bits (96), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 76/168 (45%), Gaps = 9/168 (5%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA-LWKSKNGLTDDERLMIKRNLG 87
           +++ QL  ++Y WA   Y     N W+P  + +  D+   W     LT+DER   +  L 
Sbjct: 37  TNLMQLNDVRYTWAVGLYKQMRENFWIPERLDITQDVTDYW----NLTEDERYAFEGILS 92

Query: 88  FFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GEL 145
           +    +S+   NI   +   ++ PE    +  Q  +E +H+  +QY+I ++   E   E+
Sbjct: 93  YLTFLDSVQTCNIP-HLKASVTAPEISLCMAEQISQEGMHNQAYQYMIETIIPLERRSEV 151

Query: 146 FNMYREVPSITAKANW-ALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           ++ +R    + A+  + A  Y + ++ P+   +     +  L   L F
Sbjct: 152 YDFWRTDKVLKARCEFIAGLYQKYINQPNIDNYFTALMADYLLEGLYF 199


>gi|219556030|ref|ZP_03535106.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T17]
 gi|289568136|ref|ZP_06448363.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis T17]
 gi|289541889|gb|EFD45538.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis T17]
          Length = 210

 Score = 41.6 bits (96), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 11/110 (10%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
           LPLK       +       W P ++    D A W+    L+DDER    R    F + E 
Sbjct: 19  LPLKL------FAGGNAKFWDPADIDFTRDRADWEK---LSDDERDYATRLCTQFIAGEE 69

Query: 95  LVANNI--VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE 142
            V  +I   ++  R         YL + AFEEA H+  F+  + ++G+ E
Sbjct: 70  AVTEDIQPFMSAMRAEGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGISE 119


>gi|297582631|ref|YP_003698411.1| ribonucleoside-diphosphate reductase [Bacillus selenitireducens
           MLS10]
 gi|297141088|gb|ADH97845.1| Ribonucleoside-diphosphate reductase [Bacillus selenitireducens
           MLS10]
          Length = 347

 Score = 41.6 bits (96), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 4/102 (3%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           + Y   ++ Y +   N W   E+ MQDD+  W        D  L I   L    S ++  
Sbjct: 37  IAYPHMYDLYQTLLANFWKAQEINMQDDIKQWAELTPAEQDVFLRINTQLASLDSLQTPT 96

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            + ++     ++++P  +      A +EAVH+ ++ Y+++SL
Sbjct: 97  MSQVM----DYVTDPSFKAIFAIVAQQEAVHNESYSYVLSSL 134


>gi|289423472|ref|ZP_06425274.1| ribonucleoside-diphosphate reductase, beta subunit
           [Peptostreptococcus anaerobius 653-L]
 gi|289156106|gb|EFD04769.1| ribonucleoside-diphosphate reductase, beta subunit
           [Peptostreptococcus anaerobius 653-L]
          Length = 337

 Score = 41.6 bits (96), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 7/130 (5%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
               W+P EVP+  D+  W     LT+ ER++ KR L      ++   N+ + ++     
Sbjct: 41  VKQFWLPEEVPISKDIPSWAE---LTESERILYKRVLAGLTLLDTKQGNDGIPSMMDLTE 97

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY---REVPSITAKANWALQYT 166
           N + +  L      E +H+ ++  I T+L L + E+ +++    E P +  KA   L+  
Sbjct: 98  NFQRKAVLSFMGTMEEIHAKSYSSIFTTL-LSKHEIDDLFLWIEEEPLLQNKAKIVLRQY 156

Query: 167 QTLSSPSFHY 176
           + +  P   Y
Sbjct: 157 KNVEDPKSLY 166


>gi|328958552|ref|YP_004375938.1| ribonucleoside-diphosphate reductase subunit beta [Carnobacterium
           sp. 17-4]
 gi|328674876|gb|AEB30922.1| ribonucleoside-diphosphate reductase subunit beta [Carnobacterium
           sp. 17-4]
          Length = 318

 Score = 41.6 bits (96), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 6/98 (6%)

Query: 41  WAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNI 100
           + W+K   A +  W+ T VP+ +DLA W+    L+  E+ +IK+ +G  A  ++L +   
Sbjct: 20  YVWDK---ATSQFWLDTRVPISNDLADWRE---LSSVEQEVIKKVVGGLALLDTLQSEKG 73

Query: 101 VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           V A+   +   +    L    F E++H+ ++  I+TSL
Sbjct: 74  VNAMREDVRTHKEAAILNNFLFMESIHAKSYGTILTSL 111


>gi|315605404|ref|ZP_07880447.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces sp.
           oral taxon 180 str. F0310]
 gi|315312973|gb|EFU61047.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces sp.
           oral taxon 180 str. F0310]
          Length = 329

 Score = 41.6 bits (96), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 3/89 (3%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +DL  WK+   LT  E+LM  R        ++L      +++     
Sbjct: 37  TGNFWLPEKVPLSNDLPSWKT---LTKGEQLMTNRVFTGLTLLDTLQGTVGAVSLIPDAR 93

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            P         AF E+VH+ ++  I ++L
Sbjct: 94  TPHEEAVYTNIAFMESVHAKSYSSIFSTL 122


>gi|118470345|ref|YP_884771.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           smegmatis str. MC2 155]
 gi|238055307|sp|A0QPD3|RIR2H_MYCS2 RecName: Full=R2-like ligand binding oxidase; AltName:
           Full=Ribonucleotide reductase R2 subunit homolog;
           AltName: Full=Ribonucleotide reductase small subunit
           homolog
 gi|118171632|gb|ABK72528.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
           smegmatis str. MC2 155]
          Length = 320

 Score = 41.6 bits (96), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 12/122 (9%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
           LPLK       +       W P ++    D A W++   LT+ ER    R    F + E 
Sbjct: 19  LPLKL------FAGGNAKFWDPADIDFSRDRADWEA---LTEREREYATRLCAEFIAGEE 69

Query: 95  LVANNI--VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
            V  +I   ++  R         YL + AFEEA H+  F+  + ++G+ + +L ++  EV
Sbjct: 70  AVTKDIQPFMSAMRAEGRLGDEMYLTQFAFEEAKHTQVFRMWLDAVGVTD-DLHSLIEEV 128

Query: 153 PS 154
           P+
Sbjct: 129 PA 130


>gi|120404438|ref|YP_954267.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           vanbaalenii PYR-1]
 gi|238055311|sp|A1TAR1|RIR2H_MYCVP RecName: Full=R2-like ligand binding oxidase; AltName:
           Full=Ribonucleotide reductase R2 subunit homolog;
           AltName: Full=Ribonucleotide reductase small subunit
           homolog
 gi|119957256|gb|ABM14261.1| ribonucleotide reductase [Mycobacterium vanbaalenii PYR-1]
          Length = 312

 Score = 41.6 bits (96), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 6/103 (5%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNI--VLAIYRHLSNP 111
           W P ++    D A W+S   LTD ER    R    F + E  V  +I   +A  R     
Sbjct: 32  WDPADIDFSRDRADWES---LTDLERDWATRLCAEFIAGEEAVTQDIQPFMAAMRAEGRL 88

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPS 154
               YL + AFEEA H+  F+  + ++G+ E +L     E+P+
Sbjct: 89  GDEMYLTQFAFEEAKHTQVFRMWLDAVGITE-DLQGYLDELPA 130


>gi|269865992|ref|XP_002652118.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063125|gb|EED41939.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 134

 Score = 41.6 bits (96), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 3/68 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   WE Y    +  W   EV M  D   + +   LT +E+  IK  L FFA+S+
Sbjct: 38  IFPIQYPEIWEFYKMHESTFWTVEEVDMTFDCEHFST---LTPNEQFFIKYVLAFFAASD 94

Query: 94  SLVANNIV 101
            +V  N+V
Sbjct: 95  GIVNENLV 102


>gi|306806029|ref|ZP_07442697.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu007]
 gi|306970425|ref|ZP_07483086.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu009]
 gi|308347482|gb|EFP36333.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu007]
 gi|308352109|gb|EFP40960.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu009]
          Length = 323

 Score = 41.6 bits (96), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 11/110 (10%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
           LPLK       +       W P ++    D A W+    L+DDER    R    F + E 
Sbjct: 19  LPLKL------FAGGNAKFWDPADIDFTRDRADWEK---LSDDERDYATRLCTQFIAGEE 69

Query: 95  LVANNI--VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE 142
            V  +I   ++  R         YL + AFEEA H+  F+  + ++G+ E
Sbjct: 70  AVTEDIQPFMSAMRAEGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGISE 119


>gi|269864086|ref|XP_002651449.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220064500|gb|EED42605.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 130

 Score = 41.6 bits (96), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 3/68 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   WE Y    +  W   EV M  D   + +   LT +E+  IK  L FFA+S+
Sbjct: 38  IFPIQYPEIWEFYKMHESTFWTVEEVDMTFDCEHFST---LTPNEQFFIKYVLAFFAASD 94

Query: 94  SLVANNIV 101
            +V  N+V
Sbjct: 95  GIVNENLV 102


>gi|226438223|pdb|3EE4|A Chain A, R2-Like Ligand Binding MnFE OXIDASE FROM M. TUBERCULOSIS
          Length = 323

 Score = 41.6 bits (96), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 11/110 (10%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
           LPLK       +       W P ++    D A W+    L+DDER    R    F + E 
Sbjct: 28  LPLKL------FAGGNAKFWHPADIDFTRDRADWEK---LSDDERDYATRLCTQFIAGEE 78

Query: 95  LVANNI--VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE 142
            V  +I   ++  R         YL + AFEEA H+  F+  + ++G+ E
Sbjct: 79  AVTEDIQPFMSAMRAEGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGISE 128


>gi|114560571|ref|XP_513941.2| PREDICTED: hypothetical protein [Pan troglodytes]
          Length = 403

 Score = 41.6 bits (96), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 5/90 (5%)

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
           +E   I R L FFA+S+ +V  N+V    + +   E R +   Q   E  HS  +  +I 
Sbjct: 106 EESDFISRVLAFFAASDGIVNENLVERFSQEVQITEARCFYDFQIAMENTHSEMYSLLID 165

Query: 137 SLGLDEGE---LFNMYREVPSITAKANWAL 163
           +   D  E   LFN   E P +  KANWAL
Sbjct: 166 TYIKDSKEREFLFNTI-ETPCV-KKANWAL 193


>gi|238584957|ref|XP_002390722.1| hypothetical protein MPER_09958 [Moniliophthora perniciosa FA553]
 gi|215454468|gb|EEB91652.1| hypothetical protein MPER_09958 [Moniliophthora perniciosa FA553]
          Length = 155

 Score = 41.2 bits (95), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y   W+ Y  A  + W   E+ +  DL  W   N + D+ER  I   L FFA+S+
Sbjct: 85  LFPIQYPEIWQMYKKAEASFWTAEEMDLSKDLHDW--NNRMNDNERHFISHVLAFFAASD 142

Query: 94  SLVAN 98
            +  N
Sbjct: 143 GIHEN 147


>gi|15607374|ref|NP_214747.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis H37Rv]
 gi|148659997|ref|YP_001281520.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis H37Ra]
 gi|167968770|ref|ZP_02551047.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis H37Ra]
 gi|306774323|ref|ZP_07412660.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu001]
 gi|306974656|ref|ZP_07487317.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu010]
 gi|307082365|ref|ZP_07491535.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu011]
 gi|307082709|ref|ZP_07491822.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu012]
 gi|81556745|sp|P96416|RIR2H_MYCTU RecName: Full=R2-like ligand binding oxidase; AltName:
           Full=Ribonucleotide reductase R2 subunit homolog;
           AltName: Full=Ribonucleotide reductase small subunit
           homolog
 gi|238055310|sp|A5TYV8|RIR2H_MYCTA RecName: Full=R2-like ligand binding oxidase; AltName:
           Full=Ribonucleotide reductase R2 subunit homolog;
           AltName: Full=Ribonucleotide reductase small subunit
           homolog
 gi|1871607|emb|CAB07000.1| PROBABLE RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDB
           (RIBONUCLEOTIDE REDUCTASE SMALL CHAIN) [Mycobacterium
           tuberculosis H37Rv]
 gi|148504149|gb|ABQ71958.1| ribonucleoside-diphosphate reductase subunit beta NrdB
           [Mycobacterium tuberculosis H37Ra]
 gi|308217156|gb|EFO76555.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu001]
 gi|308356059|gb|EFP44910.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu010]
 gi|308360014|gb|EFP48865.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu011]
 gi|308367580|gb|EFP56431.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu012]
          Length = 314

 Score = 41.2 bits (95), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 11/110 (10%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
           LPLK       +       W P ++    D A W+    L+DDER    R    F + E 
Sbjct: 19  LPLKL------FAGGNAKFWHPADIDFTRDRADWEK---LSDDERDYATRLCTQFIAGEE 69

Query: 95  LVANNI--VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE 142
            V  +I   ++  R         YL + AFEEA H+  F+  + ++G+ E
Sbjct: 70  AVTEDIQPFMSAMRAEGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGISE 119


>gi|269862477|ref|XP_002650854.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220065515|gb|EED43201.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 122

 Score = 41.2 bits (95), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 3/68 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   WE Y    +  W   EV M  D   + +   LT +E+  IK  L FFA+S+
Sbjct: 38  IFPIQYPEIWEFYKMHESTFWTVEEVDMTFDCEHFST---LTPNEQFFIKYVLAFFAASD 94

Query: 94  SLVANNIV 101
            +V  N+V
Sbjct: 95  GIVNENLV 102


>gi|254992907|ref|ZP_05275097.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes FSL J2-064]
          Length = 229

 Score = 41.2 bits (95), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 26/124 (20%), Positives = 56/124 (45%), Gaps = 6/124 (4%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           + Y   +  Y     N+W+P EV M+ D    K    L++ E+      +G  A+ +S  
Sbjct: 39  IPYPSFYRAYKELSTNYWIPDEVDMKSDA---KQYPALSEQEKYAFDAIIGLLATLDS-P 94

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELFNMYREVPS 154
               +  I  ++++P         A +E +H+ ++ Y++ S+    ++  +F + R  P+
Sbjct: 95  QTRFIYNIAEYITDPAVHANAAIIAQQEVIHNESYSYVLASITNLQEQNRVFELARTHPT 154

Query: 155 ITAK 158
           I  +
Sbjct: 155 IIKR 158


>gi|269863385|ref|XP_002651202.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|269865188|ref|XP_002651836.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063788|gb|EED42221.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220064957|gb|EED42855.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 111

 Score = 41.2 bits (95), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 3/68 (4%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   WE Y    +  W   EV M  D   + +   LT +E+  IK  L FFA+S+
Sbjct: 38  IFPIQYPEIWEFYKMHESTFWTVEEVDMTFDCEHFST---LTPNEQFFIKYVLAFFAASD 94

Query: 94  SLVANNIV 101
            +V  N+V
Sbjct: 95  GIVNENLV 102


>gi|254549173|ref|ZP_05139620.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis '98-R604 INH-RIF-EM']
          Length = 311

 Score = 41.2 bits (95), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 11/110 (10%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
           LPLK       +       W P ++    D A W+    L+DDER    R    F + E 
Sbjct: 19  LPLKL------FAGGNAKFWDPADIDFTRDRADWEK---LSDDERDYATRLCTQFIAGEE 69

Query: 95  LVANNI--VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE 142
            V  +I   ++  R         YL + AFEEA H+  F+  + ++G+ E
Sbjct: 70  AVTEDIQPFMSAMRAEGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGISE 119


>gi|254489413|ref|ZP_05102616.1| ribonucleoside-diphosphate reductase, beta subunit [Roseobacter sp.
           GAI101]
 gi|214041920|gb|EEB82560.1| ribonucleoside-diphosphate reductase, beta subunit [Roseobacter sp.
           GAI101]
          Length = 324

 Score = 41.2 bits (95), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 10/143 (6%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           N W+P +VP+ +D+  W +   L  DER +  R L      +++       ++      P
Sbjct: 34  NFWLPEKVPLSNDVQSWAT---LKPDERTLTIRVLTGLTLLDTIQNTVGAPSLMPDAQTP 90

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANWALQYTQTL 169
                L   AF EAVH+ ++  I ++L    +  + F    + P + AK+   LQ     
Sbjct: 91  HEEAVLTNIAFMEAVHARSYSSIFSTLCSTKEVDDAFRWSEDNPHLQAKSRLILQEYNAT 150

Query: 170 SSPSFHYWNKRRRSRILTRSLRF 192
           + P      KR+ + +   S  F
Sbjct: 151 ADPL-----KRKIASVFLESFLF 168


>gi|254233615|ref|ZP_04926941.1| ribonucleoside-diphosphate reductase (beta chain) nrdB
           [Mycobacterium tuberculosis C]
 gi|124603408|gb|EAY61683.1| ribonucleoside-diphosphate reductase (beta chain) nrdB
           [Mycobacterium tuberculosis C]
          Length = 321

 Score = 41.2 bits (95), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 11/110 (10%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
           LPLK       +       W P ++    D A W+    L+DDER    R    F + E 
Sbjct: 19  LPLKL------FAGGNAKFWDPADIDFTRDRADWEK---LSDDERDYATRLCTQFIAGEE 69

Query: 95  LVANNI--VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE 142
            V  +I   ++  R         YL + AFEEA H+  F+  + ++G+ E
Sbjct: 70  AVTEDIQPFMSAMRAEGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGISE 119


>gi|310639978|ref|YP_003944736.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           polymyxa SC2]
 gi|309244928|gb|ADO54495.1| Ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           polymyxa SC2]
          Length = 343

 Score = 41.2 bits (95), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 6/106 (5%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           NHW+P E+PM  D + +     L  +E+   K N+G  A  +S+     V  + R+ ++ 
Sbjct: 47  NHWIPDEIPMSKDASQFPM---LDAEEQRTFKINIGLLAVLDSM-QTMFVGDVKRYFTDS 102

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSI 155
                      +E VH+ ++ Y+++SL    ++ E+F  ++  P +
Sbjct: 103 SLEAISAIIGQQEVVHNQSYSYVLSSLVSEQEQKEIFEYWKNDPVL 148


>gi|229916488|ref|YP_002885134.1| ribonucleotide-diphosphate reductase subunit beta [Exiguobacterium
           sp. AT1b]
 gi|229467917|gb|ACQ69689.1| Ribonucleoside-diphosphate reductase [Exiguobacterium sp. AT1b]
          Length = 346

 Score = 41.2 bits (95), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 34/159 (21%), Positives = 70/159 (44%), Gaps = 7/159 (4%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           + Y   +  Y    +N W+P E+ M  D+  W     LT+ E+   KR +G  +  +S V
Sbjct: 34  IAYPQFYTIYKQLLSNFWIPDEISMSKDMQQWPQ---LTEREQDAFKRIIGLLSILDS-V 89

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELFNMYREVPS 154
               +L      S+      L   A +E VH+ ++ Y+++SL    ++  +FN+ ++   
Sbjct: 90  QTRYILESSMFSSDSSVHAVLAVIAQQEVVHNQSYSYVLSSLVPLAEQNRIFNIAKDDEM 149

Query: 155 ITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           +  +  + L  Y     +P+   + K   + ++   + F
Sbjct: 150 VMKRNQFILDLYEAFRETPNAENFAKSLVASVILEGINF 188


>gi|260185097|ref|ZP_05762571.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis CPHL_A]
 gi|289445765|ref|ZP_06435509.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis CPHL_A]
 gi|289418723|gb|EFD15924.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis CPHL_A]
          Length = 314

 Score = 41.2 bits (95), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 11/110 (10%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
           LPLK       +       W P ++    D A W+    L+DDER    R    F + E 
Sbjct: 19  LPLKL------FAGGNAKFWDPADIDFTRDRADWEK---LSDDERDYATRLCTQFIAGEE 69

Query: 95  LVANNI--VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE 142
            V  +I   ++  R         YL + AFEEA H+  F+  + ++G+ E
Sbjct: 70  AVTEDIQPFMSAMRAEGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGISE 119


>gi|295395248|ref|ZP_06805456.1| ribonucleotide-diphosphate reductase subunit beta [Brevibacterium
           mcbrellneri ATCC 49030]
 gi|294972010|gb|EFG47877.1| ribonucleotide-diphosphate reductase subunit beta [Brevibacterium
           mcbrellneri ATCC 49030]
          Length = 324

 Score = 41.2 bits (95), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 3/87 (3%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           N W+P +VP+ +D+  W +   LTDDE+L+  R        +++      +++      P
Sbjct: 34  NFWLPEKVPLSNDVQSWAT---LTDDEKLLTMRVFTGLTLLDTIQGTVGAVSLIPDALTP 90

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSL 138
                    AF E+VH+ ++  I ++L
Sbjct: 91  HEEAVYTNIAFMESVHAKSYSSIFSTL 117


>gi|15839613|ref|NP_334650.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis CDC1551]
 gi|31791410|ref|NP_853903.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           bovis AF2122/97]
 gi|121636145|ref|YP_976368.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           bovis BCG str. Pasteur 1173P2]
 gi|148821426|ref|YP_001286180.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis F11]
 gi|215406230|ref|ZP_03418411.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 02_1987]
 gi|215414101|ref|ZP_03422758.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 94_M4241A]
 gi|215425440|ref|ZP_03423359.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T92]
 gi|215433154|ref|ZP_03431073.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis EAS054]
 gi|215448517|ref|ZP_03435269.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T85]
 gi|218755972|ref|ZP_03534768.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis GM 1503]
 gi|224988618|ref|YP_002643305.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium
           bovis BCG str. Tokyo 172]
 gi|253797156|ref|YP_003030157.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis KZN 1435]
 gi|260199231|ref|ZP_05766722.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T46]
 gi|260203377|ref|ZP_05770868.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis K85]
 gi|289441609|ref|ZP_06431353.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis T46]
 gi|289552485|ref|ZP_06441695.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis KZN 605]
 gi|289572811|ref|ZP_06453038.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis K85]
 gi|289748002|ref|ZP_06507380.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 02_1987]
 gi|289748709|ref|ZP_06508087.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis T92]
 gi|289756298|ref|ZP_06515676.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis EAS054]
 gi|289760339|ref|ZP_06519717.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T85]
 gi|289764349|ref|ZP_06523727.1| ribonucleoside-diphosphate reductase (beta chain) nrdB
           [Mycobacterium tuberculosis GM 1503]
 gi|297632713|ref|ZP_06950493.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis KZN 4207]
 gi|297729687|ref|ZP_06958805.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis KZN R506]
 gi|298527626|ref|ZP_07015035.1| ribonucleoside-diphosphate reductase (beta chain) nrdB
           [Mycobacterium tuberculosis 94_M4241A]
 gi|306779065|ref|ZP_07417402.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu002]
 gi|306782854|ref|ZP_07421176.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu003]
 gi|306787222|ref|ZP_07425544.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu004]
 gi|306791778|ref|ZP_07430080.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu005]
 gi|306801818|ref|ZP_07438486.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu008]
 gi|313657013|ref|ZP_07813893.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis KZN V2475]
 gi|81422934|sp|Q7U2I1|RIR2H_MYCBO RecName: Full=R2-like ligand binding oxidase; AltName:
           Full=Ribonucleotide reductase R2 subunit homolog;
           AltName: Full=Ribonucleotide reductase small subunit
           homolog
 gi|238055305|sp|A1KF53|RIR2H_MYCBP RecName: Full=R2-like ligand binding oxidase; AltName:
           Full=Ribonucleotide reductase R2 subunit homolog;
           AltName: Full=Ribonucleotide reductase small subunit
           homolog
 gi|13879730|gb|AAK44464.1| ribonucleoside-diphosphate reductase, beta subunit, putative
           [Mycobacterium tuberculosis CDC1551]
 gi|31616995|emb|CAD93102.1| PROBABLE RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDB
           (RIBONUCLEOTIDE REDUCTASE SMALL CHAIN) [Mycobacterium
           bovis AF2122/97]
 gi|121491792|emb|CAL70254.1| Probable ribonucleoside-diphosphate reductase (beta chain) nrdB
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148719953|gb|ABR04578.1| ribonucleoside-diphosphate reductase beta subunit nrdB
           [Mycobacterium tuberculosis F11]
 gi|224771731|dbj|BAH24537.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium
           bovis BCG str. Tokyo 172]
 gi|253318659|gb|ACT23262.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis KZN 1435]
 gi|289414528|gb|EFD11768.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis T46]
 gi|289437117|gb|EFD19610.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis KZN 605]
 gi|289537242|gb|EFD41820.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis K85]
 gi|289688530|gb|EFD56018.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 02_1987]
 gi|289689296|gb|EFD56725.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis T92]
 gi|289696885|gb|EFD64314.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis EAS054]
 gi|289711855|gb|EFD75871.1| ribonucleoside-diphosphate reductase (beta chain) nrdB
           [Mycobacterium tuberculosis GM 1503]
 gi|289715903|gb|EFD79915.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T85]
 gi|298497420|gb|EFI32714.1| ribonucleoside-diphosphate reductase (beta chain) nrdB
           [Mycobacterium tuberculosis 94_M4241A]
 gi|308327916|gb|EFP16767.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu002]
 gi|308332374|gb|EFP21225.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu003]
 gi|308336125|gb|EFP24976.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu004]
 gi|308339757|gb|EFP28608.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu005]
 gi|308351381|gb|EFP40232.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu008]
 gi|323717223|gb|EGB26432.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis CDC1551A]
 gi|326905988|gb|EGE52921.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis W-148]
 gi|328456943|gb|AEB02366.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis KZN 4207]
          Length = 314

 Score = 41.2 bits (95), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 11/110 (10%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
           LPLK       +       W P ++    D A W+    L+DDER    R    F + E 
Sbjct: 19  LPLKL------FAGGNAKFWDPADIDFTRDRADWEK---LSDDERDYATRLCTQFIAGEE 69

Query: 95  LVANNI--VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE 142
            V  +I   ++  R         YL + AFEEA H+  F+  + ++G+ E
Sbjct: 70  AVTEDIQPFMSAMRAEGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGISE 119


>gi|297570727|ref|YP_003696501.1| ribonucleoside-diphosphate reductase [Arcanobacterium haemolyticum
           DSM 20595]
 gi|296931074|gb|ADH91882.1| Ribonucleoside-diphosphate reductase [Arcanobacterium haemolyticum
           DSM 20595]
          Length = 324

 Score = 41.2 bits (95), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 58/136 (42%), Gaps = 8/136 (5%)

Query: 32  NQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFAS 91
           N+++  K    W++      N W+P ++P+ +D+  W   N L   E+LM  R       
Sbjct: 17  NKIIDEKDQEVWDRL---TGNFWLPEKIPLSNDIQSW---NTLKPHEQLMTTRVFTGLTL 70

Query: 92  SESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMY 149
            +++      +++      P     L   AF E+VH+ ++  I ++L    +  E F   
Sbjct: 71  LDTVQGTVGAISLIPDAITPHEEAVLTNIAFMESVHAKSYSSIFSTLISSQEIEETFRWS 130

Query: 150 REVPSITAKANWALQY 165
            E P +  KA   L Y
Sbjct: 131 EENPYLQKKAQIVLDY 146


>gi|304406354|ref|ZP_07388010.1| Ribonucleoside-diphosphate reductase [Paenibacillus curdlanolyticus
           YK9]
 gi|304344412|gb|EFM10250.1| Ribonucleoside-diphosphate reductase [Paenibacillus curdlanolyticus
           YK9]
          Length = 318

 Score = 40.8 bits (94), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 28/125 (22%), Positives = 52/125 (41%), Gaps = 5/125 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W   E+P+ DD   W     L+D +R +  + LG     +++     +  I  H+   + 
Sbjct: 28  WTDEEIPLSDDKMSWIE---LSDAQRELYMKVLGGLTLLDTIQGGVGIPKIVEHVDGLQR 84

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSS 171
           +  L      E +H+ ++  I T+L   E    +F   +  P +  KA W   Y   +++
Sbjct: 85  KAVLSFMGMMEQIHAKSYSSIFTTLASTEEIDGVFAWVKTQPQLQNKAEWISVYYNNITT 144

Query: 172 PSFHY 176
           P   Y
Sbjct: 145 PKSLY 149


>gi|326783480|ref|YP_004324017.1| ribonucleotide reductase A subunit [Synechococcus phage Syn19]
 gi|310004983|gb|ADO99373.1| ribonucleotide reductase A subunit [Synechococcus phage Syn19]
          Length = 388

 Score = 40.8 bits (94), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 24/107 (22%), Positives = 55/107 (51%), Gaps = 3/107 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +Q D + +++   L++ ++ +   NL +    +S+      +A   + S PE 
Sbjct: 59  WRPEEVSLQKDRSDYQT---LSEQQKHIFTSNLKYQIMLDSVQGRGPGMAFIPYCSLPEL 115

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKAN 160
              +    F E +HS ++ YII ++  + G++F+   +  ++ ++A+
Sbjct: 116 EACMTVWEFMEMIHSRSYTYIIKNVYSNPGDVFDTILDDENVMSRAS 162


>gi|306795820|ref|ZP_07434122.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu006]
 gi|308343762|gb|EFP32613.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu006]
          Length = 314

 Score = 40.8 bits (94), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 11/110 (10%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
           LPLK       +       W P ++    D A W+    L+DDER    R    F + E 
Sbjct: 19  LPLKL------FAGGNAKFWDPADIDFTRDRADWEK---LSDDERDYATRLCTQFIAGEE 69

Query: 95  LVANNI--VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE 142
            V  +I   ++  R         YL + AFEEA H+  F+  + ++G+ E
Sbjct: 70  AVTEDIQPFMSAMRAEGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGISE 119


>gi|294994707|ref|ZP_06800398.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 210]
          Length = 317

 Score = 40.8 bits (94), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 11/110 (10%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
           LPLK       +       W P ++    D A W+    L+DDER    R    F + E 
Sbjct: 19  LPLKL------FAGGNAKFWDPADIDFTRDRADWEK---LSDDERDYATRLCTQFIAGEE 69

Query: 95  LVANNI--VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE 142
            V  +I   ++  R         YL + AFEEA H+  F+  + ++G+ E
Sbjct: 70  AVTEDIQPFMSAMRAEGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGISE 119


>gi|227876446|ref|ZP_03994558.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           mulieris ATCC 35243]
 gi|269976014|ref|ZP_06183018.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus
           mulieris 28-1]
 gi|306817405|ref|ZP_07451150.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           mulieris ATCC 35239]
 gi|307700420|ref|ZP_07637459.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus
           mulieris FB024-16]
 gi|227842987|gb|EEJ53184.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           mulieris ATCC 35243]
 gi|269935842|gb|EEZ92372.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus
           mulieris 28-1]
 gi|304649846|gb|EFM47126.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           mulieris ATCC 35239]
 gi|307614405|gb|EFN93635.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus
           mulieris FB024-16]
          Length = 322

 Score = 40.8 bits (94), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 3/89 (3%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P ++P+ +D+  WK+ N    DE+LM  R        +++      +++     
Sbjct: 30  TGNFWLPEKIPLSNDIPSWKTLNA---DEKLMTNRVFTGLTLLDTIQGTVGAVSLIPDSR 86

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            P         AF E+VH+ ++  I ++L
Sbjct: 87  TPHEEAVYTNIAFMESVHAKSYSSIFSTL 115


>gi|260904342|ref|ZP_05912664.1| ribonucleotide-diphosphate reductase subunit beta [Brevibacterium
           linens BL2]
          Length = 326

 Score = 40.8 bits (94), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 9/120 (7%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  W +   LT++E+ +  R        +++      +++     
Sbjct: 34  TGNFWLPEKVPLSNDIPSWAT---LTEEEKTLTMRVFTGLTLLDTIQGTVGAISLIPDAV 90

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL----GLDEGELFNMYREVPSITAKANWALQY 165
            P     +   AF E+VH+ ++  I ++L     +DE   F   RE   + +KA+  L Y
Sbjct: 91  TPHEEAVMTNIAFMESVHAKSYSSIFSTLCSTKEIDEA--FRWSRENTYLQSKADIILSY 148


>gi|183599610|ref|ZP_02961103.1| hypothetical protein PROSTU_03095 [Providencia stuartii ATCC 25827]
 gi|188021860|gb|EDU59900.1| hypothetical protein PROSTU_03095 [Providencia stuartii ATCC 25827]
          Length = 378

 Score = 40.4 bits (93), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 3/123 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   NGL D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 51  WRPEEVDVSRDRIDY---NGLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPEL 107

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
             ++   +F E +HS ++ +II ++  D   +F+   E   I  +A     Y  TL   +
Sbjct: 108 ETWVETWSFSETIHSRSYTHIIRNIVNDPAIIFDDIVENEEILKRARDISAYYDTLIEMT 167

Query: 174 FHY 176
            +Y
Sbjct: 168 NYY 170


>gi|255026984|ref|ZP_05298970.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes FSL J2-003]
          Length = 336

 Score = 40.4 bits (93), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 26/124 (20%), Positives = 56/124 (45%), Gaps = 6/124 (4%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           + Y   +  Y     N+W+P EV M+ D    K    L++ E+      +G  A+ +S  
Sbjct: 39  IPYPSFYRAYKELSTNYWIPDEVDMKSDA---KQYPALSEQEKYAFDAIIGLLATLDS-P 94

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELFNMYREVPS 154
               +  I  ++++P         A +E +H+ ++ Y++ S+    ++  +F + R  P+
Sbjct: 95  QTRFIYNIAEYITDPAVHANAAIIAQQEVIHNESYSYVLASITNLQEQNRVFELARTHPT 154

Query: 155 ITAK 158
           I  +
Sbjct: 155 IIKR 158


>gi|313622843|gb|EFR93161.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           innocua FSL J1-023]
          Length = 349

 Score = 40.4 bits (93), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 26/124 (20%), Positives = 56/124 (45%), Gaps = 6/124 (4%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           + Y   +  Y     N+W+P EV M+ D    K    L++ E+      +G  A+ +S  
Sbjct: 39  IPYPSFYRAYKELSTNYWIPDEVDMKSDA---KQYPALSEQEKYAFDAIIGLLATLDS-P 94

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELFNMYREVPS 154
               +  I  ++++P         A +E +H+ ++ Y++ S+    ++  +F + R  P+
Sbjct: 95  QTRFIYNIAEYITDPAVHANAAIIAQQEVIHNESYSYVLASITNLQEQNRVFELARTHPT 154

Query: 155 ITAK 158
           I  +
Sbjct: 155 IIKR 158


>gi|16801322|ref|NP_471590.1| ribonucleotide-diphosphate reductase subunit beta [Listeria innocua
           Clip11262]
 gi|16414770|emb|CAC97486.1| lin2258 [Listeria innocua Clip11262]
          Length = 349

 Score = 40.4 bits (93), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 26/124 (20%), Positives = 56/124 (45%), Gaps = 6/124 (4%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           + Y   +  Y     N+W+P EV M+ D    K    L++ E+      +G  A+ +S  
Sbjct: 39  IPYPSFYRAYKELSTNYWIPDEVDMKSDA---KQYPALSEQEKYAFDAIIGLLATLDS-P 94

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELFNMYREVPS 154
               +  I  ++++P         A +E +H+ ++ Y++ S+    ++  +F + R  P+
Sbjct: 95  QTRFIYNIAEYITDPAVHANAAIIAQQEVIHNESYSYVLASITNLQEQNRVFELARTHPT 154

Query: 155 ITAK 158
           I  +
Sbjct: 155 IIKR 158


>gi|46908387|ref|YP_014776.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes str. 4b F2365]
 gi|47091823|ref|ZP_00229618.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes str. 4b H7858]
 gi|226224761|ref|YP_002758868.1| ribonucleoside-diphosphate reductase, subunit beta [Listeria
           monocytogenes Clip81459]
 gi|254825283|ref|ZP_05230284.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL J1-194]
 gi|254853280|ref|ZP_05242628.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL R2-503]
 gi|254931734|ref|ZP_05265093.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes HPB2262]
 gi|255519998|ref|ZP_05387235.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes FSL J1-175]
 gi|300764038|ref|ZP_07074034.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes FSL N1-017]
 gi|46881658|gb|AAT04953.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|47019834|gb|EAL10572.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes str. 4b H7858]
 gi|225877223|emb|CAS05937.1| Putative ribonucleoside-diphosphate reductase, subunit beta
           [Listeria monocytogenes serotype 4b str. CLIP 80459]
 gi|258606640|gb|EEW19248.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL R2-503]
 gi|293583289|gb|EFF95321.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes HPB2262]
 gi|293594529|gb|EFG02290.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL J1-194]
 gi|300515379|gb|EFK42430.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes FSL N1-017]
 gi|313617790|gb|EFR90013.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           innocua FSL S4-378]
 gi|328465961|gb|EGF37142.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 1816]
 gi|328472177|gb|EGF43048.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 220]
          Length = 349

 Score = 40.4 bits (93), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 26/124 (20%), Positives = 56/124 (45%), Gaps = 6/124 (4%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           + Y   +  Y     N+W+P EV M+ D    K    L++ E+      +G  A+ +S  
Sbjct: 39  IPYPSFYRAYKELSTNYWIPDEVDMKSDA---KQYPALSEQEKYAFDAIIGLLATLDS-P 94

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELFNMYREVPS 154
               +  I  ++++P         A +E +H+ ++ Y++ S+    ++  +F + R  P+
Sbjct: 95  QTRFIYNIAEYITDPAVHANAAIIAQQEVIHNESYSYVLASITNLQEQNRVFELARTHPT 154

Query: 155 ITAK 158
           I  +
Sbjct: 155 IIKR 158


>gi|296169397|ref|ZP_06851020.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           parascrofulaceum ATCC BAA-614]
 gi|295895947|gb|EFG75639.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           parascrofulaceum ATCC BAA-614]
          Length = 313

 Score = 40.4 bits (93), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 6/103 (5%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNI--VLAIYRHLSNP 111
           W P  +    D A W++   L+D ER+ + R    F + E  V  +I   +A  R     
Sbjct: 32  WDPANIDFSRDSADWEA---LSDRERVYVTRLCAGFIAGEEAVTQDIQPFMAAMRAEGRL 88

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPS 154
               YL + AFEEA H+  F+  + ++G+ + +L +   + P+
Sbjct: 89  GDEMYLTQFAFEEAKHTQAFRLWLDAVGVRD-DLHSFLDQTPA 130


>gi|219883069|ref|YP_002478233.1| Ribonucleoside-diphosphate reductase [Arthrobacter chlorophenolicus
           A6]
 gi|219862075|gb|ACL42416.1| Ribonucleoside-diphosphate reductase [Arthrobacter chlorophenolicus
           A6]
          Length = 326

 Score = 40.4 bits (93), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 9/122 (7%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
            NN W+P ++P+ +D+  W +   LT +E+L+  R        +++      +++     
Sbjct: 32  VNNFWLPEKIPLSNDVQSWAT---LTPEEQLLTMRVFTGLTLLDTIQGTVGAVSLIPDAI 88

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL----GLDEGELFNMYREVPSITAKANWALQY 165
            P     L   AF E+VH+ ++  I ++L     +DE   F    E   +  KA   + Y
Sbjct: 89  TPHEEAVLTNIAFMESVHAKSYSSIFSTLCSTKEIDEA--FRWSEENVHLQKKAQIVMDY 146

Query: 166 TQ 167
            Q
Sbjct: 147 YQ 148


>gi|16804193|ref|NP_465678.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes EGD-e]
 gi|116873587|ref|YP_850368.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           welshimeri serovar 6b str. SLCC5334]
 gi|217963685|ref|YP_002349363.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes HCC23]
 gi|224500181|ref|ZP_03668530.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes Finland 1988]
 gi|224501047|ref|ZP_03669354.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes FSL R2-561]
 gi|254826956|ref|ZP_05231643.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL N3-165]
 gi|254831409|ref|ZP_05236064.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 10403S]
 gi|255028522|ref|ZP_05300473.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes LO28]
 gi|284802601|ref|YP_003414466.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 08-5578]
 gi|284995743|ref|YP_003417511.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 08-5923]
 gi|290893101|ref|ZP_06556089.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL J2-071]
 gi|16411624|emb|CAD00232.1| lmo2154 [Listeria monocytogenes EGD-e]
 gi|116742465|emb|CAK21589.1| ribonucleoside-diphosphate reductase beta chain [Listeria
           welshimeri serovar 6b str. SLCC5334]
 gi|217332955|gb|ACK38749.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes HCC23]
 gi|258599337|gb|EEW12662.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL N3-165]
 gi|284058163|gb|ADB69104.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 08-5578]
 gi|284061210|gb|ADB72149.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 08-5923]
 gi|290557263|gb|EFD90789.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL J2-071]
 gi|307571740|emb|CAR84919.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes L99]
          Length = 349

 Score = 40.4 bits (93), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 26/124 (20%), Positives = 56/124 (45%), Gaps = 6/124 (4%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           + Y   +  Y     N+W+P EV M+ D    K    L++ E+      +G  A+ +S  
Sbjct: 39  IPYPSFYRAYKELSTNYWIPDEVDMKSDA---KQYPALSEQEKYAFDAIIGLLATLDS-P 94

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELFNMYREVPS 154
               +  I  ++++P         A +E +H+ ++ Y++ S+    ++  +F + R  P+
Sbjct: 95  QTRFIYNIAEYITDPAVHANAAIIAQQEVIHNESYSYVLASITNLQEQNRVFELARTHPT 154

Query: 155 ITAK 158
           I  +
Sbjct: 155 IIKR 158


>gi|47095728|ref|ZP_00233334.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes str. 1/2a F6854]
 gi|254899145|ref|ZP_05259069.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes J0161]
 gi|254912714|ref|ZP_05262726.1| ribonucleoside-diphosphate reductase [Listeria monocytogenes J2818]
 gi|254937041|ref|ZP_05268738.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes F6900]
 gi|47015871|gb|EAL06798.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes str. 1/2a F6854]
 gi|258609644|gb|EEW22252.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes F6900]
 gi|293590709|gb|EFF99043.1| ribonucleoside-diphosphate reductase [Listeria monocytogenes J2818]
          Length = 349

 Score = 40.4 bits (93), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 25/124 (20%), Positives = 57/124 (45%), Gaps = 6/124 (4%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           + Y   +  Y     N+W+P EV M+ D   + +   L++ E+      +G  A+ +S  
Sbjct: 39  IPYPSFYRAYKELSTNYWIPDEVDMKSDAKQYPT---LSEQEKYAFDAIIGLLATLDS-P 94

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELFNMYREVPS 154
               +  I  ++++P         A +E +H+ ++ Y++ S+    ++  +F + R  P+
Sbjct: 95  QTRFIYNIAEYITDPAVHANAAIIAQQEVIHNESYSYVLASITNLQEQNRVFELARTHPT 154

Query: 155 ITAK 158
           I  +
Sbjct: 155 IIKR 158


>gi|254976540|ref|ZP_05273012.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile QCD-66c26]
 gi|255093925|ref|ZP_05323403.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile CIP 107932]
 gi|255315677|ref|ZP_05357260.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile QCD-76w55]
 gi|255518338|ref|ZP_05386014.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile QCD-97b34]
 gi|255651455|ref|ZP_05398357.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile QCD-37x79]
 gi|260684515|ref|YP_003215800.1| ribonucleoside-diphosphate reductase subunit beta [Clostridium
           difficile CD196]
 gi|260688173|ref|YP_003219307.1| ribonucleoside-diphosphate reductase subunit beta [Clostridium
           difficile R20291]
 gi|260210678|emb|CBA65434.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile CD196]
 gi|260214190|emb|CBE06438.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile R20291]
          Length = 323

 Score = 40.4 bits (93), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 6/125 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W+P E+ +  D+ +W   N L++ E+ + K+ LG     ++   NN + ++     N + 
Sbjct: 34  WLPEEISVSKDIKVW---NELSNKEKELYKKVLGGLTLLDTKQGNNGIPSMMSLTENLQR 90

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANWAL-QYTQTLS 170
           +  L      E +H+ ++  I  +L   L+  ELF      P++  KA+  L QY  T +
Sbjct: 91  KAVLSFMGTMEEIHAKSYSSIFMTLLSNLEIDELFEWIETEPTLQRKADLVLAQYENTTN 150

Query: 171 SPSFH 175
               +
Sbjct: 151 QEGLY 155


>gi|315304277|ref|ZP_07874626.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           ivanovii FSL F6-596]
 gi|313627356|gb|EFR96140.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           ivanovii FSL F6-596]
          Length = 349

 Score = 40.4 bits (93), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 26/124 (20%), Positives = 56/124 (45%), Gaps = 6/124 (4%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           + Y   +  Y     N+W+P EV M+ D    K    L++ E+      +G  A+ +S  
Sbjct: 39  IPYPSFYRAYKELSTNYWIPDEVDMKSDA---KQYPALSEQEKYAFDAIIGLLATLDS-P 94

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELFNMYREVPS 154
               +  I  ++++P         A +E +H+ ++ Y++ S+    ++  +F + R  P+
Sbjct: 95  QTRFIYNIAEYITDPAVHANAAIIAQQEVIHNESYSYVLASITNLQEQNRVFELARTHPT 154

Query: 155 ITAK 158
           I  +
Sbjct: 155 IIKR 158


>gi|157135887|ref|XP_001663605.1| hypothetical protein AaeL_AAEL013412 [Aedes aegypti]
 gi|108870103|gb|EAT34328.1| conserved hypothetical protein [Aedes aegypti]
          Length = 244

 Score = 40.4 bits (93), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 48/106 (45%), Gaps = 8/106 (7%)

Query: 58  EVPMQDDLALW-KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQY 116
           EV +  DLA W K K+G    E+  I   L FF +S+  +  N+V    + L   E R +
Sbjct: 142 EVDLSKDLADWEKLKSG----EKHFISHVLAFFVASDGSMNENLVERFSQELQVTEARCF 197

Query: 117 LLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKA 159
              Q   E VHS  +  +I +   D  +   LFN    +P +  KA
Sbjct: 198 YGFQIAMENVHSEMYSLLIDTYIRDSKQREYLFNAIDNLPCVKKKA 243


>gi|126700615|ref|YP_001089512.1| ribonucleoside-diphosphate reductase subunit beta [Clostridium
           difficile 630]
 gi|255102106|ref|ZP_05331083.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile QCD-63q42]
 gi|255307975|ref|ZP_05352146.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile ATCC 43255]
 gi|115252052|emb|CAJ69888.1| Ribonucleoside-diphosphate reductase subunit beta (Ribonucleotide
           reductase small subunit) [Clostridium difficile]
          Length = 323

 Score = 40.4 bits (93), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 6/125 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W+P E+ +  D+ +W   N L++ E+ + K+ LG     ++   NN + ++     N + 
Sbjct: 34  WLPEEISVSKDIKVW---NELSNKEKELYKKVLGGLTLLDTKQGNNGIPSMMSLTENLQR 90

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANWAL-QYTQTLS 170
           +  L      E +H+ ++  I  +L   L+  ELF      P++  KA+  L QY  T +
Sbjct: 91  KAVLSFMGTMEEIHAKSYSSIFMTLLSNLEIDELFEWIETEPTLQRKADLVLAQYENTTN 150

Query: 171 SPSFH 175
               +
Sbjct: 151 QEGLY 155


>gi|326782198|ref|YP_004322599.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-HM1]
 gi|310004405|gb|ADO98798.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-HM1]
          Length = 395

 Score = 40.4 bits (93), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 3/106 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +Q D + +K+   LT +++ +   NL +    +S+      +A   + S PE 
Sbjct: 66  WRPEEVSLQKDRSDYKT---LTPEQKHIYTSNLKYQIMLDSVQGRGPGMAFMPYCSLPEL 122

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKA 159
              +      E +HS ++ YII ++  D  E+F+   +   I ++A
Sbjct: 123 ESAMNVWQLMEMIHSRSYTYIIKNVYPDASEVFDTVLDDDKIMSRA 168


>gi|299822182|ref|ZP_07054068.1| ribonucleotide-diphosphate reductase subunit beta [Listeria grayi
           DSM 20601]
 gi|299815711|gb|EFI82949.1| ribonucleotide-diphosphate reductase subunit beta [Listeria grayi
           DSM 20601]
          Length = 349

 Score = 40.0 bits (92), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 25/124 (20%), Positives = 57/124 (45%), Gaps = 6/124 (4%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           + Y   +  Y     N+W+P EV M+ D   +     L+++ER      +G  A+ +S  
Sbjct: 39  IPYPSFYRAYKELSTNYWIPDEVDMKGDAKQYPE---LSEEERYAYDAIIGLLATLDS-P 94

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELFNMYREVPS 154
               +  +  ++++P         A +E +H+ ++ Y++ S+    ++  +F + R  P+
Sbjct: 95  QTRFIYNVAEYVTDPAVHANAAIIAQQEVIHNESYSYVLASITNLQNQNRIFELARTHPT 154

Query: 155 ITAK 158
           I  +
Sbjct: 155 IIKR 158


>gi|218709884|ref|YP_002417505.1| ribonucleoside-diphosphate reductase subunit beta [Vibrio
           splendidus LGP32]
 gi|218322903|emb|CAV19080.1| Ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           splendidus LGP32]
          Length = 323

 Score = 40.0 bits (92), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 9/116 (7%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           N W+P +VP+ +D+  WK    LT++E+ +  R        +++       A+      P
Sbjct: 32  NFWLPEKVPLSNDIQTWKQ---LTEEEQTLTIRVFTGLTLLDTIQNTVGAPALMEDARTP 88

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSL----GLDEGELFNMYREVPSITAKANWAL 163
                L   AF EAVH+ ++  + ++L     +DE   F   +E P +  KA   L
Sbjct: 89  HEEAVLTNIAFMEAVHARSYSSVFSTLCTTPQIDEA--FRWAQENPLLQKKAQIVL 142


>gi|254505962|ref|ZP_05118107.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus 16]
 gi|219551185|gb|EED28165.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus 16]
          Length = 323

 Score = 40.0 bits (92), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 15/120 (12%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR---NLGFFASSESLVANNIVLAIYRHL 108
           N W+P +VP+ +D+  WK    LT +E+ +  R    L    + ++ V    ++A  R  
Sbjct: 32  NFWLPEKVPLSNDIQTWKQ---LTQEEQTLTIRVFTGLTLLDTIQNTVGAPALMADAR-- 86

Query: 109 SNPECRQYLLRQAFEEAVHSHTFQYIITSL----GLDEGELFNMYREVPSITAKANWALQ 164
             P     L   AF EAVH+ ++  + ++L     +DE   F    E P +  KA   L+
Sbjct: 87  -TPHEEAVLTNIAFMEAVHARSYSSVFSTLCTTPQIDEA--FRWAEENPLLQKKAQLVLE 143


>gi|313890786|ref|ZP_07824411.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pseudoporcinus SPIN 20026]
 gi|313120887|gb|EFR44001.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pseudoporcinus SPIN 20026]
          Length = 319

 Score = 40.0 bits (92), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L+D E+ ++ +  G     +++ +   V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSDQEKDLVGKVFGGLTLLDTMQSETGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            AI   +  P     L    F E+VH+ ++  I ++L
Sbjct: 75  EAIRADIRTPHEEAVLNNIQFMESVHAKSYSSIFSTL 111


>gi|323495950|ref|ZP_08101016.1| ribonucleoside-diphosphate reductase subunit beta [Vibrio
           sinaloensis DSM 21326]
 gi|323318985|gb|EGA71930.1| ribonucleoside-diphosphate reductase subunit beta [Vibrio
           sinaloensis DSM 21326]
          Length = 323

 Score = 40.0 bits (92), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 15/120 (12%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR---NLGFFASSESLVANNIVLAIYRHL 108
           N W+P +VP+ +D+  WK    LT++E+ +  R    L    + ++ V    ++A  R  
Sbjct: 32  NFWLPEKVPLSNDIQTWKQ---LTEEEQTLTIRVFTGLTLLDTIQNTVGAPALMADAR-- 86

Query: 109 SNPECRQYLLRQAFEEAVH----SHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ 164
             P     L   AF EAVH    S  F  + T+  +DE   F    E P +  KA   L+
Sbjct: 87  -TPHEEAVLTNIAFMEAVHARSYSSVFSTMCTTPQIDEA--FRWADENPLLQKKAQLVLE 143


>gi|289435502|ref|YP_003465374.1| ribonucleoside-diphosphate reductase beta chain [Listeria seeligeri
           serovar 1/2b str. SLCC3954]
 gi|289171746|emb|CBH28292.1| ribonucleoside-diphosphate reductase beta chain [Listeria seeligeri
           serovar 1/2b str. SLCC3954]
 gi|313632343|gb|EFR99385.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           seeligeri FSL N1-067]
 gi|313636848|gb|EFS02469.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           seeligeri FSL S4-171]
          Length = 349

 Score = 40.0 bits (92), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 26/124 (20%), Positives = 56/124 (45%), Gaps = 6/124 (4%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           + Y   +  Y     N+W+P EV M+ D    K    L++ E+      +G  A+ +S  
Sbjct: 39  IPYPSFYRAYKELSTNYWIPDEVDMKSDA---KQYPALSEQEKYAFDAIIGLLATLDS-P 94

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELFNMYREVPS 154
               +  I  ++++P         A +E +H+ ++ Y++ S+    ++  +F + R  P+
Sbjct: 95  QTRFIYNIAEYITDPAVHANAAIIAQQEVIHNESYSYVLASITNLQEQKRVFELARTHPT 154

Query: 155 ITAK 158
           I  +
Sbjct: 155 IIKR 158


>gi|296128314|ref|YP_003635564.1| Ribonucleoside-diphosphate reductase [Cellulomonas flavigena DSM
           20109]
 gi|296020129|gb|ADG73365.1| Ribonucleoside-diphosphate reductase [Cellulomonas flavigena DSM
           20109]
          Length = 326

 Score = 40.0 bits (92), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 9/120 (7%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  W +   LT+ E+ M  R        +++      +++     
Sbjct: 34  VGNFWLPEKVPVSNDIQSWAT---LTEAEKTMTTRVFTGLTLLDTIQGTVGAVSLIPDAL 90

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL----GLDEGELFNMYREVPSITAKANWALQY 165
            P         AF E+VH+ ++  I ++L     +DE   F    E P++  KA   L Y
Sbjct: 91  TPHEEAVYTNIAFMESVHAKSYSSIFSTLISTKEIDEA--FRWSEENPNLQRKAEIVLDY 148


>gi|320546423|ref|ZP_08040738.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           equinus ATCC 9812]
 gi|320448808|gb|EFW89536.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           equinus ATCC 9812]
          Length = 320

 Score = 40.0 bits (92), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L+D E+ ++ +  G     +++ + + V
Sbjct: 22  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSDQEKDLVGKVFGGLTLLDTMQSESGV 75

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            AI   +  P     L    F E+VH+ ++  I ++L
Sbjct: 76  EAIRADVRTPHEEAVLNNIQFMESVHAKSYSSIFSTL 112


>gi|300934659|ref|ZP_07149915.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           resistens DSM 45100]
          Length = 332

 Score = 40.0 bits (92), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 27/112 (24%), Positives = 48/112 (42%), Gaps = 14/112 (12%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           N W+P +VP+ +DL  W   NGL+D ER +  R        +++ A    ++  +     
Sbjct: 43  NFWLPEKVPLSNDLKDW---NGLSDIERTLTMRVFTGLTLLDTMQATVGEISQIQDAQTE 99

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWAL 163
                    AF ++VH+ ++  + ++L              PSI A   WA+
Sbjct: 100 HEEAVYTNIAFMQSVHARSYSSVFSTLA-----------NTPSINAAYEWAV 140


>gi|297563117|ref|YP_003682091.1| ribonucleotide-diphosphate reductase subunit beta [Nocardiopsis
           dassonvillei subsp. dassonvillei DSM 43111]
 gi|296847565|gb|ADH69585.1| ribonucleotide-diphosphate reductase subunit beta [Nocardiopsis
           dassonvillei subsp. dassonvillei DSM 43111]
          Length = 331

 Score = 40.0 bits (92), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 17/113 (15%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
           LPLK       +       W P ++ +  D   W+   GL +  R  I R   FF + E 
Sbjct: 32  LPLKL------FAKGNARFWNPADIDLSRDAEDWE---GLGEGARARILRLCAFFVAGEE 82

Query: 95  LVANNI-----VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE 142
            V  +I      +A    L +     YL + AFEEA H   F+  + +LG+ E
Sbjct: 83  AVTEDIQPFLRAMAAEGRLGD---EMYLTQFAFEEARHVQAFRLWLDALGVHE 132


>gi|169630485|ref|YP_001704134.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           abscessus ATCC 19977]
 gi|169242452|emb|CAM63480.1| Probable ribonucleoside-diphosphate reductase beta subunit
           [Mycobacterium abscessus]
          Length = 324

 Score = 40.0 bits (92), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 9/120 (7%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  W   N LTD E+ +  R        +++      +++     
Sbjct: 32  TGNFWLPEKVPVSNDIQSW---NTLTDHEKQLTMRVFTGLTLLDTIQGTVGAVSLIPDAI 88

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL----GLDEGELFNMYREVPSITAKANWALQY 165
            P         AF E+VH+ ++  I ++L     +D+   F    E P++  KA   ++Y
Sbjct: 89  TPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTREIDDA--FRWSEENPNLQRKAEIVMEY 146


>gi|251782830|ref|YP_002997133.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
 gi|242391460|dbj|BAH81919.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
          Length = 319

 Score = 40.0 bits (92), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L+D E+ ++ +  G     +++ + + V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSDIEKDLVGKVFGGLTLLDTMQSESGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            AI + +  P     L    F E+VH+ ++  I ++L
Sbjct: 75  EAIRQDVRTPHEEAVLNNIQFMESVHAKSYSSIFSTL 111


>gi|285016983|ref|YP_003374694.1| ribonucleotide-diphosphate reductase beta subunit protein
           [Xanthomonas albilineans GPE PC73]
 gi|283472201|emb|CBA14708.1| probable ribonucleotide-diphosphate reductase beta subunit protein
           [Xanthomonas albilineans]
          Length = 346

 Score = 39.7 bits (91), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 33/156 (21%), Positives = 68/156 (43%), Gaps = 14/156 (8%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           + Y   +  Y     N W+P EV M+ D    K    L+  E+      +G  A+ +S  
Sbjct: 36  IPYPSFYRAYKELSTNFWIPDEVDMKGDA---KQYGELSAREKNAYDSIIGLLATLDS-P 91

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL-GL-DEGELFNMYREVPS 154
               +  +  ++++P           +E +H+ ++ Y++ S+ GL D+  +F + R  P+
Sbjct: 92  QTRFIYNVAEYITDPAAHANAAIIGQQEVIHNESYSYVLASIAGLADQNRVFEIARTHPT 151

Query: 155 ITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSL 190
           I A+    +Q        ++  + + + +  L RSL
Sbjct: 152 IVARNQPIMQ--------AYDDFMREKTAETLLRSL 179


>gi|330004285|ref|ZP_08304843.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           MS 92-3]
 gi|328536657|gb|EGF62979.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           MS 92-3]
          Length = 380

 Score = 39.7 bits (91), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 2/107 (1%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   + +K  L D ER +   NL +    +S+   +  + +    S PE 
Sbjct: 49  WRPEEVDISQDRIDYMTK--LADHERHIFNSNLRYQTLLDSVQGRSPNVTLLPLASIPEL 106

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKAN 160
             ++   AF E +HS ++ +II  +  D  E+F+       I ++A+
Sbjct: 107 ETWIETWAFSETIHSRSYTHIIRGMVDDPSEIFDGIVTDEQIISRAS 153


>gi|307107666|gb|EFN55908.1| hypothetical protein CHLNCDRAFT_57791 [Chlorella variabilis]
          Length = 849

 Score = 39.7 bits (91), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 64/165 (38%), Gaps = 27/165 (16%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSA--------------CNNHWM-------PTEVP 60
           K +L+   D   + PLK    W +Y  A              C  H           +V 
Sbjct: 557 KPLLDENPDRYCMFPLKEDRVWSQYKKAEASRPSGQAPNDPLCMAHTTFWTTFWTAEDVD 616

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
              D   W+ +  L   ER  +   L + A+S+ L+ +N+V      +   E R +   Q
Sbjct: 617 FSSDARDWQDR--LAPGERSFLSSVLAYLAASDRLIQHNVVARFMIDVELAEARAFYAFQ 674

Query: 121 AFEEAVHSHTFQYIITSL-GLDEGELFNMYREV---PSITAKANW 161
            F++ VH+     I+ +L    E +L  + R V   P+  AKA W
Sbjct: 675 LFKKNVHTEMVSAILAALFAGKEEQLAAVLRTVLALPAFQAKAAW 719


>gi|323127635|gb|ADX24932.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           dysgalactiae subsp. equisimilis ATCC 12394]
          Length = 319

 Score = 39.7 bits (91), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L+D E+ ++ +  G     +++ + + V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSDIEKDLVGKVFGGLTLLDTMQSESGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            AI + +  P     L    F E+VH+ ++  I ++L
Sbjct: 75  EAIRQDVRTPHEEAVLNNIQFMESVHAKSYSSIFSTL 111


>gi|120403054|ref|YP_952883.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           vanbaalenii PYR-1]
 gi|119955872|gb|ABM12877.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Mycobacterium vanbaalenii PYR-1]
          Length = 324

 Score = 39.7 bits (91), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 60/137 (43%), Gaps = 10/137 (7%)

Query: 32  NQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFAS 91
           N+L   K    WE+      N W+P +VP+ +D+  W   N LT  E+ +  R       
Sbjct: 17  NRLQDDKDAEVWER---LTGNFWLPEKVPVSNDIPSW---NTLTAHEKQLTMRVFTGLTL 70

Query: 92  SESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR- 150
            +++      +++      P         AF E+VH+ ++  I ++L     E+ + +R 
Sbjct: 71  LDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHARSYSNIFSTL-CSTAEIDDAFRW 129

Query: 151 --EVPSITAKANWALQY 165
             E P++  KA   +QY
Sbjct: 130 SEENPNLQRKAEIVMQY 146


>gi|171779598|ref|ZP_02920554.1| hypothetical protein STRINF_01435 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281700|gb|EDT47134.1| hypothetical protein STRINF_01435 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 138

 Score = 39.7 bits (91), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L+D E+ ++ +  G     +++ + + V
Sbjct: 21  TWEKL---TEQFWLDTRIPLSNDLDDWRK---LSDQEKDLVGKVFGGLTLLDTMQSESGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            AI   +  P     L    F E+VH+ ++  I ++L
Sbjct: 75  EAIRADVRTPHEEAVLNNIQFMESVHAKSYSSIFSTL 111


>gi|203454817|ref|YP_002225133.1| gp256 [Mycobacterium phage Myrna]
 gi|197311865|gb|ACH62223.1| gp256 [Mycobacterium phage Myrna]
          Length = 322

 Score = 39.7 bits (91), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 3/89 (3%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
            NN W+P ++P+ +D+  W     LT++ERL+  R        +++      +++     
Sbjct: 30  TNNFWLPEKIPVSNDVQSWHQ---LTEEERLITMRVFTGLTMLDTIQGTVGAVSLIPDAI 86

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            P         AF E+VH+ ++  I ++L
Sbjct: 87  TPHEEAVYTNIAFMESVHARSYSNIFSTL 115


>gi|16332312|ref|NP_443040.1| hypothetical protein slr0591 [Synechocystis sp. PCC 6803]
 gi|1653942|dbj|BAA18852.1| slr0591 [Synechocystis sp. PCC 6803]
          Length = 355

 Score = 39.7 bits (91), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 6/111 (5%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA-LWKSKNGLTDDERLMIKRNLG 87
           +++ QL  ++Y WA   Y     N W+P  + +  D+   W     LT++ER      L 
Sbjct: 37  TNLMQLNDVRYNWAVGLYQQMRENFWIPQRLDITQDVTDYW----NLTNEERYAFDGILS 92

Query: 88  FFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           +    +S+   NI   +   ++ PE    +  Q  +E +H+ ++QY+I ++
Sbjct: 93  YLTFLDSVQTCNIP-HLKSSVTAPEISLCMAEQISQEGMHNQSYQYMIETI 142


>gi|254823272|ref|ZP_05228273.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           intracellulare ATCC 13950]
          Length = 313

 Score = 39.7 bits (91), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 12/122 (9%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
           LPLK       +       W P ++    D   W+    LT+DER    R    F + E 
Sbjct: 19  LPLKL------FAGGNAKFWNPADIDFSRDREDWER---LTEDERSYATRLCAEFIAGEE 69

Query: 95  LVANNI--VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
            V  +I   +A  R         YL + AFEEA H   F+  + ++G+ E +L     +V
Sbjct: 70  SVTQDIQPFMAAMRAEGRLGDEMYLTQFAFEEAKHVQVFRMWLDAVGITE-DLHYFLDDV 128

Query: 153 PS 154
           P+
Sbjct: 129 PT 130


>gi|254820788|ref|ZP_05225789.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           intracellulare ATCC 13950]
          Length = 324

 Score = 39.7 bits (91), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 60/137 (43%), Gaps = 10/137 (7%)

Query: 32  NQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFAS 91
           N+L   K    W++      N W+P +VP+ +DL  W +   LT  E+ M  R       
Sbjct: 17  NRLQDEKDAEVWDR---LTGNFWLPEKVPVSNDLPSWGT---LTAHEKQMTMRVFTGLTL 70

Query: 92  SESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR- 150
            +++      +++      P         AF E+VH+ ++  I ++L     E+ + +R 
Sbjct: 71  LDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHARSYSNIFSTL-CSTAEIDDAFRW 129

Query: 151 --EVPSITAKANWALQY 165
             E P++  KA   +QY
Sbjct: 130 SEENPNLQRKAEIVMQY 146


>gi|116670901|ref|YP_831834.1| ribonucleotide-diphosphate reductase subunit beta [Arthrobacter sp.
           FB24]
 gi|116611010|gb|ABK03734.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Arthrobacter sp. FB24]
          Length = 324

 Score = 39.7 bits (91), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 28/120 (23%), Positives = 52/120 (43%), Gaps = 5/120 (4%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
            NN W+P +VP+ +D+  W +   LT DE+ +  R        +++      +++     
Sbjct: 32  VNNFWLPEKVPLSNDVQSWAT---LTPDEQQLTMRVFTGLTLLDTIQGTVGAVSLIPDAI 88

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQ 167
            P         AF E+VH+ ++  I ++L   +   E F    E  ++  KA   + Y Q
Sbjct: 89  TPHEEAVYTNIAFMESVHAKSYSSIFSTLASTKEIDEAFRWSTENANLQKKAQIVMDYYQ 148


>gi|322412098|gb|EFY03006.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           dysgalactiae subsp. dysgalactiae ATCC 27957]
          Length = 319

 Score = 39.7 bits (91), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L+D E+ ++ +  G     +++ + + V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSDLEKDLVGKVFGGLTLLDTMQSESGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            AI + +  P     L    F E+VH+ ++  I ++L
Sbjct: 75  EAIRQDVRTPHEEAVLNNIQFMESVHAKSYSSIFSTL 111


>gi|319944853|ref|ZP_08019115.1| ribonucleotide-diphosphate reductase subunit beta [Lautropia
           mirabilis ATCC 51599]
 gi|319741423|gb|EFV93848.1| ribonucleotide-diphosphate reductase subunit beta [Lautropia
           mirabilis ATCC 51599]
          Length = 333

 Score = 39.3 bits (90), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 5/123 (4%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           N W+P +VP+ +D+  W +   L ++E+ +  R        +++       ++      P
Sbjct: 43  NFWLPEKVPLSNDVQSWAT---LREEEQTLTIRVFTGLTLLDTIQNTVGAPSMMPDAQTP 99

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANWALQYTQTL 169
                L   AF EAVH+ ++  I ++L    +  E F    E P + AKA   L+     
Sbjct: 100 HEEAVLTNIAFMEAVHARSYSSIFSTLCSTREVDEAFRWSEENPQLQAKARLILEEYDAA 159

Query: 170 SSP 172
           S P
Sbjct: 160 SDP 162


>gi|284009251|emb|CBA76360.1| ribonucleoside-diphosphate reductase beta chain [Arsenophonus
           nasoniae]
          Length = 321

 Score = 39.3 bits (90), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 33/149 (22%), Positives = 63/149 (42%), Gaps = 19/149 (12%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P ++P+ +D+  W   N LT +E+ +  R        +++  N    A+     
Sbjct: 29  TTNFWLPEKIPLSNDIPTW---NTLTKEEKKLTIRVFTGLTLLDTIQNNVGAPALMTDAL 85

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYREVPSITAKANWALQYTQ 167
            P     +   +F EAVH+ ++  I ++L L  D  + +    E  ++  KA+  L+   
Sbjct: 86  TPHEEAVMSNISFMEAVHARSYSSIFSTLCLTTDVDDAYQWSEENSALQKKAHLILE--- 142

Query: 168 TLSSPSFHYWN----KRRRSRILTRSLRF 192
                  HY N    K++ + +   S  F
Sbjct: 143 -------HYCNTHPLKKKIASVFLESFLF 164


>gi|315283233|ref|ZP_07871471.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           marthii FSL S4-120]
 gi|313613124|gb|EFR87028.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           marthii FSL S4-120]
          Length = 349

 Score = 39.3 bits (90), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 25/124 (20%), Positives = 56/124 (45%), Gaps = 6/124 (4%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           + Y   +  Y     N+W+P EV M+ D    K    L+++E+      +G  A+ +S  
Sbjct: 39  IPYPSFYRAYKELSTNYWIPDEVDMKSDA---KQYPNLSEEEKYAFDAIIGLLATLDS-P 94

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELFNMYREVPS 154
               +  I  ++++P           +E +H+ ++ Y++ S+    ++  +F + R  P+
Sbjct: 95  QTRFIYNIAEYITDPAVHANAAIIGQQEVIHNESYSYVLASITNLQEQNRVFELARTHPT 154

Query: 155 ITAK 158
           I  +
Sbjct: 155 IIKR 158


>gi|41409193|ref|NP_962029.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           avium subsp. paratuberculosis K-10]
 gi|41398013|gb|AAS05643.1| NrdG [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 324

 Score = 39.3 bits (90), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 7/119 (5%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +DL  W +   LT  E+ M  R        +++      +++     
Sbjct: 32  TGNFWLPEKVPVSNDLQSWAT---LTAHEKQMTMRVFTGLTLLDTIQGTVGAVSLIPDAL 88

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR---EVPSITAKANWALQY 165
            P         AF E+VH+ ++  I ++L     E+ + +R   E P++  KA   +QY
Sbjct: 89  TPHEEAVYTNIAFMESVHARSYSNIFSTL-CSTAEIDDAFRWSEENPNLQRKAEIVMQY 146


>gi|88801048|ref|ZP_01116596.1| ribonucleotide-diphosphate reductase beta subunit [Reinekea sp.
           MED297]
 gi|88776187|gb|EAR07414.1| ribonucleotide-diphosphate reductase beta subunit [Reinekea sp.
           MED297]
          Length = 369

 Score = 39.3 bits (90), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 3/106 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +Q D    K    L ++E+ +   NL +    +S+   +  +A    +S PE 
Sbjct: 49  WRPEEVDLQRDR---KDFIALPENEKHIFLSNLKYQTLLDSVQGRSPNVAFLPIVSLPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKA 159
             ++   AF E VHS ++ +II ++  +  ++F      P I  +A
Sbjct: 106 ETWIETWAFSETVHSRSYTHIIRNIVTEPDQIFEDIVTTPEIIERA 151


>gi|296140644|ref|YP_003647887.1| ribonucleoside-diphosphate reductase [Tsukamurella paurometabola
           DSM 20162]
 gi|296028778|gb|ADG79548.1| Ribonucleoside-diphosphate reductase [Tsukamurella paurometabola
           DSM 20162]
          Length = 334

 Score = 39.3 bits (90), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 3/89 (3%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  W +   LTD E+ +  R        +++      +++    +
Sbjct: 42  TGNFWLPEKVPVSNDIPSWGT---LTDYEKQLTMRVFTGLTLLDTIQGTVGAVSLIPDAT 98

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            P     L   AF E+VH+ ++  I ++L
Sbjct: 99  TPHEEAVLTNIAFMESVHAKSYSSIFSTL 127


>gi|118465359|ref|YP_883075.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           avium 104]
 gi|118166646|gb|ABK67543.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
           avium 104]
          Length = 324

 Score = 39.3 bits (90), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 7/119 (5%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +DL  W +   LT  E+ M  R        +++      +++     
Sbjct: 32  TGNFWLPEKVPVSNDLQSWAT---LTAHEKQMTMRVFTGLTLLDTIQGTVGAVSLIPDAL 88

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR---EVPSITAKANWALQY 165
            P         AF E+VH+ ++  I ++L     E+ + +R   E P++  KA   +QY
Sbjct: 89  TPHEEAVYTNIAFMESVHARSYSNIFSTL-CSTAEIDDAFRWSEENPNLQRKAEIVMQY 146


>gi|296393703|ref|YP_003658587.1| ribonucleoside-diphosphate reductase [Segniliparus rotundus DSM
           44985]
 gi|296180850|gb|ADG97756.1| Ribonucleoside-diphosphate reductase [Segniliparus rotundus DSM
           44985]
          Length = 334

 Score = 39.3 bits (90), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 5/117 (4%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  W +   L +DE+ +  R        +++  +   +++     
Sbjct: 42  VGNFWLPEKVPLSNDIQSWHT---LNEDEQRLTMRVFTGLTLLDTIQGSVGAVSLIPDAL 98

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL-GLDE-GELFNMYREVPSITAKANWALQ 164
            P         AF E+VH+ ++  I ++L G  E  E F    E P++  KA   L+
Sbjct: 99  TPHEEAVYTNIAFMESVHAKSYSSIFSTLTGTPEIDEAFRWSEENPALQKKAAIVLE 155


>gi|320095222|ref|ZP_08026924.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces sp.
           oral taxon 178 str. F0338]
 gi|319977850|gb|EFW09491.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces sp.
           oral taxon 178 str. F0338]
          Length = 319

 Score = 39.3 bits (90), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 3/89 (3%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +DL  W++   L  DE+ M  R        ++L      +++     
Sbjct: 27  TGNFWLPEKVPLSNDLPSWQT---LNKDEQTMTNRVFTGLTLLDTLQGTVGAVSLIPDAR 83

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            P         AF E+VH+ ++  I ++L
Sbjct: 84  TPHEEAVYTNIAFMESVHAKSYSSIFSTL 112


>gi|68171256|ref|ZP_00544659.1| Ribonucleoside-diphosphate reductase [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|67999338|gb|EAM85984.1| Ribonucleoside-diphosphate reductase [Ehrlichia chaffeensis str.
           Sapulpa]
          Length = 294

 Score = 39.3 bits (90), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 6/92 (6%)

Query: 55  MPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECR 114
           +P EVP+ DD+  WK+   L++ E+ ++ +   FF  ++ +  NN  +  Y ++  P   
Sbjct: 1   LPEEVPLADDVQDWKTV--LSEKEKNLLVQIFRFFTQAD-IEVNNCYMKHYSNIFKP-TE 56

Query: 115 QYLLRQAFE--EAVHSHTFQYIITSLGLDEGE 144
             ++  AF   E +H   + Y++ ++G+ E E
Sbjct: 57  VCMMLSAFSNMETIHIAAYSYLLDTIGMPEIE 88


>gi|240168452|ref|ZP_04747111.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           kansasii ATCC 12478]
          Length = 314

 Score = 39.3 bits (90), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 12/122 (9%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
           LPLK       +       W P ++    +   W   + LTD ER    R    F + E 
Sbjct: 19  LPLKL------FAGGNAKFWDPADIDFSREREDW---DRLTDTERDYAIRLCAQFVAGEE 69

Query: 95  LVANNI--VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
            V  +I   +A  R         YL + AFEEA H+  F+  + S+G+  G+L     ++
Sbjct: 70  AVTEDIQPFMAAMRAEGRLADEMYLTQFAFEEAKHTQVFRMWLDSVGV-TGDLHGYLDDL 128

Query: 153 PS 154
           PS
Sbjct: 129 PS 130


>gi|221104331|ref|XP_002154681.1| PREDICTED: similar to ribonucleotide reductase small subunit,
           partial [Hydra magnipapillata]
          Length = 261

 Score = 39.3 bits (90), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 17/133 (12%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL--MIKRNLGFFASSESL 95
           K+   W+ Y    + +W   E+   +D       + L  D+ +   IKR L FFA ++S+
Sbjct: 57  KHKVIWDLYKKQKDAYWTAEEIDFSND-----RHDFLKVDKNIQHFIKRILAFFAGADSI 111

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFE---EAVHSHTFQYIITSLGLD---EGELFNMY 149
           V  N    I + LS    ++  +   F+   E  HS  +  ++  +  D     EL N +
Sbjct: 112 VNIN----IKKKLSKITVKEAEIAYGFQQMMEDTHSEVYADMLIKIITDPVERDELINAF 167

Query: 150 REVPSITAKANWA 162
           + V SI     WA
Sbjct: 168 KTVASIKRMIQWA 180


>gi|86148040|ref|ZP_01066342.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp.
           MED222]
 gi|85834173|gb|EAQ52329.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp.
           MED222]
          Length = 320

 Score = 39.3 bits (90), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 9/116 (7%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           N W+P +VP+ +D+  WK    LT++E+ +  R        +++       A+      P
Sbjct: 29  NFWLPEKVPLSNDIQTWKQ---LTEEEQTLTIRVFTGLTLLDTIQNTVGAPALMEDARTP 85

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSL----GLDEGELFNMYREVPSITAKANWAL 163
                L   AF EAVH+ ++  + ++L     +DE   F    E P +  KA   L
Sbjct: 86  HEEAVLTNIAFMEAVHARSYSSVFSTLCTTPQIDEA--FRWAEENPLLQKKAQIIL 139


>gi|158430770|pdb|2RCC|A Chain A, Crystal Structure Of Putative Class I Ribonucleotide
           Reductase (Np_241368.1) From Bacillus Halodurans At 1.90
           A Resolution
 gi|158430771|pdb|2RCC|B Chain B, Crystal Structure Of Putative Class I Ribonucleotide
           Reductase (Np_241368.1) From Bacillus Halodurans At 1.90
           A Resolution
 gi|158430772|pdb|2RCC|C Chain C, Crystal Structure Of Putative Class I Ribonucleotide
           Reductase (Np_241368.1) From Bacillus Halodurans At 1.90
           A Resolution
          Length = 346

 Score = 38.9 bits (89), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 24/102 (23%), Positives = 50/102 (49%), Gaps = 4/102 (3%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +++ WA+  Y +   N W P E+    D   + +   LT+ E+   K+ +G  A  +S+ 
Sbjct: 36  VRFSWAYPLYKNXLANFWTPFEINXSHDAKQFPT---LTETEQEAFKKIIGLLAFLDSVQ 92

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            +    A   +L++          +F+E VH+ ++ Y+++SL
Sbjct: 93  TDYSXRAA-EYLTDSSLAALXSVLSFQEVVHNQSYSYVLSSL 133


>gi|124487872|gb|ABN12019.1| putative ribonucleotide reductase R2 subunit [Maconellicoccus
           hirsutus]
          Length = 249

 Score = 38.9 bits (89), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 3/73 (4%)

Query: 95  LVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYRE 151
           +V +N+V    + +  PE R +   Q     +HS  +  +I SL  D  E   +FN    
Sbjct: 1   IVNDNLVKRFSQEVQVPEARAFFGFQISNAGIHSEMYSVLIESLIKDANEKNLIFNTIET 60

Query: 152 VPSITAKANWALQ 164
           VP +  K +W L+
Sbjct: 61  VPCVKKKKDWVLR 73


>gi|81428551|ref|YP_395551.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           sakei subsp. sakei 23K]
 gi|78610193|emb|CAI55242.1| Ribonucleoside-diphosphate reductase, beta chain [Lactobacillus
           sakei subsp. sakei 23K]
          Length = 318

 Score = 38.9 bits (89), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+S   L D+E+ ++    G     ++L + + +
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRS---LPDNEKWIVGHVFGGLTLLDTLQSQDGM 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            ++  ++  P     L    F E+VH+ ++  I ++L
Sbjct: 75  ASLKANIRTPHEEAVLNNIQFMESVHAKSYSSIFSTL 111


>gi|326781924|ref|YP_004322326.1| ribonucleotide reductase A subunit [Synechococcus phage S-SM2]
 gi|310003114|gb|ADO97512.1| ribonucleotide reductase A subunit [Synechococcus phage S-SM2]
          Length = 397

 Score = 38.9 bits (89), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 3/94 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +Q D   +++   L  +++ +   NL +    +S+      +A   + S PE 
Sbjct: 68  WRPEEVSLQKDRGDYQT---LRPEQKHIYTSNLKYQIMLDSIQGRGPGMAFIPYCSLPEL 124

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFN 147
              +    F E +HS ++ YII ++  D  E+F+
Sbjct: 125 EACMEVWGFMEMIHSRSYTYIIKNVYSDPSEVFD 158


>gi|307244651|ref|ZP_07526755.1| ribonucleoside-diphosphate reductase, beta subunit
           [Peptostreptococcus stomatis DSM 17678]
 gi|306492032|gb|EFM64081.1| ribonucleoside-diphosphate reductase, beta subunit
           [Peptostreptococcus stomatis DSM 17678]
          Length = 328

 Score = 38.9 bits (89), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 58/122 (47%), Gaps = 7/122 (5%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W+P EVP+  D+  W     L++ ER++ KR L      ++   N+ + ++     N + 
Sbjct: 39  WLPEEVPISKDIPSWSQ---LSESERVLYKRVLAGLTLLDTKQGNDGIPSMMELTENFQR 95

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY---REVPSITAKANWALQYTQTLS 170
           +  L      E +H+ ++  I T+L L + E+ +++    E P +  KA   L+  +   
Sbjct: 96  KAVLSFMGTMEEIHAKSYSSIFTTL-LSKQEINDLFVWIEEEPLLQNKAKLVLRQYKNTH 154

Query: 171 SP 172
           +P
Sbjct: 155 TP 156


>gi|308068541|ref|YP_003870146.1| Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide
           reductase small subunit) [Paenibacillus polymyxa E681]
 gi|305857820|gb|ADM69608.1| Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide
           reductase small subunit) [Paenibacillus polymyxa E681]
          Length = 321

 Score = 38.9 bits (89), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 7/122 (5%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W   E+P+ DD   W +   L+D E+    + LG     +++     +  I  H+   + 
Sbjct: 29  WTDDEIPLSDDKMSWVT---LSDIEKEAYMKVLGGLTLLDTIQGGVGMPQIMEHVDGLQR 85

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR---EVPSITAKANWALQYTQTLS 170
           +  L   A  E +H+ ++  I T+L   E E+  ++R   E P +  KA    QY   + 
Sbjct: 86  KAVLSFMAMMEQIHAKSYSSIFTTLASTE-EIDGVFRWVEENPHLQTKAETIRQYYMNIH 144

Query: 171 SP 172
           +P
Sbjct: 145 TP 146


>gi|37525251|ref|NP_928595.1| ribonucleotide-diphosphate reductase subunit beta [Photorhabdus
           luminescens subsp. laumondii TTO1]
 gi|36784678|emb|CAE13578.1| ribonucleoside-diphosphate reductase 2 beta chain (ribonucleotide
           reductase 2) (R2f protein) [Photorhabdus luminescens
           subsp. laumondii TTO1]
          Length = 319

 Score = 38.9 bits (89), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 32/145 (22%), Positives = 62/145 (42%), Gaps = 11/145 (7%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P ++P+ +D+  W   N LT +E+ +  R        +++       A+     
Sbjct: 27  TTNFWLPEKIPLSNDITSW---NTLTTEEKKLTIRVFTGLTLLDTIQNTVGAPALMEDAL 83

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYREVPSITAKANWALQYTQ 167
            P     +   +F EAVH+ ++  I ++L L  D  + +    +  S+  KA   L Y  
Sbjct: 84  TPHEEAVMSNISFMEAVHARSYSSIFSTLCLTTDVDDAYRWSEKSFSLQNKAKIILNYY- 142

Query: 168 TLSSPSFHYWNKRRRSRILTRSLRF 192
                S+H+  K++ + +   S  F
Sbjct: 143 -----SYHHPLKKKIASVFLESFLF 162


>gi|70727160|ref|YP_254076.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           haemolyticus JCSC1435]
 gi|68447886|dbj|BAE05470.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus
           haemolyticus JCSC1435]
          Length = 322

 Score = 38.9 bits (89), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 3/85 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W+ TE  +  D+A WK+   LT+DE+   KR L      ++  A++ +  I  H ++   
Sbjct: 25  WVETEFKVSKDIASWKT---LTEDEKNTFKRALAGLTGLDTHQADDGMPLIMLHTTDLRK 81

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSL 138
           +      A  E +H+ ++ +I T+L
Sbjct: 82  KAVYSFMAMMEQIHAKSYSHIFTTL 106


>gi|119387083|ref|YP_918138.1| ribonucleotide-diphosphate reductase subunit beta [Paracoccus
           denitrificans PD1222]
 gi|119377678|gb|ABL72442.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Paracoccus denitrificans PD1222]
          Length = 329

 Score = 38.9 bits (89), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 10/143 (6%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           N W+P +VP+ +D+  W +   L  +ER +  R        +++       A+      P
Sbjct: 39  NFWLPEKVPLSNDVQSWAT---LRPEERELTIRVFTGLTLLDTIQNTVGAPAMMPDALTP 95

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYREVPSITAKANWALQYTQTL 169
                L   AF EAVH+ ++  I ++L L  +    F    E P +  KA   L+  +  
Sbjct: 96  HEEAVLSNIAFMEAVHARSYSSIFSTLCLTPEVDAAFRWAEENPHLQQKARLVLEEYKAG 155

Query: 170 SSPSFHYWNKRRRSRILTRSLRF 192
           S P      KR+ + +   S  F
Sbjct: 156 SDPL-----KRKIASVFLESFMF 173


>gi|310641424|ref|YP_003946182.1| ribonucleoside-diphosphate reductase beta chain [Paenibacillus
           polymyxa SC2]
 gi|309246374|gb|ADO55941.1| Ribonucleoside-diphosphate reductase beta chain [Paenibacillus
           polymyxa SC2]
          Length = 321

 Score = 38.9 bits (89), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 7/122 (5%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W   E+P+ DD   W +   L+D E+    + LG     +++     +  I  H+   + 
Sbjct: 29  WTDDEIPLSDDKMSWVT---LSDIEKEAYMKVLGGLTLLDTIQGGVGMPQIMEHVDGLQR 85

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR---EVPSITAKANWALQYTQTLS 170
           +  L   A  E +H+ ++  I T+L   E E+  ++R   E P +  KA    QY   + 
Sbjct: 86  KAVLSFMAMMEQIHAKSYSSIFTTLASTE-EIDGVFRWVEENPHLQTKAETIRQYYMNIH 144

Query: 171 SP 172
           +P
Sbjct: 145 TP 146


>gi|296171158|ref|ZP_06852606.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           parascrofulaceum ATCC BAA-614]
 gi|295894294|gb|EFG74049.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           parascrofulaceum ATCC BAA-614]
          Length = 324

 Score = 38.9 bits (89), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 60/137 (43%), Gaps = 10/137 (7%)

Query: 32  NQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFAS 91
           N+L   K    W++      N W+P +VP+ +DL  W +   LT  E+ +  R       
Sbjct: 17  NRLQDEKDAEVWDR---LTGNFWLPEKVPVSNDLPSWAT---LTSGEKQLTMRVFTGLTL 70

Query: 92  SESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR- 150
            +++      +++      P         AF E+VH+ ++  I ++L     E+ + +R 
Sbjct: 71  LDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHARSYSNIFSTL-CSTAEIDDAFRW 129

Query: 151 --EVPSITAKANWALQY 165
             E P++  KA   +QY
Sbjct: 130 SEENPNLQRKAEIVMQY 146


>gi|325914792|ref|ZP_08177129.1| ribonucleotide reductase, beta subunit [Xanthomonas vesicatoria
           ATCC 35937]
 gi|325538985|gb|EGD10644.1| ribonucleotide reductase, beta subunit [Xanthomonas vesicatoria
           ATCC 35937]
          Length = 349

 Score = 38.9 bits (89), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 6/124 (4%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           + Y   +  Y     N W+P EV M+ D    +  N L+  E+      +G  A+ +S  
Sbjct: 39  IPYPSFYRAYKELSTNFWIPDEVDMKGDA---RQYNELSSREKNAYDSIIGLLATLDS-P 94

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL-GL-DEGELFNMYREVPS 154
               +  +  ++++P           +E +H+ ++ Y++ S+ GL D+  +F + R  P+
Sbjct: 95  QTRFIYNVAEYITDPAAHANAAIIGQQEVIHNESYSYVLASITGLADQNRVFEIARTHPT 154

Query: 155 ITAK 158
           I  +
Sbjct: 155 IIKR 158


>gi|125745092|ref|YP_001033969.1| ribonucleotide reductase subunit 2 [Gallid herpesvirus 2]
 gi|327488446|sp|Q77MS0|RIR2_GAHVM RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|7673151|gb|AAF66775.1|AF147806_39 ribonucleotide reductase small subunit [Gallid herpesvirus 2]
 gi|10180745|gb|AAG14233.1|AF243438_48 UL40 ribonucleotide reductase small subunit-like protein [Gallid
           herpesvirus 2]
 gi|104304005|gb|ABF72280.1| HSV-1 UL40-like protein [Gallid herpesvirus 2]
 gi|148806369|gb|ABR13125.1| UL40 [Gallid herpesvirus 2]
 gi|194346388|gb|ACF49570.1| UL40 [synthetic construct]
 gi|194750382|gb|ACF94859.1| UL40 [Gallid herpesvirus 2]
 gi|237626230|gb|ACR02753.1| UL40 [synthetic construct]
 gi|237626404|gb|ACR02926.1| UL40 [synthetic construct]
          Length = 343

 Score = 38.9 bits (89), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 12/116 (10%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNI--VLAIYRHLS 109
           N W  TE  + DDL   +  + LT++ER   +    F ++++ LV  NI  +L ++   S
Sbjct: 63  NRWTETEFVISDDL---RDVSMLTEEERYFYRFLFTFLSAADDLVNLNIDNLLGLF---S 116

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL----GLDEGELFNMYREVPSITAKANW 161
             +   Y   Q   EAVHS  +  I   L     L   E        P+I +K +W
Sbjct: 117 QKDIHHYYFEQECIEAVHSRAYSIIQLMLFDNDSLARAEYVKTSLNSPAIQSKLDW 172


>gi|254776333|ref|ZP_05217849.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           avium subsp. avium ATCC 25291]
          Length = 320

 Score = 38.9 bits (89), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 7/119 (5%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +DL  W +   LT  E+ M  R        +++      +++     
Sbjct: 28  TGNFWLPEKVPVSNDLQSWAT---LTAHEKQMTIRVFTGLTLLDTIQGTVGAVSLIPDAL 84

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR---EVPSITAKANWALQY 165
            P         AF E+VH+ ++  I ++L     E+ + +R   E P++  KA   +QY
Sbjct: 85  TPHEEAVYTNIAFMESVHARSYSNIFSTL-CSTAEIDDAFRWSEENPNLQRKAEIVMQY 142


>gi|261342124|ref|ZP_05969982.1| ribonucleoside-diphosphate reductase, beta subunit [Enterobacter
           cancerogenus ATCC 35316]
 gi|288315455|gb|EFC54393.1| ribonucleoside-diphosphate reductase, beta subunit [Enterobacter
           cancerogenus ATCC 35316]
          Length = 319

 Score = 38.9 bits (89), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 27/121 (22%), Positives = 53/121 (43%), Gaps = 5/121 (4%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
            +N W+P +VP+ +D+  W++ +       + +   L    + ++ V      A+     
Sbjct: 27  TSNFWLPEKVPLSNDIPAWQTLSHAEQQLTIRVFTGLTLLDTIQNTVG---APALMSDAL 83

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANWALQYTQ 167
            P     +   +F EAVH+ ++  I ++L    D    ++   E  S+  KAN  L+Y Q
Sbjct: 84  TPHEEAVMSNISFMEAVHARSYSSIFSTLCQTKDVDTAYDWSEECESLQRKANLVLEYYQ 143

Query: 168 T 168
            
Sbjct: 144 A 144


>gi|41387638|gb|AAS01682.1| ribonucleotide reductase small subunit [Gallid herpesvirus 2]
          Length = 343

 Score = 38.9 bits (89), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 12/116 (10%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNI--VLAIYRHLS 109
           N W  TE  + DDL   +  + LT++ER   +    F ++++ LV  NI  +L ++   S
Sbjct: 63  NRWTETEFVISDDL---RDVSMLTEEERYFYRFLFTFLSAADDLVNLNIDNLLGLF---S 116

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL----GLDEGELFNMYREVPSITAKANW 161
             +   Y   Q   EAVHS  +  I   L     L   E        P+I +K +W
Sbjct: 117 QKDIHHYYFEQECIEAVHSRAYSIIQLMLFDNDSLARAEYVKTSLNSPAIQSKLDW 172


>gi|61806369|ref|YP_214728.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM4]
 gi|61563913|gb|AAX46968.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM4]
          Length = 387

 Score = 38.9 bits (89), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 3/94 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +Q D   ++    LT +++ +   NL +    +S+      +A   + S PE 
Sbjct: 58  WRPEEVSLQKDRGDYQQ---LTPEQKHIFTSNLKYQIMLDSVQGRAPGMAFAPYCSLPEL 114

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFN 147
              +    F E +HS ++ YII ++  D  E+F+
Sbjct: 115 EGCINVWQFMEMIHSRSYTYIIKNVYSDPSEVFD 148


>gi|262203177|ref|YP_003274385.1| ribonucleoside-diphosphate reductase [Gordonia bronchialis DSM
           43247]
 gi|262086524|gb|ACY22492.1| Ribonucleoside-diphosphate reductase [Gordonia bronchialis DSM
           43247]
          Length = 334

 Score = 38.9 bits (89), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 3/89 (3%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  W   N LT+ E+ +  R        +++      +++    +
Sbjct: 42  TGNFWLPEKVPVSNDIPSW---NTLTEYEKQLTMRVFTGLTLLDTIQGTVGAVSLIPDAT 98

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            P     L   AF E+VH+ ++  I ++L
Sbjct: 99  TPHEEAVLTNIAFMESVHAKSYSSIFSTL 127


>gi|169838797|ref|ZP_02871985.1| ribonucleotide-diphosphate reductase subunit beta [candidate
          division TM7 single-cell isolate TM7a]
          Length = 71

 Score = 38.9 bits (89), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 3/55 (5%)

Query: 33 QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLG 87
          QL P++Y WA+  Y  A  N W P EV +  DLA +K+   L    R+++K+ L 
Sbjct: 19 QLKPVRYEWAYRLYNQAVANTWFPNEVQLVQDLADFKN---LQKTRRMLLKQLLA 70


>gi|221105497|ref|XP_002169241.1| PREDICTED: similar to ribonucleoside-diphosphate reductase small
           chain [Hydra magnipapillata]
          Length = 363

 Score = 38.9 bits (89), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 17/133 (12%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL--MIKRNLGFFASSESL 95
           K+   W+ Y    + +W   E+   +D       + L  D+ +   IKR L FFA ++S+
Sbjct: 57  KHKVIWDLYKKQKDAYWTAEEIDFSND-----RHDFLKVDKNIQHFIKRILAFFAGADSI 111

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFE---EAVHSHTFQYIITSLGLD---EGELFNMY 149
           V  N    I + LS    ++  +   F+   E  HS  +  ++  +  D     EL N +
Sbjct: 112 VNIN----IKKKLSKITVKEAEIAYGFQQMMEDTHSEVYADMLIKIITDPVERDELINAF 167

Query: 150 REVPSITAKANWA 162
           + V SI     WA
Sbjct: 168 KTVASIKRMIQWA 180


>gi|327493647|gb|AEA86506.1| Ribonucleotide reductase, small subunit [Campylobacter phage
           NCTC12673]
          Length = 378

 Score = 38.5 bits (88), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 11/141 (7%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF---FASSESLVANNIVLAIYRHLSN 110
           W P E+ M   +   KS   L +  +  IK NL F     S ++   +NI++ +      
Sbjct: 48  WFPEEISM---IHEPKSFIELPEHNQRQIKANLTFQTLMDSGQNRGLDNILIPLVTSSGL 104

Query: 111 PECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLS 170
             C   L  QA+ E +HS ++ +II S+  +  ++F+ Y E P I  + N  +   ++L 
Sbjct: 105 EGC---LKTQAYFEYIHSRSYSHIIKSVFPNPTDVFDEYCEYPEIKTRINDEIDTYESLE 161

Query: 171 SPSFHYWNKRRRSRILTRSLR 191
                  N   + +IL   LR
Sbjct: 162 GSLEE--NDENKLKILEACLR 180


>gi|325675841|ref|ZP_08155525.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus equi
           ATCC 33707]
 gi|325553812|gb|EGD23490.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus equi
           ATCC 33707]
          Length = 335

 Score = 38.5 bits (88), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 27/118 (22%), Positives = 52/118 (44%), Gaps = 5/118 (4%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  W +   LT +E+ +  R        +++      +++     
Sbjct: 43  TGNFWLPEKVPVSNDIQSWAT---LTPNEQQLTMRVFTGLTLLDTIQGTVGAVSLIPDAV 99

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYREVPSITAKANWALQY 165
            P     L   AF E+VH+ ++  I ++L    +  + F    E P++  KA   L Y
Sbjct: 100 TPHEEAVLTNIAFMESVHAKSYSQIFSTLCTTREIDDAFRWSEENPNLQRKAQIVLDY 157


>gi|226331040|ref|ZP_03806558.1| hypothetical protein PROPEN_04970 [Proteus penneri ATCC 35198]
 gi|225201835|gb|EEG84189.1| hypothetical protein PROPEN_04970 [Proteus penneri ATCC 35198]
          Length = 182

 Score = 38.5 bits (88), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 5/118 (4%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           N W+P ++P+ +D+  W +   LT  E+ +  R        +++        +      P
Sbjct: 32  NFWLPEKIPLSNDIPSWST---LTQAEKQLTIRVFTGLTLLDTIQNTVGAPTLMPDALTP 88

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYREVPSITAKANWALQYTQ 167
                L    F EAVH+ ++  I ++L L  D  E +    E P +  KA   L+Y Q
Sbjct: 89  HEEAVLSNICFMEAVHARSYSSIFSTLCLTTDVDEAYRWSEENPYLQKKAEIILRYYQ 146


>gi|108798796|ref|YP_638993.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           sp. MCS]
 gi|119867913|ref|YP_937865.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           sp. KMS]
 gi|126434397|ref|YP_001070088.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           sp. JLS]
 gi|108769215|gb|ABG07937.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Mycobacterium sp. MCS]
 gi|119694002|gb|ABL91075.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Mycobacterium sp. KMS]
 gi|126234197|gb|ABN97597.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Mycobacterium sp. JLS]
          Length = 320

 Score = 38.5 bits (88), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 28/119 (23%), Positives = 53/119 (44%), Gaps = 7/119 (5%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  W   N LT  E+ +  R        +++      +++     
Sbjct: 28  TGNFWLPEKVPVSNDIPSW---NTLTAHEKQLTMRVFTGLTLLDTIQGTVGAVSLIPDAL 84

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR---EVPSITAKANWALQY 165
            P         AF E+VH+ ++  I ++L     E+ + +R   E P++  KA   +QY
Sbjct: 85  TPHEEAVYTNIAFMESVHARSYSNIFSTL-CSTAEIDDAFRWSEENPNLQRKAEIVMQY 142


>gi|163842202|ref|YP_001626607.1| ribonucleotide-diphosphate reductase subunit beta [Renibacterium
           salmoninarum ATCC 33209]
 gi|162955678|gb|ABY25193.1| ribonucleoside-diphosphate reductase beta chain [Renibacterium
           salmoninarum ATCC 33209]
          Length = 325

 Score = 38.5 bits (88), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 3/89 (3%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
            NN W+P +VP+ +D+  W +   LT DE+ +  R        ++L      +++     
Sbjct: 33  VNNFWLPEKVPLSNDVQSWAT---LTPDEQQLTMRVFTGLTLLDTLQGTVGAVSLIPDAI 89

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            P         AF E+VH+ ++  I ++L
Sbjct: 90  TPHEEAVYTNIAFMESVHAKSYSSIFSTL 118


>gi|325919223|ref|ZP_08181270.1| ribonucleotide reductase, beta subunit [Xanthomonas gardneri ATCC
           19865]
 gi|325923021|ref|ZP_08184721.1| ribonucleotide reductase, beta subunit [Xanthomonas gardneri ATCC
           19865]
 gi|325546491|gb|EGD17645.1| ribonucleotide reductase, beta subunit [Xanthomonas gardneri ATCC
           19865]
 gi|325550297|gb|EGD21104.1| ribonucleotide reductase, beta subunit [Xanthomonas gardneri ATCC
           19865]
          Length = 347

 Score = 38.5 bits (88), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 6/124 (4%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           + Y   +  Y     N W+P EV M+ D    +  N L+  E+      +G  A+ +S  
Sbjct: 37  IPYPSFYRAYKELSTNFWIPDEVDMKGDA---RQYNELSAREKNAYDSIIGLLATLDS-P 92

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL-GL-DEGELFNMYREVPS 154
               +  +  ++++P           +E +H+ ++ Y++ S+ GL D+  +F + R  P+
Sbjct: 93  QTRFIYNVAEYITDPAAHANAAIIGQQEVIHNESYSYVLASITGLADQNRVFELARTHPT 152

Query: 155 ITAK 158
           I  +
Sbjct: 153 IIKR 156


>gi|240849861|ref|YP_002971249.1| ribonucleotide-diphosphate reductase subunit beta [Bartonella
           grahamii as4aup]
 gi|240266984|gb|ACS50572.1| ribonucleotide-diphosphate reductase subunit beta [Bartonella
           grahamii as4aup]
          Length = 324

 Score = 38.5 bits (88), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 3/87 (3%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           N W+P +VP+ +D+  W S   LTD+ER +  R        +++      +++       
Sbjct: 34  NFWLPEKVPLSNDIPSWSS---LTDEERKLTIRVFTGLTLLDTIQNTVGAISLLADAITE 90

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSL 138
                L   AF EAVH+ ++  I ++L
Sbjct: 91  HEEAVLTNIAFMEAVHARSYSSIFSTL 117


>gi|312140539|ref|YP_004007875.1| ribonucleoside-diphosphate reductase nrdf [Rhodococcus equi 103S]
 gi|311889878|emb|CBH49195.1| ribonucleoside-diphosphate reductase NrdF [Rhodococcus equi 103S]
          Length = 329

 Score = 38.5 bits (88), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 27/118 (22%), Positives = 52/118 (44%), Gaps = 5/118 (4%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  W +   LT +E+ +  R        +++      +++     
Sbjct: 37  TGNFWLPEKVPVSNDIQSWAT---LTPNEQQLTMRVFTGLTLLDTIQGTVGAVSLIPDAV 93

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYREVPSITAKANWALQY 165
            P     L   AF E+VH+ ++  I ++L    +  + F    E P++  KA   L Y
Sbjct: 94  TPHEEAVLTNIAFMESVHAKSYSQIFSTLCTTREIDDAFRWSEENPNLQRKAQIVLDY 151


>gi|319779630|ref|YP_004130543.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Taylorella equigenitalis MCE9]
 gi|317109654|gb|ADU92400.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Taylorella equigenitalis MCE9]
          Length = 377

 Score = 38.5 bits (88), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 3/94 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P E+ +  D   +    GL D E+ +   NL +    +S+   +  +A    +S PE 
Sbjct: 49  WRPEEIDVSQDRIDYA---GLPDHEKHIFISNLKYQTLLDSIQGRSPNVAFLPLVSIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFN 147
             ++   +F E +HS ++ +II ++ +D   +F+
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNISVDPSSIFD 139


>gi|66770372|ref|YP_245134.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           campestris pv. campestris str. 8004]
 gi|188993572|ref|YP_001905582.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           campestris pv. campestris str. B100]
 gi|66575704|gb|AAY51114.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas
           campestris pv. campestris str. 8004]
 gi|167735332|emb|CAP53546.1| Ribonucleoside-diphosphate reductase beta chain [Xanthomonas
           campestris pv. campestris]
          Length = 347

 Score = 38.5 bits (88), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 6/124 (4%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           + Y   +  Y     N W+P EV M+ D    +  N L+  E+      +G  A+ +S  
Sbjct: 37  IPYPSFYRAYKELSTNFWIPDEVDMKGDA---RQYNELSAREKNAYDSIIGLLATLDS-P 92

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL-GL-DEGELFNMYREVPS 154
               +  +  ++++P           +E +H+ ++ Y++ S+ GL D+  +F + R  P+
Sbjct: 93  QTRFIYNVAEYITDPAAHANAAIIGQQEVIHNESYSYVLASITGLADQNRVFEIARTHPT 152

Query: 155 ITAK 158
           I  +
Sbjct: 153 IIKR 156


>gi|331035505|gb|AEC53062.1| ribonucleotide reductase subunit B [Synechococcus phage S-CRM01]
          Length = 381

 Score = 38.5 bits (88), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 33/148 (22%), Positives = 62/148 (41%), Gaps = 3/148 (2%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
           + Q L  KY    +   +     W P EV +Q D + +++   L  +++ +   NL +  
Sbjct: 29  IQQYLDYKYPLFEKLTQTQLGFFWRPEEVSLQKDRSDYQN---LRPEQKHIFTSNLKYQV 85

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
             +S+      LA   + S PE    +    F E +HS ++ +II +L     E+F+   
Sbjct: 86  MLDSVQGRGPSLAFLPYCSLPELESCMEVWGFMEMIHSRSYTHIIKNLYPQPEEVFSTIL 145

Query: 151 EVPSITAKANWALQYTQTLSSPSFHYWN 178
               I  +A    +   +  + + HY N
Sbjct: 146 SDSKIMERAKSVTESYDSFINAAHHYDN 173


>gi|256832970|ref|YP_003161697.1| Ribonucleoside-diphosphate reductase [Jonesia denitrificans DSM
           20603]
 gi|256686501|gb|ACV09394.1| Ribonucleoside-diphosphate reductase [Jonesia denitrificans DSM
           20603]
          Length = 325

 Score = 38.5 bits (88), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 9/120 (7%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  W +   LT  E+ +  R        +++      +++     
Sbjct: 33  VGNFWVPEKVPVSNDIQSWAT---LTPQEQELTTRVFTGLTLLDTIQGTVGAVSLIPDAL 89

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL----GLDEGELFNMYREVPSITAKANWALQY 165
            P     L   AF E+VH+ ++  I ++L     +DE   F    E P +  KA   L+Y
Sbjct: 90  TPHEEAVLTNIAFMESVHAKSYSTIFSTLISTPEIDEA--FRWSEENPHLQRKAEIILEY 147


>gi|229818600|ref|YP_002880126.1| Ribonucleoside-diphosphate reductase [Beutenbergia cavernae DSM
           12333]
 gi|229564513|gb|ACQ78364.1| Ribonucleoside-diphosphate reductase [Beutenbergia cavernae DSM
           12333]
          Length = 326

 Score = 38.5 bits (88), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 3/89 (3%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
            NN W+P +VP+ +D+  W +   LTD E+ +  R        +++      +++     
Sbjct: 34  VNNFWLPEKVPVSNDIPSWGT---LTDVEKTLTMRVFTGLTLLDTIQGTVGAVSLIPDAL 90

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            P         AF E+VH+ ++  I ++L
Sbjct: 91  TPHEEAVYTNIAFMESVHAKSYSSIFSTL 119


>gi|326783875|ref|YP_004324269.1| ribonucleotide reductase A subunit [Synechococcus phage S-SSM7]
 gi|310003887|gb|ADO98282.1| ribonucleotide reductase A subunit [Synechococcus phage S-SSM7]
          Length = 388

 Score = 38.5 bits (88), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 3/107 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +Q D + ++S   L  +++ +   NL +    +S+      +A   + + PE 
Sbjct: 59  WRPEEVSLQKDRSDYQS---LRPEQKHIFTSNLKYQILLDSVQGRGPGMAFAPYCALPEL 115

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKAN 160
              +    F E +HS ++ YII ++  +  E+F+   +   I  +AN
Sbjct: 116 EGAMNVWQFMEMIHSRSYTYIIKNVYPNPAEVFDTILDDEKILKRAN 162


>gi|167461830|ref|ZP_02326919.1| ribonucleoside-diphosphate reductase beta subunit [Paenibacillus
           larvae subsp. larvae BRL-230010]
 gi|322383591|ref|ZP_08057349.1| ribonucleotide-diphosphate reductase subunit beta-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
 gi|321152059|gb|EFX44995.1| ribonucleotide-diphosphate reductase subunit beta-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
          Length = 343

 Score = 38.5 bits (88), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 21/87 (24%), Positives = 44/87 (50%), Gaps = 4/87 (4%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           NHW+P+E+PM  D   ++    LT  E+   K+ +G  A  +S+   N V  +  + ++ 
Sbjct: 48  NHWIPSEIPMNKDKLQFEQ---LTAQEQETYKKIIGLLAVLDSM-QTNFVTDVGNYFTDS 103

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSL 138
                      +E +H+ ++ Y+++S+
Sbjct: 104 SLVAIAAIINQQEVIHNQSYSYVLSSI 130


>gi|21233407|ref|NP_639324.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           campestris pv. campestris str. ATCC 33913]
 gi|21115247|gb|AAM43206.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas
           campestris pv. campestris str. ATCC 33913]
          Length = 347

 Score = 38.5 bits (88), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 6/124 (4%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           + Y   +  Y     N W+P EV M+ D    +  N L+  E+      +G  A+ +S  
Sbjct: 37  IPYPSFYRAYKELSTNFWIPDEVDMKGDA---RQYNELSAREKNAYDSIIGLLATLDS-P 92

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL-GL-DEGELFNMYREVPS 154
               +  +  ++++P           +E +H+ ++ Y++ S+ GL D+  +F + R  P+
Sbjct: 93  QTRFIYNVAEYITDPAAHANAAIIGQQEVIHNESYSYVLASITGLADQNRVFEIARTHPT 152

Query: 155 ITAK 158
           I  +
Sbjct: 153 IIKR 156


>gi|323497713|ref|ZP_08102728.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           sinaloensis DSM 21326]
 gi|323317189|gb|EGA70185.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           sinaloensis DSM 21326]
          Length = 377

 Score = 38.5 bits (88), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 3/116 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   N L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSSDRIDY---NKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPEV 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
             ++   +F E +HS ++ +II ++  D G +F+   E   I  +A     Y   L
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIVNDPGIVFDDIVENEHILKRAEDISHYYDDL 161


>gi|260426338|ref|ZP_05780317.1| ribonucleoside-diphosphate reductase, beta subunit [Citreicella sp.
           SE45]
 gi|260420830|gb|EEX14081.1| ribonucleoside-diphosphate reductase, beta subunit [Citreicella sp.
           SE45]
          Length = 324

 Score = 38.5 bits (88), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 10/143 (6%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           N W+P +VP+ +D+  W +   LT +E+ +  R        +++       A+      P
Sbjct: 34  NFWLPEKVPLSNDVPSWAT---LTPEEQRLTIRVFTGLTLLDTIQNAVGAPAMMPDAQTP 90

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANWALQYTQTL 169
                L   AF EAVH+ ++  I ++L    +  E F    E P + AKA   L      
Sbjct: 91  HEEAVLTNIAFMEAVHARSYSSIFSTLCSTREVDEAFRWSDENPHLQAKARAILGTYAPG 150

Query: 170 SSPSFHYWNKRRRSRILTRSLRF 192
           + P      KR+ + +   S  F
Sbjct: 151 ADPL-----KRKVASVFLESFLF 168


>gi|164688728|ref|ZP_02212756.1| hypothetical protein CLOBAR_02375 [Clostridium bartlettii DSM
           16795]
 gi|164602204|gb|EDQ95669.1| hypothetical protein CLOBAR_02375 [Clostridium bartlettii DSM
           16795]
          Length = 327

 Score = 38.5 bits (88), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 6/118 (5%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W+P E+ +  D+ +W     L+ +ER + K+ LG     ++  ANN + ++     N + 
Sbjct: 34  WLPEEISVSKDVKVWSE---LSPEERNLYKKVLGGLTLLDTKQANNGIPSMMSLTDNLQR 90

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYREVPSITAKANWAL-QYTQT 168
           +  L      E +H+ ++  I T+L    +  E+F      P++  KA   L QY  T
Sbjct: 91  KAVLSFMGTMEEIHAKSYSSIFTTLLTVPEIDEIFEWIESEPTLQKKAEIVLAQYENT 148


>gi|315445193|ref|YP_004078072.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Mycobacterium sp. Spyr1]
 gi|315263496|gb|ADU00238.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Mycobacterium sp. Spyr1]
          Length = 320

 Score = 38.5 bits (88), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 28/119 (23%), Positives = 53/119 (44%), Gaps = 7/119 (5%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  W   N LT  E+ +  R        +++      +++     
Sbjct: 28  TGNFWLPEKVPVSNDIPSW---NTLTAHEKQLTMRVFTGLTLLDTIQGTVGAVSLIPDAL 84

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR---EVPSITAKANWALQY 165
            P         AF E+VH+ ++  I ++L     E+ + +R   E P++  KA   +QY
Sbjct: 85  TPHEEAVYTNIAFMESVHARSYSNIFSTL-CSTSEIDDAFRWSEENPNLQRKAEIVMQY 142


>gi|289670858|ref|ZP_06491933.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           campestris pv. musacearum NCPPB4381]
          Length = 349

 Score = 38.5 bits (88), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 6/124 (4%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           + Y   +  Y     N W+P EV M+ D    +  N L+  E+      +G  A+ +S  
Sbjct: 39  IPYPSFYRAYKELSTNFWIPDEVDMKGDA---RQYNELSAREKNAYDSIIGLLATLDS-P 94

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL-GL-DEGELFNMYREVPS 154
               +  +  ++++P           +E +H+ ++ Y++ S+ GL D+  +F + R  P+
Sbjct: 95  QTRFIYNVAEYITDPAAHANAAIIGQQEVIHNESYSYVLASITGLADQNRVFEIARTHPT 154

Query: 155 ITAK 158
           I  +
Sbjct: 155 IIKR 158


>gi|111023403|ref|YP_706375.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus
           jostii RHA1]
 gi|110822933|gb|ABG98217.1| ribonucleotide reductase [Rhodococcus jostii RHA1]
          Length = 321

 Score = 38.5 bits (88), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 5/120 (4%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  W +   LT  E+ +  R        +++      +++     
Sbjct: 29  VGNFWLPEKVPVSNDIPSWGT---LTPQEKQLTMRVFTGLTLLDTIQGTVGAVSLIPDAI 85

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANWALQYTQ 167
            P         AF E+VH+ ++  I ++L    D  + F    E P++  KA   + Y Q
Sbjct: 86  TPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTRDIDDAFRWSEENPNLQRKAEIVMDYYQ 145


>gi|294625675|ref|ZP_06704297.1| ribonucleotide-diphosphate reductase beta subunit [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 11122]
 gi|294664800|ref|ZP_06730124.1| ribonucleotide-diphosphate reductase beta subunit [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 10535]
 gi|292600044|gb|EFF44159.1| ribonucleotide-diphosphate reductase beta subunit [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 11122]
 gi|292605431|gb|EFF48758.1| ribonucleotide-diphosphate reductase beta subunit [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 10535]
          Length = 347

 Score = 38.5 bits (88), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 6/124 (4%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           + Y   +  Y     N W+P EV M+ D    +  N L+  E+      +G  A+ +S  
Sbjct: 37  IPYPSFYRAYKELSTNFWIPDEVDMKGDA---RQYNELSAREKNAYDSIIGLLATLDS-P 92

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL-GL-DEGELFNMYREVPS 154
               +  +  ++++P           +E +H+ ++ Y++ S+ GL D+  +F + R  P+
Sbjct: 93  QTRFIYNVAEYITDPAAHANAAIIGQQEVIHNESYSYVLASITGLADQNRVFEIARTHPT 152

Query: 155 ITAK 158
           I  +
Sbjct: 153 IIKR 156


>gi|188578920|ref|YP_001915849.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           oryzae pv. oryzae PXO99A]
 gi|188523372|gb|ACD61317.1| ribonucleoside-diphosphate reductase, beta subunit [Xanthomonas
           oryzae pv. oryzae PXO99A]
          Length = 347

 Score = 38.5 bits (88), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 6/124 (4%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           + Y   +  Y     N W+P EV M+ D    +  N L+  E+      +G  A+ +S  
Sbjct: 37  IPYPSFYRAYKELSTNFWIPDEVDMKGDA---RQYNELSAREKNAYDSIIGLLATLDS-P 92

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL-GL-DEGELFNMYREVPS 154
               +  +  ++++P           +E +H+ ++ Y++ S+ GL D+  +F + R  P+
Sbjct: 93  QTRFIYNVAEYITDPAAHANAAIIGQQEVIHNESYSYVLASITGLADQNRVFEIARTHPT 152

Query: 155 ITAK 158
           I  +
Sbjct: 153 IIKR 156


>gi|21244791|ref|NP_644373.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           axonopodis pv. citri str. 306]
 gi|325927516|ref|ZP_08188754.1| ribonucleotide reductase, beta subunit [Xanthomonas perforans
           91-118]
 gi|21110489|gb|AAM38909.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas
           axonopodis pv. citri str. 306]
 gi|325542109|gb|EGD13613.1| ribonucleotide reductase, beta subunit [Xanthomonas perforans
           91-118]
          Length = 347

 Score = 38.5 bits (88), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 6/124 (4%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           + Y   +  Y     N W+P EV M+ D    +  N L+  E+      +G  A+ +S  
Sbjct: 37  IPYPSFYRAYKELSTNFWIPDEVDMKGDA---RQYNELSAREKNAYDSIIGLLATLDS-P 92

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL-GL-DEGELFNMYREVPS 154
               +  +  ++++P           +E +H+ ++ Y++ S+ GL D+  +F + R  P+
Sbjct: 93  QTRFIYNVAEYITDPAAHANAAIIGQQEVIHNESYSYVLASITGLADQNRVFEIARTHPT 152

Query: 155 ITAK 158
           I  +
Sbjct: 153 IIKR 156


>gi|166710317|ref|ZP_02241524.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           oryzae pv. oryzicola BLS256]
          Length = 347

 Score = 38.1 bits (87), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 6/124 (4%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           + Y   +  Y     N W+P EV M+ D    +  N L+  E+      +G  A+ +S  
Sbjct: 37  IPYPSFYRAYKELSTNFWIPDEVDMKGDA---RQYNELSAREKNAYDSIIGLLATLDS-P 92

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL-GL-DEGELFNMYREVPS 154
               +  +  ++++P           +E +H+ ++ Y++ S+ GL D+  +F + R  P+
Sbjct: 93  QTRFIYNVAEYITDPAAHANAAIIGQQEVIHNESYSYVLASITGLADQNRVFEIARTHPT 152

Query: 155 ITAK 158
           I  +
Sbjct: 153 IIKR 156


>gi|289664735|ref|ZP_06486316.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           campestris pv. vasculorum NCPPB702]
          Length = 349

 Score = 38.1 bits (87), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 6/124 (4%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           + Y   +  Y     N W+P EV M+ D    +  N L+  E+      +G  A+ +S  
Sbjct: 39  IPYPSFYRAYKELSTNFWIPDEVDMKGDA---RQYNELSAREKNAYDSIIGLLATLDS-P 94

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL-GL-DEGELFNMYREVPS 154
               +  +  ++++P           +E +H+ ++ Y++ S+ GL D+  +F + R  P+
Sbjct: 95  QTRFIYNVAEYITDPAAHANAAIIGQQEVIHNESYSYVLASITGLADQNRVFEIARTHPT 154

Query: 155 ITAK 158
           I  +
Sbjct: 155 IIKR 158


>gi|145224865|ref|YP_001135543.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           gilvum PYR-GCK]
 gi|145217351|gb|ABP46755.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Mycobacterium gilvum PYR-GCK]
          Length = 320

 Score = 38.1 bits (87), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 28/119 (23%), Positives = 53/119 (44%), Gaps = 7/119 (5%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  W   N LT  E+ +  R        +++      +++     
Sbjct: 28  TGNFWLPEKVPVSNDIPSW---NTLTAHEKQLTMRVFTGLTLLDTIQGTVGAVSLIPDAL 84

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR---EVPSITAKANWALQY 165
            P         AF E+VH+ ++  I ++L     E+ + +R   E P++  KA   +QY
Sbjct: 85  TPHEEAVYTNIAFMESVHARSYSNIFSTL-CSTSEIDDAFRWSEENPNLQRKAEIVMQY 142


>gi|58580098|ref|YP_199114.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           oryzae pv. oryzae KACC10331]
 gi|84622097|ref|YP_449469.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           oryzae pv. oryzae MAFF 311018]
 gi|58424692|gb|AAW73729.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas oryzae
           pv. oryzae KACC10331]
 gi|84366037|dbj|BAE67195.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas oryzae
           pv. oryzae MAFF 311018]
          Length = 347

 Score = 38.1 bits (87), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 6/124 (4%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           + Y   +  Y     N W+P EV M+ D    +  N L+  E+      +G  A+ +S  
Sbjct: 37  IPYPSFYRAYKELSTNFWIPDEVDMKGDA---RQYNELSAREKNAYDSIIGLLATLDS-P 92

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL-GL-DEGELFNMYREVPS 154
               +  +  ++++P           +E +H+ ++ Y++ S+ GL D+  +F + R  P+
Sbjct: 93  QTRFIYNVAEYITDPAAHANAAIIGQQEVIHNESYSYVLASITGLADQNRVFEIARTHPT 152

Query: 155 ITAK 158
           I  +
Sbjct: 153 IIKR 156


>gi|296167463|ref|ZP_06849862.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           parascrofulaceum ATCC BAA-614]
 gi|295897211|gb|EFG76818.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           parascrofulaceum ATCC BAA-614]
          Length = 305

 Score = 38.1 bits (87), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 6/103 (5%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNI--VLAIYRHLSNP 111
           W P ++    D A W+    LT+DER    R    F + E  V  +I   ++  R     
Sbjct: 24  WNPADIDFSRDRADWEQ---LTEDERHYAIRLCAEFIAGEEAVTEDIQPFMSAMRVEGRL 80

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPS 154
               YL + AFEEA H   F+  + ++G+ E +L     ++P+
Sbjct: 81  GDEMYLTQFAFEEAKHVQVFRMWLDAVGVTE-DLHQYLDDIPT 122


>gi|78049716|ref|YP_365891.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
 gi|78038146|emb|CAJ25891.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
          Length = 347

 Score = 38.1 bits (87), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 6/124 (4%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           + Y   +  Y     N W+P EV M+ D    +  N L+  E+      +G  A+ +S  
Sbjct: 37  IPYPSFYRAYKELSTNFWIPDEVDMKGDA---RQYNELSAREKNAYDSIIGLLATLDS-P 92

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL-GL-DEGELFNMYREVPS 154
               +  +  ++++P           +E +H+ ++ Y++ S+ GL D+  +F + R  P+
Sbjct: 93  QTRFIYNVAEYITDPAAHANAAIIGQQEVIHNESYSYVLASITGLADQNRVFEIARTHPT 152

Query: 155 ITAK 158
           I  +
Sbjct: 153 IIKR 156


>gi|315654326|ref|ZP_07907234.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           curtisii ATCC 51333]
 gi|315657771|ref|ZP_07910651.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           curtisii subsp. holmesii ATCC 35242]
 gi|315491361|gb|EFU80978.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           curtisii ATCC 51333]
 gi|315491568|gb|EFU81179.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           curtisii subsp. holmesii ATCC 35242]
          Length = 322

 Score = 38.1 bits (87), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 27/118 (22%), Positives = 51/118 (43%), Gaps = 5/118 (4%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P ++P+ +D+  WK+   L +DE+ M  R        +++      +++     
Sbjct: 30  TGNFWLPEKIPLSNDIPSWKT---LNEDEKNMTNRVFTGLTLLDTIQGTVGAVSLIPDSR 86

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQY 165
            P         AF E+VH+ ++  + ++L   E   E F    E   +  KA+  L Y
Sbjct: 87  TPHEEAVYTNIAFMESVHAKSYSSVFSTLLSTEEINESFRWSEENEYLQKKAHIVLDY 144


>gi|226365904|ref|YP_002783687.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus
           opacus B4]
 gi|226244394|dbj|BAH54742.1| ribonucleoside-diphosphate reductase beta chain [Rhodococcus opacus
           B4]
          Length = 321

 Score = 38.1 bits (87), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 5/120 (4%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  W +   LT  E+ +  R        +++      +++     
Sbjct: 29  VGNFWLPEKVPVSNDIPSWGT---LTAQEKQLTMRVFTGLTLLDTIQGTVGAVSLIPDAI 85

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANWALQYTQ 167
            P         AF E+VH+ ++  I ++L    D  + F    E P++  KA   + Y Q
Sbjct: 86  TPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTRDIDDAFRWSEENPNLQRKAEIVMDYYQ 145


>gi|229542075|ref|ZP_04431135.1| Ribonucleoside-diphosphate reductase [Bacillus coagulans 36D1]
 gi|229326495|gb|EEN92170.1| Ribonucleoside-diphosphate reductase [Bacillus coagulans 36D1]
          Length = 347

 Score = 38.1 bits (87), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 6/121 (4%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           L Y   ++ Y     N+W   EV M  D+   K    L++ E+    + +   A+ +S  
Sbjct: 37  LAYPHWYKTYKRLLGNYWQSDEVNMSTDV---KQFPLLSEKEQETFLKIISLLATLDSSQ 93

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS-LGLD-EGELFNMYREVPS 154
              I+LA   + ++P  +  L   A +EAVH+ ++ YI++S + LD + E F + R+ P 
Sbjct: 94  TRTILLASL-YATDPSIQSILAVIAQQEAVHNESYSYILSSVVSLDKQNEAFEIGRKDPV 152

Query: 155 I 155
           +
Sbjct: 153 L 153


>gi|294140834|ref|YP_003556812.1| ribonucleoside-diphosphate reductase subunit beta [Shewanella
           violacea DSS12]
 gi|293327303|dbj|BAJ02034.1| ribonucleoside-diphosphate reductase, beta subunit [Shewanella
           violacea DSS12]
          Length = 376

 Score = 38.1 bits (87), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 20/176 (11%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSA-CNNHWMPTEVPM 61
           NN  L P+  G+  VNV       AR DV      KY   +EK +    +  W P EV +
Sbjct: 11  NNARLEPMFMGQS-VNV-------ARYDVQ-----KYE-VFEKLIEKQLSFFWRPEEVDV 56

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D   + +   L D E+ +   NL +    +S+   +  +A    +S PE   ++   +
Sbjct: 57  SKDKIDYAA---LPDHEKHIFISNLKYQTLLDSIQGRSPNVAFLPLVSLPELETWIETWS 113

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLS--SPSFH 175
           F E +HS ++ +II ++  D   +F+   E   I  +A    QY   L   + +FH
Sbjct: 114 FSETIHSRSYTHIIRNIVNDPSIIFDDIVENEEILKRATDIAQYYDDLILLTQAFH 169


>gi|261253084|ref|ZP_05945657.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           orientalis CIP 102891]
 gi|260936475|gb|EEX92464.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           orientalis CIP 102891]
          Length = 377

 Score = 38.1 bits (87), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 3/106 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   N L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSSDRIDY---NKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPEV 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKA 159
             ++   +F E +HS ++ +II ++  D G +F+   E   I  +A
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIVNDPGLVFDDIVENEHILKRA 151


>gi|298345735|ref|YP_003718422.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           curtisii ATCC 43063]
 gi|304390565|ref|ZP_07372518.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           curtisii subsp. curtisii ATCC 35241]
 gi|298235796|gb|ADI66928.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           curtisii ATCC 43063]
 gi|304326321|gb|EFL93566.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           curtisii subsp. curtisii ATCC 35241]
          Length = 322

 Score = 38.1 bits (87), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 32/145 (22%), Positives = 59/145 (40%), Gaps = 11/145 (7%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P ++P+ +D+  WK+   L +DE+ M  R        +++      +++     
Sbjct: 30  TGNFWLPEKIPLSNDIPSWKT---LNEDEKNMTNRVFTGLTLLDTIQGTVGAVSLIPDSR 86

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQ 167
            P         AF E+VH+ ++  + ++L   E   E F    E   +  KA+  L Y  
Sbjct: 87  TPHEEAVYTNIAFMESVHAKSYSSVFSTLLSTEEIKESFRWSEENEYLQKKAHIVLDYYH 146

Query: 168 TLSSPSFHYWNKRRRSRILTRSLRF 192
              S       KR+ +  +  S  F
Sbjct: 147 GNDS------EKRKVASTMLESFLF 165


>gi|52143985|ref|YP_082843.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus
           E33L]
 gi|228984529|ref|ZP_04144706.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|229155020|ref|ZP_04283134.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           ATCC 4342]
 gi|51977454|gb|AAU19004.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           E33L]
 gi|157955324|gb|ABW06037.1| NrdF [Bacillus thuringiensis serovar tochigiensis]
 gi|228628578|gb|EEK85291.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           ATCC 4342]
 gi|228775232|gb|EEM23621.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
          Length = 322

 Score = 38.1 bits (87), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 5/121 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W   E+ +  D   W     L+ +E++  KR LG     ++      +  +  HL N + 
Sbjct: 26  WTEEEIAVSSDKNTWAQ---LSKEEQVAYKRVLGGLTLLDTKQGGEGMPLVLVHLENLQA 82

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSS 171
           +  L      E VH+ ++ +I T+L  +E   E+F+     P +  KA     Y + L  
Sbjct: 83  KSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDEIFDWVDTHPLLEKKAGIITSYYRRLLK 142

Query: 172 P 172
           P
Sbjct: 143 P 143


>gi|319938784|ref|ZP_08013148.1| ribonucleoside-diphosphate reductase [Streptococcus anginosus
           1_2_62CV]
 gi|319811834|gb|EFW08100.1| ribonucleoside-diphosphate reductase [Streptococcus anginosus
           1_2_62CV]
          Length = 319

 Score = 38.1 bits (87), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L+ +E+ ++ +  G     +++ + + V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSPEEKDLVGKVFGGLTLLDTMQSQSGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            AI   +  P     L    F E+VH+ ++  I ++L
Sbjct: 75  EAIRGDIRTPHEEAVLNNIQFMESVHAKSYSSIFSTL 111


>gi|296117839|ref|ZP_06836422.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           ammoniagenes DSM 20306]
 gi|295969070|gb|EFG82312.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           ammoniagenes DSM 20306]
          Length = 328

 Score = 38.1 bits (87), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 19/90 (21%), Positives = 39/90 (43%), Gaps = 3/90 (3%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P ++P+ +D+  W++      D  L +   L    + +  V     +++  H  
Sbjct: 37  TTNFWLPEKIPVSNDVQSWRNMTAQEQDATLKVFTGLTVLDTLQGTVG---AVSLIPHAV 93

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
            P+        AF E+VH+ ++  I  +L 
Sbjct: 94  TPQEEAVYTNIAFMESVHAKSYSNIFMTLA 123


>gi|323359290|ref|YP_004225686.1| ribonucleotide reductase, beta subunit [Microbacterium testaceum
           StLB037]
 gi|323275661|dbj|BAJ75806.1| ribonucleotide reductase, beta subunit [Microbacterium testaceum
           StLB037]
          Length = 324

 Score = 38.1 bits (87), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 3/89 (3%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
            NN W+P +VP+ +D+  W   N LT +E+ +  R        +++      +++     
Sbjct: 32  VNNFWLPEKVPLSNDIQSW---NTLTPEEQTLTMRVFTGLTLLDTIQGTVGAVSLIPDAI 88

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            P         AF E+VH+ ++  I ++L
Sbjct: 89  TPHEEAVYTNIAFMESVHAKSYSSIFSTL 117


>gi|308049658|ref|YP_003913224.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Ferrimonas balearica DSM 9799]
 gi|307631848|gb|ADN76150.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Ferrimonas balearica DSM 9799]
          Length = 378

 Score = 38.1 bits (87), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 3/116 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   N L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 51  WRPEEVDVTQDRIDY---NALPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPEL 107

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
             ++   +F E +HS ++ +II ++  D G +F+       I  +A+   QY   L
Sbjct: 108 ETWIETWSFYETIHSRSYTHIIRNIVNDPGVVFDDIVVNEEIQKRASDISQYYDDL 163


>gi|261885428|ref|ZP_06009467.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           fetus subsp. venerealis str. Azul-94]
          Length = 282

 Score = 38.1 bits (87), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 11/106 (10%)

Query: 38  KYGWAWEKYLSACNNHW-----MPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
           KY WA    L    + W      P EV   DD+  +     LT  ++ M         S 
Sbjct: 35  KYTWA----LKLLGSLWKQIPGFPKEVDTTDDVRDYAC--NLTTAKKRMYDLVWSQLISM 88

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           +S   NN+   I  +++ PE    L RQA+EEA HS ++  ++ ++
Sbjct: 89  DSFQTNNLADNINPYITAPEINAILARQAYEEANHSKSYAVMVEAI 134


>gi|327394563|dbj|BAK11985.1| ribonucleoside-diphosphate reductase 1 beta subunit NrdB [Pantoea
           ananatis AJ13355]
          Length = 376

 Score = 38.1 bits (87), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 4/125 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +++   L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSRDRIDYQA---LPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
             ++   AF E +HS ++ +II ++  D   +F+       I A+A    QY   L   +
Sbjct: 106 ETWIETWAFSETIHSRSYTHIIRNIVNDPAVVFDDIVTNQQILARAQDISQYYDDLIEMT 165

Query: 174 FHYWN 178
             YW+
Sbjct: 166 -SYWH 169


>gi|212712302|ref|ZP_03320430.1| hypothetical protein PROVALCAL_03388 [Providencia alcalifaciens DSM
           30120]
 gi|212685048|gb|EEB44576.1| hypothetical protein PROVALCAL_03388 [Providencia alcalifaciens DSM
           30120]
          Length = 380

 Score = 38.1 bits (87), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 76/174 (43%), Gaps = 16/174 (9%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           NN  L P+  G+  VNV       AR D  Q  P+ +    EK LS     W P EV + 
Sbjct: 15  NNQLLEPMFFGQP-VNV-------ARFD-QQKYPI-FEKLIEKQLSF---FWRPEEVDVA 61

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D   +   N L D E+ +   NL +    +S+   +  +A    +S PE   ++   +F
Sbjct: 62  RDRIDY---NALPDHEKHIFISNLKYQTLLDSIQGRSPNVAFLPLISIPELETWVETWSF 118

Query: 123 EEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHY 176
            E +HS ++ +II ++  D   +F+   E   I  +A     Y  TL   + +Y
Sbjct: 119 SETIHSRSYTHIIRNIVNDPAIIFDDIVENEEILKRARDISAYYDTLIEMTNYY 172


>gi|228990454|ref|ZP_04150419.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           pseudomycoides DSM 12442]
 gi|228996556|ref|ZP_04156195.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
           Rock3-17]
 gi|229004206|ref|ZP_04162007.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
           Rock1-4]
 gi|228757067|gb|EEM06311.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
           Rock1-4]
 gi|228763188|gb|EEM12096.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
           Rock3-17]
 gi|228768980|gb|EEM17578.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           pseudomycoides DSM 12442]
          Length = 322

 Score = 37.7 bits (86), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 5/121 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W   E+ +  D   W     L+ +E+++ KR LG     ++      +  +  HL N + 
Sbjct: 26  WTEEEIAVSSDKNTWVQ---LSKEEQIVYKRVLGGLTLLDTKQGGEGMPLVLVHLENLQA 82

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSS 171
           +  L      E VH+ ++ +I T+L  +E   E+F      P +  KA     Y + L  
Sbjct: 83  KSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDEIFEWVDSHPLLEKKAGIITGYYRRLLK 142

Query: 172 P 172
           P
Sbjct: 143 P 143


>gi|228926484|ref|ZP_04089556.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|228833308|gb|EEM78873.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
          Length = 322

 Score = 37.7 bits (86), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 5/121 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W   E+ +  D   W     L+ +E++  KR LG     ++      +  +  HL N + 
Sbjct: 26  WTEEEIAVSSDKNTWVQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLVLVHLENLQA 82

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSS 171
           +  L      E VH+ ++ +I T+L  +E   E+F+     P +  KA     Y + L  
Sbjct: 83  KSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDEIFDWVDTHPLLEKKAGIITSYYRRLLK 142

Query: 172 P 172
           P
Sbjct: 143 P 143


>gi|315223183|ref|ZP_07865044.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           anginosus F0211]
 gi|315187615|gb|EFU21369.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           anginosus F0211]
          Length = 319

 Score = 37.7 bits (86), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L+ +E+ ++ +  G     +++ + + V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSPEEKDLVGKVFGGLTLLDTMQSQSGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            AI   +  P     L    F E+VH+ ++  I ++L
Sbjct: 75  EAIRGDIRTPHEEAVLNNIQFMESVHAKSYSSIFSTL 111


>gi|30261453|ref|NP_843830.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. Ames]
 gi|47526645|ref|YP_017994.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49184287|ref|YP_027539.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. Sterne]
 gi|49477196|ref|YP_035577.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|65318723|ref|ZP_00391682.1| COG0208: Ribonucleotide reductase, beta subunit [Bacillus anthracis
           str. A2012]
 gi|118476922|ref|YP_894073.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           thuringiensis str. Al Hakam]
 gi|165870361|ref|ZP_02215016.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0488]
 gi|167634337|ref|ZP_02392658.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0442]
 gi|167639338|ref|ZP_02397610.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0193]
 gi|170686782|ref|ZP_02878002.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0465]
 gi|170706310|ref|ZP_02896771.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0389]
 gi|177651561|ref|ZP_02934350.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0174]
 gi|190568085|ref|ZP_03020995.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis Tsiankovskii-I]
 gi|196035278|ref|ZP_03102683.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           W]
 gi|196046555|ref|ZP_03113780.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           03BB108]
 gi|218902561|ref|YP_002450395.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           AH820]
 gi|225863317|ref|YP_002748695.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           03BB102]
 gi|227815798|ref|YP_002815807.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. CDC 684]
 gi|228914025|ref|ZP_04077647.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|228932735|ref|ZP_04095607.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228945050|ref|ZP_04107411.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|229090407|ref|ZP_04221650.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-42]
 gi|229120993|ref|ZP_04250235.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           95/8201]
 gi|229183646|ref|ZP_04310869.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BGSC 6E1]
 gi|229602752|ref|YP_002865867.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0248]
 gi|254682483|ref|ZP_05146344.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. CNEVA-9066]
 gi|254726146|ref|ZP_05187928.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. A1055]
 gi|254733899|ref|ZP_05191613.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. Western North America USA6153]
 gi|254740411|ref|ZP_05198102.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. Kruger B]
 gi|254753802|ref|ZP_05205837.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. Vollum]
 gi|254758897|ref|ZP_05210924.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. Australia 94]
 gi|301052993|ref|YP_003791204.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis CI]
 gi|30255307|gb|AAP25316.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. Ames]
 gi|47501793|gb|AAT30469.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49178214|gb|AAT53590.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. Sterne]
 gi|49328752|gb|AAT59398.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|72414680|emb|CAG28950.1| ribonucleoside-diphosphate reductase class Ib beta chain [Bacillus
           anthracis]
 gi|118416147|gb|ABK84566.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Bacillus thuringiensis str. Al Hakam]
 gi|157955314|gb|ABW06029.1| NrdF [Bacillus thuringiensis serovar finitimus]
 gi|164713856|gb|EDR19378.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0488]
 gi|167512777|gb|EDR88151.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0193]
 gi|167530225|gb|EDR92951.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0442]
 gi|170128844|gb|EDS97710.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0389]
 gi|170669305|gb|EDT20048.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0465]
 gi|172082839|gb|EDT67902.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0174]
 gi|190560819|gb|EDV14794.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis Tsiankovskii-I]
 gi|195991955|gb|EDX55918.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           W]
 gi|196022739|gb|EDX61421.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           03BB108]
 gi|218537212|gb|ACK89610.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           AH820]
 gi|225785957|gb|ACO26174.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           03BB102]
 gi|227004217|gb|ACP13960.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. CDC 684]
 gi|228599889|gb|EEK57486.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BGSC 6E1]
 gi|228662653|gb|EEL18251.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           95/8201]
 gi|228692990|gb|EEL46708.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-42]
 gi|228814719|gb|EEM60979.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228826940|gb|EEM72702.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228845630|gb|EEM90659.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|229267160|gb|ACQ48797.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0248]
 gi|300375162|gb|ADK04066.1| ribonucleotide-diphosphate reductase beta subunit [Bacillus cereus
           biovar anthracis str. CI]
 gi|324325470|gb|ADY20730.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 322

 Score = 37.7 bits (86), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 5/121 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W   E+ +  D   W     L+ +E++  KR LG     ++      +  +  HL N + 
Sbjct: 26  WTEEEIAVSSDKNTWVQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLVLVHLENLQA 82

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSS 171
           +  L      E VH+ ++ +I T+L  +E   E+F+     P +  KA     Y + L  
Sbjct: 83  KSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDEIFDWVDTHPLLEKKAGIITSYYRRLLK 142

Query: 172 P 172
           P
Sbjct: 143 P 143


>gi|226305840|ref|YP_002765800.1| ribonucleoside-diphosphate reductase beta chain [Rhodococcus
           erythropolis PR4]
 gi|229493405|ref|ZP_04387194.1| ribonucleoside-diphosphate reductase, beta subunit [Rhodococcus
           erythropolis SK121]
 gi|226184957|dbj|BAH33061.1| ribonucleoside-diphosphate reductase beta chain [Rhodococcus
           erythropolis PR4]
 gi|229319721|gb|EEN85553.1| ribonucleoside-diphosphate reductase, beta subunit [Rhodococcus
           erythropolis SK121]
          Length = 321

 Score = 37.7 bits (86), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 64/153 (41%), Gaps = 14/153 (9%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            W++ +S   N W+P +VP+ +D+  W +   LT  E+ +  R        +++      
Sbjct: 24  VWDRLVS---NFWLPEKVPVSNDIPSWGT---LTAQEQQLTMRVFTGLTLLDTIQGTVGA 77

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKA 159
           +++      P         AF E+VH+ ++  I ++L    D  + F    E P++  KA
Sbjct: 78  VSLIPDAITPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTPDIDDAFRWSEENPNLQRKA 137

Query: 160 NWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
              L Y     SP      KR+ +  L  S  F
Sbjct: 138 QIVLDYYNG-ESPL-----KRKVASTLLESFLF 164


>gi|157311531|ref|YP_001469574.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           Phi1]
 gi|149380735|gb|ABR24740.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           Phi1]
          Length = 386

 Score = 37.7 bits (86), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 31/149 (20%), Positives = 58/149 (38%), Gaps = 12/149 (8%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P E+ +  D   + +   + D E+     NL +    +S+       A    +S+P  
Sbjct: 47  WRPEEISLATDRIQYLN---MGDVEKRFFTENLKYQTLLDSIQGRAPSAAFGPIVSDPTL 103

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL---- 169
             +L    F E +HS ++ +I+ +  +D    F+   + P+I  +A    QY   +    
Sbjct: 104 DTWLQTWTFSETIHSRSYTHIMRNCFIDPASEFDQIIDNPAIMKRAESIGQYYDDVLYWI 163

Query: 170 -----SSPSFHYWNKRRRSRILTRSLRFL 193
                +     YW +R     L  + RF 
Sbjct: 164 RKYENAKEDLRYWEERDDHTALDDARRFF 192


>gi|149197800|ref|ZP_01874849.1| ribonucleotide-diphosphate reductase beta subunit [Lentisphaera
           araneosa HTCC2155]
 gi|149139021|gb|EDM27425.1| ribonucleotide-diphosphate reductase beta subunit [Lentisphaera
           araneosa HTCC2155]
          Length = 376

 Score = 37.7 bits (86), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 3/116 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D A +K    L   E+ +   NL +    +S+   +  +A    +S PE 
Sbjct: 49  WRPEEVDLSRDRADFKK---LPAHEKHIFLSNLKYQTLLDSVQGRSPNVAFLPVISIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
             ++   AF E +HS ++ +II ++  D  E+F+      SI  +A+    Y  + 
Sbjct: 106 ETWVETWAFSETIHSRSYTHIIRNIVNDPSEIFDDIVNNESIIQRASSVSHYYDSF 161


>gi|291618170|ref|YP_003520912.1| NrdB [Pantoea ananatis LMG 20103]
 gi|291153200|gb|ADD77784.1| NrdB [Pantoea ananatis LMG 20103]
          Length = 387

 Score = 37.7 bits (86), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 4/125 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +++   L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 60  WRPEEVDVSRDRIDYQA---LPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPEL 116

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
             ++   AF E +HS ++ +II ++  D   +F+       I A+A    QY   L   +
Sbjct: 117 ETWIETWAFSETIHSRSYTHIIRNIVNDPAVVFDDIVTNQQILARAQDISQYYDDLIEMT 176

Query: 174 FHYWN 178
             YW+
Sbjct: 177 -SYWH 180


>gi|255656920|ref|ZP_05402329.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile QCD-23m63]
 gi|296452239|ref|ZP_06893946.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           difficile NAP08]
 gi|296877591|ref|ZP_06901622.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           difficile NAP07]
 gi|296258926|gb|EFH05814.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           difficile NAP08]
 gi|296431442|gb|EFH17258.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           difficile NAP07]
          Length = 323

 Score = 37.7 bits (86), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 6/125 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W+P E+ +  D+ +W   N L++ E+ + K+ LG     ++   NN + ++     N + 
Sbjct: 34  WLPEEISVSKDIKIW---NELSNKEKELYKKVLGGLTLLDTKQGNNGIPSMMSLTENLQR 90

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANWAL-QYTQTLS 170
           +  L      E +H+ ++  I  +L    +  ELF      P++  KA+  L QY  T +
Sbjct: 91  KAVLSFMGTMEEIHAKSYSSIFMTLLSNSEIDELFEWIETEPTLQRKADLVLAQYENTTN 150

Query: 171 SPSFH 175
               +
Sbjct: 151 QEGLY 155


>gi|61806080|ref|YP_214440.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM2]
 gi|61374589|gb|AAX44586.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM2]
 gi|265525292|gb|ACY76089.1| NrdB [Prochlorococcus phage P-SSM2]
          Length = 384

 Score = 37.7 bits (86), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 3/94 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +Q D   +++   L  +++ +   NL +    +S+      +A   + S PE 
Sbjct: 53  WRPEEVSLQKDRGDYQT---LRPEQKHIYTSNLKYQIMLDSVQGRAPGMAFLPYCSLPEL 109

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFN 147
              +   +F E +HS ++ Y+I ++  D  E+F+
Sbjct: 110 EACMEVWSFMEMIHSRSYTYVIKNVYADPSEVFD 143


>gi|229084444|ref|ZP_04216723.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-44]
 gi|228698872|gb|EEL51578.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-44]
          Length = 322

 Score = 37.7 bits (86), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 5/121 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W   E+ +  D   W     L+ +E++  KR LG     ++      +  +  HL N + 
Sbjct: 26  WTEEEIAVSSDKNTWAQ---LSREEQIAYKRVLGGLTLLDTKQGGEGMPLVLVHLENLQA 82

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSS 171
           +  L      E VH+ ++ +I T+L  +E   E+F+     P +  KA     Y + L  
Sbjct: 83  KSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDEIFDWVDSHPLLEKKAGIITGYYRRLLK 142

Query: 172 P 172
           P
Sbjct: 143 P 143


>gi|161502142|ref|YP_001569254.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. arizonae serovar 62:z4,z23:-- str.
           RSK2980]
 gi|160863489|gb|ABX20112.1| hypothetical protein SARI_00165 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 319

 Score = 37.7 bits (86), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 19/97 (19%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF--------FASSESLVANNIV 101
            +N W+P +VP+ +D+  W++ N    +++L I+   G          A + SL+A+ I 
Sbjct: 27  TSNFWLPEKVPLSNDIPAWQTLNAA--EQQLTIRVFTGLTLLDTIQNIAGAPSLMADAIT 84

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
                    P     L   +F EAVH+ ++  I ++L
Sbjct: 85  ---------PHEEAVLSNISFMEAVHARSYSSIFSTL 112


>gi|119961248|ref|YP_948075.1| ribonucleotide-diphosphate reductase subunit beta [Arthrobacter
           aurescens TC1]
 gi|119948107|gb|ABM07018.1| ribonucleoside-diphosphate reductase beta chain [Arthrobacter
           aurescens TC1]
          Length = 324

 Score = 37.7 bits (86), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 7/121 (5%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
            NN W+P +VP+ +D+  W +   LT DE+ +  R        +++      +++     
Sbjct: 32  VNNFWLPEKVPLSNDVQSWHT---LTPDEQQLTMRVFTGLTLLDTIQGTVGAVSLIPDAI 88

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR---EVPSITAKANWALQYT 166
            P         AF E+VH+ ++  I ++L     E+ + +R   E  ++  KA   + Y 
Sbjct: 89  TPHEEAVYTNIAFMESVHAKSYSSIFSTL-CSTKEIDDAFRWSLENENLQKKAQIVMDYY 147

Query: 167 Q 167
           Q
Sbjct: 148 Q 148


>gi|227833759|ref|YP_002835466.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           aurimucosum ATCC 700975]
 gi|262184833|ref|ZP_06044254.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           aurimucosum ATCC 700975]
 gi|227454775|gb|ACP33528.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 328

 Score = 37.7 bits (86), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 25/115 (21%), Positives = 45/115 (39%), Gaps = 14/115 (12%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
            +N W+P +VP+ +D+  WK  +       + +   L    + +  V     L+I    +
Sbjct: 36  TSNFWLPEKVPVSNDIPTWKIMDEAEQWATMQVFTGLTMLDTMQGTVG---ALSILPDAA 92

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ 164
            P         AF E+VH+ ++  I  +L            + P+I    NW  Q
Sbjct: 93  TPHEEAVYTNIAFMESVHAKSYSNIFMTLA-----------DTPTINHAFNWGRQ 136


>gi|302321458|gb|ADL16651.1| RNR2 [Abalone herpesvirus Victoria/AUS/2007]
          Length = 642

 Score = 37.7 bits (86), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 10/97 (10%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSN- 110
           N W   E+    DLA+W     L +  R  IK  L F A  + +V      AI  H+SN 
Sbjct: 87  NQWKANEIEPSKDLAVWVD---LPEPVRKCIKGALTFVAVGDIVVKE----AIPMHMSNF 139

Query: 111 --PECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL 145
              EC ++   Q   E+ H   +   +T+   ++ EL
Sbjct: 140 PLTECGKFFQEQLINESEHQKLYTKFLTTFAHNKEEL 176


>gi|54309624|ref|YP_130644.1| ribonucleotide-diphosphate reductase subunit beta [Photobacterium
           profundum SS9]
 gi|46914062|emb|CAG20842.1| putative ribonucleoside-diphosphate reductase,beta subunit
           [Photobacterium profundum SS9]
          Length = 377

 Score = 37.7 bits (86), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 3/123 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   N L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSGDRIDY---NNLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPIVSIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
             ++   +F E +HS ++ +II ++  D   +F+   E   I  +A    +Y   L + +
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIVNDPAIVFDDIVENEYIIKRAGDISKYYDDLIAAT 165

Query: 174 FHY 176
             Y
Sbjct: 166 SDY 168


>gi|311278798|ref|YP_003941029.1| Ribonucleoside-diphosphate reductase [Enterobacter cloacae SCF1]
 gi|308747993|gb|ADO47745.1| Ribonucleoside-diphosphate reductase [Enterobacter cloacae SCF1]
          Length = 376

 Score = 37.7 bits (86), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 58/125 (46%), Gaps = 4/125 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +++   L + E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSRDRIDYQA---LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
             ++   AF E +HS ++ +II ++  D   +F+       I  +A    QY  TL   +
Sbjct: 106 ETWVETWAFSETIHSRSYTHIIRNIVNDPATVFDDIVTNEQIQKRAEGISQYYDTLIELT 165

Query: 174 FHYWN 178
             YW+
Sbjct: 166 -SYWH 169


>gi|296104353|ref|YP_003614499.1| ribonucleotide-diphosphate reductase subunit beta [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295058812|gb|ADF63550.1| ribonucleotide-diphosphate reductase subunit beta [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 319

 Score = 37.7 bits (86), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 27/121 (22%), Positives = 53/121 (43%), Gaps = 5/121 (4%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
            +N W+P +VP+ +D+  W++ +       + +   L    + ++ V    ++A      
Sbjct: 27  TSNFWLPEKVPLSNDIPAWQTLSHAEQQLTIRVFTGLTLLDTIQNTVGAPALMA---DAL 83

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANWALQYTQ 167
            P     +   +F EAVH+ ++  I ++L    D    ++   E  S+  KAN  L Y Q
Sbjct: 84  TPHEEAVMSNISFMEAVHARSYSSIFSTLCQTKDVDAAYSWSEESESLQRKANLVLDYYQ 143

Query: 168 T 168
            
Sbjct: 144 A 144


>gi|283786769|ref|YP_003366634.1| ribonucleoside-diphosphate reductase 2 beta chain [Citrobacter
           rodentium ICC168]
 gi|282950223|emb|CBG89859.1| ribonucleoside-diphosphate reductase 2 beta chain [Citrobacter
           rodentium ICC168]
          Length = 319

 Score = 37.7 bits (86), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 19/97 (19%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF--------FASSESLVANNIV 101
            +N W+P +VP+ +D+  W+S N    +++L I+   G          A + SL+A+ + 
Sbjct: 27  TSNFWLPEKVPLSNDIPAWQSLNAA--EQQLTIRVFTGLTLLDTIQNIAGAPSLMADALT 84

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
                    P     L   +F EAVH+ ++  I ++L
Sbjct: 85  ---------PHEEAVLSNISFMEAVHARSYSSIFSTL 112


>gi|91775577|ref|YP_545333.1| ribonucleotide-diphosphate reductase subunit beta [Methylobacillus
           flagellatus KT]
 gi|91709564|gb|ABE49492.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Methylobacillus flagellatus KT]
          Length = 377

 Score = 37.7 bits (86), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 3/107 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   ++   GL + E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSQDRIDYQ---GLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKAN 160
             ++   AF E +HS ++ +II ++  D   +F+      +I A+A+
Sbjct: 106 ETWVETWAFSETIHSRSYTHIIRNIVSDPALIFDDIVRNENIVARAS 152


>gi|326479075|gb|EGE03085.1| pentatricopeptide repeat protein [Trichophyton equinum CBS 127.97]
          Length = 729

 Score = 37.7 bits (86), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 60/134 (44%), Gaps = 32/134 (23%)

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLL---- 118
           DDL   ++K+  T++ +L+    LG    +E   +  +V      LSNP+ R+ L+    
Sbjct: 173 DDLTYHRAKHANTEESKLLFGLYLGVLGKAEGTTSLKVV------LSNPQ-REVLVPSRP 225

Query: 119 -RQAFEEAVHSHTFQYIITSLGLD---EGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
            +QA  + + ++   ++++ L  +   + ELF  YR +P                 SP  
Sbjct: 226 CKQAGNDDLDANGVSHLVSLLSQEDCSDQELFAAYRRIP-----------------SPGV 268

Query: 175 HYWNKRRRSRILTR 188
            Y + R R ++L R
Sbjct: 269 SYLSSRTRGKLLHR 282


>gi|326469852|gb|EGD93861.1| hypothetical protein TESG_01392 [Trichophyton tonsurans CBS 112818]
          Length = 729

 Score = 37.7 bits (86), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 60/134 (44%), Gaps = 32/134 (23%)

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLL---- 118
           DDL   ++K+  T++ +L+    LG    +E   +  +V      LSNP+ R+ L+    
Sbjct: 173 DDLTYHRAKHANTEESKLLFGLYLGVLGKAEGTTSLKVV------LSNPQ-REVLVPSRP 225

Query: 119 -RQAFEEAVHSHTFQYIITSLGLD---EGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
            +QA  + + ++   ++++ L  +   + ELF  YR +P                 SP  
Sbjct: 226 CKQAGNDDLDANGVSHLVSLLSQEDCSDQELFAAYRRIP-----------------SPGV 268

Query: 175 HYWNKRRRSRILTR 188
            Y + R R ++L R
Sbjct: 269 SYLSSRTRGKLLHR 282


>gi|288904913|ref|YP_003430135.1| ribonucleoside-diphosphate reductase (minor subunit) [Streptococcus
           gallolyticus UCN34]
 gi|306830970|ref|ZP_07464132.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
 gi|288731639|emb|CBI13196.1| ribonucleoside-diphosphate reductase (minor subunit) [Streptococcus
           gallolyticus UCN34]
 gi|304426993|gb|EFM30103.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
          Length = 320

 Score = 37.4 bits (85), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L+ +E+ ++ +  G     +++ + + V
Sbjct: 22  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSAEEKDLVGKVFGGLTLLDTMQSESGV 75

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            AI   +  P     L    F E+VH+ ++  I ++L
Sbjct: 76  EAIRADVRTPHEEAVLNNIQFMESVHAKSYSSIFSTL 112


>gi|306833073|ref|ZP_07466204.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           bovis ATCC 700338]
 gi|304424782|gb|EFM27917.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           bovis ATCC 700338]
          Length = 320

 Score = 37.4 bits (85), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L+ +E+ ++ +  G     +++ + + V
Sbjct: 22  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSAEEKDLVGKVFGGLTLLDTMQSESGV 75

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            AI   +  P     L    F E+VH+ ++  I ++L
Sbjct: 76  EAIRADVRTPHEEAVLNNIQFMESVHAKSYSSIFSTL 112


>gi|169631086|ref|YP_001704735.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           abscessus ATCC 19977]
 gi|238055304|sp|B1MHK0|RIR2H_MYCA9 RecName: Full=R2-like ligand binding oxidase; AltName:
           Full=Ribonucleotide reductase R2 subunit homolog;
           AltName: Full=Ribonucleotide reductase small subunit
           homolog
 gi|169243053|emb|CAM64081.1| Ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
           abscessus]
          Length = 313

 Score = 37.4 bits (85), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 16/125 (12%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
           +PLK       +       W P  +    D A W+S   LT+ ER    R    F + E 
Sbjct: 19  MPLKL------FAGGNAKFWDPAGIDFSRDRADWES---LTERERDYATRLCAQFIAGEE 69

Query: 95  LVANNI--VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE---GELFNM- 148
            V  +I   ++  R         YL + AFEEA H+  F+  + ++G+ E   G L ++ 
Sbjct: 70  SVTQDIQPFMSAMRAEGRLGDEMYLTQFAFEEAKHTQVFRLWLDAVGVSEDLHGYLDDLP 129

Query: 149 -YREV 152
            YRE+
Sbjct: 130 AYREI 134


>gi|55821276|ref|YP_139718.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           thermophilus LMG 18311]
 gi|55823189|ref|YP_141630.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           thermophilus CNRZ1066]
 gi|116628014|ref|YP_820633.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           thermophilus LMD-9]
 gi|55737261|gb|AAV60903.1| ribonucleotide diphosphate reductase beta subunit [Streptococcus
           thermophilus LMG 18311]
 gi|55739174|gb|AAV62815.1| ribonucleotide diphosphate reductase beta subunit [Streptococcus
           thermophilus CNRZ1066]
 gi|116101291|gb|ABJ66437.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Streptococcus thermophilus LMD-9]
 gi|312278606|gb|ADQ63263.1| Ribonucleoside-diphosphate reductase class Ib beta subunit
           [Streptococcus thermophilus ND03]
          Length = 320

 Score = 37.4 bits (85), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L+ +E+ ++ +  G     +++ +   V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSAEEKDLVGKVFGGLTLLDTMQSQTGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            AI   +  P     L    F E+VH+ ++  I ++L
Sbjct: 75  EAIRADVRTPHEEAVLNNIQFMESVHAKSYSSIFSTL 111


>gi|223043034|ref|ZP_03613082.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           capitis SK14]
 gi|314933044|ref|ZP_07840410.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           caprae C87]
 gi|222443888|gb|EEE49985.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           capitis SK14]
 gi|313654363|gb|EFS18119.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           caprae C87]
          Length = 322

 Score = 37.4 bits (85), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 3/85 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W+ TE  +  D+A WK+   LTD E+   K+ L      ++  A++ +  I  H ++   
Sbjct: 25  WVETEFKVSKDIASWKT---LTDSEKETFKKALAGLTGLDTHQADDGMPLIMLHTTDLRK 81

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSL 138
           +      A  E +H+ ++ +I T+L
Sbjct: 82  KAVYSFMAMMEQIHAKSYSHIFTTL 106


>gi|325977861|ref|YP_004287577.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
 gi|325177789|emb|CBZ47833.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 320

 Score = 37.4 bits (85), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L+ +E+ ++ +  G     +++ + + V
Sbjct: 22  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSAEEKDLVGKVFGGLTLLDTMQSESGV 75

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            AI   +  P     L    F E+VH+ ++  I ++L
Sbjct: 76  EAIRADVRTPHEEAVLNNIQFMESVHAKSYSSIFSTL 112


>gi|304398198|ref|ZP_07380072.1| ribonucleotide reductase [Pantoea sp. aB]
 gi|304354064|gb|EFM18437.1| ribonucleotide reductase [Pantoea sp. aB]
          Length = 376

 Score = 37.4 bits (85), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 4/126 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +++   L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSRDRIDYQA---LPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
             ++   AF E +HS ++ +II ++  D   +F+       I A+A    +Y   L   +
Sbjct: 106 ETWIETWAFSETIHSRSYTHIIRNIVNDPAVVFDDIVTNEQILARAQDISRYYDDLIEMT 165

Query: 174 FHYWNK 179
            +YW++
Sbjct: 166 -NYWHQ 170


>gi|229172092|ref|ZP_04299657.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           MM3]
 gi|228611435|gb|EEK68692.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           MM3]
          Length = 193

 Score = 37.4 bits (85), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 50/121 (41%), Gaps = 5/121 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W   E+ +  D   W     L+ +E++  KR LG     ++      +  +  HL N + 
Sbjct: 26  WTEEEIAVSSDKNTWAQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLVLVHLENLQA 82

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSS 171
           +  L      E VH+ ++ +I T+L  +E   ++F      P +  KA     Y + L  
Sbjct: 83  KSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFEWVDNHPLLEKKAGIVTSYYRRLLK 142

Query: 172 P 172
           P
Sbjct: 143 P 143


>gi|325963521|ref|YP_004241427.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323469608|gb|ADX73293.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Arthrobacter phenanthrenivorans Sphe3]
          Length = 324

 Score = 37.4 bits (85), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 28/120 (23%), Positives = 51/120 (42%), Gaps = 5/120 (4%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
            NN W+P +VP+ +D+  W   N LT  E+ +  R        +++      +++     
Sbjct: 32  VNNFWLPEKVPLSNDVQSW---NTLTPAEQQLTMRVFTGLTLLDTIQGTVGAVSLIPDAL 88

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQ 167
            P         AF E+VH+ ++  I ++L   +   E F    E  ++  KA   + Y Q
Sbjct: 89  TPHEEAVYTNIAFMESVHAKSYSSIFSTLASTKEIDEAFRWSTENENLQKKAQIVMDYYQ 148


>gi|300718018|ref|YP_003742821.1| Ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia
           billingiae Eb661]
 gi|299063854|emb|CAX60974.1| Ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia
           billingiae Eb661]
          Length = 319

 Score = 37.4 bits (85), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 5/90 (5%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNI-VLAIYRHL 108
            +N W+P +VP+ +D+  W S N   D+++L I+   G   +    + N +   A+    
Sbjct: 27  TSNFWLPEKVPLSNDIPAWNSLNA--DEQQLTIRVFTGL--TLLDTIQNTVGAPALMADA 82

Query: 109 SNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
             P     +   +F EAVH+ ++  I ++L
Sbjct: 83  VTPHEEAVMSNVSFMEAVHARSYSSIFSTL 112


>gi|254471227|ref|ZP_05084629.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudovibrio
           sp. JE062]
 gi|211959373|gb|EEA94571.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudovibrio
           sp. JE062]
          Length = 325

 Score = 37.4 bits (85), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 10/145 (6%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
            +N W+P +VP+ +D+  W S   LT +E+ +  R        +++       A+     
Sbjct: 32  TSNFWLPEKVPLSNDVQSWAS---LTPEEQQLTIRVFTGLTLLDTIQNTVGAPALMADAV 88

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANWALQYTQ 167
            P     L   AF EAVH+ ++  + ++L    +  + F    E   + AK+   L+   
Sbjct: 89  TPHEEAVLTNIAFMEAVHARSYSSVFSTLCRTAEVDDAFRWSEENEFLQAKSRLILEEYN 148

Query: 168 TLSSPSFHYWNKRRRSRILTRSLRF 192
             SSP      K++ + +   S  F
Sbjct: 149 ATSSPL-----KKKIASVFLESFLF 168


>gi|170726650|ref|YP_001760676.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           woodyi ATCC 51908]
 gi|169811997|gb|ACA86581.1| Ribonucleoside-diphosphate reductase [Shewanella woodyi ATCC 51908]
          Length = 376

 Score = 37.4 bits (85), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 20/176 (11%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSA-CNNHWMPTEVPM 61
           N+  L P+  G+  VNV       AR DV      KY   +EK +    +  W P EV +
Sbjct: 11  NDARLEPMFLGQS-VNV-------ARYDVQ-----KYE-VFEKLIEKQLSFFWRPEEVDV 56

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D   + +   L D E+ +   NL +    +S+   +  +A    +S PE   ++   +
Sbjct: 57  SKDKIDYAA---LPDHEKHIFISNLKYQTLLDSIQGRSPNVAFLPLVSLPELETWIETWS 113

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLS--SPSFH 175
           F E +HS ++ +II ++  D   +F+   E   I  +A+   +Y  TL   + +FH
Sbjct: 114 FSETIHSRSYTHIIRNIVNDPSIVFDDIVENEEILKRASDIAEYYDTLIKLTQAFH 169


>gi|300717619|ref|YP_003742422.1| Ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           billingiae Eb661]
 gi|299063455|emb|CAX60575.1| Ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           billingiae Eb661]
          Length = 376

 Score = 37.4 bits (85), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 47/94 (50%), Gaps = 3/94 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   ++   GL D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSRDRIDYQ---GLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFN 147
             ++   AF E +HS ++ +II ++  D   +F+
Sbjct: 106 ETWIETWAFSETIHSRSYTHIIRNIVNDPAIVFD 139


>gi|94499220|ref|ZP_01305758.1| ribonucleotide-diphosphate reductase beta subunit [Oceanobacter sp.
           RED65]
 gi|94428852|gb|EAT13824.1| ribonucleotide-diphosphate reductase beta subunit [Oceanobacter sp.
           RED65]
          Length = 376

 Score = 37.4 bits (85), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 3/125 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D    K    L + E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDLSTDR---KDFAALPEHEKHIFLSNLKYQTLLDSIQGRSPNVALLPIVSLPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
             ++   +F E +HS ++ +II ++  D  ++F+       IT +A    +Y   L    
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNVISDPSKVFDDIVSNEYITKRAESVTKYYDDLIEGV 165

Query: 174 FHYWN 178
            +Y N
Sbjct: 166 TYYQN 170


>gi|322372696|ref|ZP_08047232.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           sp. C150]
 gi|321277738|gb|EFX54807.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           sp. C150]
          Length = 319

 Score = 37.4 bits (85), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L+ +E+ ++ +  G     +++ +   V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSAEEKDLVGKVFGGLTLLDTMQSQTGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            AI   +  P     L    F E+VH+ ++  I ++L
Sbjct: 75  EAIRADVRTPHEEAVLNNIQFMESVHAKSYSSIFSTL 111


>gi|308187586|ref|YP_003931717.1| ribonucleoside-diphosphate reductase 1 beta chain [Pantoea vagans
           C9-1]
 gi|308058096|gb|ADO10268.1| ribonucleoside-diphosphate reductase 1 beta chain [Pantoea vagans
           C9-1]
          Length = 376

 Score = 37.4 bits (85), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 4/126 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +++   L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSRDRIDYQA---LPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
             ++   AF E +HS ++ +II ++  D   +F+       I A+A    +Y   L   +
Sbjct: 106 ETWIETWAFSETIHSRSYTHIIRNIVNDPAVVFDDIVTNEQILARAQDISRYYDDLIEMT 165

Query: 174 FHYWNK 179
            +YW++
Sbjct: 166 -NYWHQ 170


>gi|228476905|ref|ZP_04061550.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           salivarius SK126]
 gi|228251479|gb|EEK10624.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           salivarius SK126]
          Length = 319

 Score = 37.4 bits (85), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L+ +E+ ++ +  G     +++ +   V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSAEEKDLVGKVFGGLTLLDTMQSQTGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            AI   +  P     L    F E+VH+ ++  I ++L
Sbjct: 75  EAIRADVRTPHEEAVLNNIQFMESVHAKSYSSIFSTL 111


>gi|268591162|ref|ZP_06125383.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rettgeri DSM 1131]
 gi|291313388|gb|EFE53841.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rettgeri DSM 1131]
          Length = 378

 Score = 37.4 bits (85), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 3/106 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   N L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 51  WRPEEVDVSRDRIDY---NALPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPEL 107

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKA 159
             ++   AF E +HS ++ +II ++  D   +F+   E   I  +A
Sbjct: 108 ETWVETWAFSETIHSRSYTHIIRNIVNDPAIIFDDIVENEEILKRA 153


>gi|229160405|ref|ZP_04288403.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           R309803]
 gi|228623129|gb|EEK79957.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           R309803]
          Length = 322

 Score = 37.4 bits (85), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 5/121 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W   E+ +  D   W     L+ +E++  KR LG     ++      +  +  HL N + 
Sbjct: 26  WTEEEIAVSSDKNTWAQ---LSKEEQVAYKRVLGGLTLLDTKQGGEGMPLVLVHLENLQA 82

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSS 171
           +  L      E VH+ ++ +I T+L  +E   ++F    + P +  KA     Y + L  
Sbjct: 83  KSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFEWVDKHPLLEKKAGIVTSYYRRLLK 142

Query: 172 P 172
           P
Sbjct: 143 P 143


>gi|293556439|ref|ZP_06675017.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1039]
 gi|291601403|gb|EFF31677.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1039]
          Length = 316

 Score = 37.4 bits (85), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 62/121 (51%), Gaps = 8/121 (6%)

Query: 41  WAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNI 100
           + W+K   A    W+ T VP+ +DL  WK+   L+D E+ ++K+ +G  A  ++L +   
Sbjct: 18  YVWDK---ATAQFWLDTRVPVSNDLLDWKN---LSDVEKKVVKKAVGGLALLDTLQSEEG 71

Query: 101 VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYREVPSITAK 158
           + A+ ++    + +  L    F E++H+ T+  I+ SL    D  E+++     P +  K
Sbjct: 72  LYALKKNARTQKEKAVLSDFTFMESIHAKTYGTILISLNTFKDIEEIYDWMNNDPKMQFK 131

Query: 159 A 159
           A
Sbjct: 132 A 132


>gi|242372965|ref|ZP_04818539.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           epidermidis M23864:W1]
 gi|242349291|gb|EES40892.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           epidermidis M23864:W1]
          Length = 322

 Score = 37.4 bits (85), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 3/85 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W+ TE  +  D+A WK+   L+D ER   K+ L      ++  A++ +  I  H ++   
Sbjct: 25  WVETEFKVSKDIASWKT---LSDSERETFKKALAGLTGLDTHQADDGMPLIMLHTTDLRK 81

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSL 138
           +      A  E +H+ ++ +I T+L
Sbjct: 82  KAVYSFMAMMEQIHAKSYSHIFTTL 106


>gi|146318863|ref|YP_001198575.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           suis 05ZYH33]
 gi|146321071|ref|YP_001200782.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           suis 98HAH33]
 gi|223932819|ref|ZP_03624816.1| Ribonucleoside-diphosphate reductase [Streptococcus suis 89/1591]
 gi|253751944|ref|YP_003025085.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus suis SC84]
 gi|253753767|ref|YP_003026908.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus suis
           P1/7]
 gi|253755355|ref|YP_003028495.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus suis
           BM407]
 gi|330833008|ref|YP_004401833.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           suis ST3]
 gi|145689669|gb|ABP90175.1| Ribonucleotide reductase, beta subunit [Streptococcus suis 05ZYH33]
 gi|145691877|gb|ABP92382.1| Ribonucleotide reductase, beta subunit [Streptococcus suis 98HAH33]
 gi|223898528|gb|EEF64892.1| Ribonucleoside-diphosphate reductase [Streptococcus suis 89/1591]
 gi|251816233|emb|CAZ51860.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus suis SC84]
 gi|251817819|emb|CAZ55572.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus suis BM407]
 gi|251820013|emb|CAR46187.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus suis P1/7]
 gi|292558520|gb|ADE31521.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           suis GZ1]
 gi|319758306|gb|ADV70248.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           suis JS14]
 gi|329307231|gb|AEB81647.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           suis ST3]
          Length = 319

 Score = 37.4 bits (85), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    LT +E+ ++ +  G     ++L +   V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LTAEEKDLVGKVFGGLTLLDTLQSETGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            A+   +  P          F E+VH+ ++  I ++L
Sbjct: 75  QALRNDIRTPHEEAVYNNIQFMESVHAKSYSSIFSTL 111


>gi|302023955|ref|ZP_07249166.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           suis 05HAS68]
          Length = 320

 Score = 37.4 bits (85), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    LT +E+ ++ +  G     ++L +   V
Sbjct: 22  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LTAEEKDLVGKVFGGLTLLDTLQSETGV 75

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            A+   +  P          F E+VH+ ++  I ++L
Sbjct: 76  QALRNDIRTPHEEAVYNNIQFMESVHAKSYSSIFSTL 112


>gi|15842613|ref|NP_337650.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis CDC1551]
 gi|31794226|ref|NP_856719.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           bovis AF2122/97]
 gi|57117051|ref|YP_177921.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis H37Rv]
 gi|121638932|ref|YP_979156.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           bovis BCG str. Pasteur 1173P2]
 gi|148662901|ref|YP_001284424.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis H37Ra]
 gi|148824239|ref|YP_001288993.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis F11]
 gi|167969649|ref|ZP_02551926.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis H37Ra]
 gi|215405040|ref|ZP_03417221.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 02_1987]
 gi|215412903|ref|ZP_03421607.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 94_M4241A]
 gi|215428496|ref|ZP_03426415.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T92]
 gi|215432000|ref|ZP_03429919.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis EAS054]
 gi|215447324|ref|ZP_03434076.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T85]
 gi|218754813|ref|ZP_03533609.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis GM 1503]
 gi|219559083|ref|ZP_03538159.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T17]
 gi|224991424|ref|YP_002646113.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium
           bovis BCG str. Tokyo 172]
 gi|253797854|ref|YP_003030855.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis KZN 1435]
 gi|254233678|ref|ZP_04927003.1| ribonucleoside-diphosphate reductase (beta chain) nrdF2
           [Mycobacterium tuberculosis C]
 gi|254365678|ref|ZP_04981723.1| ribonucleoside-diphosphate reductase (beta chain) nrdF2
           [Mycobacterium tuberculosis str. Haarlem]
 gi|254552123|ref|ZP_05142570.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|260188080|ref|ZP_05765554.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis CPHL_A]
 gi|260202186|ref|ZP_05769677.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis T46]
 gi|260206381|ref|ZP_05773872.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis K85]
 gi|289444611|ref|ZP_06434355.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
           tuberculosis T46]
 gi|289448726|ref|ZP_06438470.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis CPHL_A]
 gi|289553161|ref|ZP_06442371.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis KZN 605]
 gi|289571250|ref|ZP_06451477.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis T17]
 gi|289575758|ref|ZP_06455985.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis K85]
 gi|289746856|ref|ZP_06506234.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 02_1987]
 gi|289751720|ref|ZP_06511098.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis T92]
 gi|289755164|ref|ZP_06514542.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis EAS054]
 gi|289759173|ref|ZP_06518551.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T85]
 gi|289763226|ref|ZP_06522604.1| ribonucleoside-diphosphate reductase (beta chain) nrdF2
           [Mycobacterium tuberculosis GM 1503]
 gi|294993448|ref|ZP_06799139.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 210]
 gi|297635679|ref|ZP_06953459.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis KZN 4207]
 gi|297732677|ref|ZP_06961795.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis KZN R506]
 gi|298526518|ref|ZP_07013927.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 94_M4241A]
 gi|306777354|ref|ZP_07415691.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu001]
 gi|306781258|ref|ZP_07419595.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu002]
 gi|306785899|ref|ZP_07424221.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu003]
 gi|306790253|ref|ZP_07428575.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu004]
 gi|306794748|ref|ZP_07433050.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu005]
 gi|306798990|ref|ZP_07437292.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu006]
 gi|306804833|ref|ZP_07441501.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu008]
 gi|306809026|ref|ZP_07445694.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu007]
 gi|306969126|ref|ZP_07481787.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu009]
 gi|306973470|ref|ZP_07486131.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu010]
 gi|307081181|ref|ZP_07490351.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu011]
 gi|307085780|ref|ZP_07494893.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu012]
 gi|313660009|ref|ZP_07816889.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis KZN V2475]
 gi|81671996|sp|Q50549|RIR2B_MYCTU RecName: Full=Ribonucleoside-diphosphate reductase subunit beta
           nrdF2; AltName: Full=Ribonucleoside-diphosphate
           reductase nrdF2; AltName: Full=Ribonucleotide reductase
           R2-2 small subunit
 gi|1395209|gb|AAB81406.1| ribonucleotide reductase R2-2 small subunit [Mycobacterium
           tuberculosis]
 gi|13882928|gb|AAK47464.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
           [Mycobacterium tuberculosis CDC1551]
 gi|31619821|emb|CAD96761.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF2
           (RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT) (R2F PROTEIN)
           [Mycobacterium bovis AF2122/97]
 gi|41352780|emb|CAE55544.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF2
           (RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT) (R2F PROTEIN)
           [Mycobacterium tuberculosis H37Rv]
 gi|121494580|emb|CAL73061.1| Ribonucleoside-diphosphate reductase (beta chain) nrdF2
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|124599207|gb|EAY58311.1| ribonucleoside-diphosphate reductase (beta chain) nrdF2
           [Mycobacterium tuberculosis C]
 gi|134151191|gb|EBA43236.1| ribonucleoside-diphosphate reductase (beta chain) nrdF2
           [Mycobacterium tuberculosis str. Haarlem]
 gi|148507053|gb|ABQ74862.1| ribonucleoside-diphosphate reductase subunit beta NrdF2
           [Mycobacterium tuberculosis H37Ra]
 gi|148722766|gb|ABR07391.1| ribonucleoside-diphosphate reductase beta subunit nrdF2
           [Mycobacterium tuberculosis F11]
 gi|224774539|dbj|BAH27345.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium
           bovis BCG str. Tokyo 172]
 gi|253319357|gb|ACT23960.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis KZN 1435]
 gi|289417530|gb|EFD14770.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
           tuberculosis T46]
 gi|289421684|gb|EFD18885.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis CPHL_A]
 gi|289437793|gb|EFD20286.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis KZN 605]
 gi|289540189|gb|EFD44767.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis K85]
 gi|289545004|gb|EFD48652.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis T17]
 gi|289687384|gb|EFD54872.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 02_1987]
 gi|289692307|gb|EFD59736.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis T92]
 gi|289695751|gb|EFD63180.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis EAS054]
 gi|289710732|gb|EFD74748.1| ribonucleoside-diphosphate reductase (beta chain) nrdF2
           [Mycobacterium tuberculosis GM 1503]
 gi|289714737|gb|EFD78749.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T85]
 gi|298496312|gb|EFI31606.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 94_M4241A]
 gi|308214246|gb|EFO73645.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu001]
 gi|308325901|gb|EFP14752.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu002]
 gi|308329423|gb|EFP18274.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu003]
 gi|308333268|gb|EFP22119.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu004]
 gi|308336923|gb|EFP25774.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu005]
 gi|308340739|gb|EFP29590.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu006]
 gi|308344606|gb|EFP33457.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu007]
 gi|308348554|gb|EFP37405.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu008]
 gi|308353280|gb|EFP42131.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu009]
 gi|308357113|gb|EFP45964.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu010]
 gi|308361065|gb|EFP49916.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu011]
 gi|308364701|gb|EFP53552.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu012]
 gi|323718280|gb|EGB27458.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis CDC1551A]
 gi|326902729|gb|EGE49662.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis W-148]
 gi|328457631|gb|AEB03054.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis KZN 4207]
          Length = 324

 Score = 37.4 bits (85), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 60/137 (43%), Gaps = 10/137 (7%)

Query: 32  NQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFAS 91
           N+L   K    W++      N W+P +VP+ +D+  W +   LT  E+ +  R       
Sbjct: 17  NRLQDEKDAEVWDRL---TGNFWLPEKVPVSNDIPSWGT---LTAGEKQLTMRVFTGLTM 70

Query: 92  SESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR- 150
            +++      +++      P     L   AF E+VH+ ++  I ++L     E+ + +R 
Sbjct: 71  LDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTL-CSTAEIDDAFRW 129

Query: 151 --EVPSITAKANWALQY 165
             E  ++  KA   LQY
Sbjct: 130 SEENRNLQRKAEIVLQY 146


>gi|206968243|ref|ZP_03229199.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           AH1134]
 gi|228951833|ref|ZP_04113931.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
 gi|228957726|ref|ZP_04119470.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|229069003|ref|ZP_04202296.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           F65185]
 gi|206737163|gb|EDZ54310.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           AH1134]
 gi|228714115|gb|EEL65997.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           F65185]
 gi|228801969|gb|EEM48842.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|228807756|gb|EEM54277.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
          Length = 193

 Score = 37.4 bits (85), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 5/121 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W   E+ +  D   W     L+ +E++  KR LG     ++      +  +  HL N + 
Sbjct: 26  WTEEEIAVSSDKNTWVQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLVLVHLENLQA 82

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSS 171
           +  L      E VH+ ++ +I T+L  +E   ++F+     P +  KA     Y + L  
Sbjct: 83  KSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFDWVDNHPLLEKKAGIITSYYRRLLK 142

Query: 172 P 172
           P
Sbjct: 143 P 143


>gi|156564205|ref|YP_001429715.1| nrd beta subunit [Bacillus phage 0305phi8-36]
 gi|154622902|gb|ABS83782.1| nrd beta subunit [Bacillus phage 0305phi8-36]
          Length = 352

 Score = 37.4 bits (85), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 4/87 (4%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           N W P E+ M++D  +W S   +  D  L +   L    S    +    +L + R  +N 
Sbjct: 57  NFWRPVEIKMKEDEKMWDSLTPIEQDTFLRVGTALACLDS----LQVKAILEVIRFTTNS 112

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSL 138
                    A +EA H+ ++ YI +SL
Sbjct: 113 ALANISAFIAQQEATHTTSYSYITSSL 139


>gi|326782458|ref|YP_004322858.1| ribonucleotide reductase A subunit [Synechococcus phage S-ShM2]
 gi|310003406|gb|ADO97803.1| ribonucleotide reductase A subunit [Synechococcus phage S-ShM2]
          Length = 386

 Score = 37.4 bits (85), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 3/94 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +Q D A +     LT ++R +   NL +    +S+      +A   + S PE 
Sbjct: 57  WRPEEVSLQKDRADYAQ---LTPEQRHIFTSNLKYQIMLDSVQGRGPGMAFIPYCSLPEL 113

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFN 147
              +    F E +HS ++ YII ++  +  ++F+
Sbjct: 114 EACMNVWEFMEMIHSRSYTYIIKNVYSNPEDVFD 147


>gi|254819781|ref|ZP_05224782.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           intracellulare ATCC 13950]
          Length = 322

 Score = 37.4 bits (85), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 23/107 (21%), Positives = 47/107 (43%), Gaps = 6/107 (5%)

Query: 32  NQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFAS 91
           N+L   K    W++      N W+P +VP+ +D A W++         + +   L    +
Sbjct: 15  NRLPDPKDAQVWDRL---TGNFWLPEKVPLSNDSASWQTLTAQEQQTTVRVFTGLTLLDT 71

Query: 92  SESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           +++ V     +++      P     L   AF E+VH+ ++  I ++L
Sbjct: 72  TQATVG---AVSMIADAVTPHEEAVLTNIAFMESVHAKSYSSIFSTL 115


>gi|195977892|ref|YP_002123136.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           equi subsp. zooepidemicus MGCS10565]
 gi|195974597|gb|ACG62123.1| ribonucleotide reductase of class Ib (aerobic) beta subunit NrdF
           [Streptococcus equi subsp. zooepidemicus MGCS10565]
          Length = 319

 Score = 37.4 bits (85), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L+  E+ ++ +  G     +++ + + V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSAVEKDLVGKVFGGLTLLDTMQSESGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            AI + +  P     L    F E+VH+ ++  I ++L
Sbjct: 75  EAIRKDVRTPHEEAVLNNIQFMESVHAKSYSSIFSTL 111


>gi|47566242|ref|ZP_00237270.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           G9241]
 gi|47556795|gb|EAL15126.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           G9241]
          Length = 322

 Score = 37.4 bits (85), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 5/121 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W   E+ +  D   W     L+  E++  KR LG     ++      +  +  HL N + 
Sbjct: 26  WTEEEIAVSSDKNTWAQ---LSKQEQVAYKRVLGGLTLLDTKQGGEGMPLVLVHLENLQA 82

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSS 171
           +  L      E VH+ ++ +I T+L  +E   E+F+     P +  KA     Y + L  
Sbjct: 83  KSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDEIFDWVDTHPLLEKKAGIITSYYRRLLK 142

Query: 172 P 172
           P
Sbjct: 143 P 143


>gi|156743708|ref|YP_001433837.1| ribonucleotide-diphosphate reductase subunit beta [Roseiflexus
           castenholzii DSM 13941]
 gi|156235036|gb|ABU59819.1| ribonucleotide reductase [Roseiflexus castenholzii DSM 13941]
          Length = 295

 Score = 37.0 bits (84), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 5/94 (5%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P+++    D+  W++   LTDDER ++ R    F + E  V  +++  +    +    
Sbjct: 33  WNPSDIDFSQDMRDWQT---LTDDERDLVLRLTSLFQAGEEAVTLDLLPLVATIAAEGRI 89

Query: 114 RQYLLRQAF--EEAVHSHTFQYIITSLGLDEGEL 145
            + L   +F  EEA H+  F   +T +    G+L
Sbjct: 90  EEELFLTSFLWEEAKHTDFFNRFLTEVAGVTGDL 123


>gi|315644971|ref|ZP_07898099.1| Ribonucleoside-diphosphate reductase [Paenibacillus vortex V453]
 gi|315279682|gb|EFU42984.1| Ribonucleoside-diphosphate reductase [Paenibacillus vortex V453]
          Length = 343

 Score = 37.0 bits (84), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 24/104 (23%), Positives = 49/104 (47%), Gaps = 6/104 (5%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           NHW+  E+PM  D   + +   L  +E+   K N+   A  +S+     V  + R+ ++ 
Sbjct: 47  NHWIADEIPMSKDAQQFPT---LDSEEQRTFKINISLLAVLDSM-QTMFVSDVKRYFTDS 102

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSLGLD--EGELFNMYREVP 153
                      +E VH+ ++ Y+++S+  D  + E+F  ++  P
Sbjct: 103 SLEAISAIIGQQEVVHNQSYSYVLSSIVSDQEQKEIFEYWKHDP 146


>gi|123441277|ref|YP_001005264.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122088238|emb|CAL11027.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 323

 Score = 37.0 bits (84), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 5/116 (4%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           N W+P +VP+ +D+  W     LT DE+ +  R        +++       A+ +    P
Sbjct: 33  NFWLPEKVPLSNDIPSWAK---LTADEQQLTIRVFTGLTLLDTIQNTLGAPALIKDAITP 89

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYREVPSITAKANWALQY 165
                    +F EAVH+ ++  I ++L +  D  E +    E   +  KA+  LQ+
Sbjct: 90  HEEAVFSNISFMEAVHARSYSSIFSTLCMTSDVDEAYRWSEENGPLQKKADIILQH 145


>gi|116333244|ref|YP_794771.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           brevis ATCC 367]
 gi|116098591|gb|ABJ63740.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Lactobacillus brevis ATCC 367]
          Length = 331

 Score = 37.0 bits (84), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W++   L  D + ++    G     ++L + + +
Sbjct: 23  TWEK---LTEQFWLDTRIPVSNDLDDWRT---LDTDHQWVVGHVFGGLTLLDTLQSQDGM 76

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            A+ R +  P     L    F E+VH+ ++  I ++L
Sbjct: 77  AALRRDIRTPHETAVLNNIQFMESVHAKSYSTIFSTL 113


>gi|332162772|ref|YP_004299349.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|325667002|gb|ADZ43646.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
          Length = 323

 Score = 37.0 bits (84), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 5/116 (4%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           N W+P +VP+ +D+  W     LT DE+ +  R        +++       A+ +    P
Sbjct: 33  NFWLPEKVPLSNDIPSWAK---LTADEQQLTIRVFTGLTLLDTIQNTLGAPALIKDAITP 89

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYREVPSITAKANWALQY 165
                    +F EAVH+ ++  I ++L +  D  E +    E   +  KA+  LQ+
Sbjct: 90  HEEAVFSNISFMEAVHARSYSSIFSTLCMTSDVDEAYRWSEENGPLQKKADIILQH 145


>gi|27467432|ref|NP_764069.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           epidermidis ATCC 12228]
 gi|57866341|ref|YP_187991.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           epidermidis RP62A]
 gi|251810165|ref|ZP_04824638.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           epidermidis BCM-HMP0060]
 gi|282875687|ref|ZP_06284558.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           epidermidis SK135]
 gi|293368193|ref|ZP_06614822.1| ribonucleoside-diphosphate reductase subunit beta [Staphylococcus
           epidermidis M23864:W2(grey)]
 gi|27314975|gb|AAO04111.1|AE016745_210 ribonucleoside-diphosphate reductase minor subunit [Staphylococcus
           epidermidis ATCC 12228]
 gi|57636999|gb|AAW53787.1| ribonucleoside-diphosphate reductase 2, beta subunit
           [Staphylococcus epidermidis RP62A]
 gi|251806217|gb|EES58874.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           epidermidis BCM-HMP0060]
 gi|281295714|gb|EFA88237.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           epidermidis SK135]
 gi|291317616|gb|EFE58033.1| ribonucleoside-diphosphate reductase subunit beta [Staphylococcus
           epidermidis M23864:W2(grey)]
 gi|329723280|gb|EGG59810.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           epidermidis VCU144]
 gi|329736749|gb|EGG73014.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           epidermidis VCU028]
 gi|329737954|gb|EGG74178.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           epidermidis VCU045]
          Length = 322

 Score = 37.0 bits (84), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 3/85 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W+ TE  +  D+A WK+   LTD E+   K+ L      ++  A++ +  I  H ++   
Sbjct: 25  WVETEFKVSKDIASWKT---LTDSEKNTFKKALAGLTGLDTHQADDGMPLIMLHTTDLRK 81

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSL 138
           +      A  E +H+ ++ +I T+L
Sbjct: 82  KAVYSFMAMMEQIHAKSYSHIFTTL 106


>gi|242242101|ref|ZP_04796546.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           epidermidis W23144]
 gi|242234414|gb|EES36726.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           epidermidis W23144]
 gi|319401190|gb|EFV89405.1| ribonucleoside-diphosphate reductase subunit beta [Staphylococcus
           epidermidis FRI909]
          Length = 322

 Score = 37.0 bits (84), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 3/85 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W+ TE  +  D+A WK+   LTD E+   K+ L      ++  A++ +  I  H ++   
Sbjct: 25  WVETEFKVSKDIASWKT---LTDSEKNTFKKALAGLTGLDTHQADDGMPLIMLHTTDLRK 81

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSL 138
           +      A  E +H+ ++ +I T+L
Sbjct: 82  KAVYSFMAMMEQIHAKSYSHIFTTL 106


>gi|318606878|emb|CBY28376.1| ribonucleotide reductase of class Ib (aerobic),beta subunit
           [Yersinia enterocolitica subsp. palearctica Y11]
          Length = 323

 Score = 37.0 bits (84), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 5/116 (4%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           N W+P +VP+ +D+  W     LT DE+ +  R        +++       A+ +    P
Sbjct: 33  NFWLPEKVPLSNDIPSWAK---LTADEQQLTIRVFTGLTLLDTIQNTLGAPALIKDAITP 89

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYREVPSITAKANWALQY 165
                    +F EAVH+ ++  I ++L +  D  E +    E   +  KA+  LQ+
Sbjct: 90  HEEAVFSNISFMEAVHARSYSSIFSTLCMTSDVDEAYRWSEENGPLQKKADIILQH 145


>gi|121602770|ref|YP_988676.1| ribonucleotide-diphosphate reductase subunit beta [Bartonella
           bacilliformis KC583]
 gi|120614947|gb|ABM45548.1| ribonucleoside-diphosphate reductase, beta subunit [Bartonella
           bacilliformis KC583]
          Length = 324

 Score = 37.0 bits (84), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 5/118 (4%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           N W+P +VP+ +D+  W+S   LT++E+ +  R        +++      +++       
Sbjct: 34  NFWLPEKVPLSNDIPSWES---LTEEEKKLTIRVFTGLTLLDTVQNTVGAVSLMADAVTE 90

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYREVPSITAKANWALQYTQ 167
                L   AF EAVH+ ++  I ++L L  D  + F    E   +  KA   L++ +
Sbjct: 91  HEEAVLTNIAFMEAVHARSYSSIFSTLCLTVDVDDAFRWSEENVYLQKKAKLVLEHYE 148


>gi|227514022|ref|ZP_03944071.1| ribonucleoside-diphosphate reductase [Lactobacillus fermentum ATCC
           14931]
 gi|227087608|gb|EEI22920.1| ribonucleoside-diphosphate reductase [Lactobacillus fermentum ATCC
           14931]
          Length = 333

 Score = 37.0 bits (84), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 6/107 (5%)

Query: 32  NQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFAS 91
           NQ+  +     WEK        W+ T +P+ +DL  W+    L DD +  +    G    
Sbjct: 12  NQVSDMIDKATWEK---LTEQFWLDTRIPVSNDLDDWRE---LDDDHKWTVGHVFGGLTL 65

Query: 92  SESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            ++L +   + A+ + +  P     L    F E+VH+ ++  I ++L
Sbjct: 66  LDTLQSEAGLTALKQDVKTPHETAVLNNIQFMESVHAKSYSTIFSTL 112


>gi|126437012|ref|YP_001072703.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           sp. JLS]
 gi|238055308|sp|A3Q4Y5|RIR2H_MYCSJ RecName: Full=R2-like ligand binding oxidase; AltName:
           Full=Ribonucleotide reductase R2 subunit homolog;
           AltName: Full=Ribonucleotide reductase small subunit
           homolog
 gi|126236812|gb|ABO00213.1| putative ribonucleotide reductase small chain [Mycobacterium sp.
           JLS]
          Length = 312

 Score = 37.0 bits (84), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 5/89 (5%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNI--VLAIYRHLSNP 111
           W P ++    D A W+S + L   ER    R    F + E  V  +I   +A  R     
Sbjct: 32  WDPADIDFSKDRADWESLSNL---ERDWATRLCAQFIAGEEAVTQDIQPFMAAMRAEGRL 88

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
               YL + AFEEA H+  F+  + ++G+
Sbjct: 89  GDEMYLTQFAFEEAKHTQVFRMWLDAVGM 117


>gi|184154755|ref|YP_001843095.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           fermentum IFO 3956]
 gi|260663216|ref|ZP_05864108.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           fermentum 28-3-CHN]
 gi|183226099|dbj|BAG26615.1| ribonucleoside-diphosphate reductase beta subunit [Lactobacillus
           fermentum IFO 3956]
 gi|260552408|gb|EEX25459.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           fermentum 28-3-CHN]
 gi|299782855|gb|ADJ40853.1| Ribonucleoside-diphosphate reductase beta subunit [Lactobacillus
           fermentum CECT 5716]
          Length = 333

 Score = 37.0 bits (84), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 6/107 (5%)

Query: 32  NQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFAS 91
           NQ+  +     WEK        W+ T +P+ +DL  W+    L DD +  +    G    
Sbjct: 12  NQVSDMIDKATWEK---LTEQFWLDTRIPVSNDLDDWRE---LDDDHKWTVGHVFGGLTL 65

Query: 92  SESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            ++L +   + A+ + +  P     L    F E+VH+ ++  I ++L
Sbjct: 66  LDTLQSEAGLTALKQDVKTPHETAVLNNIQFMESVHAKSYSTIFSTL 112


>gi|221134587|ref|ZP_03560892.1| ribonucleotide-diphosphate reductase subunit beta [Glaciecola sp.
           HTCC2999]
          Length = 376

 Score = 37.0 bits (84), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 3/106 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   ++   GL+D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSKDRMDFQ---GLSDAEKHIFISNLKYQTLLDSVQGRSPNIALLPIVSLPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKA 159
             ++   +F E +HS ++ +I+ +L  D   +F    E   I  +A
Sbjct: 106 ETWIETWSFFETIHSRSYTHILRNLFTDPSNIFEDIVENEEIKRRA 151


>gi|225868773|ref|YP_002744721.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus equi
           subsp. zooepidemicus]
 gi|225702049|emb|CAW99658.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus equi subsp. zooepidemicus]
          Length = 319

 Score = 37.0 bits (84), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L+  E+ ++ +  G     +++ + + V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSAVEKDLVGKVFGGLTLLDTMQSESGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            AI + +  P     L    F E+VH+ ++  I ++L
Sbjct: 75  EAIRKDVRTPHEEAVLNNIQFMESVHAKSYSSIFSTL 111


>gi|228475302|ref|ZP_04060026.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           hominis SK119]
 gi|228270678|gb|EEK12092.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           hominis SK119]
          Length = 322

 Score = 37.0 bits (84), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 3/85 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W+ TE  +  D+A WK+   LT+DE+   KR L      ++  A++ +  I  H ++   
Sbjct: 25  WVETEFKVSKDIASWKT---LTEDEKNTFKRALAGLTGLDTHQADDGMPLIMLHTTDLRK 81

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSL 138
           +         E +H+ ++ +I T+L
Sbjct: 82  KAVYSFMQMMEQIHAKSYSHIFTTL 106


>gi|149190928|ref|ZP_01869191.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio shilonii
           AK1]
 gi|148835283|gb|EDL52257.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio shilonii
           AK1]
          Length = 377

 Score = 37.0 bits (84), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 3/123 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   N L + E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSSDRIDY---NKLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
             ++   +F E +HS ++ +II ++  D G +F+   E   I  +A     Y   L   +
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIVNDPGVVFDDIVENEHILKRAKDIAHYYDDLIQAT 165

Query: 174 FHY 176
             Y
Sbjct: 166 NDY 168


>gi|228907084|ref|ZP_04070948.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis IBL 200]
 gi|157955401|gb|ABW06095.1| NrdF [Bacillus thuringiensis serovar toumanoffi]
 gi|228852588|gb|EEM97378.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis IBL 200]
          Length = 322

 Score = 37.0 bits (84), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 5/122 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W   E+ +  D   W     L+ +E++  KR LG     ++      +  +  HL N + 
Sbjct: 26  WTEEEIAVSSDKNTWAQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLVLVHLENLQA 82

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSS 171
           +  L      E VH+ ++ +I T+L  +E   ++F+     P +  KA     Y + L  
Sbjct: 83  KSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFDWVDNHPLLEKKAGIITGYYRRLLK 142

Query: 172 PS 173
           P 
Sbjct: 143 PE 144


>gi|314936969|ref|ZP_07844316.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           hominis subsp. hominis C80]
 gi|313655588|gb|EFS19333.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           hominis subsp. hominis C80]
          Length = 322

 Score = 37.0 bits (84), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 3/85 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W+ TE  +  D+A WK+   LT+DE+   KR L      ++  A++ +  I  H ++   
Sbjct: 25  WVETEFKVSKDIASWKT---LTEDEKNTFKRALAGLTGLDTHQADDGMPLIMLHTTDLRK 81

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSL 138
           +         E +H+ ++ +I T+L
Sbjct: 82  KAVYSFMQMMEQIHAKSYSHIFTTL 106


>gi|116493227|ref|YP_804962.1| ribonucleotide-diphosphate reductase subunit beta [Pediococcus
           pentosaceus ATCC 25745]
 gi|116103377|gb|ABJ68520.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Pediococcus pentosaceus ATCC 25745]
          Length = 317

 Score = 37.0 bits (84), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL+ W+    L +D + ++    G     ++L + + +
Sbjct: 20  TWEK---LTEQFWLDTRIPISNDLSDWRE---LDEDHKWVVGHVFGGLTLLDTLQSQDGM 73

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            A+ + +  P     L    F E+VH+ ++  I  +L
Sbjct: 74  AALRKDIRTPHETAVLNNIQFMESVHAKSYSSIFETL 110


>gi|328543067|ref|YP_004303176.1| Ribonucleoside-diphosphate reductase, beta subunit [Polymorphum
           gilvum SL003B-26A1]
 gi|326412813|gb|ADZ69876.1| Ribonucleoside-diphosphate reductase, beta subunit [Polymorphum
           gilvum SL003B-26A1]
          Length = 325

 Score = 37.0 bits (84), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 28/143 (19%), Positives = 58/143 (40%), Gaps = 10/143 (6%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           N W+P +VP+ +D+  W +         + +   L    + ++++    ++A       P
Sbjct: 34  NFWLPEKVPLSNDIPSWATLTAAEQQLTIRVFTGLTLLDTIQNMIGAPALMA---DAITP 90

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANWALQYTQTL 169
                L   AF EAVH+ ++  + ++L    +  + F    E P + AK+   L      
Sbjct: 91  HEEAVLTNIAFMEAVHARSYSSVFSTLCRTAEVDDAFRWSAENPQLQAKSRLILNEYDAS 150

Query: 170 SSPSFHYWNKRRRSRILTRSLRF 192
            +P      K++ + +   S  F
Sbjct: 151 GTPL-----KKKIASVFLESFLF 168


>gi|229095937|ref|ZP_04226913.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-29]
 gi|229114891|ref|ZP_04244304.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock1-3]
 gi|228668583|gb|EEL24012.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock1-3]
 gi|228687447|gb|EEL41349.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-29]
          Length = 322

 Score = 37.0 bits (84), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 5/121 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W   E+ +  D   W     L+ +E++  KR LG     ++      +  +  HL N + 
Sbjct: 26  WTEEEIAVSSDKNTWAQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLVLVHLENLQA 82

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSS 171
           +  L      E VH+ ++ +I T+L  +E   ++F      P +  KA    +Y + L  
Sbjct: 83  KSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFEWVDNHPLLEKKAGIITRYYRRLLK 142

Query: 172 P 172
           P
Sbjct: 143 P 143


>gi|220912864|ref|YP_002488173.1| ribonucleotide-diphosphate reductase subunit beta [Arthrobacter
           chlorophenolicus A6]
 gi|219859742|gb|ACL40084.1| Ribonucleoside-diphosphate reductase [Arthrobacter chlorophenolicus
           A6]
          Length = 324

 Score = 37.0 bits (84), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 28/120 (23%), Positives = 51/120 (42%), Gaps = 5/120 (4%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
            NN W+P +VP+ +D+  W   N LT  E+ +  R        +++      +++     
Sbjct: 32  VNNFWLPEKVPLSNDVQSW---NTLTPVEQQLTMRVFTGLTLLDTIQGTVGAVSLIPDAL 88

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQ 167
            P         AF E+VH+ ++  I ++L   +   E F    E  ++  KA   + Y Q
Sbjct: 89  TPHEEAVYTNIAFMESVHAKSYSSIFSTLASTKEIDEAFRWSTENENLQKKAQIVMDYYQ 148


>gi|229057079|ref|ZP_04196471.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH603]
 gi|228720220|gb|EEL71799.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH603]
          Length = 322

 Score = 37.0 bits (84), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 50/121 (41%), Gaps = 5/121 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W   E+ +  D   W     L+ +E++  KR LG     ++      +  +  HL N + 
Sbjct: 26  WTEEEIAVSSDKNTWAQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLVLVHLENLQA 82

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSS 171
           +  L      E VH+ ++ +I T+L  +E   ++F      P +  KA     Y + L  
Sbjct: 83  KSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFEWVDNHPLLEKKAGIVTSYYRRLLK 142

Query: 172 P 172
           P
Sbjct: 143 P 143


>gi|73663294|ref|YP_302075.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           saprophyticus subsp. saprophyticus ATCC 15305]
 gi|72495809|dbj|BAE19130.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus
           saprophyticus subsp. saprophyticus ATCC 15305]
          Length = 322

 Score = 37.0 bits (84), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 3/85 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W+ TE  +  D+A WK+   LTD E+   K+ L      ++  A++ +  I  H ++   
Sbjct: 25  WVETEFKVSKDIASWKT---LTDPEKEAFKKALAGLTGLDTHQADDGMPLIMLHTTDLRK 81

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSL 138
           +      A  E +H+ ++ +I T+L
Sbjct: 82  KAVYSFMAMMEQIHAKSYSHIFTTL 106


>gi|54026269|ref|YP_120511.1| ribonucleotide-diphosphate reductase subunit beta [Nocardia
           farcinica IFM 10152]
 gi|54017777|dbj|BAD59147.1| putative ribonucleoside-diphosphate reductase beta subunit
           [Nocardia farcinica IFM 10152]
          Length = 320

 Score = 36.6 bits (83), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 9/122 (7%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  W   N LT  E+ +  R        +++      +++     
Sbjct: 28  TGNFWLPEKVPVSNDIPSW---NTLTPHEQQLTMRVFTGLTLLDTIQGTVGAVSLIPDAL 84

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL----GLDEGELFNMYREVPSITAKANWALQY 165
            P     L   AF E+VH+ ++  I ++L     +DE   F    E  ++  KA   L Y
Sbjct: 85  TPHEEAVLTNIAFMESVHAKSYSSIFSTLCSTKEIDEA--FRWSEENRNLQRKAEIVLDY 142

Query: 166 TQ 167
            Q
Sbjct: 143 YQ 144


>gi|238695114|ref|YP_002922308.1| aerobic NDP reductase small subunit [Enterobacteria phage JSE]
 gi|220029250|gb|ACL78185.1| aerobic NDP reductase small subunit [Enterobacteria phage JSE]
          Length = 388

 Score = 36.6 bits (83), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 30/149 (20%), Positives = 58/149 (38%), Gaps = 12/149 (8%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P E+ +  D   + +   + D E+     NL +    +S+       A    +S+P  
Sbjct: 49  WRPEEISLATDRIQYLN---MGDVEKRFFTENLKYQTLLDSIQGRAPSAAFGPIVSDPTL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL---- 169
             +L    F E +HS ++ +I+ +  +D    F+   + P+I  +A    +Y   +    
Sbjct: 106 DTWLQTWTFSETIHSRSYTHIMRNCFIDPASEFDQIIDNPAIMKRAESIGKYYDDVLYWI 165

Query: 170 -----SSPSFHYWNKRRRSRILTRSLRFL 193
                +     YW +R     L  + RF 
Sbjct: 166 RKYENAKEDLRYWEERDDQTALDDARRFF 194


>gi|172039808|ref|YP_001799522.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           urealyticum DSM 7109]
 gi|171851112|emb|CAQ04088.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           urealyticum DSM 7109]
          Length = 334

 Score = 36.6 bits (83), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 20/124 (16%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR---NLGFFASSESLVANNI 100
           E +L    N W+P +VP+ +DL  W   N L+D ER +  R    L    + ++ V    
Sbjct: 37  EVWLRLTANFWLPEKVPLSNDLPDW---NRLSDLERTLTMRVFTGLTLLDTMQATVGE-- 91

Query: 101 VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKAN 160
           +  I   L+  E   Y    AF +AVH+ ++  + ++L              P+I    +
Sbjct: 92  ISQIQDALTEHEEAVY-TNIAFMQAVHARSYSSVFSTLS-----------STPAINDAYD 139

Query: 161 WALQ 164
           WA++
Sbjct: 140 WAVK 143


>gi|49473850|ref|YP_031892.1| ribonucleotide-diphosphate reductase subunit beta [Bartonella
           quintana str. Toulouse]
 gi|49239353|emb|CAF25686.1| Ribonucleotide reductase beta-chain [Bartonella quintana str.
           Toulouse]
          Length = 324

 Score = 36.6 bits (83), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 3/88 (3%)

Query: 51  NNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSN 110
            N W+P +VP+ +D+  W S   LT++ER +  R        +++      +++      
Sbjct: 33  GNFWLPEKVPLSNDIPSWAS---LTEEERKLTVRVFTGLTLLDTIQNTVGAISLMADAIT 89

Query: 111 PECRQYLLRQAFEEAVHSHTFQYIITSL 138
                 L   AF EAVH+ ++  I ++L
Sbjct: 90  EHEEAVLTNIAFMEAVHARSYSSIFSTL 117


>gi|163867489|ref|YP_001608688.1| ribonucleotide-diphosphate reductase subunit beta [Bartonella
           tribocorum CIP 105476]
 gi|161017135|emb|CAK00693.1| ribonucleoside-diphosphate reductase beta chain [Bartonella
           tribocorum CIP 105476]
          Length = 324

 Score = 36.6 bits (83), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 3/89 (3%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  W S   LT++ER +  R        +++      +++     
Sbjct: 32  TGNFWLPEKVPLSNDIPSWSS---LTEEERKLTIRVFTGLTLLDTIQNTVGAISLLADAI 88

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL 138
                  L   AF EAVH+ ++  I ++L
Sbjct: 89  TEHEEAVLTNIAFMEAVHARSYSSIFSTL 117


>gi|225870271|ref|YP_002746218.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus equi
           subsp. equi 4047]
 gi|225699675|emb|CAW93380.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus equi subsp. equi 4047]
          Length = 319

 Score = 36.6 bits (83), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L+  E+ ++ +  G     +++ + + V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRR---LSAVEKDLVGKVFGGLTLLDTMQSESGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            AI + +  P     L    F E+VH+ ++  I ++L
Sbjct: 75  EAIRKDVRTPHEEAVLNNIQFMESVHAKSYSSIFSTL 111


>gi|183981661|ref|YP_001849952.1| ribonucleoside-diphosphate reductase (beta chain) NrdF2
           [Mycobacterium marinum M]
 gi|183174987|gb|ACC40097.1| ribonucleoside-diphosphate reductase (beta chain) NrdF2
           [Mycobacterium marinum M]
          Length = 324

 Score = 36.6 bits (83), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 27/119 (22%), Positives = 53/119 (44%), Gaps = 7/119 (5%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  W +   LT  E+ +  R        +++      +++     
Sbjct: 32  TGNFWLPEKVPVSNDIPSWGT---LTAGEKQLTMRVFTGLTMLDTIQGTVGAVSLIPDAL 88

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR---EVPSITAKANWALQY 165
            P     L   AF E+VH+ ++  I ++L     E+ + +R   E  ++  KA   L+Y
Sbjct: 89  TPHEEAVLTNIAFMESVHAKSYSQIFSTL-CSTAEIDDAFRWSEENSNLQRKAEIVLEY 146


>gi|319899230|ref|YP_004159323.1| ribonucleoside-diphosphate reductase beta chain [Bartonella
           clarridgeiae 73]
 gi|319403194|emb|CBI76753.1| ribonucleoside-diphosphate reductase beta chain [Bartonella
           clarridgeiae 73]
          Length = 324

 Score = 36.6 bits (83), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 3/87 (3%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           N W+P +VP+ +D+  W S   LT++ER +  R        +++      +++       
Sbjct: 34  NFWLPEKVPLSNDIPSWAS---LTEEERKLTIRVFTGLTLLDTVQNTVGAISLMADAVTE 90

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSL 138
                L   AF EAVH+ ++  I ++L
Sbjct: 91  HEEAVLTNIAFMEAVHARSYSSIFSTL 117


>gi|229189534|ref|ZP_04316550.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           ATCC 10876]
 gi|228593979|gb|EEK51782.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           ATCC 10876]
          Length = 322

 Score = 36.6 bits (83), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 5/121 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W   E+ +  D   W     L+ +E++  KR LG     ++      +  +  HL N + 
Sbjct: 26  WTEEEIAVSSDKNTWVQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLVLVHLENLQA 82

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSS 171
           +  L      E VH+ ++ +I T+L  +E   ++F+     P +  KA     Y + L  
Sbjct: 83  KSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFDWVDNHPLLEKKAGIITSYYRRLLK 142

Query: 172 P 172
           P
Sbjct: 143 P 143


>gi|118617484|ref|YP_905816.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           ulcerans Agy99]
 gi|118569594|gb|ABL04345.1| ribonucleoside-diphosphate reductase (beta chain) NrdF2
           [Mycobacterium ulcerans Agy99]
          Length = 324

 Score = 36.6 bits (83), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 27/119 (22%), Positives = 53/119 (44%), Gaps = 7/119 (5%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  W +   LT  E+ +  R        +++      +++     
Sbjct: 32  TGNFWLPEKVPVSNDIPSWGT---LTAGEKQLTMRVFTGLTMLDTIQGTVGAVSLIPDAL 88

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR---EVPSITAKANWALQY 165
            P     L   AF E+VH+ ++  I ++L     E+ + +R   E  ++  KA   L+Y
Sbjct: 89  TPHEEAVLTNIAFMESVHAKSYSQIFSTL-CSTAEIDDAFRWSEENSNLQRKAEIVLEY 146


>gi|322411231|gb|EFY02139.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           dysgalactiae subsp. dysgalactiae ATCC 27957]
          Length = 337

 Score = 36.6 bits (83), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 3/90 (3%)

Query: 49  ACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHL 108
              N W+P +VP+ +DL  W+S   L +D + +I RN       +++ A    +A  +H 
Sbjct: 44  VTQNFWLPEKVPVSNDLTSWRS---LGEDWQQLITRNYTGLTLLDTVQATVGDVAQIQHS 100

Query: 109 SNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
                +      AF  A+H+ ++  I ++L
Sbjct: 101 QTDHEQVIYTNFAFMVAIHARSYGTIFSTL 130


>gi|49475007|ref|YP_033048.1| ribonucleotide-diphosphate reductase subunit beta [Bartonella
           henselae str. Houston-1]
 gi|49237812|emb|CAF27007.1| Ribonucleotide reductase beta-chain [Bartonella henselae str.
           Houston-1]
          Length = 324

 Score = 36.6 bits (83), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 3/88 (3%)

Query: 51  NNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSN 110
            N W+P +VP+ +D+  W S   LT++ER +  R        +++      +++      
Sbjct: 33  GNFWLPEKVPLSNDIPSWAS---LTEEERKLTIRVFTGLTLLDTIQNTVGAISLMADAIT 89

Query: 111 PECRQYLLRQAFEEAVHSHTFQYIITSL 138
                 L   AF EAVH+ ++  I ++L
Sbjct: 90  EHEEAVLTNIAFMEAVHARSYSSIFSTL 117


>gi|163939261|ref|YP_001644145.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           weihenstephanensis KBAB4]
 gi|229010750|ref|ZP_04167947.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
           DSM 2048]
 gi|229132251|ref|ZP_04261107.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-ST196]
 gi|229166287|ref|ZP_04294046.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH621]
 gi|163861458|gb|ABY42517.1| Ribonucleoside-diphosphate reductase [Bacillus weihenstephanensis
           KBAB4]
 gi|228617232|gb|EEK74298.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH621]
 gi|228651189|gb|EEL07168.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-ST196]
 gi|228750424|gb|EEM00253.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
           DSM 2048]
          Length = 322

 Score = 36.6 bits (83), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 50/121 (41%), Gaps = 5/121 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W   E+ +  D   W     L+ +E++  KR LG     ++      +  +  HL N + 
Sbjct: 26  WTEEEIAVSSDKNTWAQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLVLVHLENLQA 82

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSS 171
           +  L      E VH+ ++ +I T+L  +E   ++F      P +  KA     Y + L  
Sbjct: 83  KSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFEWVDNHPLLEKKAGIVTSYYRRLLK 142

Query: 172 P 172
           P
Sbjct: 143 P 143


>gi|84386981|ref|ZP_00990005.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
           splendidus 12B01]
 gi|86148466|ref|ZP_01066756.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp.
           MED222]
 gi|218709927|ref|YP_002417548.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           splendidus LGP32]
 gi|84378271|gb|EAP95130.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
           splendidus 12B01]
 gi|85833763|gb|EAQ51931.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp.
           MED222]
 gi|218322946|emb|CAV19123.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           splendidus LGP32]
          Length = 377

 Score = 36.6 bits (83), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 3/106 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   N L + E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSSDRIDY---NKLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPEV 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKA 159
             ++   +F E +HS ++ +II ++  D G +F+   E   I  +A
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIVNDPGVVFDDIVENEEILKRA 151


>gi|157955376|gb|ABW06076.1| NrdF [Bacillus thuringiensis serovar morrisoni]
          Length = 322

 Score = 36.6 bits (83), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 5/121 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W   E+ +  D   W     L+ +E++  KR LG     ++      +  +  HL N + 
Sbjct: 26  WTEEEIAVSSDKNTWVQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLVLVHLENLQA 82

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSS 171
           +  L      E VH+ ++ +I T+L  +E   ++F+     P +  KA     Y + L  
Sbjct: 83  KSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFDWVDNHPLLEKKAGIITSYHRRLLK 142

Query: 172 P 172
           P
Sbjct: 143 P 143


>gi|332170225|gb|AEE19480.1| ATP-cone domain protein [Krokinobacter diaphorus 4H-3-7-5]
          Length = 425

 Score = 36.6 bits (83), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 79/180 (43%), Gaps = 17/180 (9%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
           QA +++ N+ +KR+         L P +Y   ++   +  +++W+ TE     D+  +K+
Sbjct: 96  QAQKRKTNIFEKRI--------NLKPYEYPQLYDYVPAIRHSYWIHTEYNFTSDIQDFKT 147

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
           +  +TD ER  IK  +   +  E  V       IY  +  PE        A  E  H+  
Sbjct: 148 R--ITDVERSAIKNTMLAISQIEVAV-KGFWGDIYHKMPKPEVGAVGATFAESEVRHADA 204

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSL 190
           + +++  LGL++   F + ++ P +  +    +QY +T    +    NK     IL  SL
Sbjct: 205 YSHLLEILGLNKE--FKLLKKKPVMMKR----VQYLETALKNAKSEDNKEYSESILLFSL 258


>gi|157955332|gb|ABW06043.1| NrdF [Bacillus thuringiensis serovar galleriae]
 gi|157955344|gb|ABW06052.1| NrdF [Bacillus thuringiensis serovar tolworthi]
          Length = 322

 Score = 36.6 bits (83), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 5/122 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W   E+ +  D   W     L+ +E++  KR LG     ++      +  +  HL N + 
Sbjct: 26  WTEEEIAVSSDKNTWVQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLVLVHLENLQA 82

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSS 171
           +  L      E VH+ ++ +I T+L  +E   ++F+     P +  KA     Y + L  
Sbjct: 83  KSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFDWVDNHPLLEKKAGIITSYHRRLLK 142

Query: 172 PS 173
           P 
Sbjct: 143 PE 144


>gi|312862767|ref|ZP_07723007.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           vestibularis F0396]
 gi|322516573|ref|ZP_08069487.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           vestibularis ATCC 49124]
 gi|311101627|gb|EFQ59830.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           vestibularis F0396]
 gi|322124843|gb|EFX96267.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           vestibularis ATCC 49124]
          Length = 320

 Score = 36.6 bits (83), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L+  E+ ++ +  G     +++ +   V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSAKEKDLVGKVFGGLTLLDTMQSQTGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            AI   +  P     L    F E+VH+ ++  I ++L
Sbjct: 75  EAIRADVRTPHEEAVLNNIQFMESVHAKSYSSIFSTL 111


>gi|328480216|gb|EGF49142.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           rhamnosus MTCC 5462]
          Length = 115

 Score = 36.6 bits (83), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+S   L+ DE+ ++    G     ++L + + +
Sbjct: 21  TWEKL---TEQFWLDTRIPLSNDLDDWRS---LSPDEQWVVGHVFGGLTLLDTLQSQDGM 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            ++ +++   +    L    F E+VH+ ++  I ++L
Sbjct: 75  ASLRQNIRTQQETAVLNNIQFMESVHAKSYSSIFSTL 111


>gi|319404590|emb|CBI78196.1| ribonucleoside-diphosphate reductase beta chain [Bartonella
           rochalimae ATCC BAA-1498]
 gi|319407580|emb|CBI81230.1| ribonucleoside-diphosphate reductase beta chain [Bartonella sp.
           1-1C]
          Length = 324

 Score = 36.6 bits (83), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 3/88 (3%)

Query: 51  NNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSN 110
            N W+P +VP+ +D+  W S   LT++ER +  R        +++      +++      
Sbjct: 33  GNFWLPEKVPLSNDIPSWAS---LTEEERKLTIRVFTGLTLLDTVQNTVGAISLMADAVT 89

Query: 111 PECRQYLLRQAFEEAVHSHTFQYIITSL 138
                 L   AF EAVH+ ++  I ++L
Sbjct: 90  EHEEAVLTNIAFMEAVHARSYSSIFSTL 117


>gi|218233288|ref|YP_002366135.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus
           B4264]
 gi|229149653|ref|ZP_04277884.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           m1550]
 gi|157955328|gb|ABW06040.1| NrdF [Bacillus thuringiensis serovar entomocidus]
 gi|157955388|gb|ABW06085.1| NrdF [Bacillus thuringiensis serovar subtoxicus]
 gi|157955409|gb|ABW06101.1| NrdF [Bacillus cereus]
 gi|218161245|gb|ACK61237.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           B4264]
 gi|228633863|gb|EEK90461.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           m1550]
          Length = 322

 Score = 36.6 bits (83), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 5/121 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W   E+ +  D   W     L+ +E++  KR LG     ++      +  +  HL N + 
Sbjct: 26  WTEEEIAVSSDKNTWVQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLVLVHLENLQA 82

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSS 171
           +  L      E VH+ ++ +I T+L  +E   ++F+     P +  KA     Y + L  
Sbjct: 83  KSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFDWVDNHPLLEKKAGIITSYYRRLLK 142

Query: 172 P 172
           P
Sbjct: 143 P 143


>gi|229102053|ref|ZP_04232765.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-28]
 gi|228681373|gb|EEL35538.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-28]
          Length = 322

 Score = 36.6 bits (83), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 5/121 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W   E+ +  D   W     L+ +E++  KR LG     ++      +  +  HL N + 
Sbjct: 26  WTEEEIAVSSDKNTWAQ---LSKEEQVAYKRVLGGLTLLDTKQGGEGMPLVLVHLENLQA 82

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSS 171
           +  L      E VH+ ++ +I T+L  +E   ++F      P +  KA    +Y + L  
Sbjct: 83  KSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFEWVDNHPLLEKKAGIITRYYRRLLK 142

Query: 172 P 172
           P
Sbjct: 143 P 143


>gi|157955336|gb|ABW06046.1| NrdF [Bacillus thuringiensis serovar kurstaki]
          Length = 322

 Score = 36.6 bits (83), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 5/121 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W   E+ +  D   W     L+ +E++  KR LG     ++      +  +  HL N + 
Sbjct: 26  WTEEEIAVSSDKNTWVQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLVLVHLENLQA 82

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSS 171
           +  L      E VH+ ++ +I T+L  +E   ++F+     P +  KA     Y + L  
Sbjct: 83  KSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFDWVDNHPLLEKKAGIITSYYRRLLK 142

Query: 172 P 172
           P
Sbjct: 143 P 143


>gi|323494790|ref|ZP_08099889.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           brasiliensis LMG 20546]
 gi|323310983|gb|EGA64148.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           brasiliensis LMG 20546]
          Length = 377

 Score = 36.6 bits (83), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 3/116 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   N L + E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSSDRIDY---NKLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPEV 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
             ++   +F E +HS ++ +II ++  D G +F+   E   I  +A     Y   L
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIVNDPGLVFDDIVENEHILKRAEDISHYYDDL 161


>gi|157955305|gb|ABW06022.1| NrdF [Bacillus thuringiensis serovar aizawai]
 gi|157955352|gb|ABW06058.1| NrdF [Bacillus thuringiensis serovar colmeri]
 gi|157955372|gb|ABW06073.1| NrdF [Bacillus thuringiensis serovar indiana]
 gi|157955405|gb|ABW06098.1| NrdF [Bacillus thuringiensis serovar wuhanensis]
          Length = 322

 Score = 36.6 bits (83), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 5/122 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W   E+ +  D   W     L+ +E++  KR LG     ++      +  +  HL N + 
Sbjct: 26  WTEEEIAVSSDKNTWVQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLVLVHLENLQA 82

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSS 171
           +  L      E VH+ ++ +I T+L  +E   ++F+     P +  KA     Y + L  
Sbjct: 83  KSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFDWVDNHPLLEKKAGIITSYYRRLLK 142

Query: 172 PS 173
           P 
Sbjct: 143 PE 144


>gi|33620698|ref|NP_891801.1| aerobic NDP reductase small subunit [Enterobacteria phage RB49]
 gi|33438568|gb|AAL15125.2| aerobic NDP reductase small subunit [Enterobacteria phage RB49]
          Length = 386

 Score = 36.6 bits (83), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 30/149 (20%), Positives = 58/149 (38%), Gaps = 12/149 (8%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P E+ +  D   + +   + D E+     NL +    +S+       A    +S+P  
Sbjct: 47  WRPEEISLATDRIQYLN---MGDVEKRFFTENLKYQTLLDSIQGRAPSAAFGPIVSDPTL 103

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL---- 169
             +L    F E +HS ++ +I+ +  +D    F+   + P+I  +A    +Y   +    
Sbjct: 104 DTWLQTWTFSETIHSRSYTHIMRNCFIDPASEFDQIIDNPAIMKRAESIGKYYDDVLYWI 163

Query: 170 -----SSPSFHYWNKRRRSRILTRSLRFL 193
                +     YW +R     L  + RF 
Sbjct: 164 RKYENAKEDLRYWEERDDQTALDDARRFF 192


>gi|145223648|ref|YP_001134326.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           gilvum PYR-GCK]
 gi|315443974|ref|YP_004076853.1| ribonucleotide reductase subunit beta [Mycobacterium sp. Spyr1]
 gi|238055306|sp|A4TB76|RIR2H_MYCGI RecName: Full=R2-like ligand binding oxidase; AltName:
           Full=Ribonucleotide reductase R2 subunit homolog;
           AltName: Full=Ribonucleotide reductase small subunit
           homolog
 gi|145216134|gb|ABP45538.1| putative ribonucleoside-diphosphate reductase (beta chain)
           [Mycobacterium gilvum PYR-GCK]
 gi|315262277|gb|ADT99018.1| ribonucleotide reductase, beta subunit [Mycobacterium sp. Spyr1]
          Length = 312

 Score = 36.6 bits (83), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 5/91 (5%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNI--VLAIYRHLSNP 111
           W P ++    D A W+S   L+  ER    R    F + E  V  +I   +A  R     
Sbjct: 32  WDPADIDFSRDRADWES---LSTMERDWATRLCAEFIAGEEAVTQDIQPFMAAMRAEGRL 88

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSLGLDE 142
               YL + AFEEA H+  F+  + ++G+ E
Sbjct: 89  GDEMYLTQFAFEEAKHTQVFRMWLDAVGITE 119


>gi|328768069|gb|EGF78116.1| hypothetical protein BATDEDRAFT_37293 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 356

 Score = 36.6 bits (83), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 8/133 (6%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+++   W+ Y +   N W   EV M DDL  ++    L+  E+ ++ +         
Sbjct: 29  LFPIQFNEIWQAYKNLEANFWSAEEVEMSDDLNGFEQ---LSRKEQSLMLQITSILCMGC 85

Query: 94  SLVANNIVLAIYR-HLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE---GELFNMY 149
            L  N  +L+ Y   +  PE R +   Q  ++ +HS     I+      E    +L ++ 
Sbjct: 86  GL-NNEAILSRYSDEIQIPEARCFFGFQLMQKNIHSELSMVILDMFSESEKQRDDLLDVI 144

Query: 150 REVPSITAKANWA 162
           +++PS T    WA
Sbjct: 145 QQLPSRTMWTEWA 157


>gi|170017903|ref|YP_001728822.1| ribonucleotide reductase, beta subunit [Leuconostoc citreum KM20]
 gi|169804760|gb|ACA83378.1| Ribonucleotide reductase, beta subunit [Leuconostoc citreum KM20]
          Length = 324

 Score = 36.6 bits (83), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 15/126 (11%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    ++D ER  +    G   + ++L + + +
Sbjct: 25  TWEK---LTQQFWLDTRIPISNDLRTWRGN--MSDQERQTLNLVFGGLTTLDTLQSQDGM 79

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSIT--AKA 159
            ++   + N +    L    F E+VH+ ++  I  +L        N   E+ +I   A +
Sbjct: 80  ASLKLDVVNQKEEAVLNNIQFMESVHAKSYSSIFETL--------NEKSEIEAIFDWADS 131

Query: 160 NWALQY 165
           N  LQY
Sbjct: 132 NEFLQY 137


>gi|157955319|gb|ABW06033.1| NrdF [Bacillus thuringiensis serovar pakistani]
          Length = 322

 Score = 36.6 bits (83), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 5/121 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W   E+ +  D   W     L+ +E++  KR LG     ++      +  +  HL N + 
Sbjct: 26  WTEEEIAVSSDKNTWVQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLVLVHLENLQA 82

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSS 171
           +  L      E VH+ ++ +I T+L  +E   ++F+     P +  KA     Y + L  
Sbjct: 83  KSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFDWVDNHPLLEKKAGIITSYYRRLLK 142

Query: 172 P 172
           P
Sbjct: 143 P 143


>gi|163748931|ref|ZP_02156182.1| ribonucleotide-diphosphate reductase beta subunit [Shewanella
           benthica KT99]
 gi|161331307|gb|EDQ02195.1| ribonucleotide-diphosphate reductase beta subunit [Shewanella
           benthica KT99]
          Length = 376

 Score = 36.6 bits (83), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 20/176 (11%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSA-CNNHWMPTEVPM 61
           NN  L P+  G+  VNV       AR DV      KY   +EK +    +  W P EV +
Sbjct: 11  NNACLEPMFMGQS-VNV-------ARYDVQ-----KYE-VFEKLIEKQLSFFWRPEEVDV 56

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D   + +   L D E+ +   NL +    +S+   +  +A    +S PE   ++   +
Sbjct: 57  SKDKIDYAA---LPDHEKHIFISNLKYQTLLDSIQGRSPNVAFLPLVSLPELETWIETWS 113

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLS--SPSFH 175
           F E +HS ++ +II ++  D   +F+   +   I  +A    QY   L   + +FH
Sbjct: 114 FSETIHSRSYTHIIRNIVNDPSIIFDDIVKNEEILKRATDIAQYYDDLILLTQAFH 169


>gi|108801178|ref|YP_641375.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           sp. MCS]
 gi|119870310|ref|YP_940262.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           sp. KMS]
 gi|123069734|sp|Q1B465|RIR2H_MYCSS RecName: Full=R2-like ligand binding oxidase; AltName:
           Full=Ribonucleotide reductase R2 subunit homolog;
           AltName: Full=Ribonucleotide reductase small subunit
           homolog
 gi|238055309|sp|A1UKW4|RIR2H_MYCSK RecName: Full=R2-like ligand binding oxidase; AltName:
           Full=Ribonucleotide reductase R2 subunit homolog;
           AltName: Full=Ribonucleotide reductase small subunit
           homolog
 gi|108771597|gb|ABG10319.1| putative ribonucleoside-diphosphate reductase (beta chain) NrdB
           (ribonucleotide reductase small chain) [Mycobacterium
           sp. MCS]
 gi|119696399|gb|ABL93472.1| putative ribonucleoside-diphosphate reductase [Mycobacterium sp.
           KMS]
          Length = 312

 Score = 36.6 bits (83), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 5/89 (5%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNI--VLAIYRHLSNP 111
           W P ++    D A W+S + L   ER    R    F + E  V  +I   +A  R     
Sbjct: 32  WDPADIDFSRDRADWESLSNL---ERDWATRLCAQFIAGEEAVTQDIQPFMAAMRAEGRL 88

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
               YL + AFEEA H+  F+  + ++G+
Sbjct: 89  GDEMYLTQFAFEEAKHTQVFRMWLDAVGM 117


>gi|30019505|ref|NP_831136.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus
           ATCC 14579]
 gi|229043194|ref|ZP_04190917.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH676]
 gi|229078637|ref|ZP_04211194.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock4-2]
 gi|229108909|ref|ZP_04238513.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock1-15]
 gi|229126769|ref|ZP_04255781.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-Cer4]
 gi|229144056|ref|ZP_04272472.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-ST24]
 gi|296502033|ref|YP_003663733.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           thuringiensis BMB171]
 gi|29895049|gb|AAP08337.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           ATCC 14579]
 gi|157955310|gb|ABW06026.1| NrdF [Bacillus thuringiensis serovar canadensis]
 gi|157955392|gb|ABW06088.1| NrdF [Bacillus thuringiensis serovar thompsoni]
 gi|157955396|gb|ABW06091.1| NrdF [Bacillus thuringiensis serovar tohokuensis]
 gi|228639453|gb|EEK95867.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-ST24]
 gi|228656709|gb|EEL12535.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-Cer4]
 gi|228674565|gb|EEL29805.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock1-15]
 gi|228704707|gb|EEL57136.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock4-2]
 gi|228726156|gb|EEL77390.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH676]
 gi|296323085|gb|ADH06013.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           thuringiensis BMB171]
          Length = 322

 Score = 36.6 bits (83), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 5/121 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W   E+ +  D   W     L+ +E++  KR LG     ++      +  +  HL N + 
Sbjct: 26  WTEEEIAVSSDKNTWVQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLVLVHLENLQA 82

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSS 171
           +  L      E VH+ ++ +I T+L  +E   ++F+     P +  KA     Y + L  
Sbjct: 83  KSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFDWVDNHPLLEKKAGIITSYYRRLLK 142

Query: 172 P 172
           P
Sbjct: 143 P 143


>gi|227510692|ref|ZP_03940741.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           brevis subsp. gravesensis ATCC 27305]
 gi|227513708|ref|ZP_03943757.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           buchneri ATCC 11577]
 gi|227522501|ref|ZP_03952550.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           hilgardii ATCC 8290]
 gi|227083027|gb|EEI18339.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           buchneri ATCC 11577]
 gi|227090323|gb|EEI25635.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           hilgardii ATCC 8290]
 gi|227189813|gb|EEI69880.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           brevis subsp. gravesensis ATCC 27305]
          Length = 318

 Score = 36.6 bits (83), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 24/108 (22%), Positives = 50/108 (46%), Gaps = 8/108 (7%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL+ W++   L  D + ++    G     ++L +   +
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLSDWRT---LDQDHQWVVGHVFGGLTLLDTLQSQEGM 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFN 147
            ++ + +  P     L    F E+VH+ ++  I ++L   E   E+F+
Sbjct: 75  ASLRKDVQTPHETAVLNNIQFMESVHAKSYSSIFSTLNTPEQIDEIFD 122


>gi|319406095|emb|CBI79725.1| ribonucleoside-diphosphate reductase beta chain [Bartonella sp. AR
           15-3]
          Length = 324

 Score = 36.6 bits (83), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 3/88 (3%)

Query: 51  NNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSN 110
            N W+P +VP+ +D+  W S   LT++ER +  R        +++      +++      
Sbjct: 33  GNFWLPEKVPLSNDIPSWAS---LTEEERKLTIRVFTGLTLLDTVQNTVGAISLIADAVT 89

Query: 111 PECRQYLLRQAFEEAVHSHTFQYIITSL 138
                 L   AF EAVH+ ++  I ++L
Sbjct: 90  EHEEAVLTNIAFMEAVHARSYSSIFSTL 117


>gi|332141553|ref|YP_004427291.1| ribonucleotide-diphosphate reductase subunit beta [Alteromonas
           macleodii str. 'Deep ecotype']
 gi|327551575|gb|AEA98293.1| ribonucleotide-diphosphate reductase subunit beta [Alteromonas
           macleodii str. 'Deep ecotype']
          Length = 376

 Score = 36.6 bits (83), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 3/93 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   ++    LTD E+ +   NL +    +S+   +  +A    +S PE 
Sbjct: 49  WRPEEVDVSRDRVDFQK---LTDPEKHIFISNLKYQTLLDSVQGRSPNIAFLPIISLPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELF 146
             ++   +F E +HS ++ +I+ +L  D  E+F
Sbjct: 106 ETWVETWSFFETIHSRSYTHILRNLFSDPSEIF 138


>gi|319408170|emb|CBI81823.1| ribonucleoside-diphosphate reductase beta chain [Bartonella
           schoenbuchensis R1]
          Length = 324

 Score = 36.6 bits (83), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 3/88 (3%)

Query: 51  NNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSN 110
            N W+P +VP+ +D+  W S   LT++ER +  R        +++      +++      
Sbjct: 33  GNFWLPEKVPLSNDIPSWAS---LTEEERKLTIRVFTGLTLLDTVQNTVGAISLMADAIT 89

Query: 111 PECRQYLLRQAFEEAVHSHTFQYIITSL 138
                 L   AF EAVH+ ++  I ++L
Sbjct: 90  EHEEAVLTNIAFMEAVHARSYSSIFSTL 117


>gi|90581239|ref|ZP_01237037.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio angustum
           S14]
 gi|90437610|gb|EAS62803.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio angustum
           S14]
          Length = 377

 Score = 36.6 bits (83), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 3/123 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   N L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSGDRINY---NNLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPIVSLPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
             ++   +F E +HS ++ +II ++  +   +F+   E   I  +A    +Y   L S +
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIVNNPSVVFDDIVENEHIIKRAGDISKYYDALISAT 165

Query: 174 FHY 176
             Y
Sbjct: 166 NDY 168


>gi|326381484|ref|ZP_08203178.1| Ribonucleoside-diphosphate reductase [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326199731|gb|EGD56911.1| Ribonucleoside-diphosphate reductase [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 333

 Score = 36.2 bits (82), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 20/89 (22%), Positives = 40/89 (44%), Gaps = 3/89 (3%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  W +   LTD E+ +  R        +++      +++     
Sbjct: 41  TGNFWLPEKVPVSNDIPSWGT---LTDYEKTLTMRVFTGLTLLDTIQGTVGAISLIPDAL 97

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            P         AF E+VH+ ++  I ++L
Sbjct: 98  TPHEEAVYTNIAFMESVHAKSYSSIFSTL 126


>gi|310830452|ref|YP_003965553.1| Ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           polymyxa SC2]
 gi|309249919|gb|ADO59485.1| Ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           polymyxa SC2]
          Length = 342

 Score = 36.2 bits (82), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 25/113 (22%), Positives = 54/113 (47%), Gaps = 6/113 (5%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           ++ Y     NHW+P+E+PM  D + +     L  + +   KR +G  A  +S+     V 
Sbjct: 38  YKLYRVLIGNHWIPSEIPMNVDKSDFPM---LPTNTQNTFKRIIGLLAVLDSM-QTMFVG 93

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELFNMYREVP 153
            +  +L++            +E +H+ ++ Y+++SL    ++ E+F  ++  P
Sbjct: 94  DVREYLTDSSLEAVAAIIGQQEVIHNQSYSYVLSSLVSYTEQLEIFEYWKNDP 146


>gi|222153355|ref|YP_002562532.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           uberis 0140J]
 gi|222114168|emb|CAR42683.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus uberis 0140J]
          Length = 319

 Score = 36.2 bits (82), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L+  E+ ++ +  G     +++ +   V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSAQEKDLVGKVFGGLTLLDTMQSETGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            AI   +  P     L    F E+VH+ ++  I ++L
Sbjct: 75  EAIRADVRTPHEEAVLNNIQFMESVHAKSYSSIFSTL 111


>gi|217958930|ref|YP_002337478.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           AH187]
 gi|222095086|ref|YP_002529146.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           Q1]
 gi|229138141|ref|ZP_04266739.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-ST26]
 gi|229195650|ref|ZP_04322416.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           m1293]
 gi|217065393|gb|ACJ79643.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           AH187]
 gi|221239144|gb|ACM11854.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           Q1]
 gi|228587899|gb|EEK45951.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           m1293]
 gi|228645486|gb|EEL01720.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-ST26]
          Length = 193

 Score = 36.2 bits (82), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 50/121 (41%), Gaps = 5/121 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W   E+ +  D   W     L+ +E++  KR LG     ++      +  +  HL N + 
Sbjct: 26  WTEEEIAVSSDKNTWVQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLVLVHLENLQA 82

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSS 171
           +  L      E VH+ ++ +I T+L  +E   ++F      P +  KA     Y + L  
Sbjct: 83  KSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFEWVDNHPLLEKKAGIITSYYRRLLK 142

Query: 172 P 172
           P
Sbjct: 143 P 143


>gi|113200701|ref|YP_717864.1| ribonucleotide reductase subunit B [Synechococcus phage syn9]
 gi|76574600|gb|ABA47165.1| ribonucleotide reductase subunit B [Synechococcus phage syn9]
          Length = 387

 Score = 36.2 bits (82), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 24/107 (22%), Positives = 51/107 (47%), Gaps = 3/107 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +Q D + +     LT++++ +   NL +    +S+      +A   + S PE 
Sbjct: 58  WRPEEVSLQKDRSDYAQ---LTENQKHIFTSNLKYQIMLDSVQGRGPGMAFIPYCSLPEL 114

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKAN 160
              +    F E +HS ++ +II ++  +  ++F+   E   +  +A+
Sbjct: 115 EACMTVWEFMEMIHSRSYTHIIKNVYPNPSDVFDTILEDERVLERAS 161


>gi|22536982|ref|NP_687833.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           agalactiae 2603V/R]
 gi|25010891|ref|NP_735286.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           agalactiae NEM316]
 gi|76788606|ref|YP_329564.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           agalactiae A909]
 gi|76799231|ref|ZP_00781405.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae 18RS21]
 gi|77405557|ref|ZP_00782648.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae H36B]
 gi|77408849|ref|ZP_00785576.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae COH1]
 gi|77413113|ref|ZP_00789313.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae 515]
 gi|22533837|gb|AAM99705.1|AE014229_6 ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           agalactiae 2603V/R]
 gi|23095270|emb|CAD46480.1| Unknown [Streptococcus agalactiae NEM316]
 gi|76563663|gb|ABA46247.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           agalactiae A909]
 gi|76585414|gb|EAO61998.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae 18RS21]
 gi|77160814|gb|EAO71925.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae 515]
 gi|77172535|gb|EAO75677.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae COH1]
 gi|77175864|gb|EAO78642.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae H36B]
 gi|319744839|gb|EFV97177.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           agalactiae ATCC 13813]
          Length = 319

 Score = 36.2 bits (82), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L+  E+ ++ +  G     +++ +   V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSAQEKDLVGKVFGGLTLLDTMQSETGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            AI   +  P     L    F E+VH+ ++  I ++L
Sbjct: 75  EAIRADVRTPHEEAVLNNIQFMESVHAKSYSSIFSTL 111


>gi|325284717|ref|YP_004264180.1| Ribonucleoside-diphosphate reductase [Deinococcus proteolyticus
           MRP]
 gi|324316206|gb|ADY27320.1| Ribonucleoside-diphosphate reductase [Deinococcus proteolyticus
           MRP]
          Length = 348

 Score = 36.2 bits (82), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 68/157 (43%), Gaps = 18/157 (11%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER-LMIKRNLGFFASSESLVANNIV 101
           +EKY S     W P E+P+ +D  +WKS   L++ ER   I  + G   ++   +   + 
Sbjct: 25  YEKYTSQL---WFPEEIPLSNDAIVWKS---LSEAERWTYIHASAGL--NALDTLQGEVG 76

Query: 102 LAIYRHLSNPECRQYLLR-QAFEEAVHSHTFQ-----YIITSLGLDEGELFNMYREVPSI 155
           +   RHL +   R+  ++ Q   E +H+ ++      ++ TS   +E E+F   R  P +
Sbjct: 77  MPALRHLVDGHIRKATIQFQGMMEDIHAKSYSLMNKTFLTTS---EEREVFEWVRTQPQL 133

Query: 156 TAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             K     +        +   W K   S +L  +L +
Sbjct: 134 QNKIAMIREIYDNPDVSNLGLWKKMVVSCMLETALFY 170


>gi|260778827|ref|ZP_05887719.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260604991|gb|EEX31286.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 377

 Score = 36.2 bits (82), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 3/116 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   N L + E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSSDRIDY---NKLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPEV 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
             ++   +F E +HS ++ +II ++  D G +F+   E   I  +A     Y   L
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIVNDPGLVFDDIVENEHILKRAEDISHYYDDL 161


>gi|239993885|ref|ZP_04714409.1| ribonucleotide-diphosphate reductase subunit beta [Alteromonas
           macleodii ATCC 27126]
          Length = 376

 Score = 36.2 bits (82), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 3/93 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   ++    LTD E+ +   NL +    +S+   +  +A    +S PE 
Sbjct: 49  WRPEEVDVSRDRVDFQK---LTDPEKHIFISNLKYQTLLDSVQGRSPNIAFLPIISLPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELF 146
             ++   +F E +HS ++ +I+ +L  D  E+F
Sbjct: 106 ETWVETWSFFETIHSRSYTHILRNLFSDPSEIF 138


>gi|229029125|ref|ZP_04185222.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH1271]
 gi|228732183|gb|EEL83068.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH1271]
          Length = 322

 Score = 36.2 bits (82), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 5/121 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W   E+ +  D   W     L+ +E++  KR LG     ++      +  +  HL N + 
Sbjct: 26  WTEEEIAVSSDKNTWVQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLVLVHLENLQA 82

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSS 171
           +  L      E VH+ ++ +I T+L  +E   ++F+     P +  KA     Y + L  
Sbjct: 83  KSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFDWVDNHPLLEKKAGIITGYYRRLLK 142

Query: 172 P 172
           P
Sbjct: 143 P 143


>gi|89092731|ref|ZP_01165684.1| ribonucleotide-diphosphate reductase beta subunit [Oceanospirillum
           sp. MED92]
 gi|89083243|gb|EAR62462.1| ribonucleotide-diphosphate reductase beta subunit [Oceanospirillum
           sp. MED92]
          Length = 376

 Score = 36.2 bits (82), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 3/107 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D    K    + + E+ +   NL +    +S+   +  +A    +S PE 
Sbjct: 49  WRPEEVDLSTDR---KDFMNMPEHEKHIFLSNLKYQTLLDSVQGRSPNIAFLPVVSLPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKAN 160
             +    AF E +HS ++ +II ++  +  E+F+     P I  +A+
Sbjct: 106 ETWFETWAFSETIHSRSYTHIIRNIITEPSEVFDQIVTNPEIIRRAD 152


>gi|297243045|ref|ZP_06926983.1| ribonucleotide reductase, beta subunit [Gardnerella vaginalis AMD]
 gi|296889256|gb|EFH27990.1| ribonucleotide reductase, beta subunit [Gardnerella vaginalis AMD]
          Length = 364

 Score = 36.2 bits (82), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 10/102 (9%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR---NLGFFASSESLVANNIVLAIYRHL 108
           N W+P +VP+ +D+  W+S   LTD ER    R    L    +S++ +     L    H 
Sbjct: 74  NFWLPEKVPLSNDIPSWRS---LTDLERKTTTRVFTGLTLLDTSQATIGE---LCQIEHA 127

Query: 109 SNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
                +      AF +++H+ ++  I ++L   E E+   YR
Sbjct: 128 RTEHEQAIYTNIAFMQSIHARSYSSIFSTLCSSE-EIDEAYR 168


>gi|75758223|ref|ZP_00738348.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|74494277|gb|EAO57368.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
          Length = 342

 Score = 36.2 bits (82), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 25/122 (20%), Positives = 56/122 (45%), Gaps = 5/122 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W+  E+P+  D  +W   + L  D++ + K+ LG     ++      +  +  H+ +P+ 
Sbjct: 37  WLENEIPVSKDKNVW---DMLPKDQKEVYKKVLGGLTLLDTKQGGEGMPLVSLHMEDPQK 93

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSS 171
           +  +   A  E +H+ ++ +I  +L  +E    +F+   E P +  KA+    + + L  
Sbjct: 94  KAIINFMAMMEDIHAKSYSHIFMTLCENEEVDAVFDWVEENPFLQKKADIITGHYRKLLK 153

Query: 172 PS 173
           P 
Sbjct: 154 PD 155


>gi|329298015|ref|ZP_08255351.1| ribonucleotide-diphosphate reductase subunit beta [Plautia stali
           symbiont]
          Length = 376

 Score = 36.2 bits (82), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 60/125 (48%), Gaps = 4/125 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +++   L + E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSRDRIDYQA---LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
             ++   AF E +HS ++ +II ++  D  ++F+       I A+A    +Y   L   +
Sbjct: 106 ETWVETWAFSETIHSRSYTHIIRNIVNDPSQVFDDIVTNEQILARAQDISKYYDDLIEMT 165

Query: 174 FHYWN 178
            +YW+
Sbjct: 166 -NYWH 169


>gi|25027435|ref|NP_737489.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           efficiens YS-314]
 gi|259506419|ref|ZP_05749321.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
           [Corynebacterium efficiens YS-314]
 gi|23492716|dbj|BAC17689.1| putative ribonucleotide reductase [Corynebacterium efficiens
           YS-314]
 gi|259165992|gb|EEW50546.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
           [Corynebacterium efficiens YS-314]
          Length = 339

 Score = 36.2 bits (82), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 30/145 (20%), Positives = 62/145 (42%), Gaps = 10/145 (6%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P ++P+ +D+  W   N +++ E L   R        +++      +++    +
Sbjct: 46  TTNFWLPEKIPVSNDIQKW---NSMSEAEHLATLRVFTGLTLLDTIQGTVGAVSMIPDAT 102

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYREVPSITAKANWALQYTQ 167
                  L   +F E+VH+ ++  I  +L    +  E F   R    +  KA   L Y Q
Sbjct: 103 THHEEAVLTNISFMESVHAKSYSNIFMTLASTPEINEAFRWSRHNEHLQYKAKRILDYYQ 162

Query: 168 TLSSPSFHYWNKRRRSRILTRSLRF 192
             S+P+     +++ + ++  SL F
Sbjct: 163 QDSTPA-----RKKIASVMLESLLF 182


>gi|75759355|ref|ZP_00739452.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|218896385|ref|YP_002444796.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           G9842]
 gi|228900033|ref|ZP_04064269.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis IBL 4222]
 gi|228920164|ref|ZP_04083513.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228964415|ref|ZP_04125529.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|74493187|gb|EAO56306.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|157955348|gb|ABW06055.1| NrdF [Bacillus thuringiensis serovar alesti]
 gi|157955356|gb|ABW06061.1| NrdF [Bacillus thuringiensis serovar dakota]
 gi|157955360|gb|ABW06064.1| NrdF [Bacillus thuringiensis serovar darmstadiensis]
 gi|157955364|gb|ABW06067.1| NrdF [Bacillus thuringiensis serovar dendrolimus]
 gi|157955380|gb|ABW06079.1| NrdF [Bacillus thuringiensis serovar ostriniae]
 gi|218545942|gb|ACK98336.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           G9842]
 gi|228795272|gb|EEM42764.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|228839620|gb|EEM84912.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228859647|gb|EEN04071.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis IBL 4222]
          Length = 322

 Score = 36.2 bits (82), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 5/122 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W   E+ +  D   W     L+ +E++  KR LG     ++      +  +  HL N + 
Sbjct: 26  WTEEEIAVSSDKNTWVQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLVLVHLENLQA 82

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSS 171
           +  L      E VH+ ++ +I T+L  +E   ++F+     P +  KA     Y + L  
Sbjct: 83  KSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFDWVDNHPLLEKKAGIITGYYRRLLK 142

Query: 172 PS 173
           P 
Sbjct: 143 PE 144


>gi|289606667|emb|CBI61081.1| unnamed protein product [Sordaria macrospora]
          Length = 59

 Score = 36.2 bits (82), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)

Query: 32 NQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMI 82
           Q  P +Y WA++ +      HWMP EVP+ +D   W  K  LT  ER ++
Sbjct: 8  KQYKPFEYPWAFDFWKRQQQIHWMPEEVPLGEDCRDWAQK--LTPHERNLL 56


>gi|298253146|ref|ZP_06976938.1| ribonucleotide reductase, beta subunit [Gardnerella vaginalis 5-1]
 gi|297532541|gb|EFH71427.1| ribonucleotide reductase, beta subunit [Gardnerella vaginalis 5-1]
          Length = 331

 Score = 36.2 bits (82), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 10/102 (9%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR---NLGFFASSESLVANNIVLAIYRHL 108
           N W+P +VP+ +D+  W+S   LTD ER    R    L    +S++ +     L    H 
Sbjct: 41  NFWLPEKVPLSNDIPSWRS---LTDLERKTTTRVFTGLTLLDTSQATIGE---LCQIEHA 94

Query: 109 SNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
                +      AF +++H+ ++  I ++L   E E+   YR
Sbjct: 95  RTEHEQAIYTNIAFMQSIHARSYSSIFSTLCSSE-EIDEAYR 135


>gi|270291189|ref|ZP_06197412.1| ribonucleoside-diphosphate reductase, beta subunit [Pediococcus
           acidilactici 7_4]
 gi|304385474|ref|ZP_07367819.1| ribonucleotide-diphosphate reductase subunit beta [Pediococcus
           acidilactici DSM 20284]
 gi|270280585|gb|EFA26420.1| ribonucleoside-diphosphate reductase, beta subunit [Pediococcus
           acidilactici 7_4]
 gi|304328681|gb|EFL95902.1| ribonucleotide-diphosphate reductase subunit beta [Pediococcus
           acidilactici DSM 20284]
          Length = 317

 Score = 36.2 bits (82), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL+ W+    L +D + ++    G     ++L + + +
Sbjct: 20  TWEK---LTEQFWLDTRIPISNDLSDWRE---LDEDHQWVVGHVFGGLTLLDTLQSQDGM 73

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            A+ + +  P     L    F E+VH+ ++  I  +L
Sbjct: 74  AALRKDVRTPHETAVLNNIQFMESVHAKSYSSIFETL 110


>gi|228904848|ref|ZP_04068902.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis IBL 4222]
 gi|228854862|gb|EEM99466.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis IBL 4222]
          Length = 343

 Score = 36.2 bits (82), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 25/122 (20%), Positives = 56/122 (45%), Gaps = 5/122 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W+  E+P+  D  +W   + L  D++ + K+ LG     ++      +  +  H+ +P+ 
Sbjct: 38  WLENEIPVSKDKNVW---DMLPKDQKEVYKKVLGGLTLLDTKQGGEGMPLVSLHMEDPQK 94

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSS 171
           +  +   A  E +H+ ++ +I  +L  +E    +F+   E P +  KA+    + + L  
Sbjct: 95  KAIINFMAMMEDIHAKSYSHIFMTLCENEEVDAVFDWVEENPFLQKKADIITGHYRKLLK 154

Query: 172 PS 173
           P 
Sbjct: 155 PD 156


>gi|308235083|ref|ZP_07665820.1| ribonucleoside-diphosphate reductase, beta subunit [Gardnerella
           vaginalis ATCC 14018]
 gi|311115217|ref|YP_003986438.1| ribonucleotide-diphosphate reductase subunit beta [Gardnerella
           vaginalis ATCC 14019]
 gi|310946711|gb|ADP39415.1| ribonucleotide-diphosphate reductase subunit beta [Gardnerella
           vaginalis ATCC 14019]
          Length = 364

 Score = 36.2 bits (82), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 10/102 (9%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR---NLGFFASSESLVANNIVLAIYRHL 108
           N W+P +VP+ +D+  W+S   LTD ER    R    L    +S++ +     L    H 
Sbjct: 74  NFWLPEKVPLSNDIPSWRS---LTDLERKTTTRVFTGLTLLDTSQATIGE---LCQIEHA 127

Query: 109 SNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
                +      AF +++H+ ++  I ++L   E E+   YR
Sbjct: 128 RTEHEQAIYTNIAFMQSIHARSYSSIFSTLCSSE-EIDEAYR 168


>gi|148978906|ref|ZP_01815226.1| ribonucleotide-diphosphate reductase beta subunit [Vibrionales
           bacterium SWAT-3]
 gi|145962104|gb|EDK27390.1| ribonucleotide-diphosphate reductase beta subunit [Vibrionales
           bacterium SWAT-3]
          Length = 377

 Score = 36.2 bits (82), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 3/106 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   N L + E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSSDRIDY---NKLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPEV 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKA 159
             ++   +F E +HS ++ +II ++  D G +F+   E   I  +A
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIVNDPGLVFDDIVENEEILKRA 151


>gi|91227184|ref|ZP_01261643.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
           alginolyticus 12G01]
 gi|262393879|ref|YP_003285733.1| ribonucleotide reductase of class Ia (aerobic) subunit beta [Vibrio
           sp. Ex25]
 gi|269967067|ref|ZP_06181135.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
           alginolyticus 40B]
 gi|91188712|gb|EAS75000.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
           alginolyticus 12G01]
 gi|262337473|gb|ACY51268.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           sp. Ex25]
 gi|269828326|gb|EEZ82592.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
           alginolyticus 40B]
          Length = 377

 Score = 36.2 bits (82), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 3/123 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   N L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSSDRIDY---NKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
             ++   +F E +HS ++ +II ++  D   +F+   E   I  +A     Y   L   +
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIVNDPAVVFDDIVENEHILKRAKDIAHYYDDLIQAT 165

Query: 174 FHY 176
             Y
Sbjct: 166 NDY 168


>gi|283782686|ref|YP_003373440.1| ribonucleoside-diphosphate reductase, beta subunit [Gardnerella
           vaginalis 409-05]
 gi|283441437|gb|ADB13903.1| ribonucleoside-diphosphate reductase, beta subunit [Gardnerella
           vaginalis 409-05]
          Length = 359

 Score = 36.2 bits (82), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 10/102 (9%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR---NLGFFASSESLVANNIVLAIYRHL 108
           N W+P +VP+ +D+  W+S   LTD ER    R    L    +S++ +     L    H 
Sbjct: 69  NFWLPEKVPLSNDIPSWRS---LTDLERKTTTRVFTGLTLLDTSQATIGE---LCQIEHA 122

Query: 109 SNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
                +      AF +++H+ ++  I ++L   E E+   YR
Sbjct: 123 RTEHEQAIYTNIAFMQSIHARSYSSIFSTLCSSE-EIDEAYR 163


>gi|227504013|ref|ZP_03934062.1| ribonucleoside-diphosphate reductase [Corynebacterium striatum ATCC
           6940]
 gi|227199407|gb|EEI79455.1| ribonucleoside-diphosphate reductase [Corynebacterium striatum ATCC
           6940]
          Length = 329

 Score = 36.2 bits (82), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 3/90 (3%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +DL  WK+   LT+ E+    R        +++      +++     
Sbjct: 37  TGNFWLPEKVPVSNDLQSWKT---LTEHEQQTTMRVFAGLTLLDTIQGTVGAVSLLPDAK 93

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
            P         AF E+VH+ ++  I  +L 
Sbjct: 94  TPHEEAVYTNIAFMESVHAKSYSNIFMTLA 123


>gi|67008229|emb|CAH18519.1| ribonucleoside-dihosphate reductase beta chain [Rhodobacteraceae
           bacterium 198]
          Length = 325

 Score = 36.2 bits (82), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 5/123 (4%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           N W+P +VP+ +D+  W     LT DE+ +  R        +++        + +    P
Sbjct: 34  NFWLPEKVPLSNDIQSWSQ---LTPDEQTLTIRVFTGLTLLDTIQNAVGAPTLMQDAITP 90

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANWALQYTQTL 169
                L   AF EAVH+ ++  + ++L    +  E F    E   + AK+   L    + 
Sbjct: 91  HEESVLSNIAFMEAVHARSYSSVFSTLCQTTEVDEAFRWSAENEHLQAKSRLILDEYNST 150

Query: 170 SSP 172
           +SP
Sbjct: 151 ASP 153


>gi|213864815|ref|ZP_03386934.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. M223]
          Length = 170

 Score = 36.2 bits (82), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 19/97 (19%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF--------FASSESLVANNIV 101
            +N W+P +VP+ +D+  W++ +    +++L I+   G          A + SL+A+ I 
Sbjct: 27  TSNFWLPEKVPLSNDIPAWQTLSAA--EQQLTIRVFTGLTLLDTIQNIAGAPSLMADAI- 83

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
                    P     L   +F EAVH+ ++  I ++L
Sbjct: 84  --------TPHEEAVLSNISFMEAVHARSYSSIFSTL 112


>gi|51247866|pdb|1UZR|A Chain A, Crystal Structure Of The Class Ib Ribonucleotide Reductase
           R2f-2 Subunit From Mycobacterium Tuberculosis
 gi|51247867|pdb|1UZR|B Chain B, Crystal Structure Of The Class Ib Ribonucleotide Reductase
           R2f-2 Subunit From Mycobacterium Tuberculosis
 gi|51247868|pdb|1UZR|C Chain C, Crystal Structure Of The Class Ib Ribonucleotide Reductase
           R2f-2 Subunit From Mycobacterium Tuberculosis
          Length = 296

 Score = 36.2 bits (82), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 24/107 (22%), Positives = 47/107 (43%), Gaps = 6/107 (5%)

Query: 32  NQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFAS 91
           N+L   K    W++      N W+P +VP+ +D+  W +   LT  E+ +  R       
Sbjct: 17  NRLQDEKDAEVWDRL---TGNFWLPEKVPVSNDIPSWGT---LTAGEKQLTMRVFTGLTM 70

Query: 92  SESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            +++      +++      P     L   AF E+VH+ ++  I ++L
Sbjct: 71  LDTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTL 117


>gi|227505793|ref|ZP_03935842.1| ribonucleoside-diphosphate reductase [Corynebacterium striatum ATCC
           6940]
 gi|227197639|gb|EEI77687.1| ribonucleoside-diphosphate reductase [Corynebacterium striatum ATCC
           6940]
          Length = 318

 Score = 36.2 bits (82), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 3/89 (3%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P ++P+ +DL  W   N    +E+    R      + ++L      +++     
Sbjct: 26  TGNFWLPEKIPVSNDLPKWGLMNA---EEQWATMRVFAGLTALDTLQGAVGAISLMPDAV 82

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            P     L   AF EAVH+ ++  I  +L
Sbjct: 83  TPHEEAVLCNIAFMEAVHAKSYSNIFMTL 111


>gi|196040724|ref|ZP_03108023.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           NVH0597-99]
 gi|196028514|gb|EDX67122.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           NVH0597-99]
          Length = 193

 Score = 36.2 bits (82), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 5/118 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W   E+ +  D   W     L+ +E++  KR LG     ++      +  +  HL N + 
Sbjct: 26  WTEEEIAVSSDKNTWVQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLVLVHLENLQA 82

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTL 169
           +  L      E VH+ ++ +I T+L  +E   E+F+     P +  KA     Y + L
Sbjct: 83  KSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDEIFDWVDTHPLLEKKAGIITSYYRRL 140


>gi|221231890|ref|YP_002511042.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus pneumoniae ATCC 700669]
 gi|220674350|emb|CAR68896.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus pneumoniae ATCC 700669]
          Length = 320

 Score = 36.2 bits (82), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            A+   +  P          F E+VH+ ++  I ++L
Sbjct: 75  QALREDIRTPHEEAVFNNIQFMESVHAKSYSSIFSTL 111


>gi|24379140|ref|NP_721095.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           mutans UA159]
 gi|290580850|ref|YP_003485242.1| putative ribonucleotide reductase small subunit [Streptococcus
           mutans NN2025]
 gi|24377045|gb|AAN58401.1|AE014910_5 putative ribonucleotide reductase, small subunit [Streptococcus
           mutans UA159]
 gi|254997749|dbj|BAH88350.1| putative ribonucleotide reductase small subunit [Streptococcus
           mutans NN2025]
          Length = 319

 Score = 36.2 bits (82), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L+  E+ ++ +  G     +++ + + V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSAAEKDLVGKVFGGLTLLDTMQSQSGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            AI   +  P     L    F E+VH+ ++  I ++L
Sbjct: 75  EAIRGDVRTPHEEAVLNNIQFMESVHAKSYSSIFSTL 111


>gi|237729635|ref|ZP_04560116.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter sp.
           30_2]
 gi|226908241|gb|EEH94159.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter sp.
           30_2]
          Length = 319

 Score = 36.2 bits (82), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 19/97 (19%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF--------FASSESLVANNIV 101
            +N W+P +VP+ +D+  W++ N    +++L I+   G          A + +L+A+++ 
Sbjct: 27  TSNFWLPEKVPLSNDIPAWQTLNAA--EQQLTIRVFTGLTLLDTIQNVAGAPALMADSLT 84

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
                    P     L   +F EAVH+ ++  I ++L
Sbjct: 85  ---------PHEEAVLSNISFMEAVHARSYSSIFSTL 112


>gi|229177859|ref|ZP_04305232.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           172560W]
 gi|228605650|gb|EEK63098.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           172560W]
          Length = 322

 Score = 36.2 bits (82), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 28/122 (22%), Positives = 50/122 (40%), Gaps = 5/122 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W   E+ +  D   W     L+ +E++  KR LG     ++      +  +  HL N + 
Sbjct: 26  WTEEEIAVSSDKNTWAQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLVLVHLENLQA 82

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSS 171
           +  L      E VH+ ++ +I T+L  +E   ++F      P +  KA     Y + L  
Sbjct: 83  KSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFEWVDTHPLLEKKAGIITGYYRRLLK 142

Query: 172 PS 173
           P 
Sbjct: 143 PE 144


>gi|213966196|ref|ZP_03394381.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           amycolatum SK46]
 gi|213951131|gb|EEB62528.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           amycolatum SK46]
          Length = 334

 Score = 35.8 bits (81), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 14/112 (12%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           N W+P +VP+ +DLA W+    LTD ER +  +        +++ A+   ++  +     
Sbjct: 44  NFWLPEKVPLSNDLADWRR---LTDLERELTMKVFTGLTMLDTVQASVGEISQIQDARTE 100

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWAL 163
                    AF +AVH+ ++  + ++L              P I A   WA+
Sbjct: 101 HEEAVYTNIAFMQAVHAKSYSSVFSTLS-----------NTPDIDAAYQWAV 141


>gi|312885176|ref|ZP_07744856.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309367189|gb|EFP94761.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 377

 Score = 35.8 bits (81), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 3/116 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   N L + E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSSDRIDF---NKLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPEV 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
             ++   +F E +HS ++ +II ++  D G +F+   E   I  +A     Y   L
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIVNDPGLVFDDIVENEHILKRAEDISHYYDDL 161


>gi|258622932|ref|ZP_05717948.1| Ribonucleoside-diphosphate reductase subunit beta [Vibrio mimicus
           VM573]
 gi|258624605|ref|ZP_05719543.1| Ribonucleoside-diphosphate reductase subunit beta [Vibrio mimicus
           VM603]
 gi|262165762|ref|ZP_06033499.1| ribonucleotide reductase of class Ib (aerobic) beta subunit [Vibrio
           mimicus VM223]
 gi|262171415|ref|ZP_06039093.1| ribonucleotide reductase of class Ib (aerobic) beta subunit [Vibrio
           mimicus MB-451]
 gi|258583152|gb|EEW07963.1| Ribonucleoside-diphosphate reductase subunit beta [Vibrio mimicus
           VM603]
 gi|258584871|gb|EEW09604.1| Ribonucleoside-diphosphate reductase subunit beta [Vibrio mimicus
           VM573]
 gi|261892491|gb|EEY38477.1| ribonucleotide reductase of class Ib (aerobic) beta subunit [Vibrio
           mimicus MB-451]
 gi|262025478|gb|EEY44146.1| ribonucleotide reductase of class Ib (aerobic) beta subunit [Vibrio
           mimicus VM223]
          Length = 323

 Score = 35.8 bits (81), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 10/143 (6%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           N W+P +VP+ +DL+ W     LT+ E+ +  R        +++  +    A+       
Sbjct: 32  NFWLPEKVPLSNDLSTW---GLLTEQEQTLTIRVFTGLTLLDTIQNSVGAPALMVDAVTQ 88

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTL 169
                L   AF EAVH+ ++  + ++L   +   E F    E P +  KA   L   Q  
Sbjct: 89  HEEAVLTNIAFMEAVHARSYSSVFSTLCTTKQIDEAFRWSEENPHLQRKAQLILHEYQAG 148

Query: 170 SSPSFHYWNKRRRSRILTRSLRF 192
             P      K++ + +   S  F
Sbjct: 149 ECPL-----KKKIASVFLESFLF 166


>gi|146284237|ref|YP_001174390.1| transcriptional regulator [Pseudomonas stutzeri A1501]
 gi|145572442|gb|ABP81548.1| probable transcriptional regulator [Pseudomonas stutzeri A1501]
          Length = 333

 Score = 35.8 bits (81), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 9/68 (13%)

Query: 23  RMLNARSD--VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           R++NA     V +L      WA E    AC + W+  E   QDDLA W    GLT  E L
Sbjct: 254 RLVNAGGSLLVTELCSHNQSWARE----ACGDLWLGFE---QDDLARWADAAGLTPGESL 306

Query: 81  MIKRNLGF 88
            I    GF
Sbjct: 307 YIGLKNGF 314


>gi|284504289|ref|YP_003407004.1| ribonucleotide reductase small chain [Marseillevirus]
 gi|282935727|gb|ADB04042.1| ribonucleotide reductase small chain [Marseillevirus]
          Length = 280

 Score = 35.8 bits (81), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 5/94 (5%)

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSN--PECRQYLLRQAFEEAVHSHTF 131
           LT  E+  +K  L FFA  + +V  N+V    + +S+   E   + + QA  E +H+ T+
Sbjct: 7   LTKGEKKFVKLELAFFAQFDGIVVENLVRNFQQEVSSYAKEIEWFYILQAANELIHNETY 66

Query: 132 QYIITSL---GLDEGELFNMYREVPSITAKANWA 162
             +I +L        +  +     PSI   ANW 
Sbjct: 67  MNLIDNLLPSPKKREKALDAISNYPSIRLIANWV 100


>gi|315641368|ref|ZP_07896443.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           italicus DSM 15952]
 gi|315482861|gb|EFU73382.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           italicus DSM 15952]
          Length = 321

 Score = 35.8 bits (81), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 8/120 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L++ E+ ++    G     ++L + + +
Sbjct: 22  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSEPEKQLVGHVFGGLTLLDTLQSESGI 75

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKA 159
             + +    P     L    F E+VH+ ++  I ++L   +   E+F      P + AKA
Sbjct: 76  DQLRKDARTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKKEIEEIFEWTNTNPYLQAKA 135


>gi|302661364|ref|XP_003022351.1| pentatricopeptide repeat protein [Trichophyton verrucosum HKI 0517]
 gi|291186291|gb|EFE41733.1| pentatricopeptide repeat protein [Trichophyton verrucosum HKI 0517]
          Length = 646

 Score = 35.8 bits (81), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 60/134 (44%), Gaps = 32/134 (23%)

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLL---- 118
           DDL   ++K+  T++ +L+    LG    +E   +  +V      LSNP+ R+ L+    
Sbjct: 90  DDLTYNRAKHANTEESKLLFGLYLGVLGKAEGTTSLKVV------LSNPQ-REVLVPSRP 142

Query: 119 -RQAFEEAVHSHTFQYIITSLGLD---EGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
            +QA  + + ++   ++I+ L  +   + ELF  YR +P                 SP  
Sbjct: 143 CKQAGNDDLDANGVSHLISLLNQEDCGDQELFAAYRRIP-----------------SPGV 185

Query: 175 HYWNKRRRSRILTR 188
            Y + + R ++L R
Sbjct: 186 SYLSSKTRGKLLHR 199


>gi|302500176|ref|XP_003012082.1| pentatricopeptide repeat protein [Arthroderma benhamiae CBS 112371]
 gi|291175638|gb|EFE31442.1| pentatricopeptide repeat protein [Arthroderma benhamiae CBS 112371]
          Length = 646

 Score = 35.8 bits (81), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 60/134 (44%), Gaps = 32/134 (23%)

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLL---- 118
           DDL   ++K+  T++ +L+    LG    +E   +  +V      LSNP+ R+ L+    
Sbjct: 90  DDLTYNRAKHANTEESKLLFGLYLGVLGKAEGTTSLKVV------LSNPQ-REVLVPSRP 142

Query: 119 -RQAFEEAVHSHTFQYIITSLGLD---EGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
            +QA  + + ++   ++I+ L  +   + ELF  YR +P                 SP  
Sbjct: 143 CKQAGNDDLDANGVSHLISLLNQEDCGDQELFAAYRRIP-----------------SPGV 185

Query: 175 HYWNKRRRSRILTR 188
            Y + + R ++L R
Sbjct: 186 SYLSSKTRGKLLHR 199


>gi|37526941|ref|NP_930285.1| ribonucleotide-diphosphate reductase subunit beta [Photorhabdus
           luminescens subsp. laumondii TTO1]
 gi|36786374|emb|CAE15427.1| ribonucleoside-diphosphate reductase 1 beta chain (ribonucleotide
           reductase 1) (B2 protein) (R2 protein) [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 376

 Score = 35.8 bits (81), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 61/145 (42%), Gaps = 8/145 (5%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   N L D E+ +   NL +    +S+   +  +A    +S PE 
Sbjct: 49  WRPEEVDVSRDRIDY---NALPDHEKHIFISNLKYQTLLDSIQGRSPNVAFLPLISIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
             ++   +F E +HS ++ +II ++  D   +F+       I  +A     Y   L   +
Sbjct: 106 ETWVETWSFSETIHSRSYTHIIRNIVNDPAVVFDDIVTNEEILKRAKDISAYYDDLIEMT 165

Query: 174 FHY-----WNKRRRSRILTRSLRFL 193
            HY        +   + +T SLR L
Sbjct: 166 NHYQLFGEGTHQIAGKTITASLRGL 190


>gi|212712928|ref|ZP_03321056.1| hypothetical protein PROVALCAL_04026 [Providencia alcalifaciens DSM
           30120]
 gi|212684406|gb|EEB43934.1| hypothetical protein PROVALCAL_04026 [Providencia alcalifaciens DSM
           30120]
          Length = 323

 Score = 35.8 bits (81), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 28/119 (23%), Positives = 53/119 (44%), Gaps = 7/119 (5%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNI-VLAIYRHL 108
            +N W+P ++P+ +D   W +    TD+++L I+   G   +    + N +    +    
Sbjct: 31  TSNFWLPEKIPLSNDTVSWNTLK--TDEQQLTIRVFTGL--TLLDTIQNTVGAPCLMEDA 86

Query: 109 SNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANWALQY 165
             P     L   +F EAVH+ ++  I ++L   +D  E +    E  ++  KA   L Y
Sbjct: 87  QTPHEEAVLSNISFMEAVHARSYSSIFSTLCSTVDVDEAYRWSEENTALQNKAKIILSY 145


>gi|328474726|gb|EGF45531.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           parahaemolyticus 10329]
          Length = 377

 Score = 35.8 bits (81), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 3/116 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   N L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSSDRIDY---NKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
             ++   +F E +HS ++ +II ++  D   +F+   E   I  +A     Y   L
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEHILKRAKDIAHYYDDL 161


>gi|28898709|ref|NP_798314.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|153839553|ref|ZP_01992220.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus AQ3810]
 gi|260363692|ref|ZP_05776476.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus K5030]
 gi|260879741|ref|ZP_05892096.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus AN-5034]
 gi|260898785|ref|ZP_05907226.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus Peru-466]
 gi|260901598|ref|ZP_05909993.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus AQ4037]
 gi|28806927|dbj|BAC60198.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|149746934|gb|EDM57922.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus AQ3810]
 gi|308086689|gb|EFO36384.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus Peru-466]
 gi|308093260|gb|EFO42955.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus AN-5034]
 gi|308108691|gb|EFO46231.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus AQ4037]
 gi|308113401|gb|EFO50941.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus K5030]
          Length = 377

 Score = 35.8 bits (81), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 3/116 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   N L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSSDRIDY---NKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
             ++   +F E +HS ++ +II ++  D   +F+   E   I  +A     Y   L
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEHILKRAKDIAHYYDDL 161


>gi|289167885|ref|YP_003446154.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           mitis B6]
 gi|288907452|emb|CBJ22289.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           mitis B6]
          Length = 321

 Score = 35.8 bits (81), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V
Sbjct: 22  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGV 75

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            A+   +  P          F E+VH+ ++  I ++L
Sbjct: 76  QALRSDIRTPHEEAVFNNIQFMESVHAKSYSSIFSTL 112


>gi|42780545|ref|NP_977792.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus
           ATCC 10987]
 gi|42736465|gb|AAS40400.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           ATCC 10987]
          Length = 322

 Score = 35.8 bits (81), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 50/121 (41%), Gaps = 5/121 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W   E+ +  D   W     L+ +E++  KR LG     ++      +  +  HL N + 
Sbjct: 26  WTEEEIAVSSDKNTWVQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLVLVHLENLQA 82

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSS 171
           +  L      E VH+ ++ +I T+L  +E   ++F      P +  KA     Y + L  
Sbjct: 83  KSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFEWVDNHPLLEKKAGIITSYYRRLLK 142

Query: 172 P 172
           P
Sbjct: 143 P 143


>gi|16766119|ref|NP_461734.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|167992529|ref|ZP_02573627.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|168233769|ref|ZP_02658827.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|194469894|ref|ZP_03075878.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|197251114|ref|YP_002147708.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|204929699|ref|ZP_03220773.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|238909579|ref|ZP_04653416.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Tennessee str.
           CDC07-0191]
 gi|585861|sp|P17424|RIR4_SALTY RecName: Full=Ribonucleoside-diphosphate reductase 2 subunit beta;
           AltName: Full=R2F protein; AltName: Full=Ribonucleotide
           reductase 2
 gi|4389108|pdb|2R2F|A Chain A, Ribonucleotide Reductase R2f Protein From Salmonella
           Typhimurium (Oxidized)
 gi|4389109|pdb|2R2F|B Chain B, Ribonucleotide Reductase R2f Protein From Salmonella
           Typhimurium (Oxidized)
 gi|4389155|pdb|1R2F|A Chain A, Ribonucleotide Reductase R2f Protein From Salmonella
           Typhimurium
 gi|4389156|pdb|1R2F|B Chain B, Ribonucleotide Reductase R2f Protein From Salmonella
           Typhimurium
 gi|109157246|pdb|2BQ1|I Chain I, Ribonucleotide Reductase Class 1b Holocomplex R1e,R2f From
           Salmonella Typhimurium
 gi|109157247|pdb|2BQ1|J Chain J, Ribonucleotide Reductase Class 1b Holocomplex R1e,R2f From
           Salmonella Typhimurium
 gi|311979|emb|CAA51695.1| ribonucleoside-diphosphate reductase [Salmonella enterica subsp.
           enterica serovar Typhimurium]
 gi|16421357|gb|AAL21693.1| ribonucleoside-diphosphate reductase 2, beta subunit [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|194456258|gb|EDX45097.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|197214817|gb|ACH52214.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|204321418|gb|EDZ06618.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|205329263|gb|EDZ16027.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|205332191|gb|EDZ18955.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|261247949|emb|CBG25782.1| ribonucleoside-diphosphate reductase 2 beta chain [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267994924|gb|ACY89809.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           14028S]
 gi|301159373|emb|CBW18891.1| ribonucleoside-diphosphate reductase 2 beta chain [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           SL1344]
 gi|312913831|dbj|BAJ37805.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           T000240]
 gi|321223605|gb|EFX48670.1| Ribonucleotide reductase of class Ib aerobic, beta subunit
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. TN061786]
 gi|323131164|gb|ADX18594.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str. 4/74]
          Length = 319

 Score = 35.8 bits (81), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 19/97 (19%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF--------FASSESLVANNIV 101
            +N W+P +VP+ +D+  W++ +    +++L I+   G          A + SL+A+ I 
Sbjct: 27  TSNFWLPEKVPLSNDIPAWQTLSAA--EQQLTIRVFTGLTLLDTIQNIAGAPSLMADAIT 84

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
                    P     L   +F EAVH+ ++  I ++L
Sbjct: 85  ---------PHEEAVLSNISFMEAVHARSYSSIFSTL 112


>gi|322692090|ref|YP_004221660.1| ribonucleotide-diphosphate reductase beta subunit [Bifidobacterium
           longum subsp. longum JCM 1217]
 gi|320456946|dbj|BAJ67568.1| ribonucleotide-diphosphate reductase beta subunit [Bifidobacterium
           longum subsp. longum JCM 1217]
          Length = 330

 Score = 35.8 bits (81), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 19/89 (21%), Positives = 40/89 (44%), Gaps = 3/89 (3%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  W+    +T+DE  +  R        +++      +++     
Sbjct: 38  TGNFWLPEKVPVSNDIPSWQK---MTEDEHTLTMRVFTGLTLLDTIQGTVGAVSLIPDAL 94

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            P         AF E+VH+ ++  I ++L
Sbjct: 95  TPHEEAVYTNIAFMESVHAKSYSSIFSTL 123


>gi|168238723|ref|ZP_02663781.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|194737146|ref|YP_002115764.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|194712648|gb|ACF91869.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|197288484|gb|EDY27861.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
          Length = 319

 Score = 35.8 bits (81), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 19/97 (19%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF--------FASSESLVANNIV 101
            +N W+P +VP+ +D+  W++ +    +++L I+   G          A + SL+A+ I 
Sbjct: 27  TSNFWLPEKVPLSNDIPAWQTLSAA--EQQLTIRVFTGLTLLDTIQNIAGAPSLMADAIT 84

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
                    P     L   +F EAVH+ ++  I ++L
Sbjct: 85  ---------PHEEAVLSNISFMEAVHARSYSSIFSTL 112


>gi|306819415|ref|ZP_07453122.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           mulieris ATCC 35239]
 gi|307701705|ref|ZP_07638721.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus
           mulieris FB024-16]
 gi|304647707|gb|EFM45025.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           mulieris ATCC 35239]
 gi|307613208|gb|EFN92461.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus
           mulieris FB024-16]
          Length = 333

 Score = 35.8 bits (81), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 20/117 (17%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR---NLGFFASSESLVANNIVLAIYR 106
            +N W+P +VP+ +DL  W   N L+D ER +  R    L    + ++ V    +  I  
Sbjct: 42  TSNFWLPEKVPLSNDLPSW---NQLSDMERSVTMRVFTGLTMLDTVQATVGE--ISQIQD 96

Query: 107 HLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWAL 163
            ++  E   Y    AF +AVH+ ++  I ++L              P I A   WA+
Sbjct: 97  GITEHEQAIY-ANIAFMQAVHARSYSSIFSTLS-----------NTPEIDAAYTWAV 141


>gi|293365329|ref|ZP_06612046.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           oralis ATCC 35037]
 gi|306825287|ref|ZP_07458629.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sp. oral taxon 071 str. 73H25AP]
 gi|307703869|ref|ZP_07640810.1| ribonucleoside-diphosphate reductase 2, subunit beta [Streptococcus
           oralis ATCC 35037]
 gi|315613100|ref|ZP_07888010.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis ATCC 49296]
 gi|291316779|gb|EFE57215.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           oralis ATCC 35037]
 gi|304432723|gb|EFM35697.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sp. oral taxon 071 str. 73H25AP]
 gi|307622704|gb|EFO01700.1| ribonucleoside-diphosphate reductase 2, subunit beta [Streptococcus
           oralis ATCC 35037]
 gi|315314662|gb|EFU62704.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis ATCC 49296]
          Length = 320

 Score = 35.8 bits (81), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            A+   +  P          F E+VH+ ++  I ++L
Sbjct: 75  QALRSDIRTPHEEAVFNNIQFMESVHAKSYSSIFSTL 111


>gi|269963956|ref|ZP_06178265.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio harveyi
           1DA3]
 gi|269831299|gb|EEZ85449.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio harveyi
           1DA3]
          Length = 377

 Score = 35.8 bits (81), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 3/123 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   N L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSSDRIDY---NKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
             ++   +F E +HS ++ +II ++  D   +F+   E   I  +A     Y   L   +
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEHILKRAKDIAHYYDDLIQAT 165

Query: 174 FHY 176
             Y
Sbjct: 166 NDY 168


>gi|213419183|ref|ZP_03352249.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
          Length = 305

 Score = 35.8 bits (81), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 19/96 (19%)

Query: 51  NNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF--------FASSESLVANNIVL 102
           +N W+P +VP+ +D+  W++ +    +++L I+   G          A + SL+A+ I  
Sbjct: 28  SNFWLPEKVPLSNDIPAWQTLSA--AEQQLTIRVFTGLTLLDTIQNIAGAPSLMADAI-- 83

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
                   P     L   +F EAVH+ ++  I ++L
Sbjct: 84  -------TPHEEAVLSNISFMEAVHARSYSSIFSTL 112


>gi|331266449|ref|YP_004326079.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           oralis Uo5]
 gi|326683121|emb|CBZ00739.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           oralis Uo5]
          Length = 320

 Score = 35.8 bits (81), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            A+   +  P          F E+VH+ ++  I ++L
Sbjct: 75  QALRSDIRTPHEEAVFNNIQFMESVHAKSYSSIFSTL 111


>gi|300859086|ref|YP_003784069.1| ribonucleoside-diphosphate reductase subunit beta [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300686540|gb|ADK29462.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302206792|gb|ADL11134.1| Ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           pseudotuberculosis C231]
 gi|302331346|gb|ADL21540.1| Ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           pseudotuberculosis 1002]
 gi|308277038|gb|ADO26937.1| Ribonucleotide reductase, beta subunit [Corynebacterium
           pseudotuberculosis I19]
          Length = 328

 Score = 35.8 bits (81), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 11/145 (7%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +DL  W + N L     + +   L    + +  V     +++     
Sbjct: 36  TGNFWLPEKVPVSNDLKSWGTLNDLEKTTTMRVFTGLTMLDTIQGTVG---AVSMIPDAI 92

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQ 167
            P         AF E+VH+ ++  I  +L   +   E F    E  ++  KA   L Y +
Sbjct: 93  TPHEEAVYTNIAFMESVHAKSYSNIFMTLASTKEINEAFRWSEENENLQKKAKIVLSYYE 152

Query: 168 TLSSPSFHYWNKRRRSRILTRSLRF 192
             + P      KR+ +  L  S  F
Sbjct: 153 G-ADPL-----KRKVASTLLESFLF 171


>gi|293374706|ref|ZP_06621014.1| ribonucleoside-diphosphate reductase, beta subunit [Turicibacter
           sanguinis PC909]
 gi|325840602|ref|ZP_08167083.1| ribonucleoside-diphosphate reductase, beta subunit [Turicibacter
           sp. HGF1]
 gi|292646620|gb|EFF64622.1| ribonucleoside-diphosphate reductase, beta subunit [Turicibacter
           sanguinis PC909]
 gi|325490251|gb|EGC92584.1| ribonucleoside-diphosphate reductase, beta subunit [Turicibacter
           sp. HGF1]
          Length = 321

 Score = 35.8 bits (81), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 6/117 (5%)

Query: 46  YLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIY 105
           YL      W+P E+P+ +D ++W +   L ++ +L  +R LG     ++  +  I   I 
Sbjct: 22  YLKQTEQFWLPEEIPVSEDKSIWDT---LDENIKLTYERILGGLTLLDTEQSTGIQ-KIA 77

Query: 106 RHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
               N   +  L   A  E++H+ ++  I  +L   E   ELFN   E   +  K +
Sbjct: 78  EKSDNLFIKSILALFAGFESIHARSYSTIFQTLCTTERIEELFNWVEETKPLQEKVD 134


>gi|168244605|ref|ZP_02669537.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|168464072|ref|ZP_02697989.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|194442875|ref|YP_002042053.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194450827|ref|YP_002046771.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194401538|gb|ACF61760.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194409131|gb|ACF69350.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|195633109|gb|EDX51523.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|205336532|gb|EDZ23296.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
          Length = 319

 Score = 35.8 bits (81), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 19/97 (19%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF--------FASSESLVANNIV 101
            +N W+P +VP+ +D+  W++ +    +++L I+   G          A + SL+A+ I 
Sbjct: 27  TSNFWLPEKVPLSNDIPAWQTLSAA--EQQLTIRVFTGLTLLDTIQNIAGAPSLMADAIT 84

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
                    P     L   +F EAVH+ ++  I ++L
Sbjct: 85  ---------PHEEAVLSNISFMEAVHARSYSSIFSTL 112


>gi|163803511|ref|ZP_02197381.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp. AND4]
 gi|159172687|gb|EDP57538.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp. AND4]
          Length = 377

 Score = 35.8 bits (81), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 3/123 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   N L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSSDRIDY---NKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPIVSLPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
             ++   +F E +HS ++ +II ++  D   +F+   E   I  +A     Y   L   +
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEHILKRAKDIAHYYDDLIQAT 165

Query: 174 FHY 176
             Y
Sbjct: 166 NDY 168


>gi|77410697|ref|ZP_00787056.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae CJB111]
 gi|77163233|gb|EAO74185.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae CJB111]
          Length = 319

 Score = 35.8 bits (81), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L+  E+ ++ +  G     +++ +   +
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSAQEKDLVGKVFGGLTLLDTMQSETGI 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            AI   +  P     L    F E+VH+ ++  I ++L
Sbjct: 75  EAIRADVRTPHEEAVLNNIQFMESVHAKSYSSIFSTL 111


>gi|306829459|ref|ZP_07462649.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           mitis ATCC 6249]
 gi|304428545|gb|EFM31635.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           mitis ATCC 6249]
          Length = 320

 Score = 35.8 bits (81), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            A+   +  P          F E+VH+ ++  I ++L
Sbjct: 75  QALRSDIRTPHEEAVFNNIQFMESVHAKSYSSIFSTL 111


>gi|269976951|ref|ZP_06183925.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus
           mulieris 28-1]
 gi|269934782|gb|EEZ91342.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus
           mulieris 28-1]
          Length = 333

 Score = 35.8 bits (81), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 20/117 (17%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR---NLGFFASSESLVANNIVLAIYR 106
            +N W+P +VP+ +DL  W   N L+D ER +  R    L    + ++ V    +  I  
Sbjct: 42  TSNFWLPEKVPLSNDLPSW---NQLSDMERSVTMRVFTGLTMLDTVQATVGE--ISQIQD 96

Query: 107 HLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWAL 163
            ++  E   Y    AF +AVH+ ++  I ++L              P I A   WA+
Sbjct: 97  GITEHEQAIY-ANIAFMQAVHARSYSSIFSTLS-----------NTPEIDAAYTWAV 141


>gi|253990649|ref|YP_003042005.1| ribonucleotide-diphosphate reductase subunit beta [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253782099|emb|CAQ85263.1| ribonucleoside-diphosphate reductase 2 beta chain [Photorhabdus
           asymbiotica]
          Length = 319

 Score = 35.8 bits (81), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 3/89 (3%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           N W+P +VP+ +D+  W   N LT +E+ +  R        +++       A+      P
Sbjct: 29  NFWLPEKVPLSNDIPSW---NTLTAEEKKLTIRVFTGLTLLDTIQNTVGAPALMEDALTP 85

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
                +   +F EAVH+ ++  I ++L L
Sbjct: 86  HEEAVMSNISFMEAVHARSYSSIFSTLCL 114


>gi|27366311|ref|NP_761839.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           vulnificus CMCP6]
 gi|37679427|ref|NP_934036.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           vulnificus YJ016]
 gi|320156821|ref|YP_004189200.1| ribonucleotide reductase of class Ia (aerobic), subunit beta
           [Vibrio vulnificus MO6-24/O]
 gi|27362512|gb|AAO11366.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Vibrio vulnificus CMCP6]
 gi|37198171|dbj|BAC94007.1| ribonucleotide reductase, beta subunit [Vibrio vulnificus YJ016]
 gi|319932133|gb|ADV86997.1| ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Vibrio vulnificus MO6-24/O]
          Length = 377

 Score = 35.8 bits (81), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 3/116 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   N L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSSDRIDY---NKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
             ++   +F E +HS ++ +II ++  D   +F+   E   I  +A     Y   L
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEHILKRAKDIAHYYDDL 161


>gi|227494314|ref|ZP_03924630.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces
           coleocanis DSM 15436]
 gi|226832048|gb|EEH64431.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces
           coleocanis DSM 15436]
          Length = 322

 Score = 35.8 bits (81), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 20/89 (22%), Positives = 40/89 (44%), Gaps = 3/89 (3%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P ++P+ +D+  W   N L  +E+ M  +        ++L      +++     
Sbjct: 30  TGNFWLPEKIPLSNDIPSW---NTLRPEEQDMTNKVFTNLTLLDTLQGTVGAISLISDAR 86

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            P     L   AF E+VH+ ++  I ++L
Sbjct: 87  TPHEEAVLTNIAFMESVHARSYSSIFSTL 115


>gi|239622882|ref|ZP_04665913.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Bifidobacterium longum subsp. infantis CCUG 52486]
 gi|312133660|ref|YP_004000999.1| nrdf [Bifidobacterium longum subsp. longum BBMN68]
 gi|317482331|ref|ZP_07941351.1| ribonucleotide reductase [Bifidobacterium sp. 12_1_47BFAA]
 gi|322690138|ref|YP_004209872.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           longum subsp. infantis 157F]
 gi|239514879|gb|EEQ54746.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Bifidobacterium longum subsp. infantis CCUG 52486]
 gi|291517762|emb|CBK71378.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Bifidobacterium longum subsp. longum F8]
 gi|311772922|gb|ADQ02410.1| NrdF [Bifidobacterium longum subsp. longum BBMN68]
 gi|316916211|gb|EFV37613.1| ribonucleotide reductase [Bifidobacterium sp. 12_1_47BFAA]
 gi|320461474|dbj|BAJ72094.1| ribonucleotide-diphosphate reductase beta subunit [Bifidobacterium
           longum subsp. infantis 157F]
          Length = 330

 Score = 35.8 bits (81), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 19/89 (21%), Positives = 40/89 (44%), Gaps = 3/89 (3%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  W+    +T+DE  +  R        +++      +++     
Sbjct: 38  TGNFWLPEKVPVSNDIPSWQK---MTEDEHTLTMRVFTGLTLLDTIQGTVGAVSLIPDAL 94

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            P         AF E+VH+ ++  I ++L
Sbjct: 95  TPHEEAVYTNIAFMESVHAKSYSSIFSTL 123


>gi|213693323|ref|YP_002323909.1| Ribonucleoside-diphosphate reductase [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|213524784|gb|ACJ53531.1| Ribonucleoside-diphosphate reductase [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|320459505|dbj|BAJ70126.1| ribonucleotide-diphosphate reductase beta subunit [Bifidobacterium
           longum subsp. infantis ATCC 15697]
          Length = 330

 Score = 35.8 bits (81), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 19/89 (21%), Positives = 40/89 (44%), Gaps = 3/89 (3%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  W+    +T+DE  +  R        +++      +++     
Sbjct: 38  TGNFWLPEKVPVSNDIPSWQK---MTEDEHTLTMRVFTGLTLLDTIQGTVGAVSLIPDAL 94

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            P         AF E+VH+ ++  I ++L
Sbjct: 95  TPHEEAVYTNIAFMESVHAKSYSSIFSTL 123


>gi|198241755|ref|YP_002216784.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|197936271|gb|ACH73604.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|326624542|gb|EGE30887.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Dublin str. 3246]
          Length = 319

 Score = 35.8 bits (81), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 19/96 (19%)

Query: 51  NNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF--------FASSESLVANNIVL 102
           +N W+P +VP+ +D+  W++ +    +++L I+   G          A + SL+A+ I  
Sbjct: 28  SNFWLPEKVPLSNDIPAWQTLSAA--EQQLTIRVFTGLTLLDTIQNIAGAPSLMADAIT- 84

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
                   P     L   +F EAVH+ ++  I ++L
Sbjct: 85  --------PHEEAVLSNISFMEAVHARSYSSIFSTL 112


>gi|296455120|ref|YP_003662264.1| ribonucleoside-diphosphate reductase [Bifidobacterium longum subsp.
           longum JDM301]
 gi|296184552|gb|ADH01434.1| Ribonucleoside-diphosphate reductase [Bifidobacterium longum subsp.
           longum JDM301]
          Length = 330

 Score = 35.8 bits (81), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 19/89 (21%), Positives = 40/89 (44%), Gaps = 3/89 (3%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  W+    +T+DE  +  R        +++      +++     
Sbjct: 38  TGNFWLPEKVPVSNDIPSWQK---MTEDEHTLTMRVFTGLTLLDTIQGTVGAVSLIPDAL 94

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            P         AF E+VH+ ++  I ++L
Sbjct: 95  TPHEEAVYTNIAFMESVHAKSYSSIFSTL 123


>gi|168262084|ref|ZP_02684057.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|205349275|gb|EDZ35906.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
          Length = 319

 Score = 35.8 bits (81), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 19/96 (19%)

Query: 51  NNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF--------FASSESLVANNIVL 102
           +N W+P +VP+ +D+  W++ +    +++L I+   G          A + SL+A+ I  
Sbjct: 28  SNFWLPEKVPLSNDIPAWQTLSAA--EQQLTIRVFTGLTLLDTIQNIAGAPSLMADAIT- 84

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
                   P     L   +F EAVH+ ++  I ++L
Sbjct: 85  --------PHEEAVLSNISFMEAVHARSYSSIFSTL 112


>gi|16761590|ref|NP_457207.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. CT18]
 gi|29143070|ref|NP_806412.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|213052490|ref|ZP_03345368.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213424576|ref|ZP_03357365.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E02-1180]
 gi|213584527|ref|ZP_03366353.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-0664]
 gi|213650063|ref|ZP_03380116.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. J185]
 gi|289824437|ref|ZP_06544026.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
 gi|25330821|pir||AH0841 ribonucleoside-diphosphate reductase (EC 1.17.4.1) - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16503891|emb|CAD05919.1| ribonucleoside-diphosphate reductase 2 beta chain [Salmonella
           enterica subsp. enterica serovar Typhi]
 gi|29138703|gb|AAO70272.1| ribonucleoside-diphosphate reductase 2 beta chain [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
          Length = 319

 Score = 35.8 bits (81), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 19/96 (19%)

Query: 51  NNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF--------FASSESLVANNIVL 102
           +N W+P +VP+ +D+  W++ +    +++L I+   G          A + SL+A+ I  
Sbjct: 28  SNFWLPEKVPLSNDIPAWQTLSAA--EQQLTIRVFTGLTLLDTIQNIAGAPSLMADAIT- 84

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
                   P     L   +F EAVH+ ++  I ++L
Sbjct: 85  --------PHEEAVLSNISFMEAVHARSYSSIFSTL 112


>gi|224584592|ref|YP_002638390.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|224469119|gb|ACN46949.1| ribonucleotide-diphosphate reductase beta subunit [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
          Length = 319

 Score = 35.8 bits (81), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 19/96 (19%)

Query: 51  NNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF--------FASSESLVANNIVL 102
           +N W+P +VP+ +D+  W++ +    +++L I+   G          A + SL+A+ I  
Sbjct: 28  SNFWLPEKVPLSNDIPAWQTLSAA--EQQLTIRVFTGLTLLDTIQNIAGAPSLMADAIT- 84

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
                   P     L   +F EAVH+ ++  I ++L
Sbjct: 85  --------PHEEAVLSNISFMEAVHARSYSSIFSTL 112


>gi|62181312|ref|YP_217729.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|161615703|ref|YP_001589668.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Paratyphi B str. SPB7]
 gi|167552693|ref|ZP_02346445.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|168822877|ref|ZP_02834877.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|197265553|ref|ZP_03165627.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|205353758|ref|YP_002227559.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|207858077|ref|YP_002244728.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|62128945|gb|AAX66648.1| ribonucleoside-diphosphate reductase 2, beta subunit [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|161365067|gb|ABX68835.1| hypothetical protein SPAB_03488 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|197243808|gb|EDY26428.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|205273539|emb|CAR38525.1| ribonucleoside-diphosphate reductase 2 beta chain [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|205322691|gb|EDZ10530.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|205340791|gb|EDZ27555.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|206709880|emb|CAR34233.1| ribonucleoside-diphosphate reductase 2 beta chain [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|320087214|emb|CBY96980.1| ribonucleoside-diphosphate reductase beta chain [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           2007-60-3289-1]
 gi|322715798|gb|EFZ07369.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Choleraesuis str. A50]
 gi|326628866|gb|EGE35209.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 9]
          Length = 319

 Score = 35.8 bits (81), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 19/96 (19%)

Query: 51  NNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF--------FASSESLVANNIVL 102
           +N W+P +VP+ +D+  W++ +    +++L I+   G          A + SL+A+ I  
Sbjct: 28  SNFWLPEKVPLSNDIPAWQTLSAA--EQQLTIRVFTGLTLLDTIQNIAGAPSLMADAIT- 84

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
                   P     L   +F EAVH+ ++  I ++L
Sbjct: 85  --------PHEEAVLSNISFMEAVHARSYSSIFSTL 112


>gi|23465253|ref|NP_695856.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           longum NCC2705]
 gi|23325884|gb|AAN24492.1| ribonucleoside-diphosphate reductase 2 beta chain [Bifidobacterium
           longum NCC2705]
          Length = 330

 Score = 35.8 bits (81), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 19/89 (21%), Positives = 40/89 (44%), Gaps = 3/89 (3%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  W+    +T+DE  +  R        +++      +++     
Sbjct: 38  TGNFWLPEKVPVSNDIPSWQK---MTEDEHTLTMRVFTGLTLLDTIQGTVGAVSLIPDAL 94

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            P         AF E+VH+ ++  I ++L
Sbjct: 95  TPHEEAVYTNIAFMESVHAKSYSSIFSTL 123


>gi|319440691|ref|ZP_07989847.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           variabile DSM 44702]
          Length = 335

 Score = 35.8 bits (81), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 15/95 (15%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
            +N W+P ++P+ +DL  W++   L+DDER +  R          L   + V A    +S
Sbjct: 43  TSNFWLPEKMPLSNDLPDWRA---LSDDERTLTARVF------TGLTLLDTVQATVGEIS 93

Query: 110 N-PECRQ-----YLLRQAFEEAVHSHTFQYIITSL 138
             P+ R           AF +AVH+ ++  + +++
Sbjct: 94  QIPDARTEHEQAVYANIAFMQAVHARSYSSVFSTM 128


>gi|270292678|ref|ZP_06198889.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           sp. M143]
 gi|270278657|gb|EFA24503.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           sp. M143]
          Length = 322

 Score = 35.8 bits (81), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            A+   +  P          F E+VH+ ++  I ++L
Sbjct: 75  QALRSDIRTPHEEAVFNNIQFMESVHAKSYSSIFSTL 111


>gi|156975012|ref|YP_001445919.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio harveyi
           ATCC BAA-1116]
 gi|156526606|gb|ABU71692.1| hypothetical protein VIBHAR_02734 [Vibrio harveyi ATCC BAA-1116]
          Length = 377

 Score = 35.8 bits (81), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 3/123 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   N L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSSDRIDY---NKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
             ++   +F E +HS ++ +II ++  D   +F+   E   I  +A     Y   L   +
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEHILKRAKDIAHYYDDLIQAT 165

Query: 174 FHY 176
             Y
Sbjct: 166 NDY 168


>gi|322614368|gb|EFY11299.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315996572]
 gi|322621567|gb|EFY18420.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-1]
 gi|322624428|gb|EFY21261.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-3]
 gi|322626626|gb|EFY23431.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-4]
 gi|322633514|gb|EFY30256.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-1]
 gi|322638443|gb|EFY35141.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-2]
 gi|322639746|gb|EFY36430.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 531954]
 gi|322643792|gb|EFY40342.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322649478|gb|EFY45912.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           OH_2009072675]
 gi|322655932|gb|EFY52232.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322661327|gb|EFY57552.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 19N]
 gi|322662525|gb|EFY58733.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           81038-01]
 gi|322666899|gb|EFY63074.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MD_MDA09249507]
 gi|322671269|gb|EFY67392.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 414877]
 gi|322677724|gb|EFY73787.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 366867]
 gi|322681449|gb|EFY77479.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 413180]
 gi|322683848|gb|EFY79858.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 446600]
 gi|323193763|gb|EFZ78966.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           609458-1]
 gi|323197449|gb|EFZ82586.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           556150-1]
 gi|323203264|gb|EFZ88293.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 609460]
 gi|323205210|gb|EFZ90185.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           507440-20]
 gi|323212777|gb|EFZ97588.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 556152]
 gi|323218081|gb|EGA02793.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB101509-0077]
 gi|323221656|gb|EGA06069.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB102109-0047]
 gi|323225124|gb|EGA09375.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB110209-0055]
 gi|323230844|gb|EGA14962.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB111609-0052]
 gi|323234805|gb|EGA18891.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009083312]
 gi|323238844|gb|EGA22894.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009085258]
 gi|323241544|gb|EGA25575.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315731156]
 gi|323248309|gb|EGA32245.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2009159199]
 gi|323252925|gb|EGA36759.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008282]
 gi|323256953|gb|EGA40662.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008283]
 gi|323260572|gb|EGA44183.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008284]
 gi|323264370|gb|EGA47876.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008285]
 gi|323269504|gb|EGA52957.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008287]
          Length = 319

 Score = 35.8 bits (81), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 19/96 (19%)

Query: 51  NNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF--------FASSESLVANNIVL 102
           +N W+P +VP+ +D+  W++ +    +++L I+   G          A + SL+A+ I  
Sbjct: 28  SNFWLPEKVPLSNDIPAWQTLSAA--EQQLTIRVFTGLTLLDTIQNIAGAPSLMADAIT- 84

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
                   P     L   +F EAVH+ ++  I ++L
Sbjct: 85  --------PHEEAVLSNISFMEAVHARSYSSIFSTL 112


>gi|322374376|ref|ZP_08048890.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           sp. C300]
 gi|321279876|gb|EFX56915.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           sp. C300]
          Length = 320

 Score = 35.8 bits (81), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            A+   +  P          F E+VH+ ++  I ++L
Sbjct: 75  QALRADIRTPHEEAVFNNIQFMESVHAKSYSSIFSTL 111


>gi|90412217|ref|ZP_01220223.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
           profundum 3TCK]
 gi|90326941|gb|EAS43326.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
           profundum 3TCK]
          Length = 377

 Score = 35.8 bits (81), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 3/123 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   N L + E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSGDRIDY---NNLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPIVSIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
             ++   +F E +HS ++ +II ++  D   +F+   E   I  +A    +Y   L + +
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIVNDPAIVFDDIVENDYIIKRAGDISKYYDDLIAAT 165

Query: 174 FHY 176
             Y
Sbjct: 166 SDY 168


>gi|15675308|ref|NP_269482.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes M1 GAS]
 gi|21910586|ref|NP_664854.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS315]
 gi|28895723|ref|NP_802073.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes SSI-1]
 gi|71910937|ref|YP_282487.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS5005]
 gi|94988801|ref|YP_596902.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS9429]
 gi|94992686|ref|YP_600785.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS2096]
 gi|306826388|ref|ZP_07459706.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes ATCC 10782]
 gi|13622486|gb|AAK34203.1| ribonucleotide diphosphate reductase small subunit [Streptococcus
           pyogenes M1 GAS]
 gi|21904787|gb|AAM79657.1| putative ribonucleoside-diphosphate reductase 2 beta subunit
           [Streptococcus pyogenes MGAS315]
 gi|28810972|dbj|BAC63906.1| putative ribonucleotide diphosphate reductase, small subunit
           [Streptococcus pyogenes SSI-1]
 gi|71853719|gb|AAZ51742.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS5005]
 gi|94542309|gb|ABF32358.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS9429]
 gi|94546194|gb|ABF36241.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS2096]
 gi|304431419|gb|EFM34410.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes ATCC 10782]
          Length = 319

 Score = 35.8 bits (81), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L+  E+ ++ +  G     +++ +   V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSLQEKDLVGKVFGGLTLLDTMQSETGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            AI   +  P     L    F E+VH+ ++  I ++L
Sbjct: 75  EAIRADVRTPHEEAVLNNIQFMESVHAKSYSSIFSTL 111


>gi|228938567|ref|ZP_04101175.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228971446|ref|ZP_04132072.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228978059|ref|ZP_04138438.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis Bt407]
 gi|157955340|gb|ABW06049.1| NrdF [Bacillus thuringiensis serovar thuringiensis]
 gi|157955368|gb|ABW06070.1| NrdF [Bacillus thuringiensis serovar galechiae]
 gi|157955384|gb|ABW06082.1| NrdF [Bacillus thuringiensis serovar sotto]
 gi|228781720|gb|EEM29919.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis Bt407]
 gi|228788313|gb|EEM36266.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228821165|gb|EEM67182.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|326939076|gb|AEA14972.1| ribonucleotide-diphosphate reductase [Bacillus thuringiensis
           serovar chinensis CT-43]
          Length = 322

 Score = 35.8 bits (81), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 28/122 (22%), Positives = 50/122 (40%), Gaps = 5/122 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W   E+ +  D   W     L+ +E++  KR LG     ++      +  +  HL N + 
Sbjct: 26  WTEEEIAVSSDKNTWAQ---LSKEEQVAYKRVLGGLTLLDTKQGGEGMPLVLVHLENLQA 82

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSS 171
           +  L      E VH+ ++ +I T+L  +E   ++F      P +  KA     Y + L  
Sbjct: 83  KSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFEWVDTHPLLEKKAGIITGYYRRLLK 142

Query: 172 PS 173
           P 
Sbjct: 143 PE 144


>gi|94990703|ref|YP_598803.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS10270]
 gi|94544211|gb|ABF34259.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS10270]
          Length = 320

 Score = 35.8 bits (81), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L+  E+ ++ +  G     +++ +   V
Sbjct: 22  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSLQEKDLVGKVFGGLTLLDTMQSETGV 75

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            AI   +  P     L    F E+VH+ ++  I ++L
Sbjct: 76  EAIRADVRTPHEEAVLNNIQFMESVHAKSYSSIFSTL 112


>gi|19746348|ref|NP_607484.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS8232]
 gi|50914444|ref|YP_060416.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS10394]
 gi|71903783|ref|YP_280586.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS6180]
 gi|94994624|ref|YP_602722.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS10750]
 gi|139473584|ref|YP_001128300.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes str. Manfredo]
 gi|19748543|gb|AAL97983.1| ribonucleotide diphosphate reductase small subunit [Streptococcus
           pyogenes MGAS8232]
 gi|50903518|gb|AAT87233.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS10394]
 gi|71802878|gb|AAX72231.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS6180]
 gi|94548132|gb|ABF38178.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS10750]
 gi|134271831|emb|CAM30066.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus pyogenes str. Manfredo]
          Length = 319

 Score = 35.8 bits (81), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L+  E+ ++ +  G     +++ +   V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSLQEKDLVGKVFGGLTLLDTMQSETGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            AI   +  P     L    F E+VH+ ++  I ++L
Sbjct: 75  EAIRADVRTPHEEAVLNNIQFMESVHAKSYSSIFSTL 111


>gi|307706628|ref|ZP_07643435.1| ribonucleoside-diphosphate reductase 2, subunit beta [Streptococcus
           mitis SK321]
 gi|307618083|gb|EFN97243.1| ribonucleoside-diphosphate reductase 2, subunit beta [Streptococcus
           mitis SK321]
          Length = 320

 Score = 35.8 bits (81), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            A+   +  P          F E+VH+ ++  I ++L
Sbjct: 75  QALRADIRTPHEEAVFNNIQFMESVHAKSYSSIFSTL 111


>gi|199598384|ref|ZP_03211803.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           rhamnosus HN001]
 gi|199590703|gb|EDY98790.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           rhamnosus HN001]
          Length = 326

 Score = 35.8 bits (81), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+S   L+ DE+ ++    G     ++L + + +
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRS---LSPDEQWVVGHVFGGLTLLDTLQSQDGM 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            ++ +++   +    L    F E+VH+ ++  I ++L
Sbjct: 75  ASLRQNIRTQQETAVLNNIQFMESVHAKSYSSIFSTL 111


>gi|23335914|ref|ZP_00121145.1| COG0208: Ribonucleotide reductase, beta subunit [Bifidobacterium
           longum DJO10A]
 gi|189440326|ref|YP_001955407.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           longum DJO10A]
 gi|189428761|gb|ACD98909.1| Ribonucleotide reductase beta subunit [Bifidobacterium longum
           DJO10A]
          Length = 330

 Score = 35.8 bits (81), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 19/89 (21%), Positives = 40/89 (44%), Gaps = 3/89 (3%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  W+    +T+DE  +  R        +++      +++     
Sbjct: 38  TGNFWLPEKVPVSNDIPSWQK---MTEDEHTLTMRVFTGLTLLDTIQGTVGAVSLIPDAL 94

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            P         AF E+VH+ ++  I ++L
Sbjct: 95  TPHEEAVYTNIAFMESVHAKSYSSIFSTL 123


>gi|322376536|ref|ZP_08051029.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           sp. M334]
 gi|321282343|gb|EFX59350.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           sp. M334]
          Length = 320

 Score = 35.4 bits (80), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            A+   +  P          F E+VH+ ++  I ++L
Sbjct: 75  QALRADIRTPHEEAVFNNIQFMESVHAKSYSSIFSTL 111


>gi|225351964|ref|ZP_03742987.1| hypothetical protein BIFPSEUDO_03569 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157211|gb|EEG70550.1| hypothetical protein BIFPSEUDO_03569 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 330

 Score = 35.4 bits (80), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 41/190 (21%), Positives = 81/190 (42%), Gaps = 21/190 (11%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           ++PI    +R+ + D+    +  + N+L   K    W++      N W+P +VP+ +DL 
Sbjct: 1   MAPISVPRQRIKLIDRV---SAINWNKLEDDKDLEVWDR---LTGNFWLPEKVPVSNDLP 54

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
           +W++   +++ E  +  R        +++      +++      P         AF E+V
Sbjct: 55  VWRT---MSEAEHTLTMRVFTGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESV 111

Query: 127 HSHTFQYIITSL----GLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRR 182
           H+ ++  I ++L     +DE   F+   E   +  KA   L Y +   SP      KR+ 
Sbjct: 112 HAKSYSSIFSTLCSTRQIDEA--FSWSEENEYLQRKARIVLDYYEG-DSPL-----KRKV 163

Query: 183 SRILTRSLRF 192
           +  L  S  F
Sbjct: 164 ASTLLESFLF 173


>gi|149013339|ref|ZP_01834070.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae SP19-BS75]
 gi|147762929|gb|EDK69876.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae SP19-BS75]
          Length = 320

 Score = 35.4 bits (80), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            A+   +  P          F E+VH+ ++  I ++L
Sbjct: 75  QALRADIRTPHEEAVFNNIQFMESVHAKSYSSIFSTL 111


>gi|300173988|ref|YP_003773154.1| ribonucleoside-diphosphate reductase subunit beta [Leuconostoc
           gasicomitatum LMG 18811]
 gi|299888367|emb|CBL92335.1| ribonucleoside-diphosphate reductase, beta subunit [Leuconostoc
           gasicomitatum LMG 18811]
          Length = 325

 Score = 35.4 bits (80), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 5/97 (5%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    ++D ER  +    G   + ++L + + +
Sbjct: 25  TWEK---LTQQFWLDTRIPISNDLKTWRGN--MSDQERQTMNLVFGGLTTLDTLQSQDGM 79

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
             +   + N +    L    F E+VH+ ++  I  +L
Sbjct: 80  AQLKLDVVNQKEEAVLNNIQFMESVHAKSYSSIFETL 116


>gi|259417680|ref|ZP_05741599.1| ribonucleoside-diphosphate reductase, beta subunit [Silicibacter
           sp. TrichCH4B]
 gi|259346586|gb|EEW58400.1| ribonucleoside-diphosphate reductase, beta subunit [Silicibacter
           sp. TrichCH4B]
          Length = 325

 Score = 35.4 bits (80), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 5/123 (4%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           N W+P +VP+ +D+  W     LT DE+ +  R        +++        + +    P
Sbjct: 34  NFWLPEKVPLSNDIQSWSQ---LTPDEQTLTIRVFTGLTLLDTIQNAVGAPTLMQDAITP 90

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANWALQYTQTL 169
                L   AF EAVH+ ++  + ++L    +  E F    E   + AK+   L      
Sbjct: 91  HEEAVLSNIAFMEAVHARSYSSVFSTLCQTTEVDEAFRWSAENEHLQAKSRLILDEYDAT 150

Query: 170 SSP 172
           +SP
Sbjct: 151 ASP 153


>gi|269102947|ref|ZP_06155644.1| ribonucleotide reductase of class Ia (aerobic) beta subunit
           [Photobacterium damselae subsp. damselae CIP 102761]
 gi|268162845|gb|EEZ41341.1| ribonucleotide reductase of class Ia (aerobic) beta subunit
           [Photobacterium damselae subsp. damselae CIP 102761]
          Length = 377

 Score = 35.4 bits (80), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 3/123 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   N L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSGDRIDY---NNLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPIVSLPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
             ++   +F E +HS ++ +II ++  D   +F+       I  +A    +Y   L S +
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIVNDPAIVFDDIVSNEYIIKRAGDISRYYDELISAT 165

Query: 174 FHY 176
             Y
Sbjct: 166 NDY 168


>gi|148994532|ref|ZP_01823712.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae SP9-BS68]
 gi|147927202|gb|EDK78238.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae SP9-BS68]
          Length = 319

 Score = 35.4 bits (80), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            A+   +  P          F E+VH+ ++  I ++L
Sbjct: 75  QALRADIRTPHEEAVFNNIQFMESVHAKSYSSIFSTL 111


>gi|56808544|ref|ZP_00366279.1| COG0208: Ribonucleotide reductase, beta subunit [Streptococcus
           pyogenes M49 591]
 gi|209559615|ref|YP_002286087.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes NZ131]
 gi|209540816|gb|ACI61392.1| Ribonucleotide reductase of class Ib (aerobic), beta subunit
           [Streptococcus pyogenes NZ131]
          Length = 319

 Score = 35.4 bits (80), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L+  E+ ++ +  G     +++ +   V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSLQEKDLVGKVFGGLTLLDTMQSETGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            AI   +  P     L    F E+VH+ ++  I ++L
Sbjct: 75  EAIRADVRTPHEEAVLNNIQFMESVHAKSYSSIFSTL 111


>gi|319947340|ref|ZP_08021573.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           australis ATCC 700641]
 gi|319746582|gb|EFV98842.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           australis ATCC 700641]
          Length = 319

 Score = 35.4 bits (80), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            A+   +  P          F E+VH+ ++  I ++L
Sbjct: 75  QALRADIRTPHEEAVFNNIQFMESVHAKSYSSIFSTL 111


>gi|149004132|ref|ZP_01828935.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP14-BS69]
 gi|237649545|ref|ZP_04523797.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae CCRI 1974]
 gi|237822455|ref|ZP_04598300.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae CCRI 1974M2]
 gi|147757865|gb|EDK64875.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP14-BS69]
          Length = 320

 Score = 35.4 bits (80), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            A+   +  P          F E+VH+ ++  I ++L
Sbjct: 75  QALRADIRTPHEEAVFNNIQFMESVHAKSYSSIFSTL 111


>gi|253689503|ref|YP_003018693.1| Ribonucleoside-diphosphate reductase [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251756081|gb|ACT14157.1| Ribonucleoside-diphosphate reductase [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 320

 Score = 35.4 bits (80), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 26/119 (21%), Positives = 54/119 (45%), Gaps = 7/119 (5%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
            +N W+P +VP+ +D+  W + N       + +   L    + ++ +    ++       
Sbjct: 28  TSNFWLPEKVPLSNDIPSWSTLNARERQLTIRVFTGLTLLDTIQNTLGAPTLMP---DAV 84

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR---EVPSITAKANWALQY 165
            P     L   +F EAVH+ ++  I ++L L   E+ + YR   E P++  K++  L +
Sbjct: 85  TPHEEAVLSNISFMEAVHARSYSSIFSTLCL-TSEVDDAYRWSEENPALQKKSDIILSH 142


>gi|225860977|ref|YP_002742486.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|298229749|ref|ZP_06963430.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae str. Canada MDR_19F]
 gi|298255394|ref|ZP_06978980.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae str. Canada MDR_19A]
 gi|298502819|ref|YP_003724759.1| ribonucleoside-diphosphate reductase [Streptococcus pneumoniae
           TCH8431/19A]
 gi|225727952|gb|ACO23803.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|298238414|gb|ADI69545.1| ribonucleoside-diphosphate reductase [Streptococcus pneumoniae
           TCH8431/19A]
 gi|327389423|gb|EGE87768.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Streptococcus pneumoniae GA04375]
          Length = 320

 Score = 35.4 bits (80), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            A+   +  P          F E+VH+ ++  I ++L
Sbjct: 75  QALRADIRTPHEEAVFNNIQFMESVHAKSYSSIFSTL 111


>gi|15903110|ref|NP_358660.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae R6]
 gi|116517162|ref|YP_816517.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae D39]
 gi|148985789|ref|ZP_01818917.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP3-BS71]
 gi|148990437|ref|ZP_01821595.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP6-BS73]
 gi|148999044|ref|ZP_01826476.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP11-BS70]
 gi|149008157|ref|ZP_01831676.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae SP18-BS74]
 gi|149026429|ref|ZP_01836566.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP23-BS72]
 gi|168483243|ref|ZP_02708195.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae CDC1873-00]
 gi|168486506|ref|ZP_02711014.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae CDC1087-00]
 gi|168491101|ref|ZP_02715244.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae CDC0288-04]
 gi|168493105|ref|ZP_02717248.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae CDC3059-06]
 gi|168577270|ref|ZP_02723064.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae MLV-016]
 gi|169833110|ref|YP_001694622.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae Hungary19A-6]
 gi|182684087|ref|YP_001835834.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae CGSP14]
 gi|194397329|ref|YP_002037788.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae G54]
 gi|225854653|ref|YP_002736165.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae JJA]
 gi|225856856|ref|YP_002738367.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae P1031]
 gi|225858968|ref|YP_002740478.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae 70585]
 gi|303255568|ref|ZP_07341620.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae BS455]
 gi|303260588|ref|ZP_07346554.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae SP-BS293]
 gi|303262722|ref|ZP_07348661.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae SP14-BS292]
 gi|303265256|ref|ZP_07351167.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae BS397]
 gi|303267603|ref|ZP_07353445.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae BS457]
 gi|303269940|ref|ZP_07355678.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae BS458]
 gi|307067834|ref|YP_003876800.1| ribonucleotide reductase subunit beta [Streptococcus pneumoniae
           AP200]
 gi|307127225|ref|YP_003879256.1| ribonucleoside-diphosphate reductase subunit beta [Streptococcus
           pneumoniae 670-6B]
 gi|15458689|gb|AAK99870.1| Nonessential ribonucleoside-diP reductase 2, subunit beta, class I,
           function unknown [Streptococcus pneumoniae R6]
 gi|116077738|gb|ABJ55458.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae D39]
 gi|147755114|gb|EDK62169.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP11-BS70]
 gi|147760396|gb|EDK67375.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae SP18-BS74]
 gi|147922093|gb|EDK73216.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP3-BS71]
 gi|147924289|gb|EDK75383.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP6-BS73]
 gi|147929260|gb|EDK80261.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP23-BS72]
 gi|168995612|gb|ACA36224.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae Hungary19A-6]
 gi|172043347|gb|EDT51393.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae CDC1873-00]
 gi|182629421|gb|ACB90369.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae CGSP14]
 gi|183570430|gb|EDT90958.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae CDC1087-00]
 gi|183574343|gb|EDT94871.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae CDC0288-04]
 gi|183576617|gb|EDT97145.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae CDC3059-06]
 gi|183577169|gb|EDT97697.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae MLV-016]
 gi|194356996|gb|ACF55444.1| ribonucleoside-diphosphate reductase beta subunit [Streptococcus
           pneumoniae G54]
 gi|225720498|gb|ACO16352.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae 70585]
 gi|225724090|gb|ACO19943.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae JJA]
 gi|225725515|gb|ACO21367.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae P1031]
 gi|301794279|emb|CBW36700.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus pneumoniae INV104]
 gi|301800116|emb|CBW32717.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus pneumoniae OXC141]
 gi|301801954|emb|CBW34682.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus pneumoniae INV200]
 gi|302597474|gb|EFL64568.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae BS455]
 gi|302636154|gb|EFL66650.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae SP14-BS292]
 gi|302638301|gb|EFL68770.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae SP-BS293]
 gi|302640522|gb|EFL70931.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae BS458]
 gi|302642869|gb|EFL73174.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae BS457]
 gi|302645227|gb|EFL75463.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae BS397]
 gi|306409371|gb|ADM84798.1| Ribonucleotide reductase, beta subunit [Streptococcus pneumoniae
           AP200]
 gi|306484287|gb|ADM91156.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae 670-6B]
 gi|332074795|gb|EGI85267.1| ribonucleotide reductase, small chain family protein [Streptococcus
           pneumoniae GA41301]
 gi|332075112|gb|EGI85583.1| ribonucleotide reductase, small chain family protein [Streptococcus
           pneumoniae GA17545]
          Length = 320

 Score = 35.4 bits (80), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            A+   +  P          F E+VH+ ++  I ++L
Sbjct: 75  QALRADIRTPHEEAVFNNIQFMESVHAKSYSSIFSTL 111


>gi|322389171|ref|ZP_08062732.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           parasanguinis ATCC 903]
 gi|321144076|gb|EFX39493.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           parasanguinis ATCC 903]
          Length = 321

 Score = 35.4 bits (80), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V
Sbjct: 23  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGV 76

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            A+   +  P          F E+VH+ ++  I ++L
Sbjct: 77  QALRADIRTPHEEAVFNNIQFMESVHAKSYSSIFSTL 113


>gi|330445621|ref|ZP_08309273.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328489812|dbj|GAA03770.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 377

 Score = 35.4 bits (80), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 3/123 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   N L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSGDRINY---NNLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPIVSIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
             ++   +F E +HS ++ +II ++  +   +F+   E   I  +A    +Y   L + +
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIVNNPSVVFDDIVENEHIIKRAGDISKYYDALIAAT 165

Query: 174 FHY 176
             Y
Sbjct: 166 NDY 168


>gi|325066257|ref|ZP_08124930.1| Ribonucleoside-diphosphate reductase [Actinomyces oris K20]
          Length = 324

 Score = 35.4 bits (80), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 20/89 (22%), Positives = 40/89 (44%), Gaps = 3/89 (3%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  W +   L + E+ M  R        +++      +++     
Sbjct: 32  TGNFWLPEKVPLSNDVQSWAT---LNEAEKNMTTRVFTGLTLLDTIQGTVGAVSLIPDAR 88

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            P     L   AF E+VH+ ++  I ++L
Sbjct: 89  TPHEEAVLTNIAFMESVHARSYSSIFSTL 117


>gi|312867164|ref|ZP_07727374.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           parasanguinis F0405]
 gi|311097293|gb|EFQ55527.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           parasanguinis F0405]
          Length = 321

 Score = 35.4 bits (80), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V
Sbjct: 23  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGV 76

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            A+   +  P          F E+VH+ ++  I ++L
Sbjct: 77  QALRADIRTPHEEAVFNNIQFMESVHAKSYSSIFSTL 113


>gi|229552273|ref|ZP_04440998.1| ribonucleoside-diphosphate reductase [Lactobacillus rhamnosus
           LMS2-1]
 gi|258539683|ref|YP_003174182.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           rhamnosus Lc 705]
 gi|229314345|gb|EEN80318.1| ribonucleoside-diphosphate reductase [Lactobacillus rhamnosus
           LMS2-1]
 gi|257151359|emb|CAR90331.1| Ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           rhamnosus Lc 705]
          Length = 326

 Score = 35.4 bits (80), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+S   L+ DE+ ++    G     ++L + + +
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRS---LSPDEQWVVGHVFGGLTLLDTLQSQDGM 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            ++ +++   +    L    F E+VH+ ++  I ++L
Sbjct: 75  ASLRQNIRTQQETAVLNNIQFMESVHAKSYSSIFSTL 111


>gi|50122260|ref|YP_051427.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
           atrosepticum SCRI1043]
 gi|49612786|emb|CAG76236.1| ribonucleoside-diphosphate reductase 2 beta chain [Pectobacterium
           atrosepticum SCRI1043]
          Length = 320

 Score = 35.4 bits (80), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 9/120 (7%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNI-VLAIYRHL 108
            +N W+P +VP+ +D+  W + N  T + +L I+   G   +    + N +    +    
Sbjct: 28  TSNFWLPEKVPLSNDIPSWSTLN--TRERQLTIRVFTGL--TLLDTIQNTLGAPTLMPDA 83

Query: 109 SNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR---EVPSITAKANWALQY 165
             P     L   +F EAVH+ ++  I ++L L   E+ + YR   E P++  K++  L +
Sbjct: 84  VTPHEEAVLSNISFMEAVHARSYSSIFSTLCL-TSEVDDAYRWSEENPALQKKSDIILSH 142


>gi|258508470|ref|YP_003171221.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           rhamnosus GG]
 gi|257148397|emb|CAR87370.1| Ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           rhamnosus GG]
 gi|259649782|dbj|BAI41944.1| ribonucleotide reductase beta subunit [Lactobacillus rhamnosus GG]
          Length = 326

 Score = 35.4 bits (80), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+S   L+ DE+ ++    G     ++L + + +
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRS---LSPDEQWVVGHVFGGLTLLDTLQSQDGM 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            ++ +++   +    L    F E+VH+ ++  I ++L
Sbjct: 75  ASLRQNIRTQQETAVLNNIQFMESVHAKSYSSIFSTL 111


>gi|310816082|ref|YP_003964046.1| ribonucleoside-diphosphate reductase, beta subunit
           [Ketogulonicigenium vulgare Y25]
 gi|308754817|gb|ADO42746.1| ribonucleoside-diphosphate reductase, beta subunit
           [Ketogulonicigenium vulgare Y25]
          Length = 317

 Score = 35.4 bits (80), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 20/88 (22%), Positives = 40/88 (45%), Gaps = 3/88 (3%)

Query: 51  NNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSN 110
           +N W+P +VP+ +D+  W S    T+ E+ +  R        +++ +     A+ +    
Sbjct: 25  SNFWLPEKVPLSNDIQSWSS---FTEAEKQLTIRVFTGLTLLDTIQSKAGAPALMKDALT 81

Query: 111 PECRQYLLRQAFEEAVHSHTFQYIITSL 138
           P          F EAVH+ ++  I ++L
Sbjct: 82  PHEEAVFANICFMEAVHARSYSSIFSTL 109


>gi|295695705|ref|YP_003588943.1| ribonucleotide reductase [Bacillus tusciae DSM 2912]
 gi|295411307|gb|ADG05799.1| ribonucleotide reductase [Bacillus tusciae DSM 2912]
          Length = 296

 Score = 35.4 bits (80), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 7/101 (6%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP-- 111
           W P E+    D   WK+   LT D++ +I +    F + E  V  ++ L + R +++   
Sbjct: 31  WDPKELDFTQDREDWKT---LTTDQKELILKLCSLFQAGEEAVTRDL-LPLIRVVASEGR 86

Query: 112 -ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYRE 151
            E   YL    FEEA H+ +F+  +  +    G+L   ++E
Sbjct: 87  LEEEMYLTTFLFEEAKHTESFRLFLDEVAEYRGDLAIYHKE 127


>gi|168489010|ref|ZP_02713209.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP195]
 gi|183572389|gb|EDT92917.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP195]
 gi|332073523|gb|EGI84002.1| ribonucleotide reductase, small chain family protein [Streptococcus
           pneumoniae GA17570]
          Length = 320

 Score = 35.4 bits (80), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            A+   +  P          F E+VH+ ++  I ++L
Sbjct: 75  QALRADIRTPHEEAVFNNIQFMESVHAKSYSSIFSTL 111


>gi|326772780|ref|ZP_08232064.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces
           viscosus C505]
 gi|326637412|gb|EGE38314.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces
           viscosus C505]
          Length = 325

 Score = 35.4 bits (80), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 20/89 (22%), Positives = 40/89 (44%), Gaps = 3/89 (3%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  W +   L + E+ M  R        +++      +++     
Sbjct: 33  TGNFWLPEKVPLSNDVQSWAT---LNEAEKNMTTRVFTGLTLLDTIQGTVGAVSLIPDAR 89

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            P     L   AF E+VH+ ++  I ++L
Sbjct: 90  TPHEEAVLTNIAFMESVHARSYSSIFSTL 118


>gi|329945141|ref|ZP_08293009.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces sp.
           oral taxon 170 str. F0386]
 gi|328529340|gb|EGF56255.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces sp.
           oral taxon 170 str. F0386]
          Length = 324

 Score = 35.4 bits (80), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 20/89 (22%), Positives = 40/89 (44%), Gaps = 3/89 (3%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  W +   L + E+ M  R        +++      +++     
Sbjct: 32  TGNFWLPEKVPLSNDVQSWAT---LNEAEKNMTTRVFTGLTLLDTIQGTVGAVSLIPDAR 88

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            P     L   AF E+VH+ ++  I ++L
Sbjct: 89  TPHEEAVLTNIAFMESVHARSYSSIFSTL 117


>gi|296876816|ref|ZP_06900864.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           parasanguinis ATCC 15912]
 gi|296432318|gb|EFH18117.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           parasanguinis ATCC 15912]
          Length = 321

 Score = 35.4 bits (80), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V
Sbjct: 23  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGV 76

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            A+   +  P          F E+VH+ ++  I ++L
Sbjct: 77  QALRADIRTPHEEAVFNNIQFMESVHAKSYSSIFSTL 113


>gi|283835589|ref|ZP_06355330.1| ribonucleoside-diphosphate reductase, beta subunit [Citrobacter
           youngae ATCC 29220]
 gi|291068801|gb|EFE06910.1| ribonucleoside-diphosphate reductase, beta subunit [Citrobacter
           youngae ATCC 29220]
          Length = 319

 Score = 35.4 bits (80), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 19/89 (21%), Positives = 42/89 (47%), Gaps = 3/89 (3%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
            +N W+P +VP+ +D+  W++ +       + +   L    + +++V    ++A      
Sbjct: 27  TSNFWLPEKVPLSNDIPAWQTLSAAEQQLTIRVFTGLTLLDTIQNIVGAPALMA---DSI 83

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            P     L   +F EAVH+ ++  I ++L
Sbjct: 84  TPHEEAVLSNISFMEAVHARSYSSIFSTL 112


>gi|320531976|ref|ZP_08032874.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces sp.
           oral taxon 171 str. F0337]
 gi|320135808|gb|EFW27858.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces sp.
           oral taxon 171 str. F0337]
          Length = 324

 Score = 35.4 bits (80), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 20/89 (22%), Positives = 40/89 (44%), Gaps = 3/89 (3%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  W +   L + E+ M  R        +++      +++     
Sbjct: 32  TGNFWLPEKVPLSNDVQSWAT---LNEAEKNMTTRVFTGLTLLDTIQGTVGAVSLIPDAR 88

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            P     L   AF E+VH+ ++  I ++L
Sbjct: 89  TPHEEAVLTNIAFMESVHARSYSSIFSTL 117


>gi|134097201|ref|YP_001102862.1| ribonucleotide-diphosphate reductase subunit beta
           [Saccharopolyspora erythraea NRRL 2338]
 gi|291005341|ref|ZP_06563314.1| ribonucleotide-diphosphate reductase subunit beta
           [Saccharopolyspora erythraea NRRL 2338]
 gi|238055312|sp|A4F7B2|RIR2H_SACEN RecName: Full=R2-like ligand binding oxidase; AltName:
           Full=Ribonucleotide reductase R2 subunit homolog;
           AltName: Full=Ribonucleotide reductase small subunit
           homolog
 gi|133909824|emb|CAL99936.1| ribonucleoside-diphosphate reductase beta chain [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 317

 Score = 35.4 bits (80), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 6/106 (5%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNI--VLAIYRHLSNP 111
           W P ++    D   W+   GLT++ER  +      F + E  V  ++   +A        
Sbjct: 37  WDPADIDFTRDAEDWQ---GLTEEERRSVAMLCSQFIAGEEAVTQDLQPFMAAMAAEGRF 93

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
               YL +  FEEA H+  F+  + ++GL  G+L +   E P   A
Sbjct: 94  GDEMYLTQFCFEEAKHTQVFRLWMDAVGL-TGDLHSHVAENPGYRA 138


>gi|209972895|ref|YP_002300342.1| gp4 [Bacillus phage SPO1]
 gi|209871215|gb|ACI90971.1| gp4 [Bacillus phage SPO1]
          Length = 346

 Score = 35.4 bits (80), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 27/136 (19%), Positives = 62/136 (45%), Gaps = 7/136 (5%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           ++Y   +  Y    +N W+P  + + +D+  + +    T +  L +   +G  ++ +S +
Sbjct: 35  IRYPQMYTIYKQIRSNFWIPQRISLVEDVRQFPNLPKRTQEAYLDV---IGQLSTLDS-I 90

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD---EGELFNMYREVP 153
              +VL   R LS P  +      A +EA H  ++ Y+++S+  D   + E+F+  +   
Sbjct: 91  QTRLVLEFGRFLSEPTYQPIAANIAQQEATHEESYSYVLSSVVPDTNKQNEVFDKAKTNE 150

Query: 154 SITAKANWALQYTQTL 169
            +  + +   +Y Q  
Sbjct: 151 DVLKRNDRVYKYYQEF 166


>gi|104783944|ref|YP_610442.1| ArsR family transcriptional regulator [Pseudomonas entomophila L48]
 gi|95112931|emb|CAK17659.1| putative transcriptional regulator, ArsR family [Pseudomonas
           entomophila L48]
          Length = 330

 Score = 35.4 bits (80), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 7/58 (12%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
           V +L     GWA E    AC + W+  E   QDDLA W    GLT  + L +    GF
Sbjct: 263 VTELCSHDQGWARE----ACGDLWLGFE---QDDLARWADAAGLTPGDSLYVGLRNGF 313


>gi|15901045|ref|NP_345649.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae TIGR4]
 gi|111657123|ref|ZP_01407908.1| hypothetical protein SpneT_02001649 [Streptococcus pneumoniae
           TIGR4]
 gi|14972661|gb|AAK75289.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           pneumoniae TIGR4]
          Length = 320

 Score = 35.4 bits (80), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            A+   +  P          F E+VH+ ++  I ++L
Sbjct: 75  QALRADIRTPHEEAVFNNIQFMESVHAKSYSSIFSTL 111


>gi|227356095|ref|ZP_03840485.1| ribonucleoside-diphosphate reductase 1, beta subunit [Proteus
           mirabilis ATCC 29906]
 gi|227163740|gb|EEI48652.1| ribonucleoside-diphosphate reductase 1, beta subunit [Proteus
           mirabilis ATCC 29906]
          Length = 376

 Score = 35.4 bits (80), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 3/106 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   N L D E+ +   NL +    +S+   +  +A    +S PE 
Sbjct: 49  WRPEEVDVSRDRIDY---NALPDHEKHIFISNLKYQTLLDSIQGRSPNVAFLPLISIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKA 159
             ++   +F E +HS ++ +II ++  D   +F+   E   I  +A
Sbjct: 106 ETWVETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENKEILKRA 151


>gi|184201049|ref|YP_001855256.1| ribonucleoside-diphosphate reductase beta subunit [Kocuria
           rhizophila DC2201]
 gi|183581279|dbj|BAG29750.1| ribonucleoside-diphosphate reductase beta subunit [Kocuria
           rhizophila DC2201]
          Length = 326

 Score = 35.4 bits (80), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 9/120 (7%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
            +N W+P +VP+ +D+  WK+      D  + +   L    + +  V    ++   + L 
Sbjct: 34  TSNFWLPEKVPLSNDVQSWKTLTAEEQDLTMKVFTGLTLLDTIQGTVGAVSLIPDAKTLH 93

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLG----LDEGELFNMYREVPSITAKANWALQY 165
                  +   AF E+VH+ ++  I ++L     +DE   F   +E   +  KA+  L+Y
Sbjct: 94  EEAVYTNI---AFMESVHAKSYSSIFSTLSSMKQIDEA--FRWSKENEHLQRKADIVLRY 148


>gi|226327851|ref|ZP_03803369.1| hypothetical protein PROPEN_01732 [Proteus penneri ATCC 35198]
 gi|225203555|gb|EEG85909.1| hypothetical protein PROPEN_01732 [Proteus penneri ATCC 35198]
          Length = 376

 Score = 35.4 bits (80), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 3/106 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   N L D E+ +   NL +    +S+   +  +A    +S PE 
Sbjct: 49  WRPEEVDVSRDRIDY---NALPDHEKHIFISNLKYQTLLDSIQGRSPNVAFLPLISIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKA 159
             ++   +F E +HS ++ +II ++  D   +F+   E   I  +A
Sbjct: 106 ETWVETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEEILKRA 151


>gi|269957220|ref|YP_003327009.1| Ribonucleoside-diphosphate reductase [Xylanimonas cellulosilytica
           DSM 15894]
 gi|269305901|gb|ACZ31451.1| Ribonucleoside-diphosphate reductase [Xylanimonas cellulosilytica
           DSM 15894]
          Length = 326

 Score = 35.4 bits (80), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 9/120 (7%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  W +   L++ E+ M  R        +++      +++     
Sbjct: 34  VGNFWVPEKVPVSNDIQSWAT---LSEAEKNMTTRVFTGLTLLDTIQGTVGAVSLIPDAL 90

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL----GLDEGELFNMYREVPSITAKANWALQY 165
            P         AF E+VH+ ++  I ++L     +DE   F      P++  KA   L+Y
Sbjct: 91  TPHEEAVYTNIAFMESVHAKSYSSIFSTLISTKEIDEA--FAWSEANPNLQRKAEIVLEY 148


>gi|300710888|ref|YP_003736702.1| Ribonucleotide reductase beta subunit-like protein [Halalkalicoccus
           jeotgali B3]
 gi|299124571|gb|ADJ14910.1| Ribonucleotide reductase beta subunit-like protein [Halalkalicoccus
           jeotgali B3]
          Length = 297

 Score = 35.4 bits (80), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 6/84 (7%)

Query: 49  ACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV-LAIYRH 107
           A   HW P E+ +  D       +G T  +   ++R L  F + E+ V  ++  LA+   
Sbjct: 24  AVERHWDPAEIDLSVDRERLSQLDGATFTD---LRRTLALFGAGEAAVTEDLAPLAVV-- 78

Query: 108 LSNPECRQYLLRQAFEEAVHSHTF 131
           L   E + ++  Q +EEA H+  F
Sbjct: 79  LEGIEDQMFVTTQLYEEAKHADFF 102


>gi|212716021|ref|ZP_03324149.1| hypothetical protein BIFCAT_00933 [Bifidobacterium catenulatum DSM
           16992]
 gi|212661388|gb|EEB21963.1| hypothetical protein BIFCAT_00933 [Bifidobacterium catenulatum DSM
           16992]
          Length = 330

 Score = 35.4 bits (80), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 41/190 (21%), Positives = 81/190 (42%), Gaps = 21/190 (11%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           ++PI    +R+ + D+    +  + N+L   K    W++      N W+P +VP+ +DL 
Sbjct: 1   MAPISVPRQRIKLIDRV---SAINWNKLEDDKDLEVWDR---LTGNFWLPEKVPVSNDLP 54

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
           +W++   +++ E  +  R        +++      +++      P         AF E+V
Sbjct: 55  VWRA---MSEAEHTLTMRVFTGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESV 111

Query: 127 HSHTFQYIITSL----GLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRR 182
           H+ ++  I ++L     +DE   F+   E   +  KA   L Y +   SP      KR+ 
Sbjct: 112 HAKSYSSIFSTLCSTRQIDEA--FSWSEENEYLQRKARIVLDYYEG-DSPL-----KRKV 163

Query: 183 SRILTRSLRF 192
           +  L  S  F
Sbjct: 164 ASTLLESFLF 173


>gi|197285594|ref|YP_002151466.1| ribonucleotide-diphosphate reductase subunit beta [Proteus
           mirabilis HI4320]
 gi|194683081|emb|CAR43612.1| ribonucleoside-diphosphate reductase 1, beta subunit [Proteus
           mirabilis HI4320]
          Length = 376

 Score = 35.4 bits (80), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 3/106 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   N L D E+ +   NL +    +S+   +  +A    +S PE 
Sbjct: 49  WRPEEVDVSRDRIDY---NALPDHEKHIFISNLKYQTLLDSIQGRSPNVAFLPLISIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKA 159
             ++   +F E +HS ++ +II ++  D   +F+   E   I  +A
Sbjct: 106 ETWVETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEEILKRA 151


>gi|85711601|ref|ZP_01042658.1| ribonucleotide-diphosphate reductase beta subunit [Idiomarina
           baltica OS145]
 gi|85694461|gb|EAQ32402.1| ribonucleotide-diphosphate reductase beta subunit [Idiomarina
           baltica OS145]
          Length = 377

 Score = 35.4 bits (80), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 3/93 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   N LT  E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSRDRVDF---NKLTASEKHVFISNLKYQTLLDSIQGRSPNIALLPIVSLPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELF 146
             ++   +F E +HS ++ +I+ +L  D  E+F
Sbjct: 106 ETWIETWSFFETIHSRSYTHILRNLFSDPSEIF 138


>gi|183601891|ref|ZP_02963260.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           animalis subsp. lactis HN019]
 gi|219682805|ref|YP_002469188.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           animalis subsp. lactis AD011]
 gi|241190381|ref|YP_002967775.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           animalis subsp. lactis Bl-04]
 gi|241195787|ref|YP_002969342.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           animalis subsp. lactis DSM 10140]
 gi|183218776|gb|EDT89418.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           animalis subsp. lactis HN019]
 gi|219620455|gb|ACL28612.1| ribonucleoside-diphosphate reductase 2 beta chain [Bifidobacterium
           animalis subsp. lactis AD011]
 gi|240248773|gb|ACS45713.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           animalis subsp. lactis Bl-04]
 gi|240250341|gb|ACS47280.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           animalis subsp. lactis DSM 10140]
 gi|295793368|gb|ADG32903.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           animalis subsp. lactis V9]
          Length = 321

 Score = 35.4 bits (80), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 26/122 (21%), Positives = 52/122 (42%), Gaps = 9/122 (7%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  W+    ++D E  +  R        +++      +++     
Sbjct: 29  TGNFWLPEKVPVSNDIPDWRQ---MSDAEHTLTMRVFTGLTLLDTIQGTVGAVSLIPDAL 85

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL----GLDEGELFNMYREVPSITAKANWALQY 165
            P         AF E+VH+ ++  I ++L     +DE   F+   + P +  KA   L Y
Sbjct: 86  TPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTREIDEA--FDWSEKNPHLQRKAQIVLDY 143

Query: 166 TQ 167
            +
Sbjct: 144 YE 145


>gi|329117318|ref|ZP_08246035.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           parauberis NCFD 2020]
 gi|326907723|gb|EGE54637.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           parauberis NCFD 2020]
          Length = 321

 Score = 35.4 bits (80), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L   E+ ++ +  G     +++ +   V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LPAKEKDLVGKVFGGLTLLDTMQSETGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            AI   +  P     L    F E+VH+ ++  I ++L
Sbjct: 75  EAIRADVRTPHEEAVLNNIQFMESVHAKSYSSIFSTL 111


>gi|329296713|ref|ZP_08254049.1| ribonucleoside-diphosphate reductase [Plautia stali symbiont]
          Length = 319

 Score = 35.4 bits (80), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 3/89 (3%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
            NN W+P +VP+ +DL  W+S         + +   L    + ++++       +     
Sbjct: 27  TNNFWLPEKVPLSNDLPAWQSLAPQQQQLTIRVFTGLTLLDTIQNVIG---APGLMEDAL 83

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            P     L   +F EAVH+ ++  I ++L
Sbjct: 84  TPHEEAVLSNISFMEAVHARSYSSIFSTL 112


>gi|327197767|ref|YP_004301465.1| gp132 [Brochothrix phage A9]
 gi|299810367|gb|ADJ53166.1| gp132 [Brochothrix phage A9]
          Length = 203

 Score = 35.4 bits (80), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 7/98 (7%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK  S     W  T VP+ +DL  W++ + +  D   +  +  G     ++L + + +
Sbjct: 29  TWEKLNSQF---WTATRVPVSNDLDDWRTLDPVAKD---LYGKVFGGLTLLDTLQSQDGM 82

Query: 102 LAIYRH-LSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           L++  +   +P  R  L    F EA+H+ ++  I ++L
Sbjct: 83  LSLLNNETQSPHMRAVLSNMLFMEAIHAQSYSTIFSTL 120


>gi|289178104|gb|ADC85350.1| Ribonucleoside-diphosphate reductase beta chain [Bifidobacterium
           animalis subsp. lactis BB-12]
          Length = 326

 Score = 35.4 bits (80), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 26/122 (21%), Positives = 52/122 (42%), Gaps = 9/122 (7%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  W+    ++D E  +  R        +++      +++     
Sbjct: 34  TGNFWLPEKVPVSNDIPDWRQ---MSDAEHTLTMRVFTGLTLLDTIQGTVGAVSLIPDAL 90

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL----GLDEGELFNMYREVPSITAKANWALQY 165
            P         AF E+VH+ ++  I ++L     +DE   F+   + P +  KA   L Y
Sbjct: 91  TPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTREIDEA--FDWSEKNPHLQRKAQIVLDY 148

Query: 166 TQ 167
            +
Sbjct: 149 YE 150


>gi|227876139|ref|ZP_03994257.1| ribonucleoside-diphosphate reductase [Mobiluncus mulieris ATCC
           35243]
 gi|227843295|gb|EEJ53486.1| ribonucleoside-diphosphate reductase [Mobiluncus mulieris ATCC
           35243]
          Length = 333

 Score = 35.4 bits (80), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 20/117 (17%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR---NLGFFASSESLVANNIVLAIYR 106
            +N W+P +VP+ +DL  W   N L+D ER +  R    L    + ++ V    +  I  
Sbjct: 42  TSNFWLPEKVPLSNDLPSW---NQLSDMERNVTMRVFTGLTMLDTVQATVGE--ISQIQD 96

Query: 107 HLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWAL 163
            ++  E   Y    AF +AVH+ ++  I ++L              P I A   WA+
Sbjct: 97  GITEHEQAIY-ANIAFMQAVHARSYSSIFSTLS-----------NTPEIDAAYTWAV 141


>gi|307268568|ref|ZP_07549940.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX4248]
 gi|306515057|gb|EFM83600.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX4248]
          Length = 321

 Score = 35.4 bits (80), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 22/97 (22%), Positives = 45/97 (46%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W++   L+D E+  +    G F   +++ + + +
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRT---LSDLEKTTVGYVFGGFTLLDTVQSESGM 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
             +   +  P     L    F E+VH+ ++  I ++L
Sbjct: 75  DQLRNDVRTPHEEAVLNNIQFMESVHAKSYSSIFSTL 111


>gi|312262463|gb|ADQ52758.1| NrdB aerobic NDP reductase small subunit [Aeromonas phage PX29]
          Length = 376

 Score = 35.0 bits (79), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 29/118 (24%), Positives = 56/118 (47%), Gaps = 3/118 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D A+  S+  L++ E+ +  +NL + +  +S+      L     +S+   
Sbjct: 48  WRPEEVDLSKD-AIDYSR--LSEQEQYVFTQNLKYQSLLDSVQGRAPNLVFLPIVSDVAL 104

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSS 171
             ++   +F E +HS ++ +I+ +L +D   +F+       I A+A    QY   L S
Sbjct: 105 ETWITTWSFSETIHSRSYTHIMRNLYVDPSAVFDRILLDAKIMARATSVTQYYDDLIS 162


>gi|89074073|ref|ZP_01160574.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
           sp. SKA34]
 gi|89050211|gb|EAR55722.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
           sp. SKA34]
          Length = 377

 Score = 35.0 bits (79), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 3/123 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   N L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSGDRINY---NNLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPIVSLPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
             ++   +F E +HS ++ +II ++  +   +F+   E   I  +A    +Y   L + +
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIVNNPSVVFDDIVENEHIVKRAGDISKYYDDLITVT 165

Query: 174 FHY 176
             Y
Sbjct: 166 NDY 168


>gi|322387902|ref|ZP_08061509.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           infantis ATCC 700779]
 gi|321141175|gb|EFX36673.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           infantis ATCC 700779]
          Length = 320

 Score = 35.0 bits (79), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSNQEKDLVGKVFGGLTLLDTMQSETGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            A+   +  P          F E+VH+ ++  I ++L
Sbjct: 75  NALRADIRTPHEEAVFNNIQFMESVHAKSYSSIFSTL 111


>gi|260578497|ref|ZP_05846410.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
           [Corynebacterium jeikeium ATCC 43734]
 gi|258603378|gb|EEW16642.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
           [Corynebacterium jeikeium ATCC 43734]
          Length = 338

 Score = 35.0 bits (79), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 15/95 (15%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
            +N W+P +VP+ +DL  W   N LTD ER +  +          L   + V A    +S
Sbjct: 42  TSNFWLPEKVPLSNDLPTW---NALTDAERELTTKVF------TGLTLLDTVQATVGEIS 92

Query: 110 N-PECRQ-----YLLRQAFEEAVHSHTFQYIITSL 138
             P+ R           AF +AVH+ ++  + +++
Sbjct: 93  QIPDARTEHEQAVYANIAFMQAVHARSYSSVFSTM 127


>gi|322391986|ref|ZP_08065450.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           peroris ATCC 700780]
 gi|321145212|gb|EFX40609.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           peroris ATCC 700780]
          Length = 320

 Score = 35.0 bits (79), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            A+   +  P          F E+VH+ ++  I ++L
Sbjct: 75  NALRADIRTPHEEAVFNNIQFMESVHAKSYSSIFSTL 111


>gi|282600304|ref|ZP_05973774.2| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rustigianii DSM 4541]
 gi|282565783|gb|EFB71318.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rustigianii DSM 4541]
          Length = 380

 Score = 35.0 bits (79), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 3/106 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   N L D E+ +   NL +    +S+   +  +A    +S PE 
Sbjct: 53  WRPEEVDVSRDRIDY---NALPDHEKHIFISNLKYQTLLDSIQGRSPNVAFLPLISIPEL 109

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKA 159
             ++   +F E +HS ++ +II ++  D   +F+   E   I  +A
Sbjct: 110 ETWVETWSFSETIHSRSYTHIIRNIVNDPAIIFDDIVENEEILKRA 155


>gi|326567429|gb|EGE17544.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis BC1]
          Length = 361

 Score = 35.0 bits (79), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 30/141 (21%), Positives = 61/141 (43%), Gaps = 3/141 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P E+ +  D    +    L + E+ +   NL +    +S+   +  + +   +S PE 
Sbjct: 48  WRPEEIDVSKDR---RDFIELPEHEQHIFVSNLKYQTLLDSVQGRSPNVVLLPLVSVPEL 104

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
             ++   AF E++H+ ++ +II ++  +  E+ +     P I  +A    +Y   L S S
Sbjct: 105 ETWIETWAFFESIHARSYTHIIRNIFNNPSEILDDIVINPEIIKRAESISKYYDELHSLS 164

Query: 174 FHYWNKRRRSRILTRSLRFLC 194
             Y   ++      R   +LC
Sbjct: 165 LEYQQGKQVDMYELRKRLYLC 185


>gi|283457964|ref|YP_003362570.1| ribonucleotide reductase subunit beta [Rothia mucilaginosa DY-18]
 gi|283133985|dbj|BAI64750.1| ribonucleotide reductase, beta subunit [Rothia mucilaginosa DY-18]
          Length = 325

 Score = 35.0 bits (79), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 5/118 (4%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  WK+   LT++E+ +  R        +++      +++     
Sbjct: 33  TGNFWLPEKVPLSNDVPSWKT---LTEEEKQLTMRVFTGLTLLDTIQGTVGAVSLLPDAV 89

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQY 165
                      AF E+VH+ ++  I ++L   +   E F    E   +  KA   L Y
Sbjct: 90  TAHEEAVYTNIAFMESVHAKSYSSIFSTLASTKEIDEAFRWASENEHLQKKAKIVLSY 147


>gi|116494955|ref|YP_806689.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           casei ATCC 334]
 gi|191638466|ref|YP_001987632.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           casei BL23]
 gi|227535043|ref|ZP_03965092.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|239631445|ref|ZP_04674476.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|116105105|gb|ABJ70247.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Lactobacillus casei ATCC 334]
 gi|190712768|emb|CAQ66774.1| Ribonucleoside-diphosphate reductase, beta chain [Lactobacillus
           casei BL23]
 gi|227187358|gb|EEI67425.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|239525910|gb|EEQ64911.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|327382498|gb|AEA53974.1| hypothetical protein LC2W_1641 [Lactobacillus casei LC2W]
 gi|327385696|gb|AEA57170.1| hypothetical protein LCBD_1674 [Lactobacillus casei BD-II]
          Length = 326

 Score = 35.0 bits (79), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 27/121 (22%), Positives = 56/121 (46%), Gaps = 8/121 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+S   L  DE+ ++    G     ++L + + +
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRS---LNHDEQWVVGHVFGGLTLLDTLQSQDGM 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYREVPSITAKA 159
            ++ +++   +    L    F E+VH+ ++  I ++L    +  E+F+       +  KA
Sbjct: 75  ASLRQNIRTQQETAVLNNIQFMESVHAKSYSSIFSTLNTPAEIDEIFDWTNHNEHLQYKA 134

Query: 160 N 160
           N
Sbjct: 135 N 135


>gi|238784826|ref|ZP_04628827.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           bercovieri ATCC 43970]
 gi|238714242|gb|EEQ06253.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           bercovieri ATCC 43970]
          Length = 323

 Score = 35.0 bits (79), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 26/116 (22%), Positives = 52/116 (44%), Gaps = 5/116 (4%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           N W+P +VP+ +D+  W +   LT +E+ +  R        +++       A+ +    P
Sbjct: 33  NFWLPEKVPLSNDIPSWAT---LTPNEQQLTIRVFTGLTLLDTIQNTLGAPALIKDAMTP 89

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYREVPSITAKANWALQY 165
                    +F EAVH+ ++  I ++L +  D  + +    E   +  KA+  LQ+
Sbjct: 90  HEEAVFSNISFMEAVHARSYSSIFSTLCMTSDVDDAYRWSEENGPLQKKADIILQH 145


>gi|188533366|ref|YP_001907163.1| ribonucleotide-diphosphate reductase subunit beta [Erwinia
           tasmaniensis Et1/99]
 gi|188028408|emb|CAO96269.1| Ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           tasmaniensis Et1/99]
          Length = 376

 Score = 35.0 bits (79), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 24/94 (25%), Positives = 47/94 (50%), Gaps = 3/94 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +++   L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSRDRIDYQA---LPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFN 147
             ++   AF E +HS ++ +II ++  D   +F+
Sbjct: 106 ETWIETWAFSETIHSRSYTHIIRNIVNDPALVFD 139


>gi|326564074|gb|EGE14316.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis 103P14B1]
 gi|326570555|gb|EGE20595.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis BC8]
 gi|326573198|gb|EGE23167.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis CO72]
          Length = 361

 Score = 35.0 bits (79), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 30/141 (21%), Positives = 61/141 (43%), Gaps = 3/141 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P E+ +  D    +    L + E+ +   NL +    +S+   +  + +   +S PE 
Sbjct: 48  WRPEEIDVSKDR---RDFIELPEHEQHIFVSNLKYQTLLDSVQGRSPNVVLLPLVSVPEL 104

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
             ++   AF E++H+ ++ +II ++  +  E+ +     P I  +A    +Y   L S S
Sbjct: 105 ETWIETWAFFESIHARSYTHIIRNIFNNPSEILDDIVINPEIIKRAESISKYYDELHSLS 164

Query: 174 FHYWNKRRRSRILTRSLRFLC 194
             Y   ++      R   +LC
Sbjct: 165 LEYQQGKQVDMYELRKRLYLC 185


>gi|301066519|ref|YP_003788542.1| ribonucleotide reductase subunit beta [Lactobacillus casei str.
           Zhang]
 gi|300438926|gb|ADK18692.1| Ribonucleotide reductase, beta subunit [Lactobacillus casei str.
           Zhang]
          Length = 326

 Score = 35.0 bits (79), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 27/121 (22%), Positives = 56/121 (46%), Gaps = 8/121 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+S   L  DE+ ++    G     ++L + + +
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRS---LNHDEQWVVGHVFGGLTLLDTLQSQDGM 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYREVPSITAKA 159
            ++ +++   +    L    F E+VH+ ++  I ++L    +  E+F+       +  KA
Sbjct: 75  ASLRQNIRTQQETAVLNNIQFMESVHAKSYSSIFSTLNTPAEIDEIFDWTNHNEHLQYKA 134

Query: 160 N 160
           N
Sbjct: 135 N 135


>gi|68535290|ref|YP_249995.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           jeikeium K411]
 gi|68262889|emb|CAI36377.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           jeikeium K411]
          Length = 338

 Score = 35.0 bits (79), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 15/95 (15%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
            +N W+P +VP+ +DL  W   N LTD ER +  +          L   + V A    +S
Sbjct: 42  TSNFWLPEKVPLSNDLPTW---NALTDAERELTTKVF------TGLTLLDTVQATVGEIS 92

Query: 110 N-PECRQ-----YLLRQAFEEAVHSHTFQYIITSL 138
             P+ R           AF +AVH+ ++  + +++
Sbjct: 93  QIPDARTEHEQAVYANIAFMQAVHARSYSSVFSTM 127


>gi|149911236|ref|ZP_01899859.1| ribonucleotide-diphosphate reductase beta subunit [Moritella sp.
           PE36]
 gi|149805690|gb|EDM65689.1| ribonucleotide-diphosphate reductase beta subunit [Moritella sp.
           PE36]
          Length = 376

 Score = 35.0 bits (79), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 3/94 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   ++    L D E+ +   NL +    +S+   +  +A    +S PE 
Sbjct: 49  WRPEEVDVSKDRIDYQQ---LPDHEKHIFISNLKYQTLLDSIQGRSPNVAFLPLVSLPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFN 147
             ++   +F E +HS ++ +II ++  D  E+F+
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIINDPSEVFD 139


>gi|38639969|ref|NP_943924.1| NrdB aerobic NDP reductase small subunit [Aeromonas phage Aeh1]
 gi|33414658|gb|AAQ17701.1| NrdB aerobic NDP reductase small subunit [Aeromonas phage Aeh1]
          Length = 376

 Score = 35.0 bits (79), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 27/116 (23%), Positives = 53/116 (45%), Gaps = 3/116 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   N L++ E+ +  +NL + +  +S+      L     +S+   
Sbjct: 48  WRPEEVDLSKDAIDY---NQLSEAEQHVFTQNLKYQSLLDSVQGRAPNLVFLPIVSDVAL 104

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
             ++   +F E +HS ++ +I+ +L +D   +F+       I A+A    QY   L
Sbjct: 105 ETWITTWSFSETIHSRSYTHIMRNLYVDPSAVFDRILLDSKIMARATSVTQYYDNL 160


>gi|292489180|ref|YP_003532067.1| ribonucleoside-diphosphate reductase 2 subunit beta [Erwinia
           amylovora CFBP1430]
 gi|292900297|ref|YP_003539666.1| ribonucleoside-diphosphate reductase 2 subunit beta [Erwinia
           amylovora ATCC 49946]
 gi|291200145|emb|CBJ47271.1| ribonucleoside-diphosphate reductase 2 beta chain [Erwinia
           amylovora ATCC 49946]
 gi|291554614|emb|CBA22274.1| ribonucleoside-diphosphate reductase 2 beta chain [Erwinia
           amylovora CFBP1430]
          Length = 319

 Score = 35.0 bits (79), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 3/89 (3%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
            +N W+P +VP+ +D+  W   N L+ DE+ +  R        +++       A+     
Sbjct: 27  TSNFWLPEKVPLSNDIPSW---NSLSADEQQLTIRVFTGLTLLDTIQNTLGAPALMADAL 83

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            P     +   +F EAVH+ ++  I ++L
Sbjct: 84  TPHEEAVMSNISFMEAVHARSYSSIFSTL 112


>gi|92112513|ref|YP_572441.1| ribonucleotide-diphosphate reductase subunit beta [Chromohalobacter
           salexigens DSM 3043]
 gi|91795603|gb|ABE57742.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Chromohalobacter salexigens DSM 3043]
          Length = 326

 Score = 35.0 bits (79), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 19/87 (21%), Positives = 39/87 (44%), Gaps = 3/87 (3%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           N W+P +VP+ +D++ W   N LT+ E+ +  R        +++        +      P
Sbjct: 36  NFWLPEKVPLSNDVSAW---NTLTEQEQTLTIRVFTGLTLLDTIQGTIGAPTLIEDAVTP 92

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSL 138
                    +F E+VH+ ++  I ++L
Sbjct: 93  HEEAVFTNISFMESVHARSYSSIFSTL 119


>gi|251790602|ref|YP_003005323.1| ribonucleotide-diphosphate reductase subunit beta [Dickeya zeae
           Ech1591]
 gi|247539223|gb|ACT07844.1| ribonucleotide reductase [Dickeya zeae Ech1591]
          Length = 376

 Score = 35.0 bits (79), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 24/94 (25%), Positives = 47/94 (50%), Gaps = 3/94 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   ++   GL + E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSRDRIDYQ---GLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFN 147
             ++   AF E +HS ++ +II ++  D   +F+
Sbjct: 106 ETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFD 139


>gi|238897538|ref|YP_002923217.1| ribonucleoside-diphosphate reductase 1, beta subunit [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
 gi|229465295|gb|ACQ67069.1| ribonucleoside-diphosphate reductase 1, beta subunit [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
          Length = 376

 Score = 35.0 bits (79), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 16/145 (11%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           NN  L P+  G+  VNV       AR D  Q  P+ +    EK LS     W P E+ + 
Sbjct: 11  NNQLLEPMFLGQT-VNV-------ARYD-QQKYPI-FEELIEKQLSF---FWRPEEIDVS 57

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D   ++S   L + E+ +   NL +    +S+   +  +A+   +S PE   ++   AF
Sbjct: 58  RDRIDYQS---LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWIETWAF 114

Query: 123 EEAVHSHTFQYIITSLGLDEGELFN 147
            E +HS ++ +II ++  D   +F+
Sbjct: 115 SETIHSRSYTHIIRNIVNDPSCIFD 139


>gi|227833933|ref|YP_002835640.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           aurimucosum ATCC 700975]
 gi|262184936|ref|ZP_06044357.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           aurimucosum ATCC 700975]
 gi|227454949|gb|ACP33702.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 329

 Score = 35.0 bits (79), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 20/90 (22%), Positives = 39/90 (43%), Gaps = 3/90 (3%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  WK+   LT+ E+    R        +++      +++     
Sbjct: 37  TGNFWLPEKVPVSNDIPSWKT---LTEKEQETTMRVFAGLTLLDTIQGTVGAVSLLPDAV 93

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
            P         AF E+VH+ ++  I  +L 
Sbjct: 94  TPHEEAVYTNIAFMESVHAKSYSNIFMTLA 123


>gi|87120532|ref|ZP_01076426.1| ribonucleotide-diphosphate reductase beta subunit [Marinomonas sp.
           MED121]
 gi|86164175|gb|EAQ65446.1| ribonucleotide-diphosphate reductase beta subunit [Marinomonas sp.
           MED121]
          Length = 377

 Score = 35.0 bits (79), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 3/106 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D    K    L   E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDLSSDR---KDFQHLEAHEQHIFLSNLKYQTLLDSVQGRSPNVALLPIVSIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKA 159
             ++   +F E +HS ++ +II ++  + G +F+   E   IT +A
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIVNEPGVVFDDITENTEITKRA 151


>gi|326536370|ref|YP_004300811.1| NrdB aerobic NDP reductase small subunit [Acinetobacter phage 133]
 gi|299483451|gb|ADJ19545.1| NrdB aerobic NDP reductase small subunit [Acinetobacter phage 133]
          Length = 382

 Score = 35.0 bits (79), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 7/110 (6%)

Query: 54  WMPTEVPMQDDLA----LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
           W P EV +  D A    LW++  G     + +   NLG+    +S+      + +    S
Sbjct: 47  WRPEEVNLTTDKAQFDKLWETNRGHL---QTIFTDNLGYQILMDSVQGRAPAIVLASICS 103

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKA 159
           +     +++   F E +HS ++ +II +L  D  ++F+       I A+A
Sbjct: 104 DVALETWIMTWTFSETIHSRSYTHIIRNLYSDPSKIFDGVLANKEIMARA 153


>gi|255327220|ref|ZP_05368295.1| ribonucleoside-diphosphate reductase, beta subunit [Rothia
           mucilaginosa ATCC 25296]
 gi|255295838|gb|EET75180.1| ribonucleoside-diphosphate reductase, beta subunit [Rothia
           mucilaginosa ATCC 25296]
          Length = 325

 Score = 35.0 bits (79), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 5/118 (4%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  WK+   LT++E+ +  R        +++      +++     
Sbjct: 33  TGNFWLPEKVPLSNDVPSWKT---LTEEEKQLTMRVFTGLTLLDTIQGTVGAVSLLPDAV 89

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQY 165
                      AF E+VH+ ++  I ++L   +   E F    E   +  KA   L Y
Sbjct: 90  TAHEEAVYTNIAFMESVHAKSYSSIFSTLASTKEIDEAFRWAAENEHLQKKAKIVLSY 147


>gi|238796650|ref|ZP_04640156.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           mollaretii ATCC 43969]
 gi|238719381|gb|EEQ11191.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           mollaretii ATCC 43969]
          Length = 323

 Score = 35.0 bits (79), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 26/116 (22%), Positives = 52/116 (44%), Gaps = 5/116 (4%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           N W+P +VP+ +D+  W +   LT +E+ +  R        +++       A+ +    P
Sbjct: 33  NFWLPEKVPLSNDIPSWAT---LTPNEQQLTIRVFTGLTLLDTIQNTLGAPALIKDAITP 89

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYREVPSITAKANWALQY 165
                    +F EAVH+ ++  I ++L +  D  + +    E   +  KA+  LQ+
Sbjct: 90  HEEAVFSNISFMEAVHARSYSSIFSTLCMTSDVDDAYRWSEENGPLQKKADIILQH 145


>gi|117920413|ref|YP_869605.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella sp.
           ANA-3]
 gi|117612745|gb|ABK48199.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella sp. ANA-3]
          Length = 391

 Score = 34.7 bits (78), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 3/94 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   N L D E+ +   NL +    +S+   +  +A    +S PE 
Sbjct: 64  WRPEEVDVSRDKIDY---NSLPDHEKHIFISNLKYQTLLDSIQGRSPNVAFLPLVSLPEL 120

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFN 147
             ++   +F E +HS ++ +II ++  D   +F+
Sbjct: 121 ETWIETWSFSETIHSRSYTHIIRNIVNDPSVIFD 154


>gi|290473788|ref|YP_003466662.1| ribonucleoside-diphosphate reductase 1 subunit beta [Xenorhabdus
           bovienii SS-2004]
 gi|289173095|emb|CBJ79868.1| ribonucleoside-diphosphate reductase 1, beta subunit [Xenorhabdus
           bovienii SS-2004]
          Length = 376

 Score = 34.7 bits (78), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 3/94 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   N L D E+ +   NL +    +S+   +  +A    +S PE 
Sbjct: 49  WRPEEVDVSRDRIDY---NALPDHEKHIFISNLKYQTLLDSIQGRSPNVAFLPLISIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFN 147
             ++   +F E +HS ++ +II ++  D   +F+
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIVNDPAIVFD 139


>gi|66391280|ref|YP_238601.1| ORF025 [Staphylococcus phage Twort]
 gi|62637210|gb|AAX92321.1| ORF025 [Staphylococcus phage Twort]
          Length = 349

 Score = 34.7 bits (78), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 30/128 (23%), Positives = 57/128 (44%), Gaps = 6/128 (4%)

Query: 49  ACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHL 108
           A  + W+P +  +  D++ W   N LTD E+   K+ L      ++  +   +  I  H 
Sbjct: 37  ATTSFWLPEDFDISRDVSSW---NKLTDIEKDTYKKVLAGLTGLDTKQSVEGMSLIAHHE 93

Query: 109 SNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREV-PSITAKANWALQY 165
                 Q      F E++H+ ++ +I T+L L++    L N + E  P +  KA +   +
Sbjct: 94  PRTRFAQVYTAFDFYESIHAKSYSHIFTTLLLNKETNYLLNEWVEQEPHLKKKAQYIGYF 153

Query: 166 TQTLSSPS 173
            + L  P+
Sbjct: 154 YEKLEQPN 161


>gi|42543295|pdb|1PM2|A Chain A, Crystal Structure Of Manganese Substituted R2-D84e (D84e
           Mutant Of The R2 Subunit Of E. Coli Ribonucleotide
           Reductase)
 gi|42543296|pdb|1PM2|B Chain B, Crystal Structure Of Manganese Substituted R2-D84e (D84e
           Mutant Of The R2 Subunit Of E. Coli Ribonucleotide
           Reductase)
          Length = 339

 Score = 34.7 bits (78), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 24/94 (25%), Positives = 47/94 (50%), Gaps = 3/94 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +++   L + E+ +   NL +    ES+   +  +A+   +S PE 
Sbjct: 48  WRPEEVDVSRDRIDYQA---LPEHEKHIFISNLKYQTLLESIQGRSPNVALLPLISIPEL 104

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFN 147
             ++   AF E +HS ++ +II ++  D   +F+
Sbjct: 105 ETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFD 138


>gi|3891570|pdb|2AV8|A Chain A, Y122f Mutant Of Ribonucleotide Reductase From Escherichia
           Coli
 gi|3891571|pdb|2AV8|B Chain B, Y122f Mutant Of Ribonucleotide Reductase From Escherichia
           Coli
          Length = 340

 Score = 34.7 bits (78), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 24/94 (25%), Positives = 47/94 (50%), Gaps = 3/94 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +++   L + E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 48  WRPEEVDVSRDRIDYQA---LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPEL 104

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFN 147
             ++   AF E +HS +F +II ++  D   +F+
Sbjct: 105 ETWVETWAFSETIHSRSFTHIIRNIVNDPSVVFD 138


>gi|238896131|ref|YP_002920867.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella
           pneumoniae NTUH-K2044]
 gi|238548449|dbj|BAH64800.1| ribonucleotide-diphosphate reductase beta subunit [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 333

 Score = 34.7 bits (78), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 3/88 (3%)

Query: 51  NNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSN 110
           +N W+P +VP+ +D+  W++ +       + +   L    + ++ V    ++A       
Sbjct: 42  SNFWLPEKVPLSNDIPAWQTLSAAEQQLTIRVFTGLTLLDTIQNTVGAPALMA---DALT 98

Query: 111 PECRQYLLRQAFEEAVHSHTFQYIITSL 138
           P     L   +F EAVH+ ++  I ++L
Sbjct: 99  PHEEAVLSNISFMEAVHARSYSSIFSTL 126


>gi|300723737|ref|YP_003713044.1| ribonucleoside-diphosphate reductase 1 subunit beta [Xenorhabdus
           nematophila ATCC 19061]
 gi|297630261|emb|CBJ90912.1| ribonucleoside-diphosphate reductase 1, beta subunit [Xenorhabdus
           nematophila ATCC 19061]
          Length = 376

 Score = 34.7 bits (78), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 3/123 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   N L D E+ +   NL +    +S+   +  +A    +S PE 
Sbjct: 49  WRPEEVDVSRDRIDY---NSLPDHEKHIFISNLKYQTLLDSIQGRSPNVAFLPLISIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
             ++   +F E +HS ++ +II ++  D   +F+   E   I  +A     Y   L   +
Sbjct: 106 ETWVETWSFSETIHSRSYTHIIRNIVNDPSIVFDDIVENEQILKRAKDISAYYDDLIEMT 165

Query: 174 FHY 176
            +Y
Sbjct: 166 NYY 168


>gi|294637129|ref|ZP_06715438.1| ribonucleoside-diphosphate reductase, beta subunit [Edwardsiella
           tarda ATCC 23685]
 gi|291089663|gb|EFE22224.1| ribonucleoside-diphosphate reductase, beta subunit [Edwardsiella
           tarda ATCC 23685]
          Length = 376

 Score = 34.7 bits (78), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 27/124 (21%), Positives = 59/124 (47%), Gaps = 4/124 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +++   L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSRDRIDYQA---LPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKA-NWALQYTQTLSSP 172
             ++   +F E +HS ++ +II ++  D   +F+       I  +A + ++ Y   + S 
Sbjct: 106 ETWVETWSFSETIHSRSYTHIIRNIVTDPSVVFDDIVSNEEILKRARDISVYYDDLIEST 165

Query: 173 SFHY 176
            +++
Sbjct: 166 GYYH 169


>gi|197284313|ref|YP_002150185.1| ribonucleotide-diphosphate reductase subunit beta [Proteus
           mirabilis HI4320]
 gi|194681800|emb|CAR41036.1| ribonucleoside-diphosphate reductase beta chain [Proteus mirabilis
           HI4320]
          Length = 322

 Score = 34.7 bits (78), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 5/118 (4%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           N W+P ++P+ +D+  W   N LT  E+ +  R        +++        +      P
Sbjct: 32  NFWLPEKIPLSNDIPSW---NTLTQAEKQLTIRVFTGLTLLDTIQNTVGAPTLMPDAQTP 88

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYREVPSITAKANWALQYTQ 167
                L    F EAVH+ ++  I ++L L  D  + +    E   +  K++  L+Y Q
Sbjct: 89  HEEAVLSNICFMEAVHARSYSSIFSTLCLTTDVDDAYRWSEENTYLQKKSDIILRYYQ 146


>gi|146312444|ref|YP_001177518.1| ribonucleotide-diphosphate reductase subunit beta [Enterobacter sp.
           638]
 gi|145319320|gb|ABP61467.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Enterobacter sp. 638]
          Length = 376

 Score = 34.7 bits (78), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 24/94 (25%), Positives = 47/94 (50%), Gaps = 3/94 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +++   L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSRDRIDFQA---LPDHEKHIFLSNLKYQTLLDSIQGRSPNVALLPLISIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFN 147
             ++   AF E +HS ++ +II ++  D   +F+
Sbjct: 106 ETWVETWAFSETIHSRSYTHIIRNIVNDPAVVFD 139


>gi|238750475|ref|ZP_04611976.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia rohdei
           ATCC 43380]
 gi|238711406|gb|EEQ03623.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia rohdei
           ATCC 43380]
          Length = 323

 Score = 34.7 bits (78), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 32/147 (21%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           N W+P +VP+ +D+  W +   LT +E+ +  R        +++       A+ +    P
Sbjct: 33  NFWLPEKVPLSNDIPSWAT---LTPNEQQLTIRVFTGLTLLDTIQNTLGAPALIKDAITP 89

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYREVPSITAKANWALQYTQTL 169
                    +F EAVH+ ++  I ++L +  D  + +    E   +  KA+  LQ     
Sbjct: 90  HEEAVFSNISFMEAVHARSYSSIFSTLCMTSDVDDAYRWSEENGPLQKKADIILQ----- 144

Query: 170 SSPSFHYWN----KRRRSRILTRSLRF 192
                HY N    K++ + +   S  F
Sbjct: 145 -----HYHNEDPLKKKIASVFLESFLF 166


>gi|307704819|ref|ZP_07641714.1| ribonucleoside-diphosphate reductase 2 subunit beta [Streptococcus
           mitis SK597]
 gi|307708708|ref|ZP_07645171.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           mitis NCTC 12261]
 gi|307709353|ref|ZP_07645811.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           mitis SK564]
 gi|307615282|gb|EFN94492.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           mitis NCTC 12261]
 gi|307619936|gb|EFN99054.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           mitis SK564]
 gi|307621648|gb|EFO00690.1| ribonucleoside-diphosphate reductase 2 subunit beta [Streptococcus
           mitis SK597]
          Length = 320

 Score = 34.7 bits (78), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 21/97 (21%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V
Sbjct: 21  TWEK---LTEQFWLDTRIPLSNDLDDWRK---LSNVEKDLVGKVFGGLTLLDTMQSETGV 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            A+   +  P          F E+VH+ ++  I ++L
Sbjct: 75  QALRADIRTPHEEAVFNNIQFMESVHAKSYSSIFSTL 111


>gi|269217712|ref|ZP_06161566.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces sp.
           oral taxon 848 str. F0332]
 gi|269212647|gb|EEZ78987.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces sp.
           oral taxon 848 str. F0332]
          Length = 325

 Score = 34.7 bits (78), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 5/118 (4%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P ++P+ +D+  W +   L   E+ M  R        +++      +++     
Sbjct: 33  TGNFWLPEKIPLSNDIPSWST---LKPHEQQMTTRVFTGLTLLDTVQGTVGAVSLIPDAV 89

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQY 165
            P     L   AF E+VH+ ++  I ++L   E   E F    E   +  KA   L Y
Sbjct: 90  TPHEEAVLTNIAFMESVHAKSYSSIFSTLISTEEIDETFRWSEENEYLQKKAKIILDY 147


>gi|261343568|ref|ZP_05971213.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rustigianii DSM 4541]
 gi|282568717|gb|EFB74252.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rustigianii DSM 4541]
          Length = 323

 Score = 34.7 bits (78), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 11/119 (9%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR---NLGFFASSESLVANNIVLAIYRHL 108
           N W+P +VP+ +D+  W   N LT  E+ +  R    L    + ++ V    ++A     
Sbjct: 33  NFWLPEKVPLSNDINSW---NTLTATEKKLTIRVFTGLTLLDTIQNTVGAPCLMA---DA 86

Query: 109 SNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANWALQY 165
             P     L   +F EAVH+ ++  I ++L    D  E +    E  ++  KA   L Y
Sbjct: 87  QTPHEEAVLSNISFMEAVHARSYSSIFSTLCSTPDVDEAYRWSEENSALQNKAKIILSY 145


>gi|253989035|ref|YP_003040391.1| ribonucleotide-diphosphate reductase subunit beta [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|211638141|emb|CAR66767.1| ribonucleoside-diphosphate reductase 1 beta chain (ribonucleotid
           reductase 1) (b2 protein) (r2 protein) [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253780485|emb|CAQ83647.1| ribonucleoside-diphosphate reductase 1 beta chain (ribonucleotid
           reductase 1) (b2 protein) (r2 protein) [Photorhabdus
           asymbiotica]
          Length = 376

 Score = 34.7 bits (78), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 3/94 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   N L D E+ +   NL +    +S+   +  +A    +S PE 
Sbjct: 49  WRPEEVDVSRDRIDY---NALPDHEKHIFISNLKYQTLLDSIQGRSPNVAFLPLISIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFN 147
             ++   +F E +HS ++ +II ++  D   +F+
Sbjct: 106 ETWVETWSFSETIHSRSYTHIIRNIVNDPAVVFD 139


>gi|4389291|pdb|1BIQ|A Chain A, Ribonucleoside-Diphosphate Reductase 1 Beta Chain Mutant
           E238a
          Length = 375

 Score = 34.7 bits (78), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 24/94 (25%), Positives = 47/94 (50%), Gaps = 3/94 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +++   L + E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 48  WRPEEVDVSRDRIDYQA---LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPEL 104

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFN 147
             ++   AF E +HS +F +II ++  D   +F+
Sbjct: 105 ETWVETWAFSETIHSRSFTHIIRNIVNDPSVVFD 138


>gi|307944765|ref|ZP_07660103.1| ribonucleoside-diphosphate reductase, beta subunit [Roseibium sp.
           TrichSKD4]
 gi|307771979|gb|EFO31202.1| ribonucleoside-diphosphate reductase, beta subunit [Roseibium sp.
           TrichSKD4]
          Length = 329

 Score = 34.7 bits (78), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 9/125 (7%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIK--RNLGFFASSESLVANNIVLAIYRHLS 109
           N W+P +VP+ +D+  W + +   D+++L I+    L    + ++ V    ++       
Sbjct: 38  NFWLPEKVPLSNDIQSWATLH--PDEQQLTIRVFTGLTLLDTIQNTVGAPTLMP---DAL 92

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANWALQYTQ 167
            P     L   AF EAVH+ ++  + ++L    D  E F    E   + AK+   L    
Sbjct: 93  TPHEEAVLTNIAFMEAVHARSYSSVFSTLCQTADVDEAFRWSEENEHLQAKSRLILDEYG 152

Query: 168 TLSSP 172
              SP
Sbjct: 153 AAGSP 157


>gi|290508492|ref|ZP_06547863.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella sp.
           1_1_55]
 gi|289777886|gb|EFD85883.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella sp.
           1_1_55]
          Length = 405

 Score = 34.7 bits (78), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 4/125 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +++   L + E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 78  WRPEEVDVSRDRIDYQA---LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPEL 134

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
             ++   AF E +HS ++ +II ++  D   +F+       I  +A     Y  +L   +
Sbjct: 135 ETWVETWAFSETIHSRSYTHIIRNIVNDPATVFDDIVTNEQIQKRAEGISHYYDSLIEMT 194

Query: 174 FHYWN 178
             YW+
Sbjct: 195 -SYWH 198


>gi|213965886|ref|ZP_03394077.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           amycolatum SK46]
 gi|213951464|gb|EEB62855.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           amycolatum SK46]
          Length = 338

 Score = 34.7 bits (78), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 3/90 (3%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +D+  W + N L     + +   L    + +  V     +++     
Sbjct: 46  TGNFWLPEKVPLSNDIKSWNTLNALEQRTTMRVFTGLTMLDTIQGTVG---AVSLIPDAL 102

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
            P         AF E+VH+ ++  I  +L 
Sbjct: 103 TPHEEAVYTNIAFMESVHAKSYSSIFQTLA 132


>gi|288933942|ref|YP_003438001.1| ribonucleoside-diphosphate reductase [Klebsiella variicola At-22]
 gi|290510980|ref|ZP_06550349.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           1_1_55]
 gi|288888671|gb|ADC56989.1| Ribonucleoside-diphosphate reductase [Klebsiella variicola At-22]
 gi|289775973|gb|EFD83972.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           1_1_55]
          Length = 320

 Score = 34.7 bits (78), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 3/88 (3%)

Query: 51  NNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSN 110
           +N W+P +VP+ +D+  W++ +       + +   L    + ++ V    ++A       
Sbjct: 29  SNFWLPEKVPLSNDIPAWQTLSAAEQQLTIRVFTGLTLLDTIQNTVGAPALMA---DALT 85

Query: 111 PECRQYLLRQAFEEAVHSHTFQYIITSL 138
           P     L   +F EAVH+ ++  I ++L
Sbjct: 86  PHEEAVLSNISFMEAVHARSYSSIFSTL 113


>gi|269139684|ref|YP_003296385.1| ribonucleotide reductase, beta subunit [Edwardsiella tarda EIB202]
 gi|267985345|gb|ACY85174.1| ribonucleotide reductase, beta subunit [Edwardsiella tarda EIB202]
 gi|304559553|gb|ADM42217.1| Ribonucleotide reductase of class Ia, beta subunit [Edwardsiella
           tarda FL6-60]
          Length = 376

 Score = 34.7 bits (78), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 23/94 (24%), Positives = 47/94 (50%), Gaps = 3/94 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +++   L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSRDRIDYQA---LPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFN 147
             ++   +F E +HS ++ +II ++  D   +F+
Sbjct: 106 ETWVETWSFSETIHSRSYTHIIRNIVTDPALVFD 139


>gi|238794433|ref|ZP_04638043.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           intermedia ATCC 29909]
 gi|238726228|gb|EEQ17772.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           intermedia ATCC 29909]
          Length = 330

 Score = 34.7 bits (78), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 32/147 (21%), Positives = 61/147 (41%), Gaps = 19/147 (12%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           N W+P +VP+ +D+  W +   LT +E+ +  R        +++       A+ +    P
Sbjct: 40  NFWLPEKVPLSNDIPSWAT---LTPNEQQLTIRVFTGLTLLDTIQNTLGAPALIKDAITP 96

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYREVPSITAKANWALQYTQTL 169
                    +F EAVH+ ++  I ++L +  D  + +    E   +  KA+  LQ     
Sbjct: 97  HEEAVFSNISFMEAVHARSYSSIFSTLCMTSDVDDAYRWSEENGPLQKKADIILQ----- 151

Query: 170 SSPSFHYWN----KRRRSRILTRSLRF 192
                HY N    K++ + +   S  F
Sbjct: 152 -----HYHNDDPLKKKIASVFLESFLF 173


>gi|310722637|ref|YP_003969460.1| NrdB aerobic NDP reductase small subunit [Aeromonas phage phiAS5]
 gi|306021480|gb|ADM80014.1| NrdB aerobic NDP reductase small subunit [Aeromonas phage phiAS5]
          Length = 376

 Score = 34.7 bits (78), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 26/116 (22%), Positives = 54/116 (46%), Gaps = 3/116 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D+  +   + LT+ E+ +  +NL + +  +S+      L     +S+   
Sbjct: 48  WRPEEVDLSKDMIDF---SRLTEAEQYVFTQNLKYQSLLDSVQGRAPNLTFLPMVSDIAL 104

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
             ++   +F E +HS ++ +I+ +L ++  E+F+       I  +A    QY   L
Sbjct: 105 ETWITTWSFSETIHSRSYTHIMRNLYVNPTEVFDRIMLDEKIMKRATAVTQYYDDL 160


>gi|296111477|ref|YP_003621859.1| ribonucleotide-diphosphate reductase beta subunit [Leuconostoc
           kimchii IMSNU 11154]
 gi|295833009|gb|ADG40890.1| ribonucleotide-diphosphate reductase beta subunit [Leuconostoc
           kimchii IMSNU 11154]
          Length = 325

 Score = 34.7 bits (78), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 15/126 (11%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W+    ++D ER  +    G   + ++L + + +
Sbjct: 25  TWEK---LTQQFWLDTRIPISNDLKNWRGN--MSDQERQTMNLVFGGLTTLDTLQSQDGM 79

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSIT--AKA 159
             +   + N +    L    F E+VH+ ++  I  +L        N   E+ +I   A  
Sbjct: 80  AQLKLDVVNQKEEAVLNNIQFMESVHAKSYSSIFETL--------NEKSEIEAIFDWADT 131

Query: 160 NWALQY 165
           N  LQY
Sbjct: 132 NEFLQY 137


>gi|227358546|ref|ZP_03842871.1| ribonucleoside-diphosphate reductase beta chain [Proteus mirabilis
           ATCC 29906]
 gi|227161257|gb|EEI46331.1| ribonucleoside-diphosphate reductase beta chain [Proteus mirabilis
           ATCC 29906]
          Length = 337

 Score = 34.7 bits (78), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 11/143 (7%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           N W+P ++P+ +D+  W   N LT  E+ +  R        +++        +      P
Sbjct: 47  NFWLPEKIPLSNDIPSW---NTLTQAEKQLTIRVFTGLTLLDTIQNTVGAPTLMPDAQTP 103

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYREVPSITAKANWALQYTQTL 169
                L    F EAVH+ ++  I ++L L  D  + +    E   +  K++  L+Y Q  
Sbjct: 104 HEEAVLSNICFMEAVHARSYSSIFSTLCLTTDVDDAYRWSEENTYLQKKSDIILRYYQD- 162

Query: 170 SSPSFHYWNKRRRSRILTRSLRF 192
           S P      K++ + +   S  F
Sbjct: 163 SDPL-----KKKIASVFLESFLF 180


>gi|330013348|ref|ZP_08307619.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           MS 92-3]
 gi|328533536|gb|EGF60259.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           MS 92-3]
          Length = 320

 Score = 34.7 bits (78), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 3/88 (3%)

Query: 51  NNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSN 110
           +N W+P +VP+ +D+  W++ +       + +   L    + ++ V    ++A       
Sbjct: 29  SNFWLPEKVPLSNDIPAWQTLSAAEQQLTIRVFTGLTLLDTIQNTVGAPALMA---DALT 85

Query: 111 PECRQYLLRQAFEEAVHSHTFQYIITSL 138
           P     L   +F EAVH+ ++  I ++L
Sbjct: 86  PHEEAVLSNISFMEAVHARSYSSIFSTL 113


>gi|317048919|ref|YP_004116567.1| ribonucleoside-diphosphate reductase [Pantoea sp. At-9b]
 gi|316950536|gb|ADU70011.1| Ribonucleoside-diphosphate reductase [Pantoea sp. At-9b]
          Length = 376

 Score = 34.7 bits (78), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 59/125 (47%), Gaps = 4/125 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +++   L + E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSRDRIDYQA---LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
             ++   AF E +HS ++ +II ++  D   +F+       I A+A    +Y   L   +
Sbjct: 106 ETWIETWAFSETIHSRSYTHIIRNIVNDPSLVFDDIVTNEQILARAQDISKYYDDLIEMT 165

Query: 174 FHYWN 178
            +YW+
Sbjct: 166 -NYWH 169


>gi|153820502|ref|ZP_01973169.1| ribonucleoside-diphosphate reductase 1 subunit beta [Vibrio
           cholerae NCTC 8457]
 gi|126508955|gb|EAZ71549.1| ribonucleoside-diphosphate reductase 1 subunit beta [Vibrio
           cholerae NCTC 8457]
          Length = 155

 Score = 34.7 bits (78), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 3/106 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +     L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSSDRIDY---GKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKA 159
             ++   +F E +HS ++ +II ++  D   +F+   E   I  +A
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIVNDPAVVFDDIVENEHIIKRA 151


>gi|40889712|pdb|1RSR|A Chain A, Azide Complex Of The Diferrous F208a Mutant R2 Subunit Of
           Ribonucleotide Reductase
 gi|40889713|pdb|1RSR|B Chain B, Azide Complex Of The Diferrous F208a Mutant R2 Subunit Of
           Ribonucleotide Reductase
          Length = 375

 Score = 34.7 bits (78), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 24/94 (25%), Positives = 47/94 (50%), Gaps = 3/94 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +++   L + E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 48  WRPEEVDVSRDRIDYQA---LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPEL 104

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFN 147
             ++   AF E +HS +F +II ++  D   +F+
Sbjct: 105 ETWVETWAFSETIHSRSFTHIIRNIVNDPSVVFD 138


>gi|188533084|ref|YP_001906881.1| Ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia
           tasmaniensis Et1/99]
 gi|188028126|emb|CAO95983.1| Ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia
           tasmaniensis Et1/99]
          Length = 319

 Score = 34.7 bits (78), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 64/150 (42%), Gaps = 21/150 (14%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNI-VLAIYRHL 108
            +N W+P +VP+ +D+  W S N   ++++L I+   G   +    + N +   A+    
Sbjct: 27  TSNFWLPEKVPLSNDIPAWNSLNA--EEQQLTIRVFTGL--TLLDTIQNTLGAPALMADA 82

Query: 109 SNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANWALQYT 166
             P     +   +F EAVH+ ++  I ++L    D    +    E   + AKA   LQ  
Sbjct: 83  LTPHEEAVMSNISFMEAVHARSYSSIFSTLCHTSDVDAAYAWSEENAPLQAKAQIILQ-- 140

Query: 167 QTLSSPSFHYWN----KRRRSRILTRSLRF 192
                   HY++    K++ + +   S  F
Sbjct: 141 --------HYYHDDALKKKIASVFLESFLF 162


>gi|4389292|pdb|1BIQ|B Chain B, Ribonucleoside-Diphosphate Reductase 1 Beta Chain Mutant
           E238a
 gi|40889714|pdb|1RSV|A Chain A, Azide Complex Of The Diferrous E238a Mutant R2 Subunit Of
           Ribonucleotide Reductase
 gi|40889715|pdb|1RSV|B Chain B, Azide Complex Of The Diferrous E238a Mutant R2 Subunit Of
           Ribonucleotide Reductase
          Length = 375

 Score = 34.7 bits (78), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 24/94 (25%), Positives = 47/94 (50%), Gaps = 3/94 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +++   L + E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 48  WRPEEVDVSRDRIDYQA---LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPEL 104

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFN 147
             ++   AF E +HS +F +II ++  D   +F+
Sbjct: 105 ETWVETWAFSETIHSRSFTHIIRNIVNDPSVVFD 138


>gi|113970253|ref|YP_734046.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella sp.
           MR-4]
 gi|114047558|ref|YP_738108.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella sp.
           MR-7]
 gi|113884937|gb|ABI38989.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella sp. MR-4]
 gi|113889000|gb|ABI43051.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella sp. MR-7]
          Length = 376

 Score = 34.7 bits (78), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 3/94 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   N L D E+ +   NL +    +S+   +  +A    +S PE 
Sbjct: 49  WRPEEVDVSRDKIDY---NSLPDHEKHIFISNLKYQTLLDSIQGRSPNVAFLPLVSLPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFN 147
             ++   +F E +HS ++ +II ++  D   +F+
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIVNDPSVIFD 139


>gi|313668429|ref|YP_004048713.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
           lactamica ST-640]
 gi|313005891|emb|CBN87347.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
           lactamica 020-06]
          Length = 377

 Score = 34.7 bits (78), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 3/106 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P E+ +  D   + +   L + E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKA 159
             ++   +F E +HS ++ +II ++  D   +F+   E   ITA+A
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITARA 151


>gi|251781888|ref|YP_002996190.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
 gi|242390517|dbj|BAH80976.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
 gi|323126699|gb|ADX23996.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           dysgalactiae subsp. equisimilis ATCC 12394]
          Length = 337

 Score = 34.7 bits (78), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 3/90 (3%)

Query: 49  ACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHL 108
              N W+P +VP+ +DL  W+S   L +D + +I R        +++ A    +A  +H 
Sbjct: 44  VTQNFWLPEKVPVSNDLTSWRS---LGEDWQQLITRTYTGLTLLDTVQATVGDVAQIQHS 100

Query: 109 SNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
                +      AF  A+H+ ++  I ++L
Sbjct: 101 QTDHEQVIYTNFAFMVAIHARSYGTIFSTL 130


>gi|152971534|ref|YP_001336643.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|150956383|gb|ABR78413.1| ribonucleotide-diphosphate reductase beta subunit [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
          Length = 320

 Score = 34.7 bits (78), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 3/88 (3%)

Query: 51  NNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSN 110
           +N W+P +VP+ +D+  W++ +       + +   L    + ++ V    ++A       
Sbjct: 29  SNFWLPEKVPLSNDIPAWQTLSAAEQQLTIRVFTGLTLLDTIQNTVGAPALMA---DALT 85

Query: 111 PECRQYLLRQAFEEAVHSHTFQYIITSL 138
           P     L   +F EAVH+ ++  I ++L
Sbjct: 86  PHEEAVLSNISFMEAVHARSYSSIFSTL 113


>gi|322832009|ref|YP_004212036.1| Ribonucleoside-diphosphate reductase [Rahnella sp. Y9602]
 gi|321167210|gb|ADW72909.1| Ribonucleoside-diphosphate reductase [Rahnella sp. Y9602]
          Length = 376

 Score = 34.3 bits (77), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 3/123 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P E+ +  D   +++   L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEIDVSRDRIDFQA---LPDHEKHIFLSNLKYQTLLDSIQGRSPNVALLPLISIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
             ++   AF E +HS ++ +II ++  D   +F+       I  +A     Y  TL   +
Sbjct: 106 ETWVETWAFSETIHSRSYTHIIRNIVNDPAIVFDDIVTNEEILKRAKDISGYYDTLIEMT 165

Query: 174 FHY 176
            +Y
Sbjct: 166 SYY 168


>gi|33358114|pdb|1PIM|A Chain A, Dithionite Reduced E. Coli Ribonucleotide Reductase R2
           Subunit, D84e Mutant
 gi|33358115|pdb|1PIM|B Chain B, Dithionite Reduced E. Coli Ribonucleotide Reductase R2
           Subunit, D84e Mutant
 gi|33358116|pdb|1PIU|A Chain A, Oxidized Ribonucleotide Reductase R2-D84e Mutant
           Containing Oxo-Bridged Diferric Cluster
 gi|33358117|pdb|1PIU|B Chain B, Oxidized Ribonucleotide Reductase R2-D84e Mutant
           Containing Oxo-Bridged Diferric Cluster
 gi|42543285|pdb|1PIZ|A Chain A, Ribonucleotide Reductase R2 D84e Mutant Soaked With
           Ferrous Ions At Neutral Ph
 gi|42543286|pdb|1PIZ|B Chain B, Ribonucleotide Reductase R2 D84e Mutant Soaked With
           Ferrous Ions At Neutral Ph
          Length = 375

 Score = 34.3 bits (77), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 24/94 (25%), Positives = 47/94 (50%), Gaps = 3/94 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +++   L + E+ +   NL +    ES+   +  +A+   +S PE 
Sbjct: 48  WRPEEVDVSRDRIDYQA---LPEHEKHIFISNLKYQTLLESIQGRSPNVALLPLISIPEL 104

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFN 147
             ++   AF E +HS ++ +II ++  D   +F+
Sbjct: 105 ETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFD 138


>gi|297250515|ref|ZP_06864465.2| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           polysaccharea ATCC 43768]
 gi|296838835|gb|EFH22773.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           polysaccharea ATCC 43768]
          Length = 377

 Score = 34.3 bits (77), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 3/106 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P E+ +  D   + +   L + E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKA 159
             ++   +F E +HS ++ +II ++  D   +F+   E   ITA+A
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITARA 151


>gi|238895770|ref|YP_002920506.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella
           pneumoniae NTUH-K2044]
 gi|238548088|dbj|BAH64439.1| ribonucleotide-diphosphate reductase beta subunit [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 396

 Score = 34.3 bits (77), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 4/125 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +++   L + E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 69  WRPEEVDVSRDRIDYQA---LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPEL 125

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
             ++   AF E +HS ++ +II ++  D   +F+       I  +A     Y  +L   +
Sbjct: 126 ETWVETWAFSETIHSRSYTHIIRNIVNDPATVFDDIVTNEQIQKRAEGISHYYDSLIEMT 185

Query: 174 FHYWN 178
             YW+
Sbjct: 186 -SYWH 189


>gi|161353784|ref|NP_274308.2| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           meningitidis MC58]
 gi|304387414|ref|ZP_07369605.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           meningitidis ATCC 13091]
 gi|304338507|gb|EFM04626.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           meningitidis ATCC 13091]
 gi|316984078|gb|EFV63056.1| ribonucleoside-diphosphate reductase 1 subunit beta [Neisseria
           meningitidis H44/76]
 gi|325134468|gb|EGC57113.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M13399]
 gi|325140485|gb|EGC63006.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis CU385]
 gi|325144569|gb|EGC66868.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M01-240013]
 gi|325200084|gb|ADY95539.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis H44/76]
 gi|325204292|gb|ADY99745.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M01-240355]
 gi|325205936|gb|ADZ01389.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M04-240196]
          Length = 377

 Score = 34.3 bits (77), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 3/106 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P E+ +  D   + +   L + E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKA 159
             ++   +F E +HS ++ +II ++  D   +F+   E   ITA+A
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITARA 151


>gi|152997008|ref|YP_001341843.1| ribonucleotide-diphosphate reductase subunit beta [Marinomonas sp.
           MWYL1]
 gi|150837932|gb|ABR71908.1| Ribonucleoside-diphosphate reductase [Marinomonas sp. MWYL1]
          Length = 377

 Score = 34.3 bits (77), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 27/112 (24%), Positives = 53/112 (47%), Gaps = 3/112 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D    K    L + E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDLSTDR---KDFQRLEEHEQHIFLSNLKYQTLLDSVQGRSPNVALLPIVSLPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQY 165
             ++   +F E +HS ++ +II ++  D  ++F+       IT +A+   +Y
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIVNDPTKIFDDIVTNEEITKRADSVSKY 157


>gi|325063539|gb|ADY67229.1| transcriptional regulator, AraC family [Agrobacterium sp. H13-3]
          Length = 346

 Score = 34.3 bits (77), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 16/45 (35%), Positives = 25/45 (55%)

Query: 59  VPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           VP +D +ALW+    +  D RL   ++ GFFAS ++    N+ L 
Sbjct: 20  VPKRDAMALWRDSINVLFDARLRRSQDDGFFASVDAAFIGNVALG 64


>gi|254672337|emb|CBA05511.1| ribonucleoside-diphosphate reductase beta chain [Neisseria
           meningitidis alpha275]
          Length = 345

 Score = 34.3 bits (77), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 3/106 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P E+ +  D   + +   L + E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 56  WRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPEL 112

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKA 159
             ++   +F E +HS ++ +II ++  D   +F+   E   ITA+A
Sbjct: 113 ETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITARA 158


>gi|218768312|ref|YP_002342824.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           meningitidis Z2491]
 gi|121052320|emb|CAM08650.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
           meningitidis Z2491]
 gi|261392428|emb|CAX49973.1| ribonucleoside-diphosphate reductase beta subunit (ribonucleotide
           reductase) [Neisseria meningitidis 8013]
          Length = 377

 Score = 34.3 bits (77), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 3/106 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P E+ +  D   + +   L + E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKA 159
             ++   +F E +HS ++ +II ++  D   +F+   E   ITA+A
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITARA 151


>gi|262171721|ref|ZP_06039399.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           mimicus MB-451]
 gi|261892797|gb|EEY38783.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           mimicus MB-451]
          Length = 377

 Score = 34.3 bits (77), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 3/116 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +     L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSSDRIDY---GKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
             ++   +F E +HS ++ +II ++  D   +F+   E   I  +A     Y   L
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIVNDPAVVFDDIVENEHIIKRAKDIAHYYDDL 161


>gi|238920521|ref|YP_002934036.1| ribonucleotide-diphosphate reductase subunit beta [Edwardsiella
           ictaluri 93-146]
 gi|238870090|gb|ACR69801.1| ribonucleoside-diphosphate reductase, beta subunit, putative
           [Edwardsiella ictaluri 93-146]
          Length = 376

 Score = 34.3 bits (77), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 23/94 (24%), Positives = 47/94 (50%), Gaps = 3/94 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +++   L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSRDRIDYQA---LPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFN 147
             ++   +F E +HS ++ +II ++  D   +F+
Sbjct: 106 ETWVETWSFSETIHSRSYTHIIRNIVTDPSLVFD 139


>gi|238759171|ref|ZP_04620339.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia aldovae
           ATCC 35236]
 gi|238702587|gb|EEP95136.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia aldovae
           ATCC 35236]
          Length = 323

 Score = 34.3 bits (77), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 25/118 (21%), Positives = 53/118 (44%), Gaps = 5/118 (4%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
            +N W+P ++P+ +D+  W +   LT +E+ +  R        +++       A+ +   
Sbjct: 31  TSNFWLPEKIPLSNDIPSWAT---LTPNEQQLTIRVFTGLTLLDTIQNTLGAPALIKDAI 87

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYREVPSITAKANWALQY 165
            P         +F EAVH+ ++  I ++L +  D  + +    E   +  KA+  LQ+
Sbjct: 88  TPHEEAVFSNISFMEAVHARSYSSIFSTLCMTSDVDDAYRWSEENGPLQKKADIILQH 145


>gi|238762669|ref|ZP_04623638.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           kristensenii ATCC 33638]
 gi|238698974|gb|EEP91722.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           kristensenii ATCC 33638]
          Length = 323

 Score = 34.3 bits (77), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 5/116 (4%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           N W+P +VP+ +D+  W     LT +E+ +  R        +++       A+ +    P
Sbjct: 33  NFWLPEKVPLSNDIPSWAK---LTAEEQQLTIRVFTGLTLLDTIQNTLGAPALIKDAITP 89

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANWALQY 165
                    +F EAVH+ ++  I ++L    D  E +    E  ++  KAN  L++
Sbjct: 90  HEEAVFSNISFMEAVHARSYSSIFSTLCSTPDVDEAYRWSEENIALQKKANIILEH 145


>gi|194895613|ref|XP_001978297.1| GG19514 [Drosophila erecta]
 gi|190649946|gb|EDV47224.1| GG19514 [Drosophila erecta]
          Length = 1882

 Score = 34.3 bits (77), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 15/35 (42%), Positives = 22/35 (62%)

Query: 144  ELFNMYREVPSITAKANWALQYTQTLSSPSFHYWN 178
            EL   YR+VPS  A+ +W  QY  ++++ S  YWN
Sbjct: 1759 ELEKKYRKVPSEDAEPHWTEQYDASVNTCSHAYWN 1793


>gi|121635003|ref|YP_975248.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           meningitidis FAM18]
 gi|120866709|emb|CAM10461.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
           meningitidis FAM18]
 gi|325128288|gb|EGC51172.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis N1568]
 gi|325130346|gb|EGC53112.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis OX99.30304]
 gi|325132508|gb|EGC55201.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M6190]
 gi|325136206|gb|EGC58814.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M0579]
 gi|325138282|gb|EGC60851.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis ES14902]
 gi|325142424|gb|EGC64828.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis 961-5945]
 gi|325198443|gb|ADY93899.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis G2136]
 gi|325201998|gb|ADY97452.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M01-240149]
          Length = 377

 Score = 34.3 bits (77), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 3/106 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P E+ +  D   + +   L + E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKA 159
             ++   +F E +HS ++ +II ++  D   +F+   E   ITA+A
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITARA 151


>gi|7226528|gb|AAF41664.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis MC58]
 gi|254670476|emb|CBA06168.1| ribonucleoside-diphosphate reductase beta chain [Neisseria
           meningitidis alpha153]
          Length = 384

 Score = 34.3 bits (77), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 3/106 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P E+ +  D   + +   L + E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 56  WRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPEL 112

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKA 159
             ++   +F E +HS ++ +II ++  D   +F+   E   ITA+A
Sbjct: 113 ETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITARA 158


>gi|258624428|ref|ZP_05719375.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio mimicus
           VM603]
 gi|258583275|gb|EEW08077.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio mimicus
           VM603]
          Length = 381

 Score = 34.3 bits (77), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 3/116 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +     L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 53  WRPEEVDVSSDRIDY---GKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPEL 109

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
             ++   +F E +HS ++ +II ++  D   +F+   E   I  +A     Y   L
Sbjct: 110 ETWIETWSFSETIHSRSYTHIIRNIVNDPAVVFDDIVENEHIIKRAKDIAHYYDDL 165


>gi|319410557|emb|CBY90925.1| ribonucleoside-diphosphate reductase beta subunit (ribonucleotide
           reductase) [Neisseria meningitidis WUE 2594]
 gi|325208250|gb|ADZ03702.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis NZ-05/33]
          Length = 384

 Score = 34.3 bits (77), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 3/106 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P E+ +  D   + +   L + E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 56  WRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPEL 112

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKA 159
             ++   +F E +HS ++ +II ++  D   +F+   E   ITA+A
Sbjct: 113 ETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITARA 158


>gi|254805092|ref|YP_003083313.1| ribonucleoside-diphosphate reductase beta chain [Neisseria
           meningitidis alpha14]
 gi|254668634|emb|CBA06257.1| ribonucleoside-diphosphate reductase beta chain [Neisseria
           meningitidis alpha14]
          Length = 384

 Score = 34.3 bits (77), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 3/106 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P E+ +  D   + +   L + E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 56  WRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPEL 112

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKA 159
             ++   +F E +HS ++ +II ++  D   +F+   E   ITA+A
Sbjct: 113 ETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITARA 158


>gi|262165506|ref|ZP_06033243.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           mimicus VM223]
 gi|262025222|gb|EEY43890.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           mimicus VM223]
          Length = 377

 Score = 34.3 bits (77), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 3/116 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +     L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSSDRIDY---GKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
             ++   +F E +HS ++ +II ++  D   +F+   E   I  +A     Y   L
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIVNDPAVVFDDIVENEHIIKRAKDIAHYYDDL 161


>gi|152971181|ref|YP_001336290.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|206577425|ref|YP_002237361.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella
           pneumoniae 342]
 gi|262043285|ref|ZP_06016416.1| ribonucleoside-diphosphate reductase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|288934289|ref|YP_003438348.1| ribonucleotide reductase [Klebsiella variicola At-22]
 gi|330000612|ref|ZP_08303755.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           MS 92-3]
 gi|150956030|gb|ABR78060.1| ribonucleotide-diphosphate reductase beta subunit [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|206566483|gb|ACI08259.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella
           pneumoniae 342]
 gi|259039384|gb|EEW40524.1| ribonucleoside-diphosphate reductase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|288889018|gb|ADC57336.1| ribonucleotide reductase [Klebsiella variicola At-22]
 gi|328537954|gb|EGF64133.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           MS 92-3]
          Length = 376

 Score = 34.3 bits (77), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 4/125 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +++   L + E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSRDRIDYQA---LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
             ++   AF E +HS ++ +II ++  D   +F+       I  +A     Y  +L   +
Sbjct: 106 ETWVETWAFSETIHSRSYTHIIRNIVNDPATVFDDIVTNEQIQKRAEGISHYYDSLIEMT 165

Query: 174 FHYWN 178
             YW+
Sbjct: 166 -SYWH 169


>gi|258620211|ref|ZP_05715250.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio mimicus
           VM573]
 gi|258587569|gb|EEW12279.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio mimicus
           VM573]
          Length = 381

 Score = 34.3 bits (77), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 3/116 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +     L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 53  WRPEEVDVSSDRIDY---GKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPEL 109

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
             ++   +F E +HS ++ +II ++  D   +F+   E   I  +A     Y   L
Sbjct: 110 ETWIETWSFSETIHSRSYTHIIRNIVNDPAVVFDDIVENEHIIKRAKDIAHYYDDL 165


>gi|161870162|ref|YP_001599332.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           meningitidis 053442]
 gi|161595715|gb|ABX73375.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
           meningitidis 053442]
          Length = 384

 Score = 34.3 bits (77), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 3/106 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P E+ +  D   + +   L + E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 56  WRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPEL 112

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKA 159
             ++   +F E +HS ++ +II ++  D   +F+   E   ITA+A
Sbjct: 113 ETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITARA 158


>gi|308389409|gb|ADO31729.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
           meningitidis alpha710]
          Length = 384

 Score = 34.3 bits (77), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 3/106 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P E+ +  D   + +   L + E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 56  WRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPEL 112

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKA 159
             ++   +F E +HS ++ +II ++  D   +F+   E   ITA+A
Sbjct: 113 ETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITARA 158


>gi|262043918|ref|ZP_06017006.1| ribonucleoside-diphosphate reductase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259038772|gb|EEW39955.1| ribonucleoside-diphosphate reductase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 320

 Score = 34.3 bits (77), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 3/88 (3%)

Query: 51  NNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSN 110
           +N W+P +VP+ +D+  W++ +       + +   L    + ++ V    ++A       
Sbjct: 29  SNFWLPEKVPLSNDIPAWQTLSAAEQQLTIRVFTELTLLDTIQNTVGAPALMA---DALT 85

Query: 111 PECRQYLLRQAFEEAVHSHTFQYIITSL 138
           P     L   +F EAVH+ ++  I ++L
Sbjct: 86  PHEEAVLSNISFMEAVHARSYSSIFSTL 113


>gi|261400675|ref|ZP_05986800.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           lactamica ATCC 23970]
 gi|269209585|gb|EEZ76040.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           lactamica ATCC 23970]
          Length = 377

 Score = 34.3 bits (77), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 3/106 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P E+ +  D   + +   L + E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKA 159
             ++   +F E +HS ++ +II ++  D   +F+   E   ITA+A
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITARA 151


>gi|319957101|ref|YP_004168364.1| ribonucleoside-diphosphate reductase [Nitratifractor salsuginis DSM
           16511]
 gi|319419505|gb|ADV46615.1| Ribonucleoside-diphosphate reductase [Nitratifractor salsuginis DSM
           16511]
          Length = 337

 Score = 34.3 bits (77), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 59/122 (48%), Gaps = 7/122 (5%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           +Y W+   Y     N W P+EV   ++    K  + LTD+E+ + K      + ++S  A
Sbjct: 34  RYKWSVNLYDLMNANTWFPSEVNTANE---KKHFDLLTDNEQAIYKLTFAQLSFNDS--A 88

Query: 98  NNIVLAIYRHLSNPE-CRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSIT 156
               L+ +R L+N    +  L  Q  +E  HS ++  ++ + G +  E+F++Y+   ++ 
Sbjct: 89  QEEYLSDFRRLANNRLVKAALSLQIMQEVNHSKSYAVLLDAAG-NSDEVFDLYKHDAALN 147

Query: 157 AK 158
            K
Sbjct: 148 RK 149


>gi|309379219|emb|CBX22176.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 384

 Score = 34.3 bits (77), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 3/106 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P E+ +  D   + +   L + E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 56  WRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPEL 112

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKA 159
             ++   +F E +HS ++ +II ++  D   +F+   E   ITA+A
Sbjct: 113 ETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITARA 158


>gi|157148214|ref|YP_001455533.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter
           koseri ATCC BAA-895]
 gi|157085419|gb|ABV15097.1| hypothetical protein CKO_04025 [Citrobacter koseri ATCC BAA-895]
          Length = 319

 Score = 34.3 bits (77), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 18/89 (20%), Positives = 41/89 (46%), Gaps = 3/89 (3%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
            +N W+P +VP+ +D+  W++ +       + +   L    + +++       A+ +   
Sbjct: 27  TSNFWLPEKVPLSNDIPAWQTLSAAEQQLTIRVFTGLTLLDTIQNIAG---APALMQDAL 83

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            P     L   +F EAVH+ ++  I ++L
Sbjct: 84  TPHEEAVLSNISFMEAVHARSYSSIFSTL 112


>gi|225021562|ref|ZP_03710754.1| hypothetical protein CORMATOL_01583 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224945553|gb|EEG26762.1| hypothetical protein CORMATOL_01583 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 330

 Score = 34.3 bits (77), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 49/120 (40%), Gaps = 9/120 (7%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL--AIYRH 107
             N W+P +VP+ +DL  W + N L     + +   L    + +  V    +L  A+  H
Sbjct: 38  TGNFWLPEKVPVSNDLKSWSTLNDLEKQTTMRVFTGLTLLDTIQGTVGAVSMLPDAVTLH 97

Query: 108 LSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQY 165
                    L   AF E+VH+ ++  I  +L   +   E F    E  ++  KA   L Y
Sbjct: 98  -----EEAVLTNIAFMESVHAKSYSNIFMTLASTKEINEAFRWSEENENLQKKAKIILTY 152


>gi|24373963|ref|NP_718006.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           oneidensis MR-1]
 gi|24348405|gb|AAN55450.1|AE015682_5 ribonucleoside-diphosphate reductase, beta subunit [Shewanella
           oneidensis MR-1]
          Length = 376

 Score = 34.3 bits (77), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 3/94 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   N L D E+ +   NL +    +S+   +  +A    +S PE 
Sbjct: 49  WRPEEVDVSRDKIDY---NSLPDHEKHIFISNLKYQTLLDSIQGRSPNVAFLPLVSLPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFN 147
             ++   +F E +HS ++ +II ++  D   +F+
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIVNDPSVIFD 139


>gi|15827930|ref|NP_302193.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           leprae TN]
 gi|221230407|ref|YP_002503823.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           leprae Br4923]
 gi|14195114|sp|Q9CBQ2|RIR2_MYCLE RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|13093483|emb|CAC30684.1| ribonucleotide reductase small subunit [Mycobacterium leprae]
 gi|219933514|emb|CAR71826.1| ribonucleotide reductase small subunit [Mycobacterium leprae
           Br4923]
          Length = 325

 Score = 34.3 bits (77), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 3/89 (3%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
             N W+P +VP+ +DL  W +   LT  E+ +  R        +++      +++     
Sbjct: 33  TGNFWLPEKVPVSNDLPSWGT---LTASEKQLTMRVFTGLTLLDTIQGTVGAVSLIPDAL 89

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            P         AF E+VH+ ++  I ++L
Sbjct: 90  TPHEEAVYTNIAFMESVHAKSYSSIFSTL 118


>gi|261211025|ref|ZP_05925315.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           sp. RC341]
 gi|260840000|gb|EEX66600.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           sp. RC341]
          Length = 360

 Score = 34.3 bits (77), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 3/116 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +     L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 32  WRPEEVDVSSDRIDY---GKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPEL 88

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
             ++   +F E +HS ++ +II ++  D   +F+   E   I  +A     Y   L
Sbjct: 89  ETWIETWSFSETIHSRSYTHIIRNIVNDPAVVFDDIVENEHIIKRAKDIAHYYDDL 144


>gi|261404531|ref|YP_003240772.1| Ribonucleoside-diphosphate reductase [Paenibacillus sp. Y412MC10]
 gi|261280994|gb|ACX62965.1| Ribonucleoside-diphosphate reductase [Paenibacillus sp. Y412MC10]
          Length = 343

 Score = 34.3 bits (77), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 23/106 (21%), Positives = 49/106 (46%), Gaps = 6/106 (5%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           NHW+  E+PM  D   +     L  +E+   K N+   A  +S+     V  + R+ ++ 
Sbjct: 47  NHWIADEIPMSKDAQQFPR---LDPEEQRTFKINISLLAVLDSM-QTMFVSDVKRYFTDS 102

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSI 155
                      +E VH+ ++ Y+++S+    ++ E+F  ++  P +
Sbjct: 103 SLEAISAIIGQQEVVHNQSYSYVLSSIVSEQEQKEIFEYWKHDPVL 148


>gi|251797995|ref|YP_003012726.1| ribonucleotide-diphosphate reductase subunit beta [Paenibacillus
           sp. JDR-2]
 gi|247545621|gb|ACT02640.1| Ribonucleoside-diphosphate reductase [Paenibacillus sp. JDR-2]
          Length = 318

 Score = 34.3 bits (77), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 3/89 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W   E+P+ DD   W     ++D ER + K  LG     +++     +  I  H+   + 
Sbjct: 26  WTDEEIPLSDDKMDWME---MSDTERTVYKNVLGGLTLLDTIQGGVGMPKILEHVDGLQR 82

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDE 142
           +  L   +  E +H+ ++  I T+L   E
Sbjct: 83  KAVLAFMSMMEQIHAKSYSSIFTTLASTE 111


>gi|238785708|ref|ZP_04629683.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           bercovieri ATCC 43970]
 gi|238713393|gb|EEQ05430.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           bercovieri ATCC 43970]
          Length = 376

 Score = 34.3 bits (77), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 3/94 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P E+ +  D   +   N L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEIDVSRDRIDY---NALPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFN 147
             ++   +F E +HS ++ +II ++  D   +F+
Sbjct: 106 ETWVETWSFSETIHSRSYTHIIRNIVNDPAIVFD 139


>gi|121590730|ref|ZP_01678061.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           2740-80]
 gi|147674333|ref|YP_001216820.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio cholerae
           O395]
 gi|153212320|ref|ZP_01948108.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           1587]
 gi|153801907|ref|ZP_01956493.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           MZO-3]
 gi|153823603|ref|ZP_01976270.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           B33]
 gi|153827294|ref|ZP_01979961.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           MZO-2]
 gi|153829732|ref|ZP_01982399.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           623-39]
 gi|227081427|ref|YP_002809978.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           M66-2]
 gi|254291706|ref|ZP_04962493.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           AM-19226]
 gi|254848379|ref|ZP_05237729.1| ribonucleoside-diphosphate reductase [Vibrio cholerae MO10]
 gi|297578847|ref|ZP_06940775.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio cholerae
           RC385]
 gi|298498653|ref|ZP_07008460.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           MAK 757]
 gi|9655738|gb|AAF94414.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           O1 biovar El Tor str. N16961]
 gi|121547411|gb|EAX57522.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           2740-80]
 gi|124116698|gb|EAY35518.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           1587]
 gi|124122552|gb|EAY41295.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           MZO-3]
 gi|126518882|gb|EAZ76105.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           B33]
 gi|146316216|gb|ABQ20755.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           O395]
 gi|148874766|gb|EDL72901.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           623-39]
 gi|149738785|gb|EDM53127.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           MZO-2]
 gi|150422390|gb|EDN14350.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           AM-19226]
 gi|227009315|gb|ACP05527.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           M66-2]
 gi|227013172|gb|ACP09382.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           O395]
 gi|254844084|gb|EET22498.1| ribonucleoside-diphosphate reductase [Vibrio cholerae MO10]
 gi|297536441|gb|EFH75274.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio cholerae
           RC385]
 gi|297542986|gb|EFH79036.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           MAK 757]
          Length = 389

 Score = 34.3 bits (77), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 3/116 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +     L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 61  WRPEEVDVSSDRIDY---GKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPEL 117

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
             ++   +F E +HS ++ +II ++  D   +F+   E   I  +A     Y   L
Sbjct: 118 ETWIETWSFSETIHSRSYTHIIRNIVNDPAVVFDDIVENEHIIKRAKDIAHYYDDL 173


>gi|238797463|ref|ZP_04640962.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           mollaretii ATCC 43969]
 gi|238718734|gb|EEQ10551.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           mollaretii ATCC 43969]
          Length = 376

 Score = 34.3 bits (77), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 3/94 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P E+ +  D   +   N L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEIDVSRDRIDY---NALPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFN 147
             ++   +F E +HS ++ +II ++  D   +F+
Sbjct: 106 ETWVETWSFSETIHSRSYTHIIRNIVNDPAIVFD 139


>gi|312173339|emb|CBX81594.1| ribonucleoside-diphosphate reductase 2 beta chain [Erwinia
           amylovora ATCC BAA-2158]
          Length = 319

 Score = 34.3 bits (77), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 20/89 (22%), Positives = 41/89 (46%), Gaps = 3/89 (3%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
            +N W+P +VP+ +D+  W   N ++ DE+ +  R        +++       A+     
Sbjct: 27  TSNFWLPEKVPLSNDIPSW---NSISADEQQLTIRVFTGLTLLDTIQNTLGAPALMADAL 83

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            P     +   +F EAVH+ ++  I ++L
Sbjct: 84  TPHEEAVMSNISFMEAVHARSYSSIFSTL 112


>gi|229505158|ref|ZP_04394668.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae BX 330286]
 gi|229511170|ref|ZP_04400649.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae B33]
 gi|229515628|ref|ZP_04405087.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae TMA 21]
 gi|229518289|ref|ZP_04407733.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae RC9]
 gi|229521368|ref|ZP_04410787.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae TM 11079-80]
 gi|229525854|ref|ZP_04415259.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae bv. albensis VL426]
 gi|229529665|ref|ZP_04419055.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae 12129(1)]
 gi|229608178|ref|YP_002878826.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio cholerae
           MJ-1236]
 gi|229333439|gb|EEN98925.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae 12129(1)]
 gi|229339435|gb|EEO04452.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae bv. albensis VL426]
 gi|229341466|gb|EEO06469.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae TM 11079-80]
 gi|229345004|gb|EEO09978.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae RC9]
 gi|229347397|gb|EEO12357.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae TMA 21]
 gi|229351135|gb|EEO16076.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae B33]
 gi|229357381|gb|EEO22298.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae BX 330286]
 gi|229370833|gb|ACQ61256.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae MJ-1236]
          Length = 381

 Score = 34.3 bits (77), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 3/116 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +     L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 53  WRPEEVDVSSDRIDY---GKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPEL 109

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
             ++   +F E +HS ++ +II ++  D   +F+   E   I  +A     Y   L
Sbjct: 110 ETWIETWSFSETIHSRSYTHIIRNIVNDPAVVFDDIVENEHIIKRAKDIAHYYDDL 165


>gi|51595597|ref|YP_069788.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           pseudotuberculosis IP 32953]
 gi|108806924|ref|YP_650840.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Antiqua]
 gi|108812924|ref|YP_648691.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Nepal516]
 gi|145599749|ref|YP_001163825.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Pestoides F]
 gi|149366796|ref|ZP_01888830.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           CA88-4125]
 gi|153950490|ref|YP_001401734.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           pseudotuberculosis IP 31758]
 gi|161484771|ref|NP_670275.2| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           KIM 10]
 gi|161511422|ref|NP_992302.2| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           biovar Microtus str. 91001]
 gi|162418296|ref|YP_001605847.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Angola]
 gi|165924721|ref|ZP_02220553.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165938305|ref|ZP_02226863.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166009974|ref|ZP_02230872.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166211802|ref|ZP_02237837.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167400353|ref|ZP_02305866.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167419574|ref|ZP_02311327.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167424117|ref|ZP_02315870.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|167470792|ref|ZP_02335496.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           FV-1]
 gi|170025073|ref|YP_001721578.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           pseudotuberculosis YPIII]
 gi|186894660|ref|YP_001871772.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           pseudotuberculosis PB1/+]
 gi|218928372|ref|YP_002346247.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           CO92]
 gi|229841157|ref|ZP_04461316.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229843262|ref|ZP_04463408.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229894122|ref|ZP_04509308.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           Pestoides A]
 gi|229903354|ref|ZP_04518467.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           Nepal516]
 gi|270487164|ref|ZP_06204238.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           KIM D27]
 gi|294503227|ref|YP_003567289.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
           Z176003]
 gi|51588879|emb|CAH20493.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia
           pseudotuberculosis IP 32953]
 gi|108776572|gb|ABG19091.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Yersinia pestis Nepal516]
 gi|108778837|gb|ABG12895.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Yersinia pestis Antiqua]
 gi|115346983|emb|CAL19874.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           CO92]
 gi|145211445|gb|ABP40852.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Yersinia pestis Pestoides F]
 gi|149291170|gb|EDM41245.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           CA88-4125]
 gi|152961985|gb|ABS49446.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia
           pseudotuberculosis IP 31758]
 gi|162351111|gb|ABX85059.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           Angola]
 gi|165913683|gb|EDR32302.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165923781|gb|EDR40913.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165991370|gb|EDR43671.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166207573|gb|EDR52053.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166962315|gb|EDR58336.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167050302|gb|EDR61710.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167056966|gb|EDR66729.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|169751607|gb|ACA69125.1| Ribonucleoside-diphosphate reductase [Yersinia pseudotuberculosis
           YPIII]
 gi|186697686|gb|ACC88315.1| ribonucleotide reductase [Yersinia pseudotuberculosis PB1/+]
 gi|229679124|gb|EEO75227.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           Nepal516]
 gi|229689609|gb|EEO81670.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229697523|gb|EEO87570.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229704007|gb|EEO91020.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           Pestoides A]
 gi|262361266|gb|ACY57987.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
           D106004]
 gi|262365197|gb|ACY61754.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
           D182038]
 gi|270335668|gb|EFA46445.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           KIM D27]
 gi|294353686|gb|ADE64027.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
           Z176003]
 gi|320015945|gb|ADV99516.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 376

 Score = 34.3 bits (77), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 3/94 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P E+ +  D   +   N L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEIDVSRDRIDY---NALPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFN 147
             ++   +F E +HS ++ +II ++  D   +F+
Sbjct: 106 ETWVETWSFSETIHSRSYTHIIRNIVNDPSVVFD 139


>gi|218291056|ref|ZP_03495088.1| ribonucleotide reductase [Alicyclobacillus acidocaldarius LAA1]
 gi|218239010|gb|EED06216.1| ribonucleotide reductase [Alicyclobacillus acidocaldarius LAA1]
          Length = 317

 Score = 34.3 bits (77), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 7/101 (6%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNI---VLAIYRHLSN 110
           W P ++    D   WK+ N   + ER +I R    F + E  V  ++   ++A+ R    
Sbjct: 37  WDPRDIDFSKDKEDWKAMN---EAERRVILRLCSLFVAGEEAVTLDLLPLIMAVARE-GR 92

Query: 111 PECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYRE 151
            E   YL    FEEA H+  F+  +  +  +  +L   +++
Sbjct: 93  LEEEMYLTTFLFEEAKHTEVFRRFLDEVAGESSDLSTFHKD 133


>gi|209695249|ref|YP_002263178.1| ribonucleotide-diphosphate reductase subunit beta [Aliivibrio
           salmonicida LFI1238]
 gi|208009201|emb|CAQ79455.1| ribonucleoside-diphosphate reductase 1 beta chain [Aliivibrio
           salmonicida LFI1238]
          Length = 377

 Score = 34.3 bits (77), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 3/123 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +   N L + E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSGDRIDY---NNLPEHEQHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
             ++   +F E +HS ++ +I+ ++  D   +F+   E   I  +A     Y   L   +
Sbjct: 106 ETWIETWSFSETIHSRSYTHIVRNIVNDPAIIFDDIVENEEILKRAKDIAHYYDNLIQAT 165

Query: 174 FHY 176
             Y
Sbjct: 166 NDY 168


>gi|257870055|ref|ZP_05649708.1| ribonucleoside-diphosphate reductase [Enterococcus gallinarum EG2]
 gi|257804219|gb|EEV33041.1| ribonucleoside-diphosphate reductase [Enterococcus gallinarum EG2]
          Length = 322

 Score = 34.3 bits (77), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 21/97 (21%), Positives = 45/97 (46%), Gaps = 6/97 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  W++   L+D E+  +    G     +++ + + +
Sbjct: 22  TWEK---LTEQFWLDTRIPLSNDLDDWRT---LSDLEKTTVGYVFGGLTLLDTVQSESGM 75

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
             + + +  P     L    F E+VH+ ++  I ++L
Sbjct: 76  DQLRKDVRTPHEEAVLNNIQFMESVHAKSYSSIFSTL 112


>gi|195439308|ref|XP_002067573.1| GK16502 [Drosophila willistoni]
 gi|194163658|gb|EDW78559.1| GK16502 [Drosophila willistoni]
          Length = 1747

 Score = 34.3 bits (77), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 15/35 (42%), Positives = 22/35 (62%)

Query: 144  ELFNMYREVPSITAKANWALQYTQTLSSPSFHYWN 178
            EL   YR+VPS  A+ +W  QY  ++++ S  YWN
Sbjct: 1624 ELEKKYRKVPSEEAEPHWTEQYDASVNTCSHAYWN 1658


>gi|161572976|ref|YP_207754.2| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae FA 1090]
 gi|194098862|ref|YP_002001926.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae NCCP11945]
 gi|239999147|ref|ZP_04719071.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae 35/02]
 gi|240013945|ref|ZP_04720858.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae DGI18]
 gi|240016387|ref|ZP_04722927.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae FA6140]
 gi|240080506|ref|ZP_04725049.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae FA19]
 gi|240113126|ref|ZP_04727616.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae MS11]
 gi|240115882|ref|ZP_04729944.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae PID18]
 gi|240118180|ref|ZP_04732242.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae PID1]
 gi|240121514|ref|ZP_04734476.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae PID24-1]
 gi|240123728|ref|ZP_04736684.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae PID332]
 gi|240125919|ref|ZP_04738805.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae SK-92-679]
 gi|240128431|ref|ZP_04741092.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae SK-93-1035]
 gi|193934152|gb|ACF29976.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           gonorrhoeae NCCP11945]
          Length = 377

 Score = 34.3 bits (77), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 3/106 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P E+ +  D   + +   L + E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKA 159
             ++   +F E +HS ++ +II ++  D   +F+   E   ITA+A
Sbjct: 106 ETWVETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITARA 151


>gi|21959884|gb|AAM86526.1|AE013899_3 ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Yersinia
           pestis KIM 10]
 gi|45435621|gb|AAS61179.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           biovar Microtus str. 91001]
          Length = 391

 Score = 34.3 bits (77), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 3/94 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P E+ +  D   +   N L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 64  WRPEEIDVSRDRIDY---NALPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPEL 120

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFN 147
             ++   +F E +HS ++ +II ++  D   +F+
Sbjct: 121 ETWVETWSFSETIHSRSYTHIIRNIVNDPSVVFD 154


>gi|227328222|ref|ZP_03832246.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 376

 Score = 34.3 bits (77), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 24/94 (25%), Positives = 47/94 (50%), Gaps = 3/94 (3%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +++   L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSRDRIDYQA---LPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFN 147
             ++   AF E +HS ++ +II ++  D   +F+
Sbjct: 106 ETWVETWAFSETIHSRSYTHIIRNIVNDPSLVFD 139


>gi|206577235|ref|YP_002236984.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella
           pneumoniae 342]
 gi|206566293|gb|ACI08069.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella
           pneumoniae 342]
          Length = 320

 Score = 34.3 bits (77), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 3/88 (3%)

Query: 51  NNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSN 110
           +N W+P +VP+ +D+  W++ +       + +   L    + ++ V    ++A       
Sbjct: 29  SNFWLPEKVPLSNDIPAWQTLSAAEQQLTIRVFTGLTLLDTIQNTVGAPALMA---DSLT 85

Query: 111 PECRQYLLRQAFEEAVHSHTFQYIITSL 138
           P     L   +F EAVH+ ++  I ++L
Sbjct: 86  PHEEAVLSNISFMEAVHARSYSSIFSTL 113


>gi|161582009|ref|NP_230900.2| ribonucleotide-diphosphate reductase subunit beta [Vibrio cholerae
           O1 biovar El Tor str. N16961]
 gi|255745652|ref|ZP_05419600.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholera CIRS 101]
 gi|262159072|ref|ZP_06030184.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae INDRE 91/1]
 gi|262169430|ref|ZP_06037122.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae RC27]
 gi|262191406|ref|ZP_06049594.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae CT 5369-93]
 gi|255736727|gb|EET92124.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholera CIRS 101]
 gi|262022243|gb|EEY40952.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae RC27]
 gi|262029257|gb|EEY47909.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae INDRE 91/1]
 gi|262032695|gb|EEY51245.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae CT 5369-93]
 gi|327483944|gb|AEA78351.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Vibrio cholerae LMA3894-4]
          Length = 377

 Score = 34.3 bits (77), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 3/116 (2%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P EV +  D   +     L D E+ +   NL +    +S+   +  +A+   +S PE 
Sbjct: 49  WRPEEVDVSSDRIDY---GKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPEL 105

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
             ++   +F E +HS ++ +II ++  D   +F+   E   I  +A     Y   L
Sbjct: 106 ETWIETWSFSETIHSRSYTHIIRNIVNDPAVVFDDIVENEHIIKRAKDIAHYYDDL 161


>gi|99080359|ref|YP_612513.1| ribonucleotide-diphosphate reductase subunit beta [Ruegeria sp.
           TM1040]
 gi|99036639|gb|ABF63251.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Ruegeria sp. TM1040]
          Length = 338

 Score = 34.3 bits (77), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 28/123 (22%), Positives = 51/123 (41%), Gaps = 5/123 (4%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           N W+P +VP+ +D+  W     LT DE+ +  R        +++        + +    P
Sbjct: 47  NFWLPEKVPLSNDIQSWSQ---LTPDEQTLTIRVFTGLTLLDTIQNAVGAPTLMQDAITP 103

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANWALQYTQTL 169
                L   +F EAVH+ ++  + ++L    +  E F    E   + AK+   L      
Sbjct: 104 HEEAVLSNISFMEAVHARSYSSVFSTLCQTTEVDEAFRWSAENEHLQAKSRLILGEYDAT 163

Query: 170 SSP 172
           +SP
Sbjct: 164 ASP 166


Searching..................................................done


Results from round 2




>gi|294840478|ref|ZP_06785161.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           sp. 6014059]
          Length = 427

 Score =  278 bits (711), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 116/189 (61%), Positives = 150/189 (79%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G +RV VDDK M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 82  GLEELEMGAQRVQVDDKAMINCRADLNQLVPFKYEWAWQKYLDGCANHWMPQEVNMNHDI 141

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS+NGLT+DER ++ R+LGFF++++SLVANN+VLAIYRH++NPECRQY+LRQAFEEA
Sbjct: 142 ALWKSENGLTEDERTIVMRSLGFFSTADSLVANNLVLAIYRHITNPECRQYILRQAFEEA 201

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMYRE+PS+  KA W L+YTQ+LS P+FH        R+
Sbjct: 202 IHTHAYQYCIESLGMDEGEVFNMYREIPSVARKAAWGLKYTQSLSDPTFHTGTPENDQRL 261

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 262 LRNLIAFYC 270


>gi|293609145|ref|ZP_06691448.1| ribonucleoside-diphosphate reductase [Acinetobacter sp. SH024]
 gi|292829718|gb|EFF88080.1| ribonucleoside-diphosphate reductase [Acinetobacter sp. SH024]
          Length = 427

 Score =  277 bits (709), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 116/189 (61%), Positives = 150/189 (79%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G +RV VDDK M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 82  GLEELEMGAQRVQVDDKAMINCRADLNQLVPFKYEWAWQKYLDGCANHWMPQEVNMNHDI 141

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS+NGLT+DER ++ R+LGFF++++SLVANN+VLAIYRH++NPECRQY+LRQAFEEA
Sbjct: 142 ALWKSENGLTEDERTIVMRSLGFFSTADSLVANNLVLAIYRHITNPECRQYILRQAFEEA 201

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMYREVPS+  KA W L+YTQ+L+ P+FH        R+
Sbjct: 202 IHTHAYQYCIESLGMDEGEVFNMYREVPSVARKAAWGLKYTQSLTDPNFHTGTPENDQRL 261

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 262 LRNLIAFYC 270


>gi|184157022|ref|YP_001845361.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii ACICU]
 gi|183208616|gb|ACC56014.1| Ribonucleotide reductase, beta subunit [Acinetobacter baumannii
           ACICU]
          Length = 427

 Score =  277 bits (709), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 116/189 (61%), Positives = 150/189 (79%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G +RV VDDK M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 82  GLEELEMGAQRVQVDDKAMINCRADLNQLVPFKYEWAWQKYLDGCANHWMPQEVNMNHDI 141

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS+NGLT+DER ++ R+LGFF++++SLVANN+VLAIYRH++NPECRQY+LRQAFEEA
Sbjct: 142 ALWKSENGLTEDERTIVMRSLGFFSTADSLVANNLVLAIYRHITNPECRQYILRQAFEEA 201

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMYRE+PS+  KA W L+YTQ+LS P+FH        R+
Sbjct: 202 IHTHAYQYCIESLGMDEGEVFNMYREIPSVARKAAWGLKYTQSLSDPTFHTGTPENDQRL 261

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 262 LRNLIAFYC 270


>gi|169797064|ref|YP_001714857.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AYE]
 gi|213156529|ref|YP_002318190.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii AB0057]
 gi|215484526|ref|YP_002326761.1| ribonucleotide-diphosphate reductase small chain [Acinetobacter
           baumannii AB307-0294]
 gi|239501302|ref|ZP_04660612.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AB900]
 gi|260555643|ref|ZP_05827863.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii ATCC 19606]
 gi|294839369|ref|ZP_06784052.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           sp. 6013113]
 gi|294859388|ref|ZP_06797157.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           sp. 6013150]
 gi|301345633|ref|ZP_07226374.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AB056]
 gi|301512780|ref|ZP_07238017.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AB058]
 gi|301596291|ref|ZP_07241299.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AB059]
 gi|169149991|emb|CAM87885.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii AYE]
 gi|193076530|gb|ABO11186.2| ribonucleoside-diphosphate reductase beta subunit [Acinetobacter
           baumannii ATCC 17978]
 gi|213055689|gb|ACJ40591.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii AB0057]
 gi|213987168|gb|ACJ57467.1| ribonucleotide-diphosphate reductase small chain [Acinetobacter
           baumannii AB307-0294]
 gi|260410554|gb|EEX03852.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii ATCC 19606]
          Length = 427

 Score =  277 bits (709), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 116/189 (61%), Positives = 150/189 (79%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G +RV VDDK M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 82  GLEELEMGAQRVQVDDKAMINCRADLNQLVPFKYEWAWQKYLDGCANHWMPQEVNMNHDI 141

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS+NGLT+DER ++ R+LGFF++++SLVANN+VLAIYRH++NPECRQY+LRQAFEEA
Sbjct: 142 ALWKSENGLTEDERTIVMRSLGFFSTADSLVANNLVLAIYRHITNPECRQYILRQAFEEA 201

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMYRE+PS+  KA W L+YTQ+LS P+FH        R+
Sbjct: 202 IHTHAYQYCIESLGMDEGEVFNMYREIPSVARKAAWGLKYTQSLSDPTFHTGTPENDQRL 261

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 262 LRNLIAFYC 270


>gi|260551040|ref|ZP_05825245.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter
           sp. RUH2624]
 gi|260405988|gb|EEW99475.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter
           sp. RUH2624]
          Length = 427

 Score =  277 bits (709), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 116/189 (61%), Positives = 150/189 (79%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G +RV VDDK M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 82  GLEELEMGAQRVQVDDKAMINCRADLNQLVPFKYEWAWQKYLDGCANHWMPQEVNMNHDI 141

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS+NGLT+DER ++ R+LGFF++++SLVANN+VLAIYRH++NPECRQY+LRQAFEEA
Sbjct: 142 ALWKSENGLTEDERTIVMRSLGFFSTADSLVANNLVLAIYRHITNPECRQYILRQAFEEA 201

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMYRE+PS+  KA W L+YTQ+LS P+FH        R+
Sbjct: 202 IHTHAYQYCIESLGMDEGEVFNMYREIPSVARKAAWGLKYTQSLSDPTFHTGTPENDQRL 261

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 262 LRNLIAFYC 270


>gi|169634186|ref|YP_001707922.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii SDF]
 gi|169152978|emb|CAP02026.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           baumannii]
          Length = 427

 Score =  277 bits (708), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 116/189 (61%), Positives = 150/189 (79%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G +RV VDDK M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 82  GLEELEMGAQRVQVDDKAMINCRADLNQLVPFKYEWAWQKYLDGCANHWMPQEVNMNHDI 141

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS+NGLT+DER ++ R+LGFF++++SLVANN+VLAIYRH++NPECRQY+LRQAFEEA
Sbjct: 142 ALWKSENGLTEDERTIVMRSLGFFSTADSLVANNLVLAIYRHITNPECRQYILRQAFEEA 201

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMYRE+PS+  KA W L+YTQ+LS P+FH        R+
Sbjct: 202 IHTHAYQYCIESLGMDEGEVFNMYREIPSVARKAAWGLKYTQSLSDPTFHTGTPENDQRL 261

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 262 LRNLIAFYC 270


>gi|262373382|ref|ZP_06066661.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           junii SH205]
 gi|262313407|gb|EEY94492.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           junii SH205]
          Length = 427

 Score =  277 bits (708), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 116/189 (61%), Positives = 151/189 (79%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G +RV VDDK M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 82  GLEELEMGAQRVQVDDKAMINCRADLNQLVPFKYEWAWQKYLDGCANHWMPQEVNMNHDI 141

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS+NGLT+DER ++ R+LGFF++++SLVANN+VLAIYRH++NPECRQY+LRQAFEEA
Sbjct: 142 ALWKSENGLTEDERTIVMRSLGFFSTADSLVANNLVLAIYRHITNPECRQYILRQAFEEA 201

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMYRE+PS+  KA+W L+YTQ+LS P+FH        R+
Sbjct: 202 IHTHAYQYCIESLGMDEGEVFNMYREIPSVARKASWGLKYTQSLSDPTFHTGTPENDQRL 261

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 262 LRNLIAFYC 270


>gi|226953559|ref|ZP_03824023.1| ribonucleotide reductase, beta subunit [Acinetobacter sp. ATCC
           27244]
 gi|294649451|ref|ZP_06726876.1| ribonucleotide-diphosphate reductase beta subunit [Acinetobacter
           haemolyticus ATCC 19194]
 gi|226835696|gb|EEH68079.1| ribonucleotide reductase, beta subunit [Acinetobacter sp. ATCC
           27244]
 gi|292824656|gb|EFF83434.1| ribonucleotide-diphosphate reductase beta subunit [Acinetobacter
           haemolyticus ATCC 19194]
          Length = 427

 Score =  276 bits (706), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 117/189 (61%), Positives = 149/189 (78%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G +RV VDDK M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 82  GLEELEMGAQRVQVDDKAMINCRADLNQLVPFKYEWAWQKYLDGCANHWMPQEVNMNHDI 141

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS+NGLT+DER +I R+LGFF++++SLVANN+VLAIYRH++NPECRQY+LRQAFEEA
Sbjct: 142 ALWKSENGLTEDERTIIMRSLGFFSTADSLVANNLVLAIYRHITNPECRQYILRQAFEEA 201

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMYREVPS+  KA W L+YTQ+LS P+FH         +
Sbjct: 202 IHTHAYQYCIESLGMDEGEVFNMYREVPSVARKAAWGLKYTQSLSDPTFHTGTPENDQIL 261

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 262 LRNLIAFYC 270


>gi|325121074|gb|ADY80597.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 370

 Score =  275 bits (703), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 116/189 (61%), Positives = 150/189 (79%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G +RV VDDK M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 25  GLEELEMGAQRVQVDDKAMINCRADLNQLVPFKYEWAWQKYLDGCANHWMPQEVNMNHDI 84

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS+NGLT+DER ++ R+LGFF++++SLVANN+VLAIYRH++NPECRQY+LRQAFEEA
Sbjct: 85  ALWKSENGLTEDERTIVMRSLGFFSTADSLVANNLVLAIYRHITNPECRQYILRQAFEEA 144

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMYREVPS+  KA W L+YTQ+L+ P+FH        R+
Sbjct: 145 IHTHAYQYCIESLGMDEGEVFNMYREVPSVARKAAWGLKYTQSLTDPNFHTGTPENDQRL 204

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 205 LRNLIAFYC 213


>gi|262280153|ref|ZP_06057938.1| ribonucleoside-diphosphate reductase beta subunit [Acinetobacter
           calcoaceticus RUH2202]
 gi|262260504|gb|EEY79237.1| ribonucleoside-diphosphate reductase beta subunit [Acinetobacter
           calcoaceticus RUH2202]
          Length = 427

 Score =  275 bits (703), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 116/189 (61%), Positives = 150/189 (79%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G +RV VDDK M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 82  GLEELEMGAQRVQVDDKAMINCRADLNQLVPFKYEWAWQKYLDGCANHWMPQEVNMNLDI 141

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS+NGLT+DER ++ R+LGFF++++SLVANN+VLAIYRH++NPECRQY+LRQAFEEA
Sbjct: 142 ALWKSENGLTEDERTIVMRSLGFFSTADSLVANNLVLAIYRHITNPECRQYILRQAFEEA 201

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMYREVPS+  KA W L+YTQ+L+ P+FH        R+
Sbjct: 202 IHTHAYQYCIESLGMDEGEVFNMYREVPSVARKAAWGLKYTQSLTDPNFHTGTPENDQRL 261

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 262 LRNLIAFYC 270


>gi|299771426|ref|YP_003733452.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           sp. DR1]
 gi|298701514|gb|ADI92079.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           sp. DR1]
          Length = 427

 Score =  274 bits (702), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 116/189 (61%), Positives = 150/189 (79%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G +RV VDDK M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 82  GLEELEMGAQRVQVDDKAMINCRADLNQLVPFKYEWAWQKYLDGCANHWMPQEVNMNLDI 141

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS+NGLT+DER ++ R+LGFF++++SLVANN+VLAIYRH++NPECRQY+LRQAFEEA
Sbjct: 142 ALWKSENGLTEDERTIVMRSLGFFSTADSLVANNLVLAIYRHITNPECRQYILRQAFEEA 201

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMYREVPS+  KA W L+YTQ+L+ P+FH        R+
Sbjct: 202 IHTHAYQYCIESLGMDEGEVFNMYREVPSVARKAAWGLKYTQSLTDPNFHTGTPENDQRL 261

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 262 LRNLIAFYC 270


>gi|126640804|ref|YP_001083788.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii ATCC 17978]
 gi|322506921|gb|ADX02375.1| nrdB [Acinetobacter baumannii 1656-2]
 gi|323516789|gb|ADX91170.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii TCDC-AB0715]
          Length = 361

 Score =  274 bits (702), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 116/189 (61%), Positives = 150/189 (79%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G +RV VDDK M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 16  GLEELEMGAQRVQVDDKAMINCRADLNQLVPFKYEWAWQKYLDGCANHWMPQEVNMNHDI 75

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS+NGLT+DER ++ R+LGFF++++SLVANN+VLAIYRH++NPECRQY+LRQAFEEA
Sbjct: 76  ALWKSENGLTEDERTIVMRSLGFFSTADSLVANNLVLAIYRHITNPECRQYILRQAFEEA 135

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMYRE+PS+  KA W L+YTQ+LS P+FH        R+
Sbjct: 136 IHTHAYQYCIESLGMDEGEVFNMYREIPSVARKAAWGLKYTQSLSDPTFHTGTPENDQRL 195

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 196 LRNLIAFYC 204


>gi|288941383|ref|YP_003443623.1| Ribonucleoside-diphosphate reductase [Allochromatium vinosum DSM
           180]
 gi|288896755|gb|ADC62591.1| Ribonucleoside-diphosphate reductase [Allochromatium vinosum DSM
           180]
          Length = 458

 Score =  274 bits (702), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 115/190 (60%), Positives = 148/190 (77%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
            TGL  +  G  RV VDDKR++N R+D+NQL+P KY WAW+KYL AC NHWMP E+ M  
Sbjct: 110 ATGLESLAMGASRVRVDDKRIINCRADLNQLVPFKYDWAWQKYLDACANHWMPQEISMNA 169

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           DLALWK  +GLT+DERL++KRNLGFF++++SLVANN+VLA+YRH++NPECRQYLLRQAFE
Sbjct: 170 DLALWKDPHGLTEDERLIVKRNLGFFSTADSLVANNLVLAVYRHITNPECRQYLLRQAFE 229

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QY++ SLGLDEGE+FNMYREVP++  KA WAL +TQ L+ P F         
Sbjct: 230 EALHTHAYQYVVESLGLDEGEIFNMYREVPAVARKAEWALPFTQHLADPHFQTGTPENDQ 289

Query: 184 RILTRSLRFL 193
           ++L   + F 
Sbjct: 290 KLLRELVAFY 299


>gi|50083944|ref|YP_045454.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           sp. ADP1]
 gi|49529920|emb|CAG67632.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           sp. ADP1]
          Length = 427

 Score =  274 bits (700), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 115/191 (60%), Positives = 147/191 (76%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
             GL  I+ G  RV VDDK M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  
Sbjct: 80  TAGLQEIETGAARVQVDDKAMINCRADLNQLVPFKYEWAWQKYLDGCANHWMPQEVNMNH 139

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWKS+NGLT+DER+++KRNLGFF++++SLVANN+VLAIYR ++NPECRQY+LRQAFE
Sbjct: 140 DIALWKSENGLTEDERVIVKRNLGFFSTADSLVANNLVLAIYRLITNPECRQYILRQAFE 199

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QY I SLG+DEGE+FNMY E+PS+  KA W L+YTQ+LS P F         
Sbjct: 200 EAIHTHAYQYCIESLGMDEGEIFNMYHEIPSVARKAAWGLKYTQSLSDPKFETGTPETDQ 259

Query: 184 RILTRSLRFLC 194
           ++L   + F C
Sbjct: 260 QLLRNLIAFYC 270


>gi|300113307|ref|YP_003759882.1| ribonucleoside-diphosphate reductase [Nitrosococcus watsonii C-113]
 gi|299539244|gb|ADJ27561.1| Ribonucleoside-diphosphate reductase [Nitrosococcus watsonii C-113]
          Length = 412

 Score =  273 bits (698), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 116/188 (61%), Positives = 147/188 (78%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           G+  I+ G  R+ VDDKR++N R+D+NQL+P KY WAWEKYLS C NHWMP E+ M  D+
Sbjct: 66  GVEDIEMGAARIQVDDKRIINCRADLNQLVPFKYHWAWEKYLSGCANHWMPQEINMNADI 125

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS +GLT+DER +IKRNLGFF +++SLVANN+VLA+YRH++NPECRQYLLRQAFEEA
Sbjct: 126 ALWKSADGLTEDERTIIKRNLGFFVTADSLVANNLVLAVYRHITNPECRQYLLRQAFEEA 185

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           VH+H +QY + SLGLDEGE+FNMYREVP++  KA WAL +TQ L+ P FH        ++
Sbjct: 186 VHTHAYQYCVESLGLDEGEIFNMYREVPAVARKAEWALPFTQHLADPQFHTGTAENDQKL 245

Query: 186 LTRSLRFL 193
           L   + F 
Sbjct: 246 LRELIAFY 253


>gi|262376783|ref|ZP_06070011.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           lwoffii SH145]
 gi|262308493|gb|EEY89628.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           lwoffii SH145]
          Length = 427

 Score =  273 bits (698), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 115/189 (60%), Positives = 148/189 (78%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G +RV VDDK M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 82  GLEELEMGAQRVQVDDKAMINCRADLNQLVPFKYEWAWQKYLDGCANHWMPQEVNMNHDI 141

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS+NGLT+DER ++ R+LGFF++++SLVANN+VLAIYRH++NPECRQY+LRQAFEEA
Sbjct: 142 ALWKSENGLTEDERTIVMRSLGFFSTADSLVANNLVLAIYRHITNPECRQYILRQAFEEA 201

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMYREVPS+  KA W L+YTQ+LS P+F          +
Sbjct: 202 IHTHAYQYCIESLGMDEGEVFNMYREVPSVARKAAWGLKYTQSLSDPTFKTGTPENDQIL 261

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 262 LRNLIAFYC 270


>gi|220935777|ref|YP_002514676.1| Ribonucleoside-diphosphate reductase [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219997087|gb|ACL73689.1| Ribonucleoside-diphosphate reductase [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 408

 Score =  272 bits (697), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 113/192 (58%), Positives = 149/192 (77%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
             NTGL  I+ G +R+ VDDK+++N R+D+NQL+P KY WAW+KYL  C NHWMP E+ M
Sbjct: 58  TGNTGLEDIELGAERIRVDDKKIINCRADLNQLVPFKYQWAWQKYLDGCANHWMPQEINM 117

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D+ALWK  NGLT+DER ++KRNLGFF++++SLVANN+VLA+YRH++NPECRQYLLRQA
Sbjct: 118 NADIALWKDPNGLTEDERTIVKRNLGFFSTADSLVANNLVLAVYRHITNPECRQYLLRQA 177

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRR 181
           FEEA+H+H +QY + SLGLDEGE+FNMYREVP++  KA WAL +T+ L+ P FH      
Sbjct: 178 FEEALHTHAYQYCVESLGLDEGEIFNMYREVPAVARKAEWALPFTRYLADPDFHTGTPEN 237

Query: 182 RSRILTRSLRFL 193
             ++L   + F 
Sbjct: 238 DQKLLRELIAFY 249


>gi|254780845|ref|YP_003065258.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254780964|ref|YP_003065377.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254040522|gb|ACT57318.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254040641|gb|ACT57437.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter asiaticus str. psy62]
          Length = 352

 Score =  272 bits (696), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 177/193 (91%), Positives = 177/193 (91%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP
Sbjct: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ
Sbjct: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF    K 
Sbjct: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFTTGTKD 180

Query: 181 RRSRILTRSLRFL 193
                L     F 
Sbjct: 181 ADQEFLQDLFVFY 193


>gi|262369327|ref|ZP_06062655.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter
           johnsonii SH046]
 gi|262315395|gb|EEY96434.1| ribonucleotide-diphosphate reductase small subunit [Acinetobacter
           johnsonii SH046]
          Length = 427

 Score =  272 bits (696), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 115/189 (60%), Positives = 148/189 (78%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G +RV VDDK M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 82  GLEELEMGAQRVQVDDKAMINCRADLNQLVPFKYEWAWQKYLDGCANHWMPQEVNMNHDI 141

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS+NGLT+DER ++ R+LGFF++++SLVANN+VLAIYRH++NPECRQY+LRQAFEEA
Sbjct: 142 ALWKSENGLTEDERTIVMRSLGFFSTADSLVANNLVLAIYRHITNPECRQYILRQAFEEA 201

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMYREVPS+  KA W L+YTQ+LS P+F          +
Sbjct: 202 IHTHAYQYCIESLGMDEGEVFNMYREVPSVARKAAWGLKYTQSLSDPTFQTGTPENDQIL 261

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 262 LRNLIAFYC 270


>gi|255318309|ref|ZP_05359544.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           radioresistens SK82]
 gi|262379054|ref|ZP_06072210.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           radioresistens SH164]
 gi|255304621|gb|EET83803.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           radioresistens SK82]
 gi|262298511|gb|EEY86424.1| ribonucleoside-diphosphate reductase, beta subunit [Acinetobacter
           radioresistens SH164]
          Length = 427

 Score =  272 bits (696), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 115/189 (60%), Positives = 148/189 (78%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G +RV VDDK M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 82  GLEELEMGAQRVQVDDKAMINCRADLNQLVPFKYEWAWQKYLDGCANHWMPQEVNMNHDI 141

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS+NGLT+DER ++ R+LGFF++++SLVANN+VLAIYRH++NPECRQY+LRQAFEEA
Sbjct: 142 ALWKSENGLTEDERTIVMRSLGFFSTADSLVANNLVLAIYRHITNPECRQYILRQAFEEA 201

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMYREVPS+  KA W L+YTQ+LS P+F          +
Sbjct: 202 IHTHAYQYCIESLGMDEGEVFNMYREVPSVARKAAWGLKYTQSLSDPTFKTGTPENDQIL 261

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 262 LRNLIAFYC 270


>gi|312795100|ref|YP_004028022.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
           rhizoxinica HKI 454]
 gi|312166875|emb|CBW73878.1| Ribonucleoside-diphosphate reductase beta chain (EC 1.17.4.1)
           [Burkholderia rhizoxinica HKI 454]
          Length = 416

 Score =  271 bits (693), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 110/192 (57%), Positives = 139/192 (72%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
             +  SP  A E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M 
Sbjct: 67  QQSNASPAPAPEARVNVADKRIINGKTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMS 126

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D+ALWK  NGLTDDER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAF
Sbjct: 127 RDIALWKDPNGLTDDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAF 186

Query: 123 EEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRR 182
           EEA+H+H +QYI+ SLGLDEGE+FN Y EV SI AK  + + +  TL+ PSF        
Sbjct: 187 EEAIHTHAYQYIVESLGLDEGEIFNAYHEVSSIRAKDEFLIPFIHTLTDPSFKTGTLEAD 246

Query: 183 SRILTRSLRFLC 194
            ++L   + F C
Sbjct: 247 QKLLKSLIVFAC 258


>gi|77165986|ref|YP_344511.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosococcus
           oceani ATCC 19707]
 gi|254436303|ref|ZP_05049809.1| ribonucleoside-diphosphate reductase, beta subunit [Nitrosococcus
           oceani AFC27]
 gi|76884300|gb|ABA58981.1| Ribonucleoside-diphosphate reductase [Nitrosococcus oceani ATCC
           19707]
 gi|207087993|gb|EDZ65266.1| ribonucleoside-diphosphate reductase, beta subunit [Nitrosococcus
           oceani AFC27]
          Length = 412

 Score =  271 bits (693), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 116/188 (61%), Positives = 147/188 (78%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           G+  I+ G  R+ VDDKR++N R+D+NQL+P KY WAWEKYLS C NHWMP E+ M  D+
Sbjct: 66  GVEDIEMGAARIQVDDKRIINCRADLNQLVPFKYHWAWEKYLSGCANHWMPQEINMNADI 125

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS +GLT+DER +IKRNLGFF +++SLVANN+VLA+YRH++NPECRQYLLRQAFEEA
Sbjct: 126 ALWKSADGLTEDERTIIKRNLGFFVTADSLVANNLVLAVYRHITNPECRQYLLRQAFEEA 185

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           VH+H +QY + SLGLDEGE+FNMYREVP++  KA WAL +TQ L+ P FH        ++
Sbjct: 186 VHTHAYQYCVESLGLDEGEIFNMYREVPAVARKAEWALPFTQHLADPQFHTGTAENDQKL 245

Query: 186 LTRSLRFL 193
           L   + F 
Sbjct: 246 LRELIAFY 253


>gi|161525957|ref|YP_001580969.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           multivorans ATCC 17616]
 gi|160343386|gb|ABX16472.1| Ribonucleoside-diphosphate reductase [Burkholderia multivorans ATCC
           17616]
          Length = 396

 Score =  270 bits (692), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 107/194 (55%), Positives = 138/194 (71%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +       P    E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ 
Sbjct: 45  VPPQASAVPAGGSEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEIN 104

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQ
Sbjct: 105 MSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQ 164

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYI+ SLGLDEGE+FN Y EVPSI AK  + + +  TL+ P+F      
Sbjct: 165 AFEEAIHTHAYQYIVESLGLDEGEIFNAYHEVPSIRAKDEFLIPFIHTLTDPAFKTGTLE 224

Query: 181 RRSRILTRSLRFLC 194
              ++L   + F C
Sbjct: 225 ADQKLLKSLIVFAC 238


>gi|307731037|ref|YP_003908261.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1003]
 gi|307585572|gb|ADN58970.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1003]
          Length = 411

 Score =  270 bits (692), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 111/201 (55%), Positives = 141/201 (70%), Gaps = 7/201 (3%)

Query: 1   MANNTGLSPIQAG-------EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNH 53
            AN+  ++P+  G       E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NH
Sbjct: 53  FANDIAVAPVARGAGTAAVSEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANH 112

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           WMP EV M  D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PEC
Sbjct: 113 WMPQEVNMSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPEC 172

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
           RQ+LLRQAFEEA+H+H +QYI+ SLGLDEGE+FN Y EVPSI AK  + + Y   L+ P 
Sbjct: 173 RQFLLRQAFEEAIHTHAYQYIVESLGLDEGEIFNAYHEVPSIRAKDEFLIPYINVLTDPG 232

Query: 174 FHYWNKRRRSRILTRSLRFLC 194
           F          +L   + F C
Sbjct: 233 FKTGTLETDQTLLRSLIVFAC 253


>gi|325519933|gb|EGC99191.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia sp.
           TJI49]
          Length = 403

 Score =  270 bits (691), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 108/194 (55%), Positives = 139/194 (71%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +A      P    E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ 
Sbjct: 52  VAPQASAVPAGGSEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEIN 111

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQ
Sbjct: 112 MSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQ 171

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYI+ SLGLDEGE+FN Y EVPSI AK  + + +  TL+ P+F      
Sbjct: 172 AFEEAIHTHAYQYIVESLGLDEGEIFNAYHEVPSIRAKDEFLIPFIHTLTDPAFKTGTLE 231

Query: 181 RRSRILTRSLRFLC 194
              ++L   + F C
Sbjct: 232 ADQKLLKSLIVFAC 245


>gi|53804295|ref|YP_114081.1| ribonucleotide-diphosphate reductase subunit beta [Methylococcus
           capsulatus str. Bath]
 gi|53758056|gb|AAU92347.1| ribonucleoside-diphosphate reductase, beta subunit [Methylococcus
           capsulatus str. Bath]
          Length = 403

 Score =  270 bits (691), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 115/192 (59%), Positives = 150/192 (78%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
              TGL  I+ G +R+ VDDKR++N R+D+NQL+P KY WAW+KYL AC NHWMP E+ M
Sbjct: 53  TGATGLENIEMGARRIQVDDKRIINCRADLNQLVPFKYQWAWQKYLDACANHWMPQEINM 112

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D+ALWKS +GLT DER++IKRNLGFF++++SLVANN+VLA+YRH++NPECRQYLLRQA
Sbjct: 113 NADIALWKSADGLTPDERIIIKRNLGFFSTADSLVANNLVLAVYRHITNPECRQYLLRQA 172

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRR 181
           FEEA+H+H +QY++ SLGLDEGE+FNMYREVP++  KA WAL +TQ L+ P F       
Sbjct: 173 FEEALHTHAYQYVVESLGLDEGEVFNMYREVPAVARKAEWALPFTQYLADPYFKTGTPEN 232

Query: 182 RSRILTRSLRFL 193
             ++L   + F 
Sbjct: 233 DQKLLRELIAFY 244


>gi|292490774|ref|YP_003526213.1| ribonucleoside-diphosphate reductase [Nitrosococcus halophilus Nc4]
 gi|291579369|gb|ADE13826.1| Ribonucleoside-diphosphate reductase [Nitrosococcus halophilus Nc4]
          Length = 415

 Score =  270 bits (690), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 115/188 (61%), Positives = 147/188 (78%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           G+  I+ G  R+ VDDKR++N R+D+NQL+P KY WAWEKYL+ C NHWMP E+ M  D+
Sbjct: 69  GIENIEMGAARIQVDDKRIINCRADLNQLVPFKYHWAWEKYLNGCANHWMPQEINMNADI 128

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWKS +GLT+DER +IKRNLGFF +++SLVANN+VLA+YRH++NPECRQYLLRQAFEEA
Sbjct: 129 ALWKSADGLTEDERTIIKRNLGFFVTADSLVANNLVLAVYRHITNPECRQYLLRQAFEEA 188

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           VH+H +QY + SLGLDEGE+FNMYREVP++  KA WAL +TQ L+ P FH        ++
Sbjct: 189 VHTHAYQYCVESLGLDEGEIFNMYREVPAVARKAEWALPFTQYLADPQFHTGTDENDQKL 248

Query: 186 LTRSLRFL 193
           L   + F 
Sbjct: 249 LRELIAFY 256


>gi|189349324|ref|YP_001944952.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           multivorans ATCC 17616]
 gi|221213238|ref|ZP_03586213.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD1]
 gi|189333346|dbj|BAG42416.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
           multivorans ATCC 17616]
 gi|221166690|gb|EED99161.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD1]
          Length = 403

 Score =  269 bits (688), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 107/194 (55%), Positives = 138/194 (71%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +       P    E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ 
Sbjct: 52  VPPQASAVPAGGSEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEIN 111

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQ
Sbjct: 112 MSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQ 171

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYI+ SLGLDEGE+FN Y EVPSI AK  + + +  TL+ P+F      
Sbjct: 172 AFEEAIHTHAYQYIVESLGLDEGEIFNAYHEVPSIRAKDEFLIPFIHTLTDPAFKTGTLE 231

Query: 181 RRSRILTRSLRFLC 194
              ++L   + F C
Sbjct: 232 ADQKLLKSLIVFAC 245


>gi|254253304|ref|ZP_04946622.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia
           dolosa AUO158]
 gi|124895913|gb|EAY69793.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia
           dolosa AUO158]
          Length = 403

 Score =  269 bits (687), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 107/194 (55%), Positives = 138/194 (71%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +       P    E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ 
Sbjct: 52  VPPQASAIPAGGSEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEIN 111

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQ
Sbjct: 112 MSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQ 171

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYI+ SLGLDEGE+FN Y EVPSI AK  + + +  TL+ P+F      
Sbjct: 172 AFEEAIHTHAYQYIVESLGLDEGEIFNAYHEVPSIRAKDEFLIPFIHTLTDPAFKTGTLE 231

Query: 181 RRSRILTRSLRFLC 194
              ++L   + F C
Sbjct: 232 ADQKLLKSLIVFAC 245


>gi|226945386|ref|YP_002800459.1| ribonucleotide-diphosphate reductase subunit beta [Azotobacter
           vinelandii DJ]
 gi|226720313|gb|ACO79484.1| Ribonucleoside-diphosphate reductase beta subunit [Azotobacter
           vinelandii DJ]
          Length = 416

 Score =  268 bits (686), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 108/190 (56%), Positives = 146/190 (76%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
            GL  ++    RV VD+KRM+N R+D+NQL+P KY WAW+KYL  C NHWMP E+ M  D
Sbjct: 69  EGLEDLEGAAARVRVDEKRMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEINMNAD 128

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           +ALWKS +GLT+DER +IKRNLGFF++++SLVANN+ LAIYR ++NPECRQY+LRQAFEE
Sbjct: 129 IALWKSADGLTEDERRIIKRNLGFFSTADSLVANNLALAIYRLITNPECRQYILRQAFEE 188

Query: 125 AVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           A+H+H +QY I SLG+DEGE+FNMY E+PS+  KA+W L+YT+++S P+F         +
Sbjct: 189 AIHTHAYQYCIESLGMDEGEIFNMYHEIPSVAKKASWGLKYTRSISDPTFDTGTPETDRQ 248

Query: 185 ILTRSLRFLC 194
           +L   + + C
Sbjct: 249 LLRNLIAYYC 258


>gi|221202418|ref|ZP_03575450.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD2M]
 gi|221208122|ref|ZP_03581127.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD2]
 gi|221172025|gb|EEE04467.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD2]
 gi|221177695|gb|EEE10110.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           multivorans CGD2M]
          Length = 372

 Score =  268 bits (686), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 107/194 (55%), Positives = 138/194 (71%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +       P    E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ 
Sbjct: 21  VPPQASAVPAGGSEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEIN 80

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQ
Sbjct: 81  MSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQ 140

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYI+ SLGLDEGE+FN Y EVPSI AK  + + +  TL+ P+F      
Sbjct: 141 AFEEAIHTHAYQYIVESLGLDEGEIFNAYHEVPSIRAKDEFLIPFIHTLTDPAFKTGTLE 200

Query: 181 RRSRILTRSLRFLC 194
              ++L   + F C
Sbjct: 201 ADQKLLKSLIVFAC 214


>gi|110833571|ref|YP_692430.1| ribonucleotide-diphosphate reductase subunit beta [Alcanivorax
           borkumensis SK2]
 gi|110646682|emb|CAL16158.1| ribonucleoside reductase, beta subunit [Alcanivorax borkumensis
           SK2]
          Length = 430

 Score =  267 bits (684), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 112/189 (59%), Positives = 144/189 (76%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           G++ ++    RV VDDKRM+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  DL
Sbjct: 84  GVAELEGAAGRVEVDDKRMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMNADL 143

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWK  +GLTDDER ++KRNLGFFA+++SLVANN+VLAIYR ++NPECRQY+LRQ+FEEA
Sbjct: 144 ALWKKADGLTDDERRIVKRNLGFFATADSLVANNLVLAIYRLITNPECRQYILRQSFEEA 203

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMY+E+PS+  KA W +QYT+ LS P F          +
Sbjct: 204 IHTHAYQYCIESLGMDEGEIFNMYQEIPSVAKKAQWGIQYTRDLSDPEFTTGTPETDKAL 263

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 264 LENLIAFYC 272


>gi|289208615|ref|YP_003460681.1| ribonucleoside-diphosphate reductase [Thioalkalivibrio sp. K90mix]
 gi|288944246|gb|ADC71945.1| Ribonucleoside-diphosphate reductase [Thioalkalivibrio sp. K90mix]
          Length = 412

 Score =  267 bits (684), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 110/189 (58%), Positives = 147/189 (77%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
           TGL  ++ G +R+ VDDK+++N  +D+NQL+P KY WAW+KYL  C NHWMP E+ M  D
Sbjct: 65  TGLEDLEMGAERIRVDDKKIINCHADLNQLVPFKYKWAWQKYLDGCANHWMPQEINMNAD 124

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           +ALWK  NGLT+DER ++KRNLGFF++++SLVANN+VLA+YRH++NPECRQYLLRQAFEE
Sbjct: 125 IALWKDPNGLTEDERTIVKRNLGFFSTADSLVANNLVLAVYRHITNPECRQYLLRQAFEE 184

Query: 125 AVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           A+H+H +QY + SLGLDEGE+FNMYREVPS+  KA WAL +T+ L+ P+F         +
Sbjct: 185 ALHTHAYQYCVESLGLDEGEIFNMYREVPSVATKAEWALPFTKHLADPNFRTGTPEADQK 244

Query: 185 ILTRSLRFL 193
           +L   + F 
Sbjct: 245 LLRELIAFY 253


>gi|88812072|ref|ZP_01127324.1| ribonucleotide-diphosphate reductase beta subunit [Nitrococcus
           mobilis Nb-231]
 gi|88790576|gb|EAR21691.1| ribonucleotide-diphosphate reductase beta subunit [Nitrococcus
           mobilis Nb-231]
          Length = 370

 Score =  267 bits (683), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 110/192 (57%), Positives = 147/192 (76%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           ++ TGL   + G  R+ VDDKR++N R+D+NQL+P KY WAWEKYL    NHWMP E+PM
Sbjct: 20  SSPTGLDAPERGAARIRVDDKRIINCRADLNQLVPFKYHWAWEKYLQGSANHWMPQEIPM 79

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D+ LWK ++GLT+DER ++KR+LGFF++++SLVANN+VLA+YRH++NPECRQYLLRQA
Sbjct: 80  GRDIELWKRRDGLTEDERTIVKRSLGFFSTADSLVANNLVLAVYRHITNPECRQYLLRQA 139

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRR 181
           FEEA+H+H +QY+I SL +DEGE+FNMYREVPS+  KA WAL +T++L  P F       
Sbjct: 140 FEEALHTHAYQYVIESLAMDEGEVFNMYREVPSVARKAEWALPFTESLGDPDFRTGTPAA 199

Query: 182 RSRILTRSLRFL 193
             R+L   + F 
Sbjct: 200 DQRLLRDLIAFY 211


>gi|330811278|ref|YP_004355740.1| Ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327379386|gb|AEA70736.1| Ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 415

 Score =  266 bits (680), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 106/191 (55%), Positives = 142/191 (74%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
             GL+ ++    RV VD+KRM+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  
Sbjct: 67  AEGLAELEGASARVAVDEKRMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTA 126

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWK+  GLTDDER ++ RNLGFF++++SLVANN+VLA+YR ++NPECRQY+LRQAFE
Sbjct: 127 DIALWKNPEGLTDDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFE 186

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QY I SL +DEGE+FNMY E+PS+  KA W L+YT+++S P F         
Sbjct: 187 EAIHTHAYQYCIESLAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTPDTDK 246

Query: 184 RILTRSLRFLC 194
            +L   + + C
Sbjct: 247 ELLRNLIAYYC 257


>gi|83719302|ref|YP_441701.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           thailandensis E264]
 gi|83653127|gb|ABC37190.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           thailandensis E264]
          Length = 377

 Score =  265 bits (679), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 109/194 (56%), Positives = 139/194 (71%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
            A     S   A E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ 
Sbjct: 26  FAVAPNASAAVASEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEIN 85

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQ
Sbjct: 86  MSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQ 145

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYI+ SLGLDEGE+FN Y EVPSI AK  + + +  TL+ P+F      
Sbjct: 146 AFEEAIHTHAYQYIVESLGLDEGEIFNAYHEVPSIRAKDEFLIPFIHTLTDPAFKTGTLE 205

Query: 181 RRSRILTRSLRFLC 194
              ++L   + F C
Sbjct: 206 ADQKLLKSLIVFAC 219


>gi|134294683|ref|YP_001118418.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           vietnamiensis G4]
 gi|134137840|gb|ABO53583.1| Ribonucleoside-diphosphate reductase [Burkholderia vietnamiensis
           G4]
          Length = 403

 Score =  265 bits (679), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 106/194 (54%), Positives = 137/194 (70%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +       P    E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ 
Sbjct: 52  VPPQAPAVPAGGSEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEIN 111

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQ
Sbjct: 112 MSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQ 171

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYI+ SLGLDEGE+FN Y EV SI AK  + + +  TL+ P+F      
Sbjct: 172 AFEEAIHTHAYQYIVESLGLDEGEIFNAYHEVASIRAKDEFLIPFIHTLTDPAFKTGTLE 231

Query: 181 RRSRILTRSLRFLC 194
              ++L   + F C
Sbjct: 232 ADQKLLKSLIVFAC 245


>gi|78065156|ref|YP_367925.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia sp.
           383]
 gi|77965901|gb|ABB07281.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. 383]
          Length = 403

 Score =  265 bits (679), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 106/194 (54%), Positives = 137/194 (70%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +       P    E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ 
Sbjct: 52  VPPQASAVPAGGSEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEIN 111

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQ
Sbjct: 112 MSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQ 171

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYI+ SLGLDEGE+FN Y EV SI AK  + + +  TL+ P+F      
Sbjct: 172 AFEEAIHTHAYQYIVESLGLDEGEIFNAYHEVTSIRAKDEFLIPFIHTLTDPAFKTGTLE 231

Query: 181 RRSRILTRSLRFLC 194
              ++L   + F C
Sbjct: 232 ADQKLLKSLIVFAC 245


>gi|115350552|ref|YP_772391.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           ambifaria AMMD]
 gi|172059584|ref|YP_001807236.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           ambifaria MC40-6]
 gi|115280540|gb|ABI86057.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria AMMD]
 gi|171992101|gb|ACB63020.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria
           MC40-6]
          Length = 403

 Score =  265 bits (679), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 106/194 (54%), Positives = 137/194 (70%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +       P    E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ 
Sbjct: 52  VPPQASAVPAAGSEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEIN 111

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQ
Sbjct: 112 MSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQ 171

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYI+ SLGLDEGE+FN Y EV SI AK  + + +  TL+ P+F      
Sbjct: 172 AFEEAIHTHAYQYIVESLGLDEGEIFNAYHEVTSIRAKDEFLIPFIHTLTDPAFKTGTLE 231

Query: 181 RRSRILTRSLRFLC 194
              ++L   + F C
Sbjct: 232 ADQKLLKSLIVFAC 245


>gi|170699976|ref|ZP_02891003.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria
           IOP40-10]
 gi|170135124|gb|EDT03425.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria
           IOP40-10]
          Length = 403

 Score =  265 bits (679), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 106/194 (54%), Positives = 137/194 (70%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +       P    E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ 
Sbjct: 52  VPPQASAVPAAGSEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEIN 111

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQ
Sbjct: 112 MSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQ 171

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYI+ SLGLDEGE+FN Y EV SI AK  + + +  TL+ P+F      
Sbjct: 172 AFEEAIHTHAYQYIVESLGLDEGEIFNAYHEVTSIRAKDEFLIPFIHTLTDPAFKTGTLE 231

Query: 181 RRSRILTRSLRFLC 194
              ++L   + F C
Sbjct: 232 ADQKLLKSLIVFAC 245


>gi|171318520|ref|ZP_02907672.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria MEX-5]
 gi|171096306|gb|EDT41212.1| Ribonucleoside-diphosphate reductase [Burkholderia ambifaria MEX-5]
          Length = 403

 Score =  265 bits (678), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 106/194 (54%), Positives = 137/194 (70%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +       P    E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ 
Sbjct: 52  VPPQASAVPAGGSEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEIN 111

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQ
Sbjct: 112 MSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQ 171

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYI+ SLGLDEGE+FN Y EV SI AK  + + +  TL+ P+F      
Sbjct: 172 AFEEAIHTHAYQYIVESLGLDEGEIFNAYHEVTSIRAKDEFLIPFIHTLTDPAFKTGTLE 231

Query: 181 RRSRILTRSLRFLC 194
              ++L   + F C
Sbjct: 232 ADQKLLKSLIVFAC 245


>gi|107021673|ref|YP_620000.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           cenocepacia AU 1054]
 gi|116688619|ref|YP_834242.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           cenocepacia HI2424]
 gi|105891862|gb|ABF75027.1| Ribonucleoside-diphosphate reductase [Burkholderia cenocepacia AU
           1054]
 gi|116646708|gb|ABK07349.1| Ribonucleoside-diphosphate reductase [Burkholderia cenocepacia
           HI2424]
          Length = 382

 Score =  265 bits (678), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 106/194 (54%), Positives = 137/194 (70%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +       P    E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ 
Sbjct: 31  VPPQASAVPAGGTEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEIN 90

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQ
Sbjct: 91  MSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQ 150

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYI+ SLGLDEGE+FN Y EV SI AK  + + +  TL+ P+F      
Sbjct: 151 AFEEAIHTHAYQYIVESLGLDEGEIFNAYHEVTSIRAKDEFLIPFIHTLTDPAFKTGTLE 210

Query: 181 RRSRILTRSLRFLC 194
              ++L   + F C
Sbjct: 211 ADQKLLKSLIVFAC 224


>gi|170695324|ref|ZP_02886470.1| Ribonucleoside-diphosphate reductase [Burkholderia graminis C4D1M]
 gi|170139724|gb|EDT07906.1| Ribonucleoside-diphosphate reductase [Burkholderia graminis C4D1M]
          Length = 414

 Score =  265 bits (678), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 107/181 (59%), Positives = 133/181 (73%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+ALWK  NG
Sbjct: 76  EARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEVNMSRDIALWKDPNG 135

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           LT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +QY
Sbjct: 136 LTEDERRVVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQY 195

Query: 134 IITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           I+ SLGLDEGE+FN Y EVPSI AK  + + Y   L+ P F          +L   + F 
Sbjct: 196 IVESLGLDEGEIFNAYHEVPSIRAKDEFLIPYINVLTDPGFKTGTLETDQTLLRSLIVFA 255

Query: 194 C 194
           C
Sbjct: 256 C 256


>gi|121598515|ref|YP_991780.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           mallei SAVP1]
 gi|124385654|ref|YP_001027273.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           mallei NCTC 10229]
 gi|126439848|ref|YP_001060484.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 668]
 gi|126451145|ref|YP_001082790.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           mallei NCTC 10247]
 gi|126453692|ref|YP_001067748.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 1106a]
 gi|134280207|ref|ZP_01766918.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 305]
 gi|166998593|ref|ZP_02264451.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei PRL-20]
 gi|167721297|ref|ZP_02404533.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei DM98]
 gi|167740266|ref|ZP_02413040.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 14]
 gi|167817486|ref|ZP_02449166.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 91]
 gi|167847373|ref|ZP_02472881.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei B7210]
 gi|167895962|ref|ZP_02483364.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 7894]
 gi|167904346|ref|ZP_02491551.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei NCTC 13177]
 gi|167912606|ref|ZP_02499697.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 112]
 gi|217420440|ref|ZP_03451945.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 576]
 gi|226196790|ref|ZP_03792369.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei Pakistan 9]
 gi|237813879|ref|YP_002898330.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei MSHR346]
 gi|238561262|ref|ZP_00442338.2| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei GB8 horse 4]
 gi|242316188|ref|ZP_04815204.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1106b]
 gi|254178822|ref|ZP_04885476.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei ATCC 10399]
 gi|254199038|ref|ZP_04905453.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei S13]
 gi|254202774|ref|ZP_04909137.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei FMH]
 gi|254259655|ref|ZP_04950709.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1710a]
 gi|254299327|ref|ZP_04966777.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 406e]
 gi|121227325|gb|ABM49843.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei SAVP1]
 gi|124293674|gb|ABN02943.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei NCTC 10229]
 gi|126219341|gb|ABN82847.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 668]
 gi|126227334|gb|ABN90874.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1106a]
 gi|126244015|gb|ABO07108.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei NCTC 10247]
 gi|134248214|gb|EBA48297.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 305]
 gi|147747021|gb|EDK54098.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei FMH]
 gi|157808756|gb|EDO85926.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 406e]
 gi|160694736|gb|EDP84744.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei ATCC 10399]
 gi|169656868|gb|EDS88265.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei S13]
 gi|217395852|gb|EEC35869.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 576]
 gi|225931050|gb|EEH27058.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei Pakistan 9]
 gi|237506031|gb|ACQ98349.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei MSHR346]
 gi|238524965|gb|EEP88395.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei GB8 horse 4]
 gi|242139427|gb|EES25829.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1106b]
 gi|243065276|gb|EES47462.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei PRL-20]
 gi|254218344|gb|EET07728.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1710a]
          Length = 403

 Score =  265 bits (677), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 109/194 (56%), Positives = 139/194 (71%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
            A     S   A E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ 
Sbjct: 52  FAVAPNASAAVASEARVNVADKRIINGKTDVNQLVPFKYKWAWEKYLAGCANHWMPQEIN 111

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQ
Sbjct: 112 MSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQ 171

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYI+ SLGLDEGE+FN Y EVPSI AK  + + +  TL+ P+F      
Sbjct: 172 AFEEAIHTHAYQYIVESLGLDEGEIFNAYHEVPSIRAKDEFLIPFIHTLTDPAFTTGTLE 231

Query: 181 RRSRILTRSLRFLC 194
              ++L   + F C
Sbjct: 232 ADQKLLKSLIVFAC 245


>gi|76808925|ref|YP_334881.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 1710b]
 gi|254208116|ref|ZP_04914466.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei JHU]
 gi|76578378|gb|ABA47853.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
           pseudomallei 1710b]
 gi|147752010|gb|EDK59077.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei JHU]
          Length = 376

 Score =  265 bits (677), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 109/194 (56%), Positives = 139/194 (71%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
            A     S   A E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ 
Sbjct: 25  FAVAPNASAAVASEARVNVADKRIINGKTDVNQLVPFKYKWAWEKYLAGCANHWMPQEIN 84

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQ
Sbjct: 85  MSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQ 144

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYI+ SLGLDEGE+FN Y EVPSI AK  + + +  TL+ P+F      
Sbjct: 145 AFEEAIHTHAYQYIVESLGLDEGEIFNAYHEVPSIRAKDEFLIPFIHTLTDPAFTTGTLE 204

Query: 181 RRSRILTRSLRFLC 194
              ++L   + F C
Sbjct: 205 ADQKLLKSLIVFAC 218


>gi|170731918|ref|YP_001763865.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           cenocepacia MC0-3]
 gi|169815160|gb|ACA89743.1| Ribonucleoside-diphosphate reductase [Burkholderia cenocepacia
           MC0-3]
          Length = 403

 Score =  265 bits (677), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 106/194 (54%), Positives = 137/194 (70%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +       P    E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ 
Sbjct: 52  VPPQASAVPAGGTEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEIN 111

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQ
Sbjct: 112 MSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQ 171

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYI+ SLGLDEGE+FN Y EV SI AK  + + +  TL+ P+F      
Sbjct: 172 AFEEAIHTHAYQYIVESLGLDEGEIFNAYHEVTSIRAKDEFLIPFIHTLTDPAFKTGTLE 231

Query: 181 RRSRILTRSLRFLC 194
              ++L   + F C
Sbjct: 232 ADQKLLKSLIVFAC 245


>gi|206561765|ref|YP_002232530.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           cenocepacia J2315]
 gi|254246390|ref|ZP_04939711.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia
           cenocepacia PC184]
 gi|124871166|gb|EAY62882.1| ribonucleotide-diphosphate reductase beta subunit [Burkholderia
           cenocepacia PC184]
 gi|198037807|emb|CAR53751.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
           cenocepacia J2315]
          Length = 403

 Score =  265 bits (677), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 106/194 (54%), Positives = 137/194 (70%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +       P    E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ 
Sbjct: 52  VPPQASAVPAGGTEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEIN 111

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQ
Sbjct: 112 MSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQ 171

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYI+ SLGLDEGE+FN Y EV SI AK  + + +  TL+ P+F      
Sbjct: 172 AFEEAIHTHAYQYIVESLGLDEGEIFNAYHEVTSIRAKDEFLIPFIHTLTDPAFKTGTLE 231

Query: 181 RRSRILTRSLRFLC 194
              ++L   + F C
Sbjct: 232 ADQKLLKSLIVFAC 245


>gi|148546452|ref|YP_001266554.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           putida F1]
 gi|148510510|gb|ABQ77370.1| Ribonucleoside-diphosphate reductase [Pseudomonas putida F1]
          Length = 415

 Score =  264 bits (676), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 106/191 (55%), Positives = 144/191 (75%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
             GL+ ++    RV VD+KRM+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  
Sbjct: 67  AEGLAELEGSSARVAVDEKRMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTA 126

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWKS++GLT+DER ++ RNLGFF++++SLVANN+ LA+YR ++NPECRQY+LRQAFE
Sbjct: 127 DIALWKSQDGLTEDERRIVMRNLGFFSTADSLVANNLALAVYRLITNPECRQYILRQAFE 186

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QY I SLG+DEGE+FNMY E+PS+  KA W L+YT+ +S P F+        
Sbjct: 187 EAIHTHAYQYCIESLGMDEGEIFNMYHEIPSVAKKAAWGLKYTRAISDPEFNTGTVETDK 246

Query: 184 RILTRSLRFLC 194
            +L   + + C
Sbjct: 247 ELLRNLIAYYC 257


>gi|323527395|ref|YP_004229548.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1001]
 gi|323384397|gb|ADX56488.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1001]
          Length = 414

 Score =  264 bits (676), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 107/181 (59%), Positives = 134/181 (74%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+ALWK  NG
Sbjct: 76  EARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEVNMSRDIALWKDPNG 135

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           LT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +QY
Sbjct: 136 LTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQY 195

Query: 134 IITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           I+ SLGLDEGE+FN Y EVPSI AK  + + Y   L+ P+F          +L   + F 
Sbjct: 196 IVESLGLDEGEIFNAYHEVPSIRAKDEFLIPYIHVLTDPAFKTGTLEADQTLLRSLIVFA 255

Query: 194 C 194
           C
Sbjct: 256 C 256


>gi|167580513|ref|ZP_02373387.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           thailandensis TXDOH]
 gi|167618621|ref|ZP_02387252.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           thailandensis Bt4]
 gi|257137870|ref|ZP_05586132.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           thailandensis E264]
          Length = 350

 Score =  264 bits (676), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 111/194 (57%), Positives = 141/194 (72%), Gaps = 2/194 (1%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           MA N   S   A E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ 
Sbjct: 1   MAPNA--SAAVASEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEIN 58

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQ
Sbjct: 59  MSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQ 118

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYI+ SLGLDEGE+FN Y EVPSI AK  + + +  TL+ P+F      
Sbjct: 119 AFEEAIHTHAYQYIVESLGLDEGEIFNAYHEVPSIRAKDEFLIPFIHTLTDPAFKTGTLE 178

Query: 181 RRSRILTRSLRFLC 194
              ++L   + F C
Sbjct: 179 ADQKLLKSLIVFAC 192


>gi|158341282|ref|YP_001522354.1| ribonucleotide-diphosphate reductase subunit beta [Acaryochloris
           marina MBIC11017]
 gi|158311523|gb|ABW33134.1| ribonucleoside-diphosphate reductase, beta subunit [Acaryochloris
           marina MBIC11017]
          Length = 384

 Score =  264 bits (675), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 102/186 (54%), Positives = 137/186 (73%)

Query: 9   PIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           P     +R+NV DKR++N ++DVNQL+P KY WAW+KYL+ C NHWMP E+ M  D+ALW
Sbjct: 41  PETQPPRRINVADKRIINGQTDVNQLVPFKYQWAWDKYLAGCANHWMPQEINMSRDIALW 100

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           K+ +GLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQYLLRQAFEEA+H+
Sbjct: 101 KTTDGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHT 160

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
           H +QYI+ SLGLDEGE+FN YREV  I  K  + + + +TL+ P+F         ++L  
Sbjct: 161 HAYQYIVESLGLDEGEIFNAYREVDCIREKDEFLIPFVETLTDPTFETGTPENDQKLLKS 220

Query: 189 SLRFLC 194
            + F C
Sbjct: 221 LIAFSC 226


>gi|70731866|ref|YP_261608.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           fluorescens Pf-5]
 gi|68346165|gb|AAY93771.1| ribonucleoside-diphosphate reductase, beta subunit, putative
           [Pseudomonas fluorescens Pf-5]
          Length = 415

 Score =  264 bits (675), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 106/191 (55%), Positives = 142/191 (74%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
             GL+ ++    RV VD+KRM+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  
Sbjct: 67  AEGLAELEGSSARVAVDEKRMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTA 126

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWK+  GLTDDER ++ RNLGFF++++SLVANN+VLA+YR ++NPECRQY+LRQAFE
Sbjct: 127 DIALWKNPEGLTDDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFE 186

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QY I SL +DEGE+FNMY E+PS+  KA W L+YT+++S P F         
Sbjct: 187 EAIHTHAYQYCIESLAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTVDTDK 246

Query: 184 RILTRSLRFLC 194
            +L   + + C
Sbjct: 247 ELLRNLIAYYC 257


>gi|77460516|ref|YP_350023.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           fluorescens Pf0-1]
 gi|77384519|gb|ABA76032.1| ribonucleoside-diphosphate reductase beta chain [Pseudomonas
           fluorescens Pf0-1]
          Length = 416

 Score =  264 bits (675), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 106/191 (55%), Positives = 142/191 (74%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
             GL+ ++    RV VD+KRM+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  
Sbjct: 68  AEGLAELEGSAARVAVDEKRMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTA 127

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWK+  GLTDDER ++ RNLGFF++++SLVANN+ LA+YR ++NPECRQY+LRQAFE
Sbjct: 128 DIALWKNPEGLTDDERRIVMRNLGFFSTADSLVANNLALAVYRLITNPECRQYILRQAFE 187

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QY I SLG+DEGE+FNMY E+PS+  KA W L+YT+ +S P F+        
Sbjct: 188 EAIHTHAYQYCIESLGMDEGEIFNMYHEIPSVAKKAAWGLKYTRAISDPEFNTGTVETDK 247

Query: 184 RILTRSLRFLC 194
            +L   + + C
Sbjct: 248 ELLRNLIAYYC 258


>gi|295677726|ref|YP_003606250.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1002]
 gi|295437569|gb|ADG16739.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. CCGE1002]
          Length = 411

 Score =  264 bits (674), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 109/201 (54%), Positives = 140/201 (69%), Gaps = 7/201 (3%)

Query: 1   MANNTGLSPIQAGEK-------RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNH 53
            AN+  ++P+            RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NH
Sbjct: 53  FANDIAVAPVAHAGNAAAASEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANH 112

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           WMP EV M  D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PEC
Sbjct: 113 WMPQEVNMSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPEC 172

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
           RQ+LLRQAFEEA+H+H +QYI+ SLGLDEGE+FN Y EVPSI AK  + + Y   L+ P+
Sbjct: 173 RQFLLRQAFEEAIHTHAYQYIVESLGLDEGEIFNAYHEVPSIRAKDEFLIPYIHVLTDPA 232

Query: 174 FHYWNKRRRSRILTRSLRFLC 194
           F          +L   + F C
Sbjct: 233 FKTGTLEADQTLLRSLIVFAC 253


>gi|209521089|ref|ZP_03269819.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. H160]
 gi|209498472|gb|EDZ98597.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. H160]
          Length = 411

 Score =  264 bits (674), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 109/201 (54%), Positives = 140/201 (69%), Gaps = 7/201 (3%)

Query: 1   MANNTGLSPIQAGEK-------RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNH 53
            AN+  ++P+            RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NH
Sbjct: 53  FANDIAVAPVAHAGNAAAASEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANH 112

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           WMP EV M  D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PEC
Sbjct: 113 WMPQEVNMSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPEC 172

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
           RQ+LLRQAFEEA+H+H +QYI+ SLGLDEGE+FN Y EVPSI AK  + + Y   L+ P+
Sbjct: 173 RQFLLRQAFEEAIHTHAYQYIVESLGLDEGEIFNAYHEVPSIRAKDEFLIPYIHVLTDPA 232

Query: 174 FHYWNKRRRSRILTRSLRFLC 194
           F          +L   + F C
Sbjct: 233 FKTGTLEADQTLLRSLIVFAC 253


>gi|167825888|ref|ZP_02457359.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei 9]
 gi|167924622|ref|ZP_02511713.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei BCC215]
 gi|254180586|ref|ZP_04887184.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1655]
 gi|254190977|ref|ZP_04897483.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei Pasteur 52237]
 gi|157938651|gb|EDO94321.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei Pasteur 52237]
 gi|184211125|gb|EDU08168.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           pseudomallei 1655]
          Length = 372

 Score =  264 bits (674), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 109/194 (56%), Positives = 139/194 (71%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
            A     S   A E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ 
Sbjct: 21  FAVAPNASAAVASEARVNVADKRIINGKTDVNQLVPFKYKWAWEKYLAGCANHWMPQEIN 80

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQ
Sbjct: 81  MSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQ 140

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYI+ SLGLDEGE+FN Y EVPSI AK  + + +  TL+ P+F      
Sbjct: 141 AFEEAIHTHAYQYIVESLGLDEGEIFNAYHEVPSIRAKDEFLIPFIHTLTDPAFTTGTLE 200

Query: 181 RRSRILTRSLRFLC 194
              ++L   + F C
Sbjct: 201 ADQKLLKSLIVFAC 214


>gi|146308172|ref|YP_001188637.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           mendocina ymp]
 gi|145576373|gb|ABP85905.1| Ribonucleoside-diphosphate reductase [Pseudomonas mendocina ymp]
          Length = 416

 Score =  264 bits (674), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 106/191 (55%), Positives = 146/191 (76%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
             GL  ++    RV V DK+M+NAR+D+NQL+P KY WAW+KYL  C NHWMP EV M  
Sbjct: 68  QEGLDDLEGAAARVQVGDKQMINARADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMNA 127

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWKS +GL++DER ++ RNLGFF++++SLVANN+VLA+YR ++NPECRQY+LRQAFE
Sbjct: 128 DIALWKSTDGLSEDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFE 187

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QY I SLG+DEGE+FNMY E+PS+  KA+W L+YT+++S P+F+        
Sbjct: 188 EAIHTHAYQYCIESLGMDEGEIFNMYHEIPSVAKKASWGLKYTRSISDPTFNTGTPETDR 247

Query: 184 RILTRSLRFLC 194
           + L   + + C
Sbjct: 248 QFLKNLIAYYC 258


>gi|296160506|ref|ZP_06843322.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. Ch1-1]
 gi|295889255|gb|EFG69057.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. Ch1-1]
          Length = 415

 Score =  264 bits (674), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 107/191 (56%), Positives = 134/191 (70%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
           N         E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP EV M  
Sbjct: 67  NAAAGTAAVSEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEVNMSR 126

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFE
Sbjct: 127 DIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFE 186

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QYI+ SLGLDEGE+FN Y EV SI AK  + + Y   L+ P+F         
Sbjct: 187 EAIHTHAYQYIVESLGLDEGEIFNAYHEVSSIRAKDEFLIPYIHVLTDPAFKTGTLEADQ 246

Query: 184 RILTRSLRFLC 194
            +L   + F C
Sbjct: 247 TLLRSLIVFAC 257


>gi|327480258|gb|AEA83568.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           stutzeri DSM 4166]
          Length = 415

 Score =  264 bits (674), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 110/190 (57%), Positives = 148/190 (77%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
            GL+ ++    RV VD+KRM+NAR+D+NQL+P KY WAW+KYL  C NHWMP EV M  D
Sbjct: 68  EGLNELEGEAARVRVDEKRMINARADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMNAD 127

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           +ALWKSK+GL++DER ++KRNLGFF++++SLVANN+VLA YR ++NPECRQY+LRQAFEE
Sbjct: 128 IALWKSKDGLSEDERRIVKRNLGFFSTADSLVANNLVLATYRLITNPECRQYILRQAFEE 187

Query: 125 AVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           A+H+H +QY I SLG+DEGE+FNMY EVPS+  KA+W L+YT+++S P+F         +
Sbjct: 188 AIHTHAYQYCIESLGMDEGEIFNMYHEVPSVAKKASWGLKYTRSISDPTFQTGTPETDKQ 247

Query: 185 ILTRSLRFLC 194
            L   + + C
Sbjct: 248 FLKNLIAYYC 257


>gi|270156779|ref|ZP_06185436.1| ribonucleotide-diphosphate reductase beta subunit [Legionella
           longbeachae D-4968]
 gi|289164772|ref|YP_003454910.1| ribonucleoside-diphosphate reductase, beta subunit [Legionella
           longbeachae NSW150]
 gi|269988804|gb|EEZ95058.1| ribonucleotide-diphosphate reductase beta subunit [Legionella
           longbeachae D-4968]
 gi|288857945|emb|CBJ11805.1| putative ribonucleoside-diphosphate reductase, beta subunit
           [Legionella longbeachae NSW150]
          Length = 366

 Score =  264 bits (674), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 115/193 (59%), Positives = 151/193 (78%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +   TG   ++ G  R++VDDKR++N R+D+NQL+P KY WAW+KYL+AC NHWMP E+ 
Sbjct: 13  LTGATGYESLEMGAARIHVDDKRIINCRADLNQLVPFKYKWAWDKYLTACANHWMPNEIS 72

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK  NGLT+ ERL+IKRNLGFF++++SLVANN+VLA+YRH++NPECRQYLLRQ
Sbjct: 73  MSADVALWKDPNGLTEAERLIIKRNLGFFSTADSLVANNLVLAVYRHITNPECRQYLLRQ 132

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QY+I SLGLDE E+FNMYRE+PS+  KA WAL YTQ+L+  +FH     
Sbjct: 133 AFEEALHTHAYQYVIESLGLDEAEVFNMYREIPSVATKAAWALPYTQSLADETFHTGTVE 192

Query: 181 RRSRILTRSLRFL 193
              R+L   + F 
Sbjct: 193 NDQRLLRDLIAFY 205


>gi|53720599|ref|YP_109585.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           pseudomallei K96243]
 gi|53726102|ref|YP_104055.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           mallei ATCC 23344]
 gi|52211013|emb|CAH37001.1| ribonucleoside-diphosphate reductase beta chain [Burkholderia
           pseudomallei K96243]
 gi|52429525|gb|AAU50118.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           mallei ATCC 23344]
          Length = 350

 Score =  264 bits (674), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 111/194 (57%), Positives = 141/194 (72%), Gaps = 2/194 (1%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           MA N   S   A E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ 
Sbjct: 1   MAPNA--SAAVASEARVNVADKRIINGKTDVNQLVPFKYKWAWEKYLAGCANHWMPQEIN 58

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQ
Sbjct: 59  MSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQ 118

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYI+ SLGLDEGE+FN Y EVPSI AK  + + +  TL+ P+F      
Sbjct: 119 AFEEAIHTHAYQYIVESLGLDEGEIFNAYHEVPSIRAKDEFLIPFIHTLTDPAFTTGTLE 178

Query: 181 RRSRILTRSLRFLC 194
              ++L   + F C
Sbjct: 179 ADQKLLKSLIVFAC 192


>gi|90022104|ref|YP_527931.1| ribonucleotide-diphosphate reductase subunit beta [Saccharophagus
           degradans 2-40]
 gi|89951704|gb|ABD81719.1| Class Ia ribonucleoside-diphosphate reductase beta subunit
           [Saccharophagus degradans 2-40]
          Length = 423

 Score =  263 bits (673), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 109/193 (56%), Positives = 145/193 (75%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           M    GL  ++ G +R+ VDDKRM+N R+D+NQL+P KY WAW+KYL  C NHWMP EV 
Sbjct: 72  MDPTLGLEELEIGAERIEVDDKRMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVN 131

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+A WKS +GL++DER +I R+LG+F++++SLVANN+VLAIYRH++NPE RQYLLRQ
Sbjct: 132 MTADVATWKSPDGLSEDERRIIMRSLGYFSTADSLVANNLVLAIYRHITNPEARQYLLRQ 191

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QY I SLG+DEGE+FNMYREVPS+  KA W++ +TQ +S P+F      
Sbjct: 192 AFEEAIHTHAYQYCIESLGMDEGEVFNMYREVPSVAKKAAWSIAHTQGMSDPTFKTGTPE 251

Query: 181 RRSRILTRSLRFL 193
               +L   + F 
Sbjct: 252 ADQELLRNLIGFY 264


>gi|54294662|ref|YP_127077.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
           pneumophila str. Lens]
 gi|53754494|emb|CAH15978.1| hypothetical protein lpl1739 [Legionella pneumophila str. Lens]
          Length = 367

 Score =  263 bits (673), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 115/193 (59%), Positives = 152/193 (78%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +   TGL  ++ G  R++VDDK+++N R+D+NQL+P KY WAW+KYL+AC NHWMP E+ 
Sbjct: 14  LMGATGLEALEMGAARIHVDDKQIINCRADLNQLVPFKYKWAWDKYLTACANHWMPNEIS 73

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK   GLT+DERL+IKRNLGFF++++SLVANN+VLA+YRH++NPECRQYLLRQ
Sbjct: 74  MSADVALWKDPYGLTEDERLIIKRNLGFFSTADSLVANNLVLAVYRHITNPECRQYLLRQ 133

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYII SLGLDE E+FNMYRE+PS++ KA WAL +TQ+L   +FH     
Sbjct: 134 AFEEALHTHAYQYIIESLGLDEAEVFNMYREIPSVSRKAVWALPFTQSLGDETFHTGTPE 193

Query: 181 RRSRILTRSLRFL 193
              R+L   + F 
Sbjct: 194 NDQRLLRDLIAFY 206


>gi|15596352|ref|NP_249846.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           aeruginosa PAO1]
 gi|107100605|ref|ZP_01364523.1| hypothetical protein PaerPA_01001630 [Pseudomonas aeruginosa PACS2]
 gi|116049087|ref|YP_792111.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|152988648|ref|YP_001349579.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           aeruginosa PA7]
 gi|218892881|ref|YP_002441750.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           aeruginosa LESB58]
 gi|254239525|ref|ZP_04932847.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa 2192]
 gi|296390475|ref|ZP_06879950.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           aeruginosa PAb1]
 gi|313106126|ref|ZP_07792381.1| NrdB, tyrosyl radical-harboring component of class Ia
           ribonucleotide reductase [Pseudomonas aeruginosa 39016]
 gi|9947077|gb|AAG04544.1|AE004545_7 NrdB, tyrosyl radical-harboring component of class Ia
           ribonucleotide reductase [Pseudomonas aeruginosa PAO1]
 gi|115584308|gb|ABJ10323.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126192903|gb|EAZ56966.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa 2192]
 gi|150963806|gb|ABR85831.1| ribonucleoside reductase, small chain [Pseudomonas aeruginosa PA7]
 gi|187939552|gb|ACD38699.1| ribonucleoside reductase small chain [Pseudomonas aeruginosa]
 gi|218773109|emb|CAW28921.1| NrdB, tyrosyl radical-harboring component of class Ia
           ribonucleotide reductase [Pseudomonas aeruginosa LESB58]
 gi|310878883|gb|EFQ37477.1| NrdB, tyrosyl radical-harboring component of class Ia
           ribonucleotide reductase [Pseudomonas aeruginosa 39016]
          Length = 415

 Score =  263 bits (673), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 107/191 (56%), Positives = 145/191 (75%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
             GL  ++    RV V DK+M+NAR+D+NQL+P KY WAW+KYL  C NHWMP EV M  
Sbjct: 67  QEGLDDLEGSAARVQVGDKQMINARADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMNA 126

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWKSK+GL++DER ++ RNLGFF++++SLVANN+VLA+YR ++NPECRQY+LRQAFE
Sbjct: 127 DIALWKSKDGLSEDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFE 186

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QY I SLG+DEGE+FNMY E+PS+  KA+W L+YT+++S P F         
Sbjct: 187 EAIHTHAYQYCIESLGMDEGEIFNMYHEIPSVAKKASWGLKYTRSISDPMFQTGTPETDR 246

Query: 184 RILTRSLRFLC 194
           + L   + + C
Sbjct: 247 QFLRNLIAYYC 257


>gi|146282010|ref|YP_001172163.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           stutzeri A1501]
 gi|145570215|gb|ABP79321.1| ribonucleoside reductase, small chain [Pseudomonas stutzeri A1501]
          Length = 415

 Score =  263 bits (673), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 109/190 (57%), Positives = 148/190 (77%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
            GL+ ++    RV VD+KRM+NAR+D+NQL+P KY WAW+KYL  C NHWMP EV M  D
Sbjct: 68  EGLNELEGEAARVRVDEKRMINARADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMNAD 127

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           +ALWKSK+GL++DER ++KRNLGFF++++SLVANN+VLA YR ++NPECRQY+LRQAFEE
Sbjct: 128 IALWKSKDGLSEDERRIVKRNLGFFSTADSLVANNLVLATYRLITNPECRQYILRQAFEE 187

Query: 125 AVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           A+H+H +QY I SLG+DEGE+FNMY E+PS+  KA+W L+YT+++S P+F         +
Sbjct: 188 AIHTHAYQYCIESLGMDEGEIFNMYHEIPSVAKKASWGLKYTRSISDPTFQTGTPETDKQ 247

Query: 185 ILTRSLRFLC 194
            L   + + C
Sbjct: 248 FLKNLIAYYC 257


>gi|330949820|gb|EGH50080.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae Cit 7]
          Length = 359

 Score =  263 bits (673), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 105/191 (54%), Positives = 141/191 (73%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
             GL+ ++    RV VD+K M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  
Sbjct: 67  AEGLAELEGASARVAVDEKMMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTA 126

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWK+  GLTDDER ++ RNLGFF++++SLVANN+VLA+YR ++NPECRQY+LRQAFE
Sbjct: 127 DIALWKNPEGLTDDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFE 186

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QY I SL +DEGE+FNMY E+PS+  KA W L+YT+++S P F         
Sbjct: 187 EAIHTHAYQYCIESLAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTVETDK 246

Query: 184 RILTRSLRFLC 194
            +L   + + C
Sbjct: 247 ELLRNLIAYYC 257


>gi|33593916|ref|NP_881560.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella
           pertussis Tohama I]
 gi|33598411|ref|NP_886054.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella
           parapertussis 12822]
 gi|33603351|ref|NP_890911.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella
           bronchiseptica RB50]
 gi|33563990|emb|CAE43255.1| ribonucleoside-diphosphate reductase beta chain [Bordetella
           pertussis Tohama I]
 gi|33574540|emb|CAE39187.1| ribonucleoside-diphosphate reductase beta chain [Bordetella
           parapertussis]
 gi|33577475|emb|CAE34740.1| ribonucleoside-diphosphate reductase beta chain [Bordetella
           bronchiseptica RB50]
          Length = 398

 Score =  263 bits (673), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 103/191 (53%), Positives = 134/191 (70%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
              L    A   RV V DKR++N  +DVNQL+P KY WAWEKYL+ C NHWMP E+ M  
Sbjct: 50  AASLGASDATAGRVKVADKRIINGETDVNQLVPFKYKWAWEKYLATCANHWMPQEINMSR 109

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWK+ NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFE
Sbjct: 110 DIALWKNPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFE 169

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QYI+ SL LDE E+FN Y EVPSI AK  + + +   ++ P+FH        
Sbjct: 170 EAIHTHAYQYIVESLDLDEAEIFNAYNEVPSIRAKDEFLIPFIDAIADPNFHTGTPEADQ 229

Query: 184 RILTRSLRFLC 194
           ++L   + F C
Sbjct: 230 KLLKSLIVFAC 240


>gi|82703584|ref|YP_413150.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosospira
           multiformis ATCC 25196]
 gi|82411649|gb|ABB75758.1| Ribonucleoside-diphosphate reductase [Nitrosospira multiformis ATCC
           25196]
          Length = 408

 Score =  263 bits (673), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 106/181 (58%), Positives = 137/181 (75%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
            +RV+V+DKR++N ++DVNQL+P KY WAWEKYL+AC NHWMP E+ M  D+ALWK  NG
Sbjct: 70  HRRVSVEDKRIINCKADVNQLVPFKYKWAWEKYLAACANHWMPQEINMSRDIALWKDPNG 129

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           LT+DER ++KRNLGFF +++SL ANNIVL  YRH++NPECRQYLLRQAFEEA+H+H +QY
Sbjct: 130 LTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHVTNPECRQYLLRQAFEEAIHTHAYQY 189

Query: 134 IITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           I+ SLGLDEGE+FN Y EV SI  K  + + +  TL+ PSF         ++L   + F 
Sbjct: 190 IVESLGLDEGEIFNAYHEVRSIREKDEFLIPFIDTLTDPSFRTGTLEADQKLLKSLIVFA 249

Query: 194 C 194
           C
Sbjct: 250 C 250


>gi|229592166|ref|YP_002874285.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           fluorescens SBW25]
 gi|229364032|emb|CAY51597.1| ribonucleoside-diphosphate reductase beta chain [Pseudomonas
           fluorescens SBW25]
          Length = 416

 Score =  263 bits (672), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 106/191 (55%), Positives = 142/191 (74%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
             GL+ ++    RV VD+KRM+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  
Sbjct: 68  AEGLAELEGSAARVAVDEKRMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTA 127

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWK+  GLTDDER ++ RNLGFF++++SLVANN+VLA+YR ++NPECRQY+LRQAFE
Sbjct: 128 DIALWKNPEGLTDDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFE 187

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QY I SL +DEGE+FNMY E+PS+  KA W L+YT+++S P F         
Sbjct: 188 EAIHTHAYQYCIESLAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTVETDK 247

Query: 184 RILTRSLRFLC 194
            +L   + + C
Sbjct: 248 ELLRNLVAYYC 258


>gi|91785256|ref|YP_560462.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           xenovorans LB400]
 gi|91689210|gb|ABE32410.1| Ribonucleoside-diphosphate reductase [Burkholderia xenovorans
           LB400]
          Length = 411

 Score =  263 bits (672), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 106/181 (58%), Positives = 133/181 (73%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+ALWK  NG
Sbjct: 73  EARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEVNMSRDIALWKDPNG 132

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           LT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +QY
Sbjct: 133 LTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQY 192

Query: 134 IITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           I+ SLGLDEGE+FN Y EV SI AK  + + Y   L+ P+F          +L   + F 
Sbjct: 193 IVESLGLDEGEIFNAYHEVSSIRAKDEFLIPYIHVLTDPAFKTGTLEADQTLLRSLIVFA 252

Query: 194 C 194
           C
Sbjct: 253 C 253


>gi|330504346|ref|YP_004381215.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           mendocina NK-01]
 gi|328918632|gb|AEB59463.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           mendocina NK-01]
          Length = 416

 Score =  263 bits (672), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 106/191 (55%), Positives = 144/191 (75%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
             GL  ++    RV V DK+M+NAR+D+NQL+P KY WAW+KYL  C NHWMP EV M  
Sbjct: 68  QEGLDDLEGASARVQVGDKQMINARADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMNA 127

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWKS +GL++DER ++ RNLGFF++++SLVANN+VLA+YR ++NPECRQY+LRQAFE
Sbjct: 128 DIALWKSTDGLSEDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFE 187

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QY I SLG+DEGE+FNMY E+PS+  KA+W L+YT+++S P F         
Sbjct: 188 EAIHTHAYQYCIESLGMDEGEIFNMYHEIPSVAKKASWGLKYTRSISDPQFQTGTPETDR 247

Query: 184 RILTRSLRFLC 194
           + L   + + C
Sbjct: 248 QFLRNLIAYYC 258


>gi|254496936|ref|ZP_05109775.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
           drancourtii LLAP12]
 gi|254353845|gb|EET12541.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
           drancourtii LLAP12]
          Length = 369

 Score =  262 bits (671), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 120/193 (62%), Positives = 151/193 (78%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +   TG   I+ G  R++VDDKR++N R+D+NQL+P KY WAW+KYLSAC NHWMP E+ 
Sbjct: 13  IVGATGYESIEMGAARIHVDDKRIINCRADLNQLVPFKYTWAWDKYLSACANHWMPNEIS 72

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK  NGLTDDERL+IKRNLGFF++++SLVANN+VLA+YRH++NPECRQYLLRQ
Sbjct: 73  MSADVALWKDPNGLTDDERLIIKRNLGFFSTADSLVANNLVLAVYRHITNPECRQYLLRQ 132

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QY+I SLGLDE E+FNMYRE+PS+  KA WAL YTQ+L   SFH     
Sbjct: 133 AFEEALHTHAYQYVIESLGLDEAEVFNMYREIPSVATKAAWALPYTQSLGDESFHTGTIE 192

Query: 181 RRSRILTRSLRFL 193
              R+L   + F 
Sbjct: 193 NDQRLLRDLIAFY 205


>gi|54297688|ref|YP_124057.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
           pneumophila str. Paris]
 gi|53751473|emb|CAH12891.1| hypothetical protein lpp1739 [Legionella pneumophila str. Paris]
          Length = 367

 Score =  262 bits (671), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 115/193 (59%), Positives = 152/193 (78%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +   TGL  ++ G  R++VDDK+++N R+D+NQL+P KY WAW+KYL+AC NHWMP E+ 
Sbjct: 14  LMGATGLETLEMGAARIHVDDKQIINCRADLNQLVPFKYKWAWDKYLTACANHWMPNEIS 73

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK   GLT+DERL+IKRNLGFF++++SLVANN+VLA+YRH++NPECRQYLLRQ
Sbjct: 74  MSADVALWKDPYGLTEDERLIIKRNLGFFSTADSLVANNLVLAVYRHITNPECRQYLLRQ 133

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYII SLGLDE E+FNMYRE+PS++ KA WAL +TQ+L   +FH     
Sbjct: 134 AFEEALHTHAYQYIIESLGLDEAEVFNMYREIPSVSRKAVWALPFTQSLGDETFHTGTPE 193

Query: 181 RRSRILTRSLRFL 193
              R+L   + F 
Sbjct: 194 NDQRLLRDLIAFY 206


>gi|119504228|ref|ZP_01626308.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma
           proteobacterium HTCC2080]
 gi|119459736|gb|EAW40831.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma
           proteobacterium HTCC2080]
          Length = 419

 Score =  262 bits (671), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 109/189 (57%), Positives = 143/189 (75%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G  RV+VD+K M+N R+D+NQL+P KY WAW+KY+  C NHWMP EV M  D+
Sbjct: 73  GLEELEMGAARVSVDEKAMINCRADLNQLVPFKYDWAWQKYIDGCANHWMPQEVNMTADV 132

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           A WK  +GL+DDER +I R+LG+F++++SLVANN+VLAIYR ++NPECRQYLLRQAFEEA
Sbjct: 133 ATWKDPDGLSDDERRIIMRSLGYFSTADSLVANNLVLAIYRLITNPECRQYLLRQAFEEA 192

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMYREVPS+ AKA W+L  T +LS P+F          +
Sbjct: 193 IHTHAYQYCIESLGMDEGEVFNMYREVPSVAAKATWSLGKTHSLSDPNFRTGTLETDQEL 252

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 253 LRNLIGFYC 261


>gi|325272776|ref|ZP_08139120.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas sp.
           TJI-51]
 gi|324102083|gb|EGB99585.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas sp.
           TJI-51]
          Length = 416

 Score =  262 bits (671), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 106/191 (55%), Positives = 144/191 (75%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
             GL+ ++    RV VD+KRM+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  
Sbjct: 68  AEGLAELEGSSARVAVDEKRMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTA 127

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWKS++GLT+DER ++ RNLGFF++++SLVANN+ LA+YR ++NPECRQY+LRQAFE
Sbjct: 128 DIALWKSQDGLTEDERRIVMRNLGFFSTADSLVANNLALAVYRLITNPECRQYILRQAFE 187

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QY I SLG+DEGE+FNMY E+PS+  KA W L+YT+ +S P F+        
Sbjct: 188 EAIHTHAYQYCIESLGMDEGEIFNMYHEIPSVAKKAAWGLKYTRAISDPEFNTGTVETDK 247

Query: 184 RILTRSLRFLC 194
            +L   + + C
Sbjct: 248 ELLRNLIAYYC 258


>gi|26987912|ref|NP_743337.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           putida KT2440]
 gi|167035231|ref|YP_001670462.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           putida GB-1]
 gi|24982621|gb|AAN66801.1|AE016309_3 ribonucleoside reductase, beta subunit [Pseudomonas putida KT2440]
 gi|166861719|gb|ABZ00127.1| Ribonucleoside-diphosphate reductase [Pseudomonas putida GB-1]
 gi|313497534|gb|ADR58900.1| NrdB [Pseudomonas putida BIRD-1]
          Length = 416

 Score =  262 bits (671), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 106/191 (55%), Positives = 144/191 (75%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
             GL+ ++    RV VD+KRM+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  
Sbjct: 68  AEGLAELEGSSARVAVDEKRMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTA 127

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWKS++GLT+DER ++ RNLGFF++++SLVANN+ LA+YR ++NPECRQY+LRQAFE
Sbjct: 128 DIALWKSQDGLTEDERRIVMRNLGFFSTADSLVANNLALAVYRLITNPECRQYILRQAFE 187

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QY I SLG+DEGE+FNMY E+PS+  KA W L+YT+ +S P F+        
Sbjct: 188 EAIHTHAYQYCIESLGMDEGEIFNMYHEIPSVAKKAAWGLKYTRAISDPEFNTGTVETDK 247

Query: 184 RILTRSLRFLC 194
            +L   + + C
Sbjct: 248 ELLRNLIAYYC 258


>gi|85714830|ref|ZP_01045816.1| ribonucleotide reductase [Nitrobacter sp. Nb-311A]
 gi|85698316|gb|EAQ36187.1| ribonucleotide reductase [Nitrobacter sp. Nb-311A]
          Length = 389

 Score =  262 bits (671), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 140/192 (72%), Positives = 155/192 (80%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           A+ TGL  I  G  RV VDDKRM+NAR+DVNQLLP KY WAWEKYLS CNNHWMPTEV M
Sbjct: 39  ADATGLGDIDRGAARVRVDDKRMINARADVNQLLPFKYRWAWEKYLSGCNNHWMPTEVSM 98

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
           Q D+ALWKS++GLTDDER M+KRNLGFFA+SESLVANNIVLAIYRHL+NPECRQYLLRQA
Sbjct: 99  QADIALWKSRDGLTDDERRMVKRNLGFFAASESLVANNIVLAIYRHLTNPECRQYLLRQA 158

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRR 181
           FEEAVH+HTFQYI+ SLGLDEGELFNMYREVPSIT KA WAL++T+ L  P F       
Sbjct: 159 FEEAVHTHTFQYIVESLGLDEGELFNMYREVPSITDKAAWALKHTRHLDDPGFKTGTPEA 218

Query: 182 RSRILTRSLRFL 193
               L   + F 
Sbjct: 219 DQAFLRDLVAFY 230


>gi|28868867|ref|NP_791486.1| ribonucleoside-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213969520|ref|ZP_03397656.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           syringae pv. tomato T1]
 gi|301385974|ref|ZP_07234392.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tomato Max13]
 gi|302058701|ref|ZP_07250242.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tomato K40]
 gi|302134408|ref|ZP_07260398.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|28852106|gb|AAO55181.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213925616|gb|EEB59175.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           syringae pv. tomato T1]
 gi|330960626|gb|EGH60886.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. maculicola str. ES4326]
 gi|331016758|gb|EGH96814.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 415

 Score =  262 bits (671), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 105/191 (54%), Positives = 140/191 (73%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
             GL+ ++    RV VD+K M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  
Sbjct: 67  AEGLAELEGASARVAVDEKMMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTA 126

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWK   GLTDDER ++ RNLGFF++++SLVANN+VLA+YR ++NPECRQY+LRQAFE
Sbjct: 127 DIALWKDPEGLTDDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFE 186

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QY I SL +DEGE+FNMY E+PS+  KA W L+YT+++S P F         
Sbjct: 187 EAIHTHAYQYCIESLAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTVDTDK 246

Query: 184 RILTRSLRFLC 194
            +L   + + C
Sbjct: 247 ELLRNLIAYYC 257


>gi|229590245|ref|YP_002872364.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           fluorescens SBW25]
 gi|229362111|emb|CAY49013.1| putative ribonucleoside-diphosphate reductase beta chain
           [Pseudomonas fluorescens SBW25]
          Length = 416

 Score =  262 bits (671), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 106/191 (55%), Positives = 142/191 (74%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
             GL+ ++    RV VD+KRM+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  
Sbjct: 68  AEGLAELEGSAARVAVDEKRMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTA 127

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWK+  GLTDDER ++ RNLGFF++++SLVANN+VLA+YR ++NPECRQY+LRQAFE
Sbjct: 128 DIALWKNPEGLTDDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFE 187

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QY I SL +DEGE+FNMY E+PS+  KA W L+YT+++S P F         
Sbjct: 188 EAIHTHAYQYCIESLAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTVETDK 247

Query: 184 RILTRSLRFLC 194
            +L   + + C
Sbjct: 248 ELLRNLVAYYC 258


>gi|163854887|ref|YP_001629185.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella
           petrii DSM 12804]
 gi|163258615|emb|CAP40914.1| ribonucleoside-diphosphate reductase beta chain [Bordetella petrii]
          Length = 396

 Score =  262 bits (671), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 102/184 (55%), Positives = 135/184 (73%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
            A   RV V DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALWK+
Sbjct: 55  DAAAHRVKVADKRIINGKTDVNQLVPFKYKWAWEKYLATCANHWMPQEINMSRDIALWKN 114

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H 
Sbjct: 115 PNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHA 174

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSL 190
           +QYI+ SL LDE E+FN Y EVPSI AK  + + + + ++ P+FH        ++L   +
Sbjct: 175 YQYIVESLDLDEAEIFNAYNEVPSIRAKDEFLIPFIEAIADPTFHTGTPESDQKLLKSLI 234

Query: 191 RFLC 194
            F C
Sbjct: 235 VFAC 238


>gi|170720377|ref|YP_001748065.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           putida W619]
 gi|169758380|gb|ACA71696.1| Ribonucleoside-diphosphate reductase [Pseudomonas putida W619]
          Length = 416

 Score =  262 bits (671), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 106/191 (55%), Positives = 144/191 (75%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
             GL+ ++    RV VD+KRM+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  
Sbjct: 68  AEGLAELEGSSARVAVDEKRMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTA 127

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWKS++GLT+DER ++ RNLGFF++++SLVANN+ LA+YR ++NPECRQY+LRQAFE
Sbjct: 128 DIALWKSQDGLTEDERRIVMRNLGFFSTADSLVANNLALAVYRLITNPECRQYILRQAFE 187

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QY I SLG+DEGE+FNMY E+PS+  KA W L+YT+ +S P F+        
Sbjct: 188 EAIHTHAYQYCIESLGMDEGEIFNMYHEIPSVAKKAAWGLKYTRAISDPEFNTGTVETDK 247

Query: 184 RILTRSLRFLC 194
            +L   + + C
Sbjct: 248 ELLRNLIAYYC 258


>gi|192291019|ref|YP_001991624.1| ribonucleotide-diphosphate reductase subunit beta [Rhodopseudomonas
           palustris TIE-1]
 gi|192284768|gb|ACF01149.1| Ribonucleoside-diphosphate reductase [Rhodopseudomonas palustris
           TIE-1]
          Length = 373

 Score =  262 bits (670), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 140/192 (72%), Positives = 155/192 (80%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
            + TGL  I  G  RV VDDKRM+NAR+DVNQLLPLKY WAWEKYL+ACNNHWMPTEV M
Sbjct: 23  PDTTGLGTIDRGAARVRVDDKRMINARADVNQLLPLKYHWAWEKYLAACNNHWMPTEVSM 82

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
           Q D+ALWKS++GLT+DER M+KRNLGFFA+SESLVANNIVLAIYRHL+NPECRQYLLRQA
Sbjct: 83  QADIALWKSRDGLTEDERHMVKRNLGFFAASESLVANNIVLAIYRHLTNPECRQYLLRQA 142

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRR 181
           FEEAVH+HTFQYI+ SLGLDEGELFNMYREVPSIT KA WAL YT+ L  P F       
Sbjct: 143 FEEAVHTHTFQYIVESLGLDEGELFNMYREVPSITDKAAWALDYTKHLDDPHFETGTPAT 202

Query: 182 RSRILTRSLRFL 193
               L   + F 
Sbjct: 203 DQAFLLDLIAFY 214


>gi|71737432|ref|YP_275887.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|257485935|ref|ZP_05639976.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|289628680|ref|ZP_06461634.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|289648392|ref|ZP_06479735.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. aesculi str. 2250]
 gi|298487941|ref|ZP_07005980.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|302184861|ref|ZP_07261534.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. syringae 642]
 gi|71557985|gb|AAZ37196.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|298157492|gb|EFH98573.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|330866023|gb|EGH00732.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. aesculi str. 0893_23]
 gi|330896997|gb|EGH28545.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. japonica str. M301072PT]
 gi|330986742|gb|EGH84845.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. lachrymans str. M301315]
 gi|331010341|gb|EGH90397.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 415

 Score =  262 bits (670), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 105/191 (54%), Positives = 141/191 (73%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
             GL+ ++    RV VD+K M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  
Sbjct: 67  AEGLAELEGASARVAVDEKMMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTA 126

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWK+  GLTDDER ++ RNLGFF++++SLVANN+VLA+YR ++NPECRQY+LRQAFE
Sbjct: 127 DIALWKNPEGLTDDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFE 186

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QY I SL +DEGE+FNMY E+PS+  KA W L+YT+++S P F         
Sbjct: 187 EAIHTHAYQYCIESLAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTVETDK 246

Query: 184 RILTRSLRFLC 194
            +L   + + C
Sbjct: 247 ELLRNLIAYYC 257


>gi|330880140|gb|EGH14289.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. morsprunorum str. M302280PT]
 gi|330966559|gb|EGH66819.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. actinidiae str. M302091]
          Length = 415

 Score =  262 bits (670), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 105/191 (54%), Positives = 140/191 (73%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
             GL+ ++    RV VD+K M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  
Sbjct: 67  AEGLAELEGASARVAVDEKMMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTA 126

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWK   GLTDDER ++ RNLGFF++++SLVANN+VLA+YR ++NPECRQY+LRQAFE
Sbjct: 127 DIALWKDPEGLTDDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFE 186

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QY I SL +DEGE+FNMY E+PS+  KA W L+YT+++S P F         
Sbjct: 187 EAIHTHAYQYCIESLAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTVDTDK 246

Query: 184 RILTRSLRFLC 194
            +L   + + C
Sbjct: 247 ELLRNLIAYYC 257


>gi|312960686|ref|ZP_07775192.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           fluorescens WH6]
 gi|311285212|gb|EFQ63787.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           fluorescens WH6]
          Length = 416

 Score =  262 bits (670), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 106/191 (55%), Positives = 142/191 (74%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
             GL+ ++    RV VD+KRM+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  
Sbjct: 68  AEGLAELEGASARVAVDEKRMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTA 127

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWK+  GLTDDER ++ RNLGFF++++SLVANN+VLA+YR ++NPECRQY+LRQAFE
Sbjct: 128 DIALWKNPEGLTDDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFE 187

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QY I SL +DEGE+FNMY E+PS+  KA W L+YT+++S P F         
Sbjct: 188 EAIHTHAYQYCIESLAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTVDTDK 247

Query: 184 RILTRSLRFLC 194
            +L   + + C
Sbjct: 248 ELLRNLVAYYC 258


>gi|148359319|ref|YP_001250526.1| ribonucleoside-diphosphate reductase subunit beta [Legionella
           pneumophila str. Corby]
 gi|296107366|ref|YP_003619066.1| ribonucleoside-diphosphate reductase beta chain [Legionella
           pneumophila 2300/99 Alcoy]
 gi|148281092|gb|ABQ55180.1| ribonucleoside-diphosphate reductase, beta subunit [Legionella
           pneumophila str. Corby]
 gi|295649267|gb|ADG25114.1| ribonucleoside-diphosphate reductase beta chain [Legionella
           pneumophila 2300/99 Alcoy]
 gi|307610475|emb|CBX00047.1| hypothetical protein LPW_18021 [Legionella pneumophila 130b]
          Length = 367

 Score =  262 bits (670), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 115/193 (59%), Positives = 152/193 (78%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +   TGL  ++ G  R++VDDK+++N R+D+NQL+P KY WAW+KYL+AC NHWMP E+ 
Sbjct: 14  LMGATGLETLEMGAARIHVDDKQIINCRADLNQLVPFKYKWAWDKYLTACANHWMPNEIS 73

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK   GLT+DERL+IKRNLGFF++++SLVANN+VLA+YRH++NPECRQYLLRQ
Sbjct: 74  MSADVALWKDPYGLTEDERLIIKRNLGFFSTADSLVANNLVLAVYRHITNPECRQYLLRQ 133

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYII SLGLDE E+FNMYRE+PS++ KA WAL +TQ+L   +FH     
Sbjct: 134 AFEEALHTHAYQYIIESLGLDEAEVFNMYREIPSVSRKAVWALPFTQSLGDETFHTGTPE 193

Query: 181 RRSRILTRSLRFL 193
              R+L   + F 
Sbjct: 194 NDQRLLRDLIAFY 206


>gi|66046950|ref|YP_236791.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. syringae B728a]
 gi|237798938|ref|ZP_04587399.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|237806191|ref|ZP_04592895.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|63257657|gb|AAY38753.1| Ribonucleoside-diphosphate reductase [Pseudomonas syringae pv.
           syringae B728a]
 gi|330980156|gb|EGH78342.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. aptata str. DSM 50252]
 gi|331021792|gb|EGI01849.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|331027304|gb|EGI07359.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. oryzae str. 1_6]
          Length = 415

 Score =  262 bits (670), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 105/191 (54%), Positives = 141/191 (73%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
             GL+ ++    RV VD+K M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  
Sbjct: 67  AEGLAELEGASARVAVDEKMMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTA 126

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWK+  GLTDDER ++ RNLGFF++++SLVANN+VLA+YR ++NPECRQY+LRQAFE
Sbjct: 127 DIALWKNPEGLTDDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFE 186

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QY I SL +DEGE+FNMY E+PS+  KA W L+YT+++S P F         
Sbjct: 187 EAIHTHAYQYCIESLAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTVDTDK 246

Query: 184 RILTRSLRFLC 194
            +L   + + C
Sbjct: 247 ELLRNLIAYYC 257


>gi|212212091|ref|YP_002303027.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
           burnetii CbuG_Q212]
 gi|212010501|gb|ACJ17882.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii
           CbuG_Q212]
          Length = 401

 Score =  262 bits (670), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 113/192 (58%), Positives = 149/192 (77%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           +  TGL  ++ G  R+ VDDK+++N  +D+NQL+P KY WAW+KYLS C NHWMP E+ M
Sbjct: 50  SGATGLEQLEMGAARIRVDDKKIINCHADLNQLVPFKYTWAWQKYLSGCANHWMPNEINM 109

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D+ALWK  NGLT DER ++KR+LGFF++++SLVANN+VLAIYRH++NPECRQYLLRQA
Sbjct: 110 TADIALWKDPNGLTADERTIVKRSLGFFSTADSLVANNLVLAIYRHITNPECRQYLLRQA 169

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRR 181
           FEEA+H+H +QYII SLGLDE E+FNMYRE+P+++ KA WAL YTQ+L+ P+F       
Sbjct: 170 FEEALHTHAYQYIIESLGLDEAEVFNMYRELPAVSKKAVWALPYTQSLADPNFKTGTPED 229

Query: 182 RSRILTRSLRFL 193
             R+L   + F 
Sbjct: 230 DRRLLRDLIAFY 241


>gi|254429337|ref|ZP_05043044.1| ribonucleoside-diphosphate reductase, beta subunit [Alcanivorax sp.
           DG881]
 gi|196195506|gb|EDX90465.1| ribonucleoside-diphosphate reductase, beta subunit [Alcanivorax sp.
           DG881]
          Length = 355

 Score =  262 bits (670), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 111/190 (58%), Positives = 144/190 (75%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
            G++ ++    RV VDDKRM+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D
Sbjct: 8   EGVAELEGASGRVEVDDKRMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMNAD 67

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           LALWK  +GLTDDER ++KRNLGFF++++SLVANN+VLAIYR ++NPECRQY+LRQ+FEE
Sbjct: 68  LALWKKADGLTDDERRIVKRNLGFFSTADSLVANNLVLAIYRLITNPECRQYILRQSFEE 127

Query: 125 AVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           A+H+H +QY I SLG+DEGE+FNMY+E+PS+  KA W +QYT+ LS P F          
Sbjct: 128 AIHTHAYQYCIESLGMDEGEIFNMYQEIPSVAKKAQWGIQYTRDLSDPEFTTGTVETDKA 187

Query: 185 ILTRSLRFLC 194
           +L   + F C
Sbjct: 188 LLENLIAFYC 197


>gi|297538242|ref|YP_003674011.1| Ribonucleoside-diphosphate reductase [Methylotenera sp. 301]
 gi|297257589|gb|ADI29434.1| Ribonucleoside-diphosphate reductase [Methylotenera sp. 301]
          Length = 376

 Score =  262 bits (670), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 102/194 (52%), Positives = 136/194 (70%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           + + T  +   +   RVN  DKRM+N ++DVNQL+P KY WAW+KYL+ C NHWMP EV 
Sbjct: 25  IKSATAAANQPSHSGRVNASDKRMINGQTDVNQLVPFKYHWAWDKYLAGCANHWMPQEVS 84

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+A WK    L+DDERL++KRNLGFF +++SL ANNIVL  YRH++ PECRQYLLRQ
Sbjct: 85  MSRDIAQWKDSTALSDDERLIVKRNLGFFTTADSLAANNIVLGTYRHITAPECRQYLLRQ 144

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
            FEEA+H+H +QYI+ SLGLDE E+FN Y+E+PSI AK ++ + +  TL+ P+F      
Sbjct: 145 GFEEAIHTHAYQYIVESLGLDESEVFNAYQEIPSIKAKDDFLIPFINTLTDPAFKTGTAE 204

Query: 181 RRSRILTRSLRFLC 194
               +L   + F C
Sbjct: 205 ADQELLRSLIVFAC 218


>gi|29654845|ref|NP_820537.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
           burnetii RSA 493]
 gi|154705923|ref|YP_001423853.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
           burnetii Dugway 5J108-111]
 gi|161831080|ref|YP_001597389.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
           burnetii RSA 331]
 gi|29542113|gb|AAO91051.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii
           RSA 493]
 gi|154355209|gb|ABS76671.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii
           Dugway 5J108-111]
 gi|161762947|gb|ABX78589.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
           burnetii RSA 331]
          Length = 401

 Score =  262 bits (669), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 113/192 (58%), Positives = 149/192 (77%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           +  TGL  ++ G  R+ VDDK+++N  +D+NQL+P KY WAW+KYLS C NHWMP E+ M
Sbjct: 50  SGATGLEQLEMGAARIRVDDKKIINCHADLNQLVPFKYTWAWQKYLSGCANHWMPNEINM 109

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D+ALWK  NGLT DER ++KR+LGFF++++SLVANN+VLAIYRH++NPECRQYLLRQA
Sbjct: 110 TADIALWKDPNGLTADERTIVKRSLGFFSTADSLVANNLVLAIYRHITNPECRQYLLRQA 169

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRR 181
           FEEA+H+H +QYII SLGLDE E+FNMYRE+P+++ KA WAL YTQ+L+ P+F       
Sbjct: 170 FEEALHTHAYQYIIESLGLDEAEVFNMYRELPAVSKKAVWALPYTQSLADPNFKTGTPED 229

Query: 182 RSRILTRSLRFL 193
             R+L   + F 
Sbjct: 230 DRRLLRDLIAFY 241


>gi|330941351|gb|EGH44203.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 317

 Score =  262 bits (669), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 105/191 (54%), Positives = 140/191 (73%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
             GL+ ++    RV VD+K M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  
Sbjct: 67  AEGLAELEGASARVAVDEKMMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTA 126

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D ALWK+  GLTDDER ++ RNLGFF++++SLVANN+VLA+YR ++NPECRQY+LRQAFE
Sbjct: 127 DTALWKNPEGLTDDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFE 186

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QY I SL +DEGE+FNMY E+PS+  KA W L+YT+++S P F         
Sbjct: 187 EAIHTHAYQYCIESLAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTVETDK 246

Query: 184 RILTRSLRFLC 194
            +L   + + C
Sbjct: 247 ELLRNLIAYYC 257


>gi|104780527|ref|YP_607025.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           entomophila L48]
 gi|95109514|emb|CAK14215.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudomonas
           entomophila L48]
          Length = 415

 Score =  262 bits (669), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 106/191 (55%), Positives = 143/191 (74%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
             GL+ ++    RV VD+KRM+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  
Sbjct: 67  AEGLAELEGSSARVAVDEKRMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTA 126

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWKS +GLT+DER ++ RNLGFF++++SLVANN+ LA+YR ++NPECRQY+LRQAFE
Sbjct: 127 DIALWKSMDGLTEDERRIVMRNLGFFSTADSLVANNLALAVYRLITNPECRQYILRQAFE 186

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QY I SLG+DEGE+FNMY E+PS+  KA W L+YT+ +S P F+        
Sbjct: 187 EAIHTHAYQYCIESLGMDEGEIFNMYHEIPSVAKKAAWGLKYTRAISDPEFNTGTVETDK 246

Query: 184 RILTRSLRFLC 194
            +L   + + C
Sbjct: 247 ELLRNLIAYYC 257


>gi|52842002|ref|YP_095801.1| ribonucleotide-diphosphate reductase subunit beta [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
 gi|52629113|gb|AAU27854.1| ribonucleoside-diphosphate reductase, beta subunit [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
          Length = 381

 Score =  262 bits (669), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 115/193 (59%), Positives = 152/193 (78%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +   TGL  ++ G  R++VDDK+++N R+D+NQL+P KY WAW+KYL+AC NHWMP E+ 
Sbjct: 28  LMGATGLETLEMGAARIHVDDKQIINCRADLNQLVPFKYKWAWDKYLTACANHWMPNEIS 87

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK   GLT+DERL+IKRNLGFF++++SLVANN+VLA+YRH++NPECRQYLLRQ
Sbjct: 88  MSADVALWKDPYGLTEDERLIIKRNLGFFSTADSLVANNLVLAVYRHITNPECRQYLLRQ 147

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYII SLGLDE E+FNMYRE+PS++ KA WAL +TQ+L   +FH     
Sbjct: 148 AFEEALHTHAYQYIIESLGLDEAEVFNMYREIPSVSRKAVWALPFTQSLGDETFHTGTPE 207

Query: 181 RRSRILTRSLRFL 193
              R+L   + F 
Sbjct: 208 NDQRLLRDLIAFY 220


>gi|187925407|ref|YP_001897049.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           phytofirmans PsJN]
 gi|187716601|gb|ACD17825.1| Ribonucleoside-diphosphate reductase [Burkholderia phytofirmans
           PsJN]
          Length = 415

 Score =  262 bits (669), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 106/190 (55%), Positives = 133/190 (70%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
                    E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP EV M  D
Sbjct: 68  AAAETAAVSEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEVNMSRD 127

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           +ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEE
Sbjct: 128 IALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEE 187

Query: 125 AVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           A+H+H +QYI+ SLGLDEGE+FN Y EV SI AK  + + Y   L+ P+F          
Sbjct: 188 AIHTHAYQYIVESLGLDEGEIFNAYHEVSSIRAKDEFLIPYIHVLTDPAFKTGTLEADQT 247

Query: 185 ILTRSLRFLC 194
           +L   + F C
Sbjct: 248 LLRSLIVFAC 257


>gi|153208286|ref|ZP_01946665.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
           burnetii 'MSU Goat Q177']
 gi|165919229|ref|ZP_02219315.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
           burnetii RSA 334]
 gi|212219268|ref|YP_002306055.1| ribonucleotide-diphosphate reductase subunit beta [Coxiella
           burnetii CbuK_Q154]
 gi|120576070|gb|EAX32694.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
           burnetii 'MSU Goat Q177']
 gi|165917090|gb|EDR35694.1| ribonucleoside-diphosphate reductase, beta subunit [Coxiella
           burnetii RSA 334]
 gi|212013530|gb|ACJ20910.1| ribonucleoside-diphosphate reductase beta chain [Coxiella burnetii
           CbuK_Q154]
          Length = 401

 Score =  262 bits (669), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 113/192 (58%), Positives = 149/192 (77%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           +  TGL  ++ G  R+ VDDK+++N  +D+NQL+P KY WAW+KYLS C NHWMP E+ M
Sbjct: 50  SGATGLEQLEMGAARIRVDDKKIINCHADLNQLVPFKYTWAWQKYLSGCANHWMPNEINM 109

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D+ALWK  NGLT DER ++KR+LGFF++++SLVANN+VLAIYRH++NPECRQYLLRQA
Sbjct: 110 TADIALWKDPNGLTADERTIVKRSLGFFSTADSLVANNLVLAIYRHITNPECRQYLLRQA 169

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRR 181
           FEEA+H+H +QYII SLGLDE E+FNMYRE+P+++ KA WAL YTQ+L+ P+F       
Sbjct: 170 FEEALHTHAYQYIIESLGLDEAEVFNMYRELPAVSKKAVWALPYTQSLADPNFKTGTPED 229

Query: 182 RSRILTRSLRFL 193
             R+L   + F 
Sbjct: 230 DRRLLRDLIAFY 241


>gi|209885874|ref|YP_002289731.1| ribonucleoside-diphosphate reductase, beta subunit [Oligotropha
           carboxidovorans OM5]
 gi|209874070|gb|ACI93866.1| ribonucleoside-diphosphate reductase, beta subunit [Oligotropha
           carboxidovorans OM5]
          Length = 377

 Score =  262 bits (669), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 138/192 (71%), Positives = 153/192 (79%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           A  TGL  I     RV+VD+KRM+N R+DVNQLLPLKY WAWEKYLS CNNHWMPTEV M
Sbjct: 27  AEQTGLGEIDRTGGRVSVDEKRMINCRADVNQLLPLKYKWAWEKYLSGCNNHWMPTEVSM 86

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
           Q D+ALWKS++GLTDDER  IKRNLGFFA+SESLVANNIVLAIYRHL+NPECRQYLLRQA
Sbjct: 87  QADIALWKSRDGLTDDERRAIKRNLGFFAASESLVANNIVLAIYRHLTNPECRQYLLRQA 146

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRR 181
           FEEAVH+HTFQYI+ SLGLDEGELFNMYREVPSIT KA WAL++T+ L  P F       
Sbjct: 147 FEEAVHTHTFQYIVESLGLDEGELFNMYREVPSITDKAAWALKHTKNLDDPDFKTGTLEA 206

Query: 182 RSRILTRSLRFL 193
               L   + F 
Sbjct: 207 DQAFLRDLVAFY 218


>gi|256822964|ref|YP_003146927.1| Ribonucleoside-diphosphate reductase [Kangiella koreensis DSM
           16069]
 gi|256796503|gb|ACV27159.1| Ribonucleoside-diphosphate reductase [Kangiella koreensis DSM
           16069]
          Length = 421

 Score =  261 bits (668), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 106/189 (56%), Positives = 145/189 (76%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G  R+ VDDK+M+N R+D+NQL+P KY WAW+KYL  C+NHWMP E+ M  D+
Sbjct: 75  GLEELEMGAARIEVDDKKMINCRADLNQLVPFKYDWAWQKYLDGCSNHWMPQEINMTKDV 134

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           A WK  NGLTDDER ++ R+LG+F++++SLVANN+VLAIYR ++NPECRQY+LRQAFEEA
Sbjct: 135 ATWKDPNGLTDDERKIVMRSLGYFSTADSLVANNLVLAIYRLITNPECRQYILRQAFEEA 194

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY + SLG+DE E+FNMYREVPSI  KA W++++TQ +S+P+F          +
Sbjct: 195 IHTHAYQYCVESLGMDEAEVFNMYREVPSIAKKAAWSIKHTQGISNPTFKTGTDEADQEL 254

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 255 LRNLIGFYC 263


>gi|291615085|ref|YP_003525242.1| ribonucleoside-diphosphate reductase [Sideroxydans lithotrophicus
           ES-1]
 gi|291585197|gb|ADE12855.1| Ribonucleoside-diphosphate reductase [Sideroxydans lithotrophicus
           ES-1]
          Length = 382

 Score =  261 bits (668), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 104/185 (56%), Positives = 134/185 (72%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
                 R+ V+DKR++N+ +DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+ALWK
Sbjct: 40  ASTSTGRIRVEDKRIINSSADVNQLVPFKYKWAWEKYLAGCANHWMPQEVNMSADIALWK 99

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
           + NGLTDDER ++KRNLGFF +++SL ANNI L  YRH++NPECRQ+LLRQAFEEA+H+H
Sbjct: 100 NPNGLTDDERRLVKRNLGFFTTADSLAANNIALGTYRHITNPECRQFLLRQAFEEAIHTH 159

Query: 130 TFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRS 189
            +QYI+ SLGLDEGE+FNMY EV SI  K  + L +   L++P F         ++L   
Sbjct: 160 AYQYIVESLGLDEGEVFNMYHEVQSIRDKDEFLLPFIDVLTNPDFKTGTPENDQKLLRSL 219

Query: 190 LRFLC 194
           + F C
Sbjct: 220 IVFAC 224


>gi|255019898|ref|ZP_05291973.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Acidithiobacillus caldus ATCC 51756]
 gi|254970678|gb|EET28165.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Acidithiobacillus caldus ATCC 51756]
          Length = 374

 Score =  261 bits (667), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 106/180 (58%), Positives = 136/180 (75%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           +RV  +DKR++N  +DVNQL+P KY WAW+KYL+AC NHWMP EV M  D+ALWK   GL
Sbjct: 37  ERVRAEDKRIINGSADVNQLVPFKYHWAWDKYLAACANHWMPQEVQMARDIALWKDPKGL 96

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           T+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQYLLRQAFEEA+H+H +QYI
Sbjct: 97  TEDERRIVKRNLGFFTTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYI 156

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + S+GLDEGE+FNMY EVPSI AK  + L + +TL+ PSFH        ++L   + F  
Sbjct: 157 VESIGLDEGEIFNMYHEVPSIRAKDEFLLPFIRTLTDPSFHTGTPENDQKLLRSLIVFAA 216


>gi|167564160|ref|ZP_02357076.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           oklahomensis EO147]
          Length = 369

 Score =  261 bits (667), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 107/187 (57%), Positives = 137/187 (73%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           S   A E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+AL
Sbjct: 25  SAAVASEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIAL 84

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           WK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H
Sbjct: 85  WKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIH 144

Query: 128 SHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILT 187
           +H +QYI+ SLGLDEGE+FN Y EV SI AK  + + +  TL+ P+F         ++L 
Sbjct: 145 THAYQYIVESLGLDEGEIFNAYHEVSSIRAKDEFLIPFIHTLTDPAFKTGTLEADQKLLK 204

Query: 188 RSLRFLC 194
             + F C
Sbjct: 205 SLIVFAC 211


>gi|186477386|ref|YP_001858856.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           phymatum STM815]
 gi|184193845|gb|ACC71810.1| Ribonucleoside-diphosphate reductase [Burkholderia phymatum STM815]
          Length = 407

 Score =  261 bits (667), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 106/181 (58%), Positives = 134/181 (74%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           E RVNV DKR++N ++DVNQL+P KY WAWEKYLS C NHWMP E+ M  D+ALWK  NG
Sbjct: 69  EARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLSGCANHWMPQEINMSRDIALWKDPNG 128

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           LT+DER +IKRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +QY
Sbjct: 129 LTEDERRIIKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQY 188

Query: 134 IITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           I+ SLGLDEGE+FN Y EV SI  K  + + +  TL+ P+F         ++L   + F 
Sbjct: 189 IVESLGLDEGEIFNAYHEVQSIRDKDEFLIPFIHTLTDPAFKTGTLEADQKLLKSLIVFA 248

Query: 194 C 194
           C
Sbjct: 249 C 249


>gi|300703002|ref|YP_003744604.1| ribonucleoside diphosphate reductase 1 subunit beta, ferritin-like
           [Ralstonia solanacearum CFBP2957]
 gi|299070665|emb|CBJ41960.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Ralstonia solanacearum CFBP2957]
          Length = 402

 Score =  261 bits (667), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 104/191 (54%), Positives = 132/191 (69%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
           N   +      +RVN  DKR++N  +DVNQL+P KY WAWEKYL+ C NHWMP E+ M  
Sbjct: 54  NNPNAAAAQSNRRVNAADKRVINGATDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSR 113

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWK  NGLT+DER +IKRNLGFF +++SL ANNIVL  YR ++ PECRQYLLRQAFE
Sbjct: 114 DIALWKDPNGLTEDERRIIKRNLGFFVTADSLAANNIVLGTYRQITAPECRQYLLRQAFE 173

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QYI+ SLGLDE E+FN Y EV SI  K  + + +  TL+ PSF         
Sbjct: 174 EAIHTHAYQYIVESLGLDEAEIFNAYHEVQSIRDKDEFLIPFIDTLTDPSFKTGTPENDQ 233

Query: 184 RILTRSLRFLC 194
           ++L   + F C
Sbjct: 234 KLLKSLIVFAC 244


>gi|160871658|ref|ZP_02061790.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsiella
           grylli]
 gi|159120457|gb|EDP45795.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsiella
           grylli]
          Length = 362

 Score =  261 bits (667), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 107/189 (56%), Positives = 148/189 (78%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
           TGL  ++ G  RV+VDDK+++N R+D+NQL+P KY WAWEKYL+AC NHWMP E+ M  D
Sbjct: 14  TGLETLEVGAARVHVDDKKIINCRADLNQLVPFKYKWAWEKYLAACANHWMPQEINMSAD 73

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           +ALW+   GL +DERL+++R+LGFF++++SLVANN+VLA+YRH++NPECRQYLLRQAFEE
Sbjct: 74  IALWRDAKGLREDERLIVERSLGFFSTADSLVANNLVLAVYRHITNPECRQYLLRQAFEE 133

Query: 125 AVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           A+H+H +QY+I SLG+DE  +FNMYRE+P++  K  WAL +TQ+L+ P+F         R
Sbjct: 134 ALHTHAYQYVIESLGMDEARIFNMYRELPTVAKKTEWALPFTQSLADPNFRTGTPETDQR 193

Query: 185 ILTRSLRFL 193
           +L   + F 
Sbjct: 194 LLRDLIAFY 202


>gi|320323423|gb|EFW79511.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. glycinea str. B076]
 gi|320327620|gb|EFW83632.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330876273|gb|EGH10422.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 415

 Score =  260 bits (666), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 105/191 (54%), Positives = 142/191 (74%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
             GL+ ++    RV VD+K M+N R+D+NQL+P KY WAW+KYL  C+NHWMP EV M  
Sbjct: 67  AEGLAELEGASARVAVDEKMMINCRADLNQLVPFKYDWAWQKYLDGCSNHWMPQEVNMTA 126

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWK+  GLTDDER ++ RNLGFF++++SLVANN+VLA+YR ++NPECRQY+LRQAFE
Sbjct: 127 DIALWKNPEGLTDDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFE 186

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QY I SL +DEGE+FNMY E+PS+  KA W L+YT+++S P F         
Sbjct: 187 EAIHTHAYQYCIESLAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTVETDK 246

Query: 184 RILTRSLRFLC 194
            +L   + + C
Sbjct: 247 ELLRNLIAYYC 257


>gi|187479453|ref|YP_787478.1| ribonucleotide-diphosphate reductase subunit beta [Bordetella avium
           197N]
 gi|115424040|emb|CAJ50593.1| ribonucleoside-diphosphate reductase beta chain [Bordetella avium
           197N]
          Length = 394

 Score =  260 bits (666), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 101/193 (52%), Positives = 135/193 (69%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           A     + +    +RV V DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M
Sbjct: 44  AAPQSAADLGNTAQRVKVADKRIINGQTDVNQLVPFKYKWAWEKYLATCANHWMPQEINM 103

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D+ALWK+ NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQA
Sbjct: 104 SRDIALWKNPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQA 163

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRR 181
           FEEA+H+H +QYI+ SL LDE E+FN Y EVPSI AK  + + +   ++ P+F       
Sbjct: 164 FEEAIHTHAYQYIVESLDLDESEIFNAYNEVPSIRAKDEFLIPFIDAIADPNFKTGTPEA 223

Query: 182 RSRILTRSLRFLC 194
              +L   + F C
Sbjct: 224 DQTLLKSLIVFAC 236


>gi|75677068|ref|YP_319489.1| ribonucleotide-diphosphate reductase subunit beta [Nitrobacter
           winogradskyi Nb-255]
 gi|74421938|gb|ABA06137.1| ribonucleotide reductase [Nitrobacter winogradskyi Nb-255]
          Length = 391

 Score =  260 bits (665), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 140/192 (72%), Positives = 154/192 (80%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
            +  GL  I  G  RV VDDKRM+NAR+DVNQLLPLKY WAWEKYLS CNNHWMPTEV M
Sbjct: 41  TDAAGLGDIDRGGARVRVDDKRMINARADVNQLLPLKYRWAWEKYLSGCNNHWMPTEVSM 100

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
           Q D+ALWKSK+GLTDDER M+KRNLGFFA+SESLVANNIVLAIYRHL+NPECRQYLLRQA
Sbjct: 101 QADIALWKSKDGLTDDERRMVKRNLGFFAASESLVANNIVLAIYRHLTNPECRQYLLRQA 160

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRR 181
           FEEAVH+HTFQYI+ SLGLDEGELFNMYREVPSIT KA WAL++T+ L  P F       
Sbjct: 161 FEEAVHTHTFQYIVESLGLDEGELFNMYREVPSITDKAAWALKHTRHLDDPGFKTGTPEA 220

Query: 182 RSRILTRSLRFL 193
               L   + F 
Sbjct: 221 DQAFLRDLVAFY 232


>gi|110635036|ref|YP_675244.1| ribonucleotide-diphosphate reductase subunit beta [Mesorhizobium
           sp. BNC1]
 gi|110286020|gb|ABG64079.1| ribonucleotide reductase [Chelativorans sp. BNC1]
          Length = 369

 Score =  260 bits (665), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 140/192 (72%), Positives = 158/192 (82%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
            + TGL  I+ G  RV+VDDKRM+NAR+DVNQLLPLKY WAWEKYLS CNNHWMPTEV M
Sbjct: 19  TDATGLGTIERGAGRVSVDDKRMINARADVNQLLPLKYRWAWEKYLSGCNNHWMPTEVSM 78

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
           Q D+ALWKS++GLT+DER M+KRNLGFFA+SESLVANNIVLAIYRHL+NPECRQYLLRQA
Sbjct: 79  QADIALWKSRDGLTEDERRMVKRNLGFFAASESLVANNIVLAIYRHLTNPECRQYLLRQA 138

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRR 181
           FEEAVH+HTFQYI+ SLGLDEGELFNMYREVPSIT KA WAL+YT+ L  P+F       
Sbjct: 139 FEEAVHTHTFQYIVESLGLDEGELFNMYREVPSITDKAAWALEYTRHLDDPNFRTGTPEA 198

Query: 182 RSRILTRSLRFL 193
               L   + F 
Sbjct: 199 DQAFLRDLVAFY 210


>gi|94312018|ref|YP_585228.1| ribonucleotide-diphosphate reductase subunit beta [Cupriavidus
           metallidurans CH34]
 gi|93355870|gb|ABF09959.1| Ribonucleoside-diphosphate reductase beta subunit [Cupriavidus
           metallidurans CH34]
          Length = 395

 Score =  260 bits (665), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 103/191 (53%), Positives = 132/191 (69%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
           N   +      +RVN  DKR++N  +DVNQL+P KY WAWEKYL+ C NHWMP E+ M  
Sbjct: 47  NNPNAAAAQSTRRVNAADKRVINGATDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSR 106

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWK  NGLT+DER +IKRNLGFF +++SL ANNIVL  YR ++ PECRQYLLRQAFE
Sbjct: 107 DIALWKDPNGLTEDERRIIKRNLGFFVTADSLAANNIVLGTYRQITAPECRQYLLRQAFE 166

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QYI+ SLGL+E E+FN Y EV SI  K  + + +  TL+ PSF         
Sbjct: 167 EAIHTHAYQYIVESLGLNEAEIFNAYHEVQSIRDKDEFLIPFIDTLTDPSFKTGTPENDQ 226

Query: 184 RILTRSLRFLC 194
           ++L   + F C
Sbjct: 227 KLLKSLIVFAC 237


>gi|167574685|ref|ZP_02367559.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           oklahomensis C6786]
          Length = 369

 Score =  260 bits (665), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 107/187 (57%), Positives = 137/187 (73%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           S   A E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+AL
Sbjct: 25  SAAVASEARVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIAL 84

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           WK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H
Sbjct: 85  WKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIH 144

Query: 128 SHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILT 187
           +H +QYI+ SLGLDEGE+FN Y EV SI AK  + + +  TL+ P+F         ++L 
Sbjct: 145 THAYQYIVESLGLDEGEIFNAYHEVSSIRAKDEFLIPFIHTLTDPAFKTGTLVADQKLLK 204

Query: 188 RSLRFLC 194
             + F C
Sbjct: 205 SLIVFAC 211


>gi|332110818|gb|EGJ10995.1| ribonucleotide-diphosphate reductase subunit beta [Rubrivivax
           benzoatilyticus JA2]
          Length = 385

 Score =  260 bits (664), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 103/193 (53%), Positives = 134/193 (69%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           A+        A  +RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP EV M
Sbjct: 35  ASPVSRPAATAHTRRVNVADKRIINGQTDVNQLVPFKYKWAWEKYLATCANHWMPQEVNM 94

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQA
Sbjct: 95  SRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQA 154

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRR 181
           FEEA+H+H +QYI+ SLGLDEGE+FN Y EV +I  K  + + +   +  P+F       
Sbjct: 155 FEEAIHTHAYQYIVESLGLDEGEIFNAYHEVAAIRDKDEFLIPFIDAIMDPAFSTGTPEA 214

Query: 182 RSRILTRSLRFLC 194
              +L   + F C
Sbjct: 215 DQTLLKSLIVFAC 227


>gi|254282900|ref|ZP_04957868.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium NOR51-B]
 gi|219679103|gb|EED35452.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium NOR51-B]
          Length = 421

 Score =  260 bits (664), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 106/189 (56%), Positives = 144/189 (76%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G +RV+VD+K M+N R+D+NQL+P KY WAW+KY+  C NHWMP EV M  D+
Sbjct: 75  GLEELEMGAQRVSVDEKAMINCRADLNQLVPFKYDWAWQKYIDGCANHWMPQEVNMTADV 134

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           A WKS +GLT+DER ++ R+LG+F++++SLVANN+VL IYR ++NPECRQYLLRQAFEEA
Sbjct: 135 ATWKSSDGLTEDERRIVLRSLGYFSTADSLVANNLVLGIYRLITNPECRQYLLRQAFEEA 194

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEG +FNMYREVPS+  KA W+L +T +LS P+F         ++
Sbjct: 195 IHTHAYQYCIESLGMDEGAVFNMYREVPSVARKATWSLSHTHSLSDPNFKTGTVETDQQL 254

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 255 LRNLVGFYC 263


>gi|207744360|ref|YP_002260752.1| transmembrane ribonucleoside reductase (small chain) protein
           [Ralstonia solanacearum IPO1609]
 gi|206595765|emb|CAQ62692.1| transmembrane ribonucleoside reductase (small chain) protein
           [Ralstonia solanacearum IPO1609]
          Length = 410

 Score =  260 bits (664), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 103/191 (53%), Positives = 132/191 (69%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
           N   +      +RVN  DKR++N  +DVNQL+P KY WAWEKYL+ C NHWMP E+ M  
Sbjct: 62  NNPNAAAAQSNRRVNAADKRVINGATDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSR 121

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWK  NGLT+DER +IKRNLGFF +++SL ANNIVL  YR ++ PECRQYLLRQAFE
Sbjct: 122 DIALWKDPNGLTEDERRIIKRNLGFFVTADSLAANNIVLGTYRQITAPECRQYLLRQAFE 181

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QYI+ SLGL+E E+FN Y EV SI  K  + + +  TL+ PSF         
Sbjct: 182 EAIHTHAYQYIVESLGLNEAEIFNAYHEVQSIRDKDEFLIPFIDTLTDPSFKTGTPENDQ 241

Query: 184 RILTRSLRFLC 194
           ++L   + F C
Sbjct: 242 KLLKSLIVFAC 252


>gi|241589542|ref|YP_002979567.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12D]
 gi|240868254|gb|ACS65913.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12D]
          Length = 328

 Score =  260 bits (664), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 106/185 (57%), Positives = 133/185 (71%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
             A  KRVNV +KR++N  +DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+ALWK
Sbjct: 15  ASATAKRVNVAEKRIINGATDVNQLVPFKYKWAWEKYLAGCANHWMPQEVNMARDIALWK 74

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
             NGLT+DER +IKRNLGFF +++SL ANNIVL  YRH++ PECRQYLLRQAFEEA+H+H
Sbjct: 75  DPNGLTEDERRIIKRNLGFFVTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTH 134

Query: 130 TFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRS 189
            +QYI+ SLGL+E E+FN Y EV SI  K  + + +  TL+ PSF         ++L   
Sbjct: 135 AYQYIVESLGLNEAEIFNAYHEVQSIRDKDEFLIPFIDTLTDPSFKTGTPENDRKLLKSL 194

Query: 190 LRFLC 194
           + F C
Sbjct: 195 IVFAC 199


>gi|92112799|ref|YP_572727.1| ribonucleotide-diphosphate reductase subunit beta [Chromohalobacter
           salexigens DSM 3043]
 gi|91795889|gb|ABE58028.1| Ribonucleoside-diphosphate reductase [Chromohalobacter salexigens
           DSM 3043]
          Length = 420

 Score =  260 bits (664), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 109/191 (57%), Positives = 149/191 (78%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
             GL  ++ G  R+ VDDK+M+NAR+D+NQL+P KY WAW+KYL    NHWMP EV M  
Sbjct: 72  AAGLEELEMGAARIEVDDKQMINARADLNQLVPFKYEWAWQKYLDGSANHWMPQEVNMNA 131

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWKS +GLT+DER +++R+LG+F++++SLVANN+VLA+YR ++NPECRQYLLRQAFE
Sbjct: 132 DIALWKSNDGLTEDERRIVERSLGYFSTADSLVANNLVLALYRLITNPECRQYLLRQAFE 191

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QY + SLG+DEGE+FNMYREVPS+ AK+ W+L++TQ+L+ P FH        
Sbjct: 192 EAIHTHAYQYCVESLGMDEGEVFNMYREVPSVAAKSAWSLKHTQSLARPDFHTGTPETDQ 251

Query: 184 RILTRSLRFLC 194
            +L   + F C
Sbjct: 252 ELLRNLIAFYC 262


>gi|119478322|ref|ZP_01618353.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma
           proteobacterium HTCC2143]
 gi|119448662|gb|EAW29907.1| ribonucleotide-diphosphate reductase beta subunit [marine gamma
           proteobacterium HTCC2143]
          Length = 422

 Score =  259 bits (663), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 106/191 (55%), Positives = 143/191 (74%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
             GL  ++ G  R+ V+DK M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  
Sbjct: 74  TAGLEELELGAARLTVEDKAMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTA 133

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWK  NGL+DDER ++ R+LG+F++++SLVANN++LAIYRH++NPECRQYLLRQAFE
Sbjct: 134 DVALWKDPNGLSDDERRIVMRSLGYFSTADSLVANNLILAIYRHITNPECRQYLLRQAFE 193

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QY + SL +DEGE+FNMYRE+PSI  KA W+L++T +LS P+F         
Sbjct: 194 EAIHTHAYQYCVESLAMDEGEVFNMYRELPSIAKKAAWSLRHTHSLSDPNFKTGTPETDQ 253

Query: 184 RILTRSLRFLC 194
            +L   + F  
Sbjct: 254 ELLRNLIGFYA 264


>gi|192360823|ref|YP_001982048.1| ribonucleotide-diphosphate reductase subunit beta [Cellvibrio
           japonicus Ueda107]
 gi|190686988|gb|ACE84666.1| ribonucleoside reductase, beta subunit [Cellvibrio japonicus
           Ueda107]
          Length = 429

 Score =  259 bits (663), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 107/193 (55%), Positives = 146/193 (75%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +    GL  ++ G  R+ VDDKRM+N R+D+NQL+P KY WAW+KYL  C NHWMP EV 
Sbjct: 78  LDPAPGLEELEMGAARIQVDDKRMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVN 137

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWKSK+GLT+DER ++ R+LG+F++++SLVANN+VLAIYR ++NPECRQY+LRQ
Sbjct: 138 MTADIALWKSKDGLTEDERRIVMRSLGYFSTADSLVANNLVLAIYRLITNPECRQYILRQ 197

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           +FEEA+H+H +QY I SLG+DEGE+FNMYRE+PS+  KA W+L +T +L +P+F      
Sbjct: 198 SFEEAIHTHAYQYCIESLGMDEGEVFNMYRELPSVANKAAWSLHHTHSLGNPTFTTGTPE 257

Query: 181 RRSRILTRSLRFL 193
               +L   + F 
Sbjct: 258 TDQELLRNLVAFY 270


>gi|299065648|emb|CBJ36820.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Ralstonia solanacearum CMR15]
          Length = 398

 Score =  259 bits (663), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 103/191 (53%), Positives = 132/191 (69%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
           N   +      +RVN  DKR++N  +DVNQL+P KY WAWEKYL+ C NHWMP E+ M  
Sbjct: 50  NNPNAAAAQSSRRVNAADKRVINGATDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSR 109

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWK  NGLT+DER +IKRNLGFF +++SL ANNIVL  YR ++ PECRQYLLRQAFE
Sbjct: 110 DIALWKDPNGLTEDERRIIKRNLGFFVTADSLAANNIVLGTYRQITAPECRQYLLRQAFE 169

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QYI+ SLGL+E E+FN Y EV SI  K  + + +  TL+ PSF         
Sbjct: 170 EAIHTHAYQYIVESLGLNEAEIFNAYHEVQSIRDKDEFLIPFIDTLTDPSFKTGTPENDQ 229

Query: 184 RILTRSLRFLC 194
           ++L   + F C
Sbjct: 230 KLLKSLIVFAC 240


>gi|241664219|ref|YP_002982579.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
           pickettii 12D]
 gi|309783064|ref|ZP_07677783.1| ribonucleoside-diphosphate reductase, beta subunit [Ralstonia sp.
           5_7_47FAA]
 gi|240866246|gb|ACS63907.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12D]
 gi|308918172|gb|EFP63850.1| ribonucleoside-diphosphate reductase, beta subunit [Ralstonia sp.
           5_7_47FAA]
          Length = 402

 Score =  259 bits (663), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 102/180 (56%), Positives = 130/180 (72%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           +RVN  DKR++N  +DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALWK  NGL
Sbjct: 65  RRVNAADKRVINGATDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALWKDPNGL 124

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           T+DER +IKRNLGFF +++SL ANNIVL  YR ++ PECRQYLLRQAFEEA+H+H +QYI
Sbjct: 125 TEDERRIIKRNLGFFVTADSLAANNIVLGTYRQITAPECRQYLLRQAFEEAIHTHAYQYI 184

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + SLGL+E E+FN Y EV SI  K  + + +  TL+ PSF         ++L   + F C
Sbjct: 185 VESLGLNEAEIFNAYHEVQSIRDKDEFLIPFIDTLTDPSFKTGTPENDQKLLKSLIVFAC 244


>gi|113869188|ref|YP_727677.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
           eutropha H16]
 gi|113527964|emb|CAJ94309.1| Ribonucleoside-diphosphate reductase beta subunit [Ralstonia
           eutropha H16]
          Length = 395

 Score =  259 bits (663), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 102/187 (54%), Positives = 131/187 (70%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           +      +RVN  DKR++N  +DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+AL
Sbjct: 51  AAAAQSNRRVNAADKRVINGSTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIAL 110

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           WK  NGLT+DER +IKRNLGFF +++SL ANNIVL  YR ++ PECRQYLLRQAFEEA+H
Sbjct: 111 WKDPNGLTEDERRIIKRNLGFFVTADSLAANNIVLGTYRQITAPECRQYLLRQAFEEAIH 170

Query: 128 SHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILT 187
           +H +QYI+ SLGL+E E+FN Y EV SI  K  + + +  TL+ PSF         ++L 
Sbjct: 171 THAYQYIVESLGLNEAEIFNAYHEVQSIRDKDEFLIPFIDTLTDPSFKTGTPENDQKLLK 230

Query: 188 RSLRFLC 194
             + F C
Sbjct: 231 SLIVFAC 237


>gi|17547523|ref|NP_520925.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
           solanacearum GMI1000]
 gi|17429827|emb|CAD16511.1| putative transmembrane ribonucleoside reductase (small chain)
           oxidoreductase protein [Ralstonia solanacearum GMI1000]
          Length = 400

 Score =  259 bits (663), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 103/191 (53%), Positives = 132/191 (69%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
           N   +      +RVN  DKR++N  +DVNQL+P KY WAWEKYL+ C NHWMP E+ M  
Sbjct: 52  NNPNAAAAQSSRRVNAADKRVINGATDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSR 111

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWK  NGLT+DER +IKRNLGFF +++SL ANNIVL  YR ++ PECRQYLLRQAFE
Sbjct: 112 DIALWKDPNGLTEDERRIIKRNLGFFVTADSLAANNIVLGTYRQITAPECRQYLLRQAFE 171

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QYI+ SLGL+E E+FN Y EV SI  K  + + +  TL+ PSF         
Sbjct: 172 EAIHTHAYQYIVESLGLNEAEIFNAYHEVQSIRDKDEFLIPFIDTLTDPSFKTGTPENDQ 231

Query: 184 RILTRSLRFLC 194
           ++L   + F C
Sbjct: 232 KLLKSLIVFAC 242


>gi|300690381|ref|YP_003751376.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Ralstonia solanacearum PSI07]
 gi|299077441|emb|CBJ50067.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Ralstonia solanacearum PSI07]
          Length = 402

 Score =  259 bits (662), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 103/191 (53%), Positives = 132/191 (69%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
           N   +      +RVN  DKR++N  +DVNQL+P KY WAWEKYL+ C NHWMP E+ M  
Sbjct: 54  NNPNAAAAQSNRRVNAADKRVINGATDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSR 113

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWK  NGLT+DER +IKRNLGFF +++SL ANNIVL  YR ++ PECRQYLLRQAFE
Sbjct: 114 DIALWKDPNGLTEDERRIIKRNLGFFVTADSLAANNIVLGTYRQITAPECRQYLLRQAFE 173

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QYI+ SLGL+E E+FN Y EV SI  K  + + +  TL+ PSF         
Sbjct: 174 EAIHTHAYQYIVESLGLNEAEIFNAYHEVQSIRDKDEFLIPFIDTLTDPSFKTGTPENDQ 233

Query: 184 RILTRSLRFLC 194
           ++L   + F C
Sbjct: 234 KLLKSLIVFAC 244


>gi|254784923|ref|YP_003072351.1| ribonucleotide-diphosphate reductase subunit beta [Teredinibacter
           turnerae T7901]
 gi|237687536|gb|ACR14800.1| ribonucleoside-diphosphate reductase [Teredinibacter turnerae
           T7901]
          Length = 453

 Score =  259 bits (662), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 108/188 (57%), Positives = 143/188 (76%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G  R+ VDDKRM+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  D+
Sbjct: 108 GLEELEMGAARIEVDDKRMINCRADLNQLVPFKYEWAWQKYLDGCANHWMPQEVNMTADV 167

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           A+WKS+ GL+ DER ++ R+LG+F++++SLVANN+VLAIYRH++NPE RQYLLRQAFEEA
Sbjct: 168 AIWKSEEGLSADERKIVMRSLGYFSTADSLVANNLVLAIYRHITNPEARQYLLRQAFEEA 227

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMYREVPS+  KA W++ +TQ +S P FH         +
Sbjct: 228 IHTHAYQYCIESLGMDEGEVFNMYREVPSVAKKAAWSITHTQGISDPQFHTGTPEADQEL 287

Query: 186 LTRSLRFL 193
           L   + F 
Sbjct: 288 LRNLIGFY 295


>gi|73542624|ref|YP_297144.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
           eutropha JMP134]
 gi|72120037|gb|AAZ62300.1| Ribonucleoside-diphosphate reductase [Ralstonia eutropha JMP134]
          Length = 394

 Score =  259 bits (662), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 102/191 (53%), Positives = 131/191 (68%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
           N   +      +RVN  DKR++N  +DVNQL+P KY WAWEKYL+ C NHWMP E+ M  
Sbjct: 46  NNPNAAAAQSNRRVNAADKRVINGSTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSR 105

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+A WK  NGLT+DER +IKRNLGFF +++SL ANNIVL  YR ++ PECRQYLLRQAFE
Sbjct: 106 DIATWKDPNGLTEDERRIIKRNLGFFVTADSLAANNIVLGTYRQITAPECRQYLLRQAFE 165

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QYI+ SLGL+E E+FN Y EV SI  K  + + +  TL+ PSF         
Sbjct: 166 EAIHTHAYQYIVESLGLNEAEIFNAYHEVQSIRDKDEFLIPFIDTLTDPSFKTGTPENDQ 225

Query: 184 RILTRSLRFLC 194
           ++L   + F C
Sbjct: 226 KLLKSLIVFAC 236


>gi|83746810|ref|ZP_00943858.1| Ribonucleoside-diphosphate reductase beta chain [Ralstonia
           solanacearum UW551]
 gi|207721465|ref|YP_002251905.1| transmembrane ribonucleoside reductase (small chain) protein
           [Ralstonia solanacearum MolK2]
 gi|83726579|gb|EAP73709.1| Ribonucleoside-diphosphate reductase beta chain [Ralstonia
           solanacearum UW551]
 gi|206586625|emb|CAQ17211.1| transmembrane ribonucleoside reductase (small chain) protein
           [Ralstonia solanacearum MolK2]
          Length = 402

 Score =  259 bits (662), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 103/191 (53%), Positives = 132/191 (69%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
           N   +      +RVN  DKR++N  +DVNQL+P KY WAWEKYL+ C NHWMP E+ M  
Sbjct: 54  NNPNAAAAQSNRRVNAADKRVINGATDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSR 113

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWK  NGLT+DER +IKRNLGFF +++SL ANNIVL  YR ++ PECRQYLLRQAFE
Sbjct: 114 DIALWKDPNGLTEDERRIIKRNLGFFVTADSLAANNIVLGTYRQITAPECRQYLLRQAFE 173

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QYI+ SLGL+E E+FN Y EV SI  K  + + +  TL+ PSF         
Sbjct: 174 EAIHTHAYQYIVESLGLNEAEIFNAYHEVQSIRDKDEFLIPFIDTLTDPSFKTGTPENDQ 233

Query: 184 RILTRSLRFLC 194
           ++L   + F C
Sbjct: 234 KLLKSLIVFAC 244


>gi|299134880|ref|ZP_07028072.1| Ribonucleoside-diphosphate reductase [Afipia sp. 1NLS2]
 gi|298590690|gb|EFI50893.1| Ribonucleoside-diphosphate reductase [Afipia sp. 1NLS2]
          Length = 373

 Score =  259 bits (662), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 137/191 (71%), Positives = 154/191 (80%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
             TGL  I     RV+VD+KRM+N R+DVNQLLPLKY WAWEKYL+ CNNHWMPTEV MQ
Sbjct: 24  EQTGLGAIDRSGGRVSVDEKRMINCRADVNQLLPLKYKWAWEKYLAGCNNHWMPTEVSMQ 83

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D+ALWKS++GLTDDER  IKRNLGFFA+SESLVANNIVLAIYRHL+NPECRQYLLRQAF
Sbjct: 84  ADIALWKSRDGLTDDERRAIKRNLGFFAASESLVANNIVLAIYRHLTNPECRQYLLRQAF 143

Query: 123 EEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRR 182
           EEAVH+HTFQYI+ SLGLDEGELFNMYREVPSIT KA WAL++TQ L +P F    +   
Sbjct: 144 EEAVHTHTFQYIVESLGLDEGELFNMYREVPSITDKAAWALKHTQNLDNPDFSTGTQEAD 203

Query: 183 SRILTRSLRFL 193
              L   + F 
Sbjct: 204 QSFLRDLVAFY 214


>gi|330815478|ref|YP_004359183.1| Ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           gladioli BSR3]
 gi|327367871|gb|AEA59227.1| Ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           gladioli BSR3]
          Length = 407

 Score =  259 bits (662), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 101/187 (54%), Positives = 136/187 (72%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           +     ++RVN+ DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+AL
Sbjct: 63  ASAAGSQERVNIADKRIINGKTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIAL 122

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           WK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H
Sbjct: 123 WKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIH 182

Query: 128 SHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILT 187
           +H +QYI+ SLGLDEGE+FN Y E+ SI  K  + + +  TL+ P+F         ++L 
Sbjct: 183 THAYQYIVESLGLDEGEMFNAYHEITSIRDKDEFLIPFIHTLTDPAFVTGTPEADQKLLK 242

Query: 188 RSLRFLC 194
             + F C
Sbjct: 243 SLIVFAC 249


>gi|145588393|ref|YP_001154990.1| ribonucleotide-diphosphate reductase subunit beta [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
 gi|145046799|gb|ABP33426.1| Ribonucleoside-diphosphate reductase [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 394

 Score =  259 bits (661), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 106/199 (53%), Positives = 138/199 (69%), Gaps = 6/199 (3%)

Query: 2   ANNTGLSPIQAG------EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWM 55
              T  +P++A         RVN  DKR++NA++DVNQL+P KY WAWEKYL+ C NHWM
Sbjct: 38  PQTTAPAPVEAANLSGGAALRVNAADKRVINAKTDVNQLVPFKYKWAWEKYLAGCANHWM 97

Query: 56  PTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQ 115
           P E+ M  D+ALWK  NGLT+DER +IKRNLGFF +++SL ANNIVL  YRH++ PECRQ
Sbjct: 98  PQEINMNRDIALWKDPNGLTEDERRIIKRNLGFFTTADSLAANNIVLGTYRHITAPECRQ 157

Query: 116 YLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFH 175
           YLLRQAFEEA+H+H +QYI+ SLGLD+ E+FN Y E+ SI AK  + + Y   L++P+F 
Sbjct: 158 YLLRQAFEEAIHTHAYQYIVESLGLDQSEIFNAYNEIESIRAKDEFLIPYIDVLTNPNFK 217

Query: 176 YWNKRRRSRILTRSLRFLC 194
                    +L   + F C
Sbjct: 218 TGTLETDQTLLRSLIVFAC 236


>gi|187930114|ref|YP_001900601.1| ribonucleotide-diphosphate reductase subunit beta [Ralstonia
           pickettii 12J]
 gi|187727004|gb|ACD28169.1| Ribonucleoside-diphosphate reductase [Ralstonia pickettii 12J]
          Length = 402

 Score =  259 bits (661), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 102/191 (53%), Positives = 131/191 (68%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
           N   +      +RVN  DKR++N  +DVNQL+P KY WAWEKYL+ C NHWMP E+ M  
Sbjct: 54  NNPNAAAAQSNRRVNAADKRVINGATDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSR 113

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+A WK  NGLT+DER +IKRNLGFF +++SL ANNIVL  YR ++ PECRQYLLRQAFE
Sbjct: 114 DIATWKDPNGLTEDERRIIKRNLGFFVTADSLAANNIVLGTYRQITAPECRQYLLRQAFE 173

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QYI+ SLGL+E E+FN Y EV SI  K  + + +  TL+ PSF         
Sbjct: 174 EAIHTHAYQYIVESLGLNEAEIFNAYHEVQSIRDKDEFLIPFIDTLTDPSFKTGTPENDQ 233

Query: 184 RILTRSLRFLC 194
           ++L   + F C
Sbjct: 234 KLLKSLIVFAC 244


>gi|239813962|ref|YP_002942872.1| ribonucleotide-diphosphate reductase subunit beta [Variovorax
           paradoxus S110]
 gi|239800539|gb|ACS17606.1| Ribonucleoside-diphosphate reductase [Variovorax paradoxus S110]
          Length = 391

 Score =  258 bits (660), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 101/179 (56%), Positives = 129/179 (72%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           RV   DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+ALWK  NGLT
Sbjct: 55  RVKASDKRIINGQTDVNQLVPFKYKWAWEKYLATCANHWMPQEVNMTRDIALWKDPNGLT 114

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           +DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +QYI+
Sbjct: 115 EDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYIV 174

Query: 136 TSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            SLGLDE E+FN Y EVPSI  K  + + +   +S P+F          +L   + F C
Sbjct: 175 ESLGLDESEIFNAYNEVPSIREKDQFLIPFIDAISDPNFKTGTHETDQTLLKSLIVFAC 233


>gi|72163401|ref|YP_291058.1| ribonucleotide-diphosphate reductase subunit beta [Thermobifida
           fusca YX]
 gi|71917133|gb|AAZ57035.1| ribonucleoside-diphosphate reductase [Thermobifida fusca YX]
          Length = 354

 Score =  258 bits (660), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 140/191 (73%), Positives = 161/191 (84%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           N TGL  IQ+G  RV+V+DKRM+N+R+DVNQLLPLKY WAWEKYL+ACNNHWMPTEV MQ
Sbjct: 5   NTTGLGEIQSGAARVDVEDKRMINSRADVNQLLPLKYRWAWEKYLAACNNHWMPTEVSMQ 64

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D+ALWKSK+GLT+DERLM+KRNLGFFA++ESLVANNIVLA+YRHL+NPECRQYLLRQAF
Sbjct: 65  ADIALWKSKDGLTEDERLMVKRNLGFFATAESLVANNIVLAVYRHLTNPECRQYLLRQAF 124

Query: 123 EEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRR 182
           EEAVH+HTFQYI  SLGLDEGELFNMYREVPSITAK  WAL+YT+ L +P+F        
Sbjct: 125 EEAVHTHTFQYICESLGLDEGELFNMYREVPSITAKDAWALRYTRNLENPNFTTGTPEAD 184

Query: 183 SRILTRSLRFL 193
              L   + F 
Sbjct: 185 QAFLRDLVAFY 195


>gi|74317993|ref|YP_315733.1| ribonucleotide-diphosphate reductase subunit beta [Thiobacillus
           denitrificans ATCC 25259]
 gi|74057488|gb|AAZ97928.1| ribonucleoside-diphosphate reductase beta chain [Thiobacillus
           denitrificans ATCC 25259]
          Length = 376

 Score =  258 bits (660), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 98/181 (54%), Positives = 127/181 (70%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
             RV   DKR++N  +DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+A WK    
Sbjct: 38  TTRVRASDKRVINGATDVNQLVPFKYKWAWEKYLAGCANHWMPQEVNMSRDIAQWKDPTA 97

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           LT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQYLLRQAFEEA+H+H +QY
Sbjct: 98  LTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQY 157

Query: 134 IITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           I+ SLGLDE E+FN Y E+ SI  K ++ + +  TL++P F         ++L   + F 
Sbjct: 158 IVESLGLDEAEIFNAYHEIESIRDKDDFLIPFIDTLTNPEFKTGTPENDQKLLKSLIVFA 217

Query: 194 C 194
           C
Sbjct: 218 C 218


>gi|167586060|ref|ZP_02378448.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           ubonensis Bu]
          Length = 403

 Score =  258 bits (660), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 104/179 (58%), Positives = 134/179 (74%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALWK  NGLT
Sbjct: 67  RVNVADKRIINGQTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALWKDPNGLT 126

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           +DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +QYI+
Sbjct: 127 EDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYIV 186

Query: 136 TSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            SLGLDEGE+FN Y EV SI AK  + + +  TL+ P+F         ++L   + F C
Sbjct: 187 ESLGLDEGEIFNAYHEVASIRAKDEFLIPFIHTLTDPAFKTGTLEADQKLLKSLIVFAC 245


>gi|226227154|ref|YP_002761260.1| ribonucleoside-diphosphate reductase beta subunit [Gemmatimonas
           aurantiaca T-27]
 gi|226090345|dbj|BAH38790.1| ribonucleoside-diphosphate reductase beta subunit [Gemmatimonas
           aurantiaca T-27]
          Length = 371

 Score =  258 bits (660), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 138/190 (72%), Positives = 151/190 (79%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
            TGL  I     RV VDDK M+N R+DVNQLLPLKY WAWEKYLS CNNHWMPTEV MQ 
Sbjct: 23  ATGLGEIDRHGGRVRVDDKAMINCRADVNQLLPLKYRWAWEKYLSGCNNHWMPTEVSMQA 82

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           DLA+W+S++GLTDDER  IKRNLGFFA+SESLVANNIVLAIYRHL+NPECRQYLLRQAFE
Sbjct: 83  DLAIWRSRDGLTDDERRAIKRNLGFFAASESLVANNIVLAIYRHLTNPECRQYLLRQAFE 142

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+HTFQYI  SLGLDEGELFNMYREVPSITAKA WAL+YTQ L+ P F         
Sbjct: 143 EAIHTHTFQYICESLGLDEGELFNMYREVPSITAKAAWALKYTQHLADPGFSTGTPETDQ 202

Query: 184 RILTRSLRFL 193
             L   + F 
Sbjct: 203 AFLRDLVAFY 212


>gi|92119123|ref|YP_578852.1| ribonucleotide-diphosphate reductase subunit beta [Nitrobacter
           hamburgensis X14]
 gi|91802017|gb|ABE64392.1| Ribonucleoside-diphosphate reductase [Nitrobacter hamburgensis X14]
          Length = 416

 Score =  258 bits (660), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 140/192 (72%), Positives = 154/192 (80%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
            + TGL  I     RV VDDKRM+NAR+DVNQLLPLKYGWAWEKYLS CNNHWMPTEV M
Sbjct: 66  TDATGLGAIDRSGGRVRVDDKRMINARADVNQLLPLKYGWAWEKYLSGCNNHWMPTEVSM 125

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
           Q D+ALWKSK+GLTDDER M+KRNLGFFA+SESLVANNIVLAIYRHL+NPECRQYLLRQA
Sbjct: 126 QADIALWKSKDGLTDDERRMVKRNLGFFAASESLVANNIVLAIYRHLTNPECRQYLLRQA 185

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRR 181
           FEEAVH+HTFQYI+ SLGLDEGELFNMYREV SIT KA WAL++T+ L  P F       
Sbjct: 186 FEEAVHTHTFQYIVESLGLDEGELFNMYREVSSITDKAAWALKHTRHLDDPGFKTGTPEA 245

Query: 182 RSRILTRSLRFL 193
               L   + F 
Sbjct: 246 DQAFLRDLVAFY 257


>gi|330430727|gb|AEC22061.1| ribonucleoside-diphosphate reductase beta chain [Pusillimonas sp.
           T7-7]
          Length = 387

 Score =  258 bits (660), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 99/182 (54%), Positives = 130/182 (71%)

Query: 13  GEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
           G  RV   DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D++LWK+ N
Sbjct: 48  GSGRVRAADKRIINGKTDVNQLVPFKYKWAWEKYLATCANHWMPQEINMSRDISLWKNPN 107

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
           GLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +Q
Sbjct: 108 GLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQ 167

Query: 133 YIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           YI+ SL LDE E+FN Y EVPSI AK  + + +   ++ P F          +L   + F
Sbjct: 168 YIVESLDLDEAEIFNAYNEVPSIRAKDEFLIPFIDAIADPHFQTGTPEADQTLLKSLIVF 227

Query: 193 LC 194
            C
Sbjct: 228 AC 229


>gi|307546480|ref|YP_003898959.1| ribonucleotide-diphosphate reductase subunit beta [Halomonas
           elongata DSM 2581]
 gi|307218504|emb|CBV43774.1| ribonucleotide-diphosphate reductase subunit beta [Halomonas
           elongata DSM 2581]
          Length = 415

 Score =  258 bits (660), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 108/191 (56%), Positives = 148/191 (77%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
             GL  ++ G  R+ VDDK+M+NAR+D+NQL+P KY WAW+KYL    NHWMP EV M  
Sbjct: 67  AAGLEELEMGAARIEVDDKQMINARADLNQLVPFKYEWAWQKYLDGSANHWMPQEVNMNA 126

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWKS +GLTDDER +++R+LG+F++++SLVANN+VLA+YR ++NPECRQYLLRQAFE
Sbjct: 127 DIALWKSADGLTDDERRIVERSLGYFSTADSLVANNLVLALYRLITNPECRQYLLRQAFE 186

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QY + SL +DEGE+FNMYRE+PS+ AK+ W+L++TQ+L+ P FH        
Sbjct: 187 EAIHTHAYQYCVESLAMDEGEVFNMYREIPSVAAKSAWSLKHTQSLARPDFHTGTPETDQ 246

Query: 184 RILTRSLRFLC 194
            +L   + F C
Sbjct: 247 ELLRNLVAFYC 257


>gi|329893650|ref|ZP_08269784.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma
           proteobacterium IMCC3088]
 gi|328923577|gb|EGG30889.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma
           proteobacterium IMCC3088]
          Length = 432

 Score =  258 bits (659), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 104/194 (53%), Positives = 142/194 (73%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           M    GL  ++ G  RV+VD+K M+N R+D+NQL+P KY WAW+KY+  C NHWMP E+ 
Sbjct: 81  MDLAPGLEELELGAARVSVDEKAMINCRADLNQLVPFKYDWAWQKYIDGCANHWMPQEIN 140

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+A WKS + L+DDER ++ R+LG+F++++SLVANN+VL IYR ++NPECRQYLLRQ
Sbjct: 141 MTADVATWKSADVLSDDERRIVMRSLGYFSTADSLVANNLVLGIYRLITNPECRQYLLRQ 200

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QY I SLG+DEGE+FNMYRE+PS+  KA W+L +T +LS P+F      
Sbjct: 201 AFEEAIHTHAYQYCIESLGMDEGEVFNMYREIPSVAKKATWSLSHTHSLSDPNFKTGTTE 260

Query: 181 RRSRILTRSLRFLC 194
               +L   + F  
Sbjct: 261 NDQTLLRNLIGFYA 274


>gi|256377255|ref|YP_003100915.1| ribonucleoside-diphosphate reductase [Actinosynnema mirum DSM
           43827]
 gi|255921558|gb|ACU37069.1| Ribonucleoside-diphosphate reductase [Actinosynnema mirum DSM
           43827]
          Length = 358

 Score =  258 bits (659), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 131/188 (69%), Positives = 151/188 (80%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  I+ G  RV+VDDK M+NAR+DVNQLLPLKY WAWEKYL+ C NHWMPTEV MQ D+
Sbjct: 12  GLGEIERGAGRVHVDDKAMINARADVNQLLPLKYHWAWEKYLAGCANHWMPTEVSMQADI 71

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALW+S NGLT DER  IKRNLGFFA+SESLVANN+VLA+YR+++NPECRQYLLRQAFEEA
Sbjct: 72  ALWRSPNGLTADERHAIKRNLGFFATSESLVANNVVLAVYRNITNPECRQYLLRQAFEEA 131

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           VH+HTF+YI +SLGLDEGELFNMYREVPSIT KA WAL+YT++L  P F           
Sbjct: 132 VHTHTFEYICSSLGLDEGELFNMYREVPSITDKAAWALKYTKSLEDPEFRTGTPEADQAF 191

Query: 186 LTRSLRFL 193
           L   + F 
Sbjct: 192 LRDLVAFY 199


>gi|331006663|ref|ZP_08329944.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma
           proteobacterium IMCC1989]
 gi|330419531|gb|EGG93916.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit [gamma
           proteobacterium IMCC1989]
          Length = 444

 Score =  258 bits (659), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 105/194 (54%), Positives = 144/194 (74%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +    G+  ++ G  RV VD+K M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV 
Sbjct: 93  IDPTPGIEELEMGAARVGVDEKAMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVN 152

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D++LWK  +GL+DDER +I R+LG+F++++SLVANN+VLA+YR ++NPECRQYLLRQ
Sbjct: 153 MTADISLWKDPDGLSDDERRIIMRSLGYFSTADSLVANNLVLAVYRLITNPECRQYLLRQ 212

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QY I SLG+DEGE+FNMYREVPS+  KA W++ +TQ +S P+F+     
Sbjct: 213 AFEEAIHTHAYQYCIESLGMDEGEIFNMYREVPSVANKAAWSIAHTQGISDPTFNTGTTE 272

Query: 181 RRSRILTRSLRFLC 194
               +L   + F  
Sbjct: 273 TDQELLRNLIGFYA 286


>gi|171057074|ref|YP_001789423.1| ribonucleotide-diphosphate reductase subunit beta [Leptothrix
           cholodnii SP-6]
 gi|170774519|gb|ACB32658.1| Ribonucleoside-diphosphate reductase [Leptothrix cholodnii SP-6]
          Length = 402

 Score =  258 bits (659), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 102/180 (56%), Positives = 127/180 (70%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           +RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+A WK  NGL
Sbjct: 65  RRVNVADKRIINGQTDVNQLVPFKYKWAWEKYLATCANHWMPQEVNMSRDIATWKDPNGL 124

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           TDDER +IKRNLGFF +++SL ANNI L  YRH++ PECRQ+LLRQAFEEA+H+H +QYI
Sbjct: 125 TDDERRLIKRNLGFFVTADSLAANNITLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYI 184

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + SLGLDE E+FN Y EV SI  K  + + Y   +  P F          +L   + F C
Sbjct: 185 VESLGLDESEIFNAYHEVASIREKDEFLIPYIDAIMDPHFKTGTPENDQTLLKSLIVFAC 244


>gi|194290770|ref|YP_002006677.1| ribonucleotide-diphosphate reductase subunit beta [Cupriavidus
           taiwanensis LMG 19424]
 gi|193224605|emb|CAQ70616.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Cupriavidus taiwanensis LMG 19424]
          Length = 396

 Score =  258 bits (659), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 103/191 (53%), Positives = 132/191 (69%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
           N   +      +RVN  DKR++N  +DVNQL+P KY WAWEKYL+ C NHWMP E+ M  
Sbjct: 48  NNPNAAAAQSNRRVNAADKRVINGSTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSR 107

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWK  NGLT+DER +IKRNLGFF +++SL ANNIVL  YR ++ PECRQYLLRQAFE
Sbjct: 108 DIALWKDPNGLTEDERRIIKRNLGFFVTADSLAANNIVLGTYRQITAPECRQYLLRQAFE 167

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QYI+ SLGL+E E+FN Y EV SI  K  + + +  TL+ PSF         
Sbjct: 168 EAIHTHAYQYIVESLGLNEAEIFNAYHEVQSIRDKDEFLIPFIDTLTDPSFKTGTPENDQ 227

Query: 184 RILTRSLRFLC 194
           ++L   + F C
Sbjct: 228 KLLKSLIVFAC 238


>gi|124268397|ref|YP_001022401.1| ribonucleotide-diphosphate reductase subunit beta [Methylibium
           petroleiphilum PM1]
 gi|124261172|gb|ABM96166.1| Ribonucleoside-diphosphate reductase [Methylibium petroleiphilum
           PM1]
          Length = 403

 Score =  257 bits (658), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 105/194 (54%), Positives = 135/194 (69%), Gaps = 1/194 (0%)

Query: 2   ANNTGLSP-IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           A    + P   AG +RVNV DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP EV 
Sbjct: 52  AAAHAVKPSAAAGTRRVNVADKRIINGQTDVNQLVPFKYKWAWEKYLATCANHWMPQEVN 111

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+A WK  NGL++DER +IKRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQ
Sbjct: 112 MSRDIATWKDPNGLSEDERRIIKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQ 171

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYI+ SLGLDE E+FN Y EV SI  K  + + +   +  P+FH     
Sbjct: 172 AFEEAIHTHAYQYIVESLGLDESEIFNAYNEVQSIRDKDEFLIPFIGAIMDPNFHTGTLE 231

Query: 181 RRSRILTRSLRFLC 194
               +L   + F C
Sbjct: 232 NDRTLLKSLIVFAC 245


>gi|253997287|ref|YP_003049351.1| Ribonucleoside-diphosphate reductase [Methylotenera mobilis JLW8]
 gi|253983966|gb|ACT48824.1| Ribonucleoside-diphosphate reductase [Methylotenera mobilis JLW8]
          Length = 377

 Score =  257 bits (658), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 100/180 (55%), Positives = 129/180 (71%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
            RVN  DKRM+N ++DVNQL+P KY WAW+KYL+ C NHWMP EV M  D+A WK    L
Sbjct: 40  GRVNASDKRMINGQTDVNQLVPFKYHWAWDKYLAGCANHWMPQEVSMSRDIAQWKDSTAL 99

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           TDDERL++KRNLGFF +++SL ANNIVL  YRH++ PE RQYLLRQ FEEA+H+H +QYI
Sbjct: 100 TDDERLIVKRNLGFFTTADSLAANNIVLGTYRHITAPEARQYLLRQGFEEAIHTHAYQYI 159

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + SLGLDE E+FN Y+EV SI  K ++ + +  TL++P F         ++L   + F C
Sbjct: 160 VESLGLDESEVFNAYQEVASIKDKDDFLIPFINTLTNPEFKTGTAEADQQLLRSLIVFAC 219


>gi|332039867|gb|EGI76262.1| ribonucleotide-diphosphate reductase subunit beta [Hylemonella
           gracilis ATCC 19624]
          Length = 399

 Score =  257 bits (658), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 102/194 (52%), Positives = 133/194 (68%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +A     S   +G  R+   DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP EV 
Sbjct: 48  IAAPQSASHAPSGTHRIKASDKRIINGQTDVNQLVPFKYKWAWEKYLATCANHWMPQEVN 107

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWK  NGL++DER +IKRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQ
Sbjct: 108 MNRDIALWKDPNGLSEDERRIIKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQ 167

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QYI+ SLGLDE E+F+ Y EV SI  K  + L +   +  P+FH     
Sbjct: 168 AFEEAIHTHAYQYIVESLGLDESEIFSAYLEVQSIRDKDEFLLPFINAIMDPNFHTGTLE 227

Query: 181 RRSRILTRSLRFLC 194
               +L   + F C
Sbjct: 228 TDQTLLKSLIVFAC 241


>gi|88705571|ref|ZP_01103281.1| ribonucleoside-diphosphate reductase, beta subunit [Congregibacter
           litoralis KT71]
 gi|88700084|gb|EAQ97193.1| ribonucleoside-diphosphate reductase, beta subunit [Congregibacter
           litoralis KT71]
          Length = 469

 Score =  257 bits (657), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 104/189 (55%), Positives = 141/189 (74%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           GL  ++ G  RV++D+K M+N R+D+NQL+P KY WAW+KY+  C NHWMP EV M  D+
Sbjct: 123 GLEELEMGASRVSIDEKAMINCRADLNQLVPFKYDWAWQKYIDGCANHWMPQEVNMTADV 182

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           A WK+  GLTDDER ++ R+LG+F++++SLVANN+VLA+YR ++NPECRQYLLRQAFEEA
Sbjct: 183 ATWKNPEGLTDDERRIVLRSLGYFSTADSLVANNLVLAVYRLITNPECRQYLLRQAFEEA 242

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QY I SLG+DEGE+FNMYREVPS+  KA W++ +T  LS P+F          +
Sbjct: 243 IHTHAYQYCIESLGMDEGEVFNMYREVPSVAKKAAWSISHTHELSDPNFRTGTLESDQTL 302

Query: 186 LTRSLRFLC 194
           L   + F  
Sbjct: 303 LRNLIGFYA 311


>gi|114332419|ref|YP_748641.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosomonas
           eutropha C91]
 gi|114309433|gb|ABI60676.1| Ribonucleoside-diphosphate reductase [Nitrosomonas eutropha C91]
          Length = 377

 Score =  257 bits (657), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 104/181 (57%), Positives = 138/181 (76%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
            +RV+V+DKR++N ++DVNQL+P KY WAWEKYLSAC NHWMP E+ M  D+ALWK  NG
Sbjct: 39  HRRVSVEDKRIINCKADVNQLVPFKYKWAWEKYLSACANHWMPQEINMTRDIALWKDPNG 98

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           LT+DER ++KRNLGFF +++SL ANNIVL  YRH++NPECRQYLLRQAFEEA+H+H +QY
Sbjct: 99  LTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITNPECRQYLLRQAFEEAIHTHAYQY 158

Query: 134 IITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           I+ S+GLDEGE+FN Y E+ SI  K  + + +  TL++P+F         ++L   + F 
Sbjct: 159 IVESIGLDEGEIFNAYHEIKSIRDKDEFLIPFIDTLTNPTFQTGTLETDQQLLKSLIVFA 218

Query: 194 C 194
           C
Sbjct: 219 C 219


>gi|171463021|ref|YP_001797134.1| Ribonucleoside-diphosphate reductase [Polynucleobacter necessarius
           subsp. necessarius STIR1]
 gi|171192559|gb|ACB43520.1| Ribonucleoside-diphosphate reductase [Polynucleobacter necessarius
           subsp. necessarius STIR1]
          Length = 394

 Score =  257 bits (656), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 102/179 (56%), Positives = 131/179 (73%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           RV   DKR++NA++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALWK  NGLT
Sbjct: 58  RVKAADKRVINAKTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMNRDIALWKDPNGLT 117

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           +DER +IKRNLGFF +++SL ANNIVL  YRH++ PECRQYLLRQAFEEA+H+H +QYI+
Sbjct: 118 EDERRIIKRNLGFFTTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQYIV 177

Query: 136 TSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            SLGLD+ E+FN Y E+ SI AK  + + Y   L++P+F          +L   + F C
Sbjct: 178 ESLGLDQSEIFNAYHEIDSIRAKDEFLIPYIDVLTNPNFKTGTLEADQTLLRSLIVFAC 236


>gi|326315613|ref|YP_004233285.1| ribonucleoside-diphosphate reductase [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323372449|gb|ADX44718.1| Ribonucleoside-diphosphate reductase [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 387

 Score =  257 bits (656), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 101/189 (53%), Positives = 131/189 (69%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
             +   A  +RVN  DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+
Sbjct: 41  AATSAPAQHRRVNAADKRIINGQTDVNQLVPFKYKWAWEKYLATCANHWMPQEVNMTRDI 100

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA
Sbjct: 101 ALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEA 160

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
           +H+H +QYI+ SLGLDE E+FN Y EV SI  K  + + + + +  P F          +
Sbjct: 161 IHTHAYQYIVESLGLDESEIFNAYNEVDSIRNKDEFLIPFIEAIMDPDFKTGTPETDQTL 220

Query: 186 LTRSLRFLC 194
           L   + F C
Sbjct: 221 LKSLIVFAC 229


>gi|121606275|ref|YP_983604.1| ribonucleotide-diphosphate reductase subunit beta [Polaromonas
           naphthalenivorans CJ2]
 gi|120595244|gb|ABM38683.1| Ribonucleoside-diphosphate reductase [Polaromonas naphthalenivorans
           CJ2]
          Length = 387

 Score =  257 bits (656), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 104/193 (53%), Positives = 132/193 (68%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           A       I A  KRV   DKR++N ++DVNQL+P KY WAWEKYL++C NHWMP EV M
Sbjct: 37  APPLDTHEIPAKAKRVKASDKRIINGQTDVNQLVPFKYKWAWEKYLASCANHWMPQEVNM 96

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D+ALWK  NGL+DDER ++ RNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQA
Sbjct: 97  TRDIALWKDPNGLSDDERRLVMRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQA 156

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRR 181
           FEEA+H+H +QYI  SLGLDEGE+FN Y EV SI  K  + + + + +S P F       
Sbjct: 157 FEEAIHTHAYQYITESLGLDEGEIFNAYNEVQSIKDKDQFLIPFIEAISDPGFKTGTLES 216

Query: 182 RSRILTRSLRFLC 194
              +L   + F C
Sbjct: 217 DQTLLKSLIVFAC 229


>gi|317402620|gb|EFV83180.1| ribonucleoside-diphosphate reductase subunit beta [Achromobacter
           xylosoxidans C54]
          Length = 399

 Score =  257 bits (656), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 101/183 (55%), Positives = 133/183 (72%)

Query: 12  AGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSK 71
           A  +RV V DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALWK+ 
Sbjct: 59  ATSQRVKVADKRIINGQTDVNQLVPFKYKWAWEKYLATCANHWMPQEINMSRDIALWKNP 118

Query: 72  NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
           NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +
Sbjct: 119 NGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAY 178

Query: 132 QYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           QYI+ SL LDE E+FN Y EVPSI AK  + + +   ++ P+F          +L   + 
Sbjct: 179 QYIVESLDLDEAEIFNAYNEVPSIRAKDEFLIPFIDAIADPNFKTGTPEADQTLLKSLIV 238

Query: 192 FLC 194
           F C
Sbjct: 239 FAC 241


>gi|89902117|ref|YP_524588.1| ribonucleotide-diphosphate reductase subunit beta [Rhodoferax
           ferrireducens T118]
 gi|89346854|gb|ABD71057.1| Ribonucleoside-diphosphate reductase [Rhodoferax ferrireducens
           T118]
          Length = 400

 Score =  257 bits (656), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 105/193 (54%), Positives = 136/193 (70%), Gaps = 1/193 (0%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           AN  G + +    +RVN  DKR++N ++DVNQL+P KY WAWEKYLS+C NHWMP EV M
Sbjct: 51  ANQRG-AAVSISPRRVNAADKRIINGKTDVNQLVPFKYKWAWEKYLSSCANHWMPQEVNM 109

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D+ALWK  NGLT+DER +IKRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQA
Sbjct: 110 TRDIALWKDPNGLTEDERRIIKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQA 169

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRR 181
           FEEA+H+H +QYI+ SLGLDE E+FN Y EV SI  K  + + + + +  P+F       
Sbjct: 170 FEEAIHTHAYQYIVESLGLDESEIFNAYNEVQSIRDKDEFLIPFIEAIMDPAFKTGTHEA 229

Query: 182 RSRILTRSLRFLC 194
              +L   + F C
Sbjct: 230 DQTLLKSLIVFAC 242


>gi|254483523|ref|ZP_05096750.1| ribonucleoside-diphosphate reductase, beta subunit [marine gamma
           proteobacterium HTCC2148]
 gi|214036244|gb|EEB76924.1| ribonucleoside-diphosphate reductase, beta subunit [marine gamma
           proteobacterium HTCC2148]
          Length = 425

 Score =  256 bits (655), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 109/194 (56%), Positives = 149/194 (76%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           M    GL  ++ G  RV+VD+K M+N R+D+NQL+PLKY WAW+KYL  C NHWMP E+ 
Sbjct: 74  MDVAAGLEELEMGASRVSVDEKAMINCRADLNQLVPLKYDWAWQKYLDGCANHWMPQEIN 133

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+A WKS +GL+DDER ++ R+LG+F++++SLVANN+VLA+YR ++NPECRQYLLRQ
Sbjct: 134 MTADVATWKSADGLSDDERRIVMRSLGYFSTADSLVANNLVLALYRLITNPECRQYLLRQ 193

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEA+H+H +QY I SLG+DEGE+FNMYREVPS+ AKA+W+L +T +LS P+F+   + 
Sbjct: 194 AFEEAIHTHAYQYCIESLGMDEGEVFNMYREVPSVAAKASWSLSHTHSLSDPTFNTGTQE 253

Query: 181 RRSRILTRSLRFLC 194
               +L   + F  
Sbjct: 254 TDQELLRNLIGFYA 267


>gi|255019430|ref|ZP_05291537.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Acidithiobacillus caldus ATCC 51756]
 gi|254971128|gb|EET28583.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Acidithiobacillus caldus ATCC 51756]
          Length = 345

 Score =  256 bits (655), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 105/181 (58%), Positives = 136/181 (75%)

Query: 13  GEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
              RV V+DKR++N R+DVNQL+P KY WAW+KYL+AC NHWMP EV M  D+ALWK   
Sbjct: 5   ATARVRVEDKRIINGRADVNQLVPFKYQWAWDKYLAACANHWMPQEVQMARDIALWKDPK 64

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
           GLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQYLLRQAFEEA+H+H +Q
Sbjct: 65  GLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQ 124

Query: 133 YIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           YI+ SLGLDEGE+FNMY EVPS+ AK  + + + +TL+ P F    +    ++L   + F
Sbjct: 125 YIVESLGLDEGEIFNMYHEVPSVRAKDEFLIPFIETLADPDFQTGTRENDQKLLRSLIVF 184

Query: 193 L 193
            
Sbjct: 185 A 185


>gi|30250346|ref|NP_842416.1| ribonucleotide-diphosphate reductase subunit beta [Nitrosomonas
           europaea ATCC 19718]
 gi|30181141|emb|CAD86334.1| Ribonucleotide reductase [Nitrosomonas europaea ATCC 19718]
          Length = 382

 Score =  256 bits (655), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 105/182 (57%), Positives = 137/182 (75%)

Query: 13  GEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
             +RV+V+DKR++N ++DVNQL+P KY WAWEKYLSAC NHWMP E+ M  D+ALWK  N
Sbjct: 43  DHRRVSVEDKRIINCKADVNQLVPFKYKWAWEKYLSACANHWMPQEINMTRDIALWKDPN 102

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
           GLT+DER ++KRNLGFF +++SL ANNIVL  YRH++NPECRQYLLRQAFEEA+H+H +Q
Sbjct: 103 GLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITNPECRQYLLRQAFEEAIHTHAYQ 162

Query: 133 YIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           YI+ S+GLDEGE+FN Y E+ SI  K  + + +  TL+ PSF         ++L   + F
Sbjct: 163 YIVESIGLDEGEIFNAYHEIGSIRDKDEFLIPFIDTLTDPSFRTGTLETDQQLLKSLIVF 222

Query: 193 LC 194
            C
Sbjct: 223 AC 224


>gi|134095932|ref|YP_001101007.1| ribonucleotide-diphosphate reductase subunit beta [Herminiimonas
           arsenicoxydans]
 gi|133739835|emb|CAL62886.1| Ribonucleoside-diphosphate reductase subunit beta (Ribonucleotide
           reductase small subunit) [Herminiimonas arsenicoxydans]
          Length = 395

 Score =  256 bits (655), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 99/182 (54%), Positives = 132/182 (72%)

Query: 13  GEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
             +R++  DKR++N ++DVNQL+P KY WAW+KYL+ C NHWMP E+ MQ D+ LWK+ N
Sbjct: 56  PTRRMDAADKRIINGKTDVNQLVPFKYKWAWDKYLAGCANHWMPQEINMQRDIELWKNPN 115

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
           GLTDDER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQYLLRQAFEEA+H+H +Q
Sbjct: 116 GLTDDERRLVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQ 175

Query: 133 YIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           YI+ SLGLDEGE+FN Y E+ SI  K  + + +   L+ P+F          +L   + F
Sbjct: 176 YIVESLGLDEGEIFNAYNEIESIRDKDQFLIPFIDVLTDPNFTTGTTENDQTLLRSLIVF 235

Query: 193 LC 194
            C
Sbjct: 236 AC 237


>gi|330892405|gb|EGH25066.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. mori str. 301020]
          Length = 415

 Score =  256 bits (655), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 103/191 (53%), Positives = 140/191 (73%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
             GL+ ++    RV VD+K M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV    
Sbjct: 67  AEGLAELEGASARVAVDEKMMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNKTA 126

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWK+  GLTDDER ++ RNLGFF++++SLVA+N+VLA+YR ++NPECRQY+LRQAFE
Sbjct: 127 DIALWKNPEGLTDDERRIVMRNLGFFSTADSLVAHNLVLAVYRLITNPECRQYILRQAFE 186

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QY I SL +DEGE+FNMY E+PS+  KA W L+YT+++S P F         
Sbjct: 187 EAIHTHAYQYCIESLAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSISDPKFETGTVETDK 246

Query: 184 RILTRSLRFLC 194
            +L   + + C
Sbjct: 247 ELLRNLIAYYC 257


>gi|149927167|ref|ZP_01915424.1| ribonucleotide-diphosphate reductase beta subunit [Limnobacter sp.
           MED105]
 gi|149824106|gb|EDM83327.1| ribonucleotide-diphosphate reductase beta subunit [Limnobacter sp.
           MED105]
          Length = 399

 Score =  256 bits (655), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 101/187 (54%), Positives = 130/187 (69%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           +   A   RVN  DKR++N  +DVNQL+P KY WAWEKYLS C NHWMP E+ M  D+AL
Sbjct: 55  AAEGAKAGRVNAADKRVINGTTDVNQLVPFKYKWAWEKYLSQCANHWMPQEINMDRDIAL 114

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           WK  NGLT+DERL++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAF+EA+H
Sbjct: 115 WKDPNGLTEDERLIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFDEAIH 174

Query: 128 SHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILT 187
           +H +QYI+ SLG+ E E FN Y E+  I AK ++ L +   L+ PSF          +L 
Sbjct: 175 THAYQYIVESLGIPEAETFNAYNEISCIKAKDDFLLPFIDVLTDPSFKTGTLEADQTLLK 234

Query: 188 RSLRFLC 194
             + F C
Sbjct: 235 SLIAFAC 241


>gi|319764328|ref|YP_004128265.1| ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans
           BC]
 gi|330826374|ref|YP_004389677.1| ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans
           K601]
 gi|317118889|gb|ADV01378.1| Ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans
           BC]
 gi|329311746|gb|AEB86161.1| Ribonucleoside-diphosphate reductase [Alicycliphilus denitrificans
           K601]
          Length = 396

 Score =  256 bits (654), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 100/181 (55%), Positives = 132/181 (72%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
            +RV+  DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALWK  NG
Sbjct: 58  HRRVSAVDKRIINGQTDVNQLVPFKYKWAWEKYLATCANHWMPQEINMTRDIALWKDPNG 117

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           LT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +QY
Sbjct: 118 LTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQY 177

Query: 134 IITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           I+ SLGLDEGE+FN Y EV SI AK  + + + + +  P+F          +L   + F 
Sbjct: 178 IVESLGLDEGEIFNAYNEVESIRAKDEFLIPFIEAIMDPAFKTGTPENDQTLLKSLIVFA 237

Query: 194 C 194
           C
Sbjct: 238 C 238


>gi|198284354|ref|YP_002220675.1| ribonucleotide-diphosphate reductase subunit beta
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|198248875|gb|ACH84468.1| Ribonucleoside-diphosphate reductase [Acidithiobacillus
           ferrooxidans ATCC 53993]
          Length = 374

 Score =  256 bits (654), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 100/192 (52%), Positives = 135/192 (70%), Gaps = 4/192 (2%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
             TG++  +    RV  +DKR++N  +DVNQL+P KY WAW+KYL+AC NHWMP E+ M 
Sbjct: 29  EETGMTSFE----RVRAEDKRIINGHADVNQLVPFKYQWAWDKYLAACANHWMPQEIQMS 84

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D+ALWK   GLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQY+LRQAF
Sbjct: 85  RDIALWKDPKGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQYMLRQAF 144

Query: 123 EEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRR 182
           EEA+H+H +QYI+ S+GLDEGE+FNMY EVPS+  K  + + +   L+ P F        
Sbjct: 145 EEAIHTHAYQYIVESIGLDEGEIFNMYHEVPSVRDKDQFLMPFIDVLADPHFKTGTLEND 204

Query: 183 SRILTRSLRFLC 194
            ++L   + F  
Sbjct: 205 QKLLRSLIVFAA 216


>gi|319791701|ref|YP_004153341.1| ribonucleoside-diphosphate reductase [Variovorax paradoxus EPS]
 gi|315594164|gb|ADU35230.1| Ribonucleoside-diphosphate reductase [Variovorax paradoxus EPS]
          Length = 411

 Score =  256 bits (654), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 101/180 (56%), Positives = 128/180 (71%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           +RV   DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+ALWK  NGL
Sbjct: 74  QRVKASDKRIINGQTDVNQLVPFKYKWAWEKYLATCANHWMPQEVNMTRDIALWKDPNGL 133

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           T+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +QYI
Sbjct: 134 TEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYI 193

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + SLGLDE E+FN Y EV SI  K  + L +   +S P F          +L   + F C
Sbjct: 194 VESLGLDESEIFNAYNEVQSIREKDQFLLPFIDAISDPHFKTGTHETDQTLLKSLIVFAC 253


>gi|238026167|ref|YP_002910398.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           glumae BGR1]
 gi|237875361|gb|ACR27694.1| Ribonucleoside-diphosphate reductase, beta subunit [Burkholderia
           glumae BGR1]
          Length = 407

 Score =  256 bits (654), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 101/181 (55%), Positives = 136/181 (75%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           ++RVN+ DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALWK  NG
Sbjct: 69  QERVNIADKRIINGKTDVNQLVPFKYKWAWEKYLAGCANHWMPQEINMSRDIALWKDPNG 128

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           LT+DER +++RNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +QY
Sbjct: 129 LTEDERRIVRRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQY 188

Query: 134 IITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           I+ SLGLDEGE+FN Y EV SI  K  + + +  TL+ P+F    +    ++L   + F 
Sbjct: 189 IVESLGLDEGEIFNAYHEVSSIRDKDEFLIPFIHTLTDPAFVTGTQDADQKLLKSLIVFA 248

Query: 194 C 194
           C
Sbjct: 249 C 249


>gi|241764092|ref|ZP_04762129.1| Ribonucleoside-diphosphate reductase [Acidovorax delafieldii 2AN]
 gi|241366556|gb|EER61044.1| Ribonucleoside-diphosphate reductase [Acidovorax delafieldii 2AN]
          Length = 398

 Score =  256 bits (654), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 102/181 (56%), Positives = 131/181 (72%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
            +RVN  DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+ALWK  NG
Sbjct: 60  HRRVNAADKRIINGQTDVNQLVPFKYKWAWEKYLATCANHWMPQEVNMTRDIALWKDPNG 119

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           LTDDER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +QY
Sbjct: 120 LTDDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQY 179

Query: 134 IITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           I+ SLGLDE E+FN Y EV SI  K  + + + + +  P+F         R+L   + F 
Sbjct: 180 IVESLGLDESEIFNAYNEVQSIRDKDEFLIPFIEAIMDPNFKTGTPEADQRLLKSLIVFA 239

Query: 194 C 194
           C
Sbjct: 240 C 240


>gi|226940720|ref|YP_002795794.1| ribonucleotide-diphosphate reductase subunit beta [Laribacter
           hongkongensis HLHK9]
 gi|226715647|gb|ACO74785.1| Ribonucleoside-diphosphate reductase beta chain [Laribacter
           hongkongensis HLHK9]
          Length = 357

 Score =  255 bits (653), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 105/191 (54%), Positives = 134/191 (70%), Gaps = 1/191 (0%)

Query: 5   TGLSPIQAGEK-RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
             +SP  +G   RVN  DKR++N  +DVNQL+P KY WAW+KYL+ C NHWMP EV MQ 
Sbjct: 9   VAVSPAGSGTGGRVNAVDKRIINGDTDVNQLVPFKYHWAWDKYLATCANHWMPQEVNMQR 68

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ LWK  NGLTDDER ++ RNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFE
Sbjct: 69  DIELWKRPNGLTDDERRIVIRNLGFFTTADSLAANNIVLGTYRHITAPECRQFLLRQAFE 128

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QYI+ SLGLDEGE+FN Y E+ SI AK  + + +  TL  P+F         
Sbjct: 129 EAIHTHAYQYIVESLGLDEGEVFNAYHEIASIRAKDEFLIPFIDTLCDPAFKTGTPESDQ 188

Query: 184 RILTRSLRFLC 194
            +L   + F C
Sbjct: 189 LLLKSLIVFAC 199


>gi|254516739|ref|ZP_05128798.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium NOR5-3]
 gi|219675162|gb|EED31529.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium NOR5-3]
          Length = 441

 Score =  255 bits (653), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 106/191 (55%), Positives = 142/191 (74%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
             GL  ++ G  RV++D+K M+N R+D+NQL+P KY WAW+KY+  C NHWMP EV M  
Sbjct: 93  AAGLEELEMGAARVSIDEKAMINCRADLNQLVPFKYDWAWQKYIDGCANHWMPQEVNMTA 152

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+A WK+  GLTDDER +I R+LG+F++++SLVANN+VLA+YR ++NPECRQYLLRQAFE
Sbjct: 153 DVATWKNPEGLTDDERRIILRSLGYFSTADSLVANNLVLAVYRLITNPECRQYLLRQAFE 212

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EA+H+H +QY I SLG+DEGE+FNMYREVPS+  KA W+L +T  LS P+F+        
Sbjct: 213 EAIHTHAYQYCIESLGMDEGEVFNMYREVPSVAKKAAWSLSHTHELSDPNFNTGTMESDQ 272

Query: 184 RILTRSLRFLC 194
            +L   + F  
Sbjct: 273 TLLRNLIGFYA 283


>gi|218665361|ref|YP_002427016.1| ribonucleoside-diphosphate reductase, beta subunit
           [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|218517574|gb|ACK78160.1| ribonucleoside-diphosphate reductase, beta subunit
           [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 380

 Score =  255 bits (652), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 100/192 (52%), Positives = 135/192 (70%), Gaps = 4/192 (2%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
             TG++  +    RV  +DKR++N  +DVNQL+P KY WAW+KYL+AC NHWMP E+ M 
Sbjct: 35  EETGMTSFE----RVRAEDKRIINGHADVNQLVPFKYQWAWDKYLAACANHWMPQEIQMS 90

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D+ALWK   GLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQY+LRQAF
Sbjct: 91  RDIALWKDPKGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQYMLRQAF 150

Query: 123 EEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRR 182
           EEA+H+H +QYI+ S+GLDEGE+FNMY EVPS+  K  + + +   L+ P F        
Sbjct: 151 EEAIHTHAYQYIVESIGLDEGEIFNMYHEVPSVRDKDQFLMPFIDVLADPHFKTGTLEND 210

Query: 183 SRILTRSLRFLC 194
            ++L   + F  
Sbjct: 211 QKLLRSLIVFAA 222


>gi|152980709|ref|YP_001354668.1| ribonucleotide-diphosphate reductase subunit beta
           [Janthinobacterium sp. Marseille]
 gi|151280786|gb|ABR89196.1| ribonucleoside-diphosphate reductase beta chain [Janthinobacterium
           sp. Marseille]
          Length = 392

 Score =  255 bits (652), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 101/182 (55%), Positives = 134/182 (73%)

Query: 13  GEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
             +R++  DKR++N ++DVNQL+P KY WAW+KYL+ C NHWMP E+ MQ D+ LWK+ N
Sbjct: 53  PTRRMDAADKRVINGQTDVNQLVPFKYKWAWDKYLAGCANHWMPQEINMQRDIELWKNPN 112

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
           GLTDDER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQYLLRQAFEEA+H+H +Q
Sbjct: 113 GLTDDERRLVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQ 172

Query: 133 YIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           YI+ SLGLDEGE+FN Y EV SI  K  + + + +TL+ P F         ++L   + F
Sbjct: 173 YIVESLGLDEGEIFNAYNEVESIRDKDQFLIPFIETLTDPEFKTGTTENDQKLLRSLIVF 232

Query: 193 LC 194
            C
Sbjct: 233 AC 234


>gi|121608466|ref|YP_996273.1| ribonucleotide-diphosphate reductase subunit beta
           [Verminephrobacter eiseniae EF01-2]
 gi|121553106|gb|ABM57255.1| Ribonucleoside-diphosphate reductase [Verminephrobacter eiseniae
           EF01-2]
          Length = 399

 Score =  255 bits (652), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 106/201 (52%), Positives = 141/201 (70%), Gaps = 9/201 (4%)

Query: 3   NNTGLSPIQAG---------EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNH 53
             TG++P  +G         ++RVN  DKR++N ++DVNQL+PLKY WAWEKYL++C NH
Sbjct: 41  PATGIAPASSGTRHQAPDAAQRRVNAADKRIINGQTDVNQLVPLKYKWAWEKYLASCANH 100

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           WMP EV M  D+ALWK+  GL+DDER +IKRNLGFF +++SL ANNIVL  YRH++ PEC
Sbjct: 101 WMPQEVNMTRDIALWKTPGGLSDDERRIIKRNLGFFVTADSLAANNIVLGTYRHITAPEC 160

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
           RQ+LLRQAFEEA+H+H +QYI+ SLGLDE E+FN Y EV SI  K  + + + + +  P 
Sbjct: 161 RQFLLRQAFEEAIHTHAYQYIVESLGLDESEIFNAYNEVRSIRDKDQFLIPFIEAIMDPH 220

Query: 174 FHYWNKRRRSRILTRSLRFLC 194
           FH  +      +L   + F C
Sbjct: 221 FHTGSAANDQTLLKSLIVFAC 241


>gi|293603286|ref|ZP_06685715.1| ribonucleotide-diphosphate reductase subunit beta subunit
           [Achromobacter piechaudii ATCC 43553]
 gi|292818321|gb|EFF77373.1| ribonucleotide-diphosphate reductase subunit beta subunit
           [Achromobacter piechaudii ATCC 43553]
          Length = 398

 Score =  255 bits (652), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 100/180 (55%), Positives = 131/180 (72%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           +RV V DKR++N  +DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALWK+ NGL
Sbjct: 61  QRVKVADKRIINGETDVNQLVPFKYKWAWEKYLATCANHWMPQEINMSRDIALWKNPNGL 120

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           T+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +QYI
Sbjct: 121 TEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYI 180

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + SL LDE E+FN Y EVPSI AK  + + +   ++ P+F          +L   + F C
Sbjct: 181 VESLDLDEAEIFNAYNEVPSIRAKDQFLIPFIDAIADPNFKTGTPEADQTLLKSLIVFAC 240


>gi|329902475|ref|ZP_08273120.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327548767|gb|EGF33404.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 416

 Score =  255 bits (652), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 102/187 (54%), Positives = 130/187 (69%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
            P     +R+N  DKR++N  +DVNQL+P KY WAW+KYL+ C NHWMP E+ MQ D+ L
Sbjct: 72  EPKADPARRMNAADKRIINGNTDVNQLVPFKYKWAWDKYLAGCANHWMPQEINMQRDIEL 131

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           WKS NGLTDDER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQYLLRQAFEEA+H
Sbjct: 132 WKSPNGLTDDERRLVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIH 191

Query: 128 SHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILT 187
           +H +QYI  SLGLDE E+FN Y EV SI  K  + + +   L+ P F         ++L 
Sbjct: 192 THAYQYITESLGLDEAEIFNAYHEVKSIRDKDEFLIPFIDALTDPLFTTGTTINDQKLLK 251

Query: 188 RSLRFLC 194
             + F C
Sbjct: 252 SLIVFSC 258


>gi|300784783|ref|YP_003765074.1| ribonucleoside-diphosphate reductase beta chain [Amycolatopsis
           mediterranei U32]
 gi|299794297|gb|ADJ44672.1| ribonucleoside-diphosphate reductase beta chain [Amycolatopsis
           mediterranei U32]
          Length = 357

 Score =  255 bits (651), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 132/192 (68%), Positives = 153/192 (79%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
            + TGL  I+ G  R+NVDDKRM+NAR+DVNQLLP+KY WAWEKYL+ CNNHWMPTEV M
Sbjct: 7   TDATGLGEIEVGAARINVDDKRMINARADVNQLLPMKYKWAWEKYLAGCNNHWMPTEVAM 66

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
           Q D+ALWKS +GLT+DER M+KRNLGFFA++ESLVANNIVLA+YR ++NPECRQYLLRQA
Sbjct: 67  QADIALWKSPDGLTEDERQMLKRNLGFFATAESLVANNIVLAVYRQITNPECRQYLLRQA 126

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRR 181
           FEEAVH+HTFQYI  SLGL EGELFNMYREVPSI+ K  WAL+YTQ L +P F       
Sbjct: 127 FEEAVHTHTFQYICESLGLVEGELFNMYREVPSISDKDAWALKYTQNLENPDFETGTPEA 186

Query: 182 RSRILTRSLRFL 193
               L   + F 
Sbjct: 187 DQAFLRDLVAFY 198


>gi|300309722|ref|YP_003773814.1| transmembrane ribonucleoside reductase small subunit
           [Herbaspirillum seropedicae SmR1]
 gi|300072507|gb|ADJ61906.1| transmembrane ribonucleoside reductase (small chain) protein
           [Herbaspirillum seropedicae SmR1]
          Length = 388

 Score =  255 bits (651), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 101/181 (55%), Positives = 131/181 (72%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
            +RVN  DKR++N  +DVNQL+P KY WAW+KYL+ C NHWMP E+ MQ D+ LWK+ NG
Sbjct: 50  TRRVNAADKRIINGHTDVNQLVPFKYKWAWDKYLAGCANHWMPQEINMQRDIELWKNPNG 109

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           LT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQYLLRQAFEEA+H+H +QY
Sbjct: 110 LTEDERRLVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQY 169

Query: 134 IITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           I+ SLGLDE E+FN Y EV SI  K  + + +  TL+ P F         ++L   + F 
Sbjct: 170 IVESLGLDEAEIFNAYHEVASIRDKDEFLIPFIDTLTDPEFKTGTMENDQKLLKSLIVFA 229

Query: 194 C 194
           C
Sbjct: 230 C 230


>gi|221065168|ref|ZP_03541273.1| Ribonucleoside-diphosphate reductase [Comamonas testosteroni KF-1]
 gi|220710191|gb|EED65559.1| Ribonucleoside-diphosphate reductase [Comamonas testosteroni KF-1]
          Length = 363

 Score =  255 bits (651), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 104/193 (53%), Positives = 135/193 (69%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           A +       +  KRVN  DKR++NA++DVNQL+P KY WAWEKYL+ C NHWMP EV M
Sbjct: 13  ATSAEAGASTSTHKRVNAADKRIINAKTDVNQLVPFKYKWAWEKYLATCANHWMPQEVNM 72

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQA
Sbjct: 73  TRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQA 132

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRR 181
           FEEA+H+H +QYI+ SLGLDE E+FN Y EV SI  K  + + + + +  P+FH      
Sbjct: 133 FEEAIHTHAYQYIVESLGLDESEIFNAYNEVQSIRDKDEFLIPFIEAIMDPNFHTGTPET 192

Query: 182 RSRILTRSLRFLC 194
              +L   + F C
Sbjct: 193 DQTLLKSLIVFAC 205


>gi|299533977|ref|ZP_07047329.1| ribonucleotide-diphosphate reductase subunit beta [Comamonas
           testosteroni S44]
 gi|298717886|gb|EFI58891.1| ribonucleotide-diphosphate reductase subunit beta [Comamonas
           testosteroni S44]
          Length = 363

 Score =  254 bits (650), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 104/193 (53%), Positives = 135/193 (69%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           A +       +  KRVN  DKR++NA++DVNQL+P KY WAWEKYL+ C NHWMP EV M
Sbjct: 13  ATSAEAGASTSTHKRVNAADKRIINAKTDVNQLVPFKYKWAWEKYLATCANHWMPQEVNM 72

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQA
Sbjct: 73  TRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQA 132

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRR 181
           FEEA+H+H +QYI+ SLGLDE E+FN Y EV SI  K  + + + + +  P+FH      
Sbjct: 133 FEEAIHTHAYQYIVESLGLDESEIFNAYNEVQSIRDKDEFLIPFIEAIMDPNFHTGTPET 192

Query: 182 RSRILTRSLRFLC 194
              +L   + F C
Sbjct: 193 DQTLLKSLIVFAC 205


>gi|311103857|ref|YP_003976710.1| ribonucleoside-diphosphate reductase subunit beta [Achromobacter
           xylosoxidans A8]
 gi|310758546|gb|ADP13995.1| ribonucleoside-diphosphate reductase subunit beta [Achromobacter
           xylosoxidans A8]
          Length = 399

 Score =  254 bits (650), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 100/180 (55%), Positives = 132/180 (73%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           +RV V DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP E+ M  D+ALWK+ NGL
Sbjct: 62  QRVKVADKRIINGQTDVNQLVPFKYKWAWEKYLATCANHWMPQEINMSRDIALWKNPNGL 121

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           T+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +QYI
Sbjct: 122 TEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYI 181

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + SL LDE E+FN Y EVPSI AK  + + +   ++ P+F          +L   + F C
Sbjct: 182 VESLDLDEAEIFNAYNEVPSIRAKDEFLIPFIDAIADPNFKTGTPEADQTLLKSLIVFAC 241


>gi|325983070|ref|YP_004295472.1| ribonucleoside-diphosphate reductase [Nitrosomonas sp. AL212]
 gi|325532589|gb|ADZ27310.1| Ribonucleoside-diphosphate reductase [Nitrosomonas sp. AL212]
          Length = 381

 Score =  254 bits (650), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 101/183 (55%), Positives = 135/183 (73%)

Query: 12  AGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSK 71
           +  +R+ V+DK+++N  +DVNQL+P KY WAW+KYL AC NHWMP E+ M  D+ALW+  
Sbjct: 41  SANRRIAVEDKQIINCNADVNQLVPFKYKWAWDKYLGACANHWMPQEISMSRDIALWRDP 100

Query: 72  NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
           NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++NPECRQYLLRQAFEEA+H+H +
Sbjct: 101 NGLTEDERRLVKRNLGFFVTADSLAANNIVLGTYRHITNPECRQYLLRQAFEEAIHTHAY 160

Query: 132 QYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           QYI+ SLGLDEGE+FN Y EV SI  K  + + +  TL++P F         ++L   + 
Sbjct: 161 QYIVESLGLDEGEIFNAYHEVSSIRDKDEFLIPFIDTLTNPHFKTGTLETDQQLLRSLIV 220

Query: 192 FLC 194
           F C
Sbjct: 221 FAC 223


>gi|120609557|ref|YP_969235.1| ribonucleotide-diphosphate reductase subunit beta [Acidovorax
           citrulli AAC00-1]
 gi|120588021|gb|ABM31461.1| Ribonucleoside-diphosphate reductase [Acidovorax citrulli AAC00-1]
          Length = 387

 Score =  254 bits (650), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 100/181 (55%), Positives = 129/181 (71%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
            +RVN  DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+ALWK  NG
Sbjct: 49  HRRVNAADKRIINGQTDVNQLVPFKYKWAWEKYLATCANHWMPQEVNMTRDIALWKDPNG 108

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           LT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +QY
Sbjct: 109 LTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQY 168

Query: 134 IITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           I+ SLGLDE E+FN Y EV SI  K  + + + + +  P F          +L   + F 
Sbjct: 169 IVESLGLDESEIFNAYNEVDSIRHKDEFLIPFIEAIMDPDFKTGTPETDQTLLKSLIVFA 228

Query: 194 C 194
           C
Sbjct: 229 C 229


>gi|313200886|ref|YP_004039544.1| ribonucleoside-diphosphate reductase [Methylovorus sp. MP688]
 gi|312440202|gb|ADQ84308.1| Ribonucleoside-diphosphate reductase [Methylovorus sp. MP688]
          Length = 381

 Score =  254 bits (650), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 98/183 (53%), Positives = 132/183 (72%)

Query: 12  AGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSK 71
           +   RV   DKR++N ++DVNQL+P KY WAW+KYL+ C NHWMP E+ M  D+A WK  
Sbjct: 41  SATGRVQAVDKRVINGQTDVNQLVPFKYHWAWDKYLAGCANHWMPQEISMSRDIAQWKDS 100

Query: 72  NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
           + LT+DERL++KRNLGFF +++SL ANNIVL  YRH++ PECRQYLLRQAFEEA+H+H +
Sbjct: 101 SALTEDERLIVKRNLGFFTTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAY 160

Query: 132 QYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           QYI+ SLGLDE E+FN Y+EV SI  K ++ + +  TL+ P F     +   ++L   + 
Sbjct: 161 QYIVESLGLDESEIFNAYQEVSSIRDKDDFLIPFINTLTDPEFKTGTTQADQQLLRSLIV 220

Query: 192 FLC 194
           F C
Sbjct: 221 FAC 223


>gi|302525965|ref|ZP_07278307.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. AA4]
 gi|302434860|gb|EFL06676.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. AA4]
          Length = 357

 Score =  254 bits (650), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 132/192 (68%), Positives = 154/192 (80%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
            + TGL  I+ G  R+NVDDKRM+NAR+DVNQLLP+KY WAW+KYL+ACNNHWMPTEV M
Sbjct: 7   TDATGLGEIEVGAARINVDDKRMINARADVNQLLPMKYRWAWDKYLAACNNHWMPTEVAM 66

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
           Q D+ALWKS +GLT+DER M+KRNLGFFA++ESLVANNIVLA+YR ++NPECRQYLLRQA
Sbjct: 67  QADIALWKSPDGLTEDERQMLKRNLGFFATAESLVANNIVLAVYRQITNPECRQYLLRQA 126

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRR 181
           FEEAVH+HTFQYI  SLGL EGELFNMYREVPSI+ K  WAL+YTQ L +P F       
Sbjct: 127 FEEAVHTHTFQYICESLGLVEGELFNMYREVPSISDKDAWALKYTQNLENPDFETGTPEA 186

Query: 182 RSRILTRSLRFL 193
               L   + F 
Sbjct: 187 DQAFLRDLVAFY 198


>gi|300022335|ref|YP_003754946.1| ribonucleoside-diphosphate reductase [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299524156|gb|ADJ22625.1| Ribonucleoside-diphosphate reductase [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 374

 Score =  254 bits (649), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 139/191 (72%), Positives = 154/191 (80%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           + TGL  I     RV VDDK M+NAR+DVNQLLPLKY WAWEKYL+ CNNHWMPTEV MQ
Sbjct: 25  DATGLGNIDRNGGRVRVDDKAMINARADVNQLLPLKYRWAWEKYLAGCNNHWMPTEVSMQ 84

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D+ALWKSK+GLT++ER MIKRNLGFFA+SESLVANNIVLAIYR+L+NPECRQYLLRQAF
Sbjct: 85  ADIALWKSKDGLTEEERRMIKRNLGFFAASESLVANNIVLAIYRNLTNPECRQYLLRQAF 144

Query: 123 EEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRR 182
           EEAVH+HTFQYI+ SLGLDEGELFNMYREVPSIT KA WAL YT+ L  PSF    K   
Sbjct: 145 EEAVHTHTFQYIVESLGLDEGELFNMYREVPSITDKAAWALAYTKHLDDPSFKTGTKETD 204

Query: 183 SRILTRSLRFL 193
              L   + F 
Sbjct: 205 QAFLRDLIAFY 215


>gi|160896947|ref|YP_001562529.1| ribonucleotide-diphosphate reductase subunit beta [Delftia
           acidovorans SPH-1]
 gi|160362531|gb|ABX34144.1| Ribonucleoside-diphosphate reductase [Delftia acidovorans SPH-1]
          Length = 363

 Score =  254 bits (649), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 105/187 (56%), Positives = 134/187 (71%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           +      KRVN  DKR++NA++DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+AL
Sbjct: 19  AAPSTTHKRVNAADKRIINAKTDVNQLVPFKYKWAWEKYLATCANHWMPQEVNMNRDIAL 78

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           WK  NGLT+DER +IKRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H
Sbjct: 79  WKDPNGLTEDERRIIKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIH 138

Query: 128 SHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILT 187
           +H +QYI+ SLGLDEGE+FN Y EVPSI  K  + + + + +  P+F          +L 
Sbjct: 139 THAYQYIVESLGLDEGEIFNAYLEVPSIRDKDEFLIPFIEAIMDPAFKTGTFETDQTLLK 198

Query: 188 RSLRFLC 194
             + F C
Sbjct: 199 SLIVFAC 205


>gi|315122301|ref|YP_004062790.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter solanacearum CLso-ZC1]
 gi|313495703|gb|ADR52302.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Liberibacter solanacearum CLso-ZC1]
          Length = 372

 Score =  254 bits (649), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 140/193 (72%), Positives = 160/193 (82%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +A+  GL PIQ G  R++ D+KRM+NARSDVNQLLPLKY WAWEKYL  CNNHWMPTEV 
Sbjct: 21  IADTVGLGPIQKGSARIHADEKRMINARSDVNQLLPLKYKWAWEKYLFGCNNHWMPTEVS 80

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           MQ D+ALW+SKNGLT+DER MIKRNLGFFA+SESLVANNIVLAIYRH+SNPECRQYLLRQ
Sbjct: 81  MQADIALWQSKNGLTNDERHMIKRNLGFFATSESLVANNIVLAIYRHISNPECRQYLLRQ 140

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AFEEAVH+HTFQYI+ SL L+EGELFNMYRE+PSIT KA+WAL+YT+ L+S SF      
Sbjct: 141 AFEEAVHTHTFQYIVESLSLNEGELFNMYREIPSITNKASWALRYTKNLNSTSFSTGTDD 200

Query: 181 RRSRILTRSLRFL 193
           R    L   + F 
Sbjct: 201 RDQDFLRDLIAFY 213


>gi|121595925|ref|YP_987821.1| ribonucleotide-diphosphate reductase subunit beta [Acidovorax sp.
           JS42]
 gi|222112113|ref|YP_002554377.1| ribonucleotide-diphosphate reductase subunit beta [Acidovorax
           ebreus TPSY]
 gi|120608005|gb|ABM43745.1| Ribonucleoside-diphosphate reductase [Acidovorax sp. JS42]
 gi|221731557|gb|ACM34377.1| Ribonucleoside-diphosphate reductase [Acidovorax ebreus TPSY]
          Length = 396

 Score =  254 bits (649), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 100/181 (55%), Positives = 130/181 (71%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
            +RV+  DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+ALWK  NG
Sbjct: 58  HRRVSAVDKRIINGQTDVNQLVPFKYKWAWEKYLATCANHWMPQEVNMTRDIALWKDPNG 117

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           LT+DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +QY
Sbjct: 118 LTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQY 177

Query: 134 IITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           I+ SLGLDEGE+FN Y EV SI  K  + + + + +  P F          +L   + F 
Sbjct: 178 IVESLGLDEGEIFNAYNEVQSIRDKDEFLIPFIEAIMDPRFTTGTPESDQTLLKSLIVFA 237

Query: 194 C 194
           C
Sbjct: 238 C 238


>gi|253998799|ref|YP_003050862.1| Ribonucleoside-diphosphate reductase [Methylovorus sp. SIP3-4]
 gi|253985478|gb|ACT50335.1| Ribonucleoside-diphosphate reductase [Methylovorus sp. SIP3-4]
          Length = 383

 Score =  253 bits (648), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 98/181 (54%), Positives = 131/181 (72%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
             RV   DKR++N ++DVNQL+P KY WAW+KYL+ C NHWMP E+ M  D+A WK  + 
Sbjct: 45  TGRVQAVDKRVINGQTDVNQLVPFKYHWAWDKYLAGCANHWMPQEISMSRDIAQWKDSSA 104

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           LT+DERL++KRNLGFF +++SL ANNIVL  YRH++ PECRQYLLRQAFEEA+H+H +QY
Sbjct: 105 LTEDERLIVKRNLGFFTTADSLAANNIVLGTYRHITAPECRQYLLRQAFEEAIHTHAYQY 164

Query: 134 IITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           I+ SLGLDE E+FN Y+EV SI  K ++ + +  TL+ P F     +   ++L   + F 
Sbjct: 165 IVESLGLDESEIFNAYQEVSSIRDKDDFLIPFINTLTDPEFKTGTTQADQQLLRSLIVFA 224

Query: 194 C 194
           C
Sbjct: 225 C 225


>gi|91787004|ref|YP_547956.1| ribonucleotide-diphosphate reductase subunit beta [Polaromonas sp.
           JS666]
 gi|91696229|gb|ABE43058.1| Ribonucleoside-diphosphate reductase [Polaromonas sp. JS666]
          Length = 406

 Score =  253 bits (647), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 100/179 (55%), Positives = 127/179 (70%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           RV   DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+ALWK  NGLT
Sbjct: 70  RVKASDKRIINGQTDVNQLVPFKYKWAWEKYLATCANHWMPQEVNMTRDIALWKDPNGLT 129

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           +DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +QYI 
Sbjct: 130 EDERRLVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYIT 189

Query: 136 TSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            SLGLDE E+FN Y EV SI  K  + + + + +S P F          +L   + F C
Sbjct: 190 ESLGLDEAEIFNAYNEVQSIKDKDQFLIPFIEVISDPHFKTGTTEADQTLLKSLIVFAC 248


>gi|119713586|gb|ABL97637.1| ribonucleotide-diphosphate reductase beta subunit [uncultured
           marine bacterium EB0_39H12]
          Length = 412

 Score =  252 bits (643), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 106/194 (54%), Positives = 140/194 (72%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +    G   ++    RV VDDK M+N R+D+NQL+P KY WAW+KYL    NHWMP EV 
Sbjct: 61  LDAKAGEEELEGLAGRVQVDDKAMINCRADLNQLVPFKYDWAWQKYLDGSANHWMPQEVN 120

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+ALWKS +GLT+DER ++ RNLGFF++++SLVANN+VLAIYR ++NPECRQY+LRQ
Sbjct: 121 MTADIALWKSNDGLTEDERTIVMRNLGFFSTADSLVANNLVLAIYRLITNPECRQYILRQ 180

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
            FEEA+H+H +QY I SLG+DEG +FNMYRE+PS+  KA+W L+YT+ +S P F      
Sbjct: 181 GFEEAIHTHAYQYCIESLGMDEGAIFNMYREIPSVAKKASWGLKYTKEISDPGFTTGTDE 240

Query: 181 RRSRILTRSLRFLC 194
               +L   + F C
Sbjct: 241 TDKLLLKNLIAFYC 254


>gi|302877617|ref|YP_003846181.1| Ribonucleoside-diphosphate reductase [Gallionella capsiferriformans
           ES-2]
 gi|302580406|gb|ADL54417.1| Ribonucleoside-diphosphate reductase [Gallionella capsiferriformans
           ES-2]
          Length = 365

 Score =  251 bits (642), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 107/179 (59%), Positives = 135/179 (75%), Gaps = 1/179 (0%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           R+ V+DKR++N ++DVNQL+P KY WAWEKYL+AC NHWMP EV M  D+ALWKS + L+
Sbjct: 30  RIRVEDKRIINCKADVNQLVPFKYKWAWEKYLAACANHWMPQEVNMTADIALWKS-DKLS 88

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           DDER +IKRNLGFF +++SL ANNIVL  YRH++NPECRQ+LLRQAFEEA+H+H +QYI+
Sbjct: 89  DDERRLIKRNLGFFTTADSLAANNIVLGSYRHITNPECRQFLLRQAFEEAIHTHAYQYIV 148

Query: 136 TSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            SLGLDEGE+FNMY EVPSI  K  + L Y   L++P F          +L   + F C
Sbjct: 149 ESLGLDEGEIFNMYHEVPSIRNKDEFLLPYIDVLTNPEFKTGTPEADQALLRSLIVFAC 207


>gi|134097869|ref|YP_001103530.1| ribonucleotide-diphosphate reductase subunit beta
           [Saccharopolyspora erythraea NRRL 2338]
 gi|291007412|ref|ZP_06565385.1| ribonucleotide-diphosphate reductase subunit beta
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133910492|emb|CAM00605.1| ribonucleoside-diphosphate reductase, beta subunit
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 360

 Score =  251 bits (641), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 130/190 (68%), Positives = 154/190 (81%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
           ++GL  I     RV+V +K M+N+R+DVNQLLPLKYGWAWEKYL+ CNNHWMPTEV MQ 
Sbjct: 12  SSGLGEIDRDGGRVDVAEKAMINSRADVNQLLPLKYGWAWEKYLAGCNNHWMPTEVSMQA 71

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+ALWKS++GLTDDER+M+KRNLGFFA++ESLVANNIVLA+YRH++NPECRQYLLRQAFE
Sbjct: 72  DIALWKSRDGLTDDERMMLKRNLGFFATAESLVANNIVLAVYRHITNPECRQYLLRQAFE 131

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           EAVH+HTFQYI  SLGLDEGELFNMYRE+PSI+ K  WAL+YTQ L +P F         
Sbjct: 132 EAVHTHTFQYICESLGLDEGELFNMYREIPSISDKDAWALRYTQNLENPDFEIGTPEADQ 191

Query: 184 RILTRSLRFL 193
             L   + F 
Sbjct: 192 AFLRDLVAFY 201


>gi|324998522|ref|ZP_08119634.1| ribonucleoside-diphosphate reductase beta chain [Pseudonocardia sp.
           P1]
          Length = 358

 Score =  251 bits (641), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 128/192 (66%), Positives = 152/192 (79%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
            + TGL  I  G   ++ DDKRM+NAR+DVNQLLPLKY WAW+KYL+ C+NHWMPTEV M
Sbjct: 8   PDTTGLGEIDRGAAPIDADDKRMINARADVNQLLPLKYHWAWDKYLAGCSNHWMPTEVAM 67

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
           Q D+ALW+S++GLTDDERLM+ RNLGFFA++ESLVANN+VLA+YRHL+NPECRQYLLRQ+
Sbjct: 68  QADIALWRSRDGLTDDERLMLTRNLGFFATAESLVANNVVLAVYRHLTNPECRQYLLRQS 127

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRR 181
           FEEAVH+HTFQY+  SLGLDEGELFN YR+VPSIT K  WAL+YTQ LS P F       
Sbjct: 128 FEEAVHTHTFQYVCESLGLDEGELFNAYRQVPSITDKDAWALRYTQALSDPDFCTGTPEN 187

Query: 182 RSRILTRSLRFL 193
               L   + F 
Sbjct: 188 DRAFLRDLVAFY 199


>gi|114321252|ref|YP_742935.1| ribonucleotide-diphosphate reductase subunit beta [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114227646|gb|ABI57445.1| Ribonucleoside-diphosphate reductase [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 354

 Score =  250 bits (640), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 137/191 (71%), Positives = 156/191 (81%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           N TGL  I+AG  RV+VD+KRM+N R+DVNQLLPLKY WAWEKYL+ CNNHWMPTEVPM 
Sbjct: 5   NATGLEAIEAGAHRVSVDEKRMINCRADVNQLLPLKYEWAWEKYLAGCNNHWMPTEVPMG 64

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D+ALW+  +GLT DERLMIKRNLGFFA+SESLVANNIVLAIYRH++NPECRQYLLRQAF
Sbjct: 65  ADIALWRHPDGLTADERLMIKRNLGFFATSESLVANNIVLAIYRHITNPECRQYLLRQAF 124

Query: 123 EEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRR 182
           EEA+H+HTFQYI+ SL LDEGELFNMYREVPSIT KA WAL+YTQ L S  F   ++   
Sbjct: 125 EEAIHTHTFQYIVESLDLDEGELFNMYREVPSITDKAAWALKYTQNLESGHFDTTSREGA 184

Query: 183 SRILTRSLRFL 193
              L   + F 
Sbjct: 185 QSFLRDLVAFY 195


>gi|90425007|ref|YP_533377.1| ribonucleotide-diphosphate reductase subunit beta [Rhodopseudomonas
           palustris BisB18]
 gi|90107021|gb|ABD89058.1| Ribonucleoside-diphosphate reductase [Rhodopseudomonas palustris
           BisB18]
          Length = 386

 Score =  250 bits (640), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 134/191 (70%), Positives = 153/191 (80%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           + TGL  I     RV++DDK M+N R+DVNQLLPLK+ WAWEKYL+ACNNHWMPTEV MQ
Sbjct: 37  DATGLGAIDRSGARVSIDDKAMINCRADVNQLLPLKHRWAWEKYLAACNNHWMPTEVSMQ 96

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D+ALW S++GLT+DER  IKRNLGFFA+SESLVANNIVLAIYRHL+NPECRQYLLRQAF
Sbjct: 97  ADIALWTSRDGLTEDERRAIKRNLGFFATSESLVANNIVLAIYRHLTNPECRQYLLRQAF 156

Query: 123 EEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRR 182
           EEAVH+HTFQYI+ SLGLDEGELFNMYREVPSIT KA WAL++TQ L  P+F        
Sbjct: 157 EEAVHTHTFQYIVESLGLDEGELFNMYREVPSITDKAAWALKHTQHLDDPTFATGTVEAD 216

Query: 183 SRILTRSLRFL 193
              L   + F 
Sbjct: 217 RAFLRDLVAFY 227


>gi|297563527|ref|YP_003682501.1| ribonucleoside-diphosphate reductase [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296847975|gb|ADH69995.1| Ribonucleoside-diphosphate reductase [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 360

 Score =  250 bits (639), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 136/192 (70%), Positives = 156/192 (81%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           +  +GL  I+   +RVNVDDK M+NAR+DVNQLLPLKY WAWEKYL+ CNNHWMPTEV M
Sbjct: 10  SATSGLGEIERDAERVNVDDKAMINARADVNQLLPLKYTWAWEKYLAGCNNHWMPTEVAM 69

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
           Q D+ALWKS++GLT+DERLM+KRNLGFFA++ESLVANNIVLA+YR L+NPECRQYLLRQA
Sbjct: 70  QADIALWKSRDGLTEDERLMLKRNLGFFATAESLVANNIVLAVYRQLTNPECRQYLLRQA 129

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRR 181
           FEEAVH+HTFQYI  SLGLDEGELFNMYREVPSITAK  WAL+YTQ L +P F       
Sbjct: 130 FEEAVHTHTFQYICESLGLDEGELFNMYREVPSITAKDAWALKYTQNLENPEFRTGTPEA 189

Query: 182 RSRILTRSLRFL 193
               L   + F 
Sbjct: 190 DQAFLRDLVAFY 201


>gi|264680215|ref|YP_003280125.1| ribonucleotide reductase [Comamonas testosteroni CNB-2]
 gi|262210731|gb|ACY34829.1| ribonucleotide reductase [Comamonas testosteroni CNB-2]
          Length = 336

 Score =  249 bits (637), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 100/178 (56%), Positives = 130/178 (73%)

Query: 17  VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           +N  DKR++NA++DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+ALWK  NGLT+
Sbjct: 1   MNAADKRIINAKTDVNQLVPFKYKWAWEKYLATCANHWMPQEVNMTRDIALWKDPNGLTE 60

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
           DER ++KRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H+H +QYI+ 
Sbjct: 61  DERRIVKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIHTHAYQYIVE 120

Query: 137 SLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           SLGLDE E+FN Y EV SI  K  + + + + +  P+FH         +L   + F C
Sbjct: 121 SLGLDESEIFNAYNEVQSIRDKDEFLIPFIEAIMDPNFHTGTPETDQTLLKSLIVFAC 178


>gi|330983931|gb|EGH82034.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. lachrymans str. M301315]
          Length = 388

 Score =  247 bits (632), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 103/184 (55%), Positives = 142/184 (77%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
           +  + RV V  K+M+NAR+DVNQL+P KY WAW+KYL  C+NHWMP EV M  D+ALWK 
Sbjct: 47  EGRQNRVQVGQKQMINARADVNQLVPFKYEWAWQKYLDGCSNHWMPQEVNMSADIALWKD 106

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            NGLTDDERL++KRNLG+F++++SLVANN+VLA+YR ++NPECRQY+LRQAFEEA+H+H 
Sbjct: 107 PNGLTDDERLILKRNLGYFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEAIHTHA 166

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSL 190
           +QY + SLGLD+GE+FNMY+EVPS+  KA W++++   ++ P+F        +  L   +
Sbjct: 167 YQYCVESLGLDDGEIFNMYQEVPSVARKAAWSIKHMDAITDPAFQTGTVEADTTFLKNLI 226

Query: 191 RFLC 194
            + C
Sbjct: 227 AYYC 230


>gi|257055668|ref|YP_003133500.1| ribonucleotide reductase, beta subunit [Saccharomonospora viridis
           DSM 43017]
 gi|256585540|gb|ACU96673.1| ribonucleotide reductase, beta subunit [Saccharomonospora viridis
           DSM 43017]
          Length = 349

 Score =  246 bits (629), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 130/184 (70%), Positives = 150/184 (81%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           +  G  RVNVDDK M+NAR+DVNQLLP+KYGWAWEKYL+ C+NHWMPTEV MQ D+ALWK
Sbjct: 7   LDFGAARVNVDDKAMINARADVNQLLPMKYGWAWEKYLAGCDNHWMPTEVSMQADIALWK 66

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
           S +GLTDDERLM+KRNLGFFA++ESLVANN+VLA+YRHL+NPECRQYLLRQAFEEAVH+H
Sbjct: 67  SPDGLTDDERLMLKRNLGFFATAESLVANNLVLAVYRHLTNPECRQYLLRQAFEEAVHTH 126

Query: 130 TFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRS 189
           TFQYI  SLGLDEGELFN YREVPSI  K +WAL+YT+ L  P+F           L   
Sbjct: 127 TFQYICVSLGLDEGELFNAYREVPSIANKDSWALRYTRNLEDPNFTTGTMEADQEFLRDL 186

Query: 190 LRFL 193
           + F 
Sbjct: 187 VAFY 190


>gi|294339031|emb|CAZ87378.1| putative Ribonucleoside-diphosphate reductase (ribonucleoside
           diphosphate reductase, beta subunit) [Thiomonas sp. 3As]
          Length = 410

 Score =  245 bits (625), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 104/187 (55%), Positives = 135/187 (72%), Gaps = 4/187 (2%)

Query: 12  AGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSK 71
           A   RV  +DKR++N   DVNQL+P KY WAW+KYL++C NHWMP EV M  D+A+WK  
Sbjct: 66  ASTARVRAEDKRIINCSVDVNQLVPFKYKWAWDKYLASCANHWMPQEVNMSRDIAMWKDP 125

Query: 72  NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
           NGLTDDERL+IKRNLGFF +++SL ANNIVL  YRH++NPECRQYLLRQAFEEA+H+H +
Sbjct: 126 NGLTDDERLIIKRNLGFFTTADSLAANNIVLGTYRHITNPECRQYLLRQAFEEAIHTHAY 185

Query: 132 QYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHY----WNKRRRSRILT 187
           QYI+ S+GLDE E+FN Y E+ SI  K  + + +  TL++P F       ++R    +L 
Sbjct: 186 QYIVESIGLDESEIFNSYHEITSIREKDEFLIPFIDTLTNPEFRTSAFGGSERNDQELLR 245

Query: 188 RSLRFLC 194
             + F C
Sbjct: 246 SIIVFAC 252


>gi|224825450|ref|ZP_03698555.1| Ribonucleoside-diphosphate reductase [Lutiella nitroferrum 2002]
 gi|224602371|gb|EEG08549.1| Ribonucleoside-diphosphate reductase [Lutiella nitroferrum 2002]
          Length = 360

 Score =  245 bits (625), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 96/182 (52%), Positives = 128/182 (70%), Gaps = 1/182 (0%)

Query: 13  GEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
           G  RVN  DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP EV MQ D+  WK+  
Sbjct: 22  GTGRVNASDKRVINGQTDVNQLVPFKYKWAWEKYLAQCANHWMPQEVNMQRDIEQWKT-G 80

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
            L++DE  ++KRNLGFF +++SL ANNIVL  YR ++ PECRQ+LLRQAF+EA+H+H +Q
Sbjct: 81  QLSEDEMRLVKRNLGFFVTADSLAANNIVLGTYRQITAPECRQFLLRQAFDEAIHTHAYQ 140

Query: 133 YIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           YI+ SLGLDEGE+FN Y E+ SI  K  + + +  TL +P F         ++L   + F
Sbjct: 141 YIVESLGLDEGEVFNAYHEIKSIRDKDEFLIPFIDTLCNPEFKTGTTETDQQLLKSLIVF 200

Query: 193 LC 194
            C
Sbjct: 201 AC 202


>gi|296135014|ref|YP_003642256.1| Ribonucleoside-diphosphate reductase [Thiomonas intermedia K12]
 gi|295795136|gb|ADG29926.1| Ribonucleoside-diphosphate reductase [Thiomonas intermedia K12]
          Length = 402

 Score =  244 bits (624), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 103/187 (55%), Positives = 135/187 (72%), Gaps = 4/187 (2%)

Query: 12  AGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSK 71
           A   RV  +DKR++N   DVNQL+P KY WAW+KYL++C NHWMP E+ M  D+A+WK  
Sbjct: 58  ASTARVRAEDKRIINCSVDVNQLVPFKYKWAWDKYLASCANHWMPQEINMSRDIAMWKDP 117

Query: 72  NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
           NGLTDDERL+IKRNLGFF +++SL ANNIVL  YRH++NPECRQYLLRQAFEEA+H+H +
Sbjct: 118 NGLTDDERLIIKRNLGFFTTADSLAANNIVLGTYRHITNPECRQYLLRQAFEEAIHTHAY 177

Query: 132 QYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHY----WNKRRRSRILT 187
           QYI+ S+GLDE E+FN Y E+ SI  K  + + +  TL++P F       ++R    +L 
Sbjct: 178 QYIVESIGLDESEIFNSYHEIASIRDKDEFLIPFIDTLTNPEFRTSAFGGSERNDQELLR 237

Query: 188 RSLRFLC 194
             + F C
Sbjct: 238 SIIVFAC 244


>gi|297265423|ref|XP_001091447.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Macaca
           mulatta]
          Length = 704

 Score =  244 bits (623), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 10/188 (5%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           +  +       V+D+ +L        + P++Y   W+ Y  A  + W   EV +  D+  
Sbjct: 401 AEPKTKAAAPGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQH 460

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           W+S   L  +ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +H
Sbjct: 461 WES---LKPEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIH 517

Query: 128 SHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           S  +  +I +   D  E   LFN    +P +  KA+WAL++     +     + +R  + 
Sbjct: 518 SEMYSLLIDTYIKDPKEREFLFNAIETMPCVKKKADWALRWIGDKEA----TYGERVVAF 573

Query: 185 ILTRSLRF 192
                + F
Sbjct: 574 AAVEGIFF 581


>gi|284032753|ref|YP_003382684.1| Ribonucleoside-diphosphate reductase [Kribbella flavida DSM 17836]
 gi|283812046|gb|ADB33885.1| Ribonucleoside-diphosphate reductase [Kribbella flavida DSM 17836]
          Length = 354

 Score =  243 bits (621), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 133/194 (68%), Positives = 151/194 (77%), Gaps = 4/194 (2%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
            T   PI  G  RV V DK M+NAR+DVNQLLPLKY WAW+KYL+ACNNHWMPTEV MQ 
Sbjct: 2   TTTTPPIAVGATRVEVADKAMINARADVNQLLPLKYQWAWDKYLAACNNHWMPTEVSMQA 61

Query: 64  DLALWKS----KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLR 119
           D+ALW+     K+GLT+DERLM+KRNLGFFA++ESLVANNIVLA+YR LSNPECRQYLLR
Sbjct: 62  DIALWRRPAGAKDGLTEDERLMLKRNLGFFATAESLVANNIVLAVYRQLSNPECRQYLLR 121

Query: 120 QAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNK 179
           QAFEEAVH+HTFQYI TSLGLDEGELFNMYREVPSI AK  WAL+YT+ L+   F     
Sbjct: 122 QAFEEAVHTHTFQYICTSLGLDEGELFNMYREVPSIAAKDAWALKYTRHLTDGDFRTGTP 181

Query: 180 RRRSRILTRSLRFL 193
              +  L   + F 
Sbjct: 182 EADTDFLRDLIAFY 195


>gi|34497739|ref|NP_901954.1| ribonucleotide-diphosphate reductase subunit beta [Chromobacterium
           violaceum ATCC 12472]
 gi|34103595|gb|AAQ59956.1| ribonucleoside-diphosphate reductase system [Chromobacterium
           violaceum ATCC 12472]
          Length = 360

 Score =  242 bits (618), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 99/194 (51%), Positives = 133/194 (68%), Gaps = 2/194 (1%)

Query: 2   ANNTGLSPIQA-GEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           A +   S + A G  RVNV DK+++N  +DVNQL+P K+ WAWEKYL+ C NHWMP EV 
Sbjct: 10  APSAAPSSMDAHGTGRVNVVDKKVINGTTDVNQLVPFKHKWAWEKYLAQCANHWMPQEVN 69

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           MQ D+  WK+   LT+DE  ++KRNLGFF +++SL ANNIVL  YR +++PECRQ+LLRQ
Sbjct: 70  MQRDIEQWKT-GQLTEDEMRIVKRNLGFFVTADSLAANNIVLGTYRQITSPECRQFLLRQ 128

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           AF+EA+H+H +QYI+ SLGLDEGE+FN Y EV SI  K  + + +   L +P F      
Sbjct: 129 AFDEAIHTHAYQYIVESLGLDEGEVFNAYHEVKSIRDKDEFLIPFIDVLCNPEFKTGTVE 188

Query: 181 RRSRILTRSLRFLC 194
              ++L   + F C
Sbjct: 189 NDQKLLKSLIVFAC 202


>gi|118500933|gb|ABK97635.1| ribonucleoside diphosphate reductase beta subunit [Allochromatium
           vinosum DSM 180]
          Length = 280

 Score =  240 bits (613), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 102/165 (61%), Positives = 132/165 (80%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
           +D+NQL+P KY WAW+KYL AC NHWMP E+ M  DLALWK  +GLT+DERL++KRNLGF
Sbjct: 1   ADLNQLVPFKYDWAWQKYLDACANHWMPQEISMNADLALWKDPHGLTEDERLIVKRNLGF 60

Query: 89  FASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNM 148
           F++++SLVANN+VLA+YRH++NPECRQYLLRQAFEEA+H+H +QY++ SLGLDEGE+FNM
Sbjct: 61  FSTADSLVANNLVLAVYRHITNPECRQYLLRQAFEEALHTHAYQYVVESLGLDEGEIFNM 120

Query: 149 YREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           YREVP++  KA WAL +TQ L+ P F         ++L   + F 
Sbjct: 121 YREVPAVARKAEWALPFTQHLADPHFQTGTPENDQKLLCELVAFY 165


>gi|189199548|ref|XP_001936111.1| ribonucleoside-diphosphate reductase subunit M2 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187983210|gb|EDU48698.1| ribonucleoside-diphosphate reductase subunit M2 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 410

 Score =  237 bits (604), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 55/196 (28%), Positives = 83/196 (42%), Gaps = 17/196 (8%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           A++  + P  A   +    D+ +L        L P+KY   W+ Y  A  + W   E+ +
Sbjct: 52  ADDEEVKPTVAPTIKPEEADEPLLQENPGRFVLFPIKYHDVWQMYKKAEASFWTAEEIDL 111

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             DL  W  +  L DDER  I   L FFA+S+ +V  N+V      +  PE R +   Q 
Sbjct: 112 SKDLHDWNKR--LNDDERFFISHVLAFFAASDGIVNENLVERFSSEVQIPEARCFYGFQI 169

Query: 122 FEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWN 178
             E VHS T+  +I +   D  +   LFN    +P I  KA+WAL++             
Sbjct: 170 MMENVHSETYSLLIDTYISDTRQRKYLFNAIENIPCIRKKADWALRWI------------ 217

Query: 179 KRRRSRILTRSLRFLC 194
             + S    R + F  
Sbjct: 218 SDKNSTFANRLVAFAA 233


>gi|260064013|ref|NP_001159403.1| ribonucleoside-diphosphate reductase subunit M2 isoform 1 [Homo
           sapiens]
          Length = 449

 Score =  237 bits (604), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 10/188 (5%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           +  +       V+D+ +L        + P++Y   W+ Y  A  + W   EV +  D+  
Sbjct: 116 TEPKTKAAAPGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQH 175

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           W+S   L  +ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +H
Sbjct: 176 WES---LKPEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIH 232

Query: 128 SHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           S  +  +I +   D  E   LFN    +P +  KA+WAL++     +     + +R  + 
Sbjct: 233 SEMYSLLIDTYIKDPKEREFLFNAIETMPCVKKKADWALRWIGDKEA----TYGERVVAF 288

Query: 185 ILTRSLRF 192
                + F
Sbjct: 289 AAVEGIFF 296


>gi|119621373|gb|EAX00968.1| hCG23833, isoform CRA_b [Homo sapiens]
 gi|119621374|gb|EAX00969.1| hCG23833, isoform CRA_b [Homo sapiens]
          Length = 449

 Score =  237 bits (604), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 10/188 (5%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           +  +       V+D+ +L        + P++Y   W+ Y  A  + W   EV +  D+  
Sbjct: 116 TEPKTKAAAPGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQH 175

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           W+S   L  +ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +H
Sbjct: 176 WES---LKPEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIH 232

Query: 128 SHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           S  +  +I +   D  E   LFN    +P +  KA+WAL++     +     + +R  + 
Sbjct: 233 SEMYSLLIDTYIKDPKEREFLFNAIETMPCVKKKADWALRWIGDKEA----TYGERVVAF 288

Query: 185 ILTRSLRF 192
                + F
Sbjct: 289 AAVEGIFF 296


>gi|297668213|ref|XP_002812343.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Pongo abelii]
          Length = 449

 Score =  235 bits (601), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 46/188 (24%), Positives = 82/188 (43%), Gaps = 10/188 (5%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           +  +      +V+D+ +L        + P++Y   W+ Y  A  + W   EV +  D+  
Sbjct: 116 AEPKTKAAAPDVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQH 175

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           W+S   L  +ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +H
Sbjct: 176 WES---LKPEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIH 232

Query: 128 SHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           S  +  +I +   D  E   LFN    +P +  KA+WAL++     +     + +R  + 
Sbjct: 233 SEMYSLLIDTYIKDPKEREFLFNAIETLPCVKKKADWALRWIGDKEA----TYGERVVAF 288

Query: 185 ILTRSLRF 192
                + F
Sbjct: 289 AAVEGIFF 296


>gi|330921941|ref|XP_003299625.1| hypothetical protein PTT_10664 [Pyrenophora teres f. teres 0-1]
 gi|311326599|gb|EFQ92269.1| hypothetical protein PTT_10664 [Pyrenophora teres f. teres 0-1]
          Length = 410

 Score =  235 bits (600), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 54/196 (27%), Positives = 82/196 (41%), Gaps = 17/196 (8%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           A+   + P  A   +    D+ +L        L P+KY   W+ Y  A  + W   E+ +
Sbjct: 52  ADAEEVKPTVAPTIKPEEADEPLLQENPGRFVLFPIKYHDVWQMYKKAEASFWTAEEIDL 111

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             DL  W  +  L DDER  I   L FFA+S+ +V  N+V      +  PE R +   Q 
Sbjct: 112 SKDLHDWNKR--LNDDERFFISHVLAFFAASDGIVNENLVERFSSEVQIPEARCFYGFQI 169

Query: 122 FEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWN 178
             E VHS T+  +I +   +  +   LFN    +P I  KA+WAL++             
Sbjct: 170 MMENVHSETYSLLIDTYISEPRQRKYLFNAIDNIPCIRKKADWALRWI------------ 217

Query: 179 KRRRSRILTRSLRFLC 194
             + S    R + F  
Sbjct: 218 SDKNSTFANRLVAFAA 233


>gi|261855609|ref|YP_003262892.1| ribonucleoside-diphosphate reductase [Halothiobacillus neapolitanus
           c2]
 gi|261836078|gb|ACX95845.1| Ribonucleoside-diphosphate reductase [Halothiobacillus neapolitanus
           c2]
          Length = 398

 Score =  235 bits (599), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 126/191 (65%), Positives = 148/191 (77%), Gaps = 1/191 (0%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
            TGL  I  G  RV+V  KR++NA +DVNQLLP+KY WAWEKYL+ CNNHWMPTEV MQ 
Sbjct: 50  QTGLEGIAQGAGRVDVSAKRIINATADVNQLLPMKYTWAWEKYLAGCNNHWMPTEVSMQA 109

Query: 64  DLALWKSKNG-LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
           D+ALWK ++G LT DER MI RNLGFFA++ESLVANNIVLAIY+ ++NPECRQYLLRQAF
Sbjct: 110 DIALWKGRDGGLTADERAMIMRNLGFFATAESLVANNIVLAIYKQVTNPECRQYLLRQAF 169

Query: 123 EEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRR 182
           EEAVH+HTFQYI+ SLGL EGELFNMYRE+PSITAK  WAL+YT+ L+   F     +  
Sbjct: 170 EEAVHTHTFQYIVESLGLAEGELFNMYREIPSITAKDEWALKYTKNLADGDFDTSTTKGA 229

Query: 183 SRILTRSLRFL 193
              L   + F 
Sbjct: 230 QDFLRDLVAFY 240


>gi|225561749|gb|EEH10029.1| ribonucleotide reductase M2 B [Ajellomyces capsulatus G186AR]
 gi|240275354|gb|EER38868.1| ribonucleoside-diphosphate reductase subunit small [Ajellomyces
           capsulatus H143]
 gi|325091193|gb|EGC44503.1| ribonucleoside-diphosphate reductase subunit small [Ajellomyces
           capsulatus H88]
          Length = 413

 Score =  232 bits (592), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 22/201 (10%)

Query: 2   ANNTGLSPIQAGEKRVN-----VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMP 56
              +   P +  +K +        D+ +L    +   L PLKY   W+ Y  A  + W  
Sbjct: 54  TETSARKPEEGEKKALTGVKALEADEPLLQENPNRFVLFPLKYHEIWQMYKKAEASFWTA 113

Query: 57  TEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQY 116
            E+ +  DL  W   N L DDER  I   L FFA+S+ +V  N+V      +  PE R +
Sbjct: 114 EEIDLSKDLHDWN--NRLNDDERYFISHVLAFFAASDGIVNENLVERFSGEVQVPEARCF 171

Query: 117 LLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPS 173
              Q   E +HS T+  +I +   +  +   LF+    +P I  KA+WA+++ +      
Sbjct: 172 YGFQIMMENIHSETYSLLIDTYIKEPKQRTYLFDAIETIPCIRKKADWAIRWIE------ 225

Query: 174 FHYWNKRRRSRILTRSLRFLC 194
                  + S    R + F  
Sbjct: 226 ------DKDSTFAQRLVAFAA 240


>gi|126303832|ref|XP_001381111.1| PREDICTED: similar to hCG23833, [Monodelphis domestica]
          Length = 493

 Score =  231 bits (589), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 43/193 (22%), Positives = 80/193 (41%), Gaps = 10/193 (5%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
               ++         + +D+ +L        + P++Y   W  Y  A  + W   EV + 
Sbjct: 155 PTEPVTKAPNEPASPSKEDEPLLRENPRRFVIFPIEYHDIWHMYKKAEASFWTAEEVDLS 214

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D+  W++   L  +E+  I   L FFA+S+ +V  N+V    + +   E R +   Q  
Sbjct: 215 KDIQHWET---LKSEEKYFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIA 271

Query: 123 EEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNK 179
            E +HS  +  +I +   D  E   LFN    +P +  KA+WAL++       +   + +
Sbjct: 272 MENIHSEMYSLLIDTYIKDPKEREFLFNAIETLPCVKKKADWALRWI----GDNEATYGE 327

Query: 180 RRRSRILTRSLRF 192
           R  +      + F
Sbjct: 328 RVVAFAAVEGIFF 340


>gi|225684487|gb|EEH22771.1| ribonucleoside-diphosphate reductase small chain A
           [Paracoccidioides brasiliensis Pb03]
          Length = 413

 Score =  230 bits (588), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 53/201 (26%), Positives = 87/201 (43%), Gaps = 22/201 (10%)

Query: 2   ANNTGLSPIQAGEK-----RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMP 56
           ++ T + P++  +K     +    D+ +L        L PLKY   W+ Y  A  + W  
Sbjct: 54  SDATPVKPVEQEKKIGSTAKDLEADEPLLQENPHRFVLFPLKYHEIWQMYKKAEASFWTA 113

Query: 57  TEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQY 116
            E+ +  DL  W   N L DDER  I   L FFA+S+ +V  N+V      +  PE R +
Sbjct: 114 EEIDLSKDLHDWN--NRLNDDERYFISHVLAFFAASDGIVNENLVERFSGEVQVPEARCF 171

Query: 117 LLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPS 173
              Q   E +HS T+  +I +   +  +   LF+    +P I  KA+WA+++ +      
Sbjct: 172 YGFQIMMENIHSETYSLLIDTYIKEPKQRTYLFDAIDTIPCIRKKADWAIRWIE------ 225

Query: 174 FHYWNKRRRSRILTRSLRFLC 194
                  + S    R + F  
Sbjct: 226 ------DKESTFAQRLVAFAA 240


>gi|312216546|emb|CBX96496.1| similar to ribonucleoside-diphosphate reductase subunit M2
           [Leptosphaeria maculans]
          Length = 410

 Score =  230 bits (588), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 53/190 (27%), Positives = 78/190 (41%), Gaps = 17/190 (8%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
            P  A   R     + +L        L P+KY   W+ Y  A  + W   E+ +  DL  
Sbjct: 57  KPSTAPTIRPEEAHEPLLQENPQRFVLFPIKYHDVWQMYKKAEASFWTAEEIDLSKDLHD 116

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           W  +  L DDER  I   L FFA+S+ +V  N+V      +  PE R +   Q   E VH
Sbjct: 117 WNKR--LNDDERFFISHVLAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENVH 174

Query: 128 SHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           S T+  +I +   +  +   LFN    +P I  KA+WAL++               + S 
Sbjct: 175 SETYSLLIDTYISEPRQRKYLFNAIDNIPCIRKKADWALRWI------------SDKNST 222

Query: 185 ILTRSLRFLC 194
              R + F  
Sbjct: 223 FANRLVAFAA 232


>gi|156058956|ref|XP_001595401.1| hypothetical protein SS1G_03490 [Sclerotinia sclerotiorum 1980]
 gi|154701277|gb|EDO01016.1| hypothetical protein SS1G_03490 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 407

 Score =  230 bits (587), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 51/182 (28%), Positives = 80/182 (43%), Gaps = 17/182 (9%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           +    D+ +L    +   L P+KY   W+ Y  A  + W   E+ +  DL  W   N L 
Sbjct: 65  KPEEADEPLLQENPNRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWN--NRLN 122

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           DDER  I   L FFA+S+ +V  N+V      +  PE R +   Q   E +HS T+  +I
Sbjct: 123 DDERYFISHVLAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLI 182

Query: 136 TSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
            +   ++ +   LFN    +P I  KA+WA+++ Q             + S    R + F
Sbjct: 183 DTYIKEQAQKTYLFNAIDTIPCIKKKADWAVKWIQ------------DKNSTFAQRLVAF 230

Query: 193 LC 194
             
Sbjct: 231 AA 232


>gi|145249942|ref|XP_001401310.1| ribonucleoside-diphosphate reductase small chain [Aspergillus niger
           CBS 513.88]
 gi|134081995|emb|CAK46680.1| unnamed protein product [Aspergillus niger]
          Length = 396

 Score =  230 bits (586), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 21/200 (10%)

Query: 2   ANNTGLSPIQAGEKRVNVDD----KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPT 57
           A+     P++A +    + +    + +L        L P+KY   W+ Y  A  + W   
Sbjct: 44  ADKPVEKPVEAPKVAPGIKEMEASEPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAE 103

Query: 58  EVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYL 117
           E+ +  DL  W   N L DDER  I   L FFA+S+ +V  N+V      +  PE R + 
Sbjct: 104 EIDLSKDLHDWH--NRLNDDERYFISHVLAFFAASDGIVNENLVERFSGEVQVPEARCFY 161

Query: 118 LRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSF 174
             Q   E +HS T+  +I +   +  +   LF+    +P I  KA+WA+++ Q       
Sbjct: 162 GFQIMMENIHSETYSLLIDTYIKEPKQRTYLFDAIDTIPCIAKKADWAIKWIQ------- 214

Query: 175 HYWNKRRRSRILTRSLRFLC 194
                 R S    R + F  
Sbjct: 215 -----DRESTFAQRLVAFAA 229


>gi|4557845|ref|NP_001025.1| ribonucleoside-diphosphate reductase subunit M2 isoform 2 [Homo
           sapiens]
 gi|400979|sp|P31350|RIR2_HUMAN RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|36155|emb|CAA42181.1| small subunit ribonucleotide reductase [Homo sapiens]
 gi|251637|gb|AAA09577.1| ribonucleotide reductase R2 subunit [Homo sapiens]
 gi|12804875|gb|AAH01886.1| Ribonucleotide reductase M2 polypeptide [Homo sapiens]
 gi|14029165|gb|AAK51163.1| ribonucleotide reductase M2 subunit [Homo sapiens]
 gi|20988810|gb|AAH30154.1| Ribonucleotide reductase M2 polypeptide [Homo sapiens]
 gi|62702173|gb|AAX93099.1| unknown [Homo sapiens]
 gi|123981920|gb|ABM82789.1| ribonucleotide reductase M2 polypeptide [synthetic construct]
 gi|123996753|gb|ABM85978.1| ribonucleotide reductase M2 polypeptide [synthetic construct]
 gi|189053955|dbj|BAG36462.1| unnamed protein product [Homo sapiens]
 gi|261861600|dbj|BAI47322.1| ribonucleotide reductase M2 [synthetic construct]
          Length = 389

 Score =  230 bits (586), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 10/188 (5%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           +  +       V+D+ +L        + P++Y   W+ Y  A  + W   EV +  D+  
Sbjct: 56  TEPKTKAAAPGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQH 115

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           W+S   L  +ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +H
Sbjct: 116 WES---LKPEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIH 172

Query: 128 SHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           S  +  +I +   D  E   LFN    +P +  KA+WAL++     +     + +R  + 
Sbjct: 173 SEMYSLLIDTYIKDPKEREFLFNAIETMPCVKKKADWALRWIGDKEA----TYGERVVAF 228

Query: 185 ILTRSLRF 192
                + F
Sbjct: 229 AAVEGIFF 236


>gi|154283275|ref|XP_001542433.1| hypothetical protein HCAG_02604 [Ajellomyces capsulatus NAm1]
 gi|150410613|gb|EDN06001.1| hypothetical protein HCAG_02604 [Ajellomyces capsulatus NAm1]
          Length = 255

 Score =  230 bits (586), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 22/201 (10%)

Query: 2   ANNTGLSPIQAGEKRVN-----VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMP 56
              +   P +  +K +        D+ +L    +   L PLKY   W+ Y  A  + W  
Sbjct: 54  TETSARKPEEGEKKALTGVKALEADEPLLQENPNRFVLFPLKYHEIWQMYKKAEASFWTA 113

Query: 57  TEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQY 116
            E+ +  DL  W   N L DDER  I   L FFA+S+ +V  N+V      +  PE R +
Sbjct: 114 EEIDLSKDLHDWN--NRLNDDERYFISHVLAFFAASDGIVNENLVERFSGEVQVPEARCF 171

Query: 117 LLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPS 173
              Q   E +HS T+  +I +   +  +   LF+    +P I  KA+WA+++ +      
Sbjct: 172 YGFQIMMENIHSETYSLLIDTYIKEPKQRTYLFDAIETIPCIRKKADWAIRWIE------ 225

Query: 174 FHYWNKRRRSRILTRSLRFLC 194
                  + S    R + F  
Sbjct: 226 ------DKDSTFAQRLVAFAA 240


>gi|2500209|sp|Q60561|RIR2_MESAU RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|49650|emb|CAA48232.1| ribonucleotide reductase [Mesocricetus auratus]
          Length = 386

 Score =  229 bits (585), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 47/188 (25%), Positives = 80/188 (42%), Gaps = 10/188 (5%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
            P        +V+D+ +L        + P++Y   W+ Y  A  + W   EV +  D+  
Sbjct: 57  EPESKVSTNPSVEDEPLLRENPRRFVVFPIEYHDIWKMYKKAEASFWTAEEVDLSKDIQH 116

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           W+    L  DER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +H
Sbjct: 117 WE---ALKPDERHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIH 173

Query: 128 SHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           S  +  +I +   D  E   LFN    +P +  KA+WAL++     +     + +R  + 
Sbjct: 174 SEMYSLLIDTYIKDSKEREYLFNAIETMPCVKKKADWALRWIGDKEA----TYGERVVAF 229

Query: 185 ILTRSLRF 192
                + F
Sbjct: 230 AAVEGIFF 237


>gi|261189551|ref|XP_002621186.1| ribonucleotide reductase small subunit RnrA [Ajellomyces
           dermatitidis SLH14081]
 gi|239591422|gb|EEQ74003.1| ribonucleotide reductase small subunit RnrA [Ajellomyces
           dermatitidis SLH14081]
 gi|239613047|gb|EEQ90034.1| ribonucleotide reductase small subunit RnrA [Ajellomyces
           dermatitidis ER-3]
 gi|327356917|gb|EGE85774.1| ribonucleotide reductase M2 B [Ajellomyces dermatitidis ATCC 18188]
          Length = 413

 Score =  229 bits (585), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 22/200 (11%)

Query: 3   NNTGLSPIQAGEKRVN-----VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPT 57
             T L P +  +K +        ++ +L    +   L PLKY   W+ Y  A  + W   
Sbjct: 55  ETTPLRPEETEKKALTGMKALEAEEPLLQENPNRFVLFPLKYHEIWQMYKKAEASFWTAE 114

Query: 58  EVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYL 117
           E+ +  DL  W   N L DDER  I   L FFA+S+ +V  N+V      +  PE R + 
Sbjct: 115 EIDLSKDLHDWN--NRLNDDERYFISHVLAFFAASDGIVNENLVERFSSEVQVPEARCFY 172

Query: 118 LRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSF 174
             Q   E +HS T+  +I +   +  +   LF+    +P I  KA+WA+++ +       
Sbjct: 173 GFQIMMENIHSETYSLLIDTYIKEPKQRTYLFDAIDTIPCIRKKADWAIRWIE------- 225

Query: 175 HYWNKRRRSRILTRSLRFLC 194
                 + S    R + F  
Sbjct: 226 -----DKESSFAQRLVAFAA 240


>gi|148705043|gb|EDL36990.1| ribonucleotide reductase M2 [Mus musculus]
          Length = 411

 Score =  229 bits (584), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 10/185 (5%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
                  +V+D+ +L        + P++Y   W+ Y  A  + W   EV +  D+  W+ 
Sbjct: 81  SKAPTNPSVEDEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWE- 139

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              L  DER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  
Sbjct: 140 --ALKPDERHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEM 197

Query: 131 FQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILT 187
           +  +I +   D  E   LFN    +P +  KA+WAL++     +     + +R  +    
Sbjct: 198 YSLLIDTYIKDPKEREYLFNAIETMPCVKKKADWALRWIGDKEA----TYGERVVAFAAV 253

Query: 188 RSLRF 192
             + F
Sbjct: 254 EGIFF 258


>gi|7106399|ref|NP_033130.1| ribonucleoside-diphosphate reductase subunit M2 [Mus musculus]
 gi|132626|sp|P11157|RIR2_MOUSE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|22218698|pdb|1H0N|A Chain A, Cobalt Substitution Of Mouse R2 Ribonucleotide Reductase
           To Model The Reactive Diferrous State
 gi|22218699|pdb|1H0O|A Chain A, Cobalt Substitution Of Mouse R2 Ribonucleotide Reductase
           To Model The Reactive Diferrous State
 gi|52696260|pdb|1W68|A Chain A, Crystal Structure Of Mouse Ribonucleotide Reductase
           Subunit R2 Under Oxidizing Conditions. A Fully Occupied
           Dinuclear Iron Cluster.
 gi|52696261|pdb|1W69|A Chain A, Crystal Structure Of Mouse Ribonucleotide Reductase
           Subunit R2 Under Reducing Conditions. A Fully Occupied
           Dinuclear Iron Cluster And Bound Acetate.
 gi|157834262|pdb|1XSM|A Chain A, Protein R2 Of Ribonucleotide Reductase From Mouse
 gi|50720|emb|CAA33707.1| M2 ribonucleotide reductase [Mus musculus]
 gi|200768|gb|AAA40062.1| ribonucleotide reductase subunit M2 [Mus musculus]
 gi|26354034|dbj|BAC40647.1| unnamed protein product [Mus musculus]
 gi|54887418|gb|AAH85136.1| Ribonucleotide reductase M2 [Mus musculus]
 gi|74139292|dbj|BAE40793.1| unnamed protein product [Mus musculus]
 gi|74151119|dbj|BAE27683.1| unnamed protein product [Mus musculus]
 gi|74179887|dbj|BAE36508.1| unnamed protein product [Mus musculus]
 gi|74188932|dbj|BAE39238.1| unnamed protein product [Mus musculus]
 gi|74189151|dbj|BAE39331.1| unnamed protein product [Mus musculus]
 gi|74206394|dbj|BAE24918.1| unnamed protein product [Mus musculus]
 gi|74211991|dbj|BAE40165.1| unnamed protein product [Mus musculus]
          Length = 390

 Score =  228 bits (582), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 10/185 (5%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
                  +V+D+ +L        + P++Y   W+ Y  A  + W   EV +  D+  W+ 
Sbjct: 60  SKAPTNPSVEDEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWE- 118

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              L  DER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  
Sbjct: 119 --ALKPDERHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEM 176

Query: 131 FQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILT 187
           +  +I +   D  E   LFN    +P +  KA+WAL++     +     + +R  +    
Sbjct: 177 YSLLIDTYIKDPKEREYLFNAIETMPCVKKKADWALRWIGDKEA----TYGERVVAFAAV 232

Query: 188 RSLRF 192
             + F
Sbjct: 233 EGIFF 237


>gi|154296564|ref|XP_001548712.1| ribonucleotide reductase small subunit [Botryotinia fuckeliana
           B05.10]
 gi|150843273|gb|EDN18466.1| ribonucleotide reductase small subunit [Botryotinia fuckeliana
           B05.10]
          Length = 407

 Score =  228 bits (582), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 50/182 (27%), Positives = 80/182 (43%), Gaps = 17/182 (9%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           +    D+ +L    +   L P+KY   W+ Y  A  + W   E+ +  DL  W  +  L 
Sbjct: 65  KPEEADEPLLQENPNRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNER--LN 122

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           DDER  I   L FFA+S+ +V  N+V      +  PE R +   Q   E +HS T+  +I
Sbjct: 123 DDERYFISHVLAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLI 182

Query: 136 TSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
            +   ++ +   LFN    +P I  KA+WA+++ Q             + S    R + F
Sbjct: 183 DTYIKEQSQKTYLFNAIDTIPCIKKKADWAVKWIQ------------DKNSTFAQRLVAF 230

Query: 193 LC 194
             
Sbjct: 231 AA 232


>gi|149728153|ref|XP_001502384.1| PREDICTED: similar to Ribonucleoside-diphosphate reductase subunit
           M2 (Ribonucleotide reductase small subunit)
           (Ribonucleotide reductase small chain) [Equus caballus]
          Length = 425

 Score =  228 bits (582), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 10/181 (5%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
              +V+D+ +L        + P++Y   W+ Y  A  + W   EV +  D+  W+    L
Sbjct: 99  PAPSVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWE---AL 155

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
             +ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +
Sbjct: 156 KPEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLL 215

Query: 135 ITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           I +   D  E   LFN    +P +  KA+WAL++     +     + +R  +      + 
Sbjct: 216 IDTYIKDSKEREFLFNAIETMPCVKKKADWALRWIGDKEA----TYGERVVAFAAVEGIF 271

Query: 192 F 192
           F
Sbjct: 272 F 272


>gi|303314521|ref|XP_003067269.1| ribonucleoside-diphosphate reductase small chain, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|240106937|gb|EER25124.1| ribonucleoside-diphosphate reductase small chain, putative
           [Coccidioides posadasii C735 delta SOWgp]
 gi|320037571|gb|EFW19508.1| ribonucleoside-diphosphate reductase small subunit [Coccidioides
           posadasii str. Silveira]
          Length = 408

 Score =  228 bits (581), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 51/197 (25%), Positives = 84/197 (42%), Gaps = 17/197 (8%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +  +   +P ++   +    ++ +L        L PLKY   W+ Y  A  + W   E+ 
Sbjct: 56  VKPSAPEAPKKSLTPKELEAEEPLLQENPHRFVLFPLKYHEIWQMYKKAEASFWTAEEID 115

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           +  DL  W  +  L DDER  I R L FFA+S+ +V  N+V      +  PE R +   Q
Sbjct: 116 LSKDLHDWNHR--LNDDERYFISRVLAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQ 173

Query: 121 AFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYW 177
              E +HS T+  +I +   +  +   LF+    +P I  KA+WA+++ Q   S      
Sbjct: 174 IMMENIHSETYSLLIDTYIKEPKQRTYLFDAIDTIPCIRKKADWAIRWIQDQES------ 227

Query: 178 NKRRRSRILTRSLRFLC 194
                     R + F  
Sbjct: 228 ------TFAQRLIAFAA 238


>gi|302665732|ref|XP_003024474.1| hypothetical protein TRV_01368 [Trichophyton verrucosum HKI 0517]
 gi|291188529|gb|EFE43863.1| hypothetical protein TRV_01368 [Trichophyton verrucosum HKI 0517]
          Length = 529

 Score =  228 bits (581), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 49/196 (25%), Positives = 81/196 (41%), Gaps = 20/196 (10%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           A    + P      +    ++ +L        L P+KY   W+ Y  A  + W   E+ +
Sbjct: 181 AETQVVKP---KTPKELEAEEPLLQENPQRFVLFPIKYREIWQMYKKAEASFWTAEEIDL 237

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D+  W   N L DDER  I   L FFA+S+ +V  N++      +  PE R +   Q 
Sbjct: 238 SKDIHDWN--NRLNDDERFFISHVLAFFAASDGIVNENLLERFSNEVQVPEARCFYGFQI 295

Query: 122 FEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWN 178
             E +HS T+  +I +   ++ +   LF     +P I  KA+WA+++ Q           
Sbjct: 296 MMENIHSETYSLLIDTYIKEQKQRTYLFEAIDTIPCIRKKADWAIRWIQ----------- 344

Query: 179 KRRRSRILTRSLRFLC 194
             + S    R + F  
Sbjct: 345 -DKDSTFAQRLVAFAA 359


>gi|258567064|ref|XP_002584276.1| ribonucleoside-diphosphate reductase small chain [Uncinocarpus
           reesii 1704]
 gi|237905722|gb|EEP80123.1| ribonucleoside-diphosphate reductase small chain [Uncinocarpus
           reesii 1704]
          Length = 401

 Score =  228 bits (581), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 17/197 (8%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +  +    P +A   +    ++ +L        L PLKY   W+ Y  A  + W   E+ 
Sbjct: 49  IKPSAPEEPKKALSPKELEAEEPLLQENPQRFVLFPLKYHEIWQMYKKAEASFWTAEEID 108

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           +  DL  W  +  L DDER  I R L FFA+S+ +V  N+V      +  PE R +   Q
Sbjct: 109 LSKDLHDWNHR--LNDDERYFISRVLAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQ 166

Query: 121 AFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYW 177
              E +HS T+  +I +   +  +   LF     +P I  KA+WA+++ Q          
Sbjct: 167 IMMENIHSETYSLLIDTYIKEPKQRTYLFEALDNIPCIRKKADWAIRWIQ---------- 216

Query: 178 NKRRRSRILTRSLRFLC 194
              + S    R + F  
Sbjct: 217 --DKDSTFAQRLIAFAA 231


>gi|301772278|ref|XP_002921557.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Ailuropoda melanoleuca]
          Length = 393

 Score =  228 bits (581), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 12/190 (6%)

Query: 8   SPIQAGEKRV--NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
            P Q   K +  +V+D+ +L        + P++Y   W+ Y  A  + W   EV +  D+
Sbjct: 58  EPTQQETKVLAPSVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDI 117

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             W+S   L  +ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E 
Sbjct: 118 QHWES---LKPEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMEN 174

Query: 126 VHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRR 182
           +HS  +  +I +   D  E   LFN    +P +  KA+WAL++     +     + +R  
Sbjct: 175 IHSEMYSLLIDTYIKDSKEREFLFNAIETMPCVKKKADWALRWIGDKEA----TYGERVV 230

Query: 183 SRILTRSLRF 192
           +      + F
Sbjct: 231 AFAAVEGIFF 240


>gi|75076796|sp|Q4R7Q7|RIR2_MACFA RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|67969020|dbj|BAE00865.1| unnamed protein product [Macaca fascicularis]
          Length = 389

 Score =  227 bits (580), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 10/188 (5%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           +  +       V+D+ +L        + P++Y   W+ Y  A  + W   EV +  D+  
Sbjct: 56  AEPKTKAAAPGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQH 115

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           W+S   L  +ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +H
Sbjct: 116 WES---LKPEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIH 172

Query: 128 SHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           S  +  +I +   D  E   LFN    +P +  KA+WAL++     +     + +R  + 
Sbjct: 173 SEMYSLLIDTYIKDPKEREFLFNAIETMPCVEKKADWALRWIGDKEA----TYGERVVAF 228

Query: 185 ILTRSLRF 192
                + F
Sbjct: 229 AAVEGIFF 236


>gi|171687074|ref|XP_001908478.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943498|emb|CAP69151.1| unnamed protein product [Podospora anserina S mat+]
          Length = 409

 Score =  227 bits (579), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 17/191 (8%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           +  + A E +  + D+ +L        L P+KY   W+ Y  A  + W   E+ +  DL 
Sbjct: 61  IKTVAAPEPKQELLDEPLLTENPQRFVLFPIKYHEVWQMYKKAEASFWTAEEIDLSKDLH 120

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            W   N L DDE+  I   L FFA+S+ +V  N+V      +  PE R +   Q   E +
Sbjct: 121 DW--SNKLNDDEKFFISHILAFFAASDGIVNENLVERFSAEVQIPEARCFYGFQIMMENI 178

Query: 127 HSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           HS T+  +I +   +  +   LFN    +P I  KA+WAL++               + +
Sbjct: 179 HSETYSLLIDTYIKEPSQRTYLFNAIDTIPCIRKKADWALRWI------------SDKDA 226

Query: 184 RILTRSLRFLC 194
               R + F  
Sbjct: 227 SFAQRLVAFAA 237


>gi|50545856|ref|XP_500466.1| YALI0B03630p [Yarrowia lipolytica]
 gi|49646332|emb|CAG82692.1| YALI0B03630p [Yarrowia lipolytica]
          Length = 403

 Score =  227 bits (579), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 9/180 (5%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           R +  D+ +L        L P++Y   W+ Y  A  + W   E+ +  D+  W+  N L 
Sbjct: 71  RESEKDEPLLKENHRRFVLFPIQYHEIWQMYKKAEASFWTAEEIDLGKDMGDWE--NRLN 128

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           +DER  I   L FFA+S+ +V  N+V      +  PE + +   Q   E +HS T+  +I
Sbjct: 129 NDERFFISHVLAFFAASDGIVNENLVERFSGEVQAPEAKCFYGFQIMMENIHSETYSLLI 188

Query: 136 TSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
            +   D  E   LFN    +P I  KA+WAL++     S     + +R  +      + F
Sbjct: 189 DTYIKDPKERTYLFNAIETIPCIKKKADWALKWISDEES----TFGERLIAFAAVEGIFF 244


>gi|47213107|emb|CAF89527.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 369

 Score =  227 bits (579), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 6/149 (4%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L        + P++Y   W+ Y  A  + W   EV +  DL  W+S   L DDER 
Sbjct: 1   EEPLLKENPRRFVIFPIQYQDLWQMYKKAEASFWTAEEVDLSKDLQHWES---LKDDERF 57

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +I +   
Sbjct: 58  FISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIK 117

Query: 141 DEGE---LFNMYREVPSITAKANWALQYT 166
           +  E   LFN    +P +  KA+WAL + 
Sbjct: 118 EPSEREYLFNAIETLPCVKKKADWALNWI 146


>gi|119174781|ref|XP_001239725.1| hypothetical protein CIMG_09346 [Coccidioides immitis RS]
          Length = 408

 Score =  227 bits (579), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 17/189 (8%)

Query: 9   PIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           P ++   +    ++ +L        L PLKY   W+ Y  A  + W   E+ +  DL  W
Sbjct: 64  PKKSLTPKELEAEEPLLQENPHRFVLFPLKYHEIWQMYKKAEASFWTAEEIDLSKDLHDW 123

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
             +  L DDER  I R L FFA+S+ +V  N+V      +  PE R +   Q   E +HS
Sbjct: 124 NHR--LNDDERYFISRVLAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHS 181

Query: 129 HTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
            T+  +I +   +  +   LF+    +P I  KA+WA+++ Q   S              
Sbjct: 182 ETYSLLIDTYIKEPKQRTYLFDAIDTIPCIRKKADWAIRWIQDQES------------TF 229

Query: 186 LTRSLRFLC 194
             R + F  
Sbjct: 230 AQRLIAFAA 238


>gi|302904131|ref|XP_003049009.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256729943|gb|EEU43296.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 389

 Score =  227 bits (578), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 51/188 (27%), Positives = 81/188 (43%), Gaps = 17/188 (9%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           ++A  +     D+ +L        L P+KY   W+ Y  A  + W   E+ +  DL  W 
Sbjct: 45  LKAKWEEAEEADEPLLQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWN 104

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
             N LT DE+  I   L FFA+S+ +V  N+V      +  PE R +   Q   E +HS 
Sbjct: 105 --NRLTSDEQFFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSE 162

Query: 130 TFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRIL 186
           T+  +I +   +  +   LFN    +P I  KA+WA+++ Q             + S   
Sbjct: 163 TYSLLIDTYIKEPSQRTYLFNAIETIPCIRKKADWAIRWIQ------------DKDSSFA 210

Query: 187 TRSLRFLC 194
            R + F  
Sbjct: 211 QRLVAFAA 218


>gi|159465835|ref|XP_001691128.1| ribonucleoside-diphosphate reductase small chain [Chlamydomonas
           reinhardtii]
 gi|158279814|gb|EDP05574.1| ribonucleoside-diphosphate reductase small chain [Chlamydomonas
           reinhardtii]
          Length = 394

 Score =  227 bits (578), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 19/183 (10%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
            R  + ++ +L+   D   + P+KY   WE Y  A  + W   EV + DD+  W+    L
Sbjct: 67  PRKRMLEEPLLDENPDRFCMFPIKYPQIWEMYKKAEASFWTAEEVDLGDDMKHWEK---L 123

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           +D ER  I   L FFA+S+ +V  N+ +   + +  PE R +   Q   E +HS  +  +
Sbjct: 124 SDGERHFISHVLAFFAASDGIVLENLAIRFMKEVQLPEARAFYGFQVAIENIHSEMYSLL 183

Query: 135 ITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           + S   D  E   LF+    VP I  KA WA+++  +              S    R + 
Sbjct: 184 LESYIKDPQEKHKLFHSIETVPCIKKKAQWAMKWIGS-------------DSVFSERLVA 230

Query: 192 FLC 194
           F  
Sbjct: 231 FAA 233


>gi|46122063|ref|XP_385585.1| hypothetical protein FG05409.1 [Gibberella zeae PH-1]
          Length = 399

 Score =  227 bits (578), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 17/179 (9%)

Query: 19  VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
            +D+ +L        L P+KY   W+ Y  A  + W   E+ +  DL  W   N LT DE
Sbjct: 64  EEDEPILQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWN--NRLTSDE 121

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           +  I   L FFA+S+ +V  N+V      +  PE R +   Q   E +HS T+  +I + 
Sbjct: 122 QYFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTY 181

Query: 139 GLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             D  +   LFN    +P I  KA+WA+++ Q             + S    R + F  
Sbjct: 182 IKDPAQRTYLFNAVDTIPCIRKKADWAIRWIQ------------DKNSTFAQRLVAFAA 228


>gi|212533263|ref|XP_002146788.1| ribonucleotide reductase small subunit RnrA, putative [Penicillium
           marneffei ATCC 18224]
 gi|210072152|gb|EEA26241.1| ribonucleotide reductase small subunit RnrA, putative [Penicillium
           marneffei ATCC 18224]
          Length = 406

 Score =  227 bits (578), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 51/195 (26%), Positives = 80/195 (41%), Gaps = 17/195 (8%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
                +P  A   +    ++ +L        L P+KY   W+ Y  A  + W   E+ + 
Sbjct: 54  PTVQATPKVAPSIKEMEANEPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLS 113

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            DL  W   N L DDER  I   L FFA+S+ +V  N+V      +  PE R +   Q  
Sbjct: 114 KDLHDWN--NRLNDDERYFISHVLAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIM 171

Query: 123 EEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNK 179
            E +HS T+  +I +   +  +   LF+    +P I  KA+WAL++              
Sbjct: 172 MENIHSETYSLLIDTYINEPKQRTYLFDAIDNIPCIRKKADWALRWI------------S 219

Query: 180 RRRSRILTRSLRFLC 194
            + S    R + F  
Sbjct: 220 DKESTFAQRLVAFAA 234


>gi|325181522|emb|CCA15972.1| ribonucleosidediphosphate reductase small chain put [Albugo
           laibachii Nc14]
          Length = 1611

 Score =  227 bits (578), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 45/195 (23%), Positives = 84/195 (43%), Gaps = 10/195 (5%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           ++++  ++P +  E    +  +  L    +   L P++    W+ Y  A  + W   E+ 
Sbjct: 49  LSDSNSITPFKEKEMNGQLLPEPFLRENPNRFVLFPIQQSEIWDMYKKAEASFWTAEEID 108

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           +  D+  W     ++D+ER  IK  L FFA+S+ +V  N+ +     +  PE R +   Q
Sbjct: 109 LVHDMNDW---LNISDNERHFIKHVLAFFAASDGIVNENLAMNFSSEVQIPEARCFYGFQ 165

Query: 121 AFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYW 177
              E +HS  +  +I +   D  E   L      +P +T KA WAL++      P    +
Sbjct: 166 IAIENIHSEVYSLLIDTYIKDPTEKQHLLCAIETIPCVTNKAQWALKWC----DPKCASF 221

Query: 178 NKRRRSRILTRSLRF 192
            +R  +      + F
Sbjct: 222 AERVVAFAAVEGIFF 236


>gi|71043760|ref|NP_001020911.1| ribonucleoside-diphosphate reductase subunit M2 [Rattus norvegicus]
 gi|77416595|sp|Q4KLN6|RIR2_RAT RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|68533806|gb|AAH99082.1| Ribonucleotide reductase M2 [Rattus norvegicus]
 gi|149051013|gb|EDM03186.1| rCG61374 [Rattus norvegicus]
          Length = 390

 Score =  226 bits (577), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 44/185 (23%), Positives = 80/185 (43%), Gaps = 10/185 (5%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
                + +++++ +L        + P++Y   W+ Y  A  + W   EV +  D+  W+ 
Sbjct: 60  SKAPTKPSIEEEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWE- 118

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              L  DER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  
Sbjct: 119 --ALKPDERHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEM 176

Query: 131 FQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILT 187
           +  +I +   D  E   LFN    +P +  KA+WAL++     +     + +R  +    
Sbjct: 177 YSLLIDTYIKDSKEREYLFNAIETMPCVKKKADWALRWIGDKEA----TYGERVVAFAAV 232

Query: 188 RSLRF 192
             + F
Sbjct: 233 EGIFF 237


>gi|262263187|dbj|BAI48096.1| ribonucleotide reductase M2 [Sus scrofa]
          Length = 355

 Score =  226 bits (577), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 10/178 (5%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           +V+D+ +L        + P++Y   W+ Y  A  + W   EV +  D+  W++   L  +
Sbjct: 49  SVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWET---LKPE 105

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +I +
Sbjct: 106 ERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDT 165

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
              D  E   LFN    +P +  KA+WAL++     +     + +R  +      + F
Sbjct: 166 YIKDSKEREFLFNAIETMPCVKKKADWALRWIGDKEA----TYGERVVAFAAVEGIFF 219


>gi|289620013|emb|CBI53457.1| unnamed protein product [Sordaria macrospora]
          Length = 410

 Score =  226 bits (577), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 17/186 (9%)

Query: 12  AGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSK 71
           A   +     + +L        L P+KY   W+ Y  A  + W   E+ +  DL  W   
Sbjct: 67  APTLKPEEAAEPLLTENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWN-- 124

Query: 72  NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
           N LTDDER  +   L FFA+S+ +V  N+V      +  PE R +   Q   E +HS T+
Sbjct: 125 NRLTDDERFFVSHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETY 184

Query: 132 QYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
             +I +   +  +   LFN    +P I  KA+WAL++               + S    R
Sbjct: 185 SLLIDTYIKEPSQRTYLFNAIDTIPCIRKKADWALRWI------------TDKSSTFAQR 232

Query: 189 SLRFLC 194
            + F  
Sbjct: 233 LVAFAA 238


>gi|293343290|ref|XP_002725449.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like [Rattus
           norvegicus]
 gi|293355176|ref|XP_002728627.1| PREDICTED: ribonucleotide reductase M2 polypeptide [Rattus
           norvegicus]
          Length = 390

 Score =  226 bits (577), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 44/185 (23%), Positives = 80/185 (43%), Gaps = 10/185 (5%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
                + +++++ +L        + P++Y   W+ Y  A  + W   EV +  D+  W+ 
Sbjct: 60  SKAPTKPSIEEEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWE- 118

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              L  DER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  
Sbjct: 119 --ALKPDERHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEM 176

Query: 131 FQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILT 187
           +  +I +   D  E   LFN    +P +  KA+WAL++     +     + +R  +    
Sbjct: 177 YSLLIDTYIKDSKEREYLFNAIETMPCVKKKADWALRWIGDKEA----TYGERVVAFAAV 232

Query: 188 RSLRF 192
             + F
Sbjct: 233 EGIFF 237


>gi|74207686|dbj|BAE40088.1| unnamed protein product [Mus musculus]
          Length = 390

 Score =  226 bits (576), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 10/185 (5%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
                  +V+D+ +L        + P++Y   W+ Y  A  + W   EV +  D+  W+ 
Sbjct: 60  SKAPTNPSVEDEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWE- 118

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              L  DER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  
Sbjct: 119 --ALKPDERHFISHALAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEM 176

Query: 131 FQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILT 187
           +  +I +   D  E   LFN    +P +  KA+WAL++     +     + +R  +    
Sbjct: 177 YSLLIDTYIKDPKEREYLFNAIETMPCVKKKADWALRWIGDKEA----TYGERVMAFAAV 232

Query: 188 RSLRF 192
             + F
Sbjct: 233 EGIFF 237


>gi|322709430|gb|EFZ01006.1| ribonucleoside-diphosphate reductase M2 subunit [Metarhizium
           anisopliae ARSEF 23]
          Length = 414

 Score =  226 bits (576), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 52/190 (27%), Positives = 80/190 (42%), Gaps = 17/190 (8%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           S   A   +    D+ +L        L P+KY   W+ Y  A  + W   E+ +  DL  
Sbjct: 67  SAAVAPGIKAEEVDEPLLQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHD 126

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           W   N L DDE+  I   L FFA+S+ +V  N+V      +  PE R +   Q   E +H
Sbjct: 127 WN--NRLNDDEKYFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIH 184

Query: 128 SHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           S T+  +I +   +  +   LFN    +P I  KA+WA+++ Q             + S 
Sbjct: 185 SETYSLLIDTYIKENAQRTYLFNAIDTIPCIRKKADWAIRWIQ------------DKEST 232

Query: 185 ILTRSLRFLC 194
              R + F  
Sbjct: 233 FAQRLVAFAA 242


>gi|302843870|ref|XP_002953476.1| hypothetical protein VOLCADRAFT_109884 [Volvox carteri f.
           nagariensis]
 gi|300261235|gb|EFJ45449.1| hypothetical protein VOLCADRAFT_109884 [Volvox carteri f.
           nagariensis]
          Length = 400

 Score =  226 bits (576), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 11/187 (5%)

Query: 9   PIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
            +    ++   D + +L+   D   + P+KY   WE Y  A  + W   EV + DD+  W
Sbjct: 67  ELFTSPRKSMRDPEPLLDENPDRFCMFPIKYPKIWEMYKKAEASFWTAEEVDLGDDMKHW 126

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           +    L+D ER  I   L FFA+S+ +V  N+ +   + +  PE R +   Q   E +HS
Sbjct: 127 EK---LSDGERHFISHVLAFFAASDGIVLENLAIRFMKEVQLPEARAFYGFQVAIENIHS 183

Query: 129 HTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
             +  ++ +   D  E   LF+    VP I  KA WA+++  + SS     + +R  +  
Sbjct: 184 EMYSLLLETYIKDPIEKHKLFHSIETVPCIKKKAQWAIKWIGSESS-----FPERLVAFA 238

Query: 186 LTRSLRF 192
               + F
Sbjct: 239 AVEGIFF 245


>gi|289177074|ref|NP_001165948.1| ribonucleoside-diphosphate reductase subunit M2 B isoform 2 [Homo
           sapiens]
          Length = 423

 Score =  226 bits (576), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 51/193 (26%), Positives = 83/193 (43%), Gaps = 10/193 (5%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
              G S     E  +  +++ +L   S    + P++Y   W+ Y  A  + W   EV + 
Sbjct: 85  PQAGRSSSDTNESEIKSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLS 144

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            DL  W   N L  DE+  I   L FFA+S+ +V  N+V    + +  PE R +   Q  
Sbjct: 145 KDLPHW---NKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQIL 201

Query: 123 EEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNK 179
            E VHS  +  +I +   D  +   LFN    +P +  KA+WAL++     S     + +
Sbjct: 202 IENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKS----TFGE 257

Query: 180 RRRSRILTRSLRF 192
           R  +      + F
Sbjct: 258 RVVAFAAVEGVFF 270


>gi|73979721|ref|XP_540076.2| PREDICTED: similar to Ribonucleoside-diphosphate reductase M2 chain
           (Ribonucleotide reductase small chain) isoform 1 [Canis
           familiaris]
          Length = 394

 Score =  226 bits (576), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 12/190 (6%)

Query: 8   SPIQAGEKRV--NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
            P +   K +  + +++ +L        + P++Y   W+ Y  A  + W   EV +  D+
Sbjct: 59  EPAEPKTKVLAPSAEEEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDI 118

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             W+S   L  +ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E 
Sbjct: 119 QHWES---LKPEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMEN 175

Query: 126 VHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRR 182
           +HS  +  +I +   D  E   LFN    +P +  KA+WAL++     +     + +R  
Sbjct: 176 IHSEMYSLLIDTYIKDSKEREFLFNAIETMPCVKKKADWALRWIGDKEA----TYGERVV 231

Query: 183 SRILTRSLRF 192
           +      + F
Sbjct: 232 AFAAVEGIFF 241


>gi|320585888|gb|EFW98567.1| ribonucleotide reductase small subunit [Grosmannia clavigera
           kw1407]
          Length = 378

 Score =  226 bits (576), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 58/195 (29%), Positives = 85/195 (43%), Gaps = 22/195 (11%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           NNT +S I+A E      ++ +L   +    L P+KY   W+ Y     + W   E+ + 
Sbjct: 47  NNTAVSAIKAAEA-----EEPLLKENAQRFVLFPIKYHEIWQMYKKHEASFWTAEEIDLS 101

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            DL  W   N L DDER  +   L FFA+S+ +V  N+V      +  PE R +   Q  
Sbjct: 102 KDLHDWN--NRLNDDERFFVSHILAFFAASDGIVNENLVERFSAEVQVPEARCFYGFQIM 159

Query: 123 EEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNK 179
            E VHS T+  +I +   D  +   LFN    +P I  KA+WAL++              
Sbjct: 160 MENVHSETYSLLIDTYIKDTAQRTHLFNAIDTIPCIRKKADWALKWI------------S 207

Query: 180 RRRSRILTRSLRFLC 194
            R S    R + F  
Sbjct: 208 DRESTFAQRLVAFAA 222


>gi|315041979|ref|XP_003170366.1| ribonucleoside-diphosphate reductase small subunit [Arthroderma
           gypseum CBS 118893]
 gi|311345400|gb|EFR04603.1| ribonucleoside-diphosphate reductase small subunit [Arthroderma
           gypseum CBS 118893]
          Length = 408

 Score =  225 bits (575), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 49/196 (25%), Positives = 83/196 (42%), Gaps = 17/196 (8%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           +  T    ++A   +    ++ +L        L P+KY   W+ Y  A  + W   E+ +
Sbjct: 57  SKPTEAQVVKAKTPKELEAEEPLLQENPQRFVLFPIKYREIWQMYKKAEASFWTAEEIDL 116

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D+  W   N L DDER  I   L FFA+S+ +V  N++      +  PE R +   Q 
Sbjct: 117 SKDIHDWN--NRLNDDERFFISHVLAFFAASDGIVNENLLERFSNEVQVPEARCFYGFQI 174

Query: 122 FEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWN 178
             E +HS T+  +I +   ++ +   LF     +P I  KA+WA+++ Q           
Sbjct: 175 MMENIHSETYSLLIDTYIKEQKQRTYLFEAIDTIPCIRKKADWAIRWIQ----------- 223

Query: 179 KRRRSRILTRSLRFLC 194
             + S    R + F  
Sbjct: 224 -DKDSTFAQRLVAFAA 238


>gi|148230557|ref|NP_001080772.1| ribonucleotide reductase M2 polypeptide [Xenopus laevis]
 gi|28839018|gb|AAH47975.1| Rrm2-prov protein [Xenopus laevis]
          Length = 386

 Score =  225 bits (575), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 10/188 (5%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           +P     K     D+ +L        + P++Y   W+ Y  A  + W   EV +  D+  
Sbjct: 53  TPTSKVPKNPRFTDEPLLKDNPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDIQH 112

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           W+S   L  DER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +H
Sbjct: 113 WES---LKTDERYFISHVLAFFAASDGIVNENLVERFSKEVQVTEARCFYGFQIAMENIH 169

Query: 128 SHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           S  +  +I +   D  E   LFN    +P +  KA+WAL++     S     + +R  + 
Sbjct: 170 SEMYSLLIDTYIKDPKERGFLFNAIETLPCVKKKADWALRWI----SDKQATYGERVVAF 225

Query: 185 ILTRSLRF 192
                + F
Sbjct: 226 AAVEGIFF 233


>gi|296421312|ref|XP_002840209.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295636423|emb|CAZ84400.1| unnamed protein product [Tuber melanosporum]
          Length = 397

 Score =  225 bits (575), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 52/190 (27%), Positives = 82/190 (43%), Gaps = 18/190 (9%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
            P +   K   + D+ +L        L P+KY   W+ Y  A  + W+  E+ +  D+  
Sbjct: 54  KPSEEDTKSEEM-DEPILTENKHRFVLFPIKYHEIWQMYKKAEASFWVAEEIDLSKDMHD 112

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           W  +  L DDER  I   L FFA+S+ +V  N+V      +  PE R +   Q   E VH
Sbjct: 113 WSDR--LNDDERYFISHVLAFFAASDGIVNENLVQRFSNEVQIPEARCFYGFQIMMENVH 170

Query: 128 SHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           S T+  +I +   D  +   LF+    +P I  KA+WA+++ +             R S 
Sbjct: 171 SETYSLLIDTYIKDPKQRTYLFDAIDTIPCIKKKADWAIRWIE------------DRNST 218

Query: 185 ILTRSLRFLC 194
              R + F  
Sbjct: 219 FAQRLVAFAA 228


>gi|149408710|ref|XP_001506085.1| PREDICTED: similar to 5,10-methenyltetrahydrofolate synthetase
           [Ornithorhynchus anatinus]
          Length = 394

 Score =  225 bits (575), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 10/178 (5%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
            V+D+ +L        + P++Y   W+ Y  A  + W   EV +  D+  W+S   L  +
Sbjct: 71  RVEDEPLLKENPRRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDIQHWES---LKPE 127

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +I +
Sbjct: 128 EKYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDT 187

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
              +  E   LFN    +P +  KA+WAL++     +     + +R  +      + F
Sbjct: 188 YIKEPKEREFLFNAIETLPCVKKKADWALRWIGDKEA----TYGERVVAFAAVEGIFF 241


>gi|321476700|gb|EFX87660.1| hypothetical protein DAPPUDRAFT_306462 [Daphnia pulex]
          Length = 378

 Score =  225 bits (574), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 14/197 (7%)

Query: 3   NNTGLSPIQAGEKRVNVDD----KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTE 58
            N   + +   EK V V D    + +L +      L P++Y   W+ Y  A  + W   E
Sbjct: 34  ENVSPTKLTTVEKSVQVRDNDQNEPLLRSNPSRFVLFPIQYHDIWQMYKKAEASFWTAEE 93

Query: 59  VPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLL 118
           V +  DL  W   + L  +ER  +   L FFA+S+ +V  N+V    + +  PE R +  
Sbjct: 94  VDLSKDLKDW---DNLQPNERHFVSHVLAFFAASDGIVNENLVERFAQEVQVPEARCFYG 150

Query: 119 RQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFH 175
            Q   E +HS  +  +I +   D  E   LFN    +P I  KA WA+++     +P   
Sbjct: 151 FQIAMENIHSEMYSLLIETYIKDSAERTRLFNAVETMPCIAKKAEWAMKWIGNKDAP--- 207

Query: 176 YWNKRRRSRILTRSLRF 192
            +++R  +      + F
Sbjct: 208 -YSERIVAFAAVEGIFF 223


>gi|255536887|ref|XP_002509510.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
           communis]
 gi|223549409|gb|EEF50897.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
           communis]
          Length = 329

 Score =  225 bits (574), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 49/177 (27%), Positives = 75/177 (42%), Gaps = 19/177 (10%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L    D   + P++Y   WE Y  A  + W   EV +  DL  W+S   LT DE+ 
Sbjct: 6   EEPLLAPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDLRHWES---LTPDEKH 62

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I   L FFA+S+ +V  N+     + +   E R +   Q   E +HS  +  ++ +   
Sbjct: 63  FISHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           D  E   LF+    VP I  KA WAL++     S                R + F C
Sbjct: 123 DSNEKNRLFHAIETVPCIAKKAEWALKWIDGSES-------------FAERIIAFAC 166


>gi|73979723|ref|XP_856346.1| PREDICTED: similar to Ribonucleoside-diphosphate reductase M2 chain
           (Ribonucleotide reductase small chain) isoform 3 [Canis
           familiaris]
          Length = 381

 Score =  225 bits (574), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 12/190 (6%)

Query: 8   SPIQAGEKRV--NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
            P +   K +  + +++ +L        + P++Y   W+ Y  A  + W   EV +  D+
Sbjct: 59  EPAEPKTKVLAPSAEEEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDI 118

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             W+S   L  +ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E 
Sbjct: 119 QHWES---LKPEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMEN 175

Query: 126 VHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRR 182
           +HS  +  +I +   D  E   LFN    +P +  KA+WAL++     +     + +R  
Sbjct: 176 IHSEMYSLLIDTYIKDSKEREFLFNAIETMPCVKKKADWALRWIGDKEA----TYGERVV 231

Query: 183 SRILTRSLRF 192
           +      + F
Sbjct: 232 AFAAVEGIFF 241


>gi|322693757|gb|EFY85606.1| ribonucleoside-diphosphate reductase M2 subunit [Metarhizium
           acridum CQMa 102]
          Length = 411

 Score =  225 bits (574), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 50/182 (27%), Positives = 78/182 (42%), Gaps = 17/182 (9%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           +    D+ +L        L P+KY   W+ Y  A  + W   E+ +  DL  W   N L 
Sbjct: 72  KAEEADEPLLQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWN--NRLN 129

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           DDE+  I   L FFA+S+ +V  N+V      +  PE R +   Q   E +HS T+  +I
Sbjct: 130 DDEKYFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLI 189

Query: 136 TSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
            +   +  +   LFN    +P I  KA+WA+++ Q             + S    R + F
Sbjct: 190 DTYIKENAQRTYLFNAIDTIPCIRKKADWAIRWIQ------------DKESTFAQRLVAF 237

Query: 193 LC 194
             
Sbjct: 238 AA 239


>gi|85109237|ref|XP_962820.1| ribonucleoside-diphosphate reductase M2 subunit [Neurospora crassa
           OR74A]
 gi|30316285|sp|Q9C167|RIR2_NEUCR RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|16273691|gb|AAK14804.2| small subunit of ribonucleotide reductase [Neurospora crassa]
 gi|28924456|gb|EAA33584.1| ribonucleoside-diphosphate reductase M2 subunit [Neurospora crassa
           OR74A]
          Length = 410

 Score =  225 bits (574), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 17/186 (9%)

Query: 12  AGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSK 71
           A   +    ++ +L        L P+KY   W+ Y  A  + W   E+ +  DL  W   
Sbjct: 67  APTLKPEEANEPLLTENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWN-- 124

Query: 72  NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
           N L DDE+  I   L FFA+S+ +V  N+V      +  PE R +   Q   E +HS T+
Sbjct: 125 NRLNDDEKFFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETY 184

Query: 132 QYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
             +I +   +  +   LFN    +P I  KA+WAL++               + S    R
Sbjct: 185 SLLIDTYIKEPSQRTYLFNAIDTIPCIRKKADWALRWI------------TDKSSTFAQR 232

Query: 189 SLRFLC 194
            + F  
Sbjct: 233 LVAFAA 238


>gi|76630259|ref|XP_584910.2| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 1 [Bos
           taurus]
 gi|297480610|ref|XP_002691527.1| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 1 [Bos
           taurus]
 gi|296482361|gb|DAA24476.1| ribonucleotide reductase M2 polypeptide isoform 1 [Bos taurus]
          Length = 389

 Score =  225 bits (574), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 10/178 (5%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           +V+D+ +L        + P++Y   W+ Y  A  + W   EV +  D+  W+    L  +
Sbjct: 66  SVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWE---ALKSE 122

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +I +
Sbjct: 123 ERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDT 182

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
              D  E   LFN    +P +  KA+WAL++    ++     + +R  +      + F
Sbjct: 183 YIKDSKEREFLFNAIETMPCVKKKADWALRWIGDKAA----TYGERVVAFAAVEGIFF 236


>gi|260950985|ref|XP_002619789.1| hypothetical protein CLUG_00948 [Clavispora lusitaniae ATCC 42720]
 gi|238847361|gb|EEQ36825.1| hypothetical protein CLUG_00948 [Clavispora lusitaniae ATCC 42720]
          Length = 419

 Score =  225 bits (574), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 52/180 (28%), Positives = 81/180 (45%), Gaps = 9/180 (5%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           +    D+ +L        L P+KY   W+ Y  A  + W   E+ +  D+  WK  N +T
Sbjct: 88  KAQEKDEPLLVENKRRFVLFPIKYNEIWQMYKKAEASFWTAEEIDLSKDINDWK--NRMT 145

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           D+ER  I R L FFA+S+ +V  N+V      +  PE + +   Q   E +HS T+  +I
Sbjct: 146 DNERFFISRVLAFFAASDGIVNENLVENFSAEVQIPEAKCFYGFQIMMENIHSETYSLLI 205

Query: 136 TSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
            S   D  E   LFN    +P I  KA WAL++     +     + +R  +      + F
Sbjct: 206 DSYIKDPKEADFLFNAIENIPCIKKKAEWALRWI----ADDEALFAERLVAFAAVEGIFF 261


>gi|224046583|ref|XP_002198998.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
          Length = 362

 Score =  225 bits (573), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 10/189 (5%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           +S   A E   ++D++ +L        + P++Y   W+ Y  A  + W   EV +  DL 
Sbjct: 28  MSSSSAAENGSDLDEEPLLRKNHRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLP 87

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            W   N L  DE+  I   L FFA+S+ +V  N+V    + +  PE R +   Q   E V
Sbjct: 88  HW---NKLKADEKYFISHVLAFFAASDGIVNENLVARFSQEVQIPEARCFYGFQILIENV 144

Query: 127 HSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           HS  +  +I +   D  +   LFN    +P +  KA+WAL++ +   S     + +R  +
Sbjct: 145 HSEMYSLLIDTYIKDPKKRDFLFNAIETMPCVKKKADWALKWIEDRES----TFGERVVA 200

Query: 184 RILTRSLRF 192
                 + F
Sbjct: 201 FAAVEGIFF 209


>gi|242777635|ref|XP_002479074.1| ribonucleotide reductase small subunit RnrA, putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218722693|gb|EED22111.1| ribonucleotide reductase small subunit RnrA, putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 406

 Score =  225 bits (573), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 51/195 (26%), Positives = 81/195 (41%), Gaps = 17/195 (8%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
                +P  A   +    ++ +L        L P+KY   W+ Y  A  + W   E+ + 
Sbjct: 54  PAVQEAPKVAPGIKEMEVNEPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLS 113

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            DL  W   N L DDER  + R L FFA+S+ +V  N+V      +  PE R +   Q  
Sbjct: 114 KDLHDWN--NRLNDDERYFVSRVLAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIM 171

Query: 123 EEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNK 179
            E +HS T+  +I +   +  +   LF+    +P I  KA+WAL++              
Sbjct: 172 MENIHSETYSLLIDTYINEPKQRTYLFDAIDNIPCIRKKADWALRWI------------S 219

Query: 180 RRRSRILTRSLRFLC 194
            + S    R + F  
Sbjct: 220 DKESTFAQRLVAFAA 234


>gi|310798394|gb|EFQ33287.1| ribonucleotide reductase [Glomerella graminicola M1.001]
          Length = 413

 Score =  225 bits (573), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 49/190 (25%), Positives = 80/190 (42%), Gaps = 17/190 (8%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
            P+     +    D+ +L        L P+KY   W+ Y  A  + W   E+ +  DL  
Sbjct: 66  KPVVVPGIKEQEMDEPLLQENGQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHD 125

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           W +K  + +DE+  I   L FFA+S+ +V  N+V      +  PE R +   Q   E +H
Sbjct: 126 WNNK--INEDEKYFISHILAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIH 183

Query: 128 SHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           S T+  +I +   +  +   LFN    +P I  KA+WAL++                +S 
Sbjct: 184 SETYSLLIDTYIKEPAQRTYLFNAIDTIPCIRKKADWALKWI------------SDEKSS 231

Query: 185 ILTRSLRFLC 194
              R + F  
Sbjct: 232 FAQRLVAFAA 241


>gi|312381384|gb|EFR27142.1| hypothetical protein AND_06323 [Anopheles darlingi]
          Length = 390

 Score =  225 bits (573), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 11/193 (5%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
            +T LS ++  E+  +   + +L        + P++Y   W+ Y  A  + W   EV + 
Sbjct: 53  PSTALSEVE-PEQPFDPSIEPLLMDNPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLS 111

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D+  W   + L   ER  I   L FFA+S+ +V  N+V    + +   E R +   Q  
Sbjct: 112 KDMKDW---DSLKPSERHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIA 168

Query: 123 EEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNK 179
            E VHS  +  +I +   D  E   LFN    +P +  KA+WA+ +  +  +     + +
Sbjct: 169 MENVHSEMYSLLIDTYIRDPKERDFLFNAIETLPCVKRKADWAMNWISSKKA----NYGE 224

Query: 180 RRRSRILTRSLRF 192
           R  +      + F
Sbjct: 225 RIVAFAAVEGIFF 237


>gi|118089009|ref|XP_001231545.1| PREDICTED: similar to small subunit ribonucleotide reductase
           isoform 1 [Gallus gallus]
          Length = 392

 Score =  225 bits (573), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 44/194 (22%), Positives = 83/194 (42%), Gaps = 10/194 (5%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           +  T ++ +   +     +++ +L        + P++Y   W+ Y  A  + W   EV +
Sbjct: 53  SEGTPVTALCPPQVARGAEEEPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTAEEVDL 112

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             DL  W+S   L  +E+  I   L FFA+S+ +V  N+V    + +   E R +   Q 
Sbjct: 113 SKDLQHWES---LKPEEKYFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQI 169

Query: 122 FEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWN 178
             E +HS  +  +I +   D  E   LFN    +P +  KA+WA+++           + 
Sbjct: 170 AMENIHSEMYSLLIDTYIKDSKEREFLFNAIETLPCVKKKADWAIRWI----GDKKATYG 225

Query: 179 KRRRSRILTRSLRF 192
           +R  +      + F
Sbjct: 226 ERVVAFAAVEGIFF 239


>gi|169613737|ref|XP_001800285.1| hypothetical protein SNOG_10001 [Phaeosphaeria nodorum SN15]
 gi|111061216|gb|EAT82336.1| hypothetical protein SNOG_10001 [Phaeosphaeria nodorum SN15]
          Length = 409

 Score =  225 bits (573), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 50/187 (26%), Positives = 78/187 (41%), Gaps = 18/187 (9%)

Query: 12  AGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSK 71
           A   +     + +L    +   L P+KY   W+ Y  A  + W   E+ +  DL  W  +
Sbjct: 61  APTIKEEEAHEPLLQENPNRFVLFPIKYHDVWQMYKKAEASFWTAEEIDLSKDLHDWNKR 120

Query: 72  NGLTDDERLMIKRNLGFFASSESLVANNIV-LAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
             L DDER  I   L FFA+S+ +V  N+V       +  PE R +   Q   E +HS T
Sbjct: 121 --LNDDERFFISHVLAFFAASDGIVNENLVDERFSSEVQIPEARCFYGFQIMMENIHSET 178

Query: 131 FQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILT 187
           +  +I +   +  +   LFN    +P I  KA+WAL++               + S    
Sbjct: 179 YSLLIDTYISEPRQRTYLFNAIDNIPCIRKKADWALKWI------------SDKNSTFAN 226

Query: 188 RSLRFLC 194
           R + F  
Sbjct: 227 RLVAFAA 233


>gi|169779219|ref|XP_001824074.1| ribonucleoside-diphosphate reductase small chain [Aspergillus
           oryzae RIB40]
 gi|238499845|ref|XP_002381157.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           flavus NRRL3357]
 gi|83772813|dbj|BAE62941.1| unnamed protein product [Aspergillus oryzae]
 gi|220692910|gb|EED49256.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           flavus NRRL3357]
          Length = 405

 Score =  224 bits (572), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 51/198 (25%), Positives = 85/198 (42%), Gaps = 13/198 (6%)

Query: 2   ANNTGLSPIQAGEK----RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPT 57
              T   P +   K    +    ++ +L        L P+KY   W+ Y  A  + W   
Sbjct: 50  TKTTVEKPTEVSSKIASIKEMEANEPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAE 109

Query: 58  EVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYL 117
           E+ +  DL  W   N L DDER  I R L FFA+S+ +V  N++      +  PE R + 
Sbjct: 110 EIDLSKDLHDWH--NRLNDDERFFISRVLAFFAASDGIVNENLLERFSGEVQIPEARCFY 167

Query: 118 LRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSF 174
             Q   E +H+ T+  +I +   +  +   LF+    +P I  KA+WA+++ Q   S   
Sbjct: 168 GFQIMIENIHAETYSLLIDTYIKEPKQRTYLFDAIDTIPCIRKKADWAIRWIQDQES--- 224

Query: 175 HYWNKRRRSRILTRSLRF 192
             + +R  +      + F
Sbjct: 225 -TFGQRLVAFAAVEGIFF 241


>gi|115387427|ref|XP_001211219.1| ribonucleoside-diphosphate reductase small chain [Aspergillus
           terreus NIH2624]
 gi|114195303|gb|EAU37003.1| ribonucleoside-diphosphate reductase small chain [Aspergillus
           terreus NIH2624]
          Length = 401

 Score =  224 bits (572), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 9/175 (5%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L        L P+KY   W+ Y  A  + W   E+ +  DL  W   N L +DER 
Sbjct: 71  NEPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWN--NRLNEDERY 128

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I   L FFA+S+ +V  N+V      +  PE R +   Q   E +HS T+  +I +   
Sbjct: 129 FISHVLAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMIENIHSETYSLLIDTYIK 188

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           +  +   LF+    +P I  KA+WA+++ Q   S     + +R  +      + F
Sbjct: 189 EPKQRTYLFDAIDNIPCIAKKADWAIKWIQDQES----TFGQRLVAFAAVEGIFF 239


>gi|116191729|ref|XP_001221677.1| hypothetical protein CHGG_05582 [Chaetomium globosum CBS 148.51]
 gi|88181495|gb|EAQ88963.1| hypothetical protein CHGG_05582 [Chaetomium globosum CBS 148.51]
          Length = 409

 Score =  224 bits (572), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 17/190 (8%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           S   A   + +  D+ +L        L P+KY   W+ Y  A  + W   E+ +  DL  
Sbjct: 62  SAAVAPTIKADEADEPLLQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHD 121

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           W +K  + DDE+  I   L FFA+S+ +V  N+V      +  PE R +   Q   E +H
Sbjct: 122 WNNK--INDDEKYFISHILAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIH 179

Query: 128 SHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           S T+  +I +   +  +   LFN    +P+I  KA+WAL++               ++S 
Sbjct: 180 SETYSLLIDTYIKEPAQRTHLFNAIDTIPAIRKKADWALRWI------------TDQKST 227

Query: 185 ILTRSLRFLC 194
              R + F  
Sbjct: 228 FAQRLVAFAA 237


>gi|302497417|ref|XP_003010709.1| hypothetical protein ARB_03411 [Arthroderma benhamiae CBS 112371]
 gi|291174252|gb|EFE30069.1| hypothetical protein ARB_03411 [Arthroderma benhamiae CBS 112371]
          Length = 408

 Score =  224 bits (572), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 49/196 (25%), Positives = 81/196 (41%), Gaps = 20/196 (10%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           A    + P      +    ++ +L        L P+KY   W+ Y  A  + W   E+ +
Sbjct: 60  AETQVVKP---KTPKELEAEEPLLQENPQRFVLFPIKYREIWQMYKKAEASFWTAEEIDL 116

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D+  W   N L DDER  I   L FFA+S+ +V  N++      +  PE R +   Q 
Sbjct: 117 SKDIHDWN--NRLNDDERYFISHVLAFFAASDGIVNENLLERFSNEVQVPEARCFYGFQI 174

Query: 122 FEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWN 178
             E +HS T+  +I +   ++ +   LF     +P I  KA+WA+++ Q           
Sbjct: 175 MMENIHSETYSLLIDTYIKEQKQRTYLFEAIDTIPCIRKKADWAIRWIQ----------- 223

Query: 179 KRRRSRILTRSLRFLC 194
             + S    R + F  
Sbjct: 224 -DKDSTFAQRLVAFAA 238


>gi|145580571|pdb|2UW2|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase
           Subunit R2
          Length = 332

 Score =  224 bits (572), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 10/184 (5%)

Query: 12  AGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSK 71
                  V+D+ +L        + P++Y   W+ Y  A  + W   EV +  D+  W+S 
Sbjct: 3   TKAAAPGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWES- 61

Query: 72  NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
             L  +ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +
Sbjct: 62  --LKPEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMY 119

Query: 132 QYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
             +I +   D  E   LFN    +P +  KA+WAL++     +     + +R  +     
Sbjct: 120 SLLIDTYIKDPKEREFLFNAIETMPCVKKKADWALRWIGDKEA----TYGERVVAFAAVE 175

Query: 189 SLRF 192
            + F
Sbjct: 176 GIFF 179


>gi|146418573|ref|XP_001485252.1| hypothetical protein PGUG_02981 [Meyerozyma guilliermondii ATCC
           6260]
 gi|146390725|gb|EDK38883.1| hypothetical protein PGUG_02981 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 418

 Score =  224 bits (571), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 48/177 (27%), Positives = 77/177 (43%), Gaps = 17/177 (9%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L   +    + P+KY   W+ Y  A  + W   E+ +  D+  W   N L D+ER 
Sbjct: 90  EEPLLMENTRRFVMFPIKYHEIWKMYKKAEASFWTAEEIDLGKDMHDWN--NRLNDNERY 147

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I R L FFA+S+ +V  N+V      +  PE + +   Q   E +HS T+  +I +   
Sbjct: 148 FISRILAFFAASDGIVNENLVENFSAEVQIPEAKCFYGFQIMMENIHSETYSLLIDTYIK 207

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           D  E   LFN    +P I  KA+WAL++                 +    R + F  
Sbjct: 208 DPKEADFLFNAIENIPCIKKKADWALRWIN------------DDDALFGERLVAFAA 252


>gi|70997335|ref|XP_753417.1| ribonucleotide reductase small subunit RnrA [Aspergillus fumigatus
           Af293]
 gi|66851053|gb|EAL91379.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           fumigatus Af293]
 gi|159126856|gb|EDP51972.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           fumigatus A1163]
          Length = 405

 Score =  224 bits (571), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 47/177 (26%), Positives = 75/177 (42%), Gaps = 17/177 (9%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L        L P+KY   W+ Y  A  + W   E+ +  DL  W   N L DDER 
Sbjct: 72  NEPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWN--NRLNDDERY 129

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I   L FFA+S+ +V  N++      +  PE R +   Q   E +HS T+  +I +   
Sbjct: 130 FISHVLAFFAASDGIVNENLLERFSNEVQVPEARCFYGFQIMIENIHSETYSLLIDTYIK 189

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           +  +   LF+    +P I  KA WA+++               + S    R + F  
Sbjct: 190 EPKQRTYLFDAIDTIPCIRKKAQWAMRWI------------SDKESTFAQRLVAFAA 234


>gi|302409182|ref|XP_003002425.1| ribonucleoside-diphosphate reductase small chain [Verticillium
           albo-atrum VaMs.102]
 gi|261358458|gb|EEY20886.1| ribonucleoside-diphosphate reductase small chain [Verticillium
           albo-atrum VaMs.102]
          Length = 414

 Score =  224 bits (571), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 52/192 (27%), Positives = 82/192 (42%), Gaps = 17/192 (8%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
            G   + A   +    D+ +L        L P+KY   W+ Y  A  + W   E+ +  D
Sbjct: 64  EGDKAVVAPGIKDFEADEPLLRENGQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKD 123

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           L  W +K  + DDE+  I   L FFA+S+ +V  N+V      +  PE R +   Q   E
Sbjct: 124 LHDWNNK--INDDEKYFISHILAFFAASDGIVNENLVERFSAEVQVPEARCFYGFQIMME 181

Query: 125 AVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRR 181
            +HS T+  +I +   +  +   LFN    +P I  KA+WAL +               +
Sbjct: 182 NIHSETYSLLIDTYIKEPAQRTYLFNAIDTIPCIRKKADWALTWI------------TDK 229

Query: 182 RSRILTRSLRFL 193
           +S   TR + F 
Sbjct: 230 KSTFATRLVAFA 241


>gi|326472581|gb|EGD96590.1| ribonucleotide reductase small subunit RnrA [Trichophyton tonsurans
           CBS 112818]
          Length = 408

 Score =  223 bits (570), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 49/196 (25%), Positives = 81/196 (41%), Gaps = 20/196 (10%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           A    + P      +    ++ +L        L P+KY   W+ Y  A  + W   E+ +
Sbjct: 60  AETQVVKP---KTPKELEAEEPLLQENPQRFVLFPIKYREIWQMYKKAEASFWTAEEIDL 116

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D+  W   N L DDER  I   L FFA+S+ +V  N++      +  PE R +   Q 
Sbjct: 117 SKDIHDWN--NRLNDDERFFISHVLAFFAASDGIVNENLLERFSNEVQVPEARCFYGFQI 174

Query: 122 FEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWN 178
             E +HS T+  +I +   ++ +   LF     +P I  KA+WA+++ Q           
Sbjct: 175 MMENIHSETYSLLIDTYIKEQKQRTYLFEAIDTIPCIRKKADWAIRWIQ----------- 223

Query: 179 KRRRSRILTRSLRFLC 194
             + S    R + F  
Sbjct: 224 -DKNSTFSQRLVAFAA 238


>gi|326917964|ref|XP_003205263.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
           [Meleagris gallopavo]
          Length = 353

 Score =  223 bits (570), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 49/188 (26%), Positives = 84/188 (44%), Gaps = 13/188 (6%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           SP + G   + + ++ +L        + P+++   W+ Y  A  + W   EV +  DL  
Sbjct: 23  SPSENG---LKLHEEPLLRKNPRRFVIFPIQHPDIWKMYKQAQASFWTAEEVDLSKDLPH 79

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           W   N L  DE+  I   L FFA+S+ +V  N+V    + +  PE R +   Q   E VH
Sbjct: 80  W---NKLKPDEKYFISHILAFFAASDGIVNENLVARFSQEVQIPEARCFYGFQILIENVH 136

Query: 128 SHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           S  +  +I +   D  +   LFN    +P +  KA+WAL++ +   S     + +R  + 
Sbjct: 137 SEMYSLLIDTYIKDPEKRDFLFNAIETMPCVKKKADWALKWIEDRHS----TFGERVVAF 192

Query: 185 ILTRSLRF 192
                + F
Sbjct: 193 AAVEGIFF 200


>gi|150863757|ref|XP_001382334.2| small subunit of ribonucleotide reductase [Scheffersomyces stipitis
           CBS 6054]
 gi|149385013|gb|ABN64305.2| small subunit of ribonucleotide reductase [Scheffersomyces stipitis
           CBS 6054]
          Length = 417

 Score =  223 bits (570), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 53/186 (28%), Positives = 83/186 (44%), Gaps = 9/186 (4%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           +   E +    D+ +L   +    L P+KY   W+ Y  A  + W   E+ +  D+  W 
Sbjct: 79  VHRHELKAMEKDEPLLMENTRRFVLFPIKYNEVWQMYKKAEASFWTAEEIDLSKDITDWN 138

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
             N L D+ER  I R L FFA+S+ +V  N+V      +  PE + +   Q   E +HS 
Sbjct: 139 --NRLNDNERFFISRILAFFAASDGIVNENLVENFSAEVQIPEAKCFYGFQIMMENIHSE 196

Query: 130 TFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRIL 186
           T+  +I S   D  E   LFN    +P I  KA+WAL++     S     + +R  +   
Sbjct: 197 TYSLLIDSYIKDPKEADFLFNAIDNIPCIRKKADWALRWI----SDDDALFGERLVAFAA 252

Query: 187 TRSLRF 192
              + F
Sbjct: 253 VEGIFF 258


>gi|298713498|emb|CBJ27053.1| Ribonucleoside-diphosphate reductase small chain [Ectocarpus
           siliculosus]
          Length = 504

 Score =  223 bits (569), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 43/176 (24%), Positives = 77/176 (43%), Gaps = 19/176 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +  A      L P+K+   W+ Y  A  + W   EV +  D   W+    LT +E+  
Sbjct: 181 EPICRADPSRFVLFPIKHPELWDMYKKAKASFWTVEEVDLSQDSRDWE---ALTGNEQHF 237

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           I   L FFA+S+ +V  N+V    + +  PE R +   Q   E++H   +  ++ +   D
Sbjct: 238 ISMVLAFFAASDGIVMENLVERFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKD 297

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + E   LFN Y ++P +  KA+WA+++  +              +    R + F  
Sbjct: 298 KQERDNLFNAYNDIPCVKQKADWAMRWIGS-------------DATFAERLVAFAA 340


>gi|327298815|ref|XP_003234101.1| ribonucleotide reductase small subunit RnrA [Trichophyton rubrum
           CBS 118892]
 gi|326464279|gb|EGD89732.1| ribonucleotide reductase small subunit RnrA [Trichophyton rubrum
           CBS 118892]
          Length = 408

 Score =  223 bits (569), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 49/196 (25%), Positives = 81/196 (41%), Gaps = 20/196 (10%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           A    + P      +    ++ +L        L P+KY   W+ Y  A  + W   E+ +
Sbjct: 60  AETQVVKP---KTPKELEAEEPLLQENPQRFVLFPIKYREIWQMYKKAEASFWTAEEIDL 116

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D+  W   N L DDER  I   L FFA+S+ +V  N++      +  PE R +   Q 
Sbjct: 117 SKDIHDWN--NRLNDDERFFISHVLAFFAASDGIVNENLLERFSNEVQVPEARCFYGFQI 174

Query: 122 FEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWN 178
             E +HS T+  +I +   ++ +   LF     +P I  KA+WA+++ Q           
Sbjct: 175 MMENIHSETYSLLIDTYIKEQKQRTYLFEAIDTIPCIRKKADWAIRWIQ----------- 223

Query: 179 KRRRSRILTRSLRFLC 194
             + S    R + F  
Sbjct: 224 -DKNSTFAQRLVAFAA 238


>gi|255954081|ref|XP_002567793.1| Pc21g07530 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211589504|emb|CAP95650.1| Pc21g07530 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 400

 Score =  223 bits (568), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 50/176 (28%), Positives = 77/176 (43%), Gaps = 17/176 (9%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L        + P+KY   W+ Y  A  + W   E+ +  DL  W   N L DDER  
Sbjct: 69  EPLLQENPHRFVMFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWH--NRLNDDERYF 126

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           I   L FFA+S+ +V  N+V      +  PE R +   Q   E +HS T+  +I +   +
Sbjct: 127 ISHVLAFFAASDGIVNENLVERFSAEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKE 186

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             +   LF+    +P IT KANWA+++               R S   +R + F  
Sbjct: 187 PKQRTYLFDAIDTIPCITKKANWAIRWIN------------DRESTFASRLVAFAA 230


>gi|67515571|ref|XP_657671.1| hypothetical protein AN0067.2 [Aspergillus nidulans FGSC A4]
 gi|40746089|gb|EAA65245.1| hypothetical protein AN0067.2 [Aspergillus nidulans FGSC A4]
 gi|259489743|tpe|CBF90266.1| TPA: Ribonucleotide reductase [Source:UniProtKB/TrEMBL;Acc:Q9HEW8]
           [Aspergillus nidulans FGSC A4]
          Length = 406

 Score =  223 bits (568), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 21/200 (10%)

Query: 2   ANNTGLSPIQAGEKRVNV----DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPT 57
                  P++  +  ++V     ++ +L        L P+KY   W+ Y  A  + W   
Sbjct: 50  TKPATEKPVEPSKAALDVKAIEANEPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAE 109

Query: 58  EVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYL 117
           E+ +  DL  W   N L +DER  I R L FFA+S+ +V  N++      +  PE R + 
Sbjct: 110 EIDLSKDLHDWN--NRLNEDERYFISRVLAFFAASDGIVNENLLERFSGEVQIPEARCFY 167

Query: 118 LRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSF 174
             Q   E +H+ T+  +I +   +  +   LF+    +P I  KA+WA+++ Q       
Sbjct: 168 GFQIMIENIHAETYSLLIDTYIKEPKQRTYLFDAIDTIPCIRKKADWAIKWIQ------- 220

Query: 175 HYWNKRRRSRILTRSLRFLC 194
                 + S    R + F  
Sbjct: 221 -----DKESTFAQRLVAFAA 235


>gi|118087248|ref|XP_418364.2| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 353

 Score =  223 bits (568), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 10/185 (5%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
            A E  +   ++ +L        + P+++   W+ Y  A  + W   EV +  DL  W  
Sbjct: 23  SAAENGLKPHEEPLLRKNPRRFVIFPIQHPDIWKMYKQAQASFWTAEEVDLSKDLPHW-- 80

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            N L  DE+  I   L FFA+S+ +V  N+V    + +  PE R +   Q   E VHS  
Sbjct: 81  -NKLKADEKYFISHVLAFFAASDGIVNENLVARFSQEVQIPEARCFYGFQILIENVHSEM 139

Query: 131 FQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILT 187
           +  +I +   D  +   LFN    +P +  KA+WAL++ +   S     + +R  +    
Sbjct: 140 YSLLIDTYIKDPEKRDFLFNAIETMPCVKKKADWALKWIEDRES----TFGERVVAFAAV 195

Query: 188 RSLRF 192
             + F
Sbjct: 196 EGIFF 200


>gi|118089007|ref|XP_419948.2| PREDICTED: similar to small subunit ribonucleotide reductase
           isoform 2 [Gallus gallus]
          Length = 384

 Score =  223 bits (568), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 47/198 (23%), Positives = 83/198 (41%), Gaps = 13/198 (6%)

Query: 1   MANNTGLSPIQAGEKRV---NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPT 57
           +A+ T     Q  E        +++ +L        + P++Y   W+ Y  A  + W   
Sbjct: 41  LASKTARKIFQESEGTPVARGAEEEPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTAE 100

Query: 58  EVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYL 117
           EV +  DL  W+S   L  +E+  I   L FFA+S+ +V  N+V    + +   E R + 
Sbjct: 101 EVDLSKDLQHWES---LKPEEKYFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFY 157

Query: 118 LRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSF 174
             Q   E +HS  +  +I +   D  E   LFN    +P +  KA+WA+++         
Sbjct: 158 GFQIAMENIHSEMYSLLIDTYIKDSKEREFLFNAIETLPCVKKKADWAIRWI----GDKK 213

Query: 175 HYWNKRRRSRILTRSLRF 192
             + +R  +      + F
Sbjct: 214 ATYGERVVAFAAVEGIFF 231


>gi|119478853|ref|XP_001259462.1| ribonucleotide reductase small subunit RnrA, putative [Neosartorya
           fischeri NRRL 181]
 gi|119407616|gb|EAW17565.1| ribonucleotide reductase small subunit RnrA, putative [Neosartorya
           fischeri NRRL 181]
          Length = 405

 Score =  223 bits (568), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 47/177 (26%), Positives = 75/177 (42%), Gaps = 17/177 (9%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L        L P+KY   W+ Y  A  + W   E+ +  DL  W   N L DDER 
Sbjct: 72  NEPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWN--NRLNDDERY 129

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I   L FFA+S+ +V  N++      +  PE R +   Q   E +HS T+  +I +   
Sbjct: 130 FISHVLAFFAASDGIVNENLLERFSNEVQVPEARCFYGFQIMIENIHSETYSLLIDTYIK 189

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           +  +   LF+    +P I  KA WA+++               + S    R + F  
Sbjct: 190 EPKQRTYLFDAIDTIPCIAKKAQWAMRWI------------SDKESTFAQRLVAFAA 234


>gi|11878241|gb|AAG40862.1| ribonucleotide reductase [Emericella nidulans]
          Length = 406

 Score =  223 bits (568), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 21/200 (10%)

Query: 2   ANNTGLSPIQAGEKRVNV----DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPT 57
                  P++  +  ++V     ++ +L        L P+KY   W+ Y  A  + W   
Sbjct: 50  TKPATEKPVEPSKAALDVKAIEANEPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAE 109

Query: 58  EVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYL 117
           E+ +  DL  W   N L +DER  I R L FFA+S+ +V  N++      +  PE R + 
Sbjct: 110 EIDLSKDLHDWN--NRLNEDERYFISRVLAFFAASDGIVNENLLERFSGEVQIPEARCFY 167

Query: 118 LRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSF 174
             Q   E +H+ T+  +I +   +  +   LF+    +P I  KA+WA+++ Q       
Sbjct: 168 GFQIMIENIHAETYSLLIDTYIKEPKQRTYLFDAIDTIPCIRKKADWAIKWIQ------- 220

Query: 175 HYWNKRRRSRILTRSLRFLC 194
                 + S    R + F  
Sbjct: 221 -----DKESTFAQRLVAFAA 235


>gi|294659365|ref|XP_461732.2| DEHA2G04268p [Debaryomyces hansenii CBS767]
 gi|199433907|emb|CAG90185.2| DEHA2G04268p [Debaryomyces hansenii]
          Length = 426

 Score =  222 bits (567), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 17/177 (9%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L   +    L P+KY   W+ Y  A  + W   E+ +  D   W  K  L ++ER 
Sbjct: 101 EEPLLIENTRRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLGKDTHDWNEK--LNNNERY 158

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I R L FFA+S+ +V  N+V      +  PE + +   Q   E +HS T+  +I +   
Sbjct: 159 FISRILAFFAASDGIVNENLVENFSAEVQVPEAKCFYGFQIMMENIHSETYSLLIDTYIK 218

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           D  E   LFN    +P I  KA+WAL++                 +    R + F  
Sbjct: 219 DPKEADFLFNAIDNIPCIKKKADWALRWIN------------DDDALFGERLVAFAA 263


>gi|327261309|ref|XP_003215473.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           isoform 1 [Anolis carolinensis]
          Length = 394

 Score =  222 bits (567), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 10/178 (5%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           N  D+ +L        + P++Y   W+ Y  A  + W   EV +  DL  W+S   L  D
Sbjct: 71  NAQDEPLLRDNPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWES---LKPD 127

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +I +
Sbjct: 128 EKYFISHILAFFAASDGIVNENLVERFSQEIQVTEARCFYGFQIAMENIHSEMYSLLIDT 187

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
              D  E   LFN    +P +  KA+WA+++     +     + +R  +      + F
Sbjct: 188 YIKDPKEREYLFNAIETLPCVKRKADWAMRWIGDKHA----TYGERVVAFAAVEGIFF 241


>gi|224129040|ref|XP_002328875.1| predicted protein [Populus trichocarpa]
 gi|222839305|gb|EEE77642.1| predicted protein [Populus trichocarpa]
          Length = 329

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 46/177 (25%), Positives = 75/177 (42%), Gaps = 19/177 (10%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L    D   + P++Y   WE Y  A  + W   EV +  D+  W++   LT DE+ 
Sbjct: 6   EEPLLAENPDRFCMFPIQYPSIWEMYKKAEASFWTAEEVDLSSDIRHWEN---LTPDEKH 62

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I   L FFA+S+ +V  N+     + +   E R +   Q   E +HS  +  ++ +   
Sbjct: 63  FISHVLAFFAASDGIVLENLAGRFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK 122

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           D  E   LF+    VP +  KA WAL++     S                R + F C
Sbjct: 123 DSEEKNRLFHAIETVPCVAKKARWALRWIDGSES-------------FAERLVAFAC 166


>gi|224055741|ref|XP_002298630.1| predicted protein [Populus trichocarpa]
 gi|222845888|gb|EEE83435.1| predicted protein [Populus trichocarpa]
          Length = 329

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 47/177 (26%), Positives = 75/177 (42%), Gaps = 19/177 (10%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L    D   + P++Y   WE Y  A  + W   EV +  D+  W++   LT DE+ 
Sbjct: 6   EEPLLAENPDRFCMFPIQYPSIWEMYKKAEASFWTAEEVDLSSDVGHWEN---LTPDEKH 62

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I   L FFA+S+ +V  NI     + +   E R +   Q   E +HS  +  ++ +   
Sbjct: 63  FISHVLAFFAASDGIVLENIAGRFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIK 122

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           D  E   LF+    VP +  KA WAL++     S                R + F C
Sbjct: 123 DSTEKNRLFHAIETVPCVAKKAEWALRWIDGGES-------------FAERLIAFAC 166


>gi|169860861|ref|XP_001837065.1| ribonucleotide reductase small subunit [Coprinopsis cinerea
           okayama7#130]
 gi|116501787|gb|EAU84682.1| ribonucleotide reductase small subunit [Coprinopsis cinerea
           okayama7#130]
          Length = 414

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 17/193 (8%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
           T L     GE  +   ++ +L        L P++Y   W+ Y  A  + W   E+ +  D
Sbjct: 66  TLLRRKFVGEVDLPESEEPLLKESKRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKD 125

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           L  W +K  L D+ER  I   L FFA+S+ +V  N++      +   E R +   Q   E
Sbjct: 126 LHDWNNK--LNDNERHFISHVLAFFAASDGIVNENLLERFSNEVQAAEARCFYGFQIMME 183

Query: 125 AVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRR 181
            +HS T+  +I +   D  +   LF+    +P I  KA+WAL +               +
Sbjct: 184 NIHSETYSLLIDTYIKDPAQRDYLFDAVDTIPCIKKKADWALTWI------------SDQ 231

Query: 182 RSRILTRSLRFLC 194
           +S    R + F  
Sbjct: 232 KSTFAERLVAFAA 244


>gi|148234092|ref|NP_001079369.1| ribonucleotide reductase M2 B (TP53 inducible) [Xenopus laevis]
 gi|27371032|gb|AAH41209.1| MGC52676 protein [Xenopus laevis]
          Length = 386

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 47/188 (25%), Positives = 81/188 (43%), Gaps = 10/188 (5%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           +P     K   ++D+ +L        + P++Y   W+ Y  A  + W   EV +  DL  
Sbjct: 53  TPKSKAPKNPRLEDEPLLKDNPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQH 112

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           W+S   L  +E+  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +H
Sbjct: 113 WES---LKKEEKYFISHVLAFFAASDGIVNENLVERFSKEVQVTEARCFYGFQIAMENIH 169

Query: 128 SHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           S  +  +I +   D  E   LFN    +P +  KA+WAL +     +     + +R  + 
Sbjct: 170 SEMYSLLIDTYVKDPKEREYLFNAIETLPCVKKKADWALHWIGDKQA----TFGERVVAF 225

Query: 185 ILTRSLRF 192
                + F
Sbjct: 226 AAVEGIFF 233


>gi|18079279|ref|NP_525111.1| ribonucleoside diphosphate reductase small subunit [Drosophila
           melanogaster]
 gi|12644287|sp|P48592|RIR2_DROME RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|10727628|gb|AAF58599.2| ribonucleoside diphosphate reductase small subunit [Drosophila
           melanogaster]
 gi|15292183|gb|AAK93360.1| LD41588p [Drosophila melanogaster]
 gi|220946286|gb|ACL85686.1| CG8975-PA [synthetic construct]
 gi|220955972|gb|ACL90529.1| RnrS-PA [synthetic construct]
          Length = 393

 Score =  222 bits (566), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 10/186 (5%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           ++      +   + +L        + P++Y   W+ Y  A  + W   EV +  DL  W 
Sbjct: 62  MEKSVTPFDPSLEPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWH 121

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
               L DDER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E VHS 
Sbjct: 122 ---RLKDDERHFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSE 178

Query: 130 TFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRIL 186
            +  +I +   D  +   LFN    +P++  KA+WAL +  + S+     + +R  +   
Sbjct: 179 MYSVLIDTYIRDPHQREYLFNAIETMPAVKRKADWALSWISSKSA----NFGERIIAFAA 234

Query: 187 TRSLRF 192
              + F
Sbjct: 235 VEGIFF 240


>gi|327261311|ref|XP_003215474.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           isoform 2 [Anolis carolinensis]
          Length = 390

 Score =  222 bits (565), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 10/178 (5%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           N  D+ +L        + P++Y   W+ Y  A  + W   EV +  DL  W+S   L  D
Sbjct: 67  NAQDEPLLRDNPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWES---LKPD 123

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +I +
Sbjct: 124 EKYFISHILAFFAASDGIVNENLVERFSQEIQVTEARCFYGFQIAMENIHSEMYSLLIDT 183

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
              D  E   LFN    +P +  KA+WA+++     +     + +R  +      + F
Sbjct: 184 YIKDPKEREYLFNAIETLPCVKRKADWAMRWIGDKHA----TYGERVVAFAAVEGIFF 237


>gi|195485577|ref|XP_002091148.1| GE13485 [Drosophila yakuba]
 gi|194177249|gb|EDW90860.1| GE13485 [Drosophila yakuba]
          Length = 393

 Score =  222 bits (565), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 10/186 (5%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           ++      +   + +L        + P++Y   W+ Y  A  + W   EV +  DL  W 
Sbjct: 62  MEKSVTPFDPSLEPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWH 121

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
               L DDER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E VHS 
Sbjct: 122 ---RLKDDERHFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSE 178

Query: 130 TFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRIL 186
            +  +I +   D  +   LFN    +P++  KA+WAL +  + S+     + +R  +   
Sbjct: 179 MYSVLIDTYIRDPHQREYLFNAIETMPAVKRKADWALSWISSKSA----NFGERIIAFAA 234

Query: 187 TRSLRF 192
              + F
Sbjct: 235 VEGIFF 240


>gi|89268988|emb|CAJ81953.1| ribonucleotide reductase m2 polypeptide [Xenopus (Silurana)
           tropicalis]
 gi|89269815|emb|CAJ81580.1| ribonucleotide reductase m2 polypeptide [Xenopus (Silurana)
           tropicalis]
          Length = 386

 Score =  222 bits (565), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 10/185 (5%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
               K   + D+ +L        + P++Y   W+ Y  A  + W   EV +  DL  W+S
Sbjct: 56  SKAPKDPRIQDEPLLKDNPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLRHWES 115

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              L  +E+  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  
Sbjct: 116 ---LKAEEKYFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEM 172

Query: 131 FQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILT 187
           +  +I +   D  E   LFN    +P +  KA+WAL++     S     + +R  +    
Sbjct: 173 YSLLIDTYIKDPKEREYLFNAIETLPCVKKKADWALRWI----SDKQATYGERVVAFAAV 228

Query: 188 RSLRF 192
             + F
Sbjct: 229 EGIFF 233


>gi|56118690|ref|NP_001007890.1| ribonucleotide reductase M2, gene 2 [Xenopus (Silurana) tropicalis]
 gi|51258920|gb|AAH80161.1| ribonucleotide reductase M2 polypeptide [Xenopus (Silurana)
           tropicalis]
          Length = 386

 Score =  222 bits (565), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 10/185 (5%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
               K   + D+ +L        + P++Y   W+ Y  A  + W   EV +  DL  W+S
Sbjct: 56  SKAPKDPRIQDEPLLKDNPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLRHWES 115

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              L  +E+  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  
Sbjct: 116 ---LKAEEKYFISHVLAFFAASDGIVNENLVERFSKEVQVTEARCFYGFQIAMENIHSEM 172

Query: 131 FQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILT 187
           +  +I +   D  E   LFN    +P +  KA+WAL++     +     + +R  +    
Sbjct: 173 YSLLIDTYIKDPKEREYLFNAIETLPCVKKKADWALRWIGDKQA----TYGERVVAFAAV 228

Query: 188 RSLRF 192
             + F
Sbjct: 229 EGIFF 233


>gi|121713826|ref|XP_001274524.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           clavatus NRRL 1]
 gi|119402677|gb|EAW13098.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
           clavatus NRRL 1]
          Length = 405

 Score =  221 bits (564), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 50/192 (26%), Positives = 82/192 (42%), Gaps = 13/192 (6%)

Query: 8   SPIQAGEK----RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
            P +A  K    +    ++ +L        L P+KY   W+ Y  A  + W   E+ +  
Sbjct: 55  KPTEASTKIAAIKELEANEPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSK 114

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           DL  W   N L DDER  I   L FFA+S+ +V  N++      +  PE R +   Q   
Sbjct: 115 DLHDWN--NRLNDDERYFISHVLAFFAASDGIVNENLLERFSNEVQVPEARCFYGFQIMI 172

Query: 124 EAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           E +HS T+  +I +   +  +   LF+    +P I  KA WA+++     S     + +R
Sbjct: 173 ENIHSETYSLLIDTYIKEPKQRAYLFDAIDTIPCINKKAQWAMRWISDKES----SFGQR 228

Query: 181 RRSRILTRSLRF 192
             +      + F
Sbjct: 229 LVAFAAVEGIFF 240


>gi|195333568|ref|XP_002033462.1| GM20395 [Drosophila sechellia]
 gi|195582581|ref|XP_002081105.1| GD25870 [Drosophila simulans]
 gi|194125432|gb|EDW47475.1| GM20395 [Drosophila sechellia]
 gi|194193114|gb|EDX06690.1| GD25870 [Drosophila simulans]
          Length = 393

 Score =  221 bits (564), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 10/186 (5%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           ++      +   + +L        + P++Y   W+ Y  A  + W   EV +  DL  W 
Sbjct: 62  MEKSVTPFDPSLEPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWH 121

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
               L DDER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E VHS 
Sbjct: 122 ---RLKDDERHFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSE 178

Query: 130 TFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRIL 186
            +  +I +   D  +   LFN    +P++  KA+WAL +  + S+     + +R  +   
Sbjct: 179 MYSVLIDTYIRDPHQREYLFNAIETMPAVKRKADWALSWISSKSA----NFGERIIAFAA 234

Query: 187 TRSLRF 192
              + F
Sbjct: 235 VEGIFF 240


>gi|194755279|ref|XP_001959919.1| GF11796 [Drosophila ananassae]
 gi|190621217|gb|EDV36741.1| GF11796 [Drosophila ananassae]
          Length = 393

 Score =  221 bits (564), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 10/186 (5%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           ++      +   + +L        + P++Y   W+ Y  A  + W   EV +  DL  W 
Sbjct: 62  MEKSATPFDPSLEPLLKENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWH 121

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
               L DDER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E VHS 
Sbjct: 122 ---RLKDDERHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSE 178

Query: 130 TFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRIL 186
            +  +I +   D  +   LFN    +P++  KA+WAL +  + S+     + +R  +   
Sbjct: 179 MYSVLIDTYIRDPHQREYLFNAIETMPAVKRKADWALAWISSKSA----NFGERIIAFAA 234

Query: 187 TRSLRF 192
              + F
Sbjct: 235 VEGIFF 240


>gi|301774462|ref|XP_002922647.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
           [Ailuropoda melanoleuca]
          Length = 387

 Score =  221 bits (564), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 50/185 (27%), Positives = 81/185 (43%), Gaps = 10/185 (5%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
              E     D++ +L   S    + P++Y   W+ Y  A  + W   EV +  DL  W  
Sbjct: 57  DTNENEAKSDEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHW-- 114

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            N L  DE+  I   L FFA+S+ +V  N+V    + +  PE R +   Q   E VHS  
Sbjct: 115 -NKLKSDEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEM 173

Query: 131 FQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILT 187
           +  +I +   D  +   LFN    +P +  KA+WAL++ +   S     + +R  +    
Sbjct: 174 YSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIEDRKS----TFGERVVAFAAV 229

Query: 188 RSLRF 192
             + F
Sbjct: 230 EGIFF 234


>gi|195401438|ref|XP_002059320.1| GJ18335 [Drosophila virilis]
 gi|194142326|gb|EDW58732.1| GJ18335 [Drosophila virilis]
          Length = 394

 Score =  221 bits (564), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 46/186 (24%), Positives = 82/186 (44%), Gaps = 10/186 (5%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           ++    + +   + +L        + P++Y   W+ Y  A  + W   EV +  DL  W 
Sbjct: 63  MEKIAAQFDPTVEPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWA 122

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
               LTD+ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E VHS 
Sbjct: 123 ---RLTDNERHFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSE 179

Query: 130 TFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRIL 186
            +  +I +   D  +   LFN    +P++  KA+WAL +  + ++     + +R  +   
Sbjct: 180 MYSVLIDTYIRDPHQRDYLFNAIETMPAVKRKADWALSWISSKAA----NFGERIIAFAA 235

Query: 187 TRSLRF 192
              + F
Sbjct: 236 VEGIFF 241


>gi|45184688|ref|NP_982406.1| AAL136Cp [Ashbya gossypii ATCC 10895]
 gi|44980034|gb|AAS50230.1| AAL136Cp [Ashbya gossypii ATCC 10895]
          Length = 422

 Score =  221 bits (564), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 48/182 (26%), Positives = 79/182 (43%), Gaps = 17/182 (9%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           +    ++ +L        L P+KY   W+ Y  A  + W   E+ +  D+  W   N +T
Sbjct: 91  KEQEKNEPLLMENKRRFVLFPIKYHDIWQAYKRAEASFWTAEEIDLSKDIHDWN--NRMT 148

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           ++ER  I R L FFA+S+ +V  N+V      +  PE + +   Q   E +HS T+  +I
Sbjct: 149 ENERFFISRVLAFFAASDGIVNENLVENFSAEVQIPEAKCFYGFQIMMENIHSETYSLLI 208

Query: 136 TSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
            +   D  E   LFN    +P I  KA WA+++ Q             + +    R + F
Sbjct: 209 DTYIKDPKEADHLFNAIETIPEIKEKAEWAIRWIQ------------DKDALFAERLVAF 256

Query: 193 LC 194
             
Sbjct: 257 AA 258


>gi|195119943|ref|XP_002004488.1| GI19586 [Drosophila mojavensis]
 gi|193909556|gb|EDW08423.1| GI19586 [Drosophila mojavensis]
          Length = 393

 Score =  221 bits (563), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 49/192 (25%), Positives = 82/192 (42%), Gaps = 10/192 (5%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
            T  S +       +   + +L        + P++Y   W+ Y  A  + W   EV +  
Sbjct: 56  KTEQSIMDKIAAPFDPSLEPLLKENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSK 115

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           DL  W     LTD+ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   
Sbjct: 116 DLTDWA---RLTDNERHFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAM 172

Query: 124 EAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           E VHS  +  +I +   D  E   LFN    +P++  KA+WAL +  + ++     + +R
Sbjct: 173 ENVHSEMYSVLIDTYIRDPQERDYLFNAVETMPAVKRKADWALSWISSKAA----NFGER 228

Query: 181 RRSRILTRSLRF 192
             +      + F
Sbjct: 229 IIAFAAVEGIFF 240


>gi|327261313|ref|XP_003215475.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           isoform 3 [Anolis carolinensis]
          Length = 391

 Score =  221 bits (563), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 10/175 (5%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           D+ +L        + P++Y   W+ Y  A  + W   EV +  DL  W+S   L  DE+ 
Sbjct: 71  DEPLLRDNPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWES---LKPDEKY 127

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +I +   
Sbjct: 128 FISHILAFFAASDGIVNENLVERFSQEIQVTEARCFYGFQIAMENIHSEMYSLLIDTYIK 187

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           D  E   LFN    +P +  KA+WA+++     +     + +R  +      + F
Sbjct: 188 DPKEREYLFNAIETLPCVKRKADWAMRWIGDKHA----TYGERVVAFAAVEGIFF 238


>gi|42565480|gb|AAS21007.1| ribonucleoside-diphosphate reductase R2 [Hyacinthus orientalis]
          Length = 197

 Score =  221 bits (563), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 49/179 (27%), Positives = 74/179 (41%), Gaps = 19/179 (10%)

Query: 19  VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
           V ++ +L    D   + P+KY   WE Y  A  + W   EV +  D   W+    LT DE
Sbjct: 8   VAEEPLLAPNPDRFCMFPIKYPEIWEMYKKAEASFWTAEEVDLSQDTRHWE---ALTADE 64

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           R  I   L FFA+S+ +V  N+     + +   E R +   Q   E +HS  +  ++ S 
Sbjct: 65  RHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLESY 124

Query: 139 GLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             D  E   LF+    +P +  KA WAL++     S                R + F C
Sbjct: 125 IKDPDEKNRLFHAIETIPCVAKKAEWALRWIDGGKS-------------FAQRVVAFAC 170


>gi|195436539|ref|XP_002066225.1| GK22247 [Drosophila willistoni]
 gi|194162310|gb|EDW77211.1| GK22247 [Drosophila willistoni]
          Length = 395

 Score =  221 bits (563), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 10/186 (5%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           +       +   + +L        + P++Y   W+ Y  A  + W   EV +  DL  W 
Sbjct: 64  MDKKVAHFDPSLEPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWA 123

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
               LTD+ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E VHS 
Sbjct: 124 ---RLTDNERHFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSE 180

Query: 130 TFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRIL 186
            +  +I +   D  E   LFN    +P++  KA+WAL +  + ++     + +R  +   
Sbjct: 181 MYSILIDTYIRDPQERDYLFNAVETMPAVKRKADWALSWISSKAA----NFGERIIAFAA 236

Query: 187 TRSLRF 192
              + F
Sbjct: 237 VEGIFF 242


>gi|170032272|ref|XP_001844006.1| ribonucleoside-diphosphate reductase small chain [Culex
           quinquefasciatus]
 gi|167872122|gb|EDS35505.1| ribonucleoside-diphosphate reductase small chain [Culex
           quinquefasciatus]
          Length = 391

 Score =  221 bits (563), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 45/186 (24%), Positives = 80/186 (43%), Gaps = 10/186 (5%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           ++AG+   +   + +L        + P++Y   W+ Y  A  + W   EV +  DL  W+
Sbjct: 60  LKAGQAPFDPSIEPLLKDNPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLGDWE 119

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
               L   E+  I   L FFA+S+ +V  N+V    + +   E R +   Q   E VHS 
Sbjct: 120 K---LKSGEKHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSE 176

Query: 130 TFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRIL 186
            +  +I +   D  E   LFN    +P +  KA+WA+ +  +  +     + +R  +   
Sbjct: 177 MYSLLIDTYIRDPKEREYLFNAIETLPCVKKKADWAMNWISSKHA----NFGERVVAFAA 232

Query: 187 TRSLRF 192
              + F
Sbjct: 233 VEGIFF 238


>gi|302783485|ref|XP_002973515.1| hypothetical protein SELMODRAFT_173451 [Selaginella moellendorffii]
 gi|302787555|ref|XP_002975547.1| hypothetical protein SELMODRAFT_175019 [Selaginella moellendorffii]
 gi|300156548|gb|EFJ23176.1| hypothetical protein SELMODRAFT_175019 [Selaginella moellendorffii]
 gi|300158553|gb|EFJ25175.1| hypothetical protein SELMODRAFT_173451 [Selaginella moellendorffii]
          Length = 347

 Score =  220 bits (562), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 19/188 (10%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           +  G +     ++ +L        + P++Y   WE Y  A  + W   EV +  D   W+
Sbjct: 12  VDDGSRIKAPKEEPILADNPQRFCMFPIRYPRVWEMYKKAEASFWTAEEVDLSQDAKHWE 71

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
           S   LTD+E+  +   L FFA+S+ +V  N+ +   + +  PE R +   Q   E +HS 
Sbjct: 72  S---LTDNEKHFVSHVLAFFAASDGIVLENLAVRFMKEIQIPEARAFYGFQIAIENIHSE 128

Query: 130 TFQYIITSLGLD---EGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRIL 186
            +  ++ +   D   + +LFN    +P +  KA+WAL++  +                  
Sbjct: 129 MYSLLLETYIKDNEVKAKLFNAIETIPCVAKKADWALRWIDS-------------SQSFA 175

Query: 187 TRSLRFLC 194
            R + F C
Sbjct: 176 ERIVAFAC 183


>gi|224048725|ref|XP_002196356.1| PREDICTED: ribonucleotide reductase M2 polypeptide [Taeniopygia
           guttata]
          Length = 390

 Score =  220 bits (562), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 16/201 (7%)

Query: 1   MANNTGLSPIQAGEK------RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHW 54
           +A+ T     Q G+       R   +++ +L        + P++Y   W+ Y  A  + W
Sbjct: 44  LASKTARRIFQEGDGNSVSVERPGTEEEPLLRENPRRFVIFPIQYHDIWQMYKKAEASFW 103

Query: 55  MPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECR 114
              EV +  DL  W+S   L  +E+  I   L FFA+S+ +V  N+V    + +   E R
Sbjct: 104 TAEEVDLSKDLQHWES---LKPEEKYFISHVLAFFAASDGIVNENLVERFSQEVQITEAR 160

Query: 115 QYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
            +   Q   E +HS  +  +I +   D  E   LFN    +P +  KA+WA+ +      
Sbjct: 161 CFYGFQIAMENIHSEMYSLLIDTYIKDSKEREFLFNAIETLPCVKKKADWAMCWI----G 216

Query: 172 PSFHYWNKRRRSRILTRSLRF 192
                + +R  +      + F
Sbjct: 217 DKKATYGERVVAFAAVEGIFF 237


>gi|291220709|ref|XP_002730368.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like
           [Saccoglossus kowalevskii]
          Length = 402

 Score =  220 bits (562), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 53/194 (27%), Positives = 87/194 (44%), Gaps = 13/194 (6%)

Query: 5   TGLSPIQAGEKRV---NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           T + P++  +++    N +D+ +L        + P+KY   W+ Y  A  + W   EV +
Sbjct: 63  TDVEPVKLEKRKSKPQNNEDEPLLRDNPRRFVIFPIKYHDIWQMYKKAEASFWTAEEVDL 122

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             DLA W S   L DDER  I   L FFA+S+ +V  N+V    + +   E R +   Q 
Sbjct: 123 SKDLAHWAS---LKDDERHFISHVLAFFAASDGIVNENLVERFSQEIQVTEARCFYGFQI 179

Query: 122 FEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWN 178
             E +HS  +  +I +   D  E   LFN    +P +  KA WAL +    ++     + 
Sbjct: 180 AIENIHSEMYSLLIDTYIRDPQEREYLFNAIETLPPVKRKAQWALNWINADNA----TYG 235

Query: 179 KRRRSRILTRSLRF 192
           +R  +      + F
Sbjct: 236 ERVVAFAAVEGIFF 249


>gi|170089003|ref|XP_001875724.1| ribonucleotide reductase, beta subunit [Laccaria bicolor S238N-H82]
 gi|164648984|gb|EDR13226.1| ribonucleotide reductase, beta subunit [Laccaria bicolor S238N-H82]
          Length = 422

 Score =  220 bits (562), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 49/189 (25%), Positives = 80/189 (42%), Gaps = 9/189 (4%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           L     GE  +   ++ +L        L P++Y   W+ Y  A  + W   E+ +  DL 
Sbjct: 71  LRKKFVGEVDLPESEEPLLKESKRRFVLFPIQYNEIWQMYKKAEASFWTAEEMDLSKDLH 130

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            W   N + D+ER  I   L FFA+S+ +V  N++      +   E R +   Q   E +
Sbjct: 131 DWN--NRMNDNERHFISHVLAFFAASDGIVNENLLERFSNEVQAAEARCFYGFQIMMENI 188

Query: 127 HSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           HS T+  +I S   D  +   LF+    +P I  KA WAL++     S     + +R  +
Sbjct: 189 HSETYSLLIDSYIKDPAQREYLFDAIETIPCIKRKAEWALKWISDQES----TFAERLVA 244

Query: 184 RILTRSLRF 192
                 + F
Sbjct: 245 FAAVEGIFF 253


>gi|326483608|gb|EGE07618.1| hypothetical protein TEQG_06532 [Trichophyton equinum CBS 127.97]
          Length = 317

 Score =  220 bits (562), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 49/196 (25%), Positives = 80/196 (40%), Gaps = 20/196 (10%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           A    + P      +    ++  L        L P+KY   W+ Y  A  + W   E+ +
Sbjct: 60  AETQVVKP---KTPKELEAEEPRLQENPQRFVLFPIKYREIWQMYKKAEASFWTAEEIDL 116

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D+  W   N L DDER  I   L FFA+S+ +V  N++      +  PE R +   Q 
Sbjct: 117 SKDIHDWN--NRLNDDERFFISHVLAFFAASDGIVNENLLERFSNEVQVPEARCFYGFQI 174

Query: 122 FEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWN 178
             E +HS T+  +I +   ++ +   LF     +P I  KA+WA+++ Q           
Sbjct: 175 MMENIHSETYSLLIDTYIKEQKQRTYLFEAIDTIPCIRKKADWAIRWIQ----------- 223

Query: 179 KRRRSRILTRSLRFLC 194
             + S    R + F  
Sbjct: 224 -DKNSTFSQRLVAFAA 238


>gi|49899161|gb|AAH75746.1| Ribonucleotide reductase M2 polypeptide [Danio rerio]
          Length = 386

 Score =  220 bits (562), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 49/188 (26%), Positives = 84/188 (44%), Gaps = 10/188 (5%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           S  Q+  K+  V+++ +L        + P++Y   W+ Y  A  + W   EV +  DL  
Sbjct: 53  SEGQSKAKKGAVEEEPLLKENPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQH 112

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           W   + L D+ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +H
Sbjct: 113 W---DSLKDEERYFISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIH 169

Query: 128 SHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           S  +  +I +   D  E   LFN    +P +  KA+WAL +    ++     + +R  + 
Sbjct: 170 SEMYSLLIDTYIKDSKEREFLFNAIETMPCVKKKADWALNWIGDKNA----RYGERVVAF 225

Query: 185 ILTRSLRF 192
                + F
Sbjct: 226 AAVEGIFF 233


>gi|300676950|gb|ADK26821.1| ribonucleotide reductase M2 [Zonotrichia albicollis]
          Length = 390

 Score =  220 bits (561), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 44/182 (24%), Positives = 78/182 (42%), Gaps = 10/182 (5%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
            +R   +++ +L        + P++Y   W+ Y  A  + W   EV +  DL  W+S   
Sbjct: 63  AERPGTEEEPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWES--- 119

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           L  +E+  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  
Sbjct: 120 LKPEEKYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSL 179

Query: 134 IITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSL 190
           +I +   D  E   LFN    +P +  KA+WA+ +           + +R  +      +
Sbjct: 180 LIDTYIKDSQEREFLFNAIETLPCVKKKADWAMCWI----GDKKATYGERVVAFAAVEGI 235

Query: 191 RF 192
            F
Sbjct: 236 FF 237


>gi|320164906|gb|EFW41805.1| ribonucleotide reductase m2 polypeptide [Capsaspora owczarzaki ATCC
           30864]
          Length = 352

 Score =  220 bits (561), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 52/193 (26%), Positives = 80/193 (41%), Gaps = 19/193 (9%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
           T    +  G  ++ + D+ +L        L P++Y   W+ Y  A  + W   EV +  D
Sbjct: 17  TAEEALVNGLSKLEL-DEPLLKPNPHRFVLFPIQYHDVWKMYKKAEASFWTAEEVDLSKD 75

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           L  W   + L  +ER  I   L FFA+S+ +V  N++L     +  PE R +   Q   E
Sbjct: 76  LNDW---DKLKSEERHFISHVLAFFAASDGIVNENLLLRFSTEVQIPEVRSFYCFQIAIE 132

Query: 125 AVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRR 181
            +HS  +  +I     D  E   LFN    +P +  KA WAL++               R
Sbjct: 133 NIHSEMYSLLIDMYIKDSAEREKLFNAIETLPCVAKKAQWALRWI------------SDR 180

Query: 182 RSRILTRSLRFLC 194
           RS    R + F  
Sbjct: 181 RSTFAHRLIAFAA 193


>gi|195027582|ref|XP_001986661.1| GH20400 [Drosophila grimshawi]
 gi|193902661|gb|EDW01528.1| GH20400 [Drosophila grimshawi]
          Length = 393

 Score =  220 bits (561), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 10/186 (5%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           ++      +   + +L        + P++Y   W+ Y  A  + W   EV +  D+  W 
Sbjct: 62  MEKVAAPFDPSIEPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDMTDW- 120

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
               LTD+ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E VHS 
Sbjct: 121 --VRLTDNERHFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSE 178

Query: 130 TFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRIL 186
            +  +I +   D  +   LFN    +P++  KA+WAL +  + ++     + +R  +   
Sbjct: 179 MYSVLIDTYIRDPHQRDYLFNAIETMPAVKRKADWALSWISSKAA----NFGERIIAFAA 234

Query: 187 TRSLRF 192
              + F
Sbjct: 235 VEGIFF 240


>gi|18859327|ref|NP_571525.1| ribonucleoside-diphosphate reductase subunit M2 [Danio rerio]
 gi|292624782|ref|XP_002665783.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Danio rerio]
 gi|3914657|sp|P79733|RIR2_DANRE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
           AltName: Full=Ribonucleotide reductase protein R2 class
           I; AltName: Full=Ribonucleotide reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|1695831|gb|AAB37103.1| ribonucleotide reductase protein R2 class I [Danio rerio]
 gi|27881838|gb|AAH44355.1| Ribonucleotide reductase M2 polypeptide [Danio rerio]
 gi|56207929|emb|CAI21240.1| ribonucleotide reductase M2 polypeptide [Danio rerio]
 gi|182889152|gb|AAI64707.1| Rrm2 protein [Danio rerio]
          Length = 386

 Score =  220 bits (561), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 49/188 (26%), Positives = 84/188 (44%), Gaps = 10/188 (5%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           S  Q+  K+  V+++ +L        + P++Y   W+ Y  A  + W   EV +  DL  
Sbjct: 53  SEGQSKAKKGAVEEEPLLKENPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQH 112

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           W   + L D+ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +H
Sbjct: 113 W---DSLKDEERYFISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIH 169

Query: 128 SHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           S  +  +I +   D  E   LFN    +P +  KA+WAL +    ++     + +R  + 
Sbjct: 170 SEMYSLLIDTYIKDSKEREFLFNAIETMPCVKKKADWALNWIGDKNA----RYGERVVAF 225

Query: 185 ILTRSLRF 192
                + F
Sbjct: 226 AAVEGIFF 233


>gi|194883840|ref|XP_001976005.1| GG22616 [Drosophila erecta]
 gi|190659192|gb|EDV56405.1| GG22616 [Drosophila erecta]
          Length = 393

 Score =  220 bits (561), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 10/186 (5%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           ++      +   + +L        + P++Y   W+ Y  A  + W   EV +  DL  W 
Sbjct: 62  MERSVTPFDPSLEPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWH 121

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
               L DDER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E VHS 
Sbjct: 122 ---RLKDDERHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSE 178

Query: 130 TFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRIL 186
            +  +I +   D  +   LFN    +P++  KA+WAL +  + S+     + +R  +   
Sbjct: 179 MYSVLIDTYIRDPNQREYLFNAIETMPAVKRKADWALSWISSKSA----NFGERIIAFAA 234

Query: 187 TRSLRF 192
              + F
Sbjct: 235 VEGIFF 240


>gi|289742419|gb|ADD19957.1| ribonucleotide reductase beta subunit [Glossina morsitans
           morsitans]
          Length = 396

 Score =  220 bits (561), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 49/193 (25%), Positives = 83/193 (43%), Gaps = 10/193 (5%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           + T  +       + +   + +L        + P++Y   W+ Y  A  + W   EV + 
Sbjct: 58  DATVTTASDNSVAKFDPSIEPLLKENPKRFVIFPIQYPEIWKMYKKAEASFWTAEEVDLS 117

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D+  W   N L+D ER  I   L FFA+S+ +V  N+V    + +   E R +   Q  
Sbjct: 118 KDMDDW---NRLSDGERHFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIA 174

Query: 123 EEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNK 179
            E VHS  +  +I +  +DE E   LFN    +P +  KA WAL +  + S+     + +
Sbjct: 175 MENVHSEMYSLLIETYIMDEKEREYLFNAIETMPLVKKKAEWALAWISSHSA----NFGE 230

Query: 180 RRRSRILTRSLRF 192
           R  +      + F
Sbjct: 231 RIIAFAAVEGIFF 243


>gi|320580024|gb|EFW94247.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR)
           complex [Pichia angusta DL-1]
          Length = 408

 Score =  220 bits (561), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 9/175 (5%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           D+ +L        L P+KY   W+ Y  A  + W   E+ +  DL  W   N L D+ER 
Sbjct: 81  DEPLLVENKRRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWN--NRLNDNERY 138

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            + R L FFA+S+ +V  N+V      +  PE + +   Q   E +HS T+  +I +   
Sbjct: 139 FVSRVLAFFAASDGIVNENLVENFSAEVQVPEAKCFYGFQIMMENIHSETYSLLIDTYVK 198

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           D  E   LFN    +P I  KA WA+++     +     + +R  +      + F
Sbjct: 199 DPKEAEFLFNAIETIPCIKEKAEWAMRWINDEEA----LFAERLVAFAAVEGIFF 249


>gi|225451453|ref|XP_002269951.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|147804660|emb|CAN64484.1| hypothetical protein VITISV_012640 [Vitis vinifera]
          Length = 329

 Score =  220 bits (561), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 46/177 (25%), Positives = 73/177 (41%), Gaps = 19/177 (10%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L    D   + P++Y   WE Y  A  + W   EV +  D   W++   LT DE+ 
Sbjct: 6   EEPLLAPNPDRFCMFPIQYPEVWEMYKKAEASFWTAEEVDLSQDQRQWEN---LTSDEKH 62

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I   L FFA+S+ +V  N+     + +   E R +   Q   E +HS  +  ++ S   
Sbjct: 63  FISHILAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLESYIK 122

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           D  E   LF+    +P +  KA WAL++                      R L F C
Sbjct: 123 DPKEKNRLFHAIDTIPCVAKKAQWALRWIDGSE-------------TFAERLLAFAC 166


>gi|168031987|ref|XP_001768501.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162680214|gb|EDQ66652.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 331

 Score =  220 bits (560), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 19/178 (10%)

Query: 20  DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER 79
             + +L    +   + P+KY   WE Y  A  + W   EV +  D   W++   LTDDER
Sbjct: 6   QKEPILVENPNRFTMFPIKYPQVWEMYKKAEASFWTAEEVDLSADSKHWET---LTDDER 62

Query: 80  LMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
             I   L FFA+S+ +V  N+ +   + +  PE R +   Q   E +HS  +  ++ +  
Sbjct: 63  HFISHVLAFFAASDGIVLENLAVRFMKEIQIPEARAFYGFQIAIENIHSEMYSLLLEAYI 122

Query: 140 LDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            D+ E   LFN    +P +  KA+WAL++  +                   R L F C
Sbjct: 123 KDQAEKSRLFNAIETIPCVARKADWALKWIDSA-------------GSFAERILAFAC 167


>gi|330804590|ref|XP_003290276.1| hypothetical protein DICPUDRAFT_56591 [Dictyostelium purpureum]
 gi|325079602|gb|EGC33194.1| hypothetical protein DICPUDRAFT_56591 [Dictyostelium purpureum]
          Length = 335

 Score =  220 bits (560), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 51/178 (28%), Positives = 80/178 (44%), Gaps = 10/178 (5%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
            + ++ +L    D   L P+KY   W  Y  A  + W   E+ +  DL  W SK  L D+
Sbjct: 3   QIIEEPILKENKDRFVLFPIKYPDIWSMYKQAEASFWTAEEIDLAPDLNDWSSK--LNDN 60

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           ER  I   L FFA+S+ +V  N+       +  PE R +   Q   E +HS T+  +I +
Sbjct: 61  ERHFISNVLAFFAASDGIVNENLATRFMSEVQIPEARCFYGFQIAIENIHSETYSLLIDT 120

Query: 138 LGLD---EGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
              D   + +LFN    +P I  KA+WAL++     S     + +R  +      + F
Sbjct: 121 YIKDNEQKSKLFNAIDTIPCIKKKADWALKWINNSDS-----FAERLVAFAAVEGIFF 173


>gi|241166485|ref|XP_002409876.1| ribonucleotide reductase, beta subunit, putative [Ixodes
           scapularis]
 gi|215494664|gb|EEC04305.1| ribonucleotide reductase, beta subunit, putative [Ixodes
           scapularis]
          Length = 376

 Score =  220 bits (560), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 49/180 (27%), Positives = 76/180 (42%), Gaps = 10/180 (5%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
            +   D+ +L        + P+ Y   W  Y  A  + W   EV +  DL  W   +GL 
Sbjct: 51  ELEKQDEPLLRENPRRFVMFPIVYEDIWRMYKKAEASFWTVEEVDLGKDLPHW---DGLK 107

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
            +ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E VHS  +  +I
Sbjct: 108 PEERHFISHILAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQMAIENVHSEMYSLLI 167

Query: 136 TSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
            +   D  E   LFN    +P I  KA+WAL +    S+     + +R  +      + F
Sbjct: 168 DTYIKDPSERDRLFNAVETMPCIKRKADWALNWISNRSA----TFGERIVAFAAVEGIFF 223


>gi|168049349|ref|XP_001777126.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671569|gb|EDQ58119.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 325

 Score =  219 bits (559), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 19/179 (10%)

Query: 19  VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
           ++ + +L        + P+KY   WE Y  A  + W   EV +  DL  W+    LTD+E
Sbjct: 1   MEQEPILAENPGRFCMFPIKYPQVWEMYKKAEASFWTAEEVDLSADLKHWE---ALTDNE 57

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           R  I   L FFA+S+ +V  N+ +   + +  PE R +   Q   E +HS  +  ++ + 
Sbjct: 58  RHFISHVLAFFAASDGIVLENLAVRFMKEIQIPEARAFYGFQIAIENIHSEMYSLLLEAY 117

Query: 139 GLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             D+ E   LFN    +P +T KA WAL++  +                   R L F C
Sbjct: 118 IKDQSEKHRLFNAIETIPCVTRKAEWALKWIDSS-------------GSFAERILAFAC 163


>gi|268316001|ref|YP_003289720.1| Ribonucleoside-diphosphate reductase [Rhodothermus marinus DSM
           4252]
 gi|262333535|gb|ACY47332.1| Ribonucleoside-diphosphate reductase [Rhodothermus marinus DSM
           4252]
          Length = 347

 Score =  219 bits (559), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 103/182 (56%), Positives = 136/182 (74%), Gaps = 2/182 (1%)

Query: 13  GEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSK 71
           G +R+ V+DKR++N    DVNQL+P+KY WAWE YL+ C NHWMP+E+PM  D+ LW+S 
Sbjct: 8   GSRRIRVEDKRLINCHEVDVNQLMPIKYAWAWEHYLNGCKNHWMPSEIPMARDIELWRS- 66

Query: 72  NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
           + LTDDERL+I RNLGFFA++ESLV NNIVLAI+RH++NPECRQYLLRQAFEEA+H+H F
Sbjct: 67  DKLTDDERLVILRNLGFFATAESLVGNNIVLAIFRHVTNPECRQYLLRQAFEEAIHTHAF 126

Query: 132 QYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
            YI+ SLGLDEGE+FNMYRE+P++  K  + ++ T+ +  P F           L   + 
Sbjct: 127 LYIVESLGLDEGEVFNMYREIPAVARKDEFEMELTREVLRPDFTTATVEGAQAFLKNLIG 186

Query: 192 FL 193
           + 
Sbjct: 187 YY 188


>gi|254572986|ref|XP_002493602.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR)
           complex [Pichia pastoris GS115]
 gi|238033401|emb|CAY71423.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR)
           complex [Pichia pastoris GS115]
 gi|328354568|emb|CCA40965.1| ribonucleoside-diphosphate reductase subunit M2 [Pichia pastoris
           CBS 7435]
          Length = 400

 Score =  219 bits (559), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 49/177 (27%), Positives = 76/177 (42%), Gaps = 17/177 (9%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           D+ +L        L PLKY   W+ Y  A  + W   E+ +  DL  W   N + D+E+ 
Sbjct: 75  DEPLLVENKRRFVLFPLKYHDIWQMYKQAEASFWTAEEIDLGKDLHDWN--NRMNDNEKF 132

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I R L FFA+S+ +V  N+V      +  PE + +   Q   E +HS T+  +I +   
Sbjct: 133 FISRVLAFFAASDGIVNENLVENFSAEVQLPEAKCFYGFQIMMENIHSETYSLLIDTYIK 192

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           D  E   LFN    +P I  KA+WA+++                 +    R + F  
Sbjct: 193 DPKESEFLFNAIETIPCIKEKADWAMRWI------------SDDDALFAERLVAFAA 237


>gi|328700093|ref|XP_001944536.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Acyrthosiphon pisum]
          Length = 361

 Score =  219 bits (559), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 51/195 (26%), Positives = 80/195 (41%), Gaps = 10/195 (5%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           M N      + A     +   + +L        + P+ Y   W  Y     + W   EV 
Sbjct: 18  MTNKNFFESVSAYRANFDATIEPLLKDNPRRFVIFPIIYDDIWAMYKKQEASFWNVEEVN 77

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           ++ DL  W     LTDDER  I   L FFA+S+ +V  N+V    + +   E R +   Q
Sbjct: 78  LKSDLEDW---MKLTDDERHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQ 134

Query: 121 AFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYW 177
              E +HS  +  +I +   D  E   LFN    +P +  KA+WAL++     S S   +
Sbjct: 135 IMMENIHSEMYSLLIDTYIQDPKEKDFLFNAIETMPCVKKKADWALKWI----SDSKATF 190

Query: 178 NKRRRSRILTRSLRF 192
            +R  +      + F
Sbjct: 191 GERLVAFAAVEGIFF 205


>gi|45360749|ref|NP_989048.1| ribonucleotide reductase M2, gene 1 [Xenopus (Silurana) tropicalis]
 gi|38174078|gb|AAH61353.1| ribonucleotide reductase M2 polypeptide [Xenopus (Silurana)
           tropicalis]
          Length = 378

 Score =  219 bits (559), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 10/181 (5%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + D+ +L        +LP++Y   W+ Y  A  + W   EV +  DL  W+    L
Sbjct: 52  KDPRIQDEPLLRDNPGRFVILPIEYHDIWQMYKKAEASFWTAEEVDLSKDLPHWE---AL 108

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
             +ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +
Sbjct: 109 KPEERYFISYVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLL 168

Query: 135 ITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           I +   D  E   LFN    +P +  KA WAL++     +P    + +R  +      + 
Sbjct: 169 IDTYIKDPKEREFLFNAIETLPCVKKKAEWALRWISDREAP----FCERIVAFAAVEGIF 224

Query: 192 F 192
           F
Sbjct: 225 F 225


>gi|15232077|ref|NP_189342.1| TSO2 (TSO meaning 'ugly' in Chinese); oxidoreductase/
           ribonucleoside-diphosphate reductase/ transition metal
           ion binding [Arabidopsis thaliana]
 gi|75273949|sp|Q9LSD0|RIR2C_ARATH RecName: Full=Ribonucleoside-diphosphate reductase small chain C;
           AltName: Full=Ribonucleoside-diphosphate reductase TSO2
           subunit; AltName: Full=Ribonucleotide reductase small
           subunit C
 gi|9279629|dbj|BAB01087.1| ribonucleotide reductase [Arabidopsis thaliana]
 gi|17380726|gb|AAL36193.1| putative ribonucleotide reductase small subunit [Arabidopsis
           thaliana]
 gi|21436297|gb|AAM51287.1| putative ribonucleotide reductase small subunit [Arabidopsis
           thaliana]
          Length = 332

 Score =  219 bits (559), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 45/180 (25%), Positives = 72/180 (40%), Gaps = 18/180 (10%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           ++ ++ +L    D   + P+ Y   WE Y  A  + W   EV +  D   W+  N L D 
Sbjct: 3   SMPEEPLLTPTPDRFCMFPIHYPQIWEMYKKAEASFWTAEEVDLSQDNRDWE--NSLNDG 60

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           ER  IK  L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  ++ +
Sbjct: 61  ERHFIKHVLAFFAASDGIVLENLASRFMSDVQVSEARAFYGFQIAIENIHSEMYSLLLDT 120

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
              D  E   LF     +P +  KA WA+++                      R + F C
Sbjct: 121 YIKDNKERDHLFRAIETIPCVAKKAQWAMKWI-------------DGSQTFAERIIAFAC 167


>gi|149637725|ref|XP_001508783.1| PREDICTED: similar to Ribonucleotide reductase M2 B (TP53
           inducible) [Ornithorhynchus anatinus]
          Length = 401

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 48/188 (25%), Positives = 82/188 (43%), Gaps = 13/188 (6%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
            P + G   +   ++ +L   S    + P++Y   W+ Y  A  + W   EV +  DL  
Sbjct: 71  EPTENG---LQPCEEPLLRKSSRRFVIFPIQYPEIWKMYKQAQASFWTAEEVDLSKDLPH 127

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           W   N L  +E+  I   L FFA+S+ +V  N+V    + +  PE R +   Q   E VH
Sbjct: 128 W---NKLKSEEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVH 184

Query: 128 SHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           S  +  +I +   D  +   LFN    +P +  KA+W+L++     S     + +R  + 
Sbjct: 185 SEMYSLLIDTYIKDPKKREFLFNAIETMPFVKKKADWSLRWIADRQS----TFGERVVAF 240

Query: 185 ILTRSLRF 192
                + F
Sbjct: 241 AAVEGIFF 248


>gi|297818266|ref|XP_002877016.1| hypothetical protein ARALYDRAFT_484491 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322854|gb|EFH53275.1| hypothetical protein ARALYDRAFT_484491 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 329

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 45/177 (25%), Positives = 70/177 (39%), Gaps = 18/177 (10%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L    D   + P+ Y   WE Y  A  + W   EV +  D   W+  N L D ER 
Sbjct: 3   EEPLLTPTPDRFCMFPIHYPQIWEMYKKAEASFWTAEEVDLSQDNRDWE--NNLNDGERH 60

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            IK  L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  ++ +   
Sbjct: 61  FIKHVLAFFAASDGIVLENLASRFMSDVQVSEARAFYGFQIAIENIHSEMYSLLLDTYIK 120

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           D  E   LF     +P +  KA WA+++                      R + F C
Sbjct: 121 DNKERDHLFRAIETIPCVAKKAQWAMKWI-------------DGSQTFAERIIAFAC 164


>gi|266918|sp|P07201|RIR2_SPISO RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit;
           AltName: Full=p41
 gi|10342|emb|CAA38919.1| M2 (small) subunit of ribonucleotide reductase [Spisula
           solidissima]
          Length = 384

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 10/194 (5%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
              T L        + +   + +L        +LP++Y   W+ Y  A  + W   EV +
Sbjct: 42  TQKTPLKQEIKPVVKKSQQVEPLLADNPRRFVVLPIQYHDIWKMYKKAEASFWTAEEVDL 101

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D+A W+S   L  +E+  I   L FFA+S+ +V  N+V    + +   E R +   Q 
Sbjct: 102 SKDMAHWES---LKKEEKHFISHVLAFFAASDGIVNENLVERFSKEVQVTEARCFYGFQI 158

Query: 122 FEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWN 178
             E +HS  +  +I +   D  E   LFN    +P +  KA+WA+++    SS     + 
Sbjct: 159 AMENIHSEMYSLLIDTYIKDPQERDFLFNAIETMPCVKEKADWAMRWINDDSS----SYA 214

Query: 179 KRRRSRILTRSLRF 192
           +R  +      + F
Sbjct: 215 ERVVAFAAVEGIFF 228


>gi|55742360|ref|NP_001007164.1| ribonucleoside-diphosphate reductase subunit M2 B [Danio rerio]
 gi|29561808|emb|CAD87804.1| novel protein similar to vertebrate ribonucleotide reductase M2 B
           (TP53 inducible) (RRM2B) [Danio rerio]
          Length = 349

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 55/194 (28%), Positives = 90/194 (46%), Gaps = 13/194 (6%)

Query: 5   TGLSPIQAGEKRVN---VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           T ++  Q G K V+   V+D+ +L        + P++Y   W+ Y  A  + W   EV +
Sbjct: 10  TVITGYQNGHKDVDPNSVEDEPLLRENPKRFVIFPIQYPDIWKMYKQAQASFWTVEEVDL 69

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             DL  W   +GL  +E+  I   L FFA+S+ +V  N+V    + +  PE R +   Q 
Sbjct: 70  SKDLTHW---DGLKSEEKHFISHVLAFFAASDGIVNENLVQRFSQEVQLPEARSFYGFQI 126

Query: 122 FEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWN 178
             E VHS  +  +I +   D  E   LFN  + +P +  KA+WALQ+    +S     + 
Sbjct: 127 LIENVHSEMYSMLINTYIRDLKERDYLFNAVQTMPCVRRKADWALQWISDTNS----TFG 182

Query: 179 KRRRSRILTRSLRF 192
           +R  +      + F
Sbjct: 183 ERLVAFAAVEGIFF 196


>gi|79160106|gb|AAI08038.1| Rrm2b protein [Danio rerio]
          Length = 349

 Score =  219 bits (558), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 55/194 (28%), Positives = 90/194 (46%), Gaps = 13/194 (6%)

Query: 5   TGLSPIQAGEKRVN---VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           T ++  Q G K V+   V+D+ +L        + P++Y   W+ Y  A  + W   EV +
Sbjct: 10  TVITGYQNGHKDVDPNSVEDEPLLRENPKRFVIFPIQYPDIWKMYKQAQASFWTVEEVDL 69

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             DL  W   +GL  +E+  I   L FFA+S+ +V  N+V    + +  PE R +   Q 
Sbjct: 70  SKDLTHW---DGLKSEEKHFISHVLAFFAASDGIVNENLVQRFSQEVQLPEARSFYGFQI 126

Query: 122 FEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWN 178
             E VHS  +  +I +   D  E   LFN  + +P +  KA+WALQ+    +S     + 
Sbjct: 127 LIENVHSEMYSMLINTYIRDLKERDYLFNAVQTMPCVRRKADWALQWISDTNS----TFG 182

Query: 179 KRRRSRILTRSLRF 192
           +R  +      + F
Sbjct: 183 ERLVAFAAVEGIFF 196


>gi|296809816|ref|XP_002845246.1| ribonucleotide reductase [Arthroderma otae CBS 113480]
 gi|238842634|gb|EEQ32296.1| ribonucleotide reductase [Arthroderma otae CBS 113480]
          Length = 405

 Score =  218 bits (557), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 48/188 (25%), Positives = 80/188 (42%), Gaps = 20/188 (10%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           ++A   +    ++ +L        L P+KY    E Y  A  + W   E+ +  D+  W 
Sbjct: 65  VKAKTPKELEAEEPLLQENPQRFVLFPIKYH---EMYKKAEASFWTAEEIDLSKDIHDWN 121

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
             N L DDER  I   L FFA+S+ +V  N++      +  PE R +   Q   E +HS 
Sbjct: 122 --NRLNDDERFFISHVLAFFAASDGIVNENLLERFSGEVQVPEARCFYGFQIMMENIHSE 179

Query: 130 TFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRIL 186
           T+  +I +   ++ +   LF     +P I  KA+WA+++ Q             + S   
Sbjct: 180 TYSLLIDTYIKEQKQRTYLFEAIDTIPCIRKKADWAIRWIQ------------DKDSTFA 227

Query: 187 TRSLRFLC 194
            R + F  
Sbjct: 228 QRLVAFAA 235


>gi|283779060|ref|YP_003369815.1| ribonucleoside-diphosphate reductase [Pirellula staleyi DSM 6068]
 gi|283437513|gb|ADB15955.1| Ribonucleoside-diphosphate reductase [Pirellula staleyi DSM 6068]
          Length = 357

 Score =  218 bits (557), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 97/176 (55%), Positives = 130/176 (73%), Gaps = 2/176 (1%)

Query: 19  VDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
            ++KR++N  + DVNQL+P+KY WAWE Y + C NHWMP+EVPM  D+  W++   LTDD
Sbjct: 25  AEEKRLINCSTVDVNQLMPIKYHWAWEHYQNGCANHWMPSEVPMGKDIETWRT-GSLTDD 83

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+L+I RNLGFF+++ESLV NN+VLAI+RH++NPECRQYLLRQAFEEA+H+HTF YI+ S
Sbjct: 84  EKLVILRNLGFFSTAESLVGNNLVLAIFRHVTNPECRQYLLRQAFEEAIHTHTFLYIVES 143

Query: 138 LGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           LGLD+ E+FNMYRE+PSI  K  + +Q T  L  P+F         + L   + + 
Sbjct: 144 LGLDDREVFNMYREIPSIARKDAFEMQLTTGLLDPNFTTETAEGAQKFLENLIGYY 199


>gi|73974202|ref|XP_858105.1| PREDICTED: similar to ribonucleotide reductase M2 B (TP53
           inducible) isoform 4 [Canis familiaris]
          Length = 374

 Score =  218 bits (557), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 51/185 (27%), Positives = 82/185 (44%), Gaps = 10/185 (5%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
              E  V  D++ +L   S    + P++Y   W+ Y  A  + W   EV +  DL  W  
Sbjct: 21  DTNENEVKSDEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHW-- 78

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            N L  DE+  I   L FFA+S+ +V  N+V    + +  PE R +   Q   E VHS  
Sbjct: 79  -NKLKSDEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEM 137

Query: 131 FQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILT 187
           +  +I +   D  +   LFN    +P +  KA+WAL++ +   S     + +R  +    
Sbjct: 138 YSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIEDRKS----TFGERVVAFAAV 193

Query: 188 RSLRF 192
             + F
Sbjct: 194 EGIFF 198


>gi|157126966|ref|XP_001654749.1| ribonucleoside-diphosphate reductase small chain [Aedes aegypti]
 gi|15638625|gb|AAL05057.1|AF411297_1 ribonucleotide reductase 2 [Aedes aegypti]
 gi|82469974|gb|ABB77235.1| ribonucleotide reductase small subunit R2 [Aedes aegypti]
 gi|108873070|gb|EAT37295.1| ribonucleoside-diphosphate reductase small chain [Aedes aegypti]
          Length = 397

 Score =  218 bits (557), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 47/195 (24%), Positives = 82/195 (42%), Gaps = 10/195 (5%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +A N   +  +  +   +   + +L        + P++Y   W+ Y  A  + W   EV 
Sbjct: 57  LAKNELSAAQKREQTPFDPSIEPLLKENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVD 116

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           +  DLA W+    L   E+  I   L FFA+S+ +V  N+V    + +   E R +   Q
Sbjct: 117 LSKDLADWEK---LKSGEKHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQ 173

Query: 121 AFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYW 177
              E VHS  +  +I +   D  E   LFN    +P +  KA+WAL +  +  +     +
Sbjct: 174 IAMENVHSEMYSLLIDTYIRDSKEREYLFNAIDNLPCVKKKADWALNWISSKKA----NF 229

Query: 178 NKRRRSRILTRSLRF 192
            +R  +      + F
Sbjct: 230 GERVVAFAAVEGIFF 244


>gi|327269406|ref|XP_003219485.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
           [Anolis carolinensis]
          Length = 414

 Score =  218 bits (556), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 46/182 (25%), Positives = 79/182 (43%), Gaps = 10/182 (5%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           E  +  +++ +L        + P+ Y   W+ Y  A  + W   EV +  D   W   N 
Sbjct: 87  ENGLKSNEEPLLRKNPRRFVIFPIHYPDIWKMYKKAQASFWTAEEVDLSKDFPHW---NK 143

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           L  +E+  I   L FFA+S+ +V  N+V    + +  PE R +   Q   E VHS  +  
Sbjct: 144 LKSEEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSL 203

Query: 134 IITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSL 190
           +I +   D  E   LFN    +P +  KA+WAL++ +   +     + +R  +      +
Sbjct: 204 LIDTYIKDPEERDFLFNAIETMPCVKKKADWALRWIRDRKA----TFGERVVAFASVEGI 259

Query: 191 RF 192
            F
Sbjct: 260 FF 261


>gi|41054952|ref|NP_955770.1| ribonucleoside-diphosphate reductase subunit M2 B [Mus musculus]
 gi|81885688|sp|Q6PEE3|RIR2B_MOUSE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B;
           AltName: Full=TP53-inducible ribonucleotide reductase M2
           B; AltName: Full=p53-inducible ribonucleotide reductase
           small subunit 2-like protein; Short=p53R2
 gi|34786000|gb|AAH58103.1| Ribonucleotide reductase M2 B (TP53 inducible) [Mus musculus]
 gi|74218244|dbj|BAE23760.1| unnamed protein product [Mus musculus]
          Length = 351

 Score =  218 bits (556), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 50/185 (27%), Positives = 81/185 (43%), Gaps = 10/185 (5%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
           +  E  V  +++ +L   S    + P++Y   W  Y  A  + W   EV +  DL  W  
Sbjct: 21  ETEENVVRSNEEPLLRKSSRRFVIFPIQYPDIWRMYKQAQASFWTAEEVDLSKDLPHW-- 78

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            N L  DE+  I   L FFA+S+ +V  N+V    + +  PE R +   Q   E VHS  
Sbjct: 79  -NKLKSDEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEM 137

Query: 131 FQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILT 187
           +  +I +   D  +   LFN    +P +  KA+WAL++     S     + +R  +    
Sbjct: 138 YSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKS----TFGERVVAFAAV 193

Query: 188 RSLRF 192
             + F
Sbjct: 194 EGIFF 198


>gi|291388369|ref|XP_002710634.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like
           [Oryctolagus cuniculus]
          Length = 339

 Score =  218 bits (556), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 10/181 (5%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
              N D++ +L   S    + P++Y   W+ Y  A  + W   EV +  DL  W   N L
Sbjct: 13  PDTNEDEEPLLKKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHW---NRL 69

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           T DE+  I   L FFA+S+ +V  N+V    + +  PE R +   Q   E VHS  +  +
Sbjct: 70  TSDEKYFISHVLAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLL 129

Query: 135 ITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           I +   D  +   LFN    +P +  KA+WAL++     S     + +R  +      + 
Sbjct: 130 IDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKS----TFGERVVAFAAVEGIF 185

Query: 192 F 192
           F
Sbjct: 186 F 186


>gi|10432587|dbj|BAB13815.1| ribonucleotide reductase small subunit [Lentinula edodes]
          Length = 418

 Score =  218 bits (555), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 51/191 (26%), Positives = 80/191 (41%), Gaps = 9/191 (4%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
             L     GE  +   ++ +L        L P++Y   W+ Y  A  + W   E+ +  D
Sbjct: 75  AALQKRFVGEVELPESEEPLLLESRRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKD 134

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           L  W   N L D ER  I R L FFA+S+ +V  N++      +   E R +   Q   E
Sbjct: 135 LHDWN--NRLNDSERFFISRVLAFFAASDGIVNENLLERFSNEVQVAEARCFYGFQIMME 192

Query: 125 AVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRR 181
            +HS T+  +I +   D  E   LF+    +P I  KA WAL++     S     + +R 
Sbjct: 193 NIHSETYSLLIDTYIKDPVERDFLFDAIETIPCIKRKAEWALRWISDEHS----VFGERL 248

Query: 182 RSRILTRSLRF 192
            +      + F
Sbjct: 249 VAFAAVEGIFF 259


>gi|72008642|ref|XP_780110.1| PREDICTED: similar to ribonucleotide reductase protein R2 class I
           isoform 1 [Strongylocentrotus purpuratus]
 gi|115928579|ref|XP_001179668.1| PREDICTED: similar to ribonucleotide reductase protein R2 class I
           [Strongylocentrotus purpuratus]
          Length = 412

 Score =  218 bits (555), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 12/196 (6%)

Query: 2   ANNTGLSPIQAGEKRV--NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEV 59
           A +  + P  +G+K V  N +D+ +L   +    + P++Y   W+ Y  A  + W   EV
Sbjct: 66  AKSKLVKPENSGKKVVSFNKEDEPLLRENARRFVIFPIQYHDIWQFYKKAEASFWTAEEV 125

Query: 60  PMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLR 119
            +  DL  W +   L D+ER  I   L FFA+S+ +V  N+V    + +   E R +   
Sbjct: 126 DLSKDLDHWAN---LKDEERHFISHVLAFFAASDGIVNENLVERFSQEVQVAEARCFYGF 182

Query: 120 QAFEEAVHSHTFQYIITSLGLD---EGELFNMYREVPSITAKANWALQYTQTLSSPSFHY 176
           Q   E +HS  +  +I +   D      LFN    +P +T KA WAL +  + S+     
Sbjct: 183 QIAIENIHSEMYSLLIDTYIKDSVQRDFLFNAVETLPCVTKKAQWALNWIGSDSAD---- 238

Query: 177 WNKRRRSRILTRSLRF 192
           +  R  +      + F
Sbjct: 239 FGTRIVAFAAVEGIFF 254


>gi|164659270|ref|XP_001730759.1| hypothetical protein MGL_1758 [Malassezia globosa CBS 7966]
 gi|159104657|gb|EDP43545.1| hypothetical protein MGL_1758 [Malassezia globosa CBS 7966]
          Length = 397

 Score =  218 bits (555), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 48/187 (25%), Positives = 78/187 (41%), Gaps = 17/187 (9%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
             GE  +  +++ +L        L P++Y   W+ Y  A  + W   E+ +  DL  W  
Sbjct: 60  FVGEVDLPEEEEPILKENKGRFVLFPIRYHEIWQMYKKAEASFWTAEEIDLSKDLYDWD- 118

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            N +TD ER  +   L FFA+S+ +V  N+V      +   E R +   Q   E +HS T
Sbjct: 119 -NRMTDPERHFVSHVLAFFAASDGIVNENLVERFSAEVQATEARCFYGFQIMMENIHSET 177

Query: 131 FQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILT 187
           +  +I +   +      LFN    VP +  KA+WAL++                R+    
Sbjct: 178 YSLLIDTYIREPERRDFLFNAIETVPVVKQKADWALRWI------------SDHRASFSE 225

Query: 188 RSLRFLC 194
           R + F  
Sbjct: 226 RLVAFAA 232


>gi|158286793|ref|XP_308927.4| AGAP006818-PA [Anopheles gambiae str. PEST]
 gi|157020637|gb|EAA04227.4| AGAP006818-PA [Anopheles gambiae str. PEST]
          Length = 400

 Score =  218 bits (555), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 44/183 (24%), Positives = 76/183 (41%), Gaps = 10/183 (5%)

Query: 13  GEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
                +   + +L        + P++Y   W+ Y  A  + W   EV +  D+  W++  
Sbjct: 72  ESAPFDPSIEPLLRDNPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDMKDWET-- 129

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
            L   ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E VHS  + 
Sbjct: 130 -LKPSERHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYS 188

Query: 133 YIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRS 189
            +I +   D  E   LFN    +P +  KA+WAL +  +  +     + +R  +      
Sbjct: 189 LLIDTYIRDSKEREFLFNAIETLPCVKRKADWALNWISSKKA----NFGERVVAFAAVEG 244

Query: 190 LRF 192
           + F
Sbjct: 245 IFF 247


>gi|126322530|ref|XP_001380256.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 361

 Score =  218 bits (555), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 10/179 (5%)

Query: 17  VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           +   ++ +L   S    + P++Y   W+ Y  A  + W   EV +  DL  W   N L  
Sbjct: 37  LKSSEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHW---NKLKS 93

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
           DE+  I   L FFA+S+ +V  N+V    + +  PE R +   Q   E +HS  +  +I 
Sbjct: 94  DEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENIHSEMYSLLID 153

Query: 137 SLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           +   D  +   LFN    +P +  KA+WALQ+     S     + +R  +      + F
Sbjct: 154 TYIKDPQKREFLFNAIETMPCVKRKADWALQWIADRKS----TFGERVVAFAAVEGIFF 208


>gi|73974198|ref|XP_539109.2| PREDICTED: similar to ribonucleotide reductase M2 B (TP53
           inducible) isoform 2 [Canis familiaris]
          Length = 351

 Score =  217 bits (554), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 51/185 (27%), Positives = 82/185 (44%), Gaps = 10/185 (5%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
              E  V  D++ +L   S    + P++Y   W+ Y  A  + W   EV +  DL  W  
Sbjct: 21  DTNENEVKSDEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHW-- 78

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            N L  DE+  I   L FFA+S+ +V  N+V    + +  PE R +   Q   E VHS  
Sbjct: 79  -NKLKSDEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEM 137

Query: 131 FQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILT 187
           +  +I +   D  +   LFN    +P +  KA+WAL++ +   S     + +R  +    
Sbjct: 138 YSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIEDRKS----TFGERVVAFAAV 193

Query: 188 RSLRF 192
             + F
Sbjct: 194 EGIFF 198


>gi|269839640|ref|YP_003324332.1| ribonucleoside-diphosphate reductase [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269791370|gb|ACZ43510.1| Ribonucleoside-diphosphate reductase [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 353

 Score =  217 bits (554), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 102/180 (56%), Positives = 129/180 (71%), Gaps = 2/180 (1%)

Query: 15  KRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           +R+ V+DKR++N ++ DVNQL PLKY WAWE YL+ C NHWMPTEVPM  D+ LW+S N 
Sbjct: 17  QRIRVEDKRLINCKAVDVNQLWPLKYAWAWEHYLNGCANHWMPTEVPMHKDIELWRS-NA 75

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           LT DERL+I RNLGFF++ ESLV NNIVLAI++H++NPE RQYLLRQAFEEA+H+H F Y
Sbjct: 76  LTPDERLVIMRNLGFFSTGESLVGNNIVLAIFKHITNPEARQYLLRQAFEEAIHTHAFHY 135

Query: 134 IITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           I+ SLGLD  E+FNMYREV SI  K  + +  T+ +  P F           +   + F 
Sbjct: 136 IVESLGLDGREVFNMYREVDSIKGKDEFVMSLTERVLDPDFTTETLEGIQDFIRNLVGFY 195


>gi|328855581|gb|EGG04707.1| hypothetical protein MELLADRAFT_49061 [Melampsora larici-populina
           98AG31]
          Length = 385

 Score =  217 bits (554), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 9/175 (5%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L        L P+KY   W  Y  A  + W   E+ +  D+  W+  N L DDE+ 
Sbjct: 52  EEPLLKEDGHRFVLFPIKYHEIWASYKRAEASFWTAEEIDLSKDMHDWE--NRLNDDEKH 109

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            IK  L FFA+S+ +V  N++      +   E R +   Q   E +HS  +  +I +   
Sbjct: 110 FIKHVLAFFAASDGIVNENLIERFSGEVQAAEARCFYGFQIMMENIHSEVYSLLIDTYVR 169

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           +  E   LF+    +P I  KA+WAL++     S     + +R  +      + F
Sbjct: 170 EPIERSHLFDAIDTIPCIRKKADWALKWISDKQS----TFGERLIAFAAVEGIFF 220


>gi|929959|gb|AAA74020.1| ribonuleotide reductase small subunit [Urechis caupo]
          Length = 399

 Score =  217 bits (554), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 10/176 (5%)

Query: 20  DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER 79
           +++ +L        + P++Y   W+ Y  A  + W   EV +  D++ W+    L  +E+
Sbjct: 75  EEEPLLRDNPRRFVVFPIQYNDIWQMYKKAEASFWTAEEVDLSKDISDWEK---LKSEEK 131

Query: 80  LMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
             +   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +I +  
Sbjct: 132 HFVSHVLAFFAASDGIVNENLVERFSKEVQVTEARCFYGYQIAVENIHSEMYSLLIDTYV 191

Query: 140 LDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
            D  E   LFN    +P +  KA+WAL++     S     + +R  +      + F
Sbjct: 192 KDPTERDFLFNAIETMPCVKEKADWALRWINDEQS----SFGERVVAFAAVEGIFF 243


>gi|187607401|ref|NP_001119973.1| ribonucleotide reductase M2 B (TP53 inducible) [Xenopus (Silurana)
           tropicalis]
 gi|165971068|gb|AAI58191.1| LOC100144925 protein [Xenopus (Silurana) tropicalis]
          Length = 346

 Score =  217 bits (554), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 13/191 (6%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
           TG   +  G      +++  L        + P+ Y   W+ Y  A  + W   EV +  D
Sbjct: 13  TGDKNLTNGHSD---EEEPFLRKNPQRFVIFPIHYPDIWKMYKKAQASFWTAEEVDLSKD 69

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           L  W+    L  +ER  I   L FFA+S+ +V  N+V    + +  PE R +   Q   E
Sbjct: 70  LVHWEK---LKPEERNFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIE 126

Query: 125 AVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRR 181
            VHS  +  +I +   D      LFN    +P +  KA WAL++     S     + +R 
Sbjct: 127 NVHSEMYSLLIETYIKDPRRREFLFNAIETMPCVRKKAQWALRWI----SDRKASFGERV 182

Query: 182 RSRILTRSLRF 192
            +      + F
Sbjct: 183 VAFAAVEGIFF 193


>gi|194319980|pdb|2VUX|A Chain A, Human Ribonucleotide Reductase, Subunit M2 B
 gi|194319981|pdb|2VUX|B Chain B, Human Ribonucleotide Reductase, Subunit M2 B
          Length = 326

 Score =  217 bits (553), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 49/185 (26%), Positives = 81/185 (43%), Gaps = 10/185 (5%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
              E  +  +++ +L   S    + P++Y   W+ Y  A  + W   EV +  DL  W  
Sbjct: 25  DTNESEIKSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHW-- 82

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            N L  DE+  I   L FFA+S+ +V  N+V    + +  PE R +   Q   E VHS  
Sbjct: 83  -NKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEM 141

Query: 131 FQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILT 187
           +  +I +   D  +   LFN    +P +  KA+WAL++     S     + +R  +    
Sbjct: 142 YSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKS----TFGERVVAFAAV 197

Query: 188 RSLRF 192
             + F
Sbjct: 198 EGVFF 202


>gi|159465291|ref|XP_001690856.1| ribonucleoside-diphosphate reductase small subunit [Chlamydomonas
           reinhardtii]
 gi|158279542|gb|EDP05302.1| ribonucleoside-diphosphate reductase small subunit [Chlamydomonas
           reinhardtii]
          Length = 493

 Score =  217 bits (553), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 47/195 (24%), Positives = 75/195 (38%), Gaps = 19/195 (9%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
                 P      R  + D+ +L    +   L P+KY   WE Y     + W   EV   
Sbjct: 148 PAEVAEPSAEVASRSTLLDEDLLRENPNRFTLFPIKYPDLWEFYKQGVASFWTVEEVDFT 207

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            DL  W     L  +E+  IK  L FFA+S+ +V  N+       +  PE R +   Q  
Sbjct: 208 GDLIDWH---RLKPEEQRFIKYVLAFFAASDGIVMENLAARFMSDIQVPEARAFYGFQIA 264

Query: 123 EEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNK 179
            E VHS  +  ++     +  E   LF+    +P++  KA WA+++  + +         
Sbjct: 265 MENVHSEMYSVLLDHYVREPEERNQLFDAIHTIPTVAKKAEWAMRWISSSNV-------- 316

Query: 180 RRRSRILTRSLRFLC 194
                   R + F C
Sbjct: 317 -----FAERLVGFAC 326


>gi|328771482|gb|EGF81522.1| hypothetical protein BATDEDRAFT_16297 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 336

 Score =  217 bits (553), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 54/187 (28%), Positives = 85/187 (45%), Gaps = 9/187 (4%)

Query: 9   PIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           P++   +   V ++ +L      + L P+KY   W  Y  A  + W   EV +  D   W
Sbjct: 2   PLELPSESTLVQNEPILTPDPRRSVLFPIKYPAVWRMYKKAEASFWTAEEVDLSKDTLDW 61

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           + +  LTDDER  I R L FFA+S+ +V  N+V    + +  PE R +   Q   E +HS
Sbjct: 62  EER--LTDDERYFISRVLAFFAASDGIVNENLVERFSQDVHIPEARYFYDFQIMIENIHS 119

Query: 129 HTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRI 185
             +  +I +   D  E   LF+    VP I  KA+WAL++     S     + +R  +  
Sbjct: 120 EMYSLLIDTYIKDRKERAFLFDAIDTVPCIRKKADWALRWI----SDKKSSFGERLVAFA 175

Query: 186 LTRSLRF 192
               + F
Sbjct: 176 AVEGIFF 182


>gi|20178418|ref|NP_619839.1| CPXV051 protein [Cowpox virus]
 gi|20153036|gb|AAM13497.1|AF482758_48 CPXV051 protein [Cowpox virus]
          Length = 333

 Score =  217 bits (553), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 46/179 (25%), Positives = 78/179 (43%), Gaps = 11/179 (6%)

Query: 17  VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           VN+  + +L    +   + P++Y   W  Y  A  + W   EV +  D+  W   N LT 
Sbjct: 11  VNLVMEPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTP 67

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
           +E+  IK  L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  +I 
Sbjct: 68  NEKHFIKHVLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLID 127

Query: 137 SLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           +   D  E   LFN    +P +  KA+WA ++    +S     + +R  +      + F
Sbjct: 128 TYVKDSNEKNYLFNAIETMPCVKKKADWAQKWIHDSAS-----YGERLVAFAAVEGIFF 181


>gi|7023557|dbj|BAA92005.1| unnamed protein product [Homo sapiens]
          Length = 351

 Score =  217 bits (553), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 10/193 (5%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           +    S     E  +  +++ +L   S    + P++Y   W+ Y  A  + W   EV + 
Sbjct: 13  DQDERSSSDTNESEIKSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLS 72

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            DL  W   N L  DE+  I   L FFA+S+ +V  N+V    + +  PE R +   Q  
Sbjct: 73  KDLPHW---NKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQIL 129

Query: 123 EEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNK 179
            E VHS  +  +I +   D  +   LFN    +P +  KA+WAL++     S     + +
Sbjct: 130 IENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKS----TFGE 185

Query: 180 RRRSRILTRSLRF 192
           R  +      + F
Sbjct: 186 RVVAFAAVEGVFF 198


>gi|255530602|ref|YP_003090974.1| Ribonucleoside-diphosphate reductase [Pedobacter heparinus DSM
           2366]
 gi|255343586|gb|ACU02912.1| Ribonucleoside-diphosphate reductase [Pedobacter heparinus DSM
           2366]
          Length = 324

 Score =  217 bits (553), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 48/178 (26%), Positives = 75/178 (42%), Gaps = 20/178 (11%)

Query: 20  DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER 79
           +++ +L    D   LLP+KY   WE Y  +  + W   E+ + DD   W   + L D ER
Sbjct: 3   EEEVLLKENKDRFVLLPIKYPEIWEMYKKSEASFWTAEEIDLSDDQKHW---DNLNDGER 59

Query: 80  LMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
             I   L FF++S+ +V  N+ +     +  PE R +   Q   E +HS T+  +I +  
Sbjct: 60  HFISHILAFFSASDGIVNENLAVNFMSEVQLPEARCFYGFQIMMENIHSETYALLIDTYI 119

Query: 140 LDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            D  E   LF+    VP +  KA WAL++                      R + F  
Sbjct: 120 KDPDEKDRLFHAIETVPCVKKKAEWALRWID--------------NGSFAERLVAFAA 163


>gi|194474072|ref|NP_001124015.1| ribonucleoside-diphosphate reductase subunit M2 B [Rattus
           norvegicus]
 gi|149066498|gb|EDM16371.1| ribonucleotide reductase M2 B (TP53 inducible) (predicted) [Rattus
           norvegicus]
          Length = 351

 Score =  217 bits (553), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 10/185 (5%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
           +  E  V  +++ +L   S    + P++Y   W+ Y  A  + W   EV +  DL  W  
Sbjct: 21  ETKENEVRSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHW-- 78

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            N L  +E+  I   L FFA+S+ +V  N+V    + +  PE R +   Q   E VHS  
Sbjct: 79  -NKLKSEEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEM 137

Query: 131 FQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILT 187
           +  +I +   D  +   LFN    +P +  KA+WAL++     S     + +R  +    
Sbjct: 138 YSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKS----TFGERVVAFAAV 193

Query: 188 RSLRF 192
             + F
Sbjct: 194 EGIFF 198


>gi|77748199|gb|AAI06683.1| MGC78958 protein [Xenopus laevis]
          Length = 406

 Score =  217 bits (553), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 47/181 (25%), Positives = 80/181 (44%), Gaps = 10/181 (5%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + D+ +L        +LP++Y   W+ Y  A  + W   EV +  DL  W++   L
Sbjct: 80  KDPLIQDEPLLRDNPGRFVILPIEYHDIWQMYKKAEASFWTAEEVDLSKDLQHWET---L 136

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
             +ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +
Sbjct: 137 KPEERYFISYVLAFFAASDGIVNENLVERFSQEVQVTEVRCFYGFQIAMENIHSEMYSLL 196

Query: 135 ITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           I +   D  E   LFN    +P +  KA W+L++     +P    + +R  +      + 
Sbjct: 197 IDTYIKDPKEREFLFNAIETLPCVKKKAEWSLRWISDREAP----YCERLVAFAAVEGIF 252

Query: 192 F 192
           F
Sbjct: 253 F 253


>gi|66822029|ref|XP_644369.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
           AX4]
 gi|66823381|ref|XP_645045.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
           AX4]
 gi|41019487|sp|P42521|RIR2_DICDI RecName: Full=Ribonucleoside-diphosphate reductase small subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|29611978|gb|AAB72227.2| ribonucleotide reductase small subunit [Dictyostelium discoideum]
 gi|60472492|gb|EAL70444.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
           AX4]
 gi|60472997|gb|EAL70945.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
           AX4]
          Length = 338

 Score =  217 bits (553), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 51/174 (29%), Positives = 80/174 (45%), Gaps = 10/174 (5%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    D   L P+KY   W  Y  A  +HW+  E+ + +D   W+ K  LTD+ER  
Sbjct: 12  EPILKENKDRFVLFPIKYPDIWRMYKKALASHWVAEEIDLGNDNVDWEYK--LTDNERHF 69

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           I   L FFA+S+ +V  N+       +  PE R +   Q   E +HS T+  +I +   D
Sbjct: 70  ISHVLAFFAASDGIVNENLATRFMSEVQIPEARCFYGFQIAIENIHSETYSLLIETYIKD 129

Query: 142 ---EGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
              + +LFN    +P I  KA WAL++     S     + +R  +      + F
Sbjct: 130 KQTKDKLFNAIETIPCIKKKAEWALRWINDSDS-----FAERLVAFAAVEGIFF 178


>gi|302696699|ref|XP_003038028.1| hypothetical protein SCHCODRAFT_12788 [Schizophyllum commune H4-8]
 gi|300111725|gb|EFJ03126.1| hypothetical protein SCHCODRAFT_12788 [Schizophyllum commune H4-8]
          Length = 377

 Score =  217 bits (553), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 50/190 (26%), Positives = 82/190 (43%), Gaps = 9/190 (4%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
            L+   +    +  +D+ +L        L P++Y   W  Y  A  + W   E+ +  D+
Sbjct: 46  SLAGAASETVLIRAEDEPLLRESQRRFVLFPIQYDDIWAMYKQAQASFWTSEEITLAYDM 105

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             W  +  L D+ER  IK  L FFA+S+ +V  N+V      +   E R +   Q   E 
Sbjct: 106 RDWTER--LDDNERNFIKHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMEN 163

Query: 126 VHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRR 182
           +HS T+  +I +   D  E   LF     +P I  KA+WAL++    SS     + +R  
Sbjct: 164 IHSETYSLLIDTYIKDPQERDHLFAAIETIPCIKRKADWALRWISDKSS----TFAERLV 219

Query: 183 SRILTRSLRF 192
           +      + F
Sbjct: 220 AFAAVEGIFF 229


>gi|42544136|ref|NP_056528.2| ribonucleoside-diphosphate reductase subunit M2 B isoform 1 [Homo
           sapiens]
 gi|114621161|ref|XP_001153916.1| PREDICTED: ribonucleotide reductase M2 B (TP53 inducible) isoform 2
           [Pan troglodytes]
 gi|74727333|sp|Q7LG56|RIR2B_HUMAN RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B;
           AltName: Full=TP53-inducible ribonucleotide reductase M2
           B; AltName: Full=p53-inducible ribonucleotide reductase
           small subunit 2-like protein; Short=p53R2
 gi|261278726|pdb|3HF1|A Chain A, Crystal Structure Of Human P53r2
 gi|261278727|pdb|3HF1|B Chain B, Crystal Structure Of Human P53r2
 gi|7229086|dbj|BAA92434.1| ribonucleotide reductase [Homo sapiens]
 gi|7229115|dbj|BAA92493.1| ribonucleotide reductase [Homo sapiens]
 gi|45259569|dbj|BAD12267.1| p53-inducible ribonucleotide reductase small subunit 2 [Homo
           sapiens]
 gi|52545612|emb|CAB70703.2| hypothetical protein [Homo sapiens]
 gi|63055293|gb|AAY29059.1| ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
 gi|80473666|gb|AAI08262.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
 gi|109659128|gb|AAI17497.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
 gi|119612247|gb|EAW91841.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_b [Homo
           sapiens]
 gi|120660296|gb|AAI30629.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
 gi|190689549|gb|ACE86549.1| ribonucleotide reductase M2 B (TP53 inducible) protein [synthetic
           construct]
 gi|190690911|gb|ACE87230.1| ribonucleotide reductase M2 B (TP53 inducible) protein [synthetic
           construct]
 gi|261859014|dbj|BAI46029.1| ribonucleotide reductase M2 B [synthetic construct]
 gi|313882916|gb|ADR82944.1| ribonucleotide reductase M2 B (TP53 inducible) [synthetic
           construct]
          Length = 351

 Score =  217 bits (552), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 10/193 (5%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           +    S     E  +  +++ +L   S    + P++Y   W+ Y  A  + W   EV + 
Sbjct: 13  DQDERSSSDTNESEIKSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLS 72

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            DL  W   N L  DE+  I   L FFA+S+ +V  N+V    + +  PE R +   Q  
Sbjct: 73  KDLPHW---NKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQIL 129

Query: 123 EEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNK 179
            E VHS  +  +I +   D  +   LFN    +P +  KA+WAL++     S     + +
Sbjct: 130 IENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKS----TFGE 185

Query: 180 RRRSRILTRSLRF 192
           R  +      + F
Sbjct: 186 RVVAFAAVEGVFF 198


>gi|297805560|ref|XP_002870664.1| ribonucleoside-diphosphate reductase [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316500|gb|EFH46923.1| ribonucleoside-diphosphate reductase [Arabidopsis lyrata subsp.
           lyrata]
          Length = 333

 Score =  217 bits (552), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 18/180 (10%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           ++ ++ +L    D   + P++Y   WE Y  A  + W   EV +  D   W+  N L++D
Sbjct: 3   SMPEEPILTPTPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWE--NSLSND 60

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           ER  IK  L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  ++ +
Sbjct: 61  ERHFIKHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSEMYSLLLDT 120

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
              D  E   LF     +P +T KA WA+++                      R + F C
Sbjct: 121 YIKDNKERDHLFRAIETIPCVTKKAEWAMKWING-------------SQSFAERIVAFAC 167


>gi|168015485|ref|XP_001760281.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162688661|gb|EDQ75037.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 330

 Score =  217 bits (552), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 19/178 (10%)

Query: 20  DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER 79
            ++ +L    +   + P+KY   WE Y  A  + W   EV +  D   W+    LTD+ER
Sbjct: 5   QEEPILMENPNRFTMFPIKYPQVWEMYKKAEASFWTAEEVDLSADSKHWE---ALTDNER 61

Query: 80  LMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
             I   L FFA+S+ +V  N+ +   + +  PE R +   Q   E +HS  +  ++ +  
Sbjct: 62  HFISHVLAFFAASDGIVLENLAIRFMKEIQIPEARAFYGFQIAIENIHSEMYSLLLEAYI 121

Query: 140 LDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            D  E   LFN    +P +T KA WAL++  +                   R L F C
Sbjct: 122 KDHAEKNRLFNAIETIPCVTKKAEWALKWIHSA-------------GSFAERILAFAC 166


>gi|328872436|gb|EGG20803.1| ribonucleotide reductase small subunit [Dictyostelium fasciculatum]
          Length = 335

 Score =  217 bits (552), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 10/175 (5%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L    D   L P+KY   W  Y  A  + W   E+ +  D+  W++K  L D+ER 
Sbjct: 6   EEPLLKENKDRFVLFPIKYTDIWNMYKKAEASFWTAEEIDLASDVNEWENK--LNDNERH 63

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            IK  L FFA+S+ +V  N+       +  PE R +   Q   E +HS T+  +I +   
Sbjct: 64  FIKNVLAFFAASDGIVNENLATKFMSEVQIPEARCFYGFQIAIENIHSETYSLLIDTYIK 123

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           +  E   LFN    +P +  KA+WAL++     S     + +R  +      + F
Sbjct: 124 NPDEKKVLFNAIETIPCVKKKADWALRWITNSKS-----FAERLVAFAAVEGIFF 173


>gi|75224904|sp|Q6Y657|RIR2B_ARATH RecName: Full=Putative ribonucleoside-diphosphate reductase small
           chain B; AltName: Full=Ribonucleoside-diphosphate
           reductase R2B subunit; AltName: Full=Ribonucleotide
           reductase small subunit B
 gi|37729626|gb|AAO62422.1| ribonucleotide reductase small subunit [Arabidopsis thaliana]
          Length = 333

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 47/177 (26%), Positives = 74/177 (41%), Gaps = 18/177 (10%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L    D   + P++Y   WE Y  A  + W   EV +  D   W+  N LT+DER 
Sbjct: 6   EEPILTPTPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWE--NSLTNDERH 63

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            IK  L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  ++ +   
Sbjct: 64  FIKHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSEMYSLLLDTYIK 123

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           D  E   LF     +P +T KA WA+++                      R + F C
Sbjct: 124 DNKERDHLFRAIETIPCVTKKAEWAMKWING-------------SQSFAERIVAFAC 167


>gi|73974200|ref|XP_858061.1| PREDICTED: similar to ribonucleotide reductase M2 B (TP53
           inducible) isoform 3 [Canis familiaris]
          Length = 338

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 51/185 (27%), Positives = 82/185 (44%), Gaps = 10/185 (5%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
              E  V  D++ +L   S    + P++Y   W+ Y  A  + W   EV +  DL  W  
Sbjct: 21  DTNENEVKSDEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHW-- 78

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            N L  DE+  I   L FFA+S+ +V  N+V    + +  PE R +   Q   E VHS  
Sbjct: 79  -NKLKSDEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEM 137

Query: 131 FQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILT 187
           +  +I +   D  +   LFN    +P +  KA+WAL++ +   S     + +R  +    
Sbjct: 138 YSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIEDRKS----TFGERVVAFAAV 193

Query: 188 RSLRF 192
             + F
Sbjct: 194 EGIFF 198


>gi|213511642|ref|NP_001133495.1| Ribonucleoside-diphosphate reductase subunit M2 [Salmo salar]
 gi|209154228|gb|ACI33346.1| Ribonucleoside-diphosphate reductase subunit M2 [Salmo salar]
          Length = 387

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 49/195 (25%), Positives = 85/195 (43%), Gaps = 13/195 (6%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
            A+++ + P     K+ N ++  +L        + P+KY   W+ Y  A  + W   EV 
Sbjct: 50  FADDSEVKP--QNVKKFNTEE-PLLKENPRRFVIFPIKYHDIWQMYKKAEASFWTAEEVD 106

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           +  D   W   + L D+ER  I   L FFA+S+ +V  N+V    + +   E R +   Q
Sbjct: 107 LSKDTQHW---DSLKDEERYFISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQ 163

Query: 121 AFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYW 177
              E +HS  +  +I +   D  E   LFN    +P +  KA+WAL +    ++     +
Sbjct: 164 IAMENIHSEMYSLLIDTYIKDPKERDYLFNAIETLPCVKRKADWALNWIGNKNA----GF 219

Query: 178 NKRRRSRILTRSLRF 192
            +R  +      + F
Sbjct: 220 GERVVAFAAVEGIFF 234


>gi|307110551|gb|EFN58787.1| hypothetical protein CHLNCDRAFT_34102 [Chlorella variabilis]
          Length = 335

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 48/184 (26%), Positives = 79/184 (42%), Gaps = 19/184 (10%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           E+ +    + +L +  D   + P+KY   WE Y  A  + W   EV +  D+  W+    
Sbjct: 6   EQSLEDSQEPLLASNDDRFVMFPIKYRDIWEMYKKAEASFWTAEEVDLGSDVKDWE---R 62

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           L+DDER  +   L FFA+S+ +V  N+     + +  PE R +   Q   E +HS  +  
Sbjct: 63  LSDDERHFVSHVLAFFAASDGIVNENLGARFMQEVQVPEARAFYGFQIAMENIHSEMYSL 122

Query: 134 IITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSL 190
           ++ +   D  E   LF+    VP +  KA+WAL++                      R +
Sbjct: 123 LLEAYIKDPKEKDKLFHAIDTVPVVRKKAHWALKWING-------------SDLFSERLI 169

Query: 191 RFLC 194
            F C
Sbjct: 170 AFAC 173


>gi|292397811|ref|YP_003517877.1| RR2b [Lymantria xylina MNPV]
 gi|291065528|gb|ADD73846.1| RR2b [Lymantria xylina MNPV]
          Length = 338

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 49/189 (25%), Positives = 80/189 (42%), Gaps = 11/189 (5%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           L+P   GEK  +   + +L        + P++Y   W  Y  A  + W   EV +  D  
Sbjct: 6   LAPAD-GEKPFDPQAEPLLRENPRRFVIFPIQYSDMWSMYKKAEASFWTVEEVDLSKDTR 64

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            W+    L D+ER  IK  L FFA+S+ +V  N+V    + +   E R +   Q   E V
Sbjct: 65  DWE---RLNDNERHFIKHVLAFFAASDGIVNENLVERFAQEVQVVEARCFYGFQIAMENV 121

Query: 127 HSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           HS  +  +I +      E   L N    +P +  KA WAL++  +  +     + +R  +
Sbjct: 122 HSEMYSTLIDTYVRSSEEKLRLLNAIETMPCVKEKAEWALRWIASKEA----TFGERLVA 177

Query: 184 RILTRSLRF 192
                 + F
Sbjct: 178 FAAVEGVFF 186


>gi|197101489|ref|NP_001125944.1| ribonucleoside-diphosphate reductase subunit M2 B [Pongo abelii]
 gi|75041724|sp|Q5R9G0|RIR2B_PONAB RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B
 gi|55729743|emb|CAH91600.1| hypothetical protein [Pongo abelii]
          Length = 351

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 10/193 (5%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           +    S     E  +  +++ +L   S    + P++Y   W+ Y  A  + W   EV + 
Sbjct: 13  DQDERSSSDTNENEIKSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLS 72

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            DL  W   N L  DE+  I   L FFA+S+ +V  N+V    + +  PE R +   Q  
Sbjct: 73  KDLPHW---NKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQIL 129

Query: 123 EEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNK 179
            E VHS  +  +I +   D  +   LFN    +P +  KA+WAL++     S     + +
Sbjct: 130 IENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKS----TFGE 185

Query: 180 RRRSRILTRSLRF 192
           R  +      + F
Sbjct: 186 RVVAFAAVEGVFF 198


>gi|316971821|gb|EFV55552.1| ribonucleotide reductase R2 subunit [Trichinella spiralis]
          Length = 366

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 10/188 (5%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           +P++     ++  ++ +L +      LLPL+Y   W  Y  A  + W   EV ++ D   
Sbjct: 33  TPMEQDAAAIDNCEEPLLRSNPKRFVLLPLEYPDIWAMYKKAEASFWTVEEVDLRKDAND 92

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           W     L  DE+  I   L FFA+S+ +V  N+V    + +   E R +   Q   E VH
Sbjct: 93  WAK---LNKDEKHFISHVLAFFAASDGIVFENLVERFSQEIQVTEARFFYGFQIAIENVH 149

Query: 128 SHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           S  +  +I +   D  E   LFN    +P +  KA+WAL++     SP    + +R  + 
Sbjct: 150 SEMYSLLIDTYIRDPVERDFLFNAIETIPCVKKKADWALRWIGDRQSP----FCERLVAF 205

Query: 185 ILTRSLRF 192
                + F
Sbjct: 206 AAVEGIFF 213


>gi|149279601|ref|ZP_01885730.1| ribonucleoside-diphosphate reductase 1, beta subunit [Pedobacter
           sp. BAL39]
 gi|149229637|gb|EDM35027.1| ribonucleoside-diphosphate reductase 1, beta subunit [Pedobacter
           sp. BAL39]
          Length = 324

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 48/178 (26%), Positives = 75/178 (42%), Gaps = 20/178 (11%)

Query: 20  DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER 79
           +++ +L    D   LLP+KY   WE Y  +  + W   E+ + DD   W   + L D ER
Sbjct: 3   EEEVLLKENKDRFVLLPIKYPEIWEMYKKSEASFWTAEEIDLSDDQKHW---DNLNDGER 59

Query: 80  LMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
             I   L FF++S+ +V  N+ +     +  PE R +   Q   E +HS T+  +I +  
Sbjct: 60  HFISHILAFFSASDGIVNENLAVNFMSEVQLPEARCFYGFQIMMENIHSETYALLIDTYI 119

Query: 140 LDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            D  E   LF+    VP +  KA WAL++                      R + F  
Sbjct: 120 KDPEEKDRLFHAIETVPCVKKKAEWALRWID--------------NGNFAERLVAFAA 163


>gi|242012701|ref|XP_002427066.1| Ribonucleoside-diphosphate reductase M2 subunit, putative
           [Pediculus humanus corporis]
 gi|212511324|gb|EEB14328.1| Ribonucleoside-diphosphate reductase M2 subunit, putative
           [Pediculus humanus corporis]
          Length = 304

 Score =  216 bits (551), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 44/184 (23%), Positives = 77/184 (41%), Gaps = 10/184 (5%)

Query: 12  AGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSK 71
              +  N + + +L        + P+++   W  Y  A  + W   EV +  DL  W+  
Sbjct: 22  NDSRVFNKEIEPLLKENIKRFVIFPIEFPDIWHMYKKAEASFWTVEEVDLSKDLEHWE-- 79

Query: 72  NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
             L   ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E VHS  +
Sbjct: 80  -RLKPSERHFISHVLAFFAASDGIVNENLVERFSQEVQVSEARCFYGFQIAMENVHSEMY 138

Query: 132 QYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
             +I +   +  E   LFN    +P +  KA+WAL++    ++     + +R  +     
Sbjct: 139 SLLIDTYIKNPTEKHFLFNAIETMPCVKKKADWALKWISHKTA----TFAERVVAFAAVE 194

Query: 189 SLRF 192
            + F
Sbjct: 195 GIFF 198


>gi|148232385|ref|NP_001085389.1| ribonucleotide reductase M2, gene 1 [Xenopus laevis]
 gi|48735122|gb|AAH72071.1| MGC78958 protein [Xenopus laevis]
          Length = 406

 Score =  216 bits (550), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 47/181 (25%), Positives = 80/181 (44%), Gaps = 10/181 (5%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + D+ +L        +LP++Y   W+ Y  A  + W   EV +  DL  W++   L
Sbjct: 80  KDPLIQDEPLLRDNPGRFVILPIEYHDIWQMYKKAEASFWTAEEVDLSKDLQHWET---L 136

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
             +ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +
Sbjct: 137 KPEERYFIAYVLAFFAASDGIVNENLVERFSQEVQVTEVRCFYGFQIAMENIHSEMYSLL 196

Query: 135 ITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           I +   D  E   LFN    +P +  KA W+L++     +P    + +R  +      + 
Sbjct: 197 IDTYIKDPKEREFLFNAIETLPCVKKKAEWSLRWISDREAP----YCERLVAFAAVEGIF 252

Query: 192 F 192
           F
Sbjct: 253 F 253


>gi|90660281|gb|ABD97395.1| ribonucleotide reductase small subunit [Cowpox virus]
          Length = 333

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 11/179 (6%)

Query: 17  VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           VN+  + +L    +   + P++Y   W  Y  A  + W   EV +  D+  W   N LT 
Sbjct: 11  VNLVMEPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTP 67

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
           DE+  IK  L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  +I 
Sbjct: 68  DEKYFIKHVLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLID 127

Query: 137 SLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           +   D  E   LFN    +P +  KA+WA ++    +      + +R  +      + F
Sbjct: 128 TYVKDSNEKNYLFNAIETMPCVKKKADWAQKWIHDSAG-----YGERLIAFTAVEGIFF 181


>gi|325110864|ref|YP_004271932.1| ribonucleotide reductase [Planctomyces brasiliensis DSM 5305]
 gi|324971132|gb|ADY61910.1| ribonucleotide reductase [Planctomyces brasiliensis DSM 5305]
          Length = 353

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 101/185 (54%), Positives = 132/185 (71%), Gaps = 2/185 (1%)

Query: 10  IQAGEKRVNVDDKRMLNA-RSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           + A   R    +KR++N  + DVNQL+P+KY WAWE YL+ C NHWMPTEVPM  D+ +W
Sbjct: 12  LDAPTGRFKASEKRLINCAQVDVNQLMPIKYAWAWEHYLNGCANHWMPTEVPMTKDIEVW 71

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           KS N L+DDERL+I RNLGFF+++ESLV NN+VLAI++H++N ECRQYLLRQAFEEAVH+
Sbjct: 72  KS-NKLSDDERLVIMRNLGFFSTAESLVGNNLVLAIFKHVTNAECRQYLLRQAFEEAVHT 130

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
           HTF Y++ SLGL EGE+FNMY EVP+I  K  + ++ T  + S  F       R   L  
Sbjct: 131 HTFLYVVDSLGLHEGEVFNMYHEVPAIARKDEFEMKLTAEVLSEDFTTETYEGRQTFLRN 190

Query: 189 SLRFL 193
            + + 
Sbjct: 191 LIGYY 195


>gi|50311465|ref|XP_455757.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644893|emb|CAG98465.1| KLLA0F15103p [Kluyveromyces lactis]
          Length = 401

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 50/177 (28%), Positives = 76/177 (42%), Gaps = 17/177 (9%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           D+ +L        L P+KY   WE Y  A  + W   E+ +  DL  W   N + ++ER 
Sbjct: 75  DEPLLVENKRRFVLFPIKYHEIWEAYKRAEASFWTAEEIDLSKDLHDWN--NRMNENERF 132

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I R L FFA+S+ +V  N+V      +  PE + +   Q   E +HS T+  +I +   
Sbjct: 133 FISRILAFFAASDGIVNENLVENFSAEVQAPEAKCFYGFQIMMENIHSETYSLLIDTYIK 192

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           D  E   LFN    +P I  KA WA+++ Q               +    R + F  
Sbjct: 193 DPKESEFLFNAIETIPQIKEKAEWAIRWIQ------------DDDALFGERLVAFAA 237


>gi|195172750|ref|XP_002027159.1| GL20023 [Drosophila persimilis]
 gi|198459455|ref|XP_001361381.2| GA21447 [Drosophila pseudoobscura pseudoobscura]
 gi|194112972|gb|EDW35015.1| GL20023 [Drosophila persimilis]
 gi|198136695|gb|EAL25959.2| GA21447 [Drosophila pseudoobscura pseudoobscura]
          Length = 391

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 10/194 (5%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
                 S ++      +   + +L        + P++Y   W+ Y  A  + W   EV +
Sbjct: 52  PEKPAQSIMEKTGSPFDPSIEPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDL 111

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D   W     LTD+ER  I   L FFA+S+ +V  N+V    + +   E R +   Q 
Sbjct: 112 SKDATDWA---RLTDNERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQI 168

Query: 122 FEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWN 178
             E VHS  +  +I +   +  E   LFN    +P++  KA+WA+ +  + S+     + 
Sbjct: 169 AMENVHSEMYSVLIDTYIREPQERDYLFNAIETMPAVKRKADWAMSWISSKSA----NFA 224

Query: 179 KRRRSRILTRSLRF 192
           +R  +      + F
Sbjct: 225 ERIIAFAAVEGIFF 238


>gi|281340156|gb|EFB15740.1| hypothetical protein PANDA_011632 [Ailuropoda melanoleuca]
          Length = 336

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 50/185 (27%), Positives = 81/185 (43%), Gaps = 10/185 (5%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
              E     D++ +L   S    + P++Y   W+ Y  A  + W   EV +  DL  W  
Sbjct: 6   DTNENEAKSDEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHW-- 63

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            N L  DE+  I   L FFA+S+ +V  N+V    + +  PE R +   Q   E VHS  
Sbjct: 64  -NKLKSDEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEM 122

Query: 131 FQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILT 187
           +  +I +   D  +   LFN    +P +  KA+WAL++ +   S     + +R  +    
Sbjct: 123 YSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIEDRKS----TFGERVVAFAAV 178

Query: 188 RSLRF 192
             + F
Sbjct: 179 EGIFF 183


>gi|296227440|ref|XP_002759377.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
           isoform 1 [Callithrix jacchus]
          Length = 351

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 50/193 (25%), Positives = 83/193 (43%), Gaps = 10/193 (5%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           +    S     E  +  +++ +L   S    + P++Y   W+ Y  A  + W   EV + 
Sbjct: 13  DQDERSSADTNENEIKSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLS 72

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            DL  W   N L  DE+  I   L FFA+S+ +V  N+V    + +  PE R +   Q  
Sbjct: 73  KDLPHW---NKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQIL 129

Query: 123 EEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNK 179
            E VHS  +  +I +   D  +   LFN    +P +  KA+WAL++     S     + +
Sbjct: 130 IENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKS----TFGE 185

Query: 180 RRRSRILTRSLRF 192
           R  +      + F
Sbjct: 186 RVVAFAAVEGVFF 198


>gi|47208564|emb|CAF96041.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 352

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 10/176 (5%)

Query: 20  DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER 79
           + + +L        + P++Y   W+ Y  A  + W   EV +  DLA W   + L  +E+
Sbjct: 3   EGEPLLQENPRRFVIFPIQYPDIWKMYKQAQASFWTVEEVDLSKDLAHW---DSLKPEEK 59

Query: 80  LMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
             I   L FFA+S+ +V  N+V    + +  PE R +   Q   E+VHS  +  +I +  
Sbjct: 60  HFISHVLAFFAASDGIVNENLVQRFCQEVQVPEARSFYSYQVLIESVHSEMYSLLINTYI 119

Query: 140 LDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
            D  E   LFN    +P +  KA+WALQ+    +S     + +R  +      + F
Sbjct: 120 RDLKEREHLFNAIYTMPCVKRKADWALQWINDSTS----TFGERLVAFAAVEGIFF 171


>gi|67906414|gb|AAY82584.1| ribonucleotide reductase subunit 2 [Carassius carassius]
          Length = 246

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 45/174 (25%), Positives = 76/174 (43%), Gaps = 10/174 (5%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L        + P++Y   W+ Y  A  + W   EV +  DL  W   + L D+ER  
Sbjct: 1   EPLLKENPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHW---DSLKDEERYF 57

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +I +   D
Sbjct: 58  ISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKD 117

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             E   LFN    +P +  KA+WAL +    ++     + +R  +      + F
Sbjct: 118 PKERDFLFNAIETMPCVKKKADWALNWIGDKNAQ----YGERVVAFAAVEGIFF 167


>gi|4836362|gb|AAD30422.1|AF117061_1 ribonucleotide reductase R2 subunit [Aedes albopictus]
          Length = 398

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 47/195 (24%), Positives = 82/195 (42%), Gaps = 10/195 (5%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +A N   +  +  +   +   + +L        + P++Y   W+ Y  A  + W   EV 
Sbjct: 58  LAKNEMSAAHKREQTPFDPSIEPLLKENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVD 117

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           +  DLA W+    L   E+  I   L FFA+S+ +V  N+V    + +   E R +   Q
Sbjct: 118 LSKDLADWEK---LKSGEKHFISHVLAFFAASDGIVNVNLVERFSQEVQVTEARCFYGFQ 174

Query: 121 AFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYW 177
              E VHS  +  +I +   D  E   LFN    +P +  KA+WAL +  +  +     +
Sbjct: 175 IAMENVHSEMYSLLIDTYIRDSKEREYLFNAIDNLPCVKKKADWALNWISSKQA----NF 230

Query: 178 NKRRRSRILTRSLRF 192
            +R  +      + F
Sbjct: 231 GERVVAFAAVEGIFF 245


>gi|149248382|ref|XP_001528578.1| ribonucleoside-diphosphate reductase small chain [Lodderomyces
           elongisporus NRRL YB-4239]
 gi|146448532|gb|EDK42920.1| ribonucleoside-diphosphate reductase small chain [Lodderomyces
           elongisporus NRRL YB-4239]
          Length = 422

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 17/177 (9%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           D+ +L        + P++Y   W+ Y  A  + W   E+ +  D+  WK+K  L ++ER 
Sbjct: 98  DEPLLKENKRRYVMFPIRYHEIWQMYKKAEASFWTAEEIDLGKDMHDWKNK--LNENERF 155

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I R L FFA+S+ +V  N+V      +  PE + +   Q   E +HS T+  +I +   
Sbjct: 156 FISRILAFFAASDGIVNENLVENFSAEVQIPEAKSFYGFQIMMENIHSETYSLLIDTYIK 215

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           D  E   LFN    +P I  KA+WA+++                 +    R + F  
Sbjct: 216 DPKEADFLFNAIDNIPQIKKKADWAIRWIN------------DDNALFAERLVAFAA 260


>gi|9631087|ref|NP_047757.1| ribonucleotide reductase small subunit homolog [Lymantria dispar
           MNPV]
 gi|3822355|gb|AAC70306.1| ribonucleotide reductase small subunit homolog [Lymantria dispar
           MNPV]
          Length = 348

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 6/160 (3%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
             A E+  +   + +L        + P++Y   W  Y  A  + W   EV +  D + W+
Sbjct: 18  APAPERPFDPRAEPLLRENPRRFVIFPIQYPDMWRMYKKAEASFWTVEEVDLSKDTSDWE 77

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
               L D+ER  IK  L FFA+S+ +V  N+V    + +   E R +   Q   E VHS 
Sbjct: 78  ---RLNDNERHFIKHVLAFFAASDGIVNENLVERFAQEVQVAEARCFYGFQIAMENVHSE 134

Query: 130 TFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYT 166
            +  +I +      E   L N    +P +  KA WAL++ 
Sbjct: 135 MYSTLIDTYVRSSEEKLRLLNAIETMPCVKEKAEWALRWI 174


>gi|149721713|ref|XP_001493623.1| PREDICTED: ribonucleotide reductase M2 B (TP53 inducible) [Equus
           caballus]
          Length = 351

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 51/185 (27%), Positives = 81/185 (43%), Gaps = 10/185 (5%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
              E     +++ +L   S    + P++Y   W+ Y  A  + W   EV +  DL  W  
Sbjct: 21  DTNENEAKSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHW-- 78

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            N LT DE+  I   L FFA+S+ +V  N+V    + +  PE R +   Q   E VHS  
Sbjct: 79  -NKLTSDEKYFISHVLAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEM 137

Query: 131 FQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILT 187
           +  +I +   D  +   LFN    +P +  KA+WALQ+     S     + +R  +    
Sbjct: 138 YSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALQWIADRKS----TFGERVVAFAAV 193

Query: 188 RSLRF 192
             + F
Sbjct: 194 EGIFF 198


>gi|75076588|sp|Q4R741|RIR2B_MACFA RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B
 gi|67969468|dbj|BAE01083.1| unnamed protein product [Macaca fascicularis]
          Length = 351

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 10/189 (5%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
            S     +  +  +++ +L   S    + P++Y   W+ Y  A  + W   EV +  DL 
Sbjct: 17  RSSSDTNDNEIKSNEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLP 76

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            W   N L  DE+  I   L FFA+S+ +V  N+V    + +  PE R +   Q   E V
Sbjct: 77  HW---NKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENV 133

Query: 127 HSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           HS  +  +I +   D  +   LFN    +P +  KA+WAL++     S     + +R  +
Sbjct: 134 HSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKS----TFGERVVA 189

Query: 184 RILTRSLRF 192
                 + F
Sbjct: 190 FAAVEGIFF 198


>gi|87311395|ref|ZP_01093515.1| ribonucleotide-diphosphate reductase beta subunit [Blastopirellula
           marina DSM 3645]
 gi|87285807|gb|EAQ77721.1| ribonucleotide-diphosphate reductase beta subunit [Blastopirellula
           marina DSM 3645]
          Length = 313

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 104/195 (53%), Positives = 140/195 (71%), Gaps = 3/195 (1%)

Query: 1   MANNTGLSPIQAGEK-RVNVDDKRMLNA-RSDVNQLLPLKYGWAWEKYLSACNNHWMPTE 58
           M+     + ++ G+  RV  +DKR++N  + DVNQL+PLKY WAWE Y++ C NHWMPTE
Sbjct: 1   MSIPNVENQLETGDGQRVRANDKRLVNCSQVDVNQLMPLKYNWAWEHYMNGCANHWMPTE 60

Query: 59  VPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLL 118
           VPM  D+  W+S + LTDDERL+I RNLGFF+++ESLV NN+VLAI++H++N ECRQYLL
Sbjct: 61  VPMTKDIETWRS-DKLTDDERLVIMRNLGFFSTAESLVGNNLVLAIFKHVTNAECRQYLL 119

Query: 119 RQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWN 178
           RQAFEEAVHSHTF Y++ SLGL+EGE+FNMY EVP+I  K  + ++ T  + SP F   +
Sbjct: 120 RQAFEEAVHSHTFLYVVESLGLNEGEIFNMYNEVPAIARKDQFEMKLTAEVLSPDFSTDS 179

Query: 179 KRRRSRILTRSLRFL 193
                  L   + + 
Sbjct: 180 YEGLQAFLKNLIGYY 194


>gi|56713400|gb|AAW23440.1| ribonucleoside-diphosphate reductase [Vaccinia virus]
 gi|56713684|gb|AAW23722.1| ribonucleoside-diphosphate reductase [Vaccinia virus]
 gi|88854075|gb|ABD52493.1| ribonucleoside-diphosphate reductase subunit [Vaccinia virus]
 gi|167412519|gb|ABZ79953.1| ribonucleotide reductase small subunit [Vaccinia virus GLV-1h68]
          Length = 319

 Score =  215 bits (549), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 11/174 (6%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    +   + P++Y   W  Y  A  + W   EV +  D+  W   N LT DE+  
Sbjct: 2   EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPDEKYF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  +I +   D
Sbjct: 59  IKHVLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKD 118

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             E   LFN    +P +  KA+WA ++    +      + +R  +      + F
Sbjct: 119 SNEKNYLFNAIETMPCVKKKADWAQKWIHDSAG-----YGERLIAFAAVEGIFF 167


>gi|110763195|ref|XP_397443.3| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 isoform
           1 [Apis mellifera]
          Length = 384

 Score =  215 bits (548), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 48/195 (24%), Positives = 83/195 (42%), Gaps = 10/195 (5%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           + N   +  +   E + N + + +L        + P+++   W+ Y  A  + W   EV 
Sbjct: 44  VINTKAIQNMYLKENKFNPELEPLLKENPRRFVVFPIQWPDIWQMYKKAEASFWTVEEVD 103

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           +  D+  W   N LT  E+  I   L FFA+S+ +V  N+V    + +   E R +   Q
Sbjct: 104 LSKDVFDW---NNLTASEKHFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQ 160

Query: 121 AFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYW 177
              E VHS  +  +I +   D  E   LFN    +P +  KA+WAL +    S+     +
Sbjct: 161 VAMENVHSEMYSLLIDTYIADAKERDFLFNAIENLPCVAKKAHWALNWINHESA----TF 216

Query: 178 NKRRRSRILTRSLRF 192
            +R  +      + F
Sbjct: 217 PERVVAFAAVEGIFF 231


>gi|145349720|ref|XP_001419276.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579507|gb|ABO97569.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 329

 Score =  215 bits (548), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 19/176 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L+       + P++Y   WE Y  A  + W   EV + DD+  W++   LT DE+  
Sbjct: 8   EPLLDENDQRFTMFPIQYPQVWEMYKKAEASFWTAEEVDLSDDMKHWET---LTKDEKHF 64

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           +   L FFA+S+ +V  N+ +     +  PE R +   Q   E +HS  +  +I     D
Sbjct: 65  VSHVLAFFAASDGIVLENLGVRFMGEVQIPEARAFYGFQIAIENIHSEMYSLLIDQYIKD 124

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             E   LF     +P +  KA+WAL++  +  S                R L F C
Sbjct: 125 PVEKDHLFRAIDTIPCVKKKADWALKWIDSSDS-------------FAERLLAFAC 167


>gi|110636874|ref|YP_677081.1| ribonucleoside-diphosphate reductase 1 subunit beta [Cytophaga
           hutchinsonii ATCC 33406]
 gi|110279555|gb|ABG57741.1| ribonucleoside-diphosphate reductase 1, beta subunit [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 324

 Score =  215 bits (548), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 44/181 (24%), Positives = 75/181 (41%), Gaps = 20/181 (11%)

Query: 17  VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           +++ ++ +L    +   L P+K+   W  Y     + W   E+ +  DL  W +   L D
Sbjct: 1   MSLLEEPLLKENKNRFVLFPIKHDDIWAMYKQEEASFWTAEEIDLSQDLIDWAN---LND 57

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
            ER  I   L FFA+S+ +V  N+ +     +  PE + +   Q   E +HS T+  +I 
Sbjct: 58  GERHFISHVLAFFAASDGIVNENLAVNFLEKVQIPEAKCFYGFQIMMENIHSETYSLLID 117

Query: 137 SLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           +   D  E   LFN    VP +  KA+WAL++                    +   + F 
Sbjct: 118 TYIKDPKEKDRLFNAIDTVPCVKKKADWALRFID--------------NGSFIENIIAFA 163

Query: 194 C 194
            
Sbjct: 164 A 164


>gi|44971395|gb|AAS49745.1| RPXV032 [Rabbitpox virus]
          Length = 319

 Score =  215 bits (548), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 11/174 (6%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    +   + P++Y   W  Y  A  + W   EV +  D+  W   N LT DE+  
Sbjct: 2   EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPDEKYF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  +I +   D
Sbjct: 59  IKHVLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKD 118

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             E   LFN    +P +  KA+WA ++    +      + +R  +      + F
Sbjct: 119 SNEKNYLFNAIETMPCVKKKADWAQKWIHDSAG-----YGERLIAFAAVEGIFF 167


>gi|312889900|ref|ZP_07749444.1| Ribonucleoside-diphosphate reductase [Mucilaginibacter paludis DSM
           18603]
 gi|311297432|gb|EFQ74557.1| Ribonucleoside-diphosphate reductase [Mucilaginibacter paludis DSM
           18603]
          Length = 343

 Score =  215 bits (548), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 48/182 (26%), Positives = 77/182 (42%), Gaps = 20/182 (10%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           R++ +++ +L    D   +LP+ Y   WE Y     + W   E+ + DD+  W   N L 
Sbjct: 19  RMSQENELLLRENKDRFVILPINYPQIWEMYKKHEASFWTAEEIDLSDDMKDW---NNLN 75

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           D ER  I   L FFA+S+ +V  N+ +     +  PE R +   Q   E +HS T+  +I
Sbjct: 76  DGERHFISHILAFFAASDGIVNENLAVNFMSEVQLPEARCFYGFQIMMENIHSETYALLI 135

Query: 136 TSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
            +   D  E   LF+    VP +  K  WAL++ +                    R + F
Sbjct: 136 DTYIKDTTEKNRLFHAIETVPCVKKKGEWALKWIE--------------NGTFAERLVAF 181

Query: 193 LC 194
             
Sbjct: 182 AA 183


>gi|56404698|sp|O57175|RIR2_VACCA RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|2772676|gb|AAB96415.1| ribonucleotide reductase, small subunit [Vaccinia virus]
 gi|47088360|gb|AAT10430.1| ribonucleotide reductase small subunit [Vaccinia virus]
 gi|160857924|emb|CAM58212.1| ribonucleotide reductase small subunit [Vaccinia virus Ankara]
          Length = 319

 Score =  215 bits (548), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 11/174 (6%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    +   + P++Y   W  Y  A  + W   EV +  D+  W   N LT DE+  
Sbjct: 2   EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPDEKYF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  +I +   D
Sbjct: 59  IKHVLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKD 118

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             E   LFN    +P +  KA+WA ++    +      + +R  +      + F
Sbjct: 119 SNEKNYLFNAIETMPCVKKKADWAQKWIHDSAG-----YGERLIAFAAVEGIFF 167


>gi|111184227|gb|ABH08147.1| HSPV044 [Horsepox virus]
          Length = 319

 Score =  215 bits (547), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 11/174 (6%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    +   + P++Y   W  Y  A  + W   EV +  D+  W   N LT DE+  
Sbjct: 2   EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPDEKYF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  +I +   D
Sbjct: 59  IKHVLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKD 118

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             E   LFN    +P +  KA+WA ++    +      + +R  +      + F
Sbjct: 119 SNEKNYLFNAIETMPCVKKKADWAQKWIHDSAG-----YGERLIAFAAVEGIFF 167


>gi|22164633|ref|NP_671546.1| EVM028 [Ectromelia virus]
 gi|22123774|gb|AAM92332.1|AF523264_28 EVM028 [Ectromelia virus]
          Length = 319

 Score =  215 bits (547), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 11/174 (6%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    +   + P++Y   W  Y  A  + W   EV +  D+  W   N LT DE+  
Sbjct: 2   EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPDEKYF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  +I +   D
Sbjct: 59  IKHVLAFFAASDGIVNENLAERFCTEVQVTEARCFYGFQMAIENIHSEMYSLLIDTYVKD 118

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             E   LFN    +P +  KA+WA ++    +      + +R  +      + F
Sbjct: 119 SNEKNYLFNAIETMPCVKKKADWAQKWIHDSAG-----YGERLIAFAAVEGIFF 167


>gi|6969682|gb|AAF33894.1| TF4L [Vaccinia virus Tian Tan]
          Length = 319

 Score =  215 bits (547), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 11/174 (6%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    +   + P++Y   W  Y  A  + W   EV +  D+  W   N LT DE+  
Sbjct: 2   EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPDEKYF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  +I +   D
Sbjct: 59  IKHVLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKD 118

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             E   LFN    +P +  KA+WA ++    +      + +R  +      + F
Sbjct: 119 SNEKNYLFNAIETMPCVKKKADWAQKWIHDSAG-----YGERLIAFAAVEGIFF 167


>gi|438946|gb|AAA60776.1| homolog of vaccinia virus CDS F4L (ribonucleotide reductase, small
           chain); putative [Variola major virus]
 gi|94484491|gb|ABF23604.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94484688|gb|ABF23800.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94484886|gb|ABF23997.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109724274|gb|ABG43399.1| ribonucleotide reductase small subunit [Variola virus]
          Length = 333

 Score =  215 bits (547), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 11/179 (6%)

Query: 17  VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           VN+  + +L    +   + P++Y   W  Y  A  + W   EV +  D+  W   N LT 
Sbjct: 11  VNLVMEPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTP 67

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
           DE+  IK  L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  +I 
Sbjct: 68  DEKYFIKHVLAFFAASDGIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLID 127

Query: 137 SLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           +   D  E   LFN    +P +  KA+WA ++    +S     + +R  +      + F
Sbjct: 128 TYVKDSNEKNYLFNAIETMPCVKKKADWAQKWIHDSAS-----YGERLIAFAAVEGIFF 181


>gi|17974949|ref|NP_536463.1| C10L [Monkeypox virus Zaire-96-I-16]
 gi|17529816|gb|AAL40494.1|AF380138_36 C10L [Monkeypox virus Zaire-96-I-16]
 gi|51342196|gb|AAU01240.1| MPXV-WRAIR030 [Monkeypox virus]
 gi|58220500|gb|AAW67788.1| MPXV-SL-030 [Monkeypox virus]
 gi|59858836|gb|AAX09131.1| MPXV-COP-030 [Monkeypox virus]
 gi|68448710|gb|AAY96833.1| ribonucleotide reductase small subunit [Monkeypox virus]
 gi|68448912|gb|AAY97034.1| ribonucleotide reductase small subunit [Monkeypox virus]
 gi|68449113|gb|AAY97234.1| ribonucleotide reductase small subunit [Monkeypox virus]
 gi|68449313|gb|AAY97433.1| ribonucleotide reductase small subunit [Monkeypox virus]
 gi|68449512|gb|AAY97631.1| ribonucleotide reductase small subunit [Monkeypox virus]
 gi|300872658|gb|ADK39060.1| ribonucleotide reductase small subunit [Monkeypox virus]
          Length = 319

 Score =  215 bits (547), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 11/174 (6%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    +   + P++Y   W  Y  A  + W   EV +  D+  W   N LT DE+  
Sbjct: 2   EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPDEKYF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  +I +   D
Sbjct: 59  IKHVLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKD 118

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             E   LFN    +P +  KA+WA ++    +      + +R  +      + F
Sbjct: 119 SNEKNYLFNAIETMPCVKKKADWAQKWIHDSAG-----YGERLIAFAAVEGIFF 167


>gi|156386903|ref|XP_001634150.1| predicted protein [Nematostella vectensis]
 gi|156221230|gb|EDO42087.1| predicted protein [Nematostella vectensis]
          Length = 384

 Score =  214 bits (546), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 10/195 (5%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           M ++         + R N +D+ +L        +LP++Y   W+ Y  A  + W   EV 
Sbjct: 44  MVSDRTPPKKSRAKSRFNTEDEPLLRENPHRFVILPIQYPEIWQMYKKAEASFWTAEEVD 103

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           +  D   +     L DDER+ +   L FFA+S+ +V  N+V    + +  PE R +   Q
Sbjct: 104 LSKDSHDFAK---LNDDERMFVSHVLAFFAASDGIVNENLVECFCQEVQIPEARCFYGFQ 160

Query: 121 AFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYW 177
              E +HS  +  +I SL  D+ E   LFN    +P +  KA+WAL +     +P    +
Sbjct: 161 IAIENIHSEMYSLLIESLIKDKAEKVNLFNAIETMPCVMKKAHWALNWI----NPQRASF 216

Query: 178 NKRRRSRILTRSLRF 192
            +R  +      + F
Sbjct: 217 GERIIAFAAVEGIFF 231


>gi|255711354|ref|XP_002551960.1| KLTH0B03938p [Lachancea thermotolerans]
 gi|238933338|emb|CAR21522.1| KLTH0B03938p [Lachancea thermotolerans]
          Length = 403

 Score =  214 bits (546), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 47/177 (26%), Positives = 77/177 (43%), Gaps = 17/177 (9%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L        L P+KY   W+ Y  A  + W   E+ +  DL  W   N + ++ER 
Sbjct: 77  EEPLLMENKRRFVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDLHDWN--NRMNENERF 134

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I R + FFA+S+ +V  N+V      + +PE + +   Q   E +HS T+  +I +   
Sbjct: 135 FISRVIAFFAASDGIVNENLVENFSAEVQSPEAKCFYGFQIMMENIHSETYSLLIDTYIK 194

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           D  E   LFN    +P I  KA WA+++ Q               +    R + F  
Sbjct: 195 DPKESDFLFNAIETIPQIKEKAEWAIRWIQ------------DEDALFAERLVAFAA 239


>gi|91081999|ref|XP_969259.1| PREDICTED: similar to AGAP006818-PA [Tribolium castaneum]
 gi|270007377|gb|EFA03825.1| hypothetical protein TcasGA2_TC013940 [Tribolium castaneum]
          Length = 374

 Score =  214 bits (546), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 9/180 (5%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
             + + + +L        + P++Y   W+KY  A  + W   EV +  DL  WK+K  L 
Sbjct: 49  EFDPELEPLLQENPRRFVVFPIQYPDIWDKYKQAEASFWTTEEVDLSKDLDDWKNK--LN 106

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
            DER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +I
Sbjct: 107 SDERYFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAIENIHSEMYSMLI 166

Query: 136 TSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
            +   +  E   LFN    +P +  KA+WAL +  + ++     + +R  +      + F
Sbjct: 167 ETYISEPQEKEFLFNAIETLPCVKKKADWALLWINSKNA----TFGERIVAFAAVEGIFF 222


>gi|194673004|ref|XP_607398.4| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 1 [Bos
           taurus]
 gi|297482473|ref|XP_002692807.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like [Bos
           taurus]
 gi|296480530|gb|DAA22645.1| ribonucleotide reductase M2 polypeptide-like [Bos taurus]
          Length = 351

 Score =  214 bits (546), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 49/185 (26%), Positives = 80/185 (43%), Gaps = 10/185 (5%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
              E     D++ +L   S    + P++Y   W+ Y  A  + W   EV +  DL  W  
Sbjct: 21  DTNENEAKSDEEPLLRKSSRRFVIFPIQYPDIWKMYKKAQASFWTAEEVDLSKDLPHW-- 78

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            N L  +E+  I   L FFA+S+ +V  N+V    + +  PE R +   Q   E VHS  
Sbjct: 79  -NKLKSEEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEM 137

Query: 131 FQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILT 187
           +  +I +   D  +   LFN    +P +  KA+WAL++     S     + +R  +    
Sbjct: 138 YSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKS----TFGERVVAFAAV 193

Query: 188 RSLRF 192
             + F
Sbjct: 194 EGIFF 198


>gi|297209|emb|CAA48969.1| C8L [Variola virus]
 gi|745144|prf||2015436AF C8L gene
          Length = 333

 Score =  214 bits (546), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 11/179 (6%)

Query: 17  VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           VN+  + +L    +   + P++Y   W  Y  A  + W   EV +  D+  W   N LT 
Sbjct: 11  VNLVMEPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTP 67

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
           DE+  IK  L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  +I 
Sbjct: 68  DEKYFIKHVLAFFAASDGIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLID 127

Query: 137 SLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           +   D  E   LFN    +P +  KA+WA ++    +      + +R  +      + F
Sbjct: 128 TYVKDSNEKNYLFNAIETMPCVKKKADWAQKWIHDSAG-----YGERLIAFAAVEGIFF 181


>gi|1808636|emb|CAA64118.1| G4L protein [Cowpox virus]
          Length = 319

 Score =  214 bits (545), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 11/174 (6%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    +   + P++Y   W  Y  A  + W   EV +  D+  W   N LT DE+  
Sbjct: 2   EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPDEKYF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  +I +   D
Sbjct: 59  IKHVLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKD 118

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             E   LFN    +P +  KA+WA ++    +      + +R  +      + F
Sbjct: 119 SNEKNYLFNAIETMPCVKKKADWAQKWIHDSAG-----YGERLIAFAAVEGIFF 167


>gi|194036959|ref|XP_001925036.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B [Sus
           scrofa]
          Length = 351

 Score =  214 bits (545), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 48/185 (25%), Positives = 79/185 (42%), Gaps = 10/185 (5%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
              E      ++ +L   S    + P++Y   W+ Y  A  + W   EV +  DL  W  
Sbjct: 21  DTSENEAKSSEEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHW-- 78

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            N L  DE+  I   L FFA+S+ +V  N+V    + +  PE R +   Q   E VHS  
Sbjct: 79  -NRLKSDEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEM 137

Query: 131 FQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILT 187
           +  +I +   D  +   LFN    +P +  KA+WAL++     +     + +R  +    
Sbjct: 138 YSLLIDTYIRDPKQREFLFNAIETMPYVKKKADWALRWIADRKA----TFGERVVAFAAV 193

Query: 188 RSLRF 192
             + F
Sbjct: 194 EGIFF 198


>gi|198420293|ref|XP_002130242.1| PREDICTED: similar to Ribonucleoside-diphosphate reductase subunit
           M2 (Ribonucleotide reductase small subunit)
           (Ribonucleotide reductase small chain) [Ciona
           intestinalis]
          Length = 393

 Score =  214 bits (545), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 10/177 (5%)

Query: 19  VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
            +++ +L        + P++Y   W+ Y  A  + W   EV +  D+  W+    L  +E
Sbjct: 71  KNEEPLLKENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDMVHWE---ALKPNE 127

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           R  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +I + 
Sbjct: 128 RKFISHVLAFFAASDGIVNENLVERFAQEVQITEARFFYGFQIAIENIHSEMYSLLINTY 187

Query: 139 GLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             D  E   LFN    +P +  KA WAL++     S S   + +R  +      + F
Sbjct: 188 IRDTHEREFLFNAIETLPCVRKKAEWALKWI----SDSESTYAERIIAFASVEGIFF 240


>gi|331245491|ref|XP_003335382.1| ribonucleoside-diphosphate reductase subunit M2 [Puccinia graminis
           f. sp. tritici CRL 75-36-700-3]
 gi|309314372|gb|EFP90963.1| ribonucleoside-diphosphate reductase subunit M2 [Puccinia graminis
           f. sp. tritici CRL 75-36-700-3]
          Length = 380

 Score =  213 bits (544), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 46/178 (25%), Positives = 74/178 (41%), Gaps = 17/178 (9%)

Query: 20  DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER 79
           D + +L        L P+KY   W  Y  A  + W   E+ +  D+  W +K  L  DE+
Sbjct: 46  DQEPLLKEDGHRFVLFPIKYHEIWASYKRAEASFWTAEEIDLSKDMHDWDNK--LNADEK 103

Query: 80  LMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
             IK  L FFA+S+ +V  N++      +   E R +   Q   E +HS  +  +I +  
Sbjct: 104 HFIKHVLAFFAASDGIVNENLIERFSGEVQVAEARCFYGFQIMMENIHSEVYSLLIDTYV 163

Query: 140 LDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            +  E   LF+    +P I  KA+WAL +               ++S    R + F  
Sbjct: 164 REPTERAHLFDAIDTIPCIRKKADWALTWI------------SDKKSTFGERLIAFAA 209


>gi|156387377|ref|XP_001634180.1| predicted protein [Nematostella vectensis]
 gi|156221260|gb|EDO42117.1| predicted protein [Nematostella vectensis]
          Length = 341

 Score =  213 bits (544), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 10/185 (5%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
              + R N +D+ +L        +LP++Y   W+ Y  A  + W   EV +  D   +  
Sbjct: 11  SRAKSRFNTEDEPLLRENPHRFVILPIQYPEIWQMYKKAEASFWTAEEVDLSKDSHDFAK 70

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              L DDER+ +   L FFA+S+ +V  N+V    + +  PE R +   Q   E +HS  
Sbjct: 71  ---LNDDERMFVSHVLAFFAASDGIVNENLVECFSQEVQIPEARCFYGFQIAIENIHSEM 127

Query: 131 FQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILT 187
           +  +I SL  D+ E   LFN    +P +  KA+WAL +     +P    + +R  +    
Sbjct: 128 YSLLIESLIKDKAEKVNLFNAIETMPCVMKKAHWALNWI----NPQRASFGERIIAFAAV 183

Query: 188 RSLRF 192
             + F
Sbjct: 184 EGIFF 188


>gi|113195221|ref|YP_717351.1| ribonucleotide reductase small subunit [Taterapox virus]
 gi|90660497|gb|ABD97610.1| ribonucleotide reductase small subunit [Taterapox virus]
          Length = 319

 Score =  213 bits (544), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 11/174 (6%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    +   + P++Y   W  Y  A  + W   EV +  D+  W   N LT DE+  
Sbjct: 2   EPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPDEKYF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  +I +   D
Sbjct: 59  IKHVLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKD 118

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             E   LFN    +P +  KA+WA ++    +      + +R  +      + F
Sbjct: 119 SNEKNYLFNAIETMPCVKKKADWAQKWIHDSAG-----YGERLIAFAAVEGIFF 167


>gi|302678465|ref|XP_003028915.1| hypothetical protein SCHCODRAFT_83117 [Schizophyllum commune H4-8]
 gi|300102604|gb|EFI94012.1| hypothetical protein SCHCODRAFT_83117 [Schizophyllum commune H4-8]
          Length = 331

 Score =  213 bits (544), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 17/179 (9%)

Query: 19  VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
             ++ +L        L P++Y   W+ Y  A  + W   E+ +  DL  W+  N + D+E
Sbjct: 4   ASEEPLLKESIRRFVLFPIQYPEIWQMYKKAEASFWTAEEMDLSKDLHDWQ--NRMNDNE 61

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           R  I   L FFA+S+ +V  N++      +  PE R +   Q   E +HS T+  +I + 
Sbjct: 62  RHFISHVLAFFAASDGIVNENLLERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTY 121

Query: 139 GLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             +  E   LFN    +P +  KA WAL++                RS    R + F  
Sbjct: 122 IREAAEREHLFNAVETIPCVARKAQWALRWIN------------DDRSSFGIRLVAFAA 168


>gi|291244313|ref|XP_002742041.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like
           [Saccoglossus kowalevskii]
          Length = 463

 Score =  213 bits (543), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 46/186 (24%), Positives = 82/186 (44%), Gaps = 10/186 (5%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           +     +    ++ +L    D   + P+KY   W+ Y  A  + W   EV +  DL  W 
Sbjct: 131 LTQATTKDLEAEETLLKPNIDRFVVFPIKYQDIWKYYKKAQASFWTVEEVDLGKDLPDW- 189

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
               L ++ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E VHS 
Sbjct: 190 --VKLKEEERRFISHVLAFFAASDGIVLENLVQRFSQEVQVAEARCFYGFQIAMENVHSE 247

Query: 130 TFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRIL 186
            +  +I +   ++ E   LF+    +P +  KA+WA+++ Q+  S     + +R  +   
Sbjct: 248 MYSLLIDAYIKEQEEKTRLFHAIDNMPCVKKKADWAIEWIQSEES----SFGERLVAFAA 303

Query: 187 TRSLRF 192
              + F
Sbjct: 304 VEGIFF 309


>gi|306478720|ref|NP_042072.2| Ribonucleoside-diphosphate reductase small chain [Variola virus]
 gi|464615|sp|P33799|RIR2_VAR67 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
          Length = 319

 Score =  213 bits (543), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 11/174 (6%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    +   + P++Y   W  Y  A  + W   EV +  D+  W   N LT DE+  
Sbjct: 2   EPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPDEKYF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  +I +   D
Sbjct: 59  IKHVLAFFAASDGIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKD 118

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             E   LFN    +P +  KA+WA ++    +      + +R  +      + F
Sbjct: 119 SNEKNYLFNAIETMPCVKKKADWAQKWIHDSAG-----YGERLIAFAAVEGIFF 167


>gi|885717|gb|AAA69333.1| C8L [Variola virus]
 gi|885826|gb|AAA69439.1| C8L [Variola virus]
 gi|94483878|gb|ABF22994.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94484081|gb|ABF23196.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94485084|gb|ABF24194.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94485286|gb|ABF24395.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94485489|gb|ABF24597.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94485894|gb|ABF25000.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94487109|gb|ABF26209.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94487515|gb|ABF26613.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94487716|gb|ABF26813.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94488123|gb|ABF27218.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94488323|gb|ABF27417.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94488523|gb|ABF27616.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94488724|gb|ABF27816.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94488925|gb|ABF28016.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94489125|gb|ABF28215.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94489324|gb|ABF28413.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94489527|gb|ABF28615.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94489726|gb|ABF28813.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94490135|gb|ABF29220.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109724070|gb|ABG43196.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109724681|gb|ABG43804.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109724885|gb|ABG44007.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109725088|gb|ABG44209.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109725293|gb|ABG44413.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109725496|gb|ABG44615.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109725700|gb|ABG44818.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109725903|gb|ABG45020.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109726107|gb|ABG45223.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109726310|gb|ABG45425.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109726513|gb|ABG45627.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635013|gb|ABU91466.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635031|gb|ABU91483.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635049|gb|ABU91500.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635067|gb|ABU91517.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635103|gb|ABU91551.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635121|gb|ABU91568.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635139|gb|ABU91585.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635158|gb|ABU91603.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635176|gb|ABU91620.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635194|gb|ABU91637.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635212|gb|ABU91654.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635230|gb|ABU91671.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635248|gb|ABU91688.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635266|gb|ABU91705.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635284|gb|ABU91722.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635320|gb|ABU91756.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635338|gb|ABU91773.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635356|gb|ABU91790.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635374|gb|ABU91807.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635392|gb|ABU91824.1| ribonucleotide reductase small subunit [Variola virus]
 gi|157739431|gb|ABU91739.1| ribonucleotide reductase small subunit [Variola virus]
          Length = 319

 Score =  213 bits (543), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 11/174 (6%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    +   + P++Y   W  Y  A  + W   EV +  D+  W   N LT DE+  
Sbjct: 2   EPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPDEKYF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  +I +   D
Sbjct: 59  IKHVLAFFAASDGIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKD 118

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             E   LFN    +P +  KA+WA ++    +      + +R  +      + F
Sbjct: 119 SNEKNYLFNAIETMPCVKKKADWAQKWIHDSAG-----YGERLIAFAAVEGIFF 167


>gi|323098445|gb|ADX22683.1| ribonucleotide reductase small subunit [Monkeypox virus]
          Length = 319

 Score =  213 bits (543), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 43/174 (24%), Positives = 73/174 (41%), Gaps = 11/174 (6%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    +   + P++Y   W  Y  A  + W   EV +  D+  W   N LT DE+  
Sbjct: 2   EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPDEKYF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FF +S+ +V  N+       +   E R +   Q   E +HS  +  +I +   D
Sbjct: 59  IKHVLAFFXASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKD 118

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             E   LFN    +P +  KA+WA ++    +      + +R  +      + F
Sbjct: 119 SNEKNYLFNAIETMPCVKKKADWAQKWIHDSAG-----YGERLIAFAAVEGIFF 167


>gi|323098642|gb|ADX22879.1| ribonucleotide reductase small subunit [Monkeypox virus]
          Length = 319

 Score =  213 bits (543), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 6/150 (4%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    +   + P++Y   W  Y  A  + W   EV +  D+  W   N LT DE+  
Sbjct: 2   EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPDEKYF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FF +S+ +V  N+       +   E R +   Q   E +HS  +  +I +   D
Sbjct: 59  IKHVLAFFXASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKD 118

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQT 168
             E   LFN    +P +  KA+WA ++   
Sbjct: 119 SNEKNYLFNAIETMPCVKKKADWAQKWIHD 148


>gi|544843|gb|AAB29634.1| C8L product [variola virus VAR, India-1967, Peptide, 333 aa]
          Length = 333

 Score =  213 bits (542), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 46/179 (25%), Positives = 78/179 (43%), Gaps = 11/179 (6%)

Query: 17  VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           VN+  + +L    +   + P++Y   W  Y  A  + W+  EV +  D+  W   N LT 
Sbjct: 11  VNLVMEPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWIVEEVDISKDINDW---NKLTP 67

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
           DE+  IK  L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  +I 
Sbjct: 68  DEKYFIKHVLAFFAASDGIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLID 127

Query: 137 SLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           +   D  E   LFN    +P +  KA+WA ++    +      + +R  +      + F
Sbjct: 128 TYVKDSNEKNYLFNAIETMPCVKKKADWAQKWIHDSAG-----YGERLIAFAAVEGIFF 181


>gi|885759|gb|AAA69374.1| E4L [Variola virus]
 gi|5830589|emb|CAB54628.1| E4L protein [Variola minor virus]
 gi|94483674|gb|ABF22791.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94484287|gb|ABF23401.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94485692|gb|ABF24799.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94486095|gb|ABF25200.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94486298|gb|ABF25402.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94486501|gb|ABF25604.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94486703|gb|ABF25805.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94486906|gb|ABF26007.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94487312|gb|ABF26411.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94487921|gb|ABF27017.1| ribonucleotide reductase small subunit [Variola virus]
 gi|94489931|gb|ABF29017.1| ribonucleotide reductase small subunit [Variola virus]
 gi|109724476|gb|ABG43600.1| ribonucleotide reductase small subunit [Variola virus]
 gi|156635085|gb|ABU91534.1| ribonucleotide reductase small subunit [Variola virus]
          Length = 319

 Score =  213 bits (542), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 11/174 (6%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    +   + P++Y   W  Y  A  + W   EV +  D+  W   N LT DE+  
Sbjct: 2   EPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPDEKYF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  +I +   D
Sbjct: 59  IKHVLAFFAASDGIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKD 118

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             E   LFN    +P +  KA+WA ++    +      + +R  +      + F
Sbjct: 119 SNEKNYLFNAIETMPCVKKKADWAQKWIHDSAG-----YGERLIAFAAVEGIFF 167


>gi|281200507|gb|EFA74725.1| ribonucleotide reductase small subunit [Polysphondylium pallidum
           PN500]
          Length = 335

 Score =  213 bits (542), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 10/175 (5%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L    D   L P+KY   W+ Y  A  + W   E+ +  D+  W++K  L D+ER 
Sbjct: 6   EEPILKENKDRFVLFPIKYADIWQMYKKAEASFWTAEEIDLAGDIGDWENK--LNDNERH 63

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I   L FFA+S+ +V  N+       +  PE R +   Q   E +HS T+  +I +   
Sbjct: 64  FITNVLAFFAASDGIVNENLATKFMSEVQIPEARCFYGFQIAIENIHSETYSLLIDTYIK 123

Query: 141 DEG---ELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           D      +F+    +P++  KA+WAL++     S     + +R  +      + F
Sbjct: 124 DSETKRNIFHAIDTIPAVKKKADWALRWISNSKS-----FAERLVAFAAVEGIFF 173


>gi|71024571|ref|XP_762515.1| hypothetical protein UM06368.1 [Ustilago maydis 521]
 gi|46101992|gb|EAK87225.1| hypothetical protein UM06368.1 [Ustilago maydis 521]
          Length = 424

 Score =  213 bits (542), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 44/169 (26%), Positives = 74/169 (43%), Gaps = 17/169 (10%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
           S    L P+++   W+ Y  A  + W   E+ +  DL  W +K  L D+ER  I   L F
Sbjct: 101 SRRFVLFPIRFHEIWQMYKKAEASFWTAEEIDLSKDLHDWDNK--LNDNERHFISHVLAF 158

Query: 89  FASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---L 145
           FA+S+ +V  N+V      +   E R +   Q   E +HS T+  +I +   +  +   L
Sbjct: 159 FAASDGIVNENLVERFSSEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIREPEQREYL 218

Query: 146 FNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           F+    +P +  KA+WAL++               +R+    R + F  
Sbjct: 219 FDAVETIPVVKQKADWALRWI------------SDKRATFAERLVAFAA 255


>gi|156545974|ref|XP_001606963.1| PREDICTED: similar to ENSANGP00000013211 [Nasonia vitripennis]
          Length = 388

 Score =  212 bits (541), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 10/182 (5%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
               +   + +L        L P+++   W  Y  A  + W   EV +  D+A W   N 
Sbjct: 59  TPAFDPQLEPLLKENPGRFVLFPIQWPDIWHMYKKAEASFWTVEEVDLSKDMADW---NR 115

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           L D+ER  I   L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  
Sbjct: 116 LNDNERHFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQVAIENIHSEMYSL 175

Query: 134 IITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSL 190
           +I +   D  +   LFN    +P +  KANWAL +    S+     + +R  +      +
Sbjct: 176 LIDTYISDASQRQFLFNAIETLPCVAKKANWALNWISHDSA----TFAERVIAFAAVEGI 231

Query: 191 RF 192
            F
Sbjct: 232 FF 233


>gi|256421019|ref|YP_003121672.1| ribonucleoside-diphosphate reductase [Chitinophaga pinensis DSM
           2588]
 gi|256035927|gb|ACU59471.1| Ribonucleoside-diphosphate reductase [Chitinophaga pinensis DSM
           2588]
          Length = 323

 Score =  212 bits (541), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 20/181 (11%)

Query: 17  VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           +N++++ +L    D   LLP+ Y   WEKY     + W   E+ +  D+  W   N L D
Sbjct: 1   MNLENELLLKENKDRFVLLPINYPKVWEKYKQHEASFWTAEEIDLSADMKDW---NNLND 57

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
            ER  I   L FFA+S+ +V  N+ +     +  PE R +   Q   E +HS T+  +I 
Sbjct: 58  GERHFITHVLAFFAASDGIVNENLAVNFMSEVQLPEARCFYGFQIMMENIHSETYALLID 117

Query: 137 SLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           +   D  E   LF+    VP++T KA WAL++ +                    R + F 
Sbjct: 118 TYVKDPVEKDRLFHAIETVPAVTKKAKWALRWIE--------------NGNFAERLVAFA 163

Query: 194 C 194
            
Sbjct: 164 A 164


>gi|66275840|ref|YP_232925.1| ribonucleotide reductase small subunit [Vaccinia virus]
 gi|132629|sp|P11158|RIR2_VACCV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|335624|gb|AAA48244.1| F4L protein [Vaccinia virus]
 gi|335809|gb|AAA88680.1| ribonucleotide reductase (EC 1.17.4.1) small subunit [Vaccinia
           virus]
 gi|29692149|gb|AAO89322.1| ribonucleotide reductase small subunit [Vaccinia virus WR]
          Length = 319

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 11/174 (6%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    +   + P++Y   W  Y  A  + W   EV +  D+  W   N LT DE+  
Sbjct: 2   EPILAPNPNRFVIFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPDEKYF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  +I +   D
Sbjct: 59  IKHVLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKD 118

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             E   LFN    +P +  KA+WA ++    +      + +R  +      + F
Sbjct: 119 SNEKNYLFNAIETMPCVKKKADWAQKWIHDSAG-----YGERLIAFAAVEGIFF 167


>gi|132628|sp|P20493|RIR2_VACCC RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|335366|gb|AAA48018.1| putative F4L [Vaccinia virus Copenhagen]
          Length = 319

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 11/174 (6%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    +   + P++Y   W  Y  A  + W   EV +  D+  W   N LT DE+  
Sbjct: 2   EPILAPNPNRFVIFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPDEKYF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  +I +   D
Sbjct: 59  IKHVLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKD 118

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             E   LFN    +P +  KA+WA ++    +      + +R  +      + F
Sbjct: 119 SNEKNYLFNAIETMPCVKKKADWAQKWIHDSAG-----YGERLIAFAAVEGIFF 167


>gi|37551487|gb|AAQ93139.1| ribonucleotide reductase small subunit [Vaccinia virus]
 gi|38348909|gb|AAR17885.1| ribonucleotide reductase small subunit [Vaccinia virus]
 gi|88900660|gb|ABD57572.1| VACV040 [Vaccinia virus]
 gi|90819703|gb|ABD98513.1| VACV-DUKE-051 [Vaccinia virus]
          Length = 319

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 11/174 (6%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    +   + P++Y   W  Y  A  + W   EV +  D+  W   N LT DE+  
Sbjct: 2   EPILAPNPNRFVIFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPDEKYF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  +I +   D
Sbjct: 59  IKHVLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKD 118

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             E   LFN    +P +  KA+WA ++    +      + +R  +      + F
Sbjct: 119 SNEKNYLFNAIETMPCVKKKADWAQKWIHDSAG-----YGERLIAFAAVEGIFF 167


>gi|15617531|ref|NP_258331.1| RR2B [Spodoptera litura NPV]
 gi|15553267|gb|AAL01745.1|AF325155_57 ribonucleotide reductase small subunit homolog [Spodoptera litura
           NPV]
          Length = 333

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 47/178 (26%), Positives = 82/178 (46%), Gaps = 10/178 (5%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           N+ D+ +L        + P++Y   W  Y  A  + W   EV +  DL+ W   + L + 
Sbjct: 8   NMSDEPLLQENPRRFVMFPIEYPDIWNMYKKAEASFWTVEEVDLSKDLSDW---DSLKES 64

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           ER  IK  L FFA+S+ +V  N+V    + +   E R +   Q   E VHS  +  +I +
Sbjct: 65  ERNFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQVAIENVHSEMYSLLIDT 124

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
              D  E   LFN    +P+I  KA W++++ ++ ++     + +R  +      + F
Sbjct: 125 YVKDNDEKRRLFNAIETMPAIAKKAEWSIKWIKSATA----TFAERLIAFAAVEGIFF 178


>gi|311748425|ref|ZP_07722210.1| ribonucleoside-diphosphate reductase, beta subunit [Algoriphagus
           sp. PR1]
 gi|126576938|gb|EAZ81186.1| ribonucleoside-diphosphate reductase, beta subunit [Algoriphagus
           sp. PR1]
          Length = 326

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 44/179 (24%), Positives = 73/179 (40%), Gaps = 20/179 (11%)

Query: 19  VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
           +  + +L+   +   L P+++   WE Y  A  + W   E+ +  D+  WKS   L D E
Sbjct: 1   MQQEPILSENKNRFVLFPIQHADIWEYYKKAEASFWTAEEIDLGQDMVDWKS---LNDGE 57

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           R  I   L FFA+S+ +V  N+       +   E + +   Q   E +HS T+  +I + 
Sbjct: 58  RHFISHVLAFFAASDGIVNENLAEHFVAEVQYTEAKFFYGFQIAMENIHSETYSLLIDTY 117

Query: 139 GLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             D  E   LFN    +  +  KA+WAL++                      R + F  
Sbjct: 118 IKDPSERDKLFNAIEHIDCVKKKADWALRWID--------------NGNFQERLIAFAA 162


>gi|281204152|gb|EFA78348.1| ribonucleotide reductase-related protein [Polysphondylium pallidum
           PN500]
          Length = 323

 Score =  212 bits (540), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 49/177 (27%), Positives = 81/177 (45%), Gaps = 10/177 (5%)

Query: 19  VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
           + ++ +L    D   L P+K+   W+ Y  A  + W   E+ +  DL  W+ K  L D+E
Sbjct: 2   MQEEPILKENKDRFVLFPIKHQDVWKFYKKAEASFWTAEEIDLAPDLRDWQDK--LNDNE 59

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           R  I   L FFA+S+ +V  N+       +  PE R +   Q   E +HS T+  +I + 
Sbjct: 60  RYFISNVLAFFAASDGIVNENLATRFMSEVQIPEARCFYGFQIAMENIHSETYSLLIDTY 119

Query: 139 GLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             +  E   LFN    +P +  KANWAL++    +S     + +R  +      + F
Sbjct: 120 IQNPAEKTKLFNAIETIPCVQKKANWALKWISNSTS-----FAERLVAFAAVEGIFF 171


>gi|1710401|sp|P49730|RIR2_TOBAC RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleoside-diphosphate reductase R2
           subunit; AltName: Full=Ribonucleotide reductase small
           subunit
 gi|1044912|emb|CAA63194.1| ribonucleotide reductase R2 [Nicotiana tabacum]
          Length = 329

 Score =  212 bits (539), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 45/177 (25%), Positives = 71/177 (40%), Gaps = 19/177 (10%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L +  D   + P++Y   WE Y  A  + W   EV +  D   W++   LT  ER 
Sbjct: 6   EEPLLASSPDRFCMFPIQYPQIWEMYKKALASFWTAEEVDLSSDTRHWET---LTPGERH 62

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I   L FFA+S+ +V  N+     + +   E R +   Q   E +HS  +  ++ S   
Sbjct: 63  FITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLESYIK 122

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           D  E   LF      P +  KA WAL++                      R + F C
Sbjct: 123 DSDEKSRLFRAVETNPCVEKKAKWALRWIDGSE-------------TFAERLVAFAC 166


>gi|187903099|ref|YP_001883390.1| ribonucleoside diphosphate reductase small subunit, rr2 [Musca
           domestica salivary gland hypertrophy virus]
 gi|187384748|gb|ACD03521.1| ribonucleoside diphosphate reductase small subunit, rr2 [Musca
           domestica salivary gland hypertrophy virus]
          Length = 343

 Score =  212 bits (539), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 43/184 (23%), Positives = 82/184 (44%), Gaps = 10/184 (5%)

Query: 12  AGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSK 71
           A +  ++  ++ +L        L P++Y   W  Y  A  + W   EV +  D+  W+  
Sbjct: 7   ANQIEMDTSNEPLLQENPRRFVLFPIEYEDIWRMYKKAEASFWTVEEVDLSKDMNDWE-- 64

Query: 72  NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
             L+  E+  IK  L FFA+S+ +V  N++    + +   E R +   Q   E VHS  +
Sbjct: 65  -RLSSGEQHFIKHVLAFFAASDGIVNENLLERFAQEVQVSEARCFYGFQIAMENVHSEMY 123

Query: 132 QYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
             +I +   +  E   LFN    +P++  KA+WA  +  + ++     + +R  +  +  
Sbjct: 124 SVLIDTYIRERAERERLFNAIETIPAVKRKADWAFNWITSTTA----TFGERLLAFAVVE 179

Query: 189 SLRF 192
            + F
Sbjct: 180 GVFF 183


>gi|58260896|ref|XP_567858.1| ribonucleoside-diphosphate reductase [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134116993|ref|XP_772723.1| hypothetical protein CNBK0970 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255341|gb|EAL18076.1| hypothetical protein CNBK0970 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229939|gb|AAW46341.1| ribonucleoside-diphosphate reductase, putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 401

 Score =  212 bits (539), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 49/187 (26%), Positives = 81/187 (43%), Gaps = 17/187 (9%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
             G+      D+ +L   +    L P+KY   W+ Y  A  + W   E+ +  DL  W++
Sbjct: 63  FVGDLDCEEKDEPLLKETNARFVLFPIKYHEIWQMYKKAQASFWTAEEINLAPDLHDWEN 122

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
           K  L D+ER  I+  L FFA+S+ +V  N+V      +   E + +   Q   E +H+ T
Sbjct: 123 K--LNDNERYFIEHVLAFFAASDGIVNENLVERFSAEVQAAEAKSFYGFQIMMENIHAET 180

Query: 131 FQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILT 187
           +  +I +   D      LF+    +P I  KA+WAL++               +RS    
Sbjct: 181 YSLLIDTYIKDTARRNFLFDAIDTIPCIRKKADWALRWI------------SDKRSCFGE 228

Query: 188 RSLRFLC 194
           R + F  
Sbjct: 229 RLIAFAA 235


>gi|15229476|ref|NP_189000.1| RNR2A (RIBONUCLEOTIDE REDUCTASE 2A); ribonucleoside-diphosphate
           reductase [Arabidopsis thaliana]
 gi|27735240|sp|P50651|RIR2A_ARATH RecName: Full=Ribonucleoside-diphosphate reductase small chain A;
           AltName: Full=Ribonucleoside-diphosphate reductase R2A
           subunit; Short=AtRNR2; Short=Protein R2at; AltName:
           Full=Ribonucleotide reductase small subunit A
 gi|13937232|gb|AAK50108.1|AF372971_1 AT3g23580/MDB19_7 [Arabidopsis thaliana]
 gi|9294514|dbj|BAB02776.1| ribonucleotide reductase [Arabidopsis thaliana]
 gi|23505945|gb|AAN28832.1| At3g23580/MDB19_7 [Arabidopsis thaliana]
          Length = 341

 Score =  212 bits (539), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 50/192 (26%), Positives = 80/192 (41%), Gaps = 19/192 (9%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
            L   Q  +      ++ +L A++    + P++Y   WE Y  A  + W   EV +  D+
Sbjct: 3   SLKEGQGRDMEEGESEEPLLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTAEEVDLSTDV 62

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             W+    LTD E+  I   L FFA+S+ +V  N+       +  PE R +   Q   E 
Sbjct: 63  QQWE---ALTDSEKHFISHILAFFAASDGIVLENLAARFLNDVQVPEARAFYGFQIAMEN 119

Query: 126 VHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRR 182
           +HS  +  ++ +   D  E   LFN    +P I+ KA W L + Q+  S           
Sbjct: 120 IHSEMYSLLLETFIKDSKEKDRLFNAIETIPCISKKAKWCLDWIQSPMS----------- 168

Query: 183 SRILTRSLRFLC 194
                R + F C
Sbjct: 169 --FAVRLVAFAC 178


>gi|112489977|pdb|2ANI|A Chain A, Crystal Structure Of The F127y Mutant Of Ribonucleotide
           Reductase R2 From Chlamydia Trachomatis
          Length = 346

 Score =  211 bits (538), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 94/185 (50%), Positives = 132/185 (71%), Gaps = 2/185 (1%)

Query: 10  IQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           +   +KRVN++ KR++N    DVNQL+P+KY WAWE YL+ C N+W+PTE+PM  D+ LW
Sbjct: 6   LDGKQKRVNLNSKRLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEIPMGKDIELW 65

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           KS + L++DER +I  NLGFF+++ESLV NNIVLAI++H++NPE RQYLLRQAFEEAVH+
Sbjct: 66  KS-DRLSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHT 124

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
           HT+ YI  SLGLDE E+FN Y E  +I AK ++ ++ T  +  P+F   +       +  
Sbjct: 125 HTYLYICESLGLDEKEIFNAYNERAAIKAKDDFQMEITGKVLDPNFRTDSVEGLQEFVKN 184

Query: 189 SLRFL 193
            + + 
Sbjct: 185 LVGYY 189


>gi|255724184|ref|XP_002547021.1| hypothetical protein CTRG_01327 [Candida tropicalis MYA-3404]
 gi|240134912|gb|EER34466.1| hypothetical protein CTRG_01327 [Candida tropicalis MYA-3404]
          Length = 252

 Score =  211 bits (538), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 49/177 (27%), Positives = 79/177 (44%), Gaps = 17/177 (9%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L        + P+KY   W  Y  A  + W   EV +  DL  W +K  L D+ER 
Sbjct: 89  EEPLLQENKRRYVMFPIKYHEIWNFYKKAEASFWTCEEVDLSKDLDDWNNK--LNDNERY 146

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            + R L FFA+S+ +V  N++      + +PE + +   Q   E +HS  +  +I +   
Sbjct: 147 FVSRVLAFFAASDGIVGENLIENFSAEVQSPEAKSFYGFQIMMENIHSEMYSLLIETYVK 206

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           D  E   LFN    +P IT KA WA+++ Q             + +    R + F C
Sbjct: 207 DPQEADFLFNAIENIPCITKKAEWAIKWIQ------------DKDALYAERLVAFCC 251


>gi|156387375|ref|XP_001634179.1| predicted protein [Nematostella vectensis]
 gi|156221259|gb|EDO42116.1| predicted protein [Nematostella vectensis]
          Length = 384

 Score =  211 bits (538), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 51/195 (26%), Positives = 86/195 (44%), Gaps = 10/195 (5%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           M ++         + R N +D+ +L        +LP++Y   W+ Y  A  + W   EV 
Sbjct: 44  MVSDRTPPKKSRAKSRFNTEDEPLLRENPHRFVILPIQYTEIWQMYKKAEASFWTAEEVD 103

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           +  D   +     L D ER+ +   L FFA+S+ +V  N+V    + +  PE R +   Q
Sbjct: 104 LSKDSHDFAK---LNDHERMFVSHVLAFFAASDGIVNENLVECFCQEVQIPEARCFYGFQ 160

Query: 121 AFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYW 177
              E +HS  +  +I SL  D+ E   LFN    +P +  KA+WAL +     +P    +
Sbjct: 161 IAIENIHSEMYSLLIESLIKDKAEKVNLFNAIETMPCVMKKAHWALNWI----NPQRASF 216

Query: 178 NKRRRSRILTRSLRF 192
            +R  +      + F
Sbjct: 217 GERIIAFAAVEGIFF 231


>gi|255079598|ref|XP_002503379.1| predicted protein [Micromonas sp. RCC299]
 gi|226518645|gb|ACO64637.1| predicted protein [Micromonas sp. RCC299]
          Length = 335

 Score =  211 bits (538), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 19/188 (10%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
            ++    V    + +L+   D   + P+KYG  WE Y  A  + W   EV + DD+  W 
Sbjct: 3   AESNNNEVAKVAEPLLDPNDDRFTMFPIKYGDIWEMYKKAEASFWTAEEVDLSDDMVHW- 61

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
             N L +DE+  IK  L FFA+S+ +V  N+ +     +  PE R +   Q   E +HS 
Sbjct: 62  --NKLNNDEKHFIKHILAFFAASDGIVLENLGVRFMGEVQFPEARAFYGFQIAIENIHSE 119

Query: 130 TFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRIL 186
            +  +I +   D  E   LF   + +P I  KA+WA ++ ++ +                
Sbjct: 120 MYSLLIDAYVKDAQEKTYLFQAIQNIPCIAKKADWAFKWIESSAD-------------FA 166

Query: 187 TRSLRFLC 194
            R + F C
Sbjct: 167 ERLIAFAC 174


>gi|300706309|ref|XP_002995432.1| hypothetical protein NCER_101672 [Nosema ceranae BRL01]
 gi|239604534|gb|EEQ81761.1| hypothetical protein NCER_101672 [Nosema ceranae BRL01]
          Length = 325

 Score =  211 bits (537), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 52/176 (29%), Positives = 79/176 (44%), Gaps = 18/176 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +LN   +   L P+KY   W+ Y  A ++ W   EV +  D   W S   L D ER  
Sbjct: 8   EPLLNPNEERYVLFPIKYHDIWQMYKKAESSFWTVEEVDLTADRNDWLS---LNDKERYF 64

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           I   L FFA+S+ +V  N+V      ++  E + +   Q   E +HS  +  +I +   D
Sbjct: 65  ISNILAFFAASDGIVNANLVERFANEVTILEAKCFYGFQVAIENIHSEMYSLLIDAYITD 124

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + E   LFN    +P I  KA+WAL++             K  +S   TR + F C
Sbjct: 125 QDEKTHLFNAISTIPCIKKKADWALKWI------------KDEKSSFATRVIAFAC 168


>gi|18640273|ref|NP_570429.1| CMLV039 [Camelpox virus]
 gi|18482949|gb|AAL73746.1|AF438165_36 ribonucleotide reductase small subunit [Camelpox virus M-96]
 gi|19717972|gb|AAG37497.1| CMP39L [Camelpox virus CMS]
          Length = 319

 Score =  211 bits (537), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 43/174 (24%), Positives = 74/174 (42%), Gaps = 11/174 (6%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    +   + P++Y   W  Y  A  + W   EV +  D+  W   N LT +E+  
Sbjct: 2   EPILAKNQNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKLTPNEKYF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  +I +   D
Sbjct: 59  IKHVLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKD 118

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             E   LFN    +P +  KA+WA ++    +      + +R  +      + F
Sbjct: 119 SNEKNYLFNAIETMPCVKKKADWAQKWIHDSAG-----YGERLIAFAAVEGIFF 167


>gi|297831106|ref|XP_002883435.1| RNR2/RNR2A [Arabidopsis lyrata subsp. lyrata]
 gi|297329275|gb|EFH59694.1| RNR2/RNR2A [Arabidopsis lyrata subsp. lyrata]
          Length = 341

 Score =  211 bits (537), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 50/192 (26%), Positives = 80/192 (41%), Gaps = 19/192 (9%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
            L   Q  +   +   + +L A++    + P++Y   WE Y  A  + W   EV +  D+
Sbjct: 3   SLKESQRRDMDEDESKEPLLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTAEEVDLSTDV 62

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             W+    LTD E+  I   L FFA+S+ +V  N+       +  PE R +   Q   E 
Sbjct: 63  QQWE---ALTDSEKHFISHVLAFFAASDGIVLENLAARFLNDVQVPEARAFYGFQIAMEN 119

Query: 126 VHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRR 182
           +HS  +  ++ +   D  E   LFN    +P I+ KA W L + Q+  S           
Sbjct: 120 IHSEMYSLLLETFLKDSKEKDRLFNAIETIPCISKKAKWCLDWIQSPMS----------- 168

Query: 183 SRILTRSLRFLC 194
                R + F C
Sbjct: 169 --FAVRLVAFAC 178


>gi|299747484|ref|XP_001837064.2| ribonucleotide reductase small subunit [Coprinopsis cinerea
           okayama7#130]
 gi|298407540|gb|EAU84681.2| ribonucleotide reductase small subunit [Coprinopsis cinerea
           okayama7#130]
          Length = 379

 Score =  211 bits (537), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 52/186 (27%), Positives = 77/186 (41%), Gaps = 18/186 (9%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
             GE  +   ++ +L        L P++Y   W  Y  A  + W   E+ +  D+  W  
Sbjct: 44  FVGEVDLPESEEPLLKPSPKRLTLYPIQYPEIWTHYKRAQASFWTAEEIDLSHDMMDW-- 101

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            + LT+ ER  + R L FFASS+ +V  N+V      +  PE R +   Q   E VHS T
Sbjct: 102 -SKLTNAERHFLSRILAFFASSDGIVNENLVERFSSEVQVPEARCFYGFQVMIENVHSET 160

Query: 131 FQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILT 187
           +  +I +   D  E   LF     +PSI  KA WAL             W   + +    
Sbjct: 161 YSLLIDTYIKDPEERDFLFRAIETIPSIQRKAEWAL------------TWTSDKSTTFAE 208

Query: 188 RSLRFL 193
           R + F 
Sbjct: 209 RLVAFA 214


>gi|86132508|ref|ZP_01051102.1| ribonucleoside-diphosphate reductase small chain [Dokdonia
           donghaensis MED134]
 gi|85817069|gb|EAQ38253.1| ribonucleoside-diphosphate reductase small chain [Dokdonia
           donghaensis MED134]
          Length = 328

 Score =  211 bits (537), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 19/176 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    D   + P+++   WE Y  +  + W   E+ +  DL  WK K  LTDDER  
Sbjct: 5   EPILAENKDRFVIFPIQHDDIWEWYKKSEASFWTAEEIDLHQDLVDWKGK--LTDDERYF 62

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+       +   E + +   Q   E +HS T+  +I +   D
Sbjct: 63  IKHILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKD 122

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           E E   LFN     P+I  KA+WAL++  + S                 R + F  
Sbjct: 123 EVEKDKLFNALENFPAIKKKADWALKWIDSPS--------------FAERLIAFAA 164


>gi|4894211|gb|AAD32302.1| ribonucleotide reductase small subunit [Glycine max]
          Length = 339

 Score =  210 bits (536), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 19/186 (10%)

Query: 12  AGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSK 71
            G  +   + + +L  +S    + P++Y   WE Y  A  + W   EV +  D+  W++ 
Sbjct: 7   NGVDKARDEQEPILMEQSQRFCMFPIRYKQIWEMYKKAEASFWTAEEVDLSYDVQHWET- 65

Query: 72  NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
             L+  E+  I   L FFA+S+ +V  N+       +  PE R +   Q   E +HS  +
Sbjct: 66  --LSVSEKHFITHVLAFFAASDGIVLENLAARFLSDVQIPEARAFYGFQIAMENIHSEMY 123

Query: 132 QYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
             ++ +   D  E   LFN    +P +  KA WAL +  + +S                R
Sbjct: 124 SLLLETYIKDSREKHKLFNAIENLPCVARKAEWALSWIHSSTS-------------FAER 170

Query: 189 SLRFLC 194
            + F C
Sbjct: 171 LVAFAC 176


>gi|254586079|ref|XP_002498607.1| ZYRO0G14388p [Zygosaccharomyces rouxii]
 gi|238941501|emb|CAR29674.1| ZYRO0G14388p [Zygosaccharomyces rouxii]
          Length = 412

 Score =  210 bits (535), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 5/154 (3%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           D+ +L        L P+KY   W+ Y  A  + W   E+ +  DL  W +K  +++ ER 
Sbjct: 88  DEPLLVENKRRFVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDLDDWNNK--MSEGERY 145

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I R L FFA+S+ +V  N+V      +  PE + +   Q   E +HS T+  +I +   
Sbjct: 146 FISRVLAFFAASDGIVNENLVENFSAEVQIPEAKCFYGFQIMMENIHSETYSLLIDTYSR 205

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           D  E   LFN    +P I  KA WA+++ Q  ++
Sbjct: 206 DTEESEFLFNAIENIPPIKEKAEWAIRWIQDDTA 239


>gi|303278144|ref|XP_003058365.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226459525|gb|EEH56820.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 338

 Score =  210 bits (535), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 19/169 (11%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
           S+   + P+KYG  WE Y  A  + W   EV + DD+  W+    L+DDE+  I   L F
Sbjct: 22  SERFTMFPIKYGDIWEMYKKAEASFWTAEEVDLSDDMKHWEK---LSDDEKHFISHILAF 78

Query: 89  FASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---L 145
           FA+S+ +V  N+ +     +  PE R +   Q   E +HS  +  +I +   D  +   L
Sbjct: 79  FAASDGIVLENLGVRFMGEVQIPEARAFYGFQIAIENIHSEMYSLLIDAYIKDAAQKKYL 138

Query: 146 FNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           F     +P +  KA+WAL++ ++ +                 R + F C
Sbjct: 139 FEAMENIPCVAKKADWALKWIESSA-------------TFAERLIAFAC 174


>gi|76789573|ref|YP_328659.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis A/HAR-13]
 gi|237803260|ref|YP_002888454.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis B/Jali20/OT]
 gi|237805181|ref|YP_002889335.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis B/TZ1A828/OT]
 gi|255349232|ref|ZP_05381239.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis 70]
 gi|255503769|ref|ZP_05382159.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis 70s]
 gi|255507450|ref|ZP_05383089.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis D(s)2923]
 gi|76168103|gb|AAX51111.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis A/HAR-13]
 gi|231273481|emb|CAX10397.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis B/TZ1A828/OT]
 gi|231274494|emb|CAX11290.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis B/Jali20/OT]
 gi|289525874|emb|CBJ15356.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis Sweden2]
 gi|296435459|gb|ADH17637.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis E/150]
 gi|296439176|gb|ADH21329.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis E/11023]
          Length = 346

 Score =  210 bits (535), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 95/185 (51%), Positives = 132/185 (71%), Gaps = 2/185 (1%)

Query: 10  IQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           +   +KRVN++ KR++N    DVNQL+P+KY WAWE YL+ C N+W+PTE+PM  D+ LW
Sbjct: 6   LDGKQKRVNLNSKRLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEIPMGKDIELW 65

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           KS + L++DER +I  NLGFF+++ESLV NNIVLAI++H++NPE RQYLLRQAFEEAVH+
Sbjct: 66  KS-DRLSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHT 124

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
           HTF YI  SLGLDE E+FN Y E  +I AK ++ ++ T  +  P+F   +       +  
Sbjct: 125 HTFLYICESLGLDEKEIFNAYNERAAIKAKDDFQMEITGKVLDPNFRTDSVEGLQEFVKN 184

Query: 189 SLRFL 193
            + + 
Sbjct: 185 LVGYY 189


>gi|115466138|ref|NP_001056668.1| Os06g0127900 [Oryza sativa Japonica Group]
 gi|55296211|dbj|BAD67929.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group]
 gi|113594708|dbj|BAF18582.1| Os06g0127900 [Oryza sativa Japonica Group]
 gi|186920368|gb|ACC95437.1| ribonucleotide diphosphate reductase small subunit 2 [Oryza sativa
           Japonica Group]
 gi|215706414|dbj|BAG93270.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222634884|gb|EEE65016.1| hypothetical protein OsJ_19968 [Oryza sativa Japonica Group]
          Length = 345

 Score =  210 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 18/177 (10%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L   SD   + P++Y   WE Y  A  + W   EV +  D   W     L+ DER 
Sbjct: 20  EEPLLAESSDRFSMFPIRYPQIWEFYKKAVASFWTAEEVDLSADARHWD--AALSPDERH 77

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            +   L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  ++ +   
Sbjct: 78  FVSHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIR 137

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           D+ E   LF     VP++  KA+WA+++                  R   R + F C
Sbjct: 138 DDVEKDRLFRAIDTVPAVRRKADWAMRWIDGGE-------------RFAERLVAFAC 181


>gi|218197485|gb|EEC79912.1| hypothetical protein OsI_21460 [Oryza sativa Indica Group]
          Length = 345

 Score =  210 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 45/177 (25%), Positives = 73/177 (41%), Gaps = 18/177 (10%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L   SD   + P++Y   WE Y  A  + W   EV +  D   W     L+ DER 
Sbjct: 20  EEPLLAESSDRFSMFPIRYPQIWEFYKKAVASFWTAEEVDLSADARHWD--AALSPDERH 77

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            +   L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  ++ +   
Sbjct: 78  FVSHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIR 137

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           D  E   LF     VP++  KA+WA+++                  R   R + F C
Sbjct: 138 DGAEKDRLFRAIDTVPAVRRKADWAMRWIDGGE-------------RFAERLVAFAC 181


>gi|145537171|ref|XP_001454302.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124422057|emb|CAK86905.1| unnamed protein product [Paramecium tetraurelia]
          Length = 507

 Score =  210 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 53/195 (27%), Positives = 80/195 (41%), Gaps = 21/195 (10%)

Query: 5   TGLSPIQAGEKRVNVD--DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           T LS +Q  +  V  +  D+ +L    +   L P+KY   W  Y     + W   E+ + 
Sbjct: 170 TPLSNLQTSQPVVQQNECDEPLLKQNPNRFVLFPIKYNDIWNMYKQHKASFWTAEEIDLY 229

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            DL  W+    LT DE+  IK  L FFA+S+ +V  N+       +  PE R +   Q  
Sbjct: 230 QDLKDWEK---LTADEKHFIKYVLAFFAASDGIVNENLAQQFCTEVQVPEARCFYGFQIA 286

Query: 123 EEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNK 179
            E +HS T+  +I +   DE E   L +    VP I  KA WA+++              
Sbjct: 287 MENIHSETYSLLIDTYITDENEKNYLLHAIDNVPVIQKKAMWAMKWIN------------ 334

Query: 180 RRRSRILTRSLRFLC 194
                   R + F  
Sbjct: 335 -NNDSFAERLIAFAA 348


>gi|2465173|emb|CAA71741.1| ribonucleotide reductase (Class I) [Trypanosoma brucei brucei]
          Length = 337

 Score =  210 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 49/177 (27%), Positives = 81/177 (45%), Gaps = 19/177 (10%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L    D   + P+KY   W+KY  A ++ W   E+ + +D+  W+    L D ER 
Sbjct: 16  EEPLLTENPDRYVIFPIKYPDIWQKYKKAESSIWTVEEIDLGNDMTDWEK---LDDGERH 72

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            IK  L FFA+S+ +V  N+       +  PE R +   Q   E +HS T+  +I +  +
Sbjct: 73  FIKHVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHSETYSVLIDTYVV 132

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           D  E   L +  R +P I  KA WA+++  + +S               TR + F  
Sbjct: 133 DPDEKQRLLHAIRTIPCIEKKAKWAIEWIGSQTS-------------FPTRLVAFAA 176


>gi|266919|sp|P29883|RIR2_VACCP RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|335710|gb|AAA48294.1| F14 [Vaccinia virus]
          Length = 319

 Score =  210 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 42/174 (24%), Positives = 74/174 (42%), Gaps = 11/174 (6%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    +   + P++Y   W  Y  A  + W   EV +  D+  W   N +T DE+  
Sbjct: 2   EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDW---NKVTPDEKYF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+       +   E R +   +   E +HS  +  +I +   D
Sbjct: 59  IKHVLAFFAASDGIVNENLAERFCTEVQITEARCFYGFRMAIENIHSEMYSLLIDTYVKD 118

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             E   LFN    +P +  KA+WA ++    +      + +R  +      + F
Sbjct: 119 SNEKNYLFNAIETMPCVKKKADWAQKWIHDSAG-----YGERLIAFAAVEGIFF 167


>gi|326797773|ref|YP_004315592.1| ribonucleoside-diphosphate reductase [Sphingobacterium sp. 21]
 gi|326548537|gb|ADZ76922.1| Ribonucleoside-diphosphate reductase [Sphingobacterium sp. 21]
          Length = 323

 Score =  210 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 45/181 (24%), Positives = 75/181 (41%), Gaps = 20/181 (11%)

Query: 17  VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           ++ +++ +L    D   +LP+ Y   W+ Y     + W   E+ +  DL  W +   L D
Sbjct: 1   MSQENEVLLRENKDRFVILPINYPAIWDMYKKHEASFWTAEEIDLSGDLKDWAN---LND 57

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
            ER  I   L FFA+S+ +V  N+ +     +  PE R +   Q   E +HS T+  +I 
Sbjct: 58  GERHFISHVLAFFAASDGIVNENLAINFMSEVQLPEARSFYGFQIAMENIHSETYALLID 117

Query: 137 SLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           +   D  E   LF+    V  +  KA WAL++ +                    R + F 
Sbjct: 118 TYVKDPVEKDRLFHAIETVECVKKKAEWALRWIE--------------NGSFAERLVAFA 163

Query: 194 C 194
            
Sbjct: 164 A 164


>gi|321263777|ref|XP_003196606.1| ribonucleoside-diphosphate reductase [Cryptococcus gattii WM276]
 gi|317463083|gb|ADV24819.1| Ribonucleoside-diphosphate reductase, putative [Cryptococcus gattii
           WM276]
          Length = 401

 Score =  210 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 49/187 (26%), Positives = 81/187 (43%), Gaps = 17/187 (9%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
             G+      D+ +L   +    L P+KY   W+ Y  A  + W   E+ +  DL  W++
Sbjct: 63  FVGDLDCEEKDEPLLKETNARFVLFPIKYHEIWQMYKKAQASFWTAEEINLAPDLHDWEN 122

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
           K  L D+ER  I+  L FFA+S+ +V  N+V      +   E + +   Q   E +H+ T
Sbjct: 123 K--LNDNERYFIEHVLAFFAASDGIVNENLVERFSAEVQAAEAKSFYGFQIMMENIHAET 180

Query: 131 FQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILT 187
           +  +I +   D      LF+    +P I  KA+WAL++               +RS    
Sbjct: 181 YSLLIDTYIKDTARRNFLFDAMDTIPCIRKKADWALRWI------------SDKRSCFGE 228

Query: 188 RSLRFLC 194
           R + F  
Sbjct: 229 RLIAFAA 235


>gi|68481406|ref|XP_715342.1| hypothetical protein CaO19.5801 [Candida albicans SC5314]
 gi|68481537|ref|XP_715277.1| hypothetical protein CaO19.13223 [Candida albicans SC5314]
 gi|46436893|gb|EAK96248.1| hypothetical protein CaO19.13223 [Candida albicans SC5314]
 gi|46436961|gb|EAK96315.1| hypothetical protein CaO19.5801 [Candida albicans SC5314]
 gi|238882096|gb|EEQ45734.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
           albicans WO-1]
          Length = 413

 Score =  210 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 9/175 (5%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L        + P++Y   W  Y  A  + W   E+ +  DL  W +K  L ++ER 
Sbjct: 89  EEPLLVENKRRYVMFPIRYHEIWNFYKKAEASFWTAEEIDLSKDLDDWNNK--LNENERY 146

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I R L FFA+S+ +V  N++      +  PE + +   Q   E +HS T+  +I +   
Sbjct: 147 FISRVLAFFAASDGIVGENLIENFSTEVQLPEAKSFYGFQIMMENIHSETYSLLIETYIK 206

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           D  E   LFN    +P I  KA+WA+++ Q   +     + +R  +      + F
Sbjct: 207 DPQEADYLFNAIANIPCIQKKADWAIKWIQDDEA----LYGERLVAFAAVEGIFF 257


>gi|298243909|ref|ZP_06967716.1| Ribonucleoside-diphosphate reductase [Ktedonobacter racemifer DSM
           44963]
 gi|297556963|gb|EFH90827.1| Ribonucleoside-diphosphate reductase [Ktedonobacter racemifer DSM
           44963]
          Length = 361

 Score =  210 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 100/191 (52%), Positives = 126/191 (65%), Gaps = 2/191 (1%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNA-RSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           NT  +             KR++N    DVNQL+PLKY WAWE YL+ C NHWMPTEVPM 
Sbjct: 14  NTTSTANTPPASEQQAQKKRLINGWHVDVNQLMPLKYRWAWEHYLNGCANHWMPTEVPMT 73

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D+  W+S N LT  ERL+I RNLGFFA++ESLV NN+VLAI++H++N ECRQYLLRQAF
Sbjct: 74  KDIETWRS-NKLTAGERLVIMRNLGFFATAESLVGNNLVLAIFKHITNAECRQYLLRQAF 132

Query: 123 EEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRR 182
           EEA+H+HTF YI+ SLGL E E+FNMY E+PSI  K  + +Q T  +  P F        
Sbjct: 133 EEAIHTHTFLYIVESLGLSEHEVFNMYHEIPSIKEKDEFEMQLTSAVLDPDFSTETFEGM 192

Query: 183 SRILTRSLRFL 193
            + L   + + 
Sbjct: 193 QKFLQNLIGYY 203


>gi|212274629|ref|NP_001130908.1| hypothetical protein LOC100192012 [Zea mays]
 gi|195636980|gb|ACG37958.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
          Length = 339

 Score =  210 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 46/176 (26%), Positives = 72/176 (40%), Gaps = 18/176 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L   SD   + P++Y   WE Y  A  + W   EV +  D   W     L+ DER  
Sbjct: 15  EPLLAESSDRFSMFPIRYPQIWEFYKKAVASFWTAEEVDLSADARHWD--AALSPDERHF 72

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           I   L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  ++ +   D
Sbjct: 73  ISHVLAFFAASDGIVLENLASRFMSDVQAAEARAFYGFQIAIENIHSEMYSLLLETYIRD 132

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             E   LF     VP++  KA+WA+++                  R   R + F C
Sbjct: 133 GTEKDRLFRAIETVPAVRRKADWAMRWIDGGE-------------RFAERLVAFAC 175


>gi|255037048|ref|YP_003087669.1| Ribonucleoside-diphosphate reductase [Dyadobacter fermentans DSM
           18053]
 gi|254949804|gb|ACT94504.1| Ribonucleoside-diphosphate reductase [Dyadobacter fermentans DSM
           18053]
          Length = 331

 Score =  210 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 6/150 (4%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L        L P+K+   WE Y     + W   E+ +  D+  W++   L+D ER  
Sbjct: 9   EPLLTEDPLRFVLFPIKHSDIWEMYKRHEASFWTAEEIDLSQDMKDWEN---LSDGERHF 65

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           I   L FFA+S+ +V  N+ +     +   E + +   Q   E +HS T+  +I +   D
Sbjct: 66  ISHVLAFFAASDGIVNENLAVNFLSEVQYAEAKCFYGFQIAMENIHSETYSLLIDTYIKD 125

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQT 168
             E   L      +P +  KA+WAL++  +
Sbjct: 126 SAEKDRLLRAIETIPCVQKKADWALKWIDS 155


>gi|3914640|sp|O15910|RIR2_TRYBB RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase R2 subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|2411479|gb|AAB70705.1| ribonucleotide reductase small subunit [Trypanosoma brucei]
 gi|261335314|emb|CBH18308.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei gambiense DAL972]
          Length = 337

 Score =  210 bits (534), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 19/183 (10%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           ++    ++ +L    D   + P+KY   W+KY  A ++ W   E+ + +D+  W+    L
Sbjct: 10  RKEGEVEEPLLTENPDRYVIFPIKYPDIWQKYKEAESSIWTVEEIDLGNDMTDWEK---L 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            D ER  IK  L FFA+S+ +V  N+       +  PE R +   Q   E +HS T+  +
Sbjct: 67  DDGERHFIKHVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHSETYSVL 126

Query: 135 ITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           I +  +D  E   L +  R +P I  KA WA+++  + +S               TR + 
Sbjct: 127 IDTYVVDPDEKQRLLHAIRTIPCIEKKAKWAIEWIGSQTS-------------FPTRLVA 173

Query: 192 FLC 194
           F  
Sbjct: 174 FAA 176


>gi|166154172|ref|YP_001654290.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis 434/Bu]
 gi|166155047|ref|YP_001653302.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis L2b/UCH-1/proctitis]
 gi|301335416|ref|ZP_07223660.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis L2tet1]
 gi|165930160|emb|CAP03644.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis 434/Bu]
 gi|165931035|emb|CAP06598.1| ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis L2b/UCH-1/proctitis]
          Length = 346

 Score =  209 bits (533), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 95/185 (51%), Positives = 132/185 (71%), Gaps = 2/185 (1%)

Query: 10  IQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           +   +KRVN++ KR++N    DVNQL+P+KY WAWE YL+ C N+W+PTE+PM  D+ LW
Sbjct: 6   LDGKQKRVNLNSKRLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEIPMGKDIELW 65

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           KS + L++DER +I  NLGFF+++ESLV NNIVLAI++H++NPE RQYLLRQAFEEAVH+
Sbjct: 66  KS-DRLSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHT 124

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
           HTF YI  SLGLDE E+FN Y E  +I AK ++ ++ T  +  P+F   +       +  
Sbjct: 125 HTFLYICESLGLDEKEIFNAYNERAAIKAKDDFQMEITGKVLDPNFRTDSVEGLQEFVKN 184

Query: 189 SLRFL 193
            + + 
Sbjct: 185 LVGYY 189


>gi|74025550|ref|XP_829341.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
 gi|70834727|gb|EAN80229.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
 gi|261335315|emb|CBH18309.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei gambiense DAL972]
          Length = 337

 Score =  209 bits (533), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 19/183 (10%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           ++    ++ +L    D   + P+KY   W+KY  A ++ W   E+ + +D+  W+    L
Sbjct: 10  RKEGEVEEPLLTENPDRYVIFPIKYPDIWQKYKEAESSIWTVEEIDLGNDMTDWEK---L 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            D ER  IK  L FFA+S+ +V  N+       +  PE R +   Q   E +HS T+  +
Sbjct: 67  DDGERHFIKHVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHSETYSVL 126

Query: 135 ITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           I +  +D  E   L +  R +P I  KA WA+++  + +S               TR + 
Sbjct: 127 IDTYVVDPDEKQRLLHAIRTIPCIEKKAKWAIEWIGSQTS-------------FPTRLVA 173

Query: 192 FLC 194
           F  
Sbjct: 174 FAA 176


>gi|194690416|gb|ACF79292.1| unknown [Zea mays]
 gi|194704028|gb|ACF86098.1| unknown [Zea mays]
 gi|195619132|gb|ACG31396.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
 gi|223943167|gb|ACN25667.1| unknown [Zea mays]
          Length = 339

 Score =  209 bits (533), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 46/176 (26%), Positives = 72/176 (40%), Gaps = 18/176 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L   SD   + P++Y   WE Y  A  + W   EV +  D   W     L+ DER  
Sbjct: 15  EPLLAESSDRFSMFPIRYPQIWEFYKKAVASFWTAEEVDLSADARHWD--AALSPDERHF 72

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           I   L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  ++ +   D
Sbjct: 73  ISHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIRD 132

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             E   LF     VP++  KA+WA+++                  R   R + F C
Sbjct: 133 GTEKDRLFRAIETVPAVRRKADWAMRWIDGGE-------------RFAERLVAFAC 175


>gi|74025552|ref|XP_829342.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
 gi|70834728|gb|EAN80230.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
          Length = 337

 Score =  209 bits (533), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 19/183 (10%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           ++    ++ +L    D   + P+KY   W+KY  A ++ W   E+ + +D+  W+    L
Sbjct: 10  RKEGEVEEPLLTENPDRYVIFPIKYPDIWQKYKEAESSIWTVEEIDLGNDMTDWEK---L 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            D ER  IK  L FFA+S+ +V  N+       +  PE R +   Q   E +HS T+  +
Sbjct: 67  DDGERHFIKHVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHSETYSVL 126

Query: 135 ITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           I +  +D  E   L +  R +P I  KA WA+++  + +S               TR + 
Sbjct: 127 IDTYVVDPDEKQRLLHAIRTIPCIEKKAKWAIEWIGSQTS-------------FPTRLVA 173

Query: 192 FLC 194
           F  
Sbjct: 174 FAA 176


>gi|241951066|ref|XP_002418255.1| ribonucleoside-diphosphate reductase small chain 1, putative;
           ribonucleotide reductase r2 subunit 1, putative;
           ribonucleotide reductase small subunit 1, putative
           [Candida dubliniensis CD36]
 gi|223641594|emb|CAX43555.1| ribonucleoside-diphosphate reductase small chain 1, putative
           [Candida dubliniensis CD36]
          Length = 413

 Score =  209 bits (533), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 45/175 (25%), Positives = 80/175 (45%), Gaps = 9/175 (5%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L        + P++Y   W  Y  A  + W   E+ +  DL  W +K  L ++ER 
Sbjct: 89  EEPLLVENKRRYVMFPIRYHEIWNFYKKAEASFWTAEEIDLSKDLDDWNNK--LNENERY 146

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            + R L FFA+S+ +V  N++      +  PE + +   Q   E +HS T+  +I +   
Sbjct: 147 FVSRVLAFFAASDGIVGENLIENFSTEVQLPEAKSFYGFQIMMENIHSETYSLLIETYIK 206

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           D  E   LFN    +P I  KA+WA+++ Q   +     + +R  +      + F
Sbjct: 207 DPQEADYLFNAIANIPCIQKKADWAIKWIQDDEA----LYGERLVAFAAVEGIFF 257


>gi|15605563|ref|NP_220349.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis D/UW-3/CX]
 gi|255311668|ref|ZP_05354238.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis 6276]
 gi|255317969|ref|ZP_05359215.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis 6276s]
 gi|14195107|sp|O84835|RIR2_CHLTR RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|51247460|pdb|1SYY|A Chain A, Crystal Structure Of The R2 Subunit Of Ribonucleotide
           Reductase From Chlamydia Trachomatis
 gi|3329298|gb|AAC68425.1| Ribonucleoside Reductase, Small Chain [Chlamydia trachomatis
           D/UW-3/CX]
 gi|296436383|gb|ADH18557.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis G/9768]
 gi|296437314|gb|ADH19484.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis G/11222]
 gi|296438242|gb|ADH20403.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis G/11074]
 gi|297140743|gb|ADH97501.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           trachomatis G/9301]
 gi|297748957|gb|ADI51503.1| Ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis D-EC]
 gi|297749837|gb|ADI52515.1| Ribonucleoside-diphosphate reductase beta chain [Chlamydia
           trachomatis D-LC]
          Length = 346

 Score =  209 bits (532), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 95/185 (51%), Positives = 132/185 (71%), Gaps = 2/185 (1%)

Query: 10  IQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           +   +KRVN++ KR++N    DVNQL+P+KY WAWE YL+ C N+W+PTE+PM  D+ LW
Sbjct: 6   LDGKQKRVNLNSKRLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEIPMGKDIELW 65

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           KS + L++DER +I  NLGFF+++ESLV NNIVLAI++H++NPE RQYLLRQAFEEAVH+
Sbjct: 66  KS-DRLSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHT 124

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
           HTF YI  SLGLDE E+FN Y E  +I AK ++ ++ T  +  P+F   +       +  
Sbjct: 125 HTFLYICESLGLDEKEIFNAYNERAAIKAKDDFQMEITGKVLDPNFRTDSVEGLQEFVKN 184

Query: 189 SLRFL 193
            + + 
Sbjct: 185 LVGYY 189


>gi|15834835|ref|NP_296594.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           muridarum Nigg]
 gi|270285001|ref|ZP_06194395.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           muridarum Nigg]
 gi|270289024|ref|ZP_06195326.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           muridarum Weiss]
 gi|301336399|ref|ZP_07224601.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydia
           muridarum MopnTet14]
 gi|14195147|sp|Q9PL92|RIR2_CHLMU RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|7190253|gb|AAF39087.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydia
           muridarum Nigg]
          Length = 346

 Score =  209 bits (532), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 96/185 (51%), Positives = 131/185 (70%), Gaps = 2/185 (1%)

Query: 10  IQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           +   +KRVN++ KR++N    DVNQL+P+KY WAWE YL+ C N+W+PTE+ M  D+ LW
Sbjct: 6   LDGKQKRVNLNSKRLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEISMGKDIELW 65

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           KS N L++DER +I  NLGFF+++ESLV NNIVLAI++H++NPE RQYLLRQAFEEAVH+
Sbjct: 66  KS-NVLSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHT 124

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
           HTF YI  SLGLDE E+FN Y E  SI AK ++ ++ T  +  P+F   +       +  
Sbjct: 125 HTFLYICESLGLDEKEIFNAYNERASIKAKDDFQMEITGKVLDPNFRTDSVEGLQEFIKN 184

Query: 189 SLRFL 193
            + + 
Sbjct: 185 LVGYY 189


>gi|294890631|ref|XP_002773236.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
           ATCC 50983]
 gi|239878288|gb|EER05052.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
           ATCC 50983]
          Length = 350

 Score =  209 bits (532), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 46/177 (25%), Positives = 73/177 (41%), Gaps = 19/177 (10%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
            + +L        + P+KY   WE Y     + W   E+ +  DL  W++   L+D++R 
Sbjct: 14  KEDLLKENPHRYVMFPIKYLAIWEMYKKHEASFWTAEEIDLSQDLRDWEN---LSDNDRH 70

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I   L FFA+S+ +V  N+       +  PE R +   Q   E +HS T+  +I +   
Sbjct: 71  FISHVLAFFAASDGIVLENLSAKFSGEVQCPEARAFYGFQIAMENIHSETYSLLIDNYIK 130

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           D  E   +F     VPS+  KA WAL +                 +    R + F C
Sbjct: 131 DPAEKDKIFRAIETVPSVRKKAEWALSWIND-------------DNCFSERLIAFAC 174


>gi|302682638|ref|XP_003031000.1| hypothetical protein SCHCODRAFT_57055 [Schizophyllum commune H4-8]
 gi|300104692|gb|EFI96097.1| hypothetical protein SCHCODRAFT_57055 [Schizophyllum commune H4-8]
          Length = 362

 Score =  208 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 17/185 (9%)

Query: 13  GEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
           G+      ++ +L        L P++Y   W  Y     + W   E+ +  DL  W+ + 
Sbjct: 34  GDVDCPEHEEPLLKDSISRFVLFPIQYHEIWAMYKKEEASFWTAEEMDLSKDLHDWEER- 92

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
            + D+ER  I   L FFA+S+ +V  N++      +  PE R +   Q   E VHS T+ 
Sbjct: 93  -MNDNERHFISHVLAFFAASDGIVNENLLTRFCGEVKVPEARCFYGFQIMMENVHSETYS 151

Query: 133 YIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRS 189
            +I +   D  +   L N    +P +  KA WAL++               RRS    R 
Sbjct: 152 LLIDTYIRDPAQRTFLLNAVETIPCVRKKAEWALRWI------------ADRRSSFAIRL 199

Query: 190 LRFLC 194
           + F  
Sbjct: 200 VAFSA 204


>gi|15826569|pdb|1JK0|A Chain A, Ribonucleotide Reductase Y2y4 Heterodimer
          Length = 419

 Score =  208 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 17/176 (9%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +LN   +   L P+KY   W+ Y  A  + W   E+ +  D+  W   N + ++ER 
Sbjct: 95  EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWN--NRMNENERF 152

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I R L FFA+S+ +V  N+V      +  PE + +   Q   E +HS T+  +I +   
Sbjct: 153 FISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIK 212

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           D  E   LFN    +P I  KA WAL++ Q               +    R + F 
Sbjct: 213 DPKESEFLFNAIHTIPEIGEKAEWALRWIQ------------DADALFGERLVAFA 256


>gi|167837963|ref|ZP_02464822.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
           thailandensis MSMB43]
          Length = 303

 Score =  208 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 80/145 (55%), Positives = 105/145 (72%)

Query: 50  CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS 109
           C NHWMP E+ M  D+ALWK  NGLT+DER ++KRNLGFF +++SL ANNIVL  YRH++
Sbjct: 1   CANHWMPQEINMSRDIALWKDPNGLTEDERRIVKRNLGFFVTADSLAANNIVLGTYRHIT 60

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
            PECRQ+LLRQAFEEA+H+H +QYI+ SLGLDEGE+FN Y EV +I AK  + + +  TL
Sbjct: 61  APECRQFLLRQAFEEAIHTHAYQYIVESLGLDEGEIFNAYHEVAAIRAKDEFLIPFIHTL 120

Query: 170 SSPSFHYWNKRRRSRILTRSLRFLC 194
           + P+F         ++L   + F C
Sbjct: 121 TDPAFTTGTLEADQKLLKSLIVFAC 145


>gi|62866936|gb|AAY17359.1| ribonucleotide reductase small subunit [Haemonchus contortus]
          Length = 374

 Score =  208 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 55/179 (30%), Positives = 84/179 (46%), Gaps = 19/179 (10%)

Query: 20  DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER 79
           +++ +L    +   + PLKY   W  Y  A  + W   EV +  D+A W+    +TD+ER
Sbjct: 48  EEEPLLRENPNRFVIFPLKYHDIWAFYKKAVASFWTVEEVDLAKDMADWEK---MTDNER 104

Query: 80  LMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
             I R L FFA+S+ +V  N+V    + +  PE R +   Q   E +HS  +  +I +  
Sbjct: 105 FFISRVLAFFAASDGIVNENLVERFSKEVQVPEARFFYGSQIAIENIHSEMYSKLIETYI 164

Query: 140 LDEGE---LFNMYREVPSITAKANWALQY-TQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            DE E   LFN   EVP I  KA WA++   QT+++P               R + F  
Sbjct: 165 RDEKERNILFNAIFEVPCIAKKAEWAVKMGLQTITAP------------FAERVIAFAA 211


>gi|74025548|ref|XP_829340.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
 gi|70834726|gb|EAN80228.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
          Length = 337

 Score =  208 bits (531), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 19/183 (10%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           ++    ++ +L    D   + P+KY   W+KY  A ++ W   E+ + +D+  W+    L
Sbjct: 10  RKEGEVEEPLLTENPDRYVIFPIKYPDIWQKYKEAESSIWTVEEIDLGNDMTDWEK---L 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            D ER  IK  L FFA+S+ +V  N+       +  PE R +   Q   E +H  T+  +
Sbjct: 67  DDGERHFIKHVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHCETYSVL 126

Query: 135 ITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           I +  +D  E   L +  R +P I  KA WA+++  + +S               TR + 
Sbjct: 127 IDTYVVDPDEKQRLLHAIRTIPCIEKKAKWAIEWIGSQTS-------------FPTRLVA 173

Query: 192 FLC 194
           F  
Sbjct: 174 FAA 176


>gi|62185356|ref|YP_220141.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           abortus S26/3]
 gi|62148423|emb|CAH64191.1| putative ibonucleoside reductase small subunit [Chlamydophila
           abortus S26/3]
          Length = 349

 Score =  208 bits (531), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 96/185 (51%), Positives = 131/185 (70%), Gaps = 2/185 (1%)

Query: 10  IQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           ++   KRV ++ KR++N    DVNQL+P+KY WAWE Y++ C N W+PTEVPM  D+ LW
Sbjct: 9   LEGKSKRVQLNSKRLVNCNQVDVNQLVPIKYKWAWEHYVNGCANTWLPTEVPMARDIELW 68

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           KS N L++DER +I  NLGFF+++ESLV NNIVLAI++H++NPE RQYLLRQAFEEAVH+
Sbjct: 69  KS-NNLSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHITNPEARQYLLRQAFEEAVHT 127

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
           HTF YI  SLGLDE E+FN Y E  +I AK ++ +  T  +  P+F   +    S+ +  
Sbjct: 128 HTFLYICESLGLDEAEVFNAYNERATIRAKDDFQMTLTGDVLDPNFSTNSLEGLSQFIKN 187

Query: 189 SLRFL 193
            + + 
Sbjct: 188 LVGYY 192


>gi|146298285|ref|YP_001192876.1| ribonucleoside-diphosphate reductase [Flavobacterium johnsoniae
           UW101]
 gi|146152703|gb|ABQ03557.1| Ribonucleoside-diphosphate reductase [Flavobacterium johnsoniae
           UW101]
          Length = 325

 Score =  208 bits (531), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 19/176 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    +   + P+K+   WE Y     + W   E+ +  DL  W +K  L DDER  
Sbjct: 5   EPILQENKNRFVIFPIKHHDIWEWYKKMEASFWTAEEIDLHQDLTDWNNK--LNDDERYF 62

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+       +   E + +   Q   E +HS T+  +I +   D
Sbjct: 63  IKHILAFFAASDGIVNENLAENFVNEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKD 122

Query: 142 EG---ELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           E    ELFN     P+I  K  WAL++ ++                   R + F  
Sbjct: 123 EAEKTELFNALEVFPAIAKKGEWALKWIES--------------DSFAERLIAFAA 164


>gi|149173739|ref|ZP_01852368.1| ribonucleotide-diphosphate reductase beta subunit [Planctomyces
           maris DSM 8797]
 gi|148847269|gb|EDL61603.1| ribonucleotide-diphosphate reductase beta subunit [Planctomyces
           maris DSM 8797]
          Length = 359

 Score =  208 bits (531), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 101/192 (52%), Positives = 129/192 (67%), Gaps = 3/192 (1%)

Query: 4   NTGLSPI-QAGEKRVNVDDKRMLNA-RSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
            T +SP+      R   D KR++N  + DVNQL+PLKY WAWE YL+ C NHWMPTEV M
Sbjct: 11  KTPVSPVGDTPTGRFKADKKRLINCSQVDVNQLMPLKYHWAWEHYLNGCANHWMPTEVGM 70

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D+  W+S + L++ ER +I RNLGFFA++ESLVANNIVLAI++H++N ECRQYLLRQA
Sbjct: 71  TKDIETWRS-SKLSEGERFVIMRNLGFFATAESLVANNIVLAIFKHVTNAECRQYLLRQA 129

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRR 181
           FEEAVHSHTF YI+ SLGL+E E+FNMY EVP+I  K    ++ T  +    F       
Sbjct: 130 FEEAVHSHTFLYIVESLGLNESEVFNMYHEVPAIAKKDQLEMELTSEILDHDFTTDTFEG 189

Query: 182 RSRILTRSLRFL 193
               L   + + 
Sbjct: 190 AQAFLKNLIGYY 201


>gi|89898045|ref|YP_515155.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           felis Fe/C-56]
 gi|89331417|dbj|BAE81010.1| ribonucleoside-diphosphate reductase beta chain [Chlamydophila
           felis Fe/C-56]
          Length = 349

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 96/185 (51%), Positives = 131/185 (70%), Gaps = 2/185 (1%)

Query: 10  IQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           ++   KRV ++ KR++N    DVNQL+P+KY WAWE YL+ C N+W+PTEVPM  D+ LW
Sbjct: 9   LEGKSKRVQLNSKRLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEVPMARDIDLW 68

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           KS N L++DER +I  NLGFF+++ESLV NNIVLAI++H++NPE RQYLLRQAFEEAVH+
Sbjct: 69  KS-NELSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHITNPEVRQYLLRQAFEEAVHT 127

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
           HTF YI  SLGLDE E+FN Y E  +I AK ++ +  T+ +  P+F         + +  
Sbjct: 128 HTFLYICESLGLDESEVFNAYNERATIKAKDDFQMDLTRDVLDPNFSTHTIENLRQFIKN 187

Query: 189 SLRFL 193
            + + 
Sbjct: 188 LVGYY 192


>gi|260061082|ref|YP_003194162.1| putative ribonucleoside-diphosphate reductase small chain
           [Robiginitalea biformata HTCC2501]
 gi|88785214|gb|EAR16383.1| probable ribonucleoside-diphosphate reductase small chain
           [Robiginitalea biformata HTCC2501]
          Length = 328

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 11/179 (6%)

Query: 17  VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           ++  ++ +L    D   + P+++   WE Y       W   E+ +  DL+ W +K  L+D
Sbjct: 1   MSAAEEPILKENKDRFVIFPIQHHDLWEWYKKCEACFWTAEEIDLHQDLSDWNNK--LSD 58

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
           DE+  IK  L FFA+S+ +V  N+       +   E + +   Q   E +HS T+  +I 
Sbjct: 59  DEKYFIKHILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLID 118

Query: 137 SLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           +   DE E   LF      P+I  KA+WAL++ ++   PSF    +R  +      + F
Sbjct: 119 TYVKDEKEKNVLFQAIENFPAIKKKADWALKWIES---PSF---AERLIAFAAVEGIFF 171


>gi|124010268|ref|ZP_01694921.1| ribonucleoside-diphosphate reductase, beta subunit [Microscilla
           marina ATCC 23134]
 gi|123983653|gb|EAY24093.1| ribonucleoside-diphosphate reductase, beta subunit [Microscilla
           marina ATCC 23134]
          Length = 330

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 19/180 (10%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           N   + +L +  +   L P++    W+ Y  A  + W   E+ +  DL  W  K  L DD
Sbjct: 3   NTVSEPLLESVDNRFVLFPIQQNDIWQMYKQAEASFWTAEEIDLAQDLKDWDEK--LNDD 60

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           ER  I   L FFA+S+ +V  N+ +     + +PE R +   Q   E +H+ T+  +I +
Sbjct: 61  ERHFITHVLAFFAASDGIVNENLAVNFLEEVKSPEARCFYGFQVAIENIHAETYSLLIDT 120

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
              D  E   LFN    VP +  KA WAL++                +     R + F  
Sbjct: 121 YIKDADEKHRLFNALETVPCVKKKAEWALRWID--------------KGSFAERLIAFAA 166


>gi|332045030|gb|EGI81223.1| Ribonucleoside-diphosphate reductase [Lacinutrix algicola 5H-3-7-4]
          Length = 327

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 53/174 (30%), Positives = 82/174 (47%), Gaps = 11/174 (6%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    D   + P+++   WE Y  +  + W   E+ +  DL  W SK  LTDDER  
Sbjct: 6   EPILQENKDRFVIFPIQHHDLWEWYKKSEASMWTAEEIDLHQDLTDWSSK--LTDDERYF 63

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+       +   E + +   Q   E +HS T+  +I +   D
Sbjct: 64  IKHVLAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKD 123

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           E E   LFN     P+I  KA WAL++ ++   PSF    +R  +      + F
Sbjct: 124 EKEKAMLFNAIETFPAIKKKAEWALKWIES---PSF---AERLIAFAAVEGIFF 171


>gi|298707394|emb|CBJ30029.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 380

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 49/189 (25%), Positives = 79/189 (41%), Gaps = 10/189 (5%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           +S ++  E    +  + +L        L P++    W+ Y  A    W   E+ +  D  
Sbjct: 46  VSEMRRKEMEGTLKPEPLLVENPGRFVLFPIQDNEVWQMYKKAEACFWTAEELDLAHDHK 105

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            W+   GLTDDER  +K  L FFA+S+ +V  N+       +   E R +   Q   E +
Sbjct: 106 DWE---GLTDDERHFVKHVLAFFAASDGIVNENLASNFSSEIQLSEARCFYGFQIAIENI 162

Query: 127 HSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           HS  +  +I +   D  E   LFN    VP +  KA WAL++      P    + +R  +
Sbjct: 163 HSEVYSLLIDTYVKDAAEKTHLFNAMETVPCVRRKARWALRWC----DPKLASYAERLVA 218

Query: 184 RILTRSLRF 192
                 + F
Sbjct: 219 FAAVEGIFF 227


>gi|325953830|ref|YP_004237490.1| ribonucleoside-diphosphate reductase [Weeksella virosa DSM 16922]
 gi|323436448|gb|ADX66912.1| Ribonucleoside-diphosphate reductase [Weeksella virosa DSM 16922]
          Length = 323

 Score =  208 bits (530), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 19/177 (10%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L    +   + P+++   W+ Y  A  + W   EV +  D+  W++K  L  DER 
Sbjct: 2   NEPILQNNKNRFVIFPIQHDDIWQFYKKAEASFWTAEEVDLSSDMNDWQNK--LNKDERY 59

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I   L FFA+S+ +V  N+ +   + +  PE R +   Q   E +HS  +  +I +   
Sbjct: 60  FISHVLAFFAASDGIVNENLAVNFVQEVQYPEARFFYGFQIMIENIHSEMYSLLIDTYIK 119

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           D  E   L      +P +  KA+WAL++ ++                   R + F  
Sbjct: 120 DPKEKDHLLRAIETIPCVGKKADWALEWIES--------------DNFAERLIAFAA 162


>gi|225012154|ref|ZP_03702591.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
           MS024-2A]
 gi|225003709|gb|EEG41682.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
           MS024-2A]
          Length = 325

 Score =  208 bits (530), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 19/176 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    +   + P+K+   WE Y     + W   E+ +  DL  W +K  LT+DE+  
Sbjct: 5   EPILQENENRFVIFPIKHHDIWEWYKKMEASFWTAEEIDLHQDLTDWNTK--LTEDEKYF 62

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+       +   E + +   Q   E +HS T+  +I +   D
Sbjct: 63  IKHILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKD 122

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + E   LF      P+I  KA+WAL++  +                   R + F  
Sbjct: 123 DVEKDRLFKAIEVFPAIKKKADWALRWIDS--------------DSFAERLIAFAA 164


>gi|323354474|gb|EGA86313.1| Rnr2p [Saccharomyces cerevisiae VL3]
          Length = 306

 Score =  208 bits (529), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 17/176 (9%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +LN   +   L P+KY   W+ Y  A  + W   E+ +  D+  W   N + ++ER 
Sbjct: 75  EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWN--NRMNENERF 132

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I R L FFA+S+ +V  N+V      +  PE + +   Q   E +HS T+  +I +   
Sbjct: 133 FISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIK 192

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           D  E   LFN    +P I  KA WAL++ Q               +    R + F 
Sbjct: 193 DPKESEFLFNAIHTIPEIGEKAEWALRWIQ------------DADALFGERLVAFA 236


>gi|224100309|ref|XP_002311826.1| predicted protein [Populus trichocarpa]
 gi|222851646|gb|EEE89193.1| predicted protein [Populus trichocarpa]
          Length = 342

 Score =  208 bits (529), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 48/188 (25%), Positives = 79/188 (42%), Gaps = 21/188 (11%)

Query: 12  AGEKRVNVDDK--RMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
              +R+  +DK   +L  ++    + P++Y   WE Y  A  + W   EV +  D+  W+
Sbjct: 8   TESERIREEDKQEPILKEQNQRFCMFPIRYKELWEMYKKAEASFWTAEEVDLSRDMQQWE 67

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
               L+D E+  I   L FFA+S+ +V  N+       +  PE R +   Q   E +HS 
Sbjct: 68  ---ALSDSEKHFISHVLAFFAASDGIVLENLAARFLYDVQIPEARAFYGFQIAMENIHSE 124

Query: 130 TFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRIL 186
            +  ++ +   D  E   LFN    +P +  KA WAL + Q+                  
Sbjct: 125 MYSLLLETYIKDSREKHRLFNAIENIPCVAEKAKWALDWIQSSMV-------------FA 171

Query: 187 TRSLRFLC 194
            R + F C
Sbjct: 172 ERLVAFAC 179


>gi|417659|sp|P32209|RIR2_SWPVK RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|347472|gb|AAC37857.1| ribonucleotide reductase [Swinepox virus]
          Length = 274

 Score =  208 bits (529), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 6/150 (4%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L        + P+KY   W+ Y  +  + W   EV +  DL  W   + LT DE+  
Sbjct: 2   EPILQESDSRFVIFPIKYHDIWKMYKQSVASFWTVEEVDLSKDLDDW---DKLTKDEKYF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFASS+ +V  N+    Y  +   E R +   Q   E +HS  +  +I +   D
Sbjct: 59  IKHILAFFASSDGIVNENLAERFYVDVQCSEARCFYGFQIAMENIHSEMYSLLIDTYVRD 118

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQT 168
             E   LFN    +  +  KA+WA ++  +
Sbjct: 119 NIEKMHLFNAIETMECVKKKADWARKWISS 148


>gi|329943118|ref|ZP_08291892.1| ribonucleotide reductase, small chain family protein [Chlamydophila
           psittaci Cal10]
 gi|325507260|gb|ADZ18898.1| ribonucleotide reductase subunit beta [Chlamydophila psittaci 6BC]
 gi|328814665|gb|EGF84655.1| ribonucleotide reductase, small chain family protein [Chlamydophila
           psittaci Cal10]
 gi|328914953|gb|AEB55786.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
           psittaci 6BC]
          Length = 346

 Score =  208 bits (529), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 97/185 (52%), Positives = 132/185 (71%), Gaps = 2/185 (1%)

Query: 10  IQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           ++   KRV ++ KR++N    DVNQL+P+KY WAWE YL+ C N+W+PTEVPM  D+ LW
Sbjct: 6   LEGKSKRVQLNSKRLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEVPMARDIELW 65

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           KS N L++DER +I  NLGFF+++ESLV NNIVLAI++H++NPE RQYLLRQAFEEAVH+
Sbjct: 66  KS-NNLSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHITNPEARQYLLRQAFEEAVHT 124

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
           HTF YI  SLGLDE E+FN Y E  +I AK ++ +  T  +  P+F   +    S+ +  
Sbjct: 125 HTFLYICESLGLDEAEVFNAYNERATIRAKDDFQMTLTGDVLDPNFSTNSLEGLSQFIKN 184

Query: 189 SLRFL 193
            + + 
Sbjct: 185 LVGYY 189


>gi|126662515|ref|ZP_01733514.1| ribonucleoside-diphosphate reductase 1, beta subunit [Flavobacteria
           bacterium BAL38]
 gi|126625894|gb|EAZ96583.1| ribonucleoside-diphosphate reductase 1, beta subunit [Flavobacteria
           bacterium BAL38]
          Length = 325

 Score =  207 bits (528), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 48/176 (27%), Positives = 75/176 (42%), Gaps = 19/176 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    D   + P+K+   WE Y       W   E+ +  DL  W +K  L DDE+  
Sbjct: 5   EPILQENKDRFVIFPIKHQDIWEWYKKQEACIWTAEEIDLHTDLNDWNNK--LNDDEKYF 62

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+       +  PE + +   Q   E +HS T+  +I +   D
Sbjct: 63  IKHILAFFAASDGIVNENLAENFVNEVQYPEAKFFYGFQIMMENIHSETYSLLIDTYVKD 122

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           E E   LF+     P+I  KA WAL++ ++                   R + F  
Sbjct: 123 EVEKNKLFHAIETFPAIKEKAQWALKWIES--------------DSFAERLIAFAA 164


>gi|324519017|gb|ADY47264.1| Ribonucleoside-diphosphate reductase small chain [Ascaris suum]
          Length = 376

 Score =  207 bits (528), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 51/195 (26%), Positives = 83/195 (42%), Gaps = 18/195 (9%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           N+T     +  +K      + +L    +   + P+KY   W+ Y  A  + W   EV + 
Sbjct: 38  NSTTRKAPEVTDKGDEEVVEPLLANNPNRFVIFPIKYHDIWDFYKRAVASFWTVEEVDLS 97

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D   W++   L+D ER  I R L FFA+S+ +V  N+V    + +  PE R +   Q  
Sbjct: 98  KDYQHWEN---LSDGERFFISRVLAFFAASDGIVNENLVERFAQEVQVPEARFFYGFQIM 154

Query: 123 EEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNK 179
            E +HS  +  ++ +   D+ E   LFN   E   I  KA+WAL++     +P       
Sbjct: 155 IENIHSEMYSKMVETYIRDDNERKKLFNAINEFEFIKKKADWALKWIADKQAP------- 207

Query: 180 RRRSRILTRSLRFLC 194
                   R + F  
Sbjct: 208 -----YAERLIAFAA 217


>gi|323333040|gb|EGA74442.1| Rnr2p [Saccharomyces cerevisiae AWRI796]
          Length = 306

 Score =  207 bits (528), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 17/176 (9%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +LN   +   L P+KY   W+ Y  A  + W   E+ +  D+  W   N + ++ER 
Sbjct: 75  EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWN--NRMNENERF 132

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I R L FFA+S+ +V  N+V      +  PE + +   Q   E +HS T+  +I +   
Sbjct: 133 FISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIK 192

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           D  E   LFN    +P I  KA WAL++ Q               +    R + F 
Sbjct: 193 DPKESEFLFNAIHTIPEIGEKAEWALRWIQ------------DADALFGERLVAFA 236


>gi|189501948|ref|YP_001957665.1| hypothetical protein Aasi_0535 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497389|gb|ACE05936.1| hypothetical protein Aasi_0535 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 355

 Score =  207 bits (528), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 12/174 (6%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    +   L P+++   WE Y  A  + W   E+ +  DL  W +   L D ER  
Sbjct: 34  EPILQENKNRFVLFPIEHHDIWEFYKKAEASFWTAEEIDLGQDLKDWAN---LNDGERHF 90

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           I   L FFA+S+ +V  N+       +   E + +   Q   E +HS T+  +I +   D
Sbjct: 91  ISHVLAFFAASDGIVNENLAENFVAEVQYTEAKFFYGFQIAVENIHSETYSLLIDTYIKD 150

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             E   LFN    +  +  KA+WAL++ +  S      + +R  +      + F
Sbjct: 151 PQERDKLFNAIDTLDCVKKKADWALRWIEQAS------FAERLVAFAAVEGIFF 198


>gi|52077136|dbj|BAD46182.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group]
 gi|52077275|dbj|BAD46317.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group]
 gi|186920364|gb|ACC95435.1| ribonucleotide diphosphate reductase small subunit 1 [Oryza sativa
           Japonica Group]
          Length = 339

 Score =  207 bits (528), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 45/177 (25%), Positives = 73/177 (41%), Gaps = 18/177 (10%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L   S+   + P++Y   WE Y  A  + W   EV +  D   W     L+ DER 
Sbjct: 14  EEPLLAESSERFSMFPIRYPQIWEFYKKAVASFWTAEEVDLSADARHWD--AALSPDERH 71

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I   L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  ++ +   
Sbjct: 72  FISHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIR 131

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           D  E   LF     VP++  KA+WA+++                  R   R + F C
Sbjct: 132 DGAEKDRLFRAIDTVPAVRRKADWAMRWIDGGE-------------RFAERLVAFAC 175


>gi|840719|emb|CAA54549.1| ribonucleotide reductase R2 [Arabidopsis thaliana]
          Length = 340

 Score =  207 bits (528), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 50/192 (26%), Positives = 80/192 (41%), Gaps = 20/192 (10%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
            L   Q  +      ++ +L A++    + P++Y   WE Y  A  + W   EV +  D+
Sbjct: 3   SLKEGQGRDMEEGESEEPLLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTAEEVDLSTDV 62

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             W+    LTD E+  I   L FFA+S+ +V  N+       +  PE R +   Q   E 
Sbjct: 63  QQWE---ALTDSEKHFISHILAFFAASDGIVLENLA-RFLNDVQVPEARAFYGFQIAMEN 118

Query: 126 VHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRR 182
           +HS  +  ++ +   D  E   LFN    +P I+ KA W L + Q+  S           
Sbjct: 119 IHSEMYSLLLETFIKDSKEKDRLFNAIETIPCISKKAKWCLDWIQSPMS----------- 167

Query: 183 SRILTRSLRFLC 194
                R + F C
Sbjct: 168 --FAVRLVAFAC 177


>gi|313848275|emb|CBY17276.1| putative ibonucleoside reductase small subunit [Chlamydophila
           psittaci RD1]
          Length = 349

 Score =  207 bits (527), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 97/185 (52%), Positives = 132/185 (71%), Gaps = 2/185 (1%)

Query: 10  IQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           ++   KRV ++ KR++N    DVNQL+P+KY WAWE YL+ C N+W+PTEVPM  D+ LW
Sbjct: 9   LEGKSKRVQLNSKRLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEVPMARDIELW 68

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           KS N L++DER +I  NLGFF+++ESLV NNIVLAI++H++NPE RQYLLRQAFEEAVH+
Sbjct: 69  KS-NNLSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHITNPEARQYLLRQAFEEAVHT 127

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
           HTF YI  SLGLDE E+FN Y E  +I AK ++ +  T  +  P+F   +    S+ +  
Sbjct: 128 HTFLYICESLGLDEAEVFNAYNERATIRAKDDFQMTLTGDVLDPNFSTNSLEGLSQFIKN 187

Query: 189 SLRFL 193
            + + 
Sbjct: 188 LVGYY 192


>gi|150024561|ref|YP_001295387.1| ribonucleoside-diphosphate reductase, beta subunit [Flavobacterium
           psychrophilum JIP02/86]
 gi|149771102|emb|CAL42569.1| Ribonucleoside-diphosphate reductase, beta subunit [Flavobacterium
           psychrophilum JIP02/86]
          Length = 325

 Score =  207 bits (527), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 48/176 (27%), Positives = 78/176 (44%), Gaps = 19/176 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    +   + P+K+   WE Y S   + W   E+ +  DL  W +K  L++DER  
Sbjct: 5   EPILQENKNRFVIFPIKHHDIWEFYKSMEASFWTAEEIDLSQDLNDWNNK--LSNDERYF 62

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           +K  L FFA+S+ +V  N+       +   E + +   Q   E +HS T+  +I +   D
Sbjct: 63  VKHILAFFAASDGIVNENLAENFVNEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKD 122

Query: 142 E---GELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           E    ELFN     P+I  KA+WALQ+ ++                   R + F  
Sbjct: 123 EVEKDELFNALEVFPAIKKKADWALQWIES--------------DSFAERLIAFAA 164


>gi|9633651|ref|NP_051729.1| ribonucleotide reductase, small subunit [Myxoma virus]
 gi|6523870|gb|AAF14903.1|AF170726_19 ribonucleotide reductase, small subunit [Myxoma virus]
 gi|301134541|gb|ADK63655.1| M015L [Myxoma virus]
          Length = 322

 Score =  207 bits (527), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 46/178 (25%), Positives = 75/178 (42%), Gaps = 18/178 (10%)

Query: 19  VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
           ++D+ +L    D   + P++Y   W  Y  A  + W P EV +  DL  W+    LT DE
Sbjct: 1   MEDEPVLKESLDRYVVFPIQYNDIWNMYKKAVASFWTPEEVDISKDLKDWR---VLTPDE 57

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           +  IK  L FFA+S+ +V  N+    Y  +   E R +   Q   E +HS  +  +I + 
Sbjct: 58  KYFIKHILAFFAASDGIVNENLAERFYVEVQIAEARCFYGFQIAMENIHSEMYSLLIDTY 117

Query: 139 GLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            +D  E   LF     +  I  KA W  ++ +             + +    R + F 
Sbjct: 118 IIDLQEKEKLFKAIETMDCIKQKAEWVQKWIRN------------KDATYAERLIAFA 163


>gi|86134368|ref|ZP_01052950.1| ribonucleoside-diphosphate reductase small chain [Polaribacter sp.
           MED152]
 gi|85821231|gb|EAQ42378.1| ribonucleoside-diphosphate reductase small chain [Polaribacter sp.
           MED152]
          Length = 323

 Score =  207 bits (527), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 48/176 (27%), Positives = 76/176 (43%), Gaps = 19/176 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    +   + P+++   WE Y       W   E+ +  DL  W +K  LTDDER  
Sbjct: 5   EPILQPNDNRFVIFPIQHNDLWEWYKKQQACFWTAEEIDLHSDLVDWTTK--LTDDERYF 62

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+       +   E + +   Q   E +HS T+  +I +   D
Sbjct: 63  IKHILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKD 122

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           E E   LF      P+I  KA+WAL++ ++ S                 R + F  
Sbjct: 123 EVEKDRLFRAIEVFPAIKKKADWALKWIESES--------------FAERLIAFAA 164


>gi|323450429|gb|EGB06310.1| hypothetical protein AURANDRAFT_65685 [Aureococcus anophagefferens]
          Length = 349

 Score =  207 bits (526), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 43/174 (24%), Positives = 72/174 (41%), Gaps = 9/174 (5%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L        L P+++   W+ Y  A  + W   E+ +  D+  W  K  L D ER  
Sbjct: 29  EPLLTEDPHRFVLFPIEHDDVWQMYKKAEASFWTAEEIDLCHDIKDWDQK--LNDKERHF 86

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  +I +   D
Sbjct: 87  IKHVLAFFAASDGIVNENLAQNFATEVQWAEARCFYGFQIAIENIHSEVYSLLIDTYIRD 146

Query: 142 ---EGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
              + E       +P +T KA WAL++      P    + +R  +      + F
Sbjct: 147 AKEKHECLTAIDTMPCVTKKAQWALRWC----DPDRASFAERIIAFAAVEGIFF 196


>gi|242095388|ref|XP_002438184.1| hypothetical protein SORBIDRAFT_10g009290 [Sorghum bicolor]
 gi|241916407|gb|EER89551.1| hypothetical protein SORBIDRAFT_10g009290 [Sorghum bicolor]
          Length = 339

 Score =  207 bits (526), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 50/196 (25%), Positives = 78/196 (39%), Gaps = 26/196 (13%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           A  T + P  A E         +L   SD   + P+++   WE Y  A  + W   EV +
Sbjct: 3   AAPTLVPPCDAEEP--------LLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDL 54

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D   W     L+ DER  I   L FFA+S+ +V  N+       +   E R +   Q 
Sbjct: 55  SSDARHWDE--ALSPDERHFISHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQI 112

Query: 122 FEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWN 178
             E +HS  +  ++ +   D+ E   LF     VP++  KA+WA+++             
Sbjct: 113 AIENIHSEMYSLLLETYIRDDAEKDRLFRAIDTVPAVRRKADWAMRWIDGGE-------- 164

Query: 179 KRRRSRILTRSLRFLC 194
                R   R + F C
Sbjct: 165 -----RFAERLVAFAC 175


>gi|290771185|emb|CAY80753.2| Rnr2p [Saccharomyces cerevisiae EC1118]
          Length = 399

 Score =  207 bits (526), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 17/176 (9%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +LN   +   L P+KY   W+ Y  A  + W   E+ +  D+  W   N + ++ER 
Sbjct: 75  EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWN--NRMNENERF 132

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I R L FFA+S+ +V  N+V      +  PE + +   Q   E +HS T+  +I +   
Sbjct: 133 FISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIK 192

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           D  E   LFN    +P I  KA WAL++ Q               +    R + F 
Sbjct: 193 DPKESEFLFNAIHTIPEIGEKAEWALRWIQ------------DADALFGERLVAFA 236


>gi|221120499|ref|XP_002159812.1| PREDICTED: similar to hCG23833 [Hydra magnipapillata]
          Length = 387

 Score =  207 bits (526), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 49/191 (25%), Positives = 82/191 (42%), Gaps = 12/191 (6%)

Query: 8   SPIQAGEKRVNVD---DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
             I+  +  V  +   D+ +L        L P++Y   W+ Y  A  + W   EV +  D
Sbjct: 43  EEIKKAKPHVTTNENCDEPLLRENPRRFVLFPIQYKDIWKMYKQAEASFWTVEEVDLAAD 102

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
              W+ K  L   E+  I   L FFA+S+ +V  N+V    + +  PE R +   Q   E
Sbjct: 103 AVHWEEK--LKPQEKYFISHVLAFFAASDGIVNENLVECFSQEVQLPEARAFYGFQIAIE 160

Query: 125 AVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRR 181
            +HS  +  +I +L  D  E   LFN    +P +  KA WAL++     +     +++R 
Sbjct: 161 NIHSEMYSLLIDTLIKDPIEKSNLFNAIETMPCVQKKAVWALKWI----NKDCASFSERV 216

Query: 182 RSRILTRSLRF 192
            +      + F
Sbjct: 217 VAFAAVEGIFF 227


>gi|326916502|ref|XP_003204546.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Meleagris gallopavo]
          Length = 339

 Score =  207 bits (526), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 10/161 (6%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
            P++Y   W  Y  A  + W   EV +  DL  W+S   L  +E+  I   L FFA+S+ 
Sbjct: 33  FPIQYHDIWRMYKKAEASFWTAEEVDLSKDLQHWES---LKPEEKYFISHVLAFFAASDG 89

Query: 95  LVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYRE 151
           +V  N+V    + +   E R +   Q   E +HS  +  +I +   D  E   LFN    
Sbjct: 90  IVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREFLFNAIET 149

Query: 152 VPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           +P +  KA+WA+++           + +R  +      + F
Sbjct: 150 LPCVKKKADWAIRWI----GDKKATYGERVVAFAAVEGIFF 186


>gi|255551489|ref|XP_002516790.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
           communis]
 gi|223543878|gb|EEF45404.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
           communis]
          Length = 342

 Score =  207 bits (526), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 44/175 (25%), Positives = 73/175 (41%), Gaps = 19/175 (10%)

Query: 23  RMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMI 82
            +L  ++    + P++Y   WE Y  A  + W   EV +  D+  W++   L+  E+  I
Sbjct: 21  PILKEQNQRFCMFPIRYKSLWEMYKKAEASFWTAEEVDLSQDVQQWET---LSVSEKHFI 77

Query: 83  KRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE 142
              L FFA+S+ +V  N+       +  PE R +   Q   E +HS  +  ++ +   D 
Sbjct: 78  SHVLAFFAASDGIVLENLAARFLNDIQVPEARAFYGFQIAMENIHSEMYSLLLETYIKDS 137

Query: 143 GE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            E   LFN    +P +  KA WAL +  + S                 R + F C
Sbjct: 138 REKNRLFNAIETIPCVARKAKWALDWIHSSS-------------LYAERLVAFAC 179


>gi|39977011|ref|XP_369893.1| hypothetical protein MGG_06408 [Magnaporthe oryzae 70-15]
 gi|145016179|gb|EDK00669.1| hypothetical protein MGG_06408 [Magnaporthe oryzae 70-15]
          Length = 403

 Score =  207 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 50/189 (26%), Positives = 78/189 (41%), Gaps = 26/189 (13%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
            P  A   +    D+ +L                 W+ Y  A  + W   E+ +  DL  
Sbjct: 60  KPAVAPTIKAFEMDEPILQENPQRFV---------WQMYKKAEASFWTAEEIDLSKDLHD 110

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           W +K  LTDDE+  I   L FFA+S+ +V  N+V      +  PE R +   Q   E +H
Sbjct: 111 WNNK--LTDDEKYFISHILAFFAASDGIVNENLVERFSAEVQIPEARCFYGFQIMMENIH 168

Query: 128 SHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           S T+  +I +   +  +   LFN    +P I  KA+WAL++               ++S 
Sbjct: 169 SETYSLLIDTYIKETAQRTYLFNAIDTIPCIRKKADWALRWI------------TDKKST 216

Query: 185 ILTRSLRFL 193
             TR + F 
Sbjct: 217 FATRLIAFA 225


>gi|326437649|gb|EGD83219.1| ribonucleotide reductase M2 B [Salpingoeca sp. ATCC 50818]
          Length = 408

 Score =  207 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 18/182 (9%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
              +  + +L        +LP+++   W  Y  A  + W   EV +  DL  W+   GL 
Sbjct: 80  DEEIAAEPLLRENPSRFVILPIQHRQVWSMYKKAVASFWTAEEVDLSRDLDHWR---GLK 136

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           D E+  IK  L FFA+S+ +V  N+V      +  PE R +   Q   E +HS  +  +I
Sbjct: 137 DTEQHFIKHVLAFFAASDGIVNENLVERFMCEVQLPEARCFYGFQIMIENIHSEMYSLLI 196

Query: 136 TSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
            +   D  E   LFN    +P++  KA WA+++               +R+    R + F
Sbjct: 197 DTYINDPQEKHMLFNAVETLPAVKRKAEWAMRWID------------HKRASFAERVVAF 244

Query: 193 LC 194
             
Sbjct: 245 AA 246


>gi|6322434|ref|NP_012508.1| Rnr2p [Saccharomyces cerevisiae S288c]
 gi|1172946|sp|P09938|RIR2_YEAST RecName: Full=Ribonucleoside-diphosphate reductase small chain 1;
           AltName: Full=Ribonucleotide reductase R2 subunit 1;
           AltName: Full=Ribonucleotide reductase small subunit 1
 gi|52695523|pdb|1SMQ|A Chain A, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
           From Saccharomyces Cerevisiae
 gi|52695524|pdb|1SMQ|B Chain B, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
           From Saccharomyces Cerevisiae
 gi|52695525|pdb|1SMQ|C Chain C, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
           From Saccharomyces Cerevisiae
 gi|52695526|pdb|1SMQ|D Chain D, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
           From Saccharomyces Cerevisiae
 gi|172450|gb|AAA34988.1| ribonucleoside diphosphate reductase small subunit [Saccharomyces
           cerevisiae]
 gi|1008142|emb|CAA89317.1| RNR2 [Saccharomyces cerevisiae]
 gi|285812874|tpg|DAA08772.1| TPA: Rnr2p [Saccharomyces cerevisiae S288c]
          Length = 399

 Score =  207 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 17/176 (9%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +LN   +   L P+KY   W+ Y  A  + W   E+ +  D+  W   N + ++ER 
Sbjct: 75  EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWN--NRMNENERF 132

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I R L FFA+S+ +V  N+V      +  PE + +   Q   E +HS T+  +I +   
Sbjct: 133 FISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIK 192

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           D  E   LFN    +P I  KA WAL++ Q               +    R + F 
Sbjct: 193 DPKESEFLFNAIHTIPEIGEKAEWALRWIQ------------DADALFGERLVAFA 236


>gi|323347997|gb|EGA82256.1| Rnr2p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 399

 Score =  207 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 17/176 (9%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +LN   +   L P+KY   W+ Y  A  + W   E+ +  D+  W   N + ++ER 
Sbjct: 75  EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWN--NRMNENERF 132

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I R L FFA+S+ +V  N+V      +  PE + +   Q   E +HS T+  +I +   
Sbjct: 133 FISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIK 192

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           D  E   LFN    +P I  KA WAL++ Q               +    R + F 
Sbjct: 193 DPKESEFLFNAIHTIPEIGEKAEWALRWIQ------------DADALFGERLVAFA 236


>gi|242076364|ref|XP_002448118.1| hypothetical protein SORBIDRAFT_06g021460 [Sorghum bicolor]
 gi|241939301|gb|EES12446.1| hypothetical protein SORBIDRAFT_06g021460 [Sorghum bicolor]
          Length = 339

 Score =  207 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 45/177 (25%), Positives = 73/177 (41%), Gaps = 18/177 (10%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L   SD   + P+++   WE Y  A  + W   EV +  D   W     L+ DER 
Sbjct: 14  EEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSADARHWD--AALSPDERH 71

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I   L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  ++ +   
Sbjct: 72  FISHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIR 131

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           D  E   LF     VP++  KA+WA+++                  R   R + F C
Sbjct: 132 DGAEKDRLFRAIETVPAVRRKADWAMRWIDGGE-------------RFAERLVAFAC 175


>gi|207343947|gb|EDZ71248.1| YJL026Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 399

 Score =  207 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 50/176 (28%), Positives = 79/176 (44%), Gaps = 17/176 (9%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +LN   +   L P+KY   W+ Y  A  + W   E+ +  D+  W   N + ++ER 
Sbjct: 75  EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWN--NRMNENERF 132

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I R L FFA+S+S+V  N+V      +  PE + +   Q   E +HS T+  +I +   
Sbjct: 133 FISRVLAFFAASDSIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIK 192

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           D  E   LFN    +P I  KA WAL++ Q               +    R + F 
Sbjct: 193 DPKESEFLFNAIHTIPEIGEKAEWALRWIQ------------DADALFGERLVAFA 236


>gi|302833193|ref|XP_002948160.1| hypothetical protein VOLCADRAFT_101784 [Volvox carteri f.
           nagariensis]
 gi|300266380|gb|EFJ50567.1| hypothetical protein VOLCADRAFT_101784 [Volvox carteri f.
           nagariensis]
          Length = 354

 Score =  206 bits (525), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 49/194 (25%), Positives = 79/194 (40%), Gaps = 18/194 (9%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
                   +     +  D+ +L    +   L P++Y   WE Y  A  + W   EV    
Sbjct: 7   TANARATSSSVGSPSELDEAVLRENPNRFTLFPIRYPDLWEFYKRAVASFWTVEEVDFTG 66

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           DL  +  K  L ++ER  IK  L FFA+S+ +V  N+       +  PE R +   Q   
Sbjct: 67  DLYDFDHK--LKEEERRFIKYVLAFFAASDGIVMENLSARFMSEVQVPEARAFYGFQIAM 124

Query: 124 EAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           E VHS  +  ++     D  E   LFN  + + ++  KA+WAL++  + +S         
Sbjct: 125 ENVHSEMYSVLLDHYVRDPAERRQLFNAIQTIATVGKKADWALRWISSSNS--------- 175

Query: 181 RRSRILTRSLRFLC 194
                  R + F C
Sbjct: 176 ----FAERLVAFAC 185


>gi|151945057|gb|EDN63308.1| ribonucleotide reductase subunit [Saccharomyces cerevisiae YJM789]
 gi|190409471|gb|EDV12736.1| ribonucleotide reductase subunit [Saccharomyces cerevisiae RM11-1a]
 gi|256271075|gb|EEU06176.1| Rnr2p [Saccharomyces cerevisiae JAY291]
          Length = 399

 Score =  206 bits (525), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 17/176 (9%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +LN   +   L P+KY   W+ Y  A  + W   E+ +  D+  W   N + ++ER 
Sbjct: 75  EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWN--NRMNENERF 132

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I R L FFA+S+ +V  N+V      +  PE + +   Q   E +HS T+  +I +   
Sbjct: 133 FISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIK 192

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           D  E   LFN    +P I  KA WAL++ Q               +    R + F 
Sbjct: 193 DPKESEFLFNAIHTIPEIGEKAEWALRWIQ------------DADALFGERLVAFA 236


>gi|294950175|ref|XP_002786498.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
           ATCC 50983]
 gi|239900790|gb|EER18294.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
           ATCC 50983]
          Length = 350

 Score =  206 bits (525), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 45/176 (25%), Positives = 73/176 (41%), Gaps = 19/176 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L        + P+KY   WE Y     + W   E+ +  DL  W++   L+D++R  
Sbjct: 15  EDLLKENPHRYVMFPIKYLAIWEMYKKHEASFWTAEEIDLSQDLRDWEN---LSDNDRHF 71

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           I   L FFA+S+ +V  N+       +  PE R +   Q   E +HS T+  +I +   D
Sbjct: 72  ISHVLAFFAASDGIVLENLSAKFSGEVQCPEARAFYGFQIAMENIHSETYSLLIDNYIKD 131

Query: 142 E---GELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
                ++F     VPS+  KA WAL +                 +    R + F C
Sbjct: 132 PEQKDKIFRAIETVPSVRKKAEWALSWIND-------------DNCFAERLIAFAC 174


>gi|322795965|gb|EFZ18591.1| hypothetical protein SINV_11129 [Solenopsis invicta]
          Length = 426

 Score =  206 bits (525), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 47/183 (25%), Positives = 78/183 (42%), Gaps = 10/183 (5%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD-DLALWKSKN 72
           +   N + + +L    +   + P++Y   WE Y  A  + W   EVP+   D   W  K 
Sbjct: 92  KDDFNPELEPLLQEGPNRFVIFPIQYPDIWEMYKKAVASFWTIEEVPLHKLDKKDWDEK- 150

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
            L  DE+  I   L FFA+S+ +V  N++    + +   E R +   Q   E +HS  + 
Sbjct: 151 -LNSDEKYFISHVLAFFAASDGIVNENLIERFSQEVKIAEARCFYGFQIAIENIHSEMYS 209

Query: 133 YIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRS 189
            +I +   D  E   LFN    +P +  KA WAL +    S+     + +R  +      
Sbjct: 210 LLIETYISDPKEKDFLFNAIETLPCVGKKAKWALNWINHESA----TFPERVIAFAAVEG 265

Query: 190 LRF 192
           + F
Sbjct: 266 IFF 268


>gi|313675915|ref|YP_004053911.1| ribonucleoside-diphosphate reductase [Marivirga tractuosa DSM 4126]
 gi|312942613|gb|ADR21803.1| Ribonucleoside-diphosphate reductase [Marivirga tractuosa DSM 4126]
          Length = 331

 Score =  206 bits (525), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 45/183 (24%), Positives = 73/183 (39%), Gaps = 20/183 (10%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           +     D+ +L    D   L P+++   WE Y  A  + W   E+ +  D   W++   L
Sbjct: 3   EVTTFQDEPILKENKDRFVLFPIQHKDIWEFYKMAEASFWTAEEIDLSQDQKDWEN---L 59

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           T+ E   IK  L FFA+S+ +V  N+       +   E + +   Q   E VHS T+  +
Sbjct: 60  TEGETHFIKHVLAFFAASDGIVNENLAENFVAEVQYTEAKFFYGFQIAMENVHSETYSLL 119

Query: 135 ITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           I +   D  E   LFN    +  +  KA+WAL++                      R + 
Sbjct: 120 IDTYVKDNKEKDKLFNAIDTMDCVKKKADWALRWIDE--------------GNYAERLIA 165

Query: 192 FLC 194
           F  
Sbjct: 166 FAA 168


>gi|323308423|gb|EGA61668.1| Rnr2p [Saccharomyces cerevisiae FostersO]
          Length = 399

 Score =  206 bits (525), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 17/176 (9%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +LN   +   L P+KY   W+ Y  A  + W   E+ +  D+  W   N + ++ER 
Sbjct: 75  EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWN--NRMNENERF 132

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I R L FFA+S+ +V  N+V      +  PE + +   Q   E +HS T+  +I +   
Sbjct: 133 FISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIK 192

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           D  E   LFN    +P I  KA WAL++ Q               +    R + F 
Sbjct: 193 DPKESEFLFNAIHTIPEIGEKAEWALRWIQ------------DADALFGERLVAFA 236


>gi|322491821|emb|CBZ27094.1| ribonucleoside-diphosphate reductase small chain,putative
           [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 392

 Score =  206 bits (525), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 46/195 (23%), Positives = 82/195 (42%), Gaps = 11/195 (5%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +A    + P+    +  N +++ +         L P++Y   W KY    +  W   E+ 
Sbjct: 51  VAPGAEVLPVDKVAEGTNAEEEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEID 110

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           + +D+  W     L D ER  IK  L FFA S+ +V  N+       +  PE R +   Q
Sbjct: 111 LGNDMKDWA---ALNDGERHFIKHVLAFFAGSDGIVVENLAQRFMSDVKVPEARAFYGFQ 167

Query: 121 AFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYW 177
              E +HS T+  ++ +   D  E   L +  + +P I  KA WA+++  + +S     +
Sbjct: 168 LMMENIHSETYSVLLDTYITDSEEKLRLLHAIQTIPCIQRKAEWAVRWIGSSAS-----F 222

Query: 178 NKRRRSRILTRSLRF 192
            +R         + F
Sbjct: 223 QERLIGFAAVEGIFF 237


>gi|284039889|ref|YP_003389819.1| ribonucleoside-diphosphate reductase [Spirosoma linguale DSM 74]
 gi|283819182|gb|ADB41020.1| Ribonucleoside-diphosphate reductase [Spirosoma linguale DSM 74]
          Length = 349

 Score =  206 bits (525), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 43/175 (24%), Positives = 69/175 (39%), Gaps = 20/175 (11%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L        L P+K+   WE Y +   + W   E+ +  D+  W   N L D ER  
Sbjct: 8   EPILEEDKGRFVLFPIKHWDIWEYYKTHEASFWTAEEIDLGQDMKDW---NSLNDGERHF 64

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           I   L FFA+S+ +V  N+ +     +   E + +   Q   E +HS T+  +I +   D
Sbjct: 65  ISHVLAFFAASDGIVNENLAVNFLSEVQYAEAKCFYGFQVMMENIHSETYSLLIDTYIKD 124

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
             E   L N    +P +  KA WAL++                      R + F 
Sbjct: 125 PVEKDRLLNAIDTIPCVQKKAEWALRWID--------------NGSFAERLIAFA 165


>gi|298207002|ref|YP_003715181.1| probable ribonucleoside-diphosphate reductase small chain
           [Croceibacter atlanticus HTCC2559]
 gi|83849636|gb|EAP87504.1| probable ribonucleoside-diphosphate reductase small chain
           [Croceibacter atlanticus HTCC2559]
          Length = 325

 Score =  206 bits (524), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 19/176 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    +   + P+++   WE Y       W   E+ +  DL  W SK  L DDER  
Sbjct: 5   EPILQKNENRFVIFPIQHNDIWEWYKKMEACFWTAEEIDLHQDLTDWNSK--LNDDERYF 62

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+       +   E + +   Q   E +HS T+  +I +   D
Sbjct: 63  IKHILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKD 122

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           E E   LF      P+I  KA+WAL++ ++                   R + F  
Sbjct: 123 EAEKDQLFRAIEVFPAIKKKADWALKWIES--------------DSFAERLIAFAA 164


>gi|145352915|ref|XP_001420779.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581014|gb|ABO99072.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 346

 Score =  206 bits (524), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 45/176 (25%), Positives = 73/176 (41%), Gaps = 19/176 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    D   L P+K+   WE Y  A  + W   EV +  D   W     L D+E+  
Sbjct: 27  EPLLRDNPDRFCLFPIKHAKVWEMYKKAEASFWTAEEVDLTYDYRDW---ITLNDNEQHF 83

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           I   L FFA+S+ +V  N+       +  PE R +   Q   E +HS  +  ++ +   D
Sbjct: 84  ISHVLAFFAASDGIVLENLCSRFMTDVQLPEARSFYGFQLAIENIHSEMYSLLLDTYIKD 143

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             +   LF     VP++  KA+WAL++  +              +    R + F C
Sbjct: 144 PKKKSDLFRAIHTVPTVAKKADWALKWIGS-------------DASFAERLVGFAC 186


>gi|308809930|ref|XP_003082274.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
           tauri]
 gi|116060742|emb|CAL57220.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
           tauri]
          Length = 382

 Score =  206 bits (524), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 45/176 (25%), Positives = 74/176 (42%), Gaps = 19/176 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    D   L P+K+   WE Y  A  + W   EV +  D   W++   L ++E+  
Sbjct: 63  EPLLRDNPDRFCLFPIKHPRVWEMYKKAEASFWTAEEVDLTYDYKDWQT---LNENEKHF 119

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           +   L FFASS+ +V  N+       +  PE R +   Q   E +HS  +  ++ +   D
Sbjct: 120 VSHVLAFFASSDGIVLENLCSRFMSDVQLPEARSFYGFQLAIENIHSEMYSLLLDTYIKD 179

Query: 142 EG---ELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
                ELF     VP++  KA+WAL +  +              +    R + F C
Sbjct: 180 PKKKSELFRAIHTVPTVAMKADWALHWIGS-------------DASFPERLVGFAC 222


>gi|145553335|ref|XP_001462342.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124430181|emb|CAK94969.1| unnamed protein product [Paramecium tetraurelia]
          Length = 355

 Score =  206 bits (524), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 54/195 (27%), Positives = 82/195 (42%), Gaps = 21/195 (10%)

Query: 5   TGLSPIQAGEKRVNVD--DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           T LS +QA +  +N +  D+ +L    +   L P+KY   W  Y     + W   E+ + 
Sbjct: 18  TPLSNVQASQTVLNQNYCDEPLLKQNPNRFVLFPIKYNDIWNMYKQHKASFWTAEEIDLY 77

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            DL  W+    LT DE+  IK  L FFA+S+ +V  N+       +  PE R +   Q  
Sbjct: 78  QDLKDWEK---LTADEKHFIKYVLAFFAASDGIVNENLAQQFCTEVQVPEARCFYGFQIA 134

Query: 123 EEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNK 179
            E +HS T+  +I +   DE E   L +    VP I  KA WA+++              
Sbjct: 135 MENIHSETYSLLIDTYITDENEKNYLLHAIDNVPVIQKKAMWAMKWIN------------ 182

Query: 180 RRRSRILTRSLRFLC 194
                   R + F  
Sbjct: 183 -ENDSFAERLIAFAA 196


>gi|146090952|ref|XP_001466403.1| ribonucleoside-diphosphate reductase small chain [Leishmania
           infantum JPCM5]
 gi|321399462|emb|CBZ08664.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania infantum JPCM5]
          Length = 392

 Score =  206 bits (524), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 20/203 (9%)

Query: 2   ANNTGLSPIQAGEKRV---------NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNN 52
           A +  + P+ AG + +         N +++ +         L P++Y   W KY    + 
Sbjct: 43  AEDLVMKPVAAGTEVLTADKVAKGTNAEEEPLQQENPLRYVLFPIQYHDIWRKYKEQESC 102

Query: 53  HWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPE 112
            W   E+ + +D+  W +   L D ER  IK  L FFA S+ +V  N+       +  PE
Sbjct: 103 IWTVEEIDLGNDMKDWAT---LNDGERHFIKHVLAFFAGSDGIVIENLAQRFMSDVKVPE 159

Query: 113 CRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTL 169
            R +   Q   E +HS T+  ++ +   D  E   L +  + +P I  KA WA+++  + 
Sbjct: 160 ARAFYGFQLMMENIHSETYSVLLDTYITDSEEKLRLLHAIQTIPCIQKKAEWAVRWIGSS 219

Query: 170 SSPSFHYWNKRRRSRILTRSLRF 192
           +S     + +R         + F
Sbjct: 220 AS-----FQERLIGFAAVEGIFF 237


>gi|29840533|ref|NP_829639.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           caviae GPIC]
 gi|29834882|gb|AAP05517.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
           caviae GPIC]
          Length = 346

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 97/185 (52%), Positives = 132/185 (71%), Gaps = 2/185 (1%)

Query: 10  IQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           +    KRV ++ KR++N    DVNQL+P+KY WAWE YL+ C N+W+PTEVPM  D+ LW
Sbjct: 6   LGGKSKRVQLNSKRLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEVPMARDIELW 65

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           KS N L++DER +I  NLGFF+++ESLV NNIVLAI++H++NPE RQYLLRQAFEEAVH+
Sbjct: 66  KS-NDLSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHITNPEARQYLLRQAFEEAVHT 124

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
           HTF YI  SLGLDEGE+FN Y E  +I AK ++ +  T  + +P+F   +     + +  
Sbjct: 125 HTFLYICESLGLDEGEVFNAYNERATIKAKDDFQMTLTVDVLNPNFSTDSVEGLRQFIKN 184

Query: 189 SLRFL 193
            + + 
Sbjct: 185 LVGYY 189


>gi|157869457|ref|XP_001683280.1| ribonucleoside-diphosphate reductase small chain [Leishmania major
           strain Friedlin]
 gi|68224164|emb|CAJ04657.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania major strain Friedlin]
          Length = 392

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 46/195 (23%), Positives = 82/195 (42%), Gaps = 11/195 (5%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +A    + P     +  N +++ +         L P++Y   W KY    +  W   E+ 
Sbjct: 51  VAAGAEVLPADKVAEGTNAEEEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEID 110

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           + +D+  W +   L D ER  IK  L FFA S+ +V  N+       +  PE R +   Q
Sbjct: 111 LGNDMKDWAT---LNDGERHFIKHVLAFFAGSDGIVIENLAQRFMSDVKVPEARAFYGFQ 167

Query: 121 AFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYW 177
              E +HS T+  ++ +   D  E   L +  + +P I  KA WA+++  + +S     +
Sbjct: 168 LMMENIHSETYSVLLDTYITDSEEKLRLLHAIQTIPCIQKKAEWAVRWIGSSAS-----F 222

Query: 178 NKRRRSRILTRSLRF 192
            +R         + F
Sbjct: 223 QERLIGFAAVEGIFF 237


>gi|323337103|gb|EGA78359.1| Rnr2p [Saccharomyces cerevisiae Vin13]
          Length = 296

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 17/176 (9%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +LN   +   L P+KY   W+ Y  A  + W   E+ +  D+  W   N + ++ER 
Sbjct: 75  EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWN--NRMNENERF 132

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I R L FFA+S+ +V  N+V      +  PE + +   Q   E +HS T+  +I +   
Sbjct: 133 FISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIK 192

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           D  E   LFN    +P I  KA WAL++ Q               +    R + F 
Sbjct: 193 DPKESEFLFNAIHTIPEIGEKAEWALRWIQ------------DADALFGERLVAFA 236


>gi|163753569|ref|ZP_02160692.1| ribonucleoside-diphosphate reductase 1, beta subunit [Kordia
           algicida OT-1]
 gi|161325783|gb|EDP97109.1| ribonucleoside-diphosphate reductase 1, beta subunit [Kordia
           algicida OT-1]
          Length = 326

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 52/174 (29%), Positives = 81/174 (46%), Gaps = 11/174 (6%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    D   + P+K+   WE Y  +  + W   E+ +  DL  W +K  L DDER  
Sbjct: 6   EPILQENKDRFVIFPIKHADIWEWYKKSEASFWTAEEIDLHQDLTDWTTK--LNDDERYF 63

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+       +   E + +   Q   E +HS T+  +I +   D
Sbjct: 64  IKHILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKD 123

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           E E   LF      P+I  KA+WALQ+ ++   PSF    +R  +      + F
Sbjct: 124 EAEKDKLFKAIENFPAIKKKADWALQWIES---PSF---AERLIAFAAVEGIFF 171


>gi|212723480|ref|NP_001131892.1| hypothetical protein LOC100193273 [Zea mays]
 gi|194692834|gb|ACF80501.1| unknown [Zea mays]
 gi|195624040|gb|ACG33850.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
          Length = 339

 Score =  205 bits (523), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 45/176 (25%), Positives = 73/176 (41%), Gaps = 18/176 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L   SD   + P+++   WE Y  A  + W   EV +  D   W     L+ DER  
Sbjct: 15  EPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSADARHWDE--ALSPDERHF 72

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           I   L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  ++ +   D
Sbjct: 73  ISHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIRD 132

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + E   LF     VP++  KA+WA+++                  R   R + F C
Sbjct: 133 DVEKDRLFRAIDTVPAVRRKADWAMRWIDGGE-------------RFAERLVAFAC 175


>gi|18640102|ref|NP_570176.1| SPV016 ribonucleotide reductase, small subunit [Swinepox virus]
 gi|18448509|gb|AAL69755.1| SPV016 ribonucleotide reductase, small subunit [Swinepox virus]
          Length = 320

 Score =  205 bits (522), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 6/150 (4%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L        + P+KY   W+ Y  +  + W   EV +  DL  W   + LT DE+  
Sbjct: 2   EPILQESDSRFVIFPIKYHDIWKMYKQSVASFWTVEEVDLSKDLDDW---DKLTKDEKYF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFASS+ +V  N+    Y  +   E R +   Q   E +HS  +  +I +   D
Sbjct: 59  IKHILAFFASSDGIVNENLAERFYVDVQCSEARCFYGFQIAMENIHSEMYSLLIDTYVRD 118

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQT 168
             E   LFN    +  +  KA+WA ++  +
Sbjct: 119 NIEKMHLFNAIETMECVKKKADWARKWISS 148


>gi|46446983|ref|YP_008348.1| ribonucleoside-diphosphate reductase small chain [Candidatus
           Protochlamydia amoebophila UWE25]
 gi|46400624|emb|CAF24073.1| probable ribonucleoside-diphosphate reductase small chain
           [Candidatus Protochlamydia amoebophila UWE25]
          Length = 323

 Score =  205 bits (522), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 45/176 (25%), Positives = 73/176 (41%), Gaps = 19/176 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    D   L P+ +   W+ Y  A  + W   E+ +  DL  W  K  L +DE+  
Sbjct: 5   EPILRENKDRFVLFPINHAEIWQMYKKAEASFWTAEEIDLTSDLLDWDRK--LNNDEKYF 62

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+ +     +  PE R +   Q   E +HS  +  +I +   D
Sbjct: 63  IKHILAFFAASDGIVNENLAVNFMSEVQYPEARCFYGFQIMMENIHSEAYSLLIDTYIKD 122

Query: 142 E---GELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
                 LF     +P I+ KA+WAL++                +     R + F  
Sbjct: 123 PTDKNRLFKALETIPCISNKADWALRWI--------------SQGSFSERLVAFAA 164


>gi|170664480|gb|ACB28637.1| small subunit ribonucleotide reductase [Myxoma virus]
 gi|170664652|gb|ACB28808.1| small subunit ribonucleotide reductase [recombinant virus
           6918VP60-T2]
          Length = 322

 Score =  205 bits (522), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 45/178 (25%), Positives = 75/178 (42%), Gaps = 18/178 (10%)

Query: 19  VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
           ++D+ +L    D   + P++Y   W  Y  A  + W P EV +  DL  W+    LT DE
Sbjct: 1   MEDEPVLKESLDRYVVFPIQYNDIWNMYKKAVASFWTPEEVDISKDLKDWR---VLTPDE 57

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           +  IK  L FFA+S+ +V  N+    Y  +   E R +   Q   E +HS  +  +I + 
Sbjct: 58  KYFIKHILAFFAASDGIVNENLAERFYVEVQIAEARCFYGFQIAMENIHSEMYSLLIDTY 117

Query: 139 GLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            ++  E   LF     +  I  KA W  ++ +             + +    R + F 
Sbjct: 118 IINLQEKEKLFKAIETMDCIKQKAEWVQKWIRN------------KDATYAERLIAFA 163


>gi|307192386|gb|EFN75622.1| Ribonucleoside-diphosphate reductase subunit M2 [Harpegnathos
           saltator]
          Length = 344

 Score =  205 bits (522), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 50/183 (27%), Positives = 82/183 (44%), Gaps = 10/183 (5%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD-DLALWKSKN 72
           ++  N D + +L    +   + P++Y   W+ Y  A  + W   EVP+   D   W+ K 
Sbjct: 10  KEEFNPDLEPLLQEEPNRFVIFPIRYPDIWDMYKKAVASFWTIEEVPLHKLDKKDWEEK- 68

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
            L  DER  I   L FFA+S+ +V  N++    + +   E R +   Q   E +HS  + 
Sbjct: 69  -LNSDERYFISHVLAFFAASDGIVNENLIERFCQEVKISEARCFYGFQIAIENIHSEMYS 127

Query: 133 YIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRS 189
            +I +   D  E   LFN    +P +T KANWAL +    S+     + +R  +      
Sbjct: 128 LLIETYISDLKEKDFLFNAIETLPCVTKKANWALNWINHESA----TFPERIVAFAAVEG 183

Query: 190 LRF 192
           + F
Sbjct: 184 IFF 186


>gi|9633826|ref|NP_051904.1| gp015L [Rabbit fibroma virus]
 gi|6578545|gb|AAF17899.1|AF170722_17 gp015L [Rabbit fibroma virus]
          Length = 322

 Score =  205 bits (522), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 46/178 (25%), Positives = 75/178 (42%), Gaps = 18/178 (10%)

Query: 19  VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
           ++D+ +L    D   + P++Y   W+ Y  A  + W P EV +  DL  W     LT DE
Sbjct: 1   MEDEPVLKESLDRYVVFPIQYNDIWKMYKKAVASFWTPEEVDISKDLKDWH---ILTSDE 57

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           +  IK  L FFA+S+ +V  N+    Y  +   E R +   Q   E +HS  +  +I + 
Sbjct: 58  KYFIKHILAFFAASDGIVNENLAERFYVEVQIAEARCFYGFQIAIENIHSEMYSLLIDTY 117

Query: 139 GLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            +D  E   LF     +  I  KA W  ++ +             + +    R + F 
Sbjct: 118 IIDIQEKEKLFKAIETMDCIKQKAEWVQKWIRN------------KDATYAERLIAFA 163


>gi|307171465|gb|EFN63309.1| Ribonucleoside-diphosphate reductase subunit M2 [Camponotus
           floridanus]
          Length = 343

 Score =  205 bits (521), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 7/175 (4%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           ++    +  +Q  E+  N + + +L    +   + P++Y   W+ Y  A  + W   EVP
Sbjct: 42  LSKTKAVQKVQLKEE-FNPELEPLLQEGPNRFVIFPIQYPDIWDMYKKAVASFWTIEEVP 100

Query: 61  MQD-DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLR 119
           +   D   W+ K  L  DER  I   L FFA+S+ +V  N++    + +   E R +   
Sbjct: 101 LHKLDKKDWEEK--LNSDERYFISHVLAFFAASDGIVNENLIERFSQEVKIAEARCFYGF 158

Query: 120 QAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           Q   E +HS  +  +I +   D  E   LFN    +PS+  KANWAL +    S+
Sbjct: 159 QIAIENIHSEMYSLLIETYISDPKEKDFLFNAIETLPSVGKKANWALNWINHESA 213


>gi|50286273|ref|XP_445565.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524870|emb|CAG58476.1| unnamed protein product [Candida glabrata]
          Length = 400

 Score =  205 bits (521), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 53/188 (28%), Positives = 79/188 (42%), Gaps = 17/188 (9%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           +   E +    D+ +LN   D   L P+KY   W+ Y  A  + W   E+ +  DL  W 
Sbjct: 64  VHRHELKELEKDEPLLNDDPDRLTLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDLHDWN 123

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
             N L ++ER  I R L FFA+S+ +V  N+V         PE + +   Q   E +HS 
Sbjct: 124 --NRLNENERFFISRVLAFFAASDGIVNENLVENFSTEAVIPEAKAFYGFQIMIENIHSE 181

Query: 130 TFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRIL 186
           T+  +I +   D  E   LFN    +P I  KA WAL++                 +   
Sbjct: 182 TYSLLIDTYIKDPKESEFLFNAIHTIPEIGEKAEWALRWIANSE------------ALFA 229

Query: 187 TRSLRFLC 194
            R + F  
Sbjct: 230 ERLVAFAA 237


>gi|322493026|emb|CBZ28311.1| ribonucleoside-diphosphate reductase small chain,putative
           [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 388

 Score =  205 bits (521), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 46/195 (23%), Positives = 81/195 (41%), Gaps = 11/195 (5%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +A    + P     +  N +++ +         L P++Y   W KY    +  W   E+ 
Sbjct: 47  VAPGAEVLPADKVAEGTNAEEEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEID 106

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           + +D+  W     L D ER  IK  L FFA S+ +V  N+       +  PE R +   Q
Sbjct: 107 LGNDMKDWA---ALNDGERHFIKHVLAFFAGSDGIVVENLAQRFMSDVKVPEARAFYGFQ 163

Query: 121 AFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYW 177
              E +HS T+  ++ +   D  E   L +  + +P I  KA WA+++  + +S     +
Sbjct: 164 LMMENIHSETYSVLLDTYITDSEEKLRLLHAIQTIPCIQRKAEWAVRWIGSSAS-----F 218

Query: 178 NKRRRSRILTRSLRF 192
            +R         + F
Sbjct: 219 QERLIGFAAVEGIFF 233


>gi|223996990|ref|XP_002288168.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220975276|gb|EED93604.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 335

 Score =  205 bits (521), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 47/191 (24%), Positives = 79/191 (41%), Gaps = 18/191 (9%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           +S  +  E      ++ +L        L P+K    W+ Y  A  + W   E+ + +DL 
Sbjct: 1   MSDHRRAESEGRHAEEPLLKENPGRFVLFPIKEPEIWKMYKKAEASFWTAEEIDLAEDLK 60

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            W+S   L+ +ER  +   L FFA+S+ +V  N+       +++ E R +   Q   E +
Sbjct: 61  DWES---LSINERHFVSHVLAFFAASDGIVNENLTGNFSTEVTSAEARCFYGFQIAVENI 117

Query: 127 HSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRS 183
           HS T+  +I +   D  E   L N    VP +  KANWAL++                 +
Sbjct: 118 HSETYSLLIDTYIKDAQEKDHLLNAIETVPCVQKKANWALRWCDA------------GNA 165

Query: 184 RILTRSLRFLC 194
               R + F  
Sbjct: 166 SFAERCIAFAA 176


>gi|156340310|ref|XP_001620415.1| hypothetical protein NEMVEDRAFT_v1g148226 [Nematostella vectensis]
 gi|156205304|gb|EDO28315.1| predicted protein [Nematostella vectensis]
          Length = 224

 Score =  205 bits (521), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 19/176 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    D   + P+K+   WE Y     + W   E+ +  D+  W +K  L +DE+  
Sbjct: 5   EPILQENKDRFVIFPIKHHDIWEWYKKMEASFWTAEEIDLHQDITDWNTK--LNEDEKYF 62

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+       +   E + +   Q   E +HS T+  +I +   D
Sbjct: 63  IKHILAFFAASDGIVNENLAENFVNEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKD 122

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           E E   LF+     P+I  KA WAL++ ++                   R + F  
Sbjct: 123 EVEKDKLFHAIEVFPAIKRKAEWALKWIES--------------DSFAERLIAFAA 164


>gi|323452425|gb|EGB08299.1| hypothetical protein AURANDRAFT_59025 [Aureococcus anophagefferens]
          Length = 319

 Score =  205 bits (521), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 9/172 (5%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           ML   S    L P+++   W+ Y  A  + W   EV +  D+  W +K  L D ER  IK
Sbjct: 1   MLAVNSLRFVLFPIEHDDIWQMYKQAEASFWTAEEVDLCHDVQHWDTK--LNDKERHFIK 58

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD-- 141
             L FFA+S+ +V  N+       +  PE R +   Q   E +HS  +  +I +   D  
Sbjct: 59  HVLAFFAASDGIVNENLAQNFATEVQWPEARCFYGFQIAIENIHSEVYSLLIDTYIRDAQ 118

Query: 142 -EGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
            + E       +P +  KA WAL++      P    + +R  +      + F
Sbjct: 119 KKHECLTAIDTMPCVAEKAQWALRWC----DPDHASFTERLLAFAAVEGIFF 166


>gi|33242353|ref|NP_877294.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           pneumoniae TW-183]
 gi|33236864|gb|AAP98951.1| ribonucleoside reductase small chain [Chlamydophila pneumoniae
           TW-183]
          Length = 365

 Score =  205 bits (521), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 97/185 (52%), Positives = 129/185 (69%), Gaps = 2/185 (1%)

Query: 10  IQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           +    KRV V  K ++N    DVNQL+P+KY WAWE YL+ C N+W+PTEVPM  D+ LW
Sbjct: 25  LDGKLKRVEVSKKGLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEVPMARDIELW 84

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           KS + L++DER +I  NLGFF+++ESLV NNIVLAI++H++NPE RQYLLRQAFEEAVH+
Sbjct: 85  KS-DELSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHITNPEARQYLLRQAFEEAVHT 143

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
           HTF YI  SLGLDEGE+FN Y E  SI AK ++ +  T  +  P+F   +     + +  
Sbjct: 144 HTFLYICESLGLDEGEVFNAYNERASIRAKDDFQMTLTVDVLDPNFSVQSSEGLGQFIKN 203

Query: 189 SLRFL 193
            + + 
Sbjct: 204 LVGYY 208


>gi|291412327|ref|XP_002722439.1| PREDICTED: ribonucleotide reductase M2 polypeptide [Oryctolagus
           cuniculus]
          Length = 400

 Score =  204 bits (520), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 42/196 (21%), Positives = 80/196 (40%), Gaps = 12/196 (6%)

Query: 2   ANNTGLSPIQAGEKRV--NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEV 59
           A  T ++ ++     +   + D+           +L ++    W +      + W   EV
Sbjct: 59  APGTQMAAVRQKSPALASGMGDESGRRENPCRFSILTIESYGIWTRNKKGEASFWTAEEV 118

Query: 60  PMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLR 119
            +  D+  W+    L ++ER  I   L FFA+S+ +V  N+V    + +   E R +   
Sbjct: 119 DLSKDIQHWE---ALKEEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGF 175

Query: 120 QAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHY 176
           Q   E +HS  +  +I +   D  E   LFN    +P +  KA+WAL++     +     
Sbjct: 176 QIAMENIHSEMYSLLIDTYIKDPKEREFLFNAIETMPCVKKKADWALRWIGDKEA----T 231

Query: 177 WNKRRRSRILTRSLRF 192
           + +R  +      + F
Sbjct: 232 YGERVVAFAAVEGIFF 247


>gi|225432510|ref|XP_002279943.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 340

 Score =  204 bits (520), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 19/183 (10%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
                +++ +L   S    + P++Y   WE Y  A  + W   EV +  D+  W+S   L
Sbjct: 12  PDEEQEEEPILMKNSQRFCMFPIRYRQLWEMYKKAEASFWTAEEVDLSHDVQQWES---L 68

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           ++ E+  I   L FFA+S+ +V  N+       +  PE R +   Q   E +HS  +  +
Sbjct: 69  SNSEKHFISHVLAFFAASDGIVLENLAARFLHDIQIPEARAFYGFQIAMENIHSEMYSLL 128

Query: 135 ITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           + +   D  E   LFN    +  +  KA WAL + Q+ +                 R + 
Sbjct: 129 LETYIKDSKEKHRLFNAIESISCVAGKAKWALDWIQSST-------------LFAERLIA 175

Query: 192 FLC 194
           F C
Sbjct: 176 FAC 178


>gi|325286576|ref|YP_004262366.1| Ribonucleoside-diphosphate reductase [Cellulophaga lytica DSM 7489]
 gi|324322030|gb|ADY29495.1| Ribonucleoside-diphosphate reductase [Cellulophaga lytica DSM 7489]
          Length = 328

 Score =  204 bits (520), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 19/176 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    D   + P+K+   W+ Y     + W   E+ +  DL  WK+K  L DDER  
Sbjct: 6   EPILEKNEDRFVIFPIKHNDLWDWYKKCEASFWTAEEIDLHADLDDWKNK--LNDDERYF 63

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+       +   E + +   Q   E +HS T+  +I +   D
Sbjct: 64  IKHILAFFAASDGIVNENLAENFVSEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKD 123

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           E E   LF+     P+I  KA+WAL++ ++ S                 R + F  
Sbjct: 124 EKEKDILFHALENFPAIRKKADWALKWIESPS--------------FAERLIAFAA 165


>gi|73544537|ref|XP_848163.1| ribonucleoside-diphosphate reductase small chain [Leishmania major
           strain Friedlin]
 gi|321438516|emb|CBZ12275.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania major strain Friedlin]
          Length = 388

 Score =  204 bits (520), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 46/195 (23%), Positives = 82/195 (42%), Gaps = 11/195 (5%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +A    + P     +  N +++ +         L P++Y   W KY    +  W   E+ 
Sbjct: 47  VAAGAEVLPADKVAEGTNAEEEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEID 106

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           + +D+  W +   L D ER  IK  L FFA S+ +V  N+       +  PE R +   Q
Sbjct: 107 LGNDMKDWAT---LNDGERHFIKHVLAFFAGSDGIVIENLAQRFMSDVKVPEARAFYGFQ 163

Query: 121 AFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYW 177
              E +HS T+  ++ +   D  E   L +  + +P I  KA WA+++  + +S     +
Sbjct: 164 LMMENIHSETYSVLLDTYITDSEEKLRLLHAIQTIPCIQKKAEWAVRWIGSSAS-----F 218

Query: 178 NKRRRSRILTRSLRF 192
            +R         + F
Sbjct: 219 QERLIGFAAVEGIFF 233


>gi|327403795|ref|YP_004344633.1| Ribonucleoside-diphosphate reductase [Fluviicola taffensis DSM
           16823]
 gi|327319303|gb|AEA43795.1| Ribonucleoside-diphosphate reductase [Fluviicola taffensis DSM
           16823]
          Length = 324

 Score =  204 bits (520), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 44/179 (24%), Positives = 77/179 (43%), Gaps = 19/179 (10%)

Query: 19  VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
            + + +L+   +   L P+++   W  Y  A  + W   E+ +  DL  W++K  L+DDE
Sbjct: 2   ANAEPILSENKNRFVLFPIQHEDIWSFYKKAEASFWTAEEIDLSPDLIDWETK--LSDDE 59

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           R  +K  L FFA+S+ +V  N+       +   E + +   Q   E +HS T+  +I + 
Sbjct: 60  RHFVKHVLAFFAASDGIVNENLAEHFLAEVQYTEAKFFYGFQVAMENIHSETYSLLIDTY 119

Query: 139 GLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             D+ E   LFN    +  +  KA+WAL++                      R + F  
Sbjct: 120 IKDQKEKNHLFNALDTIDCVRKKADWALRWID--------------NGSFAERLVAFAA 164


>gi|146090970|ref|XP_001466408.1| ribonucleoside-diphosphate reductase small chain [Leishmania
           infantum JPCM5]
 gi|134070770|emb|CAM69127.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania infantum JPCM5]
          Length = 388

 Score =  204 bits (519), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 48/203 (23%), Positives = 85/203 (41%), Gaps = 20/203 (9%)

Query: 2   ANNTGLSPIQAGEKRV---------NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNN 52
             N  + P+ AG + +         N +++ +         L P++Y   W KY    + 
Sbjct: 39  TENLVMKPVAAGAEVLTADKVAEGTNAEEEPLQQENPFRYVLFPIQYHDIWRKYKEQESC 98

Query: 53  HWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPE 112
            W   E+ + +D+  W +   L D ER  IK  L FFA S+ +V  N+       +  PE
Sbjct: 99  IWTVEEIDLGNDMKDWAT---LNDGERHFIKHVLAFFAGSDGIVIENLAQRFMSDVKVPE 155

Query: 113 CRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTL 169
            R +   Q   E +HS T+  ++ +   D  E   L +  + +P I  KA WA+++  + 
Sbjct: 156 ARAFYGFQLMMENIHSETYSVLLDTYITDSEEKLRLLHAIQTIPCIQKKAEWAVRWIGSS 215

Query: 170 SSPSFHYWNKRRRSRILTRSLRF 192
           +S     + +R         + F
Sbjct: 216 AS-----FQERLIGFAAVEGIFF 233


>gi|3220181|gb|AAC23560.1| ribonucleotide reductase M2 subunit [Leishmania amazonensis]
          Length = 354

 Score =  204 bits (519), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 46/195 (23%), Positives = 81/195 (41%), Gaps = 11/195 (5%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +A    + P     +  N +++ +         L P++Y   W KY    +  W   E+ 
Sbjct: 13  VAAGAEVLPADKVAEGTNAEEEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEID 72

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           + +D+  W     L D ER  IK  L FFA S+ +V  N+       +  PE R +   Q
Sbjct: 73  LGNDMKDWA---ALNDGERHFIKHVLAFFAGSDGIVVENLAQRFMSDVKVPEARAFYGFQ 129

Query: 121 AFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYW 177
              E +HS T+  ++ +   D  E   L +  + +P I  KA WA+++  + +S     +
Sbjct: 130 LMMENIHSETYSVLLDTYITDSEEKLRLLHAIQTIPCIQRKAEWAVRWIGSSAS-----F 184

Query: 178 NKRRRSRILTRSLRF 192
            +R         + F
Sbjct: 185 QERLIGFAAVEGIFF 199


>gi|8101697|gb|AAF72618.1|AF252539_2 ribonucleotide reductase small subunit M2 [Leishmania amazonensis]
          Length = 345

 Score =  204 bits (519), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 46/195 (23%), Positives = 82/195 (42%), Gaps = 11/195 (5%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +A    + P     +  N +++ +         L P++Y   W KY    +  W   E+ 
Sbjct: 4   VAAGAEVLPADKVAQGTNAEEEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEID 63

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           + +D+  W +   L D ER  IK  L FFA S+ +V  N+       +  PE R +   Q
Sbjct: 64  LGNDMKDWAT---LNDGERHFIKHVLAFFAGSDGIVIENLAQRFMSDVKVPEARAFYGFQ 120

Query: 121 AFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYW 177
              E +HS T+  ++ +   D  E   L +  + +P I  KA WA+++  + +S     +
Sbjct: 121 LMMENIHSETYSVLLDTYITDSEEKLRLLHAIQTIPCIQKKAEWAVRWIGSSAS-----F 175

Query: 178 NKRRRSRILTRSLRF 192
            +R         + F
Sbjct: 176 QERLIGFAAVEGIFF 190


>gi|297449|emb|CAA46231.1| ribonucleotide reductase, small subunit [Schizosaccharomyces pombe]
 gi|447147|prf||1913428B ribonucleotide reductase:SUBUNIT=small
          Length = 391

 Score =  204 bits (519), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 17/183 (9%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K+ +  D+ +L        L P+KY   W+ Y  A  + W   E+ +  DL  W +K  L
Sbjct: 59  KKEDELDEVVLRPNPHRFVLFPIKYHEIWQFYKKAEASFWTAEEIDLSKDLVDWDNK--L 116

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
             DER  I   L +FA+S+ +V  N++      +  PE R     Q   E +HS T+  +
Sbjct: 117 NADERYFISTVLAYFAASDGIVNENLLERFSSEVQIPEARCVYGFQIMIENIHSETYSLL 176

Query: 135 ITSLGLDEGEL---FNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           + +   +  E    F+    + SI AKA WAL++                 S    R + 
Sbjct: 177 LDTYIREPKEKQRHFDAILTMGSIKAKAKWALRWIN------------DEDSTYAIRLVA 224

Query: 192 FLC 194
           F  
Sbjct: 225 FAA 227


>gi|159899093|ref|YP_001545340.1| ribonucleotide-diphosphate reductase subunit beta [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159892132|gb|ABX05212.1| Ribonucleoside-diphosphate reductase [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 342

 Score =  204 bits (519), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 97/180 (53%), Positives = 126/180 (70%), Gaps = 2/180 (1%)

Query: 15  KRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
            R N  DKR++N    DVNQL+PL+YGWAWE YL+ C NHWMP EV M  D+A+W+S   
Sbjct: 6   GRFNASDKRLINCNQVDVNQLMPLRYGWAWEHYLNGCANHWMPNEVSMTGDIAIWRS-TS 64

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           L+ DERLM+ RNLGFFA++ESLV NNIVLAI+RH++N ECRQYLLRQAFEEA+H+H F +
Sbjct: 65  LSADERLMVLRNLGFFATAESLVGNNIVLAIFRHITNAECRQYLLRQAFEEAIHTHAFLH 124

Query: 134 IITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           I+ SLGL+E E+FNMY E+P I+ K  + +Q T  +  P F           +   + + 
Sbjct: 125 IVESLGLNEREIFNMYHEIPVISQKDQFEMQLTAAVLDPQFSTETLTGMQTFVKNLIGYY 184


>gi|225010999|ref|ZP_03701465.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
           MS024-3C]
 gi|225004906|gb|EEG42862.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
           MS024-3C]
          Length = 328

 Score =  204 bits (519), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 11/174 (6%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    D   + P+K+   WE Y       W   E+ + +DL  W +K  L +DER  
Sbjct: 6   EPILTENPDRFVIFPIKHDDLWEWYKKCEACFWTAEEIDLSEDLNDWNNK--LNEDERYF 63

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           +K  L FFA+S+ +V  N+       +   E + +   Q   E +HS T+  +I +   D
Sbjct: 64  VKHILAFFAASDGIVNENLAENFVSEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKD 123

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           E E   LF      P+I  KA+WAL++ ++   PSF    +R  +      + F
Sbjct: 124 EKEKNKLFKALENFPAIKEKADWALKWIES---PSF---AERLIAFAAVEGIFF 171


>gi|19113338|ref|NP_596546.1| ribonucleotide reductase small subunit Suc22 [Schizosaccharomyces
           pombe 972h-]
 gi|9297110|sp|P36603|RIR2_SCHPO RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|3378511|emb|CAA20100.1| ribonucleotide reductase small subunit Suc22 [Schizosaccharomyces
           pombe]
          Length = 391

 Score =  203 bits (518), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 17/183 (9%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K+ +  D+ +L        L P+KY   W+ Y  A  + W   E+ +  DL  W +K  L
Sbjct: 59  KKEDELDEVVLRPNPHRFVLFPIKYHEIWQFYKKAEASFWTAEEIDLSKDLVDWDNK--L 116

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
             DER  I   L +FA+S+ +V  N++      +  PE R     Q   E +HS T+  +
Sbjct: 117 NADERYFISTVLAYFAASDGIVNENLLERFSSEVQIPEARCVYGFQIMIENIHSETYSLL 176

Query: 135 ITSLGLDEGEL---FNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           + +   +  E    F+    + SI AKA WAL++                 S    R + 
Sbjct: 177 LDTYIREPKEKQRHFDAILTMGSIKAKAKWALRWIN------------DEDSTYAIRLVA 224

Query: 192 FLC 194
           F  
Sbjct: 225 FAA 227


>gi|301117384|ref|XP_002906420.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
           infestans T30-4]
 gi|262107769|gb|EEY65821.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
           infestans T30-4]
          Length = 379

 Score =  203 bits (518), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 10/192 (5%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
           N  +S  +  E    +  +  L    +   L P++    W+ Y  A  + W   E+ +  
Sbjct: 42  NLEMSEFKRKEMNGEIPIEPFLVENPNRFVLFPIQEHEVWQMYKKAEASFWTAEELDLVH 101

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           DL  W   + LTD+ER  IK  L FFA+S+ +V  N+ +     +  PE R +   Q   
Sbjct: 102 DLKDW---SKLTDNERHFIKHVLAFFAASDGIVNENLAMNFSNEVQVPEARCFYGFQIAI 158

Query: 124 EAVHSHTFQYIITSLGLD---EGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           E +HS  +  +I +   D   +  L      +P +T KA+WA+++      P    + +R
Sbjct: 159 ENIHSEVYSLLIDTYIKDAIEKDHLLRAIETIPCVTKKAHWAIKWC----DPRVSSYPER 214

Query: 181 RRSRILTRSLRF 192
             +      + F
Sbjct: 215 LLAFAAVEGIFF 226


>gi|120437796|ref|YP_863482.1| ribonucleoside-diphosphate reductase small chain [Gramella forsetii
           KT0803]
 gi|117579946|emb|CAL68415.1| ribonucleoside-diphosphate reductase small chain [Gramella forsetii
           KT0803]
          Length = 325

 Score =  203 bits (518), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 19/176 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    D   + P+K+   W+ Y       W   E+ + +DL+ W +K  L+ DER  
Sbjct: 5   EPILQENKDRFVIFPIKHHDIWDWYKKMEACFWTAEEIDLHEDLSDWNNK--LSADERYF 62

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           +K  L FFA+S+ +V  N+       +   E + +   Q   E +HS T+  +I +   +
Sbjct: 63  LKHILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKN 122

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           E E   LF      P+I  KA+WAL++ ++                   R + F  
Sbjct: 123 EKEKDQLFKAIEVFPAIKKKADWALKWIES--------------DSFAERLIAFAA 164


>gi|15618893|ref|NP_225179.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           pneumoniae CWL029]
 gi|15836516|ref|NP_301040.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           pneumoniae J138]
 gi|16752043|ref|NP_445409.1| ribonucleotide-diphosphate reductase subunit beta [Chlamydophila
           pneumoniae AR39]
 gi|14195165|sp|Q9Z6S4|RIR2_CHLPN RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|4377313|gb|AAD19122.1| Ribonucleoside Reductase, Small Chain [Chlamydophila pneumoniae
           CWL029]
 gi|7189783|gb|AAF38660.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
           pneumoniae AR39]
 gi|8979358|dbj|BAA99192.1| ribonucleoside reductase, small chain [Chlamydophila pneumoniae
           J138]
 gi|269302786|gb|ACZ32886.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
           pneumoniae LPCoLN]
          Length = 346

 Score =  203 bits (517), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 97/185 (52%), Positives = 129/185 (69%), Gaps = 2/185 (1%)

Query: 10  IQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           +    KRV V  K ++N    DVNQL+P+KY WAWE YL+ C N+W+PTEVPM  D+ LW
Sbjct: 6   LDGKLKRVEVSKKGLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEVPMARDIELW 65

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           KS + L++DER +I  NLGFF+++ESLV NNIVLAI++H++NPE RQYLLRQAFEEAVH+
Sbjct: 66  KS-DELSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHITNPEARQYLLRQAFEEAVHT 124

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
           HTF YI  SLGLDEGE+FN Y E  SI AK ++ +  T  +  P+F   +     + +  
Sbjct: 125 HTFLYICESLGLDEGEVFNAYNERASIRAKDDFQMTLTVDVLDPNFSVQSSEGLGQFIKN 184

Query: 189 SLRFL 193
            + + 
Sbjct: 185 LVGYY 189


>gi|217071966|gb|ACJ84343.1| unknown [Medicago truncatula]
          Length = 206

 Score =  203 bits (517), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 22/194 (11%)

Query: 7   LSPIQAGEK---RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
           +  ++ G     R    ++ +L  ++    + P++Y   WE Y  A  + W   EV +  
Sbjct: 1   MGSLENGTPKKIREEETEEPILMKQTQRFCMFPVRYKQLWEMYKKAEASFWTAEEVDLSY 60

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D+  W +   L+D E+  I   L FFA+S+ +V  N+       +  PE R +   Q   
Sbjct: 61  DVQHWAT---LSDSEKHFISHVLAFFATSDGIVLENLAARFLNDVQIPEARAFYGFQIAI 117

Query: 124 EAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           E +HS  +  ++ +   D  E   LFN    +P +  KA WAL +  + +S         
Sbjct: 118 ENIHSEMYSLLLETYIKDSREKHKLFNAIENLPCVARKAEWALSWINSSTS--------- 168

Query: 181 RRSRILTRSLRFLC 194
                  R + F C
Sbjct: 169 ----FAERLVGFAC 178


>gi|167519412|ref|XP_001744046.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778008|gb|EDQ91624.1| predicted protein [Monosiga brevicollis MX1]
          Length = 329

 Score =  203 bits (516), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 10/178 (5%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
            +  + +L A      +LP+++   W+ Y  A  + W   EV +  DL  W   N L  D
Sbjct: 6   EIQAEPLLRANPRRFVILPIQHDAIWKMYKKAEASFWTVEEVDLGRDLVDW---NKLNKD 62

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+  IK  L FFA+S+ +V  N+V      +  PE R +   Q   E +HS  +  +I +
Sbjct: 63  EQFFIKHVLAFFAASDGIVNENLVERFMTEVQLPEARCFYGFQIAIENIHSEMYSRLIET 122

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
              D  E   LFN    +P++  KA WA+++     S     + +R  +      + F
Sbjct: 123 YVNDSAEKDSLFNAIETLPAVRRKAEWAMRWI----SHDKASFGERVVAFAAVEGIFF 176


>gi|305665630|ref|YP_003861917.1| putative ribonucleoside-diphosphate reductase small chain
           [Maribacter sp. HTCC2170]
 gi|88710386|gb|EAR02618.1| probable ribonucleoside-diphosphate reductase small chain
           [Maribacter sp. HTCC2170]
          Length = 328

 Score =  203 bits (516), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 11/174 (6%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    D   + P+++   WE Y       W   E+ +  DL  W +K  L DDE+  
Sbjct: 6   EPILQENKDRFVIFPIQHHDLWEWYKKQEACIWTAEEIDLHQDLTDWNTK--LNDDEKYF 63

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+       +   E + +   Q   E +HS T+  +I +   D
Sbjct: 64  IKHILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKD 123

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           + E   LF      P+I  KA+WAL++ ++   PSF    +R  +      + F
Sbjct: 124 DKEKDILFKAIENFPAIKKKADWALKWIES---PSF---AERLIAFAAVEGIFF 171


>gi|319953269|ref|YP_004164536.1| ribonucleoside-diphosphate reductase [Cellulophaga algicola DSM
           14237]
 gi|319421929|gb|ADV49038.1| Ribonucleoside-diphosphate reductase [Cellulophaga algicola DSM
           14237]
          Length = 326

 Score =  203 bits (516), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 11/174 (6%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    D   + P+++   WE Y       W   E+ + +D   W +K  L DDER  
Sbjct: 5   EPILQENKDRFVIFPIQHNDLWEWYKKQEACIWTAEEIDLSEDANDWNNK--LNDDERYF 62

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+       +   E + +   Q   E +HS T+  +I +   D
Sbjct: 63  IKHILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKD 122

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           E E   LF      P+I  KA+WAL++  +   PSF    +R  +      + F
Sbjct: 123 EKEKTVLFQAIENFPAIKKKADWALKWIDS---PSF---AERLIAFAAVEGIFF 170


>gi|154337607|ref|XP_001565036.1| ribonucleoside-diphosphate reductase small chain [Leishmania
           braziliensis MHOM/BR/75/M2904]
 gi|134062075|emb|CAM45178.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 392

 Score =  203 bits (516), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 47/203 (23%), Positives = 83/203 (40%), Gaps = 20/203 (9%)

Query: 2   ANNTGLSPIQAGEKRV---------NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNN 52
           A +  + PI    + +         N +++ +         L P++Y   W KY    + 
Sbjct: 43  AEDLVIKPIATDAEVLLADKVAEGTNAEEEPLQQENPFRYVLFPIQYHDIWRKYKEQESC 102

Query: 53  HWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPE 112
            W   E+ + +D+  W     L D ER  IK  L FFA S+ +V  N+       +  PE
Sbjct: 103 IWTVEEIDLGNDMKDW---VALNDGERHFIKHVLAFFAGSDGIVVENLAQRFMSDVKVPE 159

Query: 113 CRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTL 169
            R +   Q   E +HS T+  ++ +   D  E   L +  + +P I  KA WA+++  + 
Sbjct: 160 ARAFYGFQLMMENIHSETYSVLLDTYITDSEEKLRLLHAIQTIPCIQKKAEWAVRWIGSS 219

Query: 170 SSPSFHYWNKRRRSRILTRSLRF 192
           +S     + +R         + F
Sbjct: 220 AS-----FQERLIGFAAVEGIFF 237


>gi|19074323|ref|NP_585829.1| RIBONUCLEOSIDE DIPHOSPHATE REDUCTASE SMALL CHAIN [Encephalitozoon
           cuniculi GB-M1]
 gi|51701822|sp|Q8SRR2|RIR2_ENCCU RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|19068965|emb|CAD25433.1| RIBONUCLEOSIDE DIPHOSPHATE REDUCTASE SMALL CHAIN [Encephalitozoon
           cuniculi GB-M1]
          Length = 325

 Score =  203 bits (516), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 49/179 (27%), Positives = 81/179 (45%), Gaps = 18/179 (10%)

Query: 19  VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
            + + +L+ + +   LLP+KY   W+ Y  A ++ W   EV +  D+  W     L   E
Sbjct: 5   EETELLLDPKEERFVLLPIKYHDIWKMYKKAESSFWTVEEVSLDKDIDDW---GKLNAKE 61

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           R  I   L FFA+S+ +V  N+V      +   E R +   Q   E +HS  +  +I + 
Sbjct: 62  RHFISYVLAFFAASDGIVNLNLVERFSTEVKVLEARFFYGFQMAIENIHSEMYSLLIDTY 121

Query: 139 GLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             D  E   LF+  R +PS+  KA+WA+++ +             + S   TR + F C
Sbjct: 122 IRDNDEKNFLFDAIRTIPSVKEKADWAIRWIE------------DKNSDFATRLVAFAC 168


>gi|118383611|ref|XP_001024960.1| ribonucleoside-diphosphate reductase, beta subunit family protein
           [Tetrahymena thermophila]
 gi|89306727|gb|EAS04715.1| ribonucleoside-diphosphate reductase, beta subunit family protein
           [Tetrahymena thermophila SB210]
          Length = 376

 Score =  202 bits (515), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 55/202 (27%), Positives = 85/202 (42%), Gaps = 27/202 (13%)

Query: 4   NTGLSPI--------QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWM 55
            TG++P+        +    +   +D+ +L    +   L P+KY   WE Y     + W 
Sbjct: 32  ATGMNPLPLLKSKNDEGKAPKEGYEDEPLLKDNPNRFVLFPIKYNKVWEMYKKELASFWT 91

Query: 56  PTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQ 115
             E+ +  DL  W+    LTD+ER  IK  L FFA+S+ +V  N+       +  PE R 
Sbjct: 92  ADEIDLYQDLKDWE---RLTDNERHFIKYVLAFFAASDGIVLENLAEQFMCEVQIPEARA 148

Query: 116 YLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSP 172
           +   Q   E +HS T+  +I +   DE E   LF   + VP I  KA WAL++       
Sbjct: 149 FYGFQIAMENIHSETYSLLIDTYIKDEVEKDYLFKASQNVPVIHKKAQWALKWIN----- 203

Query: 173 SFHYWNKRRRSRILTRSLRFLC 194
                         +R + F  
Sbjct: 204 --------NNDNFASRLIAFAA 217


>gi|156847978|ref|XP_001646872.1| hypothetical protein Kpol_2002p85 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117553|gb|EDO19014.1| hypothetical protein Kpol_2002p85 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 400

 Score =  202 bits (515), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 9/186 (4%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           +Q  E +    ++ +L A  +   L P++Y   +E Y  A  + W   E+ +  DL  W 
Sbjct: 63  VQRHELKEKETEEPLLVADPNRKILFPIQYPDIYEAYKRAEASFWTAEEIDLSKDLHDWN 122

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
             N + ++ER  I R L FFA+S+ +V  N+           E + +   Q   E +HS 
Sbjct: 123 --NRMNENERFFISRVLAFFAASDGIVNENLTENFSVEAQILEAKCFYGFQIMIENIHSE 180

Query: 130 TFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRIL 186
           T+  +I +   D  E   LFN    +P I  KA WAL++     + S   + +R  +   
Sbjct: 181 TYSLLIDTYIKDPKESQYLFNAIETIPQIKEKAEWALRWI----NDSEALFAERLVAFAA 236

Query: 187 TRSLRF 192
              + F
Sbjct: 237 IEGVFF 242


>gi|290977320|ref|XP_002671386.1| predicted protein [Naegleria gruberi]
 gi|284084954|gb|EFC38642.1| predicted protein [Naegleria gruberi]
          Length = 338

 Score =  202 bits (515), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 50/177 (28%), Positives = 76/177 (42%), Gaps = 19/177 (10%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L        L PL+Y   WE Y  A  + W   EV +  D+  W     LT +E+ 
Sbjct: 18  EEALLKENPHRFVLFPLEYPKIWEMYKKAMASFWTAEEVDLHTDITQW---TTLTPNEQH 74

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            IK  L FFA+S+ +V  N+       +  PE R +   Q   E +H+  +  +I +L  
Sbjct: 75  FIKSVLAFFAASDGIVNENLCQQFMAEVQIPEARCFYGFQIAIENIHAEMYSTLIETLIK 134

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           D+ E   LFN    VPS+  KA WA+++                 +    R L F C
Sbjct: 135 DQRERHRLFNAIDTVPSVQKKARWAMKWIN-------------NENLFAERLLAFAC 178


>gi|261335316|emb|CBH18310.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei gambiense DAL972]
          Length = 337

 Score =  202 bits (515), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 48/183 (26%), Positives = 82/183 (44%), Gaps = 19/183 (10%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           ++    ++ +L    D   + P+KY   W+KY  A ++ W    + + +D+  W+    L
Sbjct: 10  RKEGEVEEPLLTENPDRYVIFPIKYPDIWQKYKKAESSIWTVENIYLGNDMTDWEK---L 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            D ER  IK  L FFA+S+ +V  N+       +  PE R +   Q   E +HS T+  +
Sbjct: 67  DDGERHFIKHVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHSETYSVL 126

Query: 135 ITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           I +  +D  E   L +  R +P I  KA WA+++  + +S               TR + 
Sbjct: 127 IDTYVVDPDEKQRLLHAIRTIPCIEKKAKWAIEWIGSQTS-------------FPTRLVA 173

Query: 192 FLC 194
           F  
Sbjct: 174 FAA 176


>gi|313213932|emb|CBY40745.1| unnamed protein product [Oikopleura dioica]
          Length = 418

 Score =  202 bits (515), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 47/183 (25%), Positives = 76/183 (41%), Gaps = 19/183 (10%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
              +   + +L   +    + P++Y   W  Y  A  + W   EV +  D+  WK    L
Sbjct: 87  ADFDPQLEPLLKENNQRFVIFPIQYHDIWRMYKKAVASFWTTEEVDLGRDMDDWKK---L 143

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
             +E+  IK  L FFA+S+ +V  N+V      +  PE R +   Q   E +HS  +  +
Sbjct: 144 KKEEQFFIKHVLAFFAASDGIVNENLVDRFMSEIQIPEARSFYGFQIMMENIHSEMYAKL 203

Query: 135 ITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           I +L  D  E   LFN    +P+I  KA+WAL++                 +    R + 
Sbjct: 204 IENLVHDTKEKMGLFNAIETMPAIKKKADWALKWIGA-------------DAPYSVRVIA 250

Query: 192 FLC 194
           F  
Sbjct: 251 FAA 253


>gi|322817571|gb|EFZ25271.1| ribonucleoside-diphosphate reductase small chain, putative
           [Trypanosoma cruzi]
          Length = 337

 Score =  202 bits (515), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 11/178 (6%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
              ++ +L    D   + P+KY   W+KY  A ++ W   E+ +  DLA W+    + + 
Sbjct: 13  QEQEEPLLRENPDRYVIFPIKYHDIWKKYKEAESSIWTVEEIDLSSDLADWEK---MNEG 69

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+  IK  L FFA+S+ +V  N+       +  PE R +   Q   E VHS T+  ++ +
Sbjct: 70  EKFFIKHVLAFFAASDGIVLENLAQRFMTEVQVPEVRCFYGFQIAIENVHSETYSVLLDT 129

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
              D  E   + +    +P I  KANWA+++ ++ SS     + +R  +      + F
Sbjct: 130 YITDTEEKDRMLHAISTIPCIQKKANWAIRWIRSSSS-----FAERLVAFAAVEGIFF 182


>gi|256081213|ref|XP_002576867.1| ribonucleoside-diphosphate reductase small chain [Schistosoma
           mansoni]
 gi|238662153|emb|CAZ33104.1| ribonucleoside-diphosphate reductase small chain, putative
           [Schistosoma mansoni]
          Length = 365

 Score =  202 bits (515), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 45/182 (24%), Positives = 72/182 (39%), Gaps = 18/182 (9%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           +  ++ + +L        L P++Y   W  Y  A  + W   EV +  D   W+S   L 
Sbjct: 37  KSEIELEPLLKPNPHRFVLFPIEYHDVWHFYKKAVASFWTVEEVDLSKDFIHWES---LK 93

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
             ER  I   L FFA+S+ +V  N++    + +  PE R +   Q   E +HS  +  +I
Sbjct: 94  VGERHFISYVLAFFAASDGIVLENLLERFSQEVQIPEVRCFYGMQIAIENIHSEMYSLLI 153

Query: 136 TSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
            +   D  E   LFN    +  +  KA WAL +                +S    R + F
Sbjct: 154 DTYIKDSKERDFLFNAISNLTCVAKKAQWALDWIG------------DSKSTFAERLVAF 201

Query: 193 LC 194
             
Sbjct: 202 AA 203


>gi|330443801|ref|YP_004376787.1| ribonucleoside-diphosphate reductase subunit beta [Chlamydophila
           pecorum E58]
 gi|328806911|gb|AEB41084.1| ribonucleoside-diphosphate reductase, beta subunit [Chlamydophila
           pecorum E58]
          Length = 346

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 94/180 (52%), Positives = 130/180 (72%), Gaps = 2/180 (1%)

Query: 15  KRVNVDDKRMLNA-RSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           KRV++++KR++N  + DVNQL+P+KY WAWE YL+ C N+W+PTE+ M  D+ LWKS NG
Sbjct: 11  KRVHINNKRLVNCSQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEISMARDIELWKS-NG 69

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           L++DER +I  NLGFF+++ESLV NNIVLAI++H++NPE RQYLLRQAFEEAVH+ TF Y
Sbjct: 70  LSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHITNPEARQYLLRQAFEEAVHTQTFLY 129

Query: 134 IITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           I  SL LDE E+FN Y E  SI AK ++ +  T  +  P+F   +     + +   + + 
Sbjct: 130 ICESLSLDEAEVFNAYNERESIKAKDDFQMTLTVDVLDPNFSTDSIEGLRKFIKNLVGYY 189


>gi|38229183|ref|NP_938276.1| 20L [Yaba monkey tumor virus]
 gi|38000454|gb|AAR07377.1| 20L [Yaba monkey tumor virus]
          Length = 325

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 10/179 (5%)

Query: 17  VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           ++V  + +L   +    + P+ Y   W  Y  A  + W   EV +  D   W     L++
Sbjct: 1   MDVVSEPILRQTTGRYVVFPIVYKDIWMMYKKAVASFWTVEEVDLSKDFPDW---LKLSE 57

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
           +E+  IK  L FFA+S+ +V  N+    Y  +   E R +   Q   E +HS  +  +I 
Sbjct: 58  NEKKFIKHILAFFAASDGIVNENLAERFYSEVQVSEARCFYGFQIAMENIHSEMYSLLID 117

Query: 137 SLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           +  LD  E   LFN    +  +  KANWA ++ ++ +S     + +R  +      + F
Sbjct: 118 TYILDSKEKNYLFNAIENMNCVKQKANWARKWIESKNS----TYGERLIAFAAVEGIFF 172


>gi|12085003|ref|NP_073405.1| 20L protein [Yaba-like disease virus]
 gi|56404692|sp|Q9DHU2|RIR2_YLDV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|12056179|emb|CAC21258.1| 20L protein [Yaba-like disease virus]
          Length = 325

 Score =  202 bits (514), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 10/179 (5%)

Query: 17  VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           +N   + +L    +   + P+ Y   W+ Y  A  + W   EV +  D + W     L+D
Sbjct: 1   MNTSCEPILKPTLNKYVVFPIVYEDIWKMYKKAVASFWTVEEVDLSKDFSDW---LKLSD 57

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
           +E+  IK  L FFA+S+ +V  N+    Y  +   E R +   Q   E +HS  +  +I 
Sbjct: 58  NEKNFIKHILAFFAASDGIVNENLAERFYSEVQISEARCFYGFQIAMENIHSEMYSLLID 117

Query: 137 SLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           +  LD  E   LFN    +  +  KANWA ++ ++ +      + +R  +      + F
Sbjct: 118 TYILDSKEKNYLFNAIENMNCVKQKANWAKKWIESKN----RTYGERLVAFAAVEGIFF 172


>gi|154340038|ref|XP_001565976.1| ribonucleoside-diphosphate reductase small chain [Leishmania
           braziliensis MHOM/BR/75/M2904]
 gi|134063294|emb|CAM45500.1| putative ribonucleoside-diphosphate reductase small chain
           [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 388

 Score =  202 bits (514), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 47/203 (23%), Positives = 83/203 (40%), Gaps = 20/203 (9%)

Query: 2   ANNTGLSPIQAGEKRV---------NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNN 52
             +  + PI  G + +         N +++ +         L P++Y   W KY    + 
Sbjct: 39  TEDLVIKPIATGAEVLLADKVAEGTNAEEEPLQQENPFRYVLFPIQYHDIWRKYKEQESC 98

Query: 53  HWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPE 112
            W   E+ + +D+  W     L D ER  IK  L FFA S+ +V  N+       +  PE
Sbjct: 99  IWTVEEIDLGNDMKDW---VALNDGERHFIKHVLAFFAGSDGIVVENLAQRFMSDVKVPE 155

Query: 113 CRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTL 169
            R +   Q   E +HS T+  ++ +   D  E   L +  + +P I  KA WA+++  + 
Sbjct: 156 ARAFYGFQLMMENIHSETYSVLLDTYITDSEEKLRLLHAIQTIPCIQKKAEWAVRWIGSS 215

Query: 170 SSPSFHYWNKRRRSRILTRSLRF 192
           +S     + +R         + F
Sbjct: 216 AS-----FQERLIGFAAVEGIFF 233


>gi|22788780|ref|NP_690492.1| Rr2 [Heliothis zea virus 1]
 gi|22671540|gb|AAN04367.1|AF451898_72 Rr2 [Heliothis zea virus 1]
          Length = 333

 Score =  201 bits (513), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 50/176 (28%), Positives = 74/176 (42%), Gaps = 17/176 (9%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           +  L   S    L P++Y   WE Y  A  + W   EV +  DL  W+++  LT+ ER  
Sbjct: 10  EFNLEEPSSRFTLFPIRYHDIWEMYKKAQASFWTVEEVDLSKDLYDWETR--LTETEREF 67

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           I   L FFA S+ +V +N++    + L+ PE   +   Q   E VHS  +  +I     D
Sbjct: 68  ISHILAFFAGSDGIVNDNLLTRFSQELTIPEVSCFYGFQIMIENVHSEMYSTLIDMYIRD 127

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
                 LFN    VPSI  KA W +++                +S    R + F  
Sbjct: 128 PQRKHMLFNAIDTVPSIRKKAQWVIRWID------------DDKSSYADRLVAFAA 171


>gi|71416121|ref|XP_810103.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma cruzi
           strain CL Brener]
 gi|70874586|gb|EAN88252.1| ribonucleoside-diphosphate reductase small chain, putative
           [Trypanosoma cruzi]
          Length = 337

 Score =  201 bits (513), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 11/178 (6%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
              ++ +L    D   + P+KY   W+KY  A ++ W   E+ +  DLA W+    + + 
Sbjct: 13  QEQEEPLLRENPDRYVIFPIKYHDIWKKYKEAESSIWTVEEIDLSSDLADWEK---MNEG 69

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+  IK  L FFA+S+ +V  N+       +  PE R +   Q   E VHS T+  ++ +
Sbjct: 70  EKFFIKHVLAFFAASDGIVLENLAQRFMTEVQVPEVRCFYGFQIAIENVHSETYSVLLDT 129

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
              D  E   + +    +P I  KANWA+++ ++ SS     + +R  +      + F
Sbjct: 130 YITDTEEKDRMLHAISTIPCIQKKANWAIRWIRSSSS-----FAERLVAFAAVEGIFF 182


>gi|157939640|ref|YP_001497012.1| ribonucleotide reductase [Tanapox virus]
 gi|146746356|gb|ABQ43492.1| ribonucleotide reductase [Tanapox virus]
 gi|146746512|gb|ABQ43647.1| ribonucleotide reductase [Tanapox virus]
          Length = 325

 Score =  201 bits (513), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 10/179 (5%)

Query: 17  VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           +N   + +L    +   + P+ Y   W+ Y  A  + W   EV +  D + W     L+D
Sbjct: 1   MNTPCEPILKPTLNKYVVFPIVYEDIWKMYKKAVASFWTVEEVDLSKDFSDW---LKLSD 57

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
           +E+  IK  L FFA+S+ +V  N+    Y  +   E R +   Q   E +HS  +  +I 
Sbjct: 58  NEKNFIKHILAFFAASDGIVNENLAERFYSEVQISEARCFYGFQIAMENIHSEMYSLLID 117

Query: 137 SLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           +  LD  E   LFN    +  +  KANWA ++ ++ +      + +R  +      + F
Sbjct: 118 TYILDSKEKNYLFNAIENMNCVKQKANWAKKWIESKN----RTYGERLVAFAAVEGIFF 172


>gi|313235850|emb|CBY19835.1| unnamed protein product [Oikopleura dioica]
          Length = 382

 Score =  201 bits (512), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 47/183 (25%), Positives = 76/183 (41%), Gaps = 19/183 (10%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
              +   + +L   +    + P++Y   W  Y  A  + W   EV +  D+  WK    L
Sbjct: 51  ADFDPQLEPLLKENNQRFVIFPIQYHDIWRMYKKAVASFWTTEEVDLGRDMDDWKK---L 107

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
             +E+  IK  L FFA+S+ +V  N+V      +  PE R +   Q   E +HS  +  +
Sbjct: 108 KKEEQFFIKHVLAFFAASDGIVNENLVDRFMSEIQIPEARSFYGFQIMMENIHSEMYAKL 167

Query: 135 ITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           I +L  D  E   LFN    +P+I  KA+WAL++                 +    R + 
Sbjct: 168 IENLVHDTKEKMGLFNAIETMPAIKKKADWALKWIGA-------------DAPYSVRVIA 214

Query: 192 FLC 194
           F  
Sbjct: 215 FAA 217


>gi|3914644|sp|O46310|RIR2_LEIAM RecName: Full=Ribonucleoside-diphosphate reductase small subunit;
           AltName: Full=Ribonucleotide reductase M2 subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|2828563|gb|AAC08302.1| ribonucleotide reductase M2 subunit [Leishmania amazonensis]
          Length = 345

 Score =  201 bits (511), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 45/195 (23%), Positives = 81/195 (41%), Gaps = 11/195 (5%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +A    + P     +  N +++ +         L P++Y   W KY    +  W   E+ 
Sbjct: 4   VAAGAEVLPADKVAQGTNAEEEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEID 63

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           + +D+  W +   L D ER  IK  L FFA S+ +V  N+       +  PE R +   Q
Sbjct: 64  LGNDMKDWAT---LNDGERHFIKHVLAFFAGSDGIVIENLAQRFMSDVKVPEARAFYGFQ 120

Query: 121 AFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYW 177
              E +HS T+  ++ +   D  E   L +  + +P I  KA W +++  + +S     +
Sbjct: 121 LMMENIHSETYSVLLDTYITDSEEKLRLLHAIQTIPCIQKKAEWPVRWIGSSAS-----F 175

Query: 178 NKRRRSRILTRSLRF 192
            +R         + F
Sbjct: 176 QQRLIGFAAVEGIFF 190


>gi|76163066|gb|AAX30834.2| SJCHGC08068 protein [Schistosoma japonicum]
          Length = 230

 Score =  201 bits (511), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 45/183 (24%), Positives = 72/183 (39%), Gaps = 18/183 (9%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
            +  ++ + +L        L P++Y   W  Y  A  + W   EV +  D   W+S   L
Sbjct: 33  SKDEIELEPLLKPNPHRFVLFPIEYHDIWHFYKKAVASFWTVEEVDLSKDFTHWES---L 89

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
              ER  I   L FFA+S+ +V  N++    + +  PE R +   Q   E +HS  +  +
Sbjct: 90  KVGERHFISYVLAFFAASDGIVLENLLERFSQEVQIPEVRCFYGMQIAIENIHSEMYSLL 149

Query: 135 ITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           I +   D  E   LFN    +  +  KA WAL +                +S    R + 
Sbjct: 150 IDTYIKDSKERDFLFNAISNLTCVAKKAQWALDWIG------------DSKSTFAERLVA 197

Query: 192 FLC 194
           F  
Sbjct: 198 FAA 200


>gi|324525159|gb|ADY48515.1| Ribonucleoside-diphosphate reductase small chain [Ascaris suum]
          Length = 240

 Score =  201 bits (511), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 49/178 (27%), Positives = 74/178 (41%), Gaps = 18/178 (10%)

Query: 20  DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER 79
            D+ +L        + P+KY   W  Y +A  + W   E+ +  D A W+    LTD ER
Sbjct: 9   SDEPLLAENPSRFVIFPIKYHDIWAFYKNAVASFWTADEIDLSRDYADWEK---LTDGER 65

Query: 80  LMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
             I R L FFA+S+ +V  N+       +  PE R +   Q   E VHS  +  +I +  
Sbjct: 66  FFISRVLSFFAASDGIVNENLTGRFSTEVQVPEARFFYGFQIMMEGVHSEMYSKMIEAYI 125

Query: 140 LDEGEL---FNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            D  E    F+   +   I  KA+WAL++    +SP               R + F  
Sbjct: 126 KDPKEQMVHFDAIHQFECIKKKADWALRWIDDRNSP------------FPVRLIAFAA 171


>gi|91215505|ref|ZP_01252476.1| probable ribonucleoside-diphosphate reductase small chain
           [Psychroflexus torquis ATCC 700755]
 gi|91186457|gb|EAS72829.1| probable ribonucleoside-diphosphate reductase small chain
           [Psychroflexus torquis ATCC 700755]
          Length = 326

 Score =  201 bits (511), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 19/176 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    +   L P+ +   WE Y     + W   E+ +Q D+  WK+K  L+ DE+  
Sbjct: 5   EPILEENKNRFVLFPITHPDIWEWYKKCEASFWTAEEIDLQQDITDWKTK--LSKDEQYF 62

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+       +   E + +   Q   E +HS T+  +I +   D
Sbjct: 63  IKHILAFFAASDGIVNENLAENFVNEVQYTEAKFFYGFQIMVENIHSETYSLLIDTYVDD 122

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + E   LF      P+I  KA+WALQ+ ++                   R + F  
Sbjct: 123 DKEKDLLFKAIENFPAIKKKADWALQWIES--------------DSFAERLIAFAA 164


>gi|324509007|gb|ADY43795.1| Ribonucleoside-diphosphate reductase small chain [Ascaris suum]
          Length = 337

 Score =  200 bits (510), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 49/178 (27%), Positives = 74/178 (41%), Gaps = 18/178 (10%)

Query: 20  DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER 79
            D+ +L        + P+KY   W  Y +A  + W   E+ +  D A W+    LTD ER
Sbjct: 16  SDEPLLAENPSRFVIFPIKYHDIWAFYKNAVASFWTADEIDLSRDYADWEK---LTDGER 72

Query: 80  LMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
             I R L FFA+S+ +V  N+       +  PE R +   Q   E VHS  +  +I +  
Sbjct: 73  FFISRVLSFFAASDGIVNENLTGRFSTEVQVPEARFFYGFQIMMEGVHSEMYSKMIEAYI 132

Query: 140 LDEGEL---FNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            D  E    F+   +   I  KA+WAL++    +SP               R + F  
Sbjct: 133 KDPKEQMVHFDAIHQFECIKKKADWALRWIDDRNSP------------FPVRLIAFAA 178


>gi|189219089|ref|YP_001939730.1| ribonucleotide-diphosphate reductase subunit beta
           [Methylacidiphilum infernorum V4]
 gi|189185947|gb|ACD83132.1| Ribonucleotide reductase, beta subunit [Methylacidiphilum
           infernorum V4]
          Length = 361

 Score =  200 bits (509), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 99/181 (54%), Positives = 135/181 (74%), Gaps = 2/181 (1%)

Query: 14  EKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
           +KR+NV++KR++N ++ DVNQL+PLKY WAWE YL+ C N+W+P+EVPMQ D+ LWKS N
Sbjct: 25  KKRINVEEKRLINCKAVDVNQLMPLKYKWAWEHYLNGCANNWLPSEVPMQRDVELWKS-N 83

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
            L++DERL+I RNLGFFA+ ESLV NNIVLAI++ ++N E RQYLLRQA+EEAVH+H F 
Sbjct: 84  RLSNDERLVIMRNLGFFATGESLVGNNIVLAIFKFVTNAEARQYLLRQAYEEAVHTHAFL 143

Query: 133 YIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           YI+ SLGLDE E+FNMY EV SI+ K  + +  T+ +    F+  +     + +   + F
Sbjct: 144 YIVESLGLDEREVFNMYHEVNSISNKDQFEMTLTEDILREGFNTESVENIQKFVKNLVGF 203

Query: 193 L 193
            
Sbjct: 204 Y 204


>gi|71648907|ref|XP_813233.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma cruzi
           strain CL Brener]
 gi|70878098|gb|EAN91382.1| ribonucleoside-diphosphate reductase small chain, putative
           [Trypanosoma cruzi]
          Length = 337

 Score =  200 bits (509), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 11/179 (6%)

Query: 17  VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           +   ++ +L    D   + P+KY   W+KY  + ++ W   E+ +  DLA W+    + +
Sbjct: 12  LQEQEEPLLRENPDRYVIFPIKYHDIWKKYKESESSIWTVEEIDLSSDLADWEK---MNE 68

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
            E+  IK  L FFA+S+ +V  N+       +  PE R +   Q   E VHS T+  ++ 
Sbjct: 69  GEKFFIKHVLAFFAASDGIVLENLAQRFMTEVQVPEVRCFYGFQIAIENVHSETYSVLLD 128

Query: 137 SLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           +   D  E   + +    +P I  KANWA+++ ++ SS     + +R  +      + F
Sbjct: 129 TYITDTEEKDRMLHAISTIPCIQKKANWAIRWIRSSSS-----FAERLVAFAAVEGIFF 182


>gi|156839886|ref|XP_001643629.1| hypothetical protein Kpol_478p6 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114248|gb|EDO15771.1| hypothetical protein Kpol_478p6 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 394

 Score =  200 bits (509), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 5/165 (3%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           +Q  + +    ++ +LN   +   + P++Y   +E Y  A  + W   E+ +  DL+ W 
Sbjct: 57  VQRHKLKEMEKNEPLLNEDKNRLIMHPIRYPDIYEAYKKAEASFWTAEEIDLSKDLSDWN 116

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
            K  L  +ER  I R L FFA+S+ +V  N+       +  PE R +   Q   E +HS 
Sbjct: 117 DK--LNSNERFFISRVLAFFAASDGIVNENLTENFSVEVKVPEARCFYGFQIMIENIHSE 174

Query: 130 TFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           T+  +I +   D  E   LFN    +P I  KA WAL++     +
Sbjct: 175 TYSLLIDTYIKDPKESDFLFNAIDYIPQIKEKAEWALRWINNDEA 219


>gi|226528734|ref|NP_001150842.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
 gi|195642302|gb|ACG40619.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
          Length = 339

 Score =  200 bits (509), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 51/196 (26%), Positives = 77/196 (39%), Gaps = 26/196 (13%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           A  T L P  A E         +L   SD   + P+++   WE Y  A  + W   EV +
Sbjct: 3   AAPTLLPPCDAEEP--------LLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVGL 54

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D   W     L+ DER  I   L FFA+S+ +V  N+       +   E R +   Q 
Sbjct: 55  SADARHWDE--ALSPDERHFISHVLAFFAASDGIVLENLASRFMTDVQVAEARAFYGFQI 112

Query: 122 FEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWN 178
             E +HS  +  ++ +   D  E   LF     VP++  KA+WA+++             
Sbjct: 113 AIENIHSEMYSLLLETYIRDHVEKDRLFRAIDTVPAVRRKADWAMRWIDGGE-------- 164

Query: 179 KRRRSRILTRSLRFLC 194
                R   R + F C
Sbjct: 165 -----RFAERIVAFAC 175


>gi|225320685|dbj|BAH29738.1| ribonucleoside-diphosphate reductase subunit M2 [Dicyema japonicum]
          Length = 337

 Score =  200 bits (508), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 85/186 (45%), Gaps = 10/186 (5%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           + + ++  + D + +L +      L P++Y   +  Y  A  + W   EV +  D+  W 
Sbjct: 3   LPSEQEEFSDDQEPLLVSNPRRFVLFPIEYPDIFTMYKQALASIWTVEEVDLSKDIKHW- 61

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
             N L  DE+  I   L FFA+S+ +V  N+V      +   E R +   Q   E +HS 
Sbjct: 62  --NILNSDEKRFISHVLAFFAASDGIVNENLVQRFSVEVQVSEARSFYGLQIAVENIHSE 119

Query: 130 TFQYIITSLGLD---EGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRIL 186
            +  +I +   D   + ++F+    +P +  KA+WA+++ ++  S    ++++R  +   
Sbjct: 120 MYSLLIDTYISDFQEKDKMFSAIETMPFVKKKADWAIRWIESTES----HFSERLVAFAA 175

Query: 187 TRSLRF 192
              + F
Sbjct: 176 VEGIFF 181


>gi|148700272|gb|EDL32219.1| mCG1034315 [Mus musculus]
          Length = 213

 Score =  200 bits (508), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 6/153 (3%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
           +  E  V  +++ +L   S    + P++Y   W  Y  A  + W   EV +  +L  W  
Sbjct: 64  ETEENVVRSNEEPLLRKSSRRFVIFPIQYPDIWRMYKQARASFWTGEEVDLSKNLPHW-- 121

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            N L  DE+  I   L FFA+S+ +V  N+V    + +  PE   +   Q   E VHS  
Sbjct: 122 -NKLKSDEKYFISHILAFFAASDGIVNENLVERFSQEVQVPETHCFYGFQILIENVHSEM 180

Query: 131 FQYIITSLGLDEGE---LFNMYREVPSITAKAN 160
           +  +I +   D  +   LFN    +P +  KA+
Sbjct: 181 YSLLIDTYIRDPKKREFLFNAIETMPYVKKKAD 213


>gi|312130971|ref|YP_003998311.1| ribonucleoside-diphosphate reductase [Leadbetterella byssophila DSM
           17132]
 gi|311907517|gb|ADQ17958.1| Ribonucleoside-diphosphate reductase [Leadbetterella byssophila DSM
           17132]
          Length = 328

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 40/176 (22%), Positives = 73/176 (41%), Gaps = 20/176 (11%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L        + P+K+   WE Y  A  + W   E+ +  D   W S   L D ER  
Sbjct: 10  EPLLMDDPTRFVIFPIKHNDIWEFYKKAEASFWTAEELDLSQDHKDWAS---LNDGERHF 66

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           I   L FFA+S+ +V  N+ +    ++   E + +   Q   E +H+ T+  +I +   D
Sbjct: 67  ISHVLAFFAASDGIVNENLAVGFLSNVQYAEAKCFYGFQIMIENIHAETYSLLIDTYIKD 126

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             E   + N    +P +  KA+WA+++ +              +   + R + F  
Sbjct: 127 TTERQRMLNAIETIPCVKKKADWAIRWIE--------------QGTFIERLIAFAA 168


>gi|226294144|gb|EEH49564.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides
           brasiliensis Pb18]
          Length = 325

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 44/156 (28%), Positives = 68/156 (43%), Gaps = 17/156 (10%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            W+ Y  A  + W   EV +  DL  W   N L DDER  I   L FFA+S+ +V  N+V
Sbjct: 11  IWQMYKKAEASFWTAEEVDLSKDLHDWN--NRLNDDERYFISHVLAFFAASDGIVNENLV 68

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAK 158
                 +  PE R +   Q   E +HS T+  +I +   +  +   LF+    +P I  K
Sbjct: 69  ERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEPKQRTYLFDAIDTIPCIRKK 128

Query: 159 ANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           A+WA+++ +             + S    R + F  
Sbjct: 129 ADWAIRWIE------------DKESTFAQRLVAFAA 152


>gi|89890041|ref|ZP_01201552.1| ribonucleoside-diphosphate reductase small chain [Flavobacteria
           bacterium BBFL7]
 gi|89518314|gb|EAS20970.1| ribonucleoside-diphosphate reductase small chain [Flavobacteria
           bacterium BBFL7]
          Length = 330

 Score =  199 bits (507), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 45/181 (24%), Positives = 76/181 (41%), Gaps = 19/181 (10%)

Query: 17  VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           +    + +L    D   + P+++   WE Y       W   E+ +Q D+  W+  N L  
Sbjct: 1   MQTTQEPILQENPDRFVIFPIQHDDLWEWYKKQQACIWTAEEIDLQVDITDWQ--NSLNS 58

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
           DER  IK  L FFA+S+ +V  N+       +   E + +   Q   E +HS T+  +I 
Sbjct: 59  DERYFIKHILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLID 118

Query: 137 SLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           +   D+ E   LF      P+I  KA+WA+++ ++ S                 R + F 
Sbjct: 119 TYVKDDAEKDQLFRAIENFPAIKLKADWAMKWIESPS--------------FAERLIAFA 164

Query: 194 C 194
            
Sbjct: 165 A 165


>gi|295670491|ref|XP_002795793.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides
           brasiliensis Pb01]
 gi|226284878|gb|EEH40444.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides
           brasiliensis Pb01]
          Length = 325

 Score =  199 bits (507), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 17/156 (10%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            W+ Y  A  + W   E+ +  DL  W   N L DDER  I   L FFA+S+ +V  N+V
Sbjct: 11  IWQMYKKAEASFWTAEEIDLSKDLHDWN--NRLNDDERYFISHVLAFFAASDGIVNENLV 68

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAK 158
                 +  PE R +   Q   E +HS T+  +I +   +  +   LF+    +P I  K
Sbjct: 69  ERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEPKQRTYLFDAIDTIPCIRKK 128

Query: 159 ANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           A+WA+++ +             + S    R + F  
Sbjct: 129 ADWAIRWIE------------DKESTFAQRLVAFAA 152


>gi|213402763|ref|XP_002172154.1| ribonucleoside-diphosphate reductase small chain
           [Schizosaccharomyces japonicus yFS275]
 gi|212000201|gb|EEB05861.1| ribonucleoside-diphosphate reductase small chain
           [Schizosaccharomyces japonicus yFS275]
          Length = 392

 Score =  199 bits (506), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 6/167 (3%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           SP   G+K  +  D+ +L        + P++Y   W+ Y  A  + W   E+ +  DL  
Sbjct: 55  SPYYLGKKE-DEKDEVVLTPNPRRFVMFPIEYHDIWQFYKKAEASFWTAEEIDLSKDLHD 113

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           W +K  L  DER  I   L +FA+S+ +V  N++      +   E R     Q   E +H
Sbjct: 114 WDNK--LNKDERYFISTVLAYFAASDGIVNENLLSRFSSEVQIAEARCVYGFQIMIENIH 171

Query: 128 SHTFQYIITSLGLDEGEL---FNMYREVPSITAKANWALQYTQTLSS 171
           S T+  ++ +   D  E    F+    + SI AKA WAL++ +   S
Sbjct: 172 SETYSLLLDTYIRDPYEKQRHFDAILTMGSIKAKAKWALRWIEDPES 218


>gi|303389600|ref|XP_003073032.1| ribonucleoside-diphosphate reductase small subunit [Encephalitozoon
           intestinalis ATCC 50506]
 gi|303302176|gb|ADM11672.1| ribonucleoside-diphosphate reductase small subunit [Encephalitozoon
           intestinalis ATCC 50506]
          Length = 326

 Score =  199 bits (506), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 18/176 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L+ + +   L P+++   W  Y  A ++ W   EV +  D+  WK    L   E+  
Sbjct: 8   EPLLDPKEERFVLFPIQHEDVWRMYKKAESSFWTVEEVLLDKDIEDWKK---LNPKEKHF 64

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           I   L FFA+S+ +V  N+V      +   E + +   Q   E +HS  +  +I +   D
Sbjct: 65  ISNVLAFFAASDGIVNLNLVERFSSEVKMLEAKLFYGFQIAIENIHSEMYSLLIDTYVRD 124

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             +   LFN  + +PS+  KA+WA+++ +             + S   TR + F C
Sbjct: 125 GEQKKFLFNAVKTIPSVKDKADWAIKWIE------------DKNSDFATRLVAFAC 168


>gi|307104534|gb|EFN52787.1| hypothetical protein CHLNCDRAFT_10712 [Chlorella variabilis]
          Length = 214

 Score =  198 bits (504), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 19/177 (10%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
            + +L A ++   LLP+KY   +E Y  A  ++W   EV +  D+  W+    LTDDER 
Sbjct: 1   KEPILQANNERFCLLPVKYDRCFEYYKQAQASYWTAEEVDLSQDMRDWRK---LTDDERH 57

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            +   L FFA+S+ +V  N+     + +  PE R +   Q+  EAVHS  +  ++     
Sbjct: 58  FVSYVLAFFAASDGIVLENLSTRFMQEVQIPEARAFYAFQSAIEAVHSEMYGLLLEQYIR 117

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           D  E   LF+    +P +  KA WA+++ ++ S                 R + + C
Sbjct: 118 DPDERDLLFHAVDTIPCVQKKAQWAMKWIESSSC-------------FAERLVAYAC 161


>gi|297621807|ref|YP_003709944.1| ribonucleoside-diphosphate reductase beta subunit [Waddlia
           chondrophila WSU 86-1044]
 gi|297377108|gb|ADI38938.1| ribonucleoside-diphosphate reductase beta subunit [Waddlia
           chondrophila WSU 86-1044]
          Length = 344

 Score =  198 bits (504), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 98/181 (54%), Positives = 130/181 (71%), Gaps = 4/181 (2%)

Query: 14  EKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
             R   D K+++N    DVNQLLPLKY WAWE YL+ C NHWMP+EVPM  D+  WKS +
Sbjct: 9   TGRFRSDQKKLINCSEVDVNQLLPLKYKWAWEHYLNGCANHWMPSEVPMTKDIETWKS-D 67

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
            +++DERL+IKRNLGFFA++ESLVANN+VLAI++H++N ECRQYLLRQAFEEA+HSH F 
Sbjct: 68  SISEDERLLIKRNLGFFATAESLVANNLVLAIFKHVTNAECRQYLLRQAFEEALHSHAFL 127

Query: 133 YIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           YI+ SLGL+E E+FNMYRE+ +I+ K  + +Q T+ L            + + L   + +
Sbjct: 128 YIVDSLGLEEQEIFNMYREISTISEKDEFEMQLTKGLIDG--ETKTLAGKQQFLKNLVGY 185

Query: 193 L 193
            
Sbjct: 186 Y 186


>gi|40556174|ref|NP_955259.1| CNPV236 ribonucleotide reductase small subunit [Canarypox virus]
 gi|40233999|gb|AAR83582.1| CNPV236 ribonucleotide reductase small subunit [Canarypox virus]
          Length = 323

 Score =  198 bits (503), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 6/153 (3%)

Query: 19  VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
           +  + +L    D   + P+++G  W  Y  A  + W   EV +  DL  WK+   L  +E
Sbjct: 1   MSSEPLLVNNPDRFVIFPIQHGDIWRMYKQAVASFWTVEEVDLSYDLIDWKN---LKPEE 57

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           R  I   L FFA S+ +V  N+V    + +  PE R +   Q   E +HS  +  +I + 
Sbjct: 58  RRFISYILAFFAVSDGIVNENLVEKFCQEVQIPEARCFYGFQIAIENIHSEMYSLLIDTY 117

Query: 139 GLDEGE---LFNMYREVPSITAKANWALQYTQT 168
             D  E   LF+  R +  +  K+ WAL++   
Sbjct: 118 IDDNNEKKRLFSSMRTMDCVRKKSEWALKWIND 150


>gi|149392653|gb|ABR26129.1| ribonucleoside-diphosphate reductase small chain [Oryza sativa
           Indica Group]
          Length = 233

 Score =  198 bits (503), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 42/164 (25%), Positives = 68/164 (41%), Gaps = 18/164 (10%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P++Y   WE Y  A  + W   EV +  D   W     L+ DER  +   L FFA+S+
Sbjct: 1   MFPIRYPQIWEFYKKAVASFWTAEEVDLSADARHWD--AALSPDERHFVSHVLAFFAASD 58

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYR 150
            +V  N+       +   E R +   Q   E +HS  +  ++ +   D+ E   LF    
Sbjct: 59  GIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIRDDVEKDRLFRAID 118

Query: 151 EVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            VP++  KA+WA+++                  R   R + F C
Sbjct: 119 TVPAVRRKADWAMRWIDGGE-------------RFAERLVAFAC 149


>gi|74025554|ref|XP_829343.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
 gi|70834729|gb|EAN80231.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
           brucei]
          Length = 337

 Score =  198 bits (503), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 19/183 (10%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           ++    ++ +L    D   + P+KY   W+KY  A +N W    + + +D+  W+    L
Sbjct: 10  RKEGEVEEPLLTENPDRYVIFPIKYPDIWQKYKKARSNFWAMENIYLGNDMTDWEK---L 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            D ER  IK  L FFA+ + +V  N V      +  PE R +   Q   E +HS T+  +
Sbjct: 67  DDGERHFIKHVLAFFAARDGIVLENFVQRFMCEVQVPEVRCFYGFQIAMENIHSETYSVL 126

Query: 135 ITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           I +  +D  E   L +  R +P I  KA WA+++  + +S               TR + 
Sbjct: 127 IDTYVVDPDEKQRLLHAIRTIPCIEKKAKWAIEWIGSQTS-------------FPTRLVA 173

Query: 192 FLC 194
           F  
Sbjct: 174 FAA 176


>gi|211956300|ref|YP_002302368.1| ribonucleotide reductase small subunit [Deerpox virus W-1170-84]
 gi|115503095|gb|ABI99013.1| ribonucleotide reductase small subunit [Deerpox virus W-1170-84]
          Length = 321

 Score =  197 bits (502), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 45/176 (25%), Positives = 70/176 (39%), Gaps = 18/176 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L   ++   + P+ Y   W  Y  A  + W   EV +  DL  WK    LTD+ER  
Sbjct: 2   EPLLVESNNRFVIFPIVYNDIWIMYKKAVASFWTTEEVDLSKDLLDWKK---LTDNERYF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+    Y  +   E R +   Q   E +HS  +  +I +   D
Sbjct: 59  IKNILAFFAASDGIVNENLAQRFYSEVQCSEARCFYGFQIAIENIHSEMYSLLIDTYITD 118

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             E   L      +  +  KA WA ++               + S    R + F  
Sbjct: 119 VDEKNHLLKAIDTIDCVKEKAKWAEKWI------------LDKESSYGERLVAFAA 162


>gi|62637405|ref|YP_227403.1| Ribonucleotide reductase small subunit [Deerpox virus W-848-83]
 gi|115503265|gb|ABI99183.1| ribonucleotide reductase small subunit [Deerpox virus W-848-83]
          Length = 321

 Score =  197 bits (502), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 46/174 (26%), Positives = 72/174 (41%), Gaps = 10/174 (5%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L   ++   + P+ Y   W  Y  A  + W   EV +  DL  WK    LTD+ER  
Sbjct: 2   EPLLVESNNRFVIFPIIYNDIWIMYKKAIASFWTTEEVDLSKDLLDWKK---LTDNERYF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+    Y  +   E R +   Q   E +HS  +  +I +   D
Sbjct: 59  IKNILAFFAASDGIVNENLAQRFYSEVQCSEARCFYGFQIAIENIHSEMYSLLIDTYITD 118

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             E   L      +  I  KA WA ++     S     + +R  +      + F
Sbjct: 119 VDEKNHLLKAIDTIDCIKEKAKWAEKWILDKES----TYGERLVAFAAVEGIFF 168


>gi|323304329|gb|EGA58102.1| Rnr2p [Saccharomyces cerevisiae FostersB]
          Length = 229

 Score =  197 bits (502), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 5/154 (3%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +LN   +   L P+KY   W+ Y  A  + W   E+ +  D+  W   N + ++ER 
Sbjct: 75  EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWN--NRMNENERF 132

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I R L FFA+S+ +V  N+V      +  PE + +   Q   E +HS T+  +I +   
Sbjct: 133 FISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIK 192

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           D  E   LFN    +P I  KA WAL++ Q   +
Sbjct: 193 DPKESEFLFNAIHTIPEIGEKAEWALRWIQDADA 226


>gi|68485781|ref|XP_713171.1| hypothetical protein CaO19.9424 [Candida albicans SC5314]
 gi|68485874|ref|XP_713125.1| hypothetical protein CaO19.1868 [Candida albicans SC5314]
 gi|46434604|gb|EAK94008.1| hypothetical protein CaO19.1868 [Candida albicans SC5314]
 gi|46434651|gb|EAK94054.1| hypothetical protein CaO19.9424 [Candida albicans SC5314]
 gi|238883648|gb|EEQ47286.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
           albicans WO-1]
          Length = 394

 Score =  196 bits (498), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 17/182 (9%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           +    ++ +L      + + P+KY   W+ Y  +  + W   E+ +  DL  W +K  + 
Sbjct: 65  KQEESNEPLLTPDKTRHTIYPIKYPELWQFYKKSLASFWTAEELDLSKDLDDWNNK--MN 122

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           ++ER  I R L FFA+S+ +V  N+V      +  PE +     Q   E +HS T+  +I
Sbjct: 123 ENERFFISRVLAFFAASDGIVNENLVENFCAEVQIPEAKSVYKFQIMMENIHSETYSLLI 182

Query: 136 TSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
            +   D  E   LFN    +P I  KA+WA+++ Q+              +    R + F
Sbjct: 183 ETYFKDPEEADFLFNAIDNIPFIRKKADWAIRWIQS------------EDALYAERLVAF 230

Query: 193 LC 194
             
Sbjct: 231 AA 232


>gi|6525234|gb|AAF15363.1|AF205376_1 ribonucleotide reductase R2 subunit [Plasmodium falciparum]
          Length = 320

 Score =  195 bits (497), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 6/153 (3%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           +R+LN  SD   L P+ Y   W+ Y  A  + W   E+ +  DL  ++    L ++E+  
Sbjct: 2   RRILNKESDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEK---LNENEKHF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+     R +   E +++   Q   E +HS T+  +I +   D
Sbjct: 59  IKHVLAFFAASDGIVLENLASKFLREVQITEAKKFYSFQIAVENIHSETYSLLIDNYIKD 118

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           E E   LF+    +P++  KA WA ++    +S
Sbjct: 119 EKERLNLFHAIENIPAVKNKALWAAKWINDTNS 151


>gi|17551968|ref|NP_497821.1| RiboNucleotide Reductase family member (rnr-2) [Caenorhabditis
           elegans]
 gi|1172941|sp|P42170|RIR2_CAEEL RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|3873950|emb|CAA84688.1| C. elegans protein C03C10.3, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 381

 Score =  195 bits (496), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 49/177 (27%), Positives = 75/177 (42%), Gaps = 18/177 (10%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           D+ ML    +   + PLK+   W  Y  A  + W   EV +  D+  W+  NG   DE+ 
Sbjct: 61  DEPMLQDLDNRFVIFPLKHHDIWNFYKKAVASFWTVEEVDLGKDMNDWEKMNG---DEQY 117

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I R L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  +I +   
Sbjct: 118 FISRILAFFAASDGIVNENLCERFSNEVQVSEARFFYGFQIAIENIHSEMYSKLIETYIR 177

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           DE E   LFN   E   I  KA+WAL++               +++    R + F  
Sbjct: 178 DETERNTLFNAVDEFEFIKKKADWALRWI------------SDKKASFAERLIAFAA 222


>gi|124808087|ref|XP_001348226.1| ribonucleotide reductase small subunit [Plasmodium falciparum 3D7]
 gi|23497116|gb|AAN36665.1|AE014816_50 ribonucleotide reductase small subunit [Plasmodium falciparum 3D7]
          Length = 349

 Score =  195 bits (495), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 6/154 (3%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++++LN  SD   L P+ Y   W+ Y  A  + W   E+ +  DL  ++    L ++E+ 
Sbjct: 30  NEKILNKESDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEK---LNENEKH 86

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            IK  L FFA+S+ +V  N+     R +   E +++   Q   E +HS T+  +I +   
Sbjct: 87  FIKHVLAFFAASDGIVLENLASKFLREVQITEAKKFYSFQIAVENIHSETYSLLIDNYIK 146

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           DE E   LF+    +P++  KA WA ++    +S
Sbjct: 147 DEKERLNLFHAIENIPAVKNKALWAAKWINDTNS 180


>gi|1710398|sp|P50650|RIR2_PLAF4 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase R2 subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|555613|gb|AAA50170.1| ribonucleotide reductase small subunit [Plasmodium falciparum]
          Length = 349

 Score =  195 bits (495), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 6/154 (3%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++++LN  SD   L P+ Y   W+ Y  A  + W   E+ +  DL  ++    L ++E+ 
Sbjct: 30  NEKILNKESDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEK---LNENEKH 86

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            IK  L FFA+S+ +V  N+     R +   E +++   Q   E +HS T+  +I +   
Sbjct: 87  FIKHVLAFFAASDGIVLENLASKFLREVQITEAKKFYSFQIAVENIHSETYSLLIDNYIK 146

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           DE E   LF+    +P++  KA WA ++    +S
Sbjct: 147 DEKERLNLFHAIENIPAVKNKALWAAKWINDTNS 180


>gi|241951880|ref|XP_002418662.1| ribonucleoside diphosphate reductase, putative [Candida
           dubliniensis CD36]
 gi|223642001|emb|CAX43965.1| ribonucleoside diphosphate reductase, putative [Candida
           dubliniensis CD36]
          Length = 394

 Score =  194 bits (494), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 17/182 (9%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           +    ++ +L      + + P+KY   W+ Y  +  + W   E+ +  DLA W +K  + 
Sbjct: 65  KQEESNEPLLTKDKTRHTIYPIKYPELWQFYKKSLASFWTAEELDLSKDLADWNNK--MN 122

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           ++ER  I R L FFA+S+ +V  N+V      +  PE +     Q   E +HS T+  +I
Sbjct: 123 ENERFFISRVLAFFAASDGIVNENLVENFCAEVQIPEAQSVYKFQIMMENIHSETYSLLI 182

Query: 136 TSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
            +   D  E   LFN    +P I  KA+WA+++ Q               +    R + F
Sbjct: 183 ETYFKDPEEADFLFNAIENIPFIREKADWAIRWIQ------------DEDALYAERLVAF 230

Query: 193 LC 194
             
Sbjct: 231 AA 232


>gi|224000239|ref|XP_002289792.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220975000|gb|EED93329.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 335

 Score =  193 bits (492), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 45/173 (26%), Positives = 71/173 (41%), Gaps = 18/173 (10%)

Query: 25  LNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR 84
            +       L P+ Y   W  Y     + W   E+ +  DL+ W  K  L  DER  I  
Sbjct: 6   TDEEGSRFSLFPIAYPDLWSMYKQHVASFWTADEIDLSADLSDWHKK--LNPDERHFISM 63

Query: 85  NLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG- 143
            L FFA ++ +V  N+     R ++ PE R +   Q   E++H  T+  +I +   D   
Sbjct: 64  VLAFFAGADGIVVENLAERFCREVTVPEARCFYGFQMAMESIHQETYCLLIDTYITDPKV 123

Query: 144 --ELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
              LF+ +  VPS+  KA+WA +Y  + +S                R + F  
Sbjct: 124 RERLFSAHATVPSVERKASWAQRYIGSKAS-------------FAERLVAFAA 163


>gi|301166951|emb|CBW26530.1| putative ribonucleoside-diphosphate reductase small chain subunit
           [Bacteriovorax marinus SJ]
          Length = 322

 Score =  193 bits (491), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 48/176 (27%), Positives = 74/176 (42%), Gaps = 19/176 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
             +L    D   L PLKY   +E Y +     W   E+    D+  W+    L  DE+  
Sbjct: 2   DPILAPNDDRFVLFPLKYHSIFEMYKNHMAVFWTADELDFASDITDWEK---LNKDEQHF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+ L  Y  +  PE R +   Q   E +HS T+  +I +   D
Sbjct: 59  IKHILAFFAASDGIVNENLALRFYNDVQIPEARCFYGFQIAMENIHSETYSLLIDTYVKD 118

Query: 142 E---GELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
                ELF+     P +  KA+WA+++ Q+             +     R + F  
Sbjct: 119 PKEKDELFHAVTHFPFVEKKADWAMKWMQS-------------KRSFAERLIAFAA 161


>gi|303272255|ref|XP_003055489.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226463463|gb|EEH60741.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 322

 Score =  193 bits (490), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 47/174 (27%), Positives = 73/174 (41%), Gaps = 19/174 (10%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           ML    D   L P+K+   W+ Y  A  + W   E+ +  DL  W     LT+ E+  I 
Sbjct: 1   MLQDNEDRFSLFPVKHVEVWKMYKQAVASFWNAEEIDLSTDLRDW---GNLTESEQHFIS 57

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD-- 141
             L FFA+S+ +V  N+ L   + +  PE R +   Q   E +HS T+  ++ +   D  
Sbjct: 58  HVLAFFAASDGIVLENLGLRFLKDVQMPEARAFYGFQLAMENIHSETYGLLLETYIKDSV 117

Query: 142 -EGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
               L      VP++  KA WAL++ Q+                   R + F C
Sbjct: 118 QRKHLMRAIHTVPTVGRKAQWALRWIQSSEC-------------FAERLIAFAC 158


>gi|172448|gb|AAA34987.1| ribonucleotide reductase subunit 2 (RNR2) [Saccharomyces
           cerevisiae]
          Length = 399

 Score =  193 bits (490), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 48/179 (26%), Positives = 77/179 (43%), Gaps = 23/179 (12%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPT---EVPMQDDLALWKSKNGLTDD 77
           ++ +LN   +   L P+KY   W+ Y     + W      E+ +  D+  W   N + ++
Sbjct: 75  EEPLLNEDKERTVLFPIKYHEIWQAY---EASFWTAETAEEIDLSKDIHDWN--NRMNEN 129

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           ER  I R L FFA+S+ +V  N+V      +  PE + +   Q   E +HS T+  +I +
Sbjct: 130 ERFFISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDT 189

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
              D  E   LFN    +P I  KA WAL++ Q               +    R + F 
Sbjct: 190 YIKDPKESEFLFNAIHTIPEIGEKAEWALRWIQ------------DADALFGERLVAFA 236


>gi|268575178|ref|XP_002642568.1| C. briggsae CBR-RNR-2 protein [Caenorhabditis briggsae]
 gi|187023588|emb|CAP37241.1| CBR-RNR-2 protein [Caenorhabditis briggsae AF16]
          Length = 365

 Score =  193 bits (490), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 18/185 (9%)

Query: 13  GEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
            +      D+ +L    +   + PL++   W+ Y  A  + W   EV +  D+  W+  N
Sbjct: 37  PKGNALDADEPLLQDLDNRFVIFPLRHHEIWQFYKKAVASFWTVEEVDLGKDMNDWEKMN 96

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
           G   DE+  I R L FFA+S+ +V  N+       +   E R +   Q   E +HS  + 
Sbjct: 97  G---DEQYFISRVLAFFAASDGIVNENLCERFSNEVKVSEARFFYGFQIAIENIHSEMYS 153

Query: 133 YIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRS 189
            +I +   DE E   LFN   E   I  KA+WAL++                ++    R 
Sbjct: 154 KLIETYIRDEKERMKLFNAIFEFEFIKKKADWALRWI------------SDTKASFAERL 201

Query: 190 LRFLC 194
           + F  
Sbjct: 202 IAFAA 206


>gi|221060582|ref|XP_002260936.1| ribonucleotide reductase small subunit [Plasmodium knowlesi strain
           H]
 gi|193811010|emb|CAQ42908.1| ribonucleotide reductase small subunit,putative [Plasmodium
           knowlesi strain H]
          Length = 349

 Score =  193 bits (490), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 6/160 (3%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           ++    ++++L+  +D   L P+ Y   W+ Y  A  + W   E+ +  DL  ++    L
Sbjct: 24  QKSKEANEKILSKETDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEK---L 80

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            ++E+  IK  L FFA+S+ +V  N+     R +   E +++   Q   E +HS T+  +
Sbjct: 81  NENEKHFIKHVLAFFAASDGIVLENLASKFLRQVQITEAKKFYSFQIAVENIHSETYSLL 140

Query: 135 ITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           I +   DE E   LF+    +P++  KA WA ++    +S
Sbjct: 141 IDNYIKDEKERMNLFHAIENIPAVKNKALWAAKWINDTNS 180


>gi|156102402|ref|XP_001616894.1| ribonucleoside-diphosphate reductase small chain [Plasmodium vivax
           SaI-1]
 gi|148805768|gb|EDL47167.1| ribonucleoside-diphosphate reductase small chain, putative
           [Plasmodium vivax]
          Length = 349

 Score =  192 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 6/160 (3%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           ++    ++++L+  +D   L P+ Y   W+ Y  A  + W   E+ +  DL  ++    L
Sbjct: 24  QKSKEANEKILSKETDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEK---L 80

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            D+E+  IK  L FFA+S+ +V  N+     R +   E +++   Q   E +HS T+  +
Sbjct: 81  NDNEKHFIKHVLAFFAASDGIVLENLASKFLRQVKITEAKKFYAFQIAVENIHSETYSLL 140

Query: 135 ITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           I +   DE E   LF+    +P++  KA WA ++    +S
Sbjct: 141 IDNYIKDEKERMNLFHAIENIPAVKNKALWAAKWINDTNS 180


>gi|84998662|ref|XP_954052.1| ribonucleotide reductase R2 subunit or ribonucleoside-diphosphate
           reductase small chain [Theileria annulata]
 gi|65305050|emb|CAI73375.1| ribonucleotide reductase R2 subunit or ribonucleoside-diphosphate
           reductase small chain, putative [Theileria annulata]
          Length = 322

 Score =  192 bits (489), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 48/185 (25%), Positives = 80/185 (43%), Gaps = 11/185 (5%)

Query: 12  AGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSK 71
           + + +    ++ +LN   +   L P+ Y   WE Y  A  + W   E+    D   W   
Sbjct: 7   SEKMKALEAEEFILNRNPNRTCLFPIVYPDFWEWYKKAQASFWTAEEIDFSMDYNHWHK- 65

Query: 72  NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
             L  DER  I   L FFA+S+ +V  N+ L   R +  PE + +   Q   E +HS T+
Sbjct: 66  --LNKDERHFITNVLAFFAASDGIVLENLALKFLRDVKIPEAQSFYSFQIAVENIHSETY 123

Query: 132 QYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
             +I +   DE E   LF     + ++  KANWA ++    +S     + +R  S    +
Sbjct: 124 SLLIENYVKDEAEKRRLFMAIETIDAVKDKANWAKKWITDENS-----FAERIVSNFKNK 178

Query: 189 SLRFL 193
            + + 
Sbjct: 179 LINYY 183


>gi|308490981|ref|XP_003107682.1| CRE-RNR-2 protein [Caenorhabditis remanei]
 gi|308250551|gb|EFO94503.1| CRE-RNR-2 protein [Caenorhabditis remanei]
          Length = 377

 Score =  192 bits (488), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 46/187 (24%), Positives = 78/187 (41%), Gaps = 18/187 (9%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
           +  E      ++ +L    +   + PL++   W+ Y  A  + W   EV +  D+  W+ 
Sbjct: 47  EETEGNALDANEPLLQDLDNRFVIFPLRHHEIWQFYKKAVASFWTVEEVDLGKDMNDWEK 106

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            NG   DE+  I R L FFA+S+ +V  N+       +   E R +   Q   E +HS  
Sbjct: 107 MNG---DEQYFISRVLAFFAASDGIVNENLCERFSNEVKVSEARFFYGFQIAIENIHSEM 163

Query: 131 FQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILT 187
           +  +I +   DE E   LFN   E   I  KA+WA+++               +++    
Sbjct: 164 YSKLIETYIRDEKERLTLFNAIFEFEFIKKKADWAMKWI------------SDKKASFAE 211

Query: 188 RSLRFLC 194
           R + F  
Sbjct: 212 RLIAFAA 218


>gi|255080138|ref|XP_002503649.1| predicted protein [Micromonas sp. RCC299]
 gi|226518916|gb|ACO64907.1| predicted protein [Micromonas sp. RCC299]
          Length = 324

 Score =  192 bits (488), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 48/174 (27%), Positives = 74/174 (42%), Gaps = 19/174 (10%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           ML    D   L P+K    W+ Y  A  + W   E+ +  D   W +   L D+E+  I 
Sbjct: 1   MLQDNEDRFCLFPIKEHAVWKMYKQAEASFWSAEEIDLSMDYKDWVT---LNDNEQHFIS 57

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD-- 141
             L FFA+S+ +V  N+ L   + +  PE R +   Q   E +HS T+  +I +   D  
Sbjct: 58  HVLAFFAASDGIVLENLGLRFMKDVQLPEARAFYAFQLAIENIHSETYGLLIDTYVKDSV 117

Query: 142 -EGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            +  LF     VP++  KA WAL++ Q+                   R + F C
Sbjct: 118 KKRHLFRAIHNVPTVARKAQWALKWIQSSEC-------------FAERLVAFAC 158


>gi|301097698|ref|XP_002897943.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
           infestans T30-4]
 gi|262106388|gb|EEY64440.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
           infestans T30-4]
          Length = 360

 Score =  192 bits (488), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 6/162 (3%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           + +   +S  +  E    +  +  L A  +   L P++    W+ Y  A  + W   E+ 
Sbjct: 33  LKDELEMSEYKRKELSGELQPEPYLVANPNRFVLFPIQEHDVWQMYKKAEASFWTAEELD 92

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           +  DL  W     LTD+ER  IK  L FFA+S+ +V  N+ +     +  PE R +   Q
Sbjct: 93  LVHDLNDWAK---LTDNERHFIKHVLAFFAASDGIVNENLAMNFSNEVQIPEARCFYGFQ 149

Query: 121 AFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKA 159
              E +HS  +  +I +   D  E   L      +P +  K 
Sbjct: 150 IAIENIHSEVYSLLIDTYIKDAVEKDHLLRAIETIPCVQKKH 191


>gi|193784694|dbj|BAG53847.1| unnamed protein product [Homo sapiens]
 gi|193787382|dbj|BAG52588.1| unnamed protein product [Homo sapiens]
          Length = 297

 Score =  191 bits (487), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 10/151 (6%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            Y  A  + W   EV +  D+  W+S   L  +ER  I   L FFA+S+ +V  N+V   
Sbjct: 1   MYKKAEASFWTAEEVDLSKDIQHWES---LKPEERYFISHVLAFFAASDGIVNENLVERF 57

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANW 161
            + +   E R +   Q   E +HS  +  +I +   D  E   LFN    +P +  KA+W
Sbjct: 58  SQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLFNAIETMPCVKKKADW 117

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           AL++     +     + +R  +      + F
Sbjct: 118 ALRWIGDKEA----TYGERVVAFAAVEGIFF 144


>gi|290995765|ref|XP_002680453.1| predicted protein [Naegleria gruberi]
 gi|284094074|gb|EFC47709.1| predicted protein [Naegleria gruberi]
          Length = 338

 Score =  191 bits (487), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 19/170 (11%)

Query: 28  RSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLG 87
                 L PL Y   WE Y     + W   EV +  D+  W+    L  +E+  IK  L 
Sbjct: 25  NPHRFVLFPLHYPKMWEMYKKTMASFWTVEEVDLHTDITEWEK---LNSNEQHFIKTVLA 81

Query: 88  FFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE--- 144
           FFA+S+ +V  N+       +  PE R +   Q   E +H+  +  +I +L  D+ E   
Sbjct: 82  FFAASDGIVNENLCQQFMAQVQVPEARCFYGFQIAIENIHAEMYSTLIETLIKDQRERNR 141

Query: 145 LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           LF+    VPS+  KANWAL++  + +                 R L F C
Sbjct: 142 LFHAIDTVPSVQKKANWALKWINSEN-------------LFAERLLAFAC 178


>gi|116326775|ref|YP_803312.1| hypothetical protein TNAV2c_gp089 [Trichoplusia ni ascovirus 2c]
 gi|102231783|gb|ABF70606.1| hypothetical protein [Trichoplusia ni ascovirus 2c]
          Length = 269

 Score =  191 bits (486), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 45/151 (29%), Positives = 70/151 (46%), Gaps = 10/151 (6%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            Y  A  + W   EV +  DL+ W   + L DDE+  IK  L FFA+S+ +V  N+V   
Sbjct: 1   MYKKAEASFWTVEEVDLSKDLSDW---DKLKDDEKHFIKHILAFFAASDGIVNENLVERF 57

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANW 161
            + +   E R +   Q   E VHS  +  +I +   D  E   LFN    +P I  KA+W
Sbjct: 58  SQEVQITEARCFYGFQIAMENVHSEMYSLLIDTYIRDSDERDYLFNAIETLPCIKKKADW 117

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           AL++  + S+     + +R  +      + F
Sbjct: 118 ALKWISSNSA----NFAERIVAFAAVEGIFF 144


>gi|122921307|pdb|2O1Z|A Chain A, Plasmodium Vivax Ribonucleotide Reductase Subunit R2
           (Pv086155)
 gi|122921308|pdb|2O1Z|B Chain B, Plasmodium Vivax Ribonucleotide Reductase Subunit R2
           (Pv086155)
          Length = 311

 Score =  191 bits (485), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 6/160 (3%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           ++    ++++L+  +D   L P+ Y   W+ Y  A  + W   E+ +  DL  ++    L
Sbjct: 23  QKSKEANEKILSKETDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEK---L 79

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            D+E+  IK  L FFA+S+ +V  N+     R +   E +++   Q   E +HS T+  +
Sbjct: 80  NDNEKHFIKHVLAFFAASDGIVLENLASKFLRQVKITEAKKFYAFQIAVENIHSETYSLL 139

Query: 135 ITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           I +   DE E   LF+    +P++  KA WA ++    +S
Sbjct: 140 IDNYIKDEKERMNLFHAIENIPAVKNKALWAAKWINDTNS 179


>gi|158518255|gb|AAC48087.2| Hypothetical protein F58F9.1 [Caenorhabditis elegans]
          Length = 500

 Score =  190 bits (484), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 6/154 (3%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L   ++   + P+ +   WE Y  A    W   EV +  D++ W+    LT DER  
Sbjct: 307 EPLLAPNNNRFVVHPIVHRDIWEFYKKAVACFWTSEEVDLGKDMSHWE---ILTSDERQF 363

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           I   L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  ++ +   D
Sbjct: 364 ISSILAFFAASDGIVTENLCSRFSTEVQVTEARFFYGFQIAVENIHSEMYAKLLEAYIRD 423

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSP 172
           + E   LFN       I AKA+W L++    ++P
Sbjct: 424 DAERNILFNAITTFKFIKAKADWCLRWISDHNAP 457


>gi|282890382|ref|ZP_06298910.1| hypothetical protein pah_c016o114 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499764|gb|EFB42055.1| hypothetical protein pah_c016o114 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 350

 Score =  190 bits (484), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 99/182 (54%), Positives = 127/182 (69%), Gaps = 2/182 (1%)

Query: 13  GEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSK 71
            E       KR+LN +  DVNQL+PLKY WAWE YL+ C+N+WMP+EVPMQ D+ LWKS 
Sbjct: 13  EEAEAAAQQKRILNCKQVDVNQLMPLKYHWAWEHYLNGCHNNWMPSEVPMQKDIELWKS- 71

Query: 72  NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
           N L++DERL+I RNLGFF+++ESLV NNIVLAI++HL+N E RQYLLRQAFEEAVH+HTF
Sbjct: 72  NRLSNDERLVIMRNLGFFSTAESLVGNNIVLAIFKHLTNAEARQYLLRQAFEEAVHTHTF 131

Query: 132 QYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
            YI+ SL LD+ E+F+MY  V SI AK  + ++ T+ +    F           L   + 
Sbjct: 132 HYIVESLSLDQREVFDMYNAVNSIHAKDAFEMKLTEEVMQEGFTTDTPEGVQTFLKNLIG 191

Query: 192 FL 193
           F 
Sbjct: 192 FY 193


>gi|10344|emb|CAA26307.1| unnamed protein product [Spisula solidissima]
          Length = 300

 Score =  190 bits (483), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 10/151 (6%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            Y  A  + W   EV +  D+A W+S   L  +E+  I   L FFA+S+ +V  N+V   
Sbjct: 1   MYKKAEASFWTAEEVDLSKDMAHWES---LKKEEKHFISHVLAFFAASDGIVNENLVERF 57

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANW 161
            + +   E R +   Q   E +HS  +  +I +   D  E   LFN    +P +  KA+W
Sbjct: 58  SKEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPQERDFLFNAIETMPCVKEKADW 117

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           A+++    SS     + +R  +      + F
Sbjct: 118 AMRWINDDSS----SYAERVVAFAAVEGIFF 144


>gi|15150459|ref|NP_150454.1| LSDV020 ribonucleotide reductase small subunit [Lumpy skin disease
           virus NI-2490]
 gi|15149031|gb|AAK84981.1| LSDV020 ribonucleotide reductase small subunit [Lumpy skin disease
           virus NI-2490]
 gi|22595554|gb|AAN02587.1| ribonucleotide reductase small subunit [Lumpy skin disease virus
           NW-LW]
          Length = 321

 Score =  190 bits (483), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 44/176 (25%), Positives = 72/176 (40%), Gaps = 18/176 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L   S    + P+ Y   W  Y  A  + W   EV +  DLA WK    L+++E+  
Sbjct: 2   EPILKETSSRFVVFPILYKEIWVMYKKAVASFWTVDEVDLSKDLADWKK---LSNEEQYF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+    Y  +   E R +   Q   E +HS  +  +I +    
Sbjct: 59  IKNILAFFAASDGIVNENLAERFYSEVQWSEARCFYGFQIAMENIHSEMYSLLIDTYISS 118

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             E   LFN    +  I  K+ WA ++               +++    R + F  
Sbjct: 119 TKEKEHLFNAIETMDFIKKKSEWARKWISN------------KKASFGERLIAFAA 162


>gi|13876672|gb|AAK43560.1| ribonucleoside reductase [lumpy skin disease virus]
          Length = 321

 Score =  190 bits (483), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 44/176 (25%), Positives = 71/176 (40%), Gaps = 18/176 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L   S    + P+ Y   W  Y  A  + W   EV +  DLA WK    L ++E+  
Sbjct: 2   EPILKETSSRFVVFPILYKEIWVMYKKAVASFWTVDEVDLSKDLADWKK---LNNEEQYF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+    Y  +   E R +   Q   E +HS  +  +I +    
Sbjct: 59  IKNILAFFAASDGIVNENLAERFYSEVQWSEARCFYGFQIAMENIHSEMYSLLIDTYISS 118

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             E   LFN    +  I  K+ WA ++               +++    R + F  
Sbjct: 119 TKEKEHLFNAIETMDFIKKKSEWARKWISN------------KKASFGERLIAFAA 162


>gi|321263951|ref|XP_003196693.1| ribonucleotide reductase small subunit [Cryptococcus gattii WM276]
 gi|317463170|gb|ADV24906.1| Ribonucleotide reductase small subunit, putative [Cryptococcus
           gattii WM276]
          Length = 430

 Score =  190 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 55/197 (27%), Positives = 81/197 (41%), Gaps = 21/197 (10%)

Query: 4   NTGLSPIQAGEKRVN---VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           N G  P    +  +     +++ +L        L P+KY   W+ Y  A  + W   E+ 
Sbjct: 79  NKGRKPAGKDKMPMKFLEEEEEDILRESDSRFVLFPIKYNEIWQAYKRAQASFWTAEELD 138

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
              DL  W  +  +T+ ER  I R L FFA+S+ +V  NIV      +   E R +   Q
Sbjct: 139 FGHDLIDWHDR--MTEQERFFILRILAFFAASDGIVGENIVSQFSLEVQIAEARAFYSFQ 196

Query: 121 AFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYW 177
           +  E VHS T+  +I +   D  E   LF     +P I  KA+WAL+Y            
Sbjct: 197 SMIEQVHSETYSLLIETYVRDAQEKDFLFRGMENIPCIKQKADWALKYITDEL------- 249

Query: 178 NKRRRSRILTRSLRFLC 194
                    TR + F C
Sbjct: 250 ------PFRTRLVAFAC 260


>gi|22595713|gb|AAN02745.1| ribonucleotide reductase small subunit [lumpy skin disease virus]
          Length = 321

 Score =  190 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 44/176 (25%), Positives = 71/176 (40%), Gaps = 18/176 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L   S    + P+ Y   W  Y  A  + W   EV +  DLA WK    L ++E+  
Sbjct: 2   EPILKETSSRFVVFPILYKEIWVMYKKAVASFWTVDEVDLSKDLADWKK---LNNEEQYF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+    Y  +   E R +   Q   E +HS  +  +I +    
Sbjct: 59  IKNILAFFAASDGIVNENLAERFYSEVQWSEARCFYGFQIAMENIHSEMYSLLIDTYISS 118

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             E   LFN    +  I  K+ WA ++               +++    R + F  
Sbjct: 119 TKEKEHLFNAIETMDFIKKKSEWARKWISN------------KKASFGERLIAFAA 162


>gi|71033209|ref|XP_766246.1| ribonucleotide-diphosphate reductase small subunit [Theileria parva
           strain Muguga]
 gi|68353203|gb|EAN33963.1| ribonucleotide-diphosphate reductase small subunit, putative
           [Theileria parva]
          Length = 308

 Score =  190 bits (482), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 6/154 (3%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +LN   +   L P+ Y   WE Y  A  + W   E+    D   W     L  DER 
Sbjct: 7   EEFLLNRNPNRTSLFPIVYPEFWEWYKKAQASFWTAEEIDFSMDYNHWH---RLNKDERH 63

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I   L FFA+S+ +V  N+ L   R +  PE + +   Q   E +HS T+  +I +   
Sbjct: 64  FITNVLAFFAASDGIVLENLALKFLRDVKIPEAQSFYSFQIAVENIHSETYSLLIENYVK 123

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           DE E   LF     + ++  KANWA ++    +S
Sbjct: 124 DEAEKRRLFMAIETIDAVKDKANWAKKWITDENS 157


>gi|219110949|ref|XP_002177226.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411761|gb|EEC51689.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 409

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 43/167 (25%), Positives = 68/167 (40%), Gaps = 18/167 (10%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
              L P+++   W  Y     + W   E+ +  DL  W  +  L D+ER  I   L FFA
Sbjct: 93  RFSLFPIEHDDLWGMYKQHVASFWTVDEIDLSADLTDWHER--LNDNERHFISMVLAFFA 150

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG---LDEGELFN 147
            ++ +V  N+     R ++ PE R +   Q   E +H  T+  +I S      D   LF 
Sbjct: 151 GADGIVVENLAERFCREVTVPEARAFYGFQMAMEGIHQETYCLLIDSYISDPKDREMLFA 210

Query: 148 MYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            + +VPS+  KA WA +Y  +              +    R + F  
Sbjct: 211 AHTKVPSVEKKARWAQRYIGS-------------DASFAERLVAFAA 244


>gi|225712968|gb|ACO12330.1| Ribonucleoside-diphosphate reductase small chain [Lepeophtheirus
           salmonis]
          Length = 335

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 68/180 (37%), Gaps = 19/180 (10%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
              ++ +L   +    + P+ Y   W  Y  A    W   EV +  DL  W     L  D
Sbjct: 12  QEKNEIILTPNNSKYVMFPIVYKDIWFMYKKALATFWTVEEVDLSKDLMDWAK---LNKD 68

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+  I   L FFA+S+ +V  N++      +   E R +   Q   E +HS  +  +I +
Sbjct: 69  EKHFISNVLAFFAASDGIVNENLLERFASEVQIAEARSFYGFQIMIENIHSEMYSLLIDT 128

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
              D+ E   LFN    +  +  KA WAL++                     TR + F  
Sbjct: 129 YIEDDKEKDKLFNSILTIECVKKKAEWALRWITG-------------DKPFATRLVAFAA 175


>gi|193206379|ref|NP_500944.2| hypothetical protein F58F9.1 [Caenorhabditis elegans]
          Length = 581

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 6/154 (3%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L   ++   + P+ +   WE Y  A    W   EV +  D++ W+    LT DER  
Sbjct: 307 EPLLAPNNNRFVVHPIVHRDIWEFYKKAVACFWTSEEVDLGKDMSHWE---ILTSDERQF 363

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           I   L FFA+S+ +V  N+       +   E R +   Q   E +HS  +  ++ +   D
Sbjct: 364 ISSILAFFAASDGIVTENLCSRFSTEVQVTEARFFYGFQIAVENIHSEMYAKLLEAYIRD 423

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSP 172
           + E   LFN       I AKA+W L++    ++P
Sbjct: 424 DAERNILFNAITTFKFIKAKADWCLRWISDHNAP 457


>gi|255724924|ref|XP_002547391.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
           tropicalis MYA-3404]
 gi|240135282|gb|EER34836.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
           tropicalis MYA-3404]
          Length = 387

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 9/175 (5%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L        + P+KY   W  Y  +  + W   E+ +  D   W++K  +  DER 
Sbjct: 63  NEPLLREDPSRRTVFPIKYPEIWTFYKKSVASFWTAEEIDLSKDFDDWENK--MNKDERF 120

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I R L FFA+S+ +V  N+V      +  PE +     Q   E +HS T+  +I +   
Sbjct: 121 FISRVLAFFAASDGIVNENLVENFCTEVKLPEAKSVYKFQIMMENIHSETYSLLIETYFK 180

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           D  E   LFN    +  I  KA+WA+++ Q   +     + +R  +      + F
Sbjct: 181 DPKEADFLFNAIDNIKYIGEKADWAIRWIQDEEA----LFAERLVAFAAIEGIFF 231


>gi|269865122|ref|XP_002651812.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063829|gb|EED42244.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 336

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 19/176 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L+       + P++Y   WE Y    +  W   EV M  D   +   + LT +E+  
Sbjct: 26  EPLLDEAKKRYVIFPIQYPEIWEFYKMHESTFWTVEEVDMTFDCEHF---STLTPNEQFF 82

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+V      +   E + +   Q   E +HS  +  +I +L  D
Sbjct: 83  IKYVLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAIENIHSEMYSKLIETLIRD 142

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + E   LFN    +PSI  KA WA ++  +              +   TR + F C
Sbjct: 143 KEEQTYLFNAIENIPSIRKKALWAQKWIAS-------------DTSFDTRCVAFAC 185


>gi|108763495|ref|YP_633213.1| ribonucleoside-diphosphate reductase subunit beta [Myxococcus
           xanthus DK 1622]
 gi|108467375|gb|ABF92560.1| ribonucleoside-diphosphate reductase, beta subunit [Myxococcus
           xanthus DK 1622]
          Length = 349

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 57/187 (30%), Positives = 92/187 (49%), Gaps = 7/187 (3%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           ++   +     +  +LN   ++  L P+ Y   +E Y +A  N W   EV    DL   +
Sbjct: 1   METPRRSARSTEAMLLNPGLNL-TLRPMAYPQFFEMYRNAIKNTWTVEEVDFSTDLVDLR 59

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
           SK  +TD ER +I R + FFA+ +S+V NN+VL +Y+HL+ PE R YL RQ +EEA+H  
Sbjct: 60  SK--MTDAERHLIHRLVAFFATGDSIVGNNLVLNLYKHLNAPEARMYLSRQLYEEALHVQ 117

Query: 130 TFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRIL 186
            +  ++ +   D  E    F     +PSI  KA + +++  ++           RR   L
Sbjct: 118 FYLTLLDTYVPDPAERAMAFAAVDNIPSIQRKAQFCMKWMDSIQGLDTLQTKAHRRQ-FL 176

Query: 187 TRSLRFL 193
              + F 
Sbjct: 177 LNLICFA 183


>gi|70936723|ref|XP_739266.1| ribonucleotide reductase small subunit [Plasmodium chabaudi
           chabaudi]
 gi|56516136|emb|CAH80811.1| ribonucleotide reductase small subunit, putative [Plasmodium
           chabaudi chabaudi]
          Length = 349

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 46/177 (25%), Positives = 82/177 (46%), Gaps = 9/177 (5%)

Query: 1   MANNTGLSPIQAGEKRVNVD---DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPT 57
           ++ +T  S  +     +  +   ++++LN  S    L P+ Y   W  Y  A  + W   
Sbjct: 7   ISKSTSFSKQEKEFSDLQKNKECNEKILNKESSRFTLHPIMYPEVWNFYKKAEASFWTAE 66

Query: 58  EVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYL 117
           E+ +  DL  ++    L  +E+  IK  L FFA+S+ +V  N+     R +   E +++ 
Sbjct: 67  EIDLSSDLKDFEK---LNVNEKHFIKHVLAFFAASDGIVLENLASKFLREVQIIEAKKFY 123

Query: 118 LRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
             Q   E +HS T+  +I +   DE E   LF+    +P+I  KA WA ++    +S
Sbjct: 124 AFQIAVENIHSETYSLLIDNYIRDEKERLNLFHAIENIPAIKNKALWAAKWINDTNS 180


>gi|21492474|ref|NP_659593.1| Ribonucleotide reductase, small subunit [Sheeppox virus]
          Length = 321

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 43/176 (24%), Positives = 71/176 (40%), Gaps = 18/176 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L   S    + P+ Y   W  Y  A  + W   EV +  DL+ WK    L ++E+  
Sbjct: 2   EPILKETSSRFVVFPILYKEIWVMYKKAVASFWTVDEVDLSKDLSDWKK---LNNEEQYF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+    Y  +   E R +   Q   E +HS  +  +I +    
Sbjct: 59  IKNILAFFAASDGIVNENLAERFYSEVQWSEARCFYGFQIAMENIHSEMYSLLIDTYISS 118

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             E   LFN    +  I  K+ WA ++               +++    R + F  
Sbjct: 119 TKEKEYLFNAIETMDFIKKKSEWARKWISN------------KKASFGERLIAFAA 162


>gi|156087150|ref|XP_001610982.1| ribonucleoside-diphosphate reductase small subunit [Babesia bovis
           T2Bo]
 gi|154798235|gb|EDO07414.1| ribonucleoside-diphosphate reductase small subunit, putative
           [Babesia bovis]
          Length = 339

 Score =  188 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 11/176 (6%)

Query: 20  DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER 79
            ++ +L    + N L P+KY   WE Y  A  + W   E+ +  DL  W     LT+ E 
Sbjct: 19  SEEFILVEDPNRNGLYPIKYPDFWEWYKKAQASFWTSEEIDLSSDLKDW---GTLTEGEH 75

Query: 80  LMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
             IK  L FFA+S+ +V  N+ L   + +  PE + +   Q   E +HS T+  +I    
Sbjct: 76  HFIKNVLAFFAASDGIVLENLALRFLKDVKLPEAKFFYCFQITVENIHSETYSLLIEQYI 135

Query: 140 LDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
            DE E   LF     + ++  KA WA ++           + +R  +      + F
Sbjct: 136 RDEAEKDRLFRAIETIDAVRDKAIWAAKWMN-----DEKSFAERIVAYAAVEGIFF 186


>gi|148912897|ref|YP_001293211.1| hypothetical protein GTPV_gp017 [Goatpox virus Pellor]
          Length = 321

 Score =  188 bits (479), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 44/176 (25%), Positives = 71/176 (40%), Gaps = 18/176 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L   S    + P+ Y   W  Y  A  + W   EV +  DLA WK    L ++E+  
Sbjct: 2   EPILKETSSRFVVFPILYKEIWVMYKKAVASFWTVDEVDLSKDLADWKK---LNNEEQYF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+    Y  +   E R +   Q   E +HS  +  +I +    
Sbjct: 59  IKNILAFFAASDGIVNENLAERFYSEVQWSEARCFYGFQIAIENIHSEMYSLLIDTYISS 118

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             E   LFN    +  I  K+ WA ++               +++    R + F  
Sbjct: 119 TKEKEHLFNAIETMDFIKKKSEWARKWISN------------KKASFGERLIAFAA 162


>gi|322510876|gb|ADX06189.1| putative ribonucleotide reductase small subunit [Organic Lake
           phycodnavirus 2]
          Length = 324

 Score =  188 bits (479), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 48/179 (26%), Positives = 75/179 (41%), Gaps = 18/179 (10%)

Query: 19  VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
            + + +L    +   + P+     W+ Y    +  W P E+    D+  W   N L  DE
Sbjct: 4   KNTEPLLTEDDNRFVMFPVSDETIWKMYKKQVDCFWRPEEIDTSKDMTHW---NKLNTDE 60

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           +  IK  L FFASS+ +V  N+ L     +   E R +   Q   E +HS T+  +I S 
Sbjct: 61  QYFIKMILAFFASSDGIVLENLGLRFMNEVQLSEARAFYGFQIAMENIHSETYSLLIDSY 120

Query: 139 GLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             D  E   LF+     P I  K +WA+++ Q             ++S   TR + F C
Sbjct: 121 IKDSDEKHKLFHSLEHFPCIKKKGDWAMKWIQ------------DKKSSFATRLVAFAC 167


>gi|82538850|ref|XP_723858.1| ribonucleotide reductase small chain [Plasmodium yoelii yoelii str.
           17XNL]
 gi|145580416|pdb|2P1I|A Chain A, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580417|pdb|2P1I|B Chain B, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580418|pdb|2P1I|C Chain C, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580419|pdb|2P1I|D Chain D, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580420|pdb|2P1I|E Chain E, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580421|pdb|2P1I|F Chain F, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580422|pdb|2P1I|G Chain G, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|145580423|pdb|2P1I|H Chain H, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
           (Py03671)
 gi|23478298|gb|EAA15423.1| Ribonucleotide reductase, small chain [Plasmodium yoelii yoelii]
          Length = 349

 Score =  188 bits (478), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 6/160 (3%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           ++    ++++LN  S+   L P+ Y   W  Y  A  + W   E+ +  DL  ++    L
Sbjct: 24  QKSKESNEKILNKESNRFTLHPIMYPEVWNFYKKAEASFWTAEEIDLSSDLKDFEK---L 80

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
             +E+  IK  L FFA+S+ +V  N+     R +   E +++   Q   E +HS T+  +
Sbjct: 81  NVNEKHFIKHVLAFFAASDGIVLENLASKFLREVEIIEAKKFYSFQIAVENIHSETYSLL 140

Query: 135 ITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           I +   DE E   LF+    +P+I  KA WA ++    +S
Sbjct: 141 IDNYIKDEKERLNLFHAIENIPAIKNKALWAAKWINDTNS 180


>gi|269865926|ref|XP_002652096.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063168|gb|EED41960.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 330

 Score =  188 bits (477), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 19/176 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L+       + P++Y   WE Y    +  W   EV M  D   +   + LT +E+  
Sbjct: 26  EPLLDEAKKRYVIFPIQYPEIWEVYKMHESTFWTVEEVDMTFDCEHF---STLTPNEQFF 82

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+V      +   E + +   Q   E +HS  +  +I +L  D
Sbjct: 83  IKYVLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAIENIHSEMYSKLIETLIRD 142

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + E   LFN    +PSI  KA WA ++  +              +   TR + F C
Sbjct: 143 KEEQTYLFNAIENIPSIRKKALWAQKWIAS-------------DTSFDTRCVAFAC 185


>gi|323453718|gb|EGB09589.1| hypothetical protein AURANDRAFT_60022 [Aureococcus anophagefferens]
          Length = 393

 Score =  188 bits (477), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 19/170 (11%)

Query: 28  RSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLG 87
            S    L P+K    W  Y  A  + W   EV +  D   W+    L + ER  + R L 
Sbjct: 78  DSSRFTLFPIKDAGLWAMYKRAEASFWTAEEVDLGQDKQHWEQ---LDEGERYFLSRVLA 134

Query: 88  FFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE--- 144
           FFA+S+ +V  N+V    + ++ PE R +   Q   E VH   +  ++ +   D GE   
Sbjct: 135 FFAASDGIVLENLVERFAQEVTLPEARFFYAFQGAIEGVHQEMYSLLLETYVEDPGEREA 194

Query: 145 LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           L   +  +P + AKA+WA+++T +              +    R L F  
Sbjct: 195 LTRAHDLMPCVKAKADWAMKWTAS-------------DAPYAARLLAFAA 231


>gi|269862698|ref|XP_002650940.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220065381|gb|EED43116.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 332

 Score =  188 bits (477), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 19/176 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L+       + P++Y   WE Y    +  W   EV M  D   +   + LT +E+  
Sbjct: 54  EPLLDEAKKRYVIFPIQYPEIWEFYKMHESTFWTVEEVDMTFDCEHF---STLTPNEQFF 110

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+V      +   E + +   Q   E +HS  +  +I +L  D
Sbjct: 111 IKYVLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAIENIHSEMYSKLIETLIRD 170

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + E   LFN    +PSI  KA WA ++  +              +   TR + F C
Sbjct: 171 KEEQTYLFNAIENIPSIRKKALWAQKWIAS-------------DTSFDTRCVAFAC 213


>gi|269863618|ref|XP_002651286.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220064807|gb|EED42770.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 332

 Score =  187 bits (476), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 19/176 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L+       + P++Y   WE Y    +  W   EV M  D   +   + LT +E+  
Sbjct: 26  EPLLDEAKKRYVIFPIQYPEIWEFYKMHESTFWTVEEVDMTFDCEHF---STLTPNEQFF 82

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+V      +   E + +   Q   E +HS  +  +I +L  D
Sbjct: 83  IKYVLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAIENIHSEMYSKLIETLIRD 142

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + E   LFN    +PSI  KA WA ++  +              +   TR + F C
Sbjct: 143 KEEQTYLFNAIENIPSIRKKALWAQKWIAS-------------DTSFDTRCVAFAC 185


>gi|1710399|sp|P50649|RIR2_PLAFG RecName: Full=Ribonucleoside-diphosphate reductase small subunit;
           AltName: Full=Ribonucleotide reductase R2 subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|349790|gb|AAA29754.1| ribonucleotide reductase R2 subunit [Plasmodium falciparum]
          Length = 322

 Score =  187 bits (475), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 6/153 (3%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           +R+LN  SD   L P+ Y   +  Y  A    W   E+    DL  ++    L ++E+  
Sbjct: 2   RRILNKESDRFTLYPILYPDVFPFYKKAEACFWTAEEIDYSSDLKDFEK---LNENEKHF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+ ++  R +   E +++   Q   E +HS T+  +I +   D
Sbjct: 59  IKHVLAFFAASDGIVLENLAVSFLREVQITEAKKFYSFQIAVENIHSETYSLLIDNYIKD 118

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           E E   LF+    +P++  KA WA ++    +S
Sbjct: 119 EKERLNLFHAIENIPAVKNKALWAAKWINDTNS 151


>gi|256825983|ref|YP_003149943.1| ribonucleotide reductase subunit beta [Kytococcus sedentarius DSM
           20547]
 gi|256689376|gb|ACV07178.1| ribonucleotide reductase, beta subunit [Kytococcus sedentarius DSM
           20547]
          Length = 365

 Score =  187 bits (475), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 53/163 (32%), Positives = 87/163 (53%), Gaps = 6/163 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
            L P++Y   +E +  A  N W   E+ +  DLA   +K  L+  ER ++ R + FFA+ 
Sbjct: 43  TLRPMRYPQFYEMFRDAIKNTWTVEEIDLHSDLADLHNK--LSPAERHLVSRLVAFFATG 100

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY--- 149
           +++VANN+VL +Y H+++PE R YL RQ FEEAVH   +  ++ +   DE E F  +   
Sbjct: 101 DTIVANNLVLNLYEHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYVPDEAERFEAFAAV 160

Query: 150 REVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             +PSI  KA +   +  ++ +       K +R + L   + F
Sbjct: 161 ENIPSIRTKAEFCFTWIDSIENLG-QLETKEQRRQFLLNLICF 202


>gi|328722535|ref|XP_001944897.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
           [Acyrthosiphon pisum]
          Length = 345

 Score =  186 bits (474), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 39/176 (22%), Positives = 67/176 (38%), Gaps = 18/176 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L        + P+ Y   W  Y     + W    V ++ DL  W     +TD+ER  
Sbjct: 38  EPLLKDNPRRFVIFPIIYDNIWAMYKKHEASLWNIEAVNLKSDLEDW---MRMTDEERHF 94

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           I   L F A+S  +V+ N+V    + +   E R +   Q   E +HS  +  +I +   D
Sbjct: 95  ISYILAFLAASNGIVSENLVKRFSQEVQVTEARCFYGFQIMIENIHSEMYSLLIDTYIKD 154

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             E   L N    +P +   A+W L++                ++    R + F  
Sbjct: 155 PKEKETLINATETMPCVKKMADWVLKWI------------TDSKATFGERLVTFAA 198


>gi|90023100|ref|YP_528927.1| amino acid adenylation [Saccharophagus degradans 2-40]
 gi|89952700|gb|ABD82715.1| Class Ia ribonucleoside-diphosphate reductase beta subunit
           [Saccharophagus degradans 2-40]
          Length = 368

 Score =  186 bits (474), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 64/190 (33%), Positives = 105/190 (55%), Gaps = 2/190 (1%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
            G +     +  V   DKR++N  +D+NQL P KY WAW+ +++A  NHW P ++ M  D
Sbjct: 27  AGQAATPNAQAPVCASDKRVINGHTDINQLAPFKYPWAWDFFINANKNHWTPLDINMSQD 86

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           +  +K    LT+ ER M +  L +  +S+ L   NI LA+   ++ PE + Y  RQ +EE
Sbjct: 87  VYDYKH--NLTEAERHMYENVLSYLTTSDILAMRNIGLAVMEKMTAPELQIYQARQVYEE 144

Query: 125 AVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           A+H+ T+Q+ I +LGLD+GE++N YR VP I AK   A +  +++        +  + + 
Sbjct: 145 ALHTWTYQHCIETLGLDQGEIYNRYRVVPEINAKIQMANRRLESILRSDIDLTDPDQLNN 204

Query: 185 ILTRSLRFLC 194
            +   + F  
Sbjct: 205 FILAYIFFAA 214


>gi|58260834|ref|XP_567827.1| ribonucleotide reductase small subunit [Cryptococcus neoformans
           var. neoformans JEC21]
 gi|134117207|ref|XP_772830.1| hypothetical protein CNBK2010 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255448|gb|EAL18183.1| hypothetical protein CNBK2010 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229908|gb|AAW46310.1| ribonucleotide reductase small subunit, putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 430

 Score =  186 bits (474), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 52/175 (29%), Positives = 73/175 (41%), Gaps = 18/175 (10%)

Query: 23  RMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMI 82
            +L        L P+KY   W+ Y  A  + W   E+    DL  W  +  +T+ ER  I
Sbjct: 101 DILRESESRFVLFPIKYNEIWQAYKHAQASFWTAEELDFGHDLIDWHDR--MTEQERFFI 158

Query: 83  KRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE 142
            R L FFA+S+ +V  NIV      +   E R +   Q+  E VHS T+  +I +   D 
Sbjct: 159 LRILAFFAASDGIVGENIVSQFALEVQIAEARAFYSFQSMIEQVHSETYSLLIETYVRDA 218

Query: 143 GE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            E   LF     +P I  KA+WAL+Y                     TR + F C
Sbjct: 219 QEKDFLFRGMTNIPCIKQKADWALKYITDEL-------------PFRTRLVAFAC 260


>gi|126664354|ref|ZP_01735338.1| Ribonucleotide reductase, beta subunit [Marinobacter sp. ELB17]
 gi|126630680|gb|EBA01294.1| Ribonucleotide reductase, beta subunit [Marinobacter sp. ELB17]
          Length = 352

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 67/186 (36%), Positives = 100/186 (53%), Gaps = 2/186 (1%)

Query: 9   PIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
            + +    VNVDDKR++N  +DVNQL P KY WAWE +++A  NHW P +V M  D+  +
Sbjct: 15  ALNSSVAPVNVDDKRVINGNTDVNQLAPFKYPWAWEYFMNANKNHWTPLDVNMSQDVHDY 74

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
             +  L   E+ + +  L +  +S+ L   NI LA+   ++ PE + Y  RQ +EEAVH+
Sbjct: 75  HHR--LNPAEKHVFENVLAYLTTSDILAMRNIGLAVMEKMTAPELQIYQARQVYEEAVHT 132

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
            T+Q+ I +L LD+GE++N YR VP I  K   A +          +  NK      +  
Sbjct: 133 WTYQHCIETLNLDQGEIYNRYRVVPQINGKIQMANRRLNAAMRSDINLRNKDDLQEFIMS 192

Query: 189 SLRFLC 194
            L F  
Sbjct: 193 YLFFAA 198


>gi|162452149|ref|YP_001614516.1| ribonucleotide-diphosphate reductase [Sorangium cellulosum 'So ce
           56']
 gi|161162731|emb|CAN94036.1| Ribonucleotide-diphosphate reductase [Sorangium cellulosum 'So ce
           56']
          Length = 339

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 55/167 (32%), Positives = 86/167 (51%), Gaps = 7/167 (4%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
            L P+ Y   +E Y SA  N W   EV    D+   +    +TD ER +++R + FFA+ 
Sbjct: 18  TLRPMAYPAFFEMYRSAIKNTWTVEEVDFSTDVGDLRK---MTDAERHLVQRLVAFFATG 74

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE---GELFNMY 149
           +S+VANN+VL +YRH++ PE R YL RQ +EEA+H   +  ++ +   D       F   
Sbjct: 75  DSIVANNLVLNLYRHINAPEARMYLSRQLYEEALHVQFYLTLLDTYIPDPEDRHRAFAAV 134

Query: 150 REVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLCRV 196
             +PSI  KA++ +++  ++ S         RR R L   + F   V
Sbjct: 135 ENIPSIRQKADFCMRWLDSVESLGRLDTRAERR-RFLLNLICFAACV 180


>gi|269865568|ref|XP_002651969.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063399|gb|EED42087.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 251

 Score =  186 bits (472), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 19/176 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L+       + P++Y   WE Y    +  W   EV M  D   +   + LT +E+  
Sbjct: 26  EPLLDEAKKRYVIFPIQYPEIWEFYKMHESTFWTVEEVDMTFDCEHF---STLTPNEQFF 82

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+V      +   E + +   Q   E +HS  +  +I +L  D
Sbjct: 83  IKYVLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAIENIHSEMYSKLIETLIRD 142

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + E   LFN    +PSI  KA WA ++  +              +   TR + F C
Sbjct: 143 KEEQTYLFNAIENIPSIRKKALWAQKWIAS-------------DTSFDTRCVAFAC 185


>gi|120556760|ref|YP_961111.1| ribonucleoside-diphosphate reductase [Marinobacter aquaeolei VT8]
 gi|120326609|gb|ABM20924.1| Ribonucleoside-diphosphate reductase [Marinobacter aquaeolei VT8]
          Length = 352

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 66/187 (35%), Positives = 99/187 (52%), Gaps = 2/187 (1%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           +    G   VNVDDKR++N  +D+NQL P KY WAWE +++A  NHW P +V M  D+  
Sbjct: 14  AAATGGPAPVNVDDKRVINGETDINQLAPFKYPWAWEYFMNANKNHWTPLDVNMAQDVHD 73

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           +  +  LT  E+ + +  L +  +S+ L   NI LA+   +S PE + Y  RQ +EEA+H
Sbjct: 74  YHHR--LTPAEKHVYENVLAYLTTSDILAMRNIGLAVMEKMSAPELQIYQARQVYEEALH 131

Query: 128 SHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILT 187
           + T+Q+ I +L LD+ E++N YR VP I  K   A +          +  N       + 
Sbjct: 132 TWTYQHCIETLNLDQSEIYNRYRVVPEINGKIQLANRRLDAAMRSDMNLRNPDELQDFVM 191

Query: 188 RSLRFLC 194
             L F  
Sbjct: 192 SYLFFAA 198


>gi|302536805|ref|ZP_07289147.1| ribonucleoside-diphosphate reductase subunit beta [Streptomyces sp.
           C]
 gi|302445700|gb|EFL17516.1| ribonucleoside-diphosphate reductase subunit beta [Streptomyces sp.
           C]
          Length = 356

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 56/182 (30%), Positives = 89/182 (48%), Gaps = 7/182 (3%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           R +    + L        L P++Y   +E+Y  A  N W   EV +  D+A       LT
Sbjct: 18  RADAPHSKNLLDPGFELTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAK---LT 74

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
             E+ MI R + FFA+ +S+V+NN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++
Sbjct: 75  PAEQHMIGRLVAFFATGDSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLL 134

Query: 136 TSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
            +   D  +    F+   E+PSI  KA +  ++  ++            R R L   + F
Sbjct: 135 DTYLPDPDDRAAAFDAVEEIPSIREKAQFCFKWMDSVEK-IERLETAADRRRFLLNLICF 193

Query: 193 LC 194
             
Sbjct: 194 AA 195


>gi|182436093|ref|YP_001823812.1| putative ribonucleoside-diphosphate reductase small subunit
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|326776718|ref|ZP_08235983.1| Ribonucleoside-diphosphate reductase [Streptomyces cf. griseus
           XylebKG-1]
 gi|178464609|dbj|BAG19129.1| putative ribonucleoside-diphosphate reductase small subunit
           [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|326657051|gb|EGE41897.1| Ribonucleoside-diphosphate reductase [Streptomyces cf. griseus
           XylebKG-1]
          Length = 338

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 56/180 (31%), Positives = 95/180 (52%), Gaps = 8/180 (4%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           + ++K +L+   ++  L P++Y   +E+Y  A  N W   EV +  D+A       L+  
Sbjct: 3   STEEKNLLDPGFEL-TLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAK---LSPG 58

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+ MI R + FFA+ +S+V+NN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ +
Sbjct: 59  EQHMIGRLVAFFATGDSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDT 118

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
              D  +    F+   E+PSI  KA +  ++  ++         K  R R L   + F  
Sbjct: 119 YLPDPDDRAAAFDAVEEIPSIREKAQFCFRWMDSVEKID-RLETKADRRRFLLNLICFAA 177


>gi|312075738|ref|XP_003140550.1| ribonucleotide reductase M2 B [Loa loa]
 gi|307764288|gb|EFO23522.1| ribonucleotide reductase M2 B [Loa loa]
          Length = 350

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 46/192 (23%), Positives = 73/192 (38%), Gaps = 27/192 (14%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
             +G         R   + + +L    +   + P+K+   W+ Y  A  + W   EV + 
Sbjct: 27  PPSGAPERAITTSRCESNGEILLAENPNRFVIFPIKFHDIWDFYKKALASFWTVDEVDLS 86

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D   W++   L D ER  I R L FFA+S+ +V  N+V    + +  PE R +   Q  
Sbjct: 87  KDYRDWEN---LNDGERHFISRVLAFFAASDGIVNENLVNRFSQEVQVPEARFFYGFQIM 143

Query: 123 EEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRR 182
            E VHS     +           FN   E   +  KA+WAL +   + +P          
Sbjct: 144 IENVHSEM-SLL-----------FNAIYEFEFVKKKADWALCWIADIKAP---------- 181

Query: 183 SRILTRSLRFLC 194
                R + F  
Sbjct: 182 --YAERLIAFAA 191


>gi|311696539|gb|ADP99412.1| ribonucleotide-diphosphate reductase beta subunit [marine bacterium
           HP15]
          Length = 352

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 66/193 (34%), Positives = 100/193 (51%), Gaps = 2/193 (1%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
                 +        VNVDDKR++N  +D+NQL P KY WAWE +++A  NHW P +V M
Sbjct: 8   PKTESRAAHPGAPAPVNVDDKRVINGETDINQLAPFKYPWAWEYFMNANKNHWTPLDVNM 67

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D+  +  +  LT  E+ + +  L +  +S+ L   NI LA+   +S PE + Y  RQ 
Sbjct: 68  AQDVHDYHHR--LTAPEKHVYENVLAYLTTSDILAMRNIGLAVMEKMSAPELQIYQARQV 125

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRR 181
           +EEA+H+  +Q+ I +L LD+ E++N YR VP+I  K   A +       P  +  NK  
Sbjct: 126 YEEAMHTWAYQHCIETLNLDQSEIYNRYRVVPAINGKIQIANRRLDAAMRPDMNLRNKDD 185

Query: 182 RSRILTRSLRFLC 194
               +   L F  
Sbjct: 186 LQEFIMSYLFFAA 198


>gi|239944172|ref|ZP_04696109.1| putative ribonucleoside-diphosphate reductase small subunit
           [Streptomyces roseosporus NRRL 15998]
 gi|239990628|ref|ZP_04711292.1| putative ribonucleoside-diphosphate reductase small subunit
           [Streptomyces roseosporus NRRL 11379]
 gi|291447643|ref|ZP_06587033.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           roseosporus NRRL 15998]
 gi|291350590|gb|EFE77494.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           roseosporus NRRL 15998]
          Length = 338

 Score =  185 bits (471), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 57/180 (31%), Positives = 94/180 (52%), Gaps = 8/180 (4%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
             +DK +L+   ++  L P++Y   +E+Y  A  N W   EV +  D+A       L+  
Sbjct: 3   TTEDKNLLDPGFEL-TLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAK---LSPG 58

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+ MI R + FFA+ +S+V+NN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ +
Sbjct: 59  EQHMIGRLVAFFATGDSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDT 118

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
              D  +    F+   E+PSI  KA +  ++  ++         K  R R L   + F  
Sbjct: 119 YLPDPDDRAAAFDAVEEIPSIREKAQFCFKWMDSVEK-IERLETKADRRRFLLNLICFAA 177


>gi|328884923|emb|CCA58162.1| Ribonucleotide reductase of class Ia (aerobic),beta subunit
           [Streptomyces venezuelae ATCC 10712]
          Length = 338

 Score =  185 bits (470), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 56/181 (30%), Positives = 91/181 (50%), Gaps = 7/181 (3%)

Query: 17  VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           ++ +D++ L        L P++Y   +E+Y  A  N W   EV +  D+A       LT 
Sbjct: 1   MSTNDEKNLLDPGFELTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAK---LTP 57

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
            E+ MI R + FFA+ +S+VANN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ 
Sbjct: 58  GEQHMIGRLVAFFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLD 117

Query: 137 SLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           +   D  +    F     +PSI  KA +  ++  ++         +  R R L   + F 
Sbjct: 118 TYLPDPEDRAAAFAAVENIPSIREKAQFCFRWMDSVEKID-RLETQADRRRFLLNLICFA 176

Query: 194 C 194
            
Sbjct: 177 A 177


>gi|329939692|ref|ZP_08288993.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           griseoaurantiacus M045]
 gi|329301262|gb|EGG45157.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           griseoaurantiacus M045]
          Length = 347

 Score =  185 bits (470), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 55/165 (33%), Positives = 84/165 (50%), Gaps = 7/165 (4%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
            L P++Y   +E+Y  A  N W   EV +  D+A       LT  ER +I R + FFA+ 
Sbjct: 26  TLRPMRYPDFYERYRDAIKNTWHVEEVDLHSDVADLAK---LTPAERHLIGRLVAFFATG 82

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMY 149
           +S+VANN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ +   D  +    F   
Sbjct: 83  DSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAAAFAAV 142

Query: 150 REVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             +PSI  KA +  ++  ++           RR R L   + F  
Sbjct: 143 ENIPSIREKAEFCFRWMDSVERLDRLETRSDRR-RFLLNLICFAA 186


>gi|290957506|ref|YP_003488688.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           scabiei 87.22]
 gi|260647032|emb|CBG70131.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           scabiei 87.22]
          Length = 355

 Score =  184 bits (468), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 55/179 (30%), Positives = 94/179 (52%), Gaps = 8/179 (4%)

Query: 19  VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
           + D+ +L+   ++  L P++Y   +E+Y  A  N W   EV +  D+A       L++ E
Sbjct: 21  MTDQNLLDPGFEL-TLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAK---LSEGE 76

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           + MI R + FFA+ +S+VANN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ + 
Sbjct: 77  QHMIGRLVAFFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTY 136

Query: 139 GLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             D  +    F     +PSI  KA +  ++  ++        ++  R R L   + F  
Sbjct: 137 LPDPADRVAAFAAVENIPSIREKAEFCFKWMDSVEKLD-RLESQADRRRFLLNLICFAA 194


>gi|148676854|gb|EDL08801.1| ribonucleotide reductase M2 B (TP53 inducible) [Mus musculus]
          Length = 297

 Score =  184 bits (468), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 10/151 (6%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            Y  A  + W   EV +  DL  W   N L  DE+  I   L FFA+S+ +V  N+V   
Sbjct: 1   MYKQAQASFWTAEEVDLSKDLPHW---NKLKSDEKYFISHILAFFAASDGIVNENLVERF 57

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANW 161
            + +  PE R +   Q   E VHS  +  +I +   D  +   LFN    +P +  KA+W
Sbjct: 58  SQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADW 117

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           AL++     S     + +R  +      + F
Sbjct: 118 ALRWIADRKS----TFGERVVAFAAVEGIFF 144


>gi|310823070|ref|YP_003955428.1| ribonucleoside-diphosphate reductase subunit beta [Stigmatella
           aurantiaca DW4/3-1]
 gi|309396142|gb|ADO73601.1| Ribonucleoside-diphosphate reductase, beta subunit [Stigmatella
           aurantiaca DW4/3-1]
          Length = 336

 Score =  184 bits (468), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 58/174 (33%), Positives = 91/174 (52%), Gaps = 7/174 (4%)

Query: 23  RMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMI 82
            +LNA  ++  L P+ Y   +E Y +A  N W   EV    DL   +SK  +TD ER +I
Sbjct: 1   MLLNAGMNL-TLRPMAYPVFFEMYRNAIKNTWTVEEVDFSTDLVDLRSK--MTDAERHLI 57

Query: 83  KRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE 142
            R + FFA+ +S+V NN+VL +Y+HL+ PE R YL RQ +EEA+H   +  ++ +   D 
Sbjct: 58  HRLVAFFATGDSIVGNNLVLNLYKHLNAPEARMYLSRQLYEEALHVQFYLTLLDTYVPDP 117

Query: 143 G---ELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
               + F     +PSI  KA + L++  ++   +     +  R R L   + F 
Sbjct: 118 ADRAKAFAAIDNIPSIQRKARFCLKWMDSIHDLA-QLKTREDRRRFLLNLICFA 170


>gi|254384639|ref|ZP_04999978.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces sp.
           Mg1]
 gi|194343523|gb|EDX24489.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces sp.
           Mg1]
          Length = 338

 Score =  184 bits (468), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 57/180 (31%), Positives = 93/180 (51%), Gaps = 8/180 (4%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           + D K +L+   ++  L P++Y   +E+Y  A  N W   EV +  D+A       LT  
Sbjct: 3   STDQKNLLDPGFEL-TLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAK---LTPA 58

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+ MI R + FFA+ +S+V+NN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ +
Sbjct: 59  EQHMIGRLVAFFATGDSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDT 118

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
              D  +    F+   E+PSI  KA +  ++   +         +  R R L   + F  
Sbjct: 119 YLPDPDDRAAAFDAVEEIPSIREKAQFCFKWINEVEKLD-RLETQADRRRFLLNLICFAA 177


>gi|224007863|ref|XP_002292891.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220971753|gb|EED90087.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 297

 Score =  184 bits (467), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 10/151 (6%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            Y  A  + W   E+ + +DL  W   + LT +ER  +   L FFA+S+ +V  N+    
Sbjct: 1   MYKKAEASFWTAEEIDLAEDLKDW---DALTANERHFVSHILAFFAASDGIVNENLTGNF 57

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANW 161
              +++PE R +   Q   E +HS T+  +I +   D  E   L N    VP +  KA+W
Sbjct: 58  STEVTSPEARCFYGFQIAVENIHSETYSLLIDTYIKDSTEKNHLLNAIETVPCVQKKAHW 117

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           AL++    ++     + +R  +      + F
Sbjct: 118 ALKWCDAGNA----SFAERMIAFAAVEGIFF 144


>gi|282861024|ref|ZP_06270089.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. ACTE]
 gi|282563682|gb|EFB69219.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. ACTE]
          Length = 340

 Score =  184 bits (467), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 53/165 (32%), Positives = 86/165 (52%), Gaps = 7/165 (4%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
            L P++Y   +E+Y  A  N W   EV +  D+A       L+  E+ MI R + FFA+ 
Sbjct: 19  TLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAK---LSPGEQHMIGRLVAFFATG 75

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMY 149
           +S+V+NN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ +   D  +    F+  
Sbjct: 76  DSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRAAAFDAV 135

Query: 150 REVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            E+PSI  KA +  ++  ++         +  R R L   + F  
Sbjct: 136 EEIPSIREKAQFCFKWMDSVEEID-RLETQADRRRFLLNLICFAA 179


>gi|313844096|ref|YP_004061759.1| hypothetical protein OlV1_126 [Ostreococcus lucimarinus virus OlV1]
 gi|312599481|gb|ADQ91503.1| hypothetical protein OlV1_126 [Ostreococcus lucimarinus virus OlV1]
          Length = 408

 Score =  184 bits (467), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 53/181 (29%), Positives = 77/181 (42%), Gaps = 18/181 (9%)

Query: 17  VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           V  + + +L    +   + PLKY   WE Y  A  ++W   EV +  DL  WK+   L +
Sbjct: 88  VEEEYEPLLAPTLNRFTVFPLKYPHLWELYKKAQMSNWTAEEVDLSKDLDDWKT---LNE 144

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
           +E+  IK  L FFA S+ +V  NI       + + E R +   Q   E VH  T+  +I 
Sbjct: 145 NEKKFIKYILAFFAGSDGIVFENINNNFADEVQSSEARSFYAYQCHNEMVHGETYSKLID 204

Query: 137 SLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
               D  E   LF   + VP I  KA+WA+++  T S                 R   F 
Sbjct: 205 KYIKDGAEKKQLFEAIQTVPCIQKKADWAMKWFDTKS------------RSFAERLFAFA 252

Query: 194 C 194
           C
Sbjct: 253 C 253


>gi|11544904|emb|CAC17630.1| class I ribonucleotide-diphosphate reductase small subunit chain
           [Streptomyces jumonjinensis]
          Length = 322

 Score =  184 bits (467), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 7/165 (4%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
            L P++Y   +E+Y  A  N W   EV +  D+        LT  E+ +I R + FFA+ 
Sbjct: 18  TLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVTDLAK---LTPGEQHLIGRLVAFFATG 74

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMY 149
           +S+VANN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ +   D  +    F   
Sbjct: 75  DSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRTAAFAAV 134

Query: 150 REVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             +PSI  KA +  ++  ++         +  R R L   + F  
Sbjct: 135 ENIPSIREKAQFCFKWMDSVEKID-QLETQADRRRFLLNLICFAA 178


>gi|256391238|ref|YP_003112802.1| ribonucleoside-diphosphate reductase [Catenulispora acidiphila DSM
           44928]
 gi|256357464|gb|ACU70961.1| Ribonucleoside-diphosphate reductase [Catenulispora acidiphila DSM
           44928]
          Length = 331

 Score =  183 bits (466), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 53/165 (32%), Positives = 87/165 (52%), Gaps = 7/165 (4%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
            L P++Y   +++Y  A  N W   EV +  DL      + L+  ER ++ R + FFA+ 
Sbjct: 10  TLRPMRYPHFFDRYRDAIKNTWTVEEVDLHSDLTD---LDRLSAAERHLVSRLVAFFATG 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMY 149
           +++VANN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ +   DE E    F   
Sbjct: 67  DTIVANNLVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPDEDERTEAFAAV 126

Query: 150 REVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             +PSI  KA +  ++  +L +       + RR+  L   + F  
Sbjct: 127 ENIPSIRRKAEFCFRWIDSLGNLQRLESREDRRA-FLLNLICFAA 170


>gi|297157411|gb|ADI07123.1| ribonucleoside-diphosphate reductase [Streptomyces bingchenggensis
           BCW-1]
          Length = 340

 Score =  183 bits (466), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 52/165 (31%), Positives = 84/165 (50%), Gaps = 7/165 (4%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
            L P++Y   +++Y  A  N W   EV +  D+A       L+  E+ +I R + FFA+ 
Sbjct: 19  TLRPMRYPDFYDRYRDAIKNTWTVEEVDLHSDVADLAK---LSPGEQHLIGRLVAFFATG 75

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMY 149
           +S+VANN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ +   D  +    F   
Sbjct: 76  DSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAAAFAAV 135

Query: 150 REVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             +PSI  KA +  ++  ++         K  R R L   + F  
Sbjct: 136 ENIPSIREKAEFCFRWIDSVDKID-RLETKDERRRFLLNLICFAA 179


>gi|308485547|ref|XP_003104972.1| hypothetical protein CRE_24501 [Caenorhabditis remanei]
 gi|308257293|gb|EFP01246.1| hypothetical protein CRE_24501 [Caenorhabditis remanei]
          Length = 323

 Score =  183 bits (466), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 18/176 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L        + P+++   W  Y  A  + W   EV +  D+A W+    L+ DE+  
Sbjct: 4   EPLLVESGIRFVIYPIEHHDIWSFYKKALASFWTTEEVDVGKDMADWE---RLSADEKKF 60

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           I   L FFA+S+ +V  N+       +   E R +   Q   E +HS T+  +I +   D
Sbjct: 61  ISTVLAFFAASDGIVVENLCSRFANEVKIVEARFFYGFQIAVENIHSETYAKLIETYIKD 120

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           E E   LF+  +    I  KA+WAL++   ++SP               R + F  
Sbjct: 121 ERERLVLFDAIKNFEFIKKKADWALRWISDMTSP------------FAHRLVAFAA 164


>gi|254449372|ref|ZP_05062814.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium HTCC5015]
 gi|198261018|gb|EDY85321.1| ribonucleoside-diphosphate reductase, beta subunit [gamma
           proteobacterium HTCC5015]
          Length = 404

 Score =  183 bits (466), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 66/193 (34%), Positives = 106/193 (54%), Gaps = 2/193 (1%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           +   T  + +  G   V  +DK+++N  +D+NQL P KY WAWE +L+A  NHW P ++ 
Sbjct: 59  IPEQTNAAQMSGGVNPVKAEDKKVVNGMADINQLAPFKYPWAWEYFLNANKNHWTPLDIN 118

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+  +  K  LT +ER +    L +  +S+ +   NI LA+   +S PE + Y  RQ
Sbjct: 119 MAQDVHDFHHK--LTLEERHVYTNVLSYLTTSDIMAMRNIGLAVMEKMSAPELQIYQARQ 176

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
            +EE++H+ T+Q+ I +LGLD+GE++N YR VP I AK   A +   ++  P     ++ 
Sbjct: 177 VYEESLHTWTYQHCIETLGLDQGEVYNRYRVVPEINAKIQIANRRLNSVMRPDIDLNDRD 236

Query: 181 RRSRILTRSLRFL 193
                L   + F 
Sbjct: 237 ELHNFLMSYIFFA 249


>gi|320008647|gb|ADW03497.1| Ribonucleoside-diphosphate reductase [Streptomyces flavogriseus
           ATCC 33331]
          Length = 338

 Score =  183 bits (466), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 56/178 (31%), Positives = 94/178 (52%), Gaps = 8/178 (4%)

Query: 20  DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER 79
           ++K +L+   ++  L P++Y   +E+Y  A  N W   EV +  D+A       L+  E+
Sbjct: 5   ENKNLLDPGFEL-TLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAK---LSPGEQ 60

Query: 80  LMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
            MI R + FFA+ +S+V+NN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ +  
Sbjct: 61  HMIGRLVAFFATGDSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYL 120

Query: 140 LDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            D  +    F+   E+PSI  KA +  ++  ++         K  R R L   + F  
Sbjct: 121 PDPEDRAAAFDAVEEIPSIREKAQFCFRWMDSVEK-IERLETKADRRRFLLNLICFAA 177


>gi|314055235|ref|YP_004063573.1| ribonucleoside-diphosphate reductase small subunit-possible host
           origin [Ostreococcus tauri virus 2]
 gi|313575126|emb|CBI70139.1| ribonucleoside-diphosphate reductase small subunit-possible host
           origin [Ostreococcus tauri virus 2]
          Length = 408

 Score =  183 bits (466), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 52/181 (28%), Positives = 76/181 (41%), Gaps = 18/181 (9%)

Query: 17  VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           V  + + +L    +   + PLKY   WE Y  A  ++W   EV +  DL  WK+   L +
Sbjct: 88  VGEEYEPILAPTLNRFTVFPLKYPQLWELYKKAQMSNWTAEEVDLSKDLDDWKT---LNE 144

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
           +E+  IK  L FFA S+ +V  NI       +   E R +   Q   E VH  T+  +I 
Sbjct: 145 NEKKFIKYILAFFAGSDGIVFENINNNFADEVQISEARSFYAYQCHNEMVHGETYSKLID 204

Query: 137 SLGLD---EGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
               D   + +LF   + VP I  KA WA+++  T S                 R   F 
Sbjct: 205 KYIKDGSEKKQLFEAIQTVPCIEKKAKWAMKWFDTKS------------RSFAERLFAFA 252

Query: 194 C 194
           C
Sbjct: 253 C 253


>gi|300709535|ref|YP_003735349.1| ribonucleotide-diphosphate reductase subunit beta [Halalkalicoccus
           jeotgali B3]
 gi|299123218|gb|ADJ13557.1| ribonucleotide-diphosphate reductase subunit beta [Halalkalicoccus
           jeotgali B3]
          Length = 330

 Score =  183 bits (466), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 74/167 (44%), Positives = 106/167 (63%), Gaps = 1/167 (0%)

Query: 27  ARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNL 86
           +  D N++LP+ Y WA E Y +   N+W P EVPM DD+  W++ + L+ +ER +++ NL
Sbjct: 8   SHHDPNKILPIDYDWAREYYKAGVANNWTPEEVPMADDVHQWEN-DELSSEERQLVEWNL 66

Query: 87  GFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELF 146
           GFF+++ESL ANNIVLA+Y H++ PECRQYLLRQA+EEA+H+ TF Y   SLG D   L+
Sbjct: 67  GFFSTAESLTANNIVLAVYDHVTAPECRQYLLRQAYEEAIHTDTFIYCCDSLGFDPEYLY 126

Query: 147 NMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            MY  +P+I AK  + +  TQ +  P F   +       L   + F 
Sbjct: 127 GMYDRIPAIEAKDEFVVDLTQVIDDPDFEISSDEDVREFLRDLVGFY 173


>gi|9632043|ref|NP_048832.1| hypothetical protein PBCV1_A476R [Paramecium bursaria Chlorella
           virus 1]
 gi|1620147|gb|AAC96843.1| contains ribonucleotide reductase (RR) signature; similar to
           tobacco RR small subunit, corresponds to Swiss-Prot
           Accession Number P49730 [Paramecium bursaria Chlorella
           virus 1]
          Length = 324

 Score =  183 bits (466), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 6/153 (3%)

Query: 19  VDDKRMLNARSDV-NQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
            + + +L           P++Y   W+ Y  A    W   EVP+  D+  W+ K  L DD
Sbjct: 2   ANQEPILADNGSRKFSAFPIQYPDMWDMYKKAVATFWTTEEVPLNADVVDWREK--LNDD 59

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           ER  IK  LGFFA S+ +V  N+       ++ PE RQ+   Q F E++HS  +  +I +
Sbjct: 60  ERHFIKHILGFFAGSDGIVMENLQTNFSVEVTVPEARQFYAYQTFNESIHSEQYALLIDA 119

Query: 138 LGLDE---GELFNMYREVPSITAKANWALQYTQ 167
           L  DE    ELF+    +P++  KA WA ++ +
Sbjct: 120 LISDEQERNELFDAIENIPAVHNKAKWAQKWLE 152


>gi|297192180|ref|ZP_06909578.1| ribonucleoside-diphosphate reductase subunit beta protein
           [Streptomyces pristinaespiralis ATCC 25486]
 gi|197720175|gb|EDY64083.1| ribonucleoside-diphosphate reductase subunit beta protein
           [Streptomyces pristinaespiralis ATCC 25486]
          Length = 340

 Score =  183 bits (466), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 54/165 (32%), Positives = 86/165 (52%), Gaps = 7/165 (4%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
            L P++Y   +E+Y  A  N W   EV +  D+A       L+  E+ MI R + FFA+ 
Sbjct: 19  TLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAK---LSPGEQHMIGRLVAFFATG 75

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMY 149
           +S+VANN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ +   D  +    F   
Sbjct: 76  DSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRTAAFAAV 135

Query: 150 REVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             +PSI  KA++  ++  ++ S       +  R R L   + F  
Sbjct: 136 ENIPSIREKASFCFKWMDSVESID-RLETQADRRRFLLNLICFAA 179


>gi|159040364|ref|YP_001539617.1| ribonucleoside-diphosphate reductase [Salinispora arenicola
           CNS-205]
 gi|157919199|gb|ABW00627.1| Ribonucleoside-diphosphate reductase [Salinispora arenicola
           CNS-205]
          Length = 350

 Score =  183 bits (466), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 14/196 (7%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           A    ++    GE+ + +D    L        L P++Y   ++++  A  N W   EV +
Sbjct: 5   AETRTVTAATTGERHMLLDPGMDL-------TLRPMRYPHFFDRFKEAIKNTWTVEEVDL 57

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             DLA       L+  ER ++ R + FFA+ +++VANN+VL +Y+H+++PE R YL RQ 
Sbjct: 58  HSDLADLAK---LSPAERHLVSRLVAFFATGDTIVANNLVLNLYQHVNSPEGRLYLSRQL 114

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMY---REVPSITAKANWALQYTQTLSSPSFHYWN 178
           FEEAVH   +  ++ +   DE E F  +     +PSI  KA +  ++  ++         
Sbjct: 115 FEEAVHVQFYLNLLDTYVPDEKERFAAFAAVENIPSIARKAEFCFRWIDSIFE-LRELRT 173

Query: 179 KRRRSRILTRSLRFLC 194
           +  R   L   + F  
Sbjct: 174 RADRRAFLLNLICFAA 189


>gi|290343623|ref|YP_003494990.1| hypothetical protein OTV1_151 [Ostreococcus tauri virus 1]
 gi|260161038|emb|CAY39739.1| hypothetical protein OTV1_151 [Ostreococcus tauri virus 1]
          Length = 389

 Score =  183 bits (466), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 53/181 (29%), Positives = 76/181 (41%), Gaps = 18/181 (9%)

Query: 17  VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           V  + + +L +  +   + PLKY   WE Y  A  ++W   EV +  DL  WK+   L +
Sbjct: 69  VEEEYEPILASTLNRFTVFPLKYPHLWELYKKAQMSNWTAEEVDLSKDLDDWKT---LNE 125

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
           +E+  IK  L FFA S+ +V  NI       +   E R +   Q   E VH  T+  +I 
Sbjct: 126 NEQKFIKYILAFFAGSDGIVFENINNNFADEVQISEARSFYAYQCHNEMVHGETYSKLID 185

Query: 137 SLGLDE---GELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
               D     ELF   + VP I  KA WA+++  T S                 R   F 
Sbjct: 186 KYIKDPSEKKELFEAIQTVPCIEKKAQWAMKWFDTKS------------RSFAERLFAFA 233

Query: 194 C 194
           C
Sbjct: 234 C 234


>gi|254388985|ref|ZP_05004216.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           clavuligerus ATCC 27064]
 gi|294814921|ref|ZP_06773564.1| Ribonucleoside-diphosphate reductase beta chain protein
           [Streptomyces clavuligerus ATCC 27064]
 gi|326443293|ref|ZP_08218027.1| Ribonucleoside-diphosphate reductase [Streptomyces clavuligerus
           ATCC 27064]
 gi|197702703|gb|EDY48515.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           clavuligerus ATCC 27064]
 gi|218078699|emb|CAB90708.3| class Ia ribonucleotide-diphosphate reductase small subunit chain
           [Streptomyces clavuligerus ATCC 27064]
 gi|294327520|gb|EFG09163.1| Ribonucleoside-diphosphate reductase beta chain protein
           [Streptomyces clavuligerus ATCC 27064]
          Length = 339

 Score =  183 bits (466), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 7/165 (4%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
            L P++Y   +E+Y  A  N W   EV +  D+        L+  E+ +I R + FFA+ 
Sbjct: 18  TLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVPDLAK---LSPGEQHLIGRLVAFFATG 74

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMY 149
           +S+VANN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ +   D  +    F   
Sbjct: 75  DSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRNAAFAAV 134

Query: 150 REVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             +PSI  KA +  ++  ++         +  R R L   + F  
Sbjct: 135 ENIPSIREKAQFCFRWMDSVEKLD-QLETQADRRRFLLNLICFAA 178


>gi|50949848|emb|CAH10473.1| hypothetical protein [Homo sapiens]
          Length = 297

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 10/151 (6%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            Y  A  + W   EV +  DL  W   N L  DE+  I   L FFA+S+ +V  N+V   
Sbjct: 1   MYKQAQASFWTAEEVDLSKDLPHW---NKLKADEKYFISHILAFFAASDGIVNENLVERF 57

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANW 161
            + +  PE R +   Q   E VHS  +  +I +   D  +   LFN    +P +  KA+W
Sbjct: 58  SQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADW 117

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           AL++     S     + +R  +      + F
Sbjct: 118 ALRWIADRKS----TFGERVVAFAAVEGVFF 144


>gi|114621164|ref|XP_001153859.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
 gi|119612248|gb|EAW91842.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_c [Homo
           sapiens]
 gi|194385642|dbj|BAG65196.1| unnamed protein product [Homo sapiens]
          Length = 297

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 10/151 (6%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            Y  A  + W   EV +  DL  W   N L  DE+  I   L FFA+S+ +V  N+V   
Sbjct: 1   MYKQAQASFWTAEEVDLSKDLPHW---NKLKADEKYFISHILAFFAASDGIVNENLVERF 57

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANW 161
            + +  PE R +   Q   E VHS  +  +I +   D  +   LFN    +P +  KA+W
Sbjct: 58  SQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADW 117

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           AL++     S     + +R  +      + F
Sbjct: 118 ALRWIADRKS----TFGERVVAFAAVEGVFF 144


>gi|295836584|ref|ZP_06823517.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. SPB74]
 gi|197697282|gb|EDY44215.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. SPB74]
          Length = 345

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 54/165 (32%), Positives = 85/165 (51%), Gaps = 7/165 (4%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
            L P++Y   +E+Y +A  N W   EV +  D+A       LT  E+ +I R + FFA+ 
Sbjct: 24  TLRPMRYPDFYERYRNAIKNTWTVEEVDLHSDVADLAK---LTPGEQHLIGRLVAFFATG 80

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMY 149
           +S+VANN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ +   D  +    F   
Sbjct: 81  DSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRADAFAAV 140

Query: 150 REVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             +PSI  KA +  ++   +        +K  R R L   + F  
Sbjct: 141 ENIPSIREKAEFCFKWIDEVEKID-RLESKADRRRFLLNLICFAA 184


>gi|239929012|ref|ZP_04685965.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           ghanaensis ATCC 14672]
          Length = 339

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 7/165 (4%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
            L P++Y   +E+Y  A  N W   EV +  D+A       L+  E+ +I R + FFA+ 
Sbjct: 18  TLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAK---LSPAEQHLIGRLVAFFATG 74

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMY 149
           +S+VANN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ +   D  +    F   
Sbjct: 75  DSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAAAFAAV 134

Query: 150 REVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             +PSI  KA +   +  ++         +  R R L   + F  
Sbjct: 135 ENIPSIREKAEFCFTWMDSVEKLD-RLQTQADRRRFLLNLICFAA 178


>gi|302554045|ref|ZP_07306387.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           viridochromogenes DSM 40736]
 gi|302471663|gb|EFL34756.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           viridochromogenes DSM 40736]
          Length = 341

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 52/165 (31%), Positives = 85/165 (51%), Gaps = 7/165 (4%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
            L P++Y   +E+Y  A  N W   EV +  D+A       L+  E+ +I R + FFA+ 
Sbjct: 20  TLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAK---LSPAEQHLIGRLVAFFATG 76

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMY 149
           +S+VANN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ +   D  +    F   
Sbjct: 77  DSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRTAAFAAV 136

Query: 150 REVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             +PSI  KA++  ++  ++         +  R R L   + F  
Sbjct: 137 ENIPSIREKASFCFKWMDSVEKLD-RLETQADRRRFLLNLICFAA 180


>gi|157953769|ref|YP_001498660.1| hypothetical protein AR158_C579R [Paramecium bursaria Chlorella
           virus AR158]
 gi|156068417|gb|ABU44124.1| hypothetical protein AR158_C579R [Paramecium bursaria Chlorella
           virus AR158]
          Length = 324

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 49/150 (32%), Positives = 76/150 (50%), Gaps = 6/150 (4%)

Query: 22  KRMLNARSDV-NQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           + +L+          P++Y   W+ Y  A    W   EVP+  D+  W+ K  L DDER 
Sbjct: 5   EPILSDNGSRKFSAFPIQYPDMWDMYKKAVATFWTTEEVPLNADVVDWREK--LNDDERH 62

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            IK  LGFFA S+ +V  N+       ++ PE RQ+   Q F E++HS  +  +I +L  
Sbjct: 63  FIKHILGFFAGSDGIVMENLQTNFSVEVTVPEARQFYAYQTFNESIHSEQYALLIDALIS 122

Query: 141 DE---GELFNMYREVPSITAKANWALQYTQ 167
           DE    ELF+    +P++  KA WA ++ +
Sbjct: 123 DEQERNELFDAIENIPAVHNKAKWAQKWLE 152


>gi|29829569|ref|NP_824203.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
           avermitilis MA-4680]
 gi|29606677|dbj|BAC70738.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptomyces avermitilis MA-4680]
          Length = 338

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 56/181 (30%), Positives = 92/181 (50%), Gaps = 8/181 (4%)

Query: 17  VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           ++ + K +L+   ++  L P++Y   +E+Y  A  N W   EV +  D+A       LT 
Sbjct: 2   MSSETKNLLDPGFEL-TLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAK---LTP 57

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
            E+ +I R + FFA+ +S+VANN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ 
Sbjct: 58  AEQHLIGRLVAFFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLD 117

Query: 137 SLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           +   D  +    F     +PSI  KA +  ++   +         K  R R L   + F 
Sbjct: 118 TYLPDPEDRTAAFAAVENIPSIREKAEFCFKWINEVEKLD-RLETKADRRRFLLNLICFA 176

Query: 194 C 194
            
Sbjct: 177 A 177


>gi|291437353|ref|ZP_06576743.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           ghanaensis ATCC 14672]
 gi|291340248|gb|EFE67204.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           ghanaensis ATCC 14672]
          Length = 340

 Score =  183 bits (465), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 52/165 (31%), Positives = 83/165 (50%), Gaps = 7/165 (4%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
            L P++Y   +E+Y  A  N W   EV +  D+A       L+  E+ +I R + FFA+ 
Sbjct: 19  TLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAK---LSPAEQHLIGRLVAFFATG 75

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMY 149
           +S+VANN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ +   D  +    F   
Sbjct: 76  DSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAAAFAAV 135

Query: 150 REVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             +PSI  KA +   +  ++         +  R R L   + F  
Sbjct: 136 ENIPSIREKAEFCFTWMDSVEKLD-RLQTQADRRRFLLNLICFAA 179


>gi|291303011|ref|YP_003514289.1| Ribonucleoside-diphosphate reductase [Stackebrandtia nassauensis
           DSM 44728]
 gi|290572231|gb|ADD45196.1| Ribonucleoside-diphosphate reductase [Stackebrandtia nassauensis
           DSM 44728]
          Length = 338

 Score =  183 bits (464), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 54/175 (30%), Positives = 88/175 (50%), Gaps = 8/175 (4%)

Query: 23  RMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMI 82
           R+L+   D+  L P++Y   +E++ +A  N W   EV +  DL    +    TD ER +I
Sbjct: 8   RLLDPGMDL-TLRPMRYPDFYEQFRAAIRNTWTVEEVDLASDLPDLATF---TDSERHLI 63

Query: 83  KRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE 142
            R + FFA+ +++VANN+VL +Y+H++ PE R YL RQ +EEAVH   +  ++ +   D 
Sbjct: 64  NRLVAFFATGDTIVANNLVLNLYKHVNAPEARLYLSRQLYEEAVHVQFYLTLLDTYLPDP 123

Query: 143 G---ELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
               + F     +PSI  KA +  ++  T+            R   L   + F  
Sbjct: 124 EDRVKAFAAVEHIPSIKEKAEFCFKWIDTIDQLD-ELRTPEDRRAFLLNLICFAA 177


>gi|239982206|ref|ZP_04704730.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           albus J1074]
 gi|291454052|ref|ZP_06593442.1| ribonucleotide-diphosphate reductase subunit small [Streptomyces
           albus J1074]
 gi|291357001|gb|EFE83903.1| ribonucleotide-diphosphate reductase subunit small [Streptomyces
           albus J1074]
          Length = 350

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 51/165 (30%), Positives = 85/165 (51%), Gaps = 7/165 (4%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
            L P++Y   +E+Y  A  N W   EV +  D+A       L+  E+ +I R + FFA+ 
Sbjct: 29  TLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAK---LSPGEQHLIGRLVAFFATG 85

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMY 149
           +S+VANN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ +   D  +    F   
Sbjct: 86  DSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPADRADAFAAV 145

Query: 150 REVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             +PSI  KA +  ++  ++        ++  R + L   + F  
Sbjct: 146 ENIPSIREKAEFCFRWMDSVDKLD-QLESQADRRKFLLNLICFAA 189


>gi|322510501|gb|ADX05815.1| putative ribonucleotide reductase small subunit [Organic Lake
           phycodnavirus 1]
          Length = 324

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 47/177 (26%), Positives = 73/177 (41%), Gaps = 18/177 (10%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L    +   + P+     W+ Y    +  W   E+    DL  W   N L  +E+ 
Sbjct: 6   NEPLLTEDDNRFVMFPIVDEAIWKMYKKQVDCFWRAEEIDTSKDLNHW---NKLQPEEQY 62

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            IK  L FFASS+ +V  N+ L     +   E R +   Q   E +HS T+  +I S   
Sbjct: 63  YIKMILAFFASSDGIVLENLGLRFMNEVQLSEARAFYGFQIAMENIHSETYSLLIDSYIK 122

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           DE E   LF+     P I  K  WA+++               ++S   TR + F C
Sbjct: 123 DENEKNKLFHSLEHFPCIEKKGKWAMKWIN------------DKKSNFSTRLVAFAC 167


>gi|307328555|ref|ZP_07607729.1| Ribonucleoside-diphosphate reductase [Streptomyces violaceusniger
           Tu 4113]
 gi|306885823|gb|EFN16835.1| Ribonucleoside-diphosphate reductase [Streptomyces violaceusniger
           Tu 4113]
          Length = 340

 Score =  182 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 53/182 (29%), Positives = 89/182 (48%), Gaps = 7/182 (3%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
            V + D + L        L P++Y   +++Y  A  N W   EV +  D+        L+
Sbjct: 2   PVTMSDTKNLLDPGFELTLRPMRYPEFYDRYRDAIKNTWTVEEVDLHSDVTDLAK---LS 58

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
             E+ +I R + FFA+ +S+V+NN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++
Sbjct: 59  PGEQHLIGRLVAFFATGDSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLL 118

Query: 136 TSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
            +   D  +    F     +PSI  KA +  ++  ++         K+ R R L   + F
Sbjct: 119 DTYLPDPDDRAAAFAAVENIPSIREKAEFCFRWMDSVEKID-RLETKQDRRRFLLNLICF 177

Query: 193 LC 194
             
Sbjct: 178 AA 179


>gi|155370749|ref|YP_001426283.1| hypothetical protein FR483_N651L [Paramecium bursaria Chlorella
           virus FR483]
 gi|155124069|gb|ABT15936.1| hypothetical protein FR483_N651L [Paramecium bursaria Chlorella
           virus FR483]
          Length = 348

 Score =  182 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 48/163 (29%), Positives = 77/163 (47%), Gaps = 18/163 (11%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
            P+KY   +  Y  A +  W   EVP+  D+A W+ K  L DDER  IK  LGFFA S+ 
Sbjct: 43  FPIKYPDVFAMYKKAVSTFWTVEEVPLNQDIADWRDK--LNDDERHFIKTILGFFAGSDG 100

Query: 95  LVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYRE 151
           +V  NI       +++P  R +   Q F E++HS  +  ++ +L  D+ E   LF+    
Sbjct: 101 MVMENIANNFSTEVTDPSARLFYAYQMFNESIHSEMYSLLLDALIEDDAERNSLFDAIET 160

Query: 152 VPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           +P++  KA WA ++               +      R + ++C
Sbjct: 161 IPAVGKKAAWAQKFLS-------------QDKSFAERLVAWVC 190


>gi|149375674|ref|ZP_01893443.1| Ribonucleotide reductase, beta subunit [Marinobacter algicola
           DG893]
 gi|149360076|gb|EDM48531.1| Ribonucleotide reductase, beta subunit [Marinobacter algicola
           DG893]
          Length = 352

 Score =  182 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 67/193 (34%), Positives = 102/193 (52%), Gaps = 3/193 (1%)

Query: 3   NNTGLSPIQ-AGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
            NT   P    G   VNVDDKR++N  +D+NQL P KY WAWE +++A  NHW P +V M
Sbjct: 8   PNTQTRPAAHEGPAPVNVDDKRVINGETDINQLAPFKYPWAWEYFMNANKNHWTPLDVNM 67

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D+  +  +  L+  E+ + +  L +  +S+ L   NI LA+   +S PE + Y  RQ 
Sbjct: 68  AQDVHDYHHR--LSAPEKHVYENVLAYLTTSDILAMRNIGLAVMEKMSAPELQIYQARQV 125

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRR 181
           +EEA+H+  +Q+ I +L LD+ E++N YR VP+I  K   A +          +  +K  
Sbjct: 126 YEEAMHTWAYQHCIETLNLDQSEIYNRYRVVPAINGKIQMANRRLDAAMRSDMNLRDKDD 185

Query: 182 RSRILTRSLRFLC 194
               +   L F  
Sbjct: 186 LQEFIMSYLFFAA 198


>gi|318060206|ref|ZP_07978929.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. SA3_actG]
 gi|318077113|ref|ZP_07984445.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. SA3_actF]
          Length = 345

 Score =  182 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 53/165 (32%), Positives = 84/165 (50%), Gaps = 7/165 (4%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
            L P++Y   +E+Y  A  N W   EV +  D++       LT  E+ +I R + FFA+ 
Sbjct: 24  TLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVSDLAK---LTPGEQHLIGRLVAFFATG 80

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMY 149
           +S+V+NN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ +   D  +    F   
Sbjct: 81  DSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAAAFAAV 140

Query: 150 REVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             +PSI AKA +  ++   +           RR R L   + F  
Sbjct: 141 ENIPSIRAKAEFCFKWIDEVEKIDRLESRSDRR-RFLLNLICFAA 184


>gi|302558498|ref|ZP_07310840.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           griseoflavus Tu4000]
 gi|302476116|gb|EFL39209.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           griseoflavus Tu4000]
          Length = 341

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 52/165 (31%), Positives = 85/165 (51%), Gaps = 7/165 (4%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
            L P++Y   +E+Y  A  N W   EV +  D+A       L+ +E+ +I R + FFA+ 
Sbjct: 20  TLRPMRYPDFYERYRDAIKNTWHVEEVDLHSDVADLAK---LSPEEQHLIGRLVAFFATG 76

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMY 149
           +S+VANN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ +   D  +    F   
Sbjct: 77  DSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAAAFAAV 136

Query: 150 REVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             +PSI  KA +  ++  ++         +  R R L   + F  
Sbjct: 137 ENIPSIREKAEFCFRWMDSVEKLD-RLETQADRRRFLLNLICFAA 180


>gi|149916691|ref|ZP_01905193.1| putative ribonucleoside-diphosphate reductase beta chain
           [Plesiocystis pacifica SIR-1]
 gi|149822408|gb|EDM81797.1| putative ribonucleoside-diphosphate reductase beta chain
           [Plesiocystis pacifica SIR-1]
          Length = 356

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 57/184 (30%), Positives = 90/184 (48%), Gaps = 7/184 (3%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
              V     R+L+  + +  L P+ Y   + +Y  A  N W   EV    DL     + G
Sbjct: 16  TADVIARPPRLLDPGTCL-TLRPMAYPDFYAQYRQAIRNTWTVEEVDFSTDLRDLAERMG 74

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
               ER +I+R + FFA+ +S+VANN+VL++YRHL+ PE R YL RQ +EEA+H   +  
Sbjct: 75  --PAERHLIQRLVAFFATGDSIVANNLVLSLYRHLNAPEARMYLSRQLYEEALHVQFYLT 132

Query: 134 IITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSL 190
           ++ +   D  +    F     +PSI  KA + L++  T+++         RR   L   +
Sbjct: 133 LLDTYVPDPDQRHAAFAAVETIPSIRRKAEFCLRWQDTVAAIPRLDGPAHRRQ-FLLNLI 191

Query: 191 RFLC 194
            F  
Sbjct: 192 CFAA 195


>gi|269867180|ref|XP_002652512.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220062330|gb|EED41544.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 196

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 6/153 (3%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L+       + P++Y   WE Y    +  W   EV M  D   +   + LT +E+  
Sbjct: 26  EPLLDEAKKRYVIFPIQYPEIWEFYKMHESTFWTVEEVDMTFDCEHF---STLTPNEQFF 82

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+V      +   E + +   Q   E +HS  +  +I +L  D
Sbjct: 83  IKYVLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAIENIHSEMYSKLIETLIRD 142

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSS 171
           + E   LFN    +PSI  KA WA ++  + +S
Sbjct: 143 KEEQTYLFNAIENIPSIRKKALWAQKWIASDTS 175


>gi|302521843|ref|ZP_07274185.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. SPB78]
 gi|302430738|gb|EFL02554.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. SPB78]
          Length = 345

 Score =  182 bits (462), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 53/165 (32%), Positives = 84/165 (50%), Gaps = 7/165 (4%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
            L P++Y   +E+Y  A  N W   EV +  D++       LT  E+ +I R + FFA+ 
Sbjct: 24  TLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVSDLAK---LTPGEQHLIGRLVAFFATG 80

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMY 149
           +S+V+NN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ +   D  +    F   
Sbjct: 81  DSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAAAFAAV 140

Query: 150 REVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             +PSI AKA +  ++   +           RR R L   + F  
Sbjct: 141 ENIPSIRAKAEFCFKWIDEVEKIDRLESQSDRR-RFLLNLICFAA 184


>gi|227541|prf||1706181A ribonucleotide reductase
          Length = 290

 Score =  182 bits (462), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 10/144 (6%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           + W   EV +  D+  W+S   L  +ER  I   L FFA+S+ +V  N+V    + +   
Sbjct: 1   SFWTAEEVDLSKDIQHWES---LKPEERYFISHVLAFFAASDGIVNENLVERFSQEVQIT 57

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQT 168
           E R +   Q   E +HS  +  +I +   D  E   LFN    +P +  KA+WAL++   
Sbjct: 58  EARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLFNAIETMPCVKKKADWALRWIGD 117

Query: 169 LSSPSFHYWNKRRRSRILTRSLRF 192
             +     + +R  +      + F
Sbjct: 118 KEA----TYGERVVAFAAVEGIFF 137


>gi|256785295|ref|ZP_05523726.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           lividans TK24]
 gi|289769189|ref|ZP_06528567.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           lividans TK24]
 gi|289699388|gb|EFD66817.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           lividans TK24]
          Length = 343

 Score =  181 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 58/184 (31%), Positives = 94/184 (51%), Gaps = 8/184 (4%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           E  V+   K +L+   ++  L P++Y   +E+Y  A  N W   EV +  D+A       
Sbjct: 4   ETPVHPTTKNLLDPGFEL-TLRPMRYPDFYERYRDAIKNTWHVEEVDLHSDVADLAK--- 59

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           L+  E+ +I R + FFA+ +S+VANN+VL +Y+H+++PE R YL RQ FEEAVH   +  
Sbjct: 60  LSPMEQHLIGRLVAFFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLT 119

Query: 134 IITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSL 190
           ++ +   D  +    F     +PSI  KA +  ++  ++ S       K  R R L   +
Sbjct: 120 LLDTYLPDPEDRAAAFAAVENIPSIREKAEFCFRWMDSVESID-RLETKADRRRFLLNLI 178

Query: 191 RFLC 194
            F  
Sbjct: 179 CFAA 182


>gi|238061574|ref|ZP_04606283.1| ribonucleoside-diphosphate reductase [Micromonospora sp. ATCC
           39149]
 gi|237883385|gb|EEP72213.1| ribonucleoside-diphosphate reductase [Micromonospora sp. ATCC
           39149]
          Length = 344

 Score =  181 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 7/184 (3%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
                +D +  L        L P++Y   ++++  A  N W   EV +  DLA       
Sbjct: 4   TSEPRLDTRHTLLDPGMDLTLRPMRYPHFFDRFKDAIKNTWTVEEVDLHSDLADLA---R 60

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           L+  ER ++ R + FFA+ +++VANN+VL +Y+H+++PE R YL RQ FEEAVH   +  
Sbjct: 61  LSPAERHLVSRLVAFFATGDTIVANNLVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLN 120

Query: 134 IITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSL 190
           ++ +   DE E    F     +PSI  KA +  ++  ++         +  R   L   +
Sbjct: 121 LLDTYVPDERERFAAFAAIENIPSIRRKAEFCFRWIDSIFE-LRELKTREDRRAFLLNLI 179

Query: 191 RFLC 194
            F  
Sbjct: 180 CFAA 183


>gi|117928932|ref|YP_873483.1| ribonucleoside-diphosphate reductase [Acidothermus cellulolyticus
           11B]
 gi|117649395|gb|ABK53497.1| Ribonucleoside-diphosphate reductase [Acidothermus cellulolyticus
           11B]
          Length = 348

 Score =  181 bits (461), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 54/178 (30%), Positives = 92/178 (51%), Gaps = 8/178 (4%)

Query: 20  DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER 79
           +   +L+   D+  L P++Y   +E++ +A  N W   EV +  DLA  +    L+  E 
Sbjct: 15  ERHALLDPGMDL-TLRPMRYPHFFERFKAAIRNTWTVEEVDLHSDLADLRK---LSPAEH 70

Query: 80  LMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
            ++KR + FFA+ +++VANN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ +  
Sbjct: 71  HLVKRLVAFFATGDTIVANNLVLNLYQHINSPEARLYLSRQLFEEAVHVQFYLALLDTYI 130

Query: 140 LDE---GELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            DE    E F     +PSI  KA++  ++  ++            R   L   + F  
Sbjct: 131 TDERERAEAFAAIENIPSIKRKADFCFRWIDSIFD-LRELRTAADRRSFLLNLICFAA 187


>gi|271967540|ref|YP_003341736.1| ribonucleoside-diphosphate reductase [Streptosporangium roseum DSM
           43021]
 gi|270510715|gb|ACZ88993.1| Ribonucleoside-diphosphate reductase [Streptosporangium roseum DSM
           43021]
          Length = 331

 Score =  181 bits (461), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 56/165 (33%), Positives = 86/165 (52%), Gaps = 7/165 (4%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
            L P++Y   +E+Y +A  N W   EV +  DLA       +T +ER +I R + FFA+ 
Sbjct: 10  TLRPMRYPEFYERYRAAIRNTWTVEEVDLNSDLADLA---RMTPEERHLINRLVAFFATG 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMY 149
           +S+VANN+VL +Y+H++ PE R YL RQ FEEAVH   +  ++ +   D  E    F   
Sbjct: 67  DSIVANNLVLNLYQHVNAPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDHDERVKAFAAV 126

Query: 150 REVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             +PSI  KA +  ++  +L         + RR+  L   + F  
Sbjct: 127 EHIPSIRNKAEFCFRWIDSLGGLDRLESREDRRA-FLLNLICFAA 170


>gi|155122339|gb|ABT14207.1| hypothetical protein MT325_M653L [Paramecium bursaria chlorella
           virus MT325]
          Length = 326

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 48/163 (29%), Positives = 77/163 (47%), Gaps = 18/163 (11%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
            P+KY   +  Y  A +  W   EVP+  D+A W+ K  L DDER  IK  LGFFA S+ 
Sbjct: 21  FPIKYPDVFAMYKKAVSTFWTVEEVPLNQDIADWRDK--LNDDERHFIKTILGFFAGSDG 78

Query: 95  LVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYRE 151
           +V  NI       +++P  R +   Q F E++HS  +  ++ +L  D+ E   LF+    
Sbjct: 79  MVMENIANNFSTEVTDPSARLFYAYQMFNESIHSEMYSLLLDALIEDDAERNSLFDAIET 138

Query: 152 VPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           +P++  KA WA ++               +      R + ++C
Sbjct: 139 IPAVGKKAAWAQKFLS-------------QDKSFAERLVAWVC 168


>gi|317472120|ref|ZP_07931452.1| ribonucleotide reductase [Anaerostipes sp. 3_2_56FAA]
 gi|316900524|gb|EFV22506.1| ribonucleotide reductase [Anaerostipes sp. 3_2_56FAA]
          Length = 347

 Score =  181 bits (460), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 84/190 (44%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
            P+       +V  +RM+N  + ++N    +KY W    Y  A NN W+P E+ +  D+ 
Sbjct: 7   KPLFNPYGDTDVRKRRMINGNTTNLNDFNNMKYPWVSGWYRQAMNNFWIPEEINLGTDIK 66

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +K    L++ ER    + L F    +S+   N+   I  +++  E    L  QAF+EAV
Sbjct: 67  DYKQ---LSEPERRAYDKILSFLIFLDSIQTANLP-NISEYITANEVNLCLSIQAFQEAV 122

Query: 127 HSHTFQYIITSLGLD--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRS 183
           HS ++ Y++ ++       ++   ++  P +  +  +    Y    ++ +   + K   +
Sbjct: 123 HSQSYSYMLDTICEPQERNDILYQWKNDPHLLERNQFIGDLYNDFQTNKNTETFVKTLVA 182

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 183 NYILEGIYFY 192


>gi|163955147|ref|YP_001648251.1| hypothetical protein OsV5_174r [Ostreococcus virus OsV5]
 gi|163638596|gb|ABY27955.1| hypothetical protein OsV5_174r [Ostreococcus virus OsV5]
          Length = 322

 Score =  181 bits (460), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 53/181 (29%), Positives = 75/181 (41%), Gaps = 18/181 (9%)

Query: 17  VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           V  +   +L +  +   + PLKY   WE Y  A  ++W   EV +  DL  WK+   L +
Sbjct: 2   VEEEYDPILASTLNRFTVFPLKYPHLWELYKKAQMSNWTAEEVDLSKDLDDWKT---LNE 58

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
           +E+  IK  L FFA S+ +V  NI       +   E R +   Q   E VH  T+  +I 
Sbjct: 59  NEQKFIKYILAFFAGSDGIVFENINNNFADEVQISEARSFYAYQCHNEMVHGETYSKLID 118

Query: 137 SLGLDE---GELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
               D     ELF   + VP I  KA WA+++  T S                 R   F 
Sbjct: 119 KYIKDPSEKKELFEAIQTVPCIEKKAQWAMKWFDTKS------------RSFAERLFAFA 166

Query: 194 C 194
           C
Sbjct: 167 C 167


>gi|297202281|ref|ZP_06919678.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sviceus ATCC 29083]
 gi|197710199|gb|EDY54233.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sviceus ATCC 29083]
          Length = 340

 Score =  181 bits (459), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 53/183 (28%), Positives = 92/183 (50%), Gaps = 8/183 (4%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
             +  + K +L+   ++  L P++Y   +E+Y  A  N W   EV +  D+        L
Sbjct: 2   PVMTSEAKNLLDPGFEL-TLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVTDLAK---L 57

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           +  E+ +I R + FFA+ +S+VANN+VL +Y+H+++PE R YL RQ FEEAVH   +  +
Sbjct: 58  SPAEQHLIGRLVAFFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTL 117

Query: 135 ITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           + +   D  +    F+    +PSI  KA +  ++   +        ++  R R L   + 
Sbjct: 118 LDTYLPDPQDRAAAFDAVENIPSIREKAEFCFRWINEVEKLD-RLESQADRRRFLLNLIC 176

Query: 192 FLC 194
           F  
Sbjct: 177 FAA 179


>gi|167947199|ref|ZP_02534273.1| Ribonucleotide reductase, beta subunit [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 241

 Score =  181 bits (459), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 72/196 (36%), Positives = 106/196 (54%), Gaps = 6/196 (3%)

Query: 2   ANNTGLSPIQAGE----KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPT 57
           A  T  +P+        K VN DDKR++N  +DVNQL P KY WAWE +L+A  NHW P 
Sbjct: 29  AVQTEATPLPVAAPLDTKPVNPDDKRVVNGLTDVNQLAPFKYPWAWEYFLNANKNHWTPL 88

Query: 58  EVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYL 117
           ++ M  D+  +  K  LT +ER + +  L +  +S+ L   NI LA+   +S PE + Y 
Sbjct: 89  DINMAQDVHDYHHK--LTLEERHIYENVLSYLTTSDILAMRNIGLAVMEKMSAPELQIYQ 146

Query: 118 LRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYW 177
            RQ +EEA+H+ T+Q+ I ++GLD+ E++N YR VP I  K   A +   ++        
Sbjct: 147 ARQVYEEALHTWTYQHCIETIGLDQVEIYNRYRVVPEINGKIQIANRRLHSILRSDVDLS 206

Query: 178 NKRRRSRILTRSLRFL 193
           N+      L   L F 
Sbjct: 207 NRDELENFLMAYLFFA 222


>gi|83649535|ref|YP_437970.1| ribonucleotide reductase subunit beta [Hahella chejuensis KCTC
           2396]
 gi|83637578|gb|ABC33545.1| Ribonucleotide reductase, beta subunit [Hahella chejuensis KCTC
           2396]
          Length = 405

 Score =  181 bits (459), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 65/187 (34%), Positives = 104/187 (55%), Gaps = 4/187 (2%)

Query: 9   PIQAGEK--RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           P +  +K   VN DDKR++N  +D+NQL P KY WAWE +L+A  NHW P ++ M  D+ 
Sbjct: 66  PEEVPQKLDPVNPDDKRVVNGMTDINQLAPFKYPWAWEFFLNANKNHWTPLDINMSQDVY 125

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +  K  LT +E+ + +  L +  +S+ L   NI LA+   +S PE + Y  RQ +EE++
Sbjct: 126 DYHHK--LTLEEKHVYENVLAYLTTSDILAMRNIGLAVMEKMSAPELQIYQARQVYEESL 183

Query: 127 HSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRIL 186
           H+ T+Q+ I ++GLD+ E++N YR  P+I  K     +    L  P  +  N+      +
Sbjct: 184 HTWTYQHCIETIGLDQSEIYNRYRVTPAIYRKIKMGNERISALLRPDINLRNRDDLETFV 243

Query: 187 TRSLRFL 193
              + F 
Sbjct: 244 MAYIFFA 250


>gi|320107274|ref|YP_004182864.1| Ribonucleoside-diphosphate reductase [Terriglobus saanensis SP1PR4]
 gi|319925795|gb|ADV82870.1| Ribonucleoside-diphosphate reductase [Terriglobus saanensis SP1PR4]
          Length = 346

 Score =  181 bits (459), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 51/165 (30%), Positives = 85/165 (51%), Gaps = 6/165 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
            L P++Y   ++ +     N W   EV  Q DL   K +  LT  E   I+R + FFA+ 
Sbjct: 24  TLRPMRYPQFYDMFRDGIKNTWTVEEVDFQTDLVDLKQR--LTPAEIHTIQRLVAFFATG 81

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMY 149
           +S+V+NN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ +   +  E    F   
Sbjct: 82  DSIVSNNLVLNLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDNYIPEPEERNAAFAAV 141

Query: 150 REVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             +PSI+ KA++ +++  ++         K  R + L   + F  
Sbjct: 142 ENIPSISKKADFCMKWMDSIQQLD-QLETKEHRRQFLLNLICFAA 185


>gi|21223593|ref|NP_629372.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           coelicolor A3(2)]
 gi|7328345|emb|CAB82486.1| class I ribonucleotide-diphosphate reductase small subunit chain
           [Streptomyces coelicolor A3(2)]
 gi|8546891|emb|CAB94610.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
           coelicolor A3(2)]
          Length = 343

 Score =  180 bits (458), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 57/184 (30%), Positives = 93/184 (50%), Gaps = 8/184 (4%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           E   +   K +L+   ++  L P++Y   +E+Y  A  N W   EV +  D+A       
Sbjct: 4   ETPAHPTTKNLLDPGFEL-TLRPMRYPDFYERYRDAIKNTWHVEEVDLHSDVADLAK--- 59

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           L+  E+ +I R + FFA+ +S+VANN+VL +Y+H+++PE R YL RQ FEEAVH   +  
Sbjct: 60  LSPMEQHLIGRLVAFFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLT 119

Query: 134 IITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSL 190
           ++ +   D  +    F     +PSI  KA +  ++  ++ S       K  R R L   +
Sbjct: 120 LLDTYLPDPEDRAAAFAAVENIPSIREKAEFCFRWMDSVESID-RLETKADRRRFLLNLI 178

Query: 191 RFLC 194
            F  
Sbjct: 179 CFAA 182


>gi|313117005|ref|YP_004038129.1| ribonucleotide reductase, beta subunit [Halogeometricum borinquense
           DSM 11551]
 gi|312294957|gb|ADQ68993.1| ribonucleotide reductase, beta subunit [Halogeometricum borinquense
           DSM 11551]
          Length = 330

 Score =  180 bits (458), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 72/168 (42%), Positives = 107/168 (63%), Gaps = 1/168 (0%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
           +   D N++LP+ Y WA + Y     N+W+P E+PMQ+D+A W + + L+D E+ +++ N
Sbjct: 7   DTEHDPNKILPIDYDWARQYYRDGVANNWVPEEIPMQEDIAQW-NGDALSDSEKQLVEWN 65

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL 145
           LGFF+++ESL ANNIVLA+Y +++ PECRQYLLRQA+EEA+H+ TF Y   SLG D   +
Sbjct: 66  LGFFSTAESLTANNIVLALYEYVTAPECRQYLLRQAYEEAIHTDTFIYCCDSLGFDPEYM 125

Query: 146 FNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           + MY  VPSI  K  + +  T+ L  P F   +      +L   + F 
Sbjct: 126 YGMYDRVPSIKEKDEFVVDLTRNLDDPDFTVEDTADVRDLLRDLVGFY 173


>gi|167748341|ref|ZP_02420468.1| hypothetical protein ANACAC_03085 [Anaerostipes caccae DSM 14662]
 gi|167652333|gb|EDR96462.1| hypothetical protein ANACAC_03085 [Anaerostipes caccae DSM 14662]
          Length = 358

 Score =  180 bits (458), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 84/190 (44%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
            P+       +V  +RM+N  + ++N    +KY W    Y  A NN W+P E+ +  D+ 
Sbjct: 18  KPLFNPYGDTDVRKRRMINGNTTNLNDFNNMKYPWVSGWYRQAMNNFWIPEEINLGTDIK 77

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +K    L++ ER    + L F    +S+   N+   I  +++  E    L  QAF+EAV
Sbjct: 78  DYKQ---LSEPERRAYDKILSFLIFLDSIQTANLP-NISEYITANEVNLCLSIQAFQEAV 133

Query: 127 HSHTFQYIITSLGLD--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRS 183
           HS ++ Y++ ++       ++   ++  P +  +  +    Y    ++ +   + K   +
Sbjct: 134 HSQSYSYMLDTICEPQERNDILYQWKNDPHLLERNQFIGDLYNDFQTNKNTETFVKTLVA 193

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 194 NYILEGIYFY 203


>gi|155370982|ref|YP_001426516.1| hypothetical protein ATCV1_Z035L [Acanthocystis turfacea Chlorella
           virus 1]
 gi|155124302|gb|ABT16169.1| hypothetical protein ATCV1_Z035L [Acanthocystis turfacea Chlorella
           virus 1]
          Length = 325

 Score =  180 bits (458), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 47/163 (28%), Positives = 74/163 (45%), Gaps = 18/163 (11%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
            P++Y   ++ Y  A    W   EV +  D+  W+ K  L DDER  IK  LGFFA S+ 
Sbjct: 20  FPIRYPDIFQMYKKAVATFWTVEEVQLNQDVVDWREK--LNDDERHFIKHILGFFAGSDG 77

Query: 95  LVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYRE 151
           +V  N+       +++P  R +   Q + E+VHS  +  ++ +L  DE E   LF     
Sbjct: 78  MVMENLNNNFAEEVTDPSARMFYAYQGYNESVHSEQYSLLLDALIEDETERNKLFEAIET 137

Query: 152 VPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           +P++  KA WA +Y               R      R + ++C
Sbjct: 138 IPAVGKKAAWASKYFS-------------RDRSFAERLVAWVC 167


>gi|131840053|ref|YP_001096062.1| ORF23 [Cyprinid herpesvirus 3]
 gi|84181618|gb|ABC55221.1| hypothetical protein [Cyprinid herpesvirus 3]
 gi|109706628|gb|ABG42854.1| ORF23 [Cyprinid herpesvirus 3]
 gi|129560539|dbj|BAF48834.1| ribonucleotide reductase small chain [Cyprinid herpesvirus 3]
          Length = 335

 Score =  180 bits (457), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 10/174 (5%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L   +    L  +++   W  Y  A  ++W   E+ +  D A W+S   L+++E+  
Sbjct: 14  EPLLAPSNSRFTLDVIEHQDIWSMYKKAQFSNWTAEEIDLAKDTAGWES---LSENEKFF 70

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           +K  L FFA+S+ +V  N+     + +   E R +   Q   E VHS  +  ++ +  LD
Sbjct: 71  LKNILAFFAASDGIVNENLATRFMKEVQYFEARCFYGFQIAIENVHSEVYAKLLNTYILD 130

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             E   LF     +P I  KA+WAL + ++  +     + +R  +      + F
Sbjct: 131 PVERNGLFKAMETMPCIKKKADWALNWIESPDA----TFGERLVAFTAVEGIFF 180


>gi|297736972|emb|CBI26173.3| unnamed protein product [Vitis vinifera]
          Length = 312

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 19/153 (12%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            Y  A  + W   EV +  D+  W+S   L++ E+  I   L FFA+S+ +V  N+    
Sbjct: 1   MYKKAEASFWTAEEVDLSHDVQQWES---LSNSEKHFISHVLAFFAASDGIVLENLAARF 57

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANW 161
              +  PE R +   Q   E +HS  +  ++ +   D  E   LFN    +  +  KA W
Sbjct: 58  LHDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIESISCVAGKAKW 117

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           AL + Q+ +                 R + F C
Sbjct: 118 ALDWIQSST-------------LFAERLIAFAC 137


>gi|269865675|ref|XP_002652006.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063328|gb|EED42049.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 183

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 6/155 (3%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L+       + P++Y   WE Y    +  W   EV M  D   +   + LT +E+  
Sbjct: 26  EPLLDEAKKRYVIFPIQYPEIWEFYKMHESTFWTVEEVDMTFDCEHF---STLTPNEQFF 82

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+S+ +V  N+V      +   E + +   Q   E +HS  +  +I +L  D
Sbjct: 83  IKYVLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAIENIHSEMYSKLIETLIRD 142

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPS 173
           + E   LFN    +PSI  KA WA ++  + +S  
Sbjct: 143 KEEQTYLFNAIENIPSIRKKALWAQKWIASDTSFD 177


>gi|190572323|ref|YP_001970168.1| putative ribonucleotide diphosphate reductase, small chain
           [Stenotrophomonas maltophilia K279a]
 gi|190010245|emb|CAQ43853.1| putative ribonucleotide diphosphate reductase, small chain
           [Stenotrophomonas maltophilia K279a]
          Length = 339

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 54/177 (30%), Positives = 93/177 (52%), Gaps = 5/177 (2%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
            K+ML        L P++Y   ++ Y +A  N W   E+  Q D+    SK  ++  ER 
Sbjct: 5   PKQMLLDPGFELTLRPMRYPQFYDMYRNAIKNTWTVEEINFQIDITDLHSK--MSPGERH 62

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
           +I R + FFA+ +S+V+NN+VL +Y+HL+ PE R YL RQ +EEA+H   +  ++ +   
Sbjct: 63  LIHRLVAFFATGDSIVSNNLVLNLYQHLNAPEARMYLSRQLYEEALHVQFYLTLLDNYLP 122

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           D  E    F+    + SI  KA++  ++  ++ S +     ++RR  +L +     C
Sbjct: 123 DPEERAKAFSAVENIDSIKKKADFCFKWIDSIQSLTRIETREQRRQFLLNQICFAAC 179


>gi|269302771|gb|ACZ32871.1| ribonucleoside-diphosphate reductase beta subunit, truncated
           [Chlamydophila pneumoniae LPCoLN]
          Length = 159

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 92/147 (62%), Positives = 114/147 (77%), Gaps = 2/147 (1%)

Query: 10  IQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           +    KRV V  K ++N    DVNQL+P+KY WAWE YL+ C N+W+PTEVPM  D+ LW
Sbjct: 6   LDGKLKRVEVSKKGLVNCNQVDVNQLVPIKYKWAWEHYLNGCANNWLPTEVPMARDIELW 65

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           KS + L++DER +I  NLGFF+++ESLV NNIVLAI++H++NPE RQYLLRQAFEEAVH+
Sbjct: 66  KS-DELSEDERRVILLNLGFFSTAESLVGNNIVLAIFKHITNPEARQYLLRQAFEEAVHT 124

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSI 155
           HTF YI  SLGLDEGE+FN Y E  SI
Sbjct: 125 HTFLYICESLGLDEGEVFNAYNERASI 151


>gi|194363985|ref|YP_002026595.1| Ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia
           R551-3]
 gi|194346789|gb|ACF49912.1| Ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia
           R551-3]
          Length = 339

 Score =  180 bits (456), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 53/177 (29%), Positives = 91/177 (51%), Gaps = 5/177 (2%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
            K+ML        L P++Y   ++ Y +A  N W   E+  Q D++   SK  ++  ER 
Sbjct: 5   PKQMLLDPGFELTLRPMRYPQFYDMYRNAIKNTWTVEEINFQIDISDLHSK--MSPGERH 62

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
           +I R + FFA+ +S+V+NN+VL +Y+HL+ PE R YL RQ +EEA+H   +  ++ +   
Sbjct: 63  LIHRLVAFFATGDSIVSNNLVLNLYQHLNAPEARMYLSRQLYEEALHVQFYLTLLDNYLP 122

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           D  E    F     + SI  KA++  ++  ++ +       + RR  +L +     C
Sbjct: 123 DPDERVKAFAAVENIDSIKKKADFCFKWIDSIQNLKRIETREERRQFLLNQICFAAC 179


>gi|302542646|ref|ZP_07294988.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302460264|gb|EFL23357.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           himastatinicus ATCC 53653]
          Length = 343

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 52/165 (31%), Positives = 85/165 (51%), Gaps = 7/165 (4%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
            L P++Y   +++Y  A  N W   EV +  D+A       L+  E+ MI R + FFA+ 
Sbjct: 22  TLRPMRYPQFYDRYRDAIKNTWTVEEVDLHSDVADLAK---LSPGEQHMISRLVAFFATG 78

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL---FNMY 149
           +S+V+NN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ +   D  +    F   
Sbjct: 79  DSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAASFAAV 138

Query: 150 REVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             +PSI  KA +  ++  ++        +K  R R L   + F  
Sbjct: 139 ENIPSIREKAEFCFRWMDSVEKID-RLESKADRRRFLLNLICFAA 182


>gi|254521240|ref|ZP_05133295.1| ribonucleoside-diphosphate reductase, beta subunit
           [Stenotrophomonas sp. SKA14]
 gi|219718831|gb|EED37356.1| ribonucleoside-diphosphate reductase, beta subunit
           [Stenotrophomonas sp. SKA14]
          Length = 339

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 53/177 (29%), Positives = 88/177 (49%), Gaps = 5/177 (2%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
            K+ML        L P++Y   ++ Y +A  N W   E+  Q D+    SK  ++  ER 
Sbjct: 5   PKQMLLDPGFELTLRPMRYPQFYDMYRNAIKNTWTVEEINFQIDITDLHSK--MSPGERH 62

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
           +I R + FFA+ +S+V+NN+VL +Y+HL+ PE R YL RQ +EEA+H   +  ++ +   
Sbjct: 63  LIHRLVAFFATGDSIVSNNLVLNLYQHLNAPEARMYLSRQLYEEALHVQFYLTLLDNYLP 122

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           D  E    F     + SI  KA++  ++  ++           RR  +L +     C
Sbjct: 123 DPEERVKAFAAVENIDSIKKKADFCFKWIDSIQDLKRIETRAERRQFLLNQICFAAC 179


>gi|302867100|ref|YP_003835737.1| ribonucleotide reductase [Micromonospora aurantiaca ATCC 27029]
 gi|315506490|ref|YP_004085377.1| ribonucleotide reductase [Micromonospora sp. L5]
 gi|302569959|gb|ADL46161.1| ribonucleotide reductase [Micromonospora aurantiaca ATCC 27029]
 gi|315413109|gb|ADU11226.1| ribonucleotide reductase [Micromonospora sp. L5]
          Length = 342

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 53/176 (30%), Positives = 90/176 (51%), Gaps = 8/176 (4%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
             +L+   D+  L P++Y   ++++  A  N W   EV +  DLA       L+  ER +
Sbjct: 11  HMLLDPGMDL-TLRPMRYPRFFDRFKDAIKNTWTVEEVDLHSDLADLAK---LSPAERHL 66

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           + R + FFA+ +++VANN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ +   D
Sbjct: 67  VSRLVAFFATGDTIVANNLVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPD 126

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           E E    F+    +PSI  KA +  ++  ++         +  R   L   + F  
Sbjct: 127 EKERFAAFDAVENIPSIARKAEFCFRWIDSIFE-LRELRTRADRRAFLLNLICFAA 181


>gi|294631326|ref|ZP_06709886.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. e14]
 gi|292834659|gb|EFF93008.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
           sp. e14]
          Length = 339

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 53/165 (32%), Positives = 83/165 (50%), Gaps = 7/165 (4%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
            L P++Y   +E+Y  A  N W   EV +  D+A       LT  E+ +I R + FFA+ 
Sbjct: 18  TLRPMRYPDFYERYRDAIKNTWHVEEVDLHSDVADLAK---LTPGEQHLIGRLVAFFATG 74

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMY 149
           +S+VANN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ +   D  +    F   
Sbjct: 75  DSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAAAFAAV 134

Query: 150 REVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             +PSI  KA +   +  ++         +  R R L   + F  
Sbjct: 135 ENIPSIREKAEFCFTWMDSVEKLD-RLETRADRRRFLLNLICFAA 178


>gi|322368525|ref|ZP_08043093.1| ribonucleotide-diphosphate reductase subunit beta [Haladaptatus
           paucihalophilus DX253]
 gi|320551809|gb|EFW93455.1| ribonucleotide-diphosphate reductase subunit beta [Haladaptatus
           paucihalophilus DX253]
          Length = 330

 Score =  179 bits (454), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 76/169 (44%), Positives = 107/169 (63%), Gaps = 1/169 (0%)

Query: 25  LNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR 84
            +   D N++LPL Y WA + Y +  NN+W+P E+PMQDD++ W + + L+D ER +I+ 
Sbjct: 6   TDNEHDPNKILPLDYDWARDYYEAGVNNNWVPEEIPMQDDISQW-NGDALSDAERQLIEW 64

Query: 85  NLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE 144
           NLGFF+++ESL ANNIVLA+Y +++ PECRQYLLRQA+EEA+H+ TF Y   SLG D   
Sbjct: 65  NLGFFSTAESLTANNIVLALYEYVTAPECRQYLLRQAYEEAIHTDTFIYCCDSLGFDPDY 124

Query: 145 LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           L+ MY  VPSI  K  + +  T+ +  P F           L   + F 
Sbjct: 125 LYGMYDRVPSIAEKDEFVVDLTRAIDRPDFTIETDADVREFLRDLVGFY 173


>gi|42523460|ref|NP_968840.1| ribonucleotide-diphosphate reductase small chain [Bdellovibrio
           bacteriovorus HD100]
 gi|39575666|emb|CAE79833.1| ribonucleotide-diphosphate reductase small chain [Bdellovibrio
           bacteriovorus HD100]
          Length = 336

 Score =  178 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 52/164 (31%), Positives = 88/164 (53%), Gaps = 6/164 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
            L P+KY   +E Y +   N W   EV    DL    SK  +T+ E+ +I+R + FFA+ 
Sbjct: 14  TLRPMKYPIFYEMYKNGIKNTWTVDEVDFSTDLVDLHSK--MTESEKHLIRRLVAFFATG 71

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMY 149
           +S+V NN+VL +Y+H+++PE R YL RQ +EEA+H   +  ++ +   +  E    F   
Sbjct: 72  DSIVGNNLVLNLYKHVNSPEGRMYLSRQLYEEALHVQFYLTLLDNYIPNPDERAEAFAAV 131

Query: 150 REVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
             +PSI  KA++  ++  +++  +     + RR R L   + F 
Sbjct: 132 ENIPSIKKKADFCYKWIDSINELTELNTIEDRR-RFLMNLICFA 174


>gi|257053403|ref|YP_003131236.1| ribonucleotide-diphosphate reductase subunit beta [Halorhabdus
           utahensis DSM 12940]
 gi|256692166|gb|ACV12503.1| Ribonucleoside-diphosphate reductase [Halorhabdus utahensis DSM
           12940]
          Length = 330

 Score =  178 bits (453), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 76/167 (45%), Positives = 109/167 (65%), Gaps = 1/167 (0%)

Query: 27  ARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNL 86
           A  D N++LP+ Y WA E Y +  NN+W+P E+PMQDD+A W + + LTD ER +++ NL
Sbjct: 8   AEHDPNKILPIDYDWAREYYEAGVNNNWVPEEIPMQDDVAQW-NGDELTDAERQLVEWNL 66

Query: 87  GFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELF 146
           GFF+++ESL ANN+VLA+Y +++ PECRQYLLRQA+EEA+H+ TF Y   SLG +   L+
Sbjct: 67  GFFSTAESLTANNLVLALYEYVTAPECRQYLLRQAYEEAIHTDTFIYCCDSLGFEPEYLY 126

Query: 147 NMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            MY  VPSI  K  + +  T+++  P F          +L   + F 
Sbjct: 127 GMYDRVPSIEEKDQFVVDLTRSIDDPEFTIDGDSDVRDLLRDLVGFY 173


>gi|73852496|ref|YP_293780.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi
           virus 86]
 gi|72415212|emb|CAI65449.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi
           virus 86]
          Length = 325

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 47/175 (26%), Positives = 77/175 (44%), Gaps = 19/175 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    D   L P+ +   +E+Y  A  + W  +E+ +  D   W     LT++E+  
Sbjct: 3   EPLLIENKDRFVLFPIVHEDIYEEYKKAEASLWGVSEIDISTDKTDW---PKLTENEQHF 59

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+++ +V  N+V      +  PE R +   Q   E VH+ T+  ++ SL  D
Sbjct: 60  IKYILAFFATADGIVFENLVTNFASEIQYPEARCFYGVQMMIENVHAETYSMMLQSLVED 119

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           + E   LF   R + SI  KA+WAL++                      R + F 
Sbjct: 120 KDEQRNLFRAIRTIQSIKNKADWALKWMN-------------NERSFAERLIAFA 161


>gi|222834323|gb|EEE72800.1| predicted protein [Populus trichocarpa]
          Length = 146

 Score =  178 bits (452), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 81/125 (64%), Positives = 100/125 (80%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           +      KRVN  DKR++NA++DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+AL
Sbjct: 19  AAPSTTHKRVNAADKRIINAKTDVNQLVPFKYKWAWEKYLATCANHWMPQEVNMNRDIAL 78

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           WK  NGLT+DER +IKRNLGFF +++SL ANNIVL  YRH++ PECRQ+LLRQAFEEA+H
Sbjct: 79  WKDPNGLTEDERRIIKRNLGFFVTADSLAANNIVLGTYRHITAPECRQFLLRQAFEEAIH 138

Query: 128 SHTFQ 132
           +H +Q
Sbjct: 139 THAYQ 143


>gi|313768358|ref|YP_004062038.1| hypothetical protein MpV1_155c [Micromonas sp. RCC1109 virus MpV1]
 gi|312599054|gb|ADQ91078.1| hypothetical protein MpV1_155c [Micromonas sp. RCC1109 virus MpV1]
          Length = 388

 Score =  178 bits (451), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 52/181 (28%), Positives = 77/181 (42%), Gaps = 19/181 (10%)

Query: 17  VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           +  + + +L +  +   + PLKY   WE Y  A  ++W   EV +  D+  WK+   L D
Sbjct: 69  IEDEYEPILASTLNRFTVFPLKYPELWELYKKAQMSNWTAEEVDLSKDMDDWKT---LND 125

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
           +E+  IK  L FFA S+ +V  NI       +   E R +   Q+  E VH  T+  +I 
Sbjct: 126 NEQKFIKYILAFFAGSDGIVFENINNNFADEVQISEARSFYAYQSHNEMVHGETYSKLID 185

Query: 137 SLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
               D  E   LF   + VP I  KANWAL++               +      R   F 
Sbjct: 186 KYIKDGAEKKQLFEAIQTVPCIERKANWALKWF-------------DKSRPFAERLFAFA 232

Query: 194 C 194
           C
Sbjct: 233 C 233


>gi|157952945|ref|YP_001497837.1| hypothetical protein NY2A_B641R [Paramecium bursaria Chlorella
           virus NY2A]
 gi|155123172|gb|ABT15040.1| hypothetical protein NY2A_B641R [Paramecium bursaria Chlorella
           virus NY2A]
          Length = 324

 Score =  177 bits (450), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 19/177 (10%)

Query: 22  KRMLNARSDV-NQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           + +L+          P++Y   W  Y  A    W   EVP+  D+A W+ K  L +DER 
Sbjct: 5   EPILSDNGSRKFSAFPIQYHDLWNMYKKAVATFWTTEEVPLNADVADWREK--LNNDERH 62

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            IK  LGFFA S+ +V  N+       +  PE RQ+   Q F E+VHS  +  +I +L  
Sbjct: 63  FIKHILGFFAGSDGIVMENLQTNFGVEVMAPEARQFYAYQTFNESVHSEMYALLIDALIS 122

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           DE E   LF+    +P++  KA WA ++ +             R      R + ++C
Sbjct: 123 DEQERLDLFDAIETIPAVHNKAKWAQKWLK-----------PER--SFAERLVAWIC 166


>gi|115691069|ref|XP_001203692.1| PREDICTED: similar to ribonuleotide reductase small subunit,
           partial [Strongylocentrotus purpuratus]
 gi|115735426|ref|XP_798682.2| PREDICTED: similar to ribonuleotide reductase small subunit,
           partial [Strongylocentrotus purpuratus]
          Length = 258

 Score =  177 bits (449), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 10/144 (6%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           + W   EV + +D   WK    L  +E+  +   L FFA+S+ +V  N+V    + +  P
Sbjct: 1   SFWTTEEVDLGED---WKDWQKLKPEEKHFVTHVLAFFAASDGIVNENLVERFSQEVQIP 57

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQT 168
           E + +   Q   E +HS  +  +I +   D  E   LFN  + +P +  KA+WAL++  +
Sbjct: 58  EAKCFYGFQIAMENIHSEMYSLLIDTYVKDPTEKHRLFNAIQTMPFVKKKADWALKWIAS 117

Query: 169 LSSPSFHYWNKRRRSRILTRSLRF 192
             S     + +R  +      + F
Sbjct: 118 DES----TFAERLVAFAAVEGIFF 137


>gi|283481249|emb|CAZ69365.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi
           virus 99B1]
          Length = 325

 Score =  176 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 47/175 (26%), Positives = 77/175 (44%), Gaps = 19/175 (10%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L    D   L P+ +   +E+Y  A  + W  +E+ +  D   W     LT++E+  
Sbjct: 3   EPILIENEDRFVLFPIVHEDIYEEYKKAEASLWGVSEIDISTDKTDW---PKLTENEQHF 59

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           IK  L FFA+++ +V  N+V      +  PE R +   Q   E VH+ T+  ++ SL  D
Sbjct: 60  IKYILAFFATADGVVFENLVTNFASEIQYPEARCFYGVQMMIENVHAETYSMMLQSLVED 119

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           + E   LF   R + SI  KA+WAL++                      R + F 
Sbjct: 120 KDEQRNLFRAIRTIQSIKNKADWALKWMN-------------NERSFAERLIAFA 161


>gi|311898297|dbj|BAJ30705.1| putative ribonucleoside-diphosphate reductase subunit beta
           [Kitasatospora setae KM-6054]
          Length = 339

 Score =  176 bits (448), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 58/182 (31%), Positives = 91/182 (50%), Gaps = 7/182 (3%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
             D K+ML        L P++Y   +++Y  A  N W   EV +  D+A       L++ 
Sbjct: 3   TEDRKKMLLDPGFELTLRPMRYPSFYDRYRDAIKNTWTVEEVDLHSDVADLAK---LSEG 59

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           ER MI R + FFA+ +S+V+NN+VL++Y+H+++PE R YL RQ FEEAVH   +  ++ +
Sbjct: 60  ERHMIGRLVAFFATGDSIVSNNVVLSLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDT 119

Query: 138 LGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
              D  +    F     +PSI  KA +  +Y   +        +K  R   L   + F  
Sbjct: 120 YLPDPEDRNAAFAAVENIPSIAQKAQFCFKYMNAVDHID-SLRSKEDRRAFLLNLICFAA 178

Query: 195 RV 196
            V
Sbjct: 179 CV 180


>gi|193890961|gb|ACF28634.1| ribonucleotide reductase [Amphidinium carterae]
          Length = 213

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 11/158 (6%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           ++   WE Y     + W   E+ +  D   W+S   LT  E+  IK  L FFA+S+ +V 
Sbjct: 1   QHADLWEMYKKHEASFWTAEEIDLSKDNVDWES---LTSSEQHFIKHVLAFFAASDGIVL 57

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPS 154
            N+       +  PE R +   Q   E +HS T+  +I     +  E   + N    +P+
Sbjct: 58  ENLAGQFACEIQVPEARAFYGFQIAMENIHSETYSLLIEQYIKEPQEKADILNAIETMPA 117

Query: 155 ITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           +  KA WA+Q+ Q  +S     + +R  +      + F
Sbjct: 118 VAEKAKWAVQWMQRENS-----FTERLVAFAAVEGILF 150


>gi|330467634|ref|YP_004405377.1| ribonucleoside-diphosphate reductase [Verrucosispora maris
           AB-18-032]
 gi|328810605|gb|AEB44777.1| Ribonucleoside-diphosphate reductase [Verrucosispora maris
           AB-18-032]
          Length = 342

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 51/165 (30%), Positives = 85/165 (51%), Gaps = 7/165 (4%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
            L P++Y   ++++  A  N W   EV +  DLA       L+  E+ ++ R + FFA+ 
Sbjct: 21  TLRPMRYPQFFDRFKDAIRNTWTVEEVDLHADLADLAK---LSPAEQHLVSRLVAFFATG 77

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG---ELFNMY 149
           +++VANN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ +   DE    E F   
Sbjct: 78  DTIVANNLVLNLYQHINSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPDEKQRYEAFAAV 137

Query: 150 REVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             +PSI  KA +  ++  ++           RR+  L   + F  
Sbjct: 138 ENIPSIARKAEFCFKWIDSIFELRELKTRADRRA-FLLNLICFAA 181


>gi|312599293|gb|ADQ91316.1| hypothetical protein BpV2_149c [Bathycoccus sp. RCC1105 virus BpV2]
          Length = 387

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 47/175 (26%), Positives = 73/175 (41%), Gaps = 19/175 (10%)

Query: 23  RMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMI 82
            ML        + P+K+   W  Y  A  ++W   E+    D+  W   NGL+D+E+  I
Sbjct: 74  PMLLPTLSRFTVFPIKHENLWSLYKKAQMSNWTAEEIDFSKDMDDW---NGLSDNEKHFI 130

Query: 83  KRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL-- 140
           K  L FFA S+ +V  NI       +   E R +   QA  E VH  T+  +I       
Sbjct: 131 KYILAFFAGSDGIVFENINNNFADEIQLTEARSFYAYQAHNEMVHGETYSKLIDKYIKSS 190

Query: 141 -DEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            ++ +LF   + +P I  KA WA+++               ++     R L F C
Sbjct: 191 TEKNQLFEAIQTIPCIERKAKWAMKWF-------------DKKRPFAERLLAFAC 232


>gi|282174133|ref|YP_003358235.1| ORF96 [Anguillid herpesvirus 1]
 gi|281308976|gb|ADA57859.1| ORF96 [Anguillid herpesvirus 1]
          Length = 328

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 43/176 (24%), Positives = 73/176 (41%), Gaps = 17/176 (9%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L+  ++ +   P++    W  Y +A   +W   EV +  D+  W+ +  L  DER  
Sbjct: 7   EPLLDPANNRDVTFPIREHAIWAMYKTAQAANWSAEEVDLAQDVTHWEKR--LNKDERHF 64

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           I   L FFA+++ LV  N+     + +   E   +   Q   E VH+  +  +I +L  D
Sbjct: 65  ISHVLAFFAAADGLVNANLGQRFTQEVQYLEATYFYNFQMAIENVHAEMYSKLIATLIKD 124

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             E   LFN    +P I  KA WA ++T                +    R + F  
Sbjct: 125 VKEQDRLFNAVERMPCIAKKAEWAKRWTH------------DTNASFGERLVAFAA 168


>gi|313903043|ref|ZP_07836438.1| Ribonucleoside-diphosphate reductase [Thermaerobacter subterraneus
           DSM 13965]
 gi|313466767|gb|EFR62286.1| Ribonucleoside-diphosphate reductase [Thermaerobacter subterraneus
           DSM 13965]
          Length = 336

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 64/174 (36%), Positives = 93/174 (53%), Gaps = 6/174 (3%)

Query: 22  KRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
            R+L     +  QL PL+Y WA+        N W P E+P+ DD+  W+    LTDDER 
Sbjct: 10  DRLLGGDPLEPIQLFPLRYPWAYAHAQQGKRNTWFPEEIPLADDVRDWE--LRLTDDERR 67

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            ++  LGFF   ESLV +N+V++IY  L+ PE R YL RQ +EEA H+  F+Y++ +L +
Sbjct: 68  AVELLLGFFNPMESLVTHNLVMSIYPLLTPPEIRLYLARQIWEEANHTMAFEYVLKTLPV 127

Query: 141 DEGELFNMYREVPSITAKANWALQYT-QTLSSPSFHYWNKRRRSRILTRSLRFL 193
           D   +F  +R VP+I AK  +  + T Q L  P         R   L   + + 
Sbjct: 128 DRERVFAAHRNVPAIRAKEAFQQELTRQLLVRPD--VSTLEGRQAFLRNLIGYY 179


>gi|242309209|ref|ZP_04808364.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pullorum MIT 98-5489]
 gi|239524250|gb|EEQ64116.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pullorum MIT 98-5489]
          Length = 341

 Score =  176 bits (446), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 46/189 (24%), Positives = 92/189 (48%), Gaps = 4/189 (2%)

Query: 7   LSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
              I       +V+++++     + + +L  +KY WA+  +     N W P EV M  D 
Sbjct: 4   RKKIYNPNSNESVNERKIFGGNPTSIFELNKIKYQWAYNLWKVMLANSWFPEEVNMTQDK 63

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             +    GLT +E++   R L      +SL  NN++  +  ++++PE    L+RQAFEEA
Sbjct: 64  RDYAD--GLTPEEKIGYDRALAQLIFMDSLQTNNLIDNVNPYITSPEINLILVRQAFEEA 121

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSR 184
           +HS ++  ++ S+  +  E++ M+R    + +K ++  + Y Q  ++P+     K   + 
Sbjct: 122 LHSQSYAVMVESISANTDEIYEMWRTDMQLRSKNDYIAEVYEQLATNPTERNIIKAMFAN 181

Query: 185 ILTRSLRFL 193
            +   + F 
Sbjct: 182 QILEGIYFY 190


>gi|11544907|emb|CAC17632.1| class I ribonucleotide-diphosphate reductase small chain
           [Streptomyces microflavus]
          Length = 321

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 55/180 (30%), Positives = 91/180 (50%), Gaps = 8/180 (4%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           + + K +L+   ++  L P++Y   +E+Y  A  N W   EV +  D+A       L+  
Sbjct: 3   DKNQKNLLDPGFEL-TLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAK---LSPG 58

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+ MI R + FFA+ +S+VANN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ +
Sbjct: 59  EQHMIGRLVAFFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDT 118

Query: 138 LGLDEGELFNM---YREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
              D  E          +PSI  KA +  ++  ++         +  R R L   + F  
Sbjct: 119 YLPDPAERAAAFAAVENIPSIRDKAQFCFKWMDSVEKID-QLETRADRRRFLLNLICFAA 177


>gi|94986920|ref|YP_594853.1| ribonucleotide reductase, beta subunit [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731169|emb|CAJ54531.1| Ribonucleotide reductase, beta subunit [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 333

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 62/179 (34%), Positives = 99/179 (55%), Gaps = 2/179 (1%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
            VN  DKR++N ++D+NQLLP +Y WAW+ +L A  NHW P E+ M  D+  +     LT
Sbjct: 2   PVNASDKRIVNGKTDINQLLPFRYPWAWDFFLKANQNHWTPLEISMSQDVYDYNH--TLT 59

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
            +ER +    L +  +S+ L   NI LA+   ++ PE + Y  RQ +EEA+H+ T+Q+ I
Sbjct: 60  TNERHVFDNVLAYLTTSDILAMRNIGLAVMEKMTAPELQIYQARQVYEEALHTWTYQHCI 119

Query: 136 TSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            SLGL++ E++N YR VP I  K   + +  + +     +  +K      +   + F  
Sbjct: 120 ESLGLEQSEIYNRYRVVPEIYGKILLSNKRLEQVLRSDINLSDKDNLHEFIMSYIFFAA 178


>gi|253827828|ref|ZP_04870713.1| ribonucleotide-diphosphate reductase beta subunit [Helicobacter
           canadensis MIT 98-5491]
 gi|313142391|ref|ZP_07804584.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           canadensis MIT 98-5491]
 gi|253511234|gb|EES89893.1| ribonucleotide-diphosphate reductase beta subunit [Helicobacter
           canadensis MIT 98-5491]
 gi|313131422|gb|EFR49039.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           canadensis MIT 98-5491]
          Length = 341

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 48/189 (25%), Positives = 92/189 (48%), Gaps = 4/189 (2%)

Query: 7   LSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
              I       +V+++R+     + + +L  +KY WA+  +     N W P EV M  D 
Sbjct: 4   RKKIYNPSSNESVNERRIFGGNPTSIFELNKIKYQWAYNLWKVMLANSWFPEEVNMTQDK 63

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             +    GLT +E++   R L      +SL  NN++  +  ++++PE    L+RQAFEEA
Sbjct: 64  RDYAD--GLTPEEKIGYDRALAQLIFMDSLQTNNLIDNVNPYITSPEINLILVRQAFEEA 121

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSR 184
           +HS ++  ++ S+  +  E+++M+R    + AK ++  + Y Q  ++P      K   + 
Sbjct: 122 LHSQSYAVMVESISANTDEIYDMWRSDMQLKAKNDYIAEVYEQLATNPIERNIIKAMFAN 181

Query: 185 ILTRSLRFL 193
            +   + F 
Sbjct: 182 QILEGIYFY 190


>gi|224418874|ref|ZP_03656880.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           canadensis MIT 98-5491]
          Length = 340

 Score =  175 bits (445), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 48/189 (25%), Positives = 92/189 (48%), Gaps = 4/189 (2%)

Query: 7   LSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
              I       +V+++R+     + + +L  +KY WA+  +     N W P EV M  D 
Sbjct: 3   RKKIYNPSSNESVNERRIFGGNPTSIFELNKIKYQWAYNLWKVMLANSWFPEEVNMTQDK 62

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             +    GLT +E++   R L      +SL  NN++  +  ++++PE    L+RQAFEEA
Sbjct: 63  RDYAD--GLTPEEKIGYDRALAQLIFMDSLQTNNLIDNVNPYITSPEINLILVRQAFEEA 120

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSR 184
           +HS ++  ++ S+  +  E+++M+R    + AK ++  + Y Q  ++P      K   + 
Sbjct: 121 LHSQSYAVMVESISANTDEIYDMWRSDMQLKAKNDYIAEVYEQLATNPIERNIIKAMFAN 180

Query: 185 ILTRSLRFL 193
            +   + F 
Sbjct: 181 QILEGIYFY 189


>gi|145596896|ref|YP_001161193.1| ribonucleoside-diphosphate reductase [Salinispora tropica CNB-440]
 gi|145306233|gb|ABP56815.1| Ribonucleoside-diphosphate reductase [Salinispora tropica CNB-440]
          Length = 350

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 51/179 (28%), Positives = 89/179 (49%), Gaps = 7/179 (3%)

Query: 19  VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
           V ++ +L        L P++Y   ++++  A  N W   EV +  DL        L+  E
Sbjct: 15  VGERHLLLDPGMDLTLRPMRYPHFFDRFKEAIKNTWTVEEVDLHSDLGDLAK---LSSAE 71

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           R ++ R + FFA+ +++VANN+VL +Y+H+++PE R YL RQ FEEAVH   +  ++ + 
Sbjct: 72  RHLVSRLVAFFATGDTIVANNLVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNLLDTY 131

Query: 139 GLDEGELFNMY---REVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             +E E F  +     +PSI  KA +  ++  ++         +  R   L   + F  
Sbjct: 132 VPEEKERFAAFAAVENIPSIARKAEFCFRWIDSIFE-LRELRTQADRRAFLLNLICFAA 189


>gi|254492407|ref|ZP_05105579.1| ribonucleoside-diphosphate reductase, beta subunit [Methylophaga
           thiooxidans DMS010]
 gi|224462299|gb|EEF78576.1| ribonucleoside-diphosphate reductase, beta subunit [Methylophaga
           thiooxydans DMS010]
          Length = 383

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 63/182 (34%), Positives = 99/182 (54%), Gaps = 2/182 (1%)

Query: 12  AGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSK 71
              K +N DDKR++N  +D+NQL P KY WAW  +L+A  NHW P ++ M  D+  ++ K
Sbjct: 48  NNAKAINADDKRVINGEADINQLAPFKYPWAWNYFLNANKNHWTPLDINMAQDVHDYRHK 107

Query: 72  NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
             LT +ER + +  L +  +S+ L   NI LA+   ++ PE + Y  RQ +EEA+H+ T+
Sbjct: 108 --LTLEERHVYENVLSYLTTSDILAMRNIGLAVMEKMTAPELQIYQARQVYEEALHTWTY 165

Query: 132 QYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           Q+ I ++GLD+ E++N YR VP I  K   A     T+        ++      +     
Sbjct: 166 QHCIETIGLDQSEIYNRYRVVPEIHQKIKLANDRLDTVMRSDIDLRDRDELENFVMSYAF 225

Query: 192 FL 193
           F 
Sbjct: 226 FA 227


>gi|289582310|ref|YP_003480776.1| ribonucleoside-diphosphate reductase [Natrialba magadii ATCC 43099]
 gi|289531863|gb|ADD06214.1| Ribonucleoside-diphosphate reductase [Natrialba magadii ATCC 43099]
          Length = 330

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 72/169 (42%), Positives = 108/169 (63%), Gaps = 1/169 (0%)

Query: 25  LNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR 84
            +A  D N++LP+ Y WA E Y +  NN+W+P E+PMQDD++ W + + L+D ER +++ 
Sbjct: 6   TDAEHDPNKILPIDYDWAREYYEAGVNNNWVPEEIPMQDDVSQW-NGDALSDAERQLVEW 64

Query: 85  NLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE 144
           NLGFF+++ESL ANNIVLA+Y H++ PECRQYLLRQA+EEA+H+ TF Y   SLG +   
Sbjct: 65  NLGFFSTAESLTANNIVLAVYDHVTAPECRQYLLRQAYEEAIHTDTFIYCCDSLGFEPDY 124

Query: 145 LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           ++ MY  +PSI  K  + +  T+ ++   F           +   + F 
Sbjct: 125 MYGMYDRIPSIAEKDEFVIDLTRVINQNGFVIETDEDLRDFIRDLVGFY 173


>gi|317122809|ref|YP_004102812.1| ribonucleoside-diphosphate reductase [Thermaerobacter marianensis
           DSM 12885]
 gi|315592789|gb|ADU52085.1| Ribonucleoside-diphosphate reductase [Thermaerobacter marianensis
           DSM 12885]
          Length = 336

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 64/174 (36%), Positives = 94/174 (54%), Gaps = 6/174 (3%)

Query: 22  KRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
            R+L     +  QL PL+Y WA+        N W P E+P+ DD+  W+    LTDDER 
Sbjct: 10  DRLLGGDPLEPIQLFPLRYPWAYAHAQQGKRNTWFPEEIPLADDVRDWE--LRLTDDERR 67

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            ++  LGFF   ESLV +N+V++IY  L+ PE R YL RQ +EEA H+  F+Y++ +L +
Sbjct: 68  AVELLLGFFNPMESLVTHNLVMSIYPLLTPPEVRLYLARQIWEEANHTMAFEYVLKTLPV 127

Query: 141 DEGELFNMYREVPSITAKANWALQYT-QTLSSPSFHYWNKRRRSRILTRSLRFL 193
           D   +F  +R+VP+I AK  +  + T Q L  P         R   L   + + 
Sbjct: 128 DRERVFAAHRDVPAIRAKEAFQQELTRQLLVRPD--VSTLEGRQAFLRNLIGYY 179


>gi|210631890|ref|ZP_03297102.1| hypothetical protein COLSTE_00992 [Collinsella stercoris DSM 13279]
 gi|210159815|gb|EEA90786.1| hypothetical protein COLSTE_00992 [Collinsella stercoris DSM 13279]
          Length = 352

 Score =  175 bits (444), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 83/190 (43%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
            P+   +  ++V D+RM+   + ++N    +KY W    Y  A NN W+P E+ +  D+ 
Sbjct: 12  KPLFNPDGDLDVRDRRMIGGNTTNLNDFNNMKYPWVSSWYRQAMNNFWIPEEINLTQDVK 71

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +     LT  ER    + L F    +SL + N+   I  +++  E    L  QAF+E+V
Sbjct: 72  DY---PRLTAAERAAYDKILSFLVFLDSLQSANLP-NIAEYITANEVNLCLSIQAFQESV 127

Query: 127 HSHTFQYIITSL--GLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRS 183
           HS ++ Y++ ++       E+   ++    + A+  +    Y +         + +   +
Sbjct: 128 HSQSYSYMLDTICDPAKRNEILYQWKTDEPLLARNTFIGNLYNEFQERRDARTFLRVLMA 187

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 188 NFILEGVYFY 197


>gi|219126374|ref|XP_002183434.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405190|gb|EEC45134.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 296

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 6/127 (4%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            Y  A  + W   E+ +  DL  W   + L+ +ER  +   L FFA+S+ +V  N+    
Sbjct: 1   MYKKAEASFWTAEEIDLAGDLQDW---DKLSSNERHFVSHVLAFFAASDGIVNENLAGNF 57

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANW 161
              + + E R +   Q   E +HS T+  +I +   D  E   L +    VP +  KA+W
Sbjct: 58  ATEIQSAEARCFYGFQIAVENIHSETYSLLIDTYVRDAAEKDHLLHAIETVPCVQKKASW 117

Query: 162 ALQYTQT 168
           ALQ+   
Sbjct: 118 ALQWCDA 124


>gi|254456975|ref|ZP_05070403.1| ribonucleoside-diphosphate reductase, beta subunit
           [Campylobacterales bacterium GD 1]
 gi|207085767|gb|EDZ63051.1| ribonucleoside-diphosphate reductase, beta subunit
           [Campylobacterales bacterium GD 1]
          Length = 340

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 46/189 (24%), Positives = 98/189 (51%), Gaps = 5/189 (2%)

Query: 7   LSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
              I   + + NV+D+++     + + +L  +KY WA+  +    NN W P EV M  D+
Sbjct: 3   RKNIYNPDSKENVNDRKVFGGDPTGIFELNNIKYQWAYNLWEVMLNNTWFPKEVDMTRDV 62

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             +K+   LT++E+    + L      +SL  NN++  +  ++++PE    L+RQ+FEEA
Sbjct: 63  NDYKN---LTENEKTAYDKALSQLIFMDSLQTNNLIDNVNPYVTSPEINLILVRQSFEEA 119

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSR 184
           +HS ++  ++ S+  +  E+++++R    +  K +   + Y +  ++P+ H + K   + 
Sbjct: 120 LHSQSYAVMVDSISTNSAEIYDLWRRDMMLKGKNDAIARVYQELAANPTEHNFVKACFAN 179

Query: 185 ILTRSLRFL 193
            +   + F 
Sbjct: 180 QILEGIYFY 188


>gi|152989800|ref|YP_001355522.1| ribonucleotide-diphosphate reductase subunit beta [Nitratiruptor
           sp. SB155-2]
 gi|151421661|dbj|BAF69165.1| ribonucleoside-diphosphate reductase, beta subunit [Nitratiruptor
           sp. SB155-2]
          Length = 341

 Score =  175 bits (443), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 49/189 (25%), Positives = 92/189 (48%), Gaps = 5/189 (2%)

Query: 7   LSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
              I   E   +V+++++     + + +L  +KY WA+  +     N W P EV M  D 
Sbjct: 5   RKKIYNPESHESVNERKVFGGDPTGIFELNKIKYQWAYNLWEMMLANTWFPKEVDMTQDA 64

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             +K    LTD E+L   + L      +SL  NN++  +  +++ PE    L+RQAFEEA
Sbjct: 65  RDYK---LLTDAEKLAYDKVLAQLIFMDSLQTNNLIDNVNPYITAPEINLILVRQAFEEA 121

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANW-ALQYTQTLSSPSFHYWNKRRRSR 184
           +HS ++  ++ S+  +  E++ ++RE   +  K ++ A  Y +  ++PS     K   + 
Sbjct: 122 LHSQSYAVMVDSISQNTDEIYELWREDLQLKQKNDYIAHVYEELAANPSDENIVKAMFAN 181

Query: 185 ILTRSLRFL 193
            +   + F 
Sbjct: 182 QILEGIYFY 190


>gi|269963257|ref|ZP_06177590.1| hypothetical protein VME_39740 [Vibrio harveyi 1DA3]
 gi|269832005|gb|EEZ86131.1| hypothetical protein VME_39740 [Vibrio harveyi 1DA3]
          Length = 310

 Score =  174 bits (442), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 19/167 (11%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
            +   L P++Y   W+ Y +     W   E+    DLA       LT+ E+  I+  L F
Sbjct: 4   KNKFSLFPIQYEEIWQAYKTHEAAFWTTEELDFAQDLADLAK---LTEGEKHFIRHVLAF 60

Query: 89  FASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---L 145
           FA SE ++  N++   Y  +   E R +L  QAF E +H+ T+   + +   D  E   L
Sbjct: 61  FAQSEGMINENLLTRFYGEIEIAEARCFLALQAFNEVIHAETYALQLETYIPDVEERERL 120

Query: 146 FNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           FN    VP++  KA W +++  +                +  R + F
Sbjct: 121 FNAIENVPTVKRKAEWVMKWISS-------------DKTLAMRLIAF 154


>gi|291276761|ref|YP_003516533.1| ribonucleoside-diphosphate reductase subunit beta [Helicobacter
           mustelae 12198]
 gi|290963955|emb|CBG39794.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter
           mustelae 12198]
          Length = 344

 Score =  174 bits (441), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 47/189 (24%), Positives = 93/189 (49%), Gaps = 4/189 (2%)

Query: 7   LSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
              I   E   +V+D+++     + +  L  +KY WA++ + +   N W P EV M +D 
Sbjct: 8   RKKIYNPESIESVNDRKIFGGNPTSMFDLNKIKYQWAYDLWKTMLANTWFPEEVSMNEDK 67

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             +   N LT  E+L   R L      +SL  NN++  +  ++++PE    L+RQA+EEA
Sbjct: 68  RDYN--NLLTAQEKLGYDRALAQLIFMDSLQTNNLIDNVNPYITSPEINLILVRQAYEEA 125

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSR 184
           +HS ++  ++ S+  +  E+++M+R    + +K ++    Y +   +P+     K   + 
Sbjct: 126 LHSQSYAVMVESISANTDEIYDMWRVDMQLKSKNDYIANVYMKLAQNPTERNIVKAMFAN 185

Query: 185 ILTRSLRFL 193
            +   + F 
Sbjct: 186 QILEGIYFY 194


>gi|332018842|gb|EGI59398.1| Ribonucleoside-diphosphate reductase subunit M2 [Acromyrmex
           echinatior]
          Length = 176

 Score =  174 bits (441), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 36/145 (24%), Positives = 63/145 (43%), Gaps = 3/145 (2%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           ++ + GL      ++  N   + +L    +   + P++Y   W+ Y  A  + W   EV 
Sbjct: 33  ISQDHGLKNGVQLKEDFNPKLEPLLQEGPNRFVIFPIQYPDIWDMYKKAVASFWTIEEVS 92

Query: 61  MQ-DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLR 119
           +   D   W  K  L  DE+  I   L FFA+S+ +V  N++    + +  PE R +   
Sbjct: 93  LHKQDKKDWNEK--LNSDEKRFISHVLAFFAASDGIVNENLIEKFSQEVKIPEARCFYGF 150

Query: 120 QAFEEAVHSHTFQYIITSLGLDEGE 144
           Q   E +HS  +  +I +   D  E
Sbjct: 151 QIAIENIHSEMYSLLIETYISDPKE 175


>gi|238023979|ref|YP_002908211.1| Ribonucleotide reductase subunit beta [Burkholderia glumae BGR1]
 gi|237878644|gb|ACR30976.1| Ribonucleotide reductase, beta subunit [Burkholderia glumae BGR1]
          Length = 337

 Score =  174 bits (441), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 65/180 (36%), Positives = 99/180 (55%), Gaps = 2/180 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   V+DKR++N   D+NQL P +Y WAWE +LSA  NHW P E+ M DD+  +  +  L
Sbjct: 5   KPARVEDKRVVNGAGDINQLAPFRYAWAWECFLSANKNHWTPLEISMSDDVHDFHHR--L 62

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           +  E+ + +  L +  +S+ L   NI LA+   ++ PE + Y  RQ +EEA+H+ T+Q+ 
Sbjct: 63  SPAEKHVFENVLAYLTTSDILAMRNIGLAVMEKMTAPELQIYQARQVYEEALHTWTYQHC 122

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           I SLGLD+ E++N YR VP I AK   + +    +  P     ++          L F  
Sbjct: 123 IESLGLDQQEIYNRYRVVPQIHAKIALSNRRLNRMLEPGLDLHDRDTLHEFALAYLFFAA 182


>gi|229816571|ref|ZP_04446870.1| hypothetical protein COLINT_03629 [Collinsella intestinalis DSM
           13280]
 gi|229807906|gb|EEP43709.1| hypothetical protein COLINT_03629 [Collinsella intestinalis DSM
           13280]
          Length = 352

 Score =  174 bits (441), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 83/195 (42%), Gaps = 8/195 (4%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
                 P+      ++V D+RM+   + ++N    +KY W    Y  A NN W+P E+ +
Sbjct: 7   QTLVKKPLFNPNGDLDVRDRRMIGGNTTNLNDFNNMKYPWVSSWYRQAMNNFWIPEEINL 66

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D+  +     L++ ER    + L F    +SL + N+   I  +++  E    L  QA
Sbjct: 67  TQDVKDY---PRLSEAERAAYDKILSFLVFLDSLQSANLP-NIAEYITANEVNLCLSIQA 122

Query: 122 FEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWN 178
           F+E+VHS ++ Y++ ++       E+   ++    + A+  +    Y +         + 
Sbjct: 123 FQESVHSQSYSYMLDTICDPAKRNEILYQWKTDKHLLARNTFIGDLYNEFQEHRDARTFL 182

Query: 179 KRRRSRILTRSLRFL 193
           +   +  +   + F 
Sbjct: 183 RVLMANYILEGVYFY 197


>gi|170587050|ref|XP_001898292.1| ribonucleotide reductase 2 [Brugia malayi]
 gi|158594687|gb|EDP33271.1| ribonucleotide reductase 2, putative [Brugia malayi]
          Length = 288

 Score =  173 bits (440), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 3/139 (2%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           G         R   + + +L    +   + P+K+   W+ Y  A  + W   EV +  D 
Sbjct: 30  GTYETATTTVRYESNGEILLAENPNRFVIFPIKFHDIWDFYKKALASFWTVDEVDLSKDY 89

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             W++   L D ER  I R L FFA+S+ +V  N+V    + +  PE R +   Q   E 
Sbjct: 90  RDWEN---LNDGERHFISRVLAFFAASDGIVNENLVNRFSQEVQVPEARFFYGFQIMIEN 146

Query: 126 VHSHTFQYIITSLGLDEGE 144
           +HS  +  +I +   D+ +
Sbjct: 147 IHSEMYSKMIDTYIRDQKQ 165


>gi|32266105|ref|NP_860137.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           hepaticus ATCC 51449]
 gi|32262154|gb|AAP77203.1| ribonucleoside diphosphate reductase [Helicobacter hepaticus ATCC
           51449]
          Length = 349

 Score =  173 bits (440), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 49/190 (25%), Positives = 89/190 (46%), Gaps = 4/190 (2%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
               I   E   +V D+++     + +  L  +KY WA+  +     N W P EV M  D
Sbjct: 11  SRKQIYNPESTESVADRKIFGGNPTSMFDLNKIKYQWAYNLWKVMLANTWFPEEVNMTPD 70

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
              +    GLT  E+L   R L      +SL  NN++  +  ++++PE    L+RQA+EE
Sbjct: 71  KRDYN--GGLTAQEKLGYDRALAQLIFMDSLQTNNLIDNVNPYITSPEINLILVRQAYEE 128

Query: 125 AVHSHTFQYIITSLGLDEGELFNMYREVPSITAKAN-WALQYTQTLSSPSFHYWNKRRRS 183
           A+HS ++  ++ S+  +  E++NM+R    + +K +  A  Y +   +P+     K   +
Sbjct: 129 ALHSQSYAVMVESISANTDEIYNMWRVDMQLRSKNDNIANVYIELAKNPNEQNLLKAMFA 188

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 189 NQILEGIYFY 198


>gi|254517517|ref|ZP_05129573.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium sp.
           7_2_43FAA]
 gi|226911266|gb|EEH96467.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium sp.
           7_2_43FAA]
          Length = 344

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
            P+           KRM+N  + ++N    +KY W  + Y  A NN W+P E+ +  DL 
Sbjct: 6   KPLFNEFGDTETSKKRMINGNTTNLNDFNNMKYTWVSDWYRQAMNNFWIPEEINLAQDLK 65

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +   N LT+DER    + L F    +S+   N+   I  +++  E    L  QAF+EAV
Sbjct: 66  DY---NKLTNDERTAYDKILSFLIFLDSIQTANL-SNINNYITASEVNLCLTIQAFQEAV 121

Query: 127 HSHTFQYIITSLGLDEG--ELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRS 183
           HS ++ Y++ ++   E   E+   +++   +  +  +  + Y   L +P+     K   +
Sbjct: 122 HSQSYSYMLDTICSPEKRNEILYQWKDDKILLERNKFIGELYNNFLEAPTQENLIKTIMA 181

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 182 NYILEGIYFY 191


>gi|307719930|ref|YP_003891070.1| Ribonucleoside-diphosphate reductase [Sulfurimonas autotrophica DSM
           16294]
 gi|306978023|gb|ADN08058.1| Ribonucleoside-diphosphate reductase [Sulfurimonas autotrophica DSM
           16294]
          Length = 340

 Score =  173 bits (439), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 47/189 (24%), Positives = 92/189 (48%), Gaps = 5/189 (2%)

Query: 7   LSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
              I   +   NV+D+++     + + +L  +KY WA+  +    NN W P EV M  D+
Sbjct: 3   RKQIYNPDSTENVNDRKVFGGNPTGIFELNNIKYQWAYNLWEMMLNNTWFPKEVDMTRDV 62

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             +K    LTD E+    + L      +SL  NN++  +  +++ PE    L+RQ+FEEA
Sbjct: 63  NDYKQ---LTDAEKTAYDKALSQLIFMDSLQTNNLIDNVNPYVTAPEINLILVRQSFEEA 119

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKAN-WALQYTQTLSSPSFHYWNKRRRSR 184
           +HS ++  ++ S+  +  E+++++R    +  K +  A  Y +   +P+   + K   + 
Sbjct: 120 LHSQSYAVMVDSISTNSEEIYDLWRRDMMLKHKNDTIAAVYQELAKNPTDSNFVKACFAN 179

Query: 185 ILTRSLRFL 193
            +   + F 
Sbjct: 180 QILEGIYFY 188


>gi|224438210|ref|ZP_03659145.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           cinaedi CCUG 18818]
 gi|313144656|ref|ZP_07806849.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           cinaedi CCUG 18818]
 gi|313129687|gb|EFR47304.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           cinaedi CCUG 18818]
          Length = 348

 Score =  173 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 48/194 (24%), Positives = 89/194 (45%), Gaps = 4/194 (2%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
             N     I   E + +V D+++     + +  L  +KY WA+  + +   N W P EV 
Sbjct: 6   PQNIERKKIYNPESKESVKDRKIFGGNPTSMFDLNKIKYQWAYNLWKTMLANTWFPEEVN 65

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           +  D   +    GLT  E+    R L      +SL  NN++  +  ++++PE    L+RQ
Sbjct: 66  LNGDKRDYAD--GLTAQEKAGYDRALAQLIFMDSLQTNNLIDNVNPYITSPEINLILVRQ 123

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKAN-WALQYTQTLSSPSFHYWNK 179
           AFEEA+HS ++  ++ S+  +  E++ M+R    + +K +  A  Y +    P+     K
Sbjct: 124 AFEEALHSQSYAVMVESISANTDEIYEMWRVDMQLRSKNDHIANVYIELGKQPTEQNLLK 183

Query: 180 RRRSRILTRSLRFL 193
              +  +   + F 
Sbjct: 184 ALFANQILEGIYFY 197


>gi|237752265|ref|ZP_04582745.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           winghamensis ATCC BAA-430]
 gi|229376507|gb|EEO26598.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           winghamensis ATCC BAA-430]
          Length = 343

 Score =  173 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 47/189 (24%), Positives = 92/189 (48%), Gaps = 4/189 (2%)

Query: 7   LSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
              I     + +V+++R+     + + +L  +KY WA+  +     N W P EV M  D 
Sbjct: 6   RKKIYNPNSKESVNERRIFGGNPTSIFELNKIKYQWAYNLWKVMLANSWFPEEVNMTQDK 65

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             +    GLT +E++   R L      +SL  NN++  +  ++++PE    L+RQAFEEA
Sbjct: 66  RDYSD--GLTPEEKIGYDRALAQLIFMDSLQTNNLIDNVNPYITSPEINLILVRQAFEEA 123

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLS-SPSFHYWNKRRRSR 184
           +HS ++  ++ S+  +  E++ M+R    + +K ++     + LS +P+     K   + 
Sbjct: 124 LHSQSYAVMVESISANTDEIYEMWRTDIQLKSKNDYIANVYEELSVNPTESILLKAMFAN 183

Query: 185 ILTRSLRFL 193
            +   + F 
Sbjct: 184 QILEGIYFY 192


>gi|325663145|ref|ZP_08151595.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 4_1_37FAA]
 gi|325470599|gb|EGC73829.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 4_1_37FAA]
          Length = 347

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 83/190 (43%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
            P+        V  +R++   + ++N    +KY W  + Y  A NN W+P E+ +  D+ 
Sbjct: 7   KPLFNPAGDTEVRLRRIVGGNTTNLNDFNNMKYSWVSDWYRQAMNNFWIPEEINLGADVR 66

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +++   L   ER    + L F    +S+   N+   I  +++  E    L  QAF+EAV
Sbjct: 67  DYRT---LPAPERRAYDKILSFLVFLDSIQTANLP-NISEYITANEVNLCLSIQAFQEAV 122

Query: 127 HSHTFQYIITSLGLD--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRS 183
           HS ++ Y++ ++       E+   +++ P + ++  +    Y +     S   + +   +
Sbjct: 123 HSQSYSYMLDTICEPQERNEVLYQWKDDPHLLSRNEFIGNLYNEFQREKSLEAFVRTMIA 182

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 183 NYILEGIYFY 192


>gi|313768143|ref|YP_004061574.1| hypothetical protein BpV1_144c [Bathycoccus sp. RCC1105 virus BpV1]
 gi|312599750|gb|ADQ91771.1| hypothetical protein BpV1_144c [Bathycoccus sp. RCC1105 virus BpV1]
          Length = 387

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 19/179 (10%)

Query: 19  VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
            + + ML        + P+++   W  Y  A  ++W   E+    D+  W   N L+D+E
Sbjct: 70  EESEPMLLPTLSRFTVFPIEHENLWTLYKKAQMSNWTAEEIDFSKDMDDW---NELSDNE 126

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           +  IK  L FFA S+ +V  NI       +   E R +   Q+  E VH  T+  +I   
Sbjct: 127 KHFIKYILAFFAGSDGIVFENINNNFADEIQLTEARSFYAYQSHNEMVHGETYSKLIDKY 186

Query: 139 GLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             +  E   LF   + +P I  KA WA+++               ++     R L F C
Sbjct: 187 IKNSSEKKQLFEAIQTIPCIERKAKWAMKWF-------------DKKRPFAERLLAFAC 232


>gi|325119319|emb|CBZ54873.1| hypothetical protein NCLIV_052980 [Neospora caninum Liverpool]
          Length = 392

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 19/182 (10%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           +    ++ +L A      +LP+++   WE Y     + W   E+ +  D+  W+S   L 
Sbjct: 68  KEKESEEPLLIANPRRWVILPIQHHAIWEMYKKQEASFWTAEEIDLAQDMTHWES---LN 124

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
            +E+  IK  L FFA+S+ +V  N+       +  PE R +   Q   E +HS T+  +I
Sbjct: 125 SNEKHFIKYVLAFFAASDGIVLENLAEKFLSEIQIPEARAFYGFQIAMENIHSETYSLLI 184

Query: 136 TSLGLDEG---ELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
                DE    ELF+    V ++  KA WA  +                R+    R + F
Sbjct: 185 DQYIRDEKEKMELFDAVHNVKAVAVKAAWAAMWIN-------------NRNCFAERLVGF 231

Query: 193 LC 194
            C
Sbjct: 232 AC 233


>gi|78776214|ref|YP_392529.1| ribonucleotide-diphosphate reductase subunit beta [Sulfurimonas
           denitrificans DSM 1251]
 gi|78496754|gb|ABB43294.1| Ribonucleoside-diphosphate reductase [Sulfurimonas denitrificans
           DSM 1251]
          Length = 340

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 50/189 (26%), Positives = 95/189 (50%), Gaps = 5/189 (2%)

Query: 7   LSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
              I   E   NV+D+R+     + + +L  +KY WA+  +    NN W P EV M  D+
Sbjct: 3   RKKIYNPESNENVNDRRIFGGNPTGIFELNDIKYQWAYNLWEMMLNNTWFPKEVDMTRDV 62

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           + +K    +TD E+    + L      +SL  NNI+  I  ++++PE    L+RQA+EEA
Sbjct: 63  SDYKQ---ITDVEKASYDKALAQLIFMDSLQTNNIMDNINPYVTSPEINLILVRQAYEEA 119

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLS-SPSFHYWNKRRRSR 184
           +HS ++  ++ ++  +  E++ ++R    +  K +   +  + LS +P+ H + K   + 
Sbjct: 120 LHSQSYAVMVDTISTNSKEIYELWRRDMMLKGKNDAIARVYEELSKNPTEHNFVKACFAN 179

Query: 185 ILTRSLRFL 193
            +   + F 
Sbjct: 180 QILEGIYFY 188


>gi|225873704|ref|YP_002755163.1| ribonucleoside-diphosphate reductase, beta subunit [Acidobacterium
           capsulatum ATCC 51196]
 gi|225791613|gb|ACO31703.1| ribonucleoside-diphosphate reductase, beta subunit [Acidobacterium
           capsulatum ATCC 51196]
          Length = 340

 Score =  172 bits (436), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 6/165 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
            L P++Y   ++ +     N W   EV  Q DL   K +  L+  E  +I+R + FFA+ 
Sbjct: 18  TLRPMRYPVFYDMFRDGIKNTWTVEEVDFQTDLVDLKQR--LSPAEVHLIQRLVAFFATG 75

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNM---Y 149
           +S+V+NN+VL +Y+H+++PE R YL RQ +EEAVH   +  ++ +   D           
Sbjct: 76  DSIVSNNLVLNLYKHINSPEARLYLSRQLYEEAVHVQFYLTLLDNYVPDPEARAAAFAAV 135

Query: 150 REVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             +PSI+ KA++ +++  ++         +  R + L   + F  
Sbjct: 136 ENIPSISKKADFCMKWMDSIQQLD-ELKTREHRRQFLLNLICFAA 179


>gi|66475262|ref|XP_627447.1| ribonucleotide reductase small subunit, duplicated adjacent gene
           [Cryptosporidium parvum Iowa II]
 gi|9652154|gb|AAF91416.1|AF275635_1 ribonucleotide reductase R2 subunit [Cryptosporidium parvum]
 gi|46228920|gb|EAK89769.1| ribonucleotide reductase small subunit, duplicated adjacent gene
           [Cryptosporidium parvum Iowa II]
          Length = 352

 Score =  171 bits (435), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 47/193 (24%), Positives = 80/193 (41%), Gaps = 12/193 (6%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           +   +  +    K   V++  +  +R + N+L  L     W  Y  A  + W+  E+ + 
Sbjct: 16  DEENIEKLVNEVKINQVNEPMLKYSRENRNELKELI-KDIWSMYKKAEASFWVTEEIDLS 74

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D   W+S   L D ER  IK  L FFA+S+ +V  N+ +   R +  PE R Y   Q  
Sbjct: 75  QDTRDWES---LKDPERHFIKYVLAFFAASDGIVMENLAVNFLREIQIPEARMYYAFQMS 131

Query: 123 EEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNK 179
            E +HS T+  +I     +  E   LF     + ++  KA WA ++  +        + +
Sbjct: 132 IEQIHSETYSLLIDRYITEIKERQMLFEAISHIEAVKKKAEWATKWMNS-----ERSFAE 186

Query: 180 RRRSRILTRSLRF 192
           R         + F
Sbjct: 187 RIIGFCAVEGILF 199


>gi|15896521|ref|NP_349870.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           acetobutylicum ATCC 824]
 gi|15026352|gb|AAK81210.1|AE007823_4 Ribonucleotide reductase beta subunit [Clostridium acetobutylicum
           ATCC 824]
 gi|325510679|gb|ADZ22315.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           acetobutylicum EA 2018]
          Length = 344

 Score =  171 bits (435), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 43/189 (22%), Positives = 83/189 (43%), Gaps = 8/189 (4%)

Query: 9   PIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           P+           K+++N  + ++N    +KY W  + Y    NN W+P E+ +  DL  
Sbjct: 7   PLFNENGDTETSKKKIVNGNTTNLNDFNNMKYTWVSDWYRQGMNNFWIPEEINLSQDLKD 66

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           +     LTD+ER    + L F    +S+   N+   I  +++  E    L  QAF+EAVH
Sbjct: 67  Y---GKLTDNERTAYDKILSFLIFLDSVQTANLG-NINDYITASEVNLCLTIQAFQEAVH 122

Query: 128 SHTFQYIITSLGLDEG--ELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSR 184
           S ++ Y++ ++   E   E+   +++   + ++  +    Y   +  PS   + K     
Sbjct: 123 SQSYSYMLDTICSPEKRNEILFQWKDDEVLLSRNKFIGDIYNNFVEEPSDENFLKAIMGN 182

Query: 185 ILTRSLRFL 193
            +   + F 
Sbjct: 183 YVLEGIYFY 191


>gi|160915703|ref|ZP_02077911.1| hypothetical protein EUBDOL_01712 [Eubacterium dolichum DSM 3991]
 gi|158432179|gb|EDP10468.1| hypothetical protein EUBDOL_01712 [Eubacterium dolichum DSM 3991]
          Length = 353

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 43/196 (21%), Positives = 88/196 (44%), Gaps = 8/196 (4%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           A N    P+      ++V  ++M+N  + ++N    +KY WA + Y  A NN W+P E+ 
Sbjct: 7   AMNLQRKPLFNEHGDIDVHLRKMINGNTTNLNDFNHMKYTWASDWYRQAMNNFWIPEEIN 66

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           +  D+  ++    L+  E+    + L F    +S+   N+   I  +++  E    L  Q
Sbjct: 67  LNQDVKDYRK---LSKAEKDAYDKTLSFLIFLDSIQTANLP-NIGEYITANEVNLCLTIQ 122

Query: 121 AFEEAVHSHTFQYIITSLGLDEGE--LFNMYREVPSITAKANWALQ-YTQTLSSPSFHYW 177
           AF+EAVHS ++ Y++ S+   +    +   +++ P + A+  +    Y   +      + 
Sbjct: 123 AFQEAVHSQSYSYMLDSICSPQERNAILYQWKDDPHLLARNKFIGDLYNDFMEHRDGEHL 182

Query: 178 NKRRRSRILTRSLRFL 193
            K   +  +   + F 
Sbjct: 183 IKTLIANYILEGIYFY 198


>gi|187932511|ref|YP_001884520.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           botulinum B str. Eklund 17B]
 gi|187720664|gb|ACD21885.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum B str. Eklund 17B]
          Length = 344

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 44/190 (23%), Positives = 87/190 (45%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
            P+       +   KR++N  + ++N    +KY WA + Y    NN W+P E+ +  DL 
Sbjct: 6   KPLFNEFGDRDPRLKRVINGNTTNLNDFNNMKYTWASDWYRQGMNNFWIPEEINLAQDLK 65

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +K    L  DER    + L F    +S+   N+   I  +++  E    L  Q+F+EAV
Sbjct: 66  DYKK---LLPDERTAYDKILSFLIFLDSIQTANL-SNINSYITASEINLCLTIQSFQEAV 121

Query: 127 HSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRS 183
           HS ++ Y++ S+   E   E+   +++   +  +  +    Y + +++P+ +   K   +
Sbjct: 122 HSQSYSYMLDSICSPEERNEILYQWKDDEILLKRNKFIGDLYNEFINNPNEYNLIKTLMA 181

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 182 NYILEGIYFY 191


>gi|258648774|ref|ZP_05736243.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           tannerae ATCC 51259]
 gi|260851104|gb|EEX70973.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           tannerae ATCC 51259]
          Length = 350

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 80/191 (41%), Gaps = 8/191 (4%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
             P+           KRM+N  + ++N    +KY W  + Y  A NN W+P E+ +  DL
Sbjct: 9   RKPLFNEHGDTETAKKRMINGNTTNLNDFNNMKYKWVSDWYRQAMNNFWIPEEINLGQDL 68

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             +   + L   ER    + L F    +S+   N+   +  +++  E    L  Q F+EA
Sbjct: 69  KDY---SKLLPAERTAYDKILSFLIFLDSIQTANLP-NVSEYITASEVNLCLNIQTFQEA 124

Query: 126 VHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           VHS ++ Y++ ++   E    +   ++  P +  +  +    Y   ++  S   + K   
Sbjct: 125 VHSQSYSYMLDTICSPEERDAILFQWKNDPILLNRNKFIGDLYNAFMNDRSTFQFMKVLV 184

Query: 183 SRILTRSLRFL 193
           +  +   + F 
Sbjct: 185 ANYILEGIYFY 195


>gi|331086748|ref|ZP_08335825.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 9_1_43BFAA]
 gi|330409914|gb|EGG89349.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 9_1_43BFAA]
          Length = 347

 Score =  171 bits (434), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 83/190 (43%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
            P+        V  +R++   + ++N    +KY W  + Y  A NN W+P E+ +  D+ 
Sbjct: 7   KPLFNPAGDTEVRLRRIVGGNTTNLNDFNNMKYSWVSDWYRQAMNNFWIPEEINLGADVR 66

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +++   L   ER    + L F    +S+   N+   I  +++  E    L  QAF+EAV
Sbjct: 67  DYRT---LPAPERRAYDKILSFLVFLDSIQTANLP-NISEYITANEVNLCLSIQAFQEAV 122

Query: 127 HSHTFQYIITSLGLD--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRS 183
           HS ++ Y++ ++       ++   +++ P + ++  +    Y +     S   + +   +
Sbjct: 123 HSQSYSYMLDTICEPQERNKVLYQWKDDPHLLSRNEFIGNLYNEFQREKSLEAFVRTMIA 182

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 183 NYILEGIYFY 192


>gi|332180128|gb|AEE15816.1| ribonucleotide reductase [Treponema brennaborense DSM 12168]
          Length = 346

 Score =  171 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 77/189 (40%), Gaps = 8/189 (4%)

Query: 9   PIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           P+   +   +V  + M+   + ++N    +KY W  + Y  A NN W+P E+ +  D   
Sbjct: 7   PLFNPDGDADVRLRSMVGGNTTNLNDFNNMKYQWVSDWYRQAMNNFWIPEEINLSQDTKD 66

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           +     L + ER    + L F    +S+   N+   +  +++  E    L  Q F+E VH
Sbjct: 67  Y---PHLDEAERTAYDKILSFLIFLDSIQTANLP-NVGEYITANEVNLCLSIQTFQECVH 122

Query: 128 SHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA-LQYTQTLSSPSFHYWNKRRRSR 184
           S ++ Y++ ++   E   E+   ++    +  +  +    Y        F  + K   + 
Sbjct: 123 SQSYSYMLDTICSPEQRNEILYQWKTDERLLKRNTFIGGCYNDFQEHKDFFRFMKVLIAN 182

Query: 185 ILTRSLRFL 193
            +   + F 
Sbjct: 183 YILEGIYFY 191


>gi|19703451|ref|NP_603013.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|19713529|gb|AAL94312.1| Ribonucleoside-diphosphate reductase beta chain [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
          Length = 348

 Score =  171 bits (433), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 46/198 (23%), Positives = 89/198 (44%), Gaps = 8/198 (4%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEV 59
           M        +   E    ++ ++++    +++  L  ++Y WA + Y +   N W+P +V
Sbjct: 1   MKAAVDRKKLFNPEGDDTLNARKIIKGNSTNLFNLNNVRYQWANQLYRTMMANFWIPEKV 60

Query: 60  PMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLR 119
            +  D   +++   LT  ER      L F    +S+  NNI   I  H++ PE    L  
Sbjct: 61  DLTQDKNDYEN---LTVPEREAYDGILSFLIFLDSIQTNNIP-NISDHVTAPEVNLLLAI 116

Query: 120 QAFEEAVHSHTFQYIITSLGLDEGE--LFNMYREVPSITAKANWALQ-YTQTLSSPSFHY 176
           Q F+EA+HS ++QYII S+   +    +++ +R+   +  + ++  + Y   +   S   
Sbjct: 117 QTFQEAIHSQSYQYIIESILPKQSRDLIYDKWRDDKVLFERNSFIAKIYQDFIDEQSDEN 176

Query: 177 WNKRRRSRILTRSLRFLC 194
           + K   +  L  SL F  
Sbjct: 177 FAKVIIANYLLESLYFYN 194


>gi|15791173|ref|NP_280997.1| ribonucleotide-diphosphate reductase subunit beta [Halobacterium
           sp. NRC-1]
 gi|169236929|ref|YP_001690129.1| ribonucleotide-diphosphate reductase subunit beta [Halobacterium
           salinarum R1]
 gi|10581791|gb|AAG20477.1| ribonucleoside reductase small chain [Halobacterium sp. NRC-1]
 gi|167727995|emb|CAP14783.1| ribonucleoside-diphosphate reductase beta subunit [Halobacterium
           salinarum R1]
          Length = 331

 Score =  171 bits (433), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 75/168 (44%), Positives = 102/168 (60%), Gaps = 1/168 (0%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
           +A  D N++LP+ Y WA E Y     N+W P EV MQ D++ W   N LTD ER +++ N
Sbjct: 7   DAEHDPNKILPIDYDWAREYYQQGVANNWTPEEVAMQGDISQW-QGNELTDAERQLVEWN 65

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL 145
           LGFF+++ESL ANNIVLAIY +++ PECRQYLLRQA+EEAVH+ TF Y   SLG D   +
Sbjct: 66  LGFFSTAESLTANNIVLAIYEYVTAPECRQYLLRQAYEEAVHTDTFIYCCDSLGFDPEHM 125

Query: 146 FNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           + MY  +PSI  K  + +  T+ +   +F           L   + F 
Sbjct: 126 YGMYDRIPSIAEKDEFVVGLTRAVDDQAFTIDTDDDLRDFLRDLVGFY 173


>gi|163801385|ref|ZP_02195284.1| ribonucleoside-diphosphate reductase 1, beta subunit [Vibrio sp.
           AND4]
 gi|159174874|gb|EDP59674.1| ribonucleoside-diphosphate reductase 1, beta subunit [Vibrio sp.
           AND4]
          Length = 310

 Score =  170 bits (432), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 19/167 (11%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
            +   L P++Y   W+ Y +     W   E+    DL        LT+ E+  I+  L F
Sbjct: 4   KNKFSLFPIQYEEIWQAYKTHEAAFWTTEELDFAQDLPD---LVKLTEGEKHFIRHVLAF 60

Query: 89  FASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---L 145
           FA SE ++  N++   Y  +   E R +L  QAF E +H+ T+   + +   D  E   L
Sbjct: 61  FAQSEGMINENLLTRFYGEIEIAEARCFLALQAFNEVIHAETYALQLETYIPDVEERERL 120

Query: 146 FNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           FN    VP++  KA W +++  +                +  R + F
Sbjct: 121 FNAIENVPTVQRKAQWVMKWISS-------------DKPLAMRLIAF 154


>gi|256027986|ref|ZP_05441820.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium sp.
           D11]
          Length = 348

 Score =  170 bits (432), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 45/192 (23%), Positives = 88/192 (45%), Gaps = 8/192 (4%)

Query: 7   LSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
              +   E    ++ ++++    +++  L  ++Y WA + Y +   N W+P +V +  D 
Sbjct: 7   RKKLFNPEGDDTLNSRKIIKGNSTNLFNLNNVRYQWANQLYRTMMANFWIPEKVDLTQDK 66

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             +++   LT  ER      L F    +S+  NNI   I  H++ PE    L  Q F+EA
Sbjct: 67  NDYEN---LTVPEREAYDGILSFLIFLDSIQTNNIP-NISDHVTAPEVNLLLAIQTFQEA 122

Query: 126 VHSHTFQYIITSLGLDEGE--LFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           +HS ++QYII S+   +    +++ +R+   +  + ++  + Y   +   S   + K   
Sbjct: 123 IHSQSYQYIIESILPKQSRDLIYDKWRDDKVLFERNSFIAKIYQDFIDEQSDENFAKVII 182

Query: 183 SRILTRSLRFLC 194
           +  L  SL F  
Sbjct: 183 ANYLLESLYFYN 194


>gi|188588149|ref|YP_001919720.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           botulinum E3 str. Alaska E43]
 gi|251778737|ref|ZP_04821657.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
 gi|188498430|gb|ACD51566.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum E3 str. Alaska E43]
 gi|243083052|gb|EES48942.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
          Length = 344

 Score =  170 bits (431), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 43/190 (22%), Positives = 87/190 (45%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
            P+       +   KR++N  + ++N    +KY WA + Y    NN W+P E+ +  DL 
Sbjct: 6   KPLFNEFGDRDPRLKRVINGNTTNLNDFNNMKYTWASDWYRQGMNNFWIPEEINLAQDLK 65

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +K    L  +ER    + L F    +S+   N+   I  +++  E    L  Q+F+EAV
Sbjct: 66  DYKK---LLPEERTAYDKILSFLIFLDSIQTANL-SNINSYITASEINLCLTIQSFQEAV 121

Query: 127 HSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRS 183
           HS ++ Y++ S+   E   E+   +++   +  +  +    Y + +++P+ +   K   +
Sbjct: 122 HSQSYSYMLDSICSPEERNEILYQWKDDEILLKRNKFIGDLYNEFINNPNEYNLIKTLMA 181

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 182 NYILEGIYFY 191


>gi|291461082|ref|ZP_06026838.2| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           periodonticum ATCC 33693]
 gi|291379059|gb|EFE86577.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           periodonticum ATCC 33693]
          Length = 348

 Score =  170 bits (431), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 46/198 (23%), Positives = 89/198 (44%), Gaps = 8/198 (4%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEV 59
           M        +   E    ++ ++++    +++  L  ++Y WA + Y +   N W+P +V
Sbjct: 1   MKAVVDRKKLFNPEGDDTLNARKIIKGNSTNLFNLNNVRYQWANQLYRTMMANFWIPEKV 60

Query: 60  PMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLR 119
            +  D   +++   LT  ER      L F    +S+  NNI   I  H++ PE    L  
Sbjct: 61  DLTQDKNDYEN---LTLPEREAYDGILSFLIFLDSIQTNNIP-NISDHVTAPEVNMLLAI 116

Query: 120 QAFEEAVHSHTFQYIITSLGLDEGE--LFNMYREVPSITAKANWALQ-YTQTLSSPSFHY 176
           Q F+EA+HS ++QYII S+   +    +++ +R+   +  + ++  + Y   +   S   
Sbjct: 117 QTFQEAIHSQSYQYIIESILPKQSRDLIYDKWRDDKVLFERNSFIAKIYQDFIDEQSDEN 176

Query: 177 WNKRRRSRILTRSLRFLC 194
           + K   +  L  SL F  
Sbjct: 177 FAKVIIANYLLESLYFYN 194


>gi|227871657|ref|ZP_03990072.1| ribonucleoside-diphosphate reductase [Oribacterium sinus F0268]
 gi|227842499|gb|EEJ52714.1| ribonucleoside-diphosphate reductase [Oribacterium sinus F0268]
          Length = 347

 Score =  170 bits (431), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 87/191 (45%), Gaps = 8/191 (4%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
             P+   E  ++V ++RM+N  + ++N    ++Y W  + Y  A NN W+P E+ +  D 
Sbjct: 6   RKPLFNPEGDIDVRNRRMINFNTTNINDFNNMRYEWVSDWYRQAMNNFWVPEEINLNQDK 65

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           + +     L++ ER    + L F    +SL + N+   I ++++  E    L  Q F+E 
Sbjct: 66  SDY---PKLSEAERRAYDKILSFLVYLDSLQSANLP-NISQYVTANEVNLCLSIQTFQEC 121

Query: 126 VHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           +HS ++ Y++ ++    +  ++   ++    +  +  +    Y + +   S   + +   
Sbjct: 122 IHSQSYSYMLDTICNPTERNDILYQWKTDEHLLRRNEFIGNLYNEFVEKQSKDSFLRVCI 181

Query: 183 SRILTRSLRFL 193
           +  +   + F 
Sbjct: 182 ANFILEGIYFY 192


>gi|296329016|ref|ZP_06871523.1| ribonucleotide-diphosphate reductase beta subunit [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
 gi|296153909|gb|EFG94720.1| ribonucleotide-diphosphate reductase beta subunit [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
          Length = 348

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 46/198 (23%), Positives = 89/198 (44%), Gaps = 8/198 (4%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEV 59
           M        +   E    ++ ++++    +++  L  ++Y WA + Y +   N W+P +V
Sbjct: 1   MKAAVDRKKLFNPEGDDTLNARKIIKGNSTNLFNLNNVRYQWANQLYRTMMANFWIPEKV 60

Query: 60  PMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLR 119
            +  D   +++   LT  ER      L F    +S+  NNI   I  H++ PE    L  
Sbjct: 61  DLTQDKNDYEN---LTVPEREAYDGILSFLIFLDSIQTNNIP-NISDHVTAPEVNLLLAI 116

Query: 120 QAFEEAVHSHTFQYIITSLGLDEGE--LFNMYREVPSITAKANWALQ-YTQTLSSPSFHY 176
           Q F+EA+HS ++QYII S+   +    +++ +R+   +  + ++  + Y   +   S   
Sbjct: 117 QTFQEAIHSQSYQYIIESILPKQSRDLIYDKWRDDKVLFERNSFIAKIYQDFIDEQSDEN 176

Query: 177 WNKRRRSRILTRSLRFLC 194
           + K   +  L  SL F  
Sbjct: 177 FAKIIIANYLLESLYFYN 194


>gi|294784669|ref|ZP_06749957.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_27]
 gi|294486383|gb|EFG33745.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_27]
          Length = 344

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 46/192 (23%), Positives = 88/192 (45%), Gaps = 8/192 (4%)

Query: 7   LSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
              +   E    ++ +R++    +++  L  ++Y WA + Y +   N W+P +V +  D 
Sbjct: 3   RKKLFNPEGDDTLNARRIIKGNSTNLFNLNNVRYQWANQLYRTMMANFWIPEKVDLTQDK 62

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             +++   LT  ER      L F    +S+  NNI   I  H++ PE    L  Q F+EA
Sbjct: 63  NDYEN---LTVPEREAYDGILSFLIFLDSIQTNNIP-NISDHVTAPEVNLLLAIQTFQEA 118

Query: 126 VHSHTFQYIITSLGLDEGE--LFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           +HS ++QYII S+   +    +++ +R+   +  + ++  + Y   +   S   + K   
Sbjct: 119 IHSQSYQYIIESILPKQSRDLIYDKWRDDKVLFERNSFIAKIYQDFIDEQSDENFAKVII 178

Query: 183 SRILTRSLRFLC 194
           +  L  SL F  
Sbjct: 179 ANYLLESLYFYN 190


>gi|289449785|ref|YP_003474451.1| ribonucleoside-diphosphate reductase subunit beta [Clostridiales
           genomosp. BVAB3 str. UPII9-5]
 gi|289184332|gb|ADC90757.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridiales
           genomosp. BVAB3 str. UPII9-5]
          Length = 400

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 41/188 (21%), Positives = 84/188 (44%), Gaps = 8/188 (4%)

Query: 10  IQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           +   +  + +D K+M+    +++N    +KY W  + Y    NN W+P E+ M  D+  +
Sbjct: 62  LFNEKGDIGLDKKKMIGGNPTNLNDFNNVKYKWVSDIYRQMMNNFWIPEEINMSTDVQQY 121

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           ++   L   ER    + L F    +SL  NN+   I ++++  E    L  QAF+EAVHS
Sbjct: 122 RT---LPVAERRAYDKILSFLVFLDSLQTNNVPF-IAQYITANEAVLCLTIQAFQEAVHS 177

Query: 129 HTFQYIITSLGLD--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRI 185
            ++ Y++ ++       E+   +R+   + A+  +    +    +  S     +   +  
Sbjct: 178 QSYSYMLDTICSPDERTEILYQWRDDEHLLARNKFIGDLFMAFQNDQSERNLMRVLVANY 237

Query: 186 LTRSLRFL 193
           +   + F 
Sbjct: 238 ILEGIYFY 245


>gi|254303614|ref|ZP_04970972.1| ribonucleoside-diphosphate reductase [Fusobacterium nucleatum
           subsp. polymorphum ATCC 10953]
 gi|148323806|gb|EDK89056.1| ribonucleoside-diphosphate reductase [Fusobacterium nucleatum
           subsp. polymorphum ATCC 10953]
          Length = 344

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 46/192 (23%), Positives = 88/192 (45%), Gaps = 8/192 (4%)

Query: 7   LSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
              +   E    ++ +R++    +++  L  ++Y WA + Y +   N W+P +V +  D 
Sbjct: 3   RKKLFNPEGDDTLNARRIIKGNSTNLFNLNNVRYQWANQLYRTMMANFWIPEKVDLTQDK 62

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             +++   LT  ER      L F    +S+  NNI   I  H++ PE    L  Q F+EA
Sbjct: 63  NDYEN---LTVPEREAYDGILSFLIFLDSIQTNNIP-NISDHVTAPEVNLLLAIQTFQEA 118

Query: 126 VHSHTFQYIITSLGLDEGE--LFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           +HS ++QYII S+   +    +++ +R+   +  + ++  + Y   +   S   + K   
Sbjct: 119 IHSQSYQYIIESILPKQSRDLIYDKWRDDKVLFERNSFIAKIYQDFIDEQSDENFAKVII 178

Query: 183 SRILTRSLRFLC 194
           +  L  SL F  
Sbjct: 179 ANYLLESLYFYN 190


>gi|18311342|ref|NP_563276.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           perfringens str. 13]
 gi|110801267|ref|YP_697050.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           perfringens ATCC 13124]
 gi|168205189|ref|ZP_02631194.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens E str. JGS1987]
 gi|168210336|ref|ZP_02635961.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens B str. ATCC 3626]
 gi|168213271|ref|ZP_02638896.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens CPE str. F4969]
 gi|168216675|ref|ZP_02642300.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens NCTC 8239]
 gi|169347055|ref|ZP_02865997.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens C str. JGS1495]
 gi|182625797|ref|ZP_02953564.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens D str. JGS1721]
 gi|18146026|dbj|BAB82066.1| ribonucleoside-diphosphate reductase beta subunit [Clostridium
           perfringens str. 13]
 gi|110675914|gb|ABG84901.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens ATCC 13124]
 gi|169296738|gb|EDS78867.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens C str. JGS1495]
 gi|170663363|gb|EDT16046.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens E str. JGS1987]
 gi|170711548|gb|EDT23730.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens B str. ATCC 3626]
 gi|170715235|gb|EDT27417.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens CPE str. F4969]
 gi|177908953|gb|EDT71440.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens D str. JGS1721]
 gi|182381151|gb|EDT78630.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens NCTC 8239]
          Length = 344

 Score =  170 bits (431), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 8/189 (4%)

Query: 9   PIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           P+      +  + K+M+N  + ++N    +KY W  E Y  A NN W+P E+ +  DL  
Sbjct: 7   PLFNEFGDIETNKKKMINGNTTNLNDFNNMKYTWVSEWYRQAMNNFWIPEEINLAQDLKD 66

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           +K    LT +E+    + L F    +S+   N+   I  +++  E    L  QAF+EAVH
Sbjct: 67  YKK---LTKEEKTAYDKILSFLIFLDSIQTANLG-NINSYITASEVNLCLTIQAFQEAVH 122

Query: 128 SHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSR 184
           S ++ Y++ S+   E   E+   +++   +  +  +    Y   L   S   + K   + 
Sbjct: 123 SQSYSYMLDSICSPEERNEILFQWKDDAILLQRNKFIGDLYNNFLEDSSMENFIKSVMAN 182

Query: 185 ILTRSLRFL 193
            +   + F 
Sbjct: 183 YILEGVYFY 191


>gi|294782021|ref|ZP_06747353.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 1_1_41FAA]
 gi|294481832|gb|EFG29601.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 1_1_41FAA]
          Length = 344

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 45/192 (23%), Positives = 88/192 (45%), Gaps = 8/192 (4%)

Query: 7   LSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
              +   E    ++ ++++    +++  L  ++Y WA + Y +   N W+P +V +  D 
Sbjct: 3   RKKLFNPEGDDTLNARKIIKGNSTNLFNLNNVRYQWANQLYRTMMANFWIPEKVDLTQDK 62

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             +++   LT  ER      L F    +S+  NNI   I  H++ PE    L  Q F+EA
Sbjct: 63  NDYEN---LTLPEREAYDGILSFLIFLDSIQTNNIP-NISDHVTAPEVNMLLAIQTFQEA 118

Query: 126 VHSHTFQYIITSLGLDEGE--LFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           +HS ++QYII S+   +    +++ +R+   +  + ++  + Y   +   S   + K   
Sbjct: 119 IHSQSYQYIIESILPKQSRDLIYDKWRDDKVLFERNSFIAKIYQDFIDEQSDENFAKVII 178

Query: 183 SRILTRSLRFLC 194
           +  L  SL F  
Sbjct: 179 ANYLLESLYFYN 190


>gi|289765931|ref|ZP_06525309.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. D11]
 gi|289717486|gb|EFD81498.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. D11]
          Length = 344

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 45/192 (23%), Positives = 88/192 (45%), Gaps = 8/192 (4%)

Query: 7   LSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
              +   E    ++ ++++    +++  L  ++Y WA + Y +   N W+P +V +  D 
Sbjct: 3   RKKLFNPEGDDTLNSRKIIKGNSTNLFNLNNVRYQWANQLYRTMMANFWIPEKVDLTQDK 62

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             +++   LT  ER      L F    +S+  NNI   I  H++ PE    L  Q F+EA
Sbjct: 63  NDYEN---LTVPEREAYDGILSFLIFLDSIQTNNIP-NISDHVTAPEVNLLLAIQTFQEA 118

Query: 126 VHSHTFQYIITSLGLDEGE--LFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           +HS ++QYII S+   +    +++ +R+   +  + ++  + Y   +   S   + K   
Sbjct: 119 IHSQSYQYIIESILPKQSRDLIYDKWRDDKVLFERNSFIAKIYQDFIDEQSDENFAKVII 178

Query: 183 SRILTRSLRFLC 194
           +  L  SL F  
Sbjct: 179 ANYLLESLYFYN 190


>gi|209877302|ref|XP_002140093.1| ribonucleotide-diphosphate reductase, small subunit
           [Cryptosporidium muris RN66]
 gi|209555699|gb|EEA05744.1| ribonucleotide-diphosphate reductase, small subunit, putative
           [Cryptosporidium muris RN66]
          Length = 346

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 6/152 (3%)

Query: 20  DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER 79
            ++ +L++ + ++Q++  +    W  Y     + W   E+ +  D+  W+S   L + E+
Sbjct: 26  HEEPVLSSDTRLHQIIKSEIEVMWSMYKKEEASFWTAEEIDLGQDMRDWES---LKEPEK 82

Query: 80  LMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
             IK  L FFA+S+ +V  N+ +   + +   E R Y   Q   E +HS T+  +I    
Sbjct: 83  HFIKYVLAFFAASDGIVMENLAVNFLKEIQIEEARMYYGFQIAMEQIHSETYSLLIDQYI 142

Query: 140 ---LDEGELFNMYREVPSITAKANWALQYTQT 168
               D   LF     +P++  KA WA ++   
Sbjct: 143 SDVKDRQMLFEAISHLPAVKTKAKWATKWMNN 174


>gi|237738722|ref|ZP_04569203.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 2_1_31]
 gi|229423825|gb|EEO38872.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 2_1_31]
          Length = 344

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 45/192 (23%), Positives = 88/192 (45%), Gaps = 8/192 (4%)

Query: 7   LSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
              +   E    ++ ++++    +++  L  ++Y WA + Y +   N W+P +V +  D 
Sbjct: 3   RKKLFNPEGDDTLNARKIIKGNSTNLFNLNNVRYQWANQLYRTMMANFWIPEKVDLTQDK 62

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             +++   LT  ER      L F    +S+  NNI   I  H++ PE    L  Q F+EA
Sbjct: 63  NDYEN---LTLPEREAYDGILSFLIFLDSIQTNNIP-NISDHVTAPEVNMLLAIQTFQEA 118

Query: 126 VHSHTFQYIITSLGLDEGE--LFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           +HS ++QYII S+   +    +++ +R+   +  + ++  + Y   +   S   + K   
Sbjct: 119 IHSQSYQYIIESILPKQSRDLIYDKWRDDKVLFERNSFIAKIYQDFIDEQSDENFAKVII 178

Query: 183 SRILTRSLRFLC 194
           +  L  SL F  
Sbjct: 179 ANYLLESLYFYN 190


>gi|260497963|ref|ZP_05816079.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_33]
 gi|260196471|gb|EEW94002.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_33]
          Length = 344

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 45/192 (23%), Positives = 88/192 (45%), Gaps = 8/192 (4%)

Query: 7   LSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
              +   E    ++ ++++    +++  L  ++Y WA + Y +   N W+P +V +  D 
Sbjct: 3   RKKLFNPEGDDTLNSRKIIKGNSTNLFNLNNVRYQWANQLYRTMMANFWIPEKVDLTQDK 62

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             +++   LT  ER      L F    +S+  NNI   I  H++ PE    L  Q F+EA
Sbjct: 63  NDYEN---LTVPEREAYDGILSFLIFLDSIQTNNIP-NISEHVTAPEVNLLLAIQTFQEA 118

Query: 126 VHSHTFQYIITSLGLDEGE--LFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           +HS ++QYII S+   +    +++ +R+   +  + ++  + Y   +   S   + K   
Sbjct: 119 IHSQSYQYIIESILPKQSRDLIYDKWRDDKVLFERNSFIAKIYQDFIDEQSDENFAKVII 178

Query: 183 SRILTRSLRFLC 194
           +  L  SL F  
Sbjct: 179 ANYLLESLYFYN 190


>gi|160937686|ref|ZP_02085046.1| hypothetical protein CLOBOL_02576 [Clostridium bolteae ATCC
           BAA-613]
 gi|158439331|gb|EDP17083.1| hypothetical protein CLOBOL_02576 [Clostridium bolteae ATCC
           BAA-613]
          Length = 347

 Score =  170 bits (430), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 81/190 (42%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
            P+   +   + + +RM+   + ++N    +KY WA   Y  A NN W+P E+ +  DL 
Sbjct: 7   KPLFNPQGDTDKNSRRMIGGNTTNLNDFNNMKYTWASSWYRQAMNNFWIPEEINLSADLK 66

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +K+   LT  ER    + L F    +S+   N+   I ++++  E    L  Q F+EAV
Sbjct: 67  DYKN---LTAAERTAYDKILSFLVFLDSIQTANLPC-IAQYITANEVNLCLTIQGFQEAV 122

Query: 127 HSHTFQYIITSLGLD--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRS 183
           HS ++ Y++ S+        +   ++E   +  +  +    Y +           +   +
Sbjct: 123 HSQSYSYMLDSICSPVERDRILYQWKEDEHLLRRNTFIGNLYNEFQEKKDDVTLLRVIMA 182

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 183 NYILEGIYFY 192


>gi|237845387|ref|XP_002371991.1| ribonucleotide-diphosphate reductase, small subunit, putative
           [Toxoplasma gondii ME49]
 gi|211969655|gb|EEB04851.1| ribonucleotide-diphosphate reductase, small subunit, putative
           [Toxoplasma gondii ME49]
 gi|221501644|gb|EEE27410.1| ribonucleotide-diphosphate reductase, small subunit, putative
           [Toxoplasma gondii VEG]
          Length = 391

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 19/175 (10%)

Query: 23  RMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMI 82
            +L A      +LP+++   WE Y     + W   E+ +  D+  W++   L ++E+  I
Sbjct: 74  PLLMANPHRWVILPIQHHAIWEMYKKQEASFWTAEEIDLAQDMTHWET---LGENEKHFI 130

Query: 83  KRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE 142
           K  L FFA+S+ +V  N+       +  PE R +   Q   E +HS T+  +I     DE
Sbjct: 131 KYVLAFFAASDGIVLENLAEKFLTEIQVPEARAFYGFQIAMENIHSETYSLLIDQYIRDE 190

Query: 143 GE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            E   LF+    V ++  KA WA  +                R+    R + F C
Sbjct: 191 EEKLQLFDAVHNVKAVAVKAAWAAMWIN-------------NRNCFAERLVGFAC 232


>gi|325475472|gb|EGC78653.1| ribonucleoside-diphosphate reductase [Treponema denticola F0402]
          Length = 351

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 84/190 (44%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
             +      +    ++M+   + ++N    +KY WA + Y  A NN W+P E+ M  D+ 
Sbjct: 11  KALFNENGDIETHKRKMIGGNTTNLNDFNNMKYSWASDWYRQAMNNFWIPEEINMTTDVQ 70

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            ++    L+  E+    + L F    +S+   N+   + ++++  E    L  QAF+EAV
Sbjct: 71  DYRK---LSGPEKTAYDKILSFLIFLDSIQTANLP-NVGQYVTANEVNLCLTIQAFQEAV 126

Query: 127 HSHTFQYIITSLGLDEG--ELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRS 183
           HS ++ Y++ ++   E   E+   +++   +  +  +    Y +  S  S   + K   +
Sbjct: 127 HSQSYSYMLDTICSPEERTEILYQWKDDEHLLRRNKFIGDLYNEFQSDKSALAFLKVCVA 186

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 187 NYILEGIYFY 196


>gi|221480670|gb|EEE19110.1| ribonucleotide-diphosphate reductase, small subunit, putative
           [Toxoplasma gondii GT1]
          Length = 391

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 19/175 (10%)

Query: 23  RMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMI 82
            +L A      +LP+++   WE Y     + W   E+ +  D+  W++   L ++E+  I
Sbjct: 74  PLLMANPHRWVILPIQHHAIWEMYKKQEASFWTAEEIDLAQDMTHWET---LGENEKHFI 130

Query: 83  KRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE 142
           K  L FFA+S+ +V  N+       +  PE R +   Q   E +HS T+  +I     DE
Sbjct: 131 KYVLAFFAASDGIVLENLAEKFLTEIQVPEARAFYGFQIAMENIHSETYSLLIDQYIRDE 190

Query: 143 GE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            E   LF+    V ++  KA WA  +                R+    R + F C
Sbjct: 191 EEKLQLFDAVHNVKAVAVKAAWAAMWIN-------------NRNCFAERLVGFAC 232


>gi|34763895|ref|ZP_00144797.1| Ribonucleoside-diphosphate reductase beta chain [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|27886329|gb|EAA23602.1| Ribonucleoside-diphosphate reductase beta chain [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
          Length = 245

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 46/198 (23%), Positives = 89/198 (44%), Gaps = 8/198 (4%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEV 59
           M        +   E    ++ ++++    +++  L  ++Y WA + Y +   N W+P +V
Sbjct: 1   MKVAVDRKKLFNPEGDDTLNARKIIKGNSTNLFNLNNVRYQWANQLYRTMMANFWIPEKV 60

Query: 60  PMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLR 119
            +  D   +++   LT  ER      L F    +S+  NNI   I  H++ PE    L  
Sbjct: 61  DLTQDKNDYEN---LTVPEREAYDGILSFLIFLDSIQTNNIP-NISDHVTAPEVNLLLAI 116

Query: 120 QAFEEAVHSHTFQYIITSLGLDEGE--LFNMYREVPSITAKANWALQ-YTQTLSSPSFHY 176
           Q F+EA+HS ++QYII S+   +    +++ +R+   +  + ++  + Y   +   S   
Sbjct: 117 QTFQEAIHSQSYQYIIESILPKQSRDLIYDKWRDDKVLFERNSFIAKIYQDFIDEQSDEN 176

Query: 177 WNKRRRSRILTRSLRFLC 194
           + K   +  L  SL F  
Sbjct: 177 FAKVIIANYLLESLYFYN 194


>gi|167760514|ref|ZP_02432641.1| hypothetical protein CLOSCI_02888 [Clostridium scindens ATCC 35704]
 gi|167661880|gb|EDS06010.1| hypothetical protein CLOSCI_02888 [Clostridium scindens ATCC 35704]
          Length = 347

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 78/190 (41%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
            P+        V+ +RM+   + ++N    +KY W  + Y  A NN W+P E+ M  D+ 
Sbjct: 7   KPLFNPSGDTQVNKRRMIGGNTTNLNDFNNMKYDWVSDWYRQAMNNFWIPEEINMGVDIK 66

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            ++    L   ER    + L F    +S+   N+   I  +++  E    L  Q F+EAV
Sbjct: 67  DYRK---LPQAERRAYDKILSFLIFLDSIQTANLP-NIGEYITANEVNLCLSIQTFQEAV 122

Query: 127 HSHTFQYIITSLGLD--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRS 183
           HS ++ Y++ ++       ++   ++E   +  +  +    Y +           K   +
Sbjct: 123 HSQSYSYMLDTICEPQERNDVLYQWKEDQHLLKRNEFIGNLYNEFQKKKDAGVLVKTLVA 182

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 183 NYILEGIYFY 192


>gi|237742881|ref|ZP_04573362.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 4_1_13]
 gi|229430529|gb|EEO40741.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 4_1_13]
          Length = 344

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 45/192 (23%), Positives = 88/192 (45%), Gaps = 8/192 (4%)

Query: 7   LSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
              +   E    ++ ++++    +++  L  ++Y WA + Y +   N W+P +V +  D 
Sbjct: 3   RKKLFNPEGDDTLNARKIIKGNSTNLFNLNNVRYQWANQLYRTMMANFWIPEKVDLTQDK 62

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             +++   LT  ER      L F    +S+  NNI   I  H++ PE    L  Q F+EA
Sbjct: 63  NDYEN---LTVPEREAYDGILSFLIFLDSIQTNNIP-NISDHVTAPEVNLLLAIQTFQEA 118

Query: 126 VHSHTFQYIITSLGLDEGE--LFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           +HS ++QYII S+   +    +++ +R+   +  + ++  + Y   +   S   + K   
Sbjct: 119 IHSQSYQYIIESILPKQSRDLIYDKWRDDKVLFERNSFIAKIYQDFIDEQSDENFAKVII 178

Query: 183 SRILTRSLRFLC 194
           +  L  SL F  
Sbjct: 179 ANYLLESLYFYN 190


>gi|237743586|ref|ZP_04574067.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 7_1]
 gi|229432617|gb|EEO42829.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 7_1]
          Length = 344

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 45/192 (23%), Positives = 88/192 (45%), Gaps = 8/192 (4%)

Query: 7   LSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
              +   E    ++ ++++    +++  L  ++Y WA + Y +   N W+P +V +  D 
Sbjct: 3   RKKLFNPEGDDTLNARKIIKGNSTNLFNLNNVRYQWANQLYRTMMANFWIPEKVDLTQDK 62

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             +++   LT  ER      L F    +S+  NNI   I  H++ PE    L  Q F+EA
Sbjct: 63  NDYEN---LTVPEREAYDGILSFLIFLDSIQTNNIP-NISDHVTAPEVNLLLAIQTFQEA 118

Query: 126 VHSHTFQYIITSLGLDEGE--LFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           +HS ++QYII S+   +    +++ +R+   +  + ++  + Y   +   S   + K   
Sbjct: 119 IHSQSYQYIIESILPKQSRDLIYDKWRDDKVLFERNSFIAKIYQDFIDEQSDENFAKVII 178

Query: 183 SRILTRSLRFLC 194
           +  L  SL F  
Sbjct: 179 ANYLLESLYFYN 190


>gi|253582918|ref|ZP_04860136.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           varium ATCC 27725]
 gi|251835124|gb|EES63667.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           varium ATCC 27725]
          Length = 348

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 46/198 (23%), Positives = 92/198 (46%), Gaps = 8/198 (4%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEV 59
           M        +       ++  +R++    +++  L  +KY WA + Y +   N W+P ++
Sbjct: 1   MKAAVDRKKLFNPLGDDSLSKRRIIKGDSTNIFNLNNVKYQWANQLYRTMMGNFWIPEKI 60

Query: 60  PMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLR 119
            +  D   +K+   LTD E+      L F    +S+  NNI   +  +++ PE    L  
Sbjct: 61  DLTQDKNDYKN---LTDQEKEAYDGILSFLIFLDSIQTNNIP-NVCDYITAPEINLILSI 116

Query: 120 QAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQ-YTQTLSSPSFHY 176
           Q F+EA+HS ++QYII S+   E    +++ +RE   +  +  +  + Y + L +P+   
Sbjct: 117 QTFQEAIHSQSYQYIIESILPKEIRNSIYDKWREDKILFERNKYIAEMYQRFLENPNDEN 176

Query: 177 WNKRRRSRILTRSLRFLC 194
           ++K   +  L  ++ F  
Sbjct: 177 FSKVIVADYLLEAIYFYN 194


>gi|319790519|ref|YP_004152152.1| ribonucleotide reductase [Thermovibrio ammonificans HB-1]
 gi|317115021|gb|ADU97511.1| ribonucleotide reductase [Thermovibrio ammonificans HB-1]
          Length = 352

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 47/190 (24%), Positives = 81/190 (42%), Gaps = 8/190 (4%)

Query: 9   PIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           PI   E   +   + +L   + ++  L  +KY WA + Y     N W+P  V +  D+  
Sbjct: 13  PIFNPEGNDDPAKRGILKGNTTNIFNLNVIKYPWATKLYRVMMANFWIPETVDLTQDVQD 72

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           +K    LTDDER      L F    +S+   NI   I  ++  PE    L   A++EA+H
Sbjct: 73  YKE---LTDDERQAYDEILSFLVFLDSIQTTNIP-NIAAYVKAPEITIDLSIHAYQEAIH 128

Query: 128 SHTFQYIITSLGL--DEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSR 184
           S ++ Y I S+       E++  +++ P +  +  +    Y + L  P+   + +     
Sbjct: 129 SQSYGYTIESVVPAEKREEVYYWWKKDPILFERNKYIADIYQKFLEEPTLENYGEVLIGN 188

Query: 185 ILTRSLRFLC 194
            L   L F  
Sbjct: 189 YLLEGLYFYN 198


>gi|269105083|ref|ZP_06157778.1| ribonucleotide reductase 2 [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268160718|gb|EEZ39216.1| ribonucleotide reductase 2 [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 310

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 11/168 (6%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
            +   L P++Y   W+ Y +     W   E+    DLA       LT+ E+  I+  L F
Sbjct: 4   KNKFSLFPIQYEEIWQAYKTHEAAFWTTEELDFAQDLADLAK---LTEGEKHFIRHVLAF 60

Query: 89  FASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL---DEGEL 145
           FA SE ++  N++   Y  +   E R +L  QAF E +H+ T+   + +      +   L
Sbjct: 61  FAQSEGMINENLLTRFYGEIEIAEARCFLALQAFNEVIHAETYALQLETYIPAVEERERL 120

Query: 146 FNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           FN    VP++  KA W +++  +           R  +  L   L F 
Sbjct: 121 FNAIENVPTVKRKAEWVMKWISSD-----KPLTMRLIAFGLVEGLFFA 163


>gi|291562343|emb|CBL41159.1| Ribonucleotide reductase, beta subunit [butyrate-producing
           bacterium SS3/4]
          Length = 346

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 78/190 (41%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
            P+   E  ++V  +RM+   + ++N    +KY W  + Y  A NN W+P E+ +  D+ 
Sbjct: 6   KPLFNPEGNLDVRLRRMIGGNTTNLNDFNNMKYAWVSDWYRQAMNNFWIPEEINLSQDVK 65

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +     L   ER    + L F    +S+   N+   I  +++  E    L  QAF+E V
Sbjct: 66  DY---PRLLSAERSAYDKILSFLVFLDSIQTANLP-NIGAYITANEVNLCLSIQAFQECV 121

Query: 127 HSHTFQYIITSLGLD--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRS 183
           HS ++ Y++ ++       ++   ++    +  +  +    Y +           +   +
Sbjct: 122 HSQSYSYMLDTICSPVERNDILYQWKTDEHLLRRNTFIGDCYNEFQERKDAPTLLRVMMA 181

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 182 NYILEGIYFY 191


>gi|266623614|ref|ZP_06116549.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           hathewayi DSM 13479]
 gi|288864591|gb|EFC96889.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           hathewayi DSM 13479]
          Length = 346

 Score =  169 bits (428), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 41/195 (21%), Positives = 82/195 (42%), Gaps = 8/195 (4%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
                 P+   +   +V ++RM+   + ++N    +KY W  + Y  A NN W+P E+ +
Sbjct: 2   EQLIRKPLFNPDGDTDVRNRRMIGGNTTNLNDFNNMKYTWVSDWYRQAMNNFWVPEEINL 61

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D+  +     L   ER    + L F    +S+   N+  AI  +++  E    L  Q 
Sbjct: 62  GPDVKDY---PMLDAGERRAYDKILSFLVFLDSIQTANLP-AIGEYITANEINLCLSIQT 117

Query: 122 FEEAVHSHTFQYIITSLGLD--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWN 178
           F+EAVHS ++ Y++ ++       E+   ++    + A+  +    Y +     S   + 
Sbjct: 118 FQEAVHSQSYSYMLDTICEPQTRNEVLYQWKNDEHLLARNTFIGNLYNEFQKDKSPFTFM 177

Query: 179 KRRRSRILTRSLRFL 193
           K   +  +   + F 
Sbjct: 178 KTVVANFILEGVYFY 192


>gi|110802082|ref|YP_699620.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           perfringens SM101]
 gi|110682583|gb|ABG85953.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           perfringens SM101]
          Length = 344

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 8/189 (4%)

Query: 9   PIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           P+      +  + K+M+N  + ++N    +KY W  E Y  A NN W+P E+ +  DL  
Sbjct: 7   PLFNEFGDIETNKKKMINGNTTNLNDFNNMKYTWVSEWYRQAMNNFWIPEEINLAQDLKD 66

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           +K    LT +E+    + L F    +S+   N+   I  +++  E    L  QAF+EAVH
Sbjct: 67  YKK---LTKEEKAAYDKILSFLIFLDSIQTANLG-NINSYITASEVNLCLTIQAFQEAVH 122

Query: 128 SHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSR 184
           S ++ Y++ S+   E   E+   +++   +  +  +    Y   L   S   + K   + 
Sbjct: 123 SQSYSYMLDSICSPEERNEILFQWKDDAILLQRNKFIGDLYNNFLEDSSIENFIKSVMAN 182

Query: 185 ILTRSLRFL 193
            +   + F 
Sbjct: 183 YILEGVYFY 191


>gi|76630263|ref|XP_880783.1| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 3 [Bos
           taurus]
 gi|297480612|ref|XP_002691528.1| PREDICTED: ribonucleotide reductase M2 polypeptide isoform 2 [Bos
           taurus]
 gi|296482362|gb|DAA24477.1| ribonucleotide reductase M2 polypeptide isoform 2 [Bos taurus]
          Length = 341

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 11/150 (7%)

Query: 47  LSACNNHWMPTE-VPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIY 105
            +A      P+E V +  D+  W+    L  +ER  I   L FFA+S+ +V  N+V    
Sbjct: 46  KTARRIFQEPSEPVDLSKDIQHWE---ALKSEERYFISHVLAFFAASDGIVNENLVERFS 102

Query: 106 RHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWA 162
           + +   E R +   Q   E +HS  +  +I +   D  E   LFN    +P +  KA+WA
Sbjct: 103 QEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREFLFNAIETMPCVKKKADWA 162

Query: 163 LQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           L++    ++     + +R  +      + F
Sbjct: 163 LRWIGDKAA----TYGERVVAFAAVEGIFF 188


>gi|88682973|gb|AAI05512.1| RRM2 protein [Bos taurus]
          Length = 338

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 11/150 (7%)

Query: 47  LSACNNHWMPTE-VPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIY 105
            +A      P+E V +  D+  W+    L  +ER  I   L FFA+S+ +V  N+V    
Sbjct: 43  KTARRIFQEPSEPVDLSKDIQHWE---ALKSEERYFISHVLAFFAASDGIVNENLVERFS 99

Query: 106 RHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWA 162
           + +   E R +   Q   E +HS  +  +I +   D  E   LFN    +P +  KA+WA
Sbjct: 100 QEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREFLFNAIETMPCVKKKADWA 159

Query: 163 LQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           L++    ++     + +R  +      + F
Sbjct: 160 LRWIGDKAA----TYGERVVAFAAVEGIFF 185


>gi|47213103|emb|CAF89523.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 407

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 10/137 (7%)

Query: 59  VPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLL 118
           V +  DL  W+S   L DDER  I   L FFA+S+ +V  N+V    + +   E R +  
Sbjct: 138 VDLSKDLQHWES---LKDDERFFISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYG 194

Query: 119 RQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFH 175
            Q   E +HS  +  +I +   +  E   LFN    +P +  KA+WAL +     +    
Sbjct: 195 FQIAMENIHSEMYSLLIDTYIKEPSEREYLFNAIETLPCVKKKADWALNWIGNQKA---- 250

Query: 176 YWNKRRRSRILTRSLRF 192
            + +R  +      + F
Sbjct: 251 SYGERVVAFAAVEGIFF 267


>gi|152993970|ref|YP_001359691.1| ribonucleotide-diphosphate reductase subunit beta [Sulfurovum sp.
           NBC37-1]
 gi|151425831|dbj|BAF73334.1| ribonucleoside-diphosphate reductase, beta subunit [Sulfurovum sp.
           NBC37-1]
          Length = 339

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 47/189 (24%), Positives = 87/189 (46%), Gaps = 5/189 (2%)

Query: 7   LSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
              I   E      D+++     + + +L  +KY WA+  +    NN W P EV M  D+
Sbjct: 3   RKKIYNPESEERTSDRKIFGGDPTGIFELNDIKYQWAYNLWEMMLNNTWFPKEVDMTRDV 62

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             +K    LTD E+    + L      +SL  NNI+  +   ++ PE    L+RQAFEEA
Sbjct: 63  NDYK---RLTDAEKQAYDKVLAQLIFMDSLQTNNIIDNLNPFITAPEVNLILVRQAFEEA 119

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSR 184
           +HS ++  ++ S+  +  E++ ++R    + +K +   + Y +   +P+     K   + 
Sbjct: 120 LHSQSYAVMVDSISTNSEEIYELWRRDMKLKSKNDAIAKVYEELSENPTDENIVKAMFAN 179

Query: 185 ILTRSLRFL 193
            +   + F 
Sbjct: 180 QILEGIYFY 188


>gi|108563454|ref|YP_627770.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori HPAG1]
 gi|107837227|gb|ABF85096.1| ribonucleoside diphosphate reductase, beta subunit [Helicobacter
           pylori HPAG1]
          Length = 341

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 90/191 (47%), Gaps = 5/191 (2%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
                I   +   +V+++++     + +  L  +KY WA   + +   N W   EV M D
Sbjct: 3   VSRKKIYNPDSTESVNERKIFGGNPTSMFDLNKIKYQWADHLWKTMLANTWFAEEVSMND 62

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D   +     L+ +E++   R L      +SL  NN++  +   +++PE    L+RQA+E
Sbjct: 63  DKRDY---LKLSAEEKIGYDRALAQLIFMDSLQTNNLIDNVNPFITSPEINLCLVRQAYE 119

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           EA+HSH +  ++ S+  +  E+++M+R    + +K ++  Q Y +   +P+     K   
Sbjct: 120 EALHSHAYAVMVESISANTEEIYDMWRNDMQLKSKNDYIAQVYMELAKNPTEENILKVLF 179

Query: 183 SRILTRSLRFL 193
           +  +   + F 
Sbjct: 180 ANQILEGIYFY 190


>gi|320527966|ref|ZP_08029132.1| ribonucleoside-diphosphate reductase, beta subunit [Solobacterium
           moorei F0204]
 gi|320131592|gb|EFW24156.1| ribonucleoside-diphosphate reductase, beta subunit [Solobacterium
           moorei F0204]
          Length = 349

 Score =  168 bits (427), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 88/196 (44%), Gaps = 8/196 (4%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
            +     P+   E  ++V ++R++N  + ++N    +KY W  + Y  A NN W+P E+ 
Sbjct: 3   TDQINRKPLFNPEGDIDVRNRRLINFNTTNINDFNNMKYNWVSDWYRQAMNNFWVPEEIN 62

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           +  D + +     L+  E+    + L F    +SL + N+   I ++++  E    L  Q
Sbjct: 63  LNQDKSDY---PRLSLAEKTAYDKILSFLVYLDSLQSANLP-NISQYITANEVNLCLSIQ 118

Query: 121 AFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYW 177
            F+E +HS ++ Y++ S+   E   ++   ++    +  +  +  + Y + ++      +
Sbjct: 119 TFQECIHSQSYSYMLDSICSPEQRNDILYQWKTDEHLLKRNEFIGELYNEFVAKQDKQSF 178

Query: 178 NKRRRSRILTRSLRFL 193
            +   +  +   + F 
Sbjct: 179 LRVCIANFILEGVYFY 194


>gi|308183194|ref|YP_003927321.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori PeCan4]
 gi|308065379|gb|ADO07271.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori PeCan4]
          Length = 341

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 90/191 (47%), Gaps = 5/191 (2%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
                I   +   +V+++++     + +  L  +KY WA   + +   N W   EV M D
Sbjct: 3   VSRKKIYNPDSTESVNERKIFGGNPTSMFDLNKIKYQWADHLWKTMLANTWFAEEVSMND 62

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D   +     L+ +E++   R L      +SL  NN++  +   +++PE    L+RQA+E
Sbjct: 63  DKRDY---LKLSAEEKIGYDRALAQLIFMDSLQTNNLIDNVNPFITSPEINLCLVRQAYE 119

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           EA+HSH +  ++ S+  +  E+++M+R    + +K ++  Q Y +   +P+     K   
Sbjct: 120 EALHSHAYAVMVESISANTEEIYDMWRNDMQLKSKNDYIAQVYMELAKNPTEENILKALF 179

Query: 183 SRILTRSLRFL 193
           +  +   + F 
Sbjct: 180 ANQILEGIYFY 190


>gi|42525851|ref|NP_970949.1| ribonucleotide-diphosphate reductase subunit beta [Treponema
           denticola ATCC 35405]
 gi|41815901|gb|AAS10830.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           denticola ATCC 35405]
          Length = 351

 Score =  168 bits (426), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 84/190 (44%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
             +      +    ++M+   + ++N    +KY WA + Y  A NN W+P E+ M  D+ 
Sbjct: 11  KALFNENGDIETHKRKMIGGNTTNLNDFNNMKYSWASDWYRQAMNNFWIPEEINMTTDVQ 70

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            ++    L+  E+    + L F    +S+   N+   + ++++  E    L  QAF+EAV
Sbjct: 71  DYRK---LSIPEKTAYDKILSFLIFLDSIQTANLP-NVGQYVTANEVNLCLTIQAFQEAV 126

Query: 127 HSHTFQYIITSLGLDEG--ELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRS 183
           HS ++ Y++ ++   E   E+   +++   +  +  +    Y +  S  S   + K   +
Sbjct: 127 HSQSYSYMLDTICSPEERTEILYQWKDDEHLLRRNKFIGDLYNEFQSDKSALAFLKVCVA 186

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 187 NYILEGIYFY 196


>gi|313115920|ref|ZP_07801347.1| ribonucleoside-diphosphate reductase, beta subunit
           [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310621684|gb|EFQ05212.1| ribonucleoside-diphosphate reductase, beta subunit
           [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 347

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 77/190 (40%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
            P+   E   +V  +RM+   + ++N    +KY W  + Y  A NN W+P E+ +  D+ 
Sbjct: 7   KPLFNPEGDPDVRLRRMIGGNTTNLNDFNNMKYAWVSDWYRQAMNNFWIPEEINLSQDVK 66

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +     L   ER    + L F    +S+   N+   I  +++  E    L  QAF+E V
Sbjct: 67  DY---PRLLSAERSAYDKILSFLVFLDSIQTANLP-NIGAYITANEVNLCLSIQAFQECV 122

Query: 127 HSHTFQYIITSLGLD--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRS 183
           HS ++ Y++ ++       ++   ++    +  +  +    Y +           +   +
Sbjct: 123 HSQSYSYMLDTICSPVERNDILYQWKTDEHLLRRNTFIGDCYNEFQERKDAPTLLRVMMA 182

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 183 NYILEGIYFY 192


>gi|302386033|ref|YP_003821855.1| ribonucleotide reductase [Clostridium saccharolyticum WM1]
 gi|302196661|gb|ADL04232.1| ribonucleotide reductase [Clostridium saccharolyticum WM1]
          Length = 368

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 41/189 (21%), Positives = 83/189 (43%), Gaps = 8/189 (4%)

Query: 9   PIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           P+   +    V  +RM+N  + ++N    +KY W  + Y  A NN W+P E+ +  D   
Sbjct: 29  PLFHPDGETEVRKRRMINGNTTNLNDFNNMKYTWVSDWYRQAMNNFWIPEEINLSRDRKD 88

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           +     L+  ER    + L F    +S+   N+  A+  +++  E    L  Q F+EAVH
Sbjct: 89  Y---PLLSPQERRAYDKILSFLVFLDSIQTANLP-ALGEYVTANEINLCLSIQTFQEAVH 144

Query: 128 SHTFQYIITSLGLD--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSR 184
           S ++ Y++ ++       ++   ++  P + A+  +    Y +     S + + K   + 
Sbjct: 145 SQSYSYMLDTICEPQTRNDVLYQWKSDPRLLARNTFIGDLYNEFQKDKSPYAFMKTVVAN 204

Query: 185 ILTRSLRFL 193
            +   + F 
Sbjct: 205 FILEGVYFY 213


>gi|317062933|ref|ZP_07927418.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           ulcerans ATCC 49185]
 gi|313688609|gb|EFS25444.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           ulcerans ATCC 49185]
          Length = 353

 Score =  168 bits (426), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 45/192 (23%), Positives = 90/192 (46%), Gaps = 8/192 (4%)

Query: 7   LSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
              +       ++  +R++    +++  L  +KY WA + Y +   N W+P ++ +  D 
Sbjct: 12  RKKLFNPLGDDSLSKRRVIKGDSTNIFNLNNVKYQWANQLYRTMMGNFWIPEKIDLTQDK 71

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             +K+   LTD E+      L F    +S+  NNI   +  +++ PE    L  Q F+EA
Sbjct: 72  NDYKN---LTDQEKEAYDGILSFLIFLDSIQTNNIP-NVCDYITAPEINLILSIQTFQEA 127

Query: 126 VHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           +HS ++QYII S+   E    +++ +RE   +  +  +  + Y + L  P+   ++K   
Sbjct: 128 IHSQSYQYIIESILPKEIRNSIYDKWREDKILFERNKYIAEMYQKFLEEPNDKNFSKVII 187

Query: 183 SRILTRSLRFLC 194
           +  L  ++ F  
Sbjct: 188 ADYLLEAIYFYN 199


>gi|313683656|ref|YP_004061394.1| ribonucleotide reductase [Sulfuricurvum kujiense DSM 16994]
 gi|313156516|gb|ADR35194.1| ribonucleotide reductase [Sulfuricurvum kujiense DSM 16994]
          Length = 339

 Score =  168 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 46/189 (24%), Positives = 92/189 (48%), Gaps = 5/189 (2%)

Query: 7   LSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
              I       +V+D+++     + + +L  +KY WA+  +    NN W P EV M  D 
Sbjct: 3   RKQIYNPTSTEHVNDRQIFGGNPTGIFELNNIKYQWAYNLWEMMLNNTWFPKEVDMTRDA 62

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             +K    LT+ E+    + L      +SL  NN++  +  +++ PE    L+RQ+FEEA
Sbjct: 63  VDYK---YLTEMEKTAYDKALSQLIFMDSLQTNNLMDNVNPYVTAPEINLILVRQSFEEA 119

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKAN-WALQYTQTLSSPSFHYWNKRRRSR 184
           +HS ++  ++ S+  +  E+++++R+   +  K +  A +Y +  + PS   + K   + 
Sbjct: 120 LHSQSYAVMVDSISQNSEEIYDLWRKDMMLKTKNDSIAARYDELANDPSESAFVKACFAN 179

Query: 185 ILTRSLRFL 193
            +   + F 
Sbjct: 180 QILEGIYFY 188


>gi|237749822|ref|ZP_04580302.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           bilis ATCC 43879]
 gi|229374572|gb|EEO24963.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           bilis ATCC 43879]
          Length = 351

 Score =  168 bits (425), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 46/193 (23%), Positives = 87/193 (45%), Gaps = 5/193 (2%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           N      I       +V+++R+     + + +L  +KY WA+    +   N W P EV M
Sbjct: 10  NRVSRKKIYNPHSTESVNERRIFGGNPTAIFELNKIKYQWAYNLLRTMFANTWFPEEVNM 69

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D   +     LT  E+    R L      +SL  NN+   I  +++ PE    L+RQA
Sbjct: 70  NQDKRDY---MELTLQEKQGYDRALAQLIFMDSLQTNNLTDNINPYITCPEINMLLVRQA 126

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKR 180
           FEE++H+ ++  ++ S+  +  E++ M+R+   + +K ++    YT    +P+     K 
Sbjct: 127 FEESLHAQSYAVMVDSISANTDEIYQMWRKDDKLRSKNDYIADVYTDLAKNPTETNLIKA 186

Query: 181 RRSRILTRSLRFL 193
             +  +   + F 
Sbjct: 187 MFANQILEGIYFY 199


>gi|160942848|ref|ZP_02090088.1| hypothetical protein FAEPRAM212_00325 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445900|gb|EDP22903.1| hypothetical protein FAEPRAM212_00325 [Faecalibacterium prausnitzii
           M21/2]
          Length = 347

 Score =  168 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 76/190 (40%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
            P+   E   +V  +RM    + ++N    +KY W  + Y  A NN W+P E+ +  D+ 
Sbjct: 7   KPLFNPEGDPDVRLRRMTGGNTTNLNDFNNMKYAWVSDWYRQAMNNFWIPEEINLSQDVK 66

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +     L   ER    + L F    +S+   N+   I  +++  E    L  QAF+E V
Sbjct: 67  DY---PRLLSAERSAYDKILSFLVFLDSIQTANLP-NIGAYITANEVNLCLSIQAFQECV 122

Query: 127 HSHTFQYIITSLGLD--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRS 183
           HS ++ Y++ ++       ++   ++    +  +  +    Y +           +   +
Sbjct: 123 HSQSYSYMLDTICSPVERNDILYQWKTDEHLLRRNTFIGDCYNEFQERKDAPTLLRVMMA 182

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 183 NYILEGIYFY 192


>gi|322500276|emb|CBZ35354.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 196

 Score =  168 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 12/152 (7%)

Query: 2   ANNTGLSPIQAGEKRV---------NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNN 52
             N  + P+ AG + +         N +++ +         L P++Y   W KY    + 
Sbjct: 39  TENLVMKPVAAGAEVLTADKVAEGTNAEEEPLQQENPFRYVLFPIQYHDIWRKYKEQESC 98

Query: 53  HWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPE 112
            W   E+ + +D+  W +   L D ER  IK  L FFA S+ +V  N+       +  PE
Sbjct: 99  IWTVEEIDLGNDMKDWAT---LNDGERHFIKHVLAFFAGSDGIVIENLAQRFMSDVKVPE 155

Query: 113 CRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE 144
            R +   Q   E +HS T+  ++ +   D  E
Sbjct: 156 ARAFYGFQLMMENIHSETYSVLLDTYITDSEE 187


>gi|317012862|gb|ADU83470.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Lithuania75]
          Length = 341

 Score =  168 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 45/191 (23%), Positives = 90/191 (47%), Gaps = 5/191 (2%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
                I   +   +V+++++     + +  L  +KY WA   + +   N W   EV M D
Sbjct: 3   VSRKKIYNPDSTESVNERKIFGGNPTSMFDLNKIKYQWADHLWKTMLANTWFAEEVSMND 62

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D   +     L+ +E++   R L      +SL  NN++  I   +++PE    L+RQA+E
Sbjct: 63  DKRDY---LKLSAEEKIGYDRALAQLIFMDSLQTNNLIDNINPFITSPEINLCLVRQAYE 119

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           EA+HSH +  ++ S+  +  E+++M+R    + +K ++  Q Y +   +P+     K   
Sbjct: 120 EALHSHAYAVMVESISANTEEIYDMWRNDMQLKSKNDYIAQVYMELAKNPTEENILKALF 179

Query: 183 SRILTRSLRFL 193
           +  +   + F 
Sbjct: 180 ANQILEGIYFY 190


>gi|153814165|ref|ZP_01966833.1| hypothetical protein RUMTOR_00374 [Ruminococcus torques ATCC 27756]
 gi|317499963|ref|ZP_07958199.1| ribonucleoside-diphosphate reductase [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331087814|ref|ZP_08336739.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 3_1_46FAA]
 gi|145848561|gb|EDK25479.1| hypothetical protein RUMTOR_00374 [Ruminococcus torques ATCC 27756]
 gi|316898680|gb|EFV20715.1| ribonucleoside-diphosphate reductase [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330409509|gb|EGG88950.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 3_1_46FAA]
          Length = 353

 Score =  168 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 81/196 (41%), Gaps = 8/196 (4%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEV 59
           +       P+   +   +V  +RM+   + ++N    LKY WA E Y  A NN W+P E+
Sbjct: 6   IKKPLPHKPLFNPDGDTDVLKRRMIGGNTTNLNDYNNLKYTWASEWYRQAMNNFWIPEEI 65

Query: 60  PMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLR 119
            +  D+  +     L+  ER    + L F    +S+   N+   +  +++  E    L  
Sbjct: 66  NLSQDIKDY---PNLSPAERKAYDKILSFLVFLDSIQTANLPC-VGEYITANEVNLCLNI 121

Query: 120 QAFEEAVHSHTFQYIITSLGLDEG--ELFNMYREVPSITAKANWALQ-YTQTLSSPSFHY 176
           Q F+E VHS ++ Y++ ++   +   ++   ++    +  +  +  + Y +         
Sbjct: 122 QTFQECVHSQSYSYMLDTICSPDERMDILYQWKTDEHLLKRNTFIGECYNEFQVKKDART 181

Query: 177 WNKRRRSRILTRSLRF 192
             K   +  +   + F
Sbjct: 182 LVKVMMANFVLEGIYF 197


>gi|217032591|ref|ZP_03438080.1| hypothetical protein HPB128_159g17 [Helicobacter pylori B128]
 gi|298735909|ref|YP_003728434.1| ribonucleoside-diphosphate reductase subunit beta [Helicobacter
           pylori B8]
 gi|216945727|gb|EEC24352.1| hypothetical protein HPB128_159g17 [Helicobacter pylori B128]
 gi|298355098|emb|CBI65970.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter
           pylori B8]
          Length = 341

 Score =  168 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 45/191 (23%), Positives = 90/191 (47%), Gaps = 5/191 (2%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
                I   +   +V+++++     + +  L  +KY WA   + +   N W   EV M D
Sbjct: 3   VSRKKIYNPDSTESVNERKIFGGNPTSMFDLNKIKYQWADHLWKTMLANTWFAEEVSMND 62

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D   +     L+ +E++   R L      +SL  NN++  I   +++PE    L+RQA+E
Sbjct: 63  DKRDY---LKLSAEEKIGYDRALAQLIFMDSLQTNNLIDNINPFITSPEINLCLVRQAYE 119

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           EA+HSH +  ++ S+  +  E+++M+R    + +K ++  Q Y +   +P+     K   
Sbjct: 120 EALHSHAYAVMVESISANTEEIYDMWRNDMQLKSKNDYIAQVYMELAKNPTEENILKALF 179

Query: 183 SRILTRSLRFL 193
           +  +   + F 
Sbjct: 180 ANQILEGIYFY 190


>gi|257468678|ref|ZP_05632772.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium
           ulcerans ATCC 49185]
          Length = 348

 Score =  168 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 46/198 (23%), Positives = 91/198 (45%), Gaps = 8/198 (4%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEV 59
           M        +       ++  +R++    +++  L  +KY WA + Y +   N W+P ++
Sbjct: 1   MKAVVDRKKLFNPLGDDSLSKRRVIKGDSTNIFNLNNVKYQWANQLYRTMMGNFWIPEKI 60

Query: 60  PMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLR 119
            +  D   +K+   LTD E+      L F    +S+  NNI   +  +++ PE    L  
Sbjct: 61  DLTQDKNDYKN---LTDQEKEAYDGILSFLIFLDSIQTNNIP-NVCDYITAPEINLILSI 116

Query: 120 QAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQ-YTQTLSSPSFHY 176
           Q F+EA+HS ++QYII S+   E    +++ +RE   +  +  +  + Y + L  P+   
Sbjct: 117 QTFQEAIHSQSYQYIIESILPKEIRNSIYDKWREDKILFERNKYIAEMYQKFLEEPNDKN 176

Query: 177 WNKRRRSRILTRSLRFLC 194
           ++K   +  L  ++ F  
Sbjct: 177 FSKVIIADYLLEAIYFYN 194


>gi|308184827|ref|YP_003928960.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori SJM180]
 gi|308060747|gb|ADO02643.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori SJM180]
          Length = 341

 Score =  168 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 90/191 (47%), Gaps = 5/191 (2%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
                I   +   +V+++++     + +  L  +KY WA   + +   N W   EV M D
Sbjct: 3   VSRKKIYNPDSTESVNERKIFGGNPTSMFDLNKIKYQWADHLWKTMLANTWFAEEVSMND 62

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D   +     L+ +E++   R L      +SL  NN++  +   +++PE    L+RQA+E
Sbjct: 63  DKRDY---LKLSAEEKIGYDRALAQLIFMDSLQTNNLIDNVNPFITSPEINLCLVRQAYE 119

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           EA+HSH +  ++ S+  +  E+++M+R    + +K ++  Q Y +   +P+     K   
Sbjct: 120 EALHSHAYAVMVESISANTEEIYDMWRNDMQLKSKNDYIAQVYMELAKNPTEENILKALF 179

Query: 183 SRILTRSLRFL 193
           +  +   + F 
Sbjct: 180 ANQILEGIYFY 190


>gi|261838422|gb|ACX98188.1| ribonucleoside-diphosphate reductase 1 beta subunit [Helicobacter
           pylori 51]
          Length = 341

 Score =  168 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 89/191 (46%), Gaps = 5/191 (2%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
                I       +V+++++     + +  L  +KY WA   + +   N W   EV M D
Sbjct: 3   VSRKKIYNPNSTESVNERKIFGGNPTSMFDLNKIKYQWADHLWKTMLANTWFAEEVSMND 62

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D   +     L+ +E++   R L      +SL  NN++  +   +++PE    L+RQA+E
Sbjct: 63  DKRDY---LKLSAEEKIGYDRALAQLIFMDSLQTNNLIDNVNPFITSPEINLCLVRQAYE 119

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           EA+HSH +  ++ S+  +  E+++M+R    + +K ++  Q Y +   +P+     K   
Sbjct: 120 EALHSHAYAVMVESISANTEEIYDMWRNDMQLKSKNDYIAQVYMELAKNPTEENILKVLF 179

Query: 183 SRILTRSLRFL 193
           +  +   + F 
Sbjct: 180 ANQILEGIYFY 190


>gi|210135249|ref|YP_002301688.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori P12]
 gi|210133217|gb|ACJ08208.1| ribonucleoside-diphosphate reductase 1 beta subunit [Helicobacter
           pylori P12]
          Length = 341

 Score =  168 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 46/191 (24%), Positives = 90/191 (47%), Gaps = 5/191 (2%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
                I       +V+++++     + +  L  +KY WA   + +   N W   EV M D
Sbjct: 3   VSRKKIYNPNSTESVNERKIFGGNPTSMFDLNKIKYQWADHLWKTMLANTWFAEEVSMND 62

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D   +     L+ +E++   R L      +SL ANN++  I   +++PE    L+RQA+E
Sbjct: 63  DKRDY---LKLSAEEKIGYDRALAQLIFMDSLQANNLIDNINPFITSPEINLCLVRQAYE 119

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           EA+HSH +  ++ S+  +  E+++M+R    + +K ++  Q Y +   +P+     K   
Sbjct: 120 EALHSHAYAVMVESISANTEEIYDMWRNDMQLKSKNDYIAQVYMELAKNPTEENILKALF 179

Query: 183 SRILTRSLRFL 193
           +  +   + F 
Sbjct: 180 ANQILEGIYFY 190


>gi|167756571|ref|ZP_02428698.1| hypothetical protein CLORAM_02108 [Clostridium ramosum DSM 1402]
 gi|237733862|ref|ZP_04564343.1| ribonucleotide-diphosphate reductase subunit beta [Mollicutes
           bacterium D7]
 gi|167702746|gb|EDS17325.1| hypothetical protein CLORAM_02108 [Clostridium ramosum DSM 1402]
 gi|229382943|gb|EEO33034.1| ribonucleotide-diphosphate reductase subunit beta [Coprobacillus
           sp. D7]
          Length = 346

 Score =  168 bits (425), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 43/190 (22%), Positives = 84/190 (44%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
             +   +  ++V  +RM+N  + ++N    +KY W  + Y  A NN W+P E+ +  D+ 
Sbjct: 6   KALFNAKGDIDVRKRRMINGNTTNLNDFNNMKYQWVSDWYRQAMNNFWIPEEINLTQDIR 65

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            ++    L++ ER    + L F    +SL   N+   I  +++  E    L  QAF+EAV
Sbjct: 66  DYR---LLSEAERTAYDKILSFLVFLDSLQTANLP-NIGEYITANEINLCLTIQAFQEAV 121

Query: 127 HSHTFQYIITSLGLD--EGELFNMYREVPSITAKANWA-LQYTQTLSSPSFHYWNKRRRS 183
           HS ++ Y++ S+       E+   ++    +  +  +   QY   L      +  K   +
Sbjct: 122 HSQSYSYMLDSICSPTKRDEILYQWKFDEHLLKRNEFIGEQYNAFLEHKDSFHLMKTIMA 181

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 182 NYILEGIYFY 191


>gi|261839822|gb|ACX99587.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori 52]
          Length = 341

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 89/191 (46%), Gaps = 5/191 (2%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
                I       +V+++++     + +  L  +KY WA   + +   N W   EV M D
Sbjct: 3   VSRKKIYNPNSTESVNERKIFGGNPTSMFDLNKIKYQWADHLWKTMLANTWFAEEVSMND 62

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D   +     L+ +E++   R L      +SL  NN++  +   +++PE    L+RQA+E
Sbjct: 63  DKRDY---LKLSAEEKIGYDRALAQLIFMDSLQTNNLIDNVNPFITSPEINLCLVRQAYE 119

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           EA+HSH +  ++ S+  +  E+++M+R    + +K ++  Q Y +   +P+     K   
Sbjct: 120 EALHSHAYAVMVESISANTEEIYDMWRNDMQLKSKNDYIAQVYMELAKNPTEENILKVLF 179

Query: 183 SRILTRSLRFL 193
           +  +   + F 
Sbjct: 180 ANQILEGIYFY 190


>gi|207092116|ref|ZP_03239903.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori HPKX_438_AG0C1]
          Length = 341

 Score =  167 bits (424), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 45/191 (23%), Positives = 89/191 (46%), Gaps = 5/191 (2%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
                I       +V+++++     + +  L  +KY WA   + +   N W   EV M D
Sbjct: 3   VSRKKIYNPNSTESVNERKIFGGNPTSMFDLNKIKYQWADHLWKTMLANTWFAEEVSMND 62

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D   +     L+ +E++   R L      +SL  NN++  I   +++PE    L+RQA+E
Sbjct: 63  DKRDY---LKLSAEEKIGYDRALAQLIFMDSLQTNNLIDNINPFITSPEINLCLVRQAYE 119

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           EA+HSH +  ++ S+  +  E+++M+R    + +K ++  Q Y +   +P+     K   
Sbjct: 120 EALHSHAYAVMVESISANTEEIYDMWRNDMQLKSKNDYIAQVYMELAKNPTEENILKALF 179

Query: 183 SRILTRSLRFL 193
           +  +   + F 
Sbjct: 180 ANQILEGIYFY 190


>gi|217034470|ref|ZP_03439882.1| hypothetical protein HP9810_890g15 [Helicobacter pylori 98-10]
 gi|216943072|gb|EEC22549.1| hypothetical protein HP9810_890g15 [Helicobacter pylori 98-10]
 gi|317177841|dbj|BAJ55630.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori F16]
          Length = 341

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 89/191 (46%), Gaps = 5/191 (2%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
                I       +V+++++     + +  L  +KY WA   + +   N W   EV M D
Sbjct: 3   VSRKKIYNPNSTESVNERKIFGGNPTSMFDLNKIKYQWADHLWKTMLANTWFAEEVSMND 62

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D   +     L+ +E++   R L      +SL  NN++  +   +++PE    L+RQA+E
Sbjct: 63  DKRDY---LKLSAEEKIGYDRALAQLIFMDSLQTNNLIDNVNPFITSPEINLCLVRQAYE 119

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           EA+HSH +  ++ S+  +  E+++M+R    + +K ++  Q Y +   +P+     K   
Sbjct: 120 EALHSHAYAVMVESISANTEEIYDMWRNDMQLKSKNDYIAQVYMELAKNPTEENILKALF 179

Query: 183 SRILTRSLRFL 193
           +  +   + F 
Sbjct: 180 ANQILEGIYFY 190


>gi|15644992|ref|NP_207162.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori 26695]
 gi|2500210|sp|P55983|RIR2_HELPY RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|2313466|gb|AAD07432.1| ribonucleoside diphosphate reductase, beta subunit (nrdB)
           [Helicobacter pylori 26695]
          Length = 341

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 46/191 (24%), Positives = 90/191 (47%), Gaps = 5/191 (2%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
                I       +V+++++     + +  L  +KY WA   + +   N W   EV M D
Sbjct: 3   VSRKKIYNPNSTESVNERKIFGGNPTSMFDLNKIKYQWADHLWKTMLANTWFAEEVSMND 62

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D   +     L+ +E++   R L      +SL ANN++  I   +++PE    L+RQA+E
Sbjct: 63  DKRDY---LKLSAEEKIGYDRALAQLIFMDSLQANNLIDNINPFITSPEINLCLVRQAYE 119

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           EA+HSH +  ++ S+  +  E+++M+R    + +K ++  Q Y +   +P+     K   
Sbjct: 120 EALHSHAYAVMVESISANTEEIYDMWRNDMQLKSKNDYIAQVYMELAKNPTEENILKALF 179

Query: 183 SRILTRSLRFL 193
           +  +   + F 
Sbjct: 180 ANQILEGIYFY 190


>gi|297380266|gb|ADI35153.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori v225d]
 gi|308062365|gb|ADO04253.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Cuz20]
 gi|317180823|dbj|BAJ58609.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori F32]
          Length = 341

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 89/191 (46%), Gaps = 5/191 (2%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
                I       +V+++++     + +  L  +KY WA   + +   N W   EV M D
Sbjct: 3   VSRKKIYNPNSTESVNERKIFGGNPTSMFDLNKIKYQWADHLWKTMLANTWFAEEVSMND 62

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D   +     L+ +E++   R L      +SL  NN++  +   +++PE    L+RQA+E
Sbjct: 63  DKRDY---LKLSAEEKIGYDRALAQLIFMDSLQTNNLIDNVNPFITSPEINLCLVRQAYE 119

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           EA+HSH +  ++ S+  +  E+++M+R    + +K ++  Q Y +   +P+     K   
Sbjct: 120 EALHSHAYAVMVESISANTEEIYDMWRNDMQLKSKNDYIAQVYMELAKNPTEENILKALF 179

Query: 183 SRILTRSLRFL 193
           +  +   + F 
Sbjct: 180 ANQILEGIYFY 190


>gi|212693366|ref|ZP_03301494.1| hypothetical protein BACDOR_02879 [Bacteroides dorei DSM 17855]
 gi|237710423|ref|ZP_04540904.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
           9_1_42FAA]
 gi|237726931|ref|ZP_04557412.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
           D4]
 gi|212664010|gb|EEB24584.1| hypothetical protein BACDOR_02879 [Bacteroides dorei DSM 17855]
 gi|229433787|gb|EEO43864.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           dorei 5_1_36/D4]
 gi|229455145|gb|EEO60866.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
           9_1_42FAA]
          Length = 349

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 80/190 (42%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           + +   E   ++  +RM+   + ++N    ++Y W  + Y  A NN W+P E+ +  D  
Sbjct: 9   NALFNPEGDTDLRHRRMIGGNTTNLNDFNNMRYKWVSDWYRQAMNNFWIPEEINLTQDTK 68

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +     L   ER    + L F    +SL +NN+   I  +++  E    L  QAF+E V
Sbjct: 69  DY---PHLDQAERTAYDKILSFLVFLDSLQSNNLPT-ISEYITANEVNLCLHIQAFQECV 124

Query: 127 HSHTFQYIITSLGLDEG--ELFNMYREVPSITAKANWA-LQYTQTLSSPSFHYWNKRRRS 183
           HS ++ Y++ S+   E   E+   ++    +  +  +    Y +   S       K   +
Sbjct: 125 HSQSYSYMLDSICSPEKRNEILYQWKTDEHLLKRNTFIGNCYNEFQESQDGFTLMKTLIA 184

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 185 NYILEGIYFY 194


>gi|109947017|ref|YP_664245.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           acinonychis str. Sheeba]
 gi|109714238|emb|CAJ99246.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter
           acinonychis str. Sheeba]
          Length = 341

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 44/189 (23%), Positives = 90/189 (47%), Gaps = 5/189 (2%)

Query: 7   LSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
              I   +   +V+++++     + +  L  +KY WA   + +   N W   EV M DD 
Sbjct: 5   RKKIYNPDSTESVNERKIFGGNPTSMFDLNKIKYQWADHLWKTMLANTWFAEEVSMNDDK 64

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             +     L+ +E++   R L      +SL  NN++  +   +++PE    L+RQA+EEA
Sbjct: 65  RDY---LKLSAEEKIGYDRALAQLIFMDSLQTNNLIDNVNPFITSPEINLCLVRQAYEEA 121

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSR 184
           +HSH +  ++ S+  +  E+++M+R    + +K ++  Q Y +   +P+     K   + 
Sbjct: 122 LHSHAYAVMVESISANTEEIYDMWRNDMQLKSKNDYIAQVYMELAKNPTEENILKALFAN 181

Query: 185 ILTRSLRFL 193
            +   + F 
Sbjct: 182 QILEGIYFY 190


>gi|319936387|ref|ZP_08010803.1| ribonucleotide-diphosphate reductase subunit beta [Coprobacillus
           sp. 29_1]
 gi|319808502|gb|EFW05054.1| ribonucleotide-diphosphate reductase subunit beta [Coprobacillus
           sp. 29_1]
          Length = 346

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 85/191 (44%), Gaps = 8/191 (4%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
              +      ++V  +RM+N  + ++N    +KY W  + Y  A NN W+P E+ +  D+
Sbjct: 5   RKALFNASGDIDVRKRRMINGNTTNLNDFNNMKYNWVSDWYRQAMNNFWIPEEINLTQDI 64

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             ++    L + E+    + L F    +SL   N+   +  +++  E    L  QAF+EA
Sbjct: 65  KDYR---LLNEHEKTAYDKILSFLVFLDSLQTANLP-NVGEYITANEINLCLTIQAFQEA 120

Query: 126 VHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANWA-LQYTQTLSSPSFHYWNKRRR 182
           VHS ++ Y++ S+   ++  E+   ++    +  +  +   QY   L      ++ K   
Sbjct: 121 VHSQSYSYMLDSICSPIERDEILYQWKYDEHLLKRNEFIGEQYNAFLEHKDSFHFMKTVI 180

Query: 183 SRILTRSLRFL 193
           +  +   + F 
Sbjct: 181 ANYILEGIYFY 191


>gi|317011285|gb|ADU85032.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori SouthAfrica7]
          Length = 341

 Score =  167 bits (424), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 90/191 (47%), Gaps = 5/191 (2%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
                I   +   +V+++++     + +  L  +KY WA   + +   N W   EV M D
Sbjct: 3   VSRKKIYNPDSTESVNERKIFGGNPTSMFDLNKIKYQWADHLWKTMLANTWFAEEVSMND 62

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D   +     L+ +E++   R L      +SL  NN++  +   +++PE    L+RQA+E
Sbjct: 63  DKRDY---LKLSAEEKIGYDRALAQLIFMDSLQTNNLIDNVNPFITSPEINLCLVRQAYE 119

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           EA+HSH +  ++ S+  +  E+++M+R    + +K ++  Q Y +   +P+     K   
Sbjct: 120 EALHSHAYAVMVESISANTEEIYDMWRNDMQLKSKNDYIAQVYMELAKNPTEKNILKALF 179

Query: 183 SRILTRSLRFL 193
           +  +   + F 
Sbjct: 180 ANQILEGIYFY 190


>gi|317182342|dbj|BAJ60126.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori F57]
          Length = 341

 Score =  167 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 88/191 (46%), Gaps = 5/191 (2%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
                I       +V+++++     + +  L  +KY WA   + +   N W   EV M D
Sbjct: 3   VSRKKIYNPNSTESVNERKIFGGNPTSMFDLNKIKYQWADHLWKTMLANTWFAEEVSMND 62

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D   +     L+ +E++   R L      +SL  NN++  +   +++PE    L+RQA+E
Sbjct: 63  DKRDY---LKLSAEEKIGYDRALAQLIFMDSLQTNNLIDNVNPFITSPEINLCLVRQAYE 119

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           EA+HSH +  ++ S+  +  E+++M+R    +  K ++  Q Y +   +P+     K   
Sbjct: 120 EALHSHAYAVMVESISANTEEIYDMWRNDMQLKNKNDYIAQVYMELAKNPTEENILKALF 179

Query: 183 SRILTRSLRFL 193
           +  +   + F 
Sbjct: 180 ANQILEGIYFY 190


>gi|210616053|ref|ZP_03290925.1| hypothetical protein CLONEX_03144 [Clostridium nexile DSM 1787]
 gi|210149961|gb|EEA80970.1| hypothetical protein CLONEX_03144 [Clostridium nexile DSM 1787]
          Length = 355

 Score =  167 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 82/197 (41%), Gaps = 8/197 (4%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEV 59
           +       P+      + V  ++M+   + ++N    +KY W    Y  A NN W+P E+
Sbjct: 8   IMEQLKKRPLFNPNGDIQVQKRKMIGGNTTNLNDFNNMKYTWVSGWYRQAMNNFWIPEEI 67

Query: 60  PMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLR 119
            +  D+  +++   L   E+    + L F    +S+   N+   I  +++  E    L  
Sbjct: 68  NLGVDIKDYRN---LPKAEKRAYDKILSFLIFLDSIQTANLP-GISEYITANEVNLCLSI 123

Query: 120 QAFEEAVHSHTFQYIITSLGLD--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHY 176
           QAF+EAVHS ++ Y++ ++       E+   ++E   + A+  +    Y    +  S   
Sbjct: 124 QAFQEAVHSQSYSYMLDTICEPQERNEVLYQWKEDEHLLARNEFIGNLYNAFQTEKSMEM 183

Query: 177 WNKRRRSRILTRSLRFL 193
             K   +  +   + F 
Sbjct: 184 LVKTIVANYILEGIYFY 200


>gi|295103295|emb|CBL00839.1| Ribonucleotide reductase, beta subunit [Faecalibacterium
           prausnitzii SL3/3]
          Length = 347

 Score =  167 bits (424), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 77/190 (40%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
            P+   E   +V  +RM+   + ++N    +KY W  + Y  A NN W+P E+ +  D+ 
Sbjct: 7   KPLFNPEGDPDVRLRRMIGGNTTNLNDFNNMKYAWVSDWYRQAMNNFWIPEEINLSQDVK 66

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +     L   ER    + L F    +S+   N+   I  +++  E    L  QAF+E V
Sbjct: 67  DY---PRLLSTERSAYDKILSFLVFLDSIQTANLP-NIGAYITANEVNLCLSIQAFQECV 122

Query: 127 HSHTFQYIITSLGLD--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRS 183
           HS ++ Y++ ++       ++   ++    +  +  +    Y +           +   +
Sbjct: 123 HSQSYSYMLDTICSPVERNDILYQWKTDEHLLRRNTFIGDCYNEFQERKDAPTLLRVMMA 182

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 183 NYILEGIYFY 192


>gi|254779643|ref|YP_003057749.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori B38]
 gi|254001555|emb|CAX29573.1| Ribonucleoside-diphosphate reductase subunit beta (Ribonucleotide
           reductase small subunit) [Helicobacter pylori B38]
          Length = 341

 Score =  167 bits (423), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 90/191 (47%), Gaps = 5/191 (2%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
                I   +   +V+++++     + +  L  +KY WA   + +   N W   EV M D
Sbjct: 3   VSRKKIYNPDSTESVNERKIFGGNPTSMFDLNKIKYQWADHLWKTMLANTWFAEEVSMND 62

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D   +     L+ +E++   R L      +SL  NN++  +   +++PE    L+RQA+E
Sbjct: 63  DKRDY---LKLSTEEKIGYDRALAQLIFMDSLQTNNLIDNVNPFITSPEINLCLVRQAYE 119

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           EA+HSH +  ++ S+  +  E+++M+R    + +K ++  Q Y +   +P+     K   
Sbjct: 120 EALHSHAYAVMVESISANTEEIYDMWRNDMQLKSKNDYIAQVYMELAKNPTEENILKALF 179

Query: 183 SRILTRSLRFL 193
           +  +   + F 
Sbjct: 180 ANQILEGIYFY 190


>gi|317178607|dbj|BAJ56395.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori F30]
          Length = 341

 Score =  167 bits (423), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 89/191 (46%), Gaps = 5/191 (2%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
                I       +V+++++     + +  L  +KY WA   + +   N W   EV M D
Sbjct: 3   VSRKKIYNPNSTESVNERKIFGGNPTSMFDLNKIKYQWADHLWKTMLANTWFAEEVSMND 62

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D   +     L+ +E++   R L      +SL  NN++  +   +++PE    L+RQA+E
Sbjct: 63  DKRDY---LKLSTEEKIGYDRALAQLIFMDSLQTNNLIDNVNPFITSPEINLCLVRQAYE 119

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           EA+HSH +  ++ S+  +  E+++M+R    + +K ++  Q Y +   +P+     K   
Sbjct: 120 EALHSHAYAVMVESISANTEEIYDMWRNDMQLKSKNDYIAQVYMELAKNPTEENILKALF 179

Query: 183 SRILTRSLRFL 193
           +  +   + F 
Sbjct: 180 ANQILEGIYFY 190


>gi|256545921|ref|ZP_05473276.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
           vaginalis ATCC 51170]
 gi|256398343|gb|EEU11965.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
           vaginalis ATCC 51170]
          Length = 352

 Score =  167 bits (423), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 85/188 (45%), Gaps = 8/188 (4%)

Query: 10  IQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           I   E  +++  +R++N  + ++N    +KY W  + Y  A NN W+P E+ +  D+  +
Sbjct: 14  IFNEEGDIDLSKRRIINGNTTNLNDFNNVKYTWTSDWYRQAMNNFWIPEEINLNQDIKDY 73

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           ++   L+  E+    R L F    +S+   N+   +  +++  E    L  Q ++EA+HS
Sbjct: 74  RN---LSKAEKKAYDRILSFLTYLDSIQTANLP-NLQTYITANEINLCLAIQTYQEAIHS 129

Query: 129 HTFQYIITSLGLD--EGELFNMYREVPSITAKANWA-LQYTQTLSSPSFHYWNKRRRSRI 185
            ++ YI+ ++        +  +++E   +  +  +   QY + +   S     +   +  
Sbjct: 130 QSYSYILDTICSPDERTRILYLWKEDDHLLKRNKFIGDQYNEFIKDDSEFNLMRVLIANY 189

Query: 186 LTRSLRFL 193
           +   + F 
Sbjct: 190 ILEGIYFY 197


>gi|161760549|ref|NP_906664.2| ribonucleotide-diphosphate reductase subunit beta [Wolinella
           succinogenes DSM 1740]
          Length = 341

 Score =  167 bits (423), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 47/190 (24%), Positives = 89/190 (46%), Gaps = 4/190 (2%)

Query: 7   LSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
              I   +    V+++++     + + +L  +KY WA+  +     N W P EV M  D 
Sbjct: 4   RKKIYNPQSTETVNERKIFGGNPTSIFELNKIKYQWAYNLWKVMLANSWFPEEVNMTPDK 63

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             +    GLT  E+L   R L      +SL  NN++  +  ++++PE    L+RQAFEEA
Sbjct: 64  RDYN--GGLTPAEKLGYDRALSQLIFMDSLQTNNLIDNVNPYITSPEINLILVRQAFEEA 121

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKAN-WALQYTQTLSSPSFHYWNKRRRSR 184
           +HS ++  ++ S+  +  E++ M+R    + +K +  A  Y +   +P+     K   + 
Sbjct: 122 LHSQSYAVMVESISANTDEIYEMWRVDMQLKSKNDHIAGVYEELAKNPTDSAMLKAMFAN 181

Query: 185 ILTRSLRFLC 194
            +   + F  
Sbjct: 182 QILEGIYFYA 191


>gi|188527870|ref|YP_001910557.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Shi470]
 gi|188144110|gb|ACD48527.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Shi470]
 gi|308063873|gb|ADO05760.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Sat464]
          Length = 341

 Score =  167 bits (423), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 89/191 (46%), Gaps = 5/191 (2%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
                I       +V+++++     + +  L  +KY WA   + +   N W   EV M D
Sbjct: 3   VSRKKIYNPNSTESVNERKIFGGNPTSMFDLNKIKYQWADHLWKTMLANTWFAEEVSMND 62

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D   +     L+ +E++   R L      +SL  NN++  +   +++PE    L+RQA+E
Sbjct: 63  DKRDY---LKLSAEEKIGYDRALAQLIFMDSLQTNNLIDNVNPFITSPEINLCLVRQAYE 119

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           EA+HSH +  ++ S+  +  E+++M+R    + +K ++  Q Y +   +P+     K   
Sbjct: 120 EALHSHAYAVMVESISANTEEIYDMWRNDMQLKSKNDYIAQVYMELAKNPTEESILKALF 179

Query: 183 SRILTRSLRFL 193
           +  +   + F 
Sbjct: 180 ANQILEGIYFY 190


>gi|320536436|ref|ZP_08036471.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           phagedenis F0421]
 gi|320146705|gb|EFW38286.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           phagedenis F0421]
          Length = 363

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 41/189 (21%), Positives = 85/189 (44%), Gaps = 8/189 (4%)

Query: 9   PIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
            +      V +  +RM+   + ++N    LKY W  E Y  A NN W+P E+ M  D+  
Sbjct: 24  ALFNEHGDVELHKRRMIGGNTTNLNDFNNLKYPWVSEWYRQAMNNFWIPEEINMNTDVQD 83

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           ++    L+  E+    + L F    +S+   N+   + ++++  E    L  QAF+EAVH
Sbjct: 84  YRK---LSKAEKTAYDKILSFLIFLDSIQTANLP-NVGQYITANEVNLCLTIQAFQEAVH 139

Query: 128 SHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSR 184
           S ++ Y++ ++   E   ++   +++   + A+  +    Y + ++  S     K   + 
Sbjct: 140 SQSYSYMLDTICSPEERNDILYQWKDDEHLLARNKFIGNLYNEFVNDKSALALVKVAVAN 199

Query: 185 ILTRSLRFL 193
            +   + F 
Sbjct: 200 YILEGVYFY 208


>gi|265756566|ref|ZP_06090772.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp.
           3_1_33FAA]
 gi|263233754|gb|EEZ19369.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp.
           3_1_33FAA]
          Length = 349

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 80/190 (42%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           + +   E   ++  +RM+   + ++N    ++Y W  + Y  A NN W+P E+ +  D  
Sbjct: 9   NALFNPEGDTDLRHRRMIGGNTTNLNDFNNMRYKWVSDWYRQAMNNFWIPEEINLTQDTK 68

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +     L   ER    + L F    +SL +NN+   I  +++  E    L  QAF+E V
Sbjct: 69  DY---PHLDQAERTAYDKILSFLVFLDSLQSNNLPT-ISEYITANEVNLCLHIQAFQECV 124

Query: 127 HSHTFQYIITSLGLDEG--ELFNMYREVPSITAKANWA-LQYTQTLSSPSFHYWNKRRRS 183
           HS ++ Y++ S+   E   E+   ++    +  +  +    Y +   S       K   +
Sbjct: 125 HSQSYSYMLDSICSPEKRNEILYQWKTDEHLLKRNTFIGNCYNEFQESQDGFTLMKTLIA 184

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 185 NYILEGIYFY 194


>gi|15612081|ref|NP_223733.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori J99]
 gi|11387046|sp|Q9ZKC3|RIR2_HELPJ RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|4155613|gb|AAD06604.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 1 BETA CHAIN [Helicobacter
           pylori J99]
 gi|307637755|gb|ADN80205.1| Ribonucleotide reductase of classIa beta subunit [Helicobacter
           pylori 908]
 gi|325996356|gb|ADZ51761.1| Ribonucleotide reductase of class Ia beta subunit [Helicobacter
           pylori 2018]
 gi|325997944|gb|ADZ50152.1| Ribonucleosidase diphosphate reductase beta subunit [Helicobacter
           pylori 2017]
          Length = 341

 Score =  167 bits (423), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 46/191 (24%), Positives = 90/191 (47%), Gaps = 5/191 (2%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
                I       +V+++++     + +  L  +KY WA   + +   N W   EV M D
Sbjct: 3   VSRKKIYNPNSTESVNERKIFGGNPTSMFDLNKIKYQWADHLWKTMLANTWFAEEVSMND 62

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D   +     L+ +E++   R L      +SL ANN++  I   +++PE    L+RQA+E
Sbjct: 63  DKRDY---LKLSAEEKIGYDRALAQLIFMDSLQANNLIDNINPFITSPEINLCLVRQAYE 119

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           EA+HSH +  ++ S+  +  E+++M+R    + +K ++  Q Y +   +P+     K   
Sbjct: 120 EALHSHAYAVMVESISANTEEIYDMWRNDMQLKSKNDYIAQVYMELAKNPTEENILKALF 179

Query: 183 SRILTRSLRFL 193
           +  +   + F 
Sbjct: 180 ANQILEGIYFY 190


>gi|315586979|gb|ADU41360.1| ribonucleotide-diphosphate reductase beta subunit [Helicobacter
           pylori 35A]
          Length = 341

 Score =  166 bits (422), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 89/191 (46%), Gaps = 5/191 (2%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
                I       +V+++++     + +  L  +KY WA   + +   N W   EV M D
Sbjct: 3   VSRKKIYNPNSTESVNERKIFGGNPTSMFDLNKIKYQWADHLWKTMLANTWFAEEVSMND 62

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D   +     L+ +E++   R L      +SL  NN++  +   +++PE    L+RQA+E
Sbjct: 63  DKRDY---LKLSAEEKIGYDRALAQLIFMDSLQTNNLIDNVNPFITSPEINLCLVRQAYE 119

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           EA+HSH +  ++ S+  +  E+++M+R    + +K ++  Q Y +   +P+     K   
Sbjct: 120 EALHSHAYAVMVESISANTEEIYDMWRNDMQLKSKNDYIAQVYMELAKNPTEENILKVLF 179

Query: 183 SRILTRSLRFL 193
           +  +   + F 
Sbjct: 180 ANQILEGIYFY 190


>gi|208434985|ref|YP_002266651.1| ribonucleoside diphosphate reductase, beta subunit [Helicobacter
           pylori G27]
 gi|208432914|gb|ACI27785.1| ribonucleoside diphosphate reductase, beta subunit [Helicobacter
           pylori G27]
          Length = 341

 Score =  166 bits (422), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 46/191 (24%), Positives = 90/191 (47%), Gaps = 5/191 (2%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
                I       +V+++++     + +  L  +KY WA   + +   N W   EV M D
Sbjct: 3   VSRKKIYNPNSTESVNERKIFGGNPTSMFDLNKIKYQWADHLWKTMLANTWFAEEVSMND 62

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D   +     L+ +E++   R L      +SL ANN++  I   +++PE    L+RQA+E
Sbjct: 63  DKRDY---LKLSAEEKIGYDRALAQLIFMDSLQANNLIDNINPFITSPEINLCLVRQAYE 119

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           EA+HSH +  ++ S+  +  E+++M+R    + +K ++  Q Y +   +P+     K   
Sbjct: 120 EALHSHAYAVMVESISANTEEIYDMWRNDMQLKSKNDYIAQVYMELAKNPTEENILKALF 179

Query: 183 SRILTRSLRFL 193
           +  +   + F 
Sbjct: 180 ANQILEGIYFY 190


>gi|330837704|ref|YP_004412345.1| ribonucleotide reductase [Spirochaeta coccoides DSM 17374]
 gi|329749607|gb|AEC02963.1| ribonucleotide reductase [Spirochaeta coccoides DSM 17374]
          Length = 360

 Score =  166 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 83/191 (43%), Gaps = 8/191 (4%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
             PI        +D +RM+   + ++N    LKYGW  + Y  A NN W+P E+ M  D+
Sbjct: 19  RKPIFNEHGDTGLDKRRMVGGNTTNLNDFNNLKYGWTSDWYRQAMNNFWIPEEINMNTDV 78

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             ++    L+  E+    + L F    +S+   N+   + + ++  E    L  QAF+EA
Sbjct: 79  QDYR---RLSPAEKTAYDKILSFLIFLDSVQTANLP-NLAQFITANEVNLCLTIQAFQEA 134

Query: 126 VHSHTFQYIITSLGLDEGE--LFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           +HS ++ Y++ ++   +    +   +R+   + A+  +    Y   + +       K   
Sbjct: 135 IHSQSYSYMLDTICSPDERTGILYQWRDDAHLLARNKFIGDLYQNFMVNQDVCQIVKTMV 194

Query: 183 SRILTRSLRFL 193
           +  +   + F 
Sbjct: 195 ANYILEGIYFY 205


>gi|257456224|ref|ZP_05621421.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           vincentii ATCC 35580]
 gi|257446310|gb|EEV21356.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           vincentii ATCC 35580]
          Length = 351

 Score =  166 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 82/192 (42%), Gaps = 8/192 (4%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
               +      + V  ++M+   + ++N    +KY WA E Y  A NN W+P E+ M  D
Sbjct: 9   ARKKLFNETGDIEVHLRKMIGGNTTNLNDFNNMKYAWASEWYRQAMNNFWIPEEINMNAD 68

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           +  ++    L+  E+    + L F    +S+   N+   + ++++  E    L  QAF+E
Sbjct: 69  VQDYRK---LSPAEKTAYDKILSFLIFLDSIQTANLP-NVGQYITANEVNLCLTIQAFQE 124

Query: 125 AVHSHTFQYIITSLGLDEGE--LFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRR 181
           AVHS ++ Y++ ++   +    +   +++   +  +  +    Y +     S     K  
Sbjct: 125 AVHSQSYSYMLDTICSPDERTAILYQWKDDEHLLKRNKFIGDLYNEFQDDKSALALLKVA 184

Query: 182 RSRILTRSLRFL 193
            +  +   + F 
Sbjct: 185 VANYILEGVYFY 196


>gi|317014473|gb|ADU81909.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori Gambia94/24]
          Length = 341

 Score =  166 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 46/191 (24%), Positives = 90/191 (47%), Gaps = 5/191 (2%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
                I       +V+++++     + +  L  +KY WA   + +   N W   EV M D
Sbjct: 3   VSRKKIYNPNSTESVNERKIFGGNPTSMFDLNKIKYQWADHLWKTMLANTWFAEEVSMND 62

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D   +     L+ +E++   R L      +SL ANN++  I   +++PE    L+RQA+E
Sbjct: 63  DKRDY---LKLSAEEKIGYDRALAQLIFMDSLQANNLIDNINPFITSPEINLCLVRQAYE 119

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           EA+HSH +  ++ S+  +  E+++M+R    + +K ++  Q Y +   +P+     K   
Sbjct: 120 EALHSHAYAVMVESISANTEEIYDMWRNDMQLKSKNDYIAQVYMELAKNPTEENILKALF 179

Query: 183 SRILTRSLRFL 193
           +  +   + F 
Sbjct: 180 ANQILEGIYFY 190


>gi|15639047|ref|NP_218493.1| ribonucleotide-diphosphate reductase subunit beta [Treponema
           pallidum subsp. pallidum str. Nichols]
 gi|189025287|ref|YP_001933059.1| ribonucleotide-diphosphate reductase subunit beta [Treponema
           pallidum subsp. pallidum SS14]
 gi|6093976|sp|O83092|RIR2_TREPA RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|3322311|gb|AAC65049.1| ribonucleoside-diphosphate reductase, subunit beta (nrdB)
           [Treponema pallidum subsp. pallidum str. Nichols]
 gi|189017862|gb|ACD70480.1| ribonucleoside-diphosphate reductase, subunit beta [Treponema
           pallidum subsp. pallidum SS14]
 gi|291059468|gb|ADD72203.1| ribonucleoside-diphosphate reductase, beta subunit [Treponema
           pallidum subsp. pallidum str. Chicago]
          Length = 351

 Score =  166 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 39/192 (20%), Positives = 84/192 (43%), Gaps = 8/192 (4%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
               +      + +  +RM+   + ++N    +KY W  + Y  A NN W+P E+ M  D
Sbjct: 9   QRRALFNEAGDIELHKRRMVGGNTTNLNDFNNMKYPWVSKWYRQAMNNFWIPEEINMSSD 68

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           +  +++   L+  E+    + L F    +S+   N+   I ++++  E    L  QAF+E
Sbjct: 69  VQDYRN---LSAIEKTAYDKILSFLIFLDSIQTANLP-NIGQYITANEINLCLTIQAFQE 124

Query: 125 AVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRR 181
           AVHS ++ Y++ ++   E   ++   +++   + A+  +    Y +     S     K  
Sbjct: 125 AVHSQSYSYMLDTICSPEERNDILYQWKDDEHLLARNKFIGNLYNEFQDDKSVLALLKVA 184

Query: 182 RSRILTRSLRFL 193
            +  +   + F 
Sbjct: 185 IANYVLEGIYFY 196


>gi|150005609|ref|YP_001300353.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           vulgatus ATCC 8482]
 gi|254884474|ref|ZP_05257184.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
           4_3_47FAA]
 gi|294778581|ref|ZP_06744003.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides
           vulgatus PC510]
 gi|319640834|ref|ZP_07995547.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp.
           3_1_40A]
 gi|149934033|gb|ABR40731.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides
           vulgatus ATCC 8482]
 gi|254837267|gb|EET17576.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides sp.
           4_3_47FAA]
 gi|294447530|gb|EFG16108.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides
           vulgatus PC510]
 gi|317387646|gb|EFV68512.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp.
           3_1_40A]
          Length = 349

 Score =  166 bits (422), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 80/190 (42%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           + +   E   ++  +RM+   + ++N    ++Y W  + Y  A NN W+P E+ +  D  
Sbjct: 9   NALFNPEGDTDLRHRRMIGGNTTNLNDFNNMRYKWVSDWYRQAMNNFWIPEEINLTQDTK 68

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +     L   ER    + L F    +SL +NN+   I  +++  E    L  QAF+E V
Sbjct: 69  DY---PHLDQAERTAYDKILSFLVFLDSLQSNNLPT-ISEYITANEVNLCLHIQAFQECV 124

Query: 127 HSHTFQYIITSLGLDEG--ELFNMYREVPSITAKANWA-LQYTQTLSSPSFHYWNKRRRS 183
           HS ++ Y++ S+   E   E+   ++    +  +  +    Y +   S       K   +
Sbjct: 125 HSQSYSYMLDSICSPEKRNEILYQWKTDGHLLKRNTFIGNCYNEFQESQDGFTLMKTLIA 184

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 185 NYILEGIYFY 194


>gi|212697417|ref|ZP_03305545.1| hypothetical protein ANHYDRO_01987 [Anaerococcus hydrogenalis DSM
           7454]
 gi|325846383|ref|ZP_08169352.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
 gi|212675609|gb|EEB35216.1| hypothetical protein ANHYDRO_01987 [Anaerococcus hydrogenalis DSM
           7454]
 gi|325481567|gb|EGC84607.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
          Length = 352

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 85/188 (45%), Gaps = 8/188 (4%)

Query: 10  IQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           I   E  +++  +R++N  + ++N    +KY W  + Y  A NN W+P E+ +  D+  +
Sbjct: 14  IFNEEGDIDLSKRRIINGNTTNLNDFNNVKYTWTNDWYRQAMNNFWIPEEINLNQDIKDY 73

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           ++   L+  E+    R L F    +S+   N+   +  +++  E    L  Q ++EA+HS
Sbjct: 74  RN---LSKAEKKAYDRILSFLTYLDSIQTANLP-NLQTYITANEINLCLAIQTYQEAIHS 129

Query: 129 HTFQYIITSLGLD--EGELFNMYREVPSITAKANWA-LQYTQTLSSPSFHYWNKRRRSRI 185
            ++ YI+ ++        +  +++E   +  +  +   QY + +   S     +   +  
Sbjct: 130 QSYSYILDTICSPDERTRILYLWKEDEHLLKRNKFIGDQYNEFIKDDSEFNLMRVLIANY 189

Query: 186 LTRSLRFL 193
           +   + F 
Sbjct: 190 ILEGIYFY 197


>gi|182419335|ref|ZP_02950587.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           butyricum 5521]
 gi|237666940|ref|ZP_04526925.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           butyricum E4 str. BoNT E BL5262]
 gi|182376666|gb|EDT74238.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           butyricum 5521]
 gi|237658139|gb|EEP55694.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           butyricum E4 str. BoNT E BL5262]
          Length = 344

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 43/190 (22%), Positives = 87/190 (45%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
            P+        +  KR++N  + ++N    +KY W  + Y    NN W+P EV +  DL 
Sbjct: 6   KPLFNEFGDREITKKRLINGNTTNLNDFNNMKYTWVSDWYRQGMNNFWIPEEVNLSQDLK 65

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +++   L D+ER+   + L F    +S+   N+   I  +++  E    L  Q+F+EAV
Sbjct: 66  DYQN---LLDEERIAYDKILSFLIFLDSIQTANL-SNINNYITASEVNLCLTIQSFQEAV 121

Query: 127 HSHTFQYIITSLGLDEG--ELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRS 183
           HS ++ Y++ S+   E   E+   +++   +  +  +    Y + + +P+     K   +
Sbjct: 122 HSQSYSYMLDSICSPEKRNEILYQWKDDEILLNRNKFIGDLYNEFIDNPTEETLLKTLMA 181

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 182 NYILEGIYFY 191


>gi|67585619|ref|XP_665115.1| ribonucleotide reductase R2 subunit [Cryptosporidium hominis TU502]
 gi|54655552|gb|EAL34885.1| ribonucleotide reductase R2 subunit [Cryptosporidium hominis]
          Length = 296

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 41/151 (27%), Positives = 64/151 (42%), Gaps = 11/151 (7%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            Y  A  + W+  E+ +  D   W+S   L D ER  IK  L FFA+S+ +V  N+ +  
Sbjct: 1   MYKKAEASFWVTEEIDLSQDTRDWES---LKDPERHFIKYVLAFFAASDGIVMENLAVNF 57

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANW 161
            R +  PE R Y   Q   E +HS T+  +I     D  E   LF     + ++  KA W
Sbjct: 58  LREIQIPEARMYYAFQMSIEQIHSETYSLLIDRYITDIKERQMLFEAISHIEAVKKKAEW 117

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           A ++  +        + +R         + F
Sbjct: 118 ATKWMNS-----ERSFAERIIGFCAVEGILF 143


>gi|229495919|ref|ZP_04389645.1| ribonucleoside-diphosphate reductase, beta subunit [Porphyromonas
           endodontalis ATCC 35406]
 gi|229317232|gb|EEN83139.1| ribonucleoside-diphosphate reductase, beta subunit [Porphyromonas
           endodontalis ATCC 35406]
          Length = 346

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 80/190 (42%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
             +      + +  +R++N  + ++N    +KY W    Y +A NN W+P E+ +  D+ 
Sbjct: 6   KALFNEHGDIELSKRRLINGNTTNLNDFNNIKYPWVSNWYRTAMNNFWIPEEINLSQDVK 65

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            ++    L+  E+    + L F    +S+   N+   +  +++  E    L  QAF+EAV
Sbjct: 66  DYR---ILSKAEKTAYDKILSFLIFLDSIQTANLP-NVGEYITANEVNLCLTIQAFQEAV 121

Query: 127 HSHTFQYIITSLGLDEGE--LFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRS 183
           HS ++ Y++ ++   E    +   +R+   +  +  +    Y       +     +   +
Sbjct: 122 HSQSYSYMLDTICSPEERTSILYQWRDDEHLLRRNKFIGDIYNDFQLHKTPDQLARTMVA 181

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 182 NYILEGVYFY 191


>gi|225164890|ref|ZP_03727109.1| Ribonucleoside-diphosphate reductase [Opitutaceae bacterium TAV2]
 gi|224800504|gb|EEG18881.1| Ribonucleoside-diphosphate reductase [Opitutaceae bacterium TAV2]
          Length = 362

 Score =  166 bits (421), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 52/172 (30%), Positives = 93/172 (54%), Gaps = 2/172 (1%)

Query: 22  KRMLNARSDV-NQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           KR++N R  +   LLPLKY WA++ Y +   NHW P ++PM  D+  W+    +TD ER 
Sbjct: 26  KRVINGRETMTFNLLPLKYQWAYDLYRTMKANHWEPEDIPMGKDIEQWRDPRAVTDQERW 85

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
           +I+  +G+F+++E +V +NI       ++ PE +  L R A EE +H+ +  Y+I+SLG+
Sbjct: 86  IIRMGIGYFSAAEGIVGDNIQHVTRELVTAPELKLVLGRHAHEENIHADSLLYMISSLGI 145

Query: 141 DEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           +  E   M+ ++P+I  K  + ++ ++ L            +  +      F
Sbjct: 146 NPHECEAMFEDIPTIVRKNEFVVKNSRQLRR-DLDLTQPENKQLLARNMFLF 196


>gi|255658865|ref|ZP_05404274.1| ribonucleoside-diphosphate reductase, beta subunit [Mitsuokella
           multacida DSM 20544]
 gi|260849270|gb|EEX69277.1| ribonucleoside-diphosphate reductase, beta subunit [Mitsuokella
           multacida DSM 20544]
          Length = 347

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 38/189 (20%), Positives = 84/189 (44%), Gaps = 8/189 (4%)

Query: 9   PIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           P+   E  ++V  +R++   + ++N    LKY W  + Y  A NN W+P E+ +  D+  
Sbjct: 8   PLFNPEGDIDVTQRRLIGGNTTNMNDFNNLKYTWTADWYRQAMNNFWIPEEINLGQDVKD 67

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           ++    L   ER    + L F    +S+ + N+   +  +++  E    L  Q+F+E VH
Sbjct: 68  YRQ---LPAAERRAYDKILSFLVFLDSVQSANLP-NVSAYITANEVDLCLTIQSFQECVH 123

Query: 128 SHTFQYIITSLGLD--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSR 184
           S ++ Y++ ++       E+   +++   + A+  +    Y +     S   + +   + 
Sbjct: 124 SQSYSYMLDTIASPDERQEIIFQWKDDEHLLARNTFIGDLYNEFQQEQSRENFLRVLIAN 183

Query: 185 ILTRSLRFL 193
            +   + F 
Sbjct: 184 YILEGIYFY 192


>gi|323692021|ref|ZP_08106269.1| ribonucleoside-diphosphate reductase [Clostridium symbiosum
           WAL-14673]
 gi|323503944|gb|EGB19758.1| ribonucleoside-diphosphate reductase [Clostridium symbiosum
           WAL-14673]
          Length = 347

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 81/188 (43%), Gaps = 8/188 (4%)

Query: 10  IQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           +   +   ++  +RM+N  + ++N    +KY W    Y  A NN W+P E+ +  D+  +
Sbjct: 9   LFNPDGDTDLQSRRMINGNTTNLNDFNNMKYTWVSGWYRQAMNNFWVPEEINLGTDVKDY 68

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
                LT  ER    + L F    +S+   N+  AI  +++  E    L  Q F+EAVHS
Sbjct: 69  ---PLLTVGERRAYDKILSFLVFLDSIQTANLP-AIGEYITANEINLCLSIQIFQEAVHS 124

Query: 129 HTFQYIITSLGLD--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRI 185
            ++ Y++ ++       E+   ++    + A+  +    Y +     +   + K   +  
Sbjct: 125 QSYSYMLDTICEPQTRNEVLYQWKNDGHLLARNTFIGGLYNEFQKDKTPFAFVKTLIANY 184

Query: 186 LTRSLRFL 193
           +   + F 
Sbjct: 185 ILEGIYFY 192


>gi|317009697|gb|ADU80277.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           pylori India7]
          Length = 341

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 89/191 (46%), Gaps = 5/191 (2%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
                I       +V+++++     + +  L  +KY WA   + +   N W   EV M D
Sbjct: 3   VSRKKIYNPNSTESVNERKIFGGNPTSMFDLNKIKYQWADHLWKTMLANTWFAEEVSMND 62

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           D   +     L+ +E++   R L      +SL  NN++  +   +++PE    L+RQA+E
Sbjct: 63  DKRDY---LKLSVEEKIGYDRALAQLIFMDSLQTNNLIDNVNPFITSPEINLCLVRQAYE 119

Query: 124 EAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           EA+HSH +  ++ S+  +  E+++M+R    + +K ++  Q Y +   +P+     K   
Sbjct: 120 EALHSHAYAVMVESISANTEEIYDMWRNDMQLKSKNDYIAQVYMELAKNPTEENILKALF 179

Query: 183 SRILTRSLRFL 193
           +  +   + F 
Sbjct: 180 ANQILEGIYFY 190


>gi|322378346|ref|ZP_08052803.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           suis HS1]
 gi|322379688|ref|ZP_08054002.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           suis HS5]
 gi|321147887|gb|EFX42473.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           suis HS5]
 gi|321149232|gb|EFX43675.1| ribonucleotide-diphosphate reductase subunit beta [Helicobacter
           suis HS1]
          Length = 342

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 45/193 (23%), Positives = 91/193 (47%), Gaps = 5/193 (2%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           ++     I   + +  V D+++     + +  L  +KY WA + + +   N W P EV M
Sbjct: 2   DHLSRKKIYNPQSQEQVSDRQIFGGNPTSMFDLNKIKYPWASKLWKTMLTNTWFPEEVSM 61

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D   +     L+  E++   R L      +SL  NN++  I   +++PE    L+RQA
Sbjct: 62  HGDKNHY---LHLSPQEKIGYDRALAQLIFMDSLQTNNLIDNINPFITSPEINLCLVRQA 118

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKR 180
           +EEA+HSH++  ++ S+  +   ++ M+R   ++  K +   Q Y +  ++P+ +   K 
Sbjct: 119 YEEALHSHSYAVMVESISANSDSIYEMWRTDVALKNKNDCIAQIYMELSNNPTEYNLLKA 178

Query: 181 RRSRILTRSLRFL 193
             +  +   + F 
Sbjct: 179 LFANQILEGIYFY 191


>gi|323486976|ref|ZP_08092290.1| hypothetical protein HMPREF9474_04041 [Clostridium symbiosum
           WAL-14163]
 gi|323399688|gb|EGA92072.1| hypothetical protein HMPREF9474_04041 [Clostridium symbiosum
           WAL-14163]
          Length = 347

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 81/188 (43%), Gaps = 8/188 (4%)

Query: 10  IQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           +   +   ++  +RM+N  + ++N    +KY W    Y  A NN W+P E+ +  D+  +
Sbjct: 9   LFNPDGDTDLQSRRMINGNTTNLNDFNNMKYTWVSGWYRQAMNNFWVPEEINLGTDVKDY 68

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
                LT  ER    + L F    +S+   N+  AI  +++  E    L  Q F+EAVHS
Sbjct: 69  ---PLLTVGERRAYDKILSFLVFLDSIQTANLP-AIGEYITANEINLCLSIQIFQEAVHS 124

Query: 129 HTFQYIITSLGLD--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRI 185
            ++ Y++ ++       E+   ++    + A+  +    Y +     +   + K   +  
Sbjct: 125 QSYSYMLDTICEPQTRNEVLYQWKNDGHLLARNTFIGGLYNEFQKDKTPFAFVKTLIANY 184

Query: 186 LTRSLRFL 193
           +   + F 
Sbjct: 185 ILEGIYFY 192


>gi|150015087|ref|YP_001307341.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           beijerinckii NCIMB 8052]
 gi|149901552|gb|ABR32385.1| Ribonucleoside-diphosphate reductase [Clostridium beijerinckii
           NCIMB 8052]
          Length = 344

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 88/190 (46%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
            P+        +  KR++N  + ++N    +KY W  + Y    NN W+P EV +  DL 
Sbjct: 6   KPLFNELGDREISKKRIINGNTTNLNDFNNMKYSWVSDWYRQGMNNFWIPEEVNLSQDLK 65

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +++   L ++ER+   + L F    +S+   N+   I  +++  E    L  Q+F+EAV
Sbjct: 66  DYQN---LLEEERIAYDKILSFLIFLDSIQTANL-SNINNYITASEINLCLTIQSFQEAV 121

Query: 127 HSHTFQYIITSLGLDEG--ELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRS 183
           HS ++ Y++ S+   E   E+   +++   +  +  +    Y + + +P+ +   +   +
Sbjct: 122 HSQSYSYMLDSICSPEKRNEILYQWKDDDILLKRNKFIGDLYNEFIENPTEYNLLRTLMA 181

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 182 NYILEGIYFY 191


>gi|311977695|ref|YP_003986815.1| ribonucleoside-diphosphate reductase small chain [Acanthamoeba
           polyphaga mimivirus]
 gi|77416594|sp|Q7T6Y9|RIR2_MIMIV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|55664859|gb|AAQ09571.2| ribonucleotide reductase small subunit [Acanthamoeba polyphaga
           mimivirus]
 gi|308204332|gb|ADO18133.1| ribonucleoside-diphosphate reductase small chain [Acanthamoeba
           polyphaga mimivirus]
          Length = 417

 Score =  166 bits (420), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 5/151 (3%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
            + +L+ +S+   + P+KY   W+ Y     N+W   EV +  D+  W   N L+DD+R 
Sbjct: 98  KEPILSLKSEQYTVHPIKYQKVWDNYKDQMKNYWTVEEVDLAKDVNDWN--NHLSDDDRN 155

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I   L FFA+++ +V  NI   +   +   E       Q   E  H   +  ++T+   
Sbjct: 156 FIMHVLAFFAAADGIVNANIKENLIDVVKIKEAECAYGFQYAMENAHGEMYSLMLTTFVK 215

Query: 141 D---EGELFNMYREVPSITAKANWALQYTQT 168
           D     +L N  + +PSI  KA+W  ++ ++
Sbjct: 216 DDALRNKLINSIKTMPSIKKKADWCNKWIKS 246


>gi|168702494|ref|ZP_02734771.1| ribonucleoside-diphosphate reductase, beta subunit [Gemmata
           obscuriglobus UQM 2246]
          Length = 332

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 51/165 (30%), Positives = 82/165 (49%), Gaps = 5/165 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
            L P++Y   +E Y  A  N W   EV    DLA  + +  +T  ER +I R + FFA+ 
Sbjct: 10  TLRPMRYPPFFEMYKDAIKNTWTVDEVDFSTDLADLRGR--VTPAERHLIHRLVAFFATG 67

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD---EGELFNMY 149
           +S+V NN+VL +Y+H++ PE R YL RQ +EEA+H   +  ++ +   D       F   
Sbjct: 68  DSIVGNNLVLNLYKHVNAPEARMYLSRQLYEEALHVQFYLTLLDNYLPDMAAREAAFAAV 127

Query: 150 REVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             +PSI  KA++  ++  ++           RR+ +L       C
Sbjct: 128 DNIPSIKLKADFCFKWIDSIEGLDRLETRAHRRAFLLNLVCFAAC 172


>gi|315452596|ref|YP_004072866.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter felis
           ATCC 49179]
 gi|315131648|emb|CBY82276.1| ribonucleoside-diphosphate reductase beta chain [Helicobacter felis
           ATCC 49179]
          Length = 347

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 46/192 (23%), Positives = 87/192 (45%), Gaps = 5/192 (2%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           + G   I   +      D+R+     + +  L  +KY WA + + +  +N W P EV M 
Sbjct: 8   SLGRKKIYNPQSAEPAKDRRIFGGNPTGMFDLNQIKYQWAHKIWKTMLHNTWFPEEVSMH 67

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D   +     L+  E++   R L      +SL  NN++  I   +++PE    L+RQA+
Sbjct: 68  GDKTHY---LKLSTQEKIGYDRALAQLIFMDSLQTNNLIDNINPFITSPEINLCLVRQAY 124

Query: 123 EEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRR 181
           EEA+HSH++  ++ S+  +  E++ M+R   ++  K +   Q Y     + +     K  
Sbjct: 125 EEALHSHSYAVMVESISANSDEIYEMWRTDEALKNKNDCVAQVYMDLAHTQTERNLLKAL 184

Query: 182 RSRILTRSLRFL 193
            +  +   + F 
Sbjct: 185 VANQILEGIYFY 196


>gi|257462865|ref|ZP_05627271.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium sp.
           D12]
          Length = 348

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 46/198 (23%), Positives = 89/198 (44%), Gaps = 8/198 (4%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEV 59
           M        +   E   ++ +++++    +++  L  +K+ WA + Y +   N W+P +V
Sbjct: 1   MKAAVDRKRLFNPEGNDSLLERKIIKGNSTNLFNLNNVKFSWATQLYRTMMANFWIPEKV 60

Query: 60  PMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLR 119
            +  D   +++   LT  ER      L F    +S+  NN+   I  +++ PE    L  
Sbjct: 61  DLTQDKNDYEN---LTVPEREAYDGILSFLIFLDSIQTNNLP-NISDYITAPEVNLLLSI 116

Query: 120 QAFEEAVHSHTFQYIITSLGLDEGE--LFNMYREVPSITAKANWALQ-YTQTLSSPSFHY 176
           Q F+EA+HS ++QYII S+   E    +++ +R+   +  +  +  Q Y   +   S   
Sbjct: 117 QTFQEAIHSQSYQYIIESILPKESRDLIYDKWRDDKVLFERNRFIAQIYQDFIEETSDQN 176

Query: 177 WNKRRRSRILTRSLRFLC 194
           + K   +  L  SL F  
Sbjct: 177 FAKVLIANYLLESLYFYN 194


>gi|328950373|ref|YP_004367708.1| Ribonucleoside-diphosphate reductase [Marinithermus hydrothermalis
           DSM 14884]
 gi|328450697|gb|AEB11598.1| Ribonucleoside-diphosphate reductase [Marinithermus hydrothermalis
           DSM 14884]
          Length = 332

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 60/176 (34%), Positives = 93/176 (52%), Gaps = 4/176 (2%)

Query: 19  VDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
             D R+    S +  +L PL + WA+       +N W P EVP+ +D+  W  K  LT++
Sbjct: 2   KRDHRLFGPPSLEAIELFPLAHPWAYAHVQQGKHNTWFPEEVPLGEDVRDWHEK--LTEE 59

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           ER      LGFF   ESLV  N+VLAI+ ++  PE R YL RQ +EEA H+  F+Y++ +
Sbjct: 60  ERHAASLLLGFFNPMESLVTQNLVLAIFPYVRAPEARLYLARQIWEEANHTMAFEYVLKT 119

Query: 138 LGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS-FHYWNKRRRSRILTRSLRF 192
           L +D  ++F  +REVP++ AK  +    TQ L          +  +  +L   + +
Sbjct: 120 LPVDREKVFAAHREVPAVRAKEAFQTALTQALLQQHPLDLETRSGQEALLKNLVGY 175


>gi|283768723|ref|ZP_06341634.1| ribonucleoside-diphosphate reductase, beta subunit [Bulleidia
           extructa W1219]
 gi|283104509|gb|EFC05882.1| ribonucleoside-diphosphate reductase, beta subunit [Bulleidia
           extructa W1219]
          Length = 348

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 43/197 (21%), Positives = 84/197 (42%), Gaps = 8/197 (4%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLN-ARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEV 59
           M+      P+   E  ++V  +R+LN   +++N    +KY W    Y  A NN W+P E+
Sbjct: 1   MSKGIQRKPLFNPEGDIDVCHRRLLNFDTTNINDFNNMKYTWVSNWYRQAMNNFWIPEEI 60

Query: 60  PMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLR 119
            +  D + +     L+  ER    + L F    +SL + N+   I  +++  E    L  
Sbjct: 61  NLNQDKSDY---LNLSLAERSAYDKILSFLVYLDSLQSANLP-NIASYVTANEVNLCLSI 116

Query: 120 QAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA-LQYTQTLSSPSFHY 176
           Q F+E +HS ++ Y++ S+   E   E+   ++    +  +  +    Y + L       
Sbjct: 117 QTFQECIHSQSYSYMLDSICSPEQRNEILYQWKYDEHLLKRNTFIGHLYNEFLEYQDKQS 176

Query: 177 WNKRRRSRILTRSLRFL 193
           + K   +  +   + F 
Sbjct: 177 FLKVCIANFILEGIYFY 193


>gi|223983469|ref|ZP_03633655.1| hypothetical protein HOLDEFILI_00935 [Holdemania filiformis DSM
           12042]
 gi|223964641|gb|EEF68967.1| hypothetical protein HOLDEFILI_00935 [Holdemania filiformis DSM
           12042]
          Length = 348

 Score =  165 bits (419), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 84/197 (42%), Gaps = 8/197 (4%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEV 59
           M+ +     +   +   +V  +RM+N  + ++N    LKYGW  + Y  A NN W+P E+
Sbjct: 1   MSESLKRKALFNAQGDTDVRRRRMINGNTTNLNDFNTLKYGWVSDWYRQAMNNFWIPEEI 60

Query: 60  PMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLR 119
            +  DL  +     L    +  + + L F    +S+   N+   I   ++  E    L  
Sbjct: 61  NLGQDLKDY---PKLEPAVKTALDKTLSFLIFLDSIQTANLP-NIGEVITANEINLCLTI 116

Query: 120 QAFEEAVHSHTFQYIITSLGLD--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHY 176
           QAF+EAVHS ++ Y++ S        E+   ++E P +  +  +    Y + +   +   
Sbjct: 117 QAFQEAVHSQSYSYMLDSFCSPDQRTEILYQWKEDPRLLKRNEFIGGLYNEFIEQRTPVQ 176

Query: 177 WNKRRRSRILTRSLRFL 193
             K   +  +   + F 
Sbjct: 177 LMKTLIANYILEGIYFY 193


>gi|239628850|ref|ZP_04671881.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239518996|gb|EEQ58862.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 347

 Score =  165 bits (418), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 80/190 (42%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
             +   +   + + +RM+   + ++N    +KY WA   Y  A NN W+P E+ +  D+ 
Sbjct: 7   KSLFNPQGDTDKNSRRMIGGNTTNLNDFNNMKYTWASAWYRQAMNNFWIPEEINLSTDVK 66

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +++   L+  ER    + L F    +S+   N+   I ++++  E    L  Q F+EAV
Sbjct: 67  DYRN---LSAAEREAFDKILSFLVFLDSIQTANLPC-IGQYITANEVNLCLTIQGFQEAV 122

Query: 127 HSHTFQYIITSLGLD--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRS 183
           HS ++ Y++ S+        +   ++E   +  +  +    Y +           +   +
Sbjct: 123 HSQSYSYMLDSICSPVERDRILYQWKEDGHLLKRNTFIGNLYNEFQERKDDITLLRVMMA 182

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 183 NYILEGIYFY 192


>gi|225386408|ref|ZP_03756172.1| hypothetical protein CLOSTASPAR_00155 [Clostridium asparagiforme
           DSM 15981]
 gi|225047489|gb|EEG57735.1| hypothetical protein CLOSTASPAR_00155 [Clostridium asparagiforme
           DSM 15981]
          Length = 347

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 79/190 (41%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
            P+   +    V+ +RM+   + ++N    +KY W    Y  A NN W+P E+ M  D+ 
Sbjct: 7   KPLFNPQGDTEVNLRRMIGGNTTNLNDFNNMKYAWVSGWYRQAMNNFWIPEEINMSSDIK 66

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +     L + ER    + L F    +S+   N+   I ++++  E    L  Q F+EAV
Sbjct: 67  DY---PELPEAERTAYDKILSFLIFLDSIQTANLP-NIGQYITANEVNLCLTIQGFQEAV 122

Query: 127 HSHTFQYIITSLGLD--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRS 183
           HS ++ Y++ ++        +   +++   +  +  +  + Y +           +   +
Sbjct: 123 HSQSYSYMLDTICSPVERNTILYQWKDDEHLLRRNTFIGELYNEFQDKKDAQTLLRVMMA 182

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 183 NYILEGIYFY 192


>gi|310831442|ref|YP_003970085.1| putative ribonucleoside-diphosphate reductase small subunit
           [Cafeteria roenbergensis virus BV-PW1]
 gi|309386626|gb|ADO67486.1| putative ribonucleoside-diphosphate reductase small subunit
           [Cafeteria roenbergensis virus BV-PW1]
          Length = 326

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 41/175 (23%), Positives = 77/175 (44%), Gaps = 11/175 (6%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L + +    + P+KY   W+ Y       W   E+    D   +K    L  DE+ 
Sbjct: 7   NEELLKSENSRYTVFPIKYHKIWDLYKKMEAAFWTAEEIDWSKDKHDFKK---LNQDEQR 63

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            IK  L FF++S+++V  N+   +   +   E +     Q   E +HS  +   I ++  
Sbjct: 64  FIKYVLAFFSASDTIVNINLGERLSHEVQPLEAKIAYTFQMMMEGIHSEVYALQIDNIIE 123

Query: 141 DEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           D  E   + N    VP I AK +W L++ ++  S     +  R  +++++  L F
Sbjct: 124 DVQERKDILNSIETVPCIKAKTDWMLKWVKSEES-----FATRMVAQVISEGLFF 173


>gi|27923845|sp|Q9QTF2|RIR2_RSIV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|5688956|dbj|BAA82755.1| ribonucleotide reductase small subunit [Red sea bream iridovirus]
 gi|327396894|dbj|BAK14260.1| ribonucleotide diphosphate reductase small subunit [Red sea bream
           iridovirus]
          Length = 312

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 48/168 (28%), Positives = 71/168 (42%), Gaps = 18/168 (10%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           D   L P      W  Y  A  + W   EV +  D+  W  K  LT+ ER  +   L FF
Sbjct: 2   DRYVLRP-NDPHLWAMYKKAVASFWTVEEVDLSTDVRHWTDK--LTEAERRFMSHILAFF 58

Query: 90  ASSESLVANNIVLAIYRHLS-NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE--LF 146
           A ++ +V +N+V    + L   PE R +   Q   E +H+  +  +I +L   E +  LF
Sbjct: 59  AMADGIVGDNLVCNFAKELDHIPEARAFYGFQVAIENIHAEMYTQLIITLVAKENQAALF 118

Query: 147 NMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           +   ++P + AKA WA Q+      P            I TR L F  
Sbjct: 119 SAAEDMPCVKAKAQWAAQWLNATHKP------------IATRLLAFAA 154


>gi|291165654|gb|EFE27703.1| ribonucleoside-diphosphate reductase, beta subunit [Filifactor
           alocis ATCC 35896]
          Length = 348

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 87/197 (44%), Gaps = 8/197 (4%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEV 59
           M        +      + +  +RM+N  + ++N    +KY W  + Y  A NN W+P E+
Sbjct: 1   MVEEIKRKQLFNENGDIELSKRRMINGNTTNLNDFNNMKYTWVSDWYRHAMNNFWIPEEI 60

Query: 60  PMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLR 119
            +  D+  +++   L  +E+    + L F    +SL   N+   +   ++  E    L  
Sbjct: 61  NLTQDIKDYRN---LEIEEKEAYDKILSFLIFLDSLQTANLP-NVGEFITANEVNLCLTI 116

Query: 120 QAFEEAVHSHTFQYIITSLGLDEG--ELFNMYREVPSITAKANWA-LQYTQTLSSPSFHY 176
           QA++EA+HS ++ YI+ S+   E   E+   +++ P + A+  +   QY     + + + 
Sbjct: 117 QAYQEAIHSQSYGYILDSICSPEERTEILYQWKDDPFLLARNKFIGDQYNDFYYNRTKYN 176

Query: 177 WNKRRRSRILTRSLRFL 193
             K   +  +   + F 
Sbjct: 177 LVKTVIANYILEGIYFY 193


>gi|62421216|gb|AAX82336.1| ribonucleotide reductase small chain [Orange-spotted grouper
           iridovirus]
          Length = 312

 Score =  165 bits (417), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 48/168 (28%), Positives = 71/168 (42%), Gaps = 18/168 (10%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           D   L P      W  Y  A  + W   EV +  D+  W  K  LT+ ER  +   L FF
Sbjct: 2   DRYVLRP-NDPHLWAMYKKAVASFWTVEEVDLSTDVRHWTDK--LTEAERRFMSHILAFF 58

Query: 90  ASSESLVANNIVLAIYRHLS-NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE--LF 146
           A ++ +V +N+V    + L   PE R +   Q   E +H+  +  +I +L   E +  LF
Sbjct: 59  AMADGIVGDNLVCNFAKELDHIPEARAFYGFQVAIENIHAEMYTQLIITLVAKENQAALF 118

Query: 147 NMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           +   ++P + AKA WA Q+      P            I TR L F  
Sbjct: 119 SAAEDMPCVKAKAQWAAQWLNATHKP------------IATRLLAFAA 154


>gi|224539244|ref|ZP_03679783.1| hypothetical protein BACCELL_04146 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224519126|gb|EEF88231.1| hypothetical protein BACCELL_04146 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 349

 Score =  164 bits (416), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 80/196 (40%), Gaps = 8/196 (4%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           A     + +        +  ++M+   + ++N    ++Y W  + Y  A NN W+P E+ 
Sbjct: 3   AKKLKRNALFNPSGDTEIRLRKMIGGNTTNLNDFNNMRYKWVSDWYRQAMNNFWIPEEIN 62

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           +  D   +     L + ER    + L F    +SL +NN+   I  +++  E    L  Q
Sbjct: 63  LTQDTKDY---PLLDEAERTAYDKILSFLVFLDSLQSNNLPT-ISEYITANEVNLCLHIQ 118

Query: 121 AFEEAVHSHTFQYIITSLGLDEG--ELFNMYREVPSITAKANWA-LQYTQTLSSPSFHYW 177
           AF+E VHS ++ Y++ ++   E   ++   ++    +  +  +    Y +   S      
Sbjct: 119 AFQECVHSQSYSYMLDTICSPEKRNDILYQWKTDEHLLKRNTFIGNCYNEFQESQDGFTL 178

Query: 178 NKRRRSRILTRSLRFL 193
            K   +  +   + F 
Sbjct: 179 MKTLIANYILEGIYFY 194


>gi|317060491|ref|ZP_07924976.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. D12]
 gi|313686167|gb|EFS23002.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. D12]
          Length = 344

 Score =  164 bits (416), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 45/189 (23%), Positives = 88/189 (46%), Gaps = 8/189 (4%)

Query: 10  IQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           +   E   ++ +++++    +++  L  +K+ WA + Y +   N W+P +V +  D   +
Sbjct: 6   LFNPEGNDSLLERKIIKGNSTNLFNLNNVKFSWATQLYRTMMANFWIPEKVDLTQDKNDY 65

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           ++   LT  ER      L F    +S+  NN+   I  +++ PE    L  Q F+EA+HS
Sbjct: 66  EN---LTVPEREAYDGILSFLIFLDSIQTNNLP-NISDYITAPEVNLLLSIQTFQEAIHS 121

Query: 129 HTFQYIITSLGLDEGE--LFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRI 185
            ++QYII S+   E    +++ +R+   +  +  +  Q Y   +   S   + K   +  
Sbjct: 122 QSYQYIIESILPKESRDLIYDKWRDDKVLFERNRFIAQIYQDFIEETSDQNFAKVLIANY 181

Query: 186 LTRSLRFLC 194
           L  SL F  
Sbjct: 182 LLESLYFYN 190


>gi|293401949|ref|ZP_06646089.1| ribonucleoside-diphosphate reductase, beta subunit
           [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291304607|gb|EFE45856.1| ribonucleoside-diphosphate reductase, beta subunit
           [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 347

 Score =  164 bits (416), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 84/191 (43%), Gaps = 8/191 (4%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
             P+       +V ++RM+N  + ++N    +KY W  + Y  A NN W+P E+ +  D+
Sbjct: 6   RKPLFNEHGDCDVINRRMINGNTTNLNDFNNMKYTWVSDWYRQAMNNFWIPEEINLNQDV 65

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             ++    L+  E+    + L F    +S+   N+   +  +++  E    L  QAF+EA
Sbjct: 66  KDYR---RLSQAEKNAYDKTLSFLIFLDSIQTANLP-NVGDYITANEVNLCLTIQAFQEA 121

Query: 126 VHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           +HS ++ Y++ S+    +  ++   ++    +  +  +    Y   ++     +  K   
Sbjct: 122 LHSQSYSYMLDSICSSQERNDILYQWKNDARLLERNKFIGDLYNDFITHHDGIHLMKTMM 181

Query: 183 SRILTRSLRFL 193
           +  +   + F 
Sbjct: 182 ANYILEGIYFY 192


>gi|257792030|ref|YP_003182636.1| ribonucleotide-diphosphate reductase subunit beta [Eggerthella
           lenta DSM 2243]
 gi|317488666|ref|ZP_07947206.1| ribonucleotide reductase [Eggerthella sp. 1_3_56FAA]
 gi|257475927|gb|ACV56247.1| Ribonucleoside-diphosphate reductase [Eggerthella lenta DSM 2243]
 gi|316912225|gb|EFV33794.1| ribonucleotide reductase [Eggerthella sp. 1_3_56FAA]
          Length = 347

 Score =  164 bits (416), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 82/190 (43%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
            P+       +V D+RM+   + ++N    +KY W  + Y  A NN W+P E+ +  D+ 
Sbjct: 7   KPLFNPLGDTDVLDRRMIGGNTTNLNDFNNMKYEWVSDWYRQAMNNFWIPEEINLGVDIK 66

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            ++    L   ER    + L F    +SL + N+  A+  +++  E    L  Q F+E V
Sbjct: 67  DYRK---LPAAERRAYDKILSFLIFLDSLQSANLP-AVGEYITANEVNLCLAIQTFQETV 122

Query: 127 HSHTFQYIITSLGLD--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRS 183
           HS ++ Y++ ++       ++   ++E   + A+  +    Y Q     S     +   +
Sbjct: 123 HSQSYSYMLDTICEPQERNDVLYQWKEDEHLLARNEFIGNLYNQFQDDKSPEALARVLVA 182

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 183 NYILEGVYFY 192


>gi|260591988|ref|ZP_05857446.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           veroralis F0319]
 gi|260536272|gb|EEX18889.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           veroralis F0319]
          Length = 348

 Score =  164 bits (416), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 82/197 (41%), Gaps = 8/197 (4%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEV 59
           M +    + +      V++  +RM+   + ++N    +KY W  + Y  A NN W+P E+
Sbjct: 1   MEDKLKRNTLFNPSGDVDLRLRRMIGGNTTNLNDFNNMKYSWVSDWYRQAMNNFWIPEEI 60

Query: 60  PMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLR 119
            +  D   +K    L   ER    + L F    +SL +NN+   +  +++  E    L  
Sbjct: 61  NLSQD---FKDYPRLDKAERTAYDKILSFLVFLDSLQSNNLPT-VSEYITANEVNLCLHI 116

Query: 120 QAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQ-YTQTLSSPSFHY 176
           QAF+E +HS ++ Y++ ++   E   ++   ++    +  +  +    Y +         
Sbjct: 117 QAFQECIHSQSYSYMLDTICSPEERNDILYQWKTDEHLLNRNKFIGDCYNEFHEKRDKFS 176

Query: 177 WNKRRRSRILTRSLRFL 193
             K   +  +   + F 
Sbjct: 177 LMKTLIANFILEGIYFY 193


>gi|256846215|ref|ZP_05551673.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_36A2]
 gi|256719774|gb|EEU33329.1| ribonucleoside-diphosphate reductase, beta subunit [Fusobacterium
           sp. 3_1_36A2]
          Length = 344

 Score =  164 bits (416), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 44/192 (22%), Positives = 87/192 (45%), Gaps = 8/192 (4%)

Query: 7   LSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
              +   E    ++ ++++    +++  L  ++  WA + Y +   N W+P +V +  D 
Sbjct: 3   RKKLFNPEGDDTLNARKIIKGNSTNLFNLNNVRCQWANQLYRTMMANFWIPEKVDLTQDK 62

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             +++   LT  ER      L F    +S+  NNI   I  H++ PE    L  Q F+EA
Sbjct: 63  NDYEN---LTVPEREAYDGILSFLIFLDSIQTNNIP-NISDHVTAPEVNLLLAIQTFQEA 118

Query: 126 VHSHTFQYIITSLGLDEGE--LFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           +HS ++QYII S+   +    +++ +R+   +  + ++  + Y   +   S   + K   
Sbjct: 119 IHSQSYQYIIESILPKQSRDLIYDKWRDDKVLFERNSFIAKIYQDFIDEQSDENFAKVII 178

Query: 183 SRILTRSLRFLC 194
           +  L  SL F  
Sbjct: 179 ANYLLESLYFYN 190


>gi|297587320|ref|ZP_06945965.1| ribonucleotide-diphosphate reductase beta subunit [Finegoldia magna
           ATCC 53516]
 gi|297575301|gb|EFH94020.1| ribonucleotide-diphosphate reductase beta subunit [Finegoldia magna
           ATCC 53516]
          Length = 354

 Score =  164 bits (416), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 86/188 (45%), Gaps = 8/188 (4%)

Query: 10  IQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           +      + +  ++++N  + ++N    +KY W  E Y  A NN W+P E+ +  D+  +
Sbjct: 16  LFNEHGDIELSKRKIINGNTTNLNDFNNIKYSWTSEWYRQAMNNFWIPEEINLNQDIKDY 75

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           ++   L++DE++   + L F    +SL    +   +  +++  E    L  QAF+E++HS
Sbjct: 76  RN---LSEDEKIAYDKILSFLIYLDSLQTAQLP-NLEAYITANEINLCLSIQAFQESIHS 131

Query: 129 HTFQYIITSLGLDEG--ELFNMYREVPSITAKANWA-LQYTQTLSSPSFHYWNKRRRSRI 185
            ++ YI+ ++   E   ++   +++   +  +  +   QY       S   + K   +  
Sbjct: 132 QSYSYILDTICSPEERTDILYQWKDDEFLLERNRFIGDQYNDFFEEKSERNFMKALIANY 191

Query: 186 LTRSLRFL 193
           +   + F 
Sbjct: 192 ILEGIYFY 199


>gi|257467364|ref|ZP_05631675.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|315918494|ref|ZP_07914734.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|313692369|gb|EFS29204.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           gonidiaformans ATCC 25563]
          Length = 344

 Score =  164 bits (415), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 46/189 (24%), Positives = 88/189 (46%), Gaps = 8/189 (4%)

Query: 10  IQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           +   E   ++ ++R++    +++  L  +K+ WA + Y +   N W+P +V +  D   +
Sbjct: 6   LFNPEGNDSLLERRIIKGNSTNLFNLNNVKFTWATQLYRTMMANFWIPEKVDLTQDKNDY 65

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           ++   LT  ER      L F    +S+  NN+   I  +++ PE    L  Q F+EA+HS
Sbjct: 66  EN---LTVPEREAYDGILSFLIFLDSIQTNNVP-NISDYVTAPEVNLLLSIQTFQEAIHS 121

Query: 129 HTFQYIITSLGLDEGE--LFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRI 185
            ++QYII S+   E    +++ +R+   +  +  +  Q Y   +   S   + K   +  
Sbjct: 122 QSYQYIIESILPKESRDLIYDKWRDDKILFERNRFIAQIYQDFIEEASDKNFAKVLVANY 181

Query: 186 LTRSLRFLC 194
           L  SL F  
Sbjct: 182 LLESLYFYN 190


>gi|169824933|ref|YP_001692544.1| ribonucleotide-diphosphate reductase subunit beta [Finegoldia magna
           ATCC 29328]
 gi|167831738|dbj|BAG08654.1| ribonucleoside-diphosphate reductase beta subunit [Finegoldia magna
           ATCC 29328]
          Length = 354

 Score =  164 bits (415), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 86/188 (45%), Gaps = 8/188 (4%)

Query: 10  IQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           +      + +  ++++N  + ++N    +KY W  E Y  A NN W+P E+ +  D+  +
Sbjct: 16  LFNEHGDIELSKRKIINGNTTNLNDFNNIKYSWTSEWYRQAMNNFWIPEEINLNQDIKDY 75

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           ++   L++DE++   + L F    +SL    +   +  +++  E    L  QAF+E++HS
Sbjct: 76  RN---LSEDEKIAYDKILSFLIYLDSLQTAQLP-NLEAYITANEINLCLSIQAFQESIHS 131

Query: 129 HTFQYIITSLGLDEG--ELFNMYREVPSITAKANWA-LQYTQTLSSPSFHYWNKRRRSRI 185
            ++ YI+ ++   E   ++   +++   +  +  +   QY       S   + K   +  
Sbjct: 132 QSYSYILDTICSPEERTDILYQWKDDEFLLERNRFIGDQYNDFFEKKSERNFMKALIANY 191

Query: 186 LTRSLRFL 193
           +   + F 
Sbjct: 192 ILEGIYFY 199


>gi|325859841|ref|ZP_08172971.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           denticola CRIS 18C-A]
 gi|325482767|gb|EGC85770.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           denticola CRIS 18C-A]
          Length = 348

 Score =  164 bits (415), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 81/197 (41%), Gaps = 8/197 (4%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEV 59
           M N    + +       ++  KRM+   + ++N    +KY W  + Y  A NN W+P E+
Sbjct: 1   MDNKLKRNTLFNPSGDTDLRLKRMIGGNTTNLNDFNNMKYSWVSDWYRQAMNNFWIPEEI 60

Query: 60  PMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLR 119
            +  D   +K    L   ER    + L F    +SL +NN+   +  +++  E    L  
Sbjct: 61  NLSQD---FKDYPRLDKAERTAYDKILSFLVFLDSLQSNNLPT-VSEYITANEVNLCLHI 116

Query: 120 QAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQ-YTQTLSSPSFHY 176
           QAF+E +HS ++ Y++ ++   E   ++   ++    +  +  +    Y +         
Sbjct: 117 QAFQECIHSQSYSYMLDTICSPEERNDILYQWKTDEHLLNRNKFIGDCYNEFHEKRDKFS 176

Query: 177 WNKRRRSRILTRSLRFL 193
             K   +  +   + F 
Sbjct: 177 LMKTLIANFILEGIYFY 193


>gi|325831705|ref|ZP_08164922.1| ribonucleoside-diphosphate reductase, beta subunit [Eggerthella sp.
           HGA1]
 gi|325486576|gb|EGC89025.1| ribonucleoside-diphosphate reductase, beta subunit [Eggerthella sp.
           HGA1]
          Length = 347

 Score =  164 bits (415), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 82/190 (43%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
            P+       +V D+RM+   + ++N    +KY W  + Y  A NN W+P E+ +  D+ 
Sbjct: 7   KPLFNPLGDTDVLDRRMIGGNTTNLNDFNNMKYEWVSDWYRQAMNNFWIPEEINLGVDIK 66

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            ++    L   ER    + L F    +SL + N+  A+  +++  E    L  Q F+E V
Sbjct: 67  DYRK---LPASERRAYDKILSFLIFLDSLQSANLP-AVGEYITANEVNLCLAIQTFQETV 122

Query: 127 HSHTFQYIITSLGLD--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRS 183
           HS ++ Y++ ++       ++   ++E   + A+  +    Y Q     S     +   +
Sbjct: 123 HSQSYSYMLDTICEPQERNDVLYQWKEDEHLLARNEFIGNLYNQFQDDKSPEALARVLVA 182

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 183 NYILEGVYFY 192


>gi|302379704|ref|ZP_07268189.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia
           magna ACS-171-V-Col3]
 gi|302312611|gb|EFK94607.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia
           magna ACS-171-V-Col3]
          Length = 347

 Score =  164 bits (415), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 86/188 (45%), Gaps = 8/188 (4%)

Query: 10  IQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           +      + +  +R++N  + ++N    +KY W  E Y  A NN W+P E+ +  D+  +
Sbjct: 9   LFNEHGDIELSKRRIINGNTTNLNDFNNIKYSWTSEWYRQAMNNFWIPEEINLNQDIKDY 68

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           ++   L++DE++   + L F    +SL    +   +  +++  E    L  QAF+E++HS
Sbjct: 69  RN---LSEDEKIAYDKILSFLIYLDSLQTAQLP-NLEAYITANEINLCLSIQAFQESIHS 124

Query: 129 HTFQYIITSLGLDEG--ELFNMYREVPSITAKANWA-LQYTQTLSSPSFHYWNKRRRSRI 185
            ++ YI+ ++   E   ++   +++   +  +  +   QY       S   + K   +  
Sbjct: 125 QSYSYILDTICSPEERTDILYQWKDDEFLLERNRFIGDQYNDFFEKKSERNFMKALIANY 184

Query: 186 LTRSLRFL 193
           +   + F 
Sbjct: 185 ILEGIYFY 192


>gi|288801822|ref|ZP_06407264.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           melaninogenica D18]
 gi|302344783|ref|YP_003813136.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           melaninogenica ATCC 25845]
 gi|288335864|gb|EFC74297.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           melaninogenica D18]
 gi|302149273|gb|ADK95535.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           melaninogenica ATCC 25845]
          Length = 348

 Score =  164 bits (415), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 81/197 (41%), Gaps = 8/197 (4%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEV 59
           M N    + +      + +  +RM+   + ++N    +KY W  + Y  A NN W+P E+
Sbjct: 1   MDNQLKRNTLFNPSGDIELRLRRMIGGNTTNLNDFNNMKYSWVSDWYRQAMNNFWIPEEI 60

Query: 60  PMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLR 119
            +  D   +K    L   ER    + L F    +SL +NN+   +  +++  E    L  
Sbjct: 61  NLSQD---FKDYPRLEKAERTAYDKILSFLVFLDSLQSNNLPT-LSEYITANEVNLCLHI 116

Query: 120 QAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQ-YTQTLSSPSFHY 176
           QAF+E +HS ++ Y++ ++   E   ++   ++    +  +  +    Y +         
Sbjct: 117 QAFQECIHSQSYSYMLDTICSPEERNDILYQWKTDEHLLNRNKFIGDCYNEFHEKRDKFS 176

Query: 177 WNKRRRSRILTRSLRFL 193
             K   +  +   + F 
Sbjct: 177 LMKTLIANFILEGIYFY 193


>gi|325268390|ref|ZP_08135022.1| ribonucleotide-diphosphate reductase beta subunit [Prevotella
           multiformis DSM 16608]
 gi|324989244|gb|EGC21195.1| ribonucleotide-diphosphate reductase beta subunit [Prevotella
           multiformis DSM 16608]
          Length = 348

 Score =  164 bits (415), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 81/197 (41%), Gaps = 8/197 (4%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEV 59
           M N    + +       ++  +RM+   + ++N    +KY W  + Y  A NN W+P E+
Sbjct: 1   MDNKLKRNTLFNPSGDTDLRLRRMIGGNTTNLNDFNNMKYSWVSDWYRQAMNNFWIPEEI 60

Query: 60  PMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLR 119
            +  D   +K    L   ER    + L F    +SL +NN+   +  +++  E    L  
Sbjct: 61  NLSQD---FKDYPRLDKAERTAYDKILSFLVFLDSLQSNNLPT-VSEYITANEVNLCLHI 116

Query: 120 QAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQ-YTQTLSSPSFHY 176
           QAF+E +HS ++ Y++ ++   E   ++   ++    +  +  +    Y +         
Sbjct: 117 QAFQECIHSQSYSYMLDTICSPEERNDILYQWKTDEHLLNRNKFIGDCYNEFHEKRDKFS 176

Query: 177 WNKRRRSRILTRSLRFL 193
             K   +  +   + F 
Sbjct: 177 LMKTLIANFILEGIYFY 193


>gi|327312835|ref|YP_004328272.1| ribonucleoside-diphosphate reductase subunit beta [Prevotella
           denticola F0289]
 gi|326946303|gb|AEA22188.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           denticola F0289]
          Length = 348

 Score =  163 bits (414), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 81/197 (41%), Gaps = 8/197 (4%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEV 59
           M N    + +       ++  +RM+   + ++N    +KY W  + Y  A NN W+P E+
Sbjct: 1   MDNKLKRNTLFNPSGDTDLRLRRMIGGNTTNLNDFNNMKYSWVSDWYRQAMNNFWIPEEI 60

Query: 60  PMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLR 119
            +  D   +K    L   ER    + L F    +SL +NN+   +  +++  E    L  
Sbjct: 61  NLSQD---FKDYPRLDKAERTAYDKILSFLVFLDSLQSNNLPT-VSEYITANEVNLCLHI 116

Query: 120 QAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQ-YTQTLSSPSFHY 176
           QAF+E +HS ++ Y++ ++   E   ++   ++    +  +  +    Y +         
Sbjct: 117 QAFQECIHSQSYSYMLDTICSPEERNDILYQWKTDEHLLNRNKFIGDCYNEFHEKRDKFS 176

Query: 177 WNKRRRSRILTRSLRFL 193
             K   +  +   + F 
Sbjct: 177 LMKTLIANFILEGIYFY 193


>gi|257067181|ref|YP_003153437.1| ribonucleotide-diphosphate reductase subunit beta [Anaerococcus
           prevotii DSM 20548]
 gi|256799061|gb|ACV29716.1| Ribonucleoside-diphosphate reductase [Anaerococcus prevotii DSM
           20548]
          Length = 352

 Score =  163 bits (414), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 84/188 (44%), Gaps = 8/188 (4%)

Query: 10  IQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           I   +  +++  +R++   + ++N    LKY W  + Y  A NN W+P E+ +  D+  +
Sbjct: 14  IFNEDGDIDLSKRRIIQGNTTNLNDFNNLKYTWTSDWYRQAMNNFWIPEEINLNQDIKDY 73

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           +    L   E+    R L F    +S+   N+   +  +++  E    L  Q ++E++HS
Sbjct: 74  RK---LDKHEKKAFDRILSFLTYLDSIQTANLP-NLQTYITANEINLCLSIQTYQESIHS 129

Query: 129 HTFQYIITSLGLDEG--ELFNMYREVPSITAKANWA-LQYTQTLSSPSFHYWNKRRRSRI 185
            ++ YI+ ++   E    +  +++E   +  +  +   QY + L +     + K   +  
Sbjct: 130 QSYSYILDTICSPEERTRILYLWKEDEHLLKRNEFIGDQYNEFLENDDEFRFMKVLIANY 189

Query: 186 LTRSLRFL 193
           +   + F 
Sbjct: 190 ILEGIYFY 197


>gi|257453171|ref|ZP_05618470.1| ribonucleoside-diphosphate reductase beta chain [Fusobacterium sp.
           3_1_5R]
 gi|317059706|ref|ZP_07924191.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 3_1_5R]
 gi|313685382|gb|EFS22217.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           sp. 3_1_5R]
          Length = 344

 Score =  163 bits (414), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 46/189 (24%), Positives = 88/189 (46%), Gaps = 8/189 (4%)

Query: 10  IQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           +   E   ++ ++R++    +++  L  +K+ WA + Y +   N W+P +V +  D   +
Sbjct: 6   LFNPEGNDSLLERRIIKGNSTNLFNLNNVKFTWATQLYRTMMANFWIPEKVDLTQDKNDY 65

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           ++   LT  ER      L F    +S+  NN+   I  +++ PE    L  Q F+EA+HS
Sbjct: 66  EN---LTVPEREAYDGILSFLIFLDSIQTNNVP-NISDYVTAPEVNLLLSIQTFQEAIHS 121

Query: 129 HTFQYIITSLGLDEGE--LFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRI 185
            ++QYII S+   E    +++ +R+   +  +  +  Q Y   +   S   + K   +  
Sbjct: 122 QSYQYIIESILPKESRDLIYDKWRDDKILFERNRFIAQIYQDFIEETSDRNFAKVLVANY 181

Query: 186 LTRSLRFLC 194
           L  SL F  
Sbjct: 182 LLESLYFYN 190


>gi|294463759|gb|ADE77404.1| unknown [Picea sitchensis]
          Length = 289

 Score =  163 bits (414), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 19/141 (13%)

Query: 57  TEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQY 116
            EV +  DL  W +   LT +E+  I   L FFA+S+ +V  N+     + +  PE R +
Sbjct: 2   EEVDLSQDLYQWVN---LTKNEKHFISHVLAFFAASDGIVLENLAGRFLKDVQIPEARAF 58

Query: 117 LLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPS 173
              Q   E +HS  +  ++ +   D  E   LFN    +P +  KA WA+++ Q+     
Sbjct: 59  YGFQIAIENIHSEMYSLLLETYIRDSKEKARLFNAINTIPCVARKAEWAMRWIQS----- 113

Query: 174 FHYWNKRRRSRILTRSLRFLC 194
                         R + F C
Sbjct: 114 --------SGSFAERIVSFAC 126


>gi|299144102|ref|ZP_07037182.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus
           sp. oral taxon 386 str. F0131]
 gi|298518587|gb|EFI42326.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus
           sp. oral taxon 386 str. F0131]
          Length = 346

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 82/191 (42%), Gaps = 8/191 (4%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
              +      V +  ++M+N  + ++N    +KY W  + Y +  NN W+P E+ M  D+
Sbjct: 5   RKALFNERGDVELTKRKMINGNTTNLNDFNNIKYTWVSDMYRTMMNNFWIPEEINMNQDI 64

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             +++   L   E+    + L F    +S+   N+   I  + +  E    L  QA++EA
Sbjct: 65  KDYRN---LDFHEKKAYDKILSFLIFLDSIQTANLP-NISDYTTANEVNLILTIQAYQEA 120

Query: 126 VHSHTFQYIITSLGLDEG--ELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           +HS ++ YI+ ++   E   E+   +R+   +  +  +    Y   + + +   + K   
Sbjct: 121 IHSQSYSYILDTIASPEERTEILYQWRDDEHLLNRNKFIGNIYNDFVENHTKETYMKTVM 180

Query: 183 SRILTRSLRFL 193
              +   + F 
Sbjct: 181 GNYILEGIYFY 191


>gi|296271635|ref|YP_003654266.1| ribonucleoside-diphosphate reductase [Arcobacter nitrofigilis DSM
           7299]
 gi|296095810|gb|ADG91760.1| Ribonucleoside-diphosphate reductase [Arcobacter nitrofigilis DSM
           7299]
          Length = 339

 Score =  163 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 5/191 (2%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
               I   + + ++ D+R+     D +     +KY WA   + +   N W P EV M  D
Sbjct: 2   ARKTIYNPDSKESLSDRRIFGGNPDGMINFTKMKYQWALNLWDTMEANTWFPREVQMTGD 61

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
              +K    LT  E+ M    L      +SL  NN++  I  +++ PE    L RQ++EE
Sbjct: 62  AKDYK---YLTPAEKRMYDLVLSQLIFMDSLQTNNLMDNINPYITVPEINACLSRQSYEE 118

Query: 125 AVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSP-SFHYWNKRRRS 183
           A HS ++  ++ S+  +  E+++M++    +  K N+       LS   +         +
Sbjct: 119 ANHSKSYAVMVESISDNTDEIYDMWKNDTQLREKNNYIAAVYDNLSDNITDEKMVLAMFA 178

Query: 184 RILTRSLRFLC 194
             +   L F  
Sbjct: 179 NQILEGLYFYA 189


>gi|325478871|gb|EGC81981.1| ribonucleoside-diphosphate reductase, beta subunit [Anaerococcus
           prevotii ACS-065-V-Col13]
          Length = 352

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 86/188 (45%), Gaps = 8/188 (4%)

Query: 10  IQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           I   +  +++  ++++   + ++N    LKY W  + Y  A NN W+P E+ +  D+  +
Sbjct: 14  IFNEDGDIDLAKRKIIQGNTTNLNDFNNLKYTWTSDWYRQAMNNFWIPEEINLNQDIKDY 73

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           ++   L + E+    R L F    +S+   N+   +  +++  E    L  Q ++E++HS
Sbjct: 74  RN---LDEHEKRAFDRILSFLTYLDSIQTANLP-NLQTYITANEINLCLSIQTYQESIHS 129

Query: 129 HTFQYIITSLGLDEG--ELFNMYREVPSITAKANWA-LQYTQTLSSPSFHYWNKRRRSRI 185
            ++ YI+ ++   E    +  +++E   +  +  +   QY + L +     + K   +  
Sbjct: 130 QSYSYILDTICSPEERTRILYLWKEDEHLLKRNEFIGEQYNEFLKNDDEFRFMKALVANY 189

Query: 186 LTRSLRFL 193
           +   + F 
Sbjct: 190 ILEGIYFY 197


>gi|90592764|ref|YP_529717.1| RR2B [Agrotis segetum nucleopolyhedrovirus]
 gi|71559214|gb|AAZ38213.1| RR2B [Agrotis segetum nucleopolyhedrovirus]
          Length = 313

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 43/165 (26%), Positives = 80/165 (48%), Gaps = 9/165 (5%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
              L P+++   W  Y  A +  W   EV +  D   + SK  L DDER  IK  L FFA
Sbjct: 5   RKVLFPIQHNDLWRAYKQALDCMWKVEEVDLSKDCDDFTSK--LNDDERYFIKHVLAFFA 62

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFN 147
           +++S+V  N++  + +++   E + +  +Q   E VH+  +  +I  L  DE E   L N
Sbjct: 63  AADSIVNINLIEYMQQNVPELEAQYFYNQQVLIECVHTEMYNLLIHQLISDEHERDTLLN 122

Query: 148 MYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
            +  +P +  K +WA+++  + ++     + +R  +  +   + F
Sbjct: 123 AFERMPCVRKKTDWAMKWINSSTA----TFAERMVAFAIVEGVFF 163


>gi|27769295|gb|AAH42468.1| Similar to ribonucleotide reductase M2 polypeptide [Homo sapiens]
          Length = 285

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 40/139 (28%), Positives = 62/139 (44%), Gaps = 10/139 (7%)

Query: 57  TEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQY 116
            EV +  DL  W   N L  DE+  I   L FFA+S+ +V  N+V    + +  PE R +
Sbjct: 1   EEVDLSKDLPHW---NKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCF 57

Query: 117 LLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPS 173
              Q   E VHS  +  +I +   D  +   LFN    +P +  KA+WAL++     S  
Sbjct: 58  YGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKS-- 115

Query: 174 FHYWNKRRRSRILTRSLRF 192
              + +R  +      + F
Sbjct: 116 --TFGERVVAFAAVEGVFF 132


>gi|323343338|ref|ZP_08083565.1| ribonucleotide-diphosphate reductase beta subunit [Prevotella
           oralis ATCC 33269]
 gi|323095157|gb|EFZ37731.1| ribonucleotide-diphosphate reductase beta subunit [Prevotella
           oralis ATCC 33269]
          Length = 349

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 81/195 (41%), Gaps = 8/195 (4%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           N    + +   E   ++  +RM+   + ++N    ++Y WA + Y  A NN W+P E+ +
Sbjct: 4   NELKRNALFNPEGDTDLRLRRMIGGNTTNLNDFNNMRYPWASDWYRQAMNNFWIPEEINL 63

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D   +     L   ER    + L F    +SL +NN+   I  +++  E    L  QA
Sbjct: 64  AQDTKDY---PRLDKAERAAYDKILSFLVFLDSLQSNNLPT-ISEYITANEVNLCLHIQA 119

Query: 122 FEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWN 178
           F+E VHS ++ Y++ ++   E   ++   ++    +  +  +    Y +           
Sbjct: 120 FQECVHSQSYSYMLDTICSPEERNDILYQWKTDEHLLRRNTFIGDCYNEFHDKRDKFSLM 179

Query: 179 KRRRSRILTRSLRFL 193
           K   +  +   + F 
Sbjct: 180 KTCVANFILEGIYFY 194


>gi|313900116|ref|ZP_07833616.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp.
           HGF2]
 gi|312955168|gb|EFR36836.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp.
           HGF2]
          Length = 347

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 83/194 (42%), Gaps = 8/194 (4%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           +    P+        V  +RM+N  + ++N    +KY W  + Y  A NN W+P E+ + 
Sbjct: 3   DLVRKPLFNEHGDCEVGKRRMINGNTTNLNDFNNMKYTWVSDWYRQAMNNFWIPEEINLN 62

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D+  ++    L + E+    + L F    +S+   N+   +  +++  E    L  QAF
Sbjct: 63  QDVKDYR---RLREAEKTAYDKTLSFLIFLDSIQTANLP-NVGEYITANEVNLCLTIQAF 118

Query: 123 EEAVHSHTFQYIITSLGLDEG--ELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNK 179
           +EAVHS ++ Y++ S+   +   ++   +++   +  +  +    Y    +     +  K
Sbjct: 119 QEAVHSQSYSYMLDSICSPQERTDILYQWKDDERLLNRNKFIGDLYNDFQTHRDGRHLMK 178

Query: 180 RRRSRILTRSLRFL 193
              +  +   + F 
Sbjct: 179 TMMANYILEGIYFY 192


>gi|303234233|ref|ZP_07320879.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia
           magna BVS033A4]
 gi|302494774|gb|EFL54534.1| ribonucleoside-diphosphate reductase, beta subunit [Finegoldia
           magna BVS033A4]
          Length = 347

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 86/188 (45%), Gaps = 8/188 (4%)

Query: 10  IQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           +      + +  ++++N  + ++N    +KY W  E Y  A NN W+P E+ +  D+  +
Sbjct: 9   LFNEHGDIELSKRKIINGNTTNLNDFNNIKYSWTSEWYRQAMNNFWIPEEINLNQDIKDY 68

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           ++   L++DE++   + L F    +SL    +   +  +++  E    L  QAF+E++HS
Sbjct: 69  RN---LSEDEKIAYDKILSFLIYLDSLQTAQLP-NLEAYITANEINLCLSIQAFQESIHS 124

Query: 129 HTFQYIITSLGLDEG--ELFNMYREVPSITAKANWA-LQYTQTLSSPSFHYWNKRRRSRI 185
            ++ YI+ ++   E   ++   +++   +  +  +   QY       S   + K   +  
Sbjct: 125 QSYSYILDTICSPEERTDILYQWKDDEFLLERNRFIGDQYNDFFEKKSERNFMKALIANY 184

Query: 186 LTRSLRFL 193
           +   + F 
Sbjct: 185 ILEGIYFY 192


>gi|50237508|gb|AAT71841.1| ribonucleotide reductase small chain [Rock bream iridovirus]
          Length = 312

 Score =  163 bits (413), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 47/168 (27%), Positives = 71/168 (42%), Gaps = 18/168 (10%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           D   L P      W  Y  A  + W   EV +  D+  W  K  LT+ ER  +   L FF
Sbjct: 2   DRYVLRP-NDPHLWAMYKKAVASFWTVEEVDLSTDVRHWTDK--LTEAERRFMSHILAFF 58

Query: 90  ASSESLVANNIVLAIYRHLS-NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE--LF 146
           A ++ +V +N+V    + L   PE R +   Q   + +H+  +  +I +L   E +  LF
Sbjct: 59  AMADGIVGDNLVCNFAKELDHIPEARAFYGFQVAMKNIHAEMYTQLIITLVAKENQAALF 118

Query: 147 NMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           +   ++P + AKA WA Q+      P            I TR L F  
Sbjct: 119 SAAEDMPCVKAKAQWAAQWLNATHKP------------IATRLLAFAA 154


>gi|303237757|ref|ZP_07324316.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           disiens FB035-09AN]
 gi|302482043|gb|EFL45079.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           disiens FB035-09AN]
          Length = 349

 Score =  163 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 80/195 (41%), Gaps = 8/195 (4%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           +    + +   +   ++  +RM+   + ++N    +KY W  + Y  A NN W+P E+ +
Sbjct: 4   DKLQRNALFNPQGDTDLRLRRMIGGNTTNLNDFNNMKYVWVSDWYRQAMNNFWIPEEINL 63

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D+  +     L   ER    + L F    +SL +NN+   I  +++  E    L  Q 
Sbjct: 64  AQDIKDY---PNLPQAERTAYDKILSFLVFLDSLQSNNLPT-ISEYITANEVNLCLHIQT 119

Query: 122 FEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWN 178
           F+E +HS ++ Y++ ++   E   ++   ++    +  +  +    Y +           
Sbjct: 120 FQECIHSQSYSYMLDTICSPEERNDILYQWKTDEHLLKRNTFIGDCYNEFQEKRDKFALM 179

Query: 179 KRRRSRILTRSLRFL 193
           K   +  +   + F 
Sbjct: 180 KACMANFILEGIYFY 194


>gi|331083185|ref|ZP_08332301.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 6_1_63FAA]
 gi|330404574|gb|EGG84114.1| ribonucleoside-diphosphate reductase subunit beta [Lachnospiraceae
           bacterium 6_1_63FAA]
          Length = 347

 Score =  163 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 78/190 (41%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
            P+       +V  +RM+   + ++N    ++YGW  + Y  A NN W+P E+ +  D  
Sbjct: 7   KPLFNPSGDTDVRFRRMIGGNTTNLNDFNNMRYGWVKDWYRQAMNNFWIPEEINLSQDRK 66

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +     L   ER    + L F    +S+ + N+   I  +++  E    L  Q F+E V
Sbjct: 67  DY---GELLGKERQAYDKILSFLVFLDSIQSANLPC-IGEYITANEINLCLSIQTFQECV 122

Query: 127 HSHTFQYIITSLGLDEG--ELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRS 183
           HS ++ Y++ ++   E   E+   ++    +  +  +  + Y +           K   +
Sbjct: 123 HSQSYSYMLDTICSPEKRNEILYQWKTDERLLKRNTFIGELYNEFQMKKDSFTLLKVMMA 182

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 183 NYILEGIYFY 192


>gi|306819883|ref|ZP_07453537.1| ribonucleotide-diphosphate reductase beta subunit [Eubacterium
           yurii subsp. margaretiae ATCC 43715]
 gi|304552130|gb|EFM40067.1| ribonucleotide-diphosphate reductase beta subunit [Eubacterium
           yurii subsp. margaretiae ATCC 43715]
          Length = 347

 Score =  163 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 84/191 (43%), Gaps = 8/191 (4%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
              +      + ++ ++M+N  + ++N    +KY W  + Y  A NN W+P E+ +  D+
Sbjct: 6   RKQLFNENGDIELNKRKMINGNTTNLNDFNNMKYTWVSDWYRQAMNNFWIPEEINLTQDI 65

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             ++    L+ +E+    + L F    +S+   N+   I  +++  E    L  QA++EA
Sbjct: 66  KDYRK---LSKEEKNAYDKILSFLVFLDSIQTANLP-NIGEYITANEVNLCLTIQAYQEA 121

Query: 126 VHSHTFQYIITSLGLDEGE--LFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           +HS ++ YI+ ++   E    +   +++   + A+  +    Y +     S     K   
Sbjct: 122 IHSQSYGYILDTICSPEERTNILYQWKDDELLLARNKFIGDLYNEFYYDRSDFNLVKTAV 181

Query: 183 SRILTRSLRFL 193
           +  +   + F 
Sbjct: 182 ANYILEGIYFY 192


>gi|258511567|ref|YP_003185001.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257478293|gb|ACV58612.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 369

 Score =  163 bits (412), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 44/193 (22%), Positives = 93/193 (48%), Gaps = 8/193 (4%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           A     + +   E   +   +R++   + ++ +L  +KY WA++ Y +  NN W+P E+P
Sbjct: 24  AMQLKRTRLFNAEGDRDWGKRRIIGGNTTNMIELNNIKYEWAYKLYRAMMNNFWIPEEIP 83

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           + DD   +   + L+DDER    + L F    +SL+ +N+   I  +++ PE    L   
Sbjct: 84  LADDARQY---DLLSDDERRSYNKVLSFLIFMDSLLTHNLP-NINEYITAPEVNLCLTVH 139

Query: 121 AFEEAVHSHTFQYIITSLGLD--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYW 177
           AF+EAVHS ++ Y++ S+       +++N +R    +  +  +    + + + +P+    
Sbjct: 140 AFQEAVHSQSYGYVLDSVVNPATRDQIYNEWRNDDHLLRRNQFITDLFEEFIENPTDRNL 199

Query: 178 NKRRRSRILTRSL 190
            K   +  +   +
Sbjct: 200 MKTIVANYILEGV 212


>gi|237738278|ref|ZP_04568759.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           mortiferum ATCC 9817]
 gi|229420158|gb|EEO35205.1| ribonucleoside-diphosphate reductase subunit beta [Fusobacterium
           mortiferum ATCC 9817]
          Length = 348

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 45/192 (23%), Positives = 89/192 (46%), Gaps = 8/192 (4%)

Query: 7   LSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
              +       ++++++++    +++  L  +KYGWA   Y +   N W+P ++ +  D 
Sbjct: 7   RKKLFNPSGIDSLNERKIIKGNSTNIFNLNNVKYGWANHLYRTMMGNFWIPEKIDLTQDR 66

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             +   N LT+ E+      L F    +S+  NNI   I  +++ PE    L  Q F+EA
Sbjct: 67  VDY---NNLTNYEKEAYDGILSFLIFLDSIQTNNIP-NISDYITAPEINLILSIQTFQEA 122

Query: 126 VHSHTFQYIITSLGLDEGE--LFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           +HS ++QYII S+   E    +++ +RE   +  +  +  + Y   L +P    + +   
Sbjct: 123 IHSQSYQYIIESILPKETRNYIYDKWREDKILFERNRYIAEIYQNFLDNPDDKNFARVIV 182

Query: 183 SRILTRSLRFLC 194
           +  L  S+ F  
Sbjct: 183 ADYLLESIYFYN 194


>gi|292658982|gb|ADE34370.1| ribonucleotide reductase small chain [Turbot reddish body
           iridovirus]
          Length = 312

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 47/168 (27%), Positives = 71/168 (42%), Gaps = 18/168 (10%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           D   L P      W  Y  A  + W   EV +  D+  W  K  LT+ ER  +   L FF
Sbjct: 2   DRYVLRP-NDPHLWAMYKKAVASFWTVEEVDLSTDVRHWTDK--LTEAERRFMSHILAFF 58

Query: 90  ASSESLVANNIVLAIYRHLS-NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE--LF 146
           A ++ +V +N+V    + L   PE R +   +   E +H+  +  +I +L   E +  LF
Sbjct: 59  AMADGIVGDNLVCNFAKELDHIPEARAFYGFRVAMENIHAEMYTQLIITLVAKENQAALF 118

Query: 147 NMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           +   ++P + AKA WA Q+      P            I TR L F  
Sbjct: 119 SAAEDMPCVKAKAQWAAQWLNATHKP------------IATRLLAFAA 154


>gi|227485717|ref|ZP_03916033.1| ribonucleoside-diphosphate reductase [Anaerococcus lactolyticus
           ATCC 51172]
 gi|227236272|gb|EEI86287.1| ribonucleoside-diphosphate reductase [Anaerococcus lactolyticus
           ATCC 51172]
          Length = 352

 Score =  162 bits (411), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 83/188 (44%), Gaps = 8/188 (4%)

Query: 10  IQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           I      +++  ++++   + ++N    LKY W  + Y  A NN W+P E+ +  D+  +
Sbjct: 14  IFNENGDIDLAKRKIIQGNTTNLNDFNNLKYTWTSDWYRQAMNNFWIPEEINLNQDIKDY 73

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           +    L   E+    R L F    +S+   N+   +  +++  E    L  Q ++E++HS
Sbjct: 74  RK---LDQHEKRAFDRILSFLTYLDSIQTANLP-NLQTYVTANEINLCLSIQTYQESIHS 129

Query: 129 HTFQYIITSLGLDEG--ELFNMYREVPSITAKANWA-LQYTQTLSSPSFHYWNKRRRSRI 185
            ++ YI+ ++   E    +  +++E   +  +  +   QY + L   +   + +   +  
Sbjct: 130 QSYSYILDTICSPEERTRILYLWKEDDHLLRRNEFIGEQYNEFLVDDNEFKFVRALIANY 189

Query: 186 LTRSLRFL 193
           +   + F 
Sbjct: 190 ILEGIYFY 197


>gi|309775830|ref|ZP_07670824.1| ribonucleoside-diphosphate reductase, beta subunit
           [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916368|gb|EFP62114.1| ribonucleoside-diphosphate reductase, beta subunit
           [Erysipelotrichaceae bacterium 3_1_53]
          Length = 347

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 81/194 (41%), Gaps = 8/194 (4%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           +    P+        V  +RM+N  + ++N    +KY W  + Y  A NN W+P E+ + 
Sbjct: 3   DLLRKPLFNEHGDCEVGKRRMINGNTTNLNDFNNMKYTWVSDWYRQAMNNFWIPEEINLN 62

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D+  ++    L + E+    + L F    +S+   N+   +  +++  E    L  QAF
Sbjct: 63  QDVKDYR---RLHEAEKTAYDKTLSFLIFLDSIQTANLP-NVGEYVTANEVNLCLTIQAF 118

Query: 123 EEAVHSHTFQYIITSLGLD--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNK 179
           +EAVHS ++ Y++ S+       ++   +++   +  +  +    Y          +  K
Sbjct: 119 QEAVHSQSYSYMLDSICSPQERNDILYQWKDDERLLNRNKFIGDLYNDFQEHKDGLHLMK 178

Query: 180 RRRSRILTRSLRFL 193
              +  +   + F 
Sbjct: 179 TMMANYILEGIYFY 192


>gi|227501022|ref|ZP_03931071.1| ribonucleoside-diphosphate reductase [Anaerococcus tetradius ATCC
           35098]
 gi|227216795|gb|EEI82193.1| ribonucleoside-diphosphate reductase [Anaerococcus tetradius ATCC
           35098]
          Length = 352

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 84/188 (44%), Gaps = 8/188 (4%)

Query: 10  IQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           I   +  +++  ++++   + ++N    LKY W  + Y  A NN W+P E+ +  D+  +
Sbjct: 14  IFNEDGDIDLGKRKIIQGNTTNLNDFNNLKYTWTSDWYRQAMNNFWIPEEINLNQDIKDY 73

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           +    L   E+    R L F    +S+   N+   +  +++  E    L  Q ++E++HS
Sbjct: 74  RK---LDQYEKKAYDRILSFLTYLDSIQTANLP-NLQTYITANEINLCLSIQTYQESIHS 129

Query: 129 HTFQYIITSLGLDEG--ELFNMYREVPSITAKANWA-LQYTQTLSSPSFHYWNKRRRSRI 185
            ++ YI+ ++   E    +  +++E   +  +  +   QY + L +     + K   +  
Sbjct: 130 QSYSYILDTICSPEERTRILYLWKEDEHLLKRNEFIGEQYNEFLENDDEFRFMKVLVANY 189

Query: 186 LTRSLRFL 193
           +   + F 
Sbjct: 190 ILEGIYFY 197


>gi|60682187|ref|YP_212331.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           fragilis NCTC 9343]
 gi|60493621|emb|CAH08410.1| putative ribonucleoside-diphosphate reductase beta chain
           [Bacteroides fragilis NCTC 9343]
          Length = 349

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 79/190 (41%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           + +   E       ++M+   + ++N    ++Y W  + Y  A NN W+P E+ +  D  
Sbjct: 9   NALFNPEGDTETRFRKMIGGNTTNLNDFNNMRYQWVSDWYRQAMNNFWIPEEINLTQDTK 68

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +     LT  ER    + L F    +SL +NN+   +  +++  E    L  QAF+E V
Sbjct: 69  DY---PHLTPAERTAYDKILSFLVFLDSLQSNNLPT-LSEYITANEVNLCLHIQAFQECV 124

Query: 127 HSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA-LQYTQTLSSPSFHYWNKRRRS 183
           HS ++ Y++ S+   E   ++   ++    +  +  +    Y +   +       K   +
Sbjct: 125 HSQSYSYMLDSICSPEERNDILYQWKTDEHLLRRNTFIGNCYNEFQENRDGFALMKTLIA 184

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 185 NYILEGIYFY 194


>gi|254442775|ref|ZP_05056251.1| ribonucleoside-diphosphate reductase, beta subunit
           [Verrucomicrobiae bacterium DG1235]
 gi|198257083|gb|EDY81391.1| ribonucleoside-diphosphate reductase, beta subunit
           [Verrucomicrobiae bacterium DG1235]
          Length = 361

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 52/172 (30%), Positives = 92/172 (53%), Gaps = 2/172 (1%)

Query: 22  KRMLNARSDV-NQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           K+++N R  +   LLPLKY WA+E Y +   NHW P ++ M  D+  WK    +++ ER 
Sbjct: 26  KKIINGRETMTFNLLPLKYNWAYEIYKTMKANHWEPEDIGMNKDIEQWKDTEQVSEIERW 85

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
           +I   +G+F+++E +V +NI+  I   ++ PE +  L R A EE VH+ +  Y+I+SLG+
Sbjct: 86  IIMMGIGYFSAAEGIVGDNILHVIRELVTAPELKLVLGRHAHEENVHADSLLYMISSLGI 145

Query: 141 DEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           +  E   M+ ++P+I  K  +  + +  L +          + +       F
Sbjct: 146 NPHECEAMFEDIPTIVKKNEFVTRQSHALRNDVDLT-ITENKQKFAKNVFLF 196


>gi|325261084|ref|ZP_08127822.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp.
           D5]
 gi|324032538|gb|EGB93815.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium sp.
           D5]
          Length = 347

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 78/190 (41%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
            P+   E  + V  ++M+   + ++N    +KY W  + Y  A NN W+P E+ +  D+ 
Sbjct: 7   KPLFNPEGDIEVTKRKMIGGNTTNLNDFNHMKYNWVSDWYRQAMNNFWVPEEINLSVDIK 66

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +K    L   ER    + L F    +S+   N+   I  +++  E    L  Q F+EAV
Sbjct: 67  DYK---MLPAAERRAYDKILSFLIFLDSIQTANLP-NIGEYITANEVNLCLSIQTFQEAV 122

Query: 127 HSHTFQYIITSLGLDEGE--LFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRS 183
           HS ++ Y++ ++   +    +   ++E   +  +  +    Y       S         +
Sbjct: 123 HSQSYSYMLDTICEPQERNAVLYQWKEDRHLLERNEFIGNLYNAFQEEKSPEMLACTLIA 182

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 183 NYILEGIYFY 192


>gi|209170936|ref|YP_002268082.1| agip52 [Agrotis ipsilon multiple nucleopolyhedrovirus]
 gi|208436527|gb|ACI28754.1| ribonucleotide reductase-2B [Agrotis ipsilon multiple
           nucleopolyhedrovirus]
          Length = 313

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 9/165 (5%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
              L P+ +   W  Y  A +  W   EV M  D   ++SK  L DDER  IK  L FFA
Sbjct: 5   RKVLKPILHDDLWAAYKQAFDCMWKVEEVDMSRDYDDFESK--LNDDERYFIKHVLAFFA 62

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFN 147
           +++S+V  N++  + R++   E + +   Q   E VH+  +  +I  L  DE E   L N
Sbjct: 63  AADSIVNINLIEYMQRNVPELEAQYFYNLQVLIECVHTEMYNLLIEQLIKDEHERDTLLN 122

Query: 148 MYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
            +  VP +  KA WA+++ ++ ++       +R  +  +   + F
Sbjct: 123 AFEHVPCVRKKAQWAMKWIESDTA----TLAERMVAFAIVEGVFF 163


>gi|154505112|ref|ZP_02041850.1| hypothetical protein RUMGNA_02625 [Ruminococcus gnavus ATCC 29149]
 gi|153794591|gb|EDN77011.1| hypothetical protein RUMGNA_02625 [Ruminococcus gnavus ATCC 29149]
          Length = 347

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 77/190 (40%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
            P+       ++  +RM+   + ++N    L+Y W    Y  A NN W+P E+ +  D+ 
Sbjct: 7   KPLFNPGGDTDIRLRRMIGGNTTNLNDFNNLRYTWVNNWYRQAMNNFWIPEEINLSQDIK 66

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +     LT++ER    + L F    +S+   N+   I  +++  E    L  Q F+E V
Sbjct: 67  DY---PNLTENERTAYNKILSFLVFLDSIQTANLPC-IGEYITANEINLCLSIQTFQECV 122

Query: 127 HSHTFQYIITSLGLD--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRS 183
           HS ++ Y++ S+       ++   ++    +  +  +    Y +           K   +
Sbjct: 123 HSQSYSYMLDSICSPVERNDILYQWKNDAHLLRRNTFIGDLYNEFQEKKDDFTLLKVMMA 182

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 183 NYILEGIYFY 192


>gi|218289144|ref|ZP_03493380.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218240727|gb|EED07906.1| Ribonucleoside-diphosphate reductase [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 345

 Score =  162 bits (410), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 43/185 (23%), Positives = 91/185 (49%), Gaps = 8/185 (4%)

Query: 10  IQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           +   E   +   +R++   + ++ +L  +KY WA++ Y +  NN W+P E+P+ DD   +
Sbjct: 8   LFNAEGDRDWGKRRIIGGNTTNMIELNNIKYEWAYKLYRAMMNNFWIPEEIPLADDARQY 67

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
              + L+DDER    + L F    +SL+ +N+   I  +++ PE    L   AF+EAVHS
Sbjct: 68  ---DLLSDDERRSYNKVLSFLIFMDSLLTHNLP-NINEYITAPEVNLCLTVHAFQEAVHS 123

Query: 129 HTFQYIITSLGLD--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRI 185
            ++ Y++ S+       +++N +R    +  +  +    + + + +P+     K   +  
Sbjct: 124 QSYGYVLDSVVNPATRDQIYNEWRNDDHLLRRNQFITDLFEEFIENPTDRNLMKTIVANY 183

Query: 186 LTRSL 190
           +   +
Sbjct: 184 ILEGV 188


>gi|289177076|ref|NP_001165949.1| ribonucleoside-diphosphate reductase subunit M2 B isoform 3 [Homo
           sapiens]
 gi|55631160|ref|XP_528204.1| PREDICTED: ribonucleotide reductase M2 B (TP53 inducible) isoform 3
           [Pan troglodytes]
 gi|42794058|dbj|BAD11774.1| p53-inducible ribonucleotide reductase small subunit 2 long form
           [Homo sapiens]
 gi|119612246|gb|EAW91840.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_a [Homo
           sapiens]
          Length = 299

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 40/138 (28%), Positives = 62/138 (44%), Gaps = 10/138 (7%)

Query: 58  EVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYL 117
           EV +  DL  W   N L  DE+  I   L FFA+S+ +V  N+V    + +  PE R + 
Sbjct: 16  EVDLSKDLPHW---NKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFY 72

Query: 118 LRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSF 174
             Q   E VHS  +  +I +   D  +   LFN    +P +  KA+WAL++     S   
Sbjct: 73  GFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKS--- 129

Query: 175 HYWNKRRRSRILTRSLRF 192
             + +R  +      + F
Sbjct: 130 -TFGERVVAFAAVEGVFF 146


>gi|253567022|ref|ZP_04844473.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp.
           3_2_5]
 gi|265764336|ref|ZP_06092904.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp.
           2_1_16]
 gi|15290503|gb|AAK92210.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides
           fragilis 638R]
 gi|251944146|gb|EES84655.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides sp.
           3_2_5]
 gi|263256944|gb|EEZ28290.1| ribonucleoside-diphosphate reductase, beta subunit [Bacteroides sp.
           2_1_16]
 gi|301163665|emb|CBW23219.1| putative ribonucleoside-diphosphate reductase beta chain
           [Bacteroides fragilis 638R]
          Length = 349

 Score =  161 bits (409), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 79/190 (41%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           + +   E       ++M+   + ++N    ++Y W  + Y  A NN W+P E+ +  D  
Sbjct: 9   NALFNPEGDTETRLRKMIGGNTTNLNDFNNMRYKWVSDWYRQAMNNFWIPEEINLTQDTK 68

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +     LT  ER    + L F    +SL +NN+   +  +++  E    L  QAF+E V
Sbjct: 69  DY---PHLTPAERTAYDKILSFLVFLDSLQSNNLPT-LSEYITANEVNLCLHIQAFQECV 124

Query: 127 HSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA-LQYTQTLSSPSFHYWNKRRRS 183
           HS ++ Y++ S+   E   ++   ++    +  +  +    Y +   +       K   +
Sbjct: 125 HSQSYSYMLDSICSPEERNDILYQWKTDEHLLRRNTFIGNCYNEFQENRDGFALMKTLIA 184

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 185 NYILEGIYFY 194


>gi|325294459|ref|YP_004280973.1| ribonucleotide reductase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325064907|gb|ADY72914.1| ribonucleotide reductase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 352

 Score =  161 bits (409), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 44/190 (23%), Positives = 80/190 (42%), Gaps = 8/190 (4%)

Query: 9   PIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           PI       +   + +L   + ++  L  +KY WA + Y     N W+P  V +  D+  
Sbjct: 13  PIFNPNGNDDPTKRGILYGNTTNIFNLNDVKYEWATKLYRVMMANFWIPETVDLTQDVLD 72

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           +K    LT+DER      L F    +S+   NI   I  ++  PE    L   A++EA+H
Sbjct: 73  YKE---LTEDERQAYDEILSFLVFLDSIQTTNIP-NIAAYVKAPEITIDLSIHAYQEAIH 128

Query: 128 SHTFQYIITSLGLDEGE--LFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSR 184
           S ++ Y I S+   +    ++  +++ P +  +  +    Y + L  P+   + +     
Sbjct: 129 SQSYGYTIESVIPPQHRETVYYWWKKDPILFERNKYIADIYQKFLEEPTMENYGEVLVGN 188

Query: 185 ILTRSLRFLC 194
            L   L F  
Sbjct: 189 YLLEGLYFYN 198


>gi|255008714|ref|ZP_05280840.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           fragilis 3_1_12]
 gi|313146449|ref|ZP_07808642.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           fragilis 3_1_12]
 gi|313135216|gb|EFR52576.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           fragilis 3_1_12]
          Length = 349

 Score =  161 bits (408), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 78/190 (41%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           + +   E    +  ++M+   + ++N    + Y W  + Y  A NN W+P E+ +  D  
Sbjct: 9   NALFNPEGDTELRLRKMIGGNTTNLNDFNNMHYKWVSDWYRQAMNNFWIPEEINLTQDTK 68

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +     L   ER    + L F    +SL +NN+   I  +++  E    L  QAF+E V
Sbjct: 69  DY---PHLDKAERTAYDKILSFLVFLDSLQSNNLPT-ISEYITANEVNLCLHIQAFQECV 124

Query: 127 HSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA-LQYTQTLSSPSFHYWNKRRRS 183
           HS ++ Y++ S+   E   ++   ++    +  +  +    Y +   S       K   +
Sbjct: 125 HSQSYSYMLDSICSPEERNDILYQWKTDEHLLKRNTFIGNCYNEFQESQDSFTLMKTLIA 184

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 185 NYILEGIYFY 194


>gi|307565004|ref|ZP_07627521.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           amnii CRIS 21A-A]
 gi|307346317|gb|EFN91637.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           amnii CRIS 21A-A]
          Length = 347

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 81/194 (41%), Gaps = 8/194 (4%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
               + +   +   ++  +RM+    +++N    ++Y W  + Y  A NN W+P E+ + 
Sbjct: 3   KLQRNALFNPQGDTDLRLRRMIGGNSTNLNDFNNMRYSWVSDWYRQAMNNFWIPEEINLA 62

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D+  +     L   ER    + L F    +SL +NN+   I  +++  E    L  Q F
Sbjct: 63  QDIKDY---PNLPAAERKAYDKILSFLVFLDSLQSNNLPT-ISEYITANEVNLCLHIQTF 118

Query: 123 EEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNK 179
           +E VHS ++ Y++ ++   E   ++   ++    +  +  +    Y +  ++       K
Sbjct: 119 QECVHSQSYSYMLDTICSPEERNDILYQWKTDEHLLRRNTFIGDCYNEFQANRDKFCLMK 178

Query: 180 RRRSRILTRSLRFL 193
              +  +   + F 
Sbjct: 179 ACVANFILEGIYFY 192


>gi|53713986|ref|YP_099978.1| ribonucleotide-diphosphate reductase subunit beta [Bacteroides
           fragilis YCH46]
 gi|52216851|dbj|BAD49444.1| ribonucleoside-diphosphate reductase subunit B [Bacteroides
           fragilis YCH46]
          Length = 349

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 78/190 (41%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           + +   E       ++M+   + ++N    ++Y W  + Y    NN W+P E+ +  D  
Sbjct: 9   NALFNPEGDTETRLRKMIGGNTTNLNDFNNMRYKWVSDWYRQGMNNFWIPEEINLTQDTK 68

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +     LT  ER    + L F    +SL +NN+   +  +++  E    L  QAF+E V
Sbjct: 69  DY---PHLTPAERTAYDKILSFLVFLDSLQSNNLPT-LSEYITANEVNLCLHIQAFQECV 124

Query: 127 HSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA-LQYTQTLSSPSFHYWNKRRRS 183
           HS ++ Y++ S+   E   ++   ++    +  +  +    Y +   +       K   +
Sbjct: 125 HSQSYSYMLDSICSPEERNDILYQWKTDEHLLRRNTFIGNCYNEFQENRDGFALMKTLIA 184

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 185 NYILEGIYFY 194


>gi|296227442|ref|XP_002759378.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
           isoform 2 [Callithrix jacchus]
          Length = 299

 Score =  161 bits (408), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 40/138 (28%), Positives = 62/138 (44%), Gaps = 10/138 (7%)

Query: 58  EVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYL 117
           EV +  DL  W   N L  DE+  I   L FFA+S+ +V  N+V    + +  PE R + 
Sbjct: 16  EVDLSKDLPHW---NKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFY 72

Query: 118 LRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSF 174
             Q   E VHS  +  +I +   D  +   LFN    +P +  KA+WAL++     S   
Sbjct: 73  GFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKS--- 129

Query: 175 HYWNKRRRSRILTRSLRF 192
             + +R  +      + F
Sbjct: 130 -TFGERVVAFAAVEGVFF 146


>gi|260589755|ref|ZP_05855668.1| ribonucleoside-diphosphate reductase, beta subunit [Blautia
           hansenii DSM 20583]
 gi|260539995|gb|EEX20564.1| ribonucleoside-diphosphate reductase, beta subunit [Blautia
           hansenii DSM 20583]
          Length = 359

 Score =  161 bits (407), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 77/190 (40%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
            P+       +V  +RM+   + ++N    ++YGW    Y  A NN W+P E+ +  D  
Sbjct: 19  KPLFNPSGDTDVRFRRMIGGNTTNLNDFNNMRYGWVKGWYRQAMNNFWIPEEINLSQDRK 78

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +     L   ER    + L F    +S+ + N+   I  +++  E    L  Q F+E V
Sbjct: 79  DY---GELLGKERQAYDKILSFLVFLDSIQSANLPC-IGEYITANEINLCLSIQTFQECV 134

Query: 127 HSHTFQYIITSLGLDEG--ELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRS 183
           HS ++ Y++ ++   E   E+   ++    +  +  +  + Y +           K   +
Sbjct: 135 HSQSYSYMLDTICSPEKRNEILYQWKTDERLLKRNTFIGELYNEFQMKKDSFTLLKVMMA 194

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 195 NYILEGIYFY 204


>gi|19881429|ref|NP_612246.1| putative ribonucleotide reductase small subunit [Infectious spleen
           and kidney necrosis virus]
 gi|19773634|gb|AAL98748.1|AF371960_24 putative ribonucleotide reductase small subunit [infectious spleen
           and kidney necrosis virus]
          Length = 312

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 47/168 (27%), Positives = 70/168 (41%), Gaps = 18/168 (10%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           D   L P      W  Y  A  + W   EV +  D+  W  K  LT+ ER  +   L FF
Sbjct: 2   DKYVLRPSD-PHLWAMYKKAVASFWTVEEVDLSTDVRHWTEK--LTEAERRFMSHILAFF 58

Query: 90  ASSESLVANNIVLAIYRHLS-NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE--LF 146
           A ++ +V +N+V    + L   PE R +   Q   E +H+  +  +I +L   E +  LF
Sbjct: 59  AMADGIVGDNLVCNFAKELDYIPEARAFYGFQVAMENIHAEMYTQLIITLVAKENQAALF 118

Query: 147 NMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           +   ++P + AKA WA Q+                   I TR L F  
Sbjct: 119 SAAEDMPCVKAKAQWAAQWLNA------------THKSIATRLLAFAA 154


>gi|228861726|ref|YP_002854746.1| Rr2 [Euproctis pseudoconspersa nucleopolyhedrovirus]
 gi|226425174|gb|ACO53586.1| Rr2 [Euproctis pseudoconspersa nucleopolyhedrovirus]
          Length = 339

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 51/176 (28%), Positives = 89/176 (50%), Gaps = 15/176 (8%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
              +LP+++   W+ Y +A +  W   EV +  D   W++K  L +DER  +K  L FFA
Sbjct: 7   RKVILPIQHANLWKAYKTALDCVWKVEEVDLTKDWEDWQNK--LNEDERHFLKHILAFFA 64

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFN 147
           S++S+V  N++  +   ++  E R +  +Q F E VHS  +  +I     DE E   L N
Sbjct: 65  SADSIVNINLIDYVRGKVAELEARYFYDQQIFIENVHSEMYSLLIFEYIKDEQEKDTLLN 124

Query: 148 MYREVPSITAKANWALQYTQT------LSSPSFHYWN----KRRRSRILTRSLRFL 193
            + ++  +  KA WAL++T++      L +P+  + N    K+  S +  R + F 
Sbjct: 125 AFNDIECVRKKAQWALKWTESAWWQDWLVNPATRWCNRLMGKQTPSELAVRMVAFA 180


>gi|282860353|ref|ZP_06269421.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           bivia JCVIHMP010]
 gi|282586851|gb|EFB92088.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           bivia JCVIHMP010]
          Length = 347

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 81/195 (41%), Gaps = 8/195 (4%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
                + +   +   ++  +RM+   + ++N    ++Y W  + Y  A NN W+P E+ +
Sbjct: 2   EQLQRNALFNPQGDTDLRLRRMIGGNTTNLNDFNNMRYSWVSDWYRQAMNNFWIPEEINL 61

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D+  +     L   ER    + L F    +SL +NN+   I  +++  E    L  Q 
Sbjct: 62  AQDIKDY---PNLPPAERKAYDKILSFLVFLDSLQSNNLPT-ISEYITANEVNLCLHIQT 117

Query: 122 FEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWN 178
           F+E VHS ++ Y++ S+   E   ++   ++    +  +  +    Y +  +  +     
Sbjct: 118 FQECVHSQSYSYMLDSICSPEERNDILYQWKTDEHLLRRNTFIGDCYNEFQAHRNKFCLM 177

Query: 179 KRRRSRILTRSLRFL 193
           K   +  +   + F 
Sbjct: 178 KACIANFILEGIYFY 192


>gi|225568010|ref|ZP_03777035.1| hypothetical protein CLOHYLEM_04083 [Clostridium hylemonae DSM
           15053]
 gi|225163184|gb|EEG75803.1| hypothetical protein CLOHYLEM_04083 [Clostridium hylemonae DSM
           15053]
          Length = 355

 Score =  161 bits (407), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 81/188 (43%), Gaps = 8/188 (4%)

Query: 10  IQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           +   +   +V  +RM+   + ++N    +KY W  + Y  A NN W+P E+ +  D+  +
Sbjct: 17  LFNPDGDTDVRSRRMIGGNTTNLNDFNNMKYTWVSDWYRQAMNNFWIPEEISLGVDIKDY 76

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
                L  +ER    + L F    +S+   N+   I  +++  E    L  Q F+EAVHS
Sbjct: 77  ---PRLPAEERRAYDKILSFLIFLDSIQTANLP-HIGEYITANEINLCLSIQTFQEAVHS 132

Query: 129 HTFQYIITSLGLDEG--ELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRI 185
            ++ Y++ ++   +   E+   ++E   +  +  +    Y +   + S     +   +  
Sbjct: 133 QSYSYMLDTICEPQKREEILYQWKEDEHLLLRNEFIGSLYNEFQETKSARSLVRTLIANY 192

Query: 186 LTRSLRFL 193
           +   + F 
Sbjct: 193 ILEGVYFY 200


>gi|282879357|ref|ZP_06288101.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           buccalis ATCC 35310]
 gi|282881358|ref|ZP_06290037.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           timonensis CRIS 5C-B1]
 gi|281298554|gb|EFA90979.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           buccalis ATCC 35310]
 gi|281304764|gb|EFA96845.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella
           timonensis CRIS 5C-B1]
          Length = 347

 Score =  160 bits (406), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 80/191 (41%), Gaps = 8/191 (4%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
            + +       ++  +RM+   + ++N    +KY WA + Y  A NN W+P E+ +  D 
Sbjct: 6   RNSLFNPNGDTDLRLRRMIGGNTTNLNDFNNMKYQWASDWYRQAMNNFWIPEEINLTQDT 65

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             +     L   ER    + L F    +SL +NN+   +  +++  E    L  QAF+E 
Sbjct: 66  KDY---PRLDKAERTAYDKILSFLVFLDSLQSNNLPS-LCEYITANEVNLCLHIQAFQEC 121

Query: 126 VHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA-LQYTQTLSSPSFHYWNKRRR 182
           VHS ++ Y++ ++   E   ++   ++    +  +  +    Y +       +   K   
Sbjct: 122 VHSQSYSYMLDTICSPEQRNDILYQWKTDEHLLRRNTFIGNCYNEFHEKQDLYALMKTCI 181

Query: 183 SRILTRSLRFL 193
           +  +   + F 
Sbjct: 182 ANFILEGIYFY 192


>gi|88856487|ref|ZP_01131145.1| ribonucleotide-diphosphate reductase beta subunit [marine
           actinobacterium PHSC20C1]
 gi|88814354|gb|EAR24218.1| ribonucleotide-diphosphate reductase beta subunit [marine
           actinobacterium PHSC20C1]
          Length = 332

 Score =  160 bits (406), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 43/159 (27%), Positives = 83/159 (52%), Gaps = 3/159 (1%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY WA + Y  A  N W P E+ + +D+A +K    +TD+ER  +   + +F  +E
Sbjct: 14  LKPIKYQWAMDLYDQAVANTWFPNEIQLGEDIADFKK---MTDEERHAVTFLMSYFNPNE 70

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVP 153
            LV   +   +Y ++S  EC  YL +Q +EEA H  +F+Y++ +  +D    +N + ++P
Sbjct: 71  LLVNKALAFGVYPYVSAAECSLYLAKQMWEEANHCMSFEYVLETFPIDREAAYNSHIDIP 130

Query: 154 SITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           S+  K  + L+Y + ++  +        +   +   + +
Sbjct: 131 SMARKEEFELKYIRRMTEQTLDINTIEGKQDFIRNLVAY 169


>gi|313887688|ref|ZP_07821370.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus
           harei ACS-146-V-Sch2b]
 gi|312846297|gb|EFR33676.1| ribonucleoside-diphosphate reductase, beta subunit [Peptoniphilus
           harei ACS-146-V-Sch2b]
          Length = 346

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 81/188 (43%), Gaps = 8/188 (4%)

Query: 10  IQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           +   +  +    +R++N  + ++N    LKY W  + Y  A NN W+P E+ +  D+  +
Sbjct: 8   LFNEKGDIETSKRRVINGNTTNLNDFNNLKYSWTSDWYRQAMNNFWIPEEINLSQDVKDY 67

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           +    L   E+    + L F    +SL    I   +  +++  E    L  Q ++E++HS
Sbjct: 68  RE---LDKAEKTAYDKILSFLIYLDSLQTAQIP-KLQSYVTANEINLCLSIQGYQESIHS 123

Query: 129 HTFQYIITSLGLDE--GELFNMYREVPSITAKANWA-LQYTQTLSSPSFHYWNKRRRSRI 185
            ++ YI+ ++   E   E+   Y++   +  +  +   QY     + +   + K   +  
Sbjct: 124 QSYSYILDTICSPEEREEILYQYKDDEVLLKRNKFIGDQYQDFYENENLDNFMKALIANY 183

Query: 186 LTRSLRFL 193
           +   + F 
Sbjct: 184 ILEGIYFY 191


>gi|319902178|ref|YP_004161906.1| ribonucleotide reductase [Bacteroides helcogenes P 36-108]
 gi|319417209|gb|ADV44320.1| ribonucleotide reductase [Bacteroides helcogenes P 36-108]
          Length = 347

 Score =  160 bits (405), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 81/195 (41%), Gaps = 8/195 (4%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           N    + +        +  +RM+   + ++N    ++Y W  + Y  A NN W+P E+ +
Sbjct: 2   NKLKRNALFNPSGDTEILHRRMIGGNTTNLNDFNNMRYKWVSDWYRQAMNNFWIPEEINL 61

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D   +     L   ER+   + L F    +SL +NN+   +  +++  E    L  QA
Sbjct: 62  TQDTKDY---PLLDKAERVAYDKILSFLVFLDSLQSNNLPT-LSEYITANEVNLCLHIQA 117

Query: 122 FEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA-LQYTQTLSSPSFHYWN 178
           F+E VHS ++ Y++ S+   E   ++   ++    +  +  +    Y +   S +     
Sbjct: 118 FQECVHSQSYSYMLDSICSPEERNDILYQWKTDEHLLKRNTFIGNCYNEFQESQNGFALV 177

Query: 179 KRRRSRILTRSLRFL 193
           K   +  +   + F 
Sbjct: 178 KTLIANYILEGIYFY 192


>gi|17158292|ref|NP_477710.1| wsv188 [Shrimp white spot syndrome virus]
 gi|14189948|gb|AAK55515.1|AF267731_1 ribonucleotide reductase small subunit [shrimp white spot syndrome
           virus]
 gi|15021490|gb|AAK77767.1|AF369029_98 ORF98, putative ribonucleotide reductase small subunit (RR2)
           [shrimp white spot syndrome virus]
 gi|17016586|gb|AAL33192.1| wsv188 [shrimp white spot syndrome virus]
 gi|19481835|gb|AAL89111.1| WSSV243 [shrimp white spot syndrome virus]
          Length = 413

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 6/158 (3%)

Query: 17  VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           V+     +     +     P+ +   WE Y       W   E+  + D   W+    LT 
Sbjct: 52  VDTSKHLLTRENPNRFVSRPIVHEDLWEMYKKEVACFWTLEEIDFERDPKDWEK---LTQ 108

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
           DE+  I + L FFASS+ +V  N+   + +    PE R +   Q   E++H + +  +I 
Sbjct: 109 DEKDFILQILAFFASSDGIVIENLTTRLRQVAQIPEARSFFDFQVGMESIHGNVYGELID 168

Query: 137 SLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
            L  DE +   LFN  +  P+I  K  WA+ + Q+ + 
Sbjct: 169 RLVPDEKDKAILFNAAQHFPAIKKKEQWAINWMQSNND 206


>gi|260912588|ref|ZP_05919119.1| ribonucleoside-diphosphate reductase [Prevotella sp. oral taxon 472
           str. F0295]
 gi|260633300|gb|EEX51459.1| ribonucleoside-diphosphate reductase [Prevotella sp. oral taxon 472
           str. F0295]
          Length = 348

 Score =  160 bits (404), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 82/197 (41%), Gaps = 8/197 (4%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEV 59
           M N    + +   +   ++  +RM+   + ++N    ++Y WA + Y  A NN W+P E+
Sbjct: 1   MDNKLKKNALFNPQGDTDLRQRRMIGGNTTNLNDFNNMRYTWASDWYRQAMNNFWIPEEI 60

Query: 60  PMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLR 119
            +  D   +     L   ER    + L F    +SL + N+   +   ++  E    L  
Sbjct: 61  NLTQDTKDY---PLLPPAERKAYDKILSFLVFLDSLQSANLPS-LTEFITANEVNLCLHI 116

Query: 120 QAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQ-YTQTLSSPSFHY 176
           QAF+E VHS ++ Y++ ++   E   ++   ++    +  +  +    Y +  ++     
Sbjct: 117 QAFQECVHSQSYSYMLDTICSPEERNDILYQWKTDEHLLRRNTFIGDCYNEFYANNDKAS 176

Query: 177 WNKRRRSRILTRSLRFL 193
             K   +  +   + F 
Sbjct: 177 LMKTLIANYILEGIYFY 193


>gi|269865627|ref|XP_002651990.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063361|gb|EED42066.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 290

 Score =  159 bits (403), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 41/150 (27%), Positives = 64/150 (42%), Gaps = 19/150 (12%)

Query: 48  SACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRH 107
              +  W   EV M  D   +   + LT +E+  IK  L FFA+S+ +V  N+V      
Sbjct: 1   MHESTFWTVEEVDMTFDCEHF---STLTPNEQFFIKYVLAFFAASDGIVNENLVERFSSE 57

Query: 108 LSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQ 164
           +   E + +   Q   E +HS  +  +I +L  D+ E   LFN    +PSI  KA WA +
Sbjct: 58  VQILEAKMFYGFQIAIENIHSEMYSKLIETLIRDKEEQTYLFNAIENIPSIRKKALWAQK 117

Query: 165 YTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           +  +              +   TR + F C
Sbjct: 118 WIAS-------------DTSFDTRCVAFAC 134


>gi|165969130|ref|YP_001651030.1| ribonucleotide reductase small subunit 2 [Orgyia leucostigma NPV]
 gi|164663626|gb|ABY65846.1| ribonucleotide reductase small subunit 2 [Orgyia leucostigma NPV]
          Length = 339

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 15/176 (8%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
              +LP+++   W  Y +A +  W   EV +  D   W +K  L + ER  IK  L FFA
Sbjct: 7   RKVILPIQHEKLWRAYKTALDCMWKVEEVDLSRDYEDWCTK--LNERERFFIKHILAFFA 64

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG---ELFN 147
           S++S+V  N++  +   +   E R +  +Q   E VHS  +  +I     +E    EL N
Sbjct: 65  SADSIVNINLIDYVRDAVGELEARYFYDQQILIENVHSEMYSLLIFEYIKNEKEQNELLN 124

Query: 148 MYREVPSITAKANWALQYTQT------LSSPSFHYWNKRRRS----RILTRSLRFL 193
            + +V  +  KA WAL++T++      L +P    W   R      ++  R + F 
Sbjct: 125 AFEDVKCVRKKAQWALKWTESSWWRDWLVNPLVKLWRTWRDGSSASKLARRMVAFA 180


>gi|304439119|ref|ZP_07399038.1| ribonucleotide-diphosphate reductase beta subunit [Peptoniphilus
           duerdenii ATCC BAA-1640]
 gi|304372478|gb|EFM26065.1| ribonucleotide-diphosphate reductase beta subunit [Peptoniphilus
           duerdenii ATCC BAA-1640]
          Length = 347

 Score =  159 bits (402), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 81/188 (43%), Gaps = 8/188 (4%)

Query: 10  IQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           +      +++  + ++N  + ++N    +KY W  + Y  A NN W+P E+ +  D+  +
Sbjct: 9   LFNENGDIDLQKRTIINGNTTNLNDFNNIKYKWTSDWYRQAMNNFWIPEEINLSQDVLDY 68

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           K    L + E+    + L F    +S+    +   +  +++  E    L  Q+F+E++HS
Sbjct: 69  K---ILDEAEKRAFDKILSFLIYLDSIQTAQLP-NLQAYITANEINLCLSIQSFQESIHS 124

Query: 129 HTFQYIITSLGLDEG--ELFNMYREVPSITAKANWAL-QYTQTLSSPSFHYWNKRRRSRI 185
            ++ YI+ ++   E   E+   Y    ++  +  +   QY   L+  +         +  
Sbjct: 125 QSYSYILDTICSPEERTEILYQYINDKTLLERNKYITDQYAGFLNDKTKGNLMHALIANY 184

Query: 186 LTRSLRFL 193
           +   + F 
Sbjct: 185 ILEGIYFY 192


>gi|56555145|gb|AAV98100.1| RR2 protein [Shrimp white spot syndrome virus]
          Length = 328

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 6/158 (3%)

Query: 17  VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           V+     +     +     P+ +   WE Y       W   E+  + D   W+    LT 
Sbjct: 28  VDTSKHLLTRENPNRFVSRPIVHEDLWEMYKKEVACFWTLEEIDFERDPKDWEK---LTQ 84

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
           DE+  I + L FFASS+ +V  N+   + +    PE R +   Q   E++H + +  +I 
Sbjct: 85  DEKDFILQILAFFASSDGIVIENLTTRLRQVAQIPEARSFFDFQVGMESIHGNVYGELID 144

Query: 137 SLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
            L  DE +   LFN  +  P+I  K  WA+ + Q+ + 
Sbjct: 145 RLVPDEKDKAILFNAAQHFPAIKKKEQWAINWMQSNND 182


>gi|171913278|ref|ZP_02928748.1| ribonucleotide-diphosphate reductase subunit beta [Verrucomicrobium
           spinosum DSM 4136]
          Length = 361

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 51/184 (27%), Positives = 93/184 (50%), Gaps = 2/184 (1%)

Query: 10  IQAGEKRVNVDDKRMLNARSDV-NQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           +   +       KR++N R  +   LLPLKY WA++ Y     NHW P ++ MQ D+  W
Sbjct: 14  LDQDKAEAAFHAKRVINGRQTMTFNLLPLKYQWAYDLYRVMKANHWEPEDIQMQKDVEQW 73

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           +S + + + ER +I   +G+F+++E +V +NI   +   ++ PE +  L R A EE +H+
Sbjct: 74  RSVDQVAEVERWIIMMGIGYFSAAEGIVGDNIQHVVRELVTAPELKLVLGRHAHEENIHA 133

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
            +  Y+I+SLG++  E   M+ ++P+I  K  +  + +  L            +  +   
Sbjct: 134 DSLLYMISSLGINPHECEAMFEDIPTIVKKNAFVTRSSNALRRDLDLTQI-ENKRLLAKN 192

Query: 189 SLRF 192
              F
Sbjct: 193 IFVF 196


>gi|260909050|gb|ACX54162.1| RR2 protein [Shrimp white spot syndrome virus]
 gi|260909052|gb|ACX54163.1| RR2 protein [Shrimp white spot syndrome virus]
 gi|260909054|gb|ACX54164.1| RR2 protein [Shrimp white spot syndrome virus]
 gi|260909056|gb|ACX54165.1| RR2 protein [Shrimp white spot syndrome virus]
          Length = 349

 Score =  158 bits (401), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 6/158 (3%)

Query: 17  VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           V+     +     +     P+ +   WE Y       W   E+  + D   W+    LT 
Sbjct: 37  VDTSKHLLTRENPNRFVSRPIVHEDLWEMYKKEVACFWTLEEIDFERDPKDWEK---LTQ 93

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
           DE+  I + L FFASS+ +V  N+   + +    PE R +   Q   E++H + +  +I 
Sbjct: 94  DEKDFILQILAFFASSDGIVIENLTTRLRQVAQIPEARSFFDFQVGMESIHGNVYGELID 153

Query: 137 SLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
            L  DE +   LFN  +  P+I  K  WA+ + Q+ + 
Sbjct: 154 RLVPDEKDKAILFNAAQHFPAIKKKEQWAINWMQSNND 191


>gi|7672989|gb|AAF66689.1|AF144620_1 ribonucleotide reductase small subunit [shrimp white spot syndrome
           virus]
          Length = 413

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 6/158 (3%)

Query: 17  VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           V+     +     +     P+ +   WE Y       W   E+  + D   W+    LT 
Sbjct: 52  VDTFKHLLTRENPNRFVSRPIVHEDLWEMYKKEVACFWTLEEIDFERDPKDWEK---LTQ 108

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
           DE+  I + L FFASS+ +V  N+   + +    PE R +   Q   E++H + +  +I 
Sbjct: 109 DEKDFILQILAFFASSDGIVIENLTTRLRQVAQIPEARSFFDFQVGMESIHGNVYGELID 168

Query: 137 SLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
            L  DE +   LFN  +  P+I  K  WA+ + Q+ + 
Sbjct: 169 RLVPDEKDKAILFNAAQHFPAIKKKEQWAINWMQSNND 206


>gi|148273612|ref|YP_001223173.1| ribonucleotide-diphosphate reductase subunit beta [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
 gi|170782700|ref|YP_001711034.1| ribonucleotide-diphosphate reductase subunit beta [Clavibacter
           michiganensis subsp. sepedonicus]
 gi|147831542|emb|CAN02508.1| putative ribonucleoside-diphosphate reductase beta subunit
           [Clavibacter michiganensis subsp. michiganensis NCPPB
           382]
 gi|169157270|emb|CAQ02455.1| ribonucleoside-diphosphate reductase beta subunit [Clavibacter
           michiganensis subsp. sepedonicus]
          Length = 331

 Score =  158 bits (400), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 41/159 (25%), Positives = 83/159 (52%), Gaps = 3/159 (1%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+ Y WA + Y  A  N W P E+ + +D+A +K    +TD+ER  I   + +F  +E
Sbjct: 15  LKPVNYQWAMDLYDQAVANTWFPNEIQLGEDIADFKK---MTDEERHAITFLMSYFNPNE 71

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVP 153
            LV   +   +Y +++ PEC  YL +Q +EEA H  +F+Y++ +  +D    +N + ++P
Sbjct: 72  LLVNKALAFGVYPYINAPECHLYLAKQMWEEANHCMSFEYVLETFPIDREAAYNSHVDIP 131

Query: 154 SITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           S+  K  + +++ + ++  +        +   +   + +
Sbjct: 132 SMARKEEFEVKFIKRMTEQTLDITTTEGKKDFVRNLVAY 170


>gi|153875510|ref|ZP_02003277.1| ribonucleotide-diphosphate reductase beta subunit [Beggiatoa sp.
           PS]
 gi|152068026|gb|EDN66723.1| ribonucleotide-diphosphate reductase beta subunit [Beggiatoa sp.
           PS]
          Length = 374

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 63/194 (32%), Positives = 107/194 (55%), Gaps = 5/194 (2%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           ++ L  I  G KR +  D +++  R  DV Q +P+KY    E++L+A  N W+P E+PM 
Sbjct: 24  SSSLDAISIGTKRPSSSDIKIIGGRGYDVRQPIPVKYTSVRERFLNARKNFWIPNEIPMG 83

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
           +D   W +   LT+ E  + K N+ +  +S++LV +N+  AI +H++  E RQY   Q  
Sbjct: 84  EDKLQW-NTGLLTEAEMWLFKSNISYLTASDNLVPDNLDNAILKHITANEMRQYFRHQIM 142

Query: 123 EEAVHSHTFQYIITSLGLDEG---ELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNK 179
           EE+ H  ++ +I+ S GLDE    ++FN+Y+EVP++T K NW L +T  + +        
Sbjct: 143 EESNHIESYLFILESFGLDEKGQGQIFNLYQEVPALTEKLNWNLTFTNNVVNSEAPRGTL 202

Query: 180 RRRSRILTRSLRFL 193
                +L   + + 
Sbjct: 203 EANRALLEDLISYY 216


>gi|190896480|gb|ACE96753.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 213

 Score =  158 bits (399), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 56/134 (41%), Gaps = 19/134 (14%)

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           DL  W++   LT DE+  I   L FFA+S+ +V  NI     + +   E R +   Q   
Sbjct: 1   DLGHWEN---LTPDEKHFISHVLAFFAASDGIVLENIAGRFMKEVQVSEARAFYGFQIAI 57

Query: 124 EAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           E +HS  +  ++ +   D  E   LF+    VP +  KA WAL++     S         
Sbjct: 58  ENIHSEMYSLLLETYIKDSTEKNRLFHAIETVPCVAKKAEWALRWIDGGES--------- 108

Query: 181 RRSRILTRSLRFLC 194
                  R + F C
Sbjct: 109 ----FAERLIAFAC 118


>gi|288928561|ref|ZP_06422408.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp.
           oral taxon 317 str. F0108]
 gi|288331395|gb|EFC69979.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp.
           oral taxon 317 str. F0108]
          Length = 348

 Score =  157 bits (398), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 82/197 (41%), Gaps = 8/197 (4%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEV 59
           M N    + +   +   ++  +RM+   + ++N    ++Y WA + Y  A NN W+P E+
Sbjct: 1   MDNKLKKNALFNPQGDTDLRLRRMIGGNTTNLNDFNNMRYTWASDWYRQAMNNFWIPEEI 60

Query: 60  PMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLR 119
            +  D   +     L   ER    + L F    +SL + N+   +   ++  E    L  
Sbjct: 61  NLTQDTKDY---PLLPPAERKAYDKILSFLVFLDSLQSANLPS-LTEFITANEVNLCLHI 116

Query: 120 QAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQ-YTQTLSSPSFHY 176
           QAF+E VHS ++ Y++ ++   E   ++   ++    +  +  +    Y +  ++     
Sbjct: 117 QAFQECVHSQSYSYMLDTICSPEERNDILYQWKTDEHLLRRNTFIGDCYNEFYANNDKAS 176

Query: 177 WNKRRRSRILTRSLRFL 193
             K   +  +   + F 
Sbjct: 177 LMKTLMANYILEGIYFY 193


>gi|329888543|ref|ZP_08267141.1| ribonucleotide reductase, small chain family protein [Brevundimonas
           diminuta ATCC 11568]
 gi|328847099|gb|EGF96661.1| ribonucleotide reductase, small chain family protein [Brevundimonas
           diminuta ATCC 11568]
          Length = 348

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA++ +      HWMP EVPM +D+  W     L D ER ++ +   FF  ++  
Sbjct: 24  PFRYPWAFDMWKKQQQVHWMPEEVPMGEDVKDWA--ANLNDGERNLLTQIFRFFTQADIE 81

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V +N +    R     E +  L   A  E +H   +  ++ ++G+ E E F  + E  ++
Sbjct: 82  VQDNYMERYGRVFKPTEVKMMLAAFANMETIHIAAYALLLETIGMPESE-FGAFMEYEAM 140

Query: 156 TAKANWALQY 165
             K ++  Q+
Sbjct: 141 KDKHDYMGQF 150


>gi|288800286|ref|ZP_06405744.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp.
           oral taxon 299 str. F0039]
 gi|288332499|gb|EFC70979.1| ribonucleoside-diphosphate reductase, beta subunit [Prevotella sp.
           oral taxon 299 str. F0039]
          Length = 347

 Score =  157 bits (398), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 79/195 (40%), Gaps = 8/195 (4%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           +    + +       ++  +RM+   + ++N    ++Y W  + Y  A NN W+P E+ +
Sbjct: 2   DQLKRNALFNPMGDTDLRLRRMIGGNTTNLNDFNNMRYQWVSDWYRQAMNNFWIPEEINL 61

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D   +     L   ER    + L F    +SL + N+   +  +++  E    L  QA
Sbjct: 62  TQDTKDY---PKLDKAERTAYDKILSFLVFLDSLQSTNLPS-LTEYVTANEVNLCLHIQA 117

Query: 122 FEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWN 178
           F+E VHS ++ Y++ ++   E   ++   ++    +  +  +    Y +       +   
Sbjct: 118 FQECVHSQSYSYMLDTICSPEERNDILYQWKTDEHLLKRNTFIGDLYNEFHEKRDRYTLV 177

Query: 179 KRRRSRILTRSLRFL 193
           K   +  +   + F 
Sbjct: 178 KTCIANYILEGIYFY 192


>gi|190896432|gb|ACE96729.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896434|gb|ACE96730.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896436|gb|ACE96731.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896438|gb|ACE96732.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896440|gb|ACE96733.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896444|gb|ACE96735.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896446|gb|ACE96736.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896448|gb|ACE96737.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896450|gb|ACE96738.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896452|gb|ACE96739.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896454|gb|ACE96740.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896456|gb|ACE96741.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896458|gb|ACE96742.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896460|gb|ACE96743.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896462|gb|ACE96744.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896464|gb|ACE96745.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896466|gb|ACE96746.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896468|gb|ACE96747.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896470|gb|ACE96748.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896472|gb|ACE96749.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896474|gb|ACE96750.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896476|gb|ACE96751.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896478|gb|ACE96752.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896482|gb|ACE96754.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896484|gb|ACE96755.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896486|gb|ACE96756.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896488|gb|ACE96757.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896492|gb|ACE96759.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896494|gb|ACE96760.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896496|gb|ACE96761.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896498|gb|ACE96762.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896500|gb|ACE96763.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896502|gb|ACE96764.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896504|gb|ACE96765.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896506|gb|ACE96766.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 213

 Score =  157 bits (397), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 37/134 (27%), Positives = 56/134 (41%), Gaps = 19/134 (14%)

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           DL  W++   LT DE+  I   L FFA+S+ +V  NI     + +   E R +   Q   
Sbjct: 1   DLGHWEN---LTPDEKHFISHVLAFFAASDGIVLENIAGRFMKEVQVSEARAFYGFQIAI 57

Query: 124 EAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           E +HS  +  ++ +   D  E   LF+    VP +  KA WAL++     S         
Sbjct: 58  ENIHSEMYSLLLETYIKDSTEKNRLFHAIETVPCVAKKAEWALRWIDGGES--------- 108

Query: 181 RRSRILTRSLRFLC 194
                  R + F C
Sbjct: 109 ----FAERLIAFAC 118


>gi|28493649|ref|NP_787810.1| ribonucleotide-diphosphate reductase subunit beta [Tropheryma
           whipplei str. Twist]
 gi|28572842|ref|NP_789622.1| ribonucleotide-diphosphate reductase subunit beta [Tropheryma
           whipplei TW08/27]
 gi|28410975|emb|CAD67360.1| ribonucleotide-diphosphate reductase small chain [Tropheryma
           whipplei TW08/27]
 gi|28476691|gb|AAO44779.1| ribonucleotide reductase beta chain [Tropheryma whipplei str.
           Twist]
          Length = 327

 Score =  157 bits (397), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 41/159 (25%), Positives = 84/159 (52%), Gaps = 3/159 (1%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P++Y WA + Y  A  N W P E+ + +D+A +K    +T +E+  +   + +F  +E
Sbjct: 14  LKPVRYQWAMDLYEQAVANTWFPNEIQLGEDIADFKK---MTHEEKHAVTFLMSYFNPNE 70

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVP 153
            LV   +   +Y +++ PEC  YL +Q +EEA H  +F+Y++ +  +D  E ++ + EVP
Sbjct: 71  LLVNKALAFGVYPYINAPECHLYLAKQMWEEANHCMSFEYVLETFPIDREEAYSSHIEVP 130

Query: 154 SITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           S+  K  + ++Y + ++  +        +   +   + +
Sbjct: 131 SMARKEEFEVEYIRRMTEETLDITTTEGKRDFIRNLVAY 169


>gi|291336893|gb|ADD96422.1| hypothetical protein [uncultured organism MedDCM-OCT-S09-C426]
          Length = 172

 Score =  157 bits (397), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 64/159 (40%), Positives = 97/159 (61%), Gaps = 1/159 (0%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
           VNQ+LP K+   W+ +L +  N+W P E+ M  D+  WK  + L+DDE+L++KR LGFFA
Sbjct: 15  VNQILPHKHKSVWDNFLKSVANNWSPAEINMSTDIKQWKG-DDLSDDEKLLVKRCLGFFA 73

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
            SESLVANN++L + R +++ ECRQY+LRQA+EE++H+ T      S GL   E+F  Y+
Sbjct: 74  GSESLVANNLLLTVARWVTDAECRQYILRQAYEESLHNWTVVTCCDSFGLKVSEVFEAYQ 133

Query: 151 EVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRS 189
            + SI AK ++ +  T  ++   F       +      S
Sbjct: 134 NIESIKAKDDFLMGITTDVNRQGFSTKTSEGKRIFKKSS 172


>gi|157736292|ref|YP_001488975.1| ribonucleotide-diphosphate reductase subunit beta [Arcobacter
           butzleri RM4018]
 gi|157698146|gb|ABV66306.1| ribonucleoside-diphosphate reductase, beta chain [Arcobacter
           butzleri RM4018]
          Length = 339

 Score =  156 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 5/186 (2%)

Query: 11  QAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
              + + +++D+R+    SD +     +KY WA   + +   N W P EV M  D   +K
Sbjct: 7   YNPDSKESLNDRRVFGGNSDGMINFTRMKYQWALNLWDTMEANTWFPREVQMTGDAKDYK 66

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
               LT  E+ M    L      +SL  NN++  I  +++ PE    L RQ++EEA HS 
Sbjct: 67  ---FLTPAEKRMYDLVLSQLIFMDSLQTNNLMDNINPYITAPEINACLARQSYEEANHSK 123

Query: 130 TFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSP-SFHYWNKRRRSRILTR 188
           ++  ++ S+  +   +++M++    +  K  +  +  + LS             +  +  
Sbjct: 124 SYAVMVESISDNTDLIYDMWKNDAKLREKNTYIAEVYKNLSGDIDDRKIVLALFANQILE 183

Query: 189 SLRFLC 194
            L F  
Sbjct: 184 GLYFYA 189


>gi|190896442|gb|ACE96734.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896490|gb|ACE96758.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 213

 Score =  156 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 19/134 (14%)

Query: 64  DLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFE 123
           DL  W++   LT DE+  I   L FF +S+ +V  NI     + +   E R +   Q   
Sbjct: 1   DLGHWEN---LTPDEKHFISHVLAFFVASDGIVLENIAGRFMKEVQVSEARAFYGFQIAI 57

Query: 124 EAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           E +HS  +  ++ +   D  E   LF+    VP +  KA WAL++     S         
Sbjct: 58  ENIHSEMYSLLLETYIKDSTEKNRLFHAIETVPCVAKKAEWALRWIDGGES--------- 108

Query: 181 RRSRILTRSLRFLC 194
                  R + F C
Sbjct: 109 ----FAERLIAFAC 118


>gi|315635423|ref|ZP_07890689.1| ribonucleotide-diphosphate reductase beta subunit [Arcobacter
           butzleri JV22]
 gi|315480181|gb|EFU70848.1| ribonucleotide-diphosphate reductase beta subunit [Arcobacter
           butzleri JV22]
          Length = 339

 Score =  156 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 5/186 (2%)

Query: 11  QAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
              + + +++D+R+    SD +     +KY WA   + +   N W P EV M  D   +K
Sbjct: 7   YNPDSKESLNDRRVFGGNSDGMINFTRMKYQWALNLWDTMEANTWFPREVQMTGDAKDYK 66

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
               LT  E+ M    L      +SL  NN++  I  +++ PE    L RQ++EEA HS 
Sbjct: 67  ---FLTPAEKRMYDLVLSQLIFMDSLQTNNLMDNINPYITAPEINACLARQSYEEANHSK 123

Query: 130 TFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSP-SFHYWNKRRRSRILTR 188
           ++  ++ S+  +   +++M++    +  K  +  +  + LS             +  +  
Sbjct: 124 SYAVMVESISDNTDLIYDMWKNDAKLREKNTYIAEVYKNLSGDIDDRKIVLALFANQILE 183

Query: 189 SLRFLC 194
            L F  
Sbjct: 184 GLYFYA 189


>gi|215275539|sp|P0C8I1|RIR2_ASFP4 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
          Length = 327

 Score =  156 bits (396), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 70/174 (40%), Gaps = 10/174 (5%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L   S    + P+++   W  Y    +  W   EV M  D+  W+    +   +R  
Sbjct: 2   EELLIENSHRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWE---AMPKSQREF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
            K+ L FF  ++ +V  N++    R +   E   +   QA +E VHS  +   + +L  D
Sbjct: 59  YKQILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPD 118

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           E E   +F+   + P I   A W  Q+      P+ +   +R         + F
Sbjct: 119 EKEQQRIFSGIEKHPIIKKMAQWVRQWM----DPTKNSLGERLVGFAAVEGILF 168


>gi|295691241|ref|YP_003594934.1| Ribonucleoside-diphosphate reductase [Caulobacter segnis ATCC
           21756]
 gi|295433144|gb|ADG12316.1| Ribonucleoside-diphosphate reductase [Caulobacter segnis ATCC
           21756]
          Length = 346

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 3/130 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA++ +      HWMP EVP+ +DL  W  K  L D ER ++ +   FF  S+  
Sbjct: 21  PFRYPWAYDFWKKQQQVHWMPEEVPLGEDLKDWAVK--LNDKERNLLTQIFRFFTQSDVE 78

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V +N +    R     E +  L   A  E +H   +  ++ ++G+ E E F+ + E  ++
Sbjct: 79  VQDNYMERYGRVFKPTEVKMMLASFANMETIHIAAYALLLETIGMPETE-FSAFMEYEAM 137

Query: 156 TAKANWALQY 165
             K ++   +
Sbjct: 138 KDKHDYMQTF 147


>gi|215275540|sp|P0C8I2|RIR2_ASFWA RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
          Length = 327

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 70/174 (40%), Gaps = 10/174 (5%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L   S    + P+++   W  Y    +  W   EV M  D+  W+    +   +R  
Sbjct: 2   EELLIENSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWE---AMPKPQREF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
            K+ L FF  ++ +V  N++    R +   E   +   QA +E VHS  +   + +L  D
Sbjct: 59  YKQILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPD 118

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           E E   +F+   + P I   A W  Q+      P+ +   +R         + F
Sbjct: 119 EKEQQRIFSGIEKHPIIKKMAQWVRQWM----DPTKNSLGERLVGFAAVEGILF 168


>gi|16124515|ref|NP_419079.1| ribonucleotide-diphosphate reductase subunit beta [Caulobacter
           crescentus CB15]
 gi|221233200|ref|YP_002515636.1| ribonucleotide-diphosphate reductase subunit beta [Caulobacter
           crescentus NA1000]
 gi|13421393|gb|AAK22247.1| ribonucleoside-diphosphate reductase, beta subunit [Caulobacter
           crescentus CB15]
 gi|220962372|gb|ACL93728.1| ribonucleoside-diphosphate reductase beta chain [Caulobacter
           crescentus NA1000]
          Length = 347

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 3/130 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA++ +      HWMP EVP+ +DL  W  K  L D ER ++ +   FF  S+  
Sbjct: 21  PFRYPWAYDFWKKQQQVHWMPEEVPLGEDLKDWAVK--LNDKERNLLTQIFRFFTQSDVE 78

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V +N +    R     E +  L   A  E +H   +  ++ ++G+ E E F+ + E  ++
Sbjct: 79  VQDNYMERYGRVFKPTEVKMMLASFANMETIHIAAYALLLETIGMPETE-FSAFMEYEAM 137

Query: 156 TAKANWALQY 165
            AK ++   +
Sbjct: 138 KAKHDYMQTF 147


>gi|9628152|ref|NP_042738.1| ribonucleotide reductase small subunit [African swine fever virus]
 gi|1172939|sp|P42492|RIR2_ASFB7 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|780414|gb|AAA65274.1| ribonucleotide reductase small subunit [African swine fever virus]
 gi|1097433|prf||2113434AT ribonucleotide reductase:SUBUNIT=small
          Length = 334

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 10/174 (5%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L   S    + P+++   W  Y    +  W   EV M  D+  W+    +   +R  
Sbjct: 9   EELLIENSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWE---AMPKPQREF 65

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
            K+ L FF  ++ +V  N++    R +   E   +   QA +E VHS  +   + +L  D
Sbjct: 66  YKQILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPD 125

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           E E   +F+   + P I   A W  Q+      P  +   +R         + F
Sbjct: 126 EKEQQRIFSGIEKHPIIKKMAQWVRQWM----DPDRNTLGERLVGFAAVEGILF 175


>gi|162849254|emb|CAN10143.1| Ribonucleotide reductase small subunit [African swine fever virus
           Benin 97/1]
          Length = 327

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 10/174 (5%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L   S    + P+++   W  Y    +  W   EV M  D+  W+    +   +R  
Sbjct: 2   EELLIENSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWE---AMPKPQREF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
            K+ L FF  ++ +V  N++    R +   E   +   QA +E VHS  +   + +L  D
Sbjct: 59  YKQILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPD 118

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           E E   +F+   + P I   A W  Q+      P  +   +R         + F
Sbjct: 119 EKEQQRIFSGIEKHPIIKKMAQWVRQWM----DPDRNTLGERLVGFAAVEGILF 168


>gi|50955339|ref|YP_062627.1| ribonucleotide-diphosphate reductase subunit beta [Leifsonia xyli
           subsp. xyli str. CTCB07]
 gi|50951821|gb|AAT89522.1| ribonucleoside-diphosphate reductase, beta chain [Leifsonia xyli
           subsp. xyli str. CTCB07]
          Length = 329

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 84/159 (52%), Gaps = 3/159 (1%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+KY WA + Y  A  N W P E+ + +D+A +K    +TD+ER  +   + +F  +E
Sbjct: 14  LKPVKYQWAMDLYDQAVANTWFPNEIQIGEDIADFKK---MTDEERHAVTFLMSYFNPNE 70

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVP 153
            LV   +   +Y +++  E   YL +Q +EEA H  +F+Y++ +  +D  + +N + +VP
Sbjct: 71  LLVNKALAFGVYPYINAAEAHLYLAKQMWEEANHCMSFEYVLETFPIDREQAYNSHVDVP 130

Query: 154 SITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           S+ +K  + +++ + ++  +        +   +   + +
Sbjct: 131 SMASKEEFEVRFIKRMTEQALDITTTEGKQDFIRNLIAY 169


>gi|162849427|emb|CAN10392.1| Ribonucleotide reductase small subunit [African swine fever virus
           OURT 88/3]
 gi|291289488|emb|CBH29145.1| BA71V-F334L [African swine fever virus E75]
 gi|303398729|emb|CBW46710.1| F334L [African swine fever virus Georgia 2007/1]
          Length = 334

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 10/174 (5%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L   S    + P+++   W  Y    +  W   EV M  D+  W+    +   +R  
Sbjct: 9   EELLIENSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWE---AMPKPQREF 65

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
            K+ L FF  ++ +V  N++    R +   E   +   QA +E VHS  +   + +L  D
Sbjct: 66  YKQILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPD 125

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           E E   +F+   + P I   A W  Q+      P  +   +R         + F
Sbjct: 126 EKEQQRIFSGIEKHPIIKKMAQWVRQWM----DPDRNTLGERLVGFAAVEGILF 175


>gi|329847182|ref|ZP_08262210.1| ribonucleotide reductase, small chain family protein [Asticcacaulis
           biprosthecum C19]
 gi|328842245|gb|EGF91814.1| ribonucleotide reductase, small chain family protein [Asticcacaulis
           biprosthecum C19]
          Length = 352

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 3/127 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA+E +      HW+P EVP+ +D   W SK  L+D ER ++ +   FF  S+  
Sbjct: 23  PFRYPWAFEYWRKQQQVHWIPEEVPLGEDCKDWASK--LSDSERNLLTQIFRFFTQSDIE 80

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V +N +    R     E +  L   A  E +H   +  ++ ++G+ E E F  + +  ++
Sbjct: 81  VQDNYLERYGRVFKPTEIKMMLSAFANMETIHIAAYALLLETIGMPESE-FGAFMDYEAM 139

Query: 156 TAKANWA 162
             K ++ 
Sbjct: 140 RDKHDFM 146


>gi|315497476|ref|YP_004086280.1| ribonucleoside-diphosphate reductase [Asticcacaulis excentricus CB
           48]
 gi|315415488|gb|ADU12129.1| Ribonucleoside-diphosphate reductase [Asticcacaulis excentricus CB
           48]
          Length = 350

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 3/130 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA++ +      HW+P EVP+ +D+  W SK  L D+ER ++ +   FF  S+  
Sbjct: 23  PFRYPWAFDFWQKQQQVHWLPEEVPLGEDVKDWASK--LNDNERNLLTQIFRFFTQSDIE 80

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V +N +    R     E +  L   A  E VH   +  ++ ++G+ E E F  + E  ++
Sbjct: 81  VQDNYMEKYGRVFKPTEIKMMLSAFANMETVHIAAYALLLETIGMPEAE-FGAFMEYEAM 139

Query: 156 TAKANWALQY 165
             K N+  ++
Sbjct: 140 RDKHNFMQKF 149


>gi|221633388|ref|YP_002522613.1| ribonucleotide-diphosphate reductase subunit beta [Thermomicrobium
           roseum DSM 5159]
 gi|221156578|gb|ACM05705.1| ribonucleoside-diphosphate reductase, beta subunit [Thermomicrobium
           roseum DSM 5159]
          Length = 328

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 61/173 (35%), Positives = 96/173 (55%), Gaps = 6/173 (3%)

Query: 22  KRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           +R+L        +L PL + WA+     A +N W P EVP+ DD+  W  +  L+D+ER 
Sbjct: 3   RRLLGGDPLAAVELFPLSHPWAYAHVQQAKHNTWFPEEVPLHDDVRDWHER--LSDEERR 60

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            ++  LGFF   ESLV  N++L++YR ++ PE R YL RQA+EEA H   F+Y+I +L L
Sbjct: 61  AVEMFLGFFNPMESLVTTNLLLSLYRAVTAPEARLYLARQAWEEANHVMAFEYVIKTLPL 120

Query: 141 DEGELFNMYREVPSITAKANWALQY-TQTLSSPSFHYWNKRRRSRILTRSLRF 192
           D   +F ++ E P++ AK  +  Q   Q L +P     +     R++   + +
Sbjct: 121 DRERVFGLHVEHPAVAAKELFQRQLAEQWLVTPDVE--SVEGLQRLVRNLVGY 171


>gi|215401283|ref|YP_002332587.1| ribonucleotide reductase small subunit [Helicoverpa armigera
           multiple nucleopolyhedrovirus]
 gi|198448783|gb|ACH88573.1| ribonucleotide reductase small subunit [Helicoverpa armigera
           multiple nucleopolyhedrovirus]
          Length = 313

 Score =  155 bits (393), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 74/166 (44%), Gaps = 17/166 (10%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
              L P+ +   +E Y  A    W   EV +  D   ++    L +D+R  I   LGFF+
Sbjct: 5   RKTLYPIVHEDLYEAYKRAEACFWRMEEVDLSKDYDDFQ--LKLNNDQRHFIMHVLGFFS 62

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFN 147
           +++S+V  N++  + + +   E   +   QA  E VH+  +  +I +L  D+ +   + N
Sbjct: 63  AADSIVNINVLDYMLQTVPELEAVYFYTFQAAMENVHTQMYGTLIITLIPDKKQQDLILN 122

Query: 148 MYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            +  +P +  K +WAL++             K ++  +  R + F 
Sbjct: 123 AFDNIPCVRKKDDWALKW------------TKNKKLTLAERLVAFA 156


>gi|311743885|ref|ZP_07717691.1| ribonucleotide-diphosphate reductase beta subunit [Aeromicrobium
           marinum DSM 15272]
 gi|311313015|gb|EFQ82926.1| ribonucleotide-diphosphate reductase beta subunit [Aeromicrobium
           marinum DSM 15272]
          Length = 357

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 81/159 (50%), Gaps = 3/159 (1%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+ Y WA E Y  A  N W P E+ + +DLA ++    ++D+ER  +   + +F  +E
Sbjct: 45  LKPVTYPWAMELYDQAVANTWFPNEIQLGEDLADFE---RMSDEERHALTFLMSYFNPNE 101

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVP 153
            LV   +   +Y +++  EC  YL +Q +EEA H  +F+Y++ +  +D    +  +  VP
Sbjct: 102 LLVNKALAFGVYPYVNAAECHLYLAKQMWEEANHCMSFEYVLETFPIDREAAYGSHVTVP 161

Query: 154 SITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           S+ AK  + +++ + ++  +        +   +   + +
Sbjct: 162 SMAAKEEFEIRFIRRMTEQTLDITTTEGKQDFVRNLVAY 200


>gi|302381236|ref|YP_003817059.1| ribonucleoside-diphosphate reductase [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302191864|gb|ADK99435.1| Ribonucleoside-diphosphate reductase [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 348

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 3/130 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA++ +      HWMP EVP+ +D   W     L D ER ++ +   FF  S+  
Sbjct: 23  PFRYPWAFDMWKKQQQVHWMPEEVPLGEDCKDWA--ANLNDKERNLLTQIFRFFTQSDIE 80

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           VA+N +    R     E +  L   A  E +H   +  ++ ++G+ E E F  + E  ++
Sbjct: 81  VADNYMEKYGRVFKPTEVKMMLSSFANMETIHIAAYALLLETIGMPESE-FGAFMEYEAM 139

Query: 156 TAKANWALQY 165
             K ++   +
Sbjct: 140 RDKHDFMQTF 149


>gi|296082342|emb|CBI21347.3| unnamed protein product [Vitis vinifera]
          Length = 227

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 3/109 (2%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L    D   + P++Y   WE Y  A  + W   EV +  D   W++   LT DE+ 
Sbjct: 6   EEPLLAPNPDRFCMFPIQYPEVWEMYKKAEASFWTAEEVDLSQDQRQWEN---LTSDEKH 62

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
            I   L FFA+S+ +V  N+     + +   E R +   Q   E +HS 
Sbjct: 63  FISHILAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSE 111


>gi|215401441|ref|YP_002332744.1| RR2b [Spodoptera litura nucleopolyhedrovirus II]
 gi|209483982|gb|ACI47415.1| RR2b [Spodoptera litura nucleopolyhedrovirus II]
          Length = 313

 Score =  155 bits (392), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 17/166 (10%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
              L P+++   W  Y  A +  W   EV +  D   +  K  LTD+ER  I++ L FFA
Sbjct: 5   RKVLFPIQHIDLWTAYKQALDCMWKVEEVDLSKDYDDFTQK--LTDNERNFIEKILAFFA 62

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFN 147
           +++S+V  NI+  + R +   E + +  +Q   E +H+  +  +I +L  DE +   L N
Sbjct: 63  AADSIVNINIIEHMQRTVPELEAQYFYNQQVLIECIHTEMYNLLIHALIKDEEKQATLLN 122

Query: 148 MYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            +  +P +  KA WA++Y +  +              +  R + F 
Sbjct: 123 GFESMPCVRRKAEWAMKYIENENV------------TLAERLIAFA 156


>gi|132618|sp|P26713|RIR2_ASFM2 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
          Length = 327

 Score =  154 bits (390), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 70/174 (40%), Gaps = 10/174 (5%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L   S    + P+++   W  Y    +  W   EV M  D+  W+    +   +R  
Sbjct: 2   EELLIENSQRFTIFPIQHPECWNWYKKLESMTWTAQEVDMCKDIDDWE---AMPKPQREF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
            K+ L FF  ++ +V  N++    R +   E   +   QA +E VHS  +   + +L  D
Sbjct: 59  YKQILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPD 118

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           E E   +F+   + P I   A W  Q+      P+ +   +R         + F
Sbjct: 119 EKEQQRIFSGIEKHPIIKKMAQWVRQWM----DPARNSLGERLVGFAAVEGILF 168


>gi|254418345|ref|ZP_05032069.1| ribonucleoside-diphosphate reductase, beta subunit [Brevundimonas
           sp. BAL3]
 gi|196184522|gb|EDX79498.1| ribonucleoside-diphosphate reductase, beta subunit [Brevundimonas
           sp. BAL3]
          Length = 349

 Score =  154 bits (390), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 63/130 (48%), Gaps = 3/130 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA++ +      HWMP EVP+ +D+  W S   L D+ER ++ +   FF  ++  
Sbjct: 24  PFRYPWAFDMWKKQQQVHWMPEEVPLGEDVKDWAS--TLNDNERNLLTQIFRFFTQADIE 81

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V +N +    R     E +  L      E +H   +  ++ ++G+ E E F  + E  ++
Sbjct: 82  VQDNYMERYGRVFKPTEIKMMLAAFGNMETIHIAAYALLLETIGMPESE-FGAFMEYEAM 140

Query: 156 TAKANWALQY 165
             K ++  Q+
Sbjct: 141 RDKHDYMGQF 150


>gi|119360103|gb|ABL66780.1| At5g40942 [Arabidopsis thaliana]
          Length = 231

 Score =  154 bits (389), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 2/109 (1%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++ +L    D   + P++Y   WE Y  A  + W   EV +  D   W+  N LT+DER 
Sbjct: 6   EEPILTPTPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWE--NSLTNDERH 63

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
            IK  L FFA+S+ +V  N+       +   E R +   Q   E +HS 
Sbjct: 64  FIKHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSE 112


>gi|313836278|gb|EFS73992.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL037PA2]
 gi|314928743|gb|EFS92574.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL044PA1]
 gi|314971220|gb|EFT15318.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL037PA3]
 gi|328906508|gb|EGG26283.1| ribonucleotide-diphosphate reductase subunit beta
           [Propionibacterium sp. P08]
          Length = 324

 Score =  153 bits (388), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 78/159 (49%), Gaps = 3/159 (1%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+ Y WA++ Y  A  N W P EV + +DLA +     +T DE   +   + +F  +E
Sbjct: 13  LKPVTYPWAYDLYNQAVANTWFPNEVQLDEDLADFA---RMTPDEHHALTHLMSYFNPNE 69

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVP 153
            LV   +   +Y +++  EC  YL +Q +EEA H   F+Y++ +  +D  E +  +  VP
Sbjct: 70  LLVNKALAFGVYPYVNAAECHLYLAKQMWEEANHCMAFEYVLETFPIDRDEAYRSHIHVP 129

Query: 154 SITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           S+  K  + +++ + ++  +        +   +   + +
Sbjct: 130 SMARKEAFEVEFIKRVTEQTLDITTVEGKQDFVRNLIAY 168


>gi|304321610|ref|YP_003855253.1| ribonucleoside-diphosphate reductase subunit beta [Parvularcula
           bermudensis HTCC2503]
 gi|303300512|gb|ADM10111.1| ribonucleoside-diphosphate reductase, beta subunit [Parvularcula
           bermudensis HTCC2503]
          Length = 340

 Score =  153 bits (388), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 3/130 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA++ +      HWMP EVP+ +D   W +K  LTD ER ++ +   FF  S+  
Sbjct: 20  PFRYPWAYDYWKKQQQVHWMPEEVPLGEDCKDWANK--LTDKERNLLTQIFRFFTQSDVE 77

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V  N +          E R  L   +  E +H   +  ++ ++G+ E E F+ + +  ++
Sbjct: 78  VGANYMENYMPLFKPVEVRMMLAAFSNMETIHIAAYALLLETIGMPEVE-FSAFMDYEAM 136

Query: 156 TAKANWALQY 165
            AK ++  ++
Sbjct: 137 AAKHDYLGRF 146


>gi|197103810|ref|YP_002129187.1| ribonucleoside-diphosphate reductase, beta subunit
           [Phenylobacterium zucineum HLK1]
 gi|196477230|gb|ACG76758.1| ribonucleoside-diphosphate reductase, beta subunit
           [Phenylobacterium zucineum HLK1]
          Length = 350

 Score =  153 bits (388), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 3/134 (2%)

Query: 32  NQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFAS 91
               P +Y WA++ +      HWMP E+P+ +DL  W SK  L D ER ++ +   FF  
Sbjct: 20  FAYKPFRYPWAYDYWKKQQQVHWMPEEIPLGEDLKDWASK--LNDRERNLLTQIFRFFTQ 77

Query: 92  SESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYRE 151
           S+  V +N +    R     E +  L   +  E +H   +  ++ ++G+ + E F  + +
Sbjct: 78  SDVEVNDNYMERYARVFKPTEVKMMLAAFSNMETIHIAAYALLLETIGMPDAE-FTAFLD 136

Query: 152 VPSITAKANWALQY 165
             ++  K ++   +
Sbjct: 137 YQAMRDKHDYMQSF 150


>gi|284929768|ref|YP_003422290.1| ribonucleotide reductase, subunit beta [cyanobacterium UCYN-A]
 gi|284810212|gb|ADB95909.1| ribonucleotide reductase, beta subunit [cyanobacterium UCYN-A]
          Length = 354

 Score =  153 bits (388), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 85/193 (44%), Gaps = 8/193 (4%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
             +PI   +    ++++ +    + ++ QL  ++Y WA   Y     N W+P ++ +  D
Sbjct: 12  STNPIFNPDGDDAIENRAIWFGNTTNLMQLNDVRYSWAVGLYQQMRENFWIPQKLDITQD 71

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           +  +   + LT+DER      L +    +S+   NI   +   ++ PE    +  Q  +E
Sbjct: 72  VTDY---SNLTEDERYAYDGILSYLTFLDSIQTCNIP-HLKNSITAPEVSLCMAEQISQE 127

Query: 125 AVHSHTFQYIITSLGLD--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRR 181
            +H+ ++QYII ++       +++  +RE   + ++  +  + Y + +  P+   +    
Sbjct: 128 GMHNQSYQYIIETIVPPDRRNQVYEFWREDKVLRSRCEFIAKIYQKYIDDPTAENYFTAL 187

Query: 182 RSRILTRSLRFLC 194
            +  L   L F  
Sbjct: 188 MADFLLEGLYFYN 200


>gi|20069937|ref|NP_613141.1| ribonucleotide reductase small subunit [Mamestra configurata NPV-A]
 gi|20043331|gb|AAM09166.1| ribonucleotide reductase small subunit [Mamestra configurata NPV-A]
 gi|33331769|gb|AAQ11077.1| putative ribonucleotide reductase small subunit-like protein
           [Mamestra configurata NPV-A]
          Length = 313

 Score =  153 bits (388), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 38/165 (23%), Positives = 73/165 (44%), Gaps = 9/165 (5%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
              L P+ +   +E Y  A    W   EV +  D   ++    L +D+R  I   LGFF+
Sbjct: 5   RKTLYPIVHEDLYEAYKRAEACFWRMEEVDLSKDYDDFQ--LKLNNDQRHFIMHVLGFFS 62

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFN 147
           +++S+V  N++  + + +   E   +   QA  E VH+  +  +I  L  D+     + N
Sbjct: 63  AADSIVNINVLNYMLQTVPELEAVYFYTFQAAMENVHTQMYGTLIIELIPDKKHQDLILN 122

Query: 148 MYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
            +  VP +  K +WAL++ +         + +R  +  +   + F
Sbjct: 123 AFDNVPCVRKKDDWALKWIEN----DKATFAERLVAFAIVEGVFF 163


>gi|74229799|ref|YP_309003.1| ribonucleotide reductase small subunit (rr2) [Trichoplusia ni SNPV]
 gi|72259713|gb|AAZ67484.1| ribonucleotide reductase small subunit (rr2) [Trichoplusia ni SNPV]
          Length = 318

 Score =  153 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 9/165 (5%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
              L P+     W+ Y  A + HW   E+ M  D   W +K  L D ER  +K  L FFA
Sbjct: 6   RKTLFPIVNEDLWQSYKKALDCHWKVEEIDMSKDFDDWNNK--LNDKERFFLKHVLAFFA 63

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFN 147
           +++ +V  NI+  +   +   E   +  +Q   E VH+  +  ++     D  E   + N
Sbjct: 64  AADVIVNTNIIEHMQSAVPEMEASFFYAQQTSIECVHTEMYNILVVEYIKDPQECDRILN 123

Query: 148 MYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
               + S+  KA WA ++ ++ ++     + +R  +  +   + F
Sbjct: 124 AIEHIDSVKRKATWAQKWIESQTA----TFAERMVAFAIVEGVFF 164


>gi|167648664|ref|YP_001686327.1| ribonucleotide-diphosphate reductase subunit beta [Caulobacter sp.
           K31]
 gi|167351094|gb|ABZ73829.1| Ribonucleoside-diphosphate reductase [Caulobacter sp. K31]
          Length = 346

 Score =  153 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 3/130 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA E +      HWMP EVP+ +DL  W  K  L D ER ++ +   FF  S+  
Sbjct: 20  PFRYPWAHEFWKKQQQVHWMPEEVPLGEDLKDWAVK--LNDKERNLLTQIFRFFTQSDIE 77

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           VA+N +    R     E +  L   A  E +H   +  ++ ++G+ E E F  + +  ++
Sbjct: 78  VADNYMERYGRVFKPTEVKMMLSSFANMETIHIAAYALLLETIGMPESE-FGAFMQYQAM 136

Query: 156 TAKANWALQY 165
             K ++  ++
Sbjct: 137 RDKHDFMQKF 146


>gi|68304258|ref|YP_249726.1| RR2 [Chrysodeixis chalcites nucleopolyhedrovirus]
 gi|67973087|gb|AAY84053.1| RR2 [Chrysodeixis chalcites nucleopolyhedrovirus]
          Length = 318

 Score =  153 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 9/165 (5%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
              LLP+     W+ Y  A + HW   E+ M  D   W  K  L D ER  +K  L FFA
Sbjct: 6   RKTLLPIVNEDLWQSYKKAVDCHWKVEEIDMSKDFDDWNKK--LNDKERFFLKHVLAFFA 63

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFN 147
           +++ +V  NI+  +   +   E   +  +Q F E VH+  +  ++     D  E   + N
Sbjct: 64  AADVIVNTNIIEHMQSAVPELEASFFYAQQTFIECVHTEMYNILVVEYIKDPQECDRILN 123

Query: 148 MYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
               + S+  KA WA ++ +  S+     + +R  +  +   + F
Sbjct: 124 AIEHIDSVKQKAAWAQKWIENQSA----TFAERMVAFAIVEGVFF 164


>gi|114568952|ref|YP_755632.1| ribonucleotide-diphosphate reductase subunit beta [Maricaulis maris
           MCS10]
 gi|114339414|gb|ABI64694.1| Ribonucleoside-diphosphate reductase [Maricaulis maris MCS10]
          Length = 345

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 64/130 (49%), Gaps = 3/130 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA++ +      HWMP EVP+ +D   W +K  L D ER ++ +   FF  S+  
Sbjct: 20  PFRYPWAYDFWKKQQQVHWMPEEVPLGEDCKDWATK--LNDGERNLLTQIFRFFTQSDVE 77

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V +N +    R     E +  L   +  E +H   +  ++ ++G+ + E F+ + E  ++
Sbjct: 78  VNDNYMERYSRVFRPTEVKMMLASFSNMETIHIAAYALLLETIGMPDSE-FSAFMEYQAM 136

Query: 156 TAKANWALQY 165
             K ++  ++
Sbjct: 137 ADKHDYMQRF 146


>gi|284043177|ref|YP_003393517.1| ribonucleoside-diphosphate reductase [Conexibacter woesei DSM
           14684]
 gi|283947398|gb|ADB50142.1| Ribonucleoside-diphosphate reductase [Conexibacter woesei DSM
           14684]
          Length = 364

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 49/151 (32%), Positives = 89/151 (58%), Gaps = 1/151 (0%)

Query: 23  RMLNARSDV-NQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           R++  R  +   LLPL+YGWA+E Y +   NHW P +V M  D+  W+ +  L++ +R +
Sbjct: 30  RVVGGRETMTFNLLPLRYGWAYELYRTMKANHWEPEDVQMAKDIEQWRDERALSEIDRWI 89

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           ++  +G+F+++E +V +NI+  +   ++  E +  L R A EE +H+ +  Y+I+SLG+D
Sbjct: 90  VRMAIGYFSAAEGIVGDNILHVVRELMTASELKLVLGRHAHEENIHADSLLYMISSLGID 149

Query: 142 EGELFNMYREVPSITAKANWALQYTQTLSSP 172
             E   M+ ++P+I AK  +    +Q L   
Sbjct: 150 PHECEAMFDDIPTIRAKNAFVTSASQALRRD 180


>gi|215275538|sp|P0C8I0|RIR2_ASFK5 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
          Length = 327

 Score =  152 bits (385), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 10/174 (5%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L   S    + P+++   W  Y    +  W   EV M  D+  W+    +   +R  
Sbjct: 2   EELLIEDSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWE---AMPKPQREF 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
            K+ L FF  ++ +V  N++    R +   E   +   QA +E VHS  +   + +L  D
Sbjct: 59  YKQILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPD 118

Query: 142 EGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           E E   +F+   + P I   A W  Q+      P  +   +R         + F
Sbjct: 119 EKEQQRIFSGIEKHPIIRKMAQWVQQWM----DPVKNSLGERLVGFAAVEGILF 168


>gi|149194868|ref|ZP_01871962.1| ribonucleotide-diphosphate [Caminibacter mediatlanticus TB-2]
 gi|149135027|gb|EDM23509.1| ribonucleotide-diphosphate [Caminibacter mediatlanticus TB-2]
          Length = 346

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 37/173 (21%), Positives = 70/173 (40%), Gaps = 7/173 (4%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
                +  L  L Y WA+  +     N W P EV + +D   ++    L   E+ M  + 
Sbjct: 24  GCTEGIINLNKLSYPWAYNLWEMMLANTWFPREVDLTEDARQYRQ---LLPAEKRMYDKA 80

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL 145
           L      +S+  NN    +   ++ PE    L+RQAFEEA+HS ++  ++ S+ L+  E+
Sbjct: 81  LSQLIFMDSIQTNNTPDHVNPWITAPEVNMCLVRQAFEEALHSQSYAVMVDSISLNTDEI 140

Query: 146 FNMYREVPSITAKANWA----LQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + M+R   ++  K  +      ++     +           +      + F  
Sbjct: 141 YEMWRADENLRKKNEFIGNVYEEWGIKALNGDDEAKIYMIVANQALEGIYFYN 193


>gi|229827460|ref|ZP_04453529.1| hypothetical protein GCWU000182_02849 [Abiotrophia defectiva ATCC
           49176]
 gi|229788398|gb|EEP24512.1| hypothetical protein GCWU000182_02849 [Abiotrophia defectiva ATCC
           49176]
          Length = 354

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 38/176 (21%), Positives = 83/176 (47%), Gaps = 8/176 (4%)

Query: 22  KRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           + +LN  + ++ +   +KY WA   Y +  NN W+P E+ + +D+   K  + LT  ER 
Sbjct: 28  EGILNGNTTNLREWNRIKYDWANVMYRTMLNNFWIPEEISLGEDI---KQFSYLTAGERK 84

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
              + + F    +S+   N+   + R+++  E    L  QAF+E +H+ ++ YI+ ++  
Sbjct: 85  AFDKIISFLNFLDSIQCENLP-NLARYITAAEVASLLNVQAFQEEIHAQSYSYILDTVTN 143

Query: 141 D--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
                ++++ +RE P +  +  +    Y +    PS   + +   +  +   + F 
Sbjct: 144 PVTRDKIYDEWREDPILLRRNKFIADMYQRFADDPSTENFVRSVMANYILEGIYFY 199


>gi|126654703|ref|ZP_01726237.1| hypothetical protein CY0110_09717 [Cyanothece sp. CCY0110]
 gi|126623438|gb|EAZ94142.1| hypothetical protein CY0110_09717 [Cyanothece sp. CCY0110]
          Length = 352

 Score =  152 bits (384), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 83/193 (43%), Gaps = 8/193 (4%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
            ++PI        ++++ +    + ++ QL  ++Y WA   Y     N W+P  + +  D
Sbjct: 10  SINPIFNPGGDDAIENRSIWFGNTTNLMQLNDVRYAWAVGLYQQMRENFWIPQRLDVTQD 69

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
           +  + +   LTDDER      L +    +S+   NI   +   ++ PE    +  Q  +E
Sbjct: 70  VTDYAN---LTDDERYAYDGILSYLTFLDSVQTCNIP-HLKSSITAPEISLCMAEQISQE 125

Query: 125 AVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRR 181
            +H+ ++QY+I ++   E   +++  +R    +  +  +  + Y + +  P+   +    
Sbjct: 126 GMHNQSYQYLIETIIPPERRTQVYEFWRTDTVLKDRCEFIAKLYQKYIDDPTSENYFIAL 185

Query: 182 RSRILTRSLRFLC 194
            +  L   L F  
Sbjct: 186 MADFLLEGLYFYN 198


>gi|51830370|gb|AAU09736.1| YGR180C [Saccharomyces cerevisiae]
          Length = 345

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 70/187 (37%), Gaps = 17/187 (9%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
           +  + +    D+ +L   S    + P+KY   W  Y     + W   E+ +  D   ++ 
Sbjct: 14  ERHDMKEAEKDEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQK 73

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              LTDD++  I   L    SS++LV   ++      L NPE + +   Q   E +HS  
Sbjct: 74  ---LTDDQKTYIGNLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIHSEV 130

Query: 131 FQYIITSLGLDEGEL--FNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
           +  ++ +   D   +  F     +P +  KA +  ++                 S    R
Sbjct: 131 YSMMVDAFFKDPKNIPLFKEIANLPEVKHKAAFIERWISN------------DDSLYAER 178

Query: 189 SLRFLCR 195
            + F  +
Sbjct: 179 LVAFAAK 185


>gi|227498392|ref|ZP_03928542.1| ribonucleoside-diphosphate reductase [Acidaminococcus sp. D21]
 gi|226903854|gb|EEH89772.1| ribonucleoside-diphosphate reductase [Acidaminococcus sp. D21]
          Length = 342

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 37/176 (21%), Positives = 82/176 (46%), Gaps = 8/176 (4%)

Query: 22  KRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           + M+   + ++ +   +KY WA   Y +  NN W+P E+ + +D+   K    LTD ER 
Sbjct: 16  QAMIGGNTTNLREWNRIKYDWANTLYRTMLNNFWIPEEISLNEDI---KQFPYLTDSERR 72

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
              + + F    +S+ + N+   I R+++ PE    L  QAF+E +H+ ++ YI+ ++  
Sbjct: 73  AFDKIISFLNFLDSVQSENLP-NISRYITAPEVASLLNIQAFQEEIHAQSYSYILDTVTN 131

Query: 141 D--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
                ++++ +R   ++  +  +    Y +    P+   +     +  +   + F 
Sbjct: 132 PITRDKIYDEWRTDSTLLERNRFIADAYQRFSDDPNEGNFLHTIVANYILEGIYFY 187


>gi|22549454|ref|NP_689227.1| putative ribonucleotide reductase small subunit-like protein
           [Mamestra configurata NPV-B]
 gi|22476633|gb|AAM95039.1| putative ribonucleotide reductase small subunit-like protein
           [Mamestra configurata NPV-B]
          Length = 313

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 37/166 (22%), Positives = 73/166 (43%), Gaps = 17/166 (10%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
              L P+ +   +E Y  A    W   EV +  D   ++    L +D+R  I   LGFF+
Sbjct: 5   RKTLYPIVHEDLYEAYKRAEACFWRMEEVDLSKDYDDFQ--LKLNNDQRHFIMHVLGFFS 62

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFN 147
           +++S+V  N++  + + +   E   +   QA  E VH+  +  +I +L  D+ +   + N
Sbjct: 63  AADSIVNINVLDYMLQTVPELEAVYFYTFQAAMENVHTQMYGTLIITLIPDKKQQDLILN 122

Query: 148 MYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            +  +  +  K +WAL++             K ++  +  R + F 
Sbjct: 123 AFDNISCVRKKDDWALKW------------TKNKKLTLAERLVAFA 156


>gi|330994651|ref|ZP_08318574.1| putative ribonucleoside-diphosphate reductase small subunit
           [Gluconacetobacter sp. SXCC-1]
 gi|329758292|gb|EGG74813.1| putative ribonucleoside-diphosphate reductase small subunit
           [Gluconacetobacter sp. SXCC-1]
          Length = 365

 Score =  151 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 36/163 (22%), Positives = 76/163 (46%), Gaps = 7/163 (4%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
           ++T ++   A   +  ++   +L A        P +Y WA++ +L+    HW+P EVP+ 
Sbjct: 28  DSTAMTDTAAPVAQPPMEQS-LLTANP---VYKPFRYPWAYDAWLTQQRVHWLPEEVPLA 83

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
           DD+  W     LT+ ER ++ +   FF  S+  V N  +    +     E    L   + 
Sbjct: 84  DDVKDWH--RTLTESERHLVTQIFRFFTQSDVEVNNCYMKHYSQVFKPTEVLMMLSAFSN 141

Query: 123 EEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQY 165
            E +H   + +++ ++G+ E E ++ + +   +  K ++  Q+
Sbjct: 142 IETIHIAAYSHLLDTIGMPETE-YSAFLKYKEMKDKYDYMQQF 183


>gi|162147608|ref|YP_001602069.1| ribonucleotide-diphosphate reductase subunit beta
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209542240|ref|YP_002274469.1| ribonucleotide-diphosphate reductase subunit beta
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786185|emb|CAP55767.1| putative ribonucleotide reductase small subunit [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209529917|gb|ACI49854.1| Ribonucleoside-diphosphate reductase [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 353

 Score =  151 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 74/165 (44%), Gaps = 6/165 (3%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           + N TG +P  A +         +L +        P +Y WA++ +L+    HW+P EVP
Sbjct: 4   ITNATGTAPESAPQPTGVEARLDLLTSNP---IYKPFRYPWAYDAWLTQQRVHWLPEEVP 60

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           + DD+  W     LT+ E+ ++ +   FF  S+  V N  +    R     E    L   
Sbjct: 61  LADDVKDWH--RTLTESEQHLVTQIFRFFTQSDVEVNNCYMKHYSRVFKPTEVLMMLSAF 118

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQY 165
           +  E +H   + +++ ++G+ E E ++ + +   +  K ++   +
Sbjct: 119 SNIETIHIAAYSHLLDTIGMPEME-YSAFLKYKEMKDKYDYMQGF 162


>gi|172036555|ref|YP_001803056.1| ribonucleoside-diphosphate reductase beta subunit [Cyanothece sp.
           ATCC 51142]
 gi|171698009|gb|ACB50990.1| ribonucleoside-diphosphate reductase beta subunit [Cyanothece sp.
           ATCC 51142]
          Length = 352

 Score =  151 bits (383), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 83/192 (43%), Gaps = 8/192 (4%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           ++PI   E    ++++ +    + ++ QL  ++Y WA   Y     N W+P  + +  D+
Sbjct: 11  INPIFNPEGDDAIENRSIWFGNTTNLMQLNDVRYTWAVGLYQQMRENFWIPQRLDVTQDV 70

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             + +   LTDDER      L +    +S+   NI   +   ++ PE    +  Q  +E 
Sbjct: 71  TDYAN---LTDDERYAYDGILSYLTFLDSVQTCNIP-HLKSSITAPEISLCMAEQISQEG 126

Query: 126 VHSHTFQYIITSLGLD--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           +H+ ++QY+I ++       ++++ +R    +  +  +  + Y + +   +   +     
Sbjct: 127 MHNQSYQYLIETIIPPDRRTQVYDFWRTDKVLKDRCEFIAKLYQKYIDDATPENYFIALM 186

Query: 183 SRILTRSLRFLC 194
           +  L   L F  
Sbjct: 187 ADFLLEGLYFYN 198


>gi|9634266|ref|NP_037805.1| ORF45 ribonucleotide reductase small subunit (rr2) [Spodoptera
           exigua MNPV]
 gi|6960505|gb|AAF33575.1|AF169823_45 ORF45 ribonucleotide reductase small subunit (rr2) [Spodoptera
           exigua MNPV]
          Length = 313

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 17/166 (10%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
              L P+++   W  Y  A +  W   EV +  D   +  K  LTD+ER  I++ L FFA
Sbjct: 5   RKVLFPIQHIDLWASYKQALDCMWKVEEVDLSKDYDDFTQK--LTDNERNFIEKILAFFA 62

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFN 147
           +++S+V  NI+  + R +   E + +  +Q   + +H+  +  +I +L  DE +   L N
Sbjct: 63  AADSIVNINIIEHMQRTVPELEAQYFYNQQVLIQCIHTEMYNLLIHALIKDEKKQEMLLN 122

Query: 148 MYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            +  +P +  KA WA++Y                +  +  R + F 
Sbjct: 123 GFENMPCVRRKAEWAMKYID------------DEKITLAERLVAFA 156


>gi|326792202|ref|YP_004310023.1| ribonucleotide reductase [Clostridium lentocellum DSM 5427]
 gi|326542966|gb|ADZ84825.1| ribonucleotide reductase [Clostridium lentocellum DSM 5427]
          Length = 342

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 38/176 (21%), Positives = 85/176 (48%), Gaps = 8/176 (4%)

Query: 22  KRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++M+N  + ++ +   +KY WA   Y +  NN W+P E+ + +D+   K    LTD ER 
Sbjct: 16  QQMINGNTTNLREWNRIKYDWAQTLYRTMLNNFWIPEEIALNEDV---KGFPFLTDGERH 72

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
              + + F    +S+ + N+   + R+++ PE    L  QAF+E +H+ ++ YI+ ++  
Sbjct: 73  AFDKIIAFLNFLDSIQSENLP-HLSRYITAPEVASLLNIQAFQEEIHAQSYSYILDTVTN 131

Query: 141 D--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
                ++++ +RE   +  +  +    Y +    P+   + +   +  +   + F 
Sbjct: 132 PVTRDKIYDQWREDEELLKRNRFIADIYERFNEEPNDKNFLRAIMANYILEGIYFY 187


>gi|218442220|ref|YP_002380549.1| ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 7424]
 gi|218174948|gb|ACK73681.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 7424]
          Length = 355

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 84/198 (42%), Gaps = 8/198 (4%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEV 59
           ++     +PI   +    ++++ M     +++ QL  ++Y WA   Y     N W+P  +
Sbjct: 8   LSQTMPKTPIFNPDGDDRIENRTMWFGNITNLMQLNDVRYNWAVGLYKQMRENFWIPERL 67

Query: 60  PMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLR 119
            +  D+  +     LTD+ER      L +    +S+   NI   +   ++ PE    +  
Sbjct: 68  DITQDVTDY---WNLTDEERYAFDGILSYLTFLDSIQTCNIP-HLKSSVTAPEISLCMAE 123

Query: 120 QAFEEAVHSHTFQYIITSLGL--DEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHY 176
           Q  +E +H+  +QY+I ++       ++++ +R    + A+  +    Y + + +PS   
Sbjct: 124 QISQEGMHNQAYQYMIETIIPLEKRNQVYDFWRTDKVLKARCEFIAGLYQKYIDTPSIEN 183

Query: 177 WNKRRRSRILTRSLRFLC 194
           +     +  L   L F  
Sbjct: 184 YFVALMADYLLEGLYFYN 201


>gi|296282225|ref|ZP_06860223.1| ribonucleotide-diphosphate reductase subunit beta [Citromicrobium
           bathyomarinum JL354]
          Length = 354

 Score =  151 bits (382), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 3/135 (2%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
                P +Y WA++ +      HWMP EVP+ +D   W  K  L++ ER ++ +   FF 
Sbjct: 7   RKTYKPFEYPWAYDFWKRQQQVHWMPEEVPLGEDCRDWAQK--LSEHERNLLTQIFRFFT 64

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
            ++  V +       R     E +  L   +  E +H   + +++ ++G+ E E + M+ 
Sbjct: 65  QADVEVQDCYHEKYGRVFKPTEIKMMLASFSNMETIHIAAYSHLLDTIGMPESE-YGMFL 123

Query: 151 EVPSITAKANWALQY 165
           E   +  K ++  Q+
Sbjct: 124 EYEEMKDKHDYLQQF 138


>gi|294055010|ref|YP_003548668.1| Ribonucleoside-diphosphate reductase [Coraliomargarita akajimensis
           DSM 45221]
 gi|293614343|gb|ADE54498.1| Ribonucleoside-diphosphate reductase [Coraliomargarita akajimensis
           DSM 45221]
          Length = 360

 Score =  151 bits (382), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 51/161 (31%), Positives = 88/161 (54%), Gaps = 2/161 (1%)

Query: 32  NQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFAS 91
             +LPLKY WA++ Y +  NNHW P ++PMQ D+ LW+S + L+D ER +IK  +G+F++
Sbjct: 37  FNILPLKYQWAYDLYKTMKNNHWEPEDIPMQKDVELWRSAD-LSDAERWIIKMAIGYFSA 95

Query: 92  SESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYRE 151
           +E +V +NI       ++ PE +  L R A EE +H+ +  Y+I+SLG++  E   M+ +
Sbjct: 96  AEGIVGDNIQHVTRELVTAPELKLLLGRHAHEENIHADSLVYMISSLGINPHECEAMFED 155

Query: 152 VPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           + +I  K  + +  ++ L           +          F
Sbjct: 156 IDTIERKTAFVVNNSRGLRRDMDLTTTADK-QAFTKNMFLF 195


>gi|257062099|ref|YP_003139987.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8802]
 gi|256592265|gb|ACV03152.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8802]
          Length = 355

 Score =  151 bits (381), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 83/192 (43%), Gaps = 8/192 (4%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           ++PI        ++++ +    + ++ QL  ++Y WA   Y     N W+P  + +  D+
Sbjct: 14  INPIFNPSGDDAIENRSIWFGNTTNLMQLNDVRYTWAVGLYQQMRENFWIPQRLDITQDV 73

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             + +   LTDDER      L +    +S+   NI   +   ++ PE    +  Q  +E 
Sbjct: 74  TDYAN---LTDDERYAYDGILSYLTFLDSVQTCNIP-HLKSSVTAPEVSLCMAEQISQEG 129

Query: 126 VHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           +H+ ++QYII ++   E   ++++ +R    +  +  +    Y + +  P+   +     
Sbjct: 130 MHNQSYQYIIETIIPPERRTQVYDFWRTDKVLKERCEFIASLYQKYIDHPTSENYFVALM 189

Query: 183 SRILTRSLRFLC 194
           +  L   L F  
Sbjct: 190 ADYLLEGLYFYN 201


>gi|218249013|ref|YP_002374384.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8801]
 gi|218169491|gb|ACK68228.1| Ribonucleoside-diphosphate reductase [Cyanothece sp. PCC 8801]
          Length = 344

 Score =  150 bits (380), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 83/192 (43%), Gaps = 8/192 (4%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           ++PI        ++++ +    + ++ QL  ++Y WA   Y     N W+P  + +  D+
Sbjct: 3   INPIFNPSGDDAIENRSIWFGNTTNLMQLNDVRYTWAVGLYQQMRENFWIPQRLDITQDV 62

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             + +   LTDDER      L +    +S+   NI   +   ++ PE    +  Q  +E 
Sbjct: 63  TDYAN---LTDDERYAYDGILSYLTFLDSVQTCNIP-HLKSSVTAPEVSLCMAEQISQEG 118

Query: 126 VHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           +H+ ++QYII ++   E   ++++ +R    +  +  +    Y + +  P+   +     
Sbjct: 119 MHNQSYQYIIETIIPPERRTQVYDFWRTDKVLKERCEFIASLYQKYIDIPTSENYFVALM 178

Query: 183 SRILTRSLRFLC 194
           +  L   L F  
Sbjct: 179 ADYLLEGLYFYN 190


>gi|160947324|ref|ZP_02094491.1| hypothetical protein PEPMIC_01258 [Parvimonas micra ATCC 33270]
 gi|158446458|gb|EDP23453.1| hypothetical protein PEPMIC_01258 [Parvimonas micra ATCC 33270]
          Length = 349

 Score =  150 bits (380), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 40/190 (21%), Positives = 84/190 (44%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
             +      + +  ++M+N  + ++N    +KY W  E Y +A NN W+P E+ +  DL 
Sbjct: 6   KALFNENGDIELSKRKMINGNTTNLNDFNNVKYTWTTEWYRNAMNNFWIPEEINLFQDLK 65

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +K    L + E+    + L F    +S+   N+   I  +++  E    L  QA++EA+
Sbjct: 66  DYK---ILDEYEKTAFDKVLSFLIFLDSIQTANLP-YIGEYITANEINLCLTIQAYQEAI 121

Query: 127 HSHTFQYIITSLGLDEGE--LFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRS 183
           HS ++ Y++ S+   E    +   +R+   + A+  +    Y +   +   +   K   +
Sbjct: 122 HSQSYGYMLDSICSPEERTNILYQWRDDEHLLARNKFIGDLYNEFQVNKDPYSLVKTMVA 181

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 182 NYILEGVYFY 191


>gi|294794440|ref|ZP_06759576.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           3_1_44]
 gi|294454770|gb|EFG23143.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           3_1_44]
          Length = 342

 Score =  150 bits (380), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 80/174 (45%), Gaps = 8/174 (4%)

Query: 24  MLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMI 82
           M+   + ++ +   +KY WA + Y +  NN W+P E+ + +D+   K    LTD ER   
Sbjct: 18  MIGGNTTNLREWNRIKYDWANQMYRTMLNNFWIPEEISLNEDV---KQFPYLTDYERRAF 74

Query: 83  KRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD- 141
            + + F    +S+ + N+   + R+++  E    L  QAF+E +H+ ++ YI+ ++    
Sbjct: 75  DKIIAFLNFLDSIQSENLP-NLSRYITASEVASLLNIQAFQEEIHAQSYSYILDTVTNPI 133

Query: 142 -EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
              ++++ +R   ++  +  +    Y +    PS         +  +   + F 
Sbjct: 134 TRDKIYDEWRTDKTLLERNRFIADAYQRFSDDPSEANLIHTIIANYILEGIYFY 187


>gi|303228685|ref|ZP_07315510.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           atypica ACS-134-V-Col7a]
 gi|303230495|ref|ZP_07317254.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           atypica ACS-049-V-Sch6]
 gi|302514861|gb|EFL56844.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           atypica ACS-049-V-Sch6]
 gi|302516665|gb|EFL58582.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           atypica ACS-134-V-Col7a]
          Length = 342

 Score =  150 bits (380), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 80/174 (45%), Gaps = 8/174 (4%)

Query: 24  MLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMI 82
           M+   + ++ +   +KY WA + Y +  NN W+P E+ + +D+   K    LTD ER   
Sbjct: 18  MIGGNTTNLREWNRIKYDWANQMYRTMLNNFWIPEEISLNEDV---KQFPYLTDYERRAF 74

Query: 83  KRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD- 141
            + + F    +S+ + N+   + R+++  E    L  QAF+E +H+ ++ YI+ ++    
Sbjct: 75  DKIIAFLNFLDSIQSENLP-NLSRYITASEVASLLNIQAFQEEIHAQSYSYILDTVTNPI 133

Query: 142 -EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
              ++++ +R   ++  +  +    Y +    PS         +  +   + F 
Sbjct: 134 TRDKIYDEWRTDKTLLERNRFIADAYQRFSDDPSEANLIHTIIANYILEGIYFY 187


>gi|269798663|ref|YP_003312563.1| ribonucleotide reductase [Veillonella parvula DSM 2008]
 gi|294792661|ref|ZP_06757808.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           6_1_27]
 gi|269095292|gb|ACZ25283.1| ribonucleotide reductase [Veillonella parvula DSM 2008]
 gi|294456560|gb|EFG24923.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           6_1_27]
          Length = 342

 Score =  150 bits (379), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 80/174 (45%), Gaps = 8/174 (4%)

Query: 24  MLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMI 82
           M+   + ++ +   +KY WA + Y +  NN W+P E+ + +D+   K    LTD ER   
Sbjct: 18  MIGGNTTNLREWNRIKYDWANQMYRTMLNNFWIPEEISLNEDV---KQFPYLTDYERRAF 74

Query: 83  KRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD- 141
            + + F    +S+ + N+   + R+++  E    L  QAF+E +H+ ++ YI+ ++    
Sbjct: 75  DKIIAFLNFLDSIQSENLP-NLSRYITASEVASLLNIQAFQEEIHAQSYSYILDTVTNPI 133

Query: 142 -EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
              ++++ +R   ++  +  +    Y +    PS         +  +   + F 
Sbjct: 134 TRDKIYDEWRTDKTLLERNRFIADAYQRFSDDPSEANLIHTIIANYILEGIYFY 187


>gi|87198296|ref|YP_495553.1| ribonucleotide-diphosphate reductase subunit beta [Novosphingobium
           aromaticivorans DSM 12444]
 gi|87133977|gb|ABD24719.1| Ribonucleoside-diphosphate reductase [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 351

 Score =  150 bits (379), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 65/162 (40%), Gaps = 15/162 (9%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
            N   P +Y WA+E +      HWMP EVP+ +D   W  K  +++ ER ++ +   FF 
Sbjct: 7   RNTYKPFEYPWAYEFWKRQQQIHWMPEEVPLGEDCRDWAQK--ISEHERNLLTQIFRFFT 64

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
            ++  V N       R     E +  L   +  E VH   + +++ ++G+ E E + M+ 
Sbjct: 65  QADVEVQNCYHEQYGRVFKPTEVKMMLAAFSNMETVHIAAYSHLLDTIGMPESE-YGMFL 123

Query: 151 EVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           E   + AK ++               +       I      F
Sbjct: 124 EYEELKAKHDY------------LQTFGVETDEDIARTLAMF 153


>gi|238018468|ref|ZP_04598894.1| hypothetical protein VEIDISOL_00295 [Veillonella dispar ATCC 17748]
 gi|237864939|gb|EEP66229.1| hypothetical protein VEIDISOL_00295 [Veillonella dispar ATCC 17748]
          Length = 342

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 80/174 (45%), Gaps = 8/174 (4%)

Query: 24  MLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMI 82
           M+   + ++ +   +KY WA + Y +  NN W+P E+ + +D+   K    LTD ER   
Sbjct: 18  MIGGNTTNLREWNRIKYDWANQMYRTMLNNFWIPEEISLNEDV---KQFPYLTDYERRAF 74

Query: 83  KRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD- 141
            + + F    +S+ + N+   + R+++  E    L  QAF+E +H+ ++ YI+ ++    
Sbjct: 75  DKIIAFLNFLDSIQSENLP-NLSRYITASEVASLLNIQAFQEEIHAQSYSYILDTVTNPI 133

Query: 142 -EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
              ++++ +R   ++  +  +    Y +    PS         +  +   + F 
Sbjct: 134 TRDKIYDEWRTDKTLLERNRFIADAYQRFSDDPSEANLIHTIIANYILEGIYFY 187


>gi|282849773|ref|ZP_06259157.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           parvula ATCC 17745]
 gi|282580710|gb|EFB86109.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella
           parvula ATCC 17745]
          Length = 342

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 80/174 (45%), Gaps = 8/174 (4%)

Query: 24  MLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMI 82
           M+   + ++ +   +KY WA + Y +  NN W+P E+ + +D+   K    LTD ER   
Sbjct: 18  MIGGNTTNLREWNRIKYDWANQMYRTMLNNFWIPEEISLNEDV---KQFPYLTDYERRAF 74

Query: 83  KRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD- 141
            + + F    +S+ + N+   + R+++  E    L  QAF+E +H+ ++ YI+ ++    
Sbjct: 75  DKIIAFLNFLDSIQSENLP-NLSRYITASEVASLLNIQAFQEEIHAQSYSYILDTVTNPI 133

Query: 142 -EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
              ++++ +R   ++  +  +    Y +    PS         +  +   + F 
Sbjct: 134 TRDKIYDEWRTDKTLLERNRFIADAYQRFSDDPSEANLIHTIIANYILEGIYFY 187


>gi|160881347|ref|YP_001560315.1| ribonucleoside-diphosphate reductase [Clostridium phytofermentans
           ISDg]
 gi|160430013|gb|ABX43576.1| Ribonucleoside-diphosphate reductase [Clostridium phytofermentans
           ISDg]
          Length = 342

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 83/174 (47%), Gaps = 8/174 (4%)

Query: 24  MLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMI 82
           ++   + ++ +   +KY WA   Y +  NN W+P E+ +Q+D+  +     LTD ER   
Sbjct: 18  LIKGNTTNLREWNRIKYDWARLIYRTMLNNFWIPEEISLQEDVKQF---PYLTDGERNAF 74

Query: 83  KRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD- 141
            + + F    +S+ + N+   I R+++ PE    L  QAF+E +H+ ++ YI+ ++    
Sbjct: 75  DKIIAFLNFLDSIQSENLP-NISRYITAPEVSSLLNVQAFQEEIHAQSYSYILDTVTNPV 133

Query: 142 -EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
               +++++RE   +  +  +    Y +    PS   + +   +  +   + F 
Sbjct: 134 TRDRIYDIWREDKYLLERNKFIANIYQRFSDEPSDENFVRVVFANYILEGIYFY 187


>gi|119485472|ref|ZP_01619800.1| hypothetical protein L8106_10031 [Lyngbya sp. PCC 8106]
 gi|119457228|gb|EAW38354.1| hypothetical protein L8106_10031 [Lyngbya sp. PCC 8106]
          Length = 359

 Score =  150 bits (379), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 85/192 (44%), Gaps = 8/192 (4%)

Query: 7   LSPIQAGEKRVNVDDKRML-NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           ++PI   E   +V+++ +     +++ QL  ++Y WA   Y     N W+P ++ +  D+
Sbjct: 18  INPIFNPEGNDHVENRSIWFGDTTNLMQLNDVRYPWAVGLYKQMRENFWVPEKLDITQDV 77

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             +     LT DER      L +    +S+   NI   +   ++ PE    +  Q  +EA
Sbjct: 78  VDY---GNLTTDERRAFDGILSYLTFLDSIQTCNIP-HLKSSITAPEISLCMAEQVSQEA 133

Query: 126 VHSHTFQYIITSLGLDEGE--LFNMYREVPSITAKANWALQYTQT-LSSPSFHYWNKRRR 182
           +H+ ++QY+I ++   +    ++  +R    +  +  +  ++ Q  + +P+   +     
Sbjct: 134 MHNQSYQYMIETIIPSDRRSFVYEFWRTDSVLHNRCEYIARFYQNYIDNPTSENYFVALL 193

Query: 183 SRILTRSLRFLC 194
           +  L   L F  
Sbjct: 194 ADFLLEGLYFYN 205


>gi|50843560|ref|YP_056787.1| ribonucleotide-diphosphate reductase subunit beta
           [Propionibacterium acnes KPA171202]
 gi|282854887|ref|ZP_06264221.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes J139]
 gi|289427904|ref|ZP_06429608.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes J165]
 gi|295131638|ref|YP_003582301.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes SK137]
 gi|50841162|gb|AAT83829.1| ribonucleoside-diphosphate reductase beta chain [Propionibacterium
           acnes KPA171202]
 gi|282582033|gb|EFB87416.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes J139]
 gi|289158787|gb|EFD06987.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes J165]
 gi|291376691|gb|ADE00546.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes SK137]
 gi|313771782|gb|EFS37748.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL074PA1]
 gi|313808408|gb|EFS46875.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL087PA2]
 gi|313810605|gb|EFS48319.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL083PA1]
 gi|313813765|gb|EFS51479.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL025PA1]
 gi|313818171|gb|EFS55885.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL046PA2]
 gi|313821029|gb|EFS58743.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL036PA1]
 gi|313823899|gb|EFS61613.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL036PA2]
 gi|313827161|gb|EFS64875.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL063PA1]
 gi|313831646|gb|EFS69360.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL007PA1]
 gi|313834800|gb|EFS72514.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL056PA1]
 gi|314924366|gb|EFS88197.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL001PA1]
 gi|314927054|gb|EFS90885.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL036PA3]
 gi|314961874|gb|EFT05975.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL002PA2]
 gi|314965892|gb|EFT09991.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL082PA2]
 gi|314974996|gb|EFT19091.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL053PA1]
 gi|314977908|gb|EFT22002.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL045PA1]
 gi|314979603|gb|EFT23697.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL072PA2]
 gi|314981613|gb|EFT25706.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL110PA3]
 gi|314984684|gb|EFT28776.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL005PA1]
 gi|314988338|gb|EFT32429.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL005PA2]
 gi|314990428|gb|EFT34519.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL005PA3]
 gi|315082361|gb|EFT54337.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL078PA1]
 gi|315083809|gb|EFT55785.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL027PA2]
 gi|315087306|gb|EFT59282.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL002PA3]
 gi|315089724|gb|EFT61700.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL072PA1]
 gi|315092253|gb|EFT64229.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL110PA4]
 gi|315094826|gb|EFT66802.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL060PA1]
 gi|315095599|gb|EFT67575.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL038PA1]
 gi|315104692|gb|EFT76668.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL050PA2]
 gi|315107754|gb|EFT79730.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL030PA1]
 gi|327326613|gb|EGE68401.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL096PA3]
 gi|327332877|gb|EGE74609.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL096PA2]
 gi|327335278|gb|EGE76988.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL097PA1]
 gi|327447704|gb|EGE94358.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL043PA2]
 gi|327448579|gb|EGE95233.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL043PA1]
 gi|327449568|gb|EGE96222.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL013PA2]
 gi|328757395|gb|EGF71011.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL020PA1]
 gi|328762002|gb|EGF75508.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL099PA1]
          Length = 328

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 77/159 (48%), Gaps = 3/159 (1%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+ Y WA++ Y  A  N W P E+ + +DLA +     +T DE   +   + +F  +E
Sbjct: 13  LKPVTYSWAYDLYNQAVANTWFPNEIQLDEDLADFA---RMTPDEHHALTHLMSYFNPNE 69

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVP 153
            LV   +   +Y +++  EC  YL +Q +EEA H   F+Y++ +  +D  E +  +  VP
Sbjct: 70  LLVNKALAFGVYPYVNAAECHLYLAKQMWEEANHCMAFEYVLETFPIDRDEAYRSHIHVP 129

Query: 154 SITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           S+  K  + + + + ++  +        +   +   + +
Sbjct: 130 SMARKEAFEVAFIKRMTEQTLDITTVEGKQDFVRNLIAY 168


>gi|327328671|gb|EGE70431.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL103PA1]
          Length = 328

 Score =  149 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 77/159 (48%), Gaps = 3/159 (1%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+ Y WA++ Y  A  N W P E+ + +DLA +     +T DE   +   + +F  +E
Sbjct: 13  LKPVTYSWAYDLYNQAVANTWFPNEIQLDEDLADFA---RMTPDEHHALTHLMSYFNPNE 69

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVP 153
            LV   +   +Y +++  EC  YL +Q +EEA H   F+Y++ +  +D  E +  +  VP
Sbjct: 70  LLVNKALAFGVYPYVNAAECHLYLAKQMWEEANHCMAFEYVLETFPIDRDEAYRSHIHVP 129

Query: 154 SITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           S+  K  + + + + ++  +        +   +   + +
Sbjct: 130 SMARKEAFEVAFIKRMTEQTLDITTVEGKQDFVRNLIAY 168


>gi|83859670|ref|ZP_00953190.1| ribonucleotide-diphosphate reductase beta subunit [Oceanicaulis
           alexandrii HTCC2633]
 gi|83852029|gb|EAP89883.1| ribonucleotide-diphosphate reductase beta subunit [Oceanicaulis
           alexandrii HTCC2633]
          Length = 348

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 38/160 (23%), Positives = 67/160 (41%), Gaps = 15/160 (9%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
              P +Y WA++ +      HW+P EVP+ +D   W +K  LTD ER ++ +   FF  S
Sbjct: 17  TYKPFRYPWAYDFWKVQSQVHWLPEEVPLGEDCKDWATK--LTDKERNLLTQIFRFFTQS 74

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
           +  V  N +          E R  L   +  E +H   +  ++ ++G+ + E F+ + E 
Sbjct: 75  DVEVGANYMENYMPLFKPVEVRMMLAAFSNMETIHIAAYALLLETIGMPDTE-FSAFMEY 133

Query: 153 PSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             + AK ++  ++                   ILT    F
Sbjct: 134 EEMAAKHDYLGKF------------GCETDRDILTSMAVF 161


>gi|85375147|ref|YP_459209.1| ribonucleotide-diphosphate reductase subunit beta [Erythrobacter
           litoralis HTCC2594]
 gi|84788230|gb|ABC64412.1| ribonucleotide reductase beta subunit [Erythrobacter litoralis
           HTCC2594]
          Length = 356

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 63/162 (38%), Gaps = 15/162 (9%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
                P +Y WA++ +      HWMP EVP+ +D   W  K  +T+ ER ++ +   FF 
Sbjct: 7   RKTYKPFEYPWAYDFWKRQQQIHWMPEEVPLGEDCRDWAQK--ITEHERNLLTQIFRFFT 64

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
            ++  V +       R     E +  L   +  E VH   + +++ ++G+ E E ++ + 
Sbjct: 65  QADVEVQDCYHDKYGRVFKPTEIKMMLTAFSNMETVHIAAYSHLLDTIGMPESE-YSAFL 123

Query: 151 EVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           E   +  K ++               +       I      F
Sbjct: 124 EYEEMKDKHDY------------LQLFGVDTDEDIARTLAVF 153


>gi|307151334|ref|YP_003886718.1| ribonucleotide reductase [Cyanothece sp. PCC 7822]
 gi|306981562|gb|ADN13443.1| ribonucleotide reductase [Cyanothece sp. PCC 7822]
          Length = 355

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 85/198 (42%), Gaps = 8/198 (4%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEV 59
           ++    ++PI        ++++ M     +++ QL  ++Y WA   Y     N W+P  +
Sbjct: 8   LSERMPITPIFNPNGDDRIENRTMWFGNITNLMQLNDVRYTWAVGLYKQMRENFWIPERL 67

Query: 60  PMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLR 119
            +  D+  +     LT+DER   +  L +    +S+   NI   +   ++ PE    +  
Sbjct: 68  DITQDVTDY---WNLTEDERYAFEGILSYLTFLDSVQTCNIP-HLKASVTAPEISLCMAE 123

Query: 120 QAFEEAVHSHTFQYIITSLGL--DEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHY 176
           Q  +E +H+  +QY+I ++       E+++ +R    + A+  +    Y + ++ P+   
Sbjct: 124 QISQEGMHNQAYQYMIETIIPLERRSEVYDFWRTDKVLKARCEFIAGLYQKYINQPNIDN 183

Query: 177 WNKRRRSRILTRSLRFLC 194
           +     +  L   L F  
Sbjct: 184 YFTALMADYLLEGLYFYN 201


>gi|224372455|ref|YP_002606827.1| ribonucleotide-diphosphate reductase subunit beta [Nautilia
           profundicola AmH]
 gi|223589410|gb|ACM93146.1| ribonucleoside-diphosphate reductase, beta subunit [Nautilia
           profundicola AmH]
          Length = 346

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 70/173 (40%), Gaps = 7/173 (4%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
                +  L  L Y WA+  +     N W P EV + +D   ++    L   E+ M  + 
Sbjct: 24  GCTEGIINLNKLSYPWAYNLWEMMLANTWFPREVDLTEDARQYRQ---LLPAEKRMYDKA 80

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL 145
           L      +S+  NN    +   ++ PE    ++RQA+EEA+HS ++  ++ S+ L+  E+
Sbjct: 81  LSQLIFMDSIQTNNTPDHVNPWITAPEVNMCIVRQAYEEALHSQSYAVMVDSISLNTDEI 140

Query: 146 FNMYREVPSITAKANWA----LQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           + M+R   ++  K  +      ++     +           +      + F  
Sbjct: 141 YEMWRVDANLRKKNEFIGNVYEEWGTKALNGDDEAKIYMIVANQCLEGIYFYN 193


>gi|168186576|ref|ZP_02621211.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum C str. Eklund]
 gi|169295422|gb|EDS77555.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum C str. Eklund]
          Length = 342

 Score =  149 bits (377), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 85/171 (49%), Gaps = 7/171 (4%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
            + +++ +   +KY WA E Y +  NN W+P E+ + +D+   K  + LTD ER    + 
Sbjct: 21  GSTTNLREWNRIKYNWANELYRNMLNNFWIPEEISLNEDV---KQFSYLTDGERNAFDKI 77

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD--EG 143
           + F    +S+ + N+   I R+++ PE    L  QAF+E +H+ ++ YI+ ++       
Sbjct: 78  ISFLNFLDSIQSENLP-NISRYITAPEVSSILNIQAFQEEIHAQSYSYILDTVTNPITRD 136

Query: 144 ELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           ++++ +RE  ++  +  +    Y +   +P+   + +   +  +   + F 
Sbjct: 137 KIYDQWREDKNLLERNKFIAGIYQRFNENPTTENFLRTIMANYILEGIYFY 187


>gi|254293199|ref|YP_003059222.1| ribonucleotide-diphosphate reductase subunit beta [Hirschia baltica
           ATCC 49814]
 gi|254041730|gb|ACT58525.1| Ribonucleoside-diphosphate reductase [Hirschia baltica ATCC 49814]
          Length = 345

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 3/137 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P +Y WA++ +      HW+P EVP+ +D   W  K  L D ER ++ +   FF  S+  
Sbjct: 21  PFRYPWAYDFWKIQQQVHWVPEEVPLGEDCKDWAGK--LNDKERNLLTQIFRFFTQSDVE 78

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V  N +          E R  L   +  E VH   +  ++ ++G+ + E F+ + E   +
Sbjct: 79  VGANYMENYMPLFKPVEVRMMLAAFSNMETVHIAAYALLLETIGMPDSE-FSAFMEYEEM 137

Query: 156 TAKANWALQYTQTLSSP 172
            AK ++  +++    + 
Sbjct: 138 AAKHDYLGKFSVDTEAD 154


>gi|313793687|gb|EFS41718.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL110PA1]
 gi|327456018|gb|EGF02673.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL092PA1]
          Length = 328

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 76/159 (47%), Gaps = 3/159 (1%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+ Y WA++ Y  A  N W P E+ + +DLA +     +T DE   +   + +F  +E
Sbjct: 13  LKPVTYSWAYDLYNQAVANTWFPNEIQLDEDLADFA---RMTPDEHHALTHLMSYFNPNE 69

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVP 153
            LV   +   +Y +++  EC  YL +Q +EEA H   F+Y++ +  +D  E +  +  VP
Sbjct: 70  LLVNKALAFGVYPYVNAAECHLYLAKQMWEEANHCMAFEYVLETFPIDRDEAYRSHIHVP 129

Query: 154 SITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           S+  K  + + + + ++  +            +   + +
Sbjct: 130 SMARKEAFEVAFIKRMTEQTLDITTVEGTQDFVRNLIAY 168


>gi|289425969|ref|ZP_06427716.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes SK187]
 gi|289153512|gb|EFD02226.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes SK187]
 gi|313763766|gb|EFS35130.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL013PA1]
 gi|313802998|gb|EFS44206.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL110PA2]
 gi|313816916|gb|EFS54630.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL059PA1]
 gi|313829718|gb|EFS67432.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL063PA2]
 gi|313839374|gb|EFS77088.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL086PA1]
 gi|314916474|gb|EFS80305.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL005PA4]
 gi|314932316|gb|EFS96147.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL067PA1]
 gi|314956590|gb|EFT00842.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL027PA1]
 gi|314959472|gb|EFT03574.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL002PA1]
 gi|314964864|gb|EFT08964.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL082PA1]
 gi|314968630|gb|EFT12728.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL037PA1]
 gi|315079174|gb|EFT51177.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL053PA2]
 gi|315100241|gb|EFT72217.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL059PA2]
 gi|315102565|gb|EFT74541.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL046PA1]
 gi|315109517|gb|EFT81493.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL030PA2]
 gi|327455890|gb|EGF02545.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL087PA3]
 gi|327458042|gb|EGF04697.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL083PA2]
 gi|328757204|gb|EGF70820.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL087PA1]
 gi|328757585|gb|EGF71201.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL025PA2]
          Length = 328

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 76/159 (47%), Gaps = 3/159 (1%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+ Y WA++ Y  A  N W P E+ + +DLA +     +T DE   +   + +F  +E
Sbjct: 13  LKPVTYSWAYDLYNQAVANTWFPNEIQLDEDLADFA---RMTPDEHHALTHLMSYFNPNE 69

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVP 153
            LV   +   +Y +++  EC  YL +Q +EEA H   F+Y++ +  +D  E +  +  VP
Sbjct: 70  LLVNKALAFGVYPYVNAAECHLYLAKQMWEEANHCMAFEYVLETFPIDRDEAYRSHIHVP 129

Query: 154 SITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           S+  K  + + + + ++  +            +   + +
Sbjct: 130 SMARKEAFEVAFIKRMTEQTLDITTVEGTQDFVRNLIAY 168


>gi|38683666|gb|AAR26843.1| FirrV-1-A19 [Feldmannia irregularis virus a]
          Length = 342

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 68/167 (40%), Gaps = 18/167 (10%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
           +NQ    ++   +  Y       W   E+ + +D+A W   +  ++DE+  I   L FFA
Sbjct: 32  LNQKTEFEFADVYALYKKEIACFWTVEEIDLNEDVACW---DKCSEDEQRFIGHILAFFA 88

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFN 147
           S + +V  N+ +     +  P+ R +   Q   E++H  T+  +I +   D  +   +  
Sbjct: 89  SLDQIVMENVSVNFGDEIKIPQIRSHFAMQNAIESIHGETYALLIQTYIKDPEKQVTMLR 148

Query: 148 MYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             +E+P IT KA W   +                 + +  R + F C
Sbjct: 149 SIQEMPIITKKAQWVTAWMD------------PEVASLAERLVAFTC 183


>gi|114799612|ref|YP_759103.1| ribonucleotide-diphosphate reductase subunit beta [Hyphomonas
           neptunium ATCC 15444]
 gi|114739786|gb|ABI77911.1| ribonucleoside-diphosphate reductase, beta subunit [Hyphomonas
           neptunium ATCC 15444]
          Length = 345

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 3/134 (2%)

Query: 32  NQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFAS 91
           N   P +Y WA+E +      HWMP EVP+ +D   W  K  L+D ER ++ +   FF  
Sbjct: 16  NAYKPFRYPWAYEFWKKQQQVHWMPEEVPLGEDCKDWAVK--LSDAERNLLTQIFRFFTQ 73

Query: 92  SESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYRE 151
           S+  V  N +          E    L   +  E +H   +  ++ ++G+ + E F+ + E
Sbjct: 74  SDVEVGANYMEHYMPLFKPVEVSMMLASFSNMETIHVAAYALLLETIGMPDSE-FSAFME 132

Query: 152 VPSITAKANWALQY 165
              + AK ++  Q+
Sbjct: 133 YKEMAAKHDYLGQF 146


>gi|118443949|ref|YP_878438.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           novyi NT]
 gi|118134405|gb|ABK61449.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           novyi NT]
          Length = 342

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 39/176 (22%), Positives = 86/176 (48%), Gaps = 8/176 (4%)

Query: 22  KRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           + M+N  + ++ +   +KY WA E Y +  NN W+P E+ + +D+   K    LTD ER 
Sbjct: 16  ESMINGNTTNLREWNRIKYNWANELYRTMLNNFWIPEEISLNEDV---KQFPYLTDGERN 72

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
              + + F    +S+ + N+   I R+++ PE    L  Q F+E +H+ ++ YI+ ++  
Sbjct: 73  AFDKIISFLNFLDSVQSENLP-NISRYITAPEVSSLLNVQTFQEEIHAQSYSYILDTVTN 131

Query: 141 D--EGELFNMYREVPSITAKANWALQYTQTL-SSPSFHYWNKRRRSRILTRSLRFL 193
                ++++ +RE  ++  +  +     Q+   +P+   + +   +  +   + F 
Sbjct: 132 PITRDKIYDQWREDKNLLERNKFIAGIYQSFNENPTTENFLRTIMANYILEGIYFY 187


>gi|163781846|ref|ZP_02176846.1| ribonucleotide reductase beta chain [Hydrogenivirga sp. 128-5-R1-1]
 gi|159883066|gb|EDP76570.1| ribonucleotide reductase beta chain [Hydrogenivirga sp. 128-5-R1-1]
          Length = 350

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 46/189 (24%), Positives = 94/189 (49%), Gaps = 8/189 (4%)

Query: 10  IQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSA-CNNHWMPTEVPMQDDLAL 67
           I   E   +  ++R++N   +++ +L  +KY WA++ Y +   +N W+P E+P+ +D   
Sbjct: 14  IFNPEGERDAANRRIINGNPTNIIELNNIKYPWAFDLYKTMGFSNFWIPEEIPLMEDKKQ 73

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           ++    L+D ER   +  L F  + +S   + +     R +S PE    L  Q F+E++H
Sbjct: 74  YE--RVLSDYERRAYELVLSFLIALDSFQVDMLKD-FARMISAPEVEMALTAQEFQESIH 130

Query: 128 SHTFQYIITSLG--LDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSR 184
           ++++Q+I+ S+   +   E++N +RE   +  +     + Y + +  PS   + K     
Sbjct: 131 AYSYQFILESVVDPIKADEIYNYWREDEKLKERNEVVAEVYNEFIRKPSEENFIKAVIGN 190

Query: 185 ILTRSLRFL 193
            +  SL F 
Sbjct: 191 YILESLYFY 199


>gi|126658748|ref|ZP_01729893.1| hypothetical protein CY0110_32340 [Cyanothece sp. CCY0110]
 gi|126620010|gb|EAZ90734.1| hypothetical protein CY0110_32340 [Cyanothece sp. CCY0110]
          Length = 347

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 44/190 (23%), Positives = 85/190 (44%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           SPI     + N +++ +    + +V  L   +YGWA   Y +   + W+P    +  D  
Sbjct: 9   SPIFNPTGKDNKENRHLWGGDTTNVINLNETRYGWARSIYQTMRESFWVPQRTDLSQDKL 68

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            + +   L   ER  +K  L +    +S+   NI   + R+++ PE R  L  Q  +EA+
Sbjct: 69  DYAN---LIPGERRALKGILSYLNFLDSVQVANIPE-LSRYITAPEARMCLAEQTSQEAM 124

Query: 127 HSHTFQYIITSLGL--DEGELFNMYREVPSITAKANWALQYTQTL-SSPSFHYWNKRRRS 183
           H  T+QYI  S+    ++ E+++ +++   +  +  +   Y Q L ++P+   +      
Sbjct: 125 HGETYQYITESIIPENEQHEVYDFWKQDLLLHERCEFIAGYYQNLANNPTGENYYMALIG 184

Query: 184 RILTRSLRFL 193
             L   L F 
Sbjct: 185 DYLLEGLLFY 194


>gi|313894221|ref|ZP_07827786.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           oral taxon 158 str. F0412]
 gi|313441045|gb|EFR59472.1| ribonucleoside-diphosphate reductase, beta subunit [Veillonella sp.
           oral taxon 158 str. F0412]
          Length = 342

 Score =  148 bits (375), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 80/174 (45%), Gaps = 8/174 (4%)

Query: 24  MLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMI 82
           M+   + ++ +   +KY WA + Y +  NN W+P E+ + +D+   K    LTD ER   
Sbjct: 18  MIGGNTTNLREWNRIKYDWANQMYRTMLNNFWIPEEISLNEDV---KQFPYLTDYERRAF 74

Query: 83  KRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD- 141
            + + F    +S+ + N+   + R+++  E    L  Q F+E +H+ ++ YI+ ++    
Sbjct: 75  DKIIAFLNFLDSIQSENLP-NLSRYITASEVASLLNIQTFQEEIHAQSYSYILDTVTNPI 133

Query: 142 -EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
              ++++ +R   ++ A+  +    Y +    PS         +  +   + F 
Sbjct: 134 TRDKIYDEWRTDKTLLARNRFIADAYQRFSDDPSEANLIHTIIANYILEGIYFY 187


>gi|170077010|ref|YP_001733648.1| ribonucleoside-diphosphate reductase, beta subunit [Synechococcus
           sp. PCC 7002]
 gi|169884679|gb|ACA98392.1| ribonucleoside-diphosphate reductase, beta subunit [Synechococcus
           sp. PCC 7002]
          Length = 352

 Score =  148 bits (374), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 82/191 (42%), Gaps = 8/191 (4%)

Query: 8   SPIQAGEKRVNVDDKRML-NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           +PI   +   ++  + +     +++ QL  ++Y WA   Y     N W+P ++ +  D+ 
Sbjct: 12  NPIFNPDGNDDIAHRSIWFGETTNLMQLNDVRYPWAVGLYQQMRENFWIPQKLDITQDVT 71

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            + +   LTD ER      L +    +S+   N+   I   ++ PE    +  Q  +E +
Sbjct: 72  DYHN---LTDSERRAFDGILSYLTFLDSVQTCNLP-HIKSSITAPEISLCIAEQISQEGM 127

Query: 127 HSHTFQYIITSLGLD--EGELFNMYREVPSITAKANW-ALQYTQTLSSPSFHYWNKRRRS 183
           H+ ++QY+I ++        +++ +R    +  +  + A  Y + + +P+   +     +
Sbjct: 128 HNQSYQYMIETIIPSDRRSAVYDFWRTDKVLRDRCEYIASNYQRYIDNPTPENYFTTLVA 187

Query: 184 RILTRSLRFLC 194
             L   L F  
Sbjct: 188 DYLLEGLYFYN 198


>gi|332185556|ref|ZP_08387304.1| ribonucleotide reductase, small chain family protein [Sphingomonas
           sp. S17]
 gi|332014534|gb|EGI56591.1| ribonucleotide reductase, small chain family protein [Sphingomonas
           sp. S17]
          Length = 351

 Score =  148 bits (373), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 3/133 (2%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
           Q  P +Y WA+E +      HW+P EVP+ +D   W  K  LTD ER ++ +   FF  +
Sbjct: 9   QYKPFEYPWAFEFWKRQQQLHWLPEEVPLGEDCRDWAQK--LTDHERNLLTQIFRFFTQA 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
           +  V +       R     E +  L   +  E VH   + +++ ++G+ E E +  + E 
Sbjct: 67  DVEVQDCYHEKYGRVFKPTEVKMMLTAFSNMETVHIAAYSHLLDTIGMPESE-YGAFLEY 125

Query: 153 PSITAKANWALQY 165
             +  K ++  ++
Sbjct: 126 AEMKDKHDYLQKF 138


>gi|168179222|ref|ZP_02613886.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum NCTC 2916]
 gi|182669722|gb|EDT81698.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum NCTC 2916]
          Length = 342

 Score =  148 bits (373), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 38/176 (21%), Positives = 83/176 (47%), Gaps = 8/176 (4%)

Query: 22  KRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           + M+N  + ++ +   +KY WA + Y +  NN W+P E+ + +D+   K    LTD ER 
Sbjct: 16  ESMINGNTTNLREWNRIKYSWASDFYRTMLNNFWIPEEISLNEDI---KQFPYLTDGERN 72

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
              + + F    +S+ + N+   I R+++  E    L  Q F+E +H+ ++ YI+ ++  
Sbjct: 73  AFDKIISFLNFLDSVQSENLP-NISRYITAAEVSSLLNIQTFQEEIHAQSYSYILDTVTN 131

Query: 141 D--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
                ++++ +RE   +  +  +    Y +    P  H + +   +  +   + F 
Sbjct: 132 PITRDKIYDQWREDEHLLERNKFIAGIYEKFNKEPEIHNFLRVIMANYILEGIYFY 187


>gi|94495782|ref|ZP_01302361.1| ribonucleotide reductase beta subunit [Sphingomonas sp. SKA58]
 gi|94424474|gb|EAT09496.1| ribonucleotide reductase beta subunit [Sphingomonas sp. SKA58]
          Length = 350

 Score =  148 bits (373), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 62/133 (46%), Gaps = 3/133 (2%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
              P +Y WA+E +      HW+P EVP+ +D   W  K  L+D ER ++ +   FF  +
Sbjct: 9   VYKPFEYPWAYEYWKRQQQLHWLPEEVPLGEDCRDWAQK--LSDHERNLLTQIFRFFTQA 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
           +  V +       R     E +  L   +  E VH   + +++ ++G+ E E ++ + + 
Sbjct: 67  DVEVQDCYHEKYGRVFKPTEVKMMLTAFSNMETVHIAAYSHLLDTIGMPESE-YSAFMQY 125

Query: 153 PSITAKANWALQY 165
             +  K ++  Q+
Sbjct: 126 KEMKDKHDYLQQF 138


>gi|187778605|ref|ZP_02995078.1| hypothetical protein CLOSPO_02200 [Clostridium sporogenes ATCC
           15579]
 gi|187772230|gb|EDU36032.1| hypothetical protein CLOSPO_02200 [Clostridium sporogenes ATCC
           15579]
          Length = 342

 Score =  148 bits (373), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 37/176 (21%), Positives = 83/176 (47%), Gaps = 8/176 (4%)

Query: 22  KRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           + M+N  + ++ +   +KY WA + Y +  NN W+P E+ + +D+   K    LTD ER 
Sbjct: 16  ESMINGNTTNLREWNRIKYSWASDFYRTMLNNFWIPEEISLNEDV---KQFPYLTDGERN 72

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
              + + F    +S+ + N+   I R+++  E    L  Q F+E +H+ ++ YI+ ++  
Sbjct: 73  AFDKIISFLNFLDSVQSENLP-NISRYITAAEVSSLLNIQTFQEEIHAQSYSYILDTVTN 131

Query: 141 D--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
                ++++ +RE   +  +  +    Y +    P  + + +   +  +   + F 
Sbjct: 132 PITRDKIYDQWREDEQLLERNKFIAGIYEKFNKEPEIYNFLRVIMANYILEGIYFY 187


>gi|326386063|ref|ZP_08207687.1| ribonucleotide-diphosphate reductase subunit beta [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326209288|gb|EGD60081.1| ribonucleotide-diphosphate reductase subunit beta [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 351

 Score =  148 bits (373), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 3/132 (2%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
                P +Y WA+E +      HWMP EVP+ +D   W  K  ++D ER ++ +   FF 
Sbjct: 7   RKTYKPFEYPWAYEFWKRQQQVHWMPEEVPLGEDCRDWAQK--ISDHERNLLTQIFRFFT 64

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
            ++  V +       R     E +  L   +  E +H   + +++ ++G+ E E + M+ 
Sbjct: 65  QADVEVQDCYHEKYGRVFKPTEVKMMLAAFSNMETIHIAAYSHLLDTIGMPESE-YGMFL 123

Query: 151 EVPSITAKANWA 162
           E   + AK ++ 
Sbjct: 124 EYEEMKAKHDYM 135


>gi|296116311|ref|ZP_06834927.1| ribonucleotide-diphosphate reductase subunit beta
           [Gluconacetobacter hansenii ATCC 23769]
 gi|295977130|gb|EFG83892.1| ribonucleotide-diphosphate reductase subunit beta
           [Gluconacetobacter hansenii ATCC 23769]
          Length = 334

 Score =  148 bits (373), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 64/133 (48%), Gaps = 3/133 (2%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
              P +Y WA++ +L+    HW+P EVP+ DD+  W     LT+ ER ++ +   FF  S
Sbjct: 24  VYKPFRYPWAYDAWLTQQQVHWLPEEVPLADDVKDWH--RSLTESERHLVTQIFRFFTQS 81

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
           +  V N  +    +     E    L   +  E +H   + +++ ++G+ E E ++ + + 
Sbjct: 82  DVEVNNCYMKHYSQVFKPTEVLMMLSAFSNIETIHIAAYSHLLDTIGMPESE-YSAFLKY 140

Query: 153 PSITAKANWALQY 165
             +  K ++  ++
Sbjct: 141 KEMKDKYDYMQEF 153


>gi|170761039|ref|YP_001788131.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A3 str. Loch Maree]
 gi|169408028|gb|ACA56439.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A3 str. Loch Maree]
          Length = 342

 Score =  148 bits (373), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 38/176 (21%), Positives = 83/176 (47%), Gaps = 8/176 (4%)

Query: 22  KRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           + M+N  + ++ +   +KY WA + Y +  NN W+P E+ + +D+   K    LTD ER 
Sbjct: 16  ESMINGNTTNLREWNRIKYSWASDFYRTMLNNFWIPEEISLNEDI---KQFPYLTDGERN 72

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
              + + F    +S+ + N+   I R+++  E    L  Q F+E +H+ ++ YI+ ++  
Sbjct: 73  AFDKIISFLNFLDSVQSENLP-NISRYITAAEVSSLLNIQTFQEEIHAQSYSYILDTVTN 131

Query: 141 D--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
                ++++ +RE   +  +  +    Y +    P  H + +   +  +   + F 
Sbjct: 132 PITRDKIYDQWREDEHLLERNKFIAGIYEKFNKEPEIHNFLRAIMANYILEGIYFY 187


>gi|294013210|ref|YP_003546670.1| ribonucleoside-diphosphate reductase beta chain [Sphingobium
           japonicum UT26S]
 gi|292676540|dbj|BAI98058.1| ribonucleoside-diphosphate reductase beta chain [Sphingobium
           japonicum UT26S]
          Length = 351

 Score =  147 bits (372), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 62/133 (46%), Gaps = 3/133 (2%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
              P +Y WA+E +      HW+P EVP+ +D   W  K  L+D ER ++ +   FF  +
Sbjct: 9   VYKPFEYPWAYEFWKRQQQLHWLPEEVPLGEDCRDWAQK--LSDHERNLLTQIFRFFTQA 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
           +  V +       R     E +  L   +  E VH   + +++ ++G+ E E ++ + + 
Sbjct: 67  DVEVQDCYHEKYGRVFKPTEIKMMLTAFSNMETVHIAAYSHLLDTIGMPESE-YSAFMQY 125

Query: 153 PSITAKANWALQY 165
             +  K ++  Q+
Sbjct: 126 KEMKDKHDYLQQF 138


>gi|13242599|ref|NP_077613.1| EsV-1-128 [Ectocarpus siliculosus virus 1]
 gi|13177402|gb|AAK14546.1|AF204951_128 EsV-1-128 [Ectocarpus siliculosus virus 1]
          Length = 419

 Score =  147 bits (372), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 45/204 (22%), Positives = 79/204 (38%), Gaps = 25/204 (12%)

Query: 1   MANNTGLSPIQAGEKRVN---VDDKRMLNARSDVNQLLPLK----YGWAWEKYLSACNNH 53
           +   T   P +  +K ++   V+   +     D   L   K    Y   ++ Y       
Sbjct: 72  LKRTTIHLPTEFRKKEMDGEIVEPMCVEEEDFDRFILFNGKTEHEYADVFQLYKKQTALF 131

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W+  E+ +  D   W+     + DE+  +K  L FFAS + +V  NI L     +  P+ 
Sbjct: 132 WVVEEIDLSGDSKDWEDA---SSDEKHFLKLVLAFFASLDQIVMENIGLNFKNEIVIPQI 188

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLS 170
           RQ+   Q   EAVH  ++  +I +   D  E   +    + +P I  KA WA ++    +
Sbjct: 189 RQHFAIQEATEAVHGESYSLLIQTYFRDTEEQRHVMRSIQTMPIIEKKALWAEKWMNPET 248

Query: 171 SPSFHYWNKRRRSRILTRSLRFLC 194
                       + +  R + F C
Sbjct: 249 ------------ASLAERLVGFTC 260


>gi|314918862|gb|EFS82693.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL050PA1]
 gi|314921071|gb|EFS84902.1| ribonucleoside-diphosphate reductase, beta subunit
           [Propionibacterium acnes HL050PA3]
          Length = 328

 Score =  147 bits (372), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 76/159 (47%), Gaps = 3/159 (1%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+ Y WA++ Y  A  N W P E+ + +DLA +     +T DE   +   + +F  +E
Sbjct: 13  LKPVTYSWAYDLYNQAVANTWFPNEIQLDEDLADFA---RMTPDEHHALTHLMSYFNPNE 69

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVP 153
            LV   +   +Y +++  EC  YL +Q +EEA H   F+Y++ +  +D  E +  +  VP
Sbjct: 70  LLVNKALAFGVYPYVNAAECHLYLAKQMWEEANHCMAFEYVLETFPIDRDEAYRSHIHVP 129

Query: 154 SITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           S+  K  + + + + ++  +            +   + +
Sbjct: 130 SMARKEAFEVAFIKRMTEQTLDITTVEGTRDFVRNLIAY 168


>gi|85710107|ref|ZP_01041172.1| ribonucleotide reductase beta subunit [Erythrobacter sp. NAP1]
 gi|85688817|gb|EAQ28821.1| ribonucleotide reductase beta subunit [Erythrobacter sp. NAP1]
          Length = 346

 Score =  147 bits (372), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 3/135 (2%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
            N   P +Y WA+E +      HWMP EVP+ +D   W     LT+ ER ++ +   FF 
Sbjct: 7   RNTYKPFEYPWAYEFWKRQQQIHWMPEEVPLGEDCRDWAQ--NLTEHERNLLTQIFRFFT 64

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
            ++  V +       R     E +  L   +  E VH   + +++ ++G+ E E ++ + 
Sbjct: 65  QADVEVQDCYHDKYGRVFKPTEIKMMLAAFSNMETVHIAAYSHLLDTIGMPESE-YSAFL 123

Query: 151 EVPSITAKANWALQY 165
           +   +  K N+  Q+
Sbjct: 124 DYEEMADKHNYMHQF 138


>gi|168184457|ref|ZP_02619121.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum Bf]
 gi|237796249|ref|YP_002863801.1| ribonucleoside-diphosphate reductase subunit beta [Clostridium
           botulinum Ba4 str. 657]
 gi|182672468|gb|EDT84429.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum Bf]
 gi|229263158|gb|ACQ54191.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum Ba4 str. 657]
          Length = 342

 Score =  147 bits (372), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 37/176 (21%), Positives = 83/176 (47%), Gaps = 8/176 (4%)

Query: 22  KRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           + M+N  + ++ +   +KY WA + Y +  NN W+P E+ + +D+  +     LTD ER 
Sbjct: 16  ESMINGNTTNLREWNRIKYSWASDFYRTMLNNFWIPEEISLNEDIKQF---PYLTDGERN 72

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
              + + F    +S+ + N+   I R+++  E    L  Q F+E +H+ ++ YI+ ++  
Sbjct: 73  AFDKIISFLNFLDSVQSENLP-NISRYITAAEVSSLLNIQTFQEEIHAQSYSYILDTVTN 131

Query: 141 D--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
                ++++ +RE   +  +  +    Y +    P  H + +   +  +   + F 
Sbjct: 132 PITRDKIYDQWREDEHLLERNKFIAGIYEKFNKEPEIHNFLRVIMANYILEGIYFY 187


>gi|226950223|ref|YP_002805314.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A2 str. Kyoto]
 gi|226843961|gb|ACO86627.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A2 str. Kyoto]
          Length = 342

 Score =  147 bits (372), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 37/176 (21%), Positives = 83/176 (47%), Gaps = 8/176 (4%)

Query: 22  KRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           + M+N  + ++ +   +KY WA + Y +  NN W+P E+ + +D+  +     LTD ER 
Sbjct: 16  ESMINGNTTNLREWNRIKYSWASDFYRTMLNNFWIPEEISLNEDIKQF---PYLTDGERN 72

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
              + + F    +S+ + N+   I R+++  E    L  Q F+E +H+ ++ YI+ ++  
Sbjct: 73  AFDKIISFLNFLDSVQSENLP-NISRYITAAEVSSLLNIQTFQEEIHAQSYSYILDTVTN 131

Query: 141 D--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
                ++++ +RE   +  +  +    Y +    P  H + +   +  +   + F 
Sbjct: 132 PITRDKIYDQWREDEHLLERNKFIAGIYEKFNKEPEIHNFLRVIMANYILEGIYFY 187


>gi|307295356|ref|ZP_07575195.1| Ribonucleoside-diphosphate reductase [Sphingobium chlorophenolicum
           L-1]
 gi|306878859|gb|EFN10078.1| Ribonucleoside-diphosphate reductase [Sphingobium chlorophenolicum
           L-1]
          Length = 351

 Score =  147 bits (372), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 62/133 (46%), Gaps = 3/133 (2%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
              P +Y WA+E +      HW+P EVP+ +D   W  K  L+D ER ++ +   FF  +
Sbjct: 9   VYKPFEYPWAYEYWKRQQQLHWLPEEVPLGEDCRDWAQK--LSDHERNLLTQIFRFFTQA 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
           +  V +       R     E +  L   +  E VH   + +++ ++G+ E E ++ + + 
Sbjct: 67  DVEVQDCYHDKYGRVFKPTEIKMMLTAFSNMETVHIAAYSHLLDTIGMPETE-YSAFMQY 125

Query: 153 PSITAKANWALQY 165
             +  K ++  Q+
Sbjct: 126 KEMKDKHDYLAQF 138


>gi|153940168|ref|YP_001392091.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum F str. Langeland]
 gi|170756361|ref|YP_001782419.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum B1 str. Okra]
 gi|152936064|gb|ABS41562.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum F str. Langeland]
 gi|169121573|gb|ACA45409.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum B1 str. Okra]
 gi|322807123|emb|CBZ04697.1| ribonucleotide reductase of class Ia (aerobic),beta subunit
           [Clostridium botulinum H04402 065]
          Length = 342

 Score =  147 bits (371), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 37/176 (21%), Positives = 83/176 (47%), Gaps = 8/176 (4%)

Query: 22  KRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           + M+N  + ++ +   +KY WA + Y +  NN W+P E+ + +D+  +     LTD ER 
Sbjct: 16  ESMINGNTTNLREWNRIKYSWASDFYRTMLNNFWIPEEISLNEDIKQF---PYLTDGERN 72

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
              + + F    +S+ + N+   I R+++  E    L  Q F+E +H+ ++ YI+ ++  
Sbjct: 73  AFDKIISFLNFLDSVQSENLP-NISRYITAAEVSSLLNIQTFQEEIHAQSYSYILDTVTN 131

Query: 141 D--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
                ++++ +RE   +  +  +    Y +    P  H + +   +  +   + F 
Sbjct: 132 PITRDKIYDQWREDEHLLERNKFIAGIYEKFNKEPEIHNFLRAIMANYILEGIYFY 187


>gi|209966751|ref|YP_002299666.1| ribonucleotide-diphosphate reductase subunit beta [Rhodospirillum
           centenum SW]
 gi|209960217|gb|ACJ00854.1| ribonucleoside-diphosphate reductase, beta subunit [Rhodospirillum
           centenum SW]
          Length = 322

 Score =  147 bits (371), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 68/151 (45%), Gaps = 7/151 (4%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
             +L          P +Y WA+E +L+    HW+P EVP+ DD+  W+ K  LT+ ER +
Sbjct: 3   SPLLTPNP---VYKPFRYPWAYEAWLTQQRIHWLPEEVPLADDVKDWRQK--LTEAERNL 57

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           + +   FF  ++  V N  +    R     E    L   +  E VH   + +++ ++G+ 
Sbjct: 58  LTQIFRFFTQADVEVNNCYMRHYSRVFQPTEVCMMLAAFSAMETVHIAAYSHLLDTIGMP 117

Query: 142 EGELFNMYREVPSITAKANWALQY-TQTLSS 171
           E E ++ +     +  K ++   +   +L  
Sbjct: 118 EIE-YSAFLRYKEMKDKYDYMQGFNVDSLED 147


>gi|148380773|ref|YP_001255314.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A str. ATCC 3502]
 gi|153932443|ref|YP_001385057.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A str. ATCC 19397]
 gi|153934989|ref|YP_001388527.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A str. Hall]
 gi|148290257|emb|CAL84376.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           botulinum A str. ATCC 3502]
 gi|152928487|gb|ABS33987.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A str. ATCC 19397]
 gi|152930903|gb|ABS36402.1| ribonucleoside-diphosphate reductase, beta subunit [Clostridium
           botulinum A str. Hall]
          Length = 342

 Score =  147 bits (371), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 37/176 (21%), Positives = 83/176 (47%), Gaps = 8/176 (4%)

Query: 22  KRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           + M+N  + ++ +   +KY WA + Y +  NN W+P E+ + +D+  +     LTD ER 
Sbjct: 16  ESMINGNTTNLREWNRIKYSWASDFYRTMLNNFWIPEEISLNEDIKQF---PYLTDGERN 72

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
              + + F    +S+ + N+   I R+++  E    L  Q F+E +H+ ++ YI+ ++  
Sbjct: 73  AFDKIISFLNFLDSVQSENLP-NISRYITAAEVSSLLNIQTFQEEIHAQSYSYILDTVTN 131

Query: 141 D--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
                ++++ +RE   +  +  +    Y +    P  H + +   +  +   + F 
Sbjct: 132 PITRDKIYDQWREDEHLLERNKFIAGIYEKFNKEPEIHNFLRAIMANYILEGIYFY 187


>gi|6321619|ref|NP_011696.1| Rnr4p [Saccharomyces cerevisiae S288c]
 gi|1710402|sp|P49723|RIR4_YEAST RecName: Full=Ribonucleoside-diphosphate reductase small chain 2;
           AltName: Full=Ribonucleotide reductase R2 subunit 2;
           AltName: Full=Ribonucleotide reductase small subunit 2
 gi|15826570|pdb|1JK0|B Chain B, Ribonucleotide Reductase Y2y4 Heterodimer
 gi|52695527|pdb|1SMS|A Chain A, Structure Of The Ribonucleotide Reductase Rnr4 Homodimer
           From Saccharomyces Cerevisiae
 gi|52695528|pdb|1SMS|B Chain B, Structure Of The Ribonucleotide Reductase Rnr4 Homodimer
           From Saccharomyces Cerevisiae
 gi|915546|gb|AAB72236.1| Rnr4p [Saccharomyces cerevisiae]
 gi|1323319|emb|CAA97206.1| RNR4 [Saccharomyces cerevisiae]
 gi|285812375|tpg|DAA08275.1| TPA: Rnr4p [Saccharomyces cerevisiae S288c]
 gi|323304781|gb|EGA58540.1| Rnr4p [Saccharomyces cerevisiae FostersB]
 gi|323308943|gb|EGA62174.1| Rnr4p [Saccharomyces cerevisiae FostersO]
          Length = 345

 Score =  147 bits (371), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 70/187 (37%), Gaps = 17/187 (9%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
           +  + +    D+ +L   S    + P+KY   W  Y     + W   E+ +  D   ++ 
Sbjct: 14  ERHDMKEAEKDEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQK 73

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              LTDD++  I   L    SS++LV   ++      L NPE + +   Q   E ++S  
Sbjct: 74  ---LTDDQKTYIGNLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEV 130

Query: 131 FQYIITSLGLDEGEL--FNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
           +  ++ +   D   +  F     +P +  KA +  ++                 S    R
Sbjct: 131 YSMMVDAFFKDPKNIPLFKEIANLPEVKHKAAFIERWISN------------DDSLYAER 178

Query: 189 SLRFLCR 195
            + F  +
Sbjct: 179 LVAFAAK 185


>gi|255323570|ref|ZP_05364700.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           showae RM3277]
 gi|255299284|gb|EET78571.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           showae RM3277]
          Length = 340

 Score =  147 bits (371), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 73/186 (39%), Gaps = 4/186 (2%)

Query: 10  IQAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           I       N+ D+R+ N     +      KY WA + +     N W P EV   DD+  +
Sbjct: 6   IYNPSSNENLTDRRVFNGNPHGILNFTKAKYQWALKLWDLMEANTWFPKEVDTTDDVRDY 65

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
                LT  E+ M         S +S   NN+   I  +++ PE    L RQA+EEA HS
Sbjct: 66  AY--NLTQAEKRMYDLVWSQLISMDSFQTNNLADNINPYITAPEINACLARQAYEEANHS 123

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILT 187
            ++  ++ ++  +   ++ M +    +  K ++    Y +     +         +  + 
Sbjct: 124 KSYAVMVEAICDNTDLIYEMEKHDEVLREKNDYISSVYEELAGEVTDEKLLLAMVANQIL 183

Query: 188 RSLRFL 193
             + F 
Sbjct: 184 EGIYFY 189


>gi|83592781|ref|YP_426533.1| ribonucleotide-diphosphate reductase subunit beta [Rhodospirillum
           rubrum ATCC 11170]
 gi|83575695|gb|ABC22246.1| Ribonucleoside-diphosphate reductase [Rhodospirillum rubrum ATCC
           11170]
          Length = 358

 Score =  147 bits (371), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 64/128 (50%), Gaps = 2/128 (1%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           +Y WA+E +      HWM  EVP+ +DL  W S + ++D ER ++ +   FF  S+  V+
Sbjct: 30  RYPWAYEFWKKQQQVHWMGEEVPLGEDLKDWAS-DRVSDQERNLLTQIFRFFTQSDVEVS 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
           +N +          E +  +      E +H   +  ++T+LG+   E F+ +R+  ++  
Sbjct: 89  DNYLKRYMPIFQPLEIQMMMAAFTNMETIHIDAYALLLTTLGMPRTE-FSAFRDYAAMRD 147

Query: 158 KANWALQY 165
           KA++   +
Sbjct: 148 KADYMHTF 155


>gi|299472857|emb|CBN80426.1| EsV-1-128 [Ectocarpus siliculosus]
          Length = 419

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 70/183 (38%), Gaps = 22/183 (12%)

Query: 19  VDDKRMLNARSDVNQLLPLK----YGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           V+   +     D   L   K    Y   ++ Y       W+  E+ M  D   W      
Sbjct: 93  VEPMCVEEEDFDRFILFNGKTEHEYADVFQLYKKQTALFWVVEEIDMSGDSKDWDDA--- 149

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           + DE+  +K  L FFAS + +V  NI L     +  P+ RQ+   Q   EAVH  ++  +
Sbjct: 150 SSDEKHFLKLVLAFFASLDQIVMENIGLNFKNEIVIPQIRQHFAIQEATEAVHGESYSLL 209

Query: 135 ITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           I +   D  E   +    + +P I  KA WA ++    +            + +  R + 
Sbjct: 210 IQTYFRDTEEQRHVMRSIQTMPIIEKKALWAEKWMNPET------------ASLAERLVG 257

Query: 192 FLC 194
           F C
Sbjct: 258 FTC 260


>gi|149185037|ref|ZP_01863354.1| ribonucleotide reductase beta subunit [Erythrobacter sp. SD-21]
 gi|148831148|gb|EDL49582.1| ribonucleotide reductase beta subunit [Erythrobacter sp. SD-21]
          Length = 352

 Score =  146 bits (370), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 3/135 (2%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
                P +Y WA+E +      HWMP EVP+ +D   W  K  LT+ ER ++ +   FF 
Sbjct: 7   RKTYKPFEYPWAYEFWKRQQQIHWMPEEVPLGEDCRDWAQK--LTEHERNLLTQIFRFFT 64

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
            ++  V +       R     E +  L   +  E VH   + +++ ++G+ E E ++ + 
Sbjct: 65  QADVEVQDCYHDKYGRVFKPTEVKMMLTAFSNMETVHIAAYSHLLDTIGMPESE-YSAFL 123

Query: 151 EVPSITAKANWALQY 165
           +   +  K N+  Q+
Sbjct: 124 DYEEMADKHNYMQQF 138


>gi|223039245|ref|ZP_03609535.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           rectus RM3267]
 gi|222879606|gb|EEF14697.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           rectus RM3267]
          Length = 340

 Score =  146 bits (369), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 72/186 (38%), Gaps = 4/186 (2%)

Query: 10  IQAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           I       N+ D+R+ N     +      KY WA + +     N W P EV    D+  +
Sbjct: 6   IYNPGSNENLTDRRVFNGNPHGILNFTKAKYQWALKLWDLMEANTWFPKEVDTSGDVRDY 65

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
                LT  E+ M         S +S   NN+   I  +++ PE    L RQA+EEA HS
Sbjct: 66  AY--SLTQAEKRMYDLVWSQLISMDSFQTNNLADNINPYITAPEINACLARQAYEEANHS 123

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILT 187
            ++  ++ ++  +   ++ M +    +  K ++    Y +     +         +  + 
Sbjct: 124 KSYAVMVEAICDNTDLIYEMEKHDEVLREKNDYISSVYEELAGEVTDEKLLLAMVANQIL 183

Query: 188 RSLRFL 193
             + F 
Sbjct: 184 EGIYFY 189


>gi|66802406|ref|XP_629985.1| ribonucleotide reductase-related [Dictyostelium discoideum AX4]
 gi|60463390|gb|EAL61578.1| ribonucleotide reductase-related [Dictyostelium discoideum AX4]
          Length = 257

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 32  NQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFAS 91
           N++ PL     W+ Y     N W+  E+   DD   W+ K  LT+DER      L FF +
Sbjct: 80  NEISPL---DIWKMYKKTLANQWVVEEIESSDDGLDWEKK--LTNDERDFFSNVLAFFVA 134

Query: 92  SESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD---EGELFNM 148
           S  ++  N+       +  PE + +   Q   + +HS T+  +I +   D   + +LFN 
Sbjct: 135 SCGIINKNL-NRFMSKVQIPEAKCFYNYQIHIKYLHSETYSLLIETCIKDKNIKDKLFNA 193

Query: 149 YREVPSITAKANWALQYTQ 167
              +P +  KA WAL++  
Sbjct: 194 IETIPCVKKKAEWALKWIN 212


>gi|197322443|ref|YP_002154716.1| putative ribonucleotide reductase small subunit [Feldmannia species
           virus]
 gi|197130510|gb|ACH46846.1| putative ribonucleotide reductase small subunit [Feldmannia species
           virus]
          Length = 342

 Score =  146 bits (368), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 65/178 (36%), Gaps = 22/178 (12%)

Query: 24  MLNARSDVNQLLP----LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER 79
             ++  D   L       +Y   +  Y       W   E+ + +D+  W      + DE+
Sbjct: 21  HEDSEFDRFILFNQKSEFEYADVYALYKKEIACFWTVEEMDLSEDVECWDKS---SSDEQ 77

Query: 80  LMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
             I   L FFAS + +V  N+ +     +  P+ R +   Q   E++H   +  +I +  
Sbjct: 78  HFIIHILAFFASLDQIVMENVSVNFGDEIVIPQVRSHFAIQNAIESIHGEAYSILIQTYV 137

Query: 140 LD---EGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            +   + ++    +E+P I  KA W   +    +              +  R + F C
Sbjct: 138 KNSQQQSKILRSVQEMPIIRKKAQWVTSWMDPETC------------SLAERLVAFTC 183


>gi|16332312|ref|NP_443040.1| hypothetical protein slr0591 [Synechocystis sp. PCC 6803]
 gi|1653942|dbj|BAA18852.1| slr0591 [Synechocystis sp. PCC 6803]
          Length = 355

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 83/192 (43%), Gaps = 8/192 (4%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           ++PI       +V+++ +    + ++ QL  ++Y WA   Y     N W+P  + +  D+
Sbjct: 14  VTPIFNPTGNDSVENRTIWFGNTTNLMQLNDVRYNWAVGLYQQMRENFWIPQRLDITQDV 73

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             +     LT++ER      L +    +S+   NI   +   ++ PE    +  Q  +E 
Sbjct: 74  TDY---WNLTNEERYAFDGILSYLTFLDSVQTCNIP-HLKSSVTAPEISLCMAEQISQEG 129

Query: 126 VHSHTFQYIITSLGL--DEGELFNMYREVPSITAKANW-ALQYTQTLSSPSFHYWNKRRR 182
           +H+ ++QY+I ++       +++  +R    +  +  + A+ Y + +  P+   +     
Sbjct: 130 MHNQSYQYMIETIIPTEKRDKVYEFWRTDRVLKERCEYIAMLYQKYVDHPTQENYFIALM 189

Query: 183 SRILTRSLRFLC 194
           +  L   L F  
Sbjct: 190 ADYLLEGLYFYN 201


>gi|103487260|ref|YP_616821.1| ribonucleotide-diphosphate reductase subunit beta [Sphingopyxis
           alaskensis RB2256]
 gi|98977337|gb|ABF53488.1| Ribonucleoside-diphosphate reductase [Sphingopyxis alaskensis
           RB2256]
          Length = 354

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 33/135 (24%), Positives = 63/135 (46%), Gaps = 3/135 (2%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
                P +Y WA++ +      HW+P EVP+ +D   W  K  ++D ER ++ +   FF 
Sbjct: 7   RKTYKPFEYPWAFDFWKRQQQIHWVPEEVPLGEDCRDWAQK--ISDHERNLLTQIFRFFT 64

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
            ++  V +       R     E +  L   +  E VH   + +++ ++G+ E E + M+ 
Sbjct: 65  QADIEVQDCYHEKYGRVFKPTEIKMMLTAFSNMETVHIAAYSHLLDTIGMPESE-YGMFL 123

Query: 151 EVPSITAKANWALQY 165
           E   + AK ++  Q+
Sbjct: 124 EYDEMRAKHDYMQQF 138


>gi|154174558|ref|YP_001409201.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           curvus 525.92]
 gi|112803525|gb|EAU00869.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           curvus 525.92]
          Length = 340

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 41/186 (22%), Positives = 74/186 (39%), Gaps = 4/186 (2%)

Query: 10  IQAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           I       N+ D+R+ N     +      KY WA + +     N W P EV   DD+  +
Sbjct: 6   IYNPSSNENLTDRRVFNGNPHGILNFTKAKYQWALKLWDLMEANTWFPKEVDTTDDVRDY 65

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
                LTD E+ M         S +S   NN+   I  +++ PE    L RQA+EEA HS
Sbjct: 66  AY--NLTDAEKRMYDLVWSQLISMDSFQTNNLADNINPYITAPEINAVLSRQAYEEANHS 123

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILT 187
            ++  ++ ++  +   ++ M +    +  K ++    Y +     +         +  + 
Sbjct: 124 KSYAVMVEAICDNTDLIYEMEKHDEVLREKNDYISSVYEELAGEVTDEKLLLAMVANQIL 183

Query: 188 RSLRFL 193
             + F 
Sbjct: 184 EGIYFY 189


>gi|148284015|ref|YP_001248105.1| ribonucleotide-diphosphate reductase subunit beta [Orientia
           tsutsugamushi str. Boryong]
 gi|146739454|emb|CAM79093.1| ribonucleoside-diphosphate reductase beta chain [Orientia
           tsutsugamushi str. Boryong]
          Length = 329

 Score =  145 bits (367), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 63/130 (48%), Gaps = 3/130 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA++ + +    HW+P EVP+ DD+  WK    LT  E+ ++ +   FF  ++  
Sbjct: 12  PFSYPWAYKAWHTQQKIHWLPEEVPLADDIKDWKY--NLTPGEKHLLTQIFRFFTQADIE 69

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V N  +    R     E +  L   +  E +H   + +++ ++G+ E E +  + +  ++
Sbjct: 70  VNNCYMKHYARVFQPTEVQMMLSAFSNMETIHIAAYSHLLDTIGMPETE-YQAFMKYKAM 128

Query: 156 TAKANWALQY 165
             K ++  ++
Sbjct: 129 KDKYDYMQRF 138


>gi|189184364|ref|YP_001938149.1| ribonucleotide-diphosphate reductase subunit beta [Orientia
           tsutsugamushi str. Ikeda]
 gi|189181135|dbj|BAG40915.1| ribonucleoside-diphosphate reductase beta chain [Orientia
           tsutsugamushi str. Ikeda]
          Length = 359

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 63/130 (48%), Gaps = 3/130 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA++ + +    HW+P EVP+ DD+  WK    LT  E+ ++ +   FF  ++  
Sbjct: 27  PFSYPWAYKAWHTQQKIHWLPEEVPLADDIKDWKY--NLTPGEKHLLTQIFRFFTQADIE 84

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V N  +    R     E +  L   +  E +H   + +++ ++G+ E E +  + +  ++
Sbjct: 85  VNNCYMKHYARVFQPTEVQMMLSAFSNMETIHIAAYSHLLDTIGMPETE-YQAFMKYKAM 143

Query: 156 TAKANWALQY 165
             K ++  ++
Sbjct: 144 KDKYDYMQRF 153


>gi|148554425|ref|YP_001262007.1| ribonucleotide-diphosphate reductase subunit beta [Sphingomonas
           wittichii RW1]
 gi|148499615|gb|ABQ67869.1| Ribonucleoside-diphosphate reductase [Sphingomonas wittichii RW1]
          Length = 350

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 63/160 (39%), Gaps = 15/160 (9%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
              P +Y WA+E +      HW+P EVP+ +D   W  K  LTD ER ++ +   FF  +
Sbjct: 9   TYKPFEYPWAFEYWKRQQQLHWLPEEVPLGEDCRDWAQK--LTDHERNLLTQIFRFFTQA 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
           +  V +       R     E +  L   +  E VH   + +++ ++G+ E E ++ + + 
Sbjct: 67  DVEVQDCYHDKYGRVFKPTEIKMMLTAFSNMETVHIAAYSHLLDTIGMPETE-YSAFLQY 125

Query: 153 PSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             +  K ++               +       I      F
Sbjct: 126 KEMKDKHDY------------LSTFGVDTDEDIARTLAMF 153


>gi|269958883|ref|YP_003328672.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           centrale str. Israel]
 gi|269848714|gb|ACZ49358.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           centrale str. Israel]
          Length = 332

 Score =  145 bits (366), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 36/146 (24%), Positives = 71/146 (48%), Gaps = 5/146 (3%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
                P  Y WA++ +L     HW+P EVP+ DD+  WK+K  L++ E+ ++ +   FF 
Sbjct: 15  RPVYKPFYYPWAYDAWLCQQRIHWIPEEVPLADDVQDWKTK--LSEQEKNLLVQIFRFFT 72

Query: 91  SSESLVANNIVLAIYRHLSNP-ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY 149
            ++  V NN  +  Y ++  P E    L   +  E VH   + Y++ ++G+ E E +  +
Sbjct: 73  QADIEV-NNCYMKHYSNIFKPTEICMMLSAFSNMETVHIAAYSYLLDTIGMPEVE-YQAF 130

Query: 150 REVPSITAKANWALQYTQTLSSPSFH 175
            +   +  K ++  ++ ++      H
Sbjct: 131 LKFEVMKKKYDYMQRFEESRKGDKRH 156


>gi|151943458|gb|EDN61769.1| ribonucleotide reductase [Saccharomyces cerevisiae YJM789]
 gi|190406805|gb|EDV10072.1| ribonucleotide reductase [Saccharomyces cerevisiae RM11-1a]
 gi|256270921|gb|EEU06048.1| Rnr4p [Saccharomyces cerevisiae JAY291]
 gi|259146684|emb|CAY79941.1| Rnr4p [Saccharomyces cerevisiae EC1118]
 gi|323333575|gb|EGA74969.1| Rnr4p [Saccharomyces cerevisiae AWRI796]
 gi|323348450|gb|EGA82695.1| Rnr4p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 345

 Score =  144 bits (365), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 69/187 (36%), Gaps = 17/187 (9%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
           +  + +    D+ +L   S    + P+KY   W  Y     + W   E+ +  D   ++ 
Sbjct: 14  ERHDMKEAEKDEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQK 73

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              LTDD++  I   L    SS++LV   ++      L NPE + +   Q   E ++S  
Sbjct: 74  ---LTDDQKTYIGNLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEV 130

Query: 131 FQYIITSLGLDEGEL--FNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
           +  ++ +   D   +  F     +P +  K  +  ++                 S    R
Sbjct: 131 YSMMVDAFFKDPKNIPLFKEIANLPEVKHKTAFIERWISN------------DDSLYAER 178

Query: 189 SLRFLCR 195
            + F  +
Sbjct: 179 LVAFAAK 185


>gi|323337480|gb|EGA78728.1| Rnr4p [Saccharomyces cerevisiae Vin13]
          Length = 328

 Score =  144 bits (365), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 66/177 (37%), Gaps = 17/177 (9%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           D+ +L   S    + P+KY   W  Y     + W   E+ +  D   ++    LTDD++ 
Sbjct: 7   DEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQK---LTDDQKT 63

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
            I   L    SS++LV   ++      L NPE + +   Q   E ++S  +  ++ +   
Sbjct: 64  YIGNLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMVDAFFK 123

Query: 141 DEGEL--FNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLCR 195
           D   +  F     +P +  K  +  ++                 S    R + F  +
Sbjct: 124 DPKNIPLFKEIANLPEVKHKTAFIERWISN------------DDSLYAERLVAFAAK 168


>gi|268678691|ref|YP_003303122.1| ribonucleoside-diphosphate reductase [Sulfurospirillum deleyianum
           DSM 6946]
 gi|268616722|gb|ACZ11087.1| Ribonucleoside-diphosphate reductase [Sulfurospirillum deleyianum
           DSM 6946]
          Length = 340

 Score =  144 bits (365), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 73/189 (38%), Gaps = 4/189 (2%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
              I       +++D+++       +      KY WA + +     N W P EV    D+
Sbjct: 3   RKKIYNPNSDESLNDRKVFGGNPHGILNFTKAKYTWALKLWDMMEGNTWFPKEVDTTKDV 62

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             +     LTD E+ M         S +S   NN+   I  +++ PE    L RQA+EEA
Sbjct: 63  IDYNK--NLTDAEKRMYDLVWSQLISMDSFQTNNLADNINPYITAPEINACLSRQAYEEA 120

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSR 184
            HS ++  ++ ++  +   ++ M +    +  K ++    Y +     +         + 
Sbjct: 121 NHSKSYAVMVEAMCDNTDLIYEMEKHDEVLRRKNDYISSVYEELAGDVTEEKLVLAMFAN 180

Query: 185 ILTRSLRFL 193
            +   + F 
Sbjct: 181 QILEGIYFY 189


>gi|157164305|ref|YP_001467763.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           concisus 13826]
 gi|112800348|gb|EAT97692.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           concisus 13826]
          Length = 340

 Score =  144 bits (365), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 74/186 (39%), Gaps = 4/186 (2%)

Query: 10  IQAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           I       N+ D+R+ N     +      KY WA + +     N W P EV   DD+  +
Sbjct: 6   IYNPSSNENLTDRRVFNGNPHGILNFTKAKYEWALKLWDLMEANTWFPKEVDTTDDVRDY 65

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
                LT+ E+ M         S +S   NN+   I  +++ PE    L RQA+EEA HS
Sbjct: 66  AY--NLTEAEKRMYDLVWSQLISMDSFQTNNLADNINPYITAPEINAVLSRQAYEEANHS 123

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILT 187
            ++  ++ ++  +   ++ M +    +  K ++    Y +     +         +  + 
Sbjct: 124 KSYAVMVEAICDNTDLIYEMEKHDDVLREKNDYISSVYEELAGEVTDEKLLLAMVANQIL 183

Query: 188 RSLRFL 193
             + F 
Sbjct: 184 EGIYFY 189


>gi|222475064|ref|YP_002563479.1| ribonuceoside-diphosphate reductase beta chain (nrdB) [Anaplasma
           marginale str. Florida]
 gi|222419200|gb|ACM49223.1| ribonuceoside-diphosphate reductase beta chain (nrdB) [Anaplasma
           marginale str. Florida]
          Length = 343

 Score =  144 bits (364), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 36/146 (24%), Positives = 71/146 (48%), Gaps = 5/146 (3%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
                P  Y WA++ +L     HW+P EVP+ DD+  WK+K  L++ E+ ++ +   FF 
Sbjct: 26  RPVYKPFYYPWAYDAWLCQQRIHWIPEEVPLADDVQDWKTK--LSEQEKNLLVQIFRFFT 83

Query: 91  SSESLVANNIVLAIYRHLSNP-ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY 149
            ++  V NN  +  Y ++  P E    L   +  E VH   + Y++ ++G+ E E +  +
Sbjct: 84  QADIEV-NNCYMKHYSNIFKPTEICMMLSAFSNMETVHIAAYSYLLDTIGMPEVE-YQAF 141

Query: 150 REVPSITAKANWALQYTQTLSSPSFH 175
            +   +  K ++  ++ ++      H
Sbjct: 142 LKFEVMKKKYDYMQRFEESRKGDKRH 167


>gi|190570498|ref|YP_001974856.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Culex quinquefasciatus Pel]
 gi|213019257|ref|ZP_03335064.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Culex quinquefasciatus JHB]
 gi|190356770|emb|CAQ54129.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Culex quinquefasciatus Pel]
 gi|212995366|gb|EEB56007.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Culex quinquefasciatus JHB]
          Length = 329

 Score =  144 bits (364), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 36/141 (25%), Positives = 72/141 (51%), Gaps = 5/141 (3%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA++ +L     HW+P EVP+ DD+  WK+K  L++ E+ ++ +   FF  ++  
Sbjct: 12  PFNYPWAYDAWLQQQRIHWIPEEVPLADDVKDWKTK--LSNVEKNLLTQIFRFFTQADIE 69

Query: 96  VANNIVLAIYRHLSNP-ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPS 154
           V NN  +  Y ++  P E    L   +  E +H   + Y++ ++G+ E E +  + +  +
Sbjct: 70  V-NNCYMRHYSNIFKPTEICMMLASFSNMETIHIAAYSYLLDTIGMPESE-YQAFLKYDA 127

Query: 155 ITAKANWALQYTQTLSSPSFH 175
           +  K  + L++ ++      H
Sbjct: 128 MRKKYEYMLEFEESKKQDKKH 148


>gi|329113329|ref|ZP_08242110.1| Ribonucleoside-diphosphate reductase subunit beta [Acetobacter
           pomorum DM001]
 gi|326697154|gb|EGE48814.1| Ribonucleoside-diphosphate reductase subunit beta [Acetobacter
           pomorum DM001]
          Length = 339

 Score =  144 bits (363), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 10/170 (5%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           +S   +G++        +L A        P +Y WA++ +L+    HW+P EVP+ DD+ 
Sbjct: 1   MSEHMSGQEPQQEQKFDLLTANP---VYKPFRYPWAYDAWLTQQRLHWLPEEVPLADDVK 57

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            W     L + E+ ++ +   FF  S+  V N  +    R     E    L   +  E +
Sbjct: 58  DWH--RVLNEGEQHLVTQIFRFFTQSDVEVNNCYMKHYSRVFKPTEVLMMLSAFSNIETI 115

Query: 127 HSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHY 176
           H   + Y++ +LG+ E E ++ + +   +  K +    Y QT +  S H 
Sbjct: 116 HIAAYSYLLDTLGMPETE-YSAFLKYKEMKDKYD----YMQTFTVDSKHE 160


>gi|258542157|ref|YP_003187590.1| ribonucleotide-diphosphate reductase subunit beta [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256633235|dbj|BAH99210.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256636294|dbj|BAI02263.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-03]
 gi|256639347|dbj|BAI05309.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-07]
 gi|256642403|dbj|BAI08358.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-22]
 gi|256645458|dbj|BAI11406.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-26]
 gi|256648511|dbj|BAI14452.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-32]
 gi|256651564|dbj|BAI17498.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256654555|dbj|BAI20482.1| ribonucleotide-diphosphate reductase beta subunit [Acetobacter
           pasteurianus IFO 3283-12]
          Length = 339

 Score =  144 bits (363), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 10/170 (5%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           +S   +G++        +L A        P +Y WA++ +L+    HW+P EVP+ DD+ 
Sbjct: 1   MSEHMSGQEPQQEQKFDLLTANP---VYKPFRYPWAYDAWLTQQRLHWLPEEVPLADDVK 57

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            W     L + E+ ++ +   FF  S+  V N  +    R     E    L   +  E +
Sbjct: 58  DWH--RVLNEGEQHLVTQIFRFFTQSDVEVNNCYMKHYSRVFKPTEVLMMLSAFSNIETI 115

Query: 127 HSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHY 176
           H   + Y++ +LG+ E E ++ + +   +  K +    Y QT +  S H 
Sbjct: 116 HIAAYSYLLDTLGMPETE-YSAFLKYKEMKDKYD----YMQTFTVDSKHE 160


>gi|56416698|ref|YP_153772.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           marginale str. St. Maries]
 gi|254994906|ref|ZP_05277096.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           marginale str. Mississippi]
 gi|255003042|ref|ZP_05278006.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           marginale str. Puerto Rico]
 gi|255004164|ref|ZP_05278965.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           marginale str. Virginia]
 gi|56387930|gb|AAV86517.1| ribonuceoside-diphosphate reductase beta chain [Anaplasma marginale
           str. St. Maries]
          Length = 324

 Score =  144 bits (363), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 36/146 (24%), Positives = 71/146 (48%), Gaps = 5/146 (3%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
                P  Y WA++ +L     HW+P EVP+ DD+  WK+K  L++ E+ ++ +   FF 
Sbjct: 7   RPVYKPFYYPWAYDAWLCQQRIHWIPEEVPLADDVQDWKTK--LSEQEKNLLVQIFRFFT 64

Query: 91  SSESLVANNIVLAIYRHLSNP-ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY 149
            ++  V NN  +  Y ++  P E    L   +  E VH   + Y++ ++G+ E E +  +
Sbjct: 65  QADIEV-NNCYMKHYSNIFKPTEICMMLSAFSNMETVHIAAYSYLLDTIGMPEVE-YQAF 122

Query: 150 REVPSITAKANWALQYTQTLSSPSFH 175
            +   +  K ++  ++ ++      H
Sbjct: 123 LKFEVMKKKYDYMQRFEESRKGDKRH 148


>gi|154250961|ref|YP_001411785.1| ribonucleotide-diphosphate reductase subunit beta [Parvibaculum
           lavamentivorans DS-1]
 gi|154154911|gb|ABS62128.1| Ribonucleoside-diphosphate reductase [Parvibaculum lavamentivorans
           DS-1]
          Length = 319

 Score =  144 bits (363), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 34/137 (24%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
            + +   P +Y WA+E +L+    HW+P EVP+ DD+  W  K  LT+ ER ++ +   F
Sbjct: 5   EERHVYKPFRYPWAYEAWLTQQRIHWLPEEVPLADDVKDWSKK--LTEGERNLLTQIFRF 62

Query: 89  FASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNM 148
           F  ++  V N  +    R     E +  L   +  E VH   + +++ ++G+ E E +  
Sbjct: 63  FVQADVEVNNCYMKHYSRVFKPTEVQMMLAAFSNIETVHISAYSHLLDTIGMPEAE-YEA 121

Query: 149 YREVPSITAKANWALQY 165
           + +   +  K ++  ++
Sbjct: 122 FLKYEQMKTKFDYMQEW 138


>gi|296536499|ref|ZP_06898590.1| ribonucleotide-diphosphate reductase subunit beta [Roseomonas
           cervicalis ATCC 49957]
 gi|296263178|gb|EFH09712.1| ribonucleotide-diphosphate reductase subunit beta [Roseomonas
           cervicalis ATCC 49957]
          Length = 343

 Score =  144 bits (363), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 72/175 (41%), Gaps = 8/175 (4%)

Query: 19  VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
            +   +L A        P +Y WA++ +++    HW+P EVPM DD+  W+    LT+ E
Sbjct: 7   PEKMDLLTANP---VYKPFRYPWAYDAWMTQQRVHWLPEEVPMADDVKDWQK--NLTESE 61

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           R ++ +   FF  ++  V N  +    +     E    L   +  E +H   + +++ ++
Sbjct: 62  RNLLTQIFRFFTQADVEVNNCYMKHYSQVFKPTEVLMMLSAFSNIETIHIAAYSHLLDTI 121

Query: 139 GLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           G+ E E +  + +   +  K ++   +  ++ + +                  F 
Sbjct: 122 GMPETE-YQAFLKYKEMKDKYDYMQSF--SVENKTEIAKTLAAFGAFTEGLQLFA 173


>gi|159030376|emb|CAO91271.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 355

 Score =  144 bits (363), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 39/192 (20%), Positives = 83/192 (43%), Gaps = 8/192 (4%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           +SPI        ++++ +    + ++ QL  ++Y W+   Y     N W+P  + +  D+
Sbjct: 14  ISPIFNPSGDDAIENRSIWFGNTTNLMQLNDVRYTWSVGLYQQMRENFWIPQRLDITQDV 73

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             +     LTD+ER      L +    +S+   NI   +   ++ PE    +  Q  +EA
Sbjct: 74  TEY---GHLTDEERYAYDGILSYLTFLDSVQTCNIP-HLKGSVTAPEISLCMAEQISQEA 129

Query: 126 VHSHTFQYIITSLGLD--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           +H+ ++QY+I ++      GE+++ +R    +  +  +    Y Q +   +   +     
Sbjct: 130 MHNQSYQYLIETIIPSDRRGEVYDFWRTDKVLKDRCEFIASLYQQYIDKQTTESYFIALL 189

Query: 183 SRILTRSLRFLC 194
           +  L  SL F  
Sbjct: 190 ADYLLESLYFYN 201


>gi|118197598|ref|YP_874310.1| ribonucleotide reductase small subunit [Ecotropis obliqua NPV]
 gi|113472593|gb|ABI35800.1| ribonucleotide reductase small subunit [Ecotropis obliqua NPV]
          Length = 341

 Score =  143 bits (362), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 42/177 (23%), Positives = 75/177 (42%), Gaps = 16/177 (9%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
              +LP++    W    +A +  W   E  +  D   W+ K  L   ER  +K  L FFA
Sbjct: 8   RKVILPIENQNLWRMDKTAMDCMWKVEEDDLSRDFDDWRHK--LCVQERFFLKHILAFFA 65

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFN 147
           S++++V  N++  +   +   E R +  +Q   E VHS  +  ++     +  E   L N
Sbjct: 66  SADTIVNINLIDYVRAAVPELEARYFYDQQILIENVHSEMYSLLVFEYIKNSEERNKLLN 125

Query: 148 MYREVPSITAKANWALQYTQTLSSPSF-----------HYWNKRRRSRILTRSLRFL 193
            +  +  I  KA WAL++T++     +            + NK   S++  R + F 
Sbjct: 126 AFDRIDCIKKKAQWALKWTESKWWQDYWVDPVLGCVQRRFRNKSYPSKLARRMIAFA 182


>gi|172054963|ref|YP_001806290.1| ribonucleoside-diphosphate reductase subunit beta [Cyanothece sp.
           ATCC 51142]
 gi|171701244|gb|ACB54224.1| ribonucleoside-diphosphate reductase beta subunit [Cyanothece sp.
           ATCC 51142]
          Length = 347

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 45/190 (23%), Positives = 83/190 (43%), Gaps = 8/190 (4%)

Query: 8   SPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           SPI     + N + + +    + +V  L   +YGWA   Y +    +W+P    +  D  
Sbjct: 9   SPIFNPTGKDNKEKRHLWGGDTTNVINLNETRYGWARTIYQTMREGYWIPQRTDLSQDKL 68

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            + +   L   ER  +K  L +    +S+   NI   + R+++ PE R  L  Q  +EA+
Sbjct: 69  DYVN---LIPGERRALKGILSYLNFLDSVQVANIPE-LSRYITAPEARMCLAEQTSQEAM 124

Query: 127 HSHTFQYIITSLGL--DEGELFNMYREVPSITAKANWALQYTQTLSS-PSFHYWNKRRRS 183
           H  T+QYI  S+    ++ E+++ +++   +  +  +   Y QTL+  P    +      
Sbjct: 125 HGETYQYITESIIPENEQHEVYDFWKKDLLLNERCEFIASYYQTLADNPCGETYFMALIG 184

Query: 184 RILTRSLRFL 193
             L   L F 
Sbjct: 185 DYLLEGLLFY 194


>gi|99036000|ref|ZP_01315041.1| hypothetical protein Wendoof_01000112 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 329

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 36/141 (25%), Positives = 71/141 (50%), Gaps = 5/141 (3%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA++ +L     HW+P EVP+ DD+  WK+K  L+  E+ ++ +   FF  ++  
Sbjct: 12  PFNYPWAYDAWLQQQRIHWIPEEVPLADDVKDWKTK--LSSVEKNLLTQIFRFFTQADIE 69

Query: 96  VANNIVLAIYRHLSNP-ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPS 154
           V NN  +  Y ++  P E    L   +  E +H   + Y++ ++G+ E E +  + +  +
Sbjct: 70  V-NNCYMRHYSNIFKPTEICMMLASFSNMETIHIAAYSYLLDTIGMPESE-YQAFLKYDA 127

Query: 155 ITAKANWALQYTQTLSSPSFH 175
           +  K  + L++ ++      H
Sbjct: 128 MRKKYEYMLEFEESKKHDKKH 148


>gi|42520108|ref|NP_966023.1| ribonucleotide-diphosphate reductase subunit beta [Wolbachia
           endosymbiont of Drosophila melanogaster]
 gi|58696705|ref|ZP_00372253.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila simulans]
 gi|58698234|ref|ZP_00373154.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila ananassae]
 gi|225630036|ref|YP_002726827.1| ribonucleotide-diphosphate reductase beta subunit [Wolbachia sp.
           wRi]
 gi|42409845|gb|AAS13957.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila melanogaster]
 gi|58535261|gb|EAL59340.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila ananassae]
 gi|58537117|gb|EAL60231.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila simulans]
 gi|225592017|gb|ACN95036.1| ribonucleotide-diphosphate reductase beta subunit [Wolbachia sp.
           wRi]
          Length = 329

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 36/141 (25%), Positives = 71/141 (50%), Gaps = 5/141 (3%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA++ +L     HW+P EVP+ DD+  WK+K  L+  E+ ++ +   FF  ++  
Sbjct: 12  PFNYPWAYDAWLQQQRIHWIPEEVPLADDVKDWKTK--LSSVEKNLLTQIFRFFTQADIE 69

Query: 96  VANNIVLAIYRHLSNP-ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPS 154
           V NN  +  Y ++  P E    L   +  E +H   + Y++ ++G+ E E +  + +  +
Sbjct: 70  V-NNCYMRHYSNIFKPTEICMMLASFSNMETIHIAAYSYLLDTIGMPESE-YQAFLKYDA 127

Query: 155 ITAKANWALQYTQTLSSPSFH 175
           +  K  + L++ ++      H
Sbjct: 128 MRKKYEYMLEFEESKKHDKKH 148


>gi|288817346|ref|YP_003431693.1| ribonucleotide reductase beta subunit [Hydrogenobacter thermophilus
           TK-6]
 gi|288786745|dbj|BAI68492.1| ribonucleotide reductase beta subunit [Hydrogenobacter thermophilus
           TK-6]
 gi|308750953|gb|ADO44436.1| ribonucleotide reductase [Hydrogenobacter thermophilus TK-6]
          Length = 342

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 43/189 (22%), Positives = 91/189 (48%), Gaps = 8/189 (4%)

Query: 10  IQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSA-CNNHWMPTEVPMQDDLAL 67
           I   +       ++++    +++ +L  +KY WA++ Y +    N W+P E+PM +D   
Sbjct: 6   IFNPQGDRETSKRKVIFGNPTNIMELNNVKYQWAFDLYKTMGFTNFWVPEEIPMHEDKKQ 65

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           ++    L+  E+   +  L F  + +S    N++    R+++ PE    L  Q F+EA+H
Sbjct: 66  YEK--DLSPYEKRAYEMVLSFLIALDSYQV-NMLKEFARYITAPELVMALTSQEFQEALH 122

Query: 128 SHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSR 184
           S+++Q+I+ S+   +   E++N +R+   +  +     Q Y + +  P+   + K     
Sbjct: 123 SYSYQFILESVVEPQVADEIYNYWRQDTVLMERNQVIAQLYNEFIRHPTEENFIKATFGN 182

Query: 185 ILTRSLRFL 193
            +  SL F 
Sbjct: 183 YVLESLYFY 191


>gi|326403282|ref|YP_004283363.1| ribonucleoside-diphosphate reductase beta subunit [Acidiphilium
           multivorum AIU301]
 gi|325050143|dbj|BAJ80481.1| ribonucleoside-diphosphate reductase beta subunit [Acidiphilium
           multivorum AIU301]
          Length = 338

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 63/133 (47%), Gaps = 3/133 (2%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
              P +Y WA+E +L+    HW+P EVP+ DD+  W     LT  ER ++ +   FF  +
Sbjct: 28  VYKPFRYPWAYEAWLTQQRVHWLPEEVPLADDVKDWH--RNLTPGERNLLTQIFRFFTQA 85

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
           +  V N  +    +     E    L   +  E +H   + +++ ++G+ E E ++ + + 
Sbjct: 86  DVEVNNCYMKHYSQVFKPTEVLMMLSAFSNIETIHIAAYSHLLDTIGMPEVE-YSAFLKY 144

Query: 153 PSITAKANWALQY 165
             +  K ++  ++
Sbjct: 145 KEMKDKYDYMQEF 157


>gi|157803769|ref|YP_001492318.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           canadensis str. McKiel]
 gi|157785032|gb|ABV73533.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           canadensis str. McKiel]
          Length = 324

 Score =  143 bits (361), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA++ + +    HW+P EVP+ DD+  WK    LT  E+ ++ +   FF  ++  
Sbjct: 12  PFSYPWAYDAWHTQQKIHWLPEEVPLADDVKDWKY--NLTPGEKHLLTQIFRFFTQADIE 69

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V N  +    R     E    L   +  E +H   + +++ ++G+ E E ++ + +   +
Sbjct: 70  VNNCYMKHYSRVFKPTEILMMLSAFSNMETIHIAAYSHLLDTVGMPEVE-YSAFLKYKEM 128

Query: 156 TAKANWALQY 165
             K ++  Q+
Sbjct: 129 KDKYDYMQQF 138


>gi|148259750|ref|YP_001233877.1| ribonucleotide-diphosphate reductase subunit beta [Acidiphilium
           cryptum JF-5]
 gi|146401431|gb|ABQ29958.1| Ribonucleoside-diphosphate reductase [Acidiphilium cryptum JF-5]
          Length = 338

 Score =  143 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 63/133 (47%), Gaps = 3/133 (2%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
              P +Y WA+E +L+    HW+P EVP+ DD+  W     LT  ER ++ +   FF  +
Sbjct: 28  VYKPFRYPWAYEAWLTQQRVHWLPEEVPLADDVKDWH--RNLTPGERNLLTQIFRFFTQA 85

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
           +  V N  +    +     E    L   +  E +H   + +++ ++G+ E E ++ + + 
Sbjct: 86  DVEVNNCYMKHYSQVFKPTEVLMMLSAFSNIETIHIAAYSHLLDTIGMPEVE-YSAFLKY 144

Query: 153 PSITAKANWALQY 165
             +  K ++  ++
Sbjct: 145 KEMKDKYDYMQEF 157


>gi|15606660|ref|NP_214040.1| ribonucleotide reductase beta chain [Aquifex aeolicus VF5]
 gi|18202109|sp|O67475|RIR2_AQUAE RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit;
           Contains: RecName: Full=Aae nrdB intein; AltName:
           Full=Aae RIR2 intein
 gi|2983879|gb|AAC07431.1| ribonucleotide reductase beta chain [Aquifex aeolicus VF5]
          Length = 696

 Score =  143 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 40/189 (21%), Positives = 88/189 (46%), Gaps = 8/189 (4%)

Query: 10  IQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSA-CNNHWMPTEVPMQDDLAL 67
           I   +       ++++    +++ +L  +KY WA++ Y      N W+P E+ M +D   
Sbjct: 14  IFNPQGDREASKRKIIKGNPTNIFELNEIKYSWAFDLYKLMGFTNFWIPEEIQMLEDRKQ 73

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           +++   L+D E+   +  L F  + +S   + +     R ++ PE    +  Q F+E+VH
Sbjct: 74  YET--VLSDYEKRAYELVLSFLIALDSFQVDMLKE-FGRMITAPEVEMAITAQEFQESVH 130

Query: 128 SHTFQYIITSLGLD--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSR 184
           ++++Q+I+ S+       E++N +RE   +  +     + Y + +  P+   + K     
Sbjct: 131 AYSYQFILESVVDPVKADEIYNYWREDERLLERNKVIAELYNEFIRKPNEENFIKATIGN 190

Query: 185 ILTRSLRFL 193
            +  SL F 
Sbjct: 191 YILESLYFY 199


>gi|225677302|ref|ZP_03788281.1| ribonucleotide-diphosphate reductase beta [Wolbachia endosymbiont
           of Muscidifurax uniraptor]
 gi|225590665|gb|EEH11913.1| ribonucleotide-diphosphate reductase beta [Wolbachia endosymbiont
           of Muscidifurax uniraptor]
          Length = 329

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 36/141 (25%), Positives = 71/141 (50%), Gaps = 5/141 (3%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA++ +L     HW+P EVP+ DD+  WK+K  L+  E+ ++ +   FF  ++  
Sbjct: 12  PFNYPWAYDAWLQQQRIHWIPEEVPLADDVKDWKTK--LSSVEKNLLTQIFRFFTQADIE 69

Query: 96  VANNIVLAIYRHLSNP-ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPS 154
           V NN  +  Y ++  P E    L   +  E +H   + Y++ ++G+ E E +  + +  +
Sbjct: 70  V-NNCYMRHYSNIFKPTEICMMLASFSNMETIHIAAYSYLLDTIGMPESE-YQAFLKYDA 127

Query: 155 ITAKANWALQYTQTLSSPSFH 175
           +  K  + L++ ++      H
Sbjct: 128 MRKKYEYMLEFEESKKHDKKH 148


>gi|114327552|ref|YP_744709.1| ribonucleotide-diphosphate reductase subunit beta [Granulibacter
           bethesdensis CGDNIH1]
 gi|114315726|gb|ABI61786.1| ribonucleoside-diphosphate reductase beta chain [Granulibacter
           bethesdensis CGDNIH1]
          Length = 339

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 70/165 (42%), Gaps = 7/165 (4%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           M + T        E+ V V    +L          P +Y WA+E +L     HW+P EVP
Sbjct: 1   MTDETIQGAAPQAEQDVPVRFD-LLTENP---VYKPFRYPWAYEAWLVQQQVHWLPEEVP 56

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           + DD+  W     L + E+ ++ +   FF  S+  V N  +    R     E    L   
Sbjct: 57  LADDVKDWH--RNLNEVEQHLVTQIFRFFTQSDVEVNNCYMKHYSRVFKPTEVLMMLSAF 114

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQY 165
           +  E +H   + +++ ++G+ E E ++ + +   +  K ++   +
Sbjct: 115 SNIETIHIAAYSHLLDTIGMPEVE-YSAFLKYKEMKDKYDYMHSF 158


>gi|58040422|ref|YP_192386.1| ribonucleotide-diphosphate reductase subunit beta [Gluconobacter
           oxydans 621H]
 gi|58002836|gb|AAW61730.1| Ribonucleoside-diphosphate reductase beta chain [Gluconobacter
           oxydans 621H]
          Length = 339

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 63/133 (47%), Gaps = 3/133 (2%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
              P +Y WA++ +L+    HW+P EVP+ DD+  W     LT+ ER ++ +   FF  S
Sbjct: 24  VYKPFRYPWAYDAWLTQQRVHWLPEEVPLADDVKDWH--RTLTEAERHLVTQIFRFFTQS 81

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
           +  V +  +    +     E    L   +  E +H   + +++ ++G+ E E ++ + + 
Sbjct: 82  DVEVNSAYMKYYSQVFKPTEVLMMLSAFSNIETIHIAAYSHLLDTIGMPETE-YSAFLKY 140

Query: 153 PSITAKANWALQY 165
             +  K ++   +
Sbjct: 141 KEMKDKYDFMQSF 153


>gi|157964544|ref|YP_001499368.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           massiliae MTU5]
 gi|157844320|gb|ABV84821.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia
           massiliae MTU5]
          Length = 336

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA+E + +    HW+P EVP+ DD+  WK    LT  E+ ++ +   FF  ++  
Sbjct: 13  PFSYPWAYEAWHTQQKIHWLPEEVPLADDVKDWKY--NLTPGEKHLLTQIFRFFTQADIE 70

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V N  +    R     E    L   +  E VH   + +++ ++G+ E E ++ + +   +
Sbjct: 71  VNNCYMKHYSRVFKPTEILMMLSAFSNMETVHIAAYSHLLDTVGMPEVE-YSAFLKYKEM 129

Query: 156 TAKANWALQY 165
             K ++  Q+
Sbjct: 130 KDKYDYMQQF 139


>gi|239947951|ref|ZP_04699704.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsia
           endosymbiont of Ixodes scapularis]
 gi|239922227|gb|EER22251.1| ribonucleoside-diphosphate reductase, beta subunit [Rickettsia
           endosymbiont of Ixodes scapularis]
          Length = 327

 Score =  143 bits (360), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA+E + +    HW+P EVP+ DD+  WK    LT  E+ ++ +   FF  ++  
Sbjct: 12  PFSYPWAYEAWHTQQKIHWLPEEVPLADDVKDWKY--NLTPGEKHLLTQIFRFFTQADIE 69

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V N  +    R     E    L   +  E VH   + +++ ++G+ E E ++ + +   +
Sbjct: 70  VNNCYMKHYSRVFKPTEILMMLSAFSNMETVHIAAYSHLLDTVGMPEVE-YSAFLKYKEM 128

Query: 156 TAKANWALQY 165
             K ++  Q+
Sbjct: 129 KDKYDYMQQF 138


>gi|297530897|ref|YP_003672172.1| ribonucleotide reductase [Geobacillus sp. C56-T3]
 gi|297254149|gb|ADI27595.1| ribonucleotide reductase [Geobacillus sp. C56-T3]
          Length = 346

 Score =  142 bits (359), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 80/174 (45%), Gaps = 8/174 (4%)

Query: 24  MLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMI 82
           ++N R S+V     + Y WA+ KY     N W P E+ M  D+   K    LTD E+   
Sbjct: 22  IINGRCSNVLNWDDIAYPWAYAKYKRMLANFWTPFEINMSQDV---KQFPQLTDREQDAF 78

Query: 83  KRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL-- 140
            + +G  A  +S+  +     +  ++++P     ++  A +E +H+H++ Y+++SL    
Sbjct: 79  LKIIGLLALLDSIQTD-YAGRVADYITDPSINALMIMLAQQEVIHNHSYSYVLSSLVPKA 137

Query: 141 DEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            + E+F+ +R  P++  + ++    Y      P+     +     ++   L F 
Sbjct: 138 KQDEVFDFWRNEPTLRKRNDFVTNGYKAFAEEPNVENLLRSIVFDVILEGLFFY 191


>gi|157135887|ref|XP_001663605.1| hypothetical protein AaeL_AAEL013412 [Aedes aegypti]
 gi|108870103|gb|EAT34328.1| conserved hypothetical protein [Aedes aegypti]
          Length = 244

 Score =  142 bits (358), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 6/106 (5%)

Query: 58  EVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYL 117
           EV +  DLA W+    L   E+  I   L FF +S+  +  N+V    + L   E R + 
Sbjct: 142 EVDLSKDLADWEK---LKSGEKHFISHVLAFFVASDGSMNENLVERFSQELQVTEARCFY 198

Query: 118 LRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKAN 160
             Q   E VHS  +  +I +   D  +   LFN    +P +  KA 
Sbjct: 199 GFQIAMENVHSEMYSLLIDTYIRDSKQREYLFNAIDNLPCVKKKAE 244


>gi|15892574|ref|NP_360288.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           conorii str. Malish 7]
 gi|34580440|ref|ZP_00141920.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia
           sibirica 246]
 gi|157828524|ref|YP_001494766.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           rickettsii str. 'Sheila Smith']
 gi|165933242|ref|YP_001650031.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           rickettsii str. Iowa]
 gi|229586746|ref|YP_002845247.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           africae ESF-5]
 gi|238650260|ref|YP_002916112.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           peacockii str. Rustic]
 gi|15619738|gb|AAL03189.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia conorii
           str. Malish 7]
 gi|28261825|gb|EAA25329.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia
           sibirica 246]
 gi|157801005|gb|ABV76258.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           rickettsii str. 'Sheila Smith']
 gi|165908329|gb|ABY72625.1| ribonucleoside-diphosphate reductase beta chain [Rickettsia
           rickettsii str. Iowa]
 gi|228021796|gb|ACP53504.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia africae
           ESF-5]
 gi|238624358|gb|ACR47064.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           peacockii str. Rustic]
          Length = 328

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA+E + +    HW+P EVP+ DD+  WK    LT  E+ ++ +   FF  ++  
Sbjct: 12  PFSYPWAYEAWHTQQKIHWLPEEVPLADDVKDWKY--NLTPGEKHLLTQIFRFFTQADIE 69

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V N  +    R     E    L   +  E VH   + +++ ++G+ E E ++ + +   +
Sbjct: 70  VNNCYMKHYSRVFKPTEILMMLSAFSNMETVHIAAYSHLLDTVGMPEVE-YSAFLKYKEM 128

Query: 156 TAKANWALQY 165
             K ++  Q+
Sbjct: 129 KDKYDYMQQF 138


>gi|91205547|ref|YP_537902.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           bellii RML369-C]
 gi|91069091|gb|ABE04813.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia bellii
           RML369-C]
          Length = 324

 Score =  141 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA+E + +    HW+P EVP+ DD+  WK    LT  E+ ++ +   FF  ++  
Sbjct: 12  PFSYPWAYEAWHTQQKIHWLPEEVPLADDVKDWKY--NLTPGEKHLLTQIFRFFTQADIE 69

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V N  +    R     E    L   +  E VH   + +++ ++G+ E E ++ + +   +
Sbjct: 70  VNNCYMKHYSRVFKPTEVMMMLSAFSNMETVHIAAYSHLLDTVGMPEVE-YSAFLKYKEM 128

Query: 156 TAKANWALQY 165
             K ++  Q+
Sbjct: 129 KDKYDYMQQF 138


>gi|157827263|ref|YP_001496327.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           bellii OSU 85-389]
 gi|157802567|gb|ABV79290.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           bellii OSU 85-389]
          Length = 324

 Score =  141 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA+E + +    HW+P EVP+ DD+  WK    LT  E+ ++ +   FF  ++  
Sbjct: 12  PFSYPWAYEAWHTQQKIHWLPEEVPLADDVKDWKY--NLTPGEKHLLTQIFRFFTQADIE 69

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V N  +    R     E    L   +  E VH   + +++ ++G+ E E ++ + +   +
Sbjct: 70  VNNCYMKHYSRVFKPTEVMMMLSAFSNMETVHIAAYSHLLDTVGMPEVE-YSAFLKYKEM 128

Query: 156 TAKANWALQY 165
             K ++  Q+
Sbjct: 129 KDKYDYMQQF 138


>gi|261419130|ref|YP_003252812.1| ribonucleoside-diphosphate reductase [Geobacillus sp. Y412MC61]
 gi|319765947|ref|YP_004131448.1| ribonucleotide reductase [Geobacillus sp. Y412MC52]
 gi|261375587|gb|ACX78330.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. Y412MC61]
 gi|317110813|gb|ADU93305.1| ribonucleotide reductase [Geobacillus sp. Y412MC52]
          Length = 346

 Score =  141 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 81/174 (46%), Gaps = 8/174 (4%)

Query: 24  MLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMI 82
           ++N R S+V     + Y WA+ KY     N W P E+ M  D+   K    LTD E+   
Sbjct: 22  IINGRCSNVLNWDDIAYPWAYAKYKRMLANFWTPFEINMSQDV---KQFPQLTDREQDAF 78

Query: 83  KRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL-- 140
            + +G  A  +S+  +     +  ++++P     ++  A +E +H+H++ Y+++SL    
Sbjct: 79  LKIIGLLALLDSIQTD-YAGRVADYITDPSINALMIMLAQQEVIHNHSYSYVLSSLVPKA 137

Query: 141 DEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            + E+F+ +R  P++  + ++    Y      P+  +  +     ++   L F 
Sbjct: 138 KQDEVFDFWRNEPTLRKRNDFVTNGYKAFAEEPNVEHLLRSIVFDVILEGLFFY 191


>gi|31322342|gb|AAP15464.1| ribonucleotide reductase small subunit [Rickettsia rickettsii str.
           'Sheila Smith']
          Length = 336

 Score =  141 bits (357), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 64/136 (47%), Gaps = 7/136 (5%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK------SKNGLTDDERLMIKRNLGFF 89
           P  Y WA+E + +    HW+P EVP+ DD+  WK       K+ LT  E+ ++ +   FF
Sbjct: 12  PFSYPWAYEAWHTQQKIHWLPEEVPLADDVKDWKYNLTPGEKHLLTPGEKHLLTQIFRFF 71

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY 149
             ++  V N  +    R     E    L   +  E VH   + +++ ++G+ E E ++ +
Sbjct: 72  TQADIEVNNCYMKHYSRVFKPTEILMMLSAFSNMETVHIAAYSHLLDTVGMPEVE-YSAF 130

Query: 150 REVPSITAKANWALQY 165
            +   +  K ++  Q+
Sbjct: 131 LKYKEMKDKYDYMQQF 146


>gi|238594383|ref|XP_002393469.1| hypothetical protein MPER_06792 [Moniliophthora perniciosa FA553]
 gi|215460986|gb|EEB94399.1| hypothetical protein MPER_06792 [Moniliophthora perniciosa FA553]
          Length = 184

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 2/111 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
             G+  +   ++ +L        L P++Y   W+ Y  A  + W   E+ +  DL  W  
Sbjct: 76  FVGDIELPESEEPLLKESKRRFVLFPIQYPEIWQMYKKAEASFWTAEEMDLSKDLHDWN- 134

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
            N + D+ER  I   L FFA+S+ +V  N+V      +   E R +   Q 
Sbjct: 135 -NRMNDNERHFISHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQI 184


>gi|157825769|ref|YP_001493489.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia akari
           str. Hartford]
 gi|157799727|gb|ABV74981.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia akari
           str. Hartford]
          Length = 327

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 3/130 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA+  + +    HW+P EVP+ DD+  WK    LT  E+ ++ +   FF  ++  
Sbjct: 12  PFSYPWAYTAWHTQQKIHWLPEEVPLADDVKDWKY--NLTPGEKHLLTQIFRFFTQADIE 69

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V N  +    R     E    L   +  E VH   + +++ ++G+ E E ++ + +   +
Sbjct: 70  VNNCYMKHYSRVFKPTEILMMLSAFSNMETVHIAAYSHLLDTVGMPEVE-YSAFLKYKEM 128

Query: 156 TAKANWALQY 165
             K ++  Q+
Sbjct: 129 KDKYDYIQQF 138


>gi|56551339|ref|YP_162178.1| ribonucleotide-diphosphate reductase subunit beta [Zymomonas
           mobilis subsp. mobilis ZM4]
 gi|241760992|ref|ZP_04759081.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|260753042|ref|YP_003225935.1| ribonucleotide-diphosphate reductase subunit beta [Zymomonas
           mobilis subsp. mobilis NCIMB 11163]
 gi|56542913|gb|AAV89067.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241374611|gb|EER64072.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|258552405|gb|ACV75351.1| Ribonucleoside-diphosphate reductase [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 345

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 61/133 (45%), Gaps = 3/133 (2%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
              P +Y WA+E +      HW+P EVP+ +D   W  K  L+D ER ++ +   FF  +
Sbjct: 9   VYKPFEYPWAFEFWQRQQQLHWLPEEVPLGEDCRDWAQK--LSDHERNLLTQIFRFFTQA 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
           +  V +       R     E +  L   +  E VH   + +++ ++G+ E E ++ + + 
Sbjct: 67  DVEVQDCYFDKYGRIFRPTEIKMMLTAFSNMETVHIAAYSHLLDTIGMPETE-YSAFLQY 125

Query: 153 PSITAKANWALQY 165
             +  K ++   +
Sbjct: 126 KEMKDKHDYLATF 138


>gi|56419447|ref|YP_146765.1| ribonucleoside-diphosphate reductase subunit beta [Geobacillus
           kaustophilus HTA426]
 gi|56379289|dbj|BAD75197.1| ribonucleoside-diphosphate reductase beta subunit [Geobacillus
           kaustophilus HTA426]
          Length = 346

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 80/174 (45%), Gaps = 8/174 (4%)

Query: 24  MLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMI 82
           ++N R S+V     + Y WA+ KY     N W P E+ M  D+   K    LTD E+   
Sbjct: 22  IINGRCSNVLNWDDIAYPWAYAKYKRMLANFWTPFEINMAQDV---KQFPQLTDREQDAF 78

Query: 83  KRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL-- 140
            + +G  A  +S+  +     +  ++++P     ++  A +E +H+H++ Y+++SL    
Sbjct: 79  LKIIGLLALLDSIQTD-YAGRVADYITDPSINALMIMLAQQEVIHNHSYSYVLSSLVPKA 137

Query: 141 DEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            + E+F+ +R  P++  + ++    Y      P+     +     ++   L F 
Sbjct: 138 KQDEVFDFWRNEPTLRKRNDFVTNGYKAFAEEPNVENLLRSIVFDVILEGLFFY 191


>gi|118474076|ref|YP_891239.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           fetus subsp. fetus 82-40]
 gi|118413302|gb|ABK81722.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           fetus subsp. fetus 82-40]
          Length = 340

 Score =  141 bits (355), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 72/189 (38%), Gaps = 4/189 (2%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
              I        ++D+++       +      KY WA + +     N W P EV   DD+
Sbjct: 3   RKKIYNPSSNETLNDRKVFGGNPHGILNFTKAKYTWALKLWDLMEANTWFPKEVDTTDDV 62

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             +     LT  E+ M         S +S   NN+   I  +++ PE    L RQA+EEA
Sbjct: 63  RDYA--CNLTTAEKRMYDLVWSQLISMDSFQTNNLADNINPYITAPEINAILARQAYEEA 120

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSR 184
            HS ++  ++ ++  +   ++ M +    +  K ++    Y +     +         + 
Sbjct: 121 NHSKSYAVMVEAICDNTDLIYEMEKYDDVLRKKNDYISSVYEELAGEVTDEKLLLAMVAN 180

Query: 185 ILTRSLRFL 193
            +   + F 
Sbjct: 181 QILEGVYFY 189


>gi|58584525|ref|YP_198098.1| ribonucleotide-diphosphate reductase subunit beta [Wolbachia
           endosymbiont strain TRS of Brugia malayi]
 gi|58418841|gb|AAW70856.1| Ribonucleotide reductase, beta subunit [Wolbachia endosymbiont
           strain TRS of Brugia malayi]
          Length = 331

 Score =  141 bits (355), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 36/141 (25%), Positives = 70/141 (49%), Gaps = 5/141 (3%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA++ +L     HW+P EVP+ DD+  WK K  L + E+ ++ +   FF  ++  
Sbjct: 12  PFNYPWAYDAWLQQQRIHWIPEEVPLADDVKDWKIK--LLNVEKNLLTQIFRFFTQADIE 69

Query: 96  VANNIVLAIYRHLSNP-ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPS 154
           V NN  +  Y ++  P E    L   +  E +H   + Y++ ++G+ E E +  + +  +
Sbjct: 70  V-NNCYMRHYSNIFKPTEICMMLASFSNMETIHIAAYSYLLDTIGMPESE-YQAFLKYDA 127

Query: 155 ITAKANWALQYTQTLSSPSFH 175
           +  K  + L++ ++      H
Sbjct: 128 MRKKYEYMLEFEESKKHDKKH 148


>gi|319942042|ref|ZP_08016361.1| ribonucleoside-diphosphate reductase subunit beta [Sutterella
           wadsworthensis 3_1_45B]
 gi|319804426|gb|EFW01304.1| ribonucleoside-diphosphate reductase subunit beta [Sutterella
           wadsworthensis 3_1_45B]
          Length = 344

 Score =  140 bits (354), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 41/131 (31%), Positives = 69/131 (52%), Gaps = 3/131 (2%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
            +   P +Y WA+E ++ +   HW+ TEVPM +D+  ++ K  LTD ER  + + L FF 
Sbjct: 30  RDYYKPFQYPWAYEAFMQSEQMHWLWTEVPMLEDVKDYQQK--LTDSERDFLTKILRFFT 87

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
             +  V+   V +       PE R  L   A  EAVH   + ++I +LGL E  ++N + 
Sbjct: 88  QGDIDVSGAYVNSYLPRFKQPEVRMMLSSFAAREAVHIAAYSHLIETLGLPES-IYNEFL 146

Query: 151 EVPSITAKANW 161
           +  ++ AK ++
Sbjct: 147 QYEAMAAKHDF 157


>gi|67459102|ref|YP_246726.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia felis
           URRWXCal2]
 gi|67004635|gb|AAY61561.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia felis
           URRWXCal2]
          Length = 327

 Score =  140 bits (354), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 3/130 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA+E + +    HW+P EVP+ DD+  WK    L   E+ ++ +   FF  ++  
Sbjct: 12  PFSYPWAYEAWHTQQKIHWLPEEVPLADDVKDWKY--NLAPGEKHLLTQIFRFFTQADIE 69

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V N  +    R     E    L   +  E VH   + +++ ++G+ E E ++ + +   +
Sbjct: 70  VNNCYMKHYSRVFKPTEILMMLSAFSNMETVHIAAYSHLLDTVGMPEVE-YSAFLKYKEM 128

Query: 156 TAKANWALQY 165
             K ++  Q+
Sbjct: 129 KDKYDYMQQF 138


>gi|222824493|ref|YP_002576067.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           lari RM2100]
 gi|222539714|gb|ACM64815.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           lari RM2100]
          Length = 340

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 74/186 (39%), Gaps = 4/186 (2%)

Query: 10  IQAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           I   +    ++D+++ N     +      KY WA + +     N W P EV    D   +
Sbjct: 6   IYNPKSNETLNDRKVFNGNPHGILNFTKAKYTWALKLWDLMEANTWFPKEVDTTKDALDY 65

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           +    LT  E+ M         S +S   NN+   I  +++ PE    L RQA+EEA HS
Sbjct: 66  R--CNLTVAEKRMYDLVWSQLISMDSFQTNNLADNINPYITAPEINAVLARQAYEEANHS 123

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILT 187
            ++  ++ ++  +   ++ M +   ++  K ++    Y +       +       +  + 
Sbjct: 124 KSYAVMVEAICENTDLIYEMEKHDETLREKNDFISSIYEELAGEVDDNKLLLAMVANQIL 183

Query: 188 RSLRFL 193
             + F 
Sbjct: 184 EGVYFY 189


>gi|15604372|ref|NP_220888.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia
           prowazekii str. Madrid E]
 gi|51473694|ref|YP_067451.1| ribonucleotide-diphosphate reductase subunit beta [Rickettsia typhi
           str. Wilmington]
 gi|3861064|emb|CAA14964.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE BETA CHAIN (nrdB) [Rickettsia
           prowazekii]
 gi|51460006|gb|AAU03969.1| Ribonucleotide reductase [Rickettsia typhi str. Wilmington]
 gi|292572126|gb|ADE30041.1| Ribonucleoside-diphosphate reductase beta chain [Rickettsia
           prowazekii Rp22]
          Length = 324

 Score =  140 bits (353), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 3/130 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA+E + +    HW+P EVP+  D+  WK    LT  E+ ++ +   FF  ++  
Sbjct: 12  PFSYPWAYEAWHTQQKIHWLPEEVPLAYDVKDWKY--NLTPGEKHLLTQIFRFFTQADIE 69

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V N  +    R     E    L   +  E VH   + +++ ++G+ E E ++ + +   +
Sbjct: 70  VNNCYMKHYSRVFKPTEVLMMLSAFSNMETVHIAAYSHLLDTVGMPEVE-YSAFLKYKEM 128

Query: 156 TAKANWALQY 165
             K ++  Q+
Sbjct: 129 KDKYDYMQQF 138


>gi|254455551|ref|ZP_05068980.1| ribonucleoside-diphosphate reductase, beta subunit [Candidatus
           Pelagibacter sp. HTCC7211]
 gi|207082553|gb|EDZ59979.1| ribonucleoside-diphosphate reductase, beta subunit [Candidatus
           Pelagibacter sp. HTCC7211]
          Length = 335

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 65/134 (48%), Gaps = 5/134 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
              P +Y W ++ +L+    HW+P EVP+ DD+  W+    L+  E+ ++ +   FF  +
Sbjct: 25  VYKPFRYPWCYDAWLTQQRIHWLPEEVPLGDDVRDWQK--NLSQSEKNLLTQIFRFFTQA 82

Query: 93  ESLVANNIVLAIYRHLSNP-ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYRE 151
           +  V NN  L  Y  +  P E    +   A  E VH   + +++ ++G+ E E ++ + +
Sbjct: 83  DVEV-NNCYLRHYTTVFKPTEVLMMMTAFAAMETVHVAAYSHLLDTIGMPESE-YSAFMK 140

Query: 152 VPSITAKANWALQY 165
              +  K ++   +
Sbjct: 141 YKEMKDKYDYMQDF 154


>gi|167957419|ref|ZP_02544493.1| ribonucleotide-diphosphate reductase subunit beta [candidate
           division TM7 single-cell isolate TM7c]
          Length = 277

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 3/163 (1%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           D  QL P++Y WA+  Y  A  N W P EV +  DLA +K    LT+DE+  +K  + + 
Sbjct: 16  DGLQLKPVRYEWAYRLYNQAVANTWFPNEVQLVQDLADFKK---LTEDEKNALKTVISYL 72

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY 149
             +E L+  ++   IY  ++  EC  YL +Q +EEA H  TF+YII +   +  E++   
Sbjct: 73  NPNELLINKSLAFGIYPCVNAAECHLYLSKQMWEEANHFMTFEYIIETFPFNREEIYAAG 132

Query: 150 REVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
               S+  KA +  +Y   +            +   +   + +
Sbjct: 133 WGKKSLADKAAFQTKYVTRMMEERPDVTTTEGKKDFVRNLVAY 175


>gi|91763118|ref|ZP_01265082.1| ribonucleotide-diphosphate reductase beta subunit [Candidatus
           Pelagibacter ubique HTCC1002]
 gi|91717531|gb|EAS84182.1| ribonucleotide-diphosphate reductase beta subunit [Candidatus
           Pelagibacter ubique HTCC1002]
          Length = 342

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 62/140 (44%), Gaps = 3/140 (2%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
              P +Y W ++ +L+    HW+P EVP+ DD+  W+    LT  E+ ++ +   FF  +
Sbjct: 32  VYKPFRYPWCYDAWLTQQRIHWLPEEVPLGDDVRDWQK--NLTQSEKNLLTQIFRFFTQA 89

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
           +  V N  +          E    +   A  E VH   + +++ ++G+ E E ++ + + 
Sbjct: 90  DVEVQNCYLRHYTTVFKPTEVLMMMTAFASMETVHIAAYSHLLDTIGMPESE-YSAFMKY 148

Query: 153 PSITAKANWALQYTQTLSSP 172
             +  K ++   +  +    
Sbjct: 149 KEMKDKYDYMQNFDMSSKKD 168


>gi|71083845|ref|YP_266565.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Pelagibacter ubique HTCC1062]
 gi|71062958|gb|AAZ21961.1| ribonucleoside-diphosphate reductase beta chain [Candidatus
           Pelagibacter ubique HTCC1062]
          Length = 337

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 62/140 (44%), Gaps = 3/140 (2%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
              P +Y W ++ +L+    HW+P EVP+ DD+  W+    LT  E+ ++ +   FF  +
Sbjct: 27  VYKPFRYPWCYDAWLTQQRIHWLPEEVPLGDDVRDWQK--NLTQSEKNLLTQIFRFFTQA 84

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
           +  V N  +          E    +   A  E VH   + +++ ++G+ E E ++ + + 
Sbjct: 85  DVEVQNCYLRHYTTVFKPTEVLMMMTAFASMETVHIAAYSHLLDTIGMPESE-YSAFMKY 143

Query: 153 PSITAKANWALQYTQTLSSP 172
             +  K ++   +  +    
Sbjct: 144 KEMKDKYDYMQNFDMSSKKD 163


>gi|257458932|ref|ZP_05624052.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           gracilis RM3268]
 gi|257443636|gb|EEV18759.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           gracilis RM3268]
          Length = 340

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 38/189 (20%), Positives = 71/189 (37%), Gaps = 4/189 (2%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
              I        + D+++       +      KY WA + +     N W P EV   DD+
Sbjct: 3   RKKIYNPFSDETLTDRKVFGGNPQGILNFTKAKYQWALKLWDLMEANTWFPKEVDTTDDV 62

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             +     LT  E+ M         S +S   NN+   I  +++ PE    L RQA+EEA
Sbjct: 63  RDYN--FNLTSAEKRMYDLVWSQLISMDSFQTNNLADNINPYITAPEINAVLARQAYEEA 120

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSR 184
            HS ++  ++ ++  +   ++ M +    +  K ++    Y +     S         + 
Sbjct: 121 NHSKSYAVMVEAICENTDLIYEMEKHDDMLRRKNDYISSVYEELAGEVSDDKLLLAMVAN 180

Query: 185 ILTRSLRFL 193
            +   + F 
Sbjct: 181 QILEGIYFY 189


>gi|138894466|ref|YP_001124919.1| ribonucleoside-diphosphate reductase subunit beta [Geobacillus
           thermodenitrificans NG80-2]
 gi|196247935|ref|ZP_03146637.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. G11MC16]
 gi|134265979|gb|ABO66174.1| Ribonucleoside-diphosphate reductase beta subunit [Geobacillus
           thermodenitrificans NG80-2]
 gi|196212719|gb|EDY07476.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. G11MC16]
          Length = 344

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 79/174 (45%), Gaps = 8/174 (4%)

Query: 24  MLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMI 82
           M+N R S+V     + Y WA+ KY     N W P E+ M  D+   K    LT  E+   
Sbjct: 20  MINGRCSNVLNWDDIAYPWAYAKYKRMLANFWTPFEINMAQDV---KQFPQLTAREQDAF 76

Query: 83  KRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL-- 140
            + +G  A  +S+  +     +  ++++P     ++  A +E +H+H++ Y+++SL    
Sbjct: 77  LKIIGLLALLDSIQTD-YAGRVADYITDPSINALMIMLAQQEVIHNHSYSYVLSSLVPKA 135

Query: 141 DEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            + E+F+ +R  P++  + ++    Y      P+     +     ++   L F 
Sbjct: 136 KQDEVFDFWRNEPTLRKRNDFVTNGYKAFAEKPNVENLLRSIVFDVILEGLFFY 189


>gi|269864629|ref|XP_002651641.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220064151|gb|EED42415.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 277

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 19/137 (13%)

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D   +   + LT +E+  IK  L FFA+S+ +V  N+V      +   E + +   Q
Sbjct: 1   MTFDCEHF---STLTPNEQFFIKYVLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQ 57

Query: 121 AFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYW 177
              E +HS  +  +I +L  D+ E   LFN    +PSI  KA WA ++  +         
Sbjct: 58  IAIENIHSEMYSKLIETLIRDKEEQTYLFNAIENIPSIRKKALWAQKWIAS--------- 108

Query: 178 NKRRRSRILTRSLRFLC 194
                +   TR + F C
Sbjct: 109 ----DTSFDTRCVAFAC 121


>gi|115378653|ref|ZP_01465803.1| ribonucleoside-diphosphate reductase, beta subunit [Stigmatella
           aurantiaca DW4/3-1]
 gi|115364319|gb|EAU63404.1| ribonucleoside-diphosphate reductase, beta subunit [Stigmatella
           aurantiaca DW4/3-1]
          Length = 288

 Score =  139 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 4/123 (3%)

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           +TD ER +I R + FFA+ +S+V NN+VL +Y+HL+ PE R YL RQ +EEA+H   +  
Sbjct: 1   MTDAERHLIHRLVAFFATGDSIVGNNLVLNLYKHLNAPEARMYLSRQLYEEALHVQFYLT 60

Query: 134 IITSLGLDE---GELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSL 190
           ++ +   D     + F     +PSI  KA + L++  ++   +     +  R R L   +
Sbjct: 61  LLDTYVPDPADRAKAFAAIDNIPSIQRKARFCLKWMDSIHDLA-QLKTREDRRRFLLNLI 119

Query: 191 RFL 193
            F 
Sbjct: 120 CFA 122


>gi|239826135|ref|YP_002948759.1| ribonucleoside-diphosphate reductase [Geobacillus sp. WCH70]
 gi|239806428|gb|ACS23493.1| Ribonucleoside-diphosphate reductase [Geobacillus sp. WCH70]
          Length = 346

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 79/175 (45%), Gaps = 8/175 (4%)

Query: 23  RMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           R++N +S +V     + Y WA+ KY     N W P E+ M  D+   K    LT+ E+  
Sbjct: 21  RIINGKSSNVLNWDDIAYPWAYAKYKRMLANFWTPFEINMSQDV---KQFPNLTEREQDA 77

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL- 140
             + +G  A  +S+  +     +  ++++      ++  A +E +H+H++ Y+++SL   
Sbjct: 78  FLKIIGLLALLDSIQTD-YAGRVADYITDSSINALMIMLAQQEVIHNHSYSYVLSSLVPK 136

Query: 141 -DEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
             + E+F  +R  P +  + ++    Y     +P+     K     ++   L F 
Sbjct: 137 SKQDEVFEFWRNEPILRKRNDFVTNGYKAFAENPNVENLLKSIVYDVILEGLFFY 191


>gi|73666936|ref|YP_302952.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia canis
           str. Jake]
 gi|72394077|gb|AAZ68354.1| Ribonucleoside-diphosphate reductase [Ehrlichia canis str. Jake]
          Length = 324

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 70/141 (49%), Gaps = 5/141 (3%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA++ +L     HW+P EVP+ DD+  WK+   L++ E+ ++ +   FF  ++  
Sbjct: 12  PFNYPWAYDAWLCQQRIHWLPEEVPLADDVQDWKT--VLSEKEKNLLVQIFRFFTQADIE 69

Query: 96  VANNIVLAIYRHLSNP-ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPS 154
           V NN  +  Y ++  P E    L   +  E +H   + Y++ ++G+ E E +  + +   
Sbjct: 70  V-NNCYMRHYSNIFKPTEVCMMLAAFSNMETIHIAAYSYLLDTIGMPEIE-YQAFLKFEV 127

Query: 155 ITAKANWALQYTQTLSSPSFH 175
           +  K ++  ++ +   +   H
Sbjct: 128 MKKKYDYMQKFEECRKNDKRH 148


>gi|58617056|ref|YP_196255.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia
           ruminantium str. Gardel]
 gi|58416668|emb|CAI27781.1| Ribonucleoside-diphosphate reductase beta chain [Ehrlichia
           ruminantium str. Gardel]
          Length = 329

 Score =  139 bits (351), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 65/140 (46%), Gaps = 3/140 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA++ +L     HW+P EVP+ DD+  WK+   L+D E+ ++ +   FF  ++  
Sbjct: 17  PFNYPWAYDAWLCQQRIHWLPEEVPLADDVQDWKT--VLSDKEKNLLVQIFRFFTQADIE 74

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V N  +          E    L   +  E +H   + Y++ ++G+ E E +  + +   +
Sbjct: 75  VNNCYMKHYSNIFKPTEICMMLSAFSNMETIHIAAYSYLLDTIGMPEIE-YQAFLKFEVM 133

Query: 156 TAKANWALQYTQTLSSPSFH 175
             K ++  ++ +   +   H
Sbjct: 134 KKKYDYMQRFEECRKNDKRH 153


>gi|295401051|ref|ZP_06811025.1| Ribonucleoside-diphosphate reductase [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|312112173|ref|YP_003990489.1| ribonucleotide reductase [Geobacillus sp. Y4.1MC1]
 gi|294976844|gb|EFG52448.1| Ribonucleoside-diphosphate reductase [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|311217274|gb|ADP75878.1| ribonucleotide reductase [Geobacillus sp. Y4.1MC1]
          Length = 346

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 79/175 (45%), Gaps = 8/175 (4%)

Query: 23  RMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           R++N +S +V     + Y WA+ KY     N W P E+ M  D+   K    LT+ E+  
Sbjct: 21  RIINGKSSNVLNWDDIAYPWAYAKYKRMLANFWTPFEINMSQDV---KQFPLLTEREQDA 77

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL- 140
             + +G  A  +S+  +     +  ++++      ++  A +E +H+H++ Y+++SL   
Sbjct: 78  FLKIIGLLALLDSIQTD-YAGRVADYITDSSINALMIMLAQQEVIHNHSYSYVLSSLVTK 136

Query: 141 -DEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
             + E+F  +R  P +  + ++    Y     +P+     K     ++   L F 
Sbjct: 137 SKQDEVFEFWRNEPILRKRNDFVTNGYKAFAENPNVENLLKSIVYDVILEGLFFY 191


>gi|57239055|ref|YP_180191.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia
           ruminantium str. Welgevonden]
 gi|15811135|gb|AAL08816.1|AF308664_1 hypothetical ribonucleoside reductase beta chain [Ehrlichia
           ruminantium]
 gi|57161134|emb|CAH58047.1| putative ribonucleoside-diphosphate reductase beta chain [Ehrlichia
           ruminantium str. Welgevonden]
          Length = 324

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 65/140 (46%), Gaps = 3/140 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA++ +L     HW+P EVP+ DD+  WK+   L+D E+ ++ +   FF  ++  
Sbjct: 12  PFNYPWAYDAWLCQQRIHWLPEEVPLADDVQDWKT--VLSDKEKNLLVQIFRFFTQADIE 69

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V N  +          E    L   +  E +H   + Y++ ++G+ E E +  + +   +
Sbjct: 70  VNNCYMKHYSNIFKPTEICMMLSAFSNMETIHIAAYSYLLDTIGMPEIE-YQAFLKFEVM 128

Query: 156 TAKANWALQYTQTLSSPSFH 175
             K ++  ++ +   +   H
Sbjct: 129 KKKYDYMQRFEECRKNDKRH 148


>gi|58578998|ref|YP_197210.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia
           ruminantium str. Welgevonden]
 gi|58417624|emb|CAI26828.1| Ribonucleoside-diphosphate reductase beta chain [Ehrlichia
           ruminantium str. Welgevonden]
          Length = 329

 Score =  139 bits (350), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 65/140 (46%), Gaps = 3/140 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA++ +L     HW+P EVP+ DD+  WK+   L+D E+ ++ +   FF  ++  
Sbjct: 17  PFNYPWAYDAWLCQQRIHWLPEEVPLADDVQDWKT--VLSDKEKNLLVQIFRFFTQADIE 74

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V N  +          E    L   +  E +H   + Y++ ++G+ E E +  + +   +
Sbjct: 75  VNNCYMKHYSNIFKPTEICMMLSAFSNMETIHIAAYSYLLDTIGMPEIE-YQAFLKFEVM 133

Query: 156 TAKANWALQYTQTLSSPSFH 175
             K ++  ++ +   +   H
Sbjct: 134 KKKYDYMQRFEECRKNDKRH 153


>gi|88658048|ref|YP_507564.1| ribonucleotide-diphosphate reductase subunit beta [Ehrlichia
           chaffeensis str. Arkansas]
 gi|88599505|gb|ABD44974.1| ribonucleoside-diphosphate reductase, beta subunit [Ehrlichia
           chaffeensis str. Arkansas]
          Length = 324

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 65/140 (46%), Gaps = 3/140 (2%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA++ +L     HW+P EVP+ DD+  WK+   L++ E+ ++ +   FF  ++  
Sbjct: 12  PFNYPWAYDAWLCQQRIHWLPEEVPLADDVQDWKT--VLSEKEKNLLVQIFRFFTQADIE 69

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V N  +          E    L   +  E +H   + Y++ ++G+ E E +  + +   +
Sbjct: 70  VNNCYMKHYSNIFKPTEVCMMLSAFSNMETIHIAAYSYLLDTIGMPEIE-YQAFLKFEVM 128

Query: 156 TAKANWALQYTQTLSSPSFH 175
             K ++  ++ +   +   H
Sbjct: 129 KKKYDYMQRFEECRKNDKRH 148


>gi|315930891|gb|EFV09876.1| ribonucleotide reductase, small chain family protein [Campylobacter
           jejuni subsp. jejuni 305]
          Length = 305

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 72/186 (38%), Gaps = 4/186 (2%)

Query: 10  IQAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           I        + D+++ +     +      KY WA + +     N W P EV    D   +
Sbjct: 6   IYNPSSNETLGDRKVFDGNPHGILNFTKAKYTWALKLWDLMEANTWFPKEVDTTKDALDY 65

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           +    LT  E+ M         S +S   NN+   I  +++ PE    L RQA+EEA HS
Sbjct: 66  R--CNLTAGEKRMYDLVWSQLISMDSFQTNNLADNINPYITAPEINAVLARQAYEEANHS 123

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILT 187
            ++  ++ ++  +   ++ M +   ++  K ++    Y +       +       +  + 
Sbjct: 124 KSYAVMVEAICDNTDLIYEMEKHDETLREKNDFISSIYEELAGDVDDNKLLLAMVANQIL 183

Query: 188 RSLRFL 193
             + F 
Sbjct: 184 EGVYFY 189


>gi|262277047|ref|ZP_06054840.1| ribonucleoside-diphosphate reductase, beta subunit [alpha
           proteobacterium HIMB114]
 gi|262224150|gb|EEY74609.1| ribonucleoside-diphosphate reductase, beta subunit [alpha
           proteobacterium HIMB114]
          Length = 342

 Score =  138 bits (349), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 65/134 (48%), Gaps = 5/134 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
              P +Y W ++ +L+    HW+P E+P+ +D+  W+    LT  E+ ++ +   FF  +
Sbjct: 29  VYKPFRYPWCYDAWLTQQRIHWLPEEIPLAEDVRDWQK--NLTAHEKNLLTQIFRFFTQA 86

Query: 93  ESLVANNIVLAIYRHLSNP-ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYRE 151
           +  V NN  L  Y  +  P E    +   A  E +H   + +++ ++G+ E E ++ + +
Sbjct: 87  DVEV-NNCYLRHYTTVFKPTEVLMMMTAFASMETIHVAAYSHLLDTIGMPESE-YSAFLK 144

Query: 152 VPSITAKANWALQY 165
              +  K ++   +
Sbjct: 145 YKEMKDKYDYMQNF 158


>gi|57505748|ref|ZP_00371674.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           upsaliensis RM3195]
 gi|57016021|gb|EAL52809.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           upsaliensis RM3195]
          Length = 340

 Score =  138 bits (348), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 73/186 (39%), Gaps = 4/186 (2%)

Query: 10  IQAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           I       ++ D+++ +     +      KY WA + +     N W P EV    D   +
Sbjct: 6   IYNPNSNESLSDRKVFSGNPHGILNFTKAKYTWALKLWDLMEANTWFPKEVDTTRDALDY 65

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           +    LT  E+ M         S +S   NN+   I  +++ PE    L RQA+EEA HS
Sbjct: 66  R--CHLTAAEKRMYDLVWSQLISMDSFQTNNLADNINPYITAPEINAVLARQAYEEANHS 123

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILT 187
            ++  ++ ++  +   ++ M +   ++  K ++    Y +       +       +  + 
Sbjct: 124 KSYAVMVETICDNTDLIYEMEKHDATLREKNDFISGIYEELAGDVDDNKLLLAMVANQIL 183

Query: 188 RSLRFL 193
             + F 
Sbjct: 184 EGVYFY 189


>gi|153952438|ref|YP_001397460.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. doylei 269.97]
 gi|152939884|gb|ABS44625.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. doylei 269.97]
          Length = 340

 Score =  138 bits (348), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 72/190 (37%), Gaps = 4/190 (2%)

Query: 6   GLSPIQAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
               I        + D+++ +     +      KY WA + +     N W P EV    D
Sbjct: 2   QRKKIYNPSSNETLGDRKVFDGNPHGILNFTKAKYTWALKLWDLMEANTWFPKEVDTTKD 61

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
              ++    LT  E+ M         S +S   NN+   I  +++ PE    L RQA+EE
Sbjct: 62  ALDYR--CNLTAGEKRMYDLVWSQLISMDSFQTNNLADNINPYITAPEINAVLARQAYEE 119

Query: 125 AVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRS 183
           A HS ++  ++ ++  +   ++ M +   ++  K ++    Y +       +       +
Sbjct: 120 ANHSKSYAVMVEAICDNTDLIYEMEKHDETLREKNDFISSIYEELAGDVDDNKLLLAMVA 179

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 180 NQILEGVYFY 189


>gi|156847976|ref|XP_001646871.1| hypothetical protein Kpol_2002p84 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117552|gb|EDO19013.1| hypothetical protein Kpol_2002p84 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 351

 Score =  138 bits (348), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 63/154 (40%), Gaps = 5/154 (3%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           D+ +L        L P+KY   ++ Y       W   E+    D+  W   + +T DE+ 
Sbjct: 25  DESILTENKRRFVLFPIKYHEIYDAYKKREALFWTAEELDFSKDIQNWND-DKITKDEKE 83

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
              R L  FAS++     N+   +      PE + +   Q   + +H   +  +I SL  
Sbjct: 84  YFIRLLALFASNDMD-RENLTEHLSAECQTPEAKCFYGFQIMVDNIHQEVYGILIDSLVK 142

Query: 141 DEGELFNMYREVP---SITAKANWALQYTQTLSS 171
           D+ +  +M+ E+    +I  K  +A  + +   +
Sbjct: 143 DDEKRTSMFEEIKDLTNIKEKIEYAKSWFENEDN 176


>gi|86149605|ref|ZP_01067835.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni CF93-6]
 gi|86151167|ref|ZP_01069382.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 260.94]
 gi|86153704|ref|ZP_01071907.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni HB93-13]
 gi|88597173|ref|ZP_01100408.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 84-25]
 gi|121613260|ref|YP_999944.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. jejuni 81-176]
 gi|157414529|ref|YP_001481785.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. jejuni 81116]
 gi|167004901|ref|ZP_02270659.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni 81-176]
 gi|218561895|ref|YP_002343674.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|283955655|ref|ZP_06373148.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 1336]
 gi|315123818|ref|YP_004065822.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           jejuni subsp. jejuni ICDCCJ07001]
 gi|85839873|gb|EAQ57132.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni CF93-6]
 gi|85841514|gb|EAQ58761.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 260.94]
 gi|85842665|gb|EAQ59877.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni HB93-13]
 gi|87250215|gb|EAQ73173.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 81-176]
 gi|88190234|gb|EAQ94208.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 84-25]
 gi|112359601|emb|CAL34386.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|157385493|gb|ABV51808.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni 81116]
 gi|283792880|gb|EFC31656.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 1336]
 gi|284925507|gb|ADC27859.1| ribonucleoside-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. jejuni IA3902]
 gi|307747171|gb|ADN90441.1| Ribonucleoside-diphosphate reductase subunit beta [Campylobacter
           jejuni subsp. jejuni M1]
 gi|315017540|gb|ADT65633.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           jejuni subsp. jejuni ICDCCJ07001]
 gi|315928159|gb|EFV07477.1| ribonucleotide reductase, small chain family protein [Campylobacter
           jejuni subsp. jejuni DFVF1099]
 gi|315932030|gb|EFV10983.1| ribonucleotide reductase, small chain family protein [Campylobacter
           jejuni subsp. jejuni 327]
          Length = 340

 Score =  138 bits (347), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 72/186 (38%), Gaps = 4/186 (2%)

Query: 10  IQAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           I        + D+++ +     +      KY WA + +     N W P EV    D   +
Sbjct: 6   IYNPSSNETLGDRKVFDGNPHGILNFTKAKYTWALKLWDLMEANTWFPKEVDTTKDALDY 65

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           +    LT  E+ M         S +S   NN+   I  +++ PE    L RQA+EEA HS
Sbjct: 66  R--CNLTAGEKRMYDLVWSQLISMDSFQTNNLADNINPYITAPEINAVLARQAYEEANHS 123

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILT 187
            ++  ++ ++  +   ++ M +   ++  K ++    Y +       +       +  + 
Sbjct: 124 KSYAVMVEAICDNTDLIYEMEKHDETLREKNDFISSIYEELAGDVDDNKLLLAMVANQIL 183

Query: 188 RSLRFL 193
             + F 
Sbjct: 184 EGVYFY 189


>gi|237678830|emb|CAQ57557.1| NrdB protein [Bradyrhizobium elkanii]
          Length = 360

 Score =  138 bits (347), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 2/128 (1%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           +Y WA+E +      HWM  EVP+  DL  W S + +TD ER ++ +   FF  S+  V 
Sbjct: 36  RYAWAYEFWKRQQQTHWMGEEVPLGADLKDWAS-DRVTDSERALLTQIFRFFTQSDIEVG 94

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
           +N +            +  +      E VH   +  ++ +LG+ + E F  +R    + A
Sbjct: 95  DNYLKRYIPIFQPLTVQMMMAAFTNMETVHIDAYALLLKTLGMPKTE-FEAFRGYSEMRA 153

Query: 158 KANWALQY 165
           KA++  ++
Sbjct: 154 KADYMHEF 161


>gi|88607783|ref|YP_505152.1| ribonucleotide-diphosphate reductase subunit beta [Anaplasma
           phagocytophilum HZ]
 gi|88598846|gb|ABD44316.1| ribonucleoside-diphosphate reductase, beta subunit [Anaplasma
           phagocytophilum HZ]
          Length = 323

 Score =  138 bits (347), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 68/136 (50%), Gaps = 5/136 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
              P  Y WA++ +L     HW+P EVP+ DD+  WK+   L++ E+ ++ +   FF  +
Sbjct: 9   VYKPFDYPWAYDAWLCQQRIHWLPEEVPLADDVQDWKTM--LSEKEKNLLVQIFRFFTQA 66

Query: 93  ESLVANNIVLAIYRHLSNP-ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYRE 151
           +  V NN  +  Y ++  P E    L   +  E +H   + Y++ ++G+ E E +  + +
Sbjct: 67  DIEV-NNCYMKHYSNIFRPTEICMMLSAFSNMETIHVAAYSYLLDTIGMPEVE-YQAFLK 124

Query: 152 VPSITAKANWALQYTQ 167
              +  K ++  ++ +
Sbjct: 125 FEVMKKKYDYMQRFEE 140


>gi|283955349|ref|ZP_06372848.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 414]
 gi|283793109|gb|EFC31879.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni subsp. jejuni 414]
          Length = 340

 Score =  137 bits (346), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 73/186 (39%), Gaps = 4/186 (2%)

Query: 10  IQAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           I        + D+++ +     +      KY WA + +     N W P EV    D   +
Sbjct: 6   IYNPSSNETLGDRKVFDGNPHGILNFTKAKYTWALKLWDLMEANTWFPKEVDTTKDALDY 65

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           +    LT  E+ M         S +S  +NN+   I  +++ PE    L RQA+EEA HS
Sbjct: 66  R--CNLTAGEKRMYDLVWSQLISMDSFQSNNLADNINPYITAPEINAVLARQAYEEANHS 123

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILT 187
            ++  ++ ++  +   ++ M +   ++  K ++    Y +       +       +  + 
Sbjct: 124 KSYAVMVEAICDNTDLIYEMEKHDETLREKNDFISSIYEELAGDVDDNKLLLAMVANQIL 183

Query: 188 RSLRFL 193
             + F 
Sbjct: 184 EGVYFY 189


>gi|330998673|ref|ZP_08322403.1| ribonucleoside-diphosphate reductase, beta subunit [Parasutterella
           excrementihominis YIT 11859]
 gi|329576534|gb|EGG58042.1| ribonucleoside-diphosphate reductase, beta subunit [Parasutterella
           excrementihominis YIT 11859]
          Length = 327

 Score =  137 bits (346), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 3/131 (2%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
            N   P  Y WA++ ++++   HW+ TEVPM +D+  WK  N LTD ER  + +   FF 
Sbjct: 9   RNYYKPFSYPWAYDAFMASEQMHWLWTEVPMIEDIKDWK--NVLTDGERDFLTKVFRFFT 66

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
             +  V++  V         PE R  L   A  EAVH   + ++I ++G+ E  ++N + 
Sbjct: 67  QGDIDVSSAYVNTYLPFFPTPEIRMMLSSFAAREAVHIAAYSHLIETIGMPET-VYNEFL 125

Query: 151 EVPSITAKANW 161
           +  ++  K ++
Sbjct: 126 QYEAMAEKHDF 136


>gi|303258316|ref|ZP_07344319.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderiales
           bacterium 1_1_47]
 gi|302858762|gb|EFL81850.1| ribonucleoside-diphosphate reductase, beta subunit [Burkholderiales
           bacterium 1_1_47]
          Length = 328

 Score =  137 bits (346), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 39/131 (29%), Positives = 67/131 (51%), Gaps = 3/131 (2%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
            N   P  Y WA++ ++++   HW+ TEVPM +D+  WK  N LTD ER  + +   FF 
Sbjct: 10  RNYYKPFSYPWAYDAFMASEQMHWLWTEVPMIEDIKDWK--NVLTDGERDFLTKVFRFFT 67

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
             +  V++  V         PE R  L   A  EAVH   + ++I ++G+ E  ++N + 
Sbjct: 68  QGDIDVSSAYVNTYLPFFPTPEIRMMLSSFAAREAVHIAAYSHLIETIGMPET-VYNEFL 126

Query: 151 EVPSITAKANW 161
           +  ++  K ++
Sbjct: 127 QYEAMAEKHDF 137


>gi|205356539|ref|ZP_03223302.1| ribonucleoside diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni CG8421]
 gi|205345544|gb|EDZ32184.1| ribonucleoside diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni CG8421]
          Length = 340

 Score =  137 bits (346), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 72/186 (38%), Gaps = 4/186 (2%)

Query: 10  IQAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           I        + D+++ +     +      KY WA + +     N W P EV    D   +
Sbjct: 6   IYNPSSNETLGDRKIFDGNPHGILNFTKAKYTWALKLWDLMEANTWFPKEVDTTKDALDY 65

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           +    LT  E+ M         S +S   NN+   I  +++ PE    L RQA+EEA HS
Sbjct: 66  R--CNLTVGEKRMYDLVWSQLISMDSFQTNNLADNINPYITAPEINAVLARQAYEEANHS 123

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILT 187
            ++  ++ ++  +   ++ M +   ++  K ++    Y +       +       +  + 
Sbjct: 124 KSYAVMVEAICDNTDLIYEMEKHDETLREKNDFISSIYEELAGDVDDNKLLLAMVANQIL 183

Query: 188 RSLRFL 193
             + F 
Sbjct: 184 EGVYFY 189


>gi|57168357|ref|ZP_00367491.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           coli RM2228]
 gi|305432773|ref|ZP_07401932.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           coli JV20]
 gi|57020165|gb|EAL56839.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           coli RM2228]
 gi|304444170|gb|EFM36824.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           coli JV20]
          Length = 340

 Score =  137 bits (345), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 72/186 (38%), Gaps = 4/186 (2%)

Query: 10  IQAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           I        + D+++ +     +      KY WA + +     N W P EV    D   +
Sbjct: 6   IYNPGSNETLTDRKVFSGNPHGILNFTKAKYTWALKLWDLMEANTWFPKEVDTTKDALDY 65

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           +    LT  E+ M         S +S   NN+   I  +++ PE    L RQA+EEA HS
Sbjct: 66  R--CNLTAGEKRMYDLVWSQLISMDSFQTNNLADNINPYITAPEINAVLARQAYEEANHS 123

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILT 187
            ++  ++ ++  +   ++ M +   ++  K ++    Y +       +       +  + 
Sbjct: 124 KSYAVMVEAICDNTDLIYEMEKHDETLREKNDFISSIYEELAGDVDDNKLLLAMVANQIL 183

Query: 188 RSLRFL 193
             + F 
Sbjct: 184 EGVYFY 189


>gi|330814259|ref|YP_004358498.1| ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487354|gb|AEA81759.1| ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Candidatus Pelagibacter sp. IMCC9063]
          Length = 345

 Score =  137 bits (345), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 36/165 (21%), Positives = 73/165 (44%), Gaps = 13/165 (7%)

Query: 10  IQAGEKRVNVDDKRMLNAR--------SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           +    K   V  K ++ A          +     P +Y W ++ +L+    HW+P EVP+
Sbjct: 1   MSVAPKVPEVQAKTIIGANYCEEEGLLKEKIVYKPFRYPWCYDAWLTQQRIHWLPEEVPL 60

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP-ECRQYLLRQ 120
            +D+  W+ K  L   E+ ++ +   FF  ++  V NN  L  Y  +  P E    +   
Sbjct: 61  AEDVRDWQKK--LLPHEKNLLTQIFRFFTQADVEV-NNCYLRHYTTVFKPTEVLMMMTAF 117

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQY 165
           A  E VH   + +++ ++G+ E E ++ + +   +  K ++   +
Sbjct: 118 ASMETVHVAAYSHLLDTIGMPETE-YSAFLKYKEMKDKYDYMQNF 161


>gi|57237291|ref|YP_178304.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           jejuni RM1221]
 gi|148926379|ref|ZP_01810063.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni CG8486]
 gi|57166095|gb|AAW34874.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           jejuni RM1221]
 gi|145844771|gb|EDK21876.1| ribonucleoside-diphosphate reductase beta chain [Campylobacter
           jejuni subsp. jejuni CG8486]
 gi|315057661|gb|ADT71990.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Campylobacter jejuni subsp. jejuni S3]
          Length = 340

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 72/186 (38%), Gaps = 4/186 (2%)

Query: 10  IQAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           I        + D+++ +     +      KY WA + +     N W P EV    D   +
Sbjct: 6   IYNPNSNETLGDRKIFDGNPHGILNFTKAKYTWALKLWDLMEANTWFPKEVDTTKDALDY 65

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           +    LT  E+ M         S +S   NN+   I  +++ PE    L RQA+EEA HS
Sbjct: 66  R--CNLTVGEKRMYDLVWSQLISMDSFQTNNLADNINPYITAPEINAVLARQAYEEANHS 123

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILT 187
            ++  ++ ++  +   ++ M +   ++  K ++    Y +       +       +  + 
Sbjct: 124 KSYAVMVEAICDNTDLIYEMEKHDETLREKNDFISSIYEELAGDVDDNKLLLAMVANQIL 183

Query: 188 RSLRFL 193
             + F 
Sbjct: 184 EGVYFY 189


>gi|154149104|ref|YP_001405803.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           hominis ATCC BAA-381]
 gi|153805113|gb|ABS52120.1| ribonucleoside-diphosphate reductase, beta subunit [Campylobacter
           hominis ATCC BAA-381]
          Length = 340

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 74/189 (39%), Gaps = 4/189 (2%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
              I        + ++++ +     +      KY WA + +     N W P EV   DD+
Sbjct: 3   RKKIYNPFSNETLTERKIFSGNPQGILNFTKAKYVWALKLWDIMEANTWFPREVDTTDDV 62

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             +     LT  E+ M +       S +S   NN+   I  +++ PE    L RQA+EEA
Sbjct: 63  RDYN--FNLTPAEKRMYELVWSQLISMDSFQTNNLADNINPYITAPEINAILARQAYEEA 120

Query: 126 VHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSR 184
            HS ++  ++ ++  +  +++ M +    +  K ++    Y +       +       + 
Sbjct: 121 NHSKSYAVMVEAICQNTDQIYEMEKFDDVLREKNDYISSIYEELAGEVDENKLLLAMVAN 180

Query: 185 ILTRSLRFL 193
            +   + F 
Sbjct: 181 QILEGIYFY 189


>gi|27375117|ref|NP_766646.1| ribonucleotide-diphosphate reductase subunit beta [Bradyrhizobium
           japonicum USDA 110]
 gi|27348253|dbj|BAC45271.1| ribonucleoside-diphosphate reductase beta subunit [Bradyrhizobium
           japonicum USDA 110]
          Length = 360

 Score =  136 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 2/128 (1%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           +Y WA+E +      HWM  EVP+  DL  W S   +TD ER ++ +   FF  S+  V 
Sbjct: 36  RYAWAYEFWKRQQQTHWMGEEVPLGADLNDWAS-GRVTDSERALLTQIFRFFTQSDIEVG 94

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
           +N              +  +      E VH   +  ++ +LG+ + E F  +R    + A
Sbjct: 95  DNYFKRYIPIFQPLTVQMMMAAFTNMETVHIDAYALLLKTLGMPKTE-FEAFRGYAQMRA 153

Query: 158 KANWALQY 165
           KA++  ++
Sbjct: 154 KADYMHEF 161


>gi|315637824|ref|ZP_07893014.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           upsaliensis JV21]
 gi|315482065|gb|EFU72679.1| ribonucleotide-diphosphate reductase beta subunit [Campylobacter
           upsaliensis JV21]
          Length = 340

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 73/186 (39%), Gaps = 4/186 (2%)

Query: 10  IQAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           I       ++ D+++ +     +      KY WA + +     N W P EV    D   +
Sbjct: 6   IYNPNSNESLGDRKVFSGNPHGILNFTKAKYTWALKLWDLMEANTWFPKEVDTTRDALDY 65

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           +    LT  E+ M         S +S   NN+   I  +++ PE    L RQA+EEA HS
Sbjct: 66  R--CNLTAAEKRMYDLVWSQLISMDSFQTNNLADNINPYITAPEINAVLARQAYEEANHS 123

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILT 187
            ++  ++ ++  +   ++ M +   ++  K ++    Y +       +       +  + 
Sbjct: 124 KSYAVMVEAICDNTDLIYEMEKHDATLREKNDFISGIYEELAGDVDDNKLLLAMVANQIL 183

Query: 188 RSLRFL 193
             + F 
Sbjct: 184 EGVYFY 189


>gi|117530173|ref|YP_851016.1| ribonucleoside-diphosphate reductase beta subunit [Microcystis
           phage Ma-LMM01]
 gi|86990305|dbj|BAE79256.1| ribonucleoside-diphosphate reductase beta subunit [Microcystis
           phage Ma-LMM01]
 gi|117165785|dbj|BAF36093.1| ribonucleoside-diphosphate reductase beta subunit [Microcystis
           phage Ma-LMM01]
 gi|124270949|dbj|BAF45776.1| ribonucleoside-diphosphate reductase beta subunit [Cyanophage
           Ma-LMM02]
 gi|124270951|dbj|BAF45777.1| ribonucleoside-diphosphate reductase beta subunit [Cyanophage
           Ma-LMM03]
 gi|124270953|dbj|BAF45778.1| ribonucleoside-diphosphate reductase beta subunit [Cyanophage
           Ma-HPM05]
          Length = 348

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 73/190 (38%), Gaps = 8/190 (4%)

Query: 7   LSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           L PI       +   +R+     +++  L  +KY WA   +     N W+P    +  D+
Sbjct: 5   LPPIFNPSGDDSPQKRRLFGGNPTNIINLKDVKYKWASHLFTEMRANIWIPQATDLTPDI 64

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
               +   +  + R      L +    +SL    + L +   ++ PE    +  Q  +E 
Sbjct: 65  N---NYVTMPPNMRRAFDGMLSYLTFLDSLQTRVLPL-LMPVITAPEVSICMGEQLSQEQ 120

Query: 126 VHSHTFQYIITSLGL--DEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRR 182
           VHS ++ YII ++        ++ ++RE P +  +  +    Y + +   +   +     
Sbjct: 121 VHSQSYAYIIETVIPTDKRDYIYELWREDPVLLKRCEYIQNLYDRYIHEMTMENYTISMV 180

Query: 183 SRILTRSLRF 192
           S  L   + F
Sbjct: 181 SDFLLEGIYF 190


>gi|67921622|ref|ZP_00515140.1| Ribonucleoside-diphosphate reductase [Crocosphaera watsonii WH
           8501]
 gi|67856734|gb|EAM51975.1| Ribonucleoside-diphosphate reductase [Crocosphaera watsonii WH
           8501]
          Length = 321

 Score =  135 bits (341), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 67/163 (41%), Gaps = 7/163 (4%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
             ++Y WA   Y     N W+P  + +  D+  +     LTDDER      L +    +S
Sbjct: 9   NDVRYTWAVGLYQQMRENFWIPQRLDITQDVTDY---GNLTDDERYAYDGILSYLTFLDS 65

Query: 95  LVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREV 152
           +   NI   +   ++ PE    +  Q  +E +H+ ++QY+I ++   E   +++  +R  
Sbjct: 66  VQTCNIP-HLKTSITAPEISLCMAEQISQEGMHNQSYQYLIETIIPPERRTQVYEFWRTD 124

Query: 153 PSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             +  +  +  + Y + +   +   +     +  L   L F  
Sbjct: 125 KLLRDRCEFIAKLYQKYIDDATTENYFIALMADFLLEGLYFYN 167


>gi|289548460|ref|YP_003473448.1| ribonucleoside-diphosphate reductase [Thermocrinis albus DSM 14484]
 gi|289182077|gb|ADC89321.1| Ribonucleoside-diphosphate reductase [Thermocrinis albus DSM 14484]
          Length = 342

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 43/189 (22%), Positives = 84/189 (44%), Gaps = 8/189 (4%)

Query: 10  IQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSA-CNNHWMPTEVPMQDDLAL 67
           I   E       +R++    +++ +L  +KY WA++ Y +    N W+P E+ M +D   
Sbjct: 6   IFNPEGDREASKRRIIKGNPTNIMELNNVKYQWAFDLYKTMGFTNFWIPEEISMMEDRKQ 65

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           ++    L+  E+   +  L F  + +S    N++    R L+ PE    +  Q F+EA+H
Sbjct: 66  YE--RVLSAHEKRAYEMVLSFLIALDSYQV-NMLKEFARFLTAPELTMAITAQEFQEALH 122

Query: 128 SHTFQYIITSLGLD--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSR 184
           S+++Q+I+ S+       E++N +RE   +  +       Y   +       + K     
Sbjct: 123 SYSYQFILESVVDPVKADEIYNYWREDKVLMERNRVIADLYNDFVRKQDEETFLKAVFGN 182

Query: 185 ILTRSLRFL 193
            +  SL F 
Sbjct: 183 YVLESLYFY 191


>gi|15079087|ref|NP_149839.1| 376L [Invertebrate iridescent virus 6]
 gi|82012049|sp|Q91FE8|RIR2_IIV6 RecName: Full=Probable ribonucleoside-diphosphate reductase small
           subunit 376L; AltName: Full=Ribonucleotide reductase
           small subunit
 gi|15042456|gb|AAK82236.1|AF303741_377 376L [Invertebrate iridescent virus 6]
          Length = 360

 Score =  134 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 7/140 (5%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
            N   P  Y   + K+     +HW+P+EVPM DD+  WK  N L D++R  +     FF 
Sbjct: 7   RNYYKPFTYPEFYNKWDKHEKSHWLPSEVPMHDDVNDWK--NRLNDNQRDFLTNIFRFFT 64

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL--FNM 148
             +  VA+            PE    +   A  E VH   + Y++ +LG+ E     F M
Sbjct: 65  QGDVDVASAYYTQYLPFFKLPEVTMMMGGFAGREGVHIDAYSYLLETLGMPEATYKEFLM 124

Query: 149 YREVPSITAKANWALQYTQT 168
           Y E+     K ++  +++ +
Sbjct: 125 YEEM---KDKQDYIKKFSDS 141


>gi|51891459|ref|YP_074150.1| ribonucleoside-diphosphate reductase beta subunit [Symbiobacterium
           thermophilum IAM 14863]
 gi|51855148|dbj|BAD39306.1| ribonucleoside-diphosphate reductase beta subunit [Symbiobacterium
           thermophilum IAM 14863]
          Length = 346

 Score =  134 bits (338), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 86/188 (45%), Gaps = 8/188 (4%)

Query: 10  IQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           +       +   +R++    +++ +L  +KY WA +       N W+P EVP+ DD   +
Sbjct: 10  LFNEHGERDWGKRRIIGGNPTNIMELTNVKYEWAQKLSDIMLRNFWIPEEVPLLDDAKQY 69

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
                LT DE+    R L F    +S++  ++   +  +++ PE    L    F EA+HS
Sbjct: 70  ---LELTADEQWAYDRMLSFVIFMDSILTVSMP-NLINYVTAPEINMCLSIHNFHEALHS 125

Query: 129 HTFQYIITSLGLDEGE--LFNMYREVPSITAKANW-ALQYTQTLSSPSFHYWNKRRRSRI 185
            ++ Y++ S+   E    +++++RE   +  +  + A  +     +P+  ++ +   ++ 
Sbjct: 126 KSYGYVLESVVPAERRQYIYDLWREDRQLLERNRYIANTFQLFADNPTDEHFVRACMAQY 185

Query: 186 LTRSLRFL 193
           +   + F 
Sbjct: 186 VLEGIYFY 193


>gi|323143005|ref|ZP_08077711.1| ribonucleoside-diphosphate reductase, beta subunit [Succinatimonas
           hippei YIT 12066]
 gi|322417199|gb|EFY07827.1| ribonucleoside-diphosphate reductase, beta subunit [Succinatimonas
           hippei YIT 12066]
          Length = 331

 Score =  134 bits (338), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 43/147 (29%), Positives = 74/147 (50%), Gaps = 4/147 (2%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K  N+ +KR L  +S  +   P  Y WA+E ++ +   HW+ TEVPM +D+  WK    L
Sbjct: 2   KVKNMTEKRNLLTQS-RDYYKPFVYPWAYEAFMQSEQMHWLWTEVPMVEDVKDWK--MRL 58

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            D+ER  + +   FF   +  V++  V         PE R  L   A  EAVH   + ++
Sbjct: 59  NDNERDFLTKVFRFFTQGDIDVSSAYVHTYLPAFPQPEIRMMLSSFAAREAVHIAAYSHL 118

Query: 135 ITSLGLDEGELFNMYREVPSITAKANW 161
           I ++G+ +  ++N + +  ++ AK  +
Sbjct: 119 IETIGMPDA-IYNEFLQYEAMAAKHEF 144


>gi|291239432|ref|XP_002739627.1| PREDICTED: hCG23833-like [Saccoglossus kowalevskii]
          Length = 309

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 70/162 (43%), Gaps = 12/162 (7%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPM-QDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
           P+K    ++ +       W   E+ +   DL  W     LT DER   K  LGFFAS+  
Sbjct: 8   PIKNLDLYDMWKKHVRCFWTKDEINITSSDLREWND---LTPDERQFFKCILGFFASTNI 64

Query: 95  LVANNIVLAIYRHLSNP-ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG---ELFNMYR 150
           +V++N+ L      +   E R +   Q   E +HS T+  ++T+   +E    EL     
Sbjct: 65  IVSDNLALRFLADPNISREARCFYSFQIAMENIHSETYIELLTAYVPEEKERNELLYSII 124

Query: 151 EVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             P +  K+ WA+++     +  F  + +R  +  +   + F
Sbjct: 125 SWPCLNVKSRWAVKWM----NDEFATYAERLVAFAVVEGIMF 162


>gi|281207436|gb|EFA81619.1| hypothetical protein PPL_05610 [Polysphondylium pallidum PN500]
          Length = 1292

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 33/137 (24%), Positives = 54/137 (39%), Gaps = 18/137 (13%)

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           + +D+  W+ K  L D+ER +I   LGFF S   ++  NI+      +  PE R +   Q
Sbjct: 60  LLNDVRDWQCK--LDDNERYLISNILGFFVSIAGIINENIITHFMSEVQIPEARTFYSMQ 117

Query: 121 AFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYW 177
              E + S  +  +I +   D  E   +FN    +P +  K  W L+      S      
Sbjct: 118 IAMENIQSEKYSLLIDAYIKDTDEKSKIFNAIESIPCVKRKCEWLLKSMNNSKS------ 171

Query: 178 NKRRRSRILTRSLRFLC 194
                  +  R + F  
Sbjct: 172 -------LAERLIAFAA 181


>gi|239502693|ref|ZP_04662003.1| ribonucleotide-diphosphate reductase subunit beta [Acinetobacter
           baumannii AB900]
          Length = 309

 Score =  132 bits (332), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 4/160 (2%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           + P+K+ WA        NN W P  V M DD+A   S N L   +R M  + L F ++ +
Sbjct: 3   ISPMKHTWAKGILDRMENNTWFPHVVNMADDVA---SYNRLNAADRFMFDKALAFLSNLD 59

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVP 153
            +  NNI   I +H+++PE    L RQA+EEA+H  ++  II ++ LD   ++  +    
Sbjct: 60  GIQFNNINQNIAKHVTSPEVSMCLSRQAWEEALHVKSYATIIETVSLDPMSVYMTFERDG 119

Query: 154 SITAKANWALQYTQTL-SSPSFHYWNKRRRSRILTRSLRF 192
            +  K  + L+ ++ L    S   +     S +L   + F
Sbjct: 120 LLAQKNQFILKQSRLLGEKFSAEGFALSCVSNVLLEGVYF 159


>gi|332184137|gb|AEE26391.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Francisella cf. novicida 3523]
          Length = 410

 Score =  132 bits (332), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 2/129 (1%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA +  +     HW+  E+ + +D+  WK+   +T  E+  I   L  F  S+  
Sbjct: 102 PFNYPWAVDLTVKHEKAHWIEDEIDLSEDVTDWKN-GKITKVEKEYITNILRLFTQSDVA 160

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V  N          N E R  L   A  E +H   +  +  +LGL + E ++ + E  ++
Sbjct: 161 VGQNYYDQFIPLFKNNEVRNMLGSFAAREGIHQRAYALLNDTLGLPDSE-YHAFLEYKAM 219

Query: 156 TAKANWALQ 164
           T K ++ + 
Sbjct: 220 TDKIDFMMD 228


>gi|88608725|ref|YP_506404.1| ribonucleotide-diphosphate reductase subunit beta [Neorickettsia
           sennetsu str. Miyayama]
 gi|88600894|gb|ABD46362.1| ribonucleoside-diphosphate reductase, beta subunit [Neorickettsia
           sennetsu str. Miyayama]
          Length = 322

 Score =  132 bits (332), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 63/163 (38%), Gaps = 5/163 (3%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
                P +Y WA++ +      HW+P E+PM DD+  W  K   T  E+ ++ +   FF 
Sbjct: 7   RLSYKPFQYDWAYQAWEIQQKIHWLPEEIPMADDVQDWHHKICGT--EKNLLTQIFRFFT 64

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
            ++  V +  +         PE    L   A  E +H   + +++ ++G+ E E +  + 
Sbjct: 65  QADVEVHDCYMRHYAGVFKPPEVCMMLTAFANMETIHIAAYAHLLDTVGMPETE-YLAFT 123

Query: 151 EVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           +   +  K  +   +   + +P+                  F 
Sbjct: 124 KYKQMKEKCEYLKAF--KMDNPTEIAKTLAVYGAFTEGLQLFA 164


>gi|134301991|ref|YP_001121960.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|134049768|gb|ABO46839.1| biofunctional glutaredoxin 3 protein/Ribonucleoside-diphosphate
           reductase beta subunit [Francisella tularensis subsp.
           tularensis WY96-3418]
          Length = 410

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 2/129 (1%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA +  +     HW+  E+ + +D+  WK+   +T  E+  I   L  F  S+  
Sbjct: 102 PFNYPWAVDLTVKHEKAHWIEDEIDLSEDVTDWKN-GKITKVEKEYITNILRLFTQSDVA 160

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V  N          N E R  L   A  E +H   +  +  +LGL + E ++ + E  ++
Sbjct: 161 VGQNYYDQFIPLFKNNEIRNMLGSFAAREGIHQRAYALLNDTLGLPDSE-YHAFLEYKAM 219

Query: 156 TAKANWALQ 164
           T K ++ + 
Sbjct: 220 TDKIDFMMD 228


>gi|317130866|ref|YP_004097148.1| ribonucleotide reductase [Bacillus cellulosilyticus DSM 2522]
 gi|315475814|gb|ADU32417.1| ribonucleotide reductase [Bacillus cellulosilyticus DSM 2522]
          Length = 345

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 81/179 (45%), Gaps = 7/179 (3%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           N   + +    S+V     +++ WA+  Y +   N W P E+ M +D+  +   + L   
Sbjct: 16  NASTRIINGESSNVLNWDDVRFKWAYPLYKNMLANFWTPFEINMGNDVKQY---DKLEPK 72

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           ER    + +G  A  +S+  +   + + R+L++      +   +F+E VH+ ++ Y+++S
Sbjct: 73  EREAFDKIIGLLAFLDSIQTD-YSMHVARYLTDSSLSALMTVLSFQEVVHNQSYSYVLSS 131

Query: 138 LGL--DEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           L     + E+F  ++    +  + ++  + Y   +S+P+   +       I+   L F 
Sbjct: 132 LTTKAKQDEIFEYWKHDKVLRERNDFIAEGYEAFVSNPTPETFLHSIVYDIILEGLNFY 190


>gi|167462363|ref|ZP_02327452.1| ribonucleoside-diphosphate reductase beta subunit [Paenibacillus
           larvae subsp. larvae BRL-230010]
          Length = 343

 Score =  131 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 79/171 (46%), Gaps = 6/171 (3%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
              S+V      ++ WA+  Y +   N W+P EVPM  D+  W +   L D ER   K+ 
Sbjct: 21  GQSSNVLNWDDCRFPWAYPMYRNMLRNFWIPDEVPMTADIKQWST--ELGDHERDTFKKV 78

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEG 143
           +G  A  +S+  +     +  +L++      +   +F+E VH+ ++ Y+++SL    ++ 
Sbjct: 79  IGLLAFLDSVQTD-YSGKVADYLTDSSLSALMSVLSFQEVVHNQSYSYVLSSLVPKSEQD 137

Query: 144 ELFNMYREVPSITAKANW-ALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           E+F  ++    +  + ++ A  Y + +  P+   + +     ++   L F 
Sbjct: 138 EIFEYWKTDEVLRERNDFLAAGYQRFVDDPTPQTFMESVVYDVILEGLFFY 188


>gi|56707665|ref|YP_169561.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110670136|ref|YP_666693.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. tularensis
           FSC198]
 gi|187931834|ref|YP_001891819.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|224456732|ref|ZP_03665205.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254370173|ref|ZP_04986179.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874478|ref|ZP_05247188.1| nrdB, biofunctional protein, glutaredoxin 3
           protein/ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|56604157|emb|CAG45165.1| Biofunctional protein, glutaredoxin 3
           protein/Ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. tularensis SCHU
           S4]
 gi|110320469|emb|CAL08548.1| Biofunctional protein, glutaredoxin 3
           protein/Ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151568417|gb|EDN34071.1| hypothetical protein FTBG_01287 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|187712743|gb|ACD31040.1| bifunctional protein: glutaredoxin 3/ribonucleotide reductase beta
           subunit [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|254840477|gb|EET18913.1| nrdB, biofunctional protein, glutaredoxin 3
           protein/ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282158827|gb|ADA78218.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 410

 Score =  131 bits (331), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 2/129 (1%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA +  +     HW+  E+ + +D+  WK+   +T  E+  I   L  F  S+  
Sbjct: 102 PFNYPWAVDLTVKHEKAHWIEDEIDLSEDVTDWKN-GKITKVEKEYITNILRLFTQSDVA 160

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V  N          N E R  L   A  E +H   +  +  +LGL + E ++ + E  ++
Sbjct: 161 VGQNYYDQFIPLFKNNEIRNMLGSFAAREGIHQRAYALLNDTLGLPDSE-YHAFLEYKAM 219

Query: 156 TAKANWALQ 164
           T K ++ + 
Sbjct: 220 TDKIDFMMD 228


>gi|118497575|ref|YP_898625.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. novicida
           U112]
 gi|195536272|ref|ZP_03079279.1| ribonucleoside-diphosphate reductase, beta subunit domain
           [Francisella tularensis subsp. novicida FTE]
 gi|208779374|ref|ZP_03246720.1| ribonucleoside-diphosphate reductase, beta subunit domain
           [Francisella novicida FTG]
 gi|254372936|ref|ZP_04988425.1| hypothetical protein FTCG_00507 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|118423481|gb|ABK89871.1| bifunctional protein: glutaredoxin 3 /ribonucleotide reductase beta
           subunit [Francisella novicida U112]
 gi|151570663|gb|EDN36317.1| hypothetical protein FTCG_00507 [Francisella novicida GA99-3549]
 gi|194372749|gb|EDX27460.1| ribonucleoside-diphosphate reductase, beta subunit domain
           [Francisella tularensis subsp. novicida FTE]
 gi|208745174|gb|EDZ91472.1| ribonucleoside-diphosphate reductase, beta subunit domain
           [Francisella novicida FTG]
          Length = 410

 Score =  131 bits (331), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 2/129 (1%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA +  +     HW+  E+ + +D+  WK+   +T  E+  I   L  F  S+  
Sbjct: 102 PFNYPWAVDLTVKHEKAHWIEDEIDLSEDVTDWKN-GKITKVEKEYITNILRLFTQSDVA 160

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V  N          N E R  L   A  E +H   +  +  +LGL + E ++ + E  ++
Sbjct: 161 VGQNYYDQFIPLFKNNEIRNMLGSFAAREGIHQRAYALLNDTLGLPDSE-YHAFLEYKAM 219

Query: 156 TAKANWALQ 164
           T K ++ + 
Sbjct: 220 TDKIDFMMD 228


>gi|196233679|ref|ZP_03132520.1| Ribonucleoside-diphosphate reductase [Chthoniobacter flavus
           Ellin428]
 gi|196222349|gb|EDY16878.1| Ribonucleoside-diphosphate reductase [Chthoniobacter flavus
           Ellin428]
          Length = 390

 Score =  131 bits (331), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 46/162 (28%), Positives = 84/162 (51%), Gaps = 2/162 (1%)

Query: 10  IQAGEKRVNVDDKRMLNA-RSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
           +   + R  +  KR++N  RS    +LPLKY  A+  Y     NHW P  + M  D   W
Sbjct: 43  LDKAKARARLAGKRVINGLRSAELNVLPLKYHEAYRIYKQMKANHWEPDVIDMTRDSQQW 102

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
            +   L+  ER +I+  +G+F+++E +V ++++  I  +L+  E +   LR   EE++H 
Sbjct: 103 -NTGALSPKERWIIEMGVGYFSAAEGIVGDSVLHVIEDNLTAAELKHASLRHIAEESIHM 161

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLS 170
            +  +II SL +D  E+   + ++PS+  K  +  ++   L 
Sbjct: 162 DSLLHIIGSLNIDLDEVTAKFSDIPSVQRKNAFITRHMPELK 203


>gi|254374389|ref|ZP_04989871.1| glutaredoxin [Francisella novicida GA99-3548]
 gi|151572109|gb|EDN37763.1| glutaredoxin [Francisella novicida GA99-3548]
          Length = 410

 Score =  131 bits (331), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 2/129 (1%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA +  +     HW+  E+ + +D+  WK+   +T  E+  I   L  F  S+  
Sbjct: 102 PFNYPWAVDLTVKHEKAHWIEDEIDLSEDVTDWKN-GKITKVEKEYITNILRLFTQSDVA 160

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V  N          N E R  L   A  E +H   +  +  +LGL + E ++ + E  ++
Sbjct: 161 VGQNYYDQFIPLFKNNEIRNMLGSFAAREGIHQRAYALLNDTLGLPDSE-YHAFLEYKAM 219

Query: 156 TAKANWALQ 164
           T K ++ + 
Sbjct: 220 TDKIDFMMD 228


>gi|254369307|ref|ZP_04985319.1| hypothetical protein FTAG_00272 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157122257|gb|EDO66397.1| hypothetical protein FTAG_00272 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 410

 Score =  131 bits (331), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 2/129 (1%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA +  +     HW+  E+ + +D+  WK+   +T  E+  I   L  F  S+  
Sbjct: 102 PFNYPWAVDLTVKHEKAHWIEDEIDLSEDVTDWKN-GKITKVEKEYITNILRLFTQSDVA 160

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V  N          N E R  L   A  E +H   +  +  +LGL + E ++ + E  ++
Sbjct: 161 VGQNYYDQFIPLFKNNEIRNMLGSFAAREGIHQRAYALLNDTLGLPDSE-YHAFLEYKAM 219

Query: 156 TAKANWALQ 164
           T K ++ + 
Sbjct: 220 TDKIDFMMD 228


>gi|50288235|ref|XP_446546.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49525854|emb|CAG59473.1| unnamed protein product [Candida glabrata]
          Length = 335

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 63/158 (39%), Gaps = 5/158 (3%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           +    D+ +L        + P+KY   W  Y       W   ++ +  D+  W++   L+
Sbjct: 2   KEGEKDEVLLMENKRRFVMFPIKYHEIWAAYKKVEAAFWTAEDMELAKDVKDWET---LS 58

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
             ++      L   + ++++V  NIV      L NPE + +   Q   E ++   +  ++
Sbjct: 59  AGQKEFFGNYLAICSRTDNIVNKNIVEKFSAELQNPEGKSFYGFQIMMENIYDEIYSMLV 118

Query: 136 TSLGL--DEGELFNMYREVPSITAKANWALQYTQTLSS 171
            +L    D   LF    +   + AK+ WA ++     S
Sbjct: 119 DALFTSVDNIPLFKAVCQQEEVKAKSEWAHRWVFDDES 156


>gi|89256330|ref|YP_513692.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. holarctica
           LVS]
 gi|115314778|ref|YP_763501.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156502403|ref|YP_001428469.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167010840|ref|ZP_02275771.1| ribonucleotide-diphosphate reductase beta subunit [Francisella
           tularensis subsp. holarctica FSC200]
 gi|254367665|ref|ZP_04983686.1| biofunctional protein: glutaredoxin 3
           protein-ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. holarctica 257]
 gi|290952877|ref|ZP_06557498.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295313922|ref|ZP_06804487.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella tularensis subsp. holarctica
           URFT1]
 gi|89144161|emb|CAJ79423.1| Biofunctional protein, glutaredoxin 3
           protein/Ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. holarctica LVS]
 gi|115129677|gb|ABI82864.1| ribonucleoside-diphosphate reductase [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134253476|gb|EBA52570.1| biofunctional protein: glutaredoxin 3
           protein-ribonucleoside-diphosphate reductase, beta
           subunit [Francisella tularensis subsp. holarctica 257]
 gi|156253006|gb|ABU61512.1| bifunctional glutaredoxin /ribonucleoside-diphosphate reductase
           beta subunit [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 410

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 2/129 (1%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA +  +     HW+  E+ + +D+  WK+   +T  E+  I   L  F  S+  
Sbjct: 102 PFNYPWAVDLTVKHEKAHWIEDEIDLSEDVTDWKN-GKITKVEKEYITNILRLFTQSDVA 160

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V  N          N E R  L   A  E +H   +  +  +LGL + E ++ + E  ++
Sbjct: 161 VGQNYYDQFIPLFKNNEIRNMLGSFAAREGIHQRAYALLNDTLGLPDSE-YHAFLEYKAM 219

Query: 156 TAKANWALQ 164
           T K ++ + 
Sbjct: 220 TDKIDFMMD 228


>gi|57339646|gb|AAW49810.1| hypothetical protein FTT0532 [synthetic construct]
          Length = 445

 Score =  131 bits (329), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 2/129 (1%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA +  +     HW+  E+ + +D+  WK+   +T  E+  I   L  F  S+  
Sbjct: 128 PFNYPWAVDLTVKHEKAHWIEDEIDLSEDVTDWKN-GKITKVEKEYITNILRLFTQSDVA 186

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V  N          N E R  L   A  E +H   +  +  +LGL + E ++ + E  ++
Sbjct: 187 VGQNYYDQFIPLFKNNEIRNMLGSFAAREGIHQRAYALLNDTLGLPDSE-YHAFLEYKAM 245

Query: 156 TAKANWALQ 164
           T K ++ + 
Sbjct: 246 TDKIDFMMD 254


>gi|167627842|ref|YP_001678342.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167597843|gb|ABZ87841.1| Ribonucleoside-diphosphate reductase [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
          Length = 410

 Score =  131 bits (329), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 2/129 (1%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA +  +     HW+  E+ + +D+  WK+   +T  E+  I   L  F  S+  
Sbjct: 102 PFSYPWAVDLTVKHEKAHWIEDEIDLSEDVTDWKN-GKITKVEKEYITNILRLFTQSDVA 160

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V  N          N E R  L   A  E +H   +  +  +LGL + E ++ + E  ++
Sbjct: 161 VGQNYYDQFIPLFKNNEVRNMLGSFAAREGIHQRAYALLNDTLGLPDSE-YHAFLEYKAM 219

Query: 156 TAKANWALQ 164
           T K ++ + 
Sbjct: 220 TDKIDFMMD 228


>gi|241668401|ref|ZP_04755979.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876934|ref|ZP_05249644.1| glutaredoxin 3/ribonucleotide reductase beta subunit [Francisella
           philomiragia subsp. philomiragia ATCC 25015]
 gi|254842955|gb|EET21369.1| glutaredoxin 3/ribonucleotide reductase beta subunit [Francisella
           philomiragia subsp. philomiragia ATCC 25015]
          Length = 410

 Score =  131 bits (329), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 2/129 (1%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA +  +     HW+  E+ + +D+  WK+   +T  E+  I   L  F  S+  
Sbjct: 102 PFSYPWAVDLTVKHEKAHWIEDEIDLSEDVTDWKN-GKITKVEKEYITNILRLFTQSDVA 160

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V  N          N E R  L   A  E +H   +  +  +LGL + E ++ + E  ++
Sbjct: 161 VGQNYYDQFIPLFKNNEVRNMLGSFAAREGIHQRAYALLNDTLGLPDSE-YHAFLEYKAM 219

Query: 156 TAKANWALQ 164
           T K ++ + 
Sbjct: 220 TDKIDFMMD 228


>gi|301629349|ref|XP_002943805.1| PREDICTED: ribonucleoside-diphosphate reductase subunit beta-like,
           partial [Xenopus (Silurana) tropicalis]
          Length = 120

 Score =  131 bits (329), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 55/92 (59%), Positives = 72/92 (78%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           S   + ++RVN  DKR++N ++DVNQL+P KY WAWEKYL+ C NHWMP EV M  D+AL
Sbjct: 29  SAAASQQRRVNAADKRIINGQTDVNQLVPFKYKWAWEKYLATCANHWMPQEVNMTRDIAL 88

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
           WK  NGLT+DER +++RNLGFF +++SL ANN
Sbjct: 89  WKDPNGLTEDERRIVRRNLGFFTTADSLAANN 120


>gi|288554979|ref|YP_003426914.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus
           pseudofirmus OF4]
 gi|288546139|gb|ADC50022.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus
           pseudofirmus OF4]
          Length = 344

 Score =  130 bits (328), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 80/171 (46%), Gaps = 7/171 (4%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
              S+V     +++ WA+  Y +   N W P E+ M  D   +++   LT+ E+   K+ 
Sbjct: 23  GESSNVLNWDDVRFSWAYPLYKNMLANFWTPFEINMSHDTKQFQN---LTETEQEAFKKI 79

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD--EG 143
           +G  A  +S+  +   L +  +L++      +   +F+E VH+ ++ Y+++SL     + 
Sbjct: 80  IGLLAFLDSVQTD-YSLKVADYLTDSSLVALMSVLSFQEVVHNQSYSYVLSSLVPKATQD 138

Query: 144 ELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           E+F+ ++  P +  +  + +  Y +  ++P+     +     ++   + F 
Sbjct: 139 EIFDYWKNDPVLKERNEFIVDGYEEFANNPTPDTLARSIVYDVILEGVNFY 189


>gi|14970916|emb|CAC44510.1| putative ribonucleotide reductase small subunit [Sphaerechinus
           granularis]
          Length = 141

 Score =  130 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 7/112 (6%)

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD-- 141
             L FFA+S+ +V  N+V    + +   E R +   Q   E +HS  +  +I +   D  
Sbjct: 1   HVLAFFAASDGIVNENLVERFSQEVQIAEARCFYGFQIAIENIHSEMYSLLIDAYIKDAV 60

Query: 142 -EGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
               LFN    +P +T KA WAL +  + S+     +  R  +      + F
Sbjct: 61  QRDYLFNAVETMPCVTKKAQWALDWISSDSAD----FGTRIVAFAAVEGIFF 108


>gi|149182583|ref|ZP_01861054.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           SG-1]
 gi|148849719|gb|EDL63898.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           SG-1]
          Length = 345

 Score =  128 bits (323), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 78/179 (43%), Gaps = 7/179 (3%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           N     +    S++     +++ WA+ KY     N W P E+ M  D+   K    LT+ 
Sbjct: 16  NASTAIINGKSSNILNWDDVRFSWAYPKYKRMLGNFWTPFEINMSKDI---KQFPNLTEQ 72

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+    + +G  A  +S+  +     +  +L++      ++  A +E VH+H++ Y+++S
Sbjct: 73  EQDTFLKVIGLLALLDSIQTD-YAGKVADYLTDSSLNALMIILAQQEVVHNHSYSYVLSS 131

Query: 138 LGL--DEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           +     + E+F+ +R  P++  + ++    Y     +P+           ++   L F 
Sbjct: 132 IVSKNKQDEVFDYWRTEPTLRKRNDFITNGYQGFAENPNIENLLHSIVYDVILEGLFFY 190


>gi|319655055|ref|ZP_08009124.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           2_A_57_CT2]
 gi|317393250|gb|EFV74019.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           2_A_57_CT2]
          Length = 345

 Score =  128 bits (322), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 75/179 (41%), Gaps = 7/179 (3%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           N     +    S++     +++ WA+ KY     N W P E+ M  D+   K    L   
Sbjct: 16  NKSTSIINGECSNILNWDDVRFSWAYPKYKKMLANFWTPFEINMSQDI---KQFPELRKS 72

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+    + +G  A  +S+  +     +  ++++      ++  A +E +H+H++ Y+++S
Sbjct: 73  EQEAFLKIIGLLALLDSIQTD-YAGKVADYITDSSISALMIILAQQEVIHNHSYSYVLSS 131

Query: 138 LGL--DEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           L     + E+F  +R  P +  +  + +  Y     +PS     K     ++   L F 
Sbjct: 132 LVPKQKQDEVFEFWRTEPILAERNEFVVNGYKDFAENPSAENLLKSIVFDVVLEGLFFY 190


>gi|89097912|ref|ZP_01170799.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           NRRL B-14911]
 gi|89087414|gb|EAR66528.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus sp.
           NRRL B-14911]
          Length = 353

 Score =  128 bits (321), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 80/174 (45%), Gaps = 8/174 (4%)

Query: 24  MLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMI 82
           ++N   S++     +++ WA+ KY     N W P E+ M  D+  +     L+++E+   
Sbjct: 28  IINGECSNILNWDDVRFQWAFPKYKRMLANFWTPFEINMSQDIKQFPD---LSEEEKEAF 84

Query: 83  KRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--L 140
            + +G  A  +S+  +     +  +L++      ++  A +E +H+H++ Y+++S+    
Sbjct: 85  LKIIGLLALLDSIQTD-YAGKVADYLTDSSLSALMIILAQQEVIHNHSYSYVLSSIVDKN 143

Query: 141 DEGELFNMYREVPSITAKANW-ALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            + E+F  +R  P++  +  + A  Y     SP+     K     ++   L F 
Sbjct: 144 KQDEVFEFWRTEPALIKRNEFVASGYRNFAESPTVDSLLKSIIFDVVLEGLFFY 197


>gi|221104331|ref|XP_002154681.1| PREDICTED: similar to ribonucleotide reductase small subunit,
           partial [Hydra magnipapillata]
          Length = 261

 Score =  126 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 69/165 (41%), Gaps = 9/165 (5%)

Query: 9   PIQAGEKRVNVDDKRMLNARSDVNQLLPL--KYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
              A +++    ++ +LN       + P+  K+   W+ Y    + +W   E+   +D  
Sbjct: 26  EYDANDEKKKDSEEEILNKDLSRLVVKPINSKHKVIWDLYKKQKDAYWTAEEIDFSNDRH 85

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +   +    + +  IKR L FFA ++S+V  NI   + + ++  E       Q   E  
Sbjct: 86  DFLKVDK---NIQHFIKRILAFFAGADSIVNINIKKKLSK-ITVKEAEIAYGFQQMMEDT 141

Query: 127 HSHTFQYIITSLGLDE---GELFNMYREVPSITAKANWALQYTQT 168
           HS  +  ++  +  D     EL N ++ V SI     WA ++  +
Sbjct: 142 HSEVYADMLIKIITDPVERDELINAFKTVASIKRMIQWAQRWINS 186


>gi|15613065|ref|NP_241368.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus
           halodurans C-125]
 gi|14195134|sp|Q9KFH7|RIR2_BACHD RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|10173115|dbj|BAB04221.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus
           halodurans C-125]
          Length = 345

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 78/179 (43%), Gaps = 7/179 (3%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           N     +    S+V     +++ WA+  Y +   N W P E+ M  D    K    LT+ 
Sbjct: 16  NASTGILNGKSSNVLNWDDVRFSWAYPLYKNMLANFWTPFEINMSHDA---KQFPTLTET 72

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+   K+ +G  A  +S+  +   +    +L++      +   +F+E VH+ ++ Y+++S
Sbjct: 73  EQEAFKKIIGLLAFLDSVQTD-YSMRAAEYLTDSSLAALMSVLSFQEVVHNQSYSYVLSS 131

Query: 138 LGLD--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           L     + E+F  ++    +  +  + +  Y + + +P+   + +     ++   L F 
Sbjct: 132 LVPKATQDEIFEYWKHDDVLKERNEFIIDGYEKFVDNPTPKTFLESIVYDVILEGLNFY 190


>gi|221105497|ref|XP_002169241.1| PREDICTED: similar to ribonucleoside-diphosphate reductase small
           chain [Hydra magnipapillata]
          Length = 363

 Score =  125 bits (315), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 69/165 (41%), Gaps = 9/165 (5%)

Query: 9   PIQAGEKRVNVDDKRMLNARSDVNQLLPL--KYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
              A +++    ++ +LN       + P+  K+   W+ Y    + +W   E+   +D  
Sbjct: 26  EYDANDEKKKDSEEEILNKDLSRLVVKPINSKHKVIWDLYKKQKDAYWTAEEIDFSNDRH 85

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +   +    + +  IKR L FFA ++S+V  NI   + + ++  E       Q   E  
Sbjct: 86  DFLKVDK---NIQHFIKRILAFFAGADSIVNINIKKKLSK-ITVKEAEIAYGFQQMMEDT 141

Query: 127 HSHTFQYIITSLGLDE---GELFNMYREVPSITAKANWALQYTQT 168
           HS  +  ++  +  D     EL N ++ V SI     WA ++  +
Sbjct: 142 HSEVYADMLIKIITDPVERDELINAFKTVASIKRMIQWAQRWINS 186


>gi|56418235|gb|AAV91049.1| ribonucleotide reductase beta subunit [Grouper iridovirus]
          Length = 384

 Score =  125 bits (315), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 2/130 (1%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
              P KY WA +  +     HW+ TEV ++DD+  WKS   LT  E+  I   L  F   
Sbjct: 73  CFKPFKYSWAEDVRVKHERIHWVETEVNLRDDVTDWKS-GALTQQEKEFISCVLRLFTQL 131

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
           +  V    +  + +     E R  L   A  EA+H   +  +  +LG+ + E ++ +   
Sbjct: 132 DVEVGGLYLDFLTQVFKCNEIRNMLTSFACREAIHQKAYSLLNDTLGMPDCE-YSAFVAY 190

Query: 153 PSITAKANWA 162
             +T K ++ 
Sbjct: 191 KEMTDKLDFM 200


>gi|294501621|ref|YP_003565321.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus
           megaterium QM B1551]
 gi|295706969|ref|YP_003600044.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus
           megaterium DSM 319]
 gi|294351558|gb|ADE71887.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           megaterium QM B1551]
 gi|294804628|gb|ADF41694.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           megaterium DSM 319]
          Length = 347

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 75/171 (43%), Gaps = 7/171 (4%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
              S++     +++ WA+ KY     N W P E+ M  D+   K    LT DE+    + 
Sbjct: 24  GKSSNILNWDDVRFSWAFPKYKRMLANFWTPFEINMGQDI---KQFPQLTADEQESFLKI 80

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEG 143
           +G  A  +S+ ++     +  ++++      ++  A +E VH+H++ Y+++SL     + 
Sbjct: 81  IGLLALLDSIQSD-YASKVADYVTDSSINALMIILAQQEVVHNHSYSYVLSSLVPKGKQD 139

Query: 144 ELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           E+F  +R    + A+ ++    Y       +   + K     ++   L F 
Sbjct: 140 EVFEYWRTDEKLRARNDFITNGYKAFSEEATVENFLKSMVYDVILEGLFFY 190


>gi|56692684|ref|YP_164142.1| ribonucleoside-diphosphate reductase beta subunit [Singapore
           grouper iridovirus]
 gi|42517396|gb|AAS18062.1| ribonucleoside-diphosphate reductase beta subunit [Singapore
           grouper iridovirus]
          Length = 384

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 2/130 (1%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
              P KY WA +  +     HW+ TEV ++DD+  WKS   L+  E+  I   L  F   
Sbjct: 73  CFKPFKYSWAEDIRVKHERIHWVETEVNLRDDVTDWKS-GALSQQEKEFISCVLRLFTQL 131

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
           +  V    +  + +     E R  L   A  EA+H   +  +  +LG+ + E ++ +   
Sbjct: 132 DVEVGGLYLDFLTQVFKCNEIRNMLTSFACREAIHQKAYSLLNDTLGMPDCE-YSAFVAY 190

Query: 153 PSITAKANWA 162
             +T K ++ 
Sbjct: 191 KEMTDKLDFM 200


>gi|298256097|gb|ADI71327.1| ribonucleoside diphosphate reductase beta subunit-like protein
           [European catfish virus]
 gi|298256101|gb|ADI71329.1| ribonucleoside diphosphate reductase beta subunit-like protein
           [European sheatfish virus]
          Length = 202

 Score =  124 bits (313), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 2/130 (1%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
              P +Y WA +        HWM TE+ ++DD+  WKS   +T  E+  +   L  F   
Sbjct: 29  CFKPFRYAWAEDIRTKHEKVHWMETEINLRDDVTDWKS-GVMTPGEKAFVSCVLRLFTQL 87

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
           +  V    +  + +     E R  L   A  EA+H   +  +  +LG+ + E +  + + 
Sbjct: 88  DVEVGALYLDHLTQVFRCNEIRNMLTSFACREAIHQKAYSLLNDTLGMPDCE-YQAFADY 146

Query: 153 PSITAKANWA 162
             +T K ++ 
Sbjct: 147 EEMTDKLDFM 156


>gi|298256099|gb|ADI71328.1| ribonucleoside diphosphate reductase beta subunit-like protein
           [Epizootic haematopoietic necrosis virus]
          Length = 202

 Score =  124 bits (313), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 2/130 (1%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
              P +Y WA +        HW+ TE+ ++DD+  WKS   +T  E+  +   L  F   
Sbjct: 29  CFKPFRYAWAEDIRTKHEKVHWVETEINLRDDVTDWKS-GVMTPGEKAFVSCVLRLFTQL 87

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
           +  V    +  + +     E R  L   A  EA+H   +  +  +LG+ + E +  + + 
Sbjct: 88  DVEVGALYLDHLAQVFRCNEIRNMLTSFACREAIHQKAYSLLNDTLGMPDCE-YQAFADY 146

Query: 153 PSITAKANWA 162
             +T K ++ 
Sbjct: 147 EEMTDKLDFM 156


>gi|146189565|emb|CAM91784.1| hypothetical protein [Platynereis dumerilii]
          Length = 87

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 3/90 (3%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
              W+ Y  A  + W   EV +  D+A W+S   L  DER  I   L FFA+S+ +V  N
Sbjct: 1   PDIWQFYKRAEASFWTAEEVDLSKDVAQWES---LKKDERHFISHVLAFFAASDGIVNEN 57

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
           +V    + +   E R +   Q   E +HS 
Sbjct: 58  LVERFSKEVQVTEARFFYGFQIAIENIHSE 87


>gi|327198722|emb|CCA61423.1| unnamed protein product [Diadromus pulchellus ascovirus 4a]
          Length = 395

 Score =  124 bits (312), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 64/151 (42%), Gaps = 8/151 (5%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
            +   P +Y   + K+     +HW+P EVPM DD+  W   N L D+++  +     FF 
Sbjct: 7   RSYYKPFQYEQFYNKWKVHERSHWLPAEVPMHDDVHDWN--NRLDDNQKKFLTNIFRFFT 64

Query: 91  SSESLVANNIVLAIYRHL-SNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY 149
             +  VA         +    PE   ++   A  EAVH   + ++I +LG+ E   +  +
Sbjct: 65  QGDVDVAGAYCSEYLPNFCETPEIAMFMCSVAAREAVHIDAYSHLIETLGMPES-TYREF 123

Query: 150 REVPSITAKANWALQYTQ----TLSSPSFHY 176
            E   +  K ++  ++      +L   SF  
Sbjct: 124 LEYHEMKEKQDYIKKFQHGNYGSLKDDSFMT 154


>gi|225734460|gb|ACO25228.1| hypothetical protein [Epizootic haematopoietic necrosis virus]
          Length = 387

 Score =  124 bits (312), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 2/130 (1%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
              P +Y WA +        HW+ TE+ ++DD+  WKS   +T  E+  +   L  F   
Sbjct: 72  CFKPFRYAWAEDIRTKHEKVHWVETEINLRDDVTDWKS-GVMTPGEKAFVSCVLRLFTQL 130

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
           +  V    +  + +     E R  L   A  EA+H   +  +  +LG+ + E +  + + 
Sbjct: 131 DVEVGALYLDHLAQVFRCNEIRNMLTSFACREAIHQKAYSLLNDTLGMPDCE-YQAFADY 189

Query: 153 PSITAKANWA 162
             +T K ++ 
Sbjct: 190 EEMTDKLDFM 199


>gi|298256095|gb|ADI71326.1| ribonucleoside diphosphate reductase beta subunit-like protein [Cod
           iridovirus/15/04.11.92/DNK]
 gi|298256103|gb|ADI71330.1| ribonucleoside diphosphate reductase beta subunit-like protein
           [Pike-perch iridovirus]
          Length = 202

 Score =  124 bits (311), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 2/130 (1%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
              P +Y WA +        HW+ TE+ ++DD+  WKS   +T  E+  +   L  F   
Sbjct: 29  CFKPFRYAWAEDIRTKHEKVHWVETEINLRDDVTDWKS-GVMTPGEKAFVSCVLRLFTQL 87

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
           +  V    +  + +     E R  L   A  EA+H   +  +  +LG+ + E +  + + 
Sbjct: 88  DVEVGALYLDHLTQVFRCNEIRNMLTSFACREAIHQKAYSLLNDTLGMPDCE-YQAFADY 146

Query: 153 PSITAKANWA 162
             +T K ++ 
Sbjct: 147 EEMTDKLDFM 156


>gi|114560571|ref|XP_513941.2| PREDICTED: hypothetical protein [Pan troglodytes]
          Length = 403

 Score =  123 bits (310), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 5/90 (5%)

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
           +E   I R L FFA+S+ +V  N+V    + +   E R +   Q   E  HS  +  +I 
Sbjct: 106 EESDFISRVLAFFAASDGIVNENLVERFSQEVQITEARCFYDFQIAMENTHSEMYSLLID 165

Query: 137 SLGLDEGE---LFNMYREVPSITAKANWAL 163
           +   D  E   LFN     P +  KANWAL
Sbjct: 166 TYIKDSKEREFLFNTIET-PCV-KKANWAL 193


>gi|298256109|gb|ADI71333.1| ribonucleoside diphosphate reductase beta subunit-like protein
           [Short-finned eel ranavirus]
          Length = 202

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 2/130 (1%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
              P +Y WA +        HW+ TE+ ++DD+  WKS   +T  E+  +   L  F   
Sbjct: 29  CFKPFRYAWAEDIRTKHEKVHWVETEINLRDDVTDWKS-GVMTPGEKAFVSCVLRLFTQL 87

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
           +  V    +  + +     E R  L   A  EA+H   +  +  +LG+ + E +  + + 
Sbjct: 88  DVEVGALYLDHLTQVFRCNEIRNMLTSFACREAIHQKAYSLLNDTLGMPDCE-YQAFADY 146

Query: 153 PSITAKANWA 162
             +T K ++ 
Sbjct: 147 EEMTDKLDFM 156


>gi|298256105|gb|ADI71331.1| ribonucleoside diphosphate reductase beta subunit-like protein
           [Ranavirus maxima/9995205/DNK]
          Length = 202

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 2/130 (1%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
              P +Y WA +        HW+ TE+ ++DD+  WKS   +T  E+  +   L  F   
Sbjct: 29  CFKPFRYAWAEDIRTKHEKVHWVETEINLRDDVTDWKS-GVMTPGEKAFVSCVLRLFTQL 87

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
           +  V    +  + +     E R  L   A  EA+H   +  +  +LG+ + E +  + + 
Sbjct: 88  DVEVGALYLDHLTQVFRCNEIRNMLTSFACREAIHQKAYSLLNDTLGMPDCE-YQAFADY 146

Query: 153 PSITAKANWA 162
             +T K ++ 
Sbjct: 147 EEMTDKLDFM 156


>gi|298256093|gb|ADI71325.1| ribonucleoside diphosphate reductase beta subunit-like protein
           [Bohle iridovirus]
          Length = 202

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 2/130 (1%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
              P +Y WA +        HW+ TE+ ++DD+  WKS   +T  E+  +   L  F   
Sbjct: 29  CFKPFRYAWAEDIRTKHEKVHWVETEINLRDDVTDWKS-GVMTPGEKAFVSCVLRLFTQL 87

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
           +  V    +  + +     E R  L   A  EA+H   +  +  +LG+ + E +  + + 
Sbjct: 88  DVEVGALYLDHLTQVFRCNEIRNMLTSFACREAIHQKAYSLLNDTLGMPDCE-YQAFADY 146

Query: 153 PSITAKANWA 162
             +T K ++ 
Sbjct: 147 GEMTDKLDFM 156


>gi|228861279|ref|YP_002854302.1| ribonucleotide reductase small subunit [Soft-shelled turtle
           iridovirus]
 gi|45550045|gb|AAS67856.1| ribonucleotide reductase small subunit [Rana grylio virus 9506]
 gi|194307559|gb|ACF42289.1| ribonucleotide reductase small subunit [Soft-shelled turtle
           iridovirus]
          Length = 387

 Score =  123 bits (308), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 2/130 (1%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
              P +Y WA +        HW+ TE+ ++DD+  WKS   +T  E+  +   L  F   
Sbjct: 72  CFKPFRYTWAEDIRTKHEKVHWVETEINLRDDVTDWKS-GVMTPGEKAFVSCVLRLFTQL 130

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
           +  V    +  + +     E R  L   A  EA+H   +  +  +LG+ + E +  + + 
Sbjct: 131 DVEVGALYLDHLTQVFRCNEIRNMLTSFACREAIHQKAYSLLNDTLGMPDCE-YQAFADY 189

Query: 153 PSITAKANWA 162
             +T K ++ 
Sbjct: 190 GEMTDKLDFM 199


>gi|49237365|ref|YP_031646.1| ribonucleoside diphosphate reductase beta subunit-like protein
           [Frog virus 3]
 gi|47060183|gb|AAT09727.1| ribonucleoside diphosphate reductase beta subunit-like protein
           [Frog virus 3]
          Length = 387

 Score =  123 bits (308), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 2/130 (1%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
              P +Y WA +        HW+ TE+ ++DD+  WKS   +T  E+  +   L  F   
Sbjct: 72  CFKPFRYNWAEDIRTKHEKVHWVETEINLRDDVTDWKS-GVMTPGEKAFVSCVLRLFTQL 130

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
           +  V    +  + +     E R  L   A  EA+H   +  +  +LG+ + E +  + + 
Sbjct: 131 DVEVGALYLDHLTQVFRCNEIRNMLTSFACREAIHQKAYSLLNDTLGMPDCE-YQAFADY 189

Query: 153 PSITAKANWA 162
             +T K ++ 
Sbjct: 190 GEMTDKLDFM 199


>gi|261599112|ref|YP_003257364.1| ribonucleotide-diphosphate reductase beta subunit [Blattabacterium
           sp. (Periplaneta americana) str. BPLAN]
 gi|261497769|gb|ACX84218.1| ribonucleotide-diphosphate reductase beta subunit [Blattabacterium
           sp. (Periplaneta americana) str. BPLAN]
          Length = 357

 Score =  123 bits (308), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 40/130 (30%), Positives = 58/130 (44%), Gaps = 5/130 (3%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
            D     P +Y WA+E +    N HW+ TE+ MQ D+  W     LTD E+ +I   L  
Sbjct: 5   EDRLNFKPFEYQWAYEYWFKQQNAHWLHTEINMQSDIYDWNK--NLTDQEKNVIGDILKG 62

Query: 89  FASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNM 148
           FA +E+ V N     I +    PE +         E +H+  + Y+   LGLD    F+ 
Sbjct: 63  FAQTETEVGNYWSEMIPKWFPIPEIKMMGQAFGSFETIHAAAYSYLNDILGLDN---FHA 119

Query: 149 YREVPSITAK 158
           + E   I  K
Sbjct: 120 FLEDDVIMNK 129


>gi|298256107|gb|ADI71332.1| ribonucleoside diphosphate reductase beta subunit-like protein
           [Rana esculenta virus]
          Length = 202

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 55/130 (42%), Gaps = 2/130 (1%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
              P +Y WA          HW+ TE+ ++DD+  WKS   +T  E+  +   L  F   
Sbjct: 29  CFKPFRYAWAEAIRTKHEKVHWVETEINLRDDVTDWKS-GVMTPGEKAFVSCVLRLFTQL 87

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
           +  V    +  + +     E R  L   A  EA+H   +  +  +LG+ + E +  + + 
Sbjct: 88  DVEVGALYLDHLTQVFRCNEIRNMLTSFACREAIHQKAYSLLNDTLGMPDCE-YQAFADY 146

Query: 153 PSITAKANWA 162
             +T K ++ 
Sbjct: 147 EEMTDKLDFM 156


>gi|45686047|ref|YP_003810.1| unknown [Ambystoma tigrinum virus]
 gi|37722471|gb|AAP33216.1| unknown [Ambystoma tigrinum stebbensi virus]
          Length = 387

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 55/130 (42%), Gaps = 2/130 (1%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
              P +Y WA          HW+ TE+ ++DD+  WKS   +T  E+  +   L  F   
Sbjct: 72  CFKPFRYAWAENIRTKHEKVHWVETEINLRDDVTDWKS-GVMTPGEKAFVSCVLRLFTQL 130

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
           +  V    +  + +     E R  L   A  EA+H   +  +  +LG+ + E +  + + 
Sbjct: 131 DVEVGALYLDHLTQVFRCNEIRNMLTSFACREAIHQKAYSLLNDTLGMPDCE-YQAFADY 189

Query: 153 PSITAKANWA 162
             +T K ++ 
Sbjct: 190 EEMTDKLDFM 199


>gi|195953600|ref|YP_002121890.1| Ribonucleoside-diphosphate reductase [Hydrogenobaculum sp. Y04AAS1]
 gi|195933212|gb|ACG57912.1| Ribonucleoside-diphosphate reductase [Hydrogenobaculum sp. Y04AAS1]
          Length = 319

 Score =  122 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 4/168 (2%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
                V  K     +S   +L  + Y      Y  A NN+W+P E  + +D   +     
Sbjct: 5   TAVDEVIKKDGKVCQSYTYKLDSVVYPEILNLYTKAKNNYWIPEEYDLANDKHEF--YEK 62

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           L D ER  +   +GFF+S+E  V  NI+  I + + N E R +L  Q  EE  H  TF+Y
Sbjct: 63  LNDIERHYMLHTVGFFSSAEGWVGQNILE-ISKRIRNTETRMFLGYQLMEEMKHIDTFRY 121

Query: 134 IITSLGLDEGELFNMYREVPSITAKANWALQYTQTL-SSPSFHYWNKR 180
           I+  L L   E++ M+  V  I  KA++ ++    L   P+     + 
Sbjct: 122 IMDGLDLKPHEVYAMHENVKEIKRKADFEVKRAMALCEEPTEENLIED 169


>gi|18656506|gb|AAL77807.1|AF389451_14 ribonucleoside-diphosphate reductase beta subunit [Tiger frog
           virus]
          Length = 387

 Score =  122 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 2/130 (1%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
              P +Y WA +        HW+ TE+ ++DD+  WKS   +T  E+  +   L  F   
Sbjct: 72  CFKPFRYTWAEDIRTKHEKVHWVETEINLRDDVTDWKS-GVMTPGEKAFVSCVLRLFTQL 130

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
           +  V    +  + +     E R  L   A  EA+H   +  +  +LG+ + E +  + + 
Sbjct: 131 DVEVGALYLDHLTQVFRCNEIRNMLTSFACREAIHQKAYSLLNDTLGMPDCE-YQAFADY 189

Query: 153 PSITAKANWA 162
             +T K ++ 
Sbjct: 190 VEMTDKLDFM 199


>gi|109287926|ref|YP_654620.1| hypothetical protein MIV048L [Invertebrate iridescent virus 3]
 gi|123878658|sp|Q197B2|RIR2_IIV3 RecName: Full=Probable ribonucleoside-diphosphate reductase small
           subunit 048L; AltName: Full=Ribonucleotide reductase
           small subunit
 gi|106073549|gb|ABF82078.1| hypothetical protein MIV048L [Aedes taeniorhynchus iridescent
           virus]
          Length = 376

 Score =  120 bits (302), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 4/135 (2%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
           +D     P +Y   ++K+ +  + HW   E+ MQDD+  W   N L++ E+  + + L F
Sbjct: 48  ADRTTFKPFEYPGCYDKWDTHEHAHWSFKELNMQDDVHDWH--NRLSEAEKTFLVQILRF 105

Query: 89  FASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNM 148
           F   +  VA   V    +    PE R  L      EA+H  ++ ++I++L L +   +  
Sbjct: 106 FTQGDVDVAVGYVQ-YLQLFQQPEVRMMLFSFGAREAMHIASYSHLISTLNLPDV-TYQE 163

Query: 149 YREVPSITAKANWAL 163
           + +  ++  K  +  
Sbjct: 164 FLKYKAMKDKHEFVF 178


>gi|289677030|ref|ZP_06497920.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. syringae FF5]
          Length = 243

 Score =  119 bits (298), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 43/85 (50%), Positives = 58/85 (68%)

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           NPE RQY+LRQAFEEA+H+H +QY I SL +DEGE+FNMY E+PS+  KA W L+YT+++
Sbjct: 1   NPEGRQYILRQAFEEAIHTHAYQYCIESLAMDEGEIFNMYHEIPSVAKKAAWGLKYTRSI 60

Query: 170 SSPSFHYWNKRRRSRILTRSLRFLC 194
           S P F          +L   + + C
Sbjct: 61  SDPKFETGTVDTDKELLRNLIAYYC 85


>gi|289677031|ref|ZP_06497921.1| ribonucleotide-diphosphate reductase subunit beta [Pseudomonas
           syringae pv. syringae FF5]
          Length = 151

 Score =  118 bits (297), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 49/85 (57%), Positives = 62/85 (72%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQD 63
             GL+ ++    RV VD+K M+N R+D+NQL+P KY WAW+KYL  C NHWMP EV M  
Sbjct: 67  AEGLAELEGASARVAVDEKMMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTA 126

Query: 64  DLALWKSKNGLTDDERLMIKRNLGF 88
           D+ALWK+  GLTDDER ++ RNLGF
Sbjct: 127 DIALWKNPEGLTDDERRIVMRNLGF 151


>gi|225849393|ref|YP_002729557.1| ribonucleoside-diphosphate reductase subunit beta
           [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644764|gb|ACN99814.1| ribonucleoside-diphosphate reductase, beta subunit
           [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 326

 Score =  118 bits (297), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 7/157 (4%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    E Y       W P E+ +Q D+  +KS   LT  E+ +    +G+FASSE LV 
Sbjct: 20  KYPVFRELYTKQKKAVWFPEELNIQQDVLDYKS---LTPTEKDLFDSAVGYFASSELLVQ 76

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
           N +    +  L++P  +     Q F E +HS  F+ I+ S  +D  +++N+  E   +  
Sbjct: 77  NVLGNGFFPVLTDPYAKMSFSTQMFMENIHSDFFEIILNSFDMDRKKIYNITLEDKLLKE 136

Query: 158 KANWALQYTQTLS----SPSFHYWNKRRRSRILTRSL 190
           K    ++    ++     P      K+  + IL  ++
Sbjct: 137 KQELIVRAVDRITYGKADPDTLEGKKQILTSILLNNI 173


>gi|156843271|ref|XP_001644704.1| hypothetical protein Kpol_1056p47 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115352|gb|EDO16846.1| hypothetical protein Kpol_1056p47 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 361

 Score =  118 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 67/161 (41%), Gaps = 6/161 (3%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           E   +   + +L        L+P+K+   ++ Y       W   E+    D+  W  K  
Sbjct: 32  EVEESQSKEPILMENKSRFVLMPIKFHTVYDGYKKREALFWPAEEIDFSHDIINWGKKA- 90

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
            +D ++ +IK++L F  SS  L +  +   I   +  PE + +   +   E +H   +  
Sbjct: 91  -SDHDKSIIKKSLAFLCSS-VLGSFYLPEHISSEVQIPEAKCFYGFEIMVENIHGEVYSL 148

Query: 134 IITSLGLDEGELFNMYREVP---SITAKANWALQYTQTLSS 171
            I  L  +  E+  M+++V     I  K ++A ++    SS
Sbjct: 149 AIDQLVHNTDEIKKMFKDVDNAKFIERKKSFAERWFDKESS 189


>gi|158430770|pdb|2RCC|A Chain A, Crystal Structure Of Putative Class I Ribonucleotide
           Reductase (Np_241368.1) From Bacillus Halodurans At 1.90
           A Resolution
 gi|158430771|pdb|2RCC|B Chain B, Crystal Structure Of Putative Class I Ribonucleotide
           Reductase (Np_241368.1) From Bacillus Halodurans At 1.90
           A Resolution
 gi|158430772|pdb|2RCC|C Chain C, Crystal Structure Of Putative Class I Ribonucleotide
           Reductase (Np_241368.1) From Bacillus Halodurans At 1.90
           A Resolution
          Length = 346

 Score =  118 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 75/179 (41%), Gaps = 7/179 (3%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           N     +    S+V     +++ WA+  Y +   N W P E+    D    K    LT+ 
Sbjct: 17  NASTGILNGKSSNVLNWDDVRFSWAYPLYKNXLANFWTPFEINXSHDA---KQFPTLTET 73

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+   K+ +G  A  +S+  +        +L++          +F+E VH+ ++ Y+++S
Sbjct: 74  EQEAFKKIIGLLAFLDSVQTD-YSXRAAEYLTDSSLAALXSVLSFQEVVHNQSYSYVLSS 132

Query: 138 LGLD--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           L     + E+F  ++    +  +  + +  Y + + +P+   + +     ++   L F 
Sbjct: 133 LVPKATQDEIFEYWKHDDVLKERNEFIIDGYEKFVDNPTPKTFLESIVYDVILEGLNFY 191


>gi|212638239|ref|YP_002314759.1| ribonucleotide-diphosphate reductase subunit beta [Anoxybacillus
           flavithermus WK1]
 gi|212559719|gb|ACJ32774.1| Ribonucleotide reductase, beta subunit [Anoxybacillus flavithermus
           WK1]
          Length = 345

 Score =  117 bits (294), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 73/184 (39%), Gaps = 7/184 (3%)

Query: 13  GEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
                N     +    S +     +KY   ++ Y     N W P E+ M DD+  W    
Sbjct: 10  EPSHPNKATSIINGKASGILNWNDIKYSHFYDIYKMLLGNFWTPFEINMSDDIKQWH--- 66

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
            L++ ER      +G  +  +S V  N + A+  ++++P  +        +E VH+ ++ 
Sbjct: 67  ALSERERDAFLHIIGLLSILDS-VQPNFIGAMKEYITDPSVKAIFSIIEQQEVVHNQSYS 125

Query: 133 YIITSLGL--DEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRS 189
           Y++ S+    ++   F M R  P I  +    ++ Y      P+   + +   + ++   
Sbjct: 126 YVLASIEKLSEQHRAFEMARTNPHIYKRNEHVIRVYEAFREQPTVETFCRALVASLVLEG 185

Query: 190 LRFL 193
           + F 
Sbjct: 186 INFY 189


>gi|269865992|ref|XP_002652118.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063125|gb|EED41939.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 134

 Score =  117 bits (294), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 3/104 (2%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L+       + P++Y   WE Y    +  W   EV M  D   +   + LT +E+  
Sbjct: 26  EPLLDEAKKRYVIFPIQYPEIWEFYKMHESTFWTVEEVDMTFDCEHF---STLTPNEQFF 82

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           IK  L FFA+S+ +V  N+V      +   E + +   Q   + 
Sbjct: 83  IKYVLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAMKT 126


>gi|269864086|ref|XP_002651449.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220064500|gb|EED42605.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 130

 Score =  117 bits (293), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 3/104 (2%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L+       + P++Y   WE Y    +  W   EV M  D   +   + LT +E+  
Sbjct: 26  EPLLDEAKKRYVIFPIQYPEIWEFYKMHESTFWTVEEVDMTFDCEHF---STLTPNEQFF 82

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
           IK  L FFA+S+ +V  N+V      +   E + +   Q   + 
Sbjct: 83  IKYVLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAMKT 126


>gi|294887656|ref|XP_002772196.1| ribonucleoside-diphosphate reductase small chain, putative
           [Perkinsus marinus ATCC 50983]
 gi|239876179|gb|EER04012.1| ribonucleoside-diphosphate reductase small chain, putative
           [Perkinsus marinus ATCC 50983]
          Length = 82

 Score =  117 bits (293), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 3/85 (3%)

Query: 46  YLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIY 105
           Y     + W   E+ +  DL  W++   LT +E+  IK  L FFA+S+ +V  N+     
Sbjct: 1   YKQHEASFWTAEEIDLGQDLRDWET---LTKNEQHFIKNVLAFFAASDGIVMENLASKFS 57

Query: 106 RHLSNPECRQYLLRQAFEEAVHSHT 130
             +  PE R +   Q   E +HS T
Sbjct: 58  CEVQIPEARAFYGFQTGMETIHSET 82


>gi|51869996|ref|YP_073549.1| Ribonucleotide reductase [Lymphocystis disease virus - isolate
           China]
 gi|51858204|gb|AAU10888.1| Ribonucleotide reductase [Lymphocystis disease virus - isolate
           China]
          Length = 374

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 2/127 (1%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           P  Y WA E      N HW   E+ + DD+  WK    L D E+  I + L  F   +  
Sbjct: 73  PFHYPWAVELRSLHENMHWTEKEISLADDVTDWK-IGKLLDVEKKFITQILRLFTQLDVS 131

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
           V             N E R  L   A  E  H   +  +  +LGL E + ++ + +   +
Sbjct: 132 VGQLYHNTFIPIFKNNEIRNMLCSFACREGTHQQAYALLNDTLGLPESD-YSAFLKYKQM 190

Query: 156 TAKANWA 162
           T K ++ 
Sbjct: 191 TDKTDFM 197


>gi|328768069|gb|EGF78116.1| hypothetical protein BATDEDRAFT_37293 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 356

 Score =  115 bits (289), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 65/185 (35%), Gaps = 11/185 (5%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           +  D+ +L        L P+++   W+ Y +   N W   EV M DDL  ++    L+  
Sbjct: 13  DTTDEPLLKPNPRRFVLFPIQFNEIWQAYKNLEANFWSAEEVEMSDDLNGFEQ---LSRK 69

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+ ++ +          L    I+      +  PE R +   Q  ++ +HS     I+  
Sbjct: 70  EQSLMLQITSILCMGCGLNNEAILSRYSDEIQIPEARCFFGFQLMQKNIHSELSMVILDM 129

Query: 138 LG---LDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRR-----SRILTRS 189
                    +L ++ +++PS T    WA  +      P                  L   
Sbjct: 130 FSESEKQRDDLLDVIQQLPSRTMWTEWARTHMTRSEEPFALRVTSLAIFQAIHQVSLRDI 189

Query: 190 LRFLC 194
           + F+ 
Sbjct: 190 IAFIA 194


>gi|307107666|gb|EFN55908.1| hypothetical protein CHLNCDRAFT_57791 [Chlorella variabilis]
          Length = 849

 Score =  114 bits (287), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 38/173 (21%), Positives = 64/173 (36%), Gaps = 27/173 (15%)

Query: 20  DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNN---------------------HWMPTE 58
             K +L+   D   + PLK    W +Y  A  +                      W   +
Sbjct: 555 HPKPLLDENPDRYCMFPLKEDRVWSQYKKAEASRPSGQAPNDPLCMAHTTFWTTFWTAED 614

Query: 59  VPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLL 118
           V    D   W+ +  L   ER  +   L + A+S+ L+ +N+V      +   E R +  
Sbjct: 615 VDFSSDARDWQDR--LAPGERSFLSSVLAYLAASDRLIQHNVVARFMIDVELAEARAFYA 672

Query: 119 RQAFEEAVHSHTFQYIITSLGLDEGELFNMY-REV---PSITAKANWALQYTQ 167
            Q F++ VH+     I+ +L   + E      R V   P+  AKA W  ++  
Sbjct: 673 FQLFKKNVHTEMVSAILAALFAGKEEQLAAVLRTVLALPAFQAKAAWVRKWIN 725


>gi|238584957|ref|XP_002390722.1| hypothetical protein MPER_09958 [Moniliophthora perniciosa FA553]
 gi|215454468|gb|EEB91652.1| hypothetical protein MPER_09958 [Moniliophthora perniciosa FA553]
          Length = 155

 Score =  114 bits (286), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 3/97 (3%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
             G+  +   ++ +L        L P++Y   W+ Y  A  + W   E+ +  DL  W  
Sbjct: 62  FVGDVELPESEEPLLKESKRRFVLFPIQYPEIWQMYKKAEASFWTAEEMDLSKDLHDWN- 120

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRH 107
            N + D+ER  I   L FFA+S+ +   N+V      
Sbjct: 121 -NRMNDNERHFISHVLAFFAASDGI-HENLVERFSNE 155


>gi|261885428|ref|ZP_06009467.1| ribonucleotide-diphosphate reductase subunit beta [Campylobacter
           fetus subsp. venerealis str. Azul-94]
          Length = 282

 Score =  114 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 71/194 (36%), Gaps = 13/194 (6%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARSDVNQLLP-LKYGWAWEKYLSACNNHW-----MPTEVP 60
              I        ++D+++           P  KY WA +       + W      P EV 
Sbjct: 3   RKKIYNPSSNETLNDRKVFGGNPHGILTSPKAKYTWALKL----LGSLWKQIPGFPKEVD 58

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
             DD+  +     LT  ++ M         S +S   NN+   I  +++ PE    L RQ
Sbjct: 59  TTDDVRDYA--CNLTTAKKRMYDLVWSQLISMDSFQTNNLADNINPYITAPEINAILARQ 116

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNK 179
           A+EEA HS ++  ++ ++  +   ++ M +    +  K ++    Y +     +      
Sbjct: 117 AYEEANHSKSYAVMVEAICDNTDLIYEMEKYDDVLRKKNDYISSVYEELAGEVTDEKLLL 176

Query: 180 RRRSRILTRSLRFL 193
              +  +   + F 
Sbjct: 177 AMVANQILEGVYFY 190


>gi|188996383|ref|YP_001930634.1| Ribonucleoside-diphosphate reductase [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188931450|gb|ACD66080.1| Ribonucleoside-diphosphate reductase [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 326

 Score =  114 bits (285), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 7/157 (4%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           +Y    E Y       W P E+ +Q D+  +KS   L+  E+ +    +G+FASSE LV 
Sbjct: 20  RYPIFKELYTKQKKAVWFPEELNIQQDVLDYKS---LSPTEKDLFDSAVGYFASSELLVQ 76

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
           N +    +  L++P  +     Q F E +HS  F+ I+ S  +D   ++N+  E   +  
Sbjct: 77  NVVGNGFFPVLTDPYAKMSFSTQMFMENIHSDFFEIILNSFDMDRKRIYNITLEDKLLKE 136

Query: 158 KANWALQYTQTLS----SPSFHYWNKRRRSRILTRSL 190
           K    ++    ++     P      K+  + IL  ++
Sbjct: 137 KQELIVRAVDRITYGKADPDTIEGKKQILTSILLNNI 173


>gi|34482564|emb|CAE09564.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE BETA CHAIN [Wolinella
           succinogenes]
          Length = 283

 Score =  113 bits (282), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 35/135 (25%), Positives = 65/135 (48%), Gaps = 3/135 (2%)

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D   +    GLT  E+L   R L      +SL  NN++  +  ++++PE    L+RQ
Sbjct: 1   MTPDKRDYN--GGLTPAEKLGYDRALSQLIFMDSLQTNNLIDNVNPYITSPEINLILVRQ 58

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKAN-WALQYTQTLSSPSFHYWNK 179
           AFEEA+HS ++  ++ S+  +  E++ M+R    + +K +  A  Y +   +P+     K
Sbjct: 59  AFEEALHSQSYAVMVESISANTDEIYEMWRVDMQLKSKNDHIAGVYEELAKNPTDSAMLK 118

Query: 180 RRRSRILTRSLRFLC 194
              +  +   + F  
Sbjct: 119 AMFANQILEGIYFYA 133


>gi|327409820|ref|YP_004347240.1| ribonucleoside-diphosphate reductase small chain [Lausannevirus]
 gi|326784994|gb|AEA07128.1| ribonucleoside-diphosphate reductase small chain [Lausannevirus]
          Length = 319

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 7/127 (5%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            Y     +HW+P EV    D   W+    L+ +E+   K  L FFA  + LV  N+V   
Sbjct: 20  YYQKLKKSHWIPEEVDTSKDAQDWQ---LLSKEEKSFAKLILAFFAQFDGLVVENLVRHF 76

Query: 105 YRHL--SNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD--EGELFNMYREVPSITAKAN 160
            + +     E   + + QA  E +H+ T+  +I  L       +  +      SI   A+
Sbjct: 77  QQEVSSFAKEIEWFYILQAANELIHNETYMNLINVLLPPSKRAKALDAISNYASIRKIAD 136

Query: 161 WALQYTQ 167
           W  ++  
Sbjct: 137 WVEKWMN 143


>gi|297582631|ref|YP_003698411.1| ribonucleoside-diphosphate reductase [Bacillus selenitireducens
           MLS10]
 gi|297141088|gb|ADH97845.1| Ribonucleoside-diphosphate reductase [Bacillus selenitireducens
           MLS10]
          Length = 347

 Score =  111 bits (279), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 71/172 (41%), Gaps = 7/172 (4%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
              S +     + Y   ++ Y +   N W   E+ MQDD+  W     LT  E+ +  R 
Sbjct: 26  GEASGILNWNDIAYPHMYDLYQTLLANFWKAQEINMQDDIKQWAE---LTPAEQDVFLRI 82

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEG 143
               AS +SL    +   +  ++++P  +      A +EAVH+ ++ Y+++SL    ++ 
Sbjct: 83  NTQLASLDSLQTPTMSQ-VMDYVTDPSFKAIFAIVAQQEAVHNESYSYVLSSLVNQQEQT 141

Query: 144 ELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
             F   +E P I  + +  L  Y +    PS  +  +     +    + F  
Sbjct: 142 RRFQEAKEDPLIQRRNDVILSAYERFRQHPSPQHLFELAVQSLNLEGVYFYA 193


>gi|47200896|emb|CAF87761.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 441

 Score =  111 bits (278), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 3/69 (4%)

Query: 101 VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITA 157
           V    + +   E R +   Q   E +HS  +  +I +   +  E   LFN    +P +  
Sbjct: 234 VERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKEPSEREYLFNAIETLPCVKK 293

Query: 158 KANWALQYT 166
           KA+WAL + 
Sbjct: 294 KADWALNWI 302


>gi|225850104|ref|YP_002730338.1| ribonucleoside-diphosphate reductase, beta subunit [Persephonella
           marina EX-H1]
 gi|225645787|gb|ACO03973.1| ribonucleoside-diphosphate reductase, beta subunit [Persephonella
           marina EX-H1]
          Length = 329

 Score =  111 bits (278), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 7/157 (4%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           +Y    E Y       W P E+ +Q D+  +KS   LT  E+ +   ++G+FASSE LV 
Sbjct: 23  RYPVFKEIYTKQKKAVWFPEELNIQQDVLDYKS---LTPTEKDLFDTSVGYFASSELLVQ 79

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
           N +    +  L++P  +     Q F E +HS  F+ I+ +  +D   ++N+  E   +  
Sbjct: 80  NVLGNGFFPVLTDPYAKMSFSTQMFMENIHSDFFEIILNTFEMDRKRIYNITLEDKLLME 139

Query: 158 KANWALQYTQTLS----SPSFHYWNKRRRSRILTRSL 190
           K    ++    ++     P      K+  + IL  ++
Sbjct: 140 KQELIIRAVDRITYGKADPDTLEGKKQILTAILLNNI 176


>gi|190896570|gb|ACE96798.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896582|gb|ACE96804.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  110 bits (276), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 34/97 (35%), Gaps = 16/97 (16%)

Query: 101 VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITA 157
                + +   E R +   Q   E +HS  +  ++ +   D  E   LF+    VP +  
Sbjct: 1   AGRFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAIETVPCVAK 60

Query: 158 KANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           KA WAL++     S                R + F C
Sbjct: 61  KAQWALRWIDGSES-------------FAERLVAFAC 84


>gi|190896564|gb|ACE96795.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  110 bits (276), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 16/97 (16%)

Query: 101 VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITA 157
              + + +   E R +   Q   E +HS  +  ++ +   D  E   LF+    VP +  
Sbjct: 1   AGRLMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAIETVPCVAK 60

Query: 158 KANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           KA WAL++     S                R + F C
Sbjct: 61  KAQWALRWIDGSES-------------FAERLVAFAC 84


>gi|282598964|ref|YP_003358881.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Deftia phage phiW-14]
 gi|257219034|gb|ACV50049.1| bifunctional gluaredoxin/ribonucleoside-diphosphate reductase
           subunit beta [Deftia phage phiW-14]
          Length = 346

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 8/152 (5%)

Query: 23  RMLNARSDVNQL----LPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
           R+ ++ S + Q+     P  Y   ++      + HW+  E  + DD+  W++++  +DDE
Sbjct: 2   RVADSESKLFQVSSTYKPFLYQEFYDLMTKHEDAHWVKQEAELGDDVNDWRNRS--SDDE 59

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           R  IK  L  F   + +VA+N          N E   +L+  A  E +H   +     + 
Sbjct: 60  RSFIKEILTVFTQGDVVVADNYKSIFIPAFKNNEVSNWLVGVAAREVIHQDAYAMANETF 119

Query: 139 GLDEGELFNMYREVPSITAKAN-WALQYTQTL 169
           GL +  +F  +RE   +  + +  A QY  ++
Sbjct: 120 GLPDS-MFGRFREYQEMRERNDLMATQYDPSM 150


>gi|68171256|ref|ZP_00544659.1| Ribonucleoside-diphosphate reductase [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|67999338|gb|EAM85984.1| Ribonucleoside-diphosphate reductase [Ehrlichia chaffeensis str.
           Sapulpa]
          Length = 294

 Score =  109 bits (274), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 54/120 (45%), Gaps = 3/120 (2%)

Query: 56  PTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQ 115
           P EVP+ DD+  WK+   L++ E+ ++ +   FF  ++  V N  +          E   
Sbjct: 2   PEEVPLADDVQDWKT--VLSEKEKNLLVQIFRFFTQADIEVNNCYMKHYSNIFKPTEVCM 59

Query: 116 YLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFH 175
            L   +  E +H   + Y++ ++G+ E E +  + +   +  K ++  ++ +   +   H
Sbjct: 60  MLSAFSNMETIHIAAYSYLLDTIGMPEIE-YQAFLKFEVMKKKYDYMQRFEECRKNDKRH 118


>gi|269862477|ref|XP_002650854.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220065515|gb|EED43201.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 122

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 3/97 (3%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L+       + P++Y   WE Y    +  W   EV M  D   +   + LT +E+  
Sbjct: 26  EPLLDEAKKRYVIFPIQYPEIWEFYKMHESTFWTVEEVDMTFDCEHF---STLTPNEQFF 82

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLL 118
           IK  L FFA+S+ +V  N+V      +   E + +  
Sbjct: 83  IKYVLAFFAASDGIVNENLVERFSSEVQILEAKMFYG 119


>gi|190896572|gb|ACE96799.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896574|gb|ACE96800.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896576|gb|ACE96801.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896578|gb|ACE96802.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  109 bits (272), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 34/97 (35%), Gaps = 16/97 (16%)

Query: 101 VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITA 157
                + +   E R +   Q   E +HS  +  ++ +   D  E   LF+    VP +  
Sbjct: 1   AGRFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60

Query: 158 KANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           KA WAL++     S                R + F C
Sbjct: 61  KAQWALRWIDGSES-------------FAERLVAFAC 84


>gi|190896568|gb|ACE96797.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896580|gb|ACE96803.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  109 bits (272), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 34/97 (35%), Gaps = 16/97 (16%)

Query: 101 VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITA 157
                + +   E R +   Q   E +HS  +  ++ +   D  E   LF+    VP +  
Sbjct: 1   AGRFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60

Query: 158 KANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           KA WAL++     S                R + F C
Sbjct: 61  KAQWALRWIDGSES-------------FAERLVAFAC 84


>gi|190896538|gb|ACE96782.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896548|gb|ACE96787.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896558|gb|ACE96792.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  109 bits (272), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 16/97 (16%)

Query: 101 VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITA 157
              + + +   E R +   Q   E +HS  +  ++ +   D  E   LF+    VP +  
Sbjct: 1   AGRLMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60

Query: 158 KANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           KA WAL++     S                R + F C
Sbjct: 61  KAQWALRWIDGSES-------------FAERLVAFAC 84


>gi|190896550|gb|ACE96788.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  109 bits (272), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 16/97 (16%)

Query: 101 VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITA 157
              + + +   E R +   Q   E +HS  +  ++ +   D  E   LF+    VP +  
Sbjct: 1   AGRLMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60

Query: 158 KANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           KA WAL++     S                R + F C
Sbjct: 61  KAQWALRWIDGSES-------------FAERLVAFAC 84


>gi|323487827|ref|ZP_08093085.1| ribonucleotide-diphosphate reductase subunit beta [Planococcus
           donghaensis MPA1U2]
 gi|323398561|gb|EGA91349.1| ribonucleotide-diphosphate reductase subunit beta [Planococcus
           donghaensis MPA1U2]
          Length = 348

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 75/184 (40%), Gaps = 7/184 (3%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
            +  N     +    S +     + Y   ++ Y +   N W   E+ MQDD+  W   + 
Sbjct: 15  PEHPNKSTGVLNGQSSGLLNWNDIAYPQMYDLYQALLANFWKAQEINMQDDIKQW---DS 71

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           L+  E+ +  R     AS +SL    +  A   ++++   +      + +EAVH+ ++ Y
Sbjct: 72  LSSVEKDVFLRINTQLASLDSLQTPTMSQA-MDYVTDSSFKAIFAVISQQEAVHTESYSY 130

Query: 134 IITSL--GLDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSL 190
           I++SL    ++ E FN  +  P +  +    L  Y +   +P+     K   + I    +
Sbjct: 131 ILSSLVSVSEQNERFNQAKSDPVVQKRNELILDAYEEFRQNPTPQNLFKLSVNSINLEGI 190

Query: 191 RFLC 194
            F  
Sbjct: 191 YFYA 194


>gi|488081|gb|AAA56996.1| ribonucleoside-diphosphate reductase small subunit [Drosophila
           melanogaster]
          Length = 214

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 7/96 (7%)

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSIT 156
           +V    + +   E R +   Q   E VHS  +  +I +   D  +   LFN    +P++ 
Sbjct: 1   LVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYIRDPHQREYLFNAIETMPAVK 60

Query: 157 AKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
            KA+WAL +  + S+     + +R  +      + F
Sbjct: 61  RKADWALSWISSKSA----NFGERIIAFAAVEGIFF 92


>gi|190896520|gb|ACE96773.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 16/97 (16%)

Query: 101 VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITA 157
              + + +   E R +   Q   E +HS  +  ++ +   D  E   LF+    VP +  
Sbjct: 1   AGRLMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAIETVPCVAK 60

Query: 158 KANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           KA WAL++     S                R + F C
Sbjct: 61  KAQWALRWIDGSES-------------CAERLVAFAC 84


>gi|190896552|gb|ACE96789.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  108 bits (270), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 16/97 (16%)

Query: 101 VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITA 157
              + + +   E R +   Q   E +HS  +  ++ +   D  E   LF+    VP +  
Sbjct: 1   AGRLMKEVHVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAIETVPCVAK 60

Query: 158 KANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           KA WAL++     S                R + F C
Sbjct: 61  KAQWALRWIDGSES-------------FAERLVAFAC 84


>gi|229916488|ref|YP_002885134.1| ribonucleotide-diphosphate reductase subunit beta [Exiguobacterium
           sp. AT1b]
 gi|229467917|gb|ACQ69689.1| Ribonucleoside-diphosphate reductase [Exiguobacterium sp. AT1b]
          Length = 346

 Score =  108 bits (269), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 76/183 (41%), Gaps = 7/183 (3%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
            K  N     +    S +     + Y   +  Y    +N W+P E+ M  D+  W     
Sbjct: 11  PKHPNRATAIIGGETSSIVNWNDIAYPQFYTIYKQLLSNFWIPDEISMSKDMQQWPQ--- 67

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           LT+ E+   KR +G  +  +S+    I+ +     S+      L   A +E VH+ ++ Y
Sbjct: 68  LTEREQDAFKRIIGLLSILDSVQTRYILESSMFS-SDSSVHAVLAVIAQQEVVHNQSYSY 126

Query: 134 IITSLGL--DEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSL 190
           +++SL    ++  +FN+ ++   +  +  + L  Y     +P+   + K   + ++   +
Sbjct: 127 VLSSLVPLAEQNRIFNIAKDDEMVMKRNQFILDLYEAFRETPNAENFAKSLVASVILEGI 186

Query: 191 RFL 193
            F 
Sbjct: 187 NFY 189


>gi|190896524|gb|ACE96775.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896534|gb|ACE96780.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  108 bits (269), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 16/97 (16%)

Query: 101 VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITA 157
              + + +   E R +   Q   E +HS  +  ++ +   D  E   LF+    VP +  
Sbjct: 1   AGRLMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60

Query: 158 KANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           KA WAL++     S                R + F C
Sbjct: 61  KAQWALRWIDGSES-------------FAERLVAFAC 84


>gi|71280050|ref|YP_269047.1| ribonucleotide-diphosphate reductase subunit beta [Colwellia
           psychrerythraea 34H]
 gi|71145790|gb|AAZ26263.1| ribonucleotide reductase, beta subunit [Colwellia psychrerythraea
           34H]
          Length = 376

 Score =  107 bits (268), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 64/132 (48%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           +Y    +      +  W P EV +  D A W+S   LTD E+ +   NL +    +S+ A
Sbjct: 33  RYIAFEKLIEKQLSFFWRPEEVDVSKDRADWQS---LTDSEKHIFISNLKYQTLLDSMAA 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            ++   +   +S PE   ++   AF E +HS ++ +I+ +L  + GE+F+     P+I  
Sbjct: 90  RSVNAVLLPLVSLPEVETWVETWAFSETIHSRSYTHILRNLFTEPGEIFDDIIVNPAILK 149

Query: 158 KANWALQYTQTL 169
           +A+   ++   +
Sbjct: 150 RASSIAKFFDDV 161


>gi|13358428|ref|NP_078636.1| Ribonucleotide reductase small subunit [Lymphocystis disease virus
           1]
          Length = 378

 Score =  107 bits (267), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 51/130 (39%), Gaps = 2/130 (1%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
              P  Y WA E      N HW   E+ + DD++ WK+   LT  E+  I + L  F   
Sbjct: 71  VFKPFHYSWAVEIRALHENIHWTEKELSLADDVSDWKT-GKLTLFEKDFIIQILRLFTQL 129

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
           +  V +           N E R  L   A  E  H   +  +  +LGL E E ++ +   
Sbjct: 130 DVSVGHIYHNIFIPIFKNNELRNMLCSFACREGTHQQAYALLNDTLGLPETE-YSTFLNY 188

Query: 153 PSITAKANWA 162
             +T K  + 
Sbjct: 189 KEMTNKTIYM 198


>gi|157375444|ref|YP_001474044.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           sediminis HAW-EB3]
 gi|157317818|gb|ABV36916.1| Ribonucleoside-diphosphate reductase [Shewanella sediminis HAW-EB3]
          Length = 376

 Score =  107 bits (267), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 70/159 (44%), Gaps = 3/159 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
               K   + +   L    +V++    K+    +      +  W P E+ +  D A W+ 
Sbjct: 6   FNQVKNDQLLEPMFLGNSVNVSRYDQQKHVSFEKLIEKQLSFFWRPEEIDISKDRADWQ- 64

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              LT+ E+ +   NL +    +S+ A ++   +   +S PE   ++   AF E +HS +
Sbjct: 65  --RLTESEKHIFISNLKYQTLLDSMAARSVNAVLLPLVSLPEVETWVETWAFSETIHSRS 122

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           + +I+ +L  + GE+F+     P+I  +A    +Y   +
Sbjct: 123 YTHILRNLFTEPGEVFDDIVVNPAILKRATSIAKYFDDV 161


>gi|190896510|gb|ACE96768.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896556|gb|ACE96791.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896562|gb|ACE96794.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  106 bits (266), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 16/97 (16%)

Query: 101 VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITA 157
              + + +   E R +   Q   E +HS  +  ++ +   D  E   LF+    VP +  
Sbjct: 1   AGRLMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60

Query: 158 KANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           KA WAL++     S                R + F C
Sbjct: 61  KAQWALRWIDGSES-------------CAERLVAFAC 84


>gi|149197800|ref|ZP_01874849.1| ribonucleotide-diphosphate reductase beta subunit [Lentisphaera
           araneosa HTCC2155]
 gi|149139021|gb|EDM27425.1| ribonucleotide-diphosphate reductase beta subunit [Lentisphaera
           araneosa HTCC2155]
          Length = 376

 Score =  106 bits (265), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 65/160 (40%), Gaps = 3/160 (1%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           I +      + +        +V++    K+    +      +  W P EV +  D A +K
Sbjct: 5   IFSQVPNDPLKEPMFFGNNVNVSRYDQQKHPVFEQLIEKQLSFFWRPEEVDLSRDRADFK 64

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
               L   E+ +   NL +    +S+   +  +A    +S PE   ++   AF E +HS 
Sbjct: 65  K---LPAHEKHIFLSNLKYQTLLDSVQGRSPNVAFLPVISIPELETWVETWAFSETIHSR 121

Query: 130 TFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           ++ +II ++  D  E+F+      SI  +A+    Y  + 
Sbjct: 122 SYTHIIRNIVNDPSEIFDDIVNNESIIQRASSVSHYYDSF 161


>gi|172058301|ref|YP_001814761.1| ribonucleotide-diphosphate reductase subunit beta [Exiguobacterium
           sibiricum 255-15]
 gi|171990822|gb|ACB61744.1| Ribonucleoside-diphosphate reductase [Exiguobacterium sibiricum
           255-15]
          Length = 347

 Score =  106 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 73/171 (42%), Gaps = 7/171 (4%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
              S +     + Y   +  Y    +N W+P E+ M  D+  W   N L++ E+   KR 
Sbjct: 24  GETSSIVNWNDIAYPQFYSIYKQLLSNFWIPDEISMSKDMQQW---NQLSEREQDAFKRI 80

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEG 143
           +G  +  +S+    I+ +     S+      L   A +E VH+ ++ Y+++SL    ++ 
Sbjct: 81  IGLLSILDSVQTRYILES-AMFTSDASIHAILAIVAQQEVVHNQSYSYVLSSLVPLSEQN 139

Query: 144 ELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            +F++ ++   +  +  + L  Y    +  +   + K   + I+   + F 
Sbjct: 140 RIFDIAKDDDMVMKRNAFILDLYEDFQNDRTPENFAKSLVASIVLEGINFY 190


>gi|190896512|gb|ACE96769.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896530|gb|ACE96778.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  105 bits (263), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 16/97 (16%)

Query: 101 VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITA 157
              + + +   E R +   Q   E +HS  +  ++ +   D  E   LF+    VP +  
Sbjct: 1   AGRLMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60

Query: 158 KANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           KA WAL++     S                R + F C
Sbjct: 61  KAQWALRWIDGSES-------------CAERLVAFAC 84


>gi|89092731|ref|ZP_01165684.1| ribonucleotide-diphosphate reductase beta subunit [Oceanospirillum
           sp. MED92]
 gi|89083243|gb|EAR62462.1| ribonucleotide-diphosphate reductase beta subunit [Oceanospirillum
           sp. MED92]
          Length = 376

 Score =  105 bits (263), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 54/132 (40%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   +     + + E+ +   NL +    +S+  
Sbjct: 33  KYPIFEKLIEKQLSFFWRPEEVDLSTDRKDF---MNMPEHEKHIFLSNLKYQTLLDSVQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A    +S PE   +    AF E +HS ++ +II ++  +  E+F+     P I  
Sbjct: 90  RSPNIAFLPVVSLPELETWFETWAFSETIHSRSYTHIIRNIITEPSEVFDQIVTNPEIIR 149

Query: 158 KANWALQYTQTL 169
           +A+   +     
Sbjct: 150 RADSVTRLYDEF 161


>gi|167461830|ref|ZP_02326919.1| ribonucleoside-diphosphate reductase beta subunit [Paenibacillus
           larvae subsp. larvae BRL-230010]
 gi|322383591|ref|ZP_08057349.1| ribonucleotide-diphosphate reductase subunit beta-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
 gi|321152059|gb|EFX44995.1| ribonucleotide-diphosphate reductase subunit beta-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
          Length = 343

 Score =  105 bits (262), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 78/179 (43%), Gaps = 7/179 (3%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           N  DK +  + S +     ++    ++ Y     NHW+P+E+PM  D   ++    LT  
Sbjct: 14  NKSDKLIEGSCSSILNWDDIRKPEMYKLYKVLIANHWIPSEIPMNKDKLQFEQ---LTAQ 70

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+   K+ +G  A  +S+   N V  +  + ++            +E +H+ ++ Y+++S
Sbjct: 71  EQETYKKIIGLLAVLDSMQT-NFVTDVGNYFTDSSLVAIAAIINQQEVIHNQSYSYVLSS 129

Query: 138 LGLDE--GELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           +   E   E+F  +++   +  +  +  + Y +    P+   + +   + ++   + F 
Sbjct: 130 ITNYEVQKEVFEYWKKDEILLERNLFIAELYQRFRDEPTPATFFEAVVADMILEGIFFY 188


>gi|190896516|gb|ACE96771.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  104 bits (261), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 34/97 (35%), Gaps = 16/97 (16%)

Query: 101 VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITA 157
              + + +   E R +   Q   E + S  +  ++ +   D  E   LF+    VP +  
Sbjct: 1   AGRLMKEVQVSEARAFYGFQIAIENIRSEMYSLLLETYIKDSEEKNRLFHAIETVPCVAK 60

Query: 158 KANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           KA WAL++     S                R + F C
Sbjct: 61  KAQWALRWIDGSES-------------FAERLVAFAC 84


>gi|325919223|ref|ZP_08181270.1| ribonucleotide reductase, beta subunit [Xanthomonas gardneri ATCC
           19865]
 gi|325923021|ref|ZP_08184721.1| ribonucleotide reductase, beta subunit [Xanthomonas gardneri ATCC
           19865]
 gi|325546491|gb|EGD17645.1| ribonucleotide reductase, beta subunit [Xanthomonas gardneri ATCC
           19865]
 gi|325550297|gb|EGD21104.1| ribonucleotide reductase, beta subunit [Xanthomonas gardneri ATCC
           19865]
          Length = 347

 Score =  104 bits (261), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 74/194 (38%), Gaps = 8/194 (4%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
            T L  I+  E R       ++N ++  +     + Y   +  Y     N W+P EV M+
Sbjct: 3   ATPLERIKILEPRHPNRSTAIINGQTSGILNWNDIPYPSFYRAYKELSTNFWIPDEVDMK 62

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D   +   N L+  E+      +G  A+ +S     I   +  ++++P           
Sbjct: 63  GDARQY---NELSAREKNAYDSIIGLLATLDSPQTRFIY-NVAEYITDPAAHANAAIIGQ 118

Query: 123 EEAVHSHTFQYIITSLG--LDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNK 179
           +E +H+ ++ Y++ S+    D+  +F + R  P+I  +    +  Y   L   +     +
Sbjct: 119 QEVIHNESYSYVLASITGLADQNRVFELARTHPTIIKRNAPIMGAYDDFLRDKTAETLIR 178

Query: 180 RRRSRILTRSLRFL 193
                 +   + F 
Sbjct: 179 ALIQSSILEGINFY 192


>gi|190896528|gb|ACE96777.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  104 bits (260), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 35/97 (36%), Gaps = 16/97 (16%)

Query: 101 VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITA 157
              + + +   E R +   Q   + +HS  +  ++ +   D  E   LF+    VP +  
Sbjct: 1   AGRLMKEVQVSEARAFYGFQIAIDNIHSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60

Query: 158 KANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           KA WAL++     S                R + F C
Sbjct: 61  KAQWALRWIDGSES-------------FAERLVAFAC 84


>gi|325914792|ref|ZP_08177129.1| ribonucleotide reductase, beta subunit [Xanthomonas vesicatoria
           ATCC 35937]
 gi|325538985|gb|EGD10644.1| ribonucleotide reductase, beta subunit [Xanthomonas vesicatoria
           ATCC 35937]
          Length = 349

 Score =  104 bits (259), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 74/194 (38%), Gaps = 8/194 (4%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
            T L  I+  E R       ++N ++  +     + Y   +  Y     N W+P EV M+
Sbjct: 5   ATPLERIKILEPRHPNRSTSIINGQTSGILNWNDIPYPSFYRAYKELSTNFWIPDEVDMK 64

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D   +   N L+  E+      +G  A+ +S     I   +  ++++P           
Sbjct: 65  GDARQY---NELSSREKNAYDSIIGLLATLDSPQTRFIY-NVAEYITDPAAHANAAIIGQ 120

Query: 123 EEAVHSHTFQYIITSLG--LDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNK 179
           +E +H+ ++ Y++ S+    D+  +F + R  P+I  +    +  Y   +   +     +
Sbjct: 121 QEVIHNESYSYVLASITGLADQNRVFEIARTHPTIIKRNAPIMGAYEDFMRDKTAETLIR 180

Query: 180 RRRSRILTRSLRFL 193
                 +   + F 
Sbjct: 181 ALIQSSILEGINFY 194


>gi|21233407|ref|NP_639324.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           campestris pv. campestris str. ATCC 33913]
 gi|21115247|gb|AAM43206.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas
           campestris pv. campestris str. ATCC 33913]
          Length = 347

 Score =  104 bits (259), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 74/194 (38%), Gaps = 8/194 (4%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
            T L  I+  E R       ++N ++  +     + Y   +  Y     N W+P EV M+
Sbjct: 3   ATPLERIKILEPRHPNRSTAIINGQTSGILNWNDIPYPSFYRAYKELSTNFWIPDEVDMK 62

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D   +   N L+  E+      +G  A+ +S     I   +  ++++P           
Sbjct: 63  GDARQY---NELSAREKNAYDSIIGLLATLDSPQTRFIY-NVAEYITDPAAHANAAIIGQ 118

Query: 123 EEAVHSHTFQYIITSLG--LDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNK 179
           +E +H+ ++ Y++ S+    D+  +F + R  P+I  +    +  Y   +   +     +
Sbjct: 119 QEVIHNESYSYVLASITGLADQNRVFEIARTHPTIIKRNAPIMGAYDDFMRDKTAETLIR 178

Query: 180 RRRSRILTRSLRFL 193
                 +   + F 
Sbjct: 179 ALIQSSILEGINFY 192


>gi|289664735|ref|ZP_06486316.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           campestris pv. vasculorum NCPPB702]
          Length = 349

 Score =  104 bits (259), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 74/194 (38%), Gaps = 8/194 (4%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
            T L  I+  E R       ++N ++  +     + Y   +  Y     N W+P EV M+
Sbjct: 5   ATPLERIKILEPRHPNRSTSIINGQTSGILNWNDIPYPSFYRAYKELSTNFWIPDEVDMK 64

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D   +   N L+  E+      +G  A+ +S     I   +  ++++P           
Sbjct: 65  GDARQY---NELSAREKNAYDSIIGLLATLDSPQTRFIY-NVAEYITDPAAHANAAIIGQ 120

Query: 123 EEAVHSHTFQYIITSLG--LDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNK 179
           +E +H+ ++ Y++ S+    D+  +F + R  P+I  +    +  Y   +   +     +
Sbjct: 121 QEVIHNESYSYVLASITGLADQNRVFEIARTHPTIIKRNAPIMGAYEDFMRDKTAETLIR 180

Query: 180 RRRSRILTRSLRFL 193
                 +   + F 
Sbjct: 181 ALIQSSILEGINFY 194


>gi|190896544|gb|ACE96785.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  104 bits (259), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 34/97 (35%), Gaps = 16/97 (16%)

Query: 101 VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITA 157
              + + +   E R +   Q   E + S  +  ++ +   D  E   LF+    VP +  
Sbjct: 1   AGRLMKEVQVSEARAFYGFQIAIENIRSEMYSLLLETYIKDSEEKNRLFHAIETVPCVAK 60

Query: 158 KANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           KA WAL++     S                R + F C
Sbjct: 61  KAQWALRWIDGSES-------------FAERLVAFAC 84


>gi|66770372|ref|YP_245134.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           campestris pv. campestris str. 8004]
 gi|188993572|ref|YP_001905582.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           campestris pv. campestris str. B100]
 gi|66575704|gb|AAY51114.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas
           campestris pv. campestris str. 8004]
 gi|167735332|emb|CAP53546.1| Ribonucleoside-diphosphate reductase beta chain [Xanthomonas
           campestris pv. campestris]
          Length = 347

 Score =  103 bits (258), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 73/194 (37%), Gaps = 8/194 (4%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
            T L  I+  E R       ++N  +  +     + Y   +  Y     N W+P EV M+
Sbjct: 3   ATPLERIKILEPRHPNRSTAIINGSTSGILNWNDIPYPSFYRAYKELSTNFWIPDEVDMK 62

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D   +   N L+  E+      +G  A+ +S     I   +  ++++P           
Sbjct: 63  GDARQY---NELSAREKNAYDSIIGLLATLDSPQTRFIY-NVAEYITDPAAHANAAIIGQ 118

Query: 123 EEAVHSHTFQYIITSLG--LDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNK 179
           +E +H+ ++ Y++ S+    D+  +F + R  P+I  +    +  Y   +   +     +
Sbjct: 119 QEVIHNESYSYVLASITGLADQNRVFEIARTHPTIIKRNAPIMGAYDDFMRDKTAETLIR 178

Query: 180 RRRSRILTRSLRFL 193
                 +   + F 
Sbjct: 179 ALIQSSILEGINFY 192


>gi|152997008|ref|YP_001341843.1| ribonucleotide-diphosphate reductase subunit beta [Marinomonas sp.
           MWYL1]
 gi|150837932|gb|ABR71908.1| Ribonucleoside-diphosphate reductase [Marinomonas sp. MWYL1]
          Length = 377

 Score =  103 bits (258), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 62/147 (42%), Gaps = 3/147 (2%)

Query: 23  RMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMI 82
                  +V +    K+    +      +  W P EV +  D   ++    L + E+ + 
Sbjct: 18  MFFGENVNVARYDQQKHPIFEKLIEKQLSFFWRPEEVDLSTDRKDFQ---RLEEHEQHIF 74

Query: 83  KRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE 142
             NL +    +S+   +  +A+   +S PE   ++   +F E +HS ++ +II ++  D 
Sbjct: 75  LSNLKYQTLLDSVQGRSPNVALLPIVSLPELETWIETWSFSETIHSRSYTHIIRNIVNDP 134

Query: 143 GELFNMYREVPSITAKANWALQYTQTL 169
            ++F+       IT +A+   +Y   L
Sbjct: 135 TKIFDDIVTNEEITKRADSVSKYYDRL 161


>gi|190896532|gb|ACE96779.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896554|gb|ACE96790.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 34/97 (35%), Gaps = 16/97 (16%)

Query: 101 VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITA 157
              + + +   E R +   Q   E + S  +  ++ +   D  E   LF+    VP +  
Sbjct: 1   AGRLMKEVQVSEARAFYGFQIAIENIRSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60

Query: 158 KANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           KA WAL++     S                R + F C
Sbjct: 61  KAQWALRWIDGSES-------------FAERLVAFAC 84


>gi|190896526|gb|ACE96776.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 34/97 (35%), Gaps = 16/97 (16%)

Query: 101 VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITA 157
              + + +   E R +   Q   E + S  +  ++ +   D  E   LF+    VP +  
Sbjct: 1   AGRLMKEVQVSEARAFYGFQIAIENIRSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60

Query: 158 KANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           KA WAL++     S                R + F C
Sbjct: 61  KAQWALRWIDGSES-------------FAERLVAFAC 84


>gi|291092706|gb|ADD74390.1| ribonucleotide reductase small subunit [uncultured virus]
          Length = 181

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 15/117 (12%)

Query: 80  LMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
              K  L FFA S+ +V  N+V   Y  +   E R +   QA  E +H+  +  +I +L 
Sbjct: 1   DFFKCILAFFAPSDGIVGENLVTRFYEMVVYTEARYFYAFQAAMENIHAEVYSQLIKTLI 60

Query: 140 LDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            +E E   +F+ +   P IT K  WA Q+ +            R     + R + F 
Sbjct: 61  PNEDEQRSIFSSFMTTPGITEKTRWAKQWLE------------RENLSFVERLVAFA 105


>gi|289670858|ref|ZP_06491933.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           campestris pv. musacearum NCPPB4381]
          Length = 349

 Score =  103 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 74/194 (38%), Gaps = 8/194 (4%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
            T L  I+  E R       ++N ++  +     + Y   +  Y     N W+P EV M+
Sbjct: 5   ATPLERIKILEPRHPNRSTSIINGQTSGILNWNDIPYPSFYRAYKELSTNFWIPDEVDMK 64

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D   +   N L+  E+      +G  A+ +S     I   +  ++++P           
Sbjct: 65  GDARQY---NELSAREKNAYDSIIGLLATLDSPQTRFIY-NVAEYITDPAAHANAAIIGQ 120

Query: 123 EEAVHSHTFQYIITSLG--LDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNK 179
           +E +H+ ++ Y++ S+    D+  +F + R  P+I  +    +  Y   +   +     +
Sbjct: 121 QEVIHNESYSYVLASITGLADQNRVFEIARTHPTIIKRNAPIMGAYEDFMREKTAETLIR 180

Query: 180 RRRSRILTRSLRFL 193
                 +   + F 
Sbjct: 181 SLIQSSILEGINFY 194


>gi|188578920|ref|YP_001915849.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           oryzae pv. oryzae PXO99A]
 gi|188523372|gb|ACD61317.1| ribonucleoside-diphosphate reductase, beta subunit [Xanthomonas
           oryzae pv. oryzae PXO99A]
          Length = 347

 Score =  103 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 74/194 (38%), Gaps = 8/194 (4%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
            T L  I+  E R       +LN ++  +     + Y   +  Y     N W+P EV M+
Sbjct: 3   ATPLERIKILEPRHPNRSTSILNGQTSGILNWNDIPYPSFYRAYKELSTNFWIPDEVDMK 62

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D   +   N L+  E+      +G  A+ +S     I   +  ++++P           
Sbjct: 63  GDARQY---NELSAREKNAYDSIIGLLATLDSPQTRFIY-NVAEYITDPAAHANAAIIGQ 118

Query: 123 EEAVHSHTFQYIITSLG--LDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNK 179
           +E +H+ ++ Y++ S+    D+  +F + R  P+I  +    +  Y   +   +     +
Sbjct: 119 QEVIHNESYSYVLASITGLADQNRVFEIARTHPTIIKRNAPIMGAYEDFMREKTAETLIR 178

Query: 180 RRRSRILTRSLRFL 193
                 +   + F 
Sbjct: 179 SLIQSSILEGINFY 192


>gi|254992907|ref|ZP_05275097.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes FSL J2-064]
          Length = 229

 Score =  103 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 79/198 (39%), Gaps = 9/198 (4%)

Query: 1   MANN-TGLSPIQAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTE 58
           MAN    L+ I+  E         ++N  +  +     + Y   +  Y     N+W+P E
Sbjct: 1   MANQKEQLTRIKILEPLFPNRSTSIINGETSGILNWNDIPYPSFYRAYKELSTNYWIPDE 60

Query: 59  VPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLL 118
           V M+ D   +     L++ E+      +G  A+ +S     I   I  ++++P       
Sbjct: 61  VDMKSDAKQY---PALSEQEKYAFDAIIGLLATLDSPQTRFIY-NIAEYITDPAVHANAA 116

Query: 119 RQAFEEAVHSHTFQYIITSLG--LDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFH 175
             A +E +H+ ++ Y++ S+    ++  +F + R  P+I  +    +  Y   +++ +  
Sbjct: 117 IIAQQEVIHNESYSYVLASITNLQEQNRVFELARTHPTIIKRNEPIMDAYDDFMNNKTGE 176

Query: 176 YWNKRRRSRILTRSLRFL 193
              K      +   + F 
Sbjct: 177 TLVKALIQSSILEGINFY 194


>gi|290508492|ref|ZP_06547863.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella sp.
           1_1_55]
 gi|289777886|gb|EFD85883.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella sp.
           1_1_55]
          Length = 405

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 62  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 118

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 119 RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPATVFDDIVTNEQIQK 178

Query: 158 KANWALQYTQTL 169
           +A     Y  +L
Sbjct: 179 RAEGISHYYDSL 190


>gi|94499220|ref|ZP_01305758.1| ribonucleotide-diphosphate reductase beta subunit [Oceanobacter sp.
           RED65]
 gi|94428852|gb|EAT13824.1| ribonucleotide-diphosphate reductase beta subunit [Oceanobacter sp.
           RED65]
          Length = 376

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 61/147 (41%), Gaps = 3/147 (2%)

Query: 23  RMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMI 82
                  +V++    KY    +      +  W P EV +  D   +     L + E+ + 
Sbjct: 18  MFFGENVNVSRYDTQKYKIFEQLIEKQLSFFWRPEEVDLSTDRKDFA---ALPEHEKHIF 74

Query: 83  KRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE 142
             NL +    +S+   +  +A+   +S PE   ++   +F E +HS ++ +II ++  D 
Sbjct: 75  LSNLKYQTLLDSIQGRSPNVALLPIVSLPELETWIETWSFSETIHSRSYTHIIRNVISDP 134

Query: 143 GELFNMYREVPSITAKANWALQYTQTL 169
            ++F+       IT +A    +Y   L
Sbjct: 135 SKVFDDIVSNEYITKRAESVTKYYDDL 161


>gi|58580098|ref|YP_199114.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           oryzae pv. oryzae KACC10331]
 gi|84622097|ref|YP_449469.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           oryzae pv. oryzae MAFF 311018]
 gi|58424692|gb|AAW73729.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas oryzae
           pv. oryzae KACC10331]
 gi|84366037|dbj|BAE67195.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas oryzae
           pv. oryzae MAFF 311018]
          Length = 347

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 74/194 (38%), Gaps = 8/194 (4%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
            T L  I+  E R       ++N ++  +     + Y   +  Y     N W+P EV M+
Sbjct: 3   ATPLERIKILEPRHPNRSTSIINGQTSGILNWNDIPYPSFYRAYKELSTNFWIPDEVDMK 62

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D   +   N L+  E+      +G  A+ +S     I   +  ++++P           
Sbjct: 63  GDARQY---NELSAREKNAYDSIIGLLATLDSPQTRFIY-NVAEYITDPAAHANAAIIGQ 118

Query: 123 EEAVHSHTFQYIITSLG--LDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNK 179
           +E +H+ ++ Y++ S+    D+  +F + R  P+I  +    +  Y   +   +     +
Sbjct: 119 QEVIHNESYSYVLASITGLADQNRVFEIARTHPTIIKRNAPIMGAYEDFMREKTAETLIR 178

Query: 180 RRRSRILTRSLRFL 193
                 +   + F 
Sbjct: 179 SLIQSSILEGINFY 192


>gi|294625675|ref|ZP_06704297.1| ribonucleotide-diphosphate reductase beta subunit [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 11122]
 gi|294664800|ref|ZP_06730124.1| ribonucleotide-diphosphate reductase beta subunit [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 10535]
 gi|292600044|gb|EFF44159.1| ribonucleotide-diphosphate reductase beta subunit [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 11122]
 gi|292605431|gb|EFF48758.1| ribonucleotide-diphosphate reductase beta subunit [Xanthomonas
           fuscans subsp. aurantifolii str. ICPB 10535]
          Length = 347

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 74/194 (38%), Gaps = 8/194 (4%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
            T L  I+  E R       ++N ++  +     + Y   +  Y     N W+P EV M+
Sbjct: 3   ATPLDRIKILEPRNPNRSTGIINGQTSGILNWNDIPYPSFYRAYKELSTNFWIPDEVDMK 62

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D   +   N L+  E+      +G  A+ +S     I   +  ++++P           
Sbjct: 63  GDARQY---NELSAREKNAYDSIIGLLATLDSPQTRFIY-NVAEYITDPAAHANAAIIGQ 118

Query: 123 EEAVHSHTFQYIITSLG--LDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNK 179
           +E +H+ ++ Y++ S+    D+  +F + R  P+I  +    +  Y   +   +     +
Sbjct: 119 QEVIHNESYSYVLASITGLADQNRVFEIARTHPTIIKRNAPIMGAYEDFMREKTAETLIR 178

Query: 180 RRRSRILTRSLRFL 193
                 +   + F 
Sbjct: 179 SLIQSSILEGINFY 192


>gi|21244791|ref|NP_644373.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           axonopodis pv. citri str. 306]
 gi|325927516|ref|ZP_08188754.1| ribonucleotide reductase, beta subunit [Xanthomonas perforans
           91-118]
 gi|21110489|gb|AAM38909.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas
           axonopodis pv. citri str. 306]
 gi|325542109|gb|EGD13613.1| ribonucleotide reductase, beta subunit [Xanthomonas perforans
           91-118]
          Length = 347

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 74/194 (38%), Gaps = 8/194 (4%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
            T L  I+  E R       ++N ++  +     + Y   +  Y     N W+P EV M+
Sbjct: 3   ATPLDRIKILEPRNPNRSTGIINGQTSGILNWNDIPYPSFYRAYKELSTNFWIPDEVDMK 62

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D   +   N L+  E+      +G  A+ +S     I   +  ++++P           
Sbjct: 63  GDARQY---NELSAREKNAYDSIIGLLATLDSPQTRFIY-NVAEYITDPAAHANAAIIGQ 118

Query: 123 EEAVHSHTFQYIITSLG--LDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNK 179
           +E +H+ ++ Y++ S+    D+  +F + R  P+I  +    +  Y   +   +     +
Sbjct: 119 QEVIHNESYSYVLASITGLADQNRVFEIARTHPTIIKRNAPIMGAYEDFMREKTAETLIR 178

Query: 180 RRRSRILTRSLRFL 193
                 +   + F 
Sbjct: 179 SLIQSSILEGINFY 192


>gi|78049716|ref|YP_365891.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
 gi|78038146|emb|CAJ25891.1| ribonucleoside-diphosphate reductase beta chain [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
          Length = 347

 Score =  102 bits (255), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 74/194 (38%), Gaps = 8/194 (4%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
            T L  I+  E R       ++N ++  +     + Y   +  Y     N W+P EV M+
Sbjct: 3   ATPLDRIKILEPRNPNRSTGIINGQTSGILNWNDIPYPSFYRAYKELSTNFWIPDEVDMK 62

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D   +   N L+  E+      +G  A+ +S     I   +  ++++P           
Sbjct: 63  GDARQY---NELSAREKNAYDSIIGLLATLDSPQTRFIY-NVAEYITDPAAHANAAIIGQ 118

Query: 123 EEAVHSHTFQYIITSLG--LDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNK 179
           +E +H+ ++ Y++ S+    D+  +F + R  P+I  +    +  Y   +   +     +
Sbjct: 119 QEVIHNESYSYVLASITGLADQNRVFEIARTHPTIIKRNAPIMGAYEDFMREKTAETLIR 178

Query: 180 RRRSRILTRSLRFL 193
                 +   + F 
Sbjct: 179 SLIQSSILEGINFY 192


>gi|326564074|gb|EGE14316.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis 103P14B1]
 gi|326570555|gb|EGE20595.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis BC8]
 gi|326573198|gb|EGE23167.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis CO72]
          Length = 361

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 72/185 (38%), Gaps = 3/185 (1%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           +          +   L    +V++    +Y    +      +  W P E+ +  D   + 
Sbjct: 4   VFNPNPNDATQEPMFLGESVNVSRFDKQRYPIFEQLTEKQISFFWRPEEIDVSKDRRDF- 62

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
               L + E+ +   NL +    +S+   +  + +   +S PE   ++   AF E++H+ 
Sbjct: 63  --IELPEHEQHIFVSNLKYQTLLDSVQGRSPNVVLLPLVSVPELETWIETWAFFESIHAR 120

Query: 130 TFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRS 189
           ++ +II ++  +  E+ +     P I  +A    +Y   L S S  Y   ++      R 
Sbjct: 121 SYTHIIRNIFNNPSEILDDIVINPEIIKRAESISKYYDELHSLSLEYQQGKQVDMYELRK 180

Query: 190 LRFLC 194
             +LC
Sbjct: 181 RLYLC 185


>gi|326567429|gb|EGE17544.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis BC1]
          Length = 361

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 72/185 (38%), Gaps = 3/185 (1%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           +          +   L    +V++    +Y    +      +  W P E+ +  D   + 
Sbjct: 4   VFNPNPNDATQEPMFLGESVNVSRFDKQRYPIFEQLTEKQISFFWRPEEIDVSKDRRDF- 62

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
               L + E+ +   NL +    +S+   +  + +   +S PE   ++   AF E++H+ 
Sbjct: 63  --IELPEHEQHIFVSNLKYQTLLDSVQGRSPNVVLLPLVSVPELETWIETWAFFESIHAR 120

Query: 130 TFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRS 189
           ++ +II ++  +  E+ +     P I  +A    +Y   L S S  Y   ++      R 
Sbjct: 121 SYTHIIRNIFNNPSEILDDIVINPEIIKRAESISKYYDELHSLSLEYQQGKQVDMYELRK 180

Query: 190 LRFLC 194
             +LC
Sbjct: 181 RLYLC 185


>gi|166710317|ref|ZP_02241524.1| ribonucleotide-diphosphate reductase subunit beta [Xanthomonas
           oryzae pv. oryzicola BLS256]
          Length = 347

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 74/194 (38%), Gaps = 8/194 (4%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
            T L  I+  E R       ++N ++  +     + Y   +  Y     N W+P EV M+
Sbjct: 3   ATPLDRIKILEPRHPNRSTSIINGQTSGILNWNDIPYPSFYRAYKELSTNFWIPDEVDMK 62

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D   +   N L+  E+      +G  A+ +S     I   +  ++++P           
Sbjct: 63  GDARQY---NELSAREKNAYDSIIGLLATLDSPQTRFIY-NVAEYITDPAAHANAAIIGQ 118

Query: 123 EEAVHSHTFQYIITSLG--LDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNK 179
           +E +H+ ++ Y++ S+    D+  +F + R  P+I  +    +  Y   +   +     +
Sbjct: 119 QEVIHNESYSYVLASITGLADQNRVFEIARTHPTIIKRNAPIMGAYEDFMREKTAETLIR 178

Query: 180 RRRSRILTRSLRFL 193
                 +   + F 
Sbjct: 179 SLIQSSILEGINFY 192


>gi|190896536|gb|ACE96781.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896560|gb|ACE96793.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896566|gb|ACE96796.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 34/97 (35%), Gaps = 16/97 (16%)

Query: 101 VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITA 157
              + + +   E R +   Q   E + S  +  ++ +   D  E   LF+    VP +  
Sbjct: 1   AGRLMKEVQVSEARAFYGFQIAIENIRSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60

Query: 158 KANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           KA WAL++     S                R + F C
Sbjct: 61  KAQWALRWIDGSES-------------FAERLVAFAC 84


>gi|238895770|ref|YP_002920506.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella
           pneumoniae NTUH-K2044]
 gi|238548088|dbj|BAH64439.1| ribonucleotide-diphosphate reductase beta subunit [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 396

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 53  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 109

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 110 RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPATVFDDIVTNEQIQK 169

Query: 158 KANWALQYTQTL 169
           +A     Y  +L
Sbjct: 170 RAEGISHYYDSL 181


>gi|157325080|ref|YP_001468505.1| gp125 [Listeria phage A511]
 gi|66732769|gb|AAY53360.1| gp57 [Listeria phage P100]
 gi|66733088|gb|AAY52906.1| gp125 [Listeria phage A511]
          Length = 343

 Score =  101 bits (253), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 73/181 (40%), Gaps = 7/181 (3%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
             N     +    S +     ++Y   +  Y     N+W+P EV M+ D   +   N L+
Sbjct: 12  NPNKSTAIINGEASGIVNWNDIRYPSFYRAYKELTTNYWLPDEVDMKSDAKQY---NHLS 68

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           ++E+      +G  A+ +S     I   I  ++S+          A +EA+H+ ++ Y++
Sbjct: 69  EEEKYAFDSIIGLLATLDSPQTRFIY-NIAEYVSDASVHAITAIIAQQEAIHNESYSYVL 127

Query: 136 TSLG--LDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRF 192
            S+    ++  +F   R  P+I  +    ++ Y   +++ +     K      +   + F
Sbjct: 128 ASITNLQEQNRVFEEARTHPTIIKRNAPIMKSYDDFMNNKTPENMVKALVQSSILEGINF 187

Query: 193 L 193
            
Sbjct: 188 Y 188


>gi|255026984|ref|ZP_05298970.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes FSL J2-003]
          Length = 336

 Score =  101 bits (253), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 68/171 (39%), Gaps = 7/171 (4%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
              S +     + Y   +  Y     N+W+P EV M+ D   +     L++ E+      
Sbjct: 28  GETSGILNWNDIPYPSFYRAYKELSTNYWIPDEVDMKSDAKQY---PALSEQEKYAFDAI 84

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEG 143
           +G  A+ +S     I   I  ++++P         A +E +H+ ++ Y++ S+    ++ 
Sbjct: 85  IGLLATLDSPQTRFIY-NIAEYITDPAVHANAAIIAQQEVIHNESYSYVLASITNLQEQN 143

Query: 144 ELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            +F + R  P+I  +    +  Y   +++ +     K      +   + F 
Sbjct: 144 RVFELARTHPTIIKRNEPIMDAYDDFMNNKTGETLVKALIQSSILEGINFY 194


>gi|308067265|ref|YP_003868870.1| Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide
           reductase small subunit) [Paenibacillus polymyxa E681]
 gi|305856544|gb|ADM68332.1| Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide
           reductase small subunit) [Paenibacillus polymyxa E681]
          Length = 343

 Score =  101 bits (253), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 74/179 (41%), Gaps = 7/179 (3%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           N   + +    S +     ++    ++ Y     NHW+P E+PM  D + +     L  +
Sbjct: 13  NRSTRIIEGENSGILNWNDIRMPHMYKLYKVLLLNHWIPDEIPMSKDASQF---PVLDAE 69

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+   K N+G  A  +S+     V  + R+ ++            +E VH+ ++ Y+++S
Sbjct: 70  EQRTFKINIGLLAVLDSMQTM-FVGDVKRYFTDSSLEAISAIIGQQEVVHNQSYSYVLSS 128

Query: 138 LGLD--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           L  D  + E+F  ++  P +  +  +    Y +     +   + +   + ++   + F 
Sbjct: 129 LVSDQEQKEIFEYWKNDPVLLERNTFISDIYQEFRDEQNPQTFFQAMVADLILEGIFFY 187


>gi|289435502|ref|YP_003465374.1| ribonucleoside-diphosphate reductase beta chain [Listeria seeligeri
           serovar 1/2b str. SLCC3954]
 gi|289171746|emb|CBH28292.1| ribonucleoside-diphosphate reductase beta chain [Listeria seeligeri
           serovar 1/2b str. SLCC3954]
 gi|313632343|gb|EFR99385.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           seeligeri FSL N1-067]
 gi|313636848|gb|EFS02469.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           seeligeri FSL S4-171]
          Length = 349

 Score =  101 bits (253), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 68/171 (39%), Gaps = 7/171 (4%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
              S +     + Y   +  Y     N+W+P EV M+ D   +     L++ E+      
Sbjct: 28  GETSGILNWNDIPYPSFYRAYKELSTNYWIPDEVDMKSDAKQY---PALSEQEKYAFDAI 84

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEG 143
           +G  A+ +S     I   I  ++++P         A +E +H+ ++ Y++ S+    ++ 
Sbjct: 85  IGLLATLDSPQTRFIY-NIAEYITDPAVHANAAIIAQQEVIHNESYSYVLASITNLQEQK 143

Query: 144 ELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            +F + R  P+I  +    +  Y   +++ +     K      +   + F 
Sbjct: 144 RVFELARTHPTIIKRNEPIMDAYDDFMNNKTGETLVKALIQSSILEGINFY 194


>gi|46908387|ref|YP_014776.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes str. 4b F2365]
 gi|47091823|ref|ZP_00229618.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes str. 4b H7858]
 gi|226224761|ref|YP_002758868.1| ribonucleoside-diphosphate reductase, subunit beta [Listeria
           monocytogenes Clip81459]
 gi|254825283|ref|ZP_05230284.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL J1-194]
 gi|254853280|ref|ZP_05242628.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL R2-503]
 gi|254931734|ref|ZP_05265093.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes HPB2262]
 gi|255519998|ref|ZP_05387235.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes FSL J1-175]
 gi|300764038|ref|ZP_07074034.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes FSL N1-017]
 gi|46881658|gb|AAT04953.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|47019834|gb|EAL10572.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes str. 4b H7858]
 gi|225877223|emb|CAS05937.1| Putative ribonucleoside-diphosphate reductase, subunit beta
           [Listeria monocytogenes serotype 4b str. CLIP 80459]
 gi|258606640|gb|EEW19248.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL R2-503]
 gi|293583289|gb|EFF95321.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes HPB2262]
 gi|293594529|gb|EFG02290.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL J1-194]
 gi|300515379|gb|EFK42430.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes FSL N1-017]
 gi|313617790|gb|EFR90013.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           innocua FSL S4-378]
 gi|328465961|gb|EGF37142.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 1816]
 gi|328472177|gb|EGF43048.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 220]
          Length = 349

 Score =  101 bits (253), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 68/171 (39%), Gaps = 7/171 (4%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
              S +     + Y   +  Y     N+W+P EV M+ D   +     L++ E+      
Sbjct: 28  GETSGILNWNDIPYPSFYRAYKELSTNYWIPDEVDMKSDAKQY---PALSEQEKYAFDAI 84

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEG 143
           +G  A+ +S     I   I  ++++P         A +E +H+ ++ Y++ S+    ++ 
Sbjct: 85  IGLLATLDSPQTRFIY-NIAEYITDPAVHANAAIIAQQEVIHNESYSYVLASITNLQEQN 143

Query: 144 ELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            +F + R  P+I  +    +  Y   +++ +     K      +   + F 
Sbjct: 144 RVFELARTHPTIIKRNEPIMDAYDDFMNNKTGETLVKALIQSSILEGINFY 194


>gi|311278798|ref|YP_003941029.1| Ribonucleoside-diphosphate reductase [Enterobacter cloacae SCF1]
 gi|308747993|gb|ADO47745.1| Ribonucleoside-diphosphate reductase [Enterobacter cloacae SCF1]
          Length = 376

 Score =  101 bits (253), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 33  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPATVFDDIVTNEQIQK 149

Query: 158 KANWALQYTQTL 169
           +A    QY  TL
Sbjct: 150 RAEGISQYYDTL 161


>gi|315644971|ref|ZP_07898099.1| Ribonucleoside-diphosphate reductase [Paenibacillus vortex V453]
 gi|315279682|gb|EFU42984.1| Ribonucleoside-diphosphate reductase [Paenibacillus vortex V453]
          Length = 343

 Score =  101 bits (252), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 72/179 (40%), Gaps = 7/179 (3%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           N   + +    S +     ++    ++ Y     NHW+  E+PM  D   +     L  +
Sbjct: 13  NRSTRVIEGECSGILNWNDIRMPHMYKLYKVLLLNHWIADEIPMSKDAQQF---PTLDSE 69

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+   K N+   A  +S+     V  + R+ ++            +E VH+ ++ Y+++S
Sbjct: 70  EQRTFKINISLLAVLDSMQTM-FVSDVKRYFTDSSLEAISAIIGQQEVVHNQSYSYVLSS 128

Query: 138 LGLD--EGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           +  D  + E+F  ++  P +  +  +    Y     +PS   + +   + ++   + F 
Sbjct: 129 IVSDQEQKEIFEYWKHDPVLLERNQFISDIYQNFRDNPSPQTFFEAMVADLILEGIFFY 187


>gi|149911236|ref|ZP_01899859.1| ribonucleotide-diphosphate reductase beta subunit [Moritella sp.
           PE36]
 gi|149805690|gb|EDM65689.1| ribonucleotide-diphosphate reductase beta subunit [Moritella sp.
           PE36]
          Length = 376

 Score =  101 bits (252), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 62/160 (38%), Gaps = 3/160 (1%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
                + +        +V +    KY    +      +  W P EV +  D   ++    
Sbjct: 9   TPNDQLKEPMFFGQHVNVARFDQQKYEIFEKLIERQLSFFWRPEEVDVSKDRIDYQQ--- 65

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           L D E+ +   NL +    +S+   +  +A    +S PE   ++   +F E +HS ++ +
Sbjct: 66  LPDHEKHIFISNLKYQTLLDSIQGRSPNVAFLPLVSLPELETWIETWSFSETIHSRSYTH 125

Query: 134 IITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
           II ++  D  E+F+       I  +A     Y   L + +
Sbjct: 126 IIRNIINDPSEVFDDIVANEEILKRAKDIAGYYDDLINAT 165


>gi|16804193|ref|NP_465678.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes EGD-e]
 gi|116873587|ref|YP_850368.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           welshimeri serovar 6b str. SLCC5334]
 gi|217963685|ref|YP_002349363.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes HCC23]
 gi|224500181|ref|ZP_03668530.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes Finland 1988]
 gi|224501047|ref|ZP_03669354.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes FSL R2-561]
 gi|254826956|ref|ZP_05231643.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL N3-165]
 gi|254831409|ref|ZP_05236064.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 10403S]
 gi|255028522|ref|ZP_05300473.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes LO28]
 gi|284802601|ref|YP_003414466.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 08-5578]
 gi|284995743|ref|YP_003417511.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 08-5923]
 gi|290893101|ref|ZP_06556089.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL J2-071]
 gi|16411624|emb|CAD00232.1| lmo2154 [Listeria monocytogenes EGD-e]
 gi|116742465|emb|CAK21589.1| ribonucleoside-diphosphate reductase beta chain [Listeria
           welshimeri serovar 6b str. SLCC5334]
 gi|217332955|gb|ACK38749.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes HCC23]
 gi|258599337|gb|EEW12662.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL N3-165]
 gi|284058163|gb|ADB69104.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 08-5578]
 gi|284061210|gb|ADB72149.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes 08-5923]
 gi|290557263|gb|EFD90789.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes FSL J2-071]
 gi|307571740|emb|CAR84919.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes L99]
          Length = 349

 Score =  101 bits (252), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 68/171 (39%), Gaps = 7/171 (4%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
              S +     + Y   +  Y     N+W+P EV M+ D   +     L++ E+      
Sbjct: 28  GETSGILNWNDIPYPSFYRAYKELSTNYWIPDEVDMKSDAKQY---PALSEQEKYAFDAI 84

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEG 143
           +G  A+ +S     I   I  ++++P         A +E +H+ ++ Y++ S+    ++ 
Sbjct: 85  IGLLATLDSPQTRFIY-NIAEYITDPAVHANAAIIAQQEVIHNESYSYVLASITNLQEQN 143

Query: 144 ELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            +F + R  P+I  +    +  Y   +++ +     K      +   + F 
Sbjct: 144 RVFELARTHPTIIKRNEPIMDAYDDFMNNKTGETLVKALIQSSILEGINFY 194


>gi|315304277|ref|ZP_07874626.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           ivanovii FSL F6-596]
 gi|313627356|gb|EFR96140.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           ivanovii FSL F6-596]
          Length = 349

 Score =  101 bits (252), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 70/171 (40%), Gaps = 7/171 (4%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
              S +     + Y   +  Y     N+W+P EV M+ D   +     L++ E+      
Sbjct: 28  GETSGILNWNDIPYPSFYRAYKELSTNYWIPDEVDMKSDAKQY---PALSEQEKYAFDAI 84

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEG 143
           +G  A+ +S     I   I  ++++P         A +E +H+ ++ Y++ S+    ++ 
Sbjct: 85  IGLLATLDSPQTRFIY-NIAEYITDPAVHANAAIIAQQEVIHNESYSYVLASITNLQEQN 143

Query: 144 ELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            +F + R  P+I  +    ++ Y + +++ +     K      +   + F 
Sbjct: 144 RVFELARTHPTIIKRNEPIMEAYDEFMNNKTGETLVKALIQSSILEGINFY 194


>gi|16801322|ref|NP_471590.1| ribonucleotide-diphosphate reductase subunit beta [Listeria innocua
           Clip11262]
 gi|16414770|emb|CAC97486.1| lin2258 [Listeria innocua Clip11262]
          Length = 349

 Score =  101 bits (252), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 67/171 (39%), Gaps = 7/171 (4%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
              S +     + Y   +  Y     N+W+P EV M+ D   +     L++ E+      
Sbjct: 28  GETSGILNWNDIPYPSFYRAYKELSTNYWIPDEVDMKSDAKQY---PALSEQEKYAFDAI 84

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEG 143
           +G  A+ +S     I   I  ++++P         A +E +H+ ++ Y++ S+    ++ 
Sbjct: 85  IGLLATLDSPQTRFIY-NIAEYITDPAVHANAAIIAQQEVIHNESYSYVLASITNLQEQN 143

Query: 144 ELFNMYREVPSITAKAN-WALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            +F + R  P+I  +       Y   +++ +     K      +   + F 
Sbjct: 144 RVFELARTHPTIIKRNEPIMAAYDDFMNNKTGETLVKALIQSSILEGINFY 194


>gi|47095728|ref|ZP_00233334.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes str. 1/2a F6854]
 gi|254899145|ref|ZP_05259069.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes J0161]
 gi|254912714|ref|ZP_05262726.1| ribonucleoside-diphosphate reductase [Listeria monocytogenes J2818]
 gi|254937041|ref|ZP_05268738.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes F6900]
 gi|47015871|gb|EAL06798.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           monocytogenes str. 1/2a F6854]
 gi|258609644|gb|EEW22252.1| oxygen-dependent ribonucleotide-diphosphate reductase beta subunit
           NrdB [Listeria monocytogenes F6900]
 gi|293590709|gb|EFF99043.1| ribonucleoside-diphosphate reductase [Listeria monocytogenes J2818]
          Length = 349

 Score =  101 bits (252), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 68/171 (39%), Gaps = 7/171 (4%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
              S +     + Y   +  Y     N+W+P EV M+ D   +     L++ E+      
Sbjct: 28  GETSGILNWNDIPYPSFYRAYKELSTNYWIPDEVDMKSDAKQY---PTLSEQEKYAFDAI 84

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEG 143
           +G  A+ +S     I   I  ++++P         A +E +H+ ++ Y++ S+    ++ 
Sbjct: 85  IGLLATLDSPQTRFIY-NIAEYITDPAVHANAAIIAQQEVIHNESYSYVLASITNLQEQN 143

Query: 144 ELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            +F + R  P+I  +    +  Y   +++ +     K      +   + F 
Sbjct: 144 RVFELARTHPTIIKRNEPIMDAYDDFMNNKTGETLVKALIQSSILEGINFY 194


>gi|313622843|gb|EFR93161.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           innocua FSL J1-023]
          Length = 349

 Score =  101 bits (251), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 67/171 (39%), Gaps = 7/171 (4%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
              S +     + Y   +  Y     N+W+P EV M+ D   +     L++ E+      
Sbjct: 28  GETSGILNWNDIPYPSFYRAYKELSTNYWIPDEVDMKSDAKQY---PALSEQEKYAFDAI 84

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEG 143
           +G  A+ +S     I   I  ++++P         A +E +H+ ++ Y++ S+    ++ 
Sbjct: 85  IGLLATLDSPQTRFIY-NIAEYITDPAVHANAAIIAQQEVIHNESYSYVLASITNLQEQN 143

Query: 144 ELFNMYREVPSITAKAN-WALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            +F + R  P+I  +       Y   +++ +     K      +   + F 
Sbjct: 144 RVFELARTHPTIIKRNEPIMTAYDDFMNNKTGETLVKALIQSSILEGINFY 194


>gi|190896508|gb|ACE96767.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896514|gb|ACE96770.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896522|gb|ACE96774.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896540|gb|ACE96783.1| ribonucleotide reductase beta subunit [Populus tremula]
 gi|190896542|gb|ACE96784.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  101 bits (251), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 34/97 (35%), Gaps = 16/97 (16%)

Query: 101 VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITA 157
              + + +   E R +   Q   E + S  +  ++ +   D  E   LF+    VP +  
Sbjct: 1   AGRLMKEVQVSEARAFYGFQIAIENIRSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60

Query: 158 KANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           KA WAL++     S                R + F C
Sbjct: 61  KAQWALRWIDGSES-------------CAERLVAFAC 84


>gi|190896518|gb|ACE96772.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  101 bits (251), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 34/97 (35%), Gaps = 16/97 (16%)

Query: 101 VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITA 157
              + + +   E R +   Q   E + S  +  ++ +   D  E   LF+    VP +  
Sbjct: 1   AGRLMKEVQVSEARAFYGFQIAIENIRSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60

Query: 158 KANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           KA WAL++     S                R + F C
Sbjct: 61  KAQWALRWIDGSES-------------CAERLVAFAC 84


>gi|326783148|ref|YP_004323545.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-HM2]
 gi|310005566|gb|ADO99954.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-HM2]
          Length = 394

 Score =  101 bits (251), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 3/133 (2%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
            KY    +         W P EV +Q D + +K+   LT +++ +   NL +    +S+ 
Sbjct: 48  FKYPVFDKLTTQQLGYFWRPEEVSLQKDRSDYKT---LTPEQKHIYTSNLKYQIMLDSVQ 104

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSIT 156
                +A   + S PE    +      E +HS ++ YII ++  D  E+F+   + P I 
Sbjct: 105 GRGPGMAFMPYCSLPELESAMNVWQLMEMIHSRSYTYIIKNVYPDASEVFDTVLDDPKIM 164

Query: 157 AKANWALQYTQTL 169
           ++A    +    L
Sbjct: 165 SRAESVTKAYDDL 177


>gi|110806205|ref|YP_689725.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           flexneri 5 str. 8401]
 gi|110615753|gb|ABF04420.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella
           flexneri 5 str. 8401]
 gi|281601680|gb|ADA74664.1| putative ribonucleotide reductase, beta subunit [Shigella flexneri
           2002017]
          Length = 453

 Score =  101 bits (251), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 110 KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 166

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 167 RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 226

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 227 RAEGISSYYDEL 238


>gi|152971181|ref|YP_001336290.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|206577425|ref|YP_002237361.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella
           pneumoniae 342]
 gi|262043285|ref|ZP_06016416.1| ribonucleoside-diphosphate reductase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|288934289|ref|YP_003438348.1| ribonucleotide reductase [Klebsiella variicola At-22]
 gi|330000612|ref|ZP_08303755.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           MS 92-3]
 gi|150956030|gb|ABR78060.1| ribonucleotide-diphosphate reductase beta subunit [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|206566483|gb|ACI08259.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella
           pneumoniae 342]
 gi|259039384|gb|EEW40524.1| ribonucleoside-diphosphate reductase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|288889018|gb|ADC57336.1| ribonucleotide reductase [Klebsiella variicola At-22]
 gi|328537954|gb|EGF64133.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           MS 92-3]
          Length = 376

 Score =  100 bits (250), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 33  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPATVFDDIVTNEQIQK 149

Query: 158 KANWALQYTQTL 169
           +A     Y  +L
Sbjct: 150 RAEGISHYYDSL 161


>gi|331642864|ref|ZP_08343999.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H736]
 gi|331039662|gb|EGI11882.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H736]
          Length = 449

 Score =  100 bits (250), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 106 KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 162

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 163 RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 222

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 223 RAEGISSYYDEL 234


>gi|331653669|ref|ZP_08354670.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli M718]
 gi|331048518|gb|EGI20594.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli M718]
          Length = 449

 Score =  100 bits (250), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 106 KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 162

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 163 RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 222

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 223 RAEGISSYYDEL 234


>gi|190896546|gb|ACE96786.1| ribonucleotide reductase beta subunit [Populus tremula]
          Length = 223

 Score =  100 bits (250), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 34/97 (35%), Gaps = 16/97 (16%)

Query: 101 VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITA 157
              + + +   E R +   Q   E + S  +  ++ +   D  E   LF+    VP +  
Sbjct: 1   AGRLMKEVQVSEARAFYGFQIAIENIRSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60

Query: 158 KANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           KA WAL++     S                R + F C
Sbjct: 61  KAQWALRWMDGSES-------------CAERLVAFAC 84


>gi|282600304|ref|ZP_05973774.2| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rustigianii DSM 4541]
 gi|282565783|gb|EFB71318.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rustigianii DSM 4541]
          Length = 380

 Score =  100 bits (250), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 64/160 (40%), Gaps = 3/160 (1%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           I + +K   + +        +V +    KY    +      +  W P EV +  D   + 
Sbjct: 9   IFSQKKNDQLQEPMFFGQPVNVARFDQQKYPIFEKLIEKQLSFFWRPEEVDVSRDRIDY- 67

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
             N L D E+ +   NL +    +S+   +  +A    +S PE   ++   +F E +HS 
Sbjct: 68  --NALPDHEKHIFISNLKYQTLLDSIQGRSPNVAFLPLISIPELETWVETWSFSETIHSR 125

Query: 130 TFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           ++ +II ++  D   +F+   E   I  +A     Y   L
Sbjct: 126 SYTHIIRNIVNDPAIIFDDIVENEEILKRAKDISAYYDKL 165


>gi|209972895|ref|YP_002300342.1| gp4 [Bacillus phage SPO1]
 gi|209871215|gb|ACI90971.1| gp4 [Bacillus phage SPO1]
          Length = 346

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 80/192 (41%), Gaps = 9/192 (4%)

Query: 7   LSPIQAGEKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           L  I+    R       ++  + S +     ++Y   +  Y    +N W+P  + + +D+
Sbjct: 4   LKEIKLMTPRYPNRGTDIIGGKMSGIMNWNDIRYPQMYTIYKQIRSNFWIPQRISLVEDV 63

Query: 66  ALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEA 125
             + +    T +        +G  ++ +S+    +VL   R LS P  +      A +EA
Sbjct: 64  RQFPNLPKRTQE---AYLDVIGQLSTLDSIQTR-LVLEFGRFLSEPTYQPIAANIAQQEA 119

Query: 126 VHSHTFQYIITSLGLD---EGELFNMYREVPSITAKANWALQYTQ-TLSSPSFHYWNKRR 181
            H  ++ Y+++S+  D   + E+F+  +    +  + +   +Y Q  + +P+   + +  
Sbjct: 120 THEESYSYVLSSVVPDTNKQNEVFDKAKTNEDVLKRNDRVYKYYQEFVDNPTPQTFFRAL 179

Query: 182 RSRILTRSLRFL 193
            + ++   + F 
Sbjct: 180 VACVVLEGIYFY 191


>gi|329298015|ref|ZP_08255351.1| ribonucleotide-diphosphate reductase subunit beta [Plautia stali
           symbiont]
          Length = 376

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 64/155 (41%), Gaps = 3/155 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + +        +V +    KY    +      +  W P EV +  D   ++    L
Sbjct: 10  KNDQLKEPMFFGQSVNVARFDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---AL 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            + E+ +   NL +    +S+   +  +A+   +S PE   ++   AF E +HS ++ +I
Sbjct: 67  PEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHI 126

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           I ++  D  ++F+       I A+A    +Y   L
Sbjct: 127 IRNIVNDPSQVFDDIVTNEQILARAQDISKYYDDL 161


>gi|88801048|ref|ZP_01116596.1| ribonucleotide-diphosphate reductase beta subunit [Reinekea sp.
           MED297]
 gi|88776187|gb|EAR07414.1| ribonucleotide-diphosphate reductase beta subunit [Reinekea sp.
           MED297]
          Length = 369

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 56/132 (42%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           +Y    +      +  W P EV +Q D   +     L ++E+ +   NL +    +S+  
Sbjct: 33  RYPIFEQLIEKQLSFFWRPEEVDLQRDRKDF---IALPENEKHIFLSNLKYQTLLDSVQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A    +S PE   ++   AF E VHS ++ +II ++  +  ++F      P I  
Sbjct: 90  RSPNVAFLPIVSLPELETWIETWAFSETVHSRSYTHIIRNIVTEPDQIFEDIVTTPEIIE 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAESISGYYDQL 161


>gi|329922162|ref|ZP_08277907.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           sp. HGF5]
 gi|328942352|gb|EGG38619.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           sp. HGF5]
          Length = 370

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 72/179 (40%), Gaps = 7/179 (3%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           N   + +    S +     ++    ++ Y     NHW+  E+PM  D   +     L  +
Sbjct: 40  NRSTRVIEGECSGILNWNDIRMPHMYKLYKVLLLNHWIADEIPMSKDAQQF---PRLDPE 96

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+   K N+   A  +S+     V  + R+ ++            +E VH+ ++ Y+++S
Sbjct: 97  EQRTFKINISLLAVLDSMQTM-FVGDVKRYFTDSSLEAISAIIGQQEVVHNQSYSYVLSS 155

Query: 138 LGL--DEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           +    ++ E+F  ++  P +  +  +    Y     +PS   + +   + ++   + F 
Sbjct: 156 IVSEQEQKEIFEYWKHDPVLLERNQFISNIYQNFRDNPSPQSFFEAMVADLILEGIFFY 214


>gi|254523600|ref|ZP_05135655.1| ribonucleoside-diphosphate reductase, beta subunit
           [Stenotrophomonas sp. SKA14]
 gi|219721191|gb|EED39716.1| ribonucleoside-diphosphate reductase, beta subunit
           [Stenotrophomonas sp. SKA14]
          Length = 346

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 73/194 (37%), Gaps = 8/194 (4%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
            T L  I+  E R       ++N R+  +     + Y   +  Y     N W+P EV M+
Sbjct: 2   ATPLDRIKILEPRHPNRSTGIINGRTSGILNWNDIPYPSFYRAYKELSTNFWIPDEVDMK 61

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D   +     L+  E+      +G  A+ +S     I   +  ++++P           
Sbjct: 62  ADARQY---GELSGREKNAYDSIIGLLATLDSPQTRFIY-NVAEYITDPAAHANAAIIGQ 117

Query: 123 EEAVHSHTFQYIITSLG--LDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNK 179
           +E +H+ ++ Y++ S+    ++  +F + R  P+I  +    +  Y   +   +     K
Sbjct: 118 QEVIHNESYSYVLASITDLPNQNRVFELARTHPTIIKRNAPIMGAYDDFMREKTAETLLK 177

Query: 180 RRRSRILTRSLRFL 193
                 +   + F 
Sbjct: 178 SLIQSSILEGINFY 191


>gi|37526941|ref|NP_930285.1| ribonucleotide-diphosphate reductase subunit beta [Photorhabdus
           luminescens subsp. laumondii TTO1]
 gi|36786374|emb|CAE15427.1| ribonucleoside-diphosphate reductase 1 beta chain (ribonucleotide
           reductase 1) (B2 protein) (R2 protein) [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 376

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 57/139 (41%), Gaps = 3/139 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   +   N L D E+ +   NL +    +S+  
Sbjct: 33  KYPIFEKLIEKQLSFFWRPEEVDVSRDRIDY---NALPDHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A    +S PE   ++   +F E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVAFLPLISIPELETWVETWSFSETIHSRSYTHIIRNIVNDPAVVFDDIVTNEEILK 149

Query: 158 KANWALQYTQTLSSPSFHY 176
           +A     Y   L   + HY
Sbjct: 150 RAKDISAYYDDLIEMTNHY 168


>gi|326784253|ref|YP_004324793.1| ribonucleotide reductase A subunit [Synechococcus phage S-SSM5]
 gi|310003484|gb|ADO97880.1| ribonucleotide reductase A subunit [Synechococcus phage S-SSM5]
          Length = 388

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 65/147 (44%), Gaps = 4/147 (2%)

Query: 14  EKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
           + +VN   + M   +   V +    KY    +         W P EV +Q D + +++  
Sbjct: 18  KNKVNTKKQPMFFGQPLGVQRYDEYKYPVFDKLTQQQLGYFWRPEEVSLQKDRSDYQT-- 75

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
            L+ +++ +   NL +    +S+      +A   + S PE    +    F E +HS ++ 
Sbjct: 76  -LSPEQKHIFTSNLKYQIMLDSVQGRGPGMAFIPYCSLPELEACMTVWEFMEMIHSRSYT 134

Query: 133 YIITSLGLDEGELFNMYREVPSITAKA 159
           YII ++  D GE+F+   +  ++  +A
Sbjct: 135 YIIKNVYPDPGEVFDTILDDENVMERA 161


>gi|299822182|ref|ZP_07054068.1| ribonucleotide-diphosphate reductase subunit beta [Listeria grayi
           DSM 20601]
 gi|299815711|gb|EFI82949.1| ribonucleotide-diphosphate reductase subunit beta [Listeria grayi
           DSM 20601]
          Length = 349

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 67/168 (39%), Gaps = 7/168 (4%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
           S +     + Y   +  Y     N+W+P EV M+ D   +     L+++ER      +G 
Sbjct: 31  SGILNWNDIPYPSFYRAYKELSTNYWIPDEVDMKGDAKQY---PELSEEERYAYDAIIGL 87

Query: 89  FASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELF 146
            A+ +S     I   +  ++++P         A +E +H+ ++ Y++ S+    ++  +F
Sbjct: 88  LATLDSPQTRFIY-NVAEYVTDPAVHANAAIIAQQEVIHNESYSYVLASITNLQNQNRIF 146

Query: 147 NMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            + R  P+I  +    +  Y   L   +     K      +   + F 
Sbjct: 147 ELARTHPTIIKRNQPIMDAYDDFLEHKTGETLVKSLIQSSILEGINFY 194


>gi|170767354|ref|ZP_02901807.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           albertii TW07627]
 gi|170123688|gb|EDS92619.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           albertii TW07627]
          Length = 376

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 33  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 149

Query: 158 KANWALQYTQTL 169
           +A    +Y   L
Sbjct: 150 RAEGISRYYDEL 161


>gi|288549884|ref|ZP_06390831.1| ribonucleoside-diphosphate reductase, beta subunit [Enterobacter
           cancerogenus ATCC 35316]
 gi|288317051|gb|EFC55989.1| ribonucleoside-diphosphate reductase, beta subunit [Enterobacter
           cancerogenus ATCC 35316]
          Length = 420

 Score =   99 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 68/170 (40%), Gaps = 7/170 (4%)

Query: 4   NTGLSPI----QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEV 59
           +TGL+ +     +  K   + +        +V +    KY    +      +  W P EV
Sbjct: 39  STGLTAMAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEV 98

Query: 60  PMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLR 119
            +  D   ++    L + E+ +   NL +    +S+   +  +A+   +S PE   ++  
Sbjct: 99  DVSRDRIDFQ---ALPEHEKHIFLSNLKYQTLLDSIQGRSPNVALLPLISIPELETWVET 155

Query: 120 QAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
            AF E +HS ++ +II ++  D   +F+       I  +A     Y   L
Sbjct: 156 WAFSETIHSRSYTHIIRNIVNDPAVVFDDIVTNEQIQKRAEGIAHYYDEL 205


>gi|315283233|ref|ZP_07871471.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           marthii FSL S4-120]
 gi|313613124|gb|EFR87028.1| ribonucleoside-diphosphate reductase, beta subunit [Listeria
           marthii FSL S4-120]
          Length = 349

 Score =   99 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 69/171 (40%), Gaps = 7/171 (4%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
              S +     + Y   +  Y     N+W+P EV M+ D   +     L+++E+      
Sbjct: 28  GETSGILNWNDIPYPSFYRAYKELSTNYWIPDEVDMKSDAKQY---PNLSEEEKYAFDAI 84

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEG 143
           +G  A+ +S     I   I  ++++P           +E +H+ ++ Y++ S+    ++ 
Sbjct: 85  IGLLATLDSPQTRFIY-NIAEYITDPAVHANAAIIGQQEVIHNESYSYVLASITNLQEQN 143

Query: 144 ELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            +F + R  P+I  +    ++ Y   +++ +     K      +   + F 
Sbjct: 144 RVFELARTHPTIIKRNEPIMEAYDDFMNNKTGETLVKALIQSSILEGINFY 194


>gi|295098106|emb|CBK87196.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 420

 Score =   99 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 68/170 (40%), Gaps = 7/170 (4%)

Query: 4   NTGLSPI----QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEV 59
           +TGL+ +     +  K   + +        +V +    KY    +      +  W P EV
Sbjct: 39  STGLTAMAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEV 98

Query: 60  PMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLR 119
            +  D   ++    L + E+ +   NL +    +S+   +  +A+   +S PE   ++  
Sbjct: 99  DVSRDRIDFQ---ALPEHEKHIFLSNLKYQTLLDSIQGRSPNVALLPLISIPELETWVET 155

Query: 120 QAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
            AF E +HS ++ +II ++  D   +F+       I  +A     Y   L
Sbjct: 156 WAFSETIHSRSYTHIIRNIVNDPAVVFDDIVTNEQIQKRAEGIAHYYDEL 205


>gi|61806080|ref|YP_214440.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM2]
 gi|61374589|gb|AAX44586.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM2]
 gi|265525292|gb|ACY76089.1| NrdB [Prochlorococcus phage P-SSM2]
          Length = 384

 Score =   99 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 62/159 (38%), Gaps = 4/159 (2%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           MA   G++ +   E+               V +    KY              W P EV 
Sbjct: 1   MAEVKGMT-VFNTEEVNTKKQPMFFGKPLGVQRYDNFKYPSFENLTKQQLGYFWRPEEVS 59

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           +Q D   +++   L  +++ +   NL +    +S+      +A   + S PE    +   
Sbjct: 60  LQKDRGDYQT---LRPEQKHIYTSNLKYQIMLDSVQGRAPGMAFLPYCSLPELEACMEVW 116

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKA 159
           +F E +HS ++ Y+I ++  D  E+F+       I ++A
Sbjct: 117 SFMEMIHSRSYTYVIKNVYADPSEVFDKILSDDRILSRA 155


>gi|326782933|ref|YP_004323331.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-RSM4]
 gi|310004192|gb|ADO98586.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-RSM4]
          Length = 388

 Score =   99 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 78/178 (43%), Gaps = 9/178 (5%)

Query: 14  EKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
           + +VN   + M   +   V +    KY        S     W P EV +Q D + +++  
Sbjct: 18  KNKVNTKKQPMFFGQPLGVQRYDEYKYPVFDRLTQSQLGYFWRPEEVSLQKDRSDYQT-- 75

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
            LT +++ +   NL +    +S+      +A   + S PE    +    F E +HS ++ 
Sbjct: 76  -LTPEQKHIFTSNLKYQIMLDSVQGRGPGMAFIPYCSLPELEACMTVWEFMEMIHSRSYT 134

Query: 133 YIITSLGLDEGELFNMYREVPSITAKANWALQ-YTQTLSS----PSFHYWNKRRRSRI 185
           YII ++  D  E+F+   +  ++ ++A+   + Y + ++S     +   W+  R+  +
Sbjct: 135 YIIKNVYPDPSEVFDTILDDENVMSRASSVTKSYDEFINSAHEFDNCQTWDLARQGHL 192


>gi|253989035|ref|YP_003040391.1| ribonucleotide-diphosphate reductase subunit beta [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|211638141|emb|CAR66767.1| ribonucleoside-diphosphate reductase 1 beta chain (ribonucleotid
           reductase 1) (b2 protein) (r2 protein) [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253780485|emb|CAQ83647.1| ribonucleoside-diphosphate reductase 1 beta chain (ribonucleotid
           reductase 1) (b2 protein) (r2 protein) [Photorhabdus
           asymbiotica]
          Length = 376

 Score =   99 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 60/155 (38%), Gaps = 3/155 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + +        +V +    KY    +      +  W P EV +  D   +   N L
Sbjct: 10  KNDQLQEPMFFGQPVNVARFDQQKYPIFEKLIEKQLSFFWRPEEVDVSRDRIDY---NAL 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            D E+ +   NL +    +S+   +  +A    +S PE   ++   +F E +HS ++ +I
Sbjct: 67  PDHEKHIFISNLKYQTLLDSIQGRSPNVAFLPLISIPELETWVETWSFSETIHSRSYTHI 126

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           I ++  D   +F+       I  +A     Y   L
Sbjct: 127 IRNIVNDPAVVFDDIVTNEEILKRAKDISAYYDDL 161


>gi|261404531|ref|YP_003240772.1| Ribonucleoside-diphosphate reductase [Paenibacillus sp. Y412MC10]
 gi|261280994|gb|ACX62965.1| Ribonucleoside-diphosphate reductase [Paenibacillus sp. Y412MC10]
          Length = 343

 Score =   99 bits (248), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 72/179 (40%), Gaps = 7/179 (3%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           N   + +    S +     ++    ++ Y     NHW+  E+PM  D   +     L  +
Sbjct: 13  NRSTRVIEGECSGILNWNDIRMPHMYKLYKVLLLNHWIADEIPMSKDAQQF---PRLDPE 69

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+   K N+   A  +S+     V  + R+ ++            +E VH+ ++ Y+++S
Sbjct: 70  EQRTFKINISLLAVLDSMQTM-FVSDVKRYFTDSSLEAISAIIGQQEVVHNQSYSYVLSS 128

Query: 138 LGL--DEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           +    ++ E+F  ++  P +  +  +    Y     +PS   + +   + ++   + F 
Sbjct: 129 IVSEQEQKEIFEYWKHDPVLLERNQFISNIYQNFRDNPSPQSFFEAMVADLILEGIFFY 187


>gi|145633337|ref|ZP_01789068.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           influenzae 3655]
 gi|144986183|gb|EDJ92773.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           influenzae 3655]
          Length = 376

 Score = 99.5 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 61/163 (37%), Gaps = 3/163 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + +        +V +    KY    +      +  W P EV +  D   +     L
Sbjct: 10  KNDQLKEPMFFGQNVNVARYDQQKYETFEKLIEKQLSFFWRPEEVDVSQDRIDYA---AL 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            + E+ +   NL +    +S+   +  +A+   +S PE   ++    F E +HS ++ +I
Sbjct: 67  PEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPELETWIETWTFSETIHSRSYTHI 126

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYW 177
           I ++  D   +F+       I  +A     Y   L   S  Y 
Sbjct: 127 IRNIVNDPSIVFDDIVTNEEIIKRAQDISSYYDDLIRDSQLYG 169


>gi|61806369|ref|YP_214728.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM4]
 gi|61563913|gb|AAX46968.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM4]
          Length = 387

 Score = 99.5 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 3/139 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +         W P EV +Q D   ++    LT +++ +   NL +    +S+  
Sbjct: 42  KYPVFDKLTQQQLGYFWRPEEVSLQKDRGDYQQ---LTPEQKHIFTSNLKYQIMLDSVQG 98

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
               +A   + S PE    +    F E +HS ++ YII ++  D  E+F+   +  +I  
Sbjct: 99  RAPGMAFAPYCSLPELEGCINVWQFMEMIHSRSYTYIIKNVYSDPSEVFDTIIKDTNILQ 158

Query: 158 KANWALQYTQTLSSPSFHY 176
           +A    +      + +  Y
Sbjct: 159 RAESVTKSYDDFVNDAHEY 177


>gi|16273547|ref|NP_439802.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae Rd KW20]
 gi|68250262|ref|YP_249374.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 86-028NP]
 gi|145629252|ref|ZP_01785051.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 22.1-21]
 gi|145631490|ref|ZP_01787259.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae R3021]
 gi|145639184|ref|ZP_01794791.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae PittII]
 gi|145641092|ref|ZP_01796673.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae R3021]
 gi|260581255|ref|ZP_05849073.1| ribonucleoside-diphosphate reductase, beta subunit [Haemophilus
           influenzae RdAW]
 gi|260582634|ref|ZP_05850423.1| ribonucleoside-diphosphate reductase, beta subunit [Haemophilus
           influenzae NT127]
 gi|319776092|ref|YP_004138580.1| ribonucleoside-diphosphate reductase subunit beta [Haemophilus
           influenzae F3047]
 gi|319896901|ref|YP_004135096.1| ribonucleoside-diphosphate reductase beta chain [Haemophilus
           influenzae F3031]
 gi|329123256|ref|ZP_08251824.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           aegyptius ATCC 11116]
 gi|1172943|sp|P43755|RIR2_HAEIN RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|1574510|gb|AAC23306.1| ribonucleoside diphosphate reductase, beta chain (nrdB)
           [Haemophilus influenzae Rd KW20]
 gi|68058461|gb|AAX88714.1| ribonucleoside-diphosphate reductase beta chain [Haemophilus
           influenzae 86-028NP]
 gi|144978755|gb|EDJ88478.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 22.1-21]
 gi|144982920|gb|EDJ90433.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae R3021]
 gi|145271746|gb|EDK11656.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae PittII]
 gi|145274253|gb|EDK14118.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 22.4-21]
 gi|260092082|gb|EEW76027.1| ribonucleoside-diphosphate reductase, beta subunit [Haemophilus
           influenzae RdAW]
 gi|260094306|gb|EEW78205.1| ribonucleoside-diphosphate reductase, beta subunit [Haemophilus
           influenzae NT127]
 gi|301170418|emb|CBW30024.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Haemophilus influenzae 10810]
 gi|309750762|gb|ADO80746.1| Ribonucleoside diphosphate reductase 1, beta subunit [Haemophilus
           influenzae R2866]
 gi|309972945|gb|ADO96146.1| Ribonucleoside diphosphate reductase 1, beta subunit [Haemophilus
           influenzae R2846]
 gi|317432405|emb|CBY80760.1| ribonucleoside-diphosphate reductase beta chain [Haemophilus
           influenzae F3031]
 gi|317450683|emb|CBY86903.1| ribonucleoside-diphosphate reductase beta chain [Haemophilus
           influenzae F3047]
 gi|327471465|gb|EGF16913.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           aegyptius ATCC 11116]
          Length = 376

 Score = 99.5 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 61/163 (37%), Gaps = 3/163 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + +        +V +    KY    +      +  W P EV +  D   +     L
Sbjct: 10  KNDQLKEPMFFGQNVNVARYDQQKYETFEKLIEKQLSFFWRPEEVDVSQDRIDYA---AL 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            + E+ +   NL +    +S+   +  +A+   +S PE   ++    F E +HS ++ +I
Sbjct: 67  PEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPELETWIETWTFSETIHSRSYTHI 126

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYW 177
           I ++  D   +F+       I  +A     Y   L   S  Y 
Sbjct: 127 IRNIVNDPSIVFDDIVTNEEIIKRAQDISSYYDDLIRDSQLYG 169


>gi|326796346|ref|YP_004314166.1| ribonucleoside-diphosphate reductase [Marinomonas mediterranea
           MMB-1]
 gi|326547110|gb|ADZ92330.1| Ribonucleoside-diphosphate reductase [Marinomonas mediterranea
           MMB-1]
          Length = 377

 Score = 99.5 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 64/152 (42%), Gaps = 3/152 (1%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           ++ +   L    +V +    K+    +      +  W P EV +  D   +     L + 
Sbjct: 13  SLKEPMFLGENVNVARYDQQKHPIFEKLIEKQLSFFWRPEEVDLSSDRKDF---LNLAEH 69

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+ +   NL +    +S+   +  +A+   +S PE   ++   +F E +HS ++ +II +
Sbjct: 70  EQHIFLSNLKYQTLLDSVQGRSPNVALLPIVSLPELETWIETWSFSETIHSRSYTHIIRN 129

Query: 138 LGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           +  D   +F+       IT +A+   +Y   L
Sbjct: 130 IVNDPTVIFDDIIVNEEITKRADSVSRYYDDL 161


>gi|285016983|ref|YP_003374694.1| ribonucleotide-diphosphate reductase beta subunit protein
           [Xanthomonas albilineans GPE PC73]
 gi|283472201|emb|CBA14708.1| probable ribonucleotide-diphosphate reductase beta subunit protein
           [Xanthomonas albilineans]
          Length = 346

 Score = 99.5 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 68/174 (39%), Gaps = 8/174 (4%)

Query: 24  MLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMI 82
           ++N  +  +     + Y   +  Y     N W+P EV M+ D   +     L+  E+   
Sbjct: 22  IINGTTSGILNWNDIPYPSFYRAYKELSTNFWIPDEVDMKGDAKQY---GELSAREKNAY 78

Query: 83  KRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GL 140
              +G  A+ +S     I   +  ++++P           +E +H+ ++ Y++ S+    
Sbjct: 79  DSIIGLLATLDSPQTRFIY-NVAEYITDPAAHANAAIIGQQEVIHNESYSYVLASIAGLA 137

Query: 141 DEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           D+  +F + R  P+I A+    +Q Y   +   +     +      +   + F 
Sbjct: 138 DQNRVFEIARTHPTIVARNQPIMQAYDDFMREKTAETLLRSLIQSSILEGINFY 191


>gi|125554800|gb|EAZ00406.1| hypothetical protein OsI_22421 [Oryza sativa Indica Group]
          Length = 244

 Score = 99.5 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 34/93 (36%), Gaps = 16/93 (17%)

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANW 161
              +   E R +   Q   E +HS  +  ++ +   D  E   LF     VP++  KA+W
Sbjct: 1   MSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIRDGAEKDRLFRAIDTVPAVRRKADW 60

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           A+++                  R   R + F C
Sbjct: 61  AMRWIDGGE-------------RFAERLVAFAC 80


>gi|324020907|gb|EGB90126.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 117-3]
          Length = 420

 Score = 99.5 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 77  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 133

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 134 RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 193

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 194 RAEGISSYYDEL 205


>gi|145634465|ref|ZP_01790175.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           influenzae PittAA]
 gi|229845068|ref|ZP_04465204.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 6P18H1]
 gi|229846892|ref|ZP_04466999.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 7P49H1]
 gi|145268445|gb|EDK08439.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           influenzae PittAA]
 gi|229810381|gb|EEP46100.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 7P49H1]
 gi|229812040|gb|EEP47733.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae 6P18H1]
          Length = 376

 Score = 99.5 bits (247), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 61/163 (37%), Gaps = 3/163 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + +        +V +    KY    +      +  W P EV +  D   +     L
Sbjct: 10  KNDQLKEPMFFGQNVNVARYDQQKYETFEKLIEKQLSFFWRPEEVDVSQDRIDYA---AL 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            + E+ +   NL +    +S+   +  +A+   +S PE   ++    F E +HS ++ +I
Sbjct: 67  PEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPELETWIETWTFSETIHSRSYTHI 126

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYW 177
           I ++  D   +F+       I  +A     Y   L   S  Y 
Sbjct: 127 IRNIVNDPSIVFDDIVTNEEIIKRAQDISSYYDDLIRDSQLYG 169


>gi|48696741|ref|YP_024565.1| ORF20 [Ostreid herpesvirus 1]
 gi|81986458|sp|Q6R7K3|RIR2_OSHVF RecName: Full=Ribonucleoside-diphosphate reductase small chain
 gi|41352405|gb|AAS00912.1| ORF20 [Ostreid herpesvirus 1]
          Length = 579

 Score = 99.1 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 78/180 (43%), Gaps = 13/180 (7%)

Query: 20  DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER 79
           D  + +  + D   L P  Y    +      ++ W  TE+  + D+  W+    ++++ER
Sbjct: 60  DHHKDIVGKYDHALLKPAVYQQLRDFATKMESSSWQQTEIDAESDIPTWEQ---ISENER 116

Query: 80  LMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
             +++ L FFA  ++LV + I +        PEC+ ++  Q   E VH   +   + +L 
Sbjct: 117 DCVRKVLAFFAVGDTLVKDRIAI-FADEFPLPECKDFIDWQTVNEGVHQRVYNNYLDALV 175

Query: 140 LDE---GELFNMYR--EVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            D+    +L N Y+  E   I  K +W  +   ++ + S     +    ++ T ++ F  
Sbjct: 176 KDKIYLADLVNAYKDPEFAPIKKKVDWLGKII-SVENDS---RGEMVVGQVCTEAIMFAA 231


>gi|87120532|ref|ZP_01076426.1| ribonucleotide-diphosphate reductase beta subunit [Marinomonas sp.
           MED121]
 gi|86164175|gb|EAQ65446.1| ribonucleotide-diphosphate reductase beta subunit [Marinomonas sp.
           MED121]
          Length = 377

 Score = 99.1 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 66/159 (41%), Gaps = 3/159 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
              ++  ++ +        +V +    K+    +      +  W P EV +  D   ++ 
Sbjct: 6   FNRKRFDSMKEPMFFGENVNVARYDQQKHPIFEKLIEKQLSFFWRPEEVDLSSDRKDFQH 65

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              L   E+ +   NL +    +S+   +  +A+   +S PE   ++   +F E +HS +
Sbjct: 66  ---LEAHEQHIFLSNLKYQTLLDSVQGRSPNVALLPIVSIPELETWIETWSFSETIHSRS 122

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           + +II ++  + G +F+   E   IT +A    ++   L
Sbjct: 123 YTHIIRNIVNEPGVVFDDITENTEITKRAESVSKWYDDL 161


>gi|320175005|gb|EFW50120.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           dysenteriae CDC 74-1112]
          Length = 376

 Score = 99.1 bits (246), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 33  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFTSNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSIVFDDIVTNEQIQK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAEGISSYYDEL 161


>gi|332100965|gb|EGJ04311.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sp. D9]
          Length = 420

 Score = 99.1 bits (246), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 77  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 133

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 134 RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 193

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 194 RAEGISSYYDEL 205


>gi|117624429|ref|YP_853342.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           APEC O1]
 gi|237704711|ref|ZP_04535192.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
           3_2_53FAA]
 gi|115513553|gb|ABJ01628.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli
           APEC O1]
 gi|226901077|gb|EEH87336.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
           3_2_53FAA]
 gi|323952030|gb|EGB47904.1| ribonucleotide reductase [Escherichia coli H252]
 gi|323956004|gb|EGB51757.1| ribonucleotide reductase [Escherichia coli H263]
          Length = 420

 Score = 99.1 bits (246), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 77  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 133

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 134 RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 193

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 194 RAEGISSYYDEL 205


>gi|166367085|ref|YP_001659358.1| ribonucleoside-diphosphate reductase beta chain [Microcystis
           aeruginosa NIES-843]
 gi|166089458|dbj|BAG04166.1| ribonucleoside-diphosphate reductase beta chain [Microcystis
           aeruginosa NIES-843]
          Length = 283

 Score = 99.1 bits (246), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 55/128 (42%), Gaps = 4/128 (3%)

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
               LTD+ER      L +    +S+   NI   +   ++ PE    +  Q  +EA+H+ 
Sbjct: 3   EYGHLTDEERYAYDGILSYLTFLDSVQTCNIP-HLKGSVTAPEISLCMAEQISQEAMHNQ 61

Query: 130 TFQYIITSLGLDE--GELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRIL 186
           ++QY+I ++   E  GE+++ +R    +  +  +    Y Q +   +   +     +  L
Sbjct: 62  SYQYLIETIIPSERRGEVYDFWRTDKVLKDRCQFIASLYQQYIDKQTTESYFIALVADYL 121

Query: 187 TRSLRFLC 194
             SL F  
Sbjct: 122 LESLYFYN 129


>gi|317048919|ref|YP_004116567.1| ribonucleoside-diphosphate reductase [Pantoea sp. At-9b]
 gi|316950536|gb|ADU70011.1| Ribonucleoside-diphosphate reductase [Pantoea sp. At-9b]
          Length = 376

 Score = 99.1 bits (246), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 64/159 (40%), Gaps = 3/159 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
            +  K   + +        +V +    KY    +      +  W P EV +  D   ++ 
Sbjct: 6   FSQTKNDQLKEPMFFGQSVNVARFDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ- 64

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              L + E+ +   NL +    +S+   +  +A+   +S PE   ++   AF E +HS +
Sbjct: 65  --ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWIETWAFSETIHSRS 122

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           + +II ++  D   +F+       I A+A    +Y   L
Sbjct: 123 YTHIIRNIVNDPSLVFDDIVTNEQILARAQDISKYYDDL 161


>gi|253687496|ref|YP_003016686.1| ribonucleotide reductase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251754074|gb|ACT12150.1| ribonucleotide reductase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 376

 Score = 99.1 bits (246), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 62/155 (40%), Gaps = 3/155 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + +        +V +    KY    +      +  W P EV +  D   ++    L
Sbjct: 10  KNDQLLEPMFFGQSVNVARFDQQKYEIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---AL 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            D E+ +   NL +    +S+   +  +A+   +S PE   ++   AF E +HS ++ +I
Sbjct: 67  PDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHI 126

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           I ++  D   +F+       I  +A     Y  +L
Sbjct: 127 IRNIVNDPSLVFDDIVTNEEILKRAKDISGYYDSL 161


>gi|300723737|ref|YP_003713044.1| ribonucleoside-diphosphate reductase 1 subunit beta [Xenorhabdus
           nematophila ATCC 19061]
 gi|297630261|emb|CBJ90912.1| ribonucleoside-diphosphate reductase 1, beta subunit [Xenorhabdus
           nematophila ATCC 19061]
          Length = 376

 Score = 99.1 bits (246), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 61/155 (39%), Gaps = 3/155 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + +        +V +    KY    +      +  W P EV +  D   +   N L
Sbjct: 10  KNNQLQEPMFFGQSVNVARFDQQKYPIFEKLIEKQLSFFWRPEEVDVSRDRIDY---NSL 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            D E+ +   NL +    +S+   +  +A    +S PE   ++   +F E +HS ++ +I
Sbjct: 67  PDHEKHIFISNLKYQTLLDSIQGRSPNVAFLPLISIPELETWVETWSFSETIHSRSYTHI 126

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           I ++  D   +F+   E   I  +A     Y   L
Sbjct: 127 IRNIVNDPSIVFDDIVENEQILKRAKDISAYYDDL 161


>gi|294140834|ref|YP_003556812.1| ribonucleoside-diphosphate reductase subunit beta [Shewanella
           violacea DSS12]
 gi|293327303|dbj|BAJ02034.1| ribonucleoside-diphosphate reductase, beta subunit [Shewanella
           violacea DSS12]
          Length = 376

 Score = 99.1 bits (246), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   +     L D E+ +   NL +    +S+  
Sbjct: 33  KYEVFEKLIEKQLSFFWRPEEVDVSKDKIDYA---ALPDHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A    +S PE   ++   +F E +HS ++ +II ++  D   +F+   E   I  
Sbjct: 90  RSPNVAFLPLVSLPELETWIETWSFSETIHSRSYTHIIRNIVNDPSIIFDDIVENEEILK 149

Query: 158 KANWALQYTQTL 169
           +A    QY   L
Sbjct: 150 RATDIAQYYDDL 161


>gi|293395206|ref|ZP_06639492.1| ribonucleoside-diphosphate reductase [Serratia odorifera DSM 4582]
 gi|291422383|gb|EFE95626.1| ribonucleoside-diphosphate reductase [Serratia odorifera DSM 4582]
          Length = 376

 Score = 99.1 bits (246), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 61/155 (39%), Gaps = 3/155 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + +        +V +    K+    +      +  W P EV +  D   ++    L
Sbjct: 10  KNDQLLEPMFFGQSVNVARFDQQKHEIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---AL 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            D E+ +   NL +    +S+   +  +A+   +S PE   ++   +F E +HS ++ +I
Sbjct: 67  PDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWIETWSFSETIHSRSYTHI 126

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           I ++  D   +F+       I  +A     Y   L
Sbjct: 127 IRNIVNDPALVFDDIVTNEEIKKRAKDISGYYDDL 161


>gi|268591162|ref|ZP_06125383.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rettgeri DSM 1131]
 gi|291313388|gb|EFE53841.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rettgeri DSM 1131]
          Length = 378

 Score = 99.1 bits (246), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   +   N L D E+ +   NL +    +S+  
Sbjct: 35  KYPIFEKLIEKQLSFFWRPEEVDVSRDRIDY---NALPDHEKHIFISNLKYQTLLDSIQG 91

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+   E   I  
Sbjct: 92  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPAIIFDDIVENEEILK 151

Query: 158 KANWALQYTQTL 169
           +A     +   L
Sbjct: 152 RAKDISGFYDDL 163


>gi|304398198|ref|ZP_07380072.1| ribonucleotide reductase [Pantoea sp. aB]
 gi|304354064|gb|EFM18437.1| ribonucleotide reductase [Pantoea sp. aB]
          Length = 376

 Score = 98.8 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 63/155 (40%), Gaps = 3/155 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + +        +V +    KY    +      +  W P EV +  D   ++    L
Sbjct: 10  KNDQLKEPMFFGQSVNVARFDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---AL 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            D E+ +   NL +    +S+   +  +A+   +S PE   ++   AF E +HS ++ +I
Sbjct: 67  PDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWIETWAFSETIHSRSYTHI 126

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           I ++  D   +F+       I A+A    +Y   L
Sbjct: 127 IRNIVNDPAVVFDDIVTNEQILARAQDISRYYDDL 161


>gi|212712302|ref|ZP_03320430.1| hypothetical protein PROVALCAL_03388 [Providencia alcalifaciens DSM
           30120]
 gi|212685048|gb|EEB44576.1| hypothetical protein PROVALCAL_03388 [Providencia alcalifaciens DSM
           30120]
          Length = 380

 Score = 98.8 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 65/160 (40%), Gaps = 3/160 (1%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           I + +K   + +        +V +    KY    +      +  W P EV +  D   + 
Sbjct: 9   IFSQKKNNQLLEPMFFGQPVNVARFDQQKYPIFEKLIEKQLSFFWRPEEVDVARDRIDY- 67

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
             N L D E+ +   NL +    +S+   +  +A    +S PE   ++   +F E +HS 
Sbjct: 68  --NALPDHEKHIFISNLKYQTLLDSIQGRSPNVAFLPLISIPELETWVETWSFSETIHSR 125

Query: 130 TFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           ++ +II ++  D   +F+   E   I  +A     Y  TL
Sbjct: 126 SYTHIIRNIVNDPAIIFDDIVENEEILKRARDISAYYDTL 165


>gi|310639978|ref|YP_003944736.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           polymyxa SC2]
 gi|309244928|gb|ADO54495.1| Ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           polymyxa SC2]
          Length = 343

 Score = 98.8 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 74/179 (41%), Gaps = 7/179 (3%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           N   + +    S +     ++    ++ Y     NHW+P E+PM  D + +     L  +
Sbjct: 13  NRSTRIIEGENSGILNWNDIRMPHMYKLYKVLLLNHWIPDEIPMSKDASQF---PMLDAE 69

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+   K N+G  A  +S+     V  + R+ ++            +E VH+ ++ Y+++S
Sbjct: 70  EQRTFKINIGLLAVLDSMQTM-FVGDVKRYFTDSSLEAISAIIGQQEVVHNQSYSYVLSS 128

Query: 138 LGL--DEGELFNMYREVPSITAKANWA-LQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           L    ++ E+F  ++  P +  +  +    Y +     +   + +   + ++   + F 
Sbjct: 129 LVSEQEQKEIFEYWKNDPVLLERNTFISAIYQEFRDEQNPQTFFQAMVADLILEGIFFY 187


>gi|308187586|ref|YP_003931717.1| ribonucleoside-diphosphate reductase 1 beta chain [Pantoea vagans
           C9-1]
 gi|308058096|gb|ADO10268.1| ribonucleoside-diphosphate reductase 1 beta chain [Pantoea vagans
           C9-1]
          Length = 376

 Score = 98.8 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 63/155 (40%), Gaps = 3/155 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + +        +V +    KY    +      +  W P EV +  D   ++    L
Sbjct: 10  KNDQLKEPMFFGQSVNVARFDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---AL 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            D E+ +   NL +    +S+   +  +A+   +S PE   ++   AF E +HS ++ +I
Sbjct: 67  PDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWIETWAFSETIHSRSYTHI 126

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           I ++  D   +F+       I A+A    +Y   L
Sbjct: 127 IRNIVNDPAVVFDDIVTNEQILARAQDISRYYDDL 161


>gi|227114436|ref|ZP_03828092.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 376

 Score = 98.8 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 62/155 (40%), Gaps = 3/155 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + +        +V +    KY    +      +  W P EV +  D   ++    L
Sbjct: 10  KNDQLLEPMFFGQSVNVARFDQQKYEIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---AL 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            D E+ +   NL +    +S+   +  +A+   +S PE   ++   AF E +HS ++ +I
Sbjct: 67  PDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHI 126

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           I ++  D   +F+       I  +A     Y  +L
Sbjct: 127 IRNIVNDPSLVFDDIVTNEEILKRAKDISGYYDSL 161


>gi|157879968|pdb|1RNR|A Chain A, Autocatalytic Generation Of Dopa In The Engineered Protein
           R2 F208y From Escherichia Coli Ribonucleotide Reductase
           And Crystal Structure Of The Dopa-208 Protein
 gi|157879969|pdb|1RNR|B Chain B, Autocatalytic Generation Of Dopa In The Engineered Protein
           R2 F208y From Escherichia Coli Ribonucleotide Reductase
           And Crystal Structure Of The Dopa-208 Protein
          Length = 375

 Score = 98.8 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 32  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 89  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 148

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 149 RAEGISSYYDEL 160


>gi|189403970|ref|ZP_02786340.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4501]
 gi|217327202|ref|ZP_03443285.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. TW14588]
 gi|301026864|ref|ZP_07190263.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 196-1]
 gi|301647674|ref|ZP_07247468.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 146-1]
 gi|189368305|gb|EDU86721.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4501]
 gi|217319569|gb|EEC27994.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. TW14588]
 gi|260448673|gb|ACX39095.1| Ribonucleoside-diphosphate reductase [Escherichia coli DH1]
 gi|299879524|gb|EFI87735.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 196-1]
 gi|301074204|gb|EFK89010.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 146-1]
 gi|326339582|gb|EGD63393.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. 1125]
          Length = 393

 Score = 98.8 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 50  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 106

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 107 RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 166

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 167 RAEGISSYYDEL 178


>gi|261822457|ref|YP_003260563.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
           wasabiae WPP163]
 gi|261606470|gb|ACX88956.1| ribonucleotide reductase [Pectobacterium wasabiae WPP163]
          Length = 376

 Score = 98.8 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 62/155 (40%), Gaps = 3/155 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + +        +V +    KY    +      +  W P EV +  D   ++    L
Sbjct: 10  KNDQLLEPMFFGQSVNVARFDQQKYEIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---AL 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            D E+ +   NL +    +S+   +  +A+   +S PE   ++   AF E +HS ++ +I
Sbjct: 67  PDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHI 126

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           I ++  D   +F+       I  +A     Y  +L
Sbjct: 127 IRNIVNDPSLVFDDIVTNEEILKRAKDISGYYDSL 161


>gi|170019452|ref|YP_001724406.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           ATCC 8739]
 gi|187775748|ref|ZP_02798054.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4196]
 gi|188024880|ref|ZP_02774660.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4113]
 gi|189010171|ref|ZP_02805091.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4076]
 gi|189402101|ref|ZP_02779989.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4401]
 gi|189403050|ref|ZP_02792862.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4486]
 gi|189404930|ref|ZP_02812148.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC869]
 gi|189405663|ref|ZP_02823406.2| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC508]
 gi|208806716|ref|ZP_03249053.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4206]
 gi|208812585|ref|ZP_03253914.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4045]
 gi|208820390|ref|ZP_03260710.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4042]
 gi|209398142|ref|YP_002271641.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4115]
 gi|293415528|ref|ZP_06658171.1| ribonucleoside-diphosphate reductase [Escherichia coli B185]
 gi|300948933|ref|ZP_07162994.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 116-1]
 gi|300958921|ref|ZP_07171024.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 175-1]
 gi|307138893|ref|ZP_07498249.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           H736]
 gi|169754380|gb|ACA77079.1| Ribonucleoside-diphosphate reductase [Escherichia coli ATCC 8739]
 gi|187771218|gb|EDU35062.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4196]
 gi|188016038|gb|EDU54160.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4113]
 gi|189002108|gb|EDU71094.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4076]
 gi|189357709|gb|EDU76128.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4401]
 gi|189362845|gb|EDU81264.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4486]
 gi|189372811|gb|EDU91227.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC869]
 gi|189378868|gb|EDU97284.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC508]
 gi|208726517|gb|EDZ76118.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4206]
 gi|208733862|gb|EDZ82549.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4045]
 gi|208740513|gb|EDZ88195.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4042]
 gi|209159542|gb|ACI36975.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4115]
 gi|291433176|gb|EFF06155.1| ribonucleoside-diphosphate reductase [Escherichia coli B185]
 gi|300314424|gb|EFJ64208.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 175-1]
 gi|300451587|gb|EFK15207.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 116-1]
 gi|315136867|dbj|BAJ44026.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           DH1]
 gi|320192144|gb|EFW66789.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. EC1212]
 gi|320641061|gb|EFX10540.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. G5101]
 gi|320646450|gb|EFX15369.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H- str. 493-89]
 gi|320651547|gb|EFX19927.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H- str. H 2687]
 gi|320657299|gb|EFX25101.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O55:H7 str. 3256-97 TW 07815]
 gi|320667818|gb|EFX34726.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. LSU-61]
 gi|323936632|gb|EGB32918.1| ribonucleotide reductase [Escherichia coli E1520]
 gi|323941071|gb|EGB37258.1| ribonucleotide reductase [Escherichia coli E482]
 gi|326344044|gb|EGD67805.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. 1044]
          Length = 389

 Score = 98.8 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 46  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 102

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 103 RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 162

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 163 RAEGISSYYDEL 174


>gi|193062401|ref|ZP_03043496.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E22]
 gi|192932067|gb|EDV84666.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E22]
          Length = 393

 Score = 98.8 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 50  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 106

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 107 RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 166

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 167 RAEGISSYYDEL 178


>gi|194427189|ref|ZP_03059740.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli B171]
 gi|194436109|ref|ZP_03068211.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 101-1]
 gi|300918603|ref|ZP_07135191.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 115-1]
 gi|300931418|ref|ZP_07146747.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 187-1]
 gi|301303305|ref|ZP_07209430.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 124-1]
 gi|194414810|gb|EDX31081.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli B171]
 gi|194424837|gb|EDX40822.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 101-1]
 gi|300414255|gb|EFJ97565.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 115-1]
 gi|300460788|gb|EFK24281.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 187-1]
 gi|300841479|gb|EFK69239.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 124-1]
 gi|323961541|gb|EGB57149.1| ribonucleotide reductase [Escherichia coli H489]
 gi|323973062|gb|EGB68256.1| ribonucleotide reductase [Escherichia coli TA007]
          Length = 393

 Score = 98.8 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 50  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 106

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 107 RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 166

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 167 RAEGISSYYDEL 178


>gi|326782536|ref|YP_004323092.1| ribonucleotide reductase A subunit [Synechococcus phage S-SM1]
 gi|310002750|gb|ADO97149.1| ribonucleotide reductase A subunit [Synechococcus phage S-SM1]
          Length = 386

 Score = 98.8 bits (245), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 3/122 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +         W P EV +Q D + +++   L+D+++ +   NL +    +S+  
Sbjct: 41  KYPVFDKLTQQQLGYFWRPEEVSLQKDRSDYQT---LSDEQKHIFTSNLKYQIMLDSVQG 97

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
               +A   + S PE    +    F E VHS ++ YII ++  D  E+F+   +   + +
Sbjct: 98  RGPGMAFIPYCSLPELEACMTVWEFMEMVHSRSYTYIIKNVYSDPSEVFDTILDDEKVMS 157

Query: 158 KA 159
           +A
Sbjct: 158 RA 159


>gi|332093862|gb|EGI98916.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           boydii 5216-82]
          Length = 376

 Score = 98.8 bits (245), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 33  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAEGISSYYDEL 161


>gi|312967536|ref|ZP_07781751.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli 2362-75]
 gi|312287733|gb|EFR15638.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli 2362-75]
          Length = 359

 Score = 98.8 bits (245), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 16  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 72

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 73  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 132

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 133 RAEGISSYYDEL 144


>gi|494379|pdb|1MRR|A Chain A, Substitution Of Manganese For Iron In Ribonucleotide
           Reductase From Escherichia Coli. Spectroscopic And
           Crystallographic Characterization
 gi|494380|pdb|1MRR|B Chain B, Substitution Of Manganese For Iron In Ribonucleotide
           Reductase From Escherichia Coli. Spectroscopic And
           Crystallographic Characterization
 gi|494553|pdb|1RIB|A Chain A, Structure And Function Of The Escherichia Coli
           Ribonucleotide Reductase Protein R2
 gi|494554|pdb|1RIB|B Chain B, Structure And Function Of The Escherichia Coli
           Ribonucleotide Reductase Protein R2
          Length = 375

 Score = 98.8 bits (245), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 32  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 89  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 148

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 149 RAEGISSYYDEL 160


>gi|1942079|pdb|1XIK|A Chain A, Ribonucleoside-Diphosphate Reductase 1 Beta Chain
 gi|1942080|pdb|1XIK|B Chain B, Ribonucleoside-Diphosphate Reductase 1 Beta Chain
 gi|15825694|pdb|1JPR|A Chain A, Mn Substituted Ribonucleotide Reductase R2 From E. Coli
           Oxidized By Nitric Oxide
 gi|15825695|pdb|1JPR|B Chain B, Mn Substituted Ribonucleotide Reductase R2 From E. Coli
           Oxidized By Nitric Oxide
 gi|15826771|pdb|1JQC|A Chain A, Mn Substituted Ribonucleotide Reductase R2 From E. Coli
           Oxidized By Hydrogen Peroxide And Hydroxylamine
 gi|15826772|pdb|1JQC|B Chain B, Mn Substituted Ribonucleotide Reductase R2 From E. Coli
           Oxidized By Hydrogen Peroxide And Hydroxylamine
 gi|29726528|pdb|1MXR|A Chain A, High Resolution Structure Of Ribonucleotide Reductase R2
           From E. Coli In Its Oxidised (Met) Form
 gi|29726529|pdb|1MXR|B Chain B, High Resolution Structure Of Ribonucleotide Reductase R2
           From E. Coli In Its Oxidised (Met) Form
          Length = 375

 Score = 98.8 bits (245), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 32  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 89  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 148

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 149 RAEGISSYYDEL 160


>gi|193068232|ref|ZP_03049196.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E110019]
 gi|300903617|ref|ZP_07121535.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 84-1]
 gi|300926340|ref|ZP_07142140.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 182-1]
 gi|301328725|ref|ZP_07221778.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 78-1]
 gi|30041924|gb|AAP17650.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella
           flexneri 2a str. 2457T]
 gi|56383622|gb|AAN43832.2| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella
           flexneri 2a str. 301]
 gi|192958511|gb|EDV88950.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E110019]
 gi|300404353|gb|EFJ87891.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 84-1]
 gi|300417617|gb|EFK00928.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 182-1]
 gi|300844873|gb|EFK72633.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 78-1]
 gi|315255170|gb|EFU35138.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 85-1]
          Length = 389

 Score = 98.8 bits (245), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 46  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 102

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 103 RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 162

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 163 RAEGISSYYDEL 174


>gi|300936793|ref|ZP_07151685.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 21-1]
 gi|300458078|gb|EFK21571.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 21-1]
          Length = 405

 Score = 98.8 bits (245), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 62  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 118

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 119 RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 178

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 179 RAEGISSYYDEL 190


>gi|300897697|ref|ZP_07116095.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 198-1]
 gi|301022393|ref|ZP_07186277.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 69-1]
 gi|331683911|ref|ZP_08384507.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H299]
 gi|300358575|gb|EFJ74445.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 198-1]
 gi|300397543|gb|EFJ81081.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 69-1]
 gi|323967677|gb|EGB63089.1| ribonucleotide reductase [Escherichia coli M863]
 gi|331078863|gb|EGI50065.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H299]
          Length = 393

 Score = 98.8 bits (245), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 50  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 106

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 107 RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 166

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 167 RAEGISSYYDEL 178


>gi|283832326|ref|ZP_06352067.1| ribonucleoside-diphosphate reductase, beta subunit [Citrobacter
           youngae ATCC 29220]
 gi|291071973|gb|EFE10082.1| ribonucleoside-diphosphate reductase, beta subunit [Citrobacter
           youngae ATCC 29220]
          Length = 376

 Score = 98.8 bits (245), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 33  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPAVVFDDIVTNEQIQK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAEGISSYYDEL 161


>gi|291283479|ref|YP_003500297.1| Ribonucleoside-diphosphate reductase 1, beta subunit, B2
           [Escherichia coli O55:H7 str. CB9615]
 gi|290763352|gb|ADD57313.1| Ribonucleoside-diphosphate reductase 1, beta subunit, B2
           [Escherichia coli O55:H7 str. CB9615]
          Length = 389

 Score = 98.8 bits (245), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 46  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 102

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 103 RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIITNEQIQK 162

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 163 RAEGISSYYDEL 174


>gi|15802782|ref|NP_288809.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 EDL933]
 gi|15832372|ref|NP_311145.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. Sakai]
 gi|16130170|ref|NP_416738.1| ribonucleoside-diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli str. K-12 substr. MG1655]
 gi|82544520|ref|YP_408467.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii
           Sb227]
 gi|82777644|ref|YP_403993.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           dysenteriae Sd197]
 gi|89109052|ref|AP_002832.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli str. K-12 substr. W3110]
 gi|157161718|ref|YP_001459036.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           HS]
 gi|170081853|ref|YP_001731173.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli str. K-12 substr. DH10B]
 gi|187731010|ref|YP_001881065.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii
           CDC 3083-94]
 gi|188495860|ref|ZP_03003130.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 53638]
 gi|195935609|ref|ZP_03080991.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. EC4024]
 gi|218548311|ref|YP_002382102.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia
           fergusonii ATCC 35469]
 gi|218705765|ref|YP_002413284.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           UMN026]
 gi|238901409|ref|YP_002927205.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli BW2952]
 gi|254794126|ref|YP_003078963.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. TW14359]
 gi|256022083|ref|ZP_05435948.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
           4_1_40B]
 gi|261223312|ref|ZP_05937593.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261259138|ref|ZP_05951671.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. FRIK966]
 gi|293405702|ref|ZP_06649694.1| nrdB [Escherichia coli FVEC1412]
 gi|293410599|ref|ZP_06654175.1| ribonucleoside-diphosphate reductase [Escherichia coli B354]
 gi|298381383|ref|ZP_06990982.1| nrdB [Escherichia coli FVEC1302]
 gi|309785072|ref|ZP_07679705.1| ribonucleoside-diphosphate reductase 1, subunit beta [Shigella
           dysenteriae 1617]
 gi|312973510|ref|ZP_07787682.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli 1827-70]
 gi|57014104|sp|P69924|RIR2_ECOLI RecName: Full=Ribonucleoside-diphosphate reductase 1 subunit beta;
           AltName: Full=Protein B2; AltName: Full=Protein R2;
           AltName: Full=Ribonucleotide reductase 1
 gi|57014105|sp|P69925|RIR2_ECO57 RecName: Full=Ribonucleoside-diphosphate reductase 1 subunit beta;
           AltName: Full=Protein B2; AltName: Full=Protein R2;
           AltName: Full=Ribonucleotide reductase 1
 gi|12516573|gb|AAG57364.1|AE005456_1 ribonucleoside diphosphage reductase 1, beta subunit, B2
           [Escherichia coli O157:H7 str. EDL933]
 gi|146967|gb|AAA24224.1| ribonucleoside diphosphate reductase B2 subunit precursor
           [Escherichia coli]
 gi|1788567|gb|AAC75295.1| ribonucleoside-diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli str. K-12 substr. MG1655]
 gi|1799582|dbj|BAA16054.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli str. K12 substr. W3110]
 gi|13362587|dbj|BAB36541.1| ribonucleoside-diphosphate reductase 1 beta subunit [Escherichia
           coli O157:H7 str. Sakai]
 gi|81241792|gb|ABB62502.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella
           dysenteriae Sd197]
 gi|81245931|gb|ABB66639.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella
           boydii Sb227]
 gi|157067398|gb|ABV06653.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli HS]
 gi|169889688|gb|ACB03395.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli str. K-12 substr. DH10B]
 gi|187428002|gb|ACD07276.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella boydii
           CDC 3083-94]
 gi|188491059|gb|EDU66162.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 53638]
 gi|218355852|emb|CAQ88465.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia fergusonii ATCC 35469]
 gi|218432862|emb|CAR13756.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli UMN026]
 gi|238863475|gb|ACR65473.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli BW2952]
 gi|254593526|gb|ACT72887.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli O157:H7 str. TW14359]
 gi|284922226|emb|CBG35308.1| ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli
           042]
 gi|291427910|gb|EFF00937.1| nrdB [Escherichia coli FVEC1412]
 gi|291471067|gb|EFF13551.1| ribonucleoside-diphosphate reductase [Escherichia coli B354]
 gi|298278825|gb|EFI20339.1| nrdB [Escherichia coli FVEC1302]
 gi|308927442|gb|EFP72916.1| ribonucleoside-diphosphate reductase 1, subunit beta [Shigella
           dysenteriae 1617]
 gi|309702545|emb|CBJ01872.1| ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli
           ETEC H10407]
 gi|310332105|gb|EFP99340.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli 1827-70]
 gi|315615496|gb|EFU96128.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli 3431]
 gi|320184866|gb|EFW59654.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           flexneri CDC 796-83]
 gi|320663001|gb|EFX30318.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O55:H7 str. USDA 5905]
 gi|327252504|gb|EGE64163.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli STEC_7v]
 gi|332094036|gb|EGI99088.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           boydii 3594-74]
          Length = 376

 Score = 98.8 bits (245), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 33  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAEGISSYYDEL 161


>gi|170682190|ref|YP_001744431.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           SMS-3-5]
 gi|170519908|gb|ACB18086.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli SMS-3-5]
 gi|315285847|gb|EFU45287.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 110-3]
 gi|315298059|gb|EFU57328.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 16-3]
          Length = 393

 Score = 98.8 bits (245), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 50  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 106

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 107 RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 166

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 167 RAEGISSYYDEL 178


>gi|331663742|ref|ZP_08364652.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA143]
 gi|323977567|gb|EGB72653.1| ribonucleotide reductase [Escherichia coli TW10509]
 gi|331059541|gb|EGI31518.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA143]
          Length = 389

 Score = 98.8 bits (245), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 46  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 102

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 103 RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 162

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 163 RAEGISSYYDEL 174


>gi|42543283|pdb|1PIY|A Chain A, Ribonucleotide Reductase R2 Soaked With Ferrous Ion At
           Neutral Ph
 gi|42543284|pdb|1PIY|B Chain B, Ribonucleotide Reductase R2 Soaked With Ferrous Ion At
           Neutral Ph
 gi|42543506|pdb|1R65|A Chain A, Crystal Structure Of Ferrous Soaked Ribonucleotide
           Reductase R2 Subunit (Wildtype) At Ph 5 From E. Coli
 gi|42543507|pdb|1R65|B Chain B, Crystal Structure Of Ferrous Soaked Ribonucleotide
           Reductase R2 Subunit (Wildtype) At Ph 5 From E. Coli
          Length = 375

 Score = 98.8 bits (245), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 32  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 89  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 148

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 149 RAEGISSYYDEL 160


>gi|26248623|ref|NP_754663.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           CFT073]
 gi|74312755|ref|YP_311174.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sonnei
           Ss046]
 gi|91211528|ref|YP_541514.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           UTI89]
 gi|110642443|ref|YP_670173.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           536]
 gi|157157492|ref|YP_001463584.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           E24377A]
 gi|161485800|ref|NP_708125.3| ribonucleotide-diphosphate reductase subunit beta [Shigella
           flexneri 2a str. 301]
 gi|161486465|ref|NP_837840.2| ribonucleotide-diphosphate reductase subunit beta [Shigella
           flexneri 2a str. 2457T]
 gi|191166513|ref|ZP_03028343.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli B7A]
 gi|191170278|ref|ZP_03031832.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli F11]
 gi|194433322|ref|ZP_03065602.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella
           dysenteriae 1012]
 gi|209919687|ref|YP_002293771.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           SE11]
 gi|215487452|ref|YP_002329883.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O127:H6 str. E2348/69]
 gi|218554798|ref|YP_002387711.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           IAI1]
 gi|218559152|ref|YP_002392065.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           S88]
 gi|218695841|ref|YP_002403508.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           55989]
 gi|218700706|ref|YP_002408335.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           IAI39]
 gi|227887293|ref|ZP_04005098.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 83972]
 gi|253772842|ref|YP_003035673.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254162246|ref|YP_003045354.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           B str. REL606]
 gi|256017603|ref|ZP_05431468.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sp. D9]
 gi|260844831|ref|YP_003222609.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia
           coli O103:H2 str. 12009]
 gi|260856285|ref|YP_003230176.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia
           coli O26:H11 str. 11368]
 gi|260868965|ref|YP_003235367.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia
           coli O111:H- str. 11128]
 gi|293446578|ref|ZP_06663000.1| ribonucleoside-diphosphate reductase [Escherichia coli B088]
 gi|300818165|ref|ZP_07098377.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 107-1]
 gi|300822109|ref|ZP_07102251.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 119-7]
 gi|300981251|ref|ZP_07175428.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 200-1]
 gi|300983269|ref|ZP_07176508.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 45-1]
 gi|301048988|ref|ZP_07195975.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 185-1]
 gi|306814652|ref|ZP_07448814.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           NC101]
 gi|307311198|ref|ZP_07590842.1| ribonucleotide reductase [Escherichia coli W]
 gi|309793115|ref|ZP_07687543.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 145-7]
 gi|331647890|ref|ZP_08348982.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli M605]
 gi|331668939|ref|ZP_08369787.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA271]
 gi|331678186|ref|ZP_08378861.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H591]
 gi|26109028|gb|AAN81231.1|AE016763_190 Ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli
           CFT073]
 gi|73856232|gb|AAZ88939.1| ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Shigella
           sonnei Ss046]
 gi|91073102|gb|ABE07983.1| ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli
           UTI89]
 gi|110344035|gb|ABG70272.1| ribonucleoside-diphosphate reductase 1 beta chain [Escherichia coli
           536]
 gi|157079522|gb|ABV19230.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E24377A]
 gi|190903473|gb|EDV63192.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli B7A]
 gi|190909794|gb|EDV69379.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli F11]
 gi|194418416|gb|EDX34505.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella
           dysenteriae 1012]
 gi|209912946|dbj|BAG78020.1| ribonucleoside diphosphate reductase beta subunit [Escherichia coli
           SE11]
 gi|215265524|emb|CAS09927.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli O127:H6 str. E2348/69]
 gi|218352573|emb|CAU98352.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli 55989]
 gi|218361566|emb|CAQ99157.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli IAI1]
 gi|218365921|emb|CAR03663.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli S88]
 gi|218370692|emb|CAR18503.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli IAI39]
 gi|222033996|emb|CAP76737.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli LF82]
 gi|227835643|gb|EEJ46109.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 83972]
 gi|242377869|emb|CAQ32637.1| nrdB, subunit of B2 protein and GDP reductase [multifunctional]
           [Escherichia coli BL21(DE3)]
 gi|253323886|gb|ACT28488.1| ribonucleotide reductase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253974147|gb|ACT39818.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli
           B str. REL606]
 gi|253978314|gb|ACT43984.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli
           BL21(DE3)]
 gi|257754934|dbj|BAI26436.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia
           coli O26:H11 str. 11368]
 gi|257759978|dbj|BAI31475.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia
           coli O103:H2 str. 12009]
 gi|257765321|dbj|BAI36816.1| ribonucleoside diphosphate reductase 1, beta subunit [Escherichia
           coli O111:H- str. 11128]
 gi|281179326|dbj|BAI55656.1| ribonucleoside diphosphate reductase beta subunit [Escherichia coli
           SE15]
 gi|291323408|gb|EFE62836.1| ribonucleoside-diphosphate reductase [Escherichia coli B088]
 gi|294490302|gb|ADE89058.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli IHE3034]
 gi|300299180|gb|EFJ55565.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 185-1]
 gi|300307615|gb|EFJ62135.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 200-1]
 gi|300408603|gb|EFJ92141.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 45-1]
 gi|300525239|gb|EFK46308.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 119-7]
 gi|300529309|gb|EFK50371.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 107-1]
 gi|305852046|gb|EFM52498.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           NC101]
 gi|306908704|gb|EFN39201.1| ribonucleotide reductase [Escherichia coli W]
 gi|307554301|gb|ADN47076.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Escherichia coli ABU 83972]
 gi|308123401|gb|EFO60663.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 145-7]
 gi|312946856|gb|ADR27683.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O83:H1 str. NRG 857C]
 gi|313651060|gb|EFS15459.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           flexneri 2a str. 2457T]
 gi|315061535|gb|ADT75862.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli W]
 gi|315292180|gb|EFU51532.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 153-1]
 gi|320178793|gb|EFW53756.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii
           ATCC 9905]
 gi|320196104|gb|EFW70728.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           WV_060327]
 gi|320199830|gb|EFW74419.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           EC4100B]
 gi|323156512|gb|EFZ42666.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli EPECa14]
 gi|323161696|gb|EFZ47579.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli E128010]
 gi|323168602|gb|EFZ54282.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           sonnei 53G]
 gi|323171914|gb|EFZ57558.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli LT-68]
 gi|323176838|gb|EFZ62428.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli 1180]
 gi|323184146|gb|EFZ69523.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli 1357]
 gi|323188037|gb|EFZ73332.1| ribonucleoside-diphosphate reductase 1 subunit beta [Escherichia
           coli RN587/1]
 gi|323377884|gb|ADX50152.1| Ribonucleoside-diphosphate reductase [Escherichia coli KO11]
 gi|324006608|gb|EGB75827.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 57-2]
 gi|324013118|gb|EGB82337.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 60-1]
 gi|324117882|gb|EGC11781.1| ribonucleotide reductase [Escherichia coli E1167]
 gi|325496725|gb|EGC94584.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia
           fergusonii ECD227]
 gi|330912066|gb|EGH40576.1| ribonucleotide reductase of class 1a (aerobic), beta subunit
           [Escherichia coli AA86]
 gi|331043614|gb|EGI15752.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli M605]
 gi|331064133|gb|EGI36044.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA271]
 gi|331074646|gb|EGI45966.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H591]
 gi|332096162|gb|EGJ01165.1| ribonucleoside-diphosphate reductase 1 subunit beta [Shigella
           dysenteriae 155-74]
          Length = 376

 Score = 98.8 bits (245), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 33  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAEGISSYYDEL 161


>gi|331658316|ref|ZP_08359278.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA206]
 gi|307626227|gb|ADN70531.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           UM146]
 gi|331056564|gb|EGI28573.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA206]
          Length = 389

 Score = 98.8 bits (245), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 46  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 102

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 103 RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 162

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 163 RAEGISSYYDEL 174


>gi|227328222|ref|ZP_03832246.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 376

 Score = 98.8 bits (245), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 62/155 (40%), Gaps = 3/155 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + +        +V +    KY    +      +  W P EV +  D   ++    L
Sbjct: 10  KNDQLLEPMFFGQSVNVARFDQQKYEIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---AL 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            D E+ +   NL +    +S+   +  +A+   +S PE   ++   AF E +HS ++ +I
Sbjct: 67  PDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHI 126

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           I ++  D   +F+       I  +A     Y  +L
Sbjct: 127 IRNIVNDPSLVFDDIVTNDEILKRAKDISGYYDSL 161


>gi|218690398|ref|YP_002398610.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           ED1a]
 gi|218427962|emb|CAR08882.2| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Escherichia coli ED1a]
          Length = 376

 Score = 98.8 bits (245), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 33  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAEGISSYYDEL 161


>gi|297520407|ref|ZP_06938793.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           OP50]
          Length = 225

 Score = 98.4 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 50  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 106

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 107 RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 166

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 167 RAEGISSYYDEL 178


>gi|269863385|ref|XP_002651202.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|269865188|ref|XP_002651836.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063788|gb|EED42221.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220064957|gb|EED42855.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 111

 Score = 98.4 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L+       + P++Y   WE Y    +  W   EV M  D   +   + LT +E+  
Sbjct: 26  EPLLDEAKKRYVIFPIQYPEIWEFYKMHESTFWTVEEVDMTFDCEHF---STLTPNEQFF 82

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSN 110
           IK  L FFA+S+ +V  N+V      +  
Sbjct: 83  IKYVLAFFAASDGIVNENLVERFSSEVQI 111


>gi|46143780|ref|ZP_00134247.2| COG0208: Ribonucleotide reductase, beta subunit [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
          Length = 336

 Score = 98.4 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 61/159 (38%), Gaps = 3/159 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + +        +V +    KY    +      +  W P EV +  D   ++S   L
Sbjct: 10  KNDQLKEPMFFGQNVNVARYDQQKYELFEKLIEKQLSFFWRPEEVDVSQDRIDYQS---L 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            + E+ +   NL +    +S+   +  +A    +S PE   ++    F E +HS ++ +I
Sbjct: 67  PEHEKHIFISNLKYQTLLDSIQGRSPNVAFLPLVSIPELETWIETWTFSETIHSRSYTHI 126

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
           I ++  D   +F+       I  +A     Y   L   S
Sbjct: 127 IRNIVNDPSIVFDDIVTNEEIIKRAKDISCYYDDLIRDS 165


>gi|304414248|ref|ZP_07395616.1| ribonucleotide reductase beta subunit [Candidatus Regiella
           insecticola LSR1]
 gi|304283462|gb|EFL91858.1| ribonucleotide reductase beta subunit [Candidatus Regiella
           insecticola LSR1]
          Length = 381

 Score = 98.4 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 63/169 (37%), Gaps = 3/169 (1%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           M  +       +  K   + +        +V +    KY    +      +  W P E+ 
Sbjct: 1   MPEDIMAYSTFSQNKNDQLKEPMFFGQSVNVARFDQQKYAIFEKLIEQQLSFFWRPEEID 60

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           +  D   ++    L   E+ +   NL +    +S+   +  +A+   +S PE   ++   
Sbjct: 61  VSQDRTDYQK---LPPHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPELETWIETW 117

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           +F E +HS ++ +II ++  D   +F+       I  +A     Y   L
Sbjct: 118 SFSETIHSRSYTHIIRNIVNDPSLIFDDIVTNEEILKRAEDISAYYDDL 166


>gi|197285594|ref|YP_002151466.1| ribonucleotide-diphosphate reductase subunit beta [Proteus
           mirabilis HI4320]
 gi|194683081|emb|CAR43612.1| ribonucleoside-diphosphate reductase 1, beta subunit [Proteus
           mirabilis HI4320]
          Length = 376

 Score = 98.4 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 3/136 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   +   N L D E+ +   NL +    +S+  
Sbjct: 33  KYPIFEKLIEKQLSFFWRPEEVDVSRDRIDY---NALPDHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A    +S PE   ++   +F E +HS ++ +II ++  D   +F+   E   I  
Sbjct: 90  RSPNVAFLPLISIPELETWVETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEEILK 149

Query: 158 KANWALQYTQTLSSPS 173
           +A     Y   L + +
Sbjct: 150 RARDISSYYDELINLT 165


>gi|226327851|ref|ZP_03803369.1| hypothetical protein PROPEN_01732 [Proteus penneri ATCC 35198]
 gi|225203555|gb|EEG85909.1| hypothetical protein PROPEN_01732 [Proteus penneri ATCC 35198]
          Length = 376

 Score = 98.4 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 3/136 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   +   N L D E+ +   NL +    +S+  
Sbjct: 33  KYPIFEKLIEKQLSFFWRPEEVDVSRDRIDY---NALPDHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A    +S PE   ++   +F E +HS ++ +II ++  D   +F+   E   I  
Sbjct: 90  RSPNVAFLPLISIPELETWVETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEEILK 149

Query: 158 KANWALQYTQTLSSPS 173
           +A     Y   L + +
Sbjct: 150 RARDISSYYDELINLT 165


>gi|170726650|ref|YP_001760676.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           woodyi ATCC 51908]
 gi|169811997|gb|ACA86581.1| Ribonucleoside-diphosphate reductase [Shewanella woodyi ATCC 51908]
          Length = 376

 Score = 98.4 bits (244), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   +     L D E+ +   NL +    +S+  
Sbjct: 33  KYEVFEKLIEKQLSFFWRPEEVDVSKDKIDYA---ALPDHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A    +S PE   ++   +F E +HS ++ +II ++  D   +F+   E   I  
Sbjct: 90  RSPNVAFLPLVSLPELETWIETWSFSETIHSRSYTHIIRNIVNDPSIVFDDIVENEEILK 149

Query: 158 KANWALQYTQTL 169
           +A+   +Y  TL
Sbjct: 150 RASDIAEYYDTL 161


>gi|146312444|ref|YP_001177518.1| ribonucleotide-diphosphate reductase subunit beta [Enterobacter sp.
           638]
 gi|145319320|gb|ABP61467.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Enterobacter sp. 638]
          Length = 376

 Score = 98.4 bits (244), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L D E+ +   NL +    +S+  
Sbjct: 33  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDFQ---ALPDHEKHIFLSNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPAVVFDDIVTNEQIQK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAEGISHYYDEL 161


>gi|324112772|gb|EGC06748.1| ribonucleotide reductase [Escherichia fergusonii B253]
          Length = 389

 Score = 98.4 bits (244), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 46  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 102

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 103 RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 162

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 163 RAEGISAYYDEL 174


>gi|161502570|ref|YP_001569682.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. arizonae serovar 62:z4,z23:-- str.
           RSK2980]
 gi|160863917|gb|ABX20540.1| hypothetical protein SARI_00614 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 376

 Score = 98.4 bits (244), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 33  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPAVVFDDIVTNEQIQK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAEGISAYYDEL 161


>gi|326781924|ref|YP_004322326.1| ribonucleotide reductase A subunit [Synechococcus phage S-SM2]
 gi|310003114|gb|ADO97512.1| ribonucleotide reductase A subunit [Synechococcus phage S-SM2]
          Length = 397

 Score = 98.4 bits (244), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 3/122 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +         W P EV +Q D   +++   L  +++ +   NL +    +S+  
Sbjct: 52  KYPVFDKLTTQQLGYFWRPEEVSLQKDRGDYQT---LRPEQKHIYTSNLKYQIMLDSIQG 108

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
               +A   + S PE    +    F E +HS ++ YII ++  D  E+F+       I  
Sbjct: 109 RGPGMAFIPYCSLPELEACMEVWGFMEMIHSRSYTYIIKNVYSDPSEVFDKIVTDDRILE 168

Query: 158 KA 159
           +A
Sbjct: 169 RA 170


>gi|227356095|ref|ZP_03840485.1| ribonucleoside-diphosphate reductase 1, beta subunit [Proteus
           mirabilis ATCC 29906]
 gi|227163740|gb|EEI48652.1| ribonucleoside-diphosphate reductase 1, beta subunit [Proteus
           mirabilis ATCC 29906]
          Length = 376

 Score = 98.4 bits (244), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 3/136 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   +   N L D E+ +   NL +    +S+  
Sbjct: 33  KYPIFEKLIEKQLSFFWRPEEVDVSRDRIDY---NALPDHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A    +S PE   ++   +F E +HS ++ +II ++  D   +F+   E   I  
Sbjct: 90  RSPNVAFLPLISIPELETWVETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENKEILK 149

Query: 158 KANWALQYTQTLSSPS 173
           +A     Y   L + +
Sbjct: 150 RARDISSYYDELINLT 165


>gi|296103863|ref|YP_003614009.1| ribonucleotide-diphosphate reductase beta subunit [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295058322|gb|ADF63060.1| ribonucleotide-diphosphate reductase beta subunit [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 376

 Score = 98.4 bits (244), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 33  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDFQ---ALPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPAVVFDDIVTNEQIQK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAEGIAHYYDEL 161


>gi|124487872|gb|ABN12019.1| putative ribonucleotide reductase R2 subunit [Maconellicoccus
           hirsutus]
          Length = 249

 Score = 98.4 bits (244), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 40/102 (39%), Gaps = 7/102 (6%)

Query: 95  LVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYRE 151
           +V +N+V    + +  PE R +   Q     +HS  +  +I SL  D  E   +FN    
Sbjct: 1   IVNDNLVKRFSQEVQVPEARAFFGFQISNAGIHSEMYSVLIESLIKDANEKNLIFNTIET 60

Query: 152 VPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           VP +  K +W L+      +     +  +  +      + F 
Sbjct: 61  VPCVKKKKDWVLRRI----ADDRVTFPLKVVAFATVEGIFFA 98


>gi|56412825|ref|YP_149900.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|197361758|ref|YP_002141394.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
 gi|56127082|gb|AAV76588.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Paratyphi A str. ATCC
           9150]
 gi|197093234|emb|CAR58679.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Paratyphi A str.
           AKU_12601]
          Length = 376

 Score = 98.4 bits (244), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 33  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPAVVFDDIVTNEQIQK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAEGISAYYDEL 161


>gi|190150315|ref|YP_001968840.1| ribonucleoside-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|303253584|ref|ZP_07339722.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307245900|ref|ZP_07527985.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307247988|ref|ZP_07530018.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|307254872|ref|ZP_07536697.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307259315|ref|ZP_07541044.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|307263658|ref|ZP_07545269.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|189915446|gb|ACE61698.1| ribonucleoside-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|302647504|gb|EFL77722.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|306853260|gb|EFM85480.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306855503|gb|EFM87676.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|306862169|gb|EFM94138.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306866682|gb|EFM98541.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306871035|gb|EFN02768.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 376

 Score = 98.4 bits (244), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 61/159 (38%), Gaps = 3/159 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + +        +V +    KY    +      +  W P EV +  D   ++S   L
Sbjct: 10  KNDQLKEPMFFGQNVNVARYDQQKYELFEKLIEKQLSFFWRPEEVDVSQDRIDYQS---L 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            + E+ +   NL +    +S+   +  +A    +S PE   ++    F E +HS ++ +I
Sbjct: 67  PEHEKHIFISNLKYQTLLDSIQGRSPNVAFLPLVSIPELETWIETWTFSETIHSRSYTHI 126

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
           I ++  D   +F+       I  +A     Y   L   S
Sbjct: 127 IRNIVNDPSIVFDDIVTNEEIIKRAKDISCYYDDLIRDS 165


>gi|3891582|pdb|1AV8|A Chain A, Ribonucleotide Reductase R2 Subunit From E. Coli
 gi|3891583|pdb|1AV8|B Chain B, Ribonucleotide Reductase R2 Subunit From E. Coli
          Length = 340

 Score = 98.4 bits (244), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 32  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 89  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 148

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 149 RAEGISSYYDEL 160


>gi|205353394|ref|YP_002227195.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|205273175|emb|CAR38137.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|326628485|gb|EGE34828.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 9]
          Length = 376

 Score = 98.4 bits (244), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 33  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPAVVFDDIVTNEQIQK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAEGISAYYDEL 161


>gi|1941986|pdb|1PFR|A Chain A, Ribonucleoside-Diphosphate Reductase 1 Beta Chain
 gi|1941987|pdb|1PFR|B Chain B, Ribonucleoside-Diphosphate Reductase 1 Beta Chain
          Length = 340

 Score = 98.4 bits (244), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 32  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 89  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 148

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 149 RAEGISSYYDEL 160


>gi|283786035|ref|YP_003365900.1| ribonucleoside-diphosphate reductase 1 beta chain [Citrobacter
           rodentium ICC168]
 gi|282949489|emb|CBG89102.1| ribonucleoside-diphosphate reductase 1 beta chain [Citrobacter
           rodentium ICC168]
          Length = 376

 Score = 98.4 bits (244), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 33  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPAVVFDDIVTNEQIQK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAEGISSYYDEL 161


>gi|83754022|pdb|2ALX|A Chain A, Ribonucleotide Reductase R2 From Escherichia Coli In Space
           Group P6(1)22
          Length = 340

 Score = 98.4 bits (244), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 33  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAEGISSYYDEL 161


>gi|183599610|ref|ZP_02961103.1| hypothetical protein PROSTU_03095 [Providencia stuartii ATCC 25827]
 gi|188021860|gb|EDU59900.1| hypothetical protein PROSTU_03095 [Providencia stuartii ATCC 25827]
          Length = 378

 Score = 98.4 bits (244), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 67/160 (41%), Gaps = 3/160 (1%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           I + ++   + +        +V +    KY    +      +  W P EV +  D   + 
Sbjct: 7   IFSQKRNDQLLEPMFFGQPVNVARYDQQKYPIFEKLIEKQLSFFWRPEEVDVSRDRIDY- 65

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
             NGL D E+ +   NL +    +S+   +  +A+   +S PE   ++   +F E +HS 
Sbjct: 66  --NGLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWSFSETIHSR 123

Query: 130 TFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           ++ +II ++  D   +F+   E   I  +A     Y  TL
Sbjct: 124 SYTHIIRNIVNDPAIIFDDIVENEEILKRARDISAYYDTL 163


>gi|126208467|ref|YP_001053692.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae L20]
 gi|165976419|ref|YP_001652012.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|303251074|ref|ZP_07337260.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307250239|ref|ZP_07532194.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|307252630|ref|ZP_07534523.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307261475|ref|ZP_07543145.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|126097259|gb|ABN74087.1| ribonucleoside-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|165876520|gb|ABY69568.1| ribonucleoside-diphosphate reductase, beta chain [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|302650084|gb|EFL80254.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306857725|gb|EFM89826.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306859875|gb|EFM91895.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306868827|gb|EFN00634.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 376

 Score = 98.0 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 61/159 (38%), Gaps = 3/159 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + +        +V +    KY    +      +  W P EV +  D   ++S   L
Sbjct: 10  KNDQLKEPMFFGQNVNVARYDQQKYELFEKLIEKQLSFFWRPEEVDVSQDRIDYQS---L 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            + E+ +   NL +    +S+   +  +A    +S PE   ++    F E +HS ++ +I
Sbjct: 67  PEHEKHIFISNLKYQTLLDSIQGRSPNVAFLPLVSIPELETWIETWTFSETIHSRSYTHI 126

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
           I ++  D   +F+       I  +A     Y   L   S
Sbjct: 127 IRNIVNDPSIVFDDIVTNEEIIKRAKDISCYYDDLIRDS 165


>gi|16765605|ref|NP_461220.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|62180851|ref|YP_217268.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|161613001|ref|YP_001586966.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Paratyphi B str. SPB7]
 gi|167549728|ref|ZP_02343487.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|167992612|ref|ZP_02573709.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|168237293|ref|ZP_02662351.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|168242393|ref|ZP_02667325.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|168261709|ref|ZP_02683682.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|168466025|ref|ZP_02699895.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|168817991|ref|ZP_02829991.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|194442577|ref|YP_002041539.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194449379|ref|YP_002046332.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194735273|ref|YP_002115349.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|197247637|ref|YP_002147234.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197262505|ref|ZP_03162579.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|198242288|ref|YP_002216347.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|200387602|ref|ZP_03214214.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|204929071|ref|ZP_03220214.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|207857697|ref|YP_002244348.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|213161593|ref|ZP_03347303.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|224583238|ref|YP_002637036.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|1172945|sp|P37427|RIR2_SALTY RecName: Full=Ribonucleoside-diphosphate reductase 1 subunit beta;
           AltName: Full=Protein B2; AltName: Full=Protein R2;
           AltName: Full=Ribonucleotide reductase 1
 gi|510349|emb|CAA51453.1| nrdB [Salmonella enterica subsp. enterica serovar Typhimurium]
 gi|16420817|gb|AAL21179.1| ribonucleoside-diphosphate reductase 1, beta subunit [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|62128484|gb|AAX66187.1| ribonucleoside-diphosphate reductase 1, beta subunit [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|161362365|gb|ABX66133.1| hypothetical protein SPAB_00707 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401240|gb|ACF61462.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194407683|gb|ACF67902.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194710775|gb|ACF89996.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|195631367|gb|EDX49927.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|197211340|gb|ACH48737.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197240760|gb|EDY23380.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|197289678|gb|EDY29041.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|197936804|gb|ACH74137.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|199604700|gb|EDZ03245.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|204321615|gb|EDZ06814.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|205325266|gb|EDZ13105.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|205329222|gb|EDZ15986.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|205338588|gb|EDZ25352.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|205344845|gb|EDZ31609.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|205349363|gb|EDZ35994.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|206709500|emb|CAR33844.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|224467765|gb|ACN45595.1| ribonucleotide-diphosphate reductase beta subunit [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|261247486|emb|CBG25313.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267994368|gb|ACY89253.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           14028S]
 gi|301158836|emb|CBW18349.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           SL1344]
 gi|312913268|dbj|BAJ37242.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           T000240]
 gi|320086715|emb|CBY96487.1| ribonucleoside diphosphage reductase 1, beta subunit, B2
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. 2007-60-3289-1]
 gi|321223022|gb|EFX48093.1| Ribonucleotide reductase of class Ia aerobic, beta subunit
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. TN061786]
 gi|322617030|gb|EFY13936.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315996572]
 gi|322617664|gb|EFY14563.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-1]
 gi|322624706|gb|EFY21535.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-3]
 gi|322630255|gb|EFY27025.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-4]
 gi|322634436|gb|EFY31169.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-1]
 gi|322639146|gb|EFY35838.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-2]
 gi|322640143|gb|EFY36809.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 531954]
 gi|322645769|gb|EFY42293.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322651544|gb|EFY47919.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           OH_2009072675]
 gi|322656105|gb|EFY52404.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322659457|gb|EFY55704.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 19N]
 gi|322665919|gb|EFY62102.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           81038-01]
 gi|322669843|gb|EFY65984.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MD_MDA09249507]
 gi|322673828|gb|EFY69925.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 414877]
 gi|322678586|gb|EFY74642.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 366867]
 gi|322683618|gb|EFY79632.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 413180]
 gi|322687694|gb|EFY83664.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 446600]
 gi|322715327|gb|EFZ06898.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Choleraesuis str. A50]
 gi|323130608|gb|ADX18038.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str. 4/74]
 gi|323196209|gb|EFZ81366.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           609458-1]
 gi|323198377|gb|EFZ83479.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           556150-1]
 gi|323204185|gb|EFZ89196.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 609460]
 gi|323208571|gb|EFZ93510.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           507440-20]
 gi|323212337|gb|EFZ97160.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 556152]
 gi|323218256|gb|EGA02966.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB101509-0077]
 gi|323222986|gb|EGA07335.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB102109-0047]
 gi|323227421|gb|EGA11586.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB110209-0055]
 gi|323232251|gb|EGA16354.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB111609-0052]
 gi|323235716|gb|EGA19800.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009083312]
 gi|323241124|gb|EGA25160.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009085258]
 gi|323244866|gb|EGA28868.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315731156]
 gi|323248577|gb|EGA32508.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2009159199]
 gi|323251597|gb|EGA35465.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008282]
 gi|323255474|gb|EGA39237.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008283]
 gi|323263076|gb|EGA46622.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008284]
 gi|323268136|gb|EGA51613.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008285]
 gi|323270771|gb|EGA54209.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008287]
 gi|326624097|gb|EGE30442.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Dublin str. 3246]
          Length = 376

 Score = 98.0 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 33  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPAVVFDDIVTNEQIQK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAEGISAYYDEL 161


>gi|307257037|ref|ZP_07538813.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306864521|gb|EFM96428.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 376

 Score = 98.0 bits (243), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 61/159 (38%), Gaps = 3/159 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + +        +V +    KY    +      +  W P EV +  D   ++S   L
Sbjct: 10  KNDQLKEPMFFGQNVNVARYDQQKYELFEKLIEKQLSFFWRPEEVDVSQDRIDYQS---L 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            + E+ +   NL +    +S+   +  +A    +S PE   ++    F E +HS ++ +I
Sbjct: 67  PEHEKHIFISNLKYQTLLDSIQGRSPNVAFLPLVSIPELETWIETWTFSETIHSRSYTHI 126

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
           I ++  D   +F+       I  +A     Y   L   S
Sbjct: 127 IRNIVNDPSIVFDDIVTNEEIIKRAKDISCYYDDLIRDS 165


>gi|260913913|ref|ZP_05920387.1| ribonucleoside-diphosphate reductase [Pasteurella dagmatis ATCC
           43325]
 gi|260632000|gb|EEX50177.1| ribonucleoside-diphosphate reductase [Pasteurella dagmatis ATCC
           43325]
          Length = 376

 Score = 98.0 bits (243), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 61/159 (38%), Gaps = 3/159 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + +        +V +    KY    +      +  W P EV +  D   ++    L
Sbjct: 10  KNDQLKEPMFFGQNVNVARYDQQKYETFEKLIEKQLSFFWRPEEVDVSQDRIDYQ---AL 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            + E+ +   NL +    +S+   +  +A+   +S PE   ++    F E +HS ++ +I
Sbjct: 67  PEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPELETWIETWTFSETIHSRSYTHI 126

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
           I ++  D   +F+       I  +A     Y   L   +
Sbjct: 127 IRNIVNDPSVVFDDIVTNEEIIKRAKDISCYYDDLIRDT 165


>gi|291618170|ref|YP_003520912.1| NrdB [Pantoea ananatis LMG 20103]
 gi|291153200|gb|ADD77784.1| NrdB [Pantoea ananatis LMG 20103]
          Length = 387

 Score = 98.0 bits (243), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 63/155 (40%), Gaps = 3/155 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + +        +V +    KY    +      +  W P EV +  D   ++    L
Sbjct: 21  KNDQLKEPMFFGQSVNVARFDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---AL 77

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            D E+ +   NL +    +S+   +  +A+   +S PE   ++   AF E +HS ++ +I
Sbjct: 78  PDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWIETWAFSETIHSRSYTHI 137

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           I ++  D   +F+       I A+A    QY   L
Sbjct: 138 IRNIVNDPAVVFDDIVTNQQILARAQDISQYYDDL 172


>gi|157144813|ref|YP_001452132.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter
           koseri ATCC BAA-895]
 gi|157082018|gb|ABV11696.1| hypothetical protein CKO_00540 [Citrobacter koseri ATCC BAA-895]
          Length = 376

 Score = 98.0 bits (243), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 56/132 (42%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++S   L + E+ +   NL +    +S+  
Sbjct: 33  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDFQS---LPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPAVVFDDIVTNEQIQK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAEGISHYYDEL 161


>gi|322514736|ref|ZP_08067762.1| ribonucleotide-diphosphate reductase beta subunit [Actinobacillus
           ureae ATCC 25976]
 gi|322119331|gb|EFX91447.1| ribonucleotide-diphosphate reductase beta subunit [Actinobacillus
           ureae ATCC 25976]
          Length = 376

 Score = 98.0 bits (243), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 61/159 (38%), Gaps = 3/159 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + +        +V +    KY    +      +  W P EV +  D   ++S   L
Sbjct: 10  KNDQLKEPMFFGQNVNVARYDQQKYELFEKLIEKQLSFFWRPEEVDVSQDRIDYQS---L 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            + E+ +   NL +    +S+   +  +A    +S PE   ++    F E +HS ++ +I
Sbjct: 67  PEHEKHIFISNLKYQTLLDSIQGRSPNVAFLPLVSIPELETWIETWTFSETIHSRSYTHI 126

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
           I ++  D   +F+       I  +A     Y   L   S
Sbjct: 127 IRNIVNDPSIVFDDIVTNEEIIKRAKDISCYYDDLIRDS 165


>gi|168229641|ref|ZP_02654699.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|194471700|ref|ZP_03077684.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|238913487|ref|ZP_04657324.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Tennessee str.
           CDC07-0191]
 gi|194458064|gb|EDX46903.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|205335835|gb|EDZ22599.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
          Length = 376

 Score = 98.0 bits (243), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 33  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPAVVFDDIVTNEQIQK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAEGISAYYDEL 161


>gi|254672337|emb|CBA05511.1| ribonucleoside-diphosphate reductase beta chain [Neisseria
           meningitidis alpha275]
          Length = 345

 Score = 98.0 bits (243), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 58/132 (43%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P E+ +  D   + +   L + E+ +   NL +    +S+  
Sbjct: 40  KYEVFEKLIEKQLSFFWRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQG 96

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+   E   ITA
Sbjct: 97  RSPNVALLPLVSIPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITA 156

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 157 RAEDIACYYDDL 168


>gi|237732274|ref|ZP_04562755.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter sp.
           30_2]
 gi|226907813|gb|EEH93731.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter sp.
           30_2]
          Length = 376

 Score = 98.0 bits (243), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 33  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDFQ---ALPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPAVVFDDIVTNEQIQK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAEGISSYYDEL 161


>gi|261493906|ref|ZP_05990416.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica
           serotype A2 str. BOVINE]
 gi|261495801|ref|ZP_05992236.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261308535|gb|EEY09803.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261310439|gb|EEY11632.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica
           serotype A2 str. BOVINE]
          Length = 376

 Score = 98.0 bits (243), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 61/163 (37%), Gaps = 3/163 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
            +  K   + +        +V +    KY    +      +  W P EV +  D   +  
Sbjct: 6   FSQHKNDQLKEPMFFGQNVNVARYDQQKYEIFEKLIEKQLSFFWRPEEVDVSQDRIDYAQ 65

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              L + E+ +   NL +    +S+   +  +A+   +S PE   ++    F E +HS +
Sbjct: 66  ---LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPELETWIETWTFSETIHSRS 122

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
           + +II ++  D   +F+       I  +A     Y   L   S
Sbjct: 123 YTHIIRNIVNDPSIVFDDIVTNEEIIKRAKDISAYYDDLIRDS 165


>gi|190574752|ref|YP_001972597.1| ribonucleotide-diphosphate reductase subunit beta [Stenotrophomonas
           maltophilia K279a]
 gi|190012674|emb|CAQ46302.1| putative ribonucleoside-diphosphate reductase beta chain
           [Stenotrophomonas maltophilia K279a]
          Length = 346

 Score = 98.0 bits (243), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 72/194 (37%), Gaps = 8/194 (4%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
            T L  I+  E R       ++N ++  +     + Y   +  Y     N W+P EV M+
Sbjct: 2   ATPLDRIKILEPRHPNRSTGIINGQTSGILNWNDIPYPSFYRAYKELSTNFWIPDEVDMK 61

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D   +     L   E+      +G  A+ +S     I   +  ++++P           
Sbjct: 62  LDARQY---GELNAREKNAYDSIIGLLATLDSPQTRFIY-NVAEYITDPAAHANAAIIGQ 117

Query: 123 EEAVHSHTFQYIITSLG--LDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNK 179
           +E +H+ ++ Y++ S+    ++  +F + R  P+I  +    +  Y   +   +     K
Sbjct: 118 QEVIHNESYSYVLASITDLPNQNRIFEIARTHPTIIKRNAPIMGAYDDFMREKTAETLLK 177

Query: 180 RRRSRILTRSLRFL 193
                 +   + F 
Sbjct: 178 SLIQSSILEGINFY 191


>gi|254361270|ref|ZP_04977413.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica
           PHL213]
 gi|153092766|gb|EDN73809.1| ribonucleoside-diphosphate reductase [Mannheimia haemolytica
           PHL213]
          Length = 376

 Score = 98.0 bits (243), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 61/163 (37%), Gaps = 3/163 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
            +  K   + +        +V +    KY    +      +  W P EV +  D   +  
Sbjct: 6   FSQHKNDQLKEPMFFGQNVNVARYDQQKYEIFEKLIEKQLSFFWRPEEVDVSQDRIDYAQ 65

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              L + E+ +   NL +    +S+   +  +A+   +S PE   ++    F E +HS +
Sbjct: 66  ---LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPELETWIETWTFSETIHSRS 122

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
           + +II ++  D   +F+       I  +A     Y   L   S
Sbjct: 123 YTHIIRNIVNDPSIVFDDIVTNEEIIKRAKDISAYYDDLIRDS 165


>gi|194366071|ref|YP_002028681.1| ribonucleotide-diphosphate reductase subunit beta [Stenotrophomonas
           maltophilia R551-3]
 gi|194348875|gb|ACF51998.1| Ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia
           R551-3]
          Length = 346

 Score = 98.0 bits (243), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 72/194 (37%), Gaps = 8/194 (4%)

Query: 4   NTGLSPIQAGEKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
            T L  I+  E R       ++N R+  +     + Y   +  Y     N W+P EV M+
Sbjct: 2   ATPLDRIKILEPRHPNRSTGIINGRTSGILNWNDIPYPSFYRAYKELSTNFWIPDEVDMK 61

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D   +     L   E+      +G  A+ +S     I   +  ++++P           
Sbjct: 62  LDARQY---GELNAREKNAYDSIIGLLATLDSPQTRFIY-NVAEYITDPAAHANAAIIGQ 117

Query: 123 EEAVHSHTFQYIITSLG--LDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNK 179
           +E +H+ ++ Y++ S+    ++  +F + R  P+I  +    +  Y   +   +     K
Sbjct: 118 QEVIHNESYSYVLASITDLSNQNRIFEIARTHPTIIKRNAPIMGAYDDFMREKTAETLLK 177

Query: 180 RRRSRILTRSLRFL 193
                 +   + F 
Sbjct: 178 SLIQSSILEGINFY 191


>gi|238897538|ref|YP_002923217.1| ribonucleoside-diphosphate reductase 1, beta subunit [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
 gi|229465295|gb|ACQ67069.1| ribonucleoside-diphosphate reductase 1, beta subunit [Candidatus
           Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
          Length = 376

 Score = 98.0 bits (243), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 56/132 (42%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    E      +  W P E+ +  D   ++S   L + E+ +   NL +    +S+  
Sbjct: 33  KYPIFEELIEKQLSFFWRPEEIDVSRDRIDYQS---LPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWIETWAFSETIHSRSYTHIIRNIVNDPSCIFDDIVTNNEILK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAKDISAYYDDL 161


>gi|254493923|ref|ZP_05107094.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae 1291]
 gi|260440303|ref|ZP_05794119.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae DGI2]
 gi|268594982|ref|ZP_06129149.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           gonorrhoeae 35/02]
 gi|268596639|ref|ZP_06130806.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           gonorrhoeae FA19]
 gi|268599210|ref|ZP_06133377.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae MS11]
 gi|268601557|ref|ZP_06135724.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID18]
 gi|268603896|ref|ZP_06138063.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID1]
 gi|268682359|ref|ZP_06149221.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID332]
 gi|268684517|ref|ZP_06151379.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae
           SK-92-679]
 gi|268686827|ref|ZP_06153689.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae
           SK-93-1035]
 gi|291043595|ref|ZP_06569311.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           gonorrhoeae DGI2]
 gi|293398906|ref|ZP_06643071.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           gonorrhoeae F62]
 gi|59717937|gb|AAW89342.1| putative ribonucleoside diphosphate reductase I beta chain
           [Neisseria gonorrhoeae FA 1090]
 gi|226512963|gb|EEH62308.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae 1291]
 gi|268548371|gb|EEZ43789.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           gonorrhoeae 35/02]
 gi|268550427|gb|EEZ45446.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           gonorrhoeae FA19]
 gi|268583341|gb|EEZ48017.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae MS11]
 gi|268585688|gb|EEZ50364.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID18]
 gi|268588027|gb|EEZ52703.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID1]
 gi|268622643|gb|EEZ55043.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae PID332]
 gi|268624801|gb|EEZ57201.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae
           SK-92-679]
 gi|268627111|gb|EEZ59511.1| ribonucleoside-diphosphate reductase [Neisseria gonorrhoeae
           SK-93-1035]
 gi|291012058|gb|EFE04047.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           gonorrhoeae DGI2]
 gi|291610320|gb|EFF39430.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           gonorrhoeae F62]
          Length = 384

 Score = 98.0 bits (243), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 58/132 (43%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P E+ +  D   + +   L + E+ +   NL +    +S+  
Sbjct: 40  KYEVFEKLIEKQLSFFWRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQG 96

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+   E   ITA
Sbjct: 97  RSPNVALLPLVSIPELETWVETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITA 156

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 157 RAEDIACYYDDL 168


>gi|327394563|dbj|BAK11985.1| ribonucleoside-diphosphate reductase 1 beta subunit NrdB [Pantoea
           ananatis AJ13355]
          Length = 376

 Score = 98.0 bits (243), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 63/155 (40%), Gaps = 3/155 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + +        +V +    KY    +      +  W P EV +  D   ++    L
Sbjct: 10  KNDQLKEPMFFGQSVNVARFDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---AL 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            D E+ +   NL +    +S+   +  +A+   +S PE   ++   AF E +HS ++ +I
Sbjct: 67  PDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWIETWAFSETIHSRSYTHI 126

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           I ++  D   +F+       I A+A    QY   L
Sbjct: 127 IRNIVNDPAVVFDDIVTNQQILARAQDISQYYDDL 161


>gi|7226528|gb|AAF41664.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis MC58]
 gi|254670476|emb|CBA06168.1| ribonucleoside-diphosphate reductase beta chain [Neisseria
           meningitidis alpha153]
          Length = 384

 Score = 98.0 bits (243), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 58/132 (43%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P E+ +  D   + +   L + E+ +   NL +    +S+  
Sbjct: 40  KYEVFEKLIEKQLSFFWRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQG 96

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+   E   ITA
Sbjct: 97  RSPNVALLPLVSIPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITA 156

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 157 RAEDIACYYDDL 168


>gi|15602584|ref|NP_245656.1| ribonucleotide-diphosphate reductase subunit beta [Pasteurella
           multocida subsp. multocida str. Pm70]
 gi|12721013|gb|AAK02803.1| NrdB [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 376

 Score = 98.0 bits (243), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 61/159 (38%), Gaps = 3/159 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + +        +V +    KY    +      +  W P EV +  D   ++    L
Sbjct: 10  KNDQLKEPMFFGQNVNVARYDQQKYETFEKLIEKQLSFFWRPEEVDVSQDRIDYQ---AL 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            + E+ +   NL +    +S+   +  +A+   +S PE   ++    F E +HS ++ +I
Sbjct: 67  PEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPELETWIETWTFSETIHSRSYTHI 126

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
           I ++  D   +F+       I  +A     Y   L   S
Sbjct: 127 IRNIVNDPSVIFDDIVTNEEIIKRAKDISAYYDDLIRDS 165


>gi|297250515|ref|ZP_06864465.2| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           polysaccharea ATCC 43768]
 gi|296838835|gb|EFH22773.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           polysaccharea ATCC 43768]
          Length = 377

 Score = 98.0 bits (243), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 58/132 (43%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P E+ +  D   + +   L + E+ +   NL +    +S+  
Sbjct: 33  KYEVFEKLIEKQLSFFWRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+   E   ITA
Sbjct: 90  RSPNVALLPLVSIPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITA 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAEDIACYYDDL 161


>gi|16761204|ref|NP_456821.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. CT18]
 gi|29141101|ref|NP_804443.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|25285831|pir||AD0791 ribonucleoside-diphosphate reductase (EC 1.17.4.1) - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16503503|emb|CAD07510.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Typhi]
 gi|29136727|gb|AAO68292.1| ribonucleoside-diphosphate reductase 1 beta chain [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
          Length = 376

 Score = 98.0 bits (243), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 33  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPAIVFDDIVTNEQIQK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAEGISAYYDEL 161


>gi|323945044|gb|EGB41109.1| nrdB protein [Escherichia coli H120]
          Length = 197

 Score = 97.6 bits (242), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 33  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAEGISSYYDEL 161


>gi|319410557|emb|CBY90925.1| ribonucleoside-diphosphate reductase beta subunit (ribonucleotide
           reductase) [Neisseria meningitidis WUE 2594]
 gi|325208250|gb|ADZ03702.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis NZ-05/33]
          Length = 384

 Score = 97.6 bits (242), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 58/132 (43%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P E+ +  D   + +   L + E+ +   NL +    +S+  
Sbjct: 40  KYEVFEKLIEKQLSFFWRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQG 96

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+   E   ITA
Sbjct: 97  RSPNVALLPLVSIPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITA 156

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 157 RAEDIACYYDDL 168


>gi|313668429|ref|YP_004048713.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
           lactamica ST-640]
 gi|313005891|emb|CBN87347.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
           lactamica 020-06]
          Length = 377

 Score = 97.6 bits (242), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 58/132 (43%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P E+ +  D   + +   L + E+ +   NL +    +S+  
Sbjct: 33  KYEVFEKLIEKQLSFFWRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+   E   ITA
Sbjct: 90  RSPNVALLPLVSIPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITA 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAEDIACYYDDL 161


>gi|163748931|ref|ZP_02156182.1| ribonucleotide-diphosphate reductase beta subunit [Shewanella
           benthica KT99]
 gi|161331307|gb|EDQ02195.1| ribonucleotide-diphosphate reductase beta subunit [Shewanella
           benthica KT99]
          Length = 376

 Score = 97.6 bits (242), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   +     L D E+ +   NL +    +S+  
Sbjct: 33  KYEVFEKLIEKQLSFFWRPEEVDVSKDKIDYA---ALPDHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A    +S PE   ++   +F E +HS ++ +II ++  D   +F+   +   I  
Sbjct: 90  RSPNVAFLPLVSLPELETWIETWSFSETIHSRSYTHIIRNIVNDPSIIFDDIVKNEEILK 149

Query: 158 KANWALQYTQTL 169
           +A    QY   L
Sbjct: 150 RATDIAQYYDDL 161


>gi|161870162|ref|YP_001599332.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           meningitidis 053442]
 gi|161595715|gb|ABX73375.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
           meningitidis 053442]
          Length = 384

 Score = 97.6 bits (242), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 58/132 (43%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P E+ +  D   + +   L + E+ +   NL +    +S+  
Sbjct: 40  KYEVFEKLIEKQLSFFWRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQG 96

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+   E   ITA
Sbjct: 97  RSPNVALLPLVSIPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITA 156

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 157 RAEDIACYYDDL 168


>gi|161353784|ref|NP_274308.2| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           meningitidis MC58]
 gi|304387414|ref|ZP_07369605.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           meningitidis ATCC 13091]
 gi|304338507|gb|EFM04626.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           meningitidis ATCC 13091]
 gi|316984078|gb|EFV63056.1| ribonucleoside-diphosphate reductase 1 subunit beta [Neisseria
           meningitidis H44/76]
 gi|325134468|gb|EGC57113.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M13399]
 gi|325140485|gb|EGC63006.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis CU385]
 gi|325144569|gb|EGC66868.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M01-240013]
 gi|325200084|gb|ADY95539.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis H44/76]
 gi|325204292|gb|ADY99745.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M01-240355]
 gi|325205936|gb|ADZ01389.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M04-240196]
          Length = 377

 Score = 97.6 bits (242), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 58/132 (43%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P E+ +  D   + +   L + E+ +   NL +    +S+  
Sbjct: 33  KYEVFEKLIEKQLSFFWRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+   E   ITA
Sbjct: 90  RSPNVALLPLVSIPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITA 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAEDIACYYDDL 161


>gi|254805092|ref|YP_003083313.1| ribonucleoside-diphosphate reductase beta chain [Neisseria
           meningitidis alpha14]
 gi|254668634|emb|CBA06257.1| ribonucleoside-diphosphate reductase beta chain [Neisseria
           meningitidis alpha14]
          Length = 384

 Score = 97.6 bits (242), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 58/132 (43%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P E+ +  D   + +   L + E+ +   NL +    +S+  
Sbjct: 40  KYEVFEKLIEKQLSFFWRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQG 96

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+   E   ITA
Sbjct: 97  RSPNVALLPLVSIPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITA 156

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 157 RAEDIACYYDDL 168


>gi|161572976|ref|YP_207754.2| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae FA 1090]
 gi|194098862|ref|YP_002001926.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae NCCP11945]
 gi|239999147|ref|ZP_04719071.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae 35/02]
 gi|240013945|ref|ZP_04720858.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae DGI18]
 gi|240016387|ref|ZP_04722927.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae FA6140]
 gi|240080506|ref|ZP_04725049.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae FA19]
 gi|240113126|ref|ZP_04727616.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae MS11]
 gi|240115882|ref|ZP_04729944.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae PID18]
 gi|240118180|ref|ZP_04732242.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae PID1]
 gi|240121514|ref|ZP_04734476.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae PID24-1]
 gi|240123728|ref|ZP_04736684.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae PID332]
 gi|240125919|ref|ZP_04738805.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae SK-92-679]
 gi|240128431|ref|ZP_04741092.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae SK-93-1035]
 gi|193934152|gb|ACF29976.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           gonorrhoeae NCCP11945]
          Length = 377

 Score = 97.6 bits (242), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 58/132 (43%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P E+ +  D   + +   L + E+ +   NL +    +S+  
Sbjct: 33  KYEVFEKLIEKQLSFFWRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+   E   ITA
Sbjct: 90  RSPNVALLPLVSIPELETWVETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITA 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAEDIACYYDDL 161


>gi|317164437|gb|ADV07978.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           gonorrhoeae TCDC-NG08107]
          Length = 377

 Score = 97.6 bits (242), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 58/132 (43%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P E+ +  D   + +   L + E+ +   NL +    +S+  
Sbjct: 33  KYEVFEKLIEKQLSFFWRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+   E   ITA
Sbjct: 90  RSPNVALLPLVSIPELETWVETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITA 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAEDIACYYDDL 161


>gi|218768312|ref|YP_002342824.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           meningitidis Z2491]
 gi|121052320|emb|CAM08650.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
           meningitidis Z2491]
 gi|261392428|emb|CAX49973.1| ribonucleoside-diphosphate reductase beta subunit (ribonucleotide
           reductase) [Neisseria meningitidis 8013]
          Length = 377

 Score = 97.6 bits (242), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 58/132 (43%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P E+ +  D   + +   L + E+ +   NL +    +S+  
Sbjct: 33  KYEVFEKLIEKQLSFFWRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+   E   ITA
Sbjct: 90  RSPNVALLPLVSIPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITA 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAEDIACYYDDL 161


>gi|113461104|ref|YP_719172.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           somnus 129PT]
 gi|170717681|ref|YP_001784756.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           somnus 2336]
 gi|112823147|gb|ABI25236.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Haemophilus somnus 129PT]
 gi|168825810|gb|ACA31181.1| Ribonucleoside-diphosphate reductase [Haemophilus somnus 2336]
          Length = 376

 Score = 97.6 bits (242), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 63/167 (37%), Gaps = 3/167 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
            +  K   + +        +V +    KY    +      +  W P EV +  D   ++ 
Sbjct: 6   FSQTKNNQLLEPMFFGQNVNVARYDQQKYETFEKLIEKQLSFFWRPEEVDVSQDRIDYQ- 64

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              L + E+ +   NL +    +S+   +  +A+   +S PE   ++    F E +HS +
Sbjct: 65  --ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPELETWIETWTFSETIHSRS 122

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYW 177
           + +II ++  D   +F+       I  +A     Y   L   S  Y 
Sbjct: 123 YTHIIRNIVNDPSIVFDDIVTNEEIIKRARDISSYYDDLIRDSQLYG 169


>gi|308389409|gb|ADO31729.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
           meningitidis alpha710]
          Length = 384

 Score = 97.6 bits (242), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 58/132 (43%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P E+ +  D   + +   L + E+ +   NL +    +S+  
Sbjct: 40  KYEVFEKLIEKQLSFFWRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQG 96

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+   E   ITA
Sbjct: 97  RSPNVALLPLVSIPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITA 156

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 157 RAEDIACYYDDL 168


>gi|213612729|ref|ZP_03370555.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-2068]
          Length = 234

 Score = 97.6 bits (242), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 33  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPAVVFDDIVTNEQIQK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAEGISAYYDEL 161


>gi|121635003|ref|YP_975248.1| ribonucleotide-diphosphate reductase subunit beta [Neisseria
           meningitidis FAM18]
 gi|120866709|emb|CAM10461.1| ribonucleoside diphosphate reductase I beta chain [Neisseria
           meningitidis FAM18]
 gi|325128288|gb|EGC51172.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis N1568]
 gi|325130346|gb|EGC53112.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis OX99.30304]
 gi|325132508|gb|EGC55201.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M6190]
 gi|325136206|gb|EGC58814.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M0579]
 gi|325138282|gb|EGC60851.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis ES14902]
 gi|325142424|gb|EGC64828.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis 961-5945]
 gi|325198443|gb|ADY93899.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis G2136]
 gi|325201998|gb|ADY97452.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           meningitidis M01-240149]
          Length = 377

 Score = 97.6 bits (242), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 58/132 (43%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P E+ +  D   + +   L + E+ +   NL +    +S+  
Sbjct: 33  KYEVFEKLIEKQLSFFWRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+   E   ITA
Sbjct: 90  RSPNVALLPLVSIPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITA 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAEDIACYYDDL 161


>gi|50120137|ref|YP_049304.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
           atrosepticum SCRI1043]
 gi|49610663|emb|CAG74108.1| ribonucleoside-diphosphate reductase 1 beta chain [Pectobacterium
           atrosepticum SCRI1043]
          Length = 376

 Score = 97.6 bits (242), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 62/155 (40%), Gaps = 3/155 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + +        +V +    KY    +      +  W P EV +  D   ++    L
Sbjct: 10  KNDQLLEPMFFGQSVNVARFDQQKYEIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---AL 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            D E+ +   NL +    +S+   +  +A+   +S PE   ++   AF E +HS ++ +I
Sbjct: 67  PDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHI 126

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           I ++  D   +F+       I  +A     Y  +L
Sbjct: 127 IRNIVNDPSLVFDDIVANEEILKRAKDISGYYDSL 161


>gi|261400675|ref|ZP_05986800.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           lactamica ATCC 23970]
 gi|269209585|gb|EEZ76040.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           lactamica ATCC 23970]
          Length = 377

 Score = 97.6 bits (242), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 58/132 (43%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P E+ +  D   + +   L + E+ +   NL +    +S+  
Sbjct: 33  KYEVFEKLIEKQLSFFWRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+   E   ITA
Sbjct: 90  RSPNVALLPLVSIPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITA 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAEDIACYYDDL 161


>gi|301156451|emb|CBW15922.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           [Haemophilus parainfluenzae T3T1]
          Length = 376

 Score = 97.6 bits (242), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 61/163 (37%), Gaps = 3/163 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
            +  K   + +        +V +    KY    +      +  W P EV +  D   +  
Sbjct: 6   FSQTKNDQLKEPMFFGQNVNVARYDQQKYETFEKLIEKQLSFFWRPEEVDVSQDRIDYA- 64

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              L + E+ +   NL +    +S+   +  +A+   +S PE   ++    F E +HS +
Sbjct: 65  --ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPELETWIETWTFSETIHSRS 122

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
           + +II ++  D   +F+       I  +A     Y   L   S
Sbjct: 123 YTHIIRNIVNDPSIVFDDIVTNEEIIKRARDISSYYDDLIRDS 165


>gi|167623961|ref|YP_001674255.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           halifaxensis HAW-EB4]
 gi|167353983|gb|ABZ76596.1| Ribonucleoside-diphosphate reductase [Shewanella halifaxensis
           HAW-EB4]
          Length = 376

 Score = 97.6 bits (242), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   +     L + E+ +   NL +    +S+  
Sbjct: 33  KYEVFEKLIEKQLSFFWRPEEVDVSRDKIDYA---ALPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A    +S PE   ++   +F E +HS ++ +II ++  D   +F+   E   I  
Sbjct: 90  RSPNVAFLPLVSLPELETWIETWSFSETIHSRSYTHIIRNIVNDPSIVFDDIVENEEILK 149

Query: 158 KANWALQYTQTL 169
           +A+   +Y   L
Sbjct: 150 RASDIAKYYDHL 161


>gi|33152746|ref|NP_874099.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           ducreyi 35000HP]
 gi|33148970|gb|AAP96488.1| ribonucleoside-diphosphate reductase, beta chain [Haemophilus
           ducreyi 35000HP]
          Length = 376

 Score = 97.2 bits (241), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 60/159 (37%), Gaps = 3/159 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + +        +V +    KY    +      +  W P EV +  D   ++    L
Sbjct: 10  KNDQLKEPMFFGQNVNVARYDQQKYELFEKLIEKQLSFFWRPEEVDVSQDRIDYQ---AL 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            + E+ +   NL +    +S+   +  +A    +S PE   ++    F E +HS ++ +I
Sbjct: 67  PEHEKHIFISNLKYQTLLDSIQGRSPNVAFLPLVSIPELETWIETWTFSETIHSRSYTHI 126

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
           I ++  D   +F+       I  +A     Y   L   S
Sbjct: 127 IRNIVNDPSIVFDDIVTNEEIIKRARDISCYYDDLIRDS 165


>gi|113200701|ref|YP_717864.1| ribonucleotide reductase subunit B [Synechococcus phage syn9]
 gi|76574600|gb|ABA47165.1| ribonucleotide reductase subunit B [Synechococcus phage syn9]
          Length = 387

 Score = 97.2 bits (241), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 57/141 (40%), Gaps = 3/141 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY              W P EV +Q D + +     LT++++ +   NL +    +S+  
Sbjct: 42  KYPVFDRLTQQQLGYFWRPEEVSLQKDRSDYAQ---LTENQKHIFTSNLKYQIMLDSVQG 98

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
               +A   + S PE    +    F E +HS ++ +II ++  +  ++F+   E   +  
Sbjct: 99  RGPGMAFIPYCSLPELEACMTVWEFMEMIHSRSYTHIIKNVYPNPSDVFDTILEDERVLE 158

Query: 158 KANWALQYTQTLSSPSFHYWN 178
           +A+   +        +  Y N
Sbjct: 159 RASSVTESYDDFIQHAQEYGN 179


>gi|319779630|ref|YP_004130543.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Taylorella equigenitalis MCE9]
 gi|317109654|gb|ADU92400.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Taylorella equigenitalis MCE9]
          Length = 377

 Score = 97.2 bits (241), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P E+ +  D   +    GL D E+ +   NL +    +S+  
Sbjct: 33  KYEIFEKLIEKQLSFFWRPEEIDVSQDRIDYA---GLPDHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A    +S PE   ++   +F E +HS ++ +II ++ +D   +F+       I  
Sbjct: 90  RSPNVAFLPLVSIPELETWIETWSFSETIHSRSYTHIIRNISVDPSSIFDDIVRNKHILE 149

Query: 158 KANWALQYTQTL 169
           +A    +Y   L
Sbjct: 150 RAQDISKYYDEL 161


>gi|156933156|ref|YP_001437072.1| ribonucleotide-diphosphate reductase subunit beta [Cronobacter
           sakazakii ATCC BAA-894]
 gi|156531410|gb|ABU76236.1| hypothetical protein ESA_00966 [Cronobacter sakazakii ATCC BAA-894]
          Length = 376

 Score = 97.2 bits (241), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 33  KYEIFEKLIEKQLSFFWRPEEVDVSRDRIDFQ---ALPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPAVVFDDIVTNEQILK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAEGISHYYDDL 161


>gi|309379219|emb|CBX22176.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 384

 Score = 97.2 bits (241), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 58/132 (43%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P E+ +  D   + +   L + E+ +   NL +    +S+  
Sbjct: 40  KYEVFEKLIEKQLSFFWRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQG 96

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+   E   ITA
Sbjct: 97  RSPNVALLPLVSIPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITA 156

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 157 RAEDIACYYDDL 168


>gi|290473788|ref|YP_003466662.1| ribonucleoside-diphosphate reductase 1 subunit beta [Xenorhabdus
           bovienii SS-2004]
 gi|289173095|emb|CBJ79868.1| ribonucleoside-diphosphate reductase 1, beta subunit [Xenorhabdus
           bovienii SS-2004]
          Length = 376

 Score = 97.2 bits (241), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 54/132 (40%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   +   N L D E+ +   NL +    +S+  
Sbjct: 33  KYPIFEKLIEKQLSFFWRPEEVDVSRDRIDY---NALPDHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A    +S PE   ++   +F E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVAFLPLISIPELETWIETWSFSETIHSRSYTHIIRNIVNDPAIVFDDIVANEQILK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAKDISGYYDVL 161


>gi|152979144|ref|YP_001344773.1| ribonucleotide-diphosphate reductase subunit beta [Actinobacillus
           succinogenes 130Z]
 gi|150840867|gb|ABR74838.1| Ribonucleoside-diphosphate reductase [Actinobacillus succinogenes
           130Z]
          Length = 376

 Score = 97.2 bits (241), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 60/159 (37%), Gaps = 3/159 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + +        +V +    KY    +      +  W P EV +  D   +     L
Sbjct: 10  KNDQLLEPMFFGQNVNVARYDQQKYETFEKLIEKQLSFFWRPEEVDVSQDRIDYA---AL 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            D E+ +   NL +    +S+   +  +A+   +S PE   ++    F E +HS ++ +I
Sbjct: 67  PDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPELETWIETWTFSETIHSRSYTHI 126

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
           I ++  D   +F+       I  +A     Y   L   S
Sbjct: 127 IRNIVNDPSIVFDDIVTNEEIIKRAKDISAYYDDLIRDS 165


>gi|260598671|ref|YP_003211242.1| ribonucleotide-diphosphate reductase subunit beta [Cronobacter
           turicensis z3032]
 gi|260217848|emb|CBA32365.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Cronobacter
           turicensis z3032]
          Length = 376

 Score = 97.2 bits (241), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 33  KYEIFEKLIEKQLSFFWRPEEVDVSRDRIDFQ---ALPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPAVVFDDIVTNEQILK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAEGISHYYDDL 161


>gi|319785673|ref|YP_004145148.1| ribonucleotide reductase [Pseudoxanthomonas suwonensis 11-1]
 gi|317464185|gb|ADV25917.1| ribonucleotide reductase [Pseudoxanthomonas suwonensis 11-1]
          Length = 354

 Score = 97.2 bits (241), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 67/184 (36%), Gaps = 8/184 (4%)

Query: 14  EKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
           E R       ++N  +  +     + Y   +  Y     N W+P EV M+ D   +    
Sbjct: 20  EPRHPNRSTGIINGTTSGILNWNDIPYPSFYRAYKELSTNFWIPDEVDMKSDARQY---G 76

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
            L+  E+      +G  A+ +S     I   +  ++++P           +E +H+ ++ 
Sbjct: 77  ELSAREKNAFDSIIGLLATLDSPQTRFIY-NVAEYITDPAAHANAAIIGQQEVIHNESYS 135

Query: 133 YIITSLG--LDEGELFNMYREVPSITAKAN-WALQYTQTLSSPSFHYWNKRRRSRILTRS 189
           Y++ S+    ++  +F + R  P+I  +       Y   +   +     +      +   
Sbjct: 136 YVLASITDLANQNRVFEIARTHPTILRRNAPIMAAYDDFMREKTAETLLRALIQSSILEG 195

Query: 190 LRFL 193
           + F 
Sbjct: 196 INFY 199


>gi|326784480|ref|YP_004325029.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM7]
 gi|310004513|gb|ADO98905.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-SSM7]
          Length = 388

 Score = 96.8 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 56/147 (38%), Gaps = 8/147 (5%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           ++              W P EV +Q D A +     LTD ++ +   NL +    +S+  
Sbjct: 42  RFPTFDRLTQQQLGYFWRPEEVSLQKDRADYAQ---LTDQQKHIFTSNLKYQIMLDSVQG 98

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
               +A   + S PE    +    F E +HS ++ YII ++  D  ELF+      +I +
Sbjct: 99  RAPGMAFIPYCSLPELEGCMQVWQFMEMIHSRSYTYIIKNVYSDPSELFDTILTDDNILS 158

Query: 158 KANWALQYTQTLSSPSFHYWNKRRRSR 184
           +A    +     S   F  +       
Sbjct: 159 RAESVTK-----SYDDFINYAHEYDQS 180


>gi|85059563|ref|YP_455265.1| ribonucleotide-diphosphate reductase subunit beta [Sodalis
           glossinidius str. 'morsitans']
 gi|84780083|dbj|BAE74860.1| ribonucleoside-diphosphate reductase 1 beta subunit [Sodalis
           glossinidius str. 'morsitans']
          Length = 376

 Score = 96.8 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 61/155 (39%), Gaps = 3/155 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + +        +V +    KY    +      +  W P EV +  D   ++    L
Sbjct: 10  KNDQLLEPMFFGQSVNVARFDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---AL 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            + E+ +   NL +    +S+   +  +A+   +S PE   ++   AF E +HS ++ +I
Sbjct: 67  PEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHI 126

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           I ++  D   +F+       I  +A     Y   L
Sbjct: 127 IRNIVNDPSLVFDDIVTNEEILKRAKDISGYYDGL 161


>gi|33358114|pdb|1PIM|A Chain A, Dithionite Reduced E. Coli Ribonucleotide Reductase R2
           Subunit, D84e Mutant
 gi|33358115|pdb|1PIM|B Chain B, Dithionite Reduced E. Coli Ribonucleotide Reductase R2
           Subunit, D84e Mutant
 gi|33358116|pdb|1PIU|A Chain A, Oxidized Ribonucleotide Reductase R2-D84e Mutant
           Containing Oxo-Bridged Diferric Cluster
 gi|33358117|pdb|1PIU|B Chain B, Oxidized Ribonucleotide Reductase R2-D84e Mutant
           Containing Oxo-Bridged Diferric Cluster
 gi|42543285|pdb|1PIZ|A Chain A, Ribonucleotide Reductase R2 D84e Mutant Soaked With
           Ferrous Ions At Neutral Ph
 gi|42543286|pdb|1PIZ|B Chain B, Ribonucleotide Reductase R2 D84e Mutant Soaked With
           Ferrous Ions At Neutral Ph
          Length = 375

 Score = 96.8 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    ES+  
Sbjct: 32  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLESIQG 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 89  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 148

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 149 RAEGISSYYDEL 160


>gi|127512873|ref|YP_001094070.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           loihica PV-4]
 gi|126638168|gb|ABO23811.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella loihica PV-4]
          Length = 376

 Score = 96.8 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   +     L D E+ +   NL +    +S+  
Sbjct: 33  KYEVFEKLIEKQLSFFWRPEEVDVSKDKIDYA---ALPDHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A    +S PE   ++   +F E +HS ++ +II ++  D   +F+   +   I  
Sbjct: 90  RSPNVAFLPLVSLPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVQNEEILK 149

Query: 158 KANWALQYTQTL 169
           +A+    Y   L
Sbjct: 150 RASDIADYYDNL 161


>gi|325578589|ref|ZP_08148689.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           parainfluenzae ATCC 33392]
 gi|325159825|gb|EGC71955.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           parainfluenzae ATCC 33392]
          Length = 376

 Score = 96.8 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 60/159 (37%), Gaps = 3/159 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + +        +V +    KY    +      +  W P EV +  D   +     L
Sbjct: 10  KNDQLKEPMFFGQNVNVARYDQQKYETFEKLIEKQLSFFWRPEEVDVSQDRIDYA---AL 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            + E+ +   NL +    +S+   +  +A+   +S PE   ++    F E +HS ++ +I
Sbjct: 67  PEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPELETWIETWTFSETIHSRSYTHI 126

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
           I ++  D   +F+       I  +A     Y   L   S
Sbjct: 127 IRNIVNDPSIVFDDIVTNEEIIKRARDISSYYDDLIRDS 165


>gi|120598753|ref|YP_963327.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella sp.
           W3-18-1]
 gi|146293170|ref|YP_001183594.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           putrefaciens CN-32]
 gi|120558846|gb|ABM24773.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella sp. W3-18-1]
 gi|145564860|gb|ABP75795.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella putrefaciens CN-32]
 gi|319426318|gb|ADV54392.1| ribonucleotide reductase [Shewanella putrefaciens 200]
          Length = 376

 Score = 96.8 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 54/132 (40%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   +     L D E+ +   NL +    +S+  
Sbjct: 33  KYEVFEKLIEKQLSFFWRPEEVDVSRDKIDYND---LPDHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A    +S PE   ++   +F E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVAFLPLVSLPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVIFDDIVVNKEILR 149

Query: 158 KANWALQYTQTL 169
           +A    +Y   L
Sbjct: 150 RATDIAEYYDHL 161


>gi|253574542|ref|ZP_04851883.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           sp. oral taxon 786 str. D14]
 gi|251846247|gb|EES74254.1| ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           sp. oral taxon 786 str. D14]
          Length = 343

 Score = 96.8 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 71/179 (39%), Gaps = 7/179 (3%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           N   + +    S +     ++    ++ Y     NHW+  E+PM  D   +     L  +
Sbjct: 13  NKSTRIIGGECSGILNWNDIRMPHMYKLYKVLLLNHWIADEIPMAKDAQQFA---LLDPE 69

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
           E+   K N+   A  +S+     V  + R+ ++            +E VH+ ++ Y+++S
Sbjct: 70  EQRTFKINISLLAVLDSMQTM-FVGDVKRYFTDSSLEAISAIIGQQEVVHNQSYSYVLSS 128

Query: 138 LGL--DEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           +    ++ E+F  ++  P +  +  +    Y      P+   + +   + ++   + F 
Sbjct: 129 IVSEQEQKEIFEYWKHDPVLLDRNKFIANIYQNFRDEPTPQSFFEALVADLILEGIFFY 187


>gi|300717619|ref|YP_003742422.1| Ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           billingiae Eb661]
 gi|299063455|emb|CAX60575.1| Ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           billingiae Eb661]
          Length = 376

 Score = 96.8 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 64/155 (41%), Gaps = 3/155 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   +D+        +V +    KY    +      +  W P EV +  D   ++   GL
Sbjct: 10  KNNQLDEPMFFGQSVNVARFDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---GL 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            D E+ +   NL +    +S+   +  +A+   +S PE   ++   AF E +HS ++ +I
Sbjct: 67  PDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWIETWAFSETIHSRSYTHI 126

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           I ++  D   +F+       I ++A     Y   L
Sbjct: 127 IRNIVNDPAIVFDDIVTNEQILSRAKDISGYYDDL 161


>gi|4389291|pdb|1BIQ|A Chain A, Ribonucleoside-Diphosphate Reductase 1 Beta Chain Mutant
           E238a
          Length = 375

 Score = 96.8 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 32  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS +F +II ++  D   +F+       I  
Sbjct: 89  RSPNVALLPLISIPELETWVETWAFSETIHSRSFTHIIRNIVNDPSVVFDDIVTNEQIQK 148

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 149 RAEGISSYYDEL 160


>gi|15837799|ref|NP_298487.1| ribonucleotide-diphosphate reductase subunit beta [Xylella
           fastidiosa 9a5c]
 gi|28198393|ref|NP_778707.1| ribonucleotide-diphosphate reductase subunit beta [Xylella
           fastidiosa Temecula1]
 gi|9106169|gb|AAF84007.1|AE003954_4 ribonucleoside-diphosphate reductase beta chain [Xylella fastidiosa
           9a5c]
 gi|28056463|gb|AAO28356.1| ribonucleoside-diphosphate reductase beta chain [Xylella fastidiosa
           Temecula1]
          Length = 346

 Score = 96.5 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 69/184 (37%), Gaps = 8/184 (4%)

Query: 14  EKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
           E R       ++N ++  +     + Y   +  Y     N W+P EV M+ D   +    
Sbjct: 12  EPRNPNRSTGIINGKTSGILNWNDIPYPSFYRAYKELSTNFWIPDEVDMKIDKRQY---G 68

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
            L+  E+      +G  A+ +S     I   +  ++++P           +E +H+ ++ 
Sbjct: 69  ELSAREKNAYDAIIGLLATLDSPQTRFIY-NVAEYITDPAAHANAAIIGQQEVIHNESYS 127

Query: 133 YIITSLG--LDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRS 189
           Y++ S+    ++  +F + R  P+I  +    +Q Y   +   +            +   
Sbjct: 128 YVLASITDLANQNRVFEIARTHPTILKRNAPIMQAYDDFMREKTAETLLYSLIQSSILEG 187

Query: 190 LRFL 193
           + F 
Sbjct: 188 INFY 191


>gi|4389292|pdb|1BIQ|B Chain B, Ribonucleoside-Diphosphate Reductase 1 Beta Chain Mutant
           E238a
 gi|40889714|pdb|1RSV|A Chain A, Azide Complex Of The Diferrous E238a Mutant R2 Subunit Of
           Ribonucleotide Reductase
 gi|40889715|pdb|1RSV|B Chain B, Azide Complex Of The Diferrous E238a Mutant R2 Subunit Of
           Ribonucleotide Reductase
          Length = 375

 Score = 96.5 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 32  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS +F +II ++  D   +F+       I  
Sbjct: 89  RSPNVALLPLISIPELETWVETWAFSETIHSRSFTHIIRNIVNDPSVVFDDIVTNEQIQK 148

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 149 RAEGISSYYDEL 160


>gi|42543295|pdb|1PM2|A Chain A, Crystal Structure Of Manganese Substituted R2-D84e (D84e
           Mutant Of The R2 Subunit Of E. Coli Ribonucleotide
           Reductase)
 gi|42543296|pdb|1PM2|B Chain B, Crystal Structure Of Manganese Substituted R2-D84e (D84e
           Mutant Of The R2 Subunit Of E. Coli Ribonucleotide
           Reductase)
          Length = 339

 Score = 96.5 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    ES+  
Sbjct: 32  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLESIQG 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 89  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 148

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 149 RAEGISSYYDEL 160


>gi|40889712|pdb|1RSR|A Chain A, Azide Complex Of The Diferrous F208a Mutant R2 Subunit Of
           Ribonucleotide Reductase
 gi|40889713|pdb|1RSR|B Chain B, Azide Complex Of The Diferrous F208a Mutant R2 Subunit Of
           Ribonucleotide Reductase
          Length = 375

 Score = 96.5 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 32  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS +F +II ++  D   +F+       I  
Sbjct: 89  RSPNVALLPLISIPELETWVETWAFSETIHSRSFTHIIRNIVNDPSVVFDDIVTNEQIQK 148

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 149 RAEGISSYYDEL 160


>gi|261867684|ref|YP_003255606.1| ribonucleotide-diphosphate reductase subunit beta [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261413016|gb|ACX82387.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 376

 Score = 96.5 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 60/159 (37%), Gaps = 3/159 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + +        +V +    KY    +      +  W P EV +  D   +     L
Sbjct: 10  KNDQLKEPMFFGQNVNVARYDQQKYETFEKLIEKQLSFFWRPEEVDVSQDRIDYA---AL 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            + E+ +   NL +    +S+   +  +A+   +S PE   ++    F E +HS ++ +I
Sbjct: 67  PEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPELETWIETWTFSETIHSRSYTHI 126

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
           I ++  D   +F+       I  +A     Y   L   S
Sbjct: 127 IRNIVNDPSIVFDDIVTNEEIIKRARDISSYYDDLIRDS 165


>gi|251792451|ref|YP_003007177.1| ribonucleotide-diphosphate reductase subunit beta [Aggregatibacter
           aphrophilus NJ8700]
 gi|315634378|ref|ZP_07889665.1| ribonucleotide-diphosphate reductase beta subunit [Aggregatibacter
           segnis ATCC 33393]
 gi|247533844|gb|ACS97090.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           aphrophilus NJ8700]
 gi|315476968|gb|EFU67713.1| ribonucleotide-diphosphate reductase beta subunit [Aggregatibacter
           segnis ATCC 33393]
          Length = 376

 Score = 96.5 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 60/159 (37%), Gaps = 3/159 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + +        +V +    KY    +      +  W P EV +  D   +     L
Sbjct: 10  KNDQLKEPMFFGQNVNVARYDQQKYETFEKLIEKQLSFFWRPEEVDVSQDRIDYA---AL 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            + E+ +   NL +    +S+   +  +A+   +S PE   ++    F E +HS ++ +I
Sbjct: 67  PEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPELETWIETWTFSETIHSRSYTHI 126

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
           I ++  D   +F+       I  +A     Y   L   S
Sbjct: 127 IRNIVNDPSIVFDDIVTNEEIIKRARDISSYYDDLIRDS 165


>gi|52425023|ref|YP_088160.1| ribonucleotide-diphosphate reductase subunit beta [Mannheimia
           succiniciproducens MBEL55E]
 gi|52307075|gb|AAU37575.1| NrdF protein [Mannheimia succiniciproducens MBEL55E]
          Length = 376

 Score = 96.5 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 61/159 (38%), Gaps = 3/159 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + +        +V++    KY    +      +  W P EV +  D   +     L
Sbjct: 10  KNDQLKEPMFFGQNVNVSRYDQQKYETFEKLIEKQLSFFWRPEEVDVAQDRIDYA---AL 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            + E+ +   NL +    +S+   +  +A+   +S PE   ++    F E +HS ++ +I
Sbjct: 67  PEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPELETWIETWTFSETIHSRSYTHI 126

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
           I ++  D   +F+       I  +A     Y   L   S
Sbjct: 127 IRNIVNDPSVVFDDIVTNEEIIKRAKDISAYYDDLIRDS 165


>gi|326782458|ref|YP_004322858.1| ribonucleotide reductase A subunit [Synechococcus phage S-ShM2]
 gi|310003406|gb|ADO97803.1| ribonucleotide reductase A subunit [Synechococcus phage S-ShM2]
          Length = 386

 Score = 96.5 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 60/146 (41%), Gaps = 4/146 (2%)

Query: 14  EKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
           +++VN   + M   +   V +    KY              W P EV +Q D A +    
Sbjct: 16  KEKVNTKKQPMFFGQPLGVQRYDTFKYPIFDRLTQQQLGYFWRPEEVSLQKDRADYAQ-- 73

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
            LT ++R +   NL +    +S+      +A   + S PE    +    F E +HS ++ 
Sbjct: 74  -LTPEQRHIFTSNLKYQIMLDSVQGRGPGMAFIPYCSLPELEACMNVWEFMEMIHSRSYT 132

Query: 133 YIITSLGLDEGELFNMYREVPSITAK 158
           YII ++  +  ++F+   +   I  +
Sbjct: 133 YIIKNVYSNPEDVFDTILDDEKIIDR 158


>gi|71901120|ref|ZP_00683227.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Ann-1]
 gi|182681036|ref|YP_001829196.1| ribonucleotide-diphosphate reductase subunit beta [Xylella
           fastidiosa M23]
 gi|71729125|gb|EAO31249.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Ann-1]
 gi|182631146|gb|ACB91922.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa M23]
 gi|307579504|gb|ADN63473.1| ribonucleotide-diphosphate reductase subunit beta [Xylella
           fastidiosa subsp. fastidiosa GB514]
          Length = 349

 Score = 96.5 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 69/184 (37%), Gaps = 8/184 (4%)

Query: 14  EKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
           E R       ++N ++  +     + Y   +  Y     N W+P EV M+ D   +    
Sbjct: 15  EPRNPNRSTGIINGKTSGILNWNDIPYPSFYRAYKELSTNFWIPDEVDMKIDKRQY---G 71

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
            L+  E+      +G  A+ +S     I   +  ++++P           +E +H+ ++ 
Sbjct: 72  ELSAREKNAYDAIIGLLATLDSPQTRFIY-NVAEYITDPAAHANAAIIGQQEVIHNESYS 130

Query: 133 YIITSLG--LDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRS 189
           Y++ S+    ++  +F + R  P+I  +    +Q Y   +   +            +   
Sbjct: 131 YVLASITDLANQNRVFEIARTHPTILKRNAPIMQAYDDFMREKTAETLLYSLIQSSILEG 190

Query: 190 LRFL 193
           + F 
Sbjct: 191 INFY 194


>gi|326784150|ref|YP_004324543.1| ribonucleotide reductase A subunit [Prochlorococcus phage Syn1]
 gi|310004882|gb|ADO99273.1| ribonucleotide reductase A subunit [Prochlorococcus phage Syn1]
          Length = 395

 Score = 96.5 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 52/150 (34%), Gaps = 3/150 (2%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           +                    V +    KY    +         W P EV +Q D A ++
Sbjct: 22  VFNKNIVDTTKQHMFFGPPLGVQRYDNFKYPVFDKLTQQQLGYFWRPEEVSLQKDRADYQ 81

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
               L  +++ +   NL +    +S+      +A   + S PE    +      E VHS 
Sbjct: 82  Q---LRPEQKHIFTSNLKYQIMLDSVQGRGPGMAFMPYCSLPELESAMNIWQTMEMVHSR 138

Query: 130 TFQYIITSLGLDEGELFNMYREVPSITAKA 159
           ++ +II ++  D   +F+       I  +A
Sbjct: 139 SYTHIIKNIYPDPSVVFDAIITDEKILERA 168


>gi|157961884|ref|YP_001501918.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           pealeana ATCC 700345]
 gi|157846884|gb|ABV87383.1| Ribonucleoside-diphosphate reductase [Shewanella pealeana ATCC
           700345]
          Length = 376

 Score = 96.5 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   +     L + E+ +   NL +    +S+  
Sbjct: 33  KYEVFEKLIEKQLSFFWRPEEVDVSRDKIDYA---ALPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A    +S PE   ++   +F E +HS ++ +II ++  D   +FN   E   I  
Sbjct: 90  RSPNVAFLPLVSLPELETWIETWSFSETIHSRSYTHIIRNIVNDPSIVFNDIVENEEILK 149

Query: 158 KANWALQYTQTL 169
           +A+    Y   L
Sbjct: 150 RASDIANYYDHL 161


>gi|330433426|gb|AEC18485.1| ribonucleotide-diphosphate reductase subunit beta [Gallibacterium
           anatis UMN179]
          Length = 376

 Score = 96.5 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 63/163 (38%), Gaps = 3/163 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
            +  K   + +        +V +    KY    +      +  W P EV +  D   ++S
Sbjct: 6   FSQHKNDQLKEPMFFGQNVNVARYDQQKYETFEKLIEKQLSFFWRPEEVDVSQDRIDYQS 65

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              L + E+ +   NL +    +S+   +  +A+   +S PE   ++    F E +HS +
Sbjct: 66  ---LPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPELETWIETWTFSETIHSRS 122

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
           + +II ++  D   +F+       I  +A     Y   L   S
Sbjct: 123 YTHIIRNIVNDPSIVFDDIVTNQEIIKRARDISAYYDDLIRDS 165


>gi|71276518|ref|ZP_00652793.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Dixon]
 gi|71900741|ref|ZP_00682863.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Ann-1]
 gi|170729741|ref|YP_001775174.1| ribonucleotide-diphosphate reductase subunit beta [Xylella
           fastidiosa M12]
 gi|71162695|gb|EAO12422.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Dixon]
 gi|71729511|gb|EAO31620.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa Ann-1]
 gi|167964534|gb|ACA11544.1| Ribonucleoside-diphosphate reductase [Xylella fastidiosa M12]
          Length = 349

 Score = 96.5 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 69/184 (37%), Gaps = 8/184 (4%)

Query: 14  EKRVNVDDKRMLNARSD-VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
           E R       ++N ++  +     + Y   +  Y     N W+P EV M+ D   +    
Sbjct: 15  EPRNPNRSTGIINGKTSGILNWNDIPYPSFYRAYKELSTNFWIPDEVDMKIDKRQY---G 71

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
            L+  E+      +G  A+ +S     I   +  ++++P           +E +H+ ++ 
Sbjct: 72  ELSAREKNAYDAIIGLLATLDSPQTRFIY-NVAEYITDPAAHANAAIIGQQEVIHNESYS 130

Query: 133 YIITSLG--LDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRS 189
           Y++ S+    ++  +F + R  P+I  +    +Q Y   +   +            +   
Sbjct: 131 YVLASITDLANQNRVFEIARTHPTILKRNAPIMQAYDDFMREKTAETLLYSLIQSSILEG 190

Query: 190 LRFL 193
           + F 
Sbjct: 191 INFY 194


>gi|322832009|ref|YP_004212036.1| Ribonucleoside-diphosphate reductase [Rahnella sp. Y9602]
 gi|321167210|gb|ADW72909.1| Ribonucleoside-diphosphate reductase [Rahnella sp. Y9602]
          Length = 376

 Score = 96.5 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 62/155 (40%), Gaps = 3/155 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + +        +V +    K+    +      +  W P E+ +  D   ++    L
Sbjct: 10  KNDQLLEPMFFGQSVNVARFDQQKHEIFEKLIEKQLSFFWRPEEIDVSRDRIDFQ---AL 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            D E+ +   NL +    +S+   +  +A+   +S PE   ++   AF E +HS ++ +I
Sbjct: 67  PDHEKHIFLSNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHI 126

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           I ++  D   +F+       I  +A     Y  TL
Sbjct: 127 IRNIVNDPAIVFDDIVTNEEILKRAKDISGYYDTL 161


>gi|91775577|ref|YP_545333.1| ribonucleotide-diphosphate reductase subunit beta [Methylobacillus
           flagellatus KT]
 gi|91709564|gb|ABE49492.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Methylobacillus flagellatus KT]
          Length = 377

 Score = 96.5 bits (239), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 59/132 (44%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++   GL + E+ +   NL +    +S+  
Sbjct: 33  KYPVFEKLIEKQLSFFWRPEEVDVSQDRIDYQ---GLPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+      +I A
Sbjct: 90  RSPNVALLPLVSLPELETWVETWAFSETIHSRSYTHIIRNIVSDPALIFDDIVRNENIVA 149

Query: 158 KANWALQYTQTL 169
           +A+    Y   L
Sbjct: 150 RASDISAYYDDL 161


>gi|326782198|ref|YP_004322599.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-HM1]
 gi|310004405|gb|ADO98798.1| ribonucleotide reductase A subunit [Prochlorococcus phage P-HM1]
          Length = 395

 Score = 96.1 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 3/124 (2%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
            KY    +         W P EV +Q D + +K+   LT +++ +   NL +    +S+ 
Sbjct: 49  FKYPVFDKLTTQQLGYFWRPEEVSLQKDRSDYKT---LTPEQKHIYTSNLKYQIMLDSVQ 105

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSIT 156
                +A   + S PE    +      E +HS ++ YII ++  D  E+F+   +   I 
Sbjct: 106 GRGPGMAFMPYCSLPELESAMNVWQLMEMIHSRSYTYIIKNVYPDASEVFDTVLDDDKIM 165

Query: 157 AKAN 160
           ++A 
Sbjct: 166 SRAE 169


>gi|310722637|ref|YP_003969460.1| NrdB aerobic NDP reductase small subunit [Aeromonas phage phiAS5]
 gi|306021480|gb|ADM80014.1| NrdB aerobic NDP reductase small subunit [Aeromonas phage phiAS5]
          Length = 376

 Score = 96.1 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 59/133 (44%), Gaps = 3/133 (2%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +K+    +      +  W P EV +  D+  +   + LT+ E+ +  +NL + +  +S+ 
Sbjct: 31  VKHPVIDKLTEKQLSFFWRPEEVDLSKDMIDF---SRLTEAEQYVFTQNLKYQSLLDSVQ 87

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSIT 156
                L     +S+     ++   +F E +HS ++ +I+ +L ++  E+F+       I 
Sbjct: 88  GRAPNLTFLPMVSDIALETWITTWSFSETIHSRSYTHIMRNLYVNPTEVFDRIMLDEKIM 147

Query: 157 AKANWALQYTQTL 169
            +A    QY   L
Sbjct: 148 KRATAVTQYYDDL 160


>gi|23100542|ref|NP_694009.1| ribonucleotide-diphosphate reductase subunit beta [Oceanobacillus
           iheyensis HTE831]
 gi|22778775|dbj|BAC15043.1| ribonucleoside-diphosphate reductase beta subunit [Oceanobacillus
           iheyensis HTE831]
          Length = 347

 Score = 96.1 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 73/189 (38%), Gaps = 7/189 (3%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
                  +  N   K      S +     + Y   ++ Y     N+W   EV M  D+  
Sbjct: 8   KAKTLEPRNPNKSTKLFGGESSGILNWNDIAYPHWYKMYKRLVGNYWQADEVNMSSDV-- 65

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
            K  + L+ +E+    + +G  ++ ++       L I  + ++P  +  +   A +EAVH
Sbjct: 66  -KQFSTLSKEEQDAYLKIIGLLSTLDAPQTRT-ALLISLYATDPSVQSIMAVIAQQEAVH 123

Query: 128 SHTFQYIITSLGL--DEGELFNMYREVPSITAKANWAL-QYTQTLSSPSFHYWNKRRRSR 184
           + ++ Y+++S+    ++ E F + R    +  +      QY   + +PS     K     
Sbjct: 124 NESYSYVLSSVVSWNEQNEAFQLGRTDELLLKRNEQLTEQYNAFVDNPSMENMLKTLVYT 183

Query: 185 ILTRSLRFL 193
            L   + F 
Sbjct: 184 SLLEGMFFY 192


>gi|332141553|ref|YP_004427291.1| ribonucleotide-diphosphate reductase subunit beta [Alteromonas
           macleodii str. 'Deep ecotype']
 gi|327551575|gb|AEA98293.1| ribonucleotide-diphosphate reductase subunit beta [Alteromonas
           macleodii str. 'Deep ecotype']
          Length = 376

 Score = 96.1 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 56/132 (42%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P EV +  D   ++    LTD E+ +   NL +    +S+  
Sbjct: 33  KHAIFEKLIEKQISFFWRPEEVDVSRDRVDFQK---LTDPEKHIFISNLKYQTLLDSVQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A    +S PE   ++   +F E +HS ++ +I+ +L  D  E+F        I  
Sbjct: 90  RSPNIAFLPIISLPELETWVETWSFFETIHSRSYTHILRNLFSDPSEIFEDIVVNDEIKR 149

Query: 158 KANWALQYTQTL 169
           +A    +Y   L
Sbjct: 150 RAADISKYYDDL 161


>gi|330004285|ref|ZP_08304843.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           MS 92-3]
 gi|328536657|gb|EGF62979.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           MS 92-3]
          Length = 380

 Score = 96.1 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 53/122 (43%), Gaps = 2/122 (1%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   + +K  L D ER +   NL +    +S+  
Sbjct: 33  KYREFEKLIEKQLSFFWRPEEVDISQDRIDYMTK--LADHERHIFNSNLRYQTLLDSVQG 90

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  + +    S PE   ++   AF E +HS ++ +II  +  D  E+F+       I +
Sbjct: 91  RSPNVTLLPLASIPELETWIETWAFSETIHSRSYTHIIRGMVDDPSEIFDGIVTDEQIIS 150

Query: 158 KA 159
           +A
Sbjct: 151 RA 152


>gi|332174213|gb|AEE23467.1| Ribonucleoside-diphosphate reductase [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 376

 Score = 96.1 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P EV +  D   ++    L++ E+ +   NL +    +S+  
Sbjct: 33  KHSIFEKLIEKQISFFWRPEEVDVSKDRVDFQK---LSESEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A    +S PE   +    +F E +HS ++ +I+ +L  D   +F    E   I  
Sbjct: 90  RSPNIAFLPIISIPELETWTETWSFFETIHSRSYTHILRNLFGDPSSIFADIVENEQIKK 149

Query: 158 KANWALQYTQTL 169
           +A    +Y   L
Sbjct: 150 RAADISKYYDDL 161


>gi|239993885|ref|ZP_04714409.1| ribonucleotide-diphosphate reductase subunit beta [Alteromonas
           macleodii ATCC 27126]
          Length = 376

 Score = 96.1 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 56/132 (42%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P EV +  D   ++    LTD E+ +   NL +    +S+  
Sbjct: 33  KHAIFEKLIEKQISFFWRPEEVDVSRDRVDFQK---LTDPEKHIFISNLKYQTLLDSVQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A    +S PE   ++   +F E +HS ++ +I+ +L  D  E+F        I  
Sbjct: 90  RSPNIAFLPIISLPELETWVETWSFFETIHSRSYTHILRNLFSDPSEIFEDIVVNDEIKR 149

Query: 158 KANWALQYTQTL 169
           +A    +Y   L
Sbjct: 150 RAADISKYYDDL 161


>gi|88859281|ref|ZP_01133921.1| ribonucleotide-diphosphate reductase beta subunit
           [Pseudoalteromonas tunicata D2]
 gi|88818298|gb|EAR28113.1| ribonucleotide-diphosphate reductase beta subunit
           [Pseudoalteromonas tunicata D2]
          Length = 376

 Score = 96.1 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 58/132 (43%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P EV +  D   +++   L D E+ +   NL +    +S+  
Sbjct: 33  KHPIFEKLIEKQLSFFWRPEEVDVSKDRVDFEN---LPDHEKHIFLSNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++      +F+   +   I  
Sbjct: 90  RSPNVALLPIVSLPELETWIETWSFSETIHSRSYTHIIRNVTKQPELIFDDIVDNDKIKE 149

Query: 158 KANWALQYTQTL 169
           +A+   +Y   L
Sbjct: 150 RADEVTRYYDDL 161


>gi|325268103|ref|ZP_08134749.1| ribonucleotide-diphosphate reductase beta subunit [Kingella
           denitrificans ATCC 33394]
 gi|324980488|gb|EGC16154.1| ribonucleotide-diphosphate reductase beta subunit [Kingella
           denitrificans ATCC 33394]
          Length = 384

 Score = 96.1 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 54/132 (40%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY           +  W P EV +  D   + +   L + E+ +   NL +    +S+  
Sbjct: 40  KYIAFENLIEKQISFFWRPEEVDLSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQG 96

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +     +S PE   ++   AF E +HS ++ +II ++  D   +F+   +   I A
Sbjct: 97  RSPNVGFLPLVSIPELETWIETWAFFETIHSRSYTHIIRNIVNDPSVVFDDIVQNEYILA 156

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 157 RAEDIACYYDDL 168


>gi|3891570|pdb|2AV8|A Chain A, Y122f Mutant Of Ribonucleotide Reductase From Escherichia
           Coli
 gi|3891571|pdb|2AV8|B Chain B, Y122f Mutant Of Ribonucleotide Reductase From Escherichia
           Coli
          Length = 340

 Score = 96.1 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 32  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS +F +II ++  D   +F+       I  
Sbjct: 89  RSPNVALLPLISIPELETWVETWAFSETIHSRSFTHIIRNIVNDPSVVFDDIVTNEQIQK 148

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 149 RAEGISSYYDEL 160


>gi|188533366|ref|YP_001907163.1| ribonucleotide-diphosphate reductase subunit beta [Erwinia
           tasmaniensis Et1/99]
 gi|188028408|emb|CAO96269.1| Ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           tasmaniensis Et1/99]
          Length = 376

 Score = 96.1 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 62/155 (40%), Gaps = 3/155 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + +        +V +    KY    +      +  W P EV +  D   ++    L
Sbjct: 10  KNDQLLEPMFFGQPVNVARFDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---AL 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            D E+ +   NL +    +S+   +  +A+   +S PE   ++   AF E +HS ++ +I
Sbjct: 67  PDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWIETWAFSETIHSRSYTHI 126

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           I ++  D   +F+       I ++A     Y   L
Sbjct: 127 IRNIVNDPALVFDDIVTNEQILSRAKDISGYYDDL 161


>gi|255928974|ref|YP_003097286.1| ribonucleotide reductase B subunit [Synechococcus phage S-RSM4]
 gi|255705260|emb|CAR63249.1| ribonucleotide reductase B subunit [Synechococcus phage S-RSM4]
          Length = 394

 Score = 96.1 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 58/151 (38%), Gaps = 3/151 (1%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           +    +  +   K        V +    KY    +         W P EV +Q D A ++
Sbjct: 21  VFNTTQLDSTKQKMFFGPPLGVQRYDKFKYPVFDKLTQQQLGYFWRPEEVSLQKDRADYQ 80

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
               L D ++ +   NL +    +S+      +A   + S PE    +      E VHS 
Sbjct: 81  ---VLNDAQKHIFTSNLKYQILLDSVQGRGPGMAFMPYCSLPELEGAMNIWQTMEMVHSR 137

Query: 130 TFQYIITSLGLDEGELFNMYREVPSITAKAN 160
           ++ +II ++  D  ++F+   +   I ++A 
Sbjct: 138 SYTHIIKNVYADPSDVFDKILDDEKILSRAK 168


>gi|148825799|ref|YP_001290552.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae PittEE]
 gi|148715959|gb|ABQ98169.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           influenzae PittEE]
          Length = 376

 Score = 96.1 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 61/163 (37%), Gaps = 3/163 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + +        +V +    KY    +      +  W P EV +  D   +     L
Sbjct: 10  KNDQLKEPMFFGQNVNVARYDQQKYETFEKLIEKQLSFSWRPEEVDVSQDRIDYA---AL 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            + E+ +   NL +    +S+   +  +A+   +S PE   ++    F E +HS ++ +I
Sbjct: 67  PEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPELETWIETWTFSETIHSRSYTHI 126

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYW 177
           I ++  D   +F+       I  +A     Y   L   S  Y 
Sbjct: 127 IRNIVNDPSIVFDDIVTNEEIIKRAQDISSYYDDLIRDSQLYG 169


>gi|117920413|ref|YP_869605.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella sp.
           ANA-3]
 gi|117612745|gb|ABK48199.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella sp. ANA-3]
          Length = 391

 Score = 96.1 bits (238), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   +   N L D E+ +   NL +    +S+  
Sbjct: 48  KYEVFEKLIEKQLSFFWRPEEVDVSRDKIDY---NSLPDHEKHIFISNLKYQTLLDSIQG 104

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A    +S PE   ++   +F E +HS ++ +II ++  D   +F+       I  
Sbjct: 105 RSPNVAFLPLVSLPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVIFDDIVVNQEILR 164

Query: 158 KANWALQYTQTL 169
           +A    +Y   L
Sbjct: 165 RATDIAEYYDHL 176


>gi|326783875|ref|YP_004324269.1| ribonucleotide reductase A subunit [Synechococcus phage S-SSM7]
 gi|310003887|gb|ADO98282.1| ribonucleotide reductase A subunit [Synechococcus phage S-SSM7]
          Length = 388

 Score = 95.7 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 3/140 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +         W P EV +Q D + ++S   L  +++ +   NL +    +S+  
Sbjct: 43  KYPVFDKLTTQMLGYFWRPEEVSLQKDRSDYQS---LRPEQKHIFTSNLKYQILLDSVQG 99

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
               +A   + + PE    +    F E +HS ++ YII ++  +  E+F+   +   I  
Sbjct: 100 RGPGMAFAPYCALPELEGAMNVWQFMEMIHSRSYTYIIKNVYPNPAEVFDTILDDEKILK 159

Query: 158 KANWALQYTQTLSSPSFHYW 177
           +AN          + +  Y 
Sbjct: 160 RANSVTASYDDFINDAQEYG 179


>gi|91793308|ref|YP_562959.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           denitrificans OS217]
 gi|91715310|gb|ABE55236.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella denitrificans OS217]
          Length = 376

 Score = 95.7 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 54/132 (40%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   +     L + E+ +   NL +    +S+  
Sbjct: 33  KYDIFEKLIEKQLSFFWRPEEVDVSRDKIDF---TALPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A    +S PE   ++   +F E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVAFLPLVSLPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVIFDDIVVNDEILK 149

Query: 158 KANWALQYTQTL 169
           +A    +Y   L
Sbjct: 150 RAGDIAKYYDDL 161


>gi|113970253|ref|YP_734046.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella sp.
           MR-4]
 gi|114047558|ref|YP_738108.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella sp.
           MR-7]
 gi|113884937|gb|ABI38989.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella sp. MR-4]
 gi|113889000|gb|ABI43051.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella sp. MR-7]
          Length = 376

 Score = 95.7 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   +   N L D E+ +   NL +    +S+  
Sbjct: 33  KYEVFEKLIEKQLSFFWRPEEVDVSRDKIDY---NSLPDHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A    +S PE   ++   +F E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVAFLPLVSLPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVIFDDIVVNQEILR 149

Query: 158 KANWALQYTQTL 169
           +A    +Y   L
Sbjct: 150 RATDIAEYYDHL 161


>gi|319638203|ref|ZP_07992966.1| ribonucleoside diphosphate reductase subunit I beta [Neisseria
           mucosa C102]
 gi|317400476|gb|EFV81134.1| ribonucleoside diphosphate reductase subunit I beta [Neisseria
           mucosa C102]
          Length = 384

 Score = 95.7 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 56/132 (42%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P E+ +  D   + +   L + E+ +   NL +    +S+  
Sbjct: 40  KYEVFEKLIEKQLSFFWRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQG 96

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A    +S PE   ++   +F E +HS ++ +II ++  D   +F+   +   I A
Sbjct: 97  RSPNVAFLPLVSIPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVQNKYIIA 156

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 157 RAEDIACYYDDL 168


>gi|241760495|ref|ZP_04758588.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           flavescens SK114]
 gi|241318999|gb|EER55501.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           flavescens SK114]
          Length = 377

 Score = 95.7 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 56/132 (42%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P E+ +  D   + +   L + E+ +   NL +    +S+  
Sbjct: 33  KYEVFEKLIEKQLSFFWRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A    +S PE   ++   +F E +HS ++ +II ++  D   +F+   +   I A
Sbjct: 90  RSPNVAFLPLVSIPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVQNKYIIA 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAEDIACYYDDL 161


>gi|326783480|ref|YP_004324017.1| ribonucleotide reductase A subunit [Synechococcus phage Syn19]
 gi|310004983|gb|ADO99373.1| ribonucleotide reductase A subunit [Synechococcus phage Syn19]
          Length = 388

 Score = 95.7 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 62/150 (41%), Gaps = 3/150 (2%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           +    K    +          V +    KY    +         W P EV +Q D + ++
Sbjct: 15  VFNKTKVDTKNQPMFFGQPLGVQRYDEYKYPVFDKLTQQQLGYFWRPEEVSLQKDRSDYQ 74

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
           +   L++ ++ +   NL +    +S+      +A   + S PE    +    F E +HS 
Sbjct: 75  T---LSEQQKHIFTSNLKYQIMLDSVQGRGPGMAFIPYCSLPELEACMTVWEFMEMIHSR 131

Query: 130 TFQYIITSLGLDEGELFNMYREVPSITAKA 159
           ++ YII ++  + G++F+   +  ++ ++A
Sbjct: 132 SYTYIIKNVYSNPGDVFDTILDDENVMSRA 161


>gi|251790602|ref|YP_003005323.1| ribonucleotide-diphosphate reductase subunit beta [Dickeya zeae
           Ech1591]
 gi|247539223|gb|ACT07844.1| ribonucleotide reductase [Dickeya zeae Ech1591]
          Length = 376

 Score = 95.7 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++   GL + E+ +   NL +    +S+  
Sbjct: 33  KYEIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---GLPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEEILK 149

Query: 158 KANWALQYTQTL 169
           +A     +   L
Sbjct: 150 RAKDISGFYDEL 161


>gi|259907948|ref|YP_002648304.1| ribonucleotide-diphosphate reductase subunit beta [Erwinia
           pyrifoliae Ep1/96]
 gi|224963570|emb|CAX55060.1| Ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           pyrifoliae Ep1/96]
 gi|283477829|emb|CAY73745.1| ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           pyrifoliae DSM 12163]
 gi|310768143|gb|ADP13093.1| ribonucleotide-diphosphate reductase subunit beta [Erwinia sp.
           Ejp617]
          Length = 376

 Score = 95.7 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 62/155 (40%), Gaps = 3/155 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + +        +V +    KY    +      +  W P EV +  D   ++    L
Sbjct: 10  KNDQLLEPMFFGQSVNVARFDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---AL 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            + E+ +   NL +    +S+   +  +A+   +S PE   ++   AF E +HS ++ +I
Sbjct: 67  PEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHI 126

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           I ++  D   +F+       I ++A     Y   L
Sbjct: 127 IRNIVNDPALVFDDIVTNEQILSRAKDISGYYDDL 161


>gi|225075859|ref|ZP_03719058.1| hypothetical protein NEIFLAOT_00882 [Neisseria flavescens
           NRL30031/H210]
 gi|224952805|gb|EEG34014.1| hypothetical protein NEIFLAOT_00882 [Neisseria flavescens
           NRL30031/H210]
          Length = 388

 Score = 95.7 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 56/132 (42%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P E+ +  D   + +   L + E+ +   NL +    +S+  
Sbjct: 44  KYEVFEKLIEKQLSFFWRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQG 100

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A    +S PE   ++   +F E +HS ++ +II ++  D   +F+   +   I A
Sbjct: 101 RSPNVAFLPLVSIPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVQNKYIIA 160

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 161 RAEDIACYYDDL 172


>gi|109898789|ref|YP_662044.1| ribonucleotide-diphosphate reductase subunit beta
           [Pseudoalteromonas atlantica T6c]
 gi|109701070|gb|ABG40990.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Pseudoalteromonas atlantica T6c]
          Length = 376

 Score = 95.7 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 56/132 (42%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P EV +  D   ++    L++ E+ +   NL +    +S+  
Sbjct: 33  KHSIFEKLIEKQISFFWRPEEVDVSKDRVDFQK---LSESEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A    +S PE   +    +F E +HS ++ +I+ +L  D   +F+   E   I  
Sbjct: 90  RSPNIAFLPIISIPELETWTETWSFFETIHSRSYTHILRNLFGDPSSIFSDIVENEQIKK 149

Query: 158 KANWALQYTQTL 169
           +A    +Y   L
Sbjct: 150 RAADISKYYDDL 161


>gi|284799957|ref|ZP_05985309.2| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           subflava NJ9703]
 gi|284796454|gb|EFC51801.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           subflava NJ9703]
          Length = 377

 Score = 95.7 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 56/132 (42%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P E+ +  D   + +   L + E+ +   NL +    +S+  
Sbjct: 33  KYEVFEKLIEKQLSFFWRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A    +S PE   ++   +F E +HS ++ +II ++  D   +F+   +   I A
Sbjct: 90  RSPNVAFLPLVSIPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVQNKYIIA 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAEDIACYYDDL 161


>gi|58532963|ref|YP_195186.1| ribonucleotide reductase A subunit [Synechococcus phage S-PM2]
 gi|58331430|emb|CAF34216.1| ribonucleotide reductase A subunit [Synechococcus phage S-PM2]
          Length = 394

 Score = 95.7 bits (237), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 61/165 (36%), Gaps = 4/165 (2%)

Query: 14  EKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
           + +VN   + M       V +    KY    +         W P EV +Q D A ++   
Sbjct: 24  KNKVNTTKQPMFFGAPLGVQRYDNFKYPVFDKLTQQQLGYFWRPEEVSLQKDRADYQQ-- 81

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
            L  +++ +   NL +    +S+      +A   + S PE    +      E VHS ++ 
Sbjct: 82  -LRPEQKHIFTSNLKYQIMLDSVQGRGPGMAFMPYCSLPELESAMNIWQTMEMVHSRSYT 140

Query: 133 YIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYW 177
           +II ++  D  ++F+       I  +A    +        +  + 
Sbjct: 141 HIIKNIYPDPSDVFDQIISDEKILERATSVTKAYDEFLQAAQEWG 185


>gi|294788520|ref|ZP_06753762.1| ribonucleoside-diphosphate reductase, beta subunit [Simonsiella
           muelleri ATCC 29453]
 gi|294483397|gb|EFG31082.1| ribonucleoside-diphosphate reductase, beta subunit [Simonsiella
           muelleri ATCC 29453]
          Length = 384

 Score = 95.3 bits (236), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 56/132 (42%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   +     L + E+ +   NL +    +S+  
Sbjct: 40  KYEVFEKLIEKQISFFWRPEEVDLSRDRMDYAK---LPEHEKHIFISNLKYQTLLDSIQG 96

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+   +   I A
Sbjct: 97  RSPNVALLPLVSIPELETWIETWAFFETIHSRSYTHIIRNIVNDPSVVFDDIVQNEYIIA 156

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 157 RAEDIACYYNDL 168


>gi|269213593|ref|ZP_05982340.2| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           cinerea ATCC 14685]
 gi|269146056|gb|EEZ72474.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           cinerea ATCC 14685]
          Length = 377

 Score = 95.3 bits (236), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 57/132 (43%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P E+ +  D   + +   L + E+ +   NL +    +S+  
Sbjct: 33  KYEVFEKLIEKQLSFFWRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+   E   I A
Sbjct: 90  RSPNVALLPLVSIPELETWIETWSFSETIHSRSYTHIIRNIVNDPSIVFDDIVENEYIIA 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAEDIACYYDDL 161


>gi|294669615|ref|ZP_06734682.1| hypothetical protein NEIELOOT_01516 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308528|gb|EFE49771.1| hypothetical protein NEIELOOT_01516 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 296

 Score = 95.3 bits (236), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 57/132 (43%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P E+ +  D   + +   L + E+ +   NL +    +S+  
Sbjct: 33  KYEVFEKLIEKQLSFFWRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+   +   I A
Sbjct: 90  RSPNVALLPLVSIPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVQNEYIIA 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAEDIACYYDDL 161


>gi|237808189|ref|YP_002892629.1| ribonucleotide-diphosphate reductase subunit beta [Tolumonas
           auensis DSM 9187]
 gi|237500450|gb|ACQ93043.1| ribonucleotide reductase [Tolumonas auensis DSM 9187]
          Length = 377

 Score = 95.3 bits (236), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 54/132 (40%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY           +  W P EV +  D   +++   L   E+ +   NL +    +S+  
Sbjct: 33  KYEVFERLIEKQLSFFWRPEEVDVSQDRIDYQT---LPPHEQHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLVSLPELETWIETWAFSETIHSRSYTHIIRNIVNDPAVVFDDIVVNEQIIK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAEDIAGYYDEL 161


>gi|119774862|ref|YP_927602.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           amazonensis SB2B]
 gi|119767362|gb|ABL99932.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella amazonensis SB2B]
          Length = 391

 Score = 95.3 bits (236), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 3/122 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           +Y    +      +  W P EV +  D   +     L D ER +   NL +    +S+  
Sbjct: 48  RYEVFEKLIEKQLSFFWRPEEVDVSRDKIDF---GKLPDHERHIFISNLKYQTLLDSIQG 104

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A    +S PE   ++   +F E +HS ++ +II ++  D   +F+       I  
Sbjct: 105 RSPNVAFLPLVSLPELETWIETWSFSETIHSRSYTHIIRNIVNDPSSVFDDIVVNEEILK 164

Query: 158 KA 159
           +A
Sbjct: 165 RA 166


>gi|238920521|ref|YP_002934036.1| ribonucleotide-diphosphate reductase subunit beta [Edwardsiella
           ictaluri 93-146]
 gi|238870090|gb|ACR69801.1| ribonucleoside-diphosphate reductase, beta subunit, putative
           [Edwardsiella ictaluri 93-146]
          Length = 376

 Score = 94.9 bits (235), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 64/160 (40%), Gaps = 3/160 (1%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           I + +K   + +        +V +    K+    +      +  W P EV +  D   ++
Sbjct: 5   IFSQKKNDQLLEPMFFGQPVNVARYDQQKHEIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ 64

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
               L D E+ +   NL +    +S+   +  +A+   +S PE   ++   +F E +HS 
Sbjct: 65  ---ALPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWSFSETIHSR 121

Query: 130 TFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           ++ +II ++  D   +F+       I  +A     Y   L
Sbjct: 122 SYTHIIRNIVTDPSLVFDDIVSNEEILKRARDISAYYDDL 161


>gi|238761950|ref|ZP_04622923.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           kristensenii ATCC 33638]
 gi|238699678|gb|EEP92422.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           kristensenii ATCC 33638]
          Length = 400

 Score = 94.9 bits (235), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P E+ +  D   +   N L D E+ +   NL +    +S+  
Sbjct: 57  KHAIFEKLIEKQLSFFWRPEEIDVSRDRIDY---NALPDHEKHIFISNLKYQTLLDSIQG 113

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+       I  
Sbjct: 114 RSPNVALLPLVSIPELETWIETWSFSETIHSRSYTHIIRNIVNDPSIVFDDIVTNEEILK 173

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 174 RAKDISGYYDDL 185


>gi|269139684|ref|YP_003296385.1| ribonucleotide reductase, beta subunit [Edwardsiella tarda EIB202]
 gi|267985345|gb|ACY85174.1| ribonucleotide reductase, beta subunit [Edwardsiella tarda EIB202]
 gi|304559553|gb|ADM42217.1| Ribonucleotide reductase of class Ia, beta subunit [Edwardsiella
           tarda FL6-60]
          Length = 376

 Score = 94.9 bits (235), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 64/160 (40%), Gaps = 3/160 (1%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           I + +K   + +        +V +    K+    +      +  W P EV +  D   ++
Sbjct: 5   IFSQKKNDQLLEPMFFGQPVNVARYDQQKHEIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ 64

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
               L D E+ +   NL +    +S+   +  +A+   +S PE   ++   +F E +HS 
Sbjct: 65  ---ALPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWSFSETIHSR 121

Query: 130 TFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           ++ +II ++  D   +F+       I  +A     Y   L
Sbjct: 122 SYTHIIRNIVTDPALVFDDIVSNEEILKRARDISAYYDDL 161


>gi|270262779|ref|ZP_06191050.1| ribonucleoside-diphosphate reductase 1 subunit beta [Serratia
           odorifera 4Rx13]
 gi|270043463|gb|EFA16556.1| ribonucleoside-diphosphate reductase 1 subunit beta [Serratia
           odorifera 4Rx13]
          Length = 359

 Score = 94.9 bits (235), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 16  KHEIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 72

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+       I  
Sbjct: 73  RSPNVALLPLISIPELETWVETWSFSETIHSRSYTHIIRNIVNDPALVFDDIVTNEEILK 132

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 133 RAKDISGYYDDL 144


>gi|317492553|ref|ZP_07950980.1| ribonucleotide reductase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316919303|gb|EFV40635.1| ribonucleotide reductase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 376

 Score = 94.9 bits (235), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 33  KHEIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWSFSETIHSRSYTHIIRNIVNDPATVFDDIVTNEEILK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAKDISGYYDDL 161


>gi|331035505|gb|AEC53062.1| ribonucleotide reductase subunit B [Synechococcus phage S-CRM01]
          Length = 381

 Score = 94.9 bits (235), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 68/163 (41%), Gaps = 4/163 (2%)

Query: 17  VNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           V++  + M   +   + Q L  KY    +   +     W P EV +Q D + +++   L 
Sbjct: 14  VDLKQQPMFFGQPLGIQQYLDYKYPLFEKLTQTQLGFFWRPEEVSLQKDRSDYQN---LR 70

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
            +++ +   NL +    +S+      LA   + S PE    +    F E +HS ++ +II
Sbjct: 71  PEQKHIFTSNLKYQVMLDSVQGRGPSLAFLPYCSLPELESCMEVWGFMEMIHSRSYTHII 130

Query: 136 TSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWN 178
            +L     E+F+       I  +A    +   +  + + HY N
Sbjct: 131 KNLYPQPEEVFSTILSDSKIMERAKSVTESYDSFINAAHHYDN 173


>gi|307129979|ref|YP_003881995.1| Ribonucleotide reductase of class Ia (aerobic), subunit beta
           [Dickeya dadantii 3937]
 gi|306527508|gb|ADM97438.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Dickeya dadantii 3937]
          Length = 376

 Score = 94.9 bits (235), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 33  KYEIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEEILK 149

Query: 158 KANWALQYTQTL 169
           +A     +   L
Sbjct: 150 RAKDISGFYDEL 161


>gi|326560494|gb|EGE10876.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis 7169]
 gi|326570427|gb|EGE20467.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis BC8]
 gi|326575699|gb|EGE25622.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis CO72]
 gi|326577166|gb|EGE27060.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis O35E]
          Length = 376

 Score = 94.9 bits (235), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 56/132 (42%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P E+ +  D   +     L+  E+ +   NL +    +S+  
Sbjct: 33  KHPIFEQLIEKQLSFFWRPEEIDVSKDRIDFAE---LSTHEQHIFLSNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  + +   +S PE   ++   +F E +HS ++ +II ++  D  ++F    +   I  
Sbjct: 90  RSPNVVLLPLVSIPELETWIETWSFSETIHSRSYTHIIRNVVNDPSKIFEDIVDNEYILE 149

Query: 158 KANWALQYTQTL 169
           +A+   +Y   L
Sbjct: 150 RASDIAKYYDDL 161


>gi|21959884|gb|AAM86526.1|AE013899_3 ribonucleoside-diphosphate reductase 1, beta subunit, B2 [Yersinia
           pestis KIM 10]
 gi|45435621|gb|AAS61179.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           biovar Microtus str. 91001]
          Length = 391

 Score = 94.9 bits (235), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P E+ +  D   +   N L D E+ +   NL +    +S+  
Sbjct: 48  KHAIFEKLIEKQLSFFWRPEEIDVSRDRIDY---NALPDHEKHIFISNLKYQTLLDSIQG 104

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+       I  
Sbjct: 105 RSPNVALLPLISIPELETWVETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEEILK 164

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 165 RAKDISAYYDDL 176


>gi|298368555|ref|ZP_06979873.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria sp.
           oral taxon 014 str. F0314]
 gi|298282558|gb|EFI24045.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria sp.
           oral taxon 014 str. F0314]
          Length = 384

 Score = 94.9 bits (235), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 57/132 (43%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P E+ +  D   + +   L + E+ +   NL +    +S+  
Sbjct: 40  KYEVFEKLIEKQLSFFWRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQG 96

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+   +   I A
Sbjct: 97  RSPNVALLPLVSIPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVQNEYIIA 156

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 157 RAEDIACYYDDL 168


>gi|61680624|pdb|1YFD|A Chain A, Crystal Structure Of The Y122h Mutant Of Ribonucleotide
           Reductase R2 Protein From E. Coli
 gi|61680625|pdb|1YFD|B Chain B, Crystal Structure Of The Y122h Mutant Of Ribonucleotide
           Reductase R2 Protein From E. Coli
          Length = 375

 Score = 94.9 bits (235), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 54/132 (40%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 32  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS +  +II ++  D   +F+       I  
Sbjct: 89  RSPNVALLPLISIPELETWVETWAFSETIHSRSHTHIIRNIVNDPSVVFDDIVTNEQIQK 148

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 149 RAEGISSYYDEL 160


>gi|296113118|ref|YP_003627056.1| ribonucleoside-diphosphate reductase 1 subunit beta [Moraxella
           catarrhalis RH4]
 gi|295920812|gb|ADG61163.1| ribonucleoside-diphosphate reductase 1 subunit beta [Moraxella
           catarrhalis RH4]
          Length = 380

 Score = 94.9 bits (235), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 56/132 (42%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P E+ +  D   +     L+  E+ +   NL +    +S+  
Sbjct: 37  KHPIFEQLIEKQLSFFWRPEEIDVSKDRIDFAE---LSTHEQHIFLSNLKYQTLLDSIQG 93

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  + +   +S PE   ++   +F E +HS ++ +II ++  D  ++F    +   I  
Sbjct: 94  RSPNVVLLPLVSIPELETWIETWSFSETIHSRSYTHIIRNVVNDPSKIFEDIVDNEYILE 153

Query: 158 KANWALQYTQTL 169
           +A+   +Y   L
Sbjct: 154 RASDIAKYYDDL 165


>gi|212635281|ref|YP_002311806.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           piezotolerans WP3]
 gi|212556765|gb|ACJ29219.1| Ribonucleoside-diphosphate reductase, beta subunit [Shewanella
           piezotolerans WP3]
          Length = 376

 Score = 94.9 bits (235), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 54/132 (40%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   + S   L   E+ +   NL +    +S+  
Sbjct: 33  KYEVFEKLIEKQLSFFWRPEEVDVSKDKIDYAS---LPAHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A    +S PE   ++   +F E +HS ++ +II ++  D   +F+   E   I  
Sbjct: 90  RSPNVAFLPLVSLPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEEILK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RATDIAAYYDKL 161


>gi|157371509|ref|YP_001479498.1| ribonucleotide-diphosphate reductase subunit beta [Serratia
           proteamaculans 568]
 gi|157323273|gb|ABV42370.1| Ribonucleoside-diphosphate reductase [Serratia proteamaculans 568]
          Length = 376

 Score = 94.9 bits (235), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 33  KHEIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWIETWSFSETIHSRSYTHIIRNIVNDPAIVFDDIVTNEEILK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAKDISGYYDDL 161


>gi|293392273|ref|ZP_06636607.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290952807|gb|EFE02926.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 376

 Score = 94.9 bits (235), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 60/159 (37%), Gaps = 3/159 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + +        +V +    KY    +      +  W P EV +  D   +     L
Sbjct: 10  KNDQLKEPMFFGQNVNVARYDQQKYETFEKLIEKQLSFFWRPEEVDVSQDRIDYA---AL 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            + E+ +   NL +    +S+   +  +A+   +S PE   ++    F E +HS ++ +I
Sbjct: 67  PEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPELETWIETWTFSETIHSRSYTHI 126

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
           I ++  +   +F+       I  +A     Y   L   S
Sbjct: 127 IRNIVNNPSIVFDDIVTNEEIIKRARDISSYYDDLIRDS 165


>gi|326560111|gb|EGE10501.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis 46P47B1]
 gi|326564174|gb|EGE14410.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis 12P80B1]
 gi|326573404|gb|EGE23372.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis 101P30B1]
          Length = 376

 Score = 94.9 bits (235), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 56/132 (42%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P E+ +  D   +     L+  E+ +   NL +    +S+  
Sbjct: 33  KHPIFEQLIEKQLSFFWRPEEIDVSKDRIDFAE---LSTHEQHIFLSNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  + +   +S PE   ++   +F E +HS ++ +II ++  D  ++F    +   I  
Sbjct: 90  RSPNVVLLPLVSIPELETWIETWSFSETIHSRSYTHIIRNVVNDPSKIFEDIVDNEYILE 149

Query: 158 KANWALQYTQTL 169
           +A+   +Y   L
Sbjct: 150 RASDIAKYYDDL 161


>gi|161617990|ref|YP_001595470.1| ribonucleotide reductase beta subunit [Enterobacteria phage
           phiEcoM-GJ1]
 gi|150416409|gb|ABR68787.1| ribonucleotide reductase beta subunit [Enterobacteria phage
           phiEcoM-GJ1]
          Length = 372

 Score = 94.9 bits (235), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 62/159 (38%), Gaps = 3/159 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
            +  K   + +        +V +    KYG   +      +  W P EV +  D   ++ 
Sbjct: 6   FSQTKNNQLLEPMFFGQNVNVARYDQQKYGIFEKLIEKQLSFFWRPEEVDVSQDRIDYQK 65

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              L  +E+ +   NL +    +S+        +   +S PE   ++   +F E +HS +
Sbjct: 66  ---LPANEQHIFTSNLRYQILLDSIQGRGPNTVLLPIVSIPELETWIETWSFSETIHSRS 122

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           + +II ++  D   +F+       I A+A    QY   L
Sbjct: 123 YTHIIRNIVTDPSIIFDEIVTNEHIKARAIGISQYYDEL 161


>gi|255065945|ref|ZP_05317800.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria sicca
           ATCC 29256]
 gi|255049856|gb|EET45320.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria sicca
           ATCC 29256]
          Length = 377

 Score = 94.5 bits (234), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 57/132 (43%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P E+ +  D   + +   L + E+ +   NL +    +S+  
Sbjct: 33  KYEVFEKLIEKQLSFFWRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+   +   I A
Sbjct: 90  RSPNVALLPLVSIPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVQNEYIIA 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAEDIACYYDDL 161


>gi|261364564|ref|ZP_05977447.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           mucosa ATCC 25996]
 gi|288567131|gb|EFC88691.1| ribonucleoside-diphosphate reductase, beta subunit [Neisseria
           mucosa ATCC 25996]
          Length = 384

 Score = 94.5 bits (234), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 57/132 (43%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P E+ +  D   + +   L + E+ +   NL +    +S+  
Sbjct: 40  KYEVFEKLIEKQLSFFWRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQG 96

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+   +   I A
Sbjct: 97  RSPNVALLPLVSIPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVQNEYIIA 156

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 157 RAEDIACYYDDL 168


>gi|292488819|ref|YP_003531706.1| ribonucleoside-diphosphate reductase 1 subunit beta [Erwinia
           amylovora CFBP1430]
 gi|292899970|ref|YP_003539339.1| ribonucleoside-diphosphate reductase 1 subunit beta [Erwinia
           amylovora ATCC 49946]
 gi|291199818|emb|CBJ46941.1| ribonucleoside-diphosphate reductase 1 beta subunit [Erwinia
           amylovora ATCC 49946]
 gi|291554253|emb|CBA21550.1| ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           amylovora CFBP1430]
 gi|312172977|emb|CBX81232.1| ribonucleoside-diphosphate reductase 1 beta chain [Erwinia
           amylovora ATCC BAA-2158]
          Length = 376

 Score = 94.5 bits (234), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 33  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I +
Sbjct: 90  RSPNVALLPLISIPELETWIETWAFSETIHSRSYTHIIRNIVNDPALVFDDIVTNEQILS 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAKDISGYYDDL 161


>gi|51595597|ref|YP_069788.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           pseudotuberculosis IP 32953]
 gi|108806924|ref|YP_650840.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Antiqua]
 gi|108812924|ref|YP_648691.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Nepal516]
 gi|145599749|ref|YP_001163825.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Pestoides F]
 gi|149366796|ref|ZP_01888830.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           CA88-4125]
 gi|153950490|ref|YP_001401734.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           pseudotuberculosis IP 31758]
 gi|161484771|ref|NP_670275.2| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           KIM 10]
 gi|161511422|ref|NP_992302.2| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           biovar Microtus str. 91001]
 gi|162418296|ref|YP_001605847.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Angola]
 gi|165924721|ref|ZP_02220553.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165938305|ref|ZP_02226863.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166009974|ref|ZP_02230872.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166211802|ref|ZP_02237837.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167400353|ref|ZP_02305866.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167419574|ref|ZP_02311327.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167424117|ref|ZP_02315870.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|167470792|ref|ZP_02335496.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           FV-1]
 gi|170025073|ref|YP_001721578.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           pseudotuberculosis YPIII]
 gi|186894660|ref|YP_001871772.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           pseudotuberculosis PB1/+]
 gi|218928372|ref|YP_002346247.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           CO92]
 gi|229841157|ref|ZP_04461316.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229843262|ref|ZP_04463408.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229894122|ref|ZP_04509308.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           Pestoides A]
 gi|229903354|ref|ZP_04518467.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           Nepal516]
 gi|270487164|ref|ZP_06204238.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           KIM D27]
 gi|294503227|ref|YP_003567289.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
           Z176003]
 gi|51588879|emb|CAH20493.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia
           pseudotuberculosis IP 32953]
 gi|108776572|gb|ABG19091.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Yersinia pestis Nepal516]
 gi|108778837|gb|ABG12895.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Yersinia pestis Antiqua]
 gi|115346983|emb|CAL19874.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           CO92]
 gi|145211445|gb|ABP40852.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Yersinia pestis Pestoides F]
 gi|149291170|gb|EDM41245.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           CA88-4125]
 gi|152961985|gb|ABS49446.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia
           pseudotuberculosis IP 31758]
 gi|162351111|gb|ABX85059.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           Angola]
 gi|165913683|gb|EDR32302.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165923781|gb|EDR40913.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165991370|gb|EDR43671.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166207573|gb|EDR52053.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166962315|gb|EDR58336.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167050302|gb|EDR61710.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167056966|gb|EDR66729.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|169751607|gb|ACA69125.1| Ribonucleoside-diphosphate reductase [Yersinia pseudotuberculosis
           YPIII]
 gi|186697686|gb|ACC88315.1| ribonucleotide reductase [Yersinia pseudotuberculosis PB1/+]
 gi|229679124|gb|EEO75227.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           Nepal516]
 gi|229689609|gb|EEO81670.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229697523|gb|EEO87570.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229704007|gb|EEO91020.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           Pestoides A]
 gi|262361266|gb|ACY57987.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
           D106004]
 gi|262365197|gb|ACY61754.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
           D182038]
 gi|270335668|gb|EFA46445.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           KIM D27]
 gi|294353686|gb|ADE64027.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
           Z176003]
 gi|320015945|gb|ADV99516.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 376

 Score = 94.5 bits (234), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P E+ +  D   +   N L D E+ +   NL +    +S+  
Sbjct: 33  KHAIFEKLIEKQLSFFWRPEEIDVSRDRIDY---NALPDHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEEILK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAKDISAYYDDL 161


>gi|271499642|ref|YP_003332667.1| ribonucleotide reductase [Dickeya dadantii Ech586]
 gi|270343197|gb|ACZ75962.1| ribonucleotide reductase [Dickeya dadantii Ech586]
          Length = 376

 Score = 94.5 bits (234), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 33  KYEIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSIVFDDIVTNEEILK 149

Query: 158 KANWALQYTQTL 169
           +A     +   L
Sbjct: 150 RAKDISGFYDEL 161


>gi|257454213|ref|ZP_05619483.1| ribonucleoside-diphosphate reductase, beta subunit [Enhydrobacter
           aerosaccus SK60]
 gi|257448386|gb|EEV23359.1| ribonucleoside-diphosphate reductase, beta subunit [Enhydrobacter
           aerosaccus SK60]
          Length = 377

 Score = 94.5 bits (234), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 57/132 (43%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P E+ +  D   +   + L+  E+ +   NL +    +S+  
Sbjct: 33  KFPVFEQLIEKQLSFFWRPEEIDVSKDRLDF---SNLSVHEQHIFLSNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +    +   +S PE   ++   +F E +HS ++ +II ++  D  ++F+   + P I  
Sbjct: 90  RSPNAVLLPLVSIPELETWIETWSFSETIHSRSYTHIIRNVVNDPSKVFDDIVDNPFILE 149

Query: 158 KANWALQYTQTL 169
           +A    ++   L
Sbjct: 150 RATGIAKFYDEL 161


>gi|225023977|ref|ZP_03713169.1| hypothetical protein EIKCOROL_00844 [Eikenella corrodens ATCC
           23834]
 gi|224943002|gb|EEG24211.1| hypothetical protein EIKCOROL_00844 [Eikenella corrodens ATCC
           23834]
          Length = 384

 Score = 94.5 bits (234), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 65/159 (40%), Gaps = 3/159 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
            + EK   + +        +V +    KY    +      +  W P E+ +  D   + +
Sbjct: 13  FSKEKNDVLKEPMFFGQPVNVARYDQQKYEVFEKLIEKQLSFFWRPEEIDVSRDRIDYAN 72

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              L D E+ +   NL +    +S+   +  +A+   +S PE   ++   +F E +HS +
Sbjct: 73  ---LPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPELETWIETWSFSETIHSRS 129

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           + +II ++  D   +F+   +   I A+A     Y   L
Sbjct: 130 YTHIIRNIVNDPSVVFDDIVQNEYIIARAEDIACYYDDL 168


>gi|326565416|gb|EGE15593.1| ribonucleotide-diphosphate reductase subunit beta [Moraxella
           catarrhalis 103P14B1]
          Length = 376

 Score = 94.1 bits (233), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 56/132 (42%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P E+ +  D   +     L+  E+ +   NL +    +S+  
Sbjct: 33  KHPIFEQLIEKQLSFFWRPEEIDVSKDRIDFAE---LSTHEQHIFLSNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  + +   +S PE   ++   +F E +HS ++ +II ++  D  ++F    +   I  
Sbjct: 90  RSPNVVLLPLVSIPELETWIETWSFSETIHSRSYTHIIRNVVNDPSKIFEDIVDNEYILE 149

Query: 158 KANWALQYTQTL 169
           +A+   +Y   L
Sbjct: 150 RASDIAKYYDDL 161


>gi|238785708|ref|ZP_04629683.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           bercovieri ATCC 43970]
 gi|238713393|gb|EEQ05430.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           bercovieri ATCC 43970]
          Length = 376

 Score = 94.1 bits (233), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P E+ +  D   +   N L D E+ +   NL +    +S+  
Sbjct: 33  KHAIFEKLIEKQLSFFWRPEEIDVSRDRIDY---NALPDHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWSFSETIHSRSYTHIIRNIVNDPAIVFDDIVTNEEILK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAKDISAYYDDL 161


>gi|221134587|ref|ZP_03560892.1| ribonucleotide-diphosphate reductase subunit beta [Glaciecola sp.
           HTCC2999]
          Length = 376

 Score = 94.1 bits (233), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 58/132 (43%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P EV +  D   ++   GL+D E+ +   NL +    +S+  
Sbjct: 33  KHAIFEKLIEKQISFFWRPEEVDVSKDRMDFQ---GLSDAEKHIFISNLKYQTLLDSVQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +I+ +L  D   +F    E   I  
Sbjct: 90  RSPNIALLPIVSLPELETWIETWSFFETIHSRSYTHILRNLFTDPSNIFEDIVENEEIKR 149

Query: 158 KANWALQYTQTL 169
           +A    +Y   L
Sbjct: 150 RAADISKYYDDL 161


>gi|94676795|ref|YP_588829.1| ribonucleotide-diphosphate reductase subunit beta [Baumannia
           cicadellinicola str. Hc (Homalodisca coagulata)]
 gi|94219945|gb|ABF14104.1| ribonucleoside-diphosphate reductase, beta subunit [Baumannia
           cicadellinicola str. Hc (Homalodisca coagulata)]
          Length = 376

 Score = 94.1 bits (233), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 63/159 (39%), Gaps = 3/159 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
            + +K   + +   L    +V +    KY    +      +  W P EV +  D   ++ 
Sbjct: 6   FSPKKNNQLLEPMFLGQSVNVVRFDQQKYESFEKLIEKQLSFFWRPEEVDISLDRIDYQ- 64

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              L   E+ +   N+ +    +S+   +  +A+   +S PE   ++   AF E +HS +
Sbjct: 65  --ALPQHEKHIFISNIKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRS 122

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           + +II ++  D   +F+       I  +A     +   L
Sbjct: 123 YTHIIRNIVNDPSLVFDDIVTNTEILKRAKDIAAFYDDL 161


>gi|304445703|pdb|2XOF|A Chain A, Ribonucleotide Reductase Y122no2y Modified R2 Subunit Of
           E. Coli
 gi|304445704|pdb|2XOF|B Chain B, Ribonucleotide Reductase Y122no2y Modified R2 Subunit Of
           E. Coli
          Length = 375

 Score = 94.1 bits (233), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 54/132 (40%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 32  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS +  +II ++  D   +F+       I  
Sbjct: 89  RSPNVALLPLISIPELETWVETWAFSETIHSRSXTHIIRNIVNDPSVVFDDIVTNEQIQK 148

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 149 RAEGISSYYDEL 160


>gi|145298925|ref|YP_001141766.1| ribonucleotide-diphosphate reductase subunit beta [Aeromonas
           salmonicida subsp. salmonicida A449]
 gi|142851697|gb|ABO90018.1| ribonucleoside-diphosphate reductase, beta subunit [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 377

 Score = 94.1 bits (233), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 56/136 (41%), Gaps = 3/136 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+           +  W P EV +  D   ++    L   E+ +   NL +    +S+  
Sbjct: 33  KHEVFERLIEKQLSFFWRPEEVDVSHDRIDYQ---ALPPHEQHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  + G++F+       I  
Sbjct: 90  RSPNVALLPLVSIPELETWIETWAFSETIHSRSYTHIIRNIVNNPGQVFDDIVTNEQILK 149

Query: 158 KANWALQYTQTLSSPS 173
           +A     +   L   +
Sbjct: 150 RAGSISCFYDDLIEAT 165


>gi|238797463|ref|ZP_04640962.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           mollaretii ATCC 43969]
 gi|238718734|gb|EEQ10551.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           mollaretii ATCC 43969]
          Length = 376

 Score = 94.1 bits (233), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P E+ +  D   +   N L D E+ +   NL +    +S+  
Sbjct: 33  KHAIFEKLIEKQLSFFWRPEEIDVSRDRIDY---NALPDHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWSFSETIHSRSYTHIIRNIVNDPAIVFDDIVTNEEILK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAKDISAYYDDL 161


>gi|238794995|ref|ZP_04638591.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           intermedia ATCC 29909]
 gi|238725698|gb|EEQ17256.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           intermedia ATCC 29909]
          Length = 376

 Score = 94.1 bits (233), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P E+ +  D   +   N L D E+ +   NL +    +S+  
Sbjct: 33  KHAIFEKLIEKQLSFFWRPEEIDVSRDRIDY---NALPDHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWSFSETIHSRSYTHIIRNIVNDPSIVFDDIVTNEEILK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAKDISAYYDDL 161


>gi|332162349|ref|YP_004298926.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|318606422|emb|CBY27920.1| ribonucleotide reductase of class Ia (aerobic),beta subunit
           [Yersinia enterocolitica subsp. palearctica Y11]
 gi|325666579|gb|ADZ43223.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|330864218|emb|CBX74276.1| ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           enterocolitica W22703]
          Length = 376

 Score = 94.1 bits (233), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P E+ +  D   +   N L D E+ +   NL +    +S+  
Sbjct: 33  KHAIFEKLIEKQLSFFWRPEEIDVSRDRIDY---NALPDHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWSFSETIHSRSYTHIIRNIVNDPSIVFDDIVTNEEILK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAKDISAYYDDL 161


>gi|260772919|ref|ZP_05881835.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           metschnikovii CIP 69.14]
 gi|260612058|gb|EEX37261.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           metschnikovii CIP 69.14]
          Length = 377

 Score = 94.1 bits (233), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 63/159 (39%), Gaps = 3/159 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
              +K   + +   L    +V +    KY    +      +  W P EV +  D   +  
Sbjct: 6   FTQKKNDQLKEPMFLGQPVNVARYDQQKYEIFEKLIEKQLSFFWRPEEVDVSSDRIDY-- 63

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              L D E+ +   NL +    +S+   +  +A+   +S PE   ++   +F E +HS +
Sbjct: 64  -GKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPELETWIETWSFSETIHSRS 122

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           + +II ++  D   +F+   E   I  +A     Y   L
Sbjct: 123 YTHIIRNIINDPAVVFDDIVENEHILKRAKDIAHYYDDL 161


>gi|308049658|ref|YP_003913224.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Ferrimonas balearica DSM 9799]
 gi|307631848|gb|ADN76150.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Ferrimonas balearica DSM 9799]
          Length = 378

 Score = 94.1 bits (233), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P EV +  D   +   N L D E+ +   NL +    +S+  
Sbjct: 35  KHRIFEDLIEKQLSFFWRPEEVDVTQDRIDY---NALPDHEKHIFISNLKYQTLLDSIQG 91

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D G +F+       I  
Sbjct: 92  RSPNVALLPLVSLPELETWIETWSFYETIHSRSYTHIIRNIVNDPGVVFDDIVVNEEIQK 151

Query: 158 KANWALQYTQTL 169
           +A+   QY   L
Sbjct: 152 RASDISQYYDDL 163


>gi|123441721|ref|YP_001005705.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122088682|emb|CAL11484.1| ribonucleoside-diphosphate reductase 1 beta chain [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 376

 Score = 93.8 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P E+ +  D   +   N L D E+ +   NL +    +S+  
Sbjct: 33  KHAIFEKLIEKQLSFFWRPEEIDVSRDRIDY---NALPDHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWSFSETIHSRSYTHIIRNIVNDPSIVFDDIVTNEEILK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAKDISAYYDDL 161


>gi|238760194|ref|ZP_04621340.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           aldovae ATCC 35236]
 gi|238701573|gb|EEP94144.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           aldovae ATCC 35236]
          Length = 376

 Score = 93.8 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P E+ +  D   +   N L D E+ +   NL +    +S+  
Sbjct: 33  KHAIFEKLIEKQLSFFWRPEEIDVSRDRIDY---NALPDHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWSFSETIHSRSYTHIIRNIVNDPSIVFDDIVTNEEILK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAKDISAYYDDL 161


>gi|24373963|ref|NP_718006.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           oneidensis MR-1]
 gi|24348405|gb|AAN55450.1|AE015682_5 ribonucleoside-diphosphate reductase, beta subunit [Shewanella
           oneidensis MR-1]
          Length = 376

 Score = 93.8 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   +   N L D E+ +   NL +    +S+  
Sbjct: 33  KYEVFEKLIEKQLSFFWRPEEVDVSRDKIDY---NSLPDHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A    +S PE   ++   +F E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVAFLPLVSLPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVIFDDIVVNHEILR 149

Query: 158 KANWALQYTQTL 169
           +A    ++   L
Sbjct: 150 RATDIAEFYDHL 161


>gi|6782388|emb|CAB70099.1| ribonucleotide reductase R2 subunit [Plasmodium yoelii]
          Length = 111

 Score = 93.8 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 3/77 (3%)

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPS 154
            N+     R +   E +++   Q   E +HS T+  +I +   DE E   LF+    +P+
Sbjct: 1   ENLASKFLREVEIIEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKERLNLFHAIENIPA 60

Query: 155 ITAKANWALQYTQTLSS 171
           I  KA WA ++    +S
Sbjct: 61  IKNKALWAAKWINDTNS 77


>gi|330829606|ref|YP_004392558.1| ribonucleoside diphosphate reductase 1 subunit beta, ferritin-like
           protein [Aeromonas veronii B565]
 gi|328804742|gb|AEB49941.1| Ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Aeromonas veronii B565]
          Length = 393

 Score = 93.8 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 54/136 (39%), Gaps = 3/136 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+           +  W P EV +  D   ++    L   E+ +   NL +    +S+  
Sbjct: 49  KHEVFERLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPPHEQHIFISNLKYQTLLDSIQG 105

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++     ++F+       I  
Sbjct: 106 RSPNVALLPLVSIPELETWIETWAFSETIHSRSYTHIIRNIVNTPAQVFDDIVTNEQILK 165

Query: 158 KANWALQYTQTLSSPS 173
           +A     +   L   +
Sbjct: 166 RAGSISHFYDDLIEAT 181


>gi|294637129|ref|ZP_06715438.1| ribonucleoside-diphosphate reductase, beta subunit [Edwardsiella
           tarda ATCC 23685]
 gi|291089663|gb|EFE22224.1| ribonucleoside-diphosphate reductase, beta subunit [Edwardsiella
           tarda ATCC 23685]
          Length = 376

 Score = 93.8 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P EV +  D   ++    L D E+ +   NL +    +S+  
Sbjct: 33  KHEIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPDHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWSFSETIHSRSYTHIIRNIVTDPSVVFDDIVSNEEILK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RARDISVYYDDL 161


>gi|217973230|ref|YP_002357981.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           baltica OS223]
 gi|304408853|ref|ZP_07390474.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS183]
 gi|307302856|ref|ZP_07582611.1| Ribonucleoside-diphosphate reductase [Shewanella baltica BA175]
 gi|217498365|gb|ACK46558.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS223]
 gi|304352674|gb|EFM17071.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS183]
 gi|306913216|gb|EFN43638.1| Ribonucleoside-diphosphate reductase [Shewanella baltica BA175]
 gi|315267707|gb|ADT94560.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS678]
          Length = 376

 Score = 93.8 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 54/132 (40%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   +     L D E+ +   NL +    +S+  
Sbjct: 33  KYEVFEKLIEKQLSFFWRPEEVDVSRDKIDY---GALPDHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A    +S PE   ++   +F E +HS ++ +II ++  D   +F+       I +
Sbjct: 90  RSPNVAFLPLVSLPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVIFDDIVVNKEILS 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RATDIAAYYDHL 161


>gi|153000811|ref|YP_001366492.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           baltica OS185]
 gi|160875520|ref|YP_001554836.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           baltica OS195]
 gi|151365429|gb|ABS08429.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS185]
 gi|160861042|gb|ABX49576.1| Ribonucleoside-diphosphate reductase [Shewanella baltica OS195]
          Length = 386

 Score = 93.8 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 54/132 (40%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   +     L D E+ +   NL +    +S+  
Sbjct: 43  KYEVFEKLIEKQLSFFWRPEEVDVSRDKIDY---GALPDHEKHIFISNLKYQTLLDSIQG 99

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A    +S PE   ++   +F E +HS ++ +II ++  D   +F+       I +
Sbjct: 100 RSPNVAFLPLVSLPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVIFDDIVVNKEILS 159

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 160 RATDIAAYYDHL 171


>gi|262171721|ref|ZP_06039399.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           mimicus MB-451]
 gi|261892797|gb|EEY38783.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           mimicus MB-451]
          Length = 377

 Score = 93.4 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 63/159 (39%), Gaps = 3/159 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
              +K   + +   L    +V +    KY    +      +  W P EV +  D   +  
Sbjct: 6   FTQKKNDQLKEPMFLGQPVNVARYDQQKYEIFEKLIEKQLSFFWRPEEVDVSSDRIDY-- 63

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              L D E+ +   NL +    +S+   +  +A+   +S PE   ++   +F E +HS +
Sbjct: 64  -GKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPELETWIETWSFSETIHSRS 122

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           + +II ++  D   +F+   E   I  +A     Y   L
Sbjct: 123 YTHIIRNIVNDPAVVFDDIVENEHIIKRAKDIAHYYDDL 161


>gi|258624428|ref|ZP_05719375.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio mimicus
           VM603]
 gi|258583275|gb|EEW08077.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio mimicus
           VM603]
          Length = 381

 Score = 93.4 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 63/159 (39%), Gaps = 3/159 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
              +K   + +   L    +V +    KY    +      +  W P EV +  D   +  
Sbjct: 10  FTQKKNDQLKEPMFLGQPVNVARYDQQKYEIFEKLIEKQLSFFWRPEEVDVSSDRIDY-- 67

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              L D E+ +   NL +    +S+   +  +A+   +S PE   ++   +F E +HS +
Sbjct: 68  -GKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPELETWIETWSFSETIHSRS 126

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           + +II ++  D   +F+   E   I  +A     Y   L
Sbjct: 127 YTHIIRNIVNDPAVVFDDIVENEHIIKRAKDIAHYYDDL 165


>gi|258620211|ref|ZP_05715250.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio mimicus
           VM573]
 gi|258587569|gb|EEW12279.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio mimicus
           VM573]
          Length = 381

 Score = 93.4 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 63/159 (39%), Gaps = 3/159 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
              +K   + +   L    +V +    KY    +      +  W P EV +  D   +  
Sbjct: 10  FTQKKNDQLKEPMFLGQPVNVARYDQQKYEIFEKLIEKQLSFFWRPEEVDVSSDRIDY-- 67

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              L D E+ +   NL +    +S+   +  +A+   +S PE   ++   +F E +HS +
Sbjct: 68  -GKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPELETWIETWSFSETIHSRS 126

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           + +II ++  D   +F+   E   I  +A     Y   L
Sbjct: 127 YTHIIRNIVNDPAVVFDDIVENEHIIKRAKDIAHYYDDL 165


>gi|242238482|ref|YP_002986663.1| ribonucleotide-diphosphate reductase subunit beta [Dickeya dadantii
           Ech703]
 gi|242130539|gb|ACS84841.1| ribonucleotide reductase [Dickeya dadantii Ech703]
          Length = 376

 Score = 93.4 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 53/122 (43%), Gaps = 3/122 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 33  KYEIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEEILK 149

Query: 158 KA 159
           +A
Sbjct: 150 RA 151


>gi|262165506|ref|ZP_06033243.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           mimicus VM223]
 gi|262025222|gb|EEY43890.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           mimicus VM223]
          Length = 377

 Score = 93.4 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 63/159 (39%), Gaps = 3/159 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
              +K   + +   L    +V +    KY    +      +  W P EV +  D   +  
Sbjct: 6   FTQKKNDQLKEPMFLGQPVNVARYDQQKYEIFEKLIEKQLSFFWRPEEVDVSSDRIDY-- 63

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              L D E+ +   NL +    +S+   +  +A+   +S PE   ++   +F E +HS +
Sbjct: 64  -GKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPELETWIETWSFSETIHSRS 122

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           + +II ++  D   +F+   E   I  +A     Y   L
Sbjct: 123 YTHIIRNIVNDPAVVFDDIVENEHIIKRAKDIAHYYDDL 161


>gi|76875271|emb|CAI86492.1| ribonucleoside-diphosphate reductase 1, beta subunit
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 359

 Score = 93.4 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 57/132 (43%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L D E+ +   NL +    +S+  
Sbjct: 16  KYPIFEKLIEKQLSFFWRPEEVDVSKDRLDFQ---ALPDHEKHIFLSNLKYQTLLDSVQG 72

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++      +F+       I+ 
Sbjct: 73  RSPNVALLPIVSLPELETWIETWAFSETIHSRSYTHIIRNVTQAPELIFDDIVSNDKISE 132

Query: 158 KANWALQYTQTL 169
           +A+   +Y   L
Sbjct: 133 RADAVTKYYDDL 144


>gi|126174279|ref|YP_001050428.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           baltica OS155]
 gi|125997484|gb|ABN61559.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella baltica OS155]
          Length = 376

 Score = 93.4 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 54/132 (40%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   +     L D E+ +   NL +    +S+  
Sbjct: 33  KYEVFEKLIEKQLSFFWRPEEVDVSRDKIDY---GALPDHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A    +S PE   ++   +F E +HS ++ +II ++  D   +F+       I +
Sbjct: 90  RSPNVAFLPLVSLPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVIFDDIVVNKEILS 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RATDIAAYYDHL 161


>gi|284009345|emb|CBA76525.1| ribonucleoside-diphosphate reductase 1, beta subunit [Arsenophonus
           nasoniae]
          Length = 378

 Score = 93.4 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 62/159 (38%), Gaps = 3/159 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
            +  K   + +        +V +    KY    +      +  W P E+ +  D   ++ 
Sbjct: 8   FSQTKNDQLQEPMFFGQPVNVARYDQQKYPIFEQLIEKQLSFFWRPEEIDVSRDRIDYQ- 66

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              L + E+ +   NL +    +S+   +  +A+   +S PE   ++   +F E +HS +
Sbjct: 67  --ALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWSFSETIHSRS 124

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           + +II ++  +   +F+       I  +A     Y   L
Sbjct: 125 YTHIIRNIVNEPSIIFDDIVTNNEILKRAKDISAYYDDL 163


>gi|238751211|ref|ZP_04612705.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           rohdei ATCC 43380]
 gi|238710485|gb|EEQ02709.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           rohdei ATCC 43380]
          Length = 399

 Score = 93.4 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 62/155 (40%), Gaps = 3/155 (1%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + +   L    +V +    K+    +      +  W P E+ +  D   ++    L
Sbjct: 33  KNNQLLEPMFLGQSVNVARFDQQKHAIFEKLIEKQLSFFWRPEEIDVSRDRIDYQ---AL 89

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            + E+ +   NL +    +S+   +  +A+   +S PE   ++   +F E +HS ++ +I
Sbjct: 90  PEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWSFSETIHSRSYTHI 149

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           I ++  D   +F+       I  +A     Y   L
Sbjct: 150 IRNIVNDPSVVFDDIVTNEEILKRAKDISAYYDDL 184


>gi|238021387|ref|ZP_04601813.1| hypothetical protein GCWU000324_01286 [Kingella oralis ATCC 51147]
 gi|237868367|gb|EEP69373.1| hypothetical protein GCWU000324_01286 [Kingella oralis ATCC 51147]
          Length = 384

 Score = 93.4 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 56/132 (42%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   + +   L + E+ +   NL +    +S+  
Sbjct: 40  KYETFEKLIEKQISFFWRPEEVDLSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQG 96

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  + +   +S PE   ++   +F E +HS ++ +II ++  D   +F+   +   I A
Sbjct: 97  RSPNVGLLPLVSLPELETWIETWSFFETIHSRSYTHIIRNIVNDPSVVFDDIVQNEYIIA 156

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 157 RAEDIACYYDDL 168


>gi|33620698|ref|NP_891801.1| aerobic NDP reductase small subunit [Enterobacteria phage RB49]
 gi|33438568|gb|AAL15125.2| aerobic NDP reductase small subunit [Enterobacteria phage RB49]
          Length = 386

 Score = 93.4 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 61/164 (37%), Gaps = 12/164 (7%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           ++    E      +  W P E+ +  D   +     + D E+     NL +    +S+  
Sbjct: 31  RHQVFEELIEKQLSFFWRPEEISLATDRIQY---LNMGDVEKRFFTENLKYQTLLDSIQG 87

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
                A    +S+P    +L    F E +HS ++ +I+ +  +D    F+   + P+I  
Sbjct: 88  RAPSAAFGPIVSDPTLDTWLQTWTFSETIHSRSYTHIMRNCFIDPASEFDQIIDNPAIMK 147

Query: 158 KANWALQYTQTL---------SSPSFHYWNKRRRSRILTRSLRF 192
           +A    +Y   +         +     YW +R     L  + RF
Sbjct: 148 RAESIGKYYDDVLYWIRKYENAKEDLRYWEERDDQTALDDARRF 191


>gi|71065825|ref|YP_264552.1| ribonucleotide-diphosphate reductase subunit beta [Psychrobacter
           arcticus 273-4]
 gi|71038810|gb|AAZ19118.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Psychrobacter arcticus 273-4]
          Length = 377

 Score = 93.4 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 54/132 (40%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P EV +  D   +     L+  E+ +   NL +    +S+  
Sbjct: 33  KHPIFEQLIEKQLSFFWRPEEVDVSRDRMDY---GNLSSHEQHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  + +   +S PE   ++    F E +HS ++ +II ++  D   +F+   +   I  
Sbjct: 90  RSPNVVLLPLVSIPELETWIETWTFSETIHSRSYTHIIRNIINDPAIVFDDIMQNEHILG 149

Query: 158 KANWALQYTQTL 169
           +A    +Y   L
Sbjct: 150 RAADIAKYYDDL 161


>gi|238753722|ref|ZP_04615083.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           ruckeri ATCC 29473]
 gi|238707958|gb|EEQ00315.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           ruckeri ATCC 29473]
          Length = 376

 Score = 93.4 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 52/122 (42%), Gaps = 3/122 (2%)

Query: 48  SACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRH 107
              +  W P E+ +  D   +   N L + E+ +   NL +    +S+   +  +A+   
Sbjct: 43  KQLSFFWRPEEIDVSRDRIDY---NALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPL 99

Query: 108 LSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQ 167
           +S PE   ++   +F E +HS ++ +II ++  D   +F+       I  +A     Y  
Sbjct: 100 ISIPELETWVETWSFSETIHSRSYTHIIRNIVNDPAVVFDDIVTNEEILKRAKDISSYYD 159

Query: 168 TL 169
            L
Sbjct: 160 DL 161


>gi|262402402|ref|ZP_06078963.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           sp. RC586]
 gi|262351184|gb|EEZ00317.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           sp. RC586]
          Length = 360

 Score = 93.4 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   +     L D E+ +   NL +    +S+  
Sbjct: 16  KYEIFEKLIEKQLSFFWRPEEVDVSSDRIDY---GKLPDHEKHIFISNLKYQTLLDSIQG 72

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+   E   I  
Sbjct: 73  RSPNVALLPLVSLPELETWIETWSFSETIHSRSYTHIIRNIVNDPAVVFDDIVENEHILK 132

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 133 RAKDIAHYYDDL 144


>gi|162139926|ref|YP_339935.2| ribonucleotide-diphosphate reductase subunit beta
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 376

 Score = 93.4 bits (231), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 57/132 (43%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L D E+ +   NL +    +S+  
Sbjct: 33  KYPIFEKLIEKQLSFFWRPEEVDVSKDRLDFQ---ALPDHEKHIFLSNLKYQTLLDSVQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++      +F+       I+ 
Sbjct: 90  RSPNVALLPIVSLPELETWIETWAFSETIHSRSYTHIIRNVTQAPELIFDDIVSNDKISE 149

Query: 158 KANWALQYTQTL 169
           +A+   +Y   L
Sbjct: 150 RADAVTKYYDDL 161


>gi|323497713|ref|ZP_08102728.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           sinaloensis DSM 21326]
 gi|323317189|gb|EGA70185.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           sinaloensis DSM 21326]
          Length = 377

 Score = 93.0 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 65/159 (40%), Gaps = 3/159 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
              +K   + +   L    +V +    K+    +      +  W P EV +  D   +  
Sbjct: 6   FNRKKNDQLKEPMFLGQSVNVARYDQQKFEIFEKLIEKQLSFFWRPEEVDVSSDRIDY-- 63

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            N L D E+ +   NL +    +S+   +  +A+   +S PE   ++   +F E +HS +
Sbjct: 64  -NKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPEVETWIETWSFSETIHSRS 122

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           + +II ++  D G +F+   E   I  +A     Y   L
Sbjct: 123 YTHIIRNIVNDPGIVFDDIVENEHILKRAEDISHYYDDL 161


>gi|229505158|ref|ZP_04394668.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae BX 330286]
 gi|229511170|ref|ZP_04400649.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae B33]
 gi|229515628|ref|ZP_04405087.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae TMA 21]
 gi|229518289|ref|ZP_04407733.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae RC9]
 gi|229521368|ref|ZP_04410787.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae TM 11079-80]
 gi|229525854|ref|ZP_04415259.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae bv. albensis VL426]
 gi|229529665|ref|ZP_04419055.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae 12129(1)]
 gi|229608178|ref|YP_002878826.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio cholerae
           MJ-1236]
 gi|229333439|gb|EEN98925.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae 12129(1)]
 gi|229339435|gb|EEO04452.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae bv. albensis VL426]
 gi|229341466|gb|EEO06469.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae TM 11079-80]
 gi|229345004|gb|EEO09978.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae RC9]
 gi|229347397|gb|EEO12357.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae TMA 21]
 gi|229351135|gb|EEO16076.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae B33]
 gi|229357381|gb|EEO22298.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae BX 330286]
 gi|229370833|gb|ACQ61256.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae MJ-1236]
          Length = 381

 Score = 93.0 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 63/159 (39%), Gaps = 3/159 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
              +K   + +   L    +V +    KY    +      +  W P EV +  D   +  
Sbjct: 10  FTQKKNDQLKEPMFLGQPVNVARYDQQKYEIFEKLIEKQLSFFWRPEEVDVSSDRIDY-- 67

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              L D E+ +   NL +    +S+   +  +A+   +S PE   ++   +F E +HS +
Sbjct: 68  -GKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPELETWIETWSFSETIHSRS 126

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           + +II ++  D   +F+   E   I  +A     Y   L
Sbjct: 127 YTHIIRNIVNDPAVVFDDIVENEHIIKRAKDIAHYYDDL 165


>gi|121590730|ref|ZP_01678061.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           2740-80]
 gi|147674333|ref|YP_001216820.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio cholerae
           O395]
 gi|153212320|ref|ZP_01948108.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           1587]
 gi|153801907|ref|ZP_01956493.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           MZO-3]
 gi|153823603|ref|ZP_01976270.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           B33]
 gi|153827294|ref|ZP_01979961.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           MZO-2]
 gi|153829732|ref|ZP_01982399.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           623-39]
 gi|227081427|ref|YP_002809978.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           M66-2]
 gi|254291706|ref|ZP_04962493.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           AM-19226]
 gi|254848379|ref|ZP_05237729.1| ribonucleoside-diphosphate reductase [Vibrio cholerae MO10]
 gi|297578847|ref|ZP_06940775.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio cholerae
           RC385]
 gi|298498653|ref|ZP_07008460.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           MAK 757]
 gi|9655738|gb|AAF94414.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           O1 biovar El Tor str. N16961]
 gi|121547411|gb|EAX57522.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           2740-80]
 gi|124116698|gb|EAY35518.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           1587]
 gi|124122552|gb|EAY41295.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           MZO-3]
 gi|126518882|gb|EAZ76105.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           B33]
 gi|146316216|gb|ABQ20755.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           O395]
 gi|148874766|gb|EDL72901.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           623-39]
 gi|149738785|gb|EDM53127.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           MZO-2]
 gi|150422390|gb|EDN14350.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           AM-19226]
 gi|227009315|gb|ACP05527.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           M66-2]
 gi|227013172|gb|ACP09382.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           O395]
 gi|254844084|gb|EET22498.1| ribonucleoside-diphosphate reductase [Vibrio cholerae MO10]
 gi|297536441|gb|EFH75274.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio cholerae
           RC385]
 gi|297542986|gb|EFH79036.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio cholerae
           MAK 757]
          Length = 389

 Score = 93.0 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 63/159 (39%), Gaps = 3/159 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
              +K   + +   L    +V +    KY    +      +  W P EV +  D   +  
Sbjct: 18  FTQKKNDQLKEPMFLGQPVNVARYDQQKYEIFEKLIEKQLSFFWRPEEVDVSSDRIDY-- 75

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              L D E+ +   NL +    +S+   +  +A+   +S PE   ++   +F E +HS +
Sbjct: 76  -GKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPELETWIETWSFSETIHSRS 134

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           + +II ++  D   +F+   E   I  +A     Y   L
Sbjct: 135 YTHIIRNIVNDPAVVFDDIVENEHIIKRAKDIAHYYDDL 173


>gi|161582009|ref|NP_230900.2| ribonucleotide-diphosphate reductase subunit beta [Vibrio cholerae
           O1 biovar El Tor str. N16961]
 gi|255745652|ref|ZP_05419600.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholera CIRS 101]
 gi|262159072|ref|ZP_06030184.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae INDRE 91/1]
 gi|262169430|ref|ZP_06037122.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae RC27]
 gi|262191406|ref|ZP_06049594.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae CT 5369-93]
 gi|255736727|gb|EET92124.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholera CIRS 101]
 gi|262022243|gb|EEY40952.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae RC27]
 gi|262029257|gb|EEY47909.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae INDRE 91/1]
 gi|262032695|gb|EEY51245.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           cholerae CT 5369-93]
 gi|327483944|gb|AEA78351.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Vibrio cholerae LMA3894-4]
          Length = 377

 Score = 93.0 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 63/159 (39%), Gaps = 3/159 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
              +K   + +   L    +V +    KY    +      +  W P EV +  D   +  
Sbjct: 6   FTQKKNDQLKEPMFLGQPVNVARYDQQKYEIFEKLIEKQLSFFWRPEEVDVSSDRIDY-- 63

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              L D E+ +   NL +    +S+   +  +A+   +S PE   ++   +F E +HS +
Sbjct: 64  -GKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPELETWIETWSFSETIHSRS 122

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           + +II ++  D   +F+   E   I  +A     Y   L
Sbjct: 123 YTHIIRNIVNDPAVVFDDIVENEHIIKRAKDIAHYYDDL 161


>gi|332035983|gb|EGI72462.1| ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Pseudoalteromonas haloplanktis ANT/505]
          Length = 376

 Score = 93.0 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 57/132 (43%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L D E+ +   NL +    +S+  
Sbjct: 33  KYPIFEKLIEKQLSFFWRPEEVDVSKDRLDFQ---ALPDHEKHIFLSNLKYQTLLDSVQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++      +F+       I+ 
Sbjct: 90  RSPNVALLPIVSLPELETWIETWAFSETIHSRSYTHIIRNVTQAPELIFDDIVSNDKISE 149

Query: 158 KANWALQYTQTL 169
           +A+   +Y   L
Sbjct: 150 RADAVTKYYDDL 161


>gi|38639969|ref|NP_943924.1| NrdB aerobic NDP reductase small subunit [Aeromonas phage Aeh1]
 gi|33414658|gb|AAQ17701.1| NrdB aerobic NDP reductase small subunit [Aeromonas phage Aeh1]
          Length = 376

 Score = 93.0 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 58/133 (43%), Gaps = 3/133 (2%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +K+    +      +  W P EV +  D   +   N L++ E+ +  +NL + +  +S+ 
Sbjct: 31  VKHPAIDKLTEKQLSFFWRPEEVDLSKDAIDY---NQLSEAEQHVFTQNLKYQSLLDSVQ 87

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSIT 156
                L     +S+     ++   +F E +HS ++ +I+ +L +D   +F+       I 
Sbjct: 88  GRAPNLVFLPIVSDVALETWITTWSFSETIHSRSYTHIMRNLYVDPSAVFDRILLDSKIM 147

Query: 157 AKANWALQYTQTL 169
           A+A    QY   L
Sbjct: 148 ARATSVTQYYDNL 160


>gi|93005945|ref|YP_580382.1| ribonucleotide-diphosphate reductase subunit beta [Psychrobacter
           cryohalolentis K5]
 gi|92393623|gb|ABE74898.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Psychrobacter cryohalolentis K5]
          Length = 377

 Score = 93.0 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 54/132 (40%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P EV +  D   +     L+  E+ +   NL +    +S+  
Sbjct: 33  KHPIFEQLIEKQLSFFWRPEEVDVSKDRMDF---GNLSSHEQHIFLSNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  + +   +S PE   ++    F E +HS ++ +II ++  D   +F+   +   I  
Sbjct: 90  RSPNVVLLPLVSIPELETWIETWTFSETIHSRSYTHIIRNIINDPAIVFDDIMQNEHILG 149

Query: 158 KANWALQYTQTL 169
           +A    +Y   L
Sbjct: 150 RAADIAKYYDDL 161


>gi|261211025|ref|ZP_05925315.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           sp. RC341]
 gi|260840000|gb|EEX66600.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           sp. RC341]
          Length = 360

 Score = 93.0 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   +     L D E+ +   NL +    +S+  
Sbjct: 16  KYEIFEKLIEKQLSFFWRPEEVDVSSDRIDY---GKLPDHEKHIFISNLKYQTLLDSIQG 72

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+   E   I  
Sbjct: 73  RSPNVALLPLVSLPELETWIETWSFSETIHSRSYTHIIRNIVNDPAVVFDDIVENEHIIK 132

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 133 RAKDIAHYYDDL 144


>gi|56460472|ref|YP_155753.1| ribonucleotide-diphosphate reductase subunit beta [Idiomarina
           loihiensis L2TR]
 gi|56179482|gb|AAV82204.1| Ribonucleotide reductase, beta subunit [Idiomarina loihiensis L2TR]
          Length = 377

 Score = 92.6 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P E+ +  D   +   N LT  E+ +   NL +    +S+  
Sbjct: 33  KHSIFEKLIEKQISFFWRPEEIDVSRDRIDF---NKLTASEKHVFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +I+ +L  D  E+F        I  
Sbjct: 90  RSPNIALLPIVSLPELETWIETWSFFETIHSRSYTHILRNLFSDPSEVFEDIVINEQIKI 149

Query: 158 KANWALQYTQTL 169
           +AN   +Y   L
Sbjct: 150 RANDISKYYDDL 161


>gi|254796877|ref|YP_003081714.1| ribonucleoside-diphosphate reductase, beta subunit [Neorickettsia
           risticii str. Illinois]
 gi|254590113|gb|ACT69475.1| ribonucleoside-diphosphate reductase, beta subunit [Neorickettsia
           risticii str. Illinois]
          Length = 286

 Score = 92.6 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 48/133 (36%), Gaps = 5/133 (3%)

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M DD+  W  K   T  E+ ++ +   FF  ++  V +  +         PE    L   
Sbjct: 1   MADDVQDWHHKICST--EKNLLTQIFRFFTQADVEVHDCYMRHYAGVFKPPEVCMMLTAF 58

Query: 121 AFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKR 180
           A  E +H   + +++ ++G+ E E +  + +   +  K  +   +   + SP+       
Sbjct: 59  ANMETIHIAAYAHLLDTVGMPETE-YLAFTKYRQMKEKCEYLKAF--KMDSPTEIAKTLA 115

Query: 181 RRSRILTRSLRFL 193
                      F 
Sbjct: 116 VYGAFTEGLQLFA 128


>gi|238695114|ref|YP_002922308.1| aerobic NDP reductase small subunit [Enterobacteria phage JSE]
 gi|220029250|gb|ACL78185.1| aerobic NDP reductase small subunit [Enterobacteria phage JSE]
          Length = 388

 Score = 92.6 bits (229), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 62/164 (37%), Gaps = 12/164 (7%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           ++    E    + +  W P E+ +  D   +     + D E+     NL +    +S+  
Sbjct: 33  RHQVFEELIEKSLSFFWRPEEISLATDRIQY---LNMGDVEKRFFTENLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
                A    +S+P    +L    F E +HS ++ +I+ +  +D    F+   + P+I  
Sbjct: 90  RAPSAAFGPIVSDPTLDTWLQTWTFSETIHSRSYTHIMRNCFIDPASEFDQIIDNPAIMK 149

Query: 158 KANWALQYTQTL---------SSPSFHYWNKRRRSRILTRSLRF 192
           +A    +Y   +         +     YW +R     L  + RF
Sbjct: 150 RAESIGKYYDDVLYWIRKYENAKEDLRYWEERDDQTALDDARRF 193


>gi|261253084|ref|ZP_05945657.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           orientalis CIP 102891]
 gi|260936475|gb|EEX92464.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           orientalis CIP 102891]
          Length = 377

 Score = 92.6 bits (229), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 64/159 (40%), Gaps = 3/159 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
               K   + +   L    +V +    K+    +      +  W P EV +  D   +  
Sbjct: 6   FNRTKNDQLKEPMFLGQSVNVARYDQQKFEIFEKLIEKQLSFFWRPEEVDVSSDRIDY-- 63

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            N L D E+ +   NL +    +S+   +  +A+   +S PE   ++   +F E +HS +
Sbjct: 64  -NKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPEVETWIETWSFSETIHSRS 122

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           + +II ++  D G +F+   E   I  +A     Y   L
Sbjct: 123 YTHIIRNIVNDPGLVFDDIVENEHILKRAKDISGYYDDL 161


>gi|320538993|ref|ZP_08038668.1| putative ribonucleoside diphosphate reductase 1, beta subunit,
           ferritin-like protein [Serratia symbiotica str. Tucson]
 gi|320030926|gb|EFW12930.1| putative ribonucleoside diphosphate reductase 1, beta subunit,
           ferritin-like protein [Serratia symbiotica str. Tucson]
          Length = 376

 Score = 92.6 bits (229), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 33  KHEIFEKLIEKQLSFFWRPEEVDVSCDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPLISIPELETWVETWSFSETIHSRSYTHIIRNIVNDPALVFDDIVTNEEILK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAKDISGYYDDL 161


>gi|209695249|ref|YP_002263178.1| ribonucleotide-diphosphate reductase subunit beta [Aliivibrio
           salmonicida LFI1238]
 gi|208009201|emb|CAQ79455.1| ribonucleoside-diphosphate reductase 1 beta chain [Aliivibrio
           salmonicida LFI1238]
          Length = 377

 Score = 92.6 bits (229), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 64/159 (40%), Gaps = 3/159 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
              EK   + +   L    +V +    K+    +      +  W P EV +  D   +  
Sbjct: 6   FRQEKNDQLKEPMFLGNSVNVARYDQQKFQVFEKLIEKQLSFFWRPEEVDVSGDRIDY-- 63

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            N L + E+ +   NL +    +S+   +  +A+   +S PE   ++   +F E +HS +
Sbjct: 64  -NNLPEHEQHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPELETWIETWSFSETIHSRS 122

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           + +I+ ++  D   +F+   E   I  +A     Y   L
Sbjct: 123 YTHIVRNIVNDPAIIFDDIVENEEILKRAKDIAHYYDNL 161


>gi|85711601|ref|ZP_01042658.1| ribonucleotide-diphosphate reductase beta subunit [Idiomarina
           baltica OS145]
 gi|85694461|gb|EAQ32402.1| ribonucleotide-diphosphate reductase beta subunit [Idiomarina
           baltica OS145]
          Length = 377

 Score = 92.2 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P EV +  D   +   N LT  E+ +   NL +    +S+  
Sbjct: 33  KHSIFEKLIEKQISFFWRPEEVDVSRDRVDF---NKLTASEKHVFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +I+ +L  D  E+F        I  
Sbjct: 90  RSPNIALLPIVSLPELETWIETWSFFETIHSRSYTHILRNLFSDPSEIFEDIVINDQIKL 149

Query: 158 KANWALQYTQTL 169
           +AN   +Y   L
Sbjct: 150 RANDISRYYDDL 161


>gi|27904669|ref|NP_777795.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. Bp (Baizongia pistaciae)]
 gi|38605263|sp|Q89AS5|RIR2_BUCBP RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|27904066|gb|AAO26900.1| ribonucleoside-diphosphate reductase 1 beta chain [Buchnera
           aphidicola str. Bp (Baizongia pistaciae)]
          Length = 376

 Score = 92.2 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 57/132 (43%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   +++   L   E+ +   NL +    +S+  
Sbjct: 33  KYEIFEKLIEKQLSFFWRPEEVDLSRDYIDFQN---LPQHEKHIFVSNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++      +F+   +  +I  
Sbjct: 90  RSPNIALLPIVSLPELETWIETWSFSETIHSRSYTHIIRNIINTPSLIFDDIIDNKNIAN 149

Query: 158 KANWALQYTQTL 169
           +A    +Y   L
Sbjct: 150 RAKDIAKYYDDL 161


>gi|148978906|ref|ZP_01815226.1| ribonucleotide-diphosphate reductase beta subunit [Vibrionales
           bacterium SWAT-3]
 gi|145962104|gb|EDK27390.1| ribonucleotide-diphosphate reductase beta subunit [Vibrionales
           bacterium SWAT-3]
          Length = 377

 Score = 92.2 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 66/159 (41%), Gaps = 3/159 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
            + +K   + +   L    +V +    K+    +      +  W P EV +  D   +  
Sbjct: 6   FSQKKNDQLKEPMFLGQSVNVARYDQQKFEIFEKLIEKQLSFFWRPEEVDVSSDRIDY-- 63

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            N L + E+ +   NL +    +S+   +  +A+   +S PE   ++   +F E +HS +
Sbjct: 64  -NKLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPEVETWIETWSFSETIHSRS 122

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           + +II ++  D G +F+   E   I  +A     Y   L
Sbjct: 123 YTHIIRNIVNDPGLVFDDIVENEEILKRAKDIAFYYDDL 161


>gi|238788616|ref|ZP_04632408.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           frederiksenii ATCC 33641]
 gi|238723211|gb|EEQ14859.1| Ribonucleoside-diphosphate reductase 1 subunit beta [Yersinia
           frederiksenii ATCC 33641]
          Length = 383

 Score = 92.2 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 56/132 (42%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P E+ +  D   +++   L + E+ +   NL +    +S+  
Sbjct: 40  KHAIFEKLIEKQLSFFWRPEEIDVSRDRIDYQN---LPEHEKHIFISNLKYQTLLDSIQG 96

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+       I  
Sbjct: 97  RSPNIALLPIISIPELETWVETWSFSETIHSRSYTHIIRNIVNDPAIVFDDIVTNEEILK 156

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 157 RAKDISAYYDDL 168


>gi|229542075|ref|ZP_04431135.1| Ribonucleoside-diphosphate reductase [Bacillus coagulans 36D1]
 gi|229326495|gb|EEN92170.1| Ribonucleoside-diphosphate reductase [Bacillus coagulans 36D1]
          Length = 347

 Score = 92.2 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/196 (21%), Positives = 73/196 (37%), Gaps = 7/196 (3%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVP 60
           M+N              N          S +     L Y   ++ Y     N+W   EV 
Sbjct: 1   MSNALLEKAKTLDPVHPNKATALFGGKSSGILNWNDLAYPHWYKTYKRLLGNYWQSDEVN 60

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQ 120
           M  D+   K    L++ E+    + +   A+ +S     I+LA   + ++P  +  L   
Sbjct: 61  MSTDV---KQFPLLSEKEQETFLKIISLLATLDSSQTRTILLA-SLYATDPSIQSILAVI 116

Query: 121 AFEEAVHSHTFQYIITSLGL--DEGELFNMYREVPSITAKANWAL-QYTQTLSSPSFHYW 177
           A +EAVH+ ++ YI++S+     + E F + R+ P +  +    + QY      P     
Sbjct: 117 AQQEAVHNESYSYILSSVVSLDKQNEAFEIGRKDPVLLKRNKKLMEQYNAFAQQPDVEDI 176

Query: 178 NKRRRSRILTRSLRFL 193
            K      L   L F 
Sbjct: 177 VKTLVYSTLLEGLFFY 192


>gi|326536452|ref|YP_004300883.1| NrdB aerobic ribonucleoside diphosphate reductase small subunit
           [Aeromonas phage 65]
 gi|312262798|gb|ADQ53054.1| NrdB aerobic ribonucleoside diphosphate reductase small subunit
           [Aeromonas phage 65]
          Length = 376

 Score = 92.2 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 63/163 (38%), Gaps = 4/163 (2%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
           S +       + +         +V +   +K    ++      +  W PTE+ M  D   
Sbjct: 3   STVFNTNIVDHTNQHMFFGEEPNVQRFDTMKTRVFYDLMDRQLSFFWRPTEIDMSKDSIQ 62

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE-AV 126
           +     L+D  + +  +NL   +  +S+      L +  H+S+     ++      E  +
Sbjct: 63  FHQ---LSDHAKHVYTQNLFVQSLLDSIQGRGPNLVLLPHVSDVTLENFITAWTMVEGTI 119

Query: 127 HSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           HS ++ +++ ++  +  E+F+     P I  +A    +Y   +
Sbjct: 120 HSDSYTHMVRAVYPNPTEVFDQVMLTPEIMKRAEAITKYYDAV 162


>gi|262274472|ref|ZP_06052283.1| ribonucleotide reductase of class Ia (aerobic) beta subunit
           [Grimontia hollisae CIP 101886]
 gi|262221035|gb|EEY72349.1| ribonucleotide reductase of class Ia (aerobic) beta subunit
           [Grimontia hollisae CIP 101886]
          Length = 360

 Score = 92.2 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 57/132 (43%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV + +D   +   N L + E+ +   NL +    +S+  
Sbjct: 16  KYEIFEKLIEKQLSFFWRPEEVDVSNDRIDY---NKLPEHEKHIFISNLKYQTLLDSIQG 72

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  +   +F+       I  
Sbjct: 73  RSPNVALLPLVSIPELETWIETWSFSETIHSRSYTHIIRNIVTNPSLVFDDIVVNEHIIK 132

Query: 158 KANWALQYTQTL 169
           +AN    Y   L
Sbjct: 133 RANDIAGYYDDL 144


>gi|78486104|ref|YP_392029.1| ribonucleotide-diphosphate reductase subunit beta [Thiomicrospira
           crunogena XCL-2]
 gi|78364390|gb|ABB42355.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Thiomicrospira crunogena XCL-2]
          Length = 377

 Score = 91.8 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 59/145 (40%), Gaps = 3/145 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P E+ +  D   + +   L + E+ +   NL +    +S+  
Sbjct: 39  KHPIFEKLIEKQLSFFWRPEEIDLSSDRGEYAN---LPEHEKHVFISNLKYQTLLDSVQG 95

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+       I  
Sbjct: 96  RSPNVALLPLVSIPELETWIETWSFSETIHSRSYTHIIRNIVSDPSLVFDDIVANEEIVK 155

Query: 158 KANWALQYTQTLSSPSFHYWNKRRR 182
           +A     Y   L + +   + +   
Sbjct: 156 RAISVTVYYDKLINLTNRMYAEEID 180


>gi|312885176|ref|ZP_07744856.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309367189|gb|EFP94761.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 377

 Score = 91.8 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 64/159 (40%), Gaps = 3/159 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
               K   + +   L    +V +    K+    +      +  W P EV +  D   +  
Sbjct: 6   FNRTKNDQLKEPMFLGQSVNVARYDQQKFEIFEKLIEKQLSFFWRPEEVDVSSDRIDF-- 63

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            N L + E+ +   NL +    +S+   +  +A+   +S PE   ++   +F E +HS +
Sbjct: 64  -NKLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPEVETWIETWSFSETIHSRS 122

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           + +II ++  D G +F+   E   I  +A     Y   L
Sbjct: 123 YTHIIRNIVNDPGLVFDDIVENEHILKRAEDISHYYDDL 161


>gi|310830452|ref|YP_003965553.1| Ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           polymyxa SC2]
 gi|309249919|gb|ADO59485.1| Ribonucleoside-diphosphate reductase, beta subunit [Paenibacillus
           polymyxa SC2]
          Length = 342

 Score = 91.8 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 75/176 (42%), Gaps = 7/176 (3%)

Query: 18  NVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD 77
           N  ++ +    S +     ++    ++ Y     NHW+P+E+PM  D + +     L  +
Sbjct: 13  NKSNRIIEGESSGILNWDDIRLPQMYKLYRVLIGNHWIPSEIPMNVDKSDF---PMLPTN 69

Query: 78  ERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS 137
            +   KR +G  A  +S+     V  +  +L++            +E +H+ ++ Y+++S
Sbjct: 70  TQNTFKRIIGLLAVLDSMQTM-FVGDVREYLTDSSLEAVAAIIGQQEVIHNQSYSYVLSS 128

Query: 138 LG--LDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSL 190
           L    ++ E+F  ++  P +  +  +    Y     SPS   + K   + ++   +
Sbjct: 129 LVSYTEQLEIFEYWKNDPILLKRNLFIRDAYQAFRESPSPETFFKALVADMVLEGI 184


>gi|117619492|ref|YP_856857.1| ribonucleotide-diphosphate reductase subunit beta [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
 gi|117560899|gb|ABK37847.1| ribonucleoside-diphosphate reductase, beta subunit [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 377

 Score = 91.8 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 54/136 (39%), Gaps = 3/136 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+           +  W P EV +  D   ++    L   E+ +   NL +    +S+  
Sbjct: 33  KHEVFERLIEKQLSFFWRPEEVDVSHDRIDFQ---ALPPHEQHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++     ++F+       I  
Sbjct: 90  RSPNVALLPLVSIPELETWIETWAFSETIHSRSYTHIIRNIVNTPAQVFDDIVTNEQILK 149

Query: 158 KANWALQYTQTLSSPS 173
           +A     +   L   +
Sbjct: 150 RAGSISHFYDDLIEAT 165


>gi|91227184|ref|ZP_01261643.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
           alginolyticus 12G01]
 gi|262393879|ref|YP_003285733.1| ribonucleotide reductase of class Ia (aerobic) subunit beta [Vibrio
           sp. Ex25]
 gi|269967067|ref|ZP_06181135.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
           alginolyticus 40B]
 gi|91188712|gb|EAS75000.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
           alginolyticus 12G01]
 gi|262337473|gb|ACY51268.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           sp. Ex25]
 gi|269828326|gb|EEZ82592.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
           alginolyticus 40B]
          Length = 377

 Score = 91.8 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 64/159 (40%), Gaps = 3/159 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
              +K   + +   L    +V +    K+    +      +  W P EV +  D   +  
Sbjct: 6   FNQKKNDQLKEPMFLGQSVNVARYDQQKFEIFEKLIEKQLSFFWRPEEVDVSSDRIDY-- 63

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            N L D E+ +   NL +    +S+   +  +A+   +S PE   ++   +F E +HS +
Sbjct: 64  -NKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPELETWIETWSFSETIHSRS 122

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           + +II ++  D   +F+   E   I  +A     Y   L
Sbjct: 123 YTHIIRNIVNDPAVVFDDIVENEHILKRAKDIAHYYDDL 161


>gi|148653376|ref|YP_001280469.1| ribonucleotide-diphosphate reductase subunit beta [Psychrobacter
           sp. PRwf-1]
 gi|148572460|gb|ABQ94519.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Psychrobacter sp. PRwf-1]
          Length = 377

 Score = 91.8 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P EV +  D   +     L+  E+ +   NL +    +S+  
Sbjct: 33  KHPIFEQLIEKQLSFFWRPEEVDVSKDRIDY---GNLSTHEQHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  + +   +S PE   ++   +F E +HS ++ +II ++  D   +F+   E   I  
Sbjct: 90  RSPNVVLLPLVSIPELETWIETWSFSETIHSRSYTHIIRNIVNDPAVVFDDIMENEHILQ 149

Query: 158 KANWALQYTQTL 169
           +A+    Y   L
Sbjct: 150 RASDIAYYYDDL 161


>gi|260768282|ref|ZP_05877216.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           furnissii CIP 102972]
 gi|260616312|gb|EEX41497.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           furnissii CIP 102972]
 gi|315179989|gb|ADT86903.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio furnissii
           NCTC 11218]
          Length = 377

 Score = 91.8 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   +     L + E+ +   NL +    +S+  
Sbjct: 33  KYEIFEKLIEKQLSFFWRPEEVDVSSDRIDYAK---LPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+   E   I  
Sbjct: 90  RSPNVALLPLVSLPEVETWIETWSFSETIHSRSYTHIIRNIVNDPAIVFDDIVENEHIIK 149

Query: 158 KANWALQYTQTL 169
           +A     +   L
Sbjct: 150 RAKDIAHFYDDL 161


>gi|84386981|ref|ZP_00990005.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
           splendidus 12B01]
 gi|86148466|ref|ZP_01066756.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp.
           MED222]
 gi|218709927|ref|YP_002417548.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           splendidus LGP32]
 gi|84378271|gb|EAP95130.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio
           splendidus 12B01]
 gi|85833763|gb|EAQ51931.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp.
           MED222]
 gi|218322946|emb|CAV19123.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           splendidus LGP32]
          Length = 377

 Score = 91.8 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 66/159 (41%), Gaps = 3/159 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
            + +K   + +   L    +V +    K+    +      +  W P EV +  D   +  
Sbjct: 6   FSQQKNDQLKEPMFLGQSVNVARYDQQKFEIFEKLIEKQLSFFWRPEEVDVSSDRIDY-- 63

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            N L + E+ +   NL +    +S+   +  +A+   +S PE   ++   +F E +HS +
Sbjct: 64  -NKLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPEVETWIETWSFSETIHSRS 122

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           + +II ++  D G +F+   E   I  +A     Y   L
Sbjct: 123 YTHIIRNIVNDPGVVFDDIVENEEILKRAKDIAFYYDDL 161


>gi|315126539|ref|YP_004068542.1| ribonucleotide-diphosphate reductase subunit beta
           [Pseudoalteromonas sp. SM9913]
 gi|315015053|gb|ADT68391.1| ribonucleotide-diphosphate reductase subunit beta
           [Pseudoalteromonas sp. SM9913]
          Length = 376

 Score = 91.8 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L D E+ +   NL +    +S+  
Sbjct: 33  KYPIFEKLIEKQLSFFWRPEEVDVSKDRLDFQ---ALPDHEKHIFLSNLKYQTLLDSVQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++      +F+       I+ 
Sbjct: 90  RSPNVALLPIVSIPELETWIETWAFSETIHSRSYTHIIRNVTQAPELIFDDIVSNDKISE 149

Query: 158 KANWALQYTQTL 169
           +A+    Y   L
Sbjct: 150 RADAVTTYYDDL 161


>gi|152991848|ref|YP_001357569.1| ribonucleoside-diphosphate reductase, beta subunit [Sulfurovum sp.
           NBC37-1]
 gi|151423709|dbj|BAF71212.1| ribonucleoside-diphosphate reductase, beta subunit [Sulfurovum sp.
           NBC37-1]
          Length = 337

 Score = 91.8 bits (227), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 70/183 (38%), Gaps = 6/183 (3%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
              +    +D+K    + +        KY W    Y     N W P+EV    +    K+
Sbjct: 7   YNPQGEEILDEKIYGGSPTGFVDFNRSKYRWDSNIYDLMNANTWFPSEVNTSTEK---KN 63

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              LTD+E+ + K      + ++S     +     R  +N   +  +  Q  +E  HS +
Sbjct: 64  FEALTDNEQSIYKMTFAQLSFNDSAQEEYLSD-FRRLANNRLVKSVISLQIMQEVNHSKS 122

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKA-NWALQYTQTLSSPSFHYWNKRRRSRILTRS 189
           +  ++ + G +  E+FN+Y+   ++  K    A Q+ + +   S         + +    
Sbjct: 123 YAVLLDACG-NSEEVFNLYKYDAALNKKNLQVAEQFAKYIDGGSADKMLLSAMASVNLEG 181

Query: 190 LRF 192
           + F
Sbjct: 182 IYF 184


>gi|27366311|ref|NP_761839.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           vulnificus CMCP6]
 gi|37679427|ref|NP_934036.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           vulnificus YJ016]
 gi|320156821|ref|YP_004189200.1| ribonucleotide reductase of class Ia (aerobic), subunit beta
           [Vibrio vulnificus MO6-24/O]
 gi|27362512|gb|AAO11366.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Vibrio vulnificus CMCP6]
 gi|37198171|dbj|BAC94007.1| ribonucleotide reductase, beta subunit [Vibrio vulnificus YJ016]
 gi|319932133|gb|ADV86997.1| ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Vibrio vulnificus MO6-24/O]
          Length = 377

 Score = 91.8 bits (227), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 63/159 (39%), Gaps = 3/159 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
               K   + +   L    +V +    K+    +      +  W P EV +  D   +  
Sbjct: 6   FNQTKNDQLKEPMFLGQSVNVARYDQQKFEIFEKLIEKQLSFFWRPEEVDVSSDRIDY-- 63

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            N L D E+ +   NL +    +S+   +  +A+   +S PE   ++   +F E +HS +
Sbjct: 64  -NKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPELETWIETWSFSETIHSRS 122

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           + +II ++  D   +F+   E   I  +A     Y   L
Sbjct: 123 YTHIIRNIVNDPSVVFDDIVENEHILKRAKDIAHYYDDL 161


>gi|319957101|ref|YP_004168364.1| ribonucleoside-diphosphate reductase [Nitratifractor salsuginis DSM
           16511]
 gi|319419505|gb|ADV46615.1| Ribonucleoside-diphosphate reductase [Nitratifractor salsuginis DSM
           16511]
          Length = 337

 Score = 91.8 bits (227), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 69/174 (39%), Gaps = 7/174 (4%)

Query: 21  DKRMLNARSDVN-QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER 79
           D+++              +Y W+   Y     N W P+EV   ++   +   + LTD+E+
Sbjct: 16  DEKIYGGNPTGFVDFNRPRYKWSVNLYDLMNANTWFPSEVNTANEKKHF---DLLTDNEQ 72

Query: 80  LMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
            + K      + ++S     +     R  +N   +  L  Q  +E  HS ++  ++ + G
Sbjct: 73  AIYKLTFAQLSFNDSAQEEYLSD-FRRLANNRLVKAALSLQIMQEVNHSKSYAVLLDAAG 131

Query: 140 LDEGELFNMYREVPSITAKAN-WALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
            +  E+F++Y+   ++  K    A Q+ + +   S         + +    + F
Sbjct: 132 -NSDEVFDLYKHDAALNRKNQRIANQFARYIDGNSAEEMLLSAMASVNLEGIYF 184


>gi|119472403|ref|ZP_01614521.1| ribonucleotide-diphosphate reductase beta subunit [Alteromonadales
           bacterium TW-7]
 gi|119444925|gb|EAW26223.1| ribonucleotide-diphosphate reductase beta subunit [Alteromonadales
           bacterium TW-7]
          Length = 376

 Score = 91.4 bits (226), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 56/132 (42%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 33  KYPIFEKLIEKQLSFFWRPEEVDVSKDRLDFQ---ALPEHEKHIFLSNLKYQTLLDSVQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++      +F+       I+ 
Sbjct: 90  RSPNVALLPIVSIPELETWIETWAFSETIHSRSYTHIIRNVTQSPELIFDDIVSNDKISE 149

Query: 158 KANWALQYTQTL 169
           +A+    Y   L
Sbjct: 150 RADAVTTYYDDL 161


>gi|293411957|ref|ZP_06654682.1| ribonucleoside-diphosphate reductase [Escherichia coli B354]
 gi|309797907|ref|ZP_07692288.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 145-7]
 gi|220980068|emb|CAP72260.1| Ribonucleoside-diphosphate reductase subunit beta [Escherichia coli
           LF82]
 gi|291469512|gb|EFF12001.1| ribonucleoside-diphosphate reductase [Escherichia coli B354]
 gi|308118515|gb|EFO55777.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 145-7]
 gi|323934216|gb|EGB30640.1| ribonucleotide reductase [Escherichia coli E1520]
          Length = 380

 Score = 91.4 bits (226), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 2/122 (1%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   + +K  L D ER +   NL +    +S+  
Sbjct: 33  KYRDFEKLIERQLSFFWRPEEVDISSDRIDFNTK--LRDHERHIFLSNLRYQTLLDSVQG 90

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +    +   +S PE   ++   +F E +HS ++ +II  +  D   +F+       I  
Sbjct: 91  RSPNATLLPLISIPELETWVETWSFSETIHSRSYTHIIRGMVDDPSIVFDGIVTDEEIIN 150

Query: 158 KA 159
           +A
Sbjct: 151 RA 152


>gi|323494790|ref|ZP_08099889.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           brasiliensis LMG 20546]
 gi|323310983|gb|EGA64148.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           brasiliensis LMG 20546]
          Length = 377

 Score = 91.4 bits (226), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 64/159 (40%), Gaps = 3/159 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
               K   + +   L    +V +    K+    +      +  W P EV +  D   +  
Sbjct: 6   FNRNKNDQLKEPMFLGQSVNVARYDQQKFEIFEKLIEKQLSFFWRPEEVDVSSDRIDY-- 63

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            N L + E+ +   NL +    +S+   +  +A+   +S PE   ++   +F E +HS +
Sbjct: 64  -NKLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPEVETWIETWSFSETIHSRS 122

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           + +II ++  D G +F+   E   I  +A     Y   L
Sbjct: 123 YTHIIRNIVNDPGLVFDDIVENEHILKRAEDISHYYDDL 161


>gi|260778827|ref|ZP_05887719.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260604991|gb|EEX31286.1| ribonucleotide reductase of class Ia (aerobic) beta subunit [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 377

 Score = 91.4 bits (226), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 64/159 (40%), Gaps = 3/159 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
               K   + +   L    +V +    K+    +      +  W P EV +  D   +  
Sbjct: 6   FNRNKNDQLKEPMFLGQSVNVARYDQQKFEIFEKLIEKQLSFFWRPEEVDVSSDRIDY-- 63

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            N L + E+ +   NL +    +S+   +  +A+   +S PE   ++   +F E +HS +
Sbjct: 64  -NKLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPEVETWIETWSFSETIHSRS 122

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           + +II ++  D G +F+   E   I  +A     Y   L
Sbjct: 123 YTHIIRNIVNDPGLVFDDIVENEHILKRAEDISHYYDDL 161


>gi|59711808|ref|YP_204584.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio fischeri
           ES114]
 gi|197336251|ref|YP_002156001.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio fischeri
           MJ11]
 gi|59479909|gb|AAW85696.1| ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like
           protein [Vibrio fischeri ES114]
 gi|197317741|gb|ACH67188.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio fischeri
           MJ11]
          Length = 377

 Score = 91.4 bits (226), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 64/159 (40%), Gaps = 3/159 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
              EK   + +   L    +V +    K+    +      +  W P EV +  D   +  
Sbjct: 6   FRQEKNDQLKEPMFLGNSVNVARYDQQKFQIFEKLIEKQLSFFWRPEEVDVSGDRIDY-- 63

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            N L + E+ +   NL +    +S+   +  +A+   +S PE   ++   +F E +HS +
Sbjct: 64  -NNLPEHEQHIFISNLKYQTLLDSIQGRSPNVALLPLVSIPELETWIETWSFSETIHSRS 122

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           + +II ++  +   +F+   E   I  +A     Y   L
Sbjct: 123 YTHIIRNIVNNPSVIFDDIVENEEILKRAKDIAHYYDNL 161


>gi|45478633|ref|NP_995489.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           biovar Microtus str. 91001]
 gi|52788092|ref|YP_093920.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis]
 gi|145597234|ref|YP_001154698.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Pestoides F]
 gi|162417832|ref|YP_001604568.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Angola]
 gi|229896974|ref|ZP_04512133.1| Ribonucleotide reductase of class Ia (aerobic),beta subunit
           [Yersinia pestis Pestoides A]
 gi|45357286|gb|AAS58680.1| putative ribonucleoside-diphosphate reductase beta subunit
           [Yersinia pestis biovar Microtus str. 91001]
 gi|52538021|emb|CAG27446.1| putative ribonucleoside-diphosphate reductase beta subunit
           [Yersinia pestis]
 gi|145213002|gb|ABP42407.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Yersinia pestis Pestoides F]
 gi|162350804|gb|ABX84753.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           Angola]
 gi|229700010|gb|EEO88050.1| Ribonucleotide reductase of class Ia (aerobic),beta subunit
           [Yersinia pestis Pestoides A]
          Length = 380

 Score = 91.4 bits (226), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 2/122 (1%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   + +K  L + ER +   NL +    +S+  
Sbjct: 33  KYRDFEKLIEKQLSFFWRPEEVDITTDRIDFNTK--LQEHERHIFLSNLRYQTLLDSVQG 90

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +    +   +S PE   ++   +F E +HS ++ +II  +  D   +F+       I +
Sbjct: 91  RSPNATLLPLISIPELETWVETWSFSETIHSRSYTHIIRGMVDDPSIVFDGIVTDEEIIS 150

Query: 158 KA 159
           +A
Sbjct: 151 RA 152


>gi|90409249|ref|ZP_01217354.1| ribonucleotide-diphosphate reductase beta subunit [Psychromonas sp.
           CNPT3]
 gi|90309647|gb|EAS37827.1| ribonucleotide-diphosphate reductase beta subunit [Psychromonas sp.
           CNPT3]
          Length = 381

 Score = 91.4 bits (226), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P E+ +  D   +     L   E+ +   NL +    +S+  
Sbjct: 33  KFEVFEKLIEKQLSFFWRPEEIDVSRDRIDF---MNLPSHEQHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +I+ +L  D  E+F        I  
Sbjct: 90  RSPNMALLPIVSLPELETWIETWSFSETIHSRSYTHILRNLFTDPSEVFEDIVTNVEIQK 149

Query: 158 KANWALQYTQTL 169
           +A+   QY   L
Sbjct: 150 RASDIAQYYDAL 161


>gi|18466786|ref|NP_569593.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. CT18]
 gi|16506102|emb|CAD09988.1| putative ribonucleoside-diphosphate reductase beta subunit
           [Salmonella enterica subsp. enterica serovar Typhi str.
           CT18]
          Length = 380

 Score = 91.4 bits (226), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 2/122 (1%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   + +K  L + ER +   NL +    +S+  
Sbjct: 33  KYRDFEKLIEKQLSFFWRPEEVDITTDRIDFNTK--LQEHERHIFLSNLRYQTLLDSVQG 90

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +    +   +S PE   ++   +F E +HS ++ +II  +  D   +F+       I +
Sbjct: 91  RSPNATLLPLISIPELETWVETWSFSETIHSRSYTHIIRGMVDDPSIVFDGIVTDEEIIS 150

Query: 158 KA 159
           +A
Sbjct: 151 RA 152


>gi|114563305|ref|YP_750818.1| ribonucleotide-diphosphate reductase subunit beta [Shewanella
           frigidimarina NCIMB 400]
 gi|114334598|gb|ABI71980.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Shewanella frigidimarina NCIMB 400]
          Length = 376

 Score = 91.1 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 56/136 (41%), Gaps = 3/136 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   +     L + E+ +   NL +    +S+  
Sbjct: 33  KYEVFEKLIEKQLSFFWRPEEVDVSRDKIDF---GNLPEHEQHIFLSNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A    +S PE   ++   +F E +HS ++ +II ++  +   +F+   +   I  
Sbjct: 90  RSPNVAFLPLVSLPELETWIETWSFSETIHSRSYTHIIRNIVNNPSLVFDDIVQNDEILK 149

Query: 158 KANWALQYTQTLSSPS 173
           +A     Y   L + +
Sbjct: 150 RAGDIAAYYDDLINLT 165


>gi|329119976|ref|ZP_08248648.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           bacilliformis ATCC BAA-1200]
 gi|327463889|gb|EGF10203.1| ribonucleotide-diphosphate reductase beta subunit [Neisseria
           bacilliformis ATCC BAA-1200]
          Length = 384

 Score = 91.1 bits (225), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 57/132 (43%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P E+ +  D   + +   L + E+ +   NL +    +S+  
Sbjct: 40  KFEVFEKLIEKQLSFFWRPEEIDVSRDRIDYAN---LPEHEKHIFISNLKYQTLLDSIQG 96

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+   +   I A
Sbjct: 97  RSPNVALLPLVSIPELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVQNEYIIA 156

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 157 RAEDIACYYDDL 168


>gi|237747538|ref|ZP_04578018.1| ribonucleotide-diphosphate reductase subunit beta [Oxalobacter
           formigenes OXCC13]
 gi|229378900|gb|EEO28991.1| ribonucleotide-diphosphate reductase subunit beta [Oxalobacter
           formigenes OXCC13]
          Length = 376

 Score = 91.1 bits (225), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 56/132 (42%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 33  KHEVFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+      +I  
Sbjct: 90  RSPNVALLPLVSIPELETWIETWSFSETIHSRSYTHIIRNIVNDPAIVFDDIVSNENIVR 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RATDISVYYDDL 161


>gi|54309624|ref|YP_130644.1| ribonucleotide-diphosphate reductase subunit beta [Photobacterium
           profundum SS9]
 gi|46914062|emb|CAG20842.1| putative ribonucleoside-diphosphate reductase,beta subunit
           [Photobacterium profundum SS9]
          Length = 377

 Score = 91.1 bits (225), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 3/122 (2%)

Query: 48  SACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRH 107
              +  W P EV +  D   +   N L D E+ +   NL +    +S+   +  +A+   
Sbjct: 43  KQLSFFWRPEEVDVSGDRIDY---NNLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPI 99

Query: 108 LSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQ 167
           +S PE   ++   +F E +HS ++ +II ++  D   +F+   E   I  +A    +Y  
Sbjct: 100 VSIPELETWIETWSFSETIHSRSYTHIIRNIVNDPAIVFDDIVENEYIIKRAGDISKYYD 159

Query: 168 TL 169
            L
Sbjct: 160 DL 161


>gi|153820502|ref|ZP_01973169.1| ribonucleoside-diphosphate reductase 1 subunit beta [Vibrio
           cholerae NCTC 8457]
 gi|126508955|gb|EAZ71549.1| ribonucleoside-diphosphate reductase 1 subunit beta [Vibrio
           cholerae NCTC 8457]
          Length = 155

 Score = 91.1 bits (225), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 61/150 (40%), Gaps = 3/150 (2%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
              +K   + +   L    +V +    KY    +      +  W P EV +  D   +  
Sbjct: 6   FTQKKNDQLKEPMFLGQPVNVARYDQQKYEIFEKLIEKQLSFFWRPEEVDVSSDRIDY-- 63

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
              L D E+ +   NL +    +S+   +  +A+   +S PE   ++   +F E +HS +
Sbjct: 64  -GKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPELETWIETWSFSETIHSRS 122

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKAN 160
           + +II ++  D   +F+   E   I  +A 
Sbjct: 123 YTHIIRNIVNDPAVVFDDIVENEHIIKRAK 152


>gi|42543287|pdb|1PJ0|A Chain A, Ribonucleotide Reductase R2-D84eW48F MUTANT SOAKED WITH
           Ferrous Ions At Neutral Ph
 gi|42543288|pdb|1PJ0|B Chain B, Ribonucleotide Reductase R2-D84eW48F MUTANT SOAKED WITH
           Ferrous Ions At Neutral Ph
 gi|42543289|pdb|1PJ1|A Chain A, Ribonucleotide Reductase R2-D84eW48F SOAKED WITH FERROUS
           Ions At Ph 5
 gi|42543290|pdb|1PJ1|B Chain B, Ribonucleotide Reductase R2-D84eW48F SOAKED WITH FERROUS
           Ions At Ph 5
          Length = 375

 Score = 90.7 bits (224), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  + P EV +  D   ++    L + E+ +   NL +    ES+  
Sbjct: 32  KYDIFEKLIEKQLSFFFRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLESIQG 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   AF E +HS ++ +II ++  D   +F+       I  
Sbjct: 89  RSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQK 148

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 149 RAEGISSYYDEL 160


>gi|269963956|ref|ZP_06178265.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio harveyi
           1DA3]
 gi|269831299|gb|EEZ85449.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio harveyi
           1DA3]
          Length = 377

 Score = 90.7 bits (224), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 63/159 (39%), Gaps = 3/159 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
               K   + +   L    +V +    K+    +      +  W P EV +  D   +  
Sbjct: 6   FNQNKNDQLKEPMFLGQSVNVARYDQQKFEIFEKLIEKQLSFFWRPEEVDVSSDRIDY-- 63

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            N L D E+ +   NL +    +S+   +  +A+   +S PE   ++   +F E +HS +
Sbjct: 64  -NKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPELETWIETWSFSETIHSRS 122

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           + +II ++  D   +F+   E   I  +A     Y   L
Sbjct: 123 YTHIIRNIVNDPSVVFDDIVENEHILKRAKDIAHYYDDL 161


>gi|28898709|ref|NP_798314.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|153839553|ref|ZP_01992220.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus AQ3810]
 gi|260363692|ref|ZP_05776476.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus K5030]
 gi|260879741|ref|ZP_05892096.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus AN-5034]
 gi|260898785|ref|ZP_05907226.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus Peru-466]
 gi|260901598|ref|ZP_05909993.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus AQ4037]
 gi|28806927|dbj|BAC60198.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|149746934|gb|EDM57922.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus AQ3810]
 gi|308086689|gb|EFO36384.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus Peru-466]
 gi|308093260|gb|EFO42955.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus AN-5034]
 gi|308108691|gb|EFO46231.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus AQ4037]
 gi|308113401|gb|EFO50941.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus K5030]
          Length = 377

 Score = 90.7 bits (224), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 63/159 (39%), Gaps = 3/159 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
               K   + +   L    +V +    K+    +      +  W P EV +  D   +  
Sbjct: 6   FNQNKNDQLKEPMFLGQSVNVARYDQQKFEIFEKLIEKQLSFFWRPEEVDVSSDRIDY-- 63

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            N L D E+ +   NL +    +S+   +  +A+   +S PE   ++   +F E +HS +
Sbjct: 64  -NKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPELETWIETWSFSETIHSRS 122

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           + +II ++  D   +F+   E   I  +A     Y   L
Sbjct: 123 YTHIIRNIVNDPSVVFDDIVENEHILKRAKDIAHYYDDL 161


>gi|21672460|ref|NP_660527.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. Sg (Schizaphis graminum)]
 gi|25091143|sp|Q8K9W4|RIR2_BUCAP RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|21623075|gb|AAM67738.1| ribonucleoside-diphosphate reductase 1 beta chain [Buchnera
           aphidicola str. Sg (Schizaphis graminum)]
          Length = 376

 Score = 90.7 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 63/159 (39%), Gaps = 3/159 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
            + +K   + +        ++ +    KY    +      +  W P E+ +  D   +  
Sbjct: 6   FSKKKNNQLKEPMFFGQSVNIARYDQQKYNIFEKLIEKQLSFFWRPEEIDLSKDRIDF-- 63

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            + L  +E+ +   NL +    +S+   +  +A    +S PE   ++   +F E +HS +
Sbjct: 64  -DNLPSNEKHIFISNLKYQTLLDSIQGRSPNIAFLPIVSIPELETWIETWSFSETIHSRS 122

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           + +II ++  +   +F+      +I  +A     Y   L
Sbjct: 123 YTHIIRNIINNPSIVFDDIISNKNINDRAQDISIYYDEL 161


>gi|15616797|ref|NP_240009.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. APS (Acyrthosiphon pisum)]
 gi|219681552|ref|YP_002467937.1| ribonucleotide-diphosphate reductase beta subunit [Buchnera
           aphidicola str. 5A (Acyrthosiphon pisum)]
 gi|219682108|ref|YP_002468492.1| ribonucleotide-diphosphate reductase beta subunit [Buchnera
           aphidicola str. Tuc7 (Acyrthosiphon pisum)]
 gi|257471235|ref|ZP_05635234.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. LSR1 (Acyrthosiphon pisum)]
 gi|11134533|sp|P57275|RIR2_BUCAI RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|25285834|pir||G84950 ribonucleoside-diphosphate reductase (EC 1.17.4.1) nrdB [imported]
           - Buchnera sp. (strain APS)
 gi|10038860|dbj|BAB12895.1| ribonucleoside-diphosphate reductase 1 beta chain [Buchnera
           aphidicola str. APS (Acyrthosiphon pisum)]
 gi|219621841|gb|ACL29997.1| ribonucleotide-diphosphate reductase beta subunit [Buchnera
           aphidicola str. Tuc7 (Acyrthosiphon pisum)]
 gi|219624395|gb|ACL30550.1| ribonucleotide-diphosphate reductase beta subunit [Buchnera
           aphidicola str. 5A (Acyrthosiphon pisum)]
 gi|311087074|gb|ADP67154.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. JF99 (Acyrthosiphon pisum)]
          Length = 376

 Score = 90.7 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 67/164 (40%), Gaps = 3/164 (1%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWK 69
           I + +K   + +        ++ +    KY    +      +  W P E+ +  D   ++
Sbjct: 5   IFSKKKNNQLKEPMFFGQPVNIARYDQQKYKIFEQLIEKQLSFFWRPEEIDLSRDRIDFQ 64

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
           +   L D+E+ +   NL +    +S+   +  +A    +S PE   ++   +F E +HS 
Sbjct: 65  N---LPDNEKHIFISNLKYQTLLDSIQGRSPNIAFLPIISIPELETWIETWSFSETIHSR 121

Query: 130 TFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPS 173
           ++ +II ++      +F+      +I  +A     Y   L + +
Sbjct: 122 SYTHIIRNIVNCPSLVFDDIISNKNIYDRAQNISIYYDELINLT 165


>gi|328474726|gb|EGF45531.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio
           parahaemolyticus 10329]
          Length = 377

 Score = 90.7 bits (224), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 63/159 (39%), Gaps = 3/159 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
               K   + +   L    +V +    K+    +      +  W P EV +  D   +  
Sbjct: 6   FNQNKNDQLKEPMFLGQSVNVARYDQQKFEIFEKLIEKQLSFFWRPEEVDVSSDRIDY-- 63

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            N L D E+ +   NL +    +S+   +  +A+   +S PE   ++   +F E +HS +
Sbjct: 64  -NKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPELETWIETWSFSETIHSRS 122

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           + +II ++  D   +F+   E   I  +A     Y   L
Sbjct: 123 YTHIIRNIVNDPSVVFDDIVENEHILKRAKDIAHYYDDL 161


>gi|156975012|ref|YP_001445919.1| ribonucleotide-diphosphate reductase subunit beta [Vibrio harveyi
           ATCC BAA-1116]
 gi|156526606|gb|ABU71692.1| hypothetical protein VIBHAR_02734 [Vibrio harveyi ATCC BAA-1116]
          Length = 377

 Score = 90.3 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 63/159 (39%), Gaps = 3/159 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
               K   + +   L    +V +    K+    +      +  W P EV +  D   +  
Sbjct: 6   FNQNKNDQLKEPMFLGQSVNVARYDQQKFEIFEKLIEKQLSFFWRPEEVDVSSDRIDY-- 63

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            N L D E+ +   NL +    +S+   +  +A+   +S PE   ++   +F E +HS +
Sbjct: 64  -NKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPELETWIETWSFSETIHSRS 122

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           + +II ++  D   +F+   E   I  +A     Y   L
Sbjct: 123 YTHIIRNIVNDPSVVFDDIVENEHILKRAKDIAHYYDDL 161


>gi|149190928|ref|ZP_01869191.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio shilonii
           AK1]
 gi|148835283|gb|EDL52257.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio shilonii
           AK1]
          Length = 377

 Score = 90.3 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 3/122 (2%)

Query: 48  SACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRH 107
              +  W P EV +  D   +   N L + E+ +   NL +    +S+   +  +A+   
Sbjct: 43  KQLSFFWRPEEVDVSSDRIDY---NKLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPL 99

Query: 108 LSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQ 167
           +S PE   ++   +F E +HS ++ +II ++  D G +F+   E   I  +A     Y  
Sbjct: 100 VSLPELETWIETWSFSETIHSRSYTHIIRNIVNDPGVVFDDIVENEHILKRAKDIAHYYD 159

Query: 168 TL 169
            L
Sbjct: 160 DL 161


>gi|118602534|ref|YP_903749.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Ruthia magnifica str. Cm (Calyptogena magnifica)]
 gi|118567473|gb|ABL02278.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Candidatus Ruthia magnifica str. Cm (Calyptogena
           magnifica)]
          Length = 378

 Score = 90.3 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 60/147 (40%), Gaps = 3/147 (2%)

Query: 23  RMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMI 82
                  +V +    K+    +      +  W P E+ +  D   +   + L  +E+ + 
Sbjct: 18  MFFGDSMNVTRFDKQKFEIFEKLTEKQLSFFWRPEEIDVSKDKIDF---SKLLPNEKHIF 74

Query: 83  KRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE 142
             NL +    +S+      +A    +S PE   ++   +F E +HS ++ +II ++  + 
Sbjct: 75  VSNLQYQILLDSVQGRAPNIAFLPIVSLPEVENWIETWSFSETIHSRSYTHIIRAIINEP 134

Query: 143 GELFNMYREVPSITAKANWALQYTQTL 169
           G +F+   +   I  +A  A ++   L
Sbjct: 135 GVIFDDIMKTDEIIQRAESASKHYDGL 161


>gi|319760602|ref|YP_004124540.1| ribonucleoside-diphosphate reductase 1 subunit beta [Candidatus
           Blochmannia vafer str. BVAF]
 gi|318039316|gb|ADV33866.1| ribonucleoside-diphosphate reductase 1 subunit beta [Candidatus
           Blochmannia vafer str. BVAF]
          Length = 376

 Score = 90.3 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 63/156 (40%), Gaps = 3/156 (1%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           +K   + +   L    ++ +    K+    +      +  W P E+ +  D   ++S   
Sbjct: 9   KKNNQLLEPMFLGQPVNIVRFDQQKHIIFEKLIEKQLSFFWRPEEIDISKDRIDYQS--- 65

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           L D E+ +   NL +    +S+   +  +A+   +S PE   ++   +F E +HS ++ +
Sbjct: 66  LPDHEKHIFISNLKYQTLLDSIQGRSPNIALLPLISIPELETWVETWSFFETIHSRSYTH 125

Query: 134 IITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           II ++      +F+       I  +A     Y   L
Sbjct: 126 IIRNIVTHPSSVFDDIVTNKEILKRAKDISIYYDDL 161


>gi|157311531|ref|YP_001469574.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           Phi1]
 gi|149380735|gb|ABR24740.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           Phi1]
          Length = 386

 Score = 90.3 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 61/164 (37%), Gaps = 12/164 (7%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           ++    E      +  W P E+ +  D   +     + D E+     NL +    +S+  
Sbjct: 31  RHQVFEELIEKQLSFFWRPEEISLATDRIQY---LNMGDVEKRFFTENLKYQTLLDSIQG 87

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
                A    +S+P    +L    F E +HS ++ +I+ +  +D    F+   + P+I  
Sbjct: 88  RAPSAAFGPIVSDPTLDTWLQTWTFSETIHSRSYTHIMRNCFIDPASEFDQIIDNPAIMK 147

Query: 158 KANWALQYTQTL---------SSPSFHYWNKRRRSRILTRSLRF 192
           +A    QY   +         +     YW +R     L  + RF
Sbjct: 148 RAESIGQYYDDVLYWIRKYENAKEDLRYWEERDDHTALDDARRF 191


>gi|153835812|ref|ZP_01988479.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio harveyi
           HY01]
 gi|148867435|gb|EDL66832.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio harveyi
           HY01]
          Length = 377

 Score = 90.3 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 63/159 (39%), Gaps = 3/159 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
               K   + +   L    +V +    K+    +      +  W P EV +  D   +  
Sbjct: 6   FNQNKNDQLKEPMFLGQSVNVARYDQQKFEIFEKLIEKQLSFFWRPEEVDVSSDRIDY-- 63

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            N L + E+ +   NL +    +S+   +  +A+   +S PE   ++   +F E +HS +
Sbjct: 64  -NKLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPELETWIETWSFSETIHSRS 122

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           + +II ++  D   +F+   E   I  +A     Y   L
Sbjct: 123 YTHIIRNIVNDPSVVFDDIVENEHILKRAKDIAHYYDDL 161


>gi|90412217|ref|ZP_01220223.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
           profundum 3TCK]
 gi|90326941|gb|EAS43326.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
           profundum 3TCK]
          Length = 377

 Score = 90.3 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 54/122 (44%), Gaps = 3/122 (2%)

Query: 48  SACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRH 107
              +  W P EV +  D   +   N L + E+ +   NL +    +S+   +  +A+   
Sbjct: 43  KQLSFFWRPEEVDVSGDRIDY---NNLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPI 99

Query: 108 LSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQ 167
           +S PE   ++   +F E +HS ++ +II ++  D   +F+   E   I  +A    +Y  
Sbjct: 100 VSIPELETWIETWSFSETIHSRSYTHIIRNIVNDPAIVFDDIVENDYIIKRAGDISKYYD 159

Query: 168 TL 169
            L
Sbjct: 160 DL 161


>gi|163803511|ref|ZP_02197381.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp. AND4]
 gi|159172687|gb|EDP57538.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp. AND4]
          Length = 377

 Score = 90.3 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 63/159 (39%), Gaps = 3/159 (1%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
               K   + +   L    +V +    K+    +      +  W P EV +  D   +  
Sbjct: 6   FNQNKNDQLKEPMFLGQSVNVARYDQQKFEIFEKLIEKQLSFFWRPEEVDVSSDRIDY-- 63

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHT 130
            N L D E+ +   NL +    +S+   +  +A+   +S PE   ++   +F E +HS +
Sbjct: 64  -NKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPIVSLPELETWIETWSFSETIHSRS 122

Query: 131 FQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           + +II ++  D   +F+   E   I  +A     Y   L
Sbjct: 123 YTHIIRNIVNDPSVVFDDIVENEHILKRAKDIAHYYDDL 161


>gi|311085920|gb|ADP66002.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. LL01 (Acyrthosiphon pisum)]
 gi|311086491|gb|ADP66572.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. TLW03 (Acyrthosiphon pisum)]
 gi|311087626|gb|ADP67705.1| ribonucleotide-diphosphate reductase subunit beta [Buchnera
           aphidicola str. JF98 (Acyrthosiphon pisum)]
          Length = 359

 Score = 89.9 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 58/136 (42%), Gaps = 3/136 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P E+ +  D   +++   L D+E+ +   NL +    +S+  
Sbjct: 16  KYKIFEQLIEKQLSFFWRPEEIDLSRDRIDFQN---LPDNEKHIFISNLKYQTLLDSIQG 72

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A    +S PE   ++   +F E +HS ++ +II ++      +F+      +I  
Sbjct: 73  RSPNIAFLPIISIPELETWIETWSFSETIHSRSYTHIIRNIVNCPSLVFDDIISNKNIYD 132

Query: 158 KANWALQYTQTLSSPS 173
           +A     Y   L + +
Sbjct: 133 RAQNISIYYDELINLT 148


>gi|312262463|gb|ADQ52758.1| NrdB aerobic NDP reductase small subunit [Aeromonas phage PX29]
          Length = 376

 Score = 89.9 bits (222), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 59/133 (44%), Gaps = 3/133 (2%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           +K+    +    + +  W P EV +  D   +   + L++ E+ +  +NL + +  +S+ 
Sbjct: 31  VKHPAIDKLTERSLSFFWRPEEVDLSKDAIDY---SRLSEQEQYVFTQNLKYQSLLDSVQ 87

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSIT 156
                L     +S+     ++   +F E +HS ++ +I+ +L +D   +F+       I 
Sbjct: 88  GRAPNLVFLPIVSDVALETWITTWSFSETIHSRSYTHIMRNLYVDPSAVFDRILLDAKIM 147

Query: 157 AKANWALQYTQTL 169
           A+A    QY   L
Sbjct: 148 ARATSVTQYYDDL 160


>gi|269102947|ref|ZP_06155644.1| ribonucleotide reductase of class Ia (aerobic) beta subunit
           [Photobacterium damselae subsp. damselae CIP 102761]
 gi|268162845|gb|EEZ41341.1| ribonucleotide reductase of class Ia (aerobic) beta subunit
           [Photobacterium damselae subsp. damselae CIP 102761]
          Length = 377

 Score = 88.7 bits (219), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 58/136 (42%), Gaps = 3/136 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P EV +  D   +   N L D E+ +   NL +    +S+  
Sbjct: 33  KFEIFEKLIEKQLSFFWRPEEVDVSGDRIDY---NNLPDHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F+       I  
Sbjct: 90  RSPNVALLPIVSLPELETWIETWSFSETIHSRSYTHIIRNIVNDPAIVFDDIVSNEYIIK 149

Query: 158 KANWALQYTQTLSSPS 173
           +A    +Y   L S +
Sbjct: 150 RAGDISRYYDELISAT 165


>gi|164688728|ref|ZP_02212756.1| hypothetical protein CLOBAR_02375 [Clostridium bartlettii DSM
           16795]
 gi|164602204|gb|EDQ95669.1| hypothetical protein CLOBAR_02375 [Clostridium bartlettii DSM
           16795]
          Length = 327

 Score = 88.7 bits (219), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 62/150 (41%), Gaps = 6/150 (4%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W+P E+ +  D+ +W   + L+ +ER + K+ LG     ++  ANN + ++
Sbjct: 25  FWDQNVKQFWLPEEISVSKDVKVW---SELSPEERNLYKKVLGGLTLLDTKQANNGIPSM 81

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANWA 162
                N + +  L      E +H+ ++  I T+L    +  E+F      P++  KA   
Sbjct: 82  MSLTDNLQRKAVLSFMGTMEEIHAKSYSSIFTTLLTVPEIDEIFEWIESEPTLQKKAEIV 141

Query: 163 LQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           L   +  +   +  +     S  L   L +
Sbjct: 142 LAQYEN-TDDRYGLYMSMATSVFLESFLFY 170


>gi|330858746|ref|YP_004415121.1| putative ribonucleotide reductase B subunit [Shigella phage Shfl2]
 gi|327397680|gb|AEA73182.1| putative ribonucleotide reductase B subunit [Shigella phage Shfl2]
          Length = 389

 Score = 88.4 bits (218), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 58/145 (40%), Gaps = 3/145 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           ++    +      +  W P EV +  D A +   N L   ++ +   NL + +  +S+  
Sbjct: 32  RHKVFEDLTEKQLSFFWRPEEVNLMMDAAQF---NKLPQYQQDIFTNNLKYQSLLDSIQG 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
                 +   +S+P    ++    F E +HS ++ +I+ +L  D  ++F+      +I  
Sbjct: 89  RAPSAVLMSLISDPSLDTWVATWTFSETIHSRSYTHIMRNLYTDPSKVFDEIVLDKAIMK 148

Query: 158 KANWALQYTQTLSSPSFHYWNKRRR 182
           +A    +Y   +   +  Y N    
Sbjct: 149 RAESIGRYYDDVLVKTREYQNAVED 173


>gi|148244629|ref|YP_001219323.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Vesicomyosocius okutanii HA]
 gi|146326456|dbj|BAF61599.1| ribonucleoside-diphosphate reductase beta subunit [Candidatus
           Vesicomyosocius okutanii HA]
          Length = 378

 Score = 88.4 bits (218), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 64/149 (42%), Gaps = 4/149 (2%)

Query: 22  KRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           + M    + +V +    K+    +      +  W P E+ +  D   +     L  +E+ 
Sbjct: 16  EPMFFGNTVNVARFDKQKFEIFEKLTEKQLSFFWRPEEIDVSKDKIDFAK---LLPNEKH 72

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
           +   NL +    +S+ + +  +A    +S PE   ++   +F E +HS ++ +II ++  
Sbjct: 73  IFISNLQYQILLDSVQSRSPNIAFLPIVSLPELENWIETWSFSETIHSRSYTHIIRAIVN 132

Query: 141 DEGELFNMYREVPSITAKANWALQYTQTL 169
           + G +F+   ++  I  +A    ++   L
Sbjct: 133 EPGIVFDDIMKIDEIIQRAESVSKHYNEL 161


>gi|71892252|ref|YP_277986.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Blochmannia pennsylvanicus str. BPEN]
 gi|71796358|gb|AAZ41109.1| ribonucleoside-diphosphate reductase 1, beta subunit [Candidatus
           Blochmannia pennsylvanicus str. BPEN]
          Length = 376

 Score = 88.0 bits (217), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P E+ +  D   ++S   L D E+ +   NL +    +S+  
Sbjct: 33  KHSIFEKLIEKQLSFFWRPEEIDISKDRIDFQS---LPDHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++      +F+       I  
Sbjct: 90  RSPNIALLPLISIPELEIWVETWSFFETIHSRSYTHIIRNIVNHPSLIFDDIISNKEILK 149

Query: 158 KANWALQYTQTL 169
           +A     Y   L
Sbjct: 150 RAKDISTYYDNL 161


>gi|295698298|ref|YP_003602953.1| ribonucleoside-diphosphate reductase, beta subunit [Candidatus
           Riesia pediculicola USDA]
 gi|291156973|gb|ADD79418.1| ribonucleoside-diphosphate reductase, beta subunit [Candidatus
           Riesia pediculicola USDA]
          Length = 375

 Score = 88.0 bits (217), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 59/144 (40%), Gaps = 4/144 (2%)

Query: 18  NVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           +   + M      ++++    KY           +  W P E+ +  D   ++S   L  
Sbjct: 11  DPLKEPMFFGNHVNISRFDQQKYSIFETLTEKQLSFFWRPEEIDISKDRIDYQS---LKL 67

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
            E+ +  RNL +    +S+ + +   A    +S PE   ++   +F E +HS ++ YII 
Sbjct: 68  YEKKIFIRNLQYQILLDSIQSRSPNCAFLPIVSLPEVENWIETWSFSETIHSRSYTYIIR 127

Query: 137 SLGLDEGELFNMYREVPSITAKAN 160
           ++  D   +F+       I  +A 
Sbjct: 128 NIIDDPSLIFDKIVSNQEIIDRAK 151


>gi|119944866|ref|YP_942546.1| ribonucleotide-diphosphate reductase subunit beta [Psychromonas
           ingrahamii 37]
 gi|119863470|gb|ABM02947.1| ribonucleoside-diphosphate reductase class Ia beta subunit
           [Psychromonas ingrahamii 37]
          Length = 381

 Score = 88.0 bits (217), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 51/122 (41%), Gaps = 3/122 (2%)

Query: 48  SACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRH 107
              +  W P E+ +  D   +     L D E+ +   NL +    +S+   +  +A+   
Sbjct: 43  KQLSFFWRPEEIDVSRDRIDF---LNLPDHEQHIFISNLKYQTLLDSIQGRSPNIALLPI 99

Query: 108 LSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQ 167
           +S PE   ++   +F E +HS ++ +I+ +L  +  E+F        I  +A     Y  
Sbjct: 100 VSLPELETWIETWSFSETIHSRSYTHILRNLFTEPAEIFEDIVTNVEIQKRATDISGYYD 159

Query: 168 TL 169
            L
Sbjct: 160 AL 161


>gi|33519930|ref|NP_878762.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Blochmannia floridanus]
 gi|33504276|emb|CAD83168.1| ribonucleoside-diphosphate reductase 1 beta chain [Candidatus
           Blochmannia floridanus]
          Length = 376

 Score = 87.6 bits (216), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 59/142 (41%), Gaps = 3/142 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P E+ +  D   ++S   L + E+ +   NL +    +S+  
Sbjct: 33  KHIIFEKLIEKQLSFFWRPEEIDISKDRIDYQS---LPNHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++      +F+       I  
Sbjct: 90  RSPNIALLPLISIPELETWVETWSFFETIHSRSYTHIIRNIVNHPSVIFDDIVTNKEILK 149

Query: 158 KANWALQYTQTLSSPSFHYWNK 179
           +A     Y   L   + +Y+  
Sbjct: 150 RAKDISMYYDDLIKLTNYYYTL 171


>gi|269864946|ref|XP_002651751.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|269865852|ref|XP_002652068.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|269866233|ref|XP_002652201.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220062966|gb|EED41855.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063214|gb|EED41988.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063944|gb|EED42305.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 226

 Score = 87.6 bits (216), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 16/83 (19%)

Query: 115 QYLLRQAFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSS 171
            +   Q   E +HS  +  +I +L  D+ E   LFN    +PSI  KA WA ++  +   
Sbjct: 1   MFYGFQIAIENIHSEMYSKLIETLIRDKEEQTYLFNAIENIPSIRKKALWAQKWIAS--- 57

Query: 172 PSFHYWNKRRRSRILTRSLRFLC 194
                      +   TR + F C
Sbjct: 58  ----------DTSFDTRCVAFAC 70


>gi|330445621|ref|ZP_08309273.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328489812|dbj|GAA03770.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 377

 Score = 87.2 bits (215), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 54/122 (44%), Gaps = 3/122 (2%)

Query: 48  SACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRH 107
              +  W P EV +  D     + N L D E+ +   NL +    +S+   +  +A+   
Sbjct: 43  KQLSFFWRPEEVDVSGDRI---NYNNLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPI 99

Query: 108 LSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQ 167
           +S PE   ++   +F E +HS ++ +II ++  +   +F+   E   I  +A    +Y  
Sbjct: 100 VSIPELETWIETWSFSETIHSRSYTHIIRNIVNNPSVVFDDIVENEHIIKRAGDISKYYD 159

Query: 168 TL 169
            L
Sbjct: 160 AL 161


>gi|90581239|ref|ZP_01237037.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio angustum
           S14]
 gi|90437610|gb|EAS62803.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio angustum
           S14]
          Length = 377

 Score = 86.8 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 59/136 (43%), Gaps = 3/136 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P EV +  D     + N L D E+ +   NL +    +S+  
Sbjct: 33  KFEIFEKLIEKQLSFFWRPEEVDVSGDRI---NYNNLPDHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  +   +F+   E   I  
Sbjct: 90  RSPNVALLPIVSLPELETWIETWSFSETIHSRSYTHIIRNIVNNPSVVFDDIVENEHIIK 149

Query: 158 KANWALQYTQTLSSPS 173
           +A    +Y   L S +
Sbjct: 150 RAGDISKYYDALISAT 165


>gi|89074073|ref|ZP_01160574.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
           sp. SKA34]
 gi|89050211|gb|EAR55722.1| ribonucleotide-diphosphate reductase beta subunit [Photobacterium
           sp. SKA34]
          Length = 377

 Score = 86.8 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 57/132 (43%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+    +      +  W P EV +  D     + N L D E+ +   NL +    +S+  
Sbjct: 33  KFEIFEKLIEKQLSFFWRPEEVDVSGDRI---NYNNLPDHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +  +A+   +S PE   ++   +F E +HS ++ +II ++  +   +F+   E   I  
Sbjct: 90  RSPNVALLPIVSLPELETWIETWSFSETIHSRSYTHIIRNIVNNPSVVFDDIVENEHIVK 149

Query: 158 KANWALQYTQTL 169
           +A    +Y   L
Sbjct: 150 RAGDISKYYDDL 161


>gi|284504289|ref|YP_003407004.1| ribonucleotide reductase small chain [Marseillevirus]
 gi|282935727|gb|ADB04042.1| ribonucleotide reductase small chain [Marseillevirus]
          Length = 280

 Score = 86.8 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 8/108 (7%)

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS--NPECRQYLLRQAF 122
           ++ W   + LT  E+  +K  L FFA  + +V  N+V    + +S    E   + + QA 
Sbjct: 1   MSDW---SKLTKGEKKFVKLELAFFAQFDGIVVENLVRNFQQEVSSYAKEIEWFYILQAA 57

Query: 123 EEAVHSHTFQYIITSL---GLDEGELFNMYREVPSITAKANWALQYTQ 167
            E +H+ T+  +I +L        +  +     PSI   ANW  ++  
Sbjct: 58  NELIHNETYMNLIDNLLPSPKKREKALDAISNYPSIRLIANWVERWMD 105


>gi|258597037|ref|XP_001347439.2| ribonucleotide reductase small subunit, putative [Plasmodium
           falciparum 3D7]
 gi|254922415|gb|AAN35352.2| ribonucleotide reductase small subunit, putative [Plasmodium
           falciparum 3D7]
          Length = 335

 Score = 86.4 bits (213), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 55/158 (34%), Gaps = 15/158 (9%)

Query: 20  DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER 79
           ++  +L        + P+KY   W  Y    +  W   +     D      K  L + ++
Sbjct: 17  NNDEILKENKFRWVMFPIKYKTFWSYYKEIESLFWTAEDYNFDKD------KQYLENIDK 70

Query: 80  LMIKRNLG---FFASSESLVANN---IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
            M+ +      F++  +  V      I   +   +  PE R +   Q   E +H   +  
Sbjct: 71  NMLVKLFELICFYSLKDLHVYEEQALITSKMLDIIQIPEGRAFYGFQMCMENIHDEVYAC 130

Query: 134 IITSLGLDEGE---LFNMYREVPSITAKANWALQYTQT 168
           I  +   D  +   + N   E+ S+  K  W  +  ++
Sbjct: 131 IFETYIPDSKQKRVIINKVIELDSVLKKQKWLTEIFES 168


>gi|228861159|ref|YP_002854182.1| ribonucleotide reductase B subunit [Enterobacteria phage RB51]
 gi|227438833|gb|ACP31145.1| ribonucleotide reductase B subunit [Enterobacteria phage RB51]
          Length = 392

 Score = 86.1 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 60/152 (39%), Gaps = 3/152 (1%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           ++    +      +  W P EV +  D A +   N L   ++ +   NL + +  +S+  
Sbjct: 32  RHKVFEDLTEKQLSFFWRPEEVNLMMDAAQF---NKLPQYQQNIFTNNLKYQSLLDSIQG 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
                 +   +S+P    ++    F E +HS ++ +I+ +L  D  ++F+      +I  
Sbjct: 89  RAPSAVLMSLISDPSLDTWVATWTFSETIHSRSYTHIMRNLYTDPSKVFDEIVLDKAIMK 148

Query: 158 KANWALQYTQTLSSPSFHYWNKRRRSRILTRS 189
           +A    +Y   +   + ++ N +         
Sbjct: 149 RAESIGRYYDDVIEKTRYWQNAKADIEYQKEI 180


>gi|304406354|ref|ZP_07388010.1| Ribonucleoside-diphosphate reductase [Paenibacillus curdlanolyticus
           YK9]
 gi|304344412|gb|EFM10250.1| Ribonucleoside-diphosphate reductase [Paenibacillus curdlanolyticus
           YK9]
          Length = 318

 Score = 86.1 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 52/130 (40%), Gaps = 5/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W   E+P+ DD   W     L+D +R +  + LG     +++     +  I
Sbjct: 19  FWNQNIMQFWTDEEIPLSDDKMSW---IELSDAQRELYMKVLGGLTLLDTIQGGVGIPKI 75

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             H+   + +  L      E +H+ ++  I T+L   E    +F   +  P +  KA W 
Sbjct: 76  VEHVDGLQRKAVLSFMGMMEQIHAKSYSSIFTTLASTEEIDGVFAWVKTQPQLQNKAEWI 135

Query: 163 LQYTQTLSSP 172
             Y   +++P
Sbjct: 136 SVYYNNITTP 145


>gi|291290450|dbj|BAI83245.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage
           AR1]
          Length = 392

 Score = 85.7 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 60/152 (39%), Gaps = 3/152 (1%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           ++    +      +  W P EV +  D A +   N L   ++ +   NL + +  +S+  
Sbjct: 32  RHKVFEDLTEKQLSFFWRPEEVNLMMDAAQF---NKLPQYQQNIFTNNLKYQSLLDSIQG 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
                 +   +S+P    ++    F E +HS ++ +I+ +L  D  ++F+      +I  
Sbjct: 89  RAPSAVLMSLISDPSLDTWVATWTFSETIHSRSYTHIMRNLYTDPSKVFDEIVLDEAIMK 148

Query: 158 KANWALQYTQTLSSPSFHYWNKRRRSRILTRS 189
           +A    +Y   +   + ++ N +         
Sbjct: 149 RAESIGRYYDDVLIKTRYWENAKADIEYQKEI 180


>gi|32709427|gb|AAP86732.1| NrdB [Enterobacteria phage RB3]
          Length = 258

 Score = 85.7 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 61/152 (40%), Gaps = 3/152 (1%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           ++    +      +  W P EV +  D A +   N L   ++ +   NL + +  +S+  
Sbjct: 32  RHKVFEDLTEKQLSFFWRPEEVNLMMDAAQF---NKLPQYQQNIFTNNLKYQSLLDSIQG 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
                 +   +S+P    ++    F E +HS ++ +I+ +L  D  ++F+      +I  
Sbjct: 89  RAPSAVLMSLISDPSLDTWVATWTFSETIHSRSYTHIMRNLYTDPSKVFDEIVLDEAIMK 148

Query: 158 KANWALQYTQTLSSPSFHYWNKRRRSRILTRS 189
           +A    +Y   +   +  + N +    +   S
Sbjct: 149 RAESIGRYYDDVLIKTREWENAKEFVELAKES 180


>gi|32709431|gb|AAP86734.1| NrdB [Enterobacteria phage T2H]
          Length = 392

 Score = 85.7 bits (211), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 60/152 (39%), Gaps = 3/152 (1%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           ++    +      +  W P EV +  D A +   N L   ++ +   NL + +  +S+  
Sbjct: 32  RHKVFEDLTEKQLSFFWRPEEVNLMMDAAQF---NKLPQYQQDIFTNNLKYQSLLDSIQG 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
                 +   +S+P    ++    F E +HS ++ +I+ +L  D  ++F+      +I  
Sbjct: 89  RAPSAVLMSLISDPSLDTWVATWTFSETIHSRSYTHIMRNLYTDPSKVFDEIVLDKAIMK 148

Query: 158 KANWALQYTQTLSSPSFHYWNKRRRSRILTRS 189
           +A    +Y   +   + ++ N +         
Sbjct: 149 RAESIGRYYDDVIEKTRYWQNAKADIEYKKEI 180


>gi|32709423|gb|AAP86730.1| NrdB [Enterobacteria phage RB27]
          Length = 392

 Score = 85.3 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 60/152 (39%), Gaps = 3/152 (1%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           ++    +      +  W P EV +  D A +   N L   ++ +   NL + +  +S+  
Sbjct: 32  RHKVFEDLTEKQLSFFWRPEEVNLMMDAAQF---NKLPQYQQDIFTNNLKYQSLLDSIQG 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
                 +   +S+P    ++    F E +HS ++ +I+ +L  D  ++F+      +I  
Sbjct: 89  RAPSAVLMSLISDPSLDTWVATWTFSETIHSRSYTHIMRNLYTDPSKVFDEIVLDEAIMK 148

Query: 158 KANWALQYTQTLSSPSFHYWNKRRRSRILTRS 189
           +A    +Y   +   + ++ N +         
Sbjct: 149 RAESIGRYYDDVLIKTRYWENAKADIEYQKEI 180


>gi|116326446|ref|YP_803166.1| ribonucleotide reductase B subunit [Enterobacteria phage RB32]
 gi|32709425|gb|AAP86731.1| NrdB [Enterobacteria phage RB32]
 gi|115344039|gb|ABI95048.1| ribonucleotide reductase B subunit [Enterobacteria phage RB32]
          Length = 392

 Score = 85.3 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 62/152 (40%), Gaps = 3/152 (1%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           ++    E    + +  W P EV +  D A +   N L   ++ +   NL + +  +S+  
Sbjct: 32  RHRVFEELTEKSLSFFWRPEEVNLMMDAAQF---NKLPQYQQNIFTNNLKYQSLLDSIQG 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
                 +   +S+P    ++    F E +HS ++ +I+ +L  D  ++F+      +I  
Sbjct: 89  RAPSAVLMSLISDPSLDTWVATWTFSETIHSRSYTHIMRNLYTDPSKVFDEIVLDEAIMK 148

Query: 158 KANWALQYTQTLSSPSFHYWNKRRRSRILTRS 189
           +A    +Y   +   +  + N +    +   S
Sbjct: 149 RAESIGRYYDDVLVKTREWENAKEFVELAKES 180


>gi|254976540|ref|ZP_05273012.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile QCD-66c26]
 gi|255093925|ref|ZP_05323403.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile CIP 107932]
 gi|255315677|ref|ZP_05357260.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile QCD-76w55]
 gi|255518338|ref|ZP_05386014.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile QCD-97b34]
 gi|255651455|ref|ZP_05398357.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile QCD-37x79]
 gi|260684515|ref|YP_003215800.1| ribonucleoside-diphosphate reductase subunit beta [Clostridium
           difficile CD196]
 gi|260688173|ref|YP_003219307.1| ribonucleoside-diphosphate reductase subunit beta [Clostridium
           difficile R20291]
 gi|260210678|emb|CBA65434.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile CD196]
 gi|260214190|emb|CBE06438.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile R20291]
          Length = 323

 Score = 85.3 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 57/130 (43%), Gaps = 5/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W+P E+ +  D+ +W   N L++ E+ + K+ LG     ++   NN + ++
Sbjct: 25  FWEQNVKQFWLPEEISVSKDIKVW---NELSNKEKELYKKVLGGLTLLDTKQGNNGIPSM 81

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANWA 162
                N + +  L      E +H+ ++  I  +L   L+  ELF      P++  KA+  
Sbjct: 82  MSLTENLQRKAVLSFMGTMEEIHAKSYSSIFMTLLSNLEIDELFEWIETEPTLQRKADLV 141

Query: 163 LQYTQTLSSP 172
           L   +  ++ 
Sbjct: 142 LAQYENTTNQ 151


>gi|255656920|ref|ZP_05402329.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile QCD-23m63]
 gi|296452239|ref|ZP_06893946.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           difficile NAP08]
 gi|296877591|ref|ZP_06901622.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           difficile NAP07]
 gi|296258926|gb|EFH05814.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           difficile NAP08]
 gi|296431442|gb|EFH17258.1| ribonucleotide-diphosphate reductase subunit beta [Clostridium
           difficile NAP07]
          Length = 323

 Score = 85.3 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 56/130 (43%), Gaps = 5/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W+P E+ +  D+ +W   N L++ E+ + K+ LG     ++   NN + ++
Sbjct: 25  FWEQNVKQFWLPEEISVSKDIKIW---NELSNKEKELYKKVLGGLTLLDTKQGNNGIPSM 81

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
                N + +  L      E +H+ ++  I  +L  +    ELF      P++  KA+  
Sbjct: 82  MSLTENLQRKAVLSFMGTMEEIHAKSYSSIFMTLLSNSEIDELFEWIETEPTLQRKADLV 141

Query: 163 LQYTQTLSSP 172
           L   +  ++ 
Sbjct: 142 LAQYENTTNQ 151


>gi|126700615|ref|YP_001089512.1| ribonucleoside-diphosphate reductase subunit beta [Clostridium
           difficile 630]
 gi|255102106|ref|ZP_05331083.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile QCD-63q42]
 gi|255307975|ref|ZP_05352146.1| ribonucleoside-diphosphate reductase beta chain [Clostridium
           difficile ATCC 43255]
 gi|115252052|emb|CAJ69888.1| Ribonucleoside-diphosphate reductase subunit beta (Ribonucleotide
           reductase small subunit) [Clostridium difficile]
          Length = 323

 Score = 84.9 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 57/130 (43%), Gaps = 5/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W+P E+ +  D+ +W   N L++ E+ + K+ LG     ++   NN + ++
Sbjct: 25  FWEQNVKQFWLPEEISVSKDIKVW---NELSNKEKELYKKVLGGLTLLDTKQGNNGIPSM 81

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANWA 162
                N + +  L      E +H+ ++  I  +L   L+  ELF      P++  KA+  
Sbjct: 82  MSLTENLQRKAVLSFMGTMEEIHAKSYSSIFMTLLSNLEIDELFEWIETEPTLQRKADLV 141

Query: 163 LQYTQTLSSP 172
           L   +  ++ 
Sbjct: 142 LAQYENTTNQ 151


>gi|82793227|ref|XP_727957.1| ribonucleotide reductase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23484058|gb|EAA19522.1| ribonucleotide reductase, putative [Plasmodium yoelii yoelii]
          Length = 373

 Score = 84.9 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 49/150 (32%), Gaps = 15/150 (10%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           +  +L        + P+KY   W  Y    +  W   +     D      K  L   ++ 
Sbjct: 18  NDEILKENQFRWVMFPIKYKTFWNYYKEIESLFWTAEDHNFDKD------KPFLNSMDKT 71

Query: 81  MIKRNLGFFASSES------LVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
            + + L  F                I   +   +  PE R +   Q   E +H+  +  I
Sbjct: 72  TLSKLLELFCFYSLKDLHLRDEQAIITSKLLDIIQIPEGRAFYGFQMCMENIHNEVYACI 131

Query: 135 ITSLGLD---EGELFNMYREVPSITAKANW 161
             S  LD   + E+ +   +  S+  K NW
Sbjct: 132 FESYSLDSKQKKEIIDKVLKYESVFKKQNW 161


>gi|251797995|ref|YP_003012726.1| ribonucleotide-diphosphate reductase subunit beta [Paenibacillus
           sp. JDR-2]
 gi|247545621|gb|ACT02640.1| Ribonucleoside-diphosphate reductase [Paenibacillus sp. JDR-2]
          Length = 318

 Score = 84.9 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 54/150 (36%), Gaps = 6/150 (4%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W   E+P+ DD   W     ++D ER + K  LG     +++     +  I
Sbjct: 17  FWQQNVMQFWTDEEIPLSDDKMDW---MEMSDTERTVYKNVLGGLTLLDTIQGGVGMPKI 73

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             H+   + +  L   +  E +H+ ++  I T+L   E    +F        +  KA   
Sbjct: 74  LEHVDGLQRKAVLAFMSMMEQIHAKSYSSIFTTLASTEEIDAIFQWVETNEQLQKKATLV 133

Query: 163 LQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             + Q + +     +     S  L   L +
Sbjct: 134 SSWYQGIET-KQQLYKAMAASVFLESYLFY 162


>gi|308814593|ref|YP_003934867.1| ribonucleotide reductase B subunit [Shigella phage SP18]
 gi|308206185|gb|ADO19584.1| ribonucleotide reductase B subunit [Shigella phage SP18]
          Length = 392

 Score = 84.9 bits (209), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 62/151 (41%), Gaps = 3/151 (1%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           ++    E      +  W P EV +  D A +   N L + ++ +   NL + +  +S+  
Sbjct: 32  RHKVFEELTEKQLSFFWRPEEVNLMMDGAQF---NKLPEHQQNIFTNNLKYQSLLDSIQG 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
                A+   +S+P    ++    F E +HS ++ +I+ +L  D  ++F+      +I  
Sbjct: 89  RAPAAALAALVSDPSLDTWIQTWTFSETIHSRSYTHIMRNLYTDPAKVFDEILLDDAIMK 148

Query: 158 KANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
           +A     Y   + + +  + N+     +   
Sbjct: 149 RAESIGHYYDDVLNKTRQWQNQIAFVELAKE 179


>gi|328861691|gb|EGG10794.1| hypothetical protein MELLADRAFT_93450 [Melampsora larici-populina
           98AG31]
          Length = 130

 Score = 84.9 bits (209), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 2/71 (2%)

Query: 53  HWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPE 112
            W   E+    D+  W+  N L +DE+  IK  L F A+S+ +V  N++      +   E
Sbjct: 60  FWTAGEIDPSKDMHNWE--NRLKNDEKHFIKHILAFLATSDRIVNQNLIKRYSGEVQAAE 117

Query: 113 CRQYLLRQAFE 123
            + +   Q   
Sbjct: 118 AQCFYGFQIMI 128


>gi|282599256|ref|YP_003358568.1| NrdB ribonucleotide reductase subunit beta [Shigella phage
           phiSboM-AG3]
 gi|226973562|gb|ACO94315.1| NrdB ribonucleotide reductase subunit beta [Shigella phage
           phiSboM-AG3]
          Length = 367

 Score = 84.5 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 3/117 (2%)

Query: 39  YGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN 98
           + +  + Y    +  W P EV +  D A + +   LT  E+ + + NL      +S+   
Sbjct: 36  WPFVQKWYEKGLSQFWRPEEVDITKDKADYAT---LTPAEKRIYESNLKRQTMLDSIQGA 92

Query: 99  NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
               A     S PE +  +L    +EA+HS ++ +I+ +   D G +F+   +V  I
Sbjct: 93  APFEAFGPWASTPEMQFAVLEWTRQEAIHSLSYTHILRNTVNDPGIVFDHVLDVAEI 149


>gi|113951985|gb|AAP86733.2| NrdB [Enterobacteria phage RB61]
          Length = 251

 Score = 84.5 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 60/152 (39%), Gaps = 3/152 (1%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           ++    +      +  W P EV +  D A +   N L   ++ +   NL + +  +S+  
Sbjct: 32  RHKVFEDLTEKQLSFFWRPEEVNLMMDAAQF---NKLPQYQQNIFTNNLKYQSLLDSIQG 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
                 +   +S+P    ++    F E +HS ++ +I+ +L  D  ++F+      +I  
Sbjct: 89  RAPSAVLMSLISDPSLDTWVATWTFSETIHSRSYTHIMRNLYTDPSKVFDEIVLDKAIMK 148

Query: 158 KANWALQYTQTLSSPSFHYWNKRRRSRILTRS 189
           +A    +Y   +   + ++ N +         
Sbjct: 149 RAESIGRYYDDVIEKTRYWQNAKADIEYQKEI 180


>gi|50404173|gb|AAT76849.1| ribonucleotide reductase small subunit [Plasmodium falciparum]
          Length = 324

 Score = 84.5 bits (208), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 53/152 (34%), Gaps = 14/152 (9%)

Query: 20  DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER 79
           ++  +L        + P+KY   W  Y    +  W   +     D      K  L + ++
Sbjct: 17  NNDEILKENKFRWVMFPIKYKTFWSYYKEIESLFWTAEDYNFDKD------KQYLENIDK 70

Query: 80  LMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
            M+ ++L  +          I   +   +  PE R +   Q   E +H   +  I  +  
Sbjct: 71  NMLVKDLHVY-----EEQALITSKMLDIIQIPEGRAFYGFQMCMENIHDEVYACIFETYI 125

Query: 140 LDEGE---LFNMYREVPSITAKANWALQYTQT 168
            D  +   + N   E+ S+  K  W  +  ++
Sbjct: 126 PDSKQKRVIINKVIELDSVLKKQKWLTEIFES 157


>gi|238695377|ref|YP_002922570.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage
           JS10]
 gi|220029513|gb|ACL78447.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage
           JS10]
          Length = 379

 Score = 84.5 bits (208), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 56/132 (42%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           ++    E      +  W P EV +  D A +   N L   ++ +   NL + +  +S+  
Sbjct: 32  RHKVFEELCEKQLSFFWRPEEVNLMMDAAQF---NKLPQFQQNIFTNNLKYQSLLDSIQG 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
                A+   +S+P    ++    F E +HS ++ +I+ +L  D  ++F+      +I  
Sbjct: 89  RAPSAALQALISDPSLDTWVATWTFSETIHSRSYTHIMRNLYTDPSKVFDEILLDEAIMK 148

Query: 158 KANWALQYTQTL 169
           +A    +Y   +
Sbjct: 149 RAESIGRYYDDV 160


>gi|161622513|ref|YP_001595352.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           JS98]
 gi|160213819|gb|ABX11158.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           JS98]
          Length = 379

 Score = 84.5 bits (208), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 56/132 (42%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           ++    E      +  W P EV +  D A +   N L   ++ +   NL + +  +S+  
Sbjct: 32  RHKVFEELCEKQLSFFWRPEEVNLMMDAAQF---NKLPQFQQNIFTNNLKYQSLLDSIQG 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
                A+   +S+P    ++    F E +HS ++ +I+ +L  D  ++F+      +I  
Sbjct: 89  RAPSAALQALISDPSLDTWVATWTFSETIHSRSYTHIMRNLYTDPSKVFDEILLDEAIMK 148

Query: 158 KANWALQYTQTL 169
           +A    +Y   +
Sbjct: 149 RAESIGRYYDDV 160


>gi|314121808|ref|YP_004063927.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           vB_EcoM-VR7]
 gi|313151565|gb|ADR32621.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           vB_EcoM-VR7]
          Length = 392

 Score = 84.1 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 62/151 (41%), Gaps = 3/151 (1%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           ++    E      +  W P EV +  D A +   N L + ++ +   NL + +  +S+  
Sbjct: 32  RHKVFEELTEKQLSFFWRPEEVNLMMDGAQF---NKLPEHQQNIFTNNLKYQSLLDSIQG 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
                A+   +S+P    ++    F E +HS ++ +I+ +L  D  ++F+      +I  
Sbjct: 89  RAPAAALAALVSDPSLDTWIQTWTFSETIHSRSYTHIMRNLYTDPAKVFDEILLDDAIMK 148

Query: 158 KANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
           +A     Y   + + +  + N+     +   
Sbjct: 149 RAESIGYYYDDVLNKTRQWQNQIAFVELAKE 179


>gi|113951975|gb|AAP86729.2| NrdB [Enterobacteria phage RB23]
          Length = 251

 Score = 84.1 bits (207), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 60/152 (39%), Gaps = 3/152 (1%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           ++    +      +  W P EV +  D A +   N L   ++ +   NL + +  +S+  
Sbjct: 32  RHKVFEDLTEKQLSFFWRPEEVNLMMDAAQF---NKLPQYQQNIFTNNLKYQSLLDSIQG 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
                 +   +S+P    ++    F E +HS ++ +I+ +L  D  ++F+      +I  
Sbjct: 89  RAPSAVLMSLISDPSLDTWVATWTFSETIHSRSYTHIMRNLYTDPSKVFDEIVLDEAIMK 148

Query: 158 KANWALQYTQTLSSPSFHYWNKRRRSRILTRS 189
           +A    +Y   +   + ++ N +         
Sbjct: 149 RAESIGRYYDDVLIKTRYWENAKADIEYQKEI 180


>gi|221055321|ref|XP_002258799.1| Ribonucleotide reductase small subunit [Plasmodium knowlesi strain
           H]
 gi|193808869|emb|CAQ39572.1| Ribonucleotide reductase small subunit,putative [Plasmodium
           knowlesi strain H]
          Length = 335

 Score = 84.1 bits (207), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 54/158 (34%), Gaps = 15/158 (9%)

Query: 20  DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER 79
           ++  +L        + P+KY   W  Y    +  W   +     D      K  L   ++
Sbjct: 17  NNDDILKENQFRWVMFPIKYKTFWSYYKEVESLFWTAEDYNFDKD------KKFLESIDK 70

Query: 80  LMIKRNLG---FFASSESLVANN---IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
            M+ +      F++  +  V      I   +   +  PE R +   Q   E +H   +  
Sbjct: 71  NMLVKLFELICFYSLKDLHVYEEQALITSKMLDIIQIPEGRAFYGFQMCMENIHDEVYAC 130

Query: 134 IITSLGLDEGE---LFNMYREVPSITAKANWALQYTQT 168
           I  +   D  +   + N   ++ S+  K  W  +  +T
Sbjct: 131 IFETYIPDAKQKRTIINKVIQLDSVLKKQKWLTELFET 168


>gi|47566242|ref|ZP_00237270.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           G9241]
 gi|47556795|gb|EAL15126.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           G9241]
          Length = 322

 Score = 84.1 bits (207), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 51/130 (39%), Gaps = 5/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W   E+ +  D   W     L+  E++  KR LG     ++      +  +
Sbjct: 17  FWKQNIAQFWTEEEIAVSSDKNTWAQ---LSKQEQVAYKRVLGGLTLLDTKQGGEGMPLV 73

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             HL N + +  L      E VH+ ++ +I T+L  +E   E+F+     P +  KA   
Sbjct: 74  LVHLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDEIFDWVDTHPLLEKKAGII 133

Query: 163 LQYTQTLSSP 172
             Y + L  P
Sbjct: 134 TSYYRRLLKP 143


>gi|52143985|ref|YP_082843.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus
           E33L]
 gi|228984529|ref|ZP_04144706.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|229155020|ref|ZP_04283134.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           ATCC 4342]
 gi|51977454|gb|AAU19004.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           E33L]
 gi|157955324|gb|ABW06037.1| NrdF [Bacillus thuringiensis serovar tochigiensis]
 gi|228628578|gb|EEK85291.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           ATCC 4342]
 gi|228775232|gb|EEM23621.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
          Length = 322

 Score = 84.1 bits (207), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 5/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W   E+ +  D   W     L+ +E++  KR LG     ++      +  +
Sbjct: 17  FWKQNIAQFWTEEEIAVSSDKNTWAQ---LSKEEQVAYKRVLGGLTLLDTKQGGEGMPLV 73

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             HL N + +  L      E VH+ ++ +I T+L  +E   E+F+     P +  KA   
Sbjct: 74  LVHLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDEIFDWVDTHPLLEKKAGII 133

Query: 163 LQYTQTLSSP 172
             Y + L  P
Sbjct: 134 TSYYRRLLKP 143


>gi|299779174|ref|YP_003734368.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           IME08]
 gi|298105903|gb|ADI55547.1| NrdB aerobic NDP reductase small subunit [Enterobacteria phage
           IME08]
          Length = 389

 Score = 84.1 bits (207), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 63/164 (38%), Gaps = 15/164 (9%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           ++    E      +  W P EV +  D A +   N L   ++ +   NL + +  +S+  
Sbjct: 42  RHKVFEELCEKQLSFFWRPEEVNLMMDAAQF---NKLPQFQQNIFTNNLKYQSLLDSIQG 98

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
                A+   +S+P    ++    F E +HS ++ +I+ +L  D  ++F+      +I  
Sbjct: 99  RAPSAALQALISDPSLDTWVATWTFSETIHSRSYTHIMRNLYTDPSKVFDEILLDDAIMK 158

Query: 158 KANWALQYTQTLSSPS------------FHYWNKRRRSRILTRS 189
           +A    +Y   +   +            F    K+ +  ++   
Sbjct: 159 RAESIGRYYDDVIDKTRLYQNALEEYHEFSEGVKQAKYELMRSL 202


>gi|228861541|ref|YP_002854562.1| ribonucleotide reductase B subunit [Enterobacteria phage RB14]
 gi|227438557|gb|ACP30870.1| ribonucleotide reductase B subunit [Enterobacteria phage RB14]
          Length = 392

 Score = 84.1 bits (207), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 61/152 (40%), Gaps = 3/152 (1%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           ++    E    + +  W P EV +  D A +   N L   ++ +   NL + +  +S+  
Sbjct: 32  RHRVFEELTEKSLSFFWRPEEVNLMMDAAQF---NKLPQYQQNIFTNNLKYQSLLDSIQG 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
                 +   +S+P    ++    F E +HS ++ +I+ +L  D  ++F+      +I  
Sbjct: 89  RAPSAVLMSLISDPSLDTWVATWTFSETIHSRSYTHIMRNLYTDPSKVFDEIVLDEAIMK 148

Query: 158 KANWALQYTQTLSSPSFHYWNKRRRSRILTRS 189
           +A    +Y   +   + ++ N +         
Sbjct: 149 RAESIGRYYDDVLIKTRYWENAKADIEYQKEI 180


>gi|113951998|gb|AAP86736.2| NrdB [Enterobacteria phage T6]
          Length = 247

 Score = 84.1 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 56/132 (42%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           ++    E    + +  W P EV +  D A +   N L   ++ +   NL + +  +S+  
Sbjct: 32  RHRVFEELIEKSLSFFWRPEEVNLMMDAAQF---NKLPQYQQNIFTNNLKYQSLLDSIQG 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
                 +   +S+P    ++    F E +HS ++ +I+ +L  D  ++F+      +I  
Sbjct: 89  RAPSAVLMSLISDPSLDTWVATWTFSETIHSRSYTHIMRNLFADPSKVFDEILLDEAIMK 148

Query: 158 KANWALQYTQTL 169
           +A    +Y   +
Sbjct: 149 RAESIGKYYDDV 160


>gi|156096873|ref|XP_001614470.1| ribonucleotide reductase small subunit [Plasmodium vivax SaI-1]
 gi|148803344|gb|EDL44743.1| ribonucleotide reductase small subunit, putative [Plasmodium vivax]
          Length = 335

 Score = 84.1 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 54/158 (34%), Gaps = 15/158 (9%)

Query: 20  DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER 79
           ++  +L        + P+KY   W  Y    +  W   +     D      K  L   ++
Sbjct: 17  NNDDILKENQFRWVMFPIKYKTFWSYYKEIESLFWTAEDYNFDKD------KKFLESIDK 70

Query: 80  LMIKRNLG---FFASSESLVANN---IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
            M+ +      F++  +  V      I   +   +  PE R +   Q   E +H   +  
Sbjct: 71  NMLVKLFELICFYSLKDLHVYEEQALITSKMLDIIQIPEGRAFYGFQMCMENIHDEVYAC 130

Query: 134 IITSLGLDEGE---LFNMYREVPSITAKANWALQYTQT 168
           I  +   D  +   + N   ++ S+  K  W  +  +T
Sbjct: 131 IFETYIPDAKQKRVIINKVIQLDSVLKKQKWLTELFET 168


>gi|32709417|gb|AAP86727.1| NrdB [Enterobacteria phage LZ2]
          Length = 313

 Score = 83.7 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 56/132 (42%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           ++    E    + +  W P EV +  D A +   N L   ++ +   NL + +  +S+  
Sbjct: 32  RHRVFEELTEKSLSFFWRPEEVNLMMDAAQF---NKLPQYQQNIFTNNLKYQSLLDSIQG 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
                 +   +S+P    ++    F E +HS ++ +I+ +L  D  ++F+      +I  
Sbjct: 89  RAPSAVLMSLISDPSLDTWVATWTFSETIHSRSYTHIMRNLYTDPSKVFDEIVLDEAIMK 148

Query: 158 KANWALQYTQTL 169
           +A    +Y   +
Sbjct: 149 RAESIGRYYDDV 160


>gi|289423472|ref|ZP_06425274.1| ribonucleoside-diphosphate reductase, beta subunit
           [Peptostreptococcus anaerobius 653-L]
 gi|289156106|gb|EFD04769.1| ribonucleoside-diphosphate reductase, beta subunit
           [Peptostreptococcus anaerobius 653-L]
          Length = 337

 Score = 83.7 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 61/150 (40%), Gaps = 6/150 (4%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W+P EVP+  D+  W     LT+ ER++ KR L      ++   N+ + ++
Sbjct: 36  FWDQNVKQFWLPEEVPISKDIPSWAE---LTESERILYKRVLAGLTLLDTKQGNDGIPSM 92

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
                N + +  L      E +H+ ++  I T+L       +LF    E P +  KA   
Sbjct: 93  MDLTENFQRKAVLSFMGTMEEIHAKSYSSIFTTLLSKHEIDDLFLWIEEEPLLQNKAKIV 152

Query: 163 LQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           L+  + +  P   Y +    S  L   L +
Sbjct: 153 LRQYKNVEDPKSLYMSMAT-SVFLESFLFY 181


>gi|9632793|ref|NP_049841.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage T4]
 gi|1172940|sp|P11156|RIR2_BPT4 RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Protein B2; AltName: Full=Ribonucleotide
           reductase
 gi|5354417|gb|AAD42624.1|AF158101_211 NrdB aerobic NDP reductase, small subunit [Enterobacteria phage T4]
 gi|15342|emb|CAA27757.1| small subunit B2 [Enterobacteria phage T4]
 gi|299780589|gb|ADJ39951.1| aerobic NDP reductase small subunit [Enterobacteria phage T4T]
          Length = 388

 Score = 83.7 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           ++    E      +  W P EV +  D A +   N L   ++ +   NL + +  +S+  
Sbjct: 32  RHRVFEELIERQISFFWRPEEVNLMMDAAQF---NKLPQYQQNIFTNNLKYQSLLDSIQG 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
                 +   +S+P    ++    F E +HS ++ +I+ +L  D  ++F+      +I  
Sbjct: 89  RAPSAVLMSLISDPSLDTWVATWTFSETIHSRSYTHIMRNLYTDPSKVFDEIVLDEAIMK 148

Query: 158 KANWALQYTQTL 169
           +A    +Y   +
Sbjct: 149 RAESIGRYYDDV 160


>gi|152974880|ref|YP_001374397.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus
           subsp. cytotoxis NVH 391-98]
 gi|152023632|gb|ABS21402.1| Ribonucleoside-diphosphate reductase [Bacillus cytotoxicus NVH
           391-98]
          Length = 322

 Score = 83.7 bits (206), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 5/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W   E+ +  D   W     L+ +E+   KR LG     ++      +  +
Sbjct: 17  FWKQNIAQFWTEEEIAVSSDKNTWVQ---LSKEEQTTYKRVLGGLTLLDTKQGGEGMPLV 73

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             H+ N + +  L      E VH+ ++ +I T+L  +E   E+F+   + P +  KA   
Sbjct: 74  LVHIENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDEIFDWVDQHPLLEKKAGII 133

Query: 163 LQYTQTLSSP 172
             Y + L  P
Sbjct: 134 TGYYRKLLKP 143


>gi|30261453|ref|NP_843830.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. Ames]
 gi|47526645|ref|YP_017994.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49184287|ref|YP_027539.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. Sterne]
 gi|49477196|ref|YP_035577.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|65318723|ref|ZP_00391682.1| COG0208: Ribonucleotide reductase, beta subunit [Bacillus anthracis
           str. A2012]
 gi|118476922|ref|YP_894073.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           thuringiensis str. Al Hakam]
 gi|165870361|ref|ZP_02215016.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0488]
 gi|167634337|ref|ZP_02392658.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0442]
 gi|167639338|ref|ZP_02397610.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0193]
 gi|170686782|ref|ZP_02878002.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0465]
 gi|170706310|ref|ZP_02896771.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0389]
 gi|177651561|ref|ZP_02934350.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0174]
 gi|190568085|ref|ZP_03020995.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis Tsiankovskii-I]
 gi|196035278|ref|ZP_03102683.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           W]
 gi|196046555|ref|ZP_03113780.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           03BB108]
 gi|218902561|ref|YP_002450395.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           AH820]
 gi|225863317|ref|YP_002748695.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           03BB102]
 gi|227815798|ref|YP_002815807.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. CDC 684]
 gi|228914025|ref|ZP_04077647.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|228932735|ref|ZP_04095607.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228945050|ref|ZP_04107411.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|229090407|ref|ZP_04221650.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-42]
 gi|229120993|ref|ZP_04250235.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           95/8201]
 gi|229183646|ref|ZP_04310869.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BGSC 6E1]
 gi|229602752|ref|YP_002865867.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0248]
 gi|254682483|ref|ZP_05146344.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. CNEVA-9066]
 gi|254726146|ref|ZP_05187928.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. A1055]
 gi|254733899|ref|ZP_05191613.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. Western North America USA6153]
 gi|254740411|ref|ZP_05198102.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. Kruger B]
 gi|254753802|ref|ZP_05205837.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. Vollum]
 gi|254758897|ref|ZP_05210924.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis str. Australia 94]
 gi|301052993|ref|YP_003791204.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           anthracis CI]
 gi|30255307|gb|AAP25316.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. Ames]
 gi|47501793|gb|AAT30469.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|49178214|gb|AAT53590.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. Sterne]
 gi|49328752|gb|AAT59398.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|72414680|emb|CAG28950.1| ribonucleoside-diphosphate reductase class Ib beta chain [Bacillus
           anthracis]
 gi|118416147|gb|ABK84566.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Bacillus thuringiensis str. Al Hakam]
 gi|157955314|gb|ABW06029.1| NrdF [Bacillus thuringiensis serovar finitimus]
 gi|164713856|gb|EDR19378.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0488]
 gi|167512777|gb|EDR88151.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0193]
 gi|167530225|gb|EDR92951.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0442]
 gi|170128844|gb|EDS97710.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0389]
 gi|170669305|gb|EDT20048.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0465]
 gi|172082839|gb|EDT67902.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0174]
 gi|190560819|gb|EDV14794.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis Tsiankovskii-I]
 gi|195991955|gb|EDX55918.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           W]
 gi|196022739|gb|EDX61421.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           03BB108]
 gi|218537212|gb|ACK89610.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           AH820]
 gi|225785957|gb|ACO26174.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           03BB102]
 gi|227004217|gb|ACP13960.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. CDC 684]
 gi|228599889|gb|EEK57486.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BGSC 6E1]
 gi|228662653|gb|EEL18251.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           95/8201]
 gi|228692990|gb|EEL46708.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-42]
 gi|228814719|gb|EEM60979.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228826940|gb|EEM72702.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar andalousiensis BGSC 4AW1]
 gi|228845630|gb|EEM90659.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|229267160|gb|ACQ48797.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           anthracis str. A0248]
 gi|300375162|gb|ADK04066.1| ribonucleotide-diphosphate reductase beta subunit [Bacillus cereus
           biovar anthracis str. CI]
 gi|324325470|gb|ADY20730.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 322

 Score = 83.4 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 5/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W   E+ +  D   W     L+ +E++  KR LG     ++      +  +
Sbjct: 17  FWKQNIAQFWTEEEIAVSSDKNTWVQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLV 73

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             HL N + +  L      E VH+ ++ +I T+L  +E   E+F+     P +  KA   
Sbjct: 74  LVHLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDEIFDWVDTHPLLEKKAGII 133

Query: 163 LQYTQTLSSP 172
             Y + L  P
Sbjct: 134 TSYYRRLLKP 143


>gi|228926484|ref|ZP_04089556.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
 gi|228833308|gb|EEM78873.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar pondicheriensis BGSC 4BA1]
          Length = 322

 Score = 83.4 bits (205), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 5/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W   E+ +  D   W     L+ +E++  KR LG     ++      +  +
Sbjct: 17  FWKQNIAQFWTEEEIAVSSDKNTWVQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLV 73

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             HL N + +  L      E VH+ ++ +I T+L  +E   E+F+     P +  KA   
Sbjct: 74  LVHLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDEIFDWVDTHPLLEKKAGII 133

Query: 163 LQYTQTLSSP 172
             Y + L  P
Sbjct: 134 TSYYRRLLKP 143


>gi|229102053|ref|ZP_04232765.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-28]
 gi|228681373|gb|EEL35538.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-28]
          Length = 322

 Score = 83.0 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 5/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W   E+ +  D   W     L+ +E++  KR LG     ++      +  +
Sbjct: 17  FWKQNIAQFWTEEEIAVSSDKNTWAQ---LSKEEQVAYKRVLGGLTLLDTKQGGEGMPLV 73

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             HL N + +  L      E VH+ ++ +I T+L  +E   ++F      P +  KA   
Sbjct: 74  LVHLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFEWVDNHPLLEKKAGII 133

Query: 163 LQYTQTLSSP 172
            +Y + L  P
Sbjct: 134 TRYYRRLLKP 143


>gi|32709433|gb|AAP86735.1| NrdB [Enterobacteria phage U5]
          Length = 391

 Score = 83.0 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 60/145 (41%), Gaps = 3/145 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           ++    E    + +  W P EV +  D A +   N L   ++ +   NL + +  +S+  
Sbjct: 32  RHRVFEELIEKSLSFFWRPEEVNLMMDAAQF---NKLPQYQQNIFTNNLKYQSLLDSIQG 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
                 +   +S+P    ++    F E +HS ++ +I+ +L  D  ++F+      +I  
Sbjct: 89  RAPSAVLMSLISDPSLDTWVATWTFSETIHSRSYTHIMRNLYTDPSKVFDEIVLDEAIMK 148

Query: 158 KANWALQYTQTLSSPSFHYWNKRRR 182
           +A    +Y   +   +  + N +  
Sbjct: 149 RAESIGRYYDDVLVKTREWENAKEN 173


>gi|229095937|ref|ZP_04226913.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-29]
 gi|229114891|ref|ZP_04244304.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock1-3]
 gi|228668583|gb|EEL24012.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock1-3]
 gi|228687447|gb|EEL41349.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-29]
          Length = 322

 Score = 83.0 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 5/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W   E+ +  D   W     L+ +E++  KR LG     ++      +  +
Sbjct: 17  FWKQNIAQFWTEEEIAVSSDKNTWAQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLV 73

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             HL N + +  L      E VH+ ++ +I T+L  +E   ++F      P +  KA   
Sbjct: 74  LVHLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFEWVDNHPLLEKKAGII 133

Query: 163 LQYTQTLSSP 172
            +Y + L  P
Sbjct: 134 TRYYRRLLKP 143


>gi|319944853|ref|ZP_08019115.1| ribonucleotide-diphosphate reductase subunit beta [Lautropia
           mirabilis ATCC 51599]
 gi|319741423|gb|EFV93848.1| ribonucleotide-diphosphate reductase subunit beta [Lautropia
           mirabilis ATCC 51599]
          Length = 333

 Score = 82.6 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 64/161 (39%), Gaps = 5/161 (3%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           E+ +++ +K              L+     E +     N W+P +VP+ +D+  W +   
Sbjct: 5   EQVIDMSNKEKARKVPLAINWNRLQDEKDLEVWNRLTANFWLPEKVPLSNDVQSWAT--- 61

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           L ++E+ +  R        +++       ++      P     L   AF EAVH+ ++  
Sbjct: 62  LREEEQTLTIRVFTGLTLLDTIQNTVGAPSMMPDAQTPHEEAVLTNIAFMEAVHARSYSS 121

Query: 134 IITSL--GLDEGELFNMYREVPSITAKANWALQYTQTLSSP 172
           I ++L    +  E F    E P + AKA   L+     S P
Sbjct: 122 IFSTLCSTREVDEAFRWSEENPQLQAKARLILEEYDAASDP 162


>gi|229084444|ref|ZP_04216723.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-44]
 gi|228698872|gb|EEL51578.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock3-44]
          Length = 322

 Score = 82.6 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 5/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W   E+ +  D   W     L+ +E++  KR LG     ++      +  +
Sbjct: 17  FWKQNIAQFWTEEEIAVSSDKNTWAQ---LSREEQIAYKRVLGGLTLLDTKQGGEGMPLV 73

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             HL N + +  L      E VH+ ++ +I T+L  +E   E+F+     P +  KA   
Sbjct: 74  LVHLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDEIFDWVDSHPLLEKKAGII 133

Query: 163 LQYTQTLSSP 172
             Y + L  P
Sbjct: 134 TGYYRRLLKP 143


>gi|113951972|gb|AAP86728.2| NrdB [Enterobacteria phage RB14]
          Length = 251

 Score = 82.6 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 61/152 (40%), Gaps = 3/152 (1%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           ++    E    + +  W P EV +  D A +   N L   ++ +   NL + +  +S+  
Sbjct: 32  RHRVFEELTEKSLSFFWRPEEVNLMMDAAQF---NKLPQYQQNIFTNNLKYQSLLDSIQG 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
                 +   +S+P    ++    F E +HS ++ +I+ +L  D  ++F+      +I  
Sbjct: 89  RAPSAVLMSLISDPSLDTWVATWTFSETIHSRSYTHIMRNLYTDPSKVFDEIVLDEAIMK 148

Query: 158 KANWALQYTQTLSSPSFHYWNKRRRSRILTRS 189
           +A    +Y   +   + ++ N +         
Sbjct: 149 RAESIGRYYDDVLIKTRYWENAKADIEYQKEI 180


>gi|226331040|ref|ZP_03806558.1| hypothetical protein PROPEN_04970 [Proteus penneri ATCC 35198]
 gi|225201835|gb|EEG84189.1| hypothetical protein PROPEN_04970 [Proteus penneri ATCC 35198]
          Length = 182

 Score = 82.6 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 55/141 (39%), Gaps = 5/141 (3%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           +      ++     E +     N W+P ++P+ +D+  W   + LT  E+ +  R     
Sbjct: 10  NAINWNRIEDEKDLEVWNRLTMNFWLPEKIPLSNDIPSW---STLTQAEKQLTIRVFTGL 66

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFN 147
              +++        +      P     L    F EAVH+ ++  I ++L L  D  E + 
Sbjct: 67  TLLDTIQNTVGAPTLMPDALTPHEEAVLSNICFMEAVHARSYSSIFSTLCLTTDVDEAYR 126

Query: 148 MYREVPSITAKANWALQYTQT 168
              E P +  KA   L+Y Q 
Sbjct: 127 WSEENPYLQKKAEIILRYYQD 147


>gi|122892861|gb|ABM67449.1| NrdB [Xanthomonas campestris]
 gi|122892863|gb|ABM67450.1| NrdB [Xanthomonas campestris]
 gi|122892865|gb|ABM67451.1| NrdB [Xanthomonas campestris]
 gi|122892867|gb|ABM67452.1| NrdB [Xanthomonas campestris]
 gi|122892869|gb|ABM67453.1| NrdB [Xanthomonas campestris]
 gi|122892871|gb|ABM67454.1| NrdB [Xanthomonas campestris]
 gi|122892873|gb|ABM67455.1| NrdB [Xanthomonas campestris]
 gi|122892875|gb|ABM67456.1| NrdB [Xanthomonas campestris]
 gi|122892877|gb|ABM67457.1| NrdB [Xanthomonas campestris]
 gi|122892879|gb|ABM67458.1| NrdB [Xanthomonas campestris]
 gi|122892881|gb|ABM67459.1| NrdB [Xanthomonas campestris]
 gi|122892883|gb|ABM67460.1| NrdB [Xanthomonas campestris]
 gi|122892885|gb|ABM67461.1| NrdB [Xanthomonas campestris]
 gi|122892887|gb|ABM67462.1| NrdB [Xanthomonas campestris]
 gi|122892889|gb|ABM67463.1| NrdB [Xanthomonas campestris]
 gi|122892891|gb|ABM67464.1| NrdB [Xanthomonas campestris]
 gi|122892893|gb|ABM67465.1| NrdB [Xanthomonas campestris]
 gi|122892895|gb|ABM67466.1| NrdB [Xanthomonas campestris]
 gi|122892897|gb|ABM67467.1| NrdB [Xanthomonas campestris]
 gi|122892899|gb|ABM67468.1| NrdB [Xanthomonas campestris]
 gi|122892901|gb|ABM67469.1| NrdB [Xanthomonas campestris]
 gi|122892903|gb|ABM67470.1| NrdB [Xanthomonas campestris]
 gi|122892905|gb|ABM67471.1| NrdB [Xanthomonas campestris]
 gi|122892907|gb|ABM67472.1| NrdB [Xanthomonas campestris]
 gi|122892909|gb|ABM67473.1| NrdB [Xanthomonas campestris]
 gi|122892911|gb|ABM67474.1| NrdB [Xanthomonas campestris]
 gi|122892913|gb|ABM67475.1| NrdB [Xanthomonas campestris]
 gi|122892915|gb|ABM67476.1| NrdB [Xanthomonas campestris]
 gi|122892917|gb|ABM67477.1| NrdB [Xanthomonas campestris]
 gi|122892919|gb|ABM67478.1| NrdB [Xanthomonas campestris]
 gi|122892921|gb|ABM67479.1| NrdB [Xanthomonas campestris]
 gi|122892923|gb|ABM67480.1| NrdB [Xanthomonas campestris]
 gi|122892925|gb|ABM67481.1| NrdB [Xanthomonas campestris]
 gi|122892927|gb|ABM67482.1| NrdB [Xanthomonas campestris]
 gi|122892929|gb|ABM67483.1| NrdB [Xanthomonas campestris]
 gi|122892931|gb|ABM67484.1| NrdB [Xanthomonas campestris]
 gi|122892933|gb|ABM67485.1| NrdB [Xanthomonas campestris]
 gi|122892935|gb|ABM67486.1| NrdB [Xanthomonas campestris]
 gi|122892937|gb|ABM67487.1| NrdB [Xanthomonas campestris]
          Length = 175

 Score = 82.2 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 55/141 (39%), Gaps = 7/141 (4%)

Query: 56  PTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQ 115
           P EV M+ D   +   N L+  E+      +G  A+ +S     I   +  ++++P    
Sbjct: 1   PDEVDMKGDARQY---NELSAREKNAYDSIIGLLATLDSPQTRFIY-NVAEYITDPAAHA 56

Query: 116 YLLRQAFEEAVHSHTFQYIITSLG--LDEGELFNMYREVPSITAKANWALQ-YTQTLSSP 172
                  +E +H+ ++ Y++ S+    D+  +F + R  P+I  +    +  Y   +   
Sbjct: 57  NAAIIGQQEVIHNESYSYVLASITGLADQNRVFEIARTHPTIIKRNAPIMGAYDDFMRDK 116

Query: 173 SFHYWNKRRRSRILTRSLRFL 193
           +     +      +   + F 
Sbjct: 117 TAETLIRALIQSSILEGINFY 137


>gi|119961248|ref|YP_948075.1| ribonucleotide-diphosphate reductase subunit beta [Arthrobacter
           aurescens TC1]
 gi|119948107|gb|ABM07018.1| ribonucleoside-diphosphate reductase beta chain [Arthrobacter
           aurescens TC1]
          Length = 324

 Score = 82.2 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 58/138 (42%), Gaps = 7/138 (5%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    NN W+P +VP+ +D+  W +   LT DE+ +  R        
Sbjct: 15  NWNKIQDDKDVEVWNRLVNNFWLPEKVPLSNDVQSWHT---LTPDEQQLTMRVFTGLTLL 71

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR-- 150
           +++      +++      P         AF E+VH+ ++  I ++L     E+ + +R  
Sbjct: 72  DTIQGTVGAVSLIPDAITPHEEAVYTNIAFMESVHAKSYSSIFSTLCS-TKEIDDAFRWS 130

Query: 151 -EVPSITAKANWALQYTQ 167
            E  ++  KA   + Y Q
Sbjct: 131 LENENLQKKAQIVMDYYQ 148


>gi|291295355|ref|YP_003506753.1| ribonucleoside-diphosphate reductase [Meiothermus ruber DSM 1279]
 gi|290470314|gb|ADD27733.1| Ribonucleoside-diphosphate reductase [Meiothermus ruber DSM 1279]
          Length = 429

 Score = 82.2 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 53/122 (43%), Gaps = 5/122 (4%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W+  E+P+ DD   W     L+ +E+ + ++ L      +++  +  +  +
Sbjct: 24  FWDQNVRQFWVDEEIPLADDKLTW---MTLSREEQRVYEQVLAGLTLLDTVQGSVGMPLL 80

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
            +H+ + + +  +      E +H+ ++  I ++L   E   ELF+  R  P +  K  + 
Sbjct: 81  SQHIESLQAKAVMGFMGAMEHMHAKSYSSIFSTLCTSERIAELFDWVRSEPVLQEKQTFV 140

Query: 163 LQ 164
            +
Sbjct: 141 HR 142


>gi|294661479|ref|YP_003579932.1| NrdB ribonucleotide reductase B subunit [Klebsiella phage KP15]
 gi|292660640|gb|ADE34888.1| NrdB ribonucleotide reductase B subunit [Klebsiella phage KP15]
          Length = 402

 Score = 82.2 bits (202), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 52/134 (38%), Gaps = 3/134 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+           +  W P EV +  D   +     L + E+++   NL +    +++  
Sbjct: 44  KHKVFESLTQKQLSFFWRPEEVDLSTDRMQYAK---LPEHEKIIFDSNLQYQTLLDTIQG 100

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
               LA     S+     ++   AF E +HS ++ +I  +L +D    F+      +I  
Sbjct: 101 RGPNLAFLPIASDVSMETWIETWAFSETIHSRSYTHIQRNLHIDPSVQFDQILRNEAIMK 160

Query: 158 KANWALQYTQTLSS 171
           ++    +Y  TL  
Sbjct: 161 RSASMTRYYDTLID 174


>gi|32709437|gb|AAP86737.1| NrdB [Enterobacteria phage TuIa]
          Length = 391

 Score = 81.8 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 61/145 (42%), Gaps = 3/145 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           ++    E    + +  W P EV +  D A +   N L   ++ +   NL + +  +S+  
Sbjct: 32  RHKVFEELIEKSLSFFWRPEEVNLMLDSAQF---NKLPQFQQDIFTNNLKYQSLLDSIQG 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
                 +   LS+P    ++    F E +HS ++ +I+ +L  D  ++F+      +I  
Sbjct: 89  RAPSAVLMALLSDPSLDTWVATWTFSETIHSRSYTHIMRNLYTDPSKVFDEIVLDEAIMK 148

Query: 158 KANWALQYTQTLSSPSFHYWNKRRR 182
           +A    +Y   +   + H+ N +  
Sbjct: 149 RAESIGKYYDDVLVKTRHWENAKEN 173


>gi|326804582|ref|YP_004327453.1| Ribonucleotide-diphosphate reductase beta subunit [Salmonella phage
           Vi01]
 gi|301795232|emb|CBW37950.1| Ribonucleotide-diphosphate reductase beta subunit [Salmonella phage
           Vi01]
          Length = 367

 Score = 81.8 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 3/117 (2%)

Query: 39  YGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN 98
           + +  + Y    +  W P EV +  D A + +   L+  E+ +   NL      +S+   
Sbjct: 36  WPFVQKWYEKGLSQFWRPEEVDVTKDKADFAT---LSAAEQHIYFSNLKRQTMLDSIQGA 92

Query: 99  NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSI 155
               A     S PE +  +L    +EA+HS ++ +I+ +   D G +F+   +V  I
Sbjct: 93  APFEAFGPWASTPEAQFAILEWTRQEAIHSLSYTHILRNTVNDPGIVFDHVLDVQEI 149


>gi|296128314|ref|YP_003635564.1| Ribonucleoside-diphosphate reductase [Cellulomonas flavigena DSM
           20109]
 gi|296020129|gb|ADG73365.1| Ribonucleoside-diphosphate reductase [Cellulomonas flavigena DSM
           20109]
          Length = 326

 Score = 81.8 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W +   LT+ E+ M  R        +++      ++
Sbjct: 28  EVWDRLVGNFWLPEKVPVSNDIQSWAT---LTEAEKTMTTRVFTGLTLLDTIQGTVGAVS 84

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELFNMYREVPSITAKANW 161
           +      P         AF E+VH+ ++  I ++L    +  E F    E P++  KA  
Sbjct: 85  LIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLISTKEIDEAFRWSEENPNLQRKAEI 144

Query: 162 ALQYTQ 167
            L Y +
Sbjct: 145 VLDYYR 150


>gi|154508355|ref|ZP_02043997.1| hypothetical protein ACTODO_00852 [Actinomyces odontolyticus ATCC
           17982]
 gi|153797989|gb|EDN80409.1| hypothetical protein ACTODO_00852 [Actinomyces odontolyticus ATCC
           17982]
          Length = 425

 Score = 81.8 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 60/163 (36%), Gaps = 6/163 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +     N W+P ++P+ +DL  WK+   LT DE+LM  R        
Sbjct: 116 NWNKIQDDKDLEVWDRLTGNFWLPEKIPLSNDLPSWKT---LTKDEQLMTNRVFTGLTLL 172

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYR 150
           ++L      +++      P         AF E+VH+ ++  I ++L   E   E F    
Sbjct: 173 DTLQGTVGAVSLIPDARTPHEEAVYTNIAFMESVHAKSYSSIFSTLLSTEEINESFRWSN 232

Query: 151 EVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           E  ++  KA     Y    + P             L  S  + 
Sbjct: 233 ENEALQKKAEIVKSYYDG-NDPEKRKVASTMLESFLFYSGFYA 274


>gi|196040724|ref|ZP_03108023.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           NVH0597-99]
 gi|196028514|gb|EDX67122.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           NVH0597-99]
          Length = 193

 Score = 81.8 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 5/127 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W   E+ +  D   W     L+ +E++  KR LG     ++      +  +
Sbjct: 17  FWKQNIAQFWTEEEIAVSSDKNTWVQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLV 73

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             HL N + +  L      E VH+ ++ +I T+L  +E   E+F+     P +  KA   
Sbjct: 74  LVHLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDEIFDWVDTHPLLEKKAGII 133

Query: 163 LQYTQTL 169
             Y + L
Sbjct: 134 TSYYRRL 140


>gi|296393703|ref|YP_003658587.1| ribonucleoside-diphosphate reductase [Segniliparus rotundus DSM
           44985]
 gi|296180850|gb|ADG97756.1| Ribonucleoside-diphosphate reductase [Segniliparus rotundus DSM
           44985]
          Length = 334

 Score = 81.8 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 56/126 (44%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W +   L +DE+ +  R        +++  +   ++
Sbjct: 36  EVWDRLVGNFWLPEKVPLSNDIQSWHT---LNEDEQRLTMRVFTGLTLLDTIQGSVGAVS 92

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL-GLDE-GELFNMYREVPSITAKANW 161
           +      P         AF E+VH+ ++  I ++L G  E  E F    E P++  KA  
Sbjct: 93  LIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLTGTPEIDEAFRWSEENPALQKKAAI 152

Query: 162 ALQYTQ 167
            L+  +
Sbjct: 153 VLERYR 158


>gi|229172092|ref|ZP_04299657.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           MM3]
 gi|228611435|gb|EEK68692.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           MM3]
          Length = 193

 Score = 81.8 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 56/153 (36%), Gaps = 8/153 (5%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W   E+ +  D   W     L+ +E++  KR LG     ++      +  +
Sbjct: 17  FWKQNIAQFWTEEEIAVSSDKNTWAQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLV 73

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             HL N + +  L      E VH+ ++ +I T+L  +E   ++F      P +  KA   
Sbjct: 74  LVHLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFEWVDNHPLLEKKAGIV 133

Query: 163 LQYTQTLSSPS---FHYWNKRRRSRILTRSLRF 192
             Y + L  P       +     S  L   L +
Sbjct: 134 TSYYRRLLKPEVTKKELYMAMVASVFLESYLFY 166


>gi|74419022|gb|ABA03237.1| ribonucleoside diphosphate reductase small subunit [Enterobacteria
           phage LZ7]
          Length = 244

 Score = 81.8 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 57/136 (41%), Gaps = 3/136 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           ++    E    + +  W P EV +  D A +   N L   ++ +   NL + +  +S+  
Sbjct: 32  RHRVFEELIEKSLSFFWRPEEVNLMMDAAQF---NKLPQYQQDIFTNNLKYQSLLDSIQG 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
                 +   +S+P    ++    F E +HS ++ +I+ +L  D  ++F+      +I  
Sbjct: 89  RAPSAVLMSLISDPSLDTWVATWTFSETIHSRSYTHIMRNLYADPSKVFDEIVLDKAIMK 148

Query: 158 KANWALQYTQTLSSPS 173
           +A    +Y   +   +
Sbjct: 149 RAESIGRYYDDVLDKT 164


>gi|219883069|ref|YP_002478233.1| Ribonucleoside-diphosphate reductase [Arthrobacter chlorophenolicus
           A6]
 gi|219862075|gb|ACL42416.1| Ribonucleoside-diphosphate reductase [Arthrobacter chlorophenolicus
           A6]
          Length = 326

 Score = 81.8 bits (201), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 59/142 (41%), Gaps = 5/142 (3%)

Query: 28  RSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLG 87
           R +      ++     E +    NN W+P ++P+ +D+  W +   LT +E+L+  R   
Sbjct: 10  RVNAINWNRIQDDKDVEVWNRLVNNFWLPEKIPLSNDVQSWAT---LTPEEQLLTMRVFT 66

Query: 88  FFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGEL 145
                +++      +++      P     L   AF E+VH+ ++  I ++L    +  E 
Sbjct: 67  GLTLLDTIQGTVGAVSLIPDAITPHEEAVLTNIAFMESVHAKSYSSIFSTLCSTKEIDEA 126

Query: 146 FNMYREVPSITAKANWALQYTQ 167
           F    E   +  KA   + Y Q
Sbjct: 127 FRWSEENVHLQKKAQIVMDYYQ 148


>gi|325963521|ref|YP_004241427.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323469608|gb|ADX73293.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Arthrobacter phenanthrenivorans Sphe3]
          Length = 324

 Score = 81.8 bits (201), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 61/151 (40%), Gaps = 5/151 (3%)

Query: 19  VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
           + +K  L +  +      ++     + +    NN W+P +VP+ +D+  W   N LT  E
Sbjct: 1   MTEKVKLLSHVEAINWNRIQDDKDVDVWNRLVNNFWLPEKVPLSNDVQSW---NTLTPAE 57

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           + +  R        +++      +++      P         AF E+VH+ ++  I ++L
Sbjct: 58  QQLTMRVFTGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTL 117

Query: 139 --GLDEGELFNMYREVPSITAKANWALQYTQ 167
               +  E F    E  ++  KA   + Y Q
Sbjct: 118 ASTKEIDEAFRWSTENENLQKKAQIVMDYYQ 148


>gi|228907084|ref|ZP_04070948.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis IBL 200]
 gi|157955401|gb|ABW06095.1| NrdF [Bacillus thuringiensis serovar toumanoffi]
 gi|228852588|gb|EEM97378.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis IBL 200]
          Length = 322

 Score = 81.8 bits (201), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 5/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W   E+ +  D   W     L+ +E++  KR LG     ++      +  +
Sbjct: 17  FWKQNIAQFWTEEEIAVSSDKNTWAQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLV 73

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             HL N + +  L      E VH+ ++ +I T+L  +E   ++F+     P +  KA   
Sbjct: 74  LVHLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFDWVDNHPLLEKKAGII 133

Query: 163 LQYTQTLSSP 172
             Y + L  P
Sbjct: 134 TGYYRRLLKP 143


>gi|312883652|ref|ZP_07743377.1| ribonucleoside-diphosphate reductase subunit beta [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309368875|gb|EFP96402.1| ribonucleoside-diphosphate reductase subunit beta [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 323

 Score = 81.4 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 60/148 (40%), Gaps = 7/148 (4%)

Query: 19  VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
           ++DKR     +       ++     E +     N W+P ++P+ +D+  WK    LT+DE
Sbjct: 1   MNDKRFTTVSA--INWNRIQDNKDLEIWNRLTVNFWLPEKIPLSNDIQSWKQ---LTEDE 55

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           +++  R        +++        + +    P     L   AF EAVH+ ++  I ++L
Sbjct: 56  QVLTTRVFTGLTLLDTIQNTVGAPVLMKDARTPHEEAVLSNIAFMEAVHARSYSSIFSTL 115

Query: 139 GLDE--GELFNMYREVPSITAKANWALQ 164
                  E F    E P +  KA   L 
Sbjct: 116 CTTPQIDEAFRWAEENPLLQQKAKIILD 143


>gi|86148040|ref|ZP_01066342.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp.
           MED222]
 gi|85834173|gb|EAQ52329.1| ribonucleotide-diphosphate reductase beta subunit [Vibrio sp.
           MED222]
          Length = 320

 Score = 81.4 bits (200), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 53/145 (36%), Gaps = 5/145 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  WK    LT++E+ +  R        +++       A
Sbjct: 21  EIWNRLTVNFWLPEKVPLSNDIQTWKQ---LTEEEQTLTIRVFTGLTLLDTIQNTVGAPA 77

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +      P     L   AF EAVH+ ++  + ++L       E F    E P +  KA  
Sbjct: 78  LMEDARTPHEEAVLTNIAFMEAVHARSYSSVFSTLCTTPQIDEAFRWAEENPLLQKKAQI 137

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRIL 186
            L        P             L
Sbjct: 138 ILDDYLAEGDPLKKKVASVFLESFL 162


>gi|229177859|ref|ZP_04305232.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           172560W]
 gi|228605650|gb|EEK63098.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           172560W]
          Length = 322

 Score = 81.4 bits (200), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 51/130 (39%), Gaps = 5/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W   E+ +  D   W     L+ +E++  KR LG     ++      +  +
Sbjct: 17  FWKQNIAQFWTEEEIAVSSDKNTWAQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLV 73

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             HL N + +  L      E VH+ ++ +I T+L  +E   ++F      P +  KA   
Sbjct: 74  LVHLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFEWVDTHPLLEKKAGII 133

Query: 163 LQYTQTLSSP 172
             Y + L  P
Sbjct: 134 TGYYRRLLKP 143


>gi|229057079|ref|ZP_04196471.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH603]
 gi|228720220|gb|EEL71799.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH603]
          Length = 322

 Score = 81.4 bits (200), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 51/130 (39%), Gaps = 5/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W   E+ +  D   W     L+ +E++  KR LG     ++      +  +
Sbjct: 17  FWKQNIAQFWTEEEIAVSSDKNTWAQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLV 73

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             HL N + +  L      E VH+ ++ +I T+L  +E   ++F      P +  KA   
Sbjct: 74  LVHLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFEWVDNHPLLEKKAGIV 133

Query: 163 LQYTQTLSSP 172
             Y + L  P
Sbjct: 134 TSYYRRLLKP 143


>gi|228990454|ref|ZP_04150419.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           pseudomycoides DSM 12442]
 gi|228996556|ref|ZP_04156195.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
           Rock3-17]
 gi|229004206|ref|ZP_04162007.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
           Rock1-4]
 gi|228757067|gb|EEM06311.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
           Rock1-4]
 gi|228763188|gb|EEM12096.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
           Rock3-17]
 gi|228768980|gb|EEM17578.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           pseudomycoides DSM 12442]
          Length = 322

 Score = 81.4 bits (200), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 5/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W   E+ +  D   W     L+ +E+++ KR LG     ++      +  +
Sbjct: 17  FWKQNIAQFWTEEEIAVSSDKNTWVQ---LSKEEQIVYKRVLGGLTLLDTKQGGEGMPLV 73

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             HL N + +  L      E VH+ ++ +I T+L  +E   E+F      P +  KA   
Sbjct: 74  LVHLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDEIFEWVDSHPLLEKKAGII 133

Query: 163 LQYTQTLSSP 172
             Y + L  P
Sbjct: 134 TGYYRRLLKP 143


>gi|228938567|ref|ZP_04101175.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|228971446|ref|ZP_04132072.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228978059|ref|ZP_04138438.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis Bt407]
 gi|157955340|gb|ABW06049.1| NrdF [Bacillus thuringiensis serovar thuringiensis]
 gi|157955368|gb|ABW06070.1| NrdF [Bacillus thuringiensis serovar galechiae]
 gi|157955384|gb|ABW06082.1| NrdF [Bacillus thuringiensis serovar sotto]
 gi|228781720|gb|EEM29919.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis Bt407]
 gi|228788313|gb|EEM36266.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar thuringiensis str. T01001]
 gi|228821165|gb|EEM67182.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar berliner ATCC 10792]
 gi|326939076|gb|AEA14972.1| ribonucleotide-diphosphate reductase [Bacillus thuringiensis
           serovar chinensis CT-43]
          Length = 322

 Score = 81.4 bits (200), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 51/130 (39%), Gaps = 5/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W   E+ +  D   W     L+ +E++  KR LG     ++      +  +
Sbjct: 17  FWKQNIAQFWTEEEIAVSSDKNTWAQ---LSKEEQVAYKRVLGGLTLLDTKQGGEGMPLV 73

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             HL N + +  L      E VH+ ++ +I T+L  +E   ++F      P +  KA   
Sbjct: 74  LVHLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFEWVDTHPLLEKKAGII 133

Query: 163 LQYTQTLSSP 172
             Y + L  P
Sbjct: 134 TGYYRRLLKP 143


>gi|206968243|ref|ZP_03229199.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           AH1134]
 gi|228951833|ref|ZP_04113931.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
 gi|228957726|ref|ZP_04119470.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|229069003|ref|ZP_04202296.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           F65185]
 gi|206737163|gb|EDZ54310.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           AH1134]
 gi|228714115|gb|EEL65997.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           F65185]
 gi|228801969|gb|EEM48842.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar pakistani str. T13001]
 gi|228807756|gb|EEM54277.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar kurstaki str. T03a001]
          Length = 193

 Score = 81.4 bits (200), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 57/153 (37%), Gaps = 8/153 (5%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W   E+ +  D   W     L+ +E++  KR LG     ++      +  +
Sbjct: 17  FWKQNIAQFWTEEEIAVSSDKNTWVQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLV 73

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             HL N + +  L      E VH+ ++ +I T+L  +E   ++F+     P +  KA   
Sbjct: 74  LVHLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFDWVDNHPLLEKKAGII 133

Query: 163 LQYTQTLSSPS---FHYWNKRRRSRILTRSLRF 192
             Y + L  P       +     S  L   L +
Sbjct: 134 TSYYRRLLKPEVTKKELYMAMVASVFLESYLFY 166


>gi|163939261|ref|YP_001644145.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           weihenstephanensis KBAB4]
 gi|229010750|ref|ZP_04167947.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
           DSM 2048]
 gi|229132251|ref|ZP_04261107.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-ST196]
 gi|229166287|ref|ZP_04294046.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH621]
 gi|163861458|gb|ABY42517.1| Ribonucleoside-diphosphate reductase [Bacillus weihenstephanensis
           KBAB4]
 gi|228617232|gb|EEK74298.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH621]
 gi|228651189|gb|EEL07168.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-ST196]
 gi|228750424|gb|EEM00253.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus mycoides
           DSM 2048]
          Length = 322

 Score = 81.4 bits (200), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 51/130 (39%), Gaps = 5/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W   E+ +  D   W     L+ +E++  KR LG     ++      +  +
Sbjct: 17  FWKQNIAQFWTEEEIAVSSDKNTWAQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLV 73

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             HL N + +  L      E VH+ ++ +I T+L  +E   ++F      P +  KA   
Sbjct: 74  LVHLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFEWVDNHPLLEKKAGIV 133

Query: 163 LQYTQTLSSP 172
             Y + L  P
Sbjct: 134 TSYYRRLLKP 143


>gi|295395248|ref|ZP_06805456.1| ribonucleotide-diphosphate reductase subunit beta [Brevibacterium
           mcbrellneri ATCC 49030]
 gi|294972010|gb|EFG47877.1| ribonucleotide-diphosphate reductase subunit beta [Brevibacterium
           mcbrellneri ATCC 49030]
          Length = 324

 Score = 81.0 bits (199), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 63/151 (41%), Gaps = 5/151 (3%)

Query: 19  VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
           + +K  L +  D      ++     E +     N W+P +VP+ +D+  W +   LTDDE
Sbjct: 1   MSEKLKLVSHVDAINWNRIEDDVDMEVWDRLTANFWLPEKVPLSNDVQSWAT---LTDDE 57

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           +L+  R        +++      +++      P         AF E+VH+ ++  I ++L
Sbjct: 58  KLLTMRVFTGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTL 117

Query: 139 --GLDEGELFNMYREVPSITAKANWALQYTQ 167
               +  E F    E  ++  KA   + Y +
Sbjct: 118 CNTREIDEAFRWSTENQNLQKKAQIIVDYYR 148


>gi|294945135|ref|XP_002784568.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
           ATCC 50983]
 gi|239897674|gb|EER16364.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
           ATCC 50983]
          Length = 238

 Score = 81.0 bits (199), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 28/75 (37%), Gaps = 16/75 (21%)

Query: 123 EEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNK 179
            E +HS T+  +I +   D  E   +F     VPS+  KA WAL +              
Sbjct: 1   MENIHSETYSLLIDNYIKDPAEKDKIFRAIETVPSVRKKAEWALSWIND----------- 49

Query: 180 RRRSRILTRSLRFLC 194
              +    R + F C
Sbjct: 50  --DNCFSERLIAFAC 62


>gi|116670901|ref|YP_831834.1| ribonucleotide-diphosphate reductase subunit beta [Arthrobacter sp.
           FB24]
 gi|116611010|gb|ABK03734.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Arthrobacter sp. FB24]
          Length = 324

 Score = 81.0 bits (199), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 62/151 (41%), Gaps = 5/151 (3%)

Query: 19  VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
           + +K  L +  +      ++     + +    NN W+P +VP+ +D+  W +   LT DE
Sbjct: 1   MTEKVKLLSHVEAINWNRIQDDKDVDVWNRLVNNFWLPEKVPLSNDVQSWAT---LTPDE 57

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           + +  R        +++      +++      P         AF E+VH+ ++  I ++L
Sbjct: 58  QQLTMRVFTGLTLLDTIQGTVGAVSLIPDAITPHEEAVYTNIAFMESVHAKSYSSIFSTL 117

Query: 139 --GLDEGELFNMYREVPSITAKANWALQYTQ 167
               +  E F    E  ++  KA   + Y Q
Sbjct: 118 ASTKEIDEAFRWSTENANLQKKAQIVMDYYQ 148


>gi|228904848|ref|ZP_04068902.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis IBL 4222]
 gi|228854862|gb|EEM99466.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis IBL 4222]
          Length = 343

 Score = 81.0 bits (199), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 57/131 (43%), Gaps = 5/131 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            Y       W+  E+P+  D  +W   + L  D++ + K+ LG     ++      +  +
Sbjct: 29  IYNQMRQQFWLENEIPVSKDKNVW---DMLPKDQKEVYKKVLGGLTLLDTKQGGEGMPLV 85

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             H+ +P+ +  +   A  E +H+ ++ +I  +L  +E    +F+   E P +  KA+  
Sbjct: 86  SLHMEDPQKKAIINFMAMMEDIHAKSYSHIFMTLCENEEVDAVFDWVEENPFLQKKADII 145

Query: 163 LQYTQTLSSPS 173
             + + L  P 
Sbjct: 146 TGHYRKLLKPD 156


>gi|269957220|ref|YP_003327009.1| Ribonucleoside-diphosphate reductase [Xylanimonas cellulosilytica
           DSM 15894]
 gi|269305901|gb|ACZ31451.1| Ribonucleoside-diphosphate reductase [Xylanimonas cellulosilytica
           DSM 15894]
          Length = 326

 Score = 81.0 bits (199), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W +   L++ E+ M  R        +++      ++
Sbjct: 28  EVWDRLVGNFWVPEKVPVSNDIQSWAT---LSEAEKNMTTRVFTGLTLLDTIQGTVGAVS 84

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELFNMYREVPSITAKANW 161
           +      P         AF E+VH+ ++  I ++L    +  E F      P++  KA  
Sbjct: 85  LIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLISTKEIDEAFAWSEANPNLQRKAEI 144

Query: 162 ALQYTQ 167
            L+Y +
Sbjct: 145 VLEYYR 150


>gi|218709884|ref|YP_002417505.1| ribonucleoside-diphosphate reductase subunit beta [Vibrio
           splendidus LGP32]
 gi|218322903|emb|CAV19080.1| Ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           splendidus LGP32]
          Length = 323

 Score = 81.0 bits (199), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 35/167 (20%), Positives = 60/167 (35%), Gaps = 5/167 (2%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           K+M +          +  G   E +     N W+P +VP+ +D+  WK    LT++E+ +
Sbjct: 2   KKMESGPVQAINWNRMIDGKDLEIWNRLTVNFWLPEKVPLSNDIQTWKQ---LTEEEQTL 58

Query: 82  IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
             R        +++       A+      P     L   AF EAVH+ ++  + ++L   
Sbjct: 59  TIRVFTGLTLLDTIQNTVGAPALMEDARTPHEEAVLTNIAFMEAVHARSYSSVFSTLCTT 118

Query: 142 E--GELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRIL 186
               E F   +E P +  KA   L        P             L
Sbjct: 119 PQIDEAFRWAQENPLLQKKAQIVLDDYLAEGDPLKKKVASVFLESFL 165


>gi|75758223|ref|ZP_00738348.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|74494277|gb|EAO57368.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
          Length = 342

 Score = 80.7 bits (198), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 57/131 (43%), Gaps = 5/131 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            Y       W+  E+P+  D  +W   + L  D++ + K+ LG     ++      +  +
Sbjct: 28  IYNQMRQQFWLENEIPVSKDKNVW---DMLPKDQKEVYKKVLGGLTLLDTKQGGEGMPLV 84

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             H+ +P+ +  +   A  E +H+ ++ +I  +L  +E    +F+   E P +  KA+  
Sbjct: 85  SLHMEDPQKKAIINFMAMMEDIHAKSYSHIFMTLCENEEVDAVFDWVEENPFLQKKADII 144

Query: 163 LQYTQTLSSPS 173
             + + L  P 
Sbjct: 145 TGHYRKLLKPD 155


>gi|157955336|gb|ABW06046.1| NrdF [Bacillus thuringiensis serovar kurstaki]
          Length = 322

 Score = 80.7 bits (198), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 5/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W   E+ +  D   W     L+ +E++  KR LG     ++      +  +
Sbjct: 17  FWKQNIAQFWTEEEIAVSSDKNTWVQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLV 73

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             HL N + +  L      E VH+ ++ +I T+L  +E   ++F+     P +  KA   
Sbjct: 74  LVHLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFDWVDNHPLLEKKAGII 133

Query: 163 LQYTQTLSSP 172
             Y + L  P
Sbjct: 134 TSYYRRLLKP 143


>gi|229029125|ref|ZP_04185222.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH1271]
 gi|228732183|gb|EEL83068.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH1271]
          Length = 322

 Score = 80.7 bits (198), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 5/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W   E+ +  D   W     L+ +E++  KR LG     ++      +  +
Sbjct: 17  FWKQNIAQFWTEEEIAVSSDKNTWVQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLV 73

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             HL N + +  L      E VH+ ++ +I T+L  +E   ++F+     P +  KA   
Sbjct: 74  LVHLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFDWVDNHPLLEKKAGII 133

Query: 163 LQYTQTLSSP 172
             Y + L  P
Sbjct: 134 TGYYRRLLKP 143


>gi|254505962|ref|ZP_05118107.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus 16]
 gi|219551185|gb|EED28165.1| ribonucleoside-diphosphate reductase, beta subunit [Vibrio
           parahaemolyticus 16]
          Length = 323

 Score = 80.7 bits (198), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 55/156 (35%), Gaps = 5/156 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +     N W+P +VP+ +D+  WK    LT +E+ +  R        
Sbjct: 13  NWNRMQDDKDLEIWNRLTVNFWLPEKVPLSNDIQTWKQ---LTQEEQTLTIRVFTGLTLL 69

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYR 150
           +++       A+      P     L   AF EAVH+ ++  + ++L       E F    
Sbjct: 70  DTIQNTVGAPALMADARTPHEEAVLTNIAFMEAVHARSYSSVFSTLCTTPQIDEAFRWAE 129

Query: 151 EVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRIL 186
           E P +  KA   L+       P             L
Sbjct: 130 ENPLLQKKAQLVLEDYLAQDDPLKKKVASVFLESFL 165


>gi|229189534|ref|ZP_04316550.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           ATCC 10876]
 gi|228593979|gb|EEK51782.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           ATCC 10876]
          Length = 322

 Score = 80.7 bits (198), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 5/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W   E+ +  D   W     L+ +E++  KR LG     ++      +  +
Sbjct: 17  FWKQNIAQFWTEEEIAVSSDKNTWVQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLV 73

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             HL N + +  L      E VH+ ++ +I T+L  +E   ++F+     P +  KA   
Sbjct: 74  LVHLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFDWVDNHPLLEKKAGII 133

Query: 163 LQYTQTLSSP 172
             Y + L  P
Sbjct: 134 TSYYRRLLKP 143


>gi|256832970|ref|YP_003161697.1| Ribonucleoside-diphosphate reductase [Jonesia denitrificans DSM
           20603]
 gi|256686501|gb|ACV09394.1| Ribonucleoside-diphosphate reductase [Jonesia denitrificans DSM
           20603]
          Length = 325

 Score = 80.7 bits (198), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 55/137 (40%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +     N W+P +VP+ +D+  W +   LT  E+ +  R        
Sbjct: 16  NWNRIEDDKDLEVWDRLVGNFWVPEKVPVSNDIQSWAT---LTPQEQELTTRVFTGLTLL 72

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYR 150
           +++      +++      P     L   AF E+VH+ ++  I ++L       E F    
Sbjct: 73  DTIQGTVGAVSLIPDALTPHEEAVLTNIAFMESVHAKSYSTIFSTLISTPEIDEAFRWSE 132

Query: 151 EVPSITAKANWALQYTQ 167
           E P +  KA   L+Y +
Sbjct: 133 ENPHLQRKAEIILEYYR 149


>gi|217958930|ref|YP_002337478.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           AH187]
 gi|222095086|ref|YP_002529146.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           Q1]
 gi|229138141|ref|ZP_04266739.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-ST26]
 gi|229195650|ref|ZP_04322416.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           m1293]
 gi|217065393|gb|ACJ79643.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           AH187]
 gi|221239144|gb|ACM11854.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           Q1]
 gi|228587899|gb|EEK45951.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           m1293]
 gi|228645486|gb|EEL01720.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-ST26]
          Length = 193

 Score = 80.7 bits (198), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 56/153 (36%), Gaps = 8/153 (5%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W   E+ +  D   W     L+ +E++  KR LG     ++      +  +
Sbjct: 17  FWKQNIAQFWTEEEIAVSSDKNTWVQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLV 73

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             HL N + +  L      E VH+ ++ +I T+L  +E   ++F      P +  KA   
Sbjct: 74  LVHLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFEWVDNHPLLEKKAGII 133

Query: 163 LQYTQTLSSPS---FHYWNKRRRSRILTRSLRF 192
             Y + L  P       +     S  L   L +
Sbjct: 134 TSYYRRLLKPEVTKKELYMAMVASVFLESYLFY 166


>gi|218233288|ref|YP_002366135.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus
           B4264]
 gi|229149653|ref|ZP_04277884.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           m1550]
 gi|157955328|gb|ABW06040.1| NrdF [Bacillus thuringiensis serovar entomocidus]
 gi|157955388|gb|ABW06085.1| NrdF [Bacillus thuringiensis serovar subtoxicus]
 gi|157955409|gb|ABW06101.1| NrdF [Bacillus cereus]
 gi|218161245|gb|ACK61237.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           B4264]
 gi|228633863|gb|EEK90461.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           m1550]
          Length = 322

 Score = 80.7 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 5/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W   E+ +  D   W     L+ +E++  KR LG     ++      +  +
Sbjct: 17  FWKQNIAQFWTEEEIAVSSDKNTWVQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLV 73

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             HL N + +  L      E VH+ ++ +I T+L  +E   ++F+     P +  KA   
Sbjct: 74  LVHLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFDWVDNHPLLEKKAGII 133

Query: 163 LQYTQTLSSP 172
             Y + L  P
Sbjct: 134 TSYYRRLLKP 143


>gi|157955305|gb|ABW06022.1| NrdF [Bacillus thuringiensis serovar aizawai]
 gi|157955352|gb|ABW06058.1| NrdF [Bacillus thuringiensis serovar colmeri]
 gi|157955372|gb|ABW06073.1| NrdF [Bacillus thuringiensis serovar indiana]
 gi|157955405|gb|ABW06098.1| NrdF [Bacillus thuringiensis serovar wuhanensis]
          Length = 322

 Score = 80.7 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 5/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W   E+ +  D   W     L+ +E++  KR LG     ++      +  +
Sbjct: 17  FWKQNIAQFWTEEEIAVSSDKNTWVQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLV 73

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             HL N + +  L      E VH+ ++ +I T+L  +E   ++F+     P +  KA   
Sbjct: 74  LVHLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFDWVDNHPLLEKKAGII 133

Query: 163 LQYTQTLSSP 172
             Y + L  P
Sbjct: 134 TSYYRRLLKP 143


>gi|157955319|gb|ABW06033.1| NrdF [Bacillus thuringiensis serovar pakistani]
          Length = 322

 Score = 80.7 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 5/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W   E+ +  D   W     L+ +E++  KR LG     ++      +  +
Sbjct: 17  FWKQNIAQFWTEEEIAVSSDKNTWVQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLV 73

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             HL N + +  L      E VH+ ++ +I T+L  +E   ++F+     P +  KA   
Sbjct: 74  LVHLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFDWVDNHPLLEKKAGII 133

Query: 163 LQYTQTLSSP 172
             Y + L  P
Sbjct: 134 TSYYRRLLKP 143


>gi|30019505|ref|NP_831136.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus
           ATCC 14579]
 gi|229043194|ref|ZP_04190917.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH676]
 gi|229078637|ref|ZP_04211194.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock4-2]
 gi|229108909|ref|ZP_04238513.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock1-15]
 gi|229126769|ref|ZP_04255781.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-Cer4]
 gi|229144056|ref|ZP_04272472.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-ST24]
 gi|296502033|ref|YP_003663733.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           thuringiensis BMB171]
 gi|29895049|gb|AAP08337.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           ATCC 14579]
 gi|157955310|gb|ABW06026.1| NrdF [Bacillus thuringiensis serovar canadensis]
 gi|157955392|gb|ABW06088.1| NrdF [Bacillus thuringiensis serovar thompsoni]
 gi|157955396|gb|ABW06091.1| NrdF [Bacillus thuringiensis serovar tohokuensis]
 gi|228639453|gb|EEK95867.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-ST24]
 gi|228656709|gb|EEL12535.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           BDRD-Cer4]
 gi|228674565|gb|EEL29805.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock1-15]
 gi|228704707|gb|EEL57136.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           Rock4-2]
 gi|228726156|gb|EEL77390.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           AH676]
 gi|296323085|gb|ADH06013.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           thuringiensis BMB171]
          Length = 322

 Score = 80.7 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 5/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W   E+ +  D   W     L+ +E++  KR LG     ++      +  +
Sbjct: 17  FWKQNIAQFWTEEEIAVSSDKNTWVQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLV 73

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             HL N + +  L      E VH+ ++ +I T+L  +E   ++F+     P +  KA   
Sbjct: 74  LVHLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFDWVDNHPLLEKKAGII 133

Query: 163 LQYTQTLSSP 172
             Y + L  P
Sbjct: 134 TSYYRRLLKP 143


>gi|75759355|ref|ZP_00739452.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|218896385|ref|YP_002444796.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           G9842]
 gi|228900033|ref|ZP_04064269.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis IBL 4222]
 gi|228920164|ref|ZP_04083513.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228964415|ref|ZP_04125529.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|74493187|gb|EAO56306.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|157955348|gb|ABW06055.1| NrdF [Bacillus thuringiensis serovar alesti]
 gi|157955356|gb|ABW06061.1| NrdF [Bacillus thuringiensis serovar dakota]
 gi|157955360|gb|ABW06064.1| NrdF [Bacillus thuringiensis serovar darmstadiensis]
 gi|157955364|gb|ABW06067.1| NrdF [Bacillus thuringiensis serovar dendrolimus]
 gi|157955380|gb|ABW06079.1| NrdF [Bacillus thuringiensis serovar ostriniae]
 gi|218545942|gb|ACK98336.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           G9842]
 gi|228795272|gb|EEM42764.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar sotto str. T04001]
 gi|228839620|gb|EEM84912.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228859647|gb|EEN04071.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus
           thuringiensis IBL 4222]
          Length = 322

 Score = 80.7 bits (198), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 5/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W   E+ +  D   W     L+ +E++  KR LG     ++      +  +
Sbjct: 17  FWKQNIAQFWTEEEIAVSSDKNTWVQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLV 73

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             HL N + +  L      E VH+ ++ +I T+L  +E   ++F+     P +  KA   
Sbjct: 74  LVHLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFDWVDNHPLLEKKAGII 133

Query: 163 LQYTQTLSSP 172
             Y + L  P
Sbjct: 134 TGYYRRLLKP 143


>gi|42780545|ref|NP_977792.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus cereus
           ATCC 10987]
 gi|42736465|gb|AAS40400.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus cereus
           ATCC 10987]
          Length = 322

 Score = 80.3 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 51/130 (39%), Gaps = 5/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W   E+ +  D   W     L+ +E++  KR LG     ++      +  +
Sbjct: 17  FWKQNIAQFWTEEEIAVSSDKNTWVQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLV 73

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             HL N + +  L      E VH+ ++ +I T+L  +E   ++F      P +  KA   
Sbjct: 74  LVHLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFEWVDNHPLLEKKAGII 133

Query: 163 LQYTQTLSSP 172
             Y + L  P
Sbjct: 134 TSYYRRLLKP 143


>gi|327493647|gb|AEA86506.1| Ribonucleotide reductase, small subunit [Campylobacter phage
           NCTC12673]
          Length = 378

 Score = 80.3 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 56/138 (40%), Gaps = 8/138 (5%)

Query: 38  KYGWAWE-----KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
           +Y W                 W P E+ M   +   KS   L +  +  IK NL F    
Sbjct: 27  RYDWYSHNQLESLDRKQQAQLWFPEEISM---IHEPKSFIELPEHNQRQIKANLTFQTLM 83

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
           +S     +   +   +++      L  QA+ E +HS ++ +II S+  +  ++F+ Y E 
Sbjct: 84  DSGQNRGLDNILIPLVTSSGLEGCLKTQAYFEYIHSRSYSHIIKSVFPNPTDVFDEYCEY 143

Query: 153 PSITAKANWALQYTQTLS 170
           P I  + N  +   ++L 
Sbjct: 144 PEIKTRINDEIDTYESLE 161


>gi|157692410|ref|YP_001486872.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus pumilus
           SAFR-032]
 gi|194015081|ref|ZP_03053698.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           pumilus ATCC 7061]
 gi|157681168|gb|ABV62312.1| ribonucleoside-diphosphate reductase beta subunit [Bacillus pumilus
           SAFR-032]
 gi|194014107|gb|EDW23672.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           pumilus ATCC 7061]
          Length = 326

 Score = 80.3 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 56/152 (36%), Gaps = 6/152 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            Y       W+P E+ +  DL  WK    L + ER    + L      ++   N  +  +
Sbjct: 21  FYNQNVKQFWLPEEISLNGDLLTWK---YLGEKERDTYMKVLAGLTLLDTEQGNTGMPIV 77

Query: 105 YRHLSNPECRQYLLRQAFEEA-VHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
             H+   + +  L   A  E  VH+ ++  I  +L   E   E+F   ++   +  KA+ 
Sbjct: 78  AEHVEGHQRKAVLNFMAMMENAVHAKSYSNIFMTLAPTETISEVFEWVKKNKFLQKKADM 137

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            +   +++         K   + +   S  F 
Sbjct: 138 IVSLYRSIQKDDPISLFKAMVASVYLESFLFY 169


>gi|48696469|ref|YP_024511.1| putative ribonucleotide reductase minor subunit [Staphylococcus
           phage K]
 gi|37729163|gb|AAO47530.1| ORF81 [Staphylococcus phage K]
 gi|119658118|gb|ABL87153.1| putative ribonucleotide reductase minor subunit [Staphylococcus
           phage 812]
 gi|182627942|gb|ACB89104.1| gp ORF111 [Staphylococcus phage A5W]
          Length = 349

 Score = 80.3 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 58/154 (37%), Gaps = 9/154 (5%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +    +  W P E  +  DL+ W   N LT+ E+   K+ L      ++      +  +
Sbjct: 32  YWEQGISQFWTPEEFDVSRDLSSW---NSLTESEKNTYKKVLAGLTGLDTKQGGEGMNLV 88

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELF---NMYREVPSITAKANW 161
             H   P+ +         E +H+ ++ +I T+L  ++   +       E   +  KA +
Sbjct: 89  SYHEPRPKYQAVFAFMGGMEEIHAKSYSHIFTTLLSNKETSYLLDTWVEENDFLKVKAQF 148

Query: 162 ALQYTQTLSSPS---FHYWNKRRRSRILTRSLRF 192
              Y   L  P+   F  +  +  S  L  +L +
Sbjct: 149 IGYYYDQLLKPNPTIFDRYMAKVASAFLESALFY 182


>gi|229160405|ref|ZP_04288403.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           R309803]
 gi|228623129|gb|EEK79957.1| Ribonucleoside-diphosphate reductase beta chain [Bacillus cereus
           R309803]
          Length = 322

 Score = 80.3 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 5/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W   E+ +  D   W     L+ +E++  KR LG     ++      +  +
Sbjct: 17  FWKQNIAQFWTEEEIAVSSDKNTWAQ---LSKEEQVAYKRVLGGLTLLDTKQGGEGMPLV 73

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             HL N + +  L      E VH+ ++ +I T+L  +E   ++F    + P +  KA   
Sbjct: 74  LVHLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFEWVDKHPLLEKKAGIV 133

Query: 163 LQYTQTLSSP 172
             Y + L  P
Sbjct: 134 TSYYRRLLKP 143


>gi|220912864|ref|YP_002488173.1| ribonucleotide-diphosphate reductase subunit beta [Arthrobacter
           chlorophenolicus A6]
 gi|219859742|gb|ACL40084.1| Ribonucleoside-diphosphate reductase [Arthrobacter chlorophenolicus
           A6]
          Length = 324

 Score = 80.3 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 61/151 (40%), Gaps = 5/151 (3%)

Query: 19  VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
           + +K  L +  +      ++     + +    NN W+P +VP+ +D+  W   N LT  E
Sbjct: 1   MTEKVKLLSHVEAINWNRIQDDKDVDVWNRLVNNFWLPEKVPLSNDVQSW---NTLTPVE 57

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           + +  R        +++      +++      P         AF E+VH+ ++  I ++L
Sbjct: 58  QQLTMRVFTGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTL 117

Query: 139 --GLDEGELFNMYREVPSITAKANWALQYTQ 167
               +  E F    E  ++  KA   + Y Q
Sbjct: 118 ASTKEIDEAFRWSTENENLQKKAQIVMDYYQ 148


>gi|323359290|ref|YP_004225686.1| ribonucleotide reductase, beta subunit [Microbacterium testaceum
           StLB037]
 gi|323275661|dbj|BAJ75806.1| ribonucleotide reductase, beta subunit [Microbacterium testaceum
           StLB037]
          Length = 324

 Score = 79.9 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 55/137 (40%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    NN W+P +VP+ +D+  W   N LT +E+ +  R        
Sbjct: 15  NWNRIQDDKDLEVWNRLVNNFWLPEKVPLSNDIQSW---NTLTPEEQTLTMRVFTGLTLL 71

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++      +++      P         AF E+VH+ ++  I ++L    +  E F    
Sbjct: 72  DTIQGTVGAVSLIPDAITPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTKEIDEAFRWST 131

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA   + Y +
Sbjct: 132 ENEFLQKKARIVMDYYR 148


>gi|163842202|ref|YP_001626607.1| ribonucleotide-diphosphate reductase subunit beta [Renibacterium
           salmoninarum ATCC 33209]
 gi|162955678|gb|ABY25193.1| ribonucleoside-diphosphate reductase beta chain [Renibacterium
           salmoninarum ATCC 33209]
          Length = 325

 Score = 79.9 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 55/136 (40%), Gaps = 5/136 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    NN W+P +VP+ +D+  W +   LT DE+ +  R        
Sbjct: 16  NWNRIQDDKDVEVWNRLVNNFWLPEKVPLSNDVQSWAT---LTPDEQQLTMRVFTGLTLL 72

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L      +++      P         AF E+VH+ ++  I ++L    +  E F    
Sbjct: 73  DTLQGTVGAVSLIPDAITPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTKEIDEAFRWSV 132

Query: 151 EVPSITAKANWALQYT 166
           E  ++  KA   + Y 
Sbjct: 133 ENENLQKKAQIVMNYY 148


>gi|307244651|ref|ZP_07526755.1| ribonucleoside-diphosphate reductase, beta subunit
           [Peptostreptococcus stomatis DSM 17678]
 gi|306492032|gb|EFM64081.1| ribonucleoside-diphosphate reductase, beta subunit
           [Peptostreptococcus stomatis DSM 17678]
          Length = 328

 Score = 79.9 bits (196), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 56/130 (43%), Gaps = 5/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W+P EVP+  D+  W     L++ ER++ KR L      ++   N+ + ++
Sbjct: 30  FWDENVKQFWLPEEVPISKDIPSWSQ---LSESERVLYKRVLAGLTLLDTKQGNDGIPSM 86

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
                N + +  L      E +H+ ++  I T+L   +   +LF    E P +  KA   
Sbjct: 87  MELTENFQRKAVLSFMGTMEEIHAKSYSSIFTTLLSKQEINDLFVWIEEEPLLQNKAKLV 146

Query: 163 LQYTQTLSSP 172
           L+  +   +P
Sbjct: 147 LRQYKNTHTP 156


>gi|310641424|ref|YP_003946182.1| ribonucleoside-diphosphate reductase beta chain [Paenibacillus
           polymyxa SC2]
 gi|309246374|gb|ADO55941.1| Ribonucleoside-diphosphate reductase beta chain [Paenibacillus
           polymyxa SC2]
          Length = 321

 Score = 79.5 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 5/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W   E+P+ DD   W +   L+D E+    + LG     +++     +  I
Sbjct: 20  FWNQNIMQFWTDDEIPLSDDKMSWVT---LSDIEKEAYMKVLGGLTLLDTIQGGVGMPQI 76

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             H+   + +  L   A  E +H+ ++  I T+L   E    +F    E P +  KA   
Sbjct: 77  MEHVDGLQRKAVLSFMAMMEQIHAKSYSSIFTTLASTEEIDGVFRWVEENPHLQTKAETI 136

Query: 163 LQYTQTLSSP 172
            QY   + +P
Sbjct: 137 RQYYMNIHTP 146


>gi|308068541|ref|YP_003870146.1| Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide
           reductase small subunit) [Paenibacillus polymyxa E681]
 gi|305857820|gb|ADM69608.1| Ribonucleoside-diphosphate reductase beta subunit (Ribonucleotide
           reductase small subunit) [Paenibacillus polymyxa E681]
          Length = 321

 Score = 79.5 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 5/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W   E+P+ DD   W +   L+D E+    + LG     +++     +  I
Sbjct: 20  FWNQNIMQFWTDDEIPLSDDKMSWVT---LSDIEKEAYMKVLGGLTLLDTIQGGVGMPQI 76

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             H+   + +  L   A  E +H+ ++  I T+L   E    +F    E P +  KA   
Sbjct: 77  MEHVDGLQRKAVLSFMAMMEQIHAKSYSSIFTTLASTEEIDGVFRWVEENPHLQTKAETI 136

Query: 163 LQYTQTLSSP 172
            QY   + +P
Sbjct: 137 RQYYMNIHTP 146


>gi|304373620|ref|YP_003858365.1| NrdB ribonucleotide reductase B subunit [Enterobacteria phage RB16]
 gi|299829576|gb|ADJ55369.1| NrdB ribonucleotide reductase B subunit [Enterobacteria phage RB16]
          Length = 391

 Score = 79.5 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 67/182 (36%), Gaps = 3/182 (1%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           L+ +       +++        + V +    K+           +  W P E+ +  D  
Sbjct: 2   LTVMNTNPDHKHLEQPMFFGEDTGVARYEEQKHRVFENLTEKQLSFFWRPEEIDLSIDRM 61

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +     + + E+++   NL +    +++      LA     S+     ++   AF E +
Sbjct: 62  QYAK---MPEHEKIIFDSNLQYQTLLDTIQGRGPNLAFLPIASDVSMETWIETWAFSETI 118

Query: 127 HSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRIL 186
           HS ++ +I  +L +D  + F+      +I  ++    +Y   L +      N   +  +L
Sbjct: 119 HSRSYTHIQRNLHIDPSKEFDKILRNEAIMKRSASMTKYYDDLIAECHELKNIVLKIEML 178

Query: 187 TR 188
           T 
Sbjct: 179 TS 180


>gi|255535950|ref|YP_003096321.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Flavobacteriaceae bacterium 3519-10]
 gi|255342146|gb|ACU08259.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
           [Flavobacteriaceae bacterium 3519-10]
          Length = 324

 Score = 79.5 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 61/160 (38%), Gaps = 9/160 (5%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
                P +Y    +   +   + W+ +EV    D+  ++S   L   E+  +K  L   A
Sbjct: 7   RIGYKPFEYPEIMQFVEAINKSFWVHSEVDFTADVQDFQS--QLEPHEKNAVKNALLAIA 64

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
             E  V       +Y HL  PE        A  E  HS  +  ++  LG ++   FN   
Sbjct: 65  QIEVSVKTFWG-NLYNHLPKPELNGLGSTFAECEFRHSEAYSRLLEVLGYNDA--FNHVV 121

Query: 151 EVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSL 190
           E+P+I  + ++     +  +S       K   S +L  S+
Sbjct: 122 EIPAIKKRIDFLSNVLKHANS----TTPKEYVSSLLLFSI 157


>gi|157955332|gb|ABW06043.1| NrdF [Bacillus thuringiensis serovar galleriae]
 gi|157955344|gb|ABW06052.1| NrdF [Bacillus thuringiensis serovar tolworthi]
          Length = 322

 Score = 79.5 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 5/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W   E+ +  D   W     L+ +E++  KR LG     ++      +  +
Sbjct: 17  FWKQNIAQFWTEEEIAVSSDKNTWVQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLV 73

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             HL N + +  L      E VH+ ++ +I T+L  +E   ++F+     P +  KA   
Sbjct: 74  LVHLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFDWVDNHPLLEKKAGII 133

Query: 163 LQYTQTLSSP 172
             Y + L  P
Sbjct: 134 TSYHRRLLKP 143


>gi|157955376|gb|ABW06076.1| NrdF [Bacillus thuringiensis serovar morrisoni]
          Length = 322

 Score = 79.5 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 5/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W   E+ +  D   W     L+ +E++  KR LG     ++      +  +
Sbjct: 17  FWKQNIAQFWTEEEIAVSSDKNTWVQ---LSKEEQIAYKRVLGGLTLLDTKQGGEGMPLV 73

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             HL N + +  L      E VH+ ++ +I T+L  +E   ++F+     P +  KA   
Sbjct: 74  LVHLENLQAKSVLAFMGAMEEVHAKSYSHIFTTLATEEEIDDIFDWVDNHPLLEKKAGII 133

Query: 163 LQYTQTLSSP 172
             Y + L  P
Sbjct: 134 TSYHRRLLKP 143


>gi|308172806|ref|YP_003919511.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus
           amyloliquefaciens DSM 7]
 gi|307605670|emb|CBI42041.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           amyloliquefaciens DSM 7]
          Length = 327

 Score = 79.1 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 54/152 (35%), Gaps = 6/152 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            Y       W+P E+ +  DL  WK    L   E+    R L      ++   N  +  I
Sbjct: 24  FYAQNVKQFWLPEEISLNGDLLSWK---ALGPAEQTTYMRGLAGLTLLDTEQGNTGMPII 80

Query: 105 YRHLSNPECRQYLLRQAFEEA-VHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
            +H++  + +  L   A  E  VH+ ++  I  +L   E   E+F   +  P +  KA  
Sbjct: 81  AKHIAGHQRKAVLNFMAMMENAVHAKSYSNIFMTLAPTETINEVFEWVKTNPYLQRKAAL 140

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
                + +         K   + +   S  F 
Sbjct: 141 ITGLYRDIKEGDAISLYKALVASVYLESFLFY 172


>gi|227496669|ref|ZP_03926945.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces
           urogenitalis DSM 15434]
 gi|226833817|gb|EEH66200.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces
           urogenitalis DSM 15434]
          Length = 324

 Score = 79.1 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 56/152 (36%), Gaps = 6/152 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W +   L + E+ M  R        +++      ++
Sbjct: 26  EVWDRLTGNFWLPEKVPLSNDVQSWAT---LNEAEKNMTTRVFTGLTLLDTIQGTVGAVS 82

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELFNMYREVPSITAKANW 161
           +      P         AF E+VH+ ++  I ++L    +  E F    E  ++  KA  
Sbjct: 83  LIPDARTPHEEAVYTNIAFMESVHARSYSSIFSTLISTAEIDEAFRWSEENENLQRKAKI 142

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            L Y +    P             L  S  + 
Sbjct: 143 ILDYYRG-DDPEKRKVASTMLESFLFYSGFYA 173


>gi|197284313|ref|YP_002150185.1| ribonucleotide-diphosphate reductase subunit beta [Proteus
           mirabilis HI4320]
 gi|194681800|emb|CAR41036.1| ribonucleoside-diphosphate reductase beta chain [Proteus mirabilis
           HI4320]
          Length = 322

 Score = 79.1 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 57/144 (39%), Gaps = 5/144 (3%)

Query: 27  ARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNL 86
           +R +      ++     E +     N W+P ++P+ +D+  W   N LT  E+ +  R  
Sbjct: 7   SRVNAINWNRIEDEKDLEVWNRLTMNFWLPEKIPLSNDIPSW---NTLTQAEKQLTIRVF 63

Query: 87  GFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGE 144
                 +++        +      P     L    F EAVH+ ++  I ++L L  D  +
Sbjct: 64  TGLTLLDTIQNTVGAPTLMPDAQTPHEEAVLSNICFMEAVHARSYSSIFSTLCLTTDVDD 123

Query: 145 LFNMYREVPSITAKANWALQYTQT 168
            +    E   +  K++  L+Y Q 
Sbjct: 124 AYRWSEENTYLQKKSDIILRYYQD 147


>gi|289178104|gb|ADC85350.1| Ribonucleoside-diphosphate reductase beta chain [Bifidobacterium
           animalis subsp. lactis BB-12]
          Length = 326

 Score = 79.1 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 52/126 (41%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W+    ++D E  +  R        +++      ++
Sbjct: 28  EVWDRLTGNFWLPEKVPVSNDIPDWRQ---MSDAEHTLTMRVFTGLTLLDTIQGTVGAVS 84

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +      P         AF E+VH+ ++  I ++L       E F+   + P +  KA  
Sbjct: 85  LIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTREIDEAFDWSEKNPHLQRKAQI 144

Query: 162 ALQYTQ 167
            L Y +
Sbjct: 145 VLDYYE 150


>gi|227358546|ref|ZP_03842871.1| ribonucleoside-diphosphate reductase beta chain [Proteus mirabilis
           ATCC 29906]
 gi|227161257|gb|EEI46331.1| ribonucleoside-diphosphate reductase beta chain [Proteus mirabilis
           ATCC 29906]
          Length = 337

 Score = 79.1 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 57/144 (39%), Gaps = 5/144 (3%)

Query: 27  ARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNL 86
           +R +      ++     E +     N W+P ++P+ +D+  W   N LT  E+ +  R  
Sbjct: 22  SRVNAINWNRIEDEKDLEVWNRLTMNFWLPEKIPLSNDIPSW---NTLTQAEKQLTIRVF 78

Query: 87  GFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGE 144
                 +++        +      P     L    F EAVH+ ++  I ++L L  D  +
Sbjct: 79  TGLTLLDTIQNTVGAPTLMPDAQTPHEEAVLSNICFMEAVHARSYSSIFSTLCLTTDVDD 138

Query: 145 LFNMYREVPSITAKANWALQYTQT 168
            +    E   +  K++  L+Y Q 
Sbjct: 139 AYRWSEENTYLQKKSDIILRYYQD 162


>gi|111023403|ref|YP_706375.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus
           jostii RHA1]
 gi|110822933|gb|ABG98217.1| ribonucleotide reductase [Rhodococcus jostii RHA1]
          Length = 321

 Score = 79.1 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 52/126 (41%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W     LT  E+ +  R        +++      ++
Sbjct: 23  EVWDRLVGNFWLPEKVPVSNDIPSW---GTLTPQEKQLTMRVFTGLTLLDTIQGTVGAVS 79

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANW 161
           +      P         AF E+VH+ ++  I ++L    D  + F    E P++  KA  
Sbjct: 80  LIPDAITPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTRDIDDAFRWSEENPNLQRKAEI 139

Query: 162 ALQYTQ 167
            + Y Q
Sbjct: 140 VMDYYQ 145


>gi|323495950|ref|ZP_08101016.1| ribonucleoside-diphosphate reductase subunit beta [Vibrio
           sinaloensis DSM 21326]
 gi|323318985|gb|EGA71930.1| ribonucleoside-diphosphate reductase subunit beta [Vibrio
           sinaloensis DSM 21326]
          Length = 323

 Score = 78.7 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 56/156 (35%), Gaps = 5/156 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +     N W+P +VP+ +D+  WK    LT++E+ +  R        
Sbjct: 13  NWNRMQDDKDLEIWNRLTVNFWLPEKVPLSNDIQTWKQ---LTEEEQTLTIRVFTGLTLL 69

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYR 150
           +++       A+      P     L   AF EAVH+ ++  + +++       E F    
Sbjct: 70  DTIQNTVGAPALMADARTPHEEAVLTNIAFMEAVHARSYSSVFSTMCTTPQIDEAFRWAD 129

Query: 151 EVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRIL 186
           E P +  KA   L+       P             L
Sbjct: 130 ENPLLQKKAQLVLEDYLAQGDPLKKKVASVFLESFL 165


>gi|183601891|ref|ZP_02963260.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           animalis subsp. lactis HN019]
 gi|219682805|ref|YP_002469188.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           animalis subsp. lactis AD011]
 gi|241190381|ref|YP_002967775.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           animalis subsp. lactis Bl-04]
 gi|241195787|ref|YP_002969342.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           animalis subsp. lactis DSM 10140]
 gi|183218776|gb|EDT89418.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           animalis subsp. lactis HN019]
 gi|219620455|gb|ACL28612.1| ribonucleoside-diphosphate reductase 2 beta chain [Bifidobacterium
           animalis subsp. lactis AD011]
 gi|240248773|gb|ACS45713.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           animalis subsp. lactis Bl-04]
 gi|240250341|gb|ACS47280.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           animalis subsp. lactis DSM 10140]
 gi|295793368|gb|ADG32903.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           animalis subsp. lactis V9]
          Length = 321

 Score = 78.7 bits (193), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 52/126 (41%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W+    ++D E  +  R        +++      ++
Sbjct: 23  EVWDRLTGNFWLPEKVPVSNDIPDWRQ---MSDAEHTLTMRVFTGLTLLDTIQGTVGAVS 79

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +      P         AF E+VH+ ++  I ++L       E F+   + P +  KA  
Sbjct: 80  LIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTREIDEAFDWSEKNPHLQRKAQI 139

Query: 162 ALQYTQ 167
            L Y +
Sbjct: 140 VLDYYE 145


>gi|226312721|ref|YP_002772615.1| ribonucleotide-diphosphate reductase subunit beta [Brevibacillus
           brevis NBRC 100599]
 gi|226095669|dbj|BAH44111.1| ribonucleoside-diphosphate reductase beta chain [Brevibacillus
           brevis NBRC 100599]
          Length = 316

 Score = 78.7 bits (193), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 54/150 (36%), Gaps = 6/150 (4%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W   E+P+ DD   W     L+  ER   K+ LG     +++     +  I
Sbjct: 17  FWNQNIMQFWTDDEIPLSDDKMAW---MELSATERDTYKKVLGGLTLLDTVQGGVGMPKI 73

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             H+   + +  L      E +H+ ++  I T+L   E    +F+     P +  KA   
Sbjct: 74  MEHVDGLQRKAVLAFMGMMEQIHAKSYSSIFTTLASTEEIDGIFSWVENNPHLQKKAALI 133

Query: 163 LQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
            +  Q +  P   Y      S  L   L +
Sbjct: 134 SKRYQEIEKPKDLYMAMVA-SVFLESYLFY 162


>gi|66391516|ref|YP_239041.1| NrdB ribonucleotide reductase B subunit [Enterobacteria phage RB43]
 gi|62288604|gb|AAX78587.1| NrdB ribonucleotide reductase B subunit [Enterobacteria phage RB43]
          Length = 391

 Score = 78.7 bits (193), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 61/163 (37%), Gaps = 3/163 (1%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           L+ +       +++        + V +    K+           +  W P EV +  D  
Sbjct: 2   LTVMNTNPDHKHLEQPMFFGEDTGVARYEEQKHRVFETLTEKQLSFFWRPEEVDLSIDRM 61

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +     + + E+++   NL +    +++      LA     S+     ++   AF E +
Sbjct: 62  QYAK---MPEHEKIIFDSNLQYQTLLDTIQGRGPNLAFLPIASDVSMETWIETWAFSETI 118

Query: 127 HSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           HS ++ +I  +L +D  + F+      +I  ++    +Y   L
Sbjct: 119 HSRSYTHIQRNLHIDPAKEFDKILRNEAIMKRSASMTKYYDDL 161


>gi|254489413|ref|ZP_05102616.1| ribonucleoside-diphosphate reductase, beta subunit [Roseobacter sp.
           GAI101]
 gi|214041920|gb|EEB82560.1| ribonucleoside-diphosphate reductase, beta subunit [Roseobacter sp.
           GAI101]
          Length = 324

 Score = 78.3 bits (192), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 57/142 (40%), Gaps = 5/142 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +     N W+P +VP+ +D+  W +   L  DER +  R L      
Sbjct: 15  NWNRIQDDKDLEVWNRLTVNFWLPEKVPLSNDVQSWAT---LKPDERTLTIRVLTGLTLL 71

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++       ++      P     L   AF EAVH+ ++  I ++L    +  + F    
Sbjct: 72  DTIQNTVGAPSLMPDAQTPHEEAVLTNIAFMEAVHARSYSSIFSTLCSTKEVDDAFRWSE 131

Query: 151 EVPSITAKANWALQYTQTLSSP 172
           + P + AK+   LQ     + P
Sbjct: 132 DNPHLQAKSRLILQEYNATADP 153


>gi|10957415|ref|NP_051641.1| ribonucleotide-diphosphate reductase subunit beta [Deinococcus
           radiodurans R1]
 gi|6460844|gb|AAF12548.1|AE001826_17 ribonucleoside-diphosphate reductase, beta chain [Deinococcus
           radiodurans R1]
          Length = 354

 Score = 78.3 bits (192), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 69/190 (36%), Gaps = 18/190 (9%)

Query: 17  VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNH------------WMPTEVPMQDD 64
           VN+   R+  +   +N  +P+   ++   +    +N             W P E+P+ +D
Sbjct: 4   VNIQPDRVFGSPQPINNEVPMT-PFSAANWSEPEDNFSATFYAKYTSQLWFPEEIPLTND 62

Query: 65  LALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEE 124
              WK+   L+D+ER           + ++L     +  +   +     +  L  Q   E
Sbjct: 63  ALAWKT---LSDEERWTYIHASAGLNALDTLQGEVGMPRLRDLVDGHIRKATLQFQGMME 119

Query: 125 AVHSHTFQYIITSLGL--DEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRR 182
            +H+ ++  +  +     +E E+F   R  P +  K        +         W K   
Sbjct: 120 DIHARSYSLMNKTFLTASEEREVFEWVRTQPQLQHKIAVIQGVYRDPDVSDLGVWKKLVV 179

Query: 183 SRILTRSLRF 192
           S +L  +L +
Sbjct: 180 SCMLETALFY 189


>gi|32453719|ref|NP_861928.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage
           RB69]
 gi|32350538|gb|AAP76137.1| NrdB aerobic NDP reductase, small subunit [Enterobacteria phage
           RB69]
          Length = 390

 Score = 78.3 bits (192), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 51/117 (43%), Gaps = 3/117 (2%)

Query: 53  HWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPE 112
            W P EV +  D A +   N L   ++ +   NL + +  +S+        +   +S+P 
Sbjct: 46  FWRPEEVNLMLDSAQF---NKLPQFQQDICTNNLKYQSLLDSIQGRAPSAVLMALISDPS 102

Query: 113 CRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
              ++    F E +HS ++ +I+ +L  D  ++F+      +I  +A    +Y   +
Sbjct: 103 LDTWVATWTFSETIHSRSYTHIMRNLYTDPSKVFDEIVLDEAIMKRAESIGKYYDDV 159


>gi|194015457|ref|ZP_03054073.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           pumilus ATCC 7061]
 gi|194012861|gb|EDW22427.1| ribonucleoside-diphosphate reductase, beta subunit [Bacillus
           pumilus ATCC 7061]
          Length = 329

 Score = 78.3 bits (192), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 54/152 (35%), Gaps = 6/152 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            Y       W+P E+ +  DL  WK    LT  ER    + L      ++   N  + AI
Sbjct: 26  FYDQNVKQFWLPEEISLNGDLLAWKD---LTPAERDTYMKVLAGLTLLDTEQGNTGMPAI 82

Query: 105 YRHLSNPECRQYLLRQAFEEA-VHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
             H+   + +  L   A  E  VH+ ++  I  +L   E    +F   +E   +  KA  
Sbjct: 83  MAHVDGHQRKAVLNFMAMMENAVHAKSYSNIFLTLAPSETITAVFEWVKENRYLQRKAKL 142

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
                + + +       K   + +   S  F 
Sbjct: 143 ITDLYRDIKAGDDISLYKAMVASVYLESFLFY 174


>gi|262203177|ref|YP_003274385.1| ribonucleoside-diphosphate reductase [Gordonia bronchialis DSM
           43247]
 gi|262086524|gb|ACY22492.1| Ribonucleoside-diphosphate reductase [Gordonia bronchialis DSM
           43247]
          Length = 334

 Score = 78.3 bits (192), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W   N LT+ E+ +  R        +++      ++
Sbjct: 36  EVWDRLTGNFWLPEKVPVSNDIPSW---NTLTEYEKQLTMRVFTGLTLLDTIQGTVGAVS 92

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANW 161
           +    + P     L   AF E+VH+ ++  I ++L    +  E F    E   +  KA  
Sbjct: 93  LIPDATTPHEEAVLTNIAFMESVHAKSYSSIFSTLCSTKEIDEAFRWSEENDQLQRKAQI 152

Query: 162 ALQYTQ 167
            + Y +
Sbjct: 153 VMDYYR 158


>gi|34419511|ref|NP_899524.1| aerobic ribonucleoside diphosphate reductase small subunit [Vibrio
           phage KVP40]
 gi|34333192|gb|AAQ64347.1| aerobic ribonucleoside diphosphate reductase small subunit [Vibrio
           phage KVP40]
          Length = 374

 Score = 78.3 bits (192), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 65/162 (40%), Gaps = 3/162 (1%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
             I    K  ++     L    ++++   +K+G   +      +  W P EV +  D   
Sbjct: 3   KTIFNKNKVDHLGQPLFLGEDPNISRFETVKHGVFEQLTEKQLSFFWRPEEVDLTLDSQE 62

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           +   + + +  + +  +NL + +  +S+      +A     S+     ++    F E +H
Sbjct: 63  F---DRMPEHWKHVFTQNLKYQSLLDSVQGRAPNIAFLPICSDNSLENWITTWDFSETIH 119

Query: 128 SHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           S ++ +I+ +L  +   +F+      SI A+A    ++   L
Sbjct: 120 SRSYTHIMRNLYSNPSAVFDEIVLDKSIMARAEAVTEHYDKL 161


>gi|56964873|ref|YP_176604.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus clausii
           KSM-K16]
 gi|56911116|dbj|BAD65643.1| ribonucleoside-diphosphate reductase beta chain [Bacillus clausii
           KSM-K16]
          Length = 334

 Score = 78.0 bits (191), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 55/152 (36%), Gaps = 6/152 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            Y       W+P EV +  DL  WK    LT  E+    + L      ++   N  +  +
Sbjct: 21  FYNQNVKQFWLPEEVALNGDLLTWK---YLTPAEKDTYMKVLAGLTLLDTEQGNTGMPLV 77

Query: 105 YRHLSNPECRQYLLRQAFEEA-VHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
             H+   + +  L   A  E  VH+ ++  I  +L   E   +LF   +  P +  KAN 
Sbjct: 78  AEHVQGHQRKAVLNFMAMMENAVHAKSYSNIFMTLATSEEINDLFEWVKVNPRLQKKANT 137

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            +   + +         K   + +   S  F 
Sbjct: 138 IVSIYKDIKRGDDISLFKALVASVYLESFLFY 169


>gi|315654326|ref|ZP_07907234.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           curtisii ATCC 51333]
 gi|315657771|ref|ZP_07910651.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           curtisii subsp. holmesii ATCC 35242]
 gi|315491361|gb|EFU80978.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           curtisii ATCC 51333]
 gi|315491568|gb|EFU81179.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           curtisii subsp. holmesii ATCC 35242]
          Length = 322

 Score = 78.0 bits (191), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 60/163 (36%), Gaps = 6/163 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +     N W+P ++P+ +D+  WK+   L +DE+ M  R        
Sbjct: 13  NWNDIEDDKDLEVWDRLTGNFWLPEKIPLSNDIPSWKT---LNEDEKNMTNRVFTGLTLL 69

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYR 150
           +++      +++      P         AF E+VH+ ++  + ++L   E   E F    
Sbjct: 70  DTIQGTVGAVSLIPDSRTPHEEAVYTNIAFMESVHAKSYSSVFSTLLSTEEINESFRWSE 129

Query: 151 EVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           E   +  KA+  L Y    + P             L  S  + 
Sbjct: 130 ENEYLQKKAHIVLDYYHG-NDPEKRKVASTMLESFLFYSGFYA 171


>gi|261342124|ref|ZP_05969982.1| ribonucleoside-diphosphate reductase, beta subunit [Enterobacter
           cancerogenus ATCC 35316]
 gi|288315455|gb|EFC54393.1| ribonucleoside-diphosphate reductase, beta subunit [Enterobacter
           cancerogenus ATCC 35316]
          Length = 319

 Score = 78.0 bits (191), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 58/138 (42%), Gaps = 5/138 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKIQDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSHAEQQLTIRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++       A+      P     +   +F EAVH+ ++  I ++L    D    ++   
Sbjct: 67  DTIQNTVGAPALMSDALTPHEEAVMSNISFMEAVHARSYSSIFSTLCQTKDVDTAYDWSE 126

Query: 151 EVPSITAKANWALQYTQT 168
           E  S+  KAN  L+Y Q 
Sbjct: 127 ECESLQRKANLVLEYYQA 144


>gi|152964774|ref|YP_001360558.1| ribonucleotide-diphosphate reductase subunit beta [Kineococcus
           radiotolerans SRS30216]
 gi|151359291|gb|ABS02294.1| Ribonucleoside-diphosphate reductase [Kineococcus radiotolerans
           SRS30216]
          Length = 323

 Score = 78.0 bits (191), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 60/149 (40%), Gaps = 5/149 (3%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           +K  L  R +      L+     E +    +N W+P +VP+ +D+  W++   L   ER 
Sbjct: 2   EKLKLVDRVNAINWNRLQDDKDLEIWNRLTSNFWLPEKVPLSNDVQSWQN---LGAQERT 58

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
           +  R        +++      +++      P         AF E+VH+ ++  I ++L  
Sbjct: 59  LTLRVFTGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHARSYSSIFSTLAT 118

Query: 141 DE--GELFNMYREVPSITAKANWALQYTQ 167
                E F    +  ++  KA+  L+Y  
Sbjct: 119 TREIDEAFAWSEDNEALQRKASIVLEYYH 147


>gi|311993225|ref|YP_004010091.1| aerobic NDP reductase, small subunit [Enterobacteria phage CC31]
 gi|284178063|gb|ADB81729.1| aerobic NDP reductase, small subunit [Enterobacteria phage CC31]
          Length = 379

 Score = 78.0 bits (191), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 53/132 (40%), Gaps = 3/132 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           ++    E      +  W P EV +  D A ++    L   ++ +   NL + +  +S+  
Sbjct: 20  RHRTFEELIEKQLSFFWRPEEVNLMTDRAQFEK---LPVGQQNVFLDNLKYQSLLDSIQG 76

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
                 +   +S+P    +     F E +HS ++ +I+ +L  D  ++F+      +I  
Sbjct: 77  RAPAAVLSALISDPSLDTWNQTWTFSETIHSRSYTHIMRNLLNDPAKVFDEIVLDEAIMK 136

Query: 158 KANWALQYTQTL 169
           +A     Y   +
Sbjct: 137 RAETIGHYYDDV 148


>gi|325284717|ref|YP_004264180.1| Ribonucleoside-diphosphate reductase [Deinococcus proteolyticus
           MRP]
 gi|324316206|gb|ADY27320.1| Ribonucleoside-diphosphate reductase [Deinococcus proteolyticus
           MRP]
          Length = 348

 Score = 78.0 bits (191), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 59/157 (37%), Gaps = 16/157 (10%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN--- 98
            +EKY S     W P E+P+ +D  +WKS   L++ ER           + ++L      
Sbjct: 24  FYEKYTSQL---WFPEEIPLSNDAIVWKS---LSEAERWTYIHASAGLNALDTLQGEVGM 77

Query: 99  -NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYREVPSI 155
             +   +  H+     +     Q   E +H+ ++  +  +     +E E+F   R  P +
Sbjct: 78  PALRHLVDGHIRKATIQ----FQGMMEDIHAKSYSLMNKTFLTTSEEREVFEWVRTQPQL 133

Query: 156 TAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             K     +        +   W K   S +L  +L +
Sbjct: 134 QNKIAMIREIYDNPDVSNLGLWKKMVVSCMLETALFY 170


>gi|317506846|ref|ZP_07964618.1| ribonucleotide reductase [Segniliparus rugosus ATCC BAA-974]
 gi|316254774|gb|EFV14072.1| ribonucleotide reductase [Segniliparus rugosus ATCC BAA-974]
          Length = 332

 Score = 78.0 bits (191), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 63/163 (38%), Gaps = 9/163 (5%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           + P++    +   D  +++ A         +      E +     N W+P +VP+ +D+ 
Sbjct: 1   MHPLETESSQKAPDKVKLVRA----INWNRVVDEKDSEVWDRLVGNFWLPEKVPLSNDIQ 56

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            W +   L + E+ +  R        +++      +++      P         AF E+V
Sbjct: 57  SWHT---LNEHEQQLTMRVFTGLTLLDTIQGAVGAVSLIPDALTPHEEAVYTNIAFMESV 113

Query: 127 HSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQ 167
           H+ ++  I ++L       E F    E P++  KA   L+  +
Sbjct: 114 HAKSYSSIFSTLSNTPEIDEAFRWSEENPNLQRKAAIVLERYR 156


>gi|293193572|ref|ZP_06609842.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces
           odontolyticus F0309]
 gi|292819928|gb|EFF78930.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces
           odontolyticus F0309]
          Length = 320

 Score = 77.6 bits (190), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 60/163 (36%), Gaps = 6/163 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +     N W+P ++P+ +DL  WK+   LT DE+LM  R        
Sbjct: 11  NWNKIQDDKDLEVWDRLTGNFWLPEKIPLSNDLPSWKT---LTKDEQLMTNRVFTGLTLL 67

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYR 150
           ++L      +++      P         AF E+VH+ ++  I ++L   E   E F    
Sbjct: 68  DTLQGTVGAVSLIPDARTPHEEAVYTNIAFMESVHAKSYSSIFSTLLSTEEINESFRWSN 127

Query: 151 EVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           E  ++  KA     Y    + P             L  S  + 
Sbjct: 128 ENEALQKKAEIVKSYYDG-NDPEKRKVASTMLESFLFYSGFYA 169


>gi|329945141|ref|ZP_08293009.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces sp.
           oral taxon 170 str. F0386]
 gi|328529340|gb|EGF56255.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces sp.
           oral taxon 170 str. F0386]
          Length = 324

 Score = 77.6 bits (190), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 57/152 (37%), Gaps = 6/152 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W +   L + E+ M  R        +++      ++
Sbjct: 26  EVWDRLTGNFWLPEKVPLSNDVQSWAT---LNEAEKNMTTRVFTGLTLLDTIQGTVGAVS 82

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELFNMYREVPSITAKANW 161
           +      P     L   AF E+VH+ ++  I ++L    +  E F    E  ++  KA  
Sbjct: 83  LIPDARTPHEEAVLTNIAFMESVHARSYSSIFSTLISTAEIDEAFRWSEENENLQRKARI 142

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            L Y +    P             L  S  + 
Sbjct: 143 ILDYYRG-DDPEKRKVASTMLESFLFYSGFYA 173


>gi|320531976|ref|ZP_08032874.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces sp.
           oral taxon 171 str. F0337]
 gi|320135808|gb|EFW27858.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces sp.
           oral taxon 171 str. F0337]
          Length = 324

 Score = 77.6 bits (190), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 57/152 (37%), Gaps = 6/152 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W +   L + E+ M  R        +++      ++
Sbjct: 26  EVWDRLTGNFWLPEKVPLSNDVQSWAT---LNEAEKNMTTRVFTGLTLLDTIQGTVGAVS 82

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELFNMYREVPSITAKANW 161
           +      P     L   AF E+VH+ ++  I ++L    +  E F    E  ++  KA  
Sbjct: 83  LIPDARTPHEEAVLTNIAFMESVHARSYSSIFSTLISTAEIDEAFRWSEENENLQRKARI 142

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            L Y +    P             L  S  + 
Sbjct: 143 ILDYYRG-DDPEKRKVASTMLESFLFYSGFYA 173


>gi|298345735|ref|YP_003718422.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           curtisii ATCC 43063]
 gi|304390565|ref|ZP_07372518.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           curtisii subsp. curtisii ATCC 35241]
 gi|298235796|gb|ADI66928.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           curtisii ATCC 43063]
 gi|304326321|gb|EFL93566.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           curtisii subsp. curtisii ATCC 35241]
          Length = 322

 Score = 77.6 bits (190), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 59/161 (36%), Gaps = 5/161 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +     N W+P ++P+ +D+  WK+   L +DE+ M  R        
Sbjct: 13  NWNDIEDDKDLEVWDRLTGNFWLPEKIPLSNDIPSWKT---LNEDEKNMTNRVFTGLTLL 69

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYR 150
           +++      +++      P         AF E+VH+ ++  + ++L   E   E F    
Sbjct: 70  DTIQGTVGAVSLIPDSRTPHEEAVYTNIAFMESVHAKSYSSVFSTLLSTEEIKESFRWSE 129

Query: 151 EVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLR 191
           E   +  KA+  L Y     S      +    S +      
Sbjct: 130 ENEYLQKKAHIVLDYYHGNDSEKRKVASTMLESFLFYSGFY 170


>gi|76803441|ref|YP_327710.1| ribonucleoside-diphosphate reductase, beta subunit 1 [Natronomonas
           pharaonis DSM 2160]
 gi|76559256|emb|CAI50863.1| ribonucleoside-diphosphate reductase, beta subunit 1 [Natronomonas
           pharaonis DSM 2160]
          Length = 336

 Score = 77.6 bits (190), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 61/149 (40%), Gaps = 5/149 (3%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
           S+  QL P +Y    +   +  N++W+ TE     D+  +++    T  E+ +IKR +  
Sbjct: 17  SERTQLKPYEYADFLDYKDAIRNSYWVHTEFNFSGDVQDFRTNT--TPAEKTVIKRTMLA 74

Query: 89  FASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNM 148
            A  E  V       IY  +   E     +  A  E  H   + +++  LG+ E   F  
Sbjct: 75  IAQIEVQVKTFWAD-IYDEMPKTEVGNVGMTFAESEVRHMDAYSHLLDILGITED--FEE 131

Query: 149 YREVPSITAKANWALQYTQTLSSPSFHYW 177
             +VP+I  +  +  +Y +   S     +
Sbjct: 132 VTDVPAIEDRIEYLDKYLEKSESDDKQEY 160


>gi|326333061|ref|ZP_08199312.1| ribonucleoside-diphosphate reductase, beta subunit [Nocardioidaceae
           bacterium Broad-1]
 gi|325949135|gb|EGD41224.1| ribonucleoside-diphosphate reductase, beta subunit [Nocardioidaceae
           bacterium Broad-1]
          Length = 334

 Score = 77.6 bits (190), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 51/128 (39%), Gaps = 4/128 (3%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
             Y  A +      +  W   E+P+++D   +     +TD E+  +K  L  F   E ++
Sbjct: 20  FDYPMAEDLAKKQRSIFWTAEEIPVENDKQDF--LVNMTDAEQAAVKTTLKLFTIYELIL 77

Query: 97  -ANNIVLAIYRHLSNPECRQYLLRQAFEE-AVHSHTFQYIITSLGLDEGELFNMYREVPS 154
                   ++     PE +      +F E  +H+  +  +  +L +D  E ++ Y+  P 
Sbjct: 78  GGEVWGDRLFHAFPRPEIQMMTNAFSFAELNMHAPFYAKLNKTLMIDTEEFYDSYKNDPV 137

Query: 155 ITAKANWA 162
           +  +  + 
Sbjct: 138 LAERIAFV 145


>gi|257373022|ref|YP_003175796.1| ribonucleotide reductase [Halomicrobium mukohataei DSM 12286]
 gi|257167746|gb|ACV49438.1| ribonucleotide reductase [Halomicrobium mukohataei DSM 12286]
          Length = 336

 Score = 77.6 bits (190), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 37/164 (22%), Positives = 63/164 (38%), Gaps = 13/164 (7%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
           S+  QL P +Y    E   +  N++W+ TE     D+  +K     T  E+ +IKR +  
Sbjct: 17  SERTQLKPYEYPDVLEYKDAIRNSYWVHTEFNFSGDVQDFKVNT--TPAEKAVIKRTMLA 74

Query: 89  FASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNM 148
            A  E  V       IY  +   E     +  A  E  H   + +++  LG+ E   F  
Sbjct: 75  IAQIEVQVKTFWAD-IYDEMPKAEVGNVGMTFAESEVRHMDAYSHLLDILGITED--FEE 131

Query: 149 YREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             +VP+I  + ++  +Y +   S              +   L F
Sbjct: 132 VTDVPAIEERIDYLDEYLEKSES--------DDTQEYVMSLLLF 167


>gi|66391280|ref|YP_238601.1| ORF025 [Staphylococcus phage Twort]
 gi|62637210|gb|AAX92321.1| ORF025 [Staphylococcus phage Twort]
          Length = 349

 Score = 77.6 bits (190), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 65/157 (41%), Gaps = 9/157 (5%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
           A   +  A  + W+P +  +  D++ W   N LTD E+   K+ L      ++  +   +
Sbjct: 30  ANNFWELATTSFWLPEDFDISRDVSSW---NKLTDIEKDTYKKVLAGLTGLDTKQSVEGM 86

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELF---NMYREVPSITAK 158
             I  H       Q      F E++H+ ++ +I T+L L++   +       + P +  K
Sbjct: 87  SLIAHHEPRTRFAQVYTAFDFYESIHAKSYSHIFTTLLLNKETNYLLNEWVEQEPHLKKK 146

Query: 159 ANWALQYTQTLSSP---SFHYWNKRRRSRILTRSLRF 192
           A +   + + L  P   +F  +  +  S  L  +L +
Sbjct: 147 AQYIGYFYEKLEQPNPSTFDRYMAKVASAFLESALFY 183


>gi|260426338|ref|ZP_05780317.1| ribonucleoside-diphosphate reductase, beta subunit [Citreicella sp.
           SE45]
 gi|260420830|gb|EEX14081.1| ribonucleoside-diphosphate reductase, beta subunit [Citreicella sp.
           SE45]
          Length = 324

 Score = 77.6 bits (190), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 53/133 (39%), Gaps = 5/133 (3%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
                   L+     E +     N W+P +VP+ +D+  W +   LT +E+ +  R    
Sbjct: 11  PRAINWNRLQDDKDLEVWNRLTVNFWLPEKVPLSNDVPSWAT---LTPEEQRLTIRVFTG 67

Query: 89  FASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELF 146
               +++       A+      P     L   AF EAVH+ ++  I ++L    +  E F
Sbjct: 68  LTLLDTIQNAVGAPAMMPDAQTPHEEAVLTNIAFMEAVHARSYSSIFSTLCSTREVDEAF 127

Query: 147 NMYREVPSITAKA 159
               E P + AKA
Sbjct: 128 RWSDENPHLQAKA 140


>gi|226365904|ref|YP_002783687.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus
           opacus B4]
 gi|226244394|dbj|BAH54742.1| ribonucleoside-diphosphate reductase beta chain [Rhodococcus opacus
           B4]
          Length = 321

 Score = 77.6 bits (190), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 52/126 (41%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W     LT  E+ +  R        +++      ++
Sbjct: 23  EVWDRLVGNFWLPEKVPVSNDIPSW---GTLTAQEKQLTMRVFTGLTLLDTIQGTVGAVS 79

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANW 161
           +      P         AF E+VH+ ++  I ++L    D  + F    E P++  KA  
Sbjct: 80  LIPDAITPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTRDIDDAFRWSEENPNLQRKAEI 139

Query: 162 ALQYTQ 167
            + Y Q
Sbjct: 140 VMDYYQ 145


>gi|261820460|ref|YP_003258566.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
           wasabiae WPP163]
 gi|261604473|gb|ACX86959.1| Ribonucleoside-diphosphate reductase [Pectobacterium wasabiae
           WPP163]
          Length = 320

 Score = 77.2 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 57/139 (41%), Gaps = 7/139 (5%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +D+  W     L   ER +  R        
Sbjct: 11  NWNKIEDDKDLEVWNRLTSNFWLPEKVPLSNDIPSW---GTLNPRERQLTIRVFTGLTLL 67

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY--- 149
           +++        +      P     L   +F EAVH+ ++  I ++L L   E+ + Y   
Sbjct: 68  DTIQNTLGAPTLMPDAVTPHEEAVLSNISFMEAVHARSYSSIFSTLCL-TSEVDDAYRWS 126

Query: 150 REVPSITAKANWALQYTQT 168
            E P++  K++  L + ++
Sbjct: 127 EENPALQKKSDIILSHYRS 145


>gi|297570727|ref|YP_003696501.1| ribonucleoside-diphosphate reductase [Arcanobacterium haemolyticum
           DSM 20595]
 gi|296931074|gb|ADH91882.1| Ribonucleoside-diphosphate reductase [Arcanobacterium haemolyticum
           DSM 20595]
          Length = 324

 Score = 77.2 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 6/163 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +     N W+P ++P+ +D+  W   N L   E+LM  R        
Sbjct: 15  NWNKIIDEKDQEVWDRLTGNFWLPEKIPLSNDIQSW---NTLKPHEQLMTTRVFTGLTLL 71

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYR 150
           +++      +++      P     L   AF E+VH+ ++  I ++L   +   E F    
Sbjct: 72  DTVQGTVGAISLIPDAITPHEEAVLTNIAFMESVHAKSYSSIFSTLISSQEIEETFRWSE 131

Query: 151 EVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           E P +  KA   L Y +    P             L  S  + 
Sbjct: 132 ENPYLQKKAQIVLDYYRG-DDPEKRKVASTMLESFLFYSGFYA 173


>gi|319645694|ref|ZP_07999925.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus sp.
           BT1B_CT2]
 gi|317392241|gb|EFV73037.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus sp.
           BT1B_CT2]
          Length = 330

 Score = 77.2 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 52/152 (34%), Gaps = 6/152 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            Y       W+P E+ +  DL  WK    L D E+    + L      ++   N  +  I
Sbjct: 24  FYEQNVKQFWLPEEISLNGDLLTWKH---LGDKEKDTYMKVLAGLTLLDTEQGNTGMPTI 80

Query: 105 YRHLSNPECRQYLLRQAFEEA-VHSHTFQYIITSLGLDEG--ELFNMYREVPSITAKANW 161
             H+   + +  L   A  E  VH+ ++  I  +L   E   ELF   +    +  KA  
Sbjct: 81  AEHVEGHQRKAVLNFMAMMENAVHAKSYSNIFMTLAPTEKITELFEWVKTNRYLQRKAAI 140

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
                  + +       K   + +   S  F 
Sbjct: 141 IGGLYNAIEAGDDISLYKAMVASVYLESFLFY 172


>gi|123441277|ref|YP_001005264.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122088238|emb|CAL11027.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 323

 Score = 77.2 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 55/138 (39%), Gaps = 5/138 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +     N W+P +VP+ +D+  W     LT DE+ +  R        
Sbjct: 14  NWNKIEDDKDLEVWNRLTANFWLPEKVPLSNDIPSWAK---LTADEQQLTIRVFTGLTLL 70

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYR 150
           +++       A+ +    P         +F EAVH+ ++  I ++L +  D  E +    
Sbjct: 71  DTIQNTLGAPALIKDAITPHEEAVFSNISFMEAVHARSYSSIFSTLCMTSDVDEAYRWSE 130

Query: 151 EVPSITAKANWALQYTQT 168
           E   +  KA+  LQ+   
Sbjct: 131 ENGPLQKKADIILQHYNN 148


>gi|332162772|ref|YP_004299349.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|325667002|gb|ADZ43646.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
          Length = 323

 Score = 77.2 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 55/138 (39%), Gaps = 5/138 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +     N W+P +VP+ +D+  W     LT DE+ +  R        
Sbjct: 14  NWNKIEDDKDLEVWNRLTANFWLPEKVPLSNDIPSWAK---LTADEQQLTIRVFTGLTLL 70

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYR 150
           +++       A+ +    P         +F EAVH+ ++  I ++L +  D  E +    
Sbjct: 71  DTIQNTLGAPALIKDAITPHEEAVFSNISFMEAVHARSYSSIFSTLCMTSDVDEAYRWSE 130

Query: 151 EVPSITAKANWALQYTQT 168
           E   +  KA+  LQ+   
Sbjct: 131 ENGPLQKKADIILQHYNN 148


>gi|318606878|emb|CBY28376.1| ribonucleotide reductase of class Ib (aerobic),beta subunit
           [Yersinia enterocolitica subsp. palearctica Y11]
          Length = 323

 Score = 77.2 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 55/138 (39%), Gaps = 5/138 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +     N W+P +VP+ +D+  W     LT DE+ +  R        
Sbjct: 14  NWNKIEDDKDLEVWNRLTANFWLPEKVPLSNDIPSWAK---LTADEQQLTIRVFTGLTLL 70

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYR 150
           +++       A+ +    P         +F EAVH+ ++  I ++L +  D  E +    
Sbjct: 71  DTIQNTLGAPALIKDAITPHEEAVFSNISFMEAVHARSYSSIFSTLCMTSDVDEAYRWSE 130

Query: 151 EVPSITAKANWALQYTQT 168
           E   +  KA+  LQ+   
Sbjct: 131 ENGPLQKKADIILQHYNN 148


>gi|221316490|ref|ZP_03598295.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. subtilis str. NCIB 3610]
          Length = 347

 Score = 77.2 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 67/177 (37%), Gaps = 8/177 (4%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           +RM +  S +     +     +E         W+P EV M  D   W +   + + E+ +
Sbjct: 20  ERMFDDVSGILFWDDIINQVYYELIKEMREVFWIPDEVSMSKDKVQWAT--EMNEMEQEL 77

Query: 82  IKRNLGFFASSESLVANNIVLAIYR-HLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
               +G  A  +S+        +   ++ +   +  +   A  E +H+ ++ YI++S+  
Sbjct: 78  FLNAIGILAVLDSIAT--YFDNVAAYYIRDSAIKALMAFVAAMETIHNESYTYILSSVSS 135

Query: 141 DEGEL--FNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
               L  F   ++   +  +    +  + + + +P+   + K   +      L F+ 
Sbjct: 136 KAVSLDVFERPKKNEFMIRRNKLMMDLFDEFIQNPTPETFAKGLVAMSGLEGLCFVN 192


>gi|326772780|ref|ZP_08232064.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces
           viscosus C505]
 gi|326637412|gb|EGE38314.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces
           viscosus C505]
          Length = 325

 Score = 77.2 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 57/152 (37%), Gaps = 6/152 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W +   L + E+ M  R        +++      ++
Sbjct: 27  EVWDRLTGNFWLPEKVPLSNDVQSWAT---LNEAEKNMTTRVFTGLTLLDTIQGTVGAVS 83

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELFNMYREVPSITAKANW 161
           +      P     L   AF E+VH+ ++  I ++L    +  E F    E  ++  KA  
Sbjct: 84  LIPDARTPHEEAVLTNIAFMESVHARSYSSIFSTLISTAEIDEAFRWSEENANLQRKARI 143

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            L Y +    P             L  S  + 
Sbjct: 144 ILDYYRG-DDPEKRKVASTMLESFLFYSGFYA 174


>gi|325066257|ref|ZP_08124930.1| Ribonucleoside-diphosphate reductase [Actinomyces oris K20]
          Length = 324

 Score = 77.2 bits (189), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 57/152 (37%), Gaps = 6/152 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W +   L + E+ M  R        +++      ++
Sbjct: 26  EVWDRLTGNFWLPEKVPLSNDVQSWAT---LNEAEKNMTTRVFTGLTLLDTIQGTVGAVS 82

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELFNMYREVPSITAKANW 161
           +      P     L   AF E+VH+ ++  I ++L    +  E F    E  ++  KA  
Sbjct: 83  LIPDARTPHEEAVLTNIAFMESVHARSYSSIFSTLISTAEIDEAFRWSEENANLQRKARI 142

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            L Y +    P             L  S  + 
Sbjct: 143 ILDYYRG-DDPEKRKVASTMLESFLFYSGFYA 173


>gi|323650974|ref|YP_004243617.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. natto]
 gi|323461614|dbj|BAJ77030.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. natto]
          Length = 347

 Score = 76.8 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 67/177 (37%), Gaps = 8/177 (4%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           +RM +  S +     +     +E         W+P EV M  D   W +   + + E+ +
Sbjct: 20  ERMFDDVSGILFWDDIINQVYYELIKEMREVFWIPDEVSMSKDKVQWAT--EMNEMEQEL 77

Query: 82  IKRNLGFFASSESLVANNIVLAIYR-HLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
               +G  A  +S+        +   ++ +   +  +   A  E +H+ ++ YI++S+  
Sbjct: 78  FLNAIGILAVLDSIAT--YFDNVAAYYIRDSAIKALMAFVAAMETIHNESYTYILSSVSS 135

Query: 141 DEGEL--FNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
               L  F   ++   +  +    +  + + + +P+   + K   +      L F+ 
Sbjct: 136 KAVSLDVFERPKKNEFMIRRNKLMMDLFDEFIQNPTPETFAKGLVAMSGLEGLCFVN 192


>gi|203454817|ref|YP_002225133.1| gp256 [Mycobacterium phage Myrna]
 gi|197311865|gb|ACH62223.1| gp256 [Mycobacterium phage Myrna]
          Length = 322

 Score = 76.8 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 53/126 (42%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +    NN W+P ++P+ +D+  W     LT++ERL+  R        +++      ++
Sbjct: 24  EVWNRLTNNFWLPEKIPVSNDVQSWHQ---LTEEERLITMRVFTGLTMLDTIQGTVGAVS 80

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANW 161
           +      P         AF E+VH+ ++  I ++L    +    F    E  ++  KA  
Sbjct: 81  LIPDAITPHEEAVYTNIAFMESVHARSYSNIFSTLCSTKEIDAAFRWSEENANLQKKAEI 140

Query: 162 ALQYTQ 167
            L Y  
Sbjct: 141 VLSYYN 146


>gi|226305840|ref|YP_002765800.1| ribonucleoside-diphosphate reductase beta chain [Rhodococcus
           erythropolis PR4]
 gi|229493405|ref|ZP_04387194.1| ribonucleoside-diphosphate reductase, beta subunit [Rhodococcus
           erythropolis SK121]
 gi|226184957|dbj|BAH33061.1| ribonucleoside-diphosphate reductase beta chain [Rhodococcus
           erythropolis PR4]
 gi|229319721|gb|EEN85553.1| ribonucleoside-diphosphate reductase, beta subunit [Rhodococcus
           erythropolis SK121]
          Length = 321

 Score = 76.8 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 52/126 (41%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +    +N W+P +VP+ +D+  W     LT  E+ +  R        +++      ++
Sbjct: 23  EVWDRLVSNFWLPEKVPVSNDIPSW---GTLTAQEQQLTMRVFTGLTLLDTIQGTVGAVS 79

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANW 161
           +      P         AF E+VH+ ++  I ++L    D  + F    E P++  KA  
Sbjct: 80  LIPDAITPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTPDIDDAFRWSEENPNLQRKAQI 139

Query: 162 ALQYTQ 167
            L Y  
Sbjct: 140 VLDYYN 145


>gi|184201049|ref|YP_001855256.1| ribonucleoside-diphosphate reductase beta subunit [Kocuria
           rhizophila DC2201]
 gi|183581279|dbj|BAG29750.1| ribonucleoside-diphosphate reductase beta subunit [Kocuria
           rhizophila DC2201]
          Length = 326

 Score = 76.4 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 63/153 (41%), Gaps = 5/153 (3%)

Query: 17  VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           +  +   +L   ++      ++     E +    +N W+P +VP+ +D+  WK+   LT 
Sbjct: 1   MTTEQVELLRHPAEAINWNRVQDEKDTEVWDRLTSNFWLPEKVPLSNDVQSWKT---LTA 57

Query: 77  DERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
           +E+ +  +        +++      +++                AF E+VH+ ++  I +
Sbjct: 58  EEQDLTMKVFTGLTLLDTIQGTVGAVSLIPDAKTLHEEAVYTNIAFMESVHAKSYSSIFS 117

Query: 137 SLG--LDEGELFNMYREVPSITAKANWALQYTQ 167
           +L       E F   +E   +  KA+  L+Y +
Sbjct: 118 TLSSMKQIDEAFRWSKENEHLQRKADIVLRYYK 150


>gi|311068263|ref|YP_003973186.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           atrophaeus 1942]
 gi|310868780|gb|ADP32255.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           atrophaeus 1942]
          Length = 328

 Score = 76.4 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 55/152 (36%), Gaps = 6/152 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            Y       W+P E+ +  DL  WK    L  +E+    + L      ++   N  +  +
Sbjct: 21  FYNQNVKQFWLPEEIALNGDLLTWK---YLGKNEQDTYMKVLAGLTLLDTEQGNTGMPIV 77

Query: 105 YRHLSNPECRQYLLRQAFEEA-VHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
             H+   + +  L   A  E  VH+ ++  I  +L   E   E+F   ++   +  KA  
Sbjct: 78  ADHVEGHQRKAVLNFMAMMENAVHAKSYSNIFMTLAPTETINEVFEWVKQNKFLQKKAQI 137

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            +   Q++         K   + +   S  F 
Sbjct: 138 IVGLYQSIKKDDEISLFKAMVASVYLESFLFY 169


>gi|295097265|emb|CBK86355.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 319

 Score = 76.4 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 57/140 (40%), Gaps = 5/140 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKIQDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSHAEQQLTIRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++       A+      P     +   +F EAVH+ ++  + ++L    D    +    
Sbjct: 67  DTIQNTVGAPALMSDALTPHEEAVMSNISFMEAVHARSYSSVFSTLCQTRDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQTLS 170
           E  S+  KA+  L+Y +   
Sbjct: 127 ESASLQRKADLVLEYYRADE 146


>gi|169630485|ref|YP_001704134.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           abscessus ATCC 19977]
 gi|169242452|emb|CAM63480.1| Probable ribonucleoside-diphosphate reductase beta subunit
           [Mycobacterium abscessus]
          Length = 324

 Score = 76.4 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W   N LTD E+ +  R        +++      ++
Sbjct: 26  EVWDRLTGNFWLPEKVPVSNDIQSW---NTLTDHEKQLTMRVFTGLTLLDTIQGTVGAVS 82

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +      P         AF E+VH+ ++  I ++L       + F    E P++  KA  
Sbjct: 83  LIPDAITPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTREIDDAFRWSEENPNLQRKAEI 142

Query: 162 ALQYTQ 167
            ++Y +
Sbjct: 143 VMEYYR 148


>gi|227876446|ref|ZP_03994558.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           mulieris ATCC 35243]
 gi|269976014|ref|ZP_06183018.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus
           mulieris 28-1]
 gi|306817405|ref|ZP_07451150.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           mulieris ATCC 35239]
 gi|307700420|ref|ZP_07637459.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus
           mulieris FB024-16]
 gi|227842987|gb|EEJ53184.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           mulieris ATCC 35243]
 gi|269935842|gb|EEZ92372.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus
           mulieris 28-1]
 gi|304649846|gb|EFM47126.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           mulieris ATCC 35239]
 gi|307614405|gb|EFN93635.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus
           mulieris FB024-16]
          Length = 322

 Score = 76.0 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 54/137 (39%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +     N W+P ++P+ +D+  WK+   L  DE+LM  R        
Sbjct: 13  NWNDIEDEKDLEVWDRLTGNFWLPEKIPLSNDIPSWKT---LNADEKLMTNRVFTGLTLL 69

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYR 150
           +++      +++      P         AF E+VH+ ++  I ++L   E   E F    
Sbjct: 70  DTIQGTVGAVSLIPDSRTPHEEAVYTNIAFMESVHAKSYSSIFSTLLSTEEINESFQWSE 129

Query: 151 EVPSITAKANWALQYTQ 167
               +  KA+  L Y  
Sbjct: 130 NNEFLQKKAHIVLDYYH 146


>gi|296104353|ref|YP_003614499.1| ribonucleotide-diphosphate reductase subunit beta [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295058812|gb|ADF63550.1| ribonucleotide-diphosphate reductase subunit beta [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 319

 Score = 76.0 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 5/140 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNHIQDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSHAEQQLTIRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++       A+      P     +   +F EAVH+ ++  I ++L    D    ++   
Sbjct: 67  DTIQNTVGAPALMADALTPHEEAVMSNISFMEAVHARSYSSIFSTLCQTKDVDAAYSWSE 126

Query: 151 EVPSITAKANWALQYTQTLS 170
           E  S+  KAN  L Y Q   
Sbjct: 127 ESESLQRKANLVLDYYQADE 146


>gi|308177564|ref|YP_003916970.1| ribonucleoside-diphosphate reductase subunit beta [Arthrobacter
           arilaitensis Re117]
 gi|307745027|emb|CBT75999.1| ribonucleoside-diphosphate reductase beta chain [Arthrobacter
           arilaitensis Re117]
          Length = 324

 Score = 76.0 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 61/151 (40%), Gaps = 5/151 (3%)

Query: 19  VDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE 78
           + +K  L  + +      ++     E +    NN W+P +VP+ +D+  W     LT+DE
Sbjct: 1   MTEKIQLTNKVEAINWNRIQDDKDVEVWNRLVNNFWLPEKVPLSNDIQSW---GTLTEDE 57

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           +L+  R        ++L      +++      P         AF E+VH+ ++  I ++L
Sbjct: 58  KLLTMRVFTGLTLLDTLQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTL 117

Query: 139 --GLDEGELFNMYREVPSITAKANWALQYTQ 167
               +  E F    E  ++  KA     Y  
Sbjct: 118 ASTKEIDEAFRWSTENVNLQKKAQIIESYYH 148


>gi|325675841|ref|ZP_08155525.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus equi
           ATCC 33707]
 gi|325553812|gb|EGD23490.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus equi
           ATCC 33707]
          Length = 335

 Score = 76.0 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W +   LT +E+ +  R        +++      ++
Sbjct: 37  EVWDRLTGNFWLPEKVPVSNDIQSWAT---LTPNEQQLTMRVFTGLTLLDTIQGTVGAVS 93

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +      P     L   AF E+VH+ ++  I ++L       + F    E P++  KA  
Sbjct: 94  LIPDAVTPHEEAVLTNIAFMESVHAKSYSQIFSTLCTTREIDDAFRWSEENPNLQRKAQI 153

Query: 162 ALQYTQ 167
            L Y +
Sbjct: 154 VLDYYK 159


>gi|261343568|ref|ZP_05971213.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rustigianii DSM 4541]
 gi|282568717|gb|EFB74252.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rustigianii DSM 4541]
          Length = 323

 Score = 76.0 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 52/136 (38%), Gaps = 5/136 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +     N W+P +VP+ +D+  W   N LT  E+ +  R        
Sbjct: 14  NWNRIQDDKDLEVWNRLTTNFWLPEKVPLSNDINSW---NTLTATEKKLTIRVFTGLTLL 70

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++        +      P     L   +F EAVH+ ++  I ++L    D  E +    
Sbjct: 71  DTIQNTVGAPCLMADAQTPHEEAVLSNISFMEAVHARSYSSIFSTLCSTPDVDEAYRWSE 130

Query: 151 EVPSITAKANWALQYT 166
           E  ++  KA   L Y 
Sbjct: 131 ENSALQNKAKIILSYY 146


>gi|283457964|ref|YP_003362570.1| ribonucleotide reductase subunit beta [Rothia mucilaginosa DY-18]
 gi|283133985|dbj|BAI64750.1| ribonucleotide reductase, beta subunit [Rothia mucilaginosa DY-18]
          Length = 325

 Score = 76.0 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 60/149 (40%), Gaps = 5/149 (3%)

Query: 20  DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER 79
           +  ++++   +      ++     E +     N W+P +VP+ +D+  WK+   LT++E+
Sbjct: 3   EKVKLVDHAVEAINWNRIEDEKDLEVWDRLTGNFWLPEKVPLSNDVPSWKT---LTEEEK 59

Query: 80  LMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL- 138
            +  R        +++      +++                AF E+VH+ ++  I ++L 
Sbjct: 60  QLTMRVFTGLTLLDTIQGTVGAVSLLPDAVTAHEEAVYTNIAFMESVHAKSYSSIFSTLA 119

Query: 139 -GLDEGELFNMYREVPSITAKANWALQYT 166
              +  E F    E   +  KA   L Y 
Sbjct: 120 STKEIDEAFRWASENEHLQKKAKIVLSYY 148


>gi|258544274|ref|ZP_05704508.1| ribonucleoside-diphosphate reductase, beta subunit [Cardiobacterium
           hominis ATCC 15826]
 gi|258520512|gb|EEV89371.1| ribonucleoside-diphosphate reductase, beta subunit [Cardiobacterium
           hominis ATCC 15826]
          Length = 325

 Score = 76.0 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 57/140 (40%), Gaps = 5/140 (3%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
               Q+ P +Y    E   +  +++W+ TE     D+  +K+   +T  ER  + R +  
Sbjct: 7   ERRIQIKPYEYPELLEFKDAIRHSYWLHTEFNFTGDIQDYKT--VITPRERTALTRAMLA 64

Query: 89  FASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNM 148
            +  E  V       +YR+   PE        A  E  H   + +++  LG+   E+F+ 
Sbjct: 65  ISQVEVSVKRFWGD-LYRYFPKPEIDDVGGTFAESEIRHKDAYSFLLEKLGM--NEMFSQ 121

Query: 149 YREVPSITAKANWALQYTQT 168
             E P++  +  +   + + 
Sbjct: 122 ITEYPALMRRIEYMEDFMRD 141


>gi|312140539|ref|YP_004007875.1| ribonucleoside-diphosphate reductase nrdf [Rhodococcus equi 103S]
 gi|311889878|emb|CBH49195.1| ribonucleoside-diphosphate reductase NrdF [Rhodococcus equi 103S]
          Length = 329

 Score = 76.0 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W +   LT +E+ +  R        +++      ++
Sbjct: 31  EVWDRLTGNFWLPEKVPVSNDIQSWAT---LTPNEQQLTMRVFTGLTLLDTIQGTVGAVS 87

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +      P     L   AF E+VH+ ++  I ++L       + F    E P++  KA  
Sbjct: 88  LIPDAVTPHEEAVLTNIAFMESVHAKSYSQIFSTLCTTREIDDAFRWSEENPNLQRKAQI 147

Query: 162 ALQYTQ 167
            L Y +
Sbjct: 148 VLDYYK 153


>gi|253689503|ref|YP_003018693.1| Ribonucleoside-diphosphate reductase [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251756081|gb|ACT14157.1| Ribonucleoside-diphosphate reductase [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 320

 Score = 76.0 bits (186), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 58/139 (41%), Gaps = 7/139 (5%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +D+  W   + L   ER +  R        
Sbjct: 11  NWNKIEDDKDLEVWNRLTSNFWLPEKVPLSNDIPSW---STLNARERQLTIRVFTGLTLL 67

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY--- 149
           +++        +      P     L   +F EAVH+ ++  I ++L L   E+ + Y   
Sbjct: 68  DTIQNTLGAPTLMPDAVTPHEEAVLSNISFMEAVHARSYSSIFSTLCL-TSEVDDAYRWS 126

Query: 150 REVPSITAKANWALQYTQT 168
            E P++  K++  L + ++
Sbjct: 127 EENPALQKKSDIILSHYRS 145


>gi|268590425|ref|ZP_06124646.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rettgeri DSM 1131]
 gi|291314339|gb|EFE54792.1| ribonucleoside-diphosphate reductase, beta subunit [Providencia
           rettgeri DSM 1131]
          Length = 323

 Score = 75.7 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 54/136 (39%), Gaps = 5/136 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +D+  W   N LT  E+ +  R        
Sbjct: 14  NWNRIQDDKDLEVWNRLTSNFWLPEKVPLSNDIPSW---NTLTAAEKQLTIRVFTGLTLL 70

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++        +      P     L   +F EAVH+ ++  I ++L   +D  + +    
Sbjct: 71  DTIQNTVGAPCLMPDAQTPHEEAVLSNISFMEAVHARSYSSIFSTLCSTVDVDDAYRWSE 130

Query: 151 EVPSITAKANWALQYT 166
           E  ++  KA   L Y 
Sbjct: 131 ENNALQNKAKIILSYY 146


>gi|238784826|ref|ZP_04628827.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           bercovieri ATCC 43970]
 gi|238714242|gb|EEQ06253.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           bercovieri ATCC 43970]
          Length = 323

 Score = 75.7 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 56/138 (40%), Gaps = 5/138 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +     N W+P +VP+ +D+  W +   LT +E+ +  R        
Sbjct: 14  NWNKIEDDKDLEVWNRLTANFWLPEKVPLSNDIPSWAT---LTPNEQQLTIRVFTGLTLL 70

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYR 150
           +++       A+ +    P         +F EAVH+ ++  I ++L +  D  + +    
Sbjct: 71  DTIQNTLGAPALIKDAMTPHEEAVFSNISFMEAVHARSYSSIFSTLCMTSDVDDAYRWSE 130

Query: 151 EVPSITAKANWALQYTQT 168
           E   +  KA+  LQ+   
Sbjct: 131 ENGPLQKKADIILQHYHN 148


>gi|108798796|ref|YP_638993.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           sp. MCS]
 gi|119867913|ref|YP_937865.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           sp. KMS]
 gi|126434397|ref|YP_001070088.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           sp. JLS]
 gi|108769215|gb|ABG07937.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Mycobacterium sp. MCS]
 gi|119694002|gb|ABL91075.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Mycobacterium sp. KMS]
 gi|126234197|gb|ABN97597.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Mycobacterium sp. JLS]
          Length = 320

 Score = 75.7 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 55/127 (43%), Gaps = 7/127 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W   N LT  E+ +  R        +++      ++
Sbjct: 22  EVWDRLTGNFWLPEKVPVSNDIPSW---NTLTAHEKQLTMRVFTGLTLLDTIQGTVGAVS 78

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY---REVPSITAKAN 160
           +      P         AF E+VH+ ++  I ++L     E+ + +    E P++  KA 
Sbjct: 79  LIPDALTPHEEAVYTNIAFMESVHARSYSNIFSTLCS-TAEIDDAFRWSEENPNLQRKAE 137

Query: 161 WALQYTQ 167
             +QY +
Sbjct: 138 IVMQYYK 144


>gi|119387083|ref|YP_918138.1| ribonucleotide-diphosphate reductase subunit beta [Paracoccus
           denitrificans PD1222]
 gi|119377678|gb|ABL72442.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Paracoccus denitrificans PD1222]
          Length = 329

 Score = 75.7 bits (185), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 53/131 (40%), Gaps = 5/131 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W +   L  +ER +  R        +++       A
Sbjct: 31  EVWNRLTVNFWLPEKVPLSNDVQSWAT---LRPEERELTIRVFTGLTLLDTIQNTVGAPA 87

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +      P     L   AF EAVH+ ++  I ++L L       F    E P +  KA  
Sbjct: 88  MMPDALTPHEEAVLSNIAFMEAVHARSYSSIFSTLCLTPEVDAAFRWAEENPHLQQKARL 147

Query: 162 ALQYTQTLSSP 172
            L+  +  S P
Sbjct: 148 VLEEYKAGSDP 158


>gi|311992967|ref|YP_004009834.1| NrdB aerobic NDP reductase small subunit [Acinetobacter phage
           Acj61]
 gi|295815256|gb|ADG36182.1| NrdB aerobic NDP reductase small subunit [Acinetobacter phage
           Acj61]
          Length = 377

 Score = 75.3 bits (184), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 59/163 (36%), Gaps = 9/163 (5%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           K+       + A +  W P E+ +  D + +K    L   ++     NL + A  +++  
Sbjct: 32  KHPTIENLTVQALSFFWRPEEINLTTDSSQFKK---LHPRDQRTFTLNLLYQAIMDTVQG 88

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
           +     +    S+     ++    F E +HS ++ +II +L  +  E+F+       I A
Sbjct: 89  SAPSEILGPICSDIGLDTWIQTWTFFETIHSRSYTHIIRNLYNNPTEIFDSVVLDDQIMA 148

Query: 158 KANWALQYTQTLS------SPSFHYWNKRRRSRILTRSLRFLC 194
           +A    +Y   L       S                +   +LC
Sbjct: 149 RAASICKYYDELEIKWTLYSADKIRGIATEEQLYELKKAFYLC 191


>gi|118469232|ref|YP_886661.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           smegmatis str. MC2 155]
 gi|118469934|ref|YP_885432.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           smegmatis str. MC2 155]
 gi|118170519|gb|ABK71415.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
           smegmatis str. MC2 155]
 gi|118171221|gb|ABK72117.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
           smegmatis str. MC2 155]
          Length = 324

 Score = 75.3 bits (184), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 7/127 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W +   LTD+E+ +  R        +++      ++
Sbjct: 26  EVWHRLTGNFWLPEKVPVSNDIQSWHT---LTDNEKQLTMRVFTGLTLLDTIQGTVGAVS 82

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY---REVPSITAKAN 160
           +      P     L   AF E+VH+ ++  I ++L     E+ + +    E P++  KA 
Sbjct: 83  LIPDAVTPHEEAVLTNIAFMESVHAKSYSNIFSTLCS-TAEIDDAFRWSEENPNLQRKAA 141

Query: 161 WALQYTQ 167
             +QY +
Sbjct: 142 IVMQYYR 148


>gi|315445193|ref|YP_004078072.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Mycobacterium sp. Spyr1]
 gi|315263496|gb|ADU00238.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Mycobacterium sp. Spyr1]
          Length = 320

 Score = 75.3 bits (184), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 55/127 (43%), Gaps = 7/127 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W   N LT  E+ +  R        +++      ++
Sbjct: 22  EVWDRLTGNFWLPEKVPVSNDIPSW---NTLTAHEKQLTMRVFTGLTLLDTIQGTVGAVS 78

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY---REVPSITAKAN 160
           +      P         AF E+VH+ ++  I ++L     E+ + +    E P++  KA 
Sbjct: 79  LIPDALTPHEEAVYTNIAFMESVHARSYSNIFSTLCS-TSEIDDAFRWSEENPNLQRKAE 137

Query: 161 WALQYTQ 167
             +QY +
Sbjct: 138 IVMQYYK 144


>gi|50122260|ref|YP_051427.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
           atrosepticum SCRI1043]
 gi|49612786|emb|CAG76236.1| ribonucleoside-diphosphate reductase 2 beta chain [Pectobacterium
           atrosepticum SCRI1043]
          Length = 320

 Score = 75.3 bits (184), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 58/139 (41%), Gaps = 7/139 (5%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +D+  W   + L   ER +  R        
Sbjct: 11  NWNKIEDDKDLEVWNRLTSNFWLPEKVPLSNDIPSW---STLNTRERQLTIRVFTGLTLL 67

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY--- 149
           +++        +      P     L   +F EAVH+ ++  I ++L L   E+ + Y   
Sbjct: 68  DTIQNTLGAPTLMPDAVTPHEEAVLSNISFMEAVHARSYSSIFSTLCL-TSEVDDAYRWS 126

Query: 150 REVPSITAKANWALQYTQT 168
            E P++  K++  L + ++
Sbjct: 127 EENPALQKKSDIILSHYRS 145


>gi|326381484|ref|ZP_08203178.1| Ribonucleoside-diphosphate reductase [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326199731|gb|EGD56911.1| Ribonucleoside-diphosphate reductase [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 333

 Score = 75.3 bits (184), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 51/126 (40%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W     LTD E+ +  R        +++      ++
Sbjct: 35  EVWDRLTGNFWLPEKVPVSNDIPSW---GTLTDYEKTLTMRVFTGLTLLDTIQGTVGAIS 91

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANW 161
           +      P         AF E+VH+ ++  I ++L    +  E F    E   +  KA  
Sbjct: 92  LIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTKEIDEAFRWSEENEYLQRKAQI 151

Query: 162 ALQYTQ 167
            + Y +
Sbjct: 152 VMDYYR 157


>gi|327197767|ref|YP_004301465.1| gp132 [Brochothrix phage A9]
 gi|299810367|gb|ADJ53166.1| gp132 [Brochothrix phage A9]
          Length = 203

 Score = 75.3 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 63/159 (39%), Gaps = 6/159 (3%)

Query: 17  VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           +N  ++R             ++  +  + +    +  W  T VP+ +DL  W++   L  
Sbjct: 1   MNETERRAKAGVYKAINWNEIEDNYDKQTWEKLNSQFWTATRVPVSNDLDDWRT---LDP 57

Query: 77  DERLMIKRNLGFFASSESLVANN-IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
             + +  +  G     ++L + + ++  +     +P  R  L    F EA+H+ ++  I 
Sbjct: 58  VAKDLYGKVFGGLTLLDTLQSQDGMLSLLNNETQSPHMRAVLSNMLFMEAIHAQSYSTIF 117

Query: 136 TSLGLDEG--ELFNMYREVPSITAKANWALQYTQTLSSP 172
           ++L   +    +F+       +  KA+   +  Q  + P
Sbjct: 118 STLMTPQEIANVFDFTHTNEHLQKKAHLINEVYQNGTVP 156


>gi|255327220|ref|ZP_05368295.1| ribonucleoside-diphosphate reductase, beta subunit [Rothia
           mucilaginosa ATCC 25296]
 gi|255295838|gb|EET75180.1| ribonucleoside-diphosphate reductase, beta subunit [Rothia
           mucilaginosa ATCC 25296]
          Length = 325

 Score = 75.3 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 5/136 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +     N W+P +VP+ +D+  WK+   LT++E+ +  R        
Sbjct: 16  NWNRIEDEKDLEVWDRLTGNFWLPEKVPLSNDVPSWKT---LTEEEKQLTMRVFTGLTLL 72

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++      +++                AF E+VH+ ++  I ++L    +  E F    
Sbjct: 73  DTIQGTVGAVSLLPDAVTAHEEAVYTNIAFMESVHAKSYSSIFSTLASTKEIDEAFRWAA 132

Query: 151 EVPSITAKANWALQYT 166
           E   +  KA   L Y 
Sbjct: 133 ENEHLQKKAKIVLSYY 148


>gi|145224865|ref|YP_001135543.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           gilvum PYR-GCK]
 gi|145217351|gb|ABP46755.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Mycobacterium gilvum PYR-GCK]
          Length = 320

 Score = 75.3 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 55/127 (43%), Gaps = 7/127 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W   N LT  E+ +  R        +++      ++
Sbjct: 22  EVWDRLTGNFWLPEKVPVSNDIPSW---NTLTAHEKQLTMRVFTGLTLLDTIQGTVGAVS 78

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY---REVPSITAKAN 160
           +      P         AF E+VH+ ++  I ++L     E+ + +    E P++  KA 
Sbjct: 79  LIPDALTPHEEAVYTNIAFMESVHARSYSNIFSTLCS-TSEIDDAFRWSEENPNLQRKAE 137

Query: 161 WALQYTQ 167
             +QY +
Sbjct: 138 IVMQYYK 144


>gi|238796650|ref|ZP_04640156.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           mollaretii ATCC 43969]
 gi|238719381|gb|EEQ11191.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           mollaretii ATCC 43969]
          Length = 323

 Score = 75.3 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 56/138 (40%), Gaps = 5/138 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +     N W+P +VP+ +D+  W +   LT +E+ +  R        
Sbjct: 14  NWNKIEDDKDLEVWNRLTANFWLPEKVPLSNDIPSWAT---LTPNEQQLTIRVFTGLTLL 70

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYR 150
           +++       A+ +    P         +F EAVH+ ++  I ++L +  D  + +    
Sbjct: 71  DTIQNTLGAPALIKDAITPHEEAVFSNISFMEAVHARSYSSIFSTLCMTSDVDDAYRWSE 130

Query: 151 EVPSITAKANWALQYTQT 168
           E   +  KA+  LQ+   
Sbjct: 131 ENGPLQKKADIILQHYHN 148


>gi|325677552|ref|ZP_08157215.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus equi
           ATCC 33707]
 gi|325551623|gb|EGD21322.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus equi
           ATCC 33707]
          Length = 322

 Score = 75.3 bits (184), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 7/127 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN-NIVL 102
           E +     N W+P ++P+ +DLA W +   LTD ER M  R        ++  A    V 
Sbjct: 24  EVWDRLTGNFWLPEKIPLSNDLASWAT---LTDTEREMTIRVFTGLTLLDTAQATVGAVA 80

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
            I   ++ P     L   AF E+VH+ ++  I ++L         F      P +  KA 
Sbjct: 81  MIADAVT-PHEEAVLTNMAFMESVHAKSYSSIFSTLCSTRQIDAAFEWSERNPHLQRKAQ 139

Query: 161 WALQYTQ 167
             + Y +
Sbjct: 140 IVVDYYR 146


>gi|313206313|ref|YP_004045490.1| ribonucleotide reductase [Riemerella anatipestifer DSM 15868]
 gi|312445629|gb|ADQ81984.1| ribonucleotide reductase [Riemerella anatipestifer DSM 15868]
 gi|315023179|gb|EFT36190.1| ribonucleotide reductase [Riemerella anatipestifer RA-YM]
 gi|325336242|gb|ADZ12516.1| ribonucleoside-diphosphate reductase beta chain [Riemerella
           anatipestifer RA-GD]
          Length = 324

 Score = 74.9 bits (183), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 53/143 (37%), Gaps = 5/143 (3%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
                P +Y    +   +   + W+ +EV    D+  + S   L   E+  +K  L   A
Sbjct: 7   RINYKPFEYPEVMQYIEAINKSFWVHSEVDFTADIQDFHS--QLEPHEKNAVKNALLAIA 64

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
             E  V       +Y HL  PE        A  E  HS  +  ++  LG +  E  N+  
Sbjct: 65  QIEVSVKTFWG-NLYNHLPKPEFNGLGATFAECEFRHSEAYSRLLEVLGYN-NEFLNVIE 122

Query: 151 EVPSITAKANWALQYTQTLSSPS 173
             P+I  + ++     +  +S +
Sbjct: 123 N-PAIRKRIDFLTDVLRNSNSST 144


>gi|154686152|ref|YP_001421313.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           amyloliquefaciens FZB42]
 gi|154352003|gb|ABS74082.1| NrdF [Bacillus amyloliquefaciens FZB42]
          Length = 329

 Score = 74.9 bits (183), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 54/152 (35%), Gaps = 6/152 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            Y       W+P E+ +  DL  WK    L  +E+    + L      ++   N  +  +
Sbjct: 21  FYNQNVKQFWLPEEIALNGDLLTWK---YLGKNEQDTYMKVLAGLTLLDTEQGNTGMPIV 77

Query: 105 YRHLSNPECRQYLLRQAFEEA-VHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
             H+   + +  L   A  E  VH+ ++  I  +L   E   E+F   ++   +  KA  
Sbjct: 78  AEHVEGHQRKAVLNFMAMMENAVHAKSYSNIFMTLAPTETINEVFEWVKQNKYLQKKAQM 137

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            +   + +         K   + +   S  F 
Sbjct: 138 IVGLYKAIQKDDEISLFKAMVASVYLESFLFY 169


>gi|312137650|ref|YP_004004986.1| ribonucleoside-diphosphate reductase beta subunit nrdf [Rhodococcus
           equi 103S]
 gi|311886989|emb|CBH46298.1| ribonucleoside-diphosphate reductase beta subunit NrdF [Rhodococcus
           equi 103S]
          Length = 322

 Score = 74.9 bits (183), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 7/127 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN-NIVL 102
           E +     N W+P ++P+ +DLA W +   LTD ER M  R        ++  A    V 
Sbjct: 24  EVWDRLTGNFWLPEKIPLSNDLASWAT---LTDTEREMTIRVFTGLTLLDTAQATVGAVA 80

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
            I   ++ P     L   AF E+VH+ ++  I ++L         F      P +  KA 
Sbjct: 81  MIADAVT-PHEEAVLTNMAFMESVHAKSYSSIFSTLCSTRQIDAAFEWSERNPHLQRKAQ 139

Query: 161 WALQYTQ 167
             + Y +
Sbjct: 140 IVVDYYR 146


>gi|238794433|ref|ZP_04638043.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           intermedia ATCC 29909]
 gi|238726228|gb|EEQ17772.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           intermedia ATCC 29909]
          Length = 330

 Score = 74.9 bits (183), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 56/138 (40%), Gaps = 5/138 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     + +     N W+P +VP+ +D+  W +   LT +E+ +  R        
Sbjct: 21  NWNKIEDDKDLDVWNRLTANFWLPEKVPLSNDIPSWAT---LTPNEQQLTIRVFTGLTLL 77

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYR 150
           +++       A+ +    P         +F EAVH+ ++  I ++L +  D  + +    
Sbjct: 78  DTIQNTLGAPALIKDAITPHEEAVFSNISFMEAVHARSYSSIFSTLCMTSDVDDAYRWSE 137

Query: 151 EVPSITAKANWALQYTQT 168
           E   +  KA+  LQ+   
Sbjct: 138 ENGPLQKKADIILQHYHN 155


>gi|255023762|ref|ZP_05295748.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes FSL J1-208]
          Length = 284

 Score = 74.9 bits (183), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 52/130 (40%), Gaps = 4/130 (3%)

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
             K    L++ E+      +G  A+ +S     I   I  ++++P         A +E +
Sbjct: 1   DAKQYPALSEQEKYAFDAIIGLLATLDSPQTRFIY-NIAEYITDPAVHANAAIIAQQEVI 59

Query: 127 HSHTFQYIITSLG--LDEGELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRS 183
           H+ ++ Y++ S+    ++  +F + R  P+I  +    +  Y   +++ +     K    
Sbjct: 60  HNESYSYVLASITNLQEQNRVFELARTHPTIIKRNEPIMDAYDDFMNNKTGETLVKALIQ 119

Query: 184 RILTRSLRFL 193
             +   + F 
Sbjct: 120 SSILEGINFY 129


>gi|120403054|ref|YP_952883.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           vanbaalenii PYR-1]
 gi|119955872|gb|ABM12877.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Mycobacterium vanbaalenii PYR-1]
          Length = 324

 Score = 74.9 bits (183), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 55/127 (43%), Gaps = 7/127 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W   N LT  E+ +  R        +++      ++
Sbjct: 26  EVWERLTGNFWLPEKVPVSNDIPSW---NTLTAHEKQLTMRVFTGLTLLDTIQGTVGAVS 82

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY---REVPSITAKAN 160
           +      P         AF E+VH+ ++  I ++L     E+ + +    E P++  KA 
Sbjct: 83  LIPDALTPHEEAVYTNIAFMESVHARSYSNIFSTLCS-TAEIDDAFRWSEENPNLQRKAE 141

Query: 161 WALQYTQ 167
             +QY +
Sbjct: 142 IVMQYYK 148


>gi|238750475|ref|ZP_04611976.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia rohdei
           ATCC 43380]
 gi|238711406|gb|EEQ03623.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia rohdei
           ATCC 43380]
          Length = 323

 Score = 74.9 bits (183), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 56/138 (40%), Gaps = 5/138 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +     N W+P +VP+ +D+  W +   LT +E+ +  R        
Sbjct: 14  NWNKIEDDKDLEVWNRLTANFWLPEKVPLSNDIPSWAT---LTPNEQQLTIRVFTGLTLL 70

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYR 150
           +++       A+ +    P         +F EAVH+ ++  I ++L +  D  + +    
Sbjct: 71  DTIQNTLGAPALIKDAITPHEEAVFSNISFMEAVHARSYSSIFSTLCMTSDVDDAYRWSE 130

Query: 151 EVPSITAKANWALQYTQT 168
           E   +  KA+  LQ+   
Sbjct: 131 ENGPLQKKADIILQHYHN 148


>gi|172041159|ref|YP_001800873.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           urealyticum DSM 7109]
 gi|171852463|emb|CAQ05439.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           urealyticum DSM 7109]
          Length = 331

 Score = 74.9 bits (183), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 50/126 (39%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W +   L D E+    R        +++      ++
Sbjct: 33  EVWDRLTANFWLPEKVPVSNDIQSWAT---LNDAEKNATMRVFTGLTMLDTIQGTVGAVS 89

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +    +       L   AF E+VH+ ++  I  +L       + F    E  ++  K   
Sbjct: 90  LIPEATTMHEEAVLTNIAFMESVHAKSYSQIFMTLASTREINDAFRWSEENENLQRKGEI 149

Query: 162 ALQYTQ 167
            LQY +
Sbjct: 150 ILQYYK 155


>gi|114766102|ref|ZP_01445111.1| ribonucleoside-diphosphate reductase, beta subunit protein
           [Pelagibaca bermudensis HTCC2601]
 gi|114541657|gb|EAU44698.1| ribonucleoside-diphosphate reductase, beta subunit protein
           [Roseovarius sp. HTCC2601]
          Length = 326

 Score = 74.9 bits (183), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 34/146 (23%), Positives = 59/146 (40%), Gaps = 5/146 (3%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
                   L+     E +     N W+P +VP+ +D+  W +   LT++ER +  R    
Sbjct: 13  PRAINWNRLQDEKDLEVWNRLTVNFWLPEKVPLSNDVQSWAT---LTEEERQLTIRVFTG 69

Query: 89  FASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELF 146
               +++  +    A+      P     L   AF EAVH+ ++  I ++L    +  E F
Sbjct: 70  LTLLDTIQNSVGAPAMMPDCLTPHEESVLTNIAFMEAVHARSYSSIFSTLCSTREVDEAF 129

Query: 147 NMYREVPSITAKANWALQYTQTLSSP 172
               E P + AKA   L+     + P
Sbjct: 130 RWSDENPHLQAKARAVLETYAPEADP 155


>gi|16078802|ref|NP_389621.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|221309618|ref|ZP_03591465.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|221313941|ref|ZP_03595746.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. subtilis str. NCIB 3610]
 gi|221318864|ref|ZP_03600158.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. subtilis str. JH642]
 gi|221323136|ref|ZP_03604430.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. subtilis str. SMY]
 gi|321315508|ref|YP_004207795.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis BSn5]
 gi|1710395|sp|P50621|RIR2_BACSU RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|1154633|emb|CAA92811.1| NrdF [Bacillus subtilis subsp. subtilis str. 168]
 gi|2634123|emb|CAB13623.1| ribonucleoside-diphosphate reductase (minor subunit) [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|116733911|gb|ABK20014.1| ribonucleotide-diphosphate reductase beta [synthetic construct]
 gi|291484287|dbj|BAI85362.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. natto BEST195]
 gi|320021782|gb|ADV96768.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis BSn5]
          Length = 329

 Score = 74.9 bits (183), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 54/152 (35%), Gaps = 6/152 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            Y       W+P E+ +  DL  WK    L  +E+    + L      ++   N  +  +
Sbjct: 21  FYNQNVKQFWLPEEIALNGDLLTWK---YLGKNEQDTYMKVLAGLTLLDTEQGNTGMPIV 77

Query: 105 YRHLSNPECRQYLLRQAFEEA-VHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
             H+   + +  L   A  E  VH+ ++  I  +L   E   E+F   ++   +  KA  
Sbjct: 78  AEHVDGHQRKAVLNFMAMMENAVHAKSYSNIFMTLAPTETINEVFEWVKQNKYLQKKAQM 137

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            +   + +         K   + +   S  F 
Sbjct: 138 IVGLYKAIQKDDEISLFKAMVASVYLESFLFY 169


>gi|213693323|ref|YP_002323909.1| Ribonucleoside-diphosphate reductase [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|213524784|gb|ACJ53531.1| Ribonucleoside-diphosphate reductase [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|320459505|dbj|BAJ70126.1| ribonucleotide-diphosphate reductase beta subunit [Bifidobacterium
           longum subsp. infantis ATCC 15697]
          Length = 330

 Score = 74.9 bits (183), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 51/126 (40%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W+    +T+DE  +  R        +++      ++
Sbjct: 32  EVWDRLTGNFWLPEKVPVSNDIPSWQK---MTEDEHTLTMRVFTGLTLLDTIQGTVGAVS 88

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +      P         AF E+VH+ ++  I ++L   E     F+       +  KA  
Sbjct: 89  LIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTEQIDAAFDWSENNEFLQKKAEI 148

Query: 162 ALQYTQ 167
            L Y +
Sbjct: 149 VLDYYE 154


>gi|315605404|ref|ZP_07880447.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces sp.
           oral taxon 180 str. F0310]
 gi|315312973|gb|EFU61047.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces sp.
           oral taxon 180 str. F0310]
          Length = 329

 Score = 74.5 bits (182), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 32/137 (23%), Positives = 54/137 (39%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +     N W+P +VP+ +DL  WK+   LT  E+LM  R        
Sbjct: 20  NWNKIQDEKDLEVWDRLTGNFWLPEKVPLSNDLPSWKT---LTKGEQLMTNRVFTGLTLL 76

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYR 150
           ++L      +++      P         AF E+VH+ ++  I ++L   E   E F    
Sbjct: 77  DTLQGTVGAVSLIPDARTPHEEAVYTNIAFMESVHAKSYSSIFSTLLSTEEINESFRWSN 136

Query: 151 EVPSITAKANWALQYTQ 167
           E  ++  KA     Y  
Sbjct: 137 ENAALQKKAEIIKSYYD 153


>gi|260904342|ref|ZP_05912664.1| ribonucleotide-diphosphate reductase subunit beta [Brevibacterium
           linens BL2]
          Length = 326

 Score = 74.5 bits (182), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 55/118 (46%), Gaps = 5/118 (4%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           N W+P +VP+ +D+  W +   LT++E+ +  R        +++      +++      P
Sbjct: 36  NFWLPEKVPLSNDIPSWAT---LTEEEKTLTMRVFTGLTLLDTIQGTVGAISLIPDAVTP 92

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANWALQYTQ 167
                +   AF E+VH+ ++  I ++L    +  E F   RE   + +KA+  L Y +
Sbjct: 93  HEEAVMTNIAFMESVHAKSYSSIFSTLCSTKEIDEAFRWSRENTYLQSKADIILSYYR 150


>gi|289705575|ref|ZP_06501967.1| ribonucleoside-diphosphate reductase, beta subunit [Micrococcus
           luteus SK58]
 gi|289557804|gb|EFD51103.1| ribonucleoside-diphosphate reductase, beta subunit [Micrococcus
           luteus SK58]
          Length = 323

 Score = 74.5 bits (182), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 5/129 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    NN W+P +VP+ +D+  W   + LTD+ERL+  R        
Sbjct: 14  NWNRIQDEKDVEVWNRLVNNFWLPEKVPLSNDVQSW---SHLTDEERLLSMRVFTGLTLL 70

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYR 150
           +++      +++      P     L   AF E+VH+ ++  I ++L       E F   R
Sbjct: 71  DTIQGTVGAVSLIPDAMTPHEEAVLTNIAFMESVHAKSYSSIFSTLASTPEIDEAFRWSR 130

Query: 151 EVPSITAKA 159
           E  ++ AKA
Sbjct: 131 ENRNLQAKA 139


>gi|23465253|ref|NP_695856.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           longum NCC2705]
 gi|23325884|gb|AAN24492.1| ribonucleoside-diphosphate reductase 2 beta chain [Bifidobacterium
           longum NCC2705]
          Length = 330

 Score = 74.5 bits (182), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 51/126 (40%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W+    +T+DE  +  R        +++      ++
Sbjct: 32  EVWDRLTGNFWLPEKVPVSNDIPSWQK---MTEDEHTLTMRVFTGLTLLDTIQGTVGAVS 88

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +      P         AF E+VH+ ++  I ++L   E     F+       +  KA  
Sbjct: 89  LIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTEQIDAAFDWSENNEFLQKKAEI 148

Query: 162 ALQYTQ 167
            L Y +
Sbjct: 149 VLDYYE 154


>gi|94985875|ref|YP_605239.1| ribonucleotide-diphosphate reductase subunit beta [Deinococcus
           geothermalis DSM 11300]
 gi|94556156|gb|ABF46070.1| Ribonucleoside-diphosphate reductase [Deinococcus geothermalis DSM
           11300]
          Length = 319

 Score = 74.5 bits (182), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 42/116 (36%), Gaps = 5/116 (4%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            Y+      W   E+P+  D A W+    L+  ER    R      + ++L     +  +
Sbjct: 19  FYIQQQAQLWFSEEIPIASDAADWR---ALSPAERTCYTRVSAGLNAMDTLQGEVGMPLL 75

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAK 158
                + + +  L   AF E VH+ ++     +     +E E F      P +  K
Sbjct: 76  AAGEDDHQRKATLAMFAFMENVHARSYSMANKTFLSASEEREAFEWIEMQPHLQRK 131


>gi|291570483|dbj|BAI92755.1| ribonucleoside-diphosphate reductase beta chain [Arthrospira
           platensis NIES-39]
          Length = 131

 Score = 74.5 bits (182), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 44/106 (41%), Gaps = 4/106 (3%)

Query: 92  SESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE--LFNMY 149
            +S+   NI   I   ++ PE    +  Q  +E +H+ ++QY+I ++   E    +++ +
Sbjct: 1   MDSIQTCNIP-YIKNSVTAPEVSLCMAEQISQEGMHNQSYQYMIETIIPSERRNYVYDFW 59

Query: 150 REVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           R    +  +  +    Y Q +  P+   +     +  L   + F  
Sbjct: 60  RTDKVLRDRCEFIAGLYQQYVDDPTPENYFVSLMADYLLEGMYFYN 105


>gi|322692090|ref|YP_004221660.1| ribonucleotide-diphosphate reductase beta subunit [Bifidobacterium
           longum subsp. longum JCM 1217]
 gi|320456946|dbj|BAJ67568.1| ribonucleotide-diphosphate reductase beta subunit [Bifidobacterium
           longum subsp. longum JCM 1217]
          Length = 330

 Score = 74.5 bits (182), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 51/126 (40%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W+    +T+DE  +  R        +++      ++
Sbjct: 32  EVWDRLTGNFWLPEKVPVSNDIPSWQK---MTEDEHTLTMRVFTGLTLLDTIQGTVGAVS 88

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +      P         AF E+VH+ ++  I ++L   E     F+       +  KA  
Sbjct: 89  LIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTEQIDAAFDWSENNEFLQKKAEI 148

Query: 162 ALQYTQ 167
            L Y +
Sbjct: 149 VLDYYE 154


>gi|296455120|ref|YP_003662264.1| ribonucleoside-diphosphate reductase [Bifidobacterium longum subsp.
           longum JDM301]
 gi|296184552|gb|ADH01434.1| Ribonucleoside-diphosphate reductase [Bifidobacterium longum subsp.
           longum JDM301]
          Length = 330

 Score = 74.5 bits (182), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 51/126 (40%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W+    +T+DE  +  R        +++      ++
Sbjct: 32  EVWDRLTGNFWLPEKVPVSNDIPSWQK---MTEDEHTLTMRVFTGLTLLDTIQGTVGAVS 88

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +      P         AF E+VH+ ++  I ++L   E     F+       +  KA  
Sbjct: 89  LIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTEQIDAAFDWSENNEFLQKKAEI 148

Query: 162 ALQYTQ 167
            L Y +
Sbjct: 149 VLDYYE 154


>gi|296140644|ref|YP_003647887.1| ribonucleoside-diphosphate reductase [Tsukamurella paurometabola
           DSM 20162]
 gi|296028778|gb|ADG79548.1| Ribonucleoside-diphosphate reductase [Tsukamurella paurometabola
           DSM 20162]
          Length = 334

 Score = 74.5 bits (182), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 52/126 (41%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W     LTD E+ +  R        +++      ++
Sbjct: 36  EVWDRLTGNFWLPEKVPVSNDIPSW---GTLTDYEKQLTMRVFTGLTLLDTIQGTVGAVS 92

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +    + P     L   AF E+VH+ ++  I ++L       + F    E   +  KA  
Sbjct: 93  LIPDATTPHEEAVLTNIAFMESVHAKSYSSIFSTLCSTREIDDAFRWSEENEQLQRKAQI 152

Query: 162 ALQYTQ 167
            + + +
Sbjct: 153 VMDFYR 158


>gi|239622882|ref|ZP_04665913.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Bifidobacterium longum subsp. infantis CCUG 52486]
 gi|312133660|ref|YP_004000999.1| nrdf [Bifidobacterium longum subsp. longum BBMN68]
 gi|317482331|ref|ZP_07941351.1| ribonucleotide reductase [Bifidobacterium sp. 12_1_47BFAA]
 gi|322690138|ref|YP_004209872.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           longum subsp. infantis 157F]
 gi|239514879|gb|EEQ54746.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Bifidobacterium longum subsp. infantis CCUG 52486]
 gi|291517762|emb|CBK71378.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Bifidobacterium longum subsp. longum F8]
 gi|311772922|gb|ADQ02410.1| NrdF [Bifidobacterium longum subsp. longum BBMN68]
 gi|316916211|gb|EFV37613.1| ribonucleotide reductase [Bifidobacterium sp. 12_1_47BFAA]
 gi|320461474|dbj|BAJ72094.1| ribonucleotide-diphosphate reductase beta subunit [Bifidobacterium
           longum subsp. infantis 157F]
          Length = 330

 Score = 74.5 bits (182), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 51/126 (40%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W+    +T+DE  +  R        +++      ++
Sbjct: 32  EVWDRLTGNFWLPEKVPVSNDIPSWQK---MTEDEHTLTMRVFTGLTLLDTIQGTVGAVS 88

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +      P         AF E+VH+ ++  I ++L   E     F+       +  KA  
Sbjct: 89  LIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTEQIDAAFDWSENNEFLQKKAEI 148

Query: 162 ALQYTQ 167
            L Y +
Sbjct: 149 VLDYYE 154


>gi|296330954|ref|ZP_06873429.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. spizizenii ATCC 6633]
 gi|305674472|ref|YP_003866144.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. spizizenii str. W23]
 gi|296151959|gb|EFG92833.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. spizizenii ATCC 6633]
 gi|305412716|gb|ADM37835.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. spizizenii str. W23]
          Length = 329

 Score = 74.5 bits (182), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 54/152 (35%), Gaps = 6/152 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            Y       W+P E+ +  DL  WK    L  +E+    + L      ++   N  +  +
Sbjct: 21  FYNQNVKQFWLPEEIALNGDLLTWK---YLGKNEQDTYMKVLAGLTLLDTEQGNTGMPIV 77

Query: 105 YRHLSNPECRQYLLRQAFEEA-VHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
             H+   + +  L   A  E  VH+ ++  I  +L   E   E+F   ++   +  KA  
Sbjct: 78  AEHVDGHQRKAVLNFMAMMENAVHAKSYSNIFMTLAPTETINEVFEWVKQNKYLQKKAQI 137

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            +   + +         K   + +   S  F 
Sbjct: 138 IVGLYKAIQKDDEISLFKAMVASVYLESFLFY 169


>gi|325973169|ref|YP_004250233.1| ribonucleoside-diphosphate reductase subunit beta [Mycoplasma suis
           str. Illinois]
 gi|323651771|gb|ADX97853.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma suis
           str. Illinois]
          Length = 330

 Score = 74.5 bits (182), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 54/130 (41%), Gaps = 4/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W+  E+P+  D  +W+++  LT+ E+ +  + L      ++      +  I
Sbjct: 28  FWDQNVRQFWVDEEIPLSGDKLVWQAR--LTEKEKDVYVKVLVSLTLLDTHQGAIGMNRI 85

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
              + +   +  L   A  E +H+ ++  I  +L   E   ELF   ++ PS+  K +  
Sbjct: 86  CLAVPDLPTKAVLQFMAMMEQMHAKSYSSIFCTLLSTEQINELFEWIKKEPSLQKKVDIV 145

Query: 163 LQYTQTLSSP 172
           + Y + +   
Sbjct: 146 VSYYENIKDQ 155


>gi|311993498|ref|YP_004010363.1| NrdB aerobic NDP reductase small subunit [Acinetobacter phage Acj9]
 gi|295917455|gb|ADG60126.1| NrdB aerobic NDP reductase small subunit [Acinetobacter phage Acj9]
          Length = 379

 Score = 74.5 bits (182), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 60/146 (41%), Gaps = 3/146 (2%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           + + N+D        + V +   +K+    E      +  W P EV +  D + +   + 
Sbjct: 7   QAKFNIDQPMFFGPDTGVARYEIVKHQKFEELTTKQLSFFWRPEEVNLTTDKSQF---DK 63

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           L    ++    NLG+    +S+      + +    S+     +++   F E +HS ++ +
Sbjct: 64  LWAPYQIQFTDNLGYQILMDSVQGRAPAIVLASICSDVALETWIMTWTFSETIHSRSYTH 123

Query: 134 IITSLGLDEGELFNMYREVPSITAKA 159
           II +L  D  ++F+       I A+A
Sbjct: 124 IIRNLFSDPSKIFDGVLANKEIMARA 149


>gi|239917558|ref|YP_002957116.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Micrococcus luteus NCTC 2665]
 gi|281413955|ref|ZP_06245697.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Micrococcus luteus NCTC 2665]
 gi|239838765|gb|ACS30562.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Micrococcus luteus NCTC 2665]
          Length = 323

 Score = 74.5 bits (182), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 5/129 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    NN W+P +VP+ +D+  W   + LTD+ERL+  R        
Sbjct: 14  NWNRIQDEKDVEVWNRLVNNFWLPEKVPLSNDVQSW---SHLTDEERLLSMRVFTGLTLL 70

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYR 150
           +++      +++      P     L   AF E+VH+ ++  I ++L       E F   R
Sbjct: 71  DTIQGTVGAVSLIPDAMTPHEEAVLTNIAFMESVHAKSYSSIFSTLASTPEIDEAFRWSR 130

Query: 151 EVPSITAKA 159
           E  ++ AKA
Sbjct: 131 ENRNLQAKA 139


>gi|269217712|ref|ZP_06161566.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces sp.
           oral taxon 848 str. F0332]
 gi|269212647|gb|EEZ78987.1| ribonucleoside-diphosphate reductase, beta subunit [Actinomyces sp.
           oral taxon 848 str. F0332]
          Length = 325

 Score = 74.5 bits (182), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +     N W+P ++P+ +D+  W   + L   E+ M  R        
Sbjct: 16  NWNRIEDEKDLEVWDRLTGNFWLPEKIPLSNDIPSW---STLKPHEQQMTTRVFTGLTLL 72

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYR 150
           +++      +++      P     L   AF E+VH+ ++  I ++L   E   E F    
Sbjct: 73  DTVQGTVGAVSLIPDAVTPHEEAVLTNIAFMESVHAKSYSSIFSTLISTEEIDETFRWSE 132

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA   L Y +
Sbjct: 133 ENEYLQKKAKIILDYYR 149


>gi|227547058|ref|ZP_03977107.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           longum subsp. infantis ATCC 55813]
 gi|227212475|gb|EEI80364.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           longum subsp. infantis ATCC 55813]
          Length = 330

 Score = 74.5 bits (182), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 50/126 (39%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W+    +T+DE  +           +++      ++
Sbjct: 32  EVWDRLTGNFWLPEKVPVSNDIPSWQK---MTEDEHTLTMHVFTGLTLLDTIQGTVGAVS 88

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +      P         AF E+VH+ ++  I ++L   E     F+       +  KA  
Sbjct: 89  LIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTEQIDAAFDWSENNEFLQKKAEI 148

Query: 162 ALQYTQ 167
            L Y +
Sbjct: 149 VLDYYE 154


>gi|238762669|ref|ZP_04623638.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           kristensenii ATCC 33638]
 gi|238698974|gb|EEP91722.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           kristensenii ATCC 33638]
          Length = 323

 Score = 74.5 bits (182), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 55/138 (39%), Gaps = 5/138 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +     N W+P +VP+ +D+  W     LT +E+ +  R        
Sbjct: 14  NWNKIEDDKDLEVWNRLTANFWLPEKVPLSNDIPSWAK---LTAEEQQLTIRVFTGLTLL 70

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++       A+ +    P         +F EAVH+ ++  I ++L    D  E +    
Sbjct: 71  DTIQNTLGAPALIKDAITPHEEAVFSNISFMEAVHARSYSSIFSTLCSTPDVDEAYRWSE 130

Query: 151 EVPSITAKANWALQYTQT 168
           E  ++  KAN  L++   
Sbjct: 131 ENIALQKKANIILEHYNN 148


>gi|41409193|ref|NP_962029.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           avium subsp. paratuberculosis K-10]
 gi|41398013|gb|AAS05643.1| NrdG [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 324

 Score = 74.5 bits (182), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 55/127 (43%), Gaps = 7/127 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +DL  W +   LT  E+ M  R        +++      ++
Sbjct: 26  EVWDRLTGNFWLPEKVPVSNDLQSWAT---LTAHEKQMTMRVFTGLTLLDTIQGTVGAVS 82

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY---REVPSITAKAN 160
           +      P         AF E+VH+ ++  I ++L     E+ + +    E P++  KA 
Sbjct: 83  LIPDALTPHEEAVYTNIAFMESVHARSYSNIFSTLCS-TAEIDDAFRWSEENPNLQRKAE 141

Query: 161 WALQYTQ 167
             +QY +
Sbjct: 142 IVMQYYK 148


>gi|23335914|ref|ZP_00121145.1| COG0208: Ribonucleotide reductase, beta subunit [Bifidobacterium
           longum DJO10A]
 gi|189440326|ref|YP_001955407.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           longum DJO10A]
 gi|189428761|gb|ACD98909.1| Ribonucleotide reductase beta subunit [Bifidobacterium longum
           DJO10A]
          Length = 330

 Score = 74.5 bits (182), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 51/126 (40%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W+    +T+DE  +  R        +++      ++
Sbjct: 32  EVWDRLTGNFWLPEKVPVSNDIPSWQK---MTEDEHTLTMRVFTGLTLLDTIQGTVGAVS 88

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +      P         AF E+VH+ ++  I ++L   E     F+       +  KA  
Sbjct: 89  LIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTEQIDAAFDWSENNEFLQKKAEI 148

Query: 162 ALQYTQ 167
            L Y +
Sbjct: 149 VLDYYE 154


>gi|118465359|ref|YP_883075.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           avium 104]
 gi|118166646|gb|ABK67543.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
           avium 104]
          Length = 324

 Score = 74.5 bits (182), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 55/127 (43%), Gaps = 7/127 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +DL  W +   LT  E+ M  R        +++      ++
Sbjct: 26  EVWDRLTGNFWLPEKVPVSNDLQSWAT---LTAHEKQMTMRVFTGLTLLDTIQGTVGAVS 82

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY---REVPSITAKAN 160
           +      P         AF E+VH+ ++  I ++L     E+ + +    E P++  KA 
Sbjct: 83  LIPDALTPHEEAVYTNIAFMESVHARSYSNIFSTLCS-TAEIDDAFRWSEENPNLQRKAE 141

Query: 161 WALQYTQ 167
             +QY +
Sbjct: 142 IVMQYYK 148


>gi|325989612|ref|YP_004249311.1| ribonucleoside-diphosphate reductase beta chain [Mycoplasma suis
           KI3806]
 gi|323574697|emb|CBZ40353.1| Ribonucleoside-diphosphate reductase beta chain [Mycoplasma suis]
          Length = 330

 Score = 74.1 bits (181), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 54/130 (41%), Gaps = 4/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W+  E+P+  D  +W+++  LT+ E+ +  + L      ++      +  I
Sbjct: 28  FWDQNVRQFWVDEEIPLSGDKLVWQAR--LTEKEKDVYVKVLVSLTLLDTHQGAIGMNRI 85

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
              + +   +  L   A  E +H+ ++  I  +L   E   ELF   ++ PS+  K +  
Sbjct: 86  CLAVPDLPTKAVLQFMAMMEQMHAKSYSSIFCTLLSTEQINELFEWIKKEPSLQKKVDIV 145

Query: 163 LQYTQTLSSP 172
           + Y + +   
Sbjct: 146 VSYYENIKDQ 155


>gi|294338139|emb|CBJ93977.1| Probable ribonucleotide reductase (small subunit) [Campylobacter
           phage CP220]
          Length = 369

 Score = 74.1 bits (181), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 55/141 (39%), Gaps = 6/141 (4%)

Query: 25  LNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR 84
               S    +  +KY      +       W   EV    D A +   N L +  +    R
Sbjct: 21  TGKNSQRYDV--IKYPIFETLFKKMAGFDWQEDEVQCTKDQADF---NVLNEAMKHSYTR 75

Query: 85  NLGFFASSESLVANNIVLAIYRHLSNPECRQYLL-RQAFEEAVHSHTFQYIITSLGLDEG 143
            L      +S+    ++  I   ++NPE    +   Q FE + HS ++ +I+ S+  +  
Sbjct: 76  VLNKLIFLDSIQGRGLLQTIGSIVTNPELEVCMTEWQRFEISRHSRSYTHILRSVYANPS 135

Query: 144 ELFNMYREVPSITAKANWALQ 164
           ++F+   E+P +   A+   +
Sbjct: 136 KIFDESFEIPELLELADSISK 156


>gi|291455662|ref|ZP_06595052.1| ribonucleoside-diphosphate reductase, beta subunit [Bifidobacterium
           breve DSM 20213]
 gi|291382590|gb|EFE90108.1| ribonucleoside-diphosphate reductase, beta subunit [Bifidobacterium
           breve DSM 20213]
          Length = 330

 Score = 74.1 bits (181), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 50/126 (39%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W+    +T+DE  +           +++      ++
Sbjct: 32  EVWDRLTGNFWLPEKVPVSNDIPSWQK---MTEDEHTLTMHVFTGLTLLDTIQGTVGAVS 88

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +      P         AF E+VH+ ++  I ++L   E     F+       +  KA  
Sbjct: 89  LIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTEQIDAAFDWSENNEFLQKKAEI 148

Query: 162 ALQYTQ 167
            L Y +
Sbjct: 149 VLDYYE 154


>gi|225351964|ref|ZP_03742987.1| hypothetical protein BIFPSEUDO_03569 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157211|gb|EEG70550.1| hypothetical protein BIFPSEUDO_03569 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 330

 Score = 74.1 bits (181), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 65/163 (39%), Gaps = 11/163 (6%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           ++PI    +R+ + D+              L+     E +     N W+P +VP+ +DL 
Sbjct: 1   MAPISVPRQRIKLIDRV------SAINWNKLEDDKDLEVWDRLTGNFWLPEKVPVSNDLP 54

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
           +W++   +++ E  +  R        +++      +++      P         AF E+V
Sbjct: 55  VWRT---MSEAEHTLTMRVFTGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESV 111

Query: 127 HSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQ 167
           H+ ++  I ++L       E F+   E   +  KA   L Y +
Sbjct: 112 HAKSYSSIFSTLCSTRQIDEAFSWSEENEYLQRKARIVLDYYE 154


>gi|296171158|ref|ZP_06852606.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           parascrofulaceum ATCC BAA-614]
 gi|295894294|gb|EFG74049.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           parascrofulaceum ATCC BAA-614]
          Length = 324

 Score = 74.1 bits (181), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 55/127 (43%), Gaps = 7/127 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +DL  W +   LT  E+ +  R        +++      ++
Sbjct: 26  EVWDRLTGNFWLPEKVPVSNDLPSWAT---LTSGEKQLTMRVFTGLTLLDTIQGTVGAVS 82

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY---REVPSITAKAN 160
           +      P         AF E+VH+ ++  I ++L     E+ + +    E P++  KA 
Sbjct: 83  LIPDALTPHEEAVYTNIAFMESVHARSYSNIFSTLCS-TAEIDDAFRWSEENPNLQRKAE 141

Query: 161 WALQYTQ 167
             +QY +
Sbjct: 142 IVMQYYK 148


>gi|212716021|ref|ZP_03324149.1| hypothetical protein BIFCAT_00933 [Bifidobacterium catenulatum DSM
           16992]
 gi|212661388|gb|EEB21963.1| hypothetical protein BIFCAT_00933 [Bifidobacterium catenulatum DSM
           16992]
          Length = 330

 Score = 74.1 bits (181), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 64/163 (39%), Gaps = 11/163 (6%)

Query: 7   LSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           ++PI    +R+ + D+              L+     E +     N W+P +VP+ +DL 
Sbjct: 1   MAPISVPRQRIKLIDRV------SAINWNKLEDDKDLEVWDRLTGNFWLPEKVPVSNDLP 54

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
           +W+    +++ E  +  R        +++      +++      P         AF E+V
Sbjct: 55  VWR---AMSEAEHTLTMRVFTGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESV 111

Query: 127 HSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQ 167
           H+ ++  I ++L       E F+   E   +  KA   L Y +
Sbjct: 112 HAKSYSSIFSTLCSTRQIDEAFSWSEENEYLQRKARIVLDYYE 154


>gi|319938784|ref|ZP_08013148.1| ribonucleoside-diphosphate reductase [Streptococcus anginosus
           1_2_62CV]
 gi|319811834|gb|EFW08100.1| ribonucleoside-diphosphate reductase [Streptococcus anginosus
           1_2_62CV]
          Length = 319

 Score = 74.1 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L+ +E+ ++ +  G     +++ + + V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSPEEKDLVGKVFGGLTLLDTMQSQSGVE 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           AI   +  P     L    F E+VH+ ++  I ++L       E+F      P +  KA 
Sbjct: 76  AIRGDIRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKSEIDEIFEWTNTNPYLQKKAE 135


>gi|315223183|ref|ZP_07865044.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           anginosus F0211]
 gi|315187615|gb|EFU21369.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           anginosus F0211]
          Length = 319

 Score = 74.1 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L+ +E+ ++ +  G     +++ + + V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSPEEKDLVGKVFGGLTLLDTMQSQSGVE 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           AI   +  P     L    F E+VH+ ++  I ++L       E+F      P +  KA 
Sbjct: 76  AIRGDIRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKSEIDEIFEWTNTNPYLQKKAE 135


>gi|254776333|ref|ZP_05217849.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           avium subsp. avium ATCC 25291]
          Length = 320

 Score = 74.1 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 55/127 (43%), Gaps = 7/127 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +DL  W +   LT  E+ M  R        +++      ++
Sbjct: 22  EVWDRLTGNFWLPEKVPVSNDLQSWAT---LTAHEKQMTIRVFTGLTLLDTIQGTVGAVS 78

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY---REVPSITAKAN 160
           +      P         AF E+VH+ ++  I ++L     E+ + +    E P++  KA 
Sbjct: 79  LIPDALTPHEEAVYTNIAFMESVHARSYSNIFSTLCS-TAEIDDAFRWSEENPNLQRKAE 137

Query: 161 WALQYTQ 167
             +QY +
Sbjct: 138 IVMQYYK 144


>gi|229818600|ref|YP_002880126.1| Ribonucleoside-diphosphate reductase [Beutenbergia cavernae DSM
           12333]
 gi|229564513|gb|ACQ78364.1| Ribonucleoside-diphosphate reductase [Beutenbergia cavernae DSM
           12333]
          Length = 326

 Score = 74.1 bits (181), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 53/126 (42%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +    NN W+P +VP+ +D+  W     LTD E+ +  R        +++      ++
Sbjct: 28  EVWNRLVNNFWLPEKVPVSNDIPSW---GTLTDVEKTLTMRVFTGLTLLDTIQGTVGAVS 84

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +      P         AF E+VH+ ++  I ++L       + F    E  ++  KA  
Sbjct: 85  LIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTREIDDAFRWSEENSNLQRKAEI 144

Query: 162 ALQYTQ 167
            ++Y +
Sbjct: 145 VMEYYR 150


>gi|294338336|emb|CBJ94375.1| Probable ribonucleotide reductase (small subunit) [Campylobacter
           phage CPt10]
          Length = 369

 Score = 73.7 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 55/141 (39%), Gaps = 6/141 (4%)

Query: 25  LNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR 84
               S    +  +KY      +       W   EV    D A +   N L +  +    R
Sbjct: 21  TGKNSQRYDV--IKYPIFETLFKKMAGFDWQEDEVQCTKDQADF---NVLNEAMKHSYTR 75

Query: 85  NLGFFASSESLVANNIVLAIYRHLSNPECRQYLL-RQAFEEAVHSHTFQYIITSLGLDEG 143
            L      +S+    ++  I   ++NPE    +   Q FE + HS ++ +I+ S+  +  
Sbjct: 76  VLNKLIFLDSIQGRGLLQTIGSIVTNPELEVCMTEWQRFEISRHSRSYTHILRSVYANPS 135

Query: 144 ELFNMYREVPSITAKANWALQ 164
           ++F+   E+P +   A+   +
Sbjct: 136 KIFDESFEIPVLLELADSISK 156


>gi|269794349|ref|YP_003313804.1| ribonucleoside-diphosphate reductase class Ib subunit beta
           [Sanguibacter keddieii DSM 10542]
 gi|269096534|gb|ACZ20970.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Sanguibacter keddieii DSM 10542]
          Length = 325

 Score = 73.7 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 52/126 (41%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W +   LT  E+ +  R        +++      ++
Sbjct: 27  EVWDRLTGNFWLPEKVPVSNDIQSWAT---LTPVEKELTTRVFTGLTLLDTIQGTVGAVS 83

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +      P         AF E+VH+ ++  I ++L   +   + F    E  ++  KA  
Sbjct: 84  LIPDAITPHEEAVYTNIAFMESVHAKSYSSIFSTLISTQEIDDAFRWSEENANLQRKAEI 143

Query: 162 ALQYTQ 167
            L+Y  
Sbjct: 144 VLEYYH 149


>gi|320095222|ref|ZP_08026924.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces sp.
           oral taxon 178 str. F0338]
 gi|319977850|gb|EFW09491.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces sp.
           oral taxon 178 str. F0338]
          Length = 319

 Score = 73.7 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 55/146 (37%), Gaps = 5/146 (3%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           M     +      ++     E +     N W+P +VP+ +DL  W++   L  DE+ M  
Sbjct: 1   MTGPVFEAINWNRIQDDKDLEVWDRLTGNFWLPEKVPLSNDLPSWQT---LNKDEQTMTN 57

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE- 142
           R        ++L      +++      P         AF E+VH+ ++  I ++L   E 
Sbjct: 58  RVFTGLTLLDTLQGTVGAVSLIPDARTPHEEAVYTNIAFMESVHAKSYSSIFSTLLSTEE 117

Query: 143 -GELFNMYREVPSITAKANWALQYTQ 167
             E F    E  ++  KA     Y  
Sbjct: 118 INESFRWSNENEALQRKAQIIKSYYD 143


>gi|161502142|ref|YP_001569254.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. arizonae serovar 62:z4,z23:-- str.
           RSK2980]
 gi|160863489|gb|ABX20112.1| hypothetical protein SARI_00165 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 319

 Score = 73.7 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 52/133 (39%), Gaps = 5/133 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +D+  W++   L   E+ +  R        
Sbjct: 10  NWNKIQDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LNAAEQQLTIRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTIQNIAGAPSLMADAITPHEEAVLSNISFMEAVHARSYSSIFSTLCQSKDVDAAYAWSE 126

Query: 151 EVPSITAKANWAL 163
           E P +  KA   +
Sbjct: 127 ENPQLQRKAQIMM 139


>gi|254820788|ref|ZP_05225789.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           intracellulare ATCC 13950]
          Length = 324

 Score = 73.7 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 54/127 (42%), Gaps = 7/127 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +DL  W     LT  E+ M  R        +++      ++
Sbjct: 26  EVWDRLTGNFWLPEKVPVSNDLPSW---GTLTAHEKQMTMRVFTGLTLLDTIQGTVGAVS 82

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY---REVPSITAKAN 160
           +      P         AF E+VH+ ++  I ++L     E+ + +    E P++  KA 
Sbjct: 83  LIPDALTPHEEAVYTNIAFMESVHARSYSNIFSTLCS-TAEIDDAFRWSEENPNLQRKAE 141

Query: 161 WALQYTQ 167
             +QY +
Sbjct: 142 IVMQYYK 148


>gi|322831489|ref|YP_004211516.1| Ribonucleoside-diphosphate reductase [Rahnella sp. Y9602]
 gi|321166690|gb|ADW72389.1| Ribonucleoside-diphosphate reductase [Rahnella sp. Y9602]
          Length = 327

 Score = 73.7 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +D+  W +   L+  E+ +  R        
Sbjct: 18  NWNKIQDDKDLEVWNRLTSNFWLPEKVPLSNDIPSWAT---LSAKEKQLTIRVFTGLTLL 74

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++        + +    P          F EAVH+ ++  I ++L   +D  E +    
Sbjct: 75  DTVQNVVGAPTLMKDAVTPHEEAVYSNICFMEAVHARSYSSIFSTLCATVDVDEAYRWSE 134

Query: 151 EVPSITAKANWALQYTQ 167
           E  ++  KA   L Y  
Sbjct: 135 ENVALQNKAAIILSYYD 151


>gi|300776394|ref|ZP_07086252.1| ribonucleoside-diphosphate reductase [Chryseobacterium gleum ATCC
           35910]
 gi|300501904|gb|EFK33044.1| ribonucleoside-diphosphate reductase [Chryseobacterium gleum ATCC
           35910]
          Length = 371

 Score = 73.7 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 55/143 (38%), Gaps = 8/143 (5%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
                P +Y    +   +   + W+ +EV    D+  + S   L   E+  +K  L   A
Sbjct: 54  RVSYKPFEYPEVLQFVEAINKSFWVHSEVDFTADVQDFHS--QLEPHEKHAVKNALLAIA 111

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
             E  V       +Y HL  PE        A  E  HS  +  ++  LG +  E  N+  
Sbjct: 112 QIEVSVKTFWG-NLYNHLPKPEFNGLGSTFAECEFRHSEAYSRLLEVLGYN-DEFLNVIE 169

Query: 151 EVPSITAKANW---ALQYTQTLS 170
            +P++  +  +   AL++  + +
Sbjct: 170 -IPAVKGRIEFLGNALKHANSAT 191


>gi|284009251|emb|CBA76360.1| ribonucleoside-diphosphate reductase beta chain [Arsenophonus
           nasoniae]
          Length = 321

 Score = 73.7 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 60/143 (41%), Gaps = 5/143 (3%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           + N+         ++     E +     N W+P ++P+ +D+  W   N LT +E+ +  
Sbjct: 3   ITNSIVRAINWNRIEDDKDLEVWNKLTTNFWLPEKIPLSNDIPTW---NTLTKEEKKLTI 59

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--D 141
           R        +++  N    A+      P     +   +F EAVH+ ++  I ++L L  D
Sbjct: 60  RVFTGLTLLDTIQNNVGAPALMTDALTPHEEAVMSNISFMEAVHARSYSSIFSTLCLTTD 119

Query: 142 EGELFNMYREVPSITAKANWALQ 164
             + +    E  ++  KA+  L+
Sbjct: 120 VDDAYQWSEENSALQKKAHLILE 142


>gi|240169547|ref|ZP_04748206.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium
           kansasii ATCC 12478]
          Length = 320

 Score = 73.7 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 56/127 (44%), Gaps = 7/127 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W     LT +E+ +  R        +++      ++
Sbjct: 22  EVWDRLTGNFWLPEKVPVSNDIPSW---GTLTANEKQLTMRVFTGLTMLDTIQGTVGAVS 78

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY---REVPSITAKAN 160
           +      P     L   AF E+VH+ ++  I ++L     E+ + +    E P++  KA 
Sbjct: 79  LIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCS-TAEIDDAFRWSEENPNLQRKAE 137

Query: 161 WALQYTQ 167
             LQY +
Sbjct: 138 IVLQYYR 144


>gi|299537049|ref|ZP_07050352.1| ribonucleoside-diphosphate reductase subunit beta [Lysinibacillus
           fusiformis ZC1]
 gi|298727290|gb|EFI67862.1| ribonucleoside-diphosphate reductase subunit beta [Lysinibacillus
           fusiformis ZC1]
          Length = 322

 Score = 73.7 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 58/154 (37%), Gaps = 7/154 (4%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
           A   +       W P E+ +  D+  WKS        +   K+        +++  N  +
Sbjct: 19  AQIFWDQQWKQIWFPEEIAVSKDIKQWKSFEH-----QDTYKKVFAGLTLLDTVQTNIGM 73

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKA 159
             +  +  + + +  L      EA+H+ ++ YI T+L  +E   ELF   ++   +  KA
Sbjct: 74  NRVAAYTDDLQEKAVLTVFDAFEAIHAKSYSYIFTTLCTNEEIDELFEWVKKNEFLQYKA 133

Query: 160 NWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           N       ++   +     K   S ++  S  F 
Sbjct: 134 NKIADIYNSIEEGNPESLWKAMFSSVMLESFLFY 167


>gi|295134784|ref|YP_003585460.1| ribonucleotide reductase [Zunongwangia profunda SM-A87]
 gi|294982799|gb|ADF53264.1| ribonucleotide reductase [Zunongwangia profunda SM-A87]
          Length = 324

 Score = 73.7 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 61/162 (37%), Gaps = 13/162 (8%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
                P +Y    +   +   + W+ +EV    D+  + S   LT  E+ ++K++L   A
Sbjct: 7   RLNYKPFEYPGVLDFTDAINQSFWVHSEVDFTADVQDFHS--HLTTGEKDVVKKSLLAIA 64

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
             E  V +     +Y+HL  PE        A  E  HS  +  ++  LG +    F    
Sbjct: 65  QIEVAVKSFWGD-LYKHLPKPEFNGLGSTFAECEFRHSQAYSRLLEVLGYNNE--FAKVV 121

Query: 151 EVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           EVP+I  +  +  +        +  +         ++  + F
Sbjct: 122 EVPAIKKRIAYLTE--------ALEHTKAEDPKDYVSSLILF 155


>gi|126650012|ref|ZP_01722245.1| ribonucleotide-diphosphate [Bacillus sp. B14905]
 gi|126593184|gb|EAZ87146.1| ribonucleotide-diphosphate [Bacillus sp. B14905]
          Length = 322

 Score = 73.3 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 7/154 (4%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
           A   +       W P E+ +  D+  WKS        +   K+        +++  N  +
Sbjct: 19  AQIFWDQQWKQIWFPEEIAVSKDIKQWKSFEH-----QDTYKKVFAGLTLLDTVQTNIGM 73

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKA 159
             +  +  + + +  L      EA+H+ ++ YI T+L  +E   ELF   ++   +  KA
Sbjct: 74  NRVAAYTDDLQEKAVLTVFDAFEAIHAKSYSYIFTTLCTNEEIDELFEWVKKNEYLQYKA 133

Query: 160 NWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           N       ++         K   S ++  S  F 
Sbjct: 134 NKIADIYNSIEEGDSESLWKAMFSSVMLESFLFY 167


>gi|319948549|ref|ZP_08022680.1| ribonucleotide-diphosphate reductase subunit beta [Dietzia cinnamea
           P4]
 gi|319437796|gb|EFV92785.1| ribonucleotide-diphosphate reductase subunit beta [Dietzia cinnamea
           P4]
          Length = 338

 Score = 73.3 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 5/117 (4%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           N W+P +VP+ +D+  W++   LT+ E+ M  R        +++      +++    S P
Sbjct: 48  NFWLPEKVPVSNDIPSWQT---LTEYEQTMTARVFTGLTLLDTIQGTVGAVSMIPDASTP 104

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYT 166
                L   AF E+VH+ ++  I ++L       E F    E P +  KA   L Y 
Sbjct: 105 HEEAVLTNIAFMESVHAKSYSTIFSTLCSTPQIDEAFRWAEENPYLQRKAKIILGYY 161


>gi|227504013|ref|ZP_03934062.1| ribonucleoside-diphosphate reductase [Corynebacterium striatum ATCC
           6940]
 gi|227199407|gb|EEI79455.1| ribonucleoside-diphosphate reductase [Corynebacterium striatum ATCC
           6940]
          Length = 329

 Score = 73.3 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 51/126 (40%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +DL  WK+   LT+ E+    R        +++      ++
Sbjct: 31  EVWDRLTGNFWLPEKVPVSNDLQSWKT---LTEHEQQTTMRVFAGLTLLDTIQGTVGAVS 87

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +      P         AF E+VH+ ++  I  +L       + F    E  ++  KA  
Sbjct: 88  LLPDAKTPHEEAVYTNIAFMESVHAKSYSNIFMTLASTPMINDAFRWSEENENLQRKAKI 147

Query: 162 ALQYTQ 167
            + Y +
Sbjct: 148 VMSYYK 153


>gi|326536370|ref|YP_004300811.1| NrdB aerobic NDP reductase small subunit [Acinetobacter phage 133]
 gi|299483451|gb|ADJ19545.1| NrdB aerobic NDP reductase small subunit [Acinetobacter phage 133]
          Length = 382

 Score = 73.3 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 57/147 (38%), Gaps = 1/147 (0%)

Query: 14  EKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           +   N+D        + V +   +K+    E      +  W P EV +  D A +     
Sbjct: 7   QNEFNIDQPMFFGDDTGVARYEIVKHEKFEELTTKQLSFFWRPEEVNLTTDKAQFDKLWE 66

Query: 74  LTDDE-RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
                 + +   NLG+    +S+      + +    S+     +++   F E +HS ++ 
Sbjct: 67  TNRGHLQTIFTDNLGYQILMDSVQGRAPAIVLASICSDVALETWIMTWTFSETIHSRSYT 126

Query: 133 YIITSLGLDEGELFNMYREVPSITAKA 159
           +II +L  D  ++F+       I A+A
Sbjct: 127 HIIRNLYSDPSKIFDGVLANKEIMARA 153


>gi|156564205|ref|YP_001429715.1| nrd beta subunit [Bacillus phage 0305phi8-36]
 gi|154622902|gb|ABS83782.1| nrd beta subunit [Bacillus phage 0305phi8-36]
          Length = 352

 Score = 73.3 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 59/154 (38%), Gaps = 7/154 (4%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           ++   +   N W P E+ M++D  +W   + LT  E+    R     A  +SL    I+ 
Sbjct: 48  YDISQTLEANFWRPVEIKMKEDEKMW---DSLTPIEQDTFLRVGTALACLDSLQVKAILE 104

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
            I R  +N          A +EA H+ ++ YI +SL       + FN   + P +  +  
Sbjct: 105 VI-RFTTNSALANISAFIAQQEATHTTSYSYITSSLVRLPVQNQYFNETMKHPVLAKRNK 163

Query: 161 WALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
             L  Y     +PS     +     I    + F 
Sbjct: 164 LVLDVYEDFAENPSLQNLFRMLVQSINLEGIYFY 197


>gi|238759171|ref|ZP_04620339.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia aldovae
           ATCC 35236]
 gi|238702587|gb|EEP95136.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia aldovae
           ATCC 35236]
          Length = 323

 Score = 73.3 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 57/138 (41%), Gaps = 5/138 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P ++P+ +D+  W +   LT +E+ +  R        
Sbjct: 14  NWNKIEDDKDLEVWNRLTSNFWLPEKIPLSNDIPSWAT---LTPNEQQLTIRVFTGLTLL 70

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYR 150
           +++       A+ +    P         +F EAVH+ ++  I ++L +  D  + +    
Sbjct: 71  DTIQNTLGAPALIKDAITPHEEAVFSNISFMEAVHARSYSSIFSTLCMTSDVDDAYRWSE 130

Query: 151 EVPSITAKANWALQYTQT 168
           E   +  KA+  LQ+   
Sbjct: 131 ENGPLQKKADIILQHYHN 148


>gi|325103985|ref|YP_004273639.1| ribonucleotide reductase [Pedobacter saltans DSM 12145]
 gi|324972833|gb|ADY51817.1| ribonucleotide reductase [Pedobacter saltans DSM 12145]
          Length = 324

 Score = 73.3 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 55/149 (36%), Gaps = 5/149 (3%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
                P +Y    +   +   + W+ +E+    D   + S   L+ +E+  IKR+L   A
Sbjct: 7   RINYKPFEYPEVLDFTNAINKSFWVHSEIDFTADTQDFHS--HLSTNEKESIKRSLLAIA 64

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
             E  V  +    +Y HL  PE        A  E  HS  +  ++  LG +    F    
Sbjct: 65  QIEVNV-KSFWGNLYNHLPKPEFNGLGSTFAECEFRHSEAYSRLLEVLGYNNE--FEKVI 121

Query: 151 EVPSITAKANWALQYTQTLSSPSFHYWNK 179
           E+P I  +  +     +   S     + K
Sbjct: 122 EIPVIKKRIAYLSNALKDTKSDDKKAYIK 150


>gi|309800432|ref|ZP_07694593.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           infantis SK1302]
 gi|308115948|gb|EFO53463.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           infantis SK1302]
          Length = 319

 Score = 73.3 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 9/120 (7%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGVQ 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           A+   +  P        Q F E+VH+ ++  I ++L       E+F      P +  KA 
Sbjct: 76  ALRADIRTPHEEAVYNIQ-FMESVHAKSYSSIFSTLNTKSEIEEIFEWTNTNPYLQKKAE 134


>gi|321309596|ref|YP_004191925.1| ribonucleotide reductase subunit beta [Mycoplasma haemofelis str.
           Langford 1]
 gi|319801440|emb|CBY92086.1| ribonucleotide reductase of class Ib (aerobic), beta subunit
           [Mycoplasma haemofelis str. Langford 1]
          Length = 327

 Score = 73.3 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 50/130 (38%), Gaps = 4/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W+  E+P+  D  +W     LT++E+ + K+ L      ++   +  +  I
Sbjct: 25  FWNQNVRQFWIDEEIPLSGDKLIWA--AELTENEKDVYKKVLVGLTLLDTHQGSLGMTNI 82

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
              + NP     L      E +H+ ++  I ++L   +   ELF    + P +  K    
Sbjct: 83  AMSIDNPHATAVLQFMGMMEQMHAKSYSTIFSTLATSQEIEELFKWSEQNPELQKKMEII 142

Query: 163 LQYTQTLSSP 172
             + + +   
Sbjct: 143 SHHYENIQDD 152


>gi|224283650|ref|ZP_03646972.1| ribonucleotide-diphosphate reductase subunit beta [Bifidobacterium
           bifidum NCIMB 41171]
 gi|310288088|ref|YP_003939347.1| Ribonucleoside-diphosphate reductase beta chain [Bifidobacterium
           bifidum S17]
 gi|313140805|ref|ZP_07802998.1| ribonucleoside-diphosphate reductase subunit beta [Bifidobacterium
           bifidum NCIMB 41171]
 gi|309252025|gb|ADO53773.1| Ribonucleoside-diphosphate reductase beta chain [Bifidobacterium
           bifidum S17]
 gi|313133315|gb|EFR50932.1| ribonucleoside-diphosphate reductase subunit beta [Bifidobacterium
           bifidum NCIMB 41171]
          Length = 330

 Score = 73.3 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 50/126 (39%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W+    ++DDE  +           +++      ++
Sbjct: 32  EVWDRLTGNFWLPEKVPVSNDIPSWQK---MSDDEHTLTMHVFTGLTLLDTIQGTVGAVS 88

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANW 161
           +      P         AF E+VH+ ++  I ++L    +    F+       +  KA  
Sbjct: 89  LIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTKEIDAAFDWSERNEFLQKKAEI 148

Query: 162 ALQYTQ 167
            L Y +
Sbjct: 149 VLDYYE 154


>gi|212712928|ref|ZP_03321056.1| hypothetical protein PROVALCAL_04026 [Providencia alcalifaciens DSM
           30120]
 gi|212684406|gb|EEB43934.1| hypothetical protein PROVALCAL_04026 [Providencia alcalifaciens DSM
           30120]
          Length = 323

 Score = 73.3 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 53/136 (38%), Gaps = 5/136 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P ++P+ +D   W   N L  DE+ +  R        
Sbjct: 14  NWNRIQDDKDLEVWNRLTSNFWLPEKIPLSNDTVSW---NTLKTDEQQLTIRVFTGLTLL 70

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++        +      P     L   +F EAVH+ ++  I ++L   +D  E +    
Sbjct: 71  DTIQNTVGAPCLMEDAQTPHEEAVLSNISFMEAVHARSYSSIFSTLCSTVDVDEAYRWSE 130

Query: 151 EVPSITAKANWALQYT 166
           E  ++  KA   L Y 
Sbjct: 131 ENTALQNKAKIILSYY 146


>gi|54026269|ref|YP_120511.1| ribonucleotide-diphosphate reductase subunit beta [Nocardia
           farcinica IFM 10152]
 gi|54017777|dbj|BAD59147.1| putative ribonucleoside-diphosphate reductase beta subunit
           [Nocardia farcinica IFM 10152]
          Length = 320

 Score = 73.3 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 53/126 (42%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W   N LT  E+ +  R        +++      ++
Sbjct: 22  EVWARLTGNFWLPEKVPVSNDIPSW---NTLTPHEQQLTMRVFTGLTLLDTIQGTVGAVS 78

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANW 161
           +      P     L   AF E+VH+ ++  I ++L    +  E F    E  ++  KA  
Sbjct: 79  LIPDALTPHEEAVLTNIAFMESVHAKSYSSIFSTLCSTKEIDEAFRWSEENRNLQRKAEI 138

Query: 162 ALQYTQ 167
            L Y Q
Sbjct: 139 VLDYYQ 144


>gi|257069608|ref|YP_003155863.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Brachybacterium faecium DSM 4810]
 gi|256560426|gb|ACU86273.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Brachybacterium faecium DSM 4810]
          Length = 322

 Score = 73.3 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 54/156 (34%), Gaps = 6/156 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +     N W+P ++P+ +D+  W  +   +++E+ M           
Sbjct: 13  NWNRIPDPKDQEVWDRLTGNFWLPEKIPLSNDIQSWSRR---SEEEQKMAMHVFTGLTLL 69

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYR 150
           +++      +++      P         AF E+VH+ ++  I ++L   +   E F+   
Sbjct: 70  DTVQGTVGAISLIPDAVTPHEEAVYTNIAFMESVHAKSYSQIFSTLANTKQIDEAFHWGA 129

Query: 151 EVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRIL 186
               +  KA   + Y +    P             L
Sbjct: 130 TNEQLQKKAQIIMSYYEG-DDPEKRKVASVLLESFL 164


>gi|52080345|ref|YP_079136.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           licheniformis ATCC 14580]
 gi|52785724|ref|YP_091553.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           licheniformis ATCC 14580]
 gi|319645870|ref|ZP_08000100.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus sp.
           BT1B_CT2]
 gi|52003556|gb|AAU23498.1| ribonucleoside-diphosphate reductase (minor subunit) [Bacillus
           licheniformis ATCC 14580]
 gi|52348226|gb|AAU40860.1| NrdF [Bacillus licheniformis ATCC 14580]
 gi|317391620|gb|EFV72417.1| ribonucleoside-diphosphate reductase subunit beta [Bacillus sp.
           BT1B_CT2]
          Length = 325

 Score = 73.3 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 54/152 (35%), Gaps = 6/152 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            Y       W+P E+ +  DL  WK    L  +E+    + L      ++   N  +  +
Sbjct: 21  FYNQNVKQFWLPEEIALNGDLLTWK---YLGKNEQDTYMKVLAGLTLLDTEQGNTGMPLV 77

Query: 105 YRHLSNPECRQYLLRQAFEEA-VHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
             H+   + +  L   A  E  VH+ ++  I  +L   E   E+F   ++   +  KA  
Sbjct: 78  AEHVEGHQRKAVLNFMAMMENAVHAKSYSNIFMTLAPTETINEVFEWVKQNKYLQKKAQI 137

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            +   + +         K   + +   S  F 
Sbjct: 138 IVGLYEKIRQGDKISLFKAMVASVYLESFLFY 169


>gi|308806626|ref|XP_003080624.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
           tauri]
 gi|116059085|emb|CAL54792.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
           tauri]
          Length = 241

 Score = 73.0 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 16/70 (22%)

Query: 128 SHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSR 184
           +  +  +I     D  E   LF     +P +  KA+WAL++  +  S             
Sbjct: 23  AEMYSLLIDQYVKDPAEKSHLFRAIETIPCVKKKADWALKWIDSSDS------------- 69

Query: 185 ILTRSLRFLC 194
              R L F C
Sbjct: 70  FAERLLAFAC 79


>gi|28377561|ref|NP_784453.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           plantarum WCFS1]
 gi|254555734|ref|YP_003062151.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           plantarum JDM1]
 gi|300769755|ref|ZP_07079637.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           plantarum subsp. plantarum ATCC 14917]
 gi|308179714|ref|YP_003923842.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           plantarum subsp. plantarum ST-III]
 gi|28270393|emb|CAD63296.1| ribonucleoside-diphosphate reductase, beta chain [Lactobacillus
           plantarum WCFS1]
 gi|254044661|gb|ACT61454.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           plantarum JDM1]
 gi|300492663|gb|EFK27849.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           plantarum subsp. plantarum ATCC 14917]
 gi|308045205|gb|ADN97748.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           plantarum subsp. plantarum ST-III]
          Length = 336

 Score = 73.0 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 60/136 (44%), Gaps = 10/136 (7%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +D+A W+    L DD R ++    G     ++L + + + 
Sbjct: 34  WEKLTEQ---FWLDTRIPVSNDMADWRE---LDDDHRWVVGHVFGGLTLLDTLQSQDGLQ 87

Query: 103 AIYRHL-SNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKA 159
           A+ R++ ++ E       Q F E+VH+ ++  I  +L   +   E+F+       + AKA
Sbjct: 88  ALRRNVLTSHETAVLNNIQ-FMESVHAKSYSTIFETLNTPDEINEIFDWSDSEEFLQAKA 146

Query: 160 NWALQYTQTLSSPSFH 175
            W  +    +      
Sbjct: 147 QWIYKLYDNIDEDPLK 162


>gi|256422447|ref|YP_003123100.1| ribonucleotide reductase [Chitinophaga pinensis DSM 2588]
 gi|256037355|gb|ACU60899.1| ribonucleotide reductase [Chitinophaga pinensis DSM 2588]
          Length = 324

 Score = 73.0 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 50/148 (33%), Gaps = 5/148 (3%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
             Q  P +Y    +   +   + W+  EV    D   + S   L   ER  ++ +L   A
Sbjct: 7   RLQYKPFEYPEVLQFTEAINKSFWVHAEVDFTADTQDFHS--HLNPAERTAVRNSLLAIA 64

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
             E  V  +    +Y HL  PE        A  E  HS  +  ++  LG +    F    
Sbjct: 65  QIEVAV-KSFWGNLYNHLPKPEMNGLGSTFAECEFRHSEAYSRLVEVLGYNSQ--FEKLV 121

Query: 151 EVPSITAKANWALQYTQTLSSPSFHYWN 178
           EVP I  +  +         S     + 
Sbjct: 122 EVPVIRQRIEYLSDALSNAKSTDTREYT 149


>gi|213965886|ref|ZP_03394077.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           amycolatum SK46]
 gi|213951464|gb|EEB62855.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           amycolatum SK46]
          Length = 338

 Score = 73.0 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 52/151 (34%), Gaps = 5/151 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W + N L   E+    R        +++      ++
Sbjct: 40  EVWDRLTGNFWLPEKVPLSNDIKSWNTLNAL---EQRTTMRVFTGLTMLDTIQGTVGAVS 96

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG--ELFNMYREVPSITAKANW 161
           +      P         AF E+VH+ ++  I  +L       + F    E   +  KA  
Sbjct: 97  LIPDALTPHEEAVYTNIAFMESVHAKSYSSIFQTLASTPEIQDAFRWGEENEYLQKKAKI 156

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
            L Y +  +       +    S +       
Sbjct: 157 ILDYYEGDNPQKKKVASTLLESFLFYSGFYL 187


>gi|92112513|ref|YP_572441.1| ribonucleotide-diphosphate reductase subunit beta [Chromohalobacter
           salexigens DSM 3043]
 gi|91795603|gb|ABE57742.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Chromohalobacter salexigens DSM 3043]
          Length = 326

 Score = 73.0 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 7/139 (5%)

Query: 28  RSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLG 87
           R D      L+     E +     N W+P +VP+ +D++ W   N LT+ E+ +  R   
Sbjct: 12  RVDAINWNRLQDEKDLEVWNRLTANFWLPEKVPLSNDVSAW---NTLTEQEQTLTIRVFT 68

Query: 88  FFASSESLVAN-NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGE 144
                +++         I   ++  E   +    +F E+VH+ ++  I ++L    D  +
Sbjct: 69  GLTLLDTIQGTIGAPTLIEDAVTPHEEAVFTNI-SFMESVHARSYSSIFSTLCATRDVDD 127

Query: 145 LFNMYREVPSITAKANWAL 163
            +    E P +  KA   L
Sbjct: 128 AYRWSEENPHLQNKAELIL 146


>gi|238790129|ref|ZP_04633906.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           frederiksenii ATCC 33641]
 gi|238721798|gb|EEQ13461.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia
           frederiksenii ATCC 33641]
          Length = 323

 Score = 73.0 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 55/138 (39%), Gaps = 5/138 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +     N W+P +VP+ +D+  W +   L  +E+ +  R        
Sbjct: 14  NWNKIEDDKDLEVWNRLTANFWLPEKVPLSNDIPSWAT---LAPNEQQLTIRVFTGLTLL 70

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYR 150
           +++       A+ +    P         +F EAVH+ ++  I ++L +  D  + +    
Sbjct: 71  DTIQNTLGAPALIKDAITPHEEAVFSNISFMEAVHARSYSSIFSTLCMTSDVDDAYRWSE 130

Query: 151 EVPSITAKANWALQYTQT 168
           E   +  KA+  LQ+   
Sbjct: 131 ENGPLQKKADIILQHYHN 148


>gi|168238723|ref|ZP_02663781.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|194737146|ref|YP_002115764.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|194712648|gb|ACF91869.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|197288484|gb|EDY27861.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
          Length = 319

 Score = 73.0 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 54/133 (40%), Gaps = 5/133 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKIQDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSAAEQQLTIRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++       ++      P     L   +F EAVH+ ++  I ++L    +    +    
Sbjct: 67  DTIQNIAGAPSLMADAITPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKEVDAAYAWSE 126

Query: 151 EVPSITAKANWAL 163
           E P++  KA   L
Sbjct: 127 ENPTLQRKAQIIL 139


>gi|311064961|ref|YP_003971687.1| ribonucleoside-diphosphate reductase subunit beta NrdF
           [Bifidobacterium bifidum PRL2010]
 gi|310867281|gb|ADP36650.1| NrdF Ribonucleoside-diphosphate reductase beta chain
           [Bifidobacterium bifidum PRL2010]
          Length = 330

 Score = 73.0 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 50/126 (39%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W+    ++DDE  +           +++      ++
Sbjct: 32  EVWDRLTGNFWLPEKVPVSNDIPSWQK---MSDDEHTLTMHVFTGLTLLDTIQGTVGAVS 88

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANW 161
           +      P         AF E+VH+ ++  I ++L    +    F+       +  KA  
Sbjct: 89  LIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTKEIDTAFDWSERNEFLQKKAEI 148

Query: 162 ALQYTQ 167
            L Y +
Sbjct: 149 VLDYYE 154


>gi|169827410|ref|YP_001697568.1| ribonucleoside-diphosphate reductase subunit beta [Lysinibacillus
           sphaericus C3-41]
 gi|168991898|gb|ACA39438.1| Ribonucleoside-diphosphate reductase subunit beta [Lysinibacillus
           sphaericus C3-41]
          Length = 318

 Score = 73.0 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 7/154 (4%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
           A   +       W P E+ +  D+  WKS        +   K+        +++  N  +
Sbjct: 15  AQIFWDQQWKQIWFPEEIAVSKDIQQWKSFEH-----QDTYKKVFAGLTLLDTVQTNIGM 69

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKA 159
             +  +  + + +  L      EA+H+ ++ YI T+L  +E   ELF   ++   +  KA
Sbjct: 70  NRVAAYTDDLQEKAVLTVFDAFEAIHAKSYSYIFTTLCTNEEIDELFEWVKKNEYLQYKA 129

Query: 160 NWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           N       ++         K   S ++  S  F 
Sbjct: 130 NKIADIYNSIEEGDAESLWKAMFSSVMLESFLFY 163


>gi|213419183|ref|ZP_03352249.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
          Length = 305

 Score = 73.0 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 53/133 (39%), Gaps = 5/133 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKIQDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSAAEQQLTIRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++       ++      P     L   +F EAVH+ ++  I ++L    +    +    
Sbjct: 67  DTIQNIAGAPSLMADAITPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKEVDAAYAWSE 126

Query: 151 EVPSITAKANWAL 163
           E P +  KA   L
Sbjct: 127 ENPPLQRKAQIIL 139


>gi|146312797|ref|YP_001177871.1| ribonucleotide-diphosphate reductase subunit beta [Enterobacter sp.
           638]
 gi|145319673|gb|ABP61820.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Enterobacter sp. 638]
          Length = 319

 Score = 73.0 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 56/138 (40%), Gaps = 5/138 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKIQDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSHAEQQLTIRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++  +    A+      P     +   +F EAVH+ ++  I ++L    D    ++   
Sbjct: 67  DTIQNSVGAPALMGDSLTPHEEAVMSNISFMEAVHARSYSSIFSTLCQTKDVDAAYSWSE 126

Query: 151 EVPSITAKANWALQYTQT 168
              S+  KA   L+Y   
Sbjct: 127 ASTSLQRKAQLVLEYYHA 144


>gi|254471227|ref|ZP_05084629.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudovibrio
           sp. JE062]
 gi|211959373|gb|EEA94571.1| ribonucleoside-diphosphate reductase, beta subunit [Pseudovibrio
           sp. JE062]
          Length = 325

 Score = 73.0 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 57/145 (39%), Gaps = 5/145 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +    +N W+P +VP+ +D+  W S   LT +E+ +  R        +++       A
Sbjct: 26  EIWNRLTSNFWLPEKVPLSNDVQSWAS---LTPEEQQLTIRVFTGLTLLDTIQNTVGAPA 82

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYREVPSITAKANW 161
           +      P     L   AF EAVH+ ++  + ++L    +  + F    E   + AK+  
Sbjct: 83  LMADAVTPHEEAVLTNIAFMEAVHARSYSSVFSTLCRTAEVDDAFRWSEENEFLQAKSRL 142

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRIL 186
            L+     SSP             L
Sbjct: 143 ILEEYNATSSPLKKKIASVFLESFL 167


>gi|13095637|ref|NP_076552.1| ribonucleotide reductase small subunit [Bovine herpesvirus 4]
 gi|12802587|gb|AAK07979.1|AF318573_59 ribonucleotide reductase small subunit [Bovine herpesvirus 4]
          Length = 305

 Score = 73.0 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 59/147 (40%), Gaps = 13/147 (8%)

Query: 51  NNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSN 110
            N W P++V +  D+   KS   L   +R   K    F   +ESLV  NI   I +   +
Sbjct: 25  QNRWFPSQVSLHGDVNHLKS---LNVQDREFYKFLFTFLGMAESLVNFNI-EDIIKQFES 80

Query: 111 PECRQYLLRQAFEEAVHSHTFQYIITSLG-LDEGELFN---MYREVPSITAKANWALQYT 166
            +   Y   Q   E +H+  ++ I+      D  E++    M     ++  K +W     
Sbjct: 81  HDMLHYYTEQMAMENIHARMYENILNMFFNNDPAEMYRYTQMIINDRALIRKLDWLHSRI 140

Query: 167 QTLSSPSFHYWNKRRRSRILTRSLRFL 193
           +++S+       ++    +L   + F+
Sbjct: 141 KSVSN-----KAEKVLLFLLVEGIFFV 162


>gi|260599071|ref|YP_003211642.1| ribonucleotide-diphosphate reductase subunit beta [Cronobacter
           turicensis z3032]
 gi|260218248|emb|CBA33173.1| Ribonucleoside-diphosphate reductase 2 subunit beta [Cronobacter
           turicensis z3032]
          Length = 320

 Score = 73.0 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 54/138 (39%), Gaps = 5/138 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               L+     E +    +N W+P +VP+ +D+  W++   LT  E+ +  R        
Sbjct: 11  NWNKLQDEKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LTPGEQQLTIRVFTGLTLL 67

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++       A+      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 68  DTIQNAVGAPALMADALTPHEEAVLSNVSFMEAVHARSYSSIFSTLCQTPDVDAAYAWSE 127

Query: 151 EVPSITAKANWALQYTQT 168
           E   +  KA   L + + 
Sbjct: 128 ENAPLQRKAQIILAHYRD 145


>gi|227833933|ref|YP_002835640.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           aurimucosum ATCC 700975]
 gi|262184936|ref|ZP_06044357.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           aurimucosum ATCC 700975]
 gi|227454949|gb|ACP33702.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 329

 Score = 72.6 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 51/126 (40%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  WK+   LT+ E+    R        +++      ++
Sbjct: 31  EVWDRLTGNFWLPEKVPVSNDIPSWKT---LTEKEQETTMRVFAGLTLLDTIQGTVGAVS 87

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +      P         AF E+VH+ ++  I  +L       + F    E  ++  KA  
Sbjct: 88  LLPDAVTPHEEAVYTNIAFMESVHAKSYSNIFMTLASTPMINDAFRWSEENENLQRKAKI 147

Query: 162 ALQYTQ 167
            + Y Q
Sbjct: 148 VMSYYQ 153


>gi|227833759|ref|YP_002835466.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           aurimucosum ATCC 700975]
 gi|262184833|ref|ZP_06044254.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           aurimucosum ATCC 700975]
 gi|227454775|gb|ACP33528.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 328

 Score = 72.6 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 62/169 (36%), Gaps = 5/169 (2%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           D      +      + +    +N W+P +VP+ +D+  WK    + + E+    +     
Sbjct: 16  DPINWNEITDQVDKDVWDRLTSNFWLPEKVPVSNDIPTWK---IMDEAEQWATMQVFTGL 72

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFN 147
              +++      L+I    + P         AF E+VH+ ++  I  +L         FN
Sbjct: 73  TMLDTMQGTVGALSILPDAATPHEEAVYTNIAFMESVHAKSYSNIFMTLADTPTINHAFN 132

Query: 148 MYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLCRV 196
             R+   +  KA+  L + +  +SP     +    S +         R+
Sbjct: 133 WGRQSERLQYKAHRVLDFYKRGNSPMRKAASTLLESFLFYSGFYLPLRM 181


>gi|68068657|ref|XP_676239.1| ribonucleotide reductase small subunit [Plasmodium berghei strain
           ANKA]
 gi|56495842|emb|CAH97095.1| ribonucleotide reductase small subunit, putative [Plasmodium
           berghei]
          Length = 299

 Score = 72.6 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 52/147 (35%), Gaps = 12/147 (8%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
            + P+KY   W  Y    +  W   +     D      K  L   +++ + + L      
Sbjct: 1   VMFPIKYKTFWNYYKE-ESLFWTAEDHNFDKD------KPFLNSMDKITLSKLLELLYLH 53

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD---EGELFNMY 149
                  I   +   +  PE R +   Q   E +H+  +  I  S   D   + E+ +  
Sbjct: 54  LCDEQAIITSKLLDIIQIPEGRAFYGFQMCMENIHNEVYACIFESYSSDSKQKKEIIDKV 113

Query: 150 REVPSITAKANWALQYTQTLSSPSFHY 176
            +  S+  K NW   Y++  ++  F+ 
Sbjct: 114 LKYESVFKKQNWL--YSEFEANIPFYN 138


>gi|157148214|ref|YP_001455533.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter
           koseri ATCC BAA-895]
 gi|157085419|gb|ABV15097.1| hypothetical protein CKO_04025 [Citrobacter koseri ATCC BAA-895]
          Length = 319

 Score = 72.6 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 54/134 (40%), Gaps = 5/134 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKIQDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSAAEQQLTIRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++       A+ +    P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTIQNIAGAPALMQDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQ 164
           E   +  KA   LQ
Sbjct: 127 ENAPLQRKAQIILQ 140


>gi|156932794|ref|YP_001436710.1| ribonucleotide-diphosphate reductase subunit beta [Cronobacter
           sakazakii ATCC BAA-894]
 gi|156531048|gb|ABU75874.1| hypothetical protein ESA_00590 [Cronobacter sakazakii ATCC BAA-894]
          Length = 320

 Score = 72.6 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 54/138 (39%), Gaps = 5/138 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               L+     E +    +N W+P +VP+ +D+  W++   LT  E+ +  R        
Sbjct: 11  NWNKLQDEKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LTPGEQQLTIRVFTGLTLL 67

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++       A+      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 68  DTIQNAVGAPALMADALTPHEEAVLSNVSFMEAVHARSYSSIFSTLCQTPDVDAAYAWSE 127

Query: 151 EVPSITAKANWALQYTQT 168
           E   +  KA   L + + 
Sbjct: 128 ENAPLQRKAQIILAHYRD 145


>gi|296316020|ref|YP_003662484.1| ribonucleotide reductase subunit 2 [Bovine herpesvirus 5]
 gi|40456143|gb|AAR86121.1| UL40 ribonucleotide reductase small subunit [Bovine herpesvirus 5]
          Length = 315

 Score = 72.6 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 48/136 (35%), Gaps = 8/136 (5%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                    +  N W+ TE P+ DD         L+  E    +    F ++++ LV  N
Sbjct: 23  PDIDHLRSLSVANRWLETEFPLADDAKD---VARLSGAELEFYRFLFAFLSAADDLVNVN 79

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYRE----VPSI 155
           +   +    +  +   Y + Q   E VHS  +  I   L  ++      Y E     P++
Sbjct: 80  LG-NLSELFTQKDILHYYIEQESIEVVHSRVYSAIQLLLFKNDAVARAGYVEDALSDPAV 138

Query: 156 TAKANWALQYTQTLSS 171
             K +W  +      S
Sbjct: 139 RRKVDWLERRVAAAES 154


>gi|323127635|gb|ADX24932.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           dysgalactiae subsp. equisimilis ATCC 12394]
          Length = 319

 Score = 72.6 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 59/133 (44%), Gaps = 8/133 (6%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           + N++  +     WEK        W+ T +P+ +DL  W+    L+D E+ ++ +  G  
Sbjct: 9   NWNEIEDVIDKSTWEKLTEQ---FWLDTRIPLSNDLDDWRK---LSDIEKDLVGKVFGGL 62

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFN 147
              +++ + + V AI + +  P     L    F E+VH+ ++  I ++L   +   E+F 
Sbjct: 63  TLLDTMQSESGVEAIRQDVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKKEIEEIFE 122

Query: 148 MYREVPSITAKAN 160
                  +  KA 
Sbjct: 123 WTNNNEFLQKKAQ 135


>gi|251782830|ref|YP_002997133.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
 gi|242391460|dbj|BAH81919.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
          Length = 319

 Score = 72.6 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 59/133 (44%), Gaps = 8/133 (6%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           + N++  +     WEK        W+ T +P+ +DL  W+    L+D E+ ++ +  G  
Sbjct: 9   NWNEIEDVIDKSTWEKLTEQ---FWLDTRIPLSNDLDDWRK---LSDIEKDLVGKVFGGL 62

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFN 147
              +++ + + V AI + +  P     L    F E+VH+ ++  I ++L   +   E+F 
Sbjct: 63  TLLDTMQSESGVEAIRQDVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKKEIEEIFE 122

Query: 148 MYREVPSITAKAN 160
                  +  KA 
Sbjct: 123 WTNNNEFLQKKAQ 135


>gi|168262084|ref|ZP_02684057.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|205349275|gb|EDZ35906.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
          Length = 319

 Score = 72.2 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 53/133 (39%), Gaps = 5/133 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKIQDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSAAEQQLTIRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++       ++      P     L   +F EAVH+ ++  I ++L    +    +    
Sbjct: 67  DTIQNIAGAPSLMADAITPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKEVDAAYAWSE 126

Query: 151 EVPSITAKANWAL 163
           E P +  KA   L
Sbjct: 127 ENPPLQRKAQIIL 139


>gi|227112968|ref|ZP_03826624.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 320

 Score = 72.2 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 57/139 (41%), Gaps = 7/139 (5%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +D+  W   + L   ER +  R        
Sbjct: 11  NWNKIEDDKDLEVWNRLTSNFWLPEKVPLSNDIPSW---STLNARERQLTIRVFTGLTLL 67

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY--- 149
           +++        +      P     L   +F EAVH+ ++  I ++L L   E+ + Y   
Sbjct: 68  DTIQNTLGAPTLMPDAVTPHEEAVLSNISFMEAVHARSYSSIFSTLCL-TSEVDDAYRWS 126

Query: 150 REVPSITAKANWALQYTQT 168
            E  ++  K++  L + ++
Sbjct: 127 EENTALQKKSDIILSHYRS 145


>gi|227329868|ref|ZP_03833892.1| ribonucleotide-diphosphate reductase subunit beta [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
          Length = 320

 Score = 72.2 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 56/139 (40%), Gaps = 7/139 (5%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +D+  W     L   ER +  R        
Sbjct: 11  NWNKIEDDKDLEVWNRLTSNFWLPEKVPLSNDIPSW---GTLNARERQLTIRVFTGLTLL 67

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY--- 149
           +++        +      P     L   +F EAVH+ ++  I ++L L   E+ + Y   
Sbjct: 68  DTIQNTLGAPTLMPDAVTPHEEAVLSNISFMEAVHARSYSSIFSTLCL-TSEVDDAYRWS 126

Query: 150 REVPSITAKANWALQYTQT 168
            E  ++  K++  L + ++
Sbjct: 127 EENTALQKKSDIILSHYRS 145


>gi|224584592|ref|YP_002638390.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
 gi|224469119|gb|ACN46949.1| ribonucleotide-diphosphate reductase beta subunit [Salmonella
           enterica subsp. enterica serovar Paratyphi C strain
           RKS4594]
          Length = 319

 Score = 72.2 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 53/133 (39%), Gaps = 5/133 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKIQDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSAAEQQLTIRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++       ++      P     L   +F EAVH+ ++  I ++L    +    +    
Sbjct: 67  DTIQNIAGAPSLMADAITPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKEVDAAYAWSE 126

Query: 151 EVPSITAKANWAL 163
           E P +  KA   L
Sbjct: 127 ENPPLQRKAQIIL 139


>gi|16761590|ref|NP_457207.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. CT18]
 gi|29143070|ref|NP_806412.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
 gi|213052490|ref|ZP_03345368.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213424576|ref|ZP_03357365.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E02-1180]
 gi|213584527|ref|ZP_03366353.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-0664]
 gi|213650063|ref|ZP_03380116.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. J185]
 gi|289824437|ref|ZP_06544026.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
 gi|25330821|pir||AH0841 ribonucleoside-diphosphate reductase (EC 1.17.4.1) - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16503891|emb|CAD05919.1| ribonucleoside-diphosphate reductase 2 beta chain [Salmonella
           enterica subsp. enterica serovar Typhi]
 gi|29138703|gb|AAO70272.1| ribonucleoside-diphosphate reductase 2 beta chain [Salmonella
           enterica subsp. enterica serovar Typhi str. Ty2]
          Length = 319

 Score = 72.2 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 53/133 (39%), Gaps = 5/133 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKIQDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSAAEQQLTIRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++       ++      P     L   +F EAVH+ ++  I ++L    +    +    
Sbjct: 67  DTIQNIAGAPSLMADAITPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKEVDAAYAWSE 126

Query: 151 EVPSITAKANWAL 163
           E P +  KA   L
Sbjct: 127 ENPPLQRKAQIIL 139


>gi|308173699|ref|YP_003920404.1| ribonucleoside-diphosphate reductase minor subunit [Bacillus
           amyloliquefaciens DSM 7]
 gi|307606563|emb|CBI42934.1| ribonucleoside-diphosphate reductase (minor subunit) [Bacillus
           amyloliquefaciens DSM 7]
 gi|328553367|gb|AEB23859.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           amyloliquefaciens TA208]
 gi|328911843|gb|AEB63439.1| ribonucleoside-diphosphate reductase (minor subunit) [Bacillus
           amyloliquefaciens LL3]
          Length = 329

 Score = 72.2 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 55/152 (36%), Gaps = 6/152 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            Y       W+P E+ +  DL  WK    L  +E+    + L      ++   N  +  +
Sbjct: 21  FYNQNVKQFWLPEEIALNGDLLTWK---YLGKNEQDTYMKVLAGLTLLDTEQGNTGMPIV 77

Query: 105 YRHLSNPECRQYLLRQAFEEA-VHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
             H+   + +  L   A  E  VH+ ++  I  +L   E   E+F   ++   +  KA+ 
Sbjct: 78  AEHVEGHQRKAVLNFMAMMENAVHAKSYSNIFMTLAPTETINEVFEWVKQNKYLQKKAHT 137

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            +   + +         K   + +   S  F 
Sbjct: 138 VVGLYRAIKKDDEISLFKAMVASVYLESFLFY 169


>gi|213864815|ref|ZP_03386934.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. M223]
          Length = 170

 Score = 72.2 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 53/133 (39%), Gaps = 5/133 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKIQDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSAAEQQLTIRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++       ++      P     L   +F EAVH+ ++  I ++L    +    +    
Sbjct: 67  DTIQNIAGAPSLMADAITPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKEVDAAYAWSE 126

Query: 151 EVPSITAKANWAL 163
           E P +  KA   L
Sbjct: 127 ENPPLQRKAQIIL 139


>gi|62181312|ref|YP_217729.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|161615703|ref|YP_001589668.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Paratyphi B str. SPB7]
 gi|167552693|ref|ZP_02346445.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|168822877|ref|ZP_02834877.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|197265553|ref|ZP_03165627.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|205353758|ref|YP_002227559.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|207858077|ref|YP_002244728.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|62128945|gb|AAX66648.1| ribonucleoside-diphosphate reductase 2, beta subunit [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|161365067|gb|ABX68835.1| hypothetical protein SPAB_03488 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|197243808|gb|EDY26428.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|205273539|emb|CAR38525.1| ribonucleoside-diphosphate reductase 2 beta chain [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|205322691|gb|EDZ10530.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|205340791|gb|EDZ27555.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|206709880|emb|CAR34233.1| ribonucleoside-diphosphate reductase 2 beta chain [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|320087214|emb|CBY96980.1| ribonucleoside-diphosphate reductase beta chain [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           2007-60-3289-1]
 gi|322715798|gb|EFZ07369.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Choleraesuis str. A50]
 gi|326628866|gb|EGE35209.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 9]
          Length = 319

 Score = 72.2 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 53/133 (39%), Gaps = 5/133 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKIQDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSAAEQQLTIRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++       ++      P     L   +F EAVH+ ++  I ++L    +    +    
Sbjct: 67  DTIQNIAGAPSLMADAITPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKEVDAAYAWSE 126

Query: 151 EVPSITAKANWAL 163
           E P +  KA   L
Sbjct: 127 ENPPLQRKAQIIL 139


>gi|319441868|ref|ZP_07991024.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           variabile DSM 44702]
          Length = 332

 Score = 72.2 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 49/126 (38%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W     L++ E+    R        +++       +
Sbjct: 34  EVWDRLTGNFWLPEKVPLSNDIKSW---GTLSEAEQTATMRVFTGLTMLDTIQGTVGATS 90

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +      P         AF E+VH+ ++  I  +L       + F    E  ++  KA+ 
Sbjct: 91  LIDDAVTPHEEAVFTNIAFMESVHAKSYSSIFMTLASTPQINDAFRWSEENENLQTKADI 150

Query: 162 ALQYTQ 167
            L + Q
Sbjct: 151 VLNFYQ 156


>gi|125745092|ref|YP_001033969.1| ribonucleotide reductase subunit 2 [Gallid herpesvirus 2]
 gi|327488446|sp|Q77MS0|RIR2_GAHVM RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|7673151|gb|AAF66775.1|AF147806_39 ribonucleotide reductase small subunit [Gallid herpesvirus 2]
 gi|10180745|gb|AAG14233.1|AF243438_48 UL40 ribonucleotide reductase small subunit-like protein [Gallid
           herpesvirus 2]
 gi|104304005|gb|ABF72280.1| HSV-1 UL40-like protein [Gallid herpesvirus 2]
 gi|148806369|gb|ABR13125.1| UL40 [Gallid herpesvirus 2]
 gi|194346388|gb|ACF49570.1| UL40 [synthetic construct]
 gi|194750382|gb|ACF94859.1| UL40 [Gallid herpesvirus 2]
 gi|237626230|gb|ACR02753.1| UL40 [synthetic construct]
 gi|237626404|gb|ACR02926.1| UL40 [synthetic construct]
          Length = 343

 Score = 72.2 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 49/129 (37%), Gaps = 8/129 (6%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                    +  N W  TE  + DDL      + LT++ER   +    F ++++ LV  N
Sbjct: 51  PDIGHLRALSIMNRWTETEFVISDDLRD---VSMLTEEERYFYRFLFTFLSAADDLVNLN 107

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ----YIITSLGLDEGELFNMYREVPSI 155
           I   +    S  +   Y   Q   EAVHS  +      +  +  L   E        P+I
Sbjct: 108 I-DNLLGLFSQKDIHHYYFEQECIEAVHSRAYSIIQLMLFDNDSLARAEYVKTSLNSPAI 166

Query: 156 TAKANWALQ 164
            +K +W  +
Sbjct: 167 QSKLDWLNK 175


>gi|41387638|gb|AAS01682.1| ribonucleotide reductase small subunit [Gallid herpesvirus 2]
          Length = 343

 Score = 72.2 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 49/129 (37%), Gaps = 8/129 (6%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                    +  N W  TE  + DDL      + LT++ER   +    F ++++ LV  N
Sbjct: 51  PDIGHLRALSIMNRWTETEFVISDDLRD---VSMLTEEERYFYRFLFTFLSAADDLVNLN 107

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ----YIITSLGLDEGELFNMYREVPSI 155
           I   +    S  +   Y   Q   EAVHS  +      +  +  L   E        P+I
Sbjct: 108 I-DNLLGLFSQKDIHHYYFEQECIEAVHSRAYSIIQLMLFDNDSLARAEYVKTSLNSPAI 166

Query: 156 TAKANWALQ 164
            +K +W  +
Sbjct: 167 QSKLDWLNK 175


>gi|16766119|ref|NP_461734.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|167992529|ref|ZP_02573627.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|168233769|ref|ZP_02658827.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|194469894|ref|ZP_03075878.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|197251114|ref|YP_002147708.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|204929699|ref|ZP_03220773.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|238909579|ref|ZP_04653416.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Tennessee str.
           CDC07-0191]
 gi|585861|sp|P17424|RIR4_SALTY RecName: Full=Ribonucleoside-diphosphate reductase 2 subunit beta;
           AltName: Full=R2F protein; AltName: Full=Ribonucleotide
           reductase 2
 gi|4389108|pdb|2R2F|A Chain A, Ribonucleotide Reductase R2f Protein From Salmonella
           Typhimurium (Oxidized)
 gi|4389109|pdb|2R2F|B Chain B, Ribonucleotide Reductase R2f Protein From Salmonella
           Typhimurium (Oxidized)
 gi|4389155|pdb|1R2F|A Chain A, Ribonucleotide Reductase R2f Protein From Salmonella
           Typhimurium
 gi|4389156|pdb|1R2F|B Chain B, Ribonucleotide Reductase R2f Protein From Salmonella
           Typhimurium
 gi|109157246|pdb|2BQ1|I Chain I, Ribonucleotide Reductase Class 1b Holocomplex R1e,R2f From
           Salmonella Typhimurium
 gi|109157247|pdb|2BQ1|J Chain J, Ribonucleotide Reductase Class 1b Holocomplex R1e,R2f From
           Salmonella Typhimurium
 gi|311979|emb|CAA51695.1| ribonucleoside-diphosphate reductase [Salmonella enterica subsp.
           enterica serovar Typhimurium]
 gi|16421357|gb|AAL21693.1| ribonucleoside-diphosphate reductase 2, beta subunit [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|194456258|gb|EDX45097.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|197214817|gb|ACH52214.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|204321418|gb|EDZ06618.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|205329263|gb|EDZ16027.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|205332191|gb|EDZ18955.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|261247949|emb|CBG25782.1| ribonucleoside-diphosphate reductase 2 beta chain [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           D23580]
 gi|267994924|gb|ACY89809.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           14028S]
 gi|301159373|emb|CBW18891.1| ribonucleoside-diphosphate reductase 2 beta chain [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           SL1344]
 gi|312913831|dbj|BAJ37805.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           T000240]
 gi|321223605|gb|EFX48670.1| Ribonucleotide reductase of class Ib aerobic, beta subunit
           [Salmonella enterica subsp. enterica serovar Typhimurium
           str. TN061786]
 gi|323131164|gb|ADX18594.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhimurium str. 4/74]
          Length = 319

 Score = 72.2 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 53/133 (39%), Gaps = 5/133 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKIQDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSAAEQQLTIRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++       ++      P     L   +F EAVH+ ++  I ++L    +    +    
Sbjct: 67  DTIQNIAGAPSLMADAITPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKEVDAAYAWSE 126

Query: 151 EVPSITAKANWAL 163
           E P +  KA   L
Sbjct: 127 ENPPLQRKAQIIL 139


>gi|168244605|ref|ZP_02669537.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|168464072|ref|ZP_02697989.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|194442875|ref|YP_002042053.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194450827|ref|YP_002046771.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194401538|gb|ACF61760.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194409131|gb|ACF69350.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|195633109|gb|EDX51523.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|205336532|gb|EDZ23296.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
          Length = 319

 Score = 72.2 bits (176), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 53/133 (39%), Gaps = 5/133 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKIQDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSAAEQQLTIRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++       ++      P     L   +F EAVH+ ++  I ++L    +    +    
Sbjct: 67  DTIQNIAGAPSLMADAITPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKEVDAAYAWSE 126

Query: 151 EVPSITAKANWAL 163
           E P +  KA   L
Sbjct: 127 ENPPLQRKAQIIL 139


>gi|116253995|ref|YP_769833.1| ribonucleotide-diphosphate reductase subunit beta [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115258643|emb|CAK09747.1| putative ribonucleoside-diphosphate reductase beta subunit
           [Rhizobium leguminosarum bv. viciae 3841]
          Length = 324

 Score = 71.8 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 57/144 (39%), Gaps = 5/144 (3%)

Query: 27  ARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNL 86
           +R        ++     E +     N W+P +VP+ +D+  W +   LT  E+ +  R  
Sbjct: 9   SRVRAINWNRIEDDKDLEVWNRLTGNFWLPEKVPLSNDIPSWAT---LTAAEQQLTIRVF 65

Query: 87  GFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGE 144
                 +++      + +    + P     L   +F EAVH+ ++  I ++L    D  +
Sbjct: 66  TGLTLLDTIQNGVGSIRLMEDAATPHEEAVLSNVSFMEAVHARSYSSIFSTLCSTPDVDD 125

Query: 145 LFNMYREVPSITAKANWALQYTQT 168
            +    E   +  K+   ++  ++
Sbjct: 126 AYRWSEENEFLQRKSALIMEQYRS 149


>gi|153949141|ref|YP_001400043.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           pseudotuberculosis IP 31758]
 gi|152960636|gb|ABS48097.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia
           pseudotuberculosis IP 31758]
          Length = 323

 Score = 71.8 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 56/138 (40%), Gaps = 5/138 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +D+  W +   LT  E+ +  R        
Sbjct: 14  NWNKIEDDKDLEVWNRLTSNFWLPEKVPLSNDIPSWAT---LTPHEQQLTIRVFTGLTLL 70

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYR 150
           +++       A+ +    P         +F EAVH+ ++  I ++L L  D  + +    
Sbjct: 71  DTIQNTLGAPALIKDAITPHEEAIFSNISFMEAVHARSYSSIFSTLCLTSDVDDAYRWSE 130

Query: 151 EVPSITAKANWALQYTQT 168
           +   +  KA+  LQ+   
Sbjct: 131 DNGPLQKKADIILQHYHN 148


>gi|322614368|gb|EFY11299.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315996572]
 gi|322621567|gb|EFY18420.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-1]
 gi|322624428|gb|EFY21261.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-3]
 gi|322626626|gb|EFY23431.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-4]
 gi|322633514|gb|EFY30256.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-1]
 gi|322638443|gb|EFY35141.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-2]
 gi|322639746|gb|EFY36430.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 531954]
 gi|322643792|gb|EFY40342.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322649478|gb|EFY45912.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           OH_2009072675]
 gi|322655932|gb|EFY52232.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322661327|gb|EFY57552.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 19N]
 gi|322662525|gb|EFY58733.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           81038-01]
 gi|322666899|gb|EFY63074.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MD_MDA09249507]
 gi|322671269|gb|EFY67392.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 414877]
 gi|322677724|gb|EFY73787.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 366867]
 gi|322681449|gb|EFY77479.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 413180]
 gi|322683848|gb|EFY79858.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 446600]
 gi|323193763|gb|EFZ78966.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           609458-1]
 gi|323197449|gb|EFZ82586.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           556150-1]
 gi|323203264|gb|EFZ88293.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 609460]
 gi|323205210|gb|EFZ90185.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           507440-20]
 gi|323212777|gb|EFZ97588.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str. 556152]
 gi|323218081|gb|EGA02793.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB101509-0077]
 gi|323221656|gb|EGA06069.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB102109-0047]
 gi|323225124|gb|EGA09375.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB110209-0055]
 gi|323230844|gb|EGA14962.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB111609-0052]
 gi|323234805|gb|EGA18891.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009083312]
 gi|323238844|gb|EGA22894.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009085258]
 gi|323241544|gb|EGA25575.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315731156]
 gi|323248309|gb|EGA32245.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2009159199]
 gi|323252925|gb|EGA36759.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008282]
 gi|323256953|gb|EGA40662.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008283]
 gi|323260572|gb|EGA44183.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008284]
 gi|323264370|gb|EGA47876.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008285]
 gi|323269504|gb|EGA52957.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008287]
          Length = 319

 Score = 71.8 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 53/133 (39%), Gaps = 5/133 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKIQDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSAAEQQLTIRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++       ++      P     L   +F EAVH+ ++  I ++L    +    +    
Sbjct: 67  DTIQNIAGAPSLMADAITPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKEVDAAYAWSE 126

Query: 151 EVPSITAKANWAL 163
           E P +  KA   L
Sbjct: 127 ENPPLQRKAQIIL 139


>gi|311113720|ref|YP_003984942.1| ribonucleotide-diphosphate reductase subunit beta [Rothia
           dentocariosa ATCC 17931]
 gi|310945214|gb|ADP41508.1| ribonucleotide-diphosphate reductase subunit beta [Rothia
           dentocariosa ATCC 17931]
          Length = 325

 Score = 71.8 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 53/126 (42%), Gaps = 7/126 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  WK+   LT +E+ +  R        +++      ++
Sbjct: 27  EVWDRLTGNFWLPEKVPLSNDVPSWKT---LTAEEKELTMRVFTGLTLLDTIQGTVGAVS 83

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR---EVPSITAKAN 160
           +                AF E+VH+ ++  I ++L     E+ + +R   E   +  KA 
Sbjct: 84  LLPDAVTAHEEAVYTNIAFMESVHAKSYSSIFSTLSS-TKEIDDAFRWASENEHLQKKAK 142

Query: 161 WALQYT 166
             L Y 
Sbjct: 143 IILAYY 148


>gi|3068719|gb|AAC14561.1| ribonucleoside diphosphate reductase small subunit [Corynebacterium
           ammoniagenes]
          Length = 329

 Score = 71.8 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 49/126 (38%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P ++P+ +D+  W   N +T  E+L   R        +++      ++
Sbjct: 31  EVWDRLTGNFWLPEKIPVSNDIQSW---NKMTPQEQLATMRVFTGLTLLDTIQGTVGAIS 87

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +   +            AF E+VH+ ++  I  +L       E F    E  ++  KA  
Sbjct: 88  LLPDVETMHEEGVYTNIAFMESVHAKSYSNIFMTLASTPQINEAFRWSEENENLQRKAKI 147

Query: 162 ALQYTQ 167
            + Y  
Sbjct: 148 IMSYYN 153


>gi|17989274|ref|NP_541907.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           melitensis bv. 1 str. 16M]
 gi|17985137|gb|AAL54171.1| ribonucleoside-diphosphate reductase beta chain [Brucella
           melitensis bv. 1 str. 16M]
          Length = 335

 Score = 71.8 bits (175), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 55/152 (36%), Gaps = 8/152 (5%)

Query: 12  AGEKRVNVDDKRMLNARS---DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
             E  +N+  K     R           ++     E +     N W+P +VP+ +D+  W
Sbjct: 2   TEESFMNMQHKTATKGRPASVRAINWNRIEDDKDLEVWNRLTGNFWLPEKVPLSNDIQSW 61

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           ++   L   E+ +  R        +++      + +      P     L   +F EAVH+
Sbjct: 62  ET---LKPQEKQLTTRVFTGLTLLDTIQNAVGAVKLMDDALTPHEEAVLSNISFMEAVHA 118

Query: 129 HTFQYIITS--LGLDEGELFNMYREVPSITAK 158
            ++  I ++  L  D  + +    E   +  K
Sbjct: 119 RSYSSIFSTLCLTPDVDDAYRWSEENEFLQRK 150


>gi|300741626|ref|ZP_07071647.1| ribonucleoside-diphosphate reductase, beta subunit [Rothia
           dentocariosa M567]
 gi|300380811|gb|EFJ77373.1| ribonucleoside-diphosphate reductase, beta subunit [Rothia
           dentocariosa M567]
          Length = 325

 Score = 71.8 bits (175), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 53/126 (42%), Gaps = 7/126 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  WK+   LT +E+ +  R        +++      ++
Sbjct: 27  EVWDRLTGNFWLPEKVPLSNDVPSWKT---LTAEEKELTMRVFTGLTLLDTIQGTVGAVS 83

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR---EVPSITAKAN 160
           +                AF E+VH+ ++  I ++L     E+ + +R   E   +  KA 
Sbjct: 84  LLPDAVTAHEEAVYTNIAFMESVHAKSYSSIFSTLSS-TKEIDDAFRWASENEHLQKKAK 142

Query: 161 WALQYT 166
             L Y 
Sbjct: 143 IILAYY 148


>gi|146329200|ref|YP_001209518.1| ribonucleotide reductase, beta subunit [Dichelobacter nodosus
           VCS1703A]
 gi|146232670|gb|ABQ13648.1| ribonucleotide reductase, beta subunit [Dichelobacter nodosus
           VCS1703A]
          Length = 325

 Score = 71.8 bits (175), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 58/145 (40%), Gaps = 5/145 (3%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
             Q+ P +Y    E   +  +++W+ TE     D+  +K+   ++D ER  + R++   +
Sbjct: 9   RIQIKPYEYPELLEFKDAIRHSYWLHTEFNFTGDIQDYKT--AISDAERTALTRSMLAIS 66

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
             E  V       +Y +    E        A  E  H   + +++  LG+   ELF    
Sbjct: 67  QIEVSVKRFWGD-LYHYFPKAEIDDVGGTFAESEVRHKDAYSFLLEQLGM--NELFTQIT 123

Query: 151 EVPSITAKANWALQYTQTLSSPSFH 175
            +P++ A+  +   + +     +  
Sbjct: 124 HIPALMARIEYMEAFMRNKDKNNQE 148


>gi|227548647|ref|ZP_03978696.1| ribonucleoside-diphosphate reductase [Corynebacterium
           lipophiloflavum DSM 44291]
 gi|227079261|gb|EEI17224.1| ribonucleoside-diphosphate reductase [Corynebacterium
           lipophiloflavum DSM 44291]
          Length = 332

 Score = 71.8 bits (175), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 49/126 (38%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W++   L D E+    R        +++      ++
Sbjct: 34  EVWDRLTGNFWLPEKVPVSNDIPSWRT---LNDYEKTATMRVFTGLTLLDTIQGTVGAVS 90

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +                AF E+VH+ ++  I  +L       + F    E  S+  KA  
Sbjct: 91  LLPDAKTMHEEAVYTNIAFMESVHAKSYSNIFMTLADTPAINDAFRWSEENESLQRKAKI 150

Query: 162 ALQYTQ 167
            L Y +
Sbjct: 151 ILSYYE 156


>gi|322412098|gb|EFY03006.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           dysgalactiae subsp. dysgalactiae ATCC 27957]
          Length = 319

 Score = 71.8 bits (175), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 59/133 (44%), Gaps = 8/133 (6%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           + N++  +     WEK        W+ T +P+ +DL  W+    L+D E+ ++ +  G  
Sbjct: 9   NWNEIEDVIDKSTWEKLTEQ---FWLDTRIPLSNDLDDWRK---LSDLEKDLVGKVFGGL 62

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFN 147
              +++ + + V AI + +  P     L    F E+VH+ ++  I ++L   +   E+F 
Sbjct: 63  TLLDTMQSESGVEAIRQDVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKKEIEEIFE 122

Query: 148 MYREVPSITAKAN 160
                  +  KA 
Sbjct: 123 WTNNNKFLQKKAQ 135


>gi|328945482|gb|EGG39633.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK1087]
          Length = 319

 Score = 71.8 bits (175), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 56/121 (46%), Gaps = 10/121 (8%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L+  E+ ++ +  G     ++L + + V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSHKEKDLVGKVFGGLTLLDTLQSESGVD 75

Query: 103 AIYRHL-SNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKA 159
           A+ + + +  E   +   Q F E+VH+ ++  I ++L       E+F+     P +  KA
Sbjct: 76  ALRKDVRTAHEEAVFNNIQ-FMESVHAKSYSSIFSTLNTKSEIDEIFDWTNTNPYLQKKA 134

Query: 160 N 160
            
Sbjct: 135 E 135


>gi|320539491|ref|ZP_08039160.1| putative truncated ribonucleoside-diphosphate reductase 2, beta
           subunit, ferritin-like protein [Serratia symbiotica str.
           Tucson]
 gi|320030616|gb|EFW12626.1| putative truncated ribonucleoside-diphosphate reductase 2, beta
           subunit, ferritin-like protein [Serratia symbiotica str.
           Tucson]
          Length = 309

 Score = 71.8 bits (175), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 52/127 (40%), Gaps = 5/127 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W +   LT  E+ +  R        +++       A
Sbjct: 25  EVWNRLTANFWLPEKVPLSNDIPSWAT---LTAKEQQLTLRVFTGLTLLDTIQNTVGAPA 81

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANW 161
           +      P         +F EAVH+ ++  I ++L    D  + +   +E  ++  KAN 
Sbjct: 82  LMADALTPHEEAVYSNISFMEAVHARSYSSIFSTLCQTSDVDDAYRWSQENHALQKKANL 141

Query: 162 ALQYTQT 168
            L +   
Sbjct: 142 ILTHYHA 148


>gi|152971534|ref|YP_001336643.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|150956383|gb|ABR78413.1| ribonucleotide-diphosphate reductase beta subunit [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
          Length = 320

 Score = 71.8 bits (175), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 51/129 (39%), Gaps = 5/129 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        +++       A
Sbjct: 22  EVWNRLTSNFWLPEKVPLSNDIPAWQT---LSAAEQQLTIRVFTGLTLLDTIQNTVGAPA 78

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANW 161
           +      P     L   +F EAVH+ ++  I ++L    +    F        +  KA  
Sbjct: 79  LMADALTPHEEAVLSNISFMEAVHARSYSSIFSTLCHSKEVDAAFAWSESCDPLQRKAQL 138

Query: 162 ALQYTQTLS 170
            L Y Q   
Sbjct: 139 MLDYYQADE 147


>gi|329738368|gb|AEB97332.1| ribonucleotide reductase subunit 2 [Gallid herpesvirus 1]
          Length = 310

 Score = 71.4 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 47/129 (36%), Gaps = 8/129 (6%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
               E    +  N+W   E+    D       + LT +E    K    F A+++ L+  +
Sbjct: 16  DDIRELRDLSIANNWNEFELCYSRDEKD---VDLLTPEELDFYKFVFAFLAAADDLINLD 72

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYRE----VPSI 155
           I   +     + + + Y   Q   E VHS T+  +   L   +    + Y       P+I
Sbjct: 73  IG-NLMTLFPHKDIQHYYAEQIRIETVHSRTYSLVQMILFKGDLHARDRYVTEAIKDPAI 131

Query: 156 TAKANWALQ 164
             K +W  +
Sbjct: 132 KKKIDWLNR 140


>gi|69245952|ref|ZP_00603724.1| Ribonucleoside-diphosphate reductase [Enterococcus faecium DO]
 gi|227552561|ref|ZP_03982610.1| Ribonucleoside-diphosphate reductase [Enterococcus faecium TX1330]
 gi|257880353|ref|ZP_05660006.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
           1,230,933]
 gi|257882206|ref|ZP_05661859.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
           1,231,502]
 gi|257885400|ref|ZP_05665053.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
           1,231,501]
 gi|257888211|ref|ZP_05667864.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
           1,141,733]
 gi|257891012|ref|ZP_05670665.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
           1,231,410]
 gi|257894265|ref|ZP_05673918.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
           1,231,408]
 gi|257896901|ref|ZP_05676554.1| ribonucleoside-diphosphate reductase [Enterococcus faecium Com12]
 gi|257899642|ref|ZP_05679295.1| ribonucleoside-diphosphate reductase [Enterococcus faecium Com15]
 gi|258614695|ref|ZP_05712465.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecium DO]
 gi|260562343|ref|ZP_05832857.1| ribonucleoside-diphosphate reductase [Enterococcus faecium C68]
 gi|261209282|ref|ZP_05923674.1| ribonucleoside-diphosphate reductase [Enterococcus faecium TC 6]
 gi|289567001|ref|ZP_06447402.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium D344SRF]
 gi|293378468|ref|ZP_06624631.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium PC4.1]
 gi|293553988|ref|ZP_06674590.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1039]
 gi|293563177|ref|ZP_06677635.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1162]
 gi|293568383|ref|ZP_06679704.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1071]
 gi|293570828|ref|ZP_06681875.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E980]
 gi|294615274|ref|ZP_06695151.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1636]
 gi|294617336|ref|ZP_06696975.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1679]
 gi|294623134|ref|ZP_06702020.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium U0317]
 gi|314939361|ref|ZP_07846602.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium TX0133a04]
 gi|314941564|ref|ZP_07848449.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium TX0133C]
 gi|314949609|ref|ZP_07852933.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium TX0082]
 gi|314953716|ref|ZP_07856591.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium TX0133A]
 gi|314992172|ref|ZP_07857616.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium TX0133B]
 gi|314997663|ref|ZP_07862593.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium TX0133a01]
 gi|68195482|gb|EAN09926.1| Ribonucleoside-diphosphate reductase [Enterococcus faecium DO]
 gi|227178310|gb|EEI59282.1| Ribonucleoside-diphosphate reductase [Enterococcus faecium TX1330]
 gi|257814581|gb|EEV43339.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
           1,230,933]
 gi|257817864|gb|EEV45192.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
           1,231,502]
 gi|257821256|gb|EEV48386.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
           1,231,501]
 gi|257824265|gb|EEV51197.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
           1,141,733]
 gi|257827372|gb|EEV53998.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
           1,231,410]
 gi|257830644|gb|EEV57251.1| ribonucleoside-diphosphate reductase [Enterococcus faecium
           1,231,408]
 gi|257833466|gb|EEV59887.1| ribonucleoside-diphosphate reductase [Enterococcus faecium Com12]
 gi|257837554|gb|EEV62628.1| ribonucleoside-diphosphate reductase [Enterococcus faecium Com15]
 gi|260073267|gb|EEW61608.1| ribonucleoside-diphosphate reductase [Enterococcus faecium C68]
 gi|260076828|gb|EEW64563.1| ribonucleoside-diphosphate reductase [Enterococcus faecium TC 6]
 gi|289161202|gb|EFD09101.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium D344SRF]
 gi|291588904|gb|EFF20731.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1071]
 gi|291591871|gb|EFF23503.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1636]
 gi|291596409|gb|EFF27663.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1679]
 gi|291597503|gb|EFF28668.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium U0317]
 gi|291601845|gb|EFF32095.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1039]
 gi|291604868|gb|EFF34344.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1162]
 gi|291609096|gb|EFF38371.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E980]
 gi|292642797|gb|EFF60944.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium PC4.1]
 gi|313588298|gb|EFR67143.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium TX0133a01]
 gi|313593275|gb|EFR72120.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium TX0133B]
 gi|313594300|gb|EFR73145.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium TX0133A]
 gi|313599623|gb|EFR78466.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium TX0133C]
 gi|313641346|gb|EFS05926.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium TX0133a04]
 gi|313644033|gb|EFS08613.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium TX0082]
          Length = 321

 Score = 71.4 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 58/133 (43%), Gaps = 8/133 (6%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           + N++  +     WEK        W+ T +P+ +DL  W++   L+  E+  +    G  
Sbjct: 10  NWNEIEDIIDKSTWEKLTEQ---FWLDTRIPLSNDLDDWRT---LSQLEKDTVGHVFGGL 63

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFN 147
              +++ + + +  + + +  P     L    F E+VH+ ++  I ++L   +   E+F+
Sbjct: 64  TLLDTVQSESGMDQLRKDVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKKEIEEIFD 123

Query: 148 MYREVPSITAKAN 160
                P +  KA 
Sbjct: 124 WTNTNPYLQKKAE 136


>gi|293394770|ref|ZP_06639061.1| ribonucleotide-diphosphate reductase subunit beta [Serratia
           odorifera DSM 4582]
 gi|291422721|gb|EFE95959.1| ribonucleotide-diphosphate reductase subunit beta [Serratia
           odorifera DSM 4582]
          Length = 319

 Score = 71.4 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 55/138 (39%), Gaps = 5/138 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +D+  W +   LT  E+ +  R        
Sbjct: 10  NWNRIEDDKDLEVWNRLTSNFWLPEKVPLSNDIPSWAT---LTAKEQQLTIRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++        +      P         +F EAVH+ ++  I ++L    D  + +    
Sbjct: 67  DTIQNTVGAPTLIDDAITPHEEAVYSNISFMEAVHARSYSSIFSTLCQTRDVDDAYRWSE 126

Query: 151 EVPSITAKANWALQYTQT 168
           E  ++  KA+  L + ++
Sbjct: 127 ENRALQKKADIILAHYRS 144


>gi|159184148|ref|NP_353105.2| ribonucleotide-diphosphate reductase subunit beta [Agrobacterium
           tumefaciens str. C58]
 gi|159139483|gb|AAK85890.2| ribonucleoside-diphosphate reductase 2 beta chain [Agrobacterium
           tumefaciens str. C58]
          Length = 324

 Score = 71.4 bits (174), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 54/138 (39%), Gaps = 5/138 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +D+  W     L  +E+ +  R        
Sbjct: 15  NWNRIEDDKDLEVWNRLTSNFWLPEKVPLSNDIPSW---GTLKPEEQELTIRVFTGLTLL 71

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++      + +    + P     L   +F EAVH+ ++  I ++L    D  + +    
Sbjct: 72  DTIQNGVGAVRLMPDSATPHEEAVLSNISFMEAVHARSYSSIFSTLCSTPDVDDAYRWSE 131

Query: 151 EVPSITAKANWALQYTQT 168
           E   +  K+   ++   +
Sbjct: 132 ENEFLQRKSAIIMREYDS 149


>gi|67008229|emb|CAH18519.1| ribonucleoside-dihosphate reductase beta chain [Rhodobacteraceae
           bacterium 198]
          Length = 325

 Score = 71.4 bits (174), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 5/131 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W     LT DE+ +  R        +++        
Sbjct: 26  EIWNRLTVNFWLPEKVPLSNDIQSWSQ---LTPDEQTLTIRVFTGLTLLDTIQNAVGAPT 82

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANW 161
           + +    P     L   AF EAVH+ ++  + ++L    +  E F    E   + AK+  
Sbjct: 83  LMQDAITPHEESVLSNIAFMEAVHARSYSSVFSTLCQTTEVDEAFRWSAENEHLQAKSRL 142

Query: 162 ALQYTQTLSSP 172
            L    + +SP
Sbjct: 143 ILDEYNSTASP 153


>gi|225686158|ref|YP_002734130.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           melitensis ATCC 23457]
 gi|256043236|ref|ZP_05446173.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|256262715|ref|ZP_05465247.1| ribonucleotide reductase [Brucella melitensis bv. 2 str. 63/9]
 gi|260564448|ref|ZP_05834933.1| ribonucleotide reductase [Brucella melitensis bv. 1 str. 16M]
 gi|265989661|ref|ZP_06102218.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|225642263|gb|ACO02176.1| Ribonucleoside-diphosphate reductase [Brucella melitensis ATCC
           23457]
 gi|260152091|gb|EEW87184.1| ribonucleotide reductase [Brucella melitensis bv. 1 str. 16M]
 gi|263000330|gb|EEZ13020.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|263092503|gb|EEZ16756.1| ribonucleotide reductase [Brucella melitensis bv. 2 str. 63/9]
 gi|326410495|gb|ADZ67559.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           melitensis M28]
 gi|326553787|gb|ADZ88426.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           melitensis M5-90]
          Length = 329

 Score = 71.4 bits (174), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 54/147 (36%), Gaps = 8/147 (5%)

Query: 17  VNVDDKRMLNARS---DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           +N+  K     R           ++     E +     N W+P +VP+ +D+  W++   
Sbjct: 1   MNMQHKTATKGRPASVRAINWNRIEDDKDLEVWNRLTGNFWLPEKVPLSNDIQSWET--- 57

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           L   E+ +  R        +++      + +      P     L   +F EAVH+ ++  
Sbjct: 58  LKPQEKQLTTRVFTGLTLLDTIQNAVGAVKLMDDALTPHEEAVLSNISFMEAVHARSYSS 117

Query: 134 IITS--LGLDEGELFNMYREVPSITAK 158
           I ++  L  D  + +    E   +  K
Sbjct: 118 IFSTLCLTPDVDDAYRWSEENEFLQRK 144


>gi|327458665|gb|EGF05013.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK1057]
          Length = 319

 Score = 71.4 bits (174), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 56/121 (46%), Gaps = 10/121 (8%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L+  E+ ++ +  G     ++L + + V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSHKEKDLVGKVFGGLTLLDTLQSESGVD 75

Query: 103 AIYRHL-SNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKA 159
           A+ + + +  E   +   Q F E+VH+ ++  I ++L       E+F+     P +  KA
Sbjct: 76  ALRKDVRTAHEEAVFNNIQ-FMESVHAKSYSSIFSTLNTKSEIDEIFDWTNTNPYLQKKA 134

Query: 160 N 160
            
Sbjct: 135 E 135


>gi|238896131|ref|YP_002920867.1| ribonucleotide-diphosphate reductase subunit beta [Klebsiella
           pneumoniae NTUH-K2044]
 gi|238548449|dbj|BAH64800.1| ribonucleotide-diphosphate reductase beta subunit [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 333

 Score = 71.4 bits (174), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 51/129 (39%), Gaps = 5/129 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        +++       A
Sbjct: 35  EVWNRLTSNFWLPEKVPLSNDIPAWQT---LSAAEQQLTIRVFTGLTLLDTIQNTVGAPA 91

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANW 161
           +      P     L   +F EAVH+ ++  I ++L    +    F        +  KA  
Sbjct: 92  LMADALTPHEEAVLSNISFMEAVHARSYSSIFSTLCHSKEVDAAFAWSESCDPLQRKAQL 151

Query: 162 ALQYTQTLS 170
            L Y Q   
Sbjct: 152 MLGYYQADE 160


>gi|222475861|ref|YP_002564382.1| ribonucleotide reductase [Halorubrum lacusprofundi ATCC 49239]
 gi|222454232|gb|ACM58496.1| ribonucleotide reductase [Halorubrum lacusprofundi ATCC 49239]
          Length = 336

 Score = 71.4 bits (174), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 5/133 (3%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
           S+  QL P +Y    +   +  N++W+ TE     D+  +K     T  E+ +IKR +  
Sbjct: 17  SERTQLKPYEYNDFLDYKDAIRNSYWVHTEFNFSGDVQDFKVNT--TPAEKTVIKRTMLA 74

Query: 89  FASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNM 148
            A  E  V       IY  +   E     +  A  E  H   + +++  LG+     F  
Sbjct: 75  IAQIEVQVKTFWSD-IYEEMPKAEIGSVGMTFAESEVRHMDAYSHLLDVLGITGD--FEE 131

Query: 149 YREVPSITAKANW 161
             EVP++  +  +
Sbjct: 132 VTEVPAVKDRIEY 144


>gi|288933942|ref|YP_003438001.1| ribonucleoside-diphosphate reductase [Klebsiella variicola At-22]
 gi|290510980|ref|ZP_06550349.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           1_1_55]
 gi|288888671|gb|ADC56989.1| Ribonucleoside-diphosphate reductase [Klebsiella variicola At-22]
 gi|289775973|gb|EFD83972.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           1_1_55]
          Length = 320

 Score = 71.4 bits (174), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 51/129 (39%), Gaps = 5/129 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        +++       A
Sbjct: 22  EVWNRLTSNFWLPEKVPLSNDIPAWQT---LSAAEQQLTIRVFTGLTLLDTIQNTVGAPA 78

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANW 161
           +      P     L   +F EAVH+ ++  I ++L    +    F        +  KA  
Sbjct: 79  LMADALTPHEEAVLSNISFMEAVHARSYSSIFSTLCHSKEVDAAFAWSESCEPLQRKAQL 138

Query: 162 ALQYTQTLS 170
            L Y Q   
Sbjct: 139 MLGYYQADE 147


>gi|327189837|gb|EGE56975.1| ribonucleoside-diphosphate reductase protein, beta subunit
           [Rhizobium etli CNPAF512]
          Length = 324

 Score = 71.4 bits (174), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 54/140 (38%), Gaps = 5/140 (3%)

Query: 27  ARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNL 86
           +R        ++     E +     N W+P +VP+ +D+  W +   LT  E+ +  R  
Sbjct: 9   SRVRAINWNRIEDEKDLEVWNRLTGNFWLPEKVPLSNDIPSWAT---LTAAEQQLTIRVF 65

Query: 87  GFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGE 144
                 +++      + +      P     L   +F EAVH+ ++  I ++L    D  +
Sbjct: 66  TGLTLLDTIQNGVGAIRLMEDAMTPHEEAVLSNVSFMEAVHARSYSSIFSTLCSTPDVDD 125

Query: 145 LFNMYREVPSITAKANWALQ 164
            +    E   +  K+   ++
Sbjct: 126 AYRWSEENEFLQRKSALIME 145


>gi|325694009|gb|EGD35927.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK150]
          Length = 319

 Score = 71.4 bits (174), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 56/121 (46%), Gaps = 10/121 (8%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L+  E+ ++ +  G     ++L + + V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSHKEKDLVGKVFGGLTLLDTLQSESGVD 75

Query: 103 AIYRHL-SNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKA 159
           A+ + + +  E   +   Q F E+VH+ ++  I ++L       E+F+     P +  KA
Sbjct: 76  ALRKDVRTAHEEAVFNNIQ-FMESVHAKSYSSIFSTLNTKSEIDEIFDWTNTNPYLQKKA 134

Query: 160 N 160
            
Sbjct: 135 E 135


>gi|172039808|ref|YP_001799522.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           urealyticum DSM 7109]
 gi|171851112|emb|CAQ04088.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           urealyticum DSM 7109]
          Length = 334

 Score = 71.4 bits (174), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 16/122 (13%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN-NIVL 102
           E +L    N W+P +VP+ +DL  W   N L+D ER +  R        +++ A    + 
Sbjct: 37  EVWLRLTANFWLPEKVPLSNDLPDW---NRLSDLERTLTMRVFTGLTLLDTMQATVGEIS 93

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWA 162
            I   L+  E   Y    AF +AVH+ ++             +F+     P+I    +WA
Sbjct: 94  QIQDALTEHEEAVYTNI-AFMQAVHARSYS-----------SVFSTLSSTPAINDAYDWA 141

Query: 163 LQ 164
           ++
Sbjct: 142 VK 143


>gi|206577235|ref|YP_002236984.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella
           pneumoniae 342]
 gi|206566293|gb|ACI08069.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella
           pneumoniae 342]
          Length = 320

 Score = 71.4 bits (174), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 51/129 (39%), Gaps = 5/129 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        +++       A
Sbjct: 22  EVWNRLTSNFWLPEKVPLSNDIPAWQT---LSAAEQQLTIRVFTGLTLLDTIQNTVGAPA 78

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANW 161
           +      P     L   +F EAVH+ ++  I ++L    +    F        +  KA  
Sbjct: 79  LMADSLTPHEEAVLSNISFMEAVHARSYSSIFSTLCHSKEVDAAFAWSESCEPLQRKAQL 138

Query: 162 ALQYTQTLS 170
            L Y Q   
Sbjct: 139 MLGYYQADE 147


>gi|9629622|ref|NP_044898.1| ribonucleotide reductase subunit 2 [Murid herpesvirus 4]
 gi|6625623|gb|AAF19324.1|AF105037_56 60 [murid herpesvirus 4]
 gi|1850859|emb|CAA70275.1| ribonucleotide reductase, small subunit [Murid herpesvirus 4]
 gi|2317992|gb|AAB66450.1| ribonucleotide reductase small [murid herpesvirus 4]
          Length = 305

 Score = 71.4 bits (174), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 53/147 (36%), Gaps = 13/147 (8%)

Query: 51  NNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSN 110
            N W P+++P+  D+A       L + +R   K    F   +E LV  NI   + +  + 
Sbjct: 25  KNMWFPSQIPLSSDVA---GIAQLNETDREFYKFLFVFLGLAERLVNFNI-EDLVKEFNC 80

Query: 111 PECRQYLLRQAFEEAVHSHTFQYIITSLG----LDEGELFNMYREVPSITAKANWALQYT 166
            +   Y   Q   E +H   +  I+        +   E        P++ AK +W     
Sbjct: 81  HDATHYYAEQMAMENIHGKVYANILQLFFNGDMMKLKEYAVKVVADPTLKAKLDWLHTRV 140

Query: 167 QTLSSPSFHYWNKRRRSRILTRSLRFL 193
           +     +     ++    +L   + F+
Sbjct: 141 K-----NTKTRAEKVLIFLLIEGIFFI 162


>gi|258622932|ref|ZP_05717948.1| Ribonucleoside-diphosphate reductase subunit beta [Vibrio mimicus
           VM573]
 gi|258624605|ref|ZP_05719543.1| Ribonucleoside-diphosphate reductase subunit beta [Vibrio mimicus
           VM603]
 gi|262165762|ref|ZP_06033499.1| ribonucleotide reductase of class Ib (aerobic) beta subunit [Vibrio
           mimicus VM223]
 gi|262171415|ref|ZP_06039093.1| ribonucleotide reductase of class Ib (aerobic) beta subunit [Vibrio
           mimicus MB-451]
 gi|258583152|gb|EEW07963.1| Ribonucleoside-diphosphate reductase subunit beta [Vibrio mimicus
           VM603]
 gi|258584871|gb|EEW09604.1| Ribonucleoside-diphosphate reductase subunit beta [Vibrio mimicus
           VM573]
 gi|261892491|gb|EEY38477.1| ribonucleotide reductase of class Ib (aerobic) beta subunit [Vibrio
           mimicus MB-451]
 gi|262025478|gb|EEY44146.1| ribonucleotide reductase of class Ib (aerobic) beta subunit [Vibrio
           mimicus VM223]
          Length = 323

 Score = 71.4 bits (174), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 56/146 (38%), Gaps = 7/146 (4%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +DL+ W     LT+ E+ +  R        +++  +    A
Sbjct: 24  EIWNRLTVNFWLPEKVPLSNDLSTW---GLLTEQEQTLTIRVFTGLTLLDTIQNSVGAPA 80

Query: 104 IY-RHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           +    ++  E        AF EAVH+ ++  + ++L   +   E F    E P +  KA 
Sbjct: 81  LMVDAVTQHEEAVLTNI-AFMEAVHARSYSSVFSTLCTTKQIDEAFRWSEENPHLQRKAQ 139

Query: 161 WALQYTQTLSSPSFHYWNKRRRSRIL 186
             L   Q    P             L
Sbjct: 140 LILHEYQAGECPLKKKIASVFLESFL 165


>gi|71034151|ref|XP_766717.1| ribonucleotide-diphosphate reductase small subunit [Theileria parva
           strain Muguga]
 gi|68353674|gb|EAN34434.1| ribonucleotide-diphosphate reductase small subunit, putative
           [Theileria parva]
          Length = 326

 Score = 71.4 bits (174), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 56/151 (37%), Gaps = 15/151 (9%)

Query: 20  DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER 79
           +D+ +L    +   + P+++   W  Y    NN W   +    DDL    S   L     
Sbjct: 20  NDEILLKENHNRWVMFPIEHDTFWIMYKEVENNFWAAEDFIFSDDLN---SLFKLPKPLF 76

Query: 80  LMIKRNLGFFASSES-LVAN--NIVLAIYRHLSNPECRQYLLRQAFEEAVHSH----TFQ 132
             +   L F  + ++  V    ++ L +   +   E R +   Q  +E +H+      FQ
Sbjct: 77  NSLFHLLSFHINLDNKWVCRPVDMTLELLSEVQIAEARAFYGFQLTDENIHTETIGTMFQ 136

Query: 133 YII----TSLGLDEGE-LFNMYREVPSITAK 158
            +      ++G D+   L+N   +      +
Sbjct: 137 LLNQPLDNTIGQDKITWLYNECEKNKCFFKR 167


>gi|262283137|ref|ZP_06060904.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sp. 2_1_36FAA]
 gi|262261389|gb|EEY80088.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sp. 2_1_36FAA]
          Length = 319

 Score = 71.0 bits (173), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 10/121 (8%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L+  E+ ++ +  G     ++L + + V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSHKEKDLVGKVFGGLTLLDTLQSESGVD 75

Query: 103 AIYRHL-SNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKA 159
           A+ + + +  E   +   Q F E+VH+ ++  I ++L       E+F      P +  KA
Sbjct: 76  ALRKDVRTAHEEAVFNNIQ-FMESVHAKSYSSIFSTLNTKSEIDEIFAWTNTNPYLQKKA 134

Query: 160 N 160
            
Sbjct: 135 E 135


>gi|307944765|ref|ZP_07660103.1| ribonucleoside-diphosphate reductase, beta subunit [Roseibium sp.
           TrichSKD4]
 gi|307771979|gb|EFO31202.1| ribonucleoside-diphosphate reductase, beta subunit [Roseibium sp.
           TrichSKD4]
          Length = 329

 Score = 71.0 bits (173), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 51/131 (38%), Gaps = 5/131 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W +   L  DE+ +  R        +++        
Sbjct: 30  EIWNRLTVNFWLPEKVPLSNDIQSWAT---LHPDEQQLTIRVFTGLTLLDTIQNTVGAPT 86

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANW 161
           +      P     L   AF EAVH+ ++  + ++L    D  E F    E   + AK+  
Sbjct: 87  LMPDALTPHEEAVLTNIAFMEAVHARSYSSVFSTLCQTADVDEAFRWSEENEHLQAKSRL 146

Query: 162 ALQYTQTLSSP 172
            L       SP
Sbjct: 147 ILDEYGAAGSP 157


>gi|324993305|gb|EGC25225.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK405]
 gi|324995391|gb|EGC27303.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK678]
 gi|325697177|gb|EGD39064.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK160]
 gi|327461576|gb|EGF07907.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK1]
 gi|327473300|gb|EGF18720.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK408]
          Length = 319

 Score = 71.0 bits (173), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 10/121 (8%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L+  E+ ++ +  G     ++L + + V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSHKEKDLVGKVFGGLTLLDTLQSESGVD 75

Query: 103 AIYRHL-SNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKA 159
           A+ + + +  E   +   Q F E+VH+ ++  I ++L       E+F      P +  KA
Sbjct: 76  ALRKDVRTAHEEAVFNNIQ-FMESVHAKSYSSIFSTLNTKSEIDEIFAWTNTNPYLQKKA 134

Query: 160 N 160
            
Sbjct: 135 E 135


>gi|259417680|ref|ZP_05741599.1| ribonucleoside-diphosphate reductase, beta subunit [Silicibacter
           sp. TrichCH4B]
 gi|259346586|gb|EEW58400.1| ribonucleoside-diphosphate reductase, beta subunit [Silicibacter
           sp. TrichCH4B]
          Length = 325

 Score = 71.0 bits (173), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 53/131 (40%), Gaps = 5/131 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W     LT DE+ +  R        +++        
Sbjct: 26  EIWNRLTVNFWLPEKVPLSNDIQSWSQ---LTPDEQTLTIRVFTGLTLLDTIQNAVGAPT 82

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANW 161
           + +    P     L   AF EAVH+ ++  + ++L    +  E F    E   + AK+  
Sbjct: 83  LMQDAITPHEEAVLSNIAFMEAVHARSYSSVFSTLCQTTEVDEAFRWSAENEHLQAKSRL 142

Query: 162 ALQYTQTLSSP 172
            L      +SP
Sbjct: 143 ILDEYDATASP 153


>gi|157149762|ref|YP_001450838.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           gordonii str. Challis substr. CH1]
 gi|157074556|gb|ABV09239.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           gordonii str. Challis substr. CH1]
          Length = 319

 Score = 71.0 bits (173), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 10/121 (8%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L+  E+ ++ +  G     ++L + + V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSHKEKDLVGKVFGGLTLLDTLQSESGVD 75

Query: 103 AIYRHL-SNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKA 159
           A+ + + +  E   +   Q F E+VH+ ++  I ++L       E+F      P +  KA
Sbjct: 76  ALRKDVRTAHEEAVFNNIQ-FMESVHAKSYSSIFSTLNTKSEIDEIFAWTNTNPYLQKKA 134

Query: 160 N 160
            
Sbjct: 135 E 135


>gi|323167150|gb|EFZ52868.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella
           sonnei 53G]
          Length = 177

 Score = 71.0 bits (173), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   LT  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LTVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|327489434|gb|EGF21227.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK1058]
          Length = 319

 Score = 71.0 bits (173), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 10/121 (8%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L+  E+ ++ +  G     ++L + + V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSHKEKDLVGKVFGGLTLLDTLQSESGVD 75

Query: 103 AIYRHL-SNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKA 159
           A+ + + +  E   +   Q F E+VH+ ++  I ++L       E+F      P +  KA
Sbjct: 76  ALRKDVRTAHEEAVFNNIQ-FMESVHAKSYSSIFSTLNTKSEIDEIFAWTNTNPYLQKKA 134

Query: 160 N 160
            
Sbjct: 135 E 135


>gi|82545243|ref|YP_409190.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii
           Sb227]
 gi|81246654|gb|ABB67362.1| ribonucleoside-diphosphate reductase 2, beta chain, frag [Shigella
           boydii Sb227]
 gi|320186462|gb|EFW61190.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           flexneri CDC 796-83]
 gi|332091953|gb|EGI97031.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella
           boydii 3594-74]
          Length = 304

 Score = 71.0 bits (173), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 54/137 (39%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   LT  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LTVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++  +   P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPYALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|190893561|ref|YP_001980103.1| ribonucleoside-diphosphate reductase protein, beta subunit
           [Rhizobium etli CIAT 652]
 gi|190698840|gb|ACE92925.1| ribonucleoside-diphosphate reductase protein, beta subunit
           [Rhizobium etli CIAT 652]
          Length = 324

 Score = 71.0 bits (173), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 54/140 (38%), Gaps = 5/140 (3%)

Query: 27  ARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNL 86
           +R        ++     E +     N W+P +VP+ +D+  W +   LT  E+ +  R  
Sbjct: 9   SRVRAINWNRIEDDKDLEVWNRLTGNFWLPEKVPLSNDIPSWAT---LTAAEQQLTIRVF 65

Query: 87  GFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGE 144
                 +++      + +      P     L   +F EAVH+ ++  I ++L    D  +
Sbjct: 66  TGLTLLDTIQNGVGAIRLMEDAMTPHEEAVLSNVSFMEAVHARSYSSIFSTLCSTPDIDD 125

Query: 145 LFNMYREVPSITAKANWALQ 164
            +    E   +  K+   ++
Sbjct: 126 AYRWSEENEFLQRKSALIME 145


>gi|260579705|ref|ZP_05847564.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
           [Corynebacterium jeikeium ATCC 43734]
 gi|258602135|gb|EEW15453.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
           [Corynebacterium jeikeium ATCC 43734]
          Length = 331

 Score = 71.0 bits (173), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 50/145 (34%), Gaps = 6/145 (4%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W   + L D E+    R        +++      + 
Sbjct: 33  EVWDRLTANFWLPEKVPLSNDVPSW---STLNDMEKQATMRVFTGLTMLDTIQGTVGAVK 89

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +    + P         +F E+VH+ ++  I  +L       + F    E   +  KA  
Sbjct: 90  LIEDAATPHEEAVFTNISFMESVHAKSYSSIFMTLASTPEINDAFRWSEENEKLQNKAKI 149

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRIL 186
            L + +    P             L
Sbjct: 150 ILDFYEG-DDPMKKKIASVLLESFL 173


>gi|198241755|ref|YP_002216784.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|197936271|gb|ACH73604.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|326624542|gb|EGE30887.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Dublin str. 3246]
          Length = 319

 Score = 71.0 bits (173), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 53/133 (39%), Gaps = 5/133 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKIQDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSAAEQQLTIRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++       ++      P     L   +F EAVH+ ++  I ++L    +    +    
Sbjct: 67  DTIQNIAGAPSLMADAITPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKEVDVAYAWSE 126

Query: 151 EVPSITAKANWAL 163
           E P +  KA   L
Sbjct: 127 ENPPLQRKAQIIL 139


>gi|327468920|gb|EGF14392.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK330]
          Length = 319

 Score = 71.0 bits (173), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 10/121 (8%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L+  E+ ++ +  G     ++L + + V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSHKEKDLVGKVFGGLTLLDTLQSESGVD 75

Query: 103 AIYRHL-SNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKA 159
           A+ + + +  E   +   Q F E+VH+ ++  I ++L       E+F      P +  KA
Sbjct: 76  ALRKDVRTAHEEAVFNNIQ-FMESVHAKSYSSIFSTLNTKSEIDEIFAWTNTNPYLQKKA 134

Query: 160 N 160
            
Sbjct: 135 E 135


>gi|324990559|gb|EGC22495.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK353]
          Length = 319

 Score = 71.0 bits (173), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 10/121 (8%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L+  E+ ++ +  G     ++L + + V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSHKEKDLVGKVFGGLTLLDTLQSESGVD 75

Query: 103 AIYRHL-SNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKA 159
           A+ + + +  E   +   Q F E+VH+ ++  I ++L       E+F      P +  KA
Sbjct: 76  ALRKDVRTAHEEAVFNNIQ-FMESVHAKSYSSIFSTLNTKSEIDEIFAWTNTNPYLQKKA 134

Query: 160 N 160
            
Sbjct: 135 E 135


>gi|327440528|dbj|BAK16893.1| ribonucleotide reductase, beta subunit [Solibacillus silvestris
           StLB046]
          Length = 320

 Score = 71.0 bits (173), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 57/154 (37%), Gaps = 7/154 (4%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
           A   +       W P E+ +  D+  WK         +   K+  G     +++  N  +
Sbjct: 19  ARIFWDQQWKQIWFPEEIAVSKDVKQWKEFEH-----QDTYKKVFGGLTLLDTVQTNIGM 73

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKA 159
             I ++  + + +  L      EA+H+ ++ YI T+L  +    E+F   ++   +  KA
Sbjct: 74  NEIAKYTPDFQEKAVLTVFGSFEAIHAKSYSYIFTTLCTNTEIDEVFEWVQKNEFLQYKA 133

Query: 160 NWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           N   +    +         K   + ++  S  F 
Sbjct: 134 NRIGEVYTAIKEDDPESLWKAMFASVMLESFLFY 167


>gi|68535550|ref|YP_250255.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           jeikeium K411]
 gi|68263149|emb|CAI36637.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           jeikeium K411]
          Length = 331

 Score = 71.0 bits (173), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 50/145 (34%), Gaps = 6/145 (4%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W   + L D E+    R        +++      + 
Sbjct: 33  EVWDRLTANFWLPEKVPLSNDVPSW---STLNDMEKQATMRVFTGLTMLDTIQGTVGAVK 89

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +    + P         +F E+VH+ ++  I  +L       + F    E   +  KA  
Sbjct: 90  LIEDAATPHEEAVFTNISFMESVHAKSYSSIFMTLASTPEINDAFRWSEENEKLQNKAKI 149

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRIL 186
            L + +    P             L
Sbjct: 150 ILDFYEG-DDPMKKKIASVLLESFL 173


>gi|9630287|ref|NP_046714.1| hypothetical protein SPBc2p162 [Bacillus phage SPBc2]
 gi|50812253|ref|NP_389886.2| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|75090792|sp|O64174|BNRDF_BPSPC RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|81637506|sp|O30601|YOSP_BACSU RecName: Full=SPBc2 prophage-derived ribonucleoside-diphosphate
           reductase subunit beta; AltName: Full=Ribonucleotide
           reductase small subunit
 gi|2522310|gb|AAB92486.1| YojQ/S [Bacillus subtilis subsp. subtilis str. 168]
 gi|3025640|gb|AAC13135.1| unknown [Bacillus phage SPbeta]
 gi|32468776|emb|CAB13896.2| SPbeta phage ribonucleoside-diphosphate reductase, beta subunit
           [Bacillus subtilis subsp. subtilis str. 168]
          Length = 329

 Score = 71.0 bits (173), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 6/152 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            Y       W+P E+ +  DL  WK    L  +E+    + L      ++   N  +  +
Sbjct: 21  FYNQNVKQFWLPEEIALNGDLLTWK---YLGKNEQDTYMKVLAGLTLLDTEQGNTGMPIV 77

Query: 105 YRHLSNPECRQYLLRQAFEEA-VHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
             H+   + +  L   A  E  VH+ ++  I  +L   E   E+F   +    +  KA  
Sbjct: 78  AEHVDGHQRKAVLNFMAMMENAVHAKSYSNIFLTLAPTEQINEVFEWVKNNRFLQKKART 137

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            +   +T+         K   + +   S  F 
Sbjct: 138 IVSVYKTIKKNDEISLFKGMVASVFLESFLFY 169


>gi|300718018|ref|YP_003742821.1| Ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia
           billingiae Eb661]
 gi|299063854|emb|CAX60974.1| Ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia
           billingiae Eb661]
          Length = 319

 Score = 71.0 bits (173), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 51/126 (40%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +    +N W+P +VP+ +D+  W   N L  DE+ +  R        +++       A
Sbjct: 21  EVWNRLTSNFWLPEKVPLSNDIPAW---NSLNADEQQLTIRVFTGLTLLDTIQNTVGAPA 77

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANW 161
           +      P     +   +F EAVH+ ++  I ++L    D    +    +   +  KA  
Sbjct: 78  LMADAVTPHEEAVMSNVSFMEAVHARSYSSIFSTLCHTTDVDAAYAWSEDNQPLQRKAEI 137

Query: 162 ALQYTQ 167
            L++  
Sbjct: 138 ILEHYH 143


>gi|125717616|ref|YP_001034749.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK36]
 gi|323352633|ref|ZP_08087603.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis VMC66]
 gi|125497533|gb|ABN44199.1| Ribonucleoside-diphosphate reductase 2, beta subunit, putative
           [Streptococcus sanguinis SK36]
 gi|322121669|gb|EFX93415.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis VMC66]
 gi|325688330|gb|EGD30349.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK72]
 gi|325690076|gb|EGD32080.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis SK115]
          Length = 319

 Score = 71.0 bits (173), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 10/121 (8%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L+  E+ ++ +  G     ++L + + V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSHKEKDLVGKVFGGLTLLDTLQSESGVD 75

Query: 103 AIYRHL-SNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKA 159
           A+ + + +  E   +   Q F E+VH+ ++  I ++L       E+F      P +  KA
Sbjct: 76  ALRKDVRTAHEEAVFNNIQ-FMESVHAKSYSSIFSTLNTKSEIDEIFAWTNTNPYLQKKA 134

Query: 160 N 160
            
Sbjct: 135 E 135


>gi|238755711|ref|ZP_04617045.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia ruckeri
           ATCC 29473]
 gi|238706078|gb|EEP98461.1| Ribonucleoside-diphosphate reductase subunit beta [Yersinia ruckeri
           ATCC 29473]
          Length = 323

 Score = 71.0 bits (173), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 51/126 (40%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +    +N W+P +VP+ +D+  W     LT  E+ +  R        +++        
Sbjct: 25  EVWNRLTSNFWLPEKVPLSNDIPSWA---MLTAQEKQLTIRVFTGLTLLDTIQNTVGAPT 81

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYREVPSITAKANW 161
           + +    P         +F EAVH+ ++  I ++L +  D  + +    E  ++  KA  
Sbjct: 82  LLQDAITPHEEAVFSNISFMEAVHARSYSSIFSTLCMTSDVDDAYRWSEENTTLQKKAQI 141

Query: 162 ALQYTQ 167
            L +  
Sbjct: 142 ILNHYH 147


>gi|253990649|ref|YP_003042005.1| ribonucleotide-diphosphate reductase subunit beta [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|253782099|emb|CAQ85263.1| ribonucleoside-diphosphate reductase 2 beta chain [Photorhabdus
           asymbiotica]
          Length = 319

 Score = 71.0 bits (173), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 54/136 (39%), Gaps = 5/136 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               LK     E +     N W+P +VP+ +D+  W   N LT +E+ +  R        
Sbjct: 10  NWNRLKDDKDLEVWNRLTTNFWLPEKVPLSNDIPSW---NTLTAEEKKLTIRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYR 150
           +++       A+      P     +   +F EAVH+ ++  I ++L L  D  + +    
Sbjct: 67  DTIQNTVGAPALMEDALTPHEEAVMSNISFMEAVHARSYSSIFSTLCLTADVDDAYYWSE 126

Query: 151 EVPSITAKANWALQYT 166
              ++  KA   L Y 
Sbjct: 127 NNLALQNKAKIILNYY 142


>gi|157371959|ref|YP_001479948.1| ribonucleotide-diphosphate reductase subunit beta [Serratia
           proteamaculans 568]
 gi|157323723|gb|ABV42820.1| Ribonucleoside-diphosphate reductase [Serratia proteamaculans 568]
          Length = 323

 Score = 71.0 bits (173), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 55/128 (42%), Gaps = 7/128 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN-NIVL 102
           E +    +N W+P +VP+ +D+  W +   LT  E+ +  R        +++        
Sbjct: 25  EVWNRLTSNFWLPEKVPLSNDIPSWAT---LTPKEQQLTIRVFTGLTLLDTIQNTVGAPA 81

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKAN 160
            I   ++ P         +F EAVH+ ++  I ++L    D  + +    E  ++  KA+
Sbjct: 82  LIADAIT-PHEEAVYSNISFMEAVHARSYSSIFSTLCQTPDVDDAYRWSEENRALQKKAS 140

Query: 161 WALQYTQT 168
             L + ++
Sbjct: 141 IILAHYRS 148


>gi|293374706|ref|ZP_06621014.1| ribonucleoside-diphosphate reductase, beta subunit [Turicibacter
           sanguinis PC909]
 gi|325840602|ref|ZP_08167083.1| ribonucleoside-diphosphate reductase, beta subunit [Turicibacter
           sp. HGF1]
 gi|292646620|gb|EFF64622.1| ribonucleoside-diphosphate reductase, beta subunit [Turicibacter
           sanguinis PC909]
 gi|325490251|gb|EGC92584.1| ribonucleoside-diphosphate reductase, beta subunit [Turicibacter
           sp. HGF1]
          Length = 321

 Score = 71.0 bits (173), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 57/128 (44%), Gaps = 6/128 (4%)

Query: 39  YGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN 98
           Y +  + YL      W+P E+P+ +D ++W   + L ++ +L  +R LG     ++  + 
Sbjct: 15  YQFYDDLYLKQTEQFWLPEEIPVSEDKSIW---DTLDENIKLTYERILGGLTLLDTEQST 71

Query: 99  NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSIT 156
            I   I     N   +  L   A  E++H+ ++  I  +L   E   ELFN   E   + 
Sbjct: 72  GI-QKIAEKSDNLFIKSILALFAGFESIHARSYSTIFQTLCTTERIEELFNWVEETKPLQ 130

Query: 157 AKANWALQ 164
            K +  ++
Sbjct: 131 EKVDQIMR 138


>gi|324111310|gb|EGC05292.1| ribonucleotide reductase [Escherichia fergusonii B253]
          Length = 319

 Score = 70.6 bits (172), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 54/137 (39%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSAAEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYTWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E  S+  KA    Q+ +
Sbjct: 127 ENASLQRKAQIIQQHYR 143


>gi|322387902|ref|ZP_08061509.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           infantis ATCC 700779]
 gi|321141175|gb|EFX36673.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           infantis ATCC 700779]
          Length = 320

 Score = 70.6 bits (172), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSNQEKDLVGKVFGGLTLLDTMQSETGVN 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           A+   +  P          F E+VH+ ++  I ++L       E+F      P +  KA 
Sbjct: 76  ALRADIRTPHEEAVFNNIQFMESVHAKSYSSIFSTLNTKTEIEEIFEWTDTNPYLQKKAQ 135


>gi|86359305|ref|YP_471197.1| ribonucleotide-diphosphate reductase subunit beta [Rhizobium etli
           CFN 42]
 gi|86283407|gb|ABC92470.1| ribonucleoside-diphosphate reductase, beta subunit protein
           [Rhizobium etli CFN 42]
          Length = 324

 Score = 70.6 bits (172), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 55/144 (38%), Gaps = 5/144 (3%)

Query: 27  ARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNL 86
           +R        ++     E +     N W+P +VP+ +D+  W +   LT  E+ +  R  
Sbjct: 9   SRVRAINWNRIEDDKDLEVWNRLTGNFWLPEKVPLSNDIPSWAT---LTAAEQQLTIRVF 65

Query: 87  GFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGE 144
                 +++      + +      P     L   +F EAVH+ ++  I ++L    D  +
Sbjct: 66  TGLTLLDTIQNGVGAVGLMEDAVTPHEEAVLSNVSFMEAVHARSYSSIFSTLCSTPDVDD 125

Query: 145 LFNMYREVPSITAKANWALQYTQT 168
            +    E   +  K+   ++   +
Sbjct: 126 AYRWSEENEFLQRKSALIMEQYAS 149


>gi|300859086|ref|YP_003784069.1| ribonucleoside-diphosphate reductase subunit beta [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300686540|gb|ADK29462.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302206792|gb|ADL11134.1| Ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           pseudotuberculosis C231]
 gi|302331346|gb|ADL21540.1| Ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           pseudotuberculosis 1002]
 gi|308277038|gb|ADO26937.1| Ribonucleotide reductase, beta subunit [Corynebacterium
           pseudotuberculosis I19]
          Length = 328

 Score = 70.6 bits (172), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 49/126 (38%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +DL  W     L D E+    R        +++      ++
Sbjct: 30  EVWDRLTGNFWLPEKVPVSNDLKSW---GTLNDLEKTTTMRVFTGLTMLDTIQGTVGAVS 86

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANW 161
           +      P         AF E+VH+ ++  I  +L    +  E F    E  ++  KA  
Sbjct: 87  MIPDAITPHEEAVYTNIAFMESVHAKSYSNIFMTLASTKEINEAFRWSEENENLQKKAKI 146

Query: 162 ALQYTQ 167
            L Y +
Sbjct: 147 VLSYYE 152


>gi|328912184|gb|AEB63780.1| ribonucleoside-diphosphate reductase (minor subunit) [Bacillus
           amyloliquefaciens LL3]
          Length = 305

 Score = 70.6 bits (172), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 54/152 (35%), Gaps = 6/152 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            Y       W+P E+ +  DL  WK    L   E+    + L      ++   N  +  +
Sbjct: 2   FYNQNVKQFWLPEEIALNGDLLTWK---YLGTKEQDTYMKVLAGLTLLDTEQGNTGMPIV 58

Query: 105 YRHLSNPECRQYLLRQAFEEA-VHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
             H+   + +  L   A  E  VH+ ++  I  +L   E   E+F   ++   +  KA+ 
Sbjct: 59  AEHVEGHQRKAVLNFMAMMENAVHAKSYSNIFLTLAPTEQINEVFEWVKQNKYLQKKAHT 118

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            +   + +         K   + +   S  F 
Sbjct: 119 VVGLYRAIKKDDEISLFKAMVASVYLESFLFY 150


>gi|218547807|ref|YP_002381598.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia
           fergusonii ATCC 35469]
 gi|218355348|emb|CAQ87955.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           [Escherichia fergusonii ATCC 35469]
          Length = 319

 Score = 70.6 bits (172), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 54/137 (39%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSAAEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYTWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E  S+  KA    Q+ +
Sbjct: 127 ENASLQRKAQIIQQHYR 143


>gi|227494314|ref|ZP_03924630.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces
           coleocanis DSM 15436]
 gi|226832048|gb|EEH64431.1| ribonucleotide-diphosphate reductase subunit beta [Actinomyces
           coleocanis DSM 15436]
          Length = 322

 Score = 70.6 bits (172), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 51/125 (40%), Gaps = 5/125 (4%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P ++P+ +D+  W   N L  +E+ M  +        ++L      ++
Sbjct: 24  EVWDRLTGNFWLPEKIPLSNDIPSW---NTLRPEEQDMTNKVFTNLTLLDTLQGTVGAIS 80

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +      P     L   AF E+VH+ ++  I ++L   +   E+F    E   +  KA  
Sbjct: 81  LISDARTPHEEAVLTNIAFMESVHARSYSSIFSTLLSTQEINEVFRWSEENEQVQRKAEI 140

Query: 162 ALQYT 166
              Y 
Sbjct: 141 VNSYY 145


>gi|240950330|ref|ZP_04754600.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           minor NM305]
 gi|240295141|gb|EER45960.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           minor NM305]
          Length = 326

 Score = 70.6 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 60/142 (42%), Gaps = 7/142 (4%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
              + P +Y    E   +  +++W+ TE     D+  +++   +TD ER ++ R +   A
Sbjct: 10  RLNIKPYEYPELLEFKDAIRHSYWLHTEFNFTGDIQDYRT--TITDHERHVLTRAM--LA 65

Query: 91  SSESLVA-NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY 149
            S+  V        +YR+   PE        A  E  H   + +++  LGL   E+F+  
Sbjct: 66  ISQVEVNVKRFWGELYRYFPKPEMDDVGGTFAESEVRHKDAYSFLLEKLGL--NEMFSQI 123

Query: 150 REVPSITAKANWALQYTQTLSS 171
           +++  +  +  +   + +   +
Sbjct: 124 QDIEPLMNRIRYMESFMKDKDA 145


>gi|221309910|ref|ZP_03591757.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|221314233|ref|ZP_03596038.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. subtilis str. NCIB 3610]
 gi|221319156|ref|ZP_03600450.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. subtilis str. JH642]
 gi|221323429|ref|ZP_03604723.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           subtilis subsp. subtilis str. SMY]
          Length = 195

 Score = 70.6 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 6/152 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            Y       W+P E+ +  DL  WK    L  +E+    + L      ++   N  +  +
Sbjct: 21  FYNQNVKQFWLPEEIALNGDLLTWK---YLGKNEQDTYMKVLAGLTLLDTEQGNTGMPIV 77

Query: 105 YRHLSNPECRQYLLRQAFEEA-VHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
             H+   + +  L   A  E  VH+ ++  I  +L   E   E+F   +    +  KA  
Sbjct: 78  AEHVDGHQRKAVLNFMAMMENAVHAKSYSNIFLTLAPTEQINEVFEWVKNNRFLQKKART 137

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            +   +T+         K   + +   S  F 
Sbjct: 138 IVSVYKTIKKNDEISLFKGMVASVFLESFLFY 169


>gi|22125124|ref|NP_668547.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           KIM 10]
 gi|45442235|ref|NP_993774.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           biovar Microtus str. 91001]
 gi|51597273|ref|YP_071464.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           pseudotuberculosis IP 32953]
 gi|108808370|ref|YP_652286.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Antiqua]
 gi|108811297|ref|YP_647064.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Nepal516]
 gi|145598906|ref|YP_001162982.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Pestoides F]
 gi|149365457|ref|ZP_01887492.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pestis
           CA88-4125]
 gi|162420024|ref|YP_001607865.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           Angola]
 gi|165925252|ref|ZP_02221084.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165939901|ref|ZP_02228439.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166008124|ref|ZP_02229022.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166212554|ref|ZP_02238589.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167398943|ref|ZP_02304467.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167421281|ref|ZP_02313034.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167423716|ref|ZP_02315469.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|167468720|ref|ZP_02333424.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           FV-1]
 gi|170023362|ref|YP_001719867.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           pseudotuberculosis YPIII]
 gi|186896377|ref|YP_001873489.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia
           pseudotuberculosis PB1/+]
 gi|218929725|ref|YP_002347600.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           CO92]
 gi|229838202|ref|ZP_04458361.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229895452|ref|ZP_04510624.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Yersinia pestis Pestoides A]
 gi|229898686|ref|ZP_04513831.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229901543|ref|ZP_04516665.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pestis
           Nepal516]
 gi|270489729|ref|ZP_06206803.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           KIM D27]
 gi|294504447|ref|YP_003568509.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
           Z176003]
 gi|21957983|gb|AAM84798.1|AE013726_1 ribonucleoside-diphosphate reductase 2, beta chain, frag [Yersinia
           pestis KIM 10]
 gi|45437099|gb|AAS62651.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pestis
           biovar Microtus str. 91001]
 gi|51590555|emb|CAH22196.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia
           pseudotuberculosis IP 32953]
 gi|108774945|gb|ABG17464.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Yersinia pestis Nepal516]
 gi|108780283|gb|ABG14341.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Yersinia pestis Antiqua]
 gi|115348336|emb|CAL21269.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pestis
           CO92]
 gi|145210602|gb|ABP40009.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Yersinia pestis Pestoides F]
 gi|149291870|gb|EDM41944.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pestis
           CA88-4125]
 gi|162352839|gb|ABX86787.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           Angola]
 gi|165912120|gb|EDR30759.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165922859|gb|EDR40010.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165992506|gb|EDR44807.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166206485|gb|EDR50965.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166960770|gb|EDR56791.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167051447|gb|EDR62855.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167057886|gb|EDR67632.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|169749896|gb|ACA67414.1| Ribonucleoside-diphosphate reductase [Yersinia pseudotuberculosis
           YPIII]
 gi|186699403|gb|ACC90032.1| ribonucleotide reductase [Yersinia pseudotuberculosis PB1/+]
 gi|229681472|gb|EEO77566.1| ribonucleoside-diphosphate reductase 2 beta chain [Yersinia pestis
           Nepal516]
 gi|229688234|gb|EEO80305.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229694568|gb|EEO84615.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229701607|gb|EEO89634.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Yersinia pestis Pestoides A]
 gi|262362562|gb|ACY59283.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
           D106004]
 gi|262366433|gb|ACY62990.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
           D182038]
 gi|270338233|gb|EFA49010.1| ribonucleoside-diphosphate reductase, beta subunit [Yersinia pestis
           KIM D27]
 gi|294354906|gb|ADE65247.1| ribonucleotide-diphosphate reductase beta subunit [Yersinia pestis
           Z176003]
 gi|320016142|gb|ADV99713.1| ribonucleotide-diphosphate reductase subunit beta [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 323

 Score = 70.6 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 55/138 (39%), Gaps = 5/138 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +D+  W +   LT  E+ +  R        
Sbjct: 14  NWNKIEDDKDLEVWNRLTSNFWLPEKVPLSNDIPSWAT---LTPHEQQLTIRVFTGLTLL 70

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYR 150
           +++       A+ +    P         +F EAVH+ ++  I ++L L  D  + +    
Sbjct: 71  DTIQNTLGAPALIKDAITPHEEAIFSNISFMEAVHARSYSSIFSTLCLTSDVDDAYRWSE 130

Query: 151 EVPSITAKANWALQYTQT 168
           +   +  KA+   Q+   
Sbjct: 131 DNGPLQKKADIISQHYHN 148


>gi|289606667|emb|CBI61081.1| unnamed protein product [Sordaria macrospora]
          Length = 59

 Score = 70.6 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)

Query: 31 VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
            Q  P +Y WA++ +      HWMP EVP+ +D   W  K  LT  ER ++ + 
Sbjct: 7  RKQYKPFEYPWAFDFWKRQQQIHWMPEEVPLGEDCRDWAQK--LTPHERNLLTQI 59


>gi|209551073|ref|YP_002282990.1| ribonucleotide-diphosphate reductase subunit beta [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209536829|gb|ACI56764.1| Ribonucleoside-diphosphate reductase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 324

 Score = 70.6 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 51/134 (38%), Gaps = 5/134 (3%)

Query: 27  ARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNL 86
           +R        ++     E +     N W+P +VP+ +D+  W +   LT  E+ +  R  
Sbjct: 9   SRVRAINWNRIEDDKDLEVWNRLTGNFWLPEKVPLSNDIPSWAT---LTAAEQQLTIRVF 65

Query: 87  GFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGE 144
                 +++      + +      P     L   +F EAVH+ ++  I ++L    D  +
Sbjct: 66  TGLTLLDTIQNGVGAVGLMEDAVTPHEEAVLSNVSFMEAVHARSYSSIFSTLCSTPDVDD 125

Query: 145 LFNMYREVPSITAK 158
            +    E   +  K
Sbjct: 126 AYRWSEENEFLQRK 139


>gi|218663032|ref|ZP_03518962.1| ribonucleotide-diphosphate reductase subunit beta [Rhizobium etli
           IE4771]
          Length = 324

 Score = 70.6 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 51/134 (38%), Gaps = 5/134 (3%)

Query: 27  ARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNL 86
           +R        ++     E +     N W+P +VP+ +D+  W +   LT  E+ +  R  
Sbjct: 9   SRVRAINWNRIEDDRDLEVWNRLTGNFWLPEKVPLSNDIPSWAT---LTAAEQQLTIRVF 65

Query: 87  GFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGE 144
                 +++      + +      P     L   +F EAVH+ ++  I ++L    D  +
Sbjct: 66  TGLTLLDTIQNGVGSIRLMEDAVTPHEEAVLSNVSFMEAVHARSYSSIFSTLCSTPDVDD 125

Query: 145 LFNMYREVPSITAK 158
            +    E   +  K
Sbjct: 126 AYRWSEENEFLQRK 139


>gi|237785987|ref|YP_002906692.1| ribonucleoside-diphosphate reductase subunit beta [Corynebacterium
           kroppenstedtii DSM 44385]
 gi|237758899|gb|ACR18149.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           kroppenstedtii DSM 44385]
          Length = 336

 Score = 70.6 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 49/126 (38%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W + N L   E+    R        +++      ++
Sbjct: 38  EVWDRLTGNFWLPEKVPLSNDIKSWGTLNEL---EQRTTMRVFTGLTMLDTIQGTVGAVS 94

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +      P         AF E+VH+ ++  I  +L       + F    E  ++  KA  
Sbjct: 95  LIPDALTPHEEAVYTNIAFMESVHARSYSSIFMTLSSTPEINDAFRWSEENENLQDKARI 154

Query: 162 ALQYTQ 167
            L Y +
Sbjct: 155 VLDYYE 160


>gi|257464834|ref|ZP_05629205.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           minor 202]
 gi|257450494|gb|EEV24537.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           minor 202]
          Length = 326

 Score = 70.6 bits (172), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 60/142 (42%), Gaps = 7/142 (4%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
              + P +Y    E   +  +++W+ TE     D+  +++   +TD ER ++ R +   A
Sbjct: 10  RLNIKPYEYPELLEFKDAIRHSYWLHTEFNFTGDIQDYRT--TITDHERHVLTRAM--LA 65

Query: 91  SSESLVA-NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY 149
            S+  V        +YR+   PE        A  E  H   + +++  LGL   E+F+  
Sbjct: 66  ISQVEVNVKRFWGELYRYFPKPEMDDVGGTFAESEVRHKDAYSFLLEKLGL--NEMFSQI 123

Query: 150 REVPSITAKANWALQYTQTLSS 171
           +++  +  +  +   + +   +
Sbjct: 124 QDIEPLMNRIRYMESFMKDKDA 145


>gi|283786769|ref|YP_003366634.1| ribonucleoside-diphosphate reductase 2 beta chain [Citrobacter
           rodentium ICC168]
 gi|282950223|emb|CBG89859.1| ribonucleoside-diphosphate reductase 2 beta chain [Citrobacter
           rodentium ICC168]
          Length = 319

 Score = 70.3 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 56/149 (37%), Gaps = 5/149 (3%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           M  +R        ++     E +    +N W+P +VP+ +D+  W+S   L   E+ +  
Sbjct: 1   MTLSRVSAINWNKIQDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQS---LNAAEQQLTI 57

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLD 141
           R        +++       ++      P     L   +F EAVH+ ++  I ++L    D
Sbjct: 58  RVFTGLTLLDTIQNIAGAPSLMADALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTRD 117

Query: 142 EGELFNMYREVPSITAKANWALQYTQTLS 170
               +    E   +  KA   L +  +  
Sbjct: 118 VDAAYAWSEENAPLQRKAQIILAHYASDE 146


>gi|153010278|ref|YP_001371492.1| ribonucleotide-diphosphate reductase subunit beta [Ochrobactrum
           anthropi ATCC 49188]
 gi|151562166|gb|ABS15663.1| Ribonucleoside-diphosphate reductase [Ochrobactrum anthropi ATCC
           49188]
          Length = 328

 Score = 70.3 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 50/128 (39%), Gaps = 5/128 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +     N W+P +VP+ +D+  W++   L   E+ +  R        
Sbjct: 19  NWNRIEDEKDLEVWNRLTGNFWLPEKVPLSNDIQSWET---LKPQEKQLTIRVFTGLTLL 75

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS--LGLDEGELFNMYR 150
           +++      + +    + P     L   +F EAVH+ ++  I ++  L  D  + +    
Sbjct: 76  DTIQNAVGAVKLMDDAATPHEEAVLSNISFMEAVHARSYSSIFSTLCLTPDVDDAYRWSE 135

Query: 151 EVPSITAK 158
           E   +  K
Sbjct: 136 ENEFLQRK 143


>gi|183598095|ref|ZP_02959588.1| hypothetical protein PROSTU_01459 [Providencia stuartii ATCC 25827]
 gi|188020253|gb|EDU58293.1| hypothetical protein PROSTU_01459 [Providencia stuartii ATCC 25827]
          Length = 323

 Score = 70.3 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 54/136 (39%), Gaps = 5/136 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +     N W+P ++P+ +D++ W   N LT  E+ +  R        
Sbjct: 14  NWNRIEDDKDLEVWNRLTTNFWLPEKIPLSNDISSW---NTLTAAEQQLTIRVFTGLTLL 70

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++       ++      P     L   +F EAVH+ ++  I ++L    D  + +    
Sbjct: 71  DTIQNTVGAPSLMSDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCSTSDVDDAYRWSE 130

Query: 151 EVPSITAKANWALQYT 166
           E  ++  KA   + Y 
Sbjct: 131 ENSALQNKAKIIMSYY 146


>gi|156086328|ref|XP_001610573.1| ribonucleoside-diphosphate reductase beta subunit [Babesia bovis
           T2Bo]
 gi|154797826|gb|EDO07005.1| ribonucleoside-diphosphate reductase beta subunit, putative
           [Babesia bovis]
          Length = 329

 Score = 70.3 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 55/151 (36%), Gaps = 14/151 (9%)

Query: 17  VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTD 76
           +   ++ +L   ++   + P+ Y   W  Y    N+ W   +           + + L  
Sbjct: 16  LEQHNETLLKENANRWVMFPIHYDALWAMYKEIENSFWAAEDFRFA---NERDTYSSLPT 72

Query: 77  DERLMIKRNLGFFASSE-SLVAN--NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           + R ++ + + +    + S VA    I L +      PE R +   Q   E +HS  F  
Sbjct: 73  ELRQLVVKLISYHNRLDRSEVARPATITLDLLADTQIPEARAFYGFQVSYENIHSELFGI 132

Query: 134 IITSLGLDEGELFNMYREVPSITAKANWALQ 164
           + +++            +VP   AK  W  +
Sbjct: 133 MSSAIP--------GTIDVPEADAKIEWLTR 155


>gi|304445906|pdb|3MJO|A Chain A, Small Subunit (R2f) Of Native Ribonucleotide Reductase
           From Corynebacterium Ammoniagenes
 gi|304445907|pdb|3MJO|B Chain B, Small Subunit (R2f) Of Native Ribonucleotide Reductase
           From Corynebacterium Ammoniagenes
          Length = 296

 Score = 70.3 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 48/126 (38%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P ++P+ +D+  W   N +T  E+L   R        +++      ++
Sbjct: 30  EVWDRLTGNFWLPEKIPVSNDIQSW---NKMTPQEQLATMRVFTGLTLLDTIQGTVGAIS 86

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +                AF E+VH+ ++  I  +L       E F    E  ++  KA  
Sbjct: 87  LLPDAETMHEEAVYTNIAFMESVHAKSYSNIFMTLASTPQINEAFRWSEENENLQRKAKI 146

Query: 162 ALQYTQ 167
            + Y  
Sbjct: 147 IMSYYN 152


>gi|31793160|ref|NP_855653.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           bovis AF2122/97]
 gi|224990358|ref|YP_002645045.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium
           bovis BCG str. Tokyo 172]
 gi|260205258|ref|ZP_05772749.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis K85]
 gi|289574653|ref|ZP_06454880.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis K85]
 gi|31618751|emb|CAD94705.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF1
           (RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT) (R2F PROTEIN)
           [Mycobacterium bovis AF2122/97]
 gi|224773471|dbj|BAH26277.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium
           bovis BCG str. Tokyo 172]
 gi|289539084|gb|EFD43662.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis K85]
          Length = 322

 Score = 70.3 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 55/126 (43%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           + +     N W+P ++P+ +DLA W++   L+  E+    R        ++  A    +A
Sbjct: 24  QVWERLTGNFWLPEKIPLSNDLASWQT---LSSTEQQTTIRVFTGLTLLDTAQATVGAVA 80

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +      P     L   AF E+VH+ ++  I ++L   +   + F+   + P +  KA  
Sbjct: 81  MIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDDAFDWSEQNPYLQRKAQI 140

Query: 162 ALQYTQ 167
            + Y +
Sbjct: 141 IVDYYR 146


>gi|15841457|ref|NP_336494.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis CDC1551]
 gi|57116932|ref|YP_177853.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis H37Rv]
 gi|148661790|ref|YP_001283313.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis H37Ra]
 gi|148823195|ref|YP_001287949.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis F11]
 gi|167970496|ref|ZP_02552773.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis H37Ra]
 gi|215404217|ref|ZP_03416398.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 02_1987]
 gi|215411671|ref|ZP_03420467.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 94_M4241A]
 gi|215427336|ref|ZP_03425255.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T92]
 gi|215430897|ref|ZP_03428816.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis EAS054]
 gi|215446189|ref|ZP_03432941.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T85]
 gi|218753694|ref|ZP_03532490.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis GM 1503]
 gi|219557941|ref|ZP_03537017.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T17]
 gi|253798971|ref|YP_003031972.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis KZN 1435]
 gi|254232151|ref|ZP_04925478.1| ribonucleoside-diphosphate reductase (beta chain) nrdF1
           [Mycobacterium tuberculosis C]
 gi|254364798|ref|ZP_04980844.1| ribonucleoside-diphosphate reductase (beta chain) nrdF1
           [Mycobacterium tuberculosis str. Haarlem]
 gi|254551002|ref|ZP_05141449.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis '98-R604 INH-RIF-EM']
 gi|260186953|ref|ZP_05764427.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis CPHL_A]
 gi|260201080|ref|ZP_05768571.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T46]
 gi|289443470|ref|ZP_06433214.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
           tuberculosis T46]
 gi|289447597|ref|ZP_06437341.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis CPHL_A]
 gi|289554242|ref|ZP_06443452.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis KZN 605]
 gi|289570077|ref|ZP_06450304.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis T17]
 gi|289746076|ref|ZP_06505454.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 02_1987]
 gi|289750559|ref|ZP_06509937.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis T92]
 gi|289754082|ref|ZP_06513460.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis EAS054]
 gi|289758093|ref|ZP_06517471.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T85]
 gi|289762136|ref|ZP_06521514.1| ribonucleoside-diphosphate reductase (beta chain) nrdF1
           [Mycobacterium tuberculosis GM 1503]
 gi|294996911|ref|ZP_06802602.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 210]
 gi|297634550|ref|ZP_06952330.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis KZN 4207]
 gi|297731538|ref|ZP_06960656.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis KZN R506]
 gi|298525478|ref|ZP_07012887.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 94_M4241A]
 gi|306776213|ref|ZP_07414550.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu001]
 gi|306779994|ref|ZP_07418331.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu002]
 gi|306784744|ref|ZP_07423066.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu003]
 gi|306789101|ref|ZP_07427423.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu004]
 gi|306793436|ref|ZP_07431738.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu005]
 gi|306797819|ref|ZP_07436121.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu006]
 gi|306803700|ref|ZP_07440368.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu008]
 gi|306808274|ref|ZP_07444942.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu007]
 gi|306968097|ref|ZP_07480758.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu009]
 gi|306972322|ref|ZP_07484983.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu010]
 gi|307080033|ref|ZP_07489203.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu011]
 gi|307084607|ref|ZP_07493720.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu012]
 gi|313658871|ref|ZP_07815751.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis KZN V2475]
 gi|1710397|sp|Q10840|RIR2A_MYCTU RecName: Full=Ribonucleoside-diphosphate reductase subunit beta
           nrdF1; AltName: Full=Ribonucleotide reductase R2-1 small
           subunit; AltName: Full=Ribonucleotide reductase small
           subunit 1
 gi|13881697|gb|AAK46308.1| ribonucleoside-diphosphate reductase R2-1, beta subunit
           [Mycobacterium tuberculosis CDC1551]
 gi|38490297|emb|CAE55444.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF1
           (RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT) (R2F PROTEIN)
           [Mycobacterium tuberculosis H37Rv]
 gi|124601210|gb|EAY60220.1| ribonucleoside-diphosphate reductase (beta chain) nrdF1
           [Mycobacterium tuberculosis C]
 gi|134150312|gb|EBA42357.1| ribonucleoside-diphosphate reductase (beta chain) nrdF1
           [Mycobacterium tuberculosis str. Haarlem]
 gi|148505942|gb|ABQ73751.1| ribonucleoside-diphosphate reductase subunit beta NrdF1
           [Mycobacterium tuberculosis H37Ra]
 gi|148721722|gb|ABR06347.1| ribonucleoside-diphosphate reductase beta subunit nrdF1
           [Mycobacterium tuberculosis F11]
 gi|253320474|gb|ACT25077.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis KZN 1435]
 gi|289416389|gb|EFD13629.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
           tuberculosis T46]
 gi|289420555|gb|EFD17756.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis CPHL_A]
 gi|289438874|gb|EFD21367.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis KZN 605]
 gi|289543831|gb|EFD47479.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis T17]
 gi|289686604|gb|EFD54092.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 02_1987]
 gi|289691146|gb|EFD58575.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis T92]
 gi|289694669|gb|EFD62098.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis EAS054]
 gi|289709642|gb|EFD73658.1| ribonucleoside-diphosphate reductase (beta chain) nrdF1
           [Mycobacterium tuberculosis GM 1503]
 gi|289713657|gb|EFD77669.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T85]
 gi|298495272|gb|EFI30566.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 94_M4241A]
 gi|308215325|gb|EFO74724.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu001]
 gi|308327098|gb|EFP15949.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu002]
 gi|308330477|gb|EFP19328.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu003]
 gi|308334311|gb|EFP23162.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu004]
 gi|308338113|gb|EFP26964.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu005]
 gi|308341805|gb|EFP30656.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu006]
 gi|308345291|gb|EFP34142.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu007]
 gi|308349595|gb|EFP38446.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu008]
 gi|308354222|gb|EFP43073.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu009]
 gi|308358200|gb|EFP47051.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu010]
 gi|308362132|gb|EFP50983.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu011]
 gi|308365786|gb|EFP54637.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis SUMu012]
 gi|323719468|gb|EGB28595.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis CDC1551A]
 gi|326903590|gb|EGE50523.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis W-148]
 gi|328458726|gb|AEB04149.1| ribonucleoside-diphosphate reductase subunit beta nrdF1
           [Mycobacterium tuberculosis KZN 4207]
          Length = 322

 Score = 70.3 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 55/126 (43%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           + +     N W+P ++P+ +DLA W++   L+  E+    R        ++  A    +A
Sbjct: 24  QVWERLTGNFWLPEKIPLSNDLASWQT---LSSTEQQTTIRVFTGLTLLDTAQATVGAVA 80

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +      P     L   AF E+VH+ ++  I ++L   +   + F+   + P +  KA  
Sbjct: 81  MIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDDAFDWSEQNPYLQRKAQI 140

Query: 162 ALQYTQ 167
            + Y +
Sbjct: 141 IVDYYR 146


>gi|319947340|ref|ZP_08021573.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           australis ATCC 700641]
 gi|319746582|gb|EFV98842.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           australis ATCC 700641]
          Length = 319

 Score = 70.3 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGVQ 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           A+   +  P          F E+VH+ ++  I ++L       E+F      P +  KA 
Sbjct: 76  ALRADIRTPHEEAVFNNIQFMESVHAKSYSSIFSTLNTKSEIEEIFEWTNTNPFLQKKAE 135


>gi|18158911|pdb|1KGN|A Chain A, R2f From Corynebacterium Ammoniagenes In Its Oxidised, Fe
           Containing, Form
 gi|18158912|pdb|1KGN|B Chain B, R2f From Corynebacterium Ammoniagenes In Its Oxidised, Fe
           Containing, Form
 gi|18158913|pdb|1KGN|C Chain C, R2f From Corynebacterium Ammoniagenes In Its Oxidised, Fe
           Containing, Form
 gi|18158914|pdb|1KGN|D Chain D, R2f From Corynebacterium Ammoniagenes In Its Oxidised, Fe
           Containing, Form
 gi|18158915|pdb|1KGO|A Chain A, R2f From Corynebacterium Ammoniagenes In Its Reduced, Fe
           Containing, Form
 gi|18158916|pdb|1KGO|B Chain B, R2f From Corynebacterium Ammoniagenes In Its Reduced, Fe
           Containing, Form
 gi|18158917|pdb|1KGO|C Chain C, R2f From Corynebacterium Ammoniagenes In Its Reduced, Fe
           Containing, Form
 gi|18158918|pdb|1KGO|D Chain D, R2f From Corynebacterium Ammoniagenes In Its Reduced, Fe
           Containing, Form
 gi|18158919|pdb|1KGP|A Chain A, R2f From Corynebacterium Ammoniagenes In Its Mn
           Substituted Form
 gi|18158920|pdb|1KGP|B Chain B, R2f From Corynebacterium Ammoniagenes In Its Mn
           Substituted Form
 gi|18158921|pdb|1KGP|C Chain C, R2f From Corynebacterium Ammoniagenes In Its Mn
           Substituted Form
 gi|18158922|pdb|1KGP|D Chain D, R2f From Corynebacterium Ammoniagenes In Its Mn
           Substituted Form
 gi|48425146|pdb|1OQU|A Chain A, A Protein Coordinated Tri-Nuclear Fe Complex Formed During
           Soaking Of Crystals Of The Ribonucleotide Reductase R2f
           Protein From Corynebacterium Ammoniagenes
 gi|48425147|pdb|1OQU|B Chain B, A Protein Coordinated Tri-Nuclear Fe Complex Formed During
           Soaking Of Crystals Of The Ribonucleotide Reductase R2f
           Protein From Corynebacterium Ammoniagenes
 gi|48425148|pdb|1OQU|C Chain C, A Protein Coordinated Tri-Nuclear Fe Complex Formed During
           Soaking Of Crystals Of The Ribonucleotide Reductase R2f
           Protein From Corynebacterium Ammoniagenes
 gi|48425149|pdb|1OQU|D Chain D, A Protein Coordinated Tri-Nuclear Fe Complex Formed During
           Soaking Of Crystals Of The Ribonucleotide Reductase R2f
           Protein From Corynebacterium Ammoniagenes
 gi|193506844|pdb|3DHZ|A Chain A, Apo (Iron Free) Structure Of C. Ammoniagenes R2 Protein
 gi|193506845|pdb|3DHZ|B Chain B, Apo (Iron Free) Structure Of C. Ammoniagenes R2 Protein
 gi|3077614|emb|CAA70766.1| ribonucleotide reductase subunit R2F [Corynebacterium ammoniagenes]
          Length = 329

 Score = 70.3 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 48/126 (38%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P ++P+ +D+  W   N +T  E+L   R        +++      ++
Sbjct: 31  EVWDRLTGNFWLPEKIPVSNDIQSW---NKMTPQEQLATMRVFTGLTLLDTIQGTVGAIS 87

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +                AF E+VH+ ++  I  +L       E F    E  ++  KA  
Sbjct: 88  LLPDAETMHEEAVYTNIAFMESVHAKSYSNIFMTLASTPQINEAFRWSEENENLQRKAKI 147

Query: 162 ALQYTQ 167
            + Y  
Sbjct: 148 IMSYYN 153


>gi|322389171|ref|ZP_08062732.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           parasanguinis ATCC 903]
 gi|321144076|gb|EFX39493.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           parasanguinis ATCC 903]
          Length = 321

 Score = 70.3 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V 
Sbjct: 24  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGVQ 77

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           A+   +  P          F E+VH+ ++  I ++L       E+F      P +  KA 
Sbjct: 78  ALRADIRTPHEEAVFNNIQFMESVHAKSYSSIFSTLNTKSEIEEIFEWTNTNPFLQKKAE 137


>gi|292489180|ref|YP_003532067.1| ribonucleoside-diphosphate reductase 2 subunit beta [Erwinia
           amylovora CFBP1430]
 gi|292900297|ref|YP_003539666.1| ribonucleoside-diphosphate reductase 2 subunit beta [Erwinia
           amylovora ATCC 49946]
 gi|291200145|emb|CBJ47271.1| ribonucleoside-diphosphate reductase 2 beta chain [Erwinia
           amylovora ATCC 49946]
 gi|291554614|emb|CBA22274.1| ribonucleoside-diphosphate reductase 2 beta chain [Erwinia
           amylovora CFBP1430]
          Length = 319

 Score = 70.3 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 54/134 (40%), Gaps = 5/134 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +D+  W   N L+ DE+ +  R        
Sbjct: 10  NWNKIEDDKDLEVWNRLTSNFWLPEKVPLSNDIPSW---NSLSADEQQLTIRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++       A+      P     +   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTIQNTLGAPALMADALTPHEEAVMSNISFMEAVHARSYSSIFSTLCHTSDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQ 164
           +   + AKA   LQ
Sbjct: 127 DNAPLQAKAQIILQ 140


>gi|255324325|ref|ZP_05365446.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           tuberculostearicum SK141]
 gi|255298655|gb|EET77951.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           tuberculostearicum SK141]
          Length = 329

 Score = 70.3 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 50/126 (39%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +DL  WK+   LT+ E+    R        +++      ++
Sbjct: 31  EVWDRLTGNFWLPEKVPVSNDLPSWKT---LTEKEKETTMRVFTGLTLLDTIQGTVGAIS 87

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +                AF E+VH+ ++  I  +L       + F    E  ++  KA  
Sbjct: 88  LLPDSQTLHEEAVYTNIAFMESVHAKSYSNIFMTLASTPMINDAFRWSEENENLQKKAKI 147

Query: 162 ALQYTQ 167
            L Y +
Sbjct: 148 ILSYYK 153


>gi|15827930|ref|NP_302193.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           leprae TN]
 gi|221230407|ref|YP_002503823.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           leprae Br4923]
 gi|14195114|sp|Q9CBQ2|RIR2_MYCLE RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|13093483|emb|CAC30684.1| ribonucleotide reductase small subunit [Mycobacterium leprae]
 gi|219933514|emb|CAR71826.1| ribonucleotide reductase small subunit [Mycobacterium leprae
           Br4923]
          Length = 325

 Score = 70.3 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 54/137 (39%), Gaps = 12/137 (8%)

Query: 40  GWAW-------EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
            W W       E +     N W+P +VP+ +DL  W     LT  E+ +  R        
Sbjct: 16  NWNWLQDDKDAEVWDRLTGNFWLPEKVPVSNDLPSW---GTLTASEKQLTMRVFTGLTLL 72

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++      +++      P         AF E+VH+ ++  I ++L    +  E F    
Sbjct: 73  DTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIFSTLCSTAEIDEAFRWSE 132

Query: 151 EVPSITAKANWALQYTQ 167
           E  ++  KA   ++Y +
Sbjct: 133 ENNNLQRKAKIVMEYYR 149


>gi|311741200|ref|ZP_07715024.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           pseudogenitalium ATCC 33035]
 gi|311303370|gb|EFQ79449.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           pseudogenitalium ATCC 33035]
          Length = 329

 Score = 70.3 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 50/126 (39%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +DL  WK+   LT+ E+    R        +++      ++
Sbjct: 31  EVWDRLTGNFWLPEKVPVSNDLPSWKT---LTEKEKETTMRVFTGLTLLDTIQGTVGAIS 87

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +                AF E+VH+ ++  I  +L       + F    E  ++  KA  
Sbjct: 88  LLPDSQTLHEEAVYTNIAFMESVHAKSYSNIFMTLASTPMINDAFRWSEENENLQKKAKI 147

Query: 162 ALQYTQ 167
            L Y +
Sbjct: 148 ILSYYK 153


>gi|1395207|gb|AAB81405.1| ribonucleotide reductase R2-1 small subunit [Mycobacterium
           tuberculosis str. Erdman]
          Length = 321

 Score = 70.3 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 55/126 (43%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           + +     N W+P ++P+ +DLA W++   L+  E+    R        ++  A    +A
Sbjct: 24  QVWERLTGNFWLPEKIPLSNDLASWQT---LSSTEQQTTIRVFTGLTLLDTAQATVGAVA 80

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +      P     L   AF E+VH+ ++  I ++L   +   + F+   + P +  KA  
Sbjct: 81  MIDDAVTPHEEAVLTNMAFMESVHAKSYSSIFSTLCSTKQIDDAFDWSEQNPYLQRKAQI 140

Query: 162 ALQYTQ 167
            + Y +
Sbjct: 141 IVDYYR 146


>gi|322391986|ref|ZP_08065450.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           peroris ATCC 700780]
 gi|321145212|gb|EFX40609.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           peroris ATCC 700780]
          Length = 320

 Score = 70.3 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 53/128 (41%), Gaps = 8/128 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGVN 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           A+   +  P          F E+VH+ ++  I ++L       E+F      P +  KA 
Sbjct: 76  ALRADIRTPHEEAVFNNIQFMESVHAKSYSSIFSTLNTKSEIEEIFEWTDTNPYLQKKAQ 135

Query: 161 WALQYTQT 168
              +  Q 
Sbjct: 136 IINEIYQN 143


>gi|296876816|ref|ZP_06900864.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           parasanguinis ATCC 15912]
 gi|296432318|gb|EFH18117.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           parasanguinis ATCC 15912]
          Length = 321

 Score = 70.3 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V 
Sbjct: 24  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGVQ 77

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           A+   +  P          F E+VH+ ++  I ++L       E+F      P +  KA 
Sbjct: 78  ALRADIRTPHEEAVFNNIQFMESVHAKSYSSIFSTLNTKSEIEEIFEWTNTNPFLQKKAE 137


>gi|9629834|ref|NP_045318.1| ribonucleotide reductase subunit 2 [Bovine herpesvirus 1]
 gi|266916|sp|Q01319|RIR2_BHV1C RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|330772|gb|AAA46063.1| ribonucleotide reductase small subunit [Bovine herpesvirus 1]
 gi|995642|emb|CAA90928.1| UL40 [Bovine herpesvirus 1]
 gi|1149578|emb|CAA88899.1| UL40 [Bovine herpesvirus 1]
 gi|2653307|emb|CAA06093.1| ribonucleotide reductase small subunit [Bovine herpesvirus type
           1.1]
          Length = 314

 Score = 70.3 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 53/146 (36%), Gaps = 16/146 (10%)

Query: 38  KYGWAWE--------KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           KY + +E            +  N W+ TE P+ DD         L+  E    +    F 
Sbjct: 13  KYKYFYETECPDLDHLRSLSVANRWLETEFPLADDAKD---VARLSGAELEFYRFLFAFL 69

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY 149
           ++++ LV  N+   +    +  +   Y + Q   E VHS  +  I   L  ++      Y
Sbjct: 70  SAADDLVNVNLGD-LSELFTQKDILHYYIEQESIEVVHSRVYSAIQLLLFRNDAVARAGY 128

Query: 150 RE----VPSITAKANWALQYTQTLSS 171
            E     P++  K +W  +      S
Sbjct: 129 VEGALGDPAVRRKVDWLERRVAAAES 154


>gi|328543067|ref|YP_004303176.1| Ribonucleoside-diphosphate reductase, beta subunit [Polymorphum
           gilvum SL003B-26A1]
 gi|326412813|gb|ADZ69876.1| Ribonucleoside-diphosphate reductase, beta subunit [Polymorphum
           gilvum SL003B-26A1]
          Length = 325

 Score = 70.3 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 59/161 (36%), Gaps = 7/161 (4%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
            D      L+     E +     N W+P +VP+ +D+  W +   LT  E+ +  R    
Sbjct: 11  PDAVNWNRLRDPKDLEIWNRLTVNFWLPEKVPLSNDIPSWAT---LTAAEQQLTIRVFTG 67

Query: 89  FASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNM 148
               +++       A+      P     L   AF EAVH+ ++  + ++L     E+ + 
Sbjct: 68  LTLLDTIQNMIGAPALMADAITPHEEAVLTNIAFMEAVHARSYSSVFSTLCR-TAEVDDA 126

Query: 149 YR---EVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRIL 186
           +R   E P + AK+   L       +P             L
Sbjct: 127 FRWSAENPQLQAKSRLILNEYDASGTPLKKKIASVFLESFL 167


>gi|328553048|gb|AEB23540.1| ribonucleotide-diphosphate reductase subunit beta [Bacillus
           amyloliquefaciens TA208]
          Length = 195

 Score = 70.3 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 53/152 (34%), Gaps = 7/152 (4%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            Y       W+P E+ +  DL  WK    L  +E+    + L      ++   N  +  +
Sbjct: 21  FYNQNVKQFWLPEEIALNGDLLTWK---YLGKNEQDTYMKVLAGLTLLDTEQGNTGMPIV 77

Query: 105 YRHLSNPECRQYLLRQAFEEA-VHSHTFQYIITSLGLDEG--ELFNMYREVPSITAKAN- 160
             H+   + +  L   A  E  VH+ ++  I  +L   E   E+F   +    +  KA  
Sbjct: 78  AEHVEGHQRKAVLNFMAMMENAVHAKSYSNIFLTLAPTEKINEVFEWVKNNRFLQKKART 137

Query: 161 WALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             L Y     +     +     S  L   L +
Sbjct: 138 IVLIYKAVQKNDDISLFKAMVASVFLESFLFY 169


>gi|310816082|ref|YP_003964046.1| ribonucleoside-diphosphate reductase, beta subunit
           [Ketogulonicigenium vulgare Y25]
 gi|308754817|gb|ADO42746.1| ribonucleoside-diphosphate reductase, beta subunit
           [Ketogulonicigenium vulgare Y25]
          Length = 317

 Score = 70.3 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 57/151 (37%), Gaps = 9/151 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +    +N W+P +VP+ +D+  W S    T+ E+ +  R        +++ +     A
Sbjct: 18  EIWNRLTSNFWLPEKVPLSNDIQSWSSF---TEAEKQLTIRVFTGLTLLDTIQSKAGAPA 74

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYREVPSITAKANW 161
           + +    P          F EAVH+ ++  I ++L    +  E F        +  KA  
Sbjct: 75  LMKDALTPHEEAVFANICFMEAVHARSYSSIFSTLCTTVEIDEAFRWAELNKDLQRKA-- 132

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             +  +   +       K+  S  L   + +
Sbjct: 133 --KLIEACYTDDTQPLKKKIASVFLESFMFY 161


>gi|296118681|ref|ZP_06837257.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           ammoniagenes DSM 20306]
 gi|295968170|gb|EFG81419.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           ammoniagenes DSM 20306]
          Length = 329

 Score = 70.3 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 48/126 (38%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P ++P+ +D+  WK    +T  E+    R        +++      ++
Sbjct: 31  EVWDRLTGNFWLPEKIPVSNDIQSWKK---MTPQEQQATMRVFTGLTLLDTIQGTVGAIS 87

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +                +F E+VH+ ++  I  +L       E F    E  ++  KA  
Sbjct: 88  LVPDAETMHEEAVYTNISFMESVHAKSYSNIFMTLATTPQINEAFRWSEENENLQRKAKI 147

Query: 162 ALQYTQ 167
            + Y +
Sbjct: 148 IMSYYR 153


>gi|227502986|ref|ZP_03933035.1| ribonucleoside-diphosphate reductase [Corynebacterium accolens ATCC
           49725]
 gi|306836783|ref|ZP_07469743.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           accolens ATCC 49726]
 gi|227076047|gb|EEI14010.1| ribonucleoside-diphosphate reductase [Corynebacterium accolens ATCC
           49725]
 gi|304567329|gb|EFM42934.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           accolens ATCC 49726]
          Length = 329

 Score = 70.3 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 50/137 (36%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +     N W+P +VP+ +DL  WK+   LT+ E+    R        
Sbjct: 20  NWNNIPDDKDLEVWERLTGNFWLPEKVPVSNDLPSWKT---LTEKEKETTMRVFTGLTLL 76

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYR 150
           +++      +++                AF E+VH+ ++  I  +L       + F    
Sbjct: 77  DTIQGTVGAISLLPDSQTLHEEAVYTNIAFMESVHAKSYSNIFMTLASTPMINDAFRWSE 136

Query: 151 EVPSITAKANWALQYTQ 167
           E  ++  KA   L Y  
Sbjct: 137 ENENLQKKAKIILSYYN 153


>gi|57790965|ref|YP_182369.1| ribonucleotide reductase subunit 2 [Gallid herpesvirus 1]
 gi|5918981|gb|AAD56212.1|AF168792_13 ribonucleotide reductase small subunit [Gallid herpesvirus 1]
          Length = 310

 Score = 70.3 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 47/129 (36%), Gaps = 8/129 (6%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
               E    +  N+W   E+    D       + LT +E    K    F A+++ L+  +
Sbjct: 16  DDIRELRDLSIANNWNEFELCYSRDEKD---VDLLTPEELDFYKLVFAFLAAADDLINLD 72

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYRE----VPSI 155
           I   +     + + + Y   Q   E VHS T+  +   L   +    + Y       P+I
Sbjct: 73  IG-NLMTLFLHKDIQHYYAEQIRIETVHSRTYSLVQMILFKGDLHARDRYVTEAIKDPAI 131

Query: 156 TAKANWALQ 164
             K +W  +
Sbjct: 132 KKKIDWLNR 140


>gi|323145837|gb|ADX32078.1| hypothetical protein [Pseudomonas phage P3_CHA]
 gi|323146023|gb|ADX32263.1| hypothetical protein [Pseudomonas phage PAK_P3]
          Length = 344

 Score = 70.3 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 52/127 (40%), Gaps = 10/127 (7%)

Query: 35  LPLKYGWAWEK-YLSACNNHWMPTEVPMQDDLALWKSKNGL------TDDERLMIKRNLG 87
            P  Y WA E   + A + HW   +  + DD   + S +GL       ++ + ++ + L 
Sbjct: 16  RPFVYPWAVEAARVHAIDMHWDVHQADLTDDKQQYFSTSGLGTNQVPHENHKWLLDKTLS 75

Query: 88  FFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG--EL 145
            F   +  V       +  ++ N E R +L+  A  E VH   +       G  +G  + 
Sbjct: 76  MFTEMDRTVGEGY-TKLLPYIKNNEIRNWLITAASREVVHQRAYALAAEEFGFTDGDWKA 134

Query: 146 FNMYREV 152
           F  Y+E+
Sbjct: 135 FASYKEM 141


>gi|237729635|ref|ZP_04560116.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter sp.
           30_2]
 gi|226908241|gb|EEH94159.1| ribonucleotide-diphosphate reductase subunit beta [Citrobacter sp.
           30_2]
          Length = 319

 Score = 70.3 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 56/149 (37%), Gaps = 5/149 (3%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           M  +R        ++     E +    +N W+P +VP+ +D+  W++   L   E+ +  
Sbjct: 1   MTLSRVSAINWNKIEDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LNAAEQQLTI 57

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLD 141
           R        +++       A+      P     L   +F EAVH+ ++  I ++L    D
Sbjct: 58  RVFTGLTLLDTIQNVAGAPALMADSLTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKD 117

Query: 142 EGELFNMYREVPSITAKANWALQYTQTLS 170
               +    E   +  KA   L +  +  
Sbjct: 118 VDAAYAWSEENTPLQRKAQIVLTHYASDE 146


>gi|325977861|ref|YP_004287577.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
 gi|325177789|emb|CBZ47833.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 320

 Score = 69.9 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 56/133 (42%), Gaps = 8/133 (6%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           + N++  +     WEK        W+ T +P+ +DL  W+    L+ +E+ ++ +  G  
Sbjct: 10  NWNEIEDIIDKSTWEKLTEQ---FWLDTRIPLSNDLDDWRK---LSAEEKDLVGKVFGGL 63

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFN 147
              +++ + + V AI   +  P     L    F E+VH+ ++  I ++L        +F 
Sbjct: 64  TLLDTMQSESGVEAIRADVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKSEIEAIFE 123

Query: 148 MYREVPSITAKAN 160
                  +  KA 
Sbjct: 124 WTNSNDCLQKKAK 136


>gi|216905873|ref|YP_002333501.1| ribonucleotide reductase subunit 2 [Equid herpesvirus 9]
 gi|216410027|dbj|BAH02445.1| small subunit of ribonucleotide reductase [Equid herpesvirus 9]
          Length = 321

 Score = 69.9 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 44/126 (34%), Gaps = 8/126 (6%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                    +  N W+ T++P+ DDL        LT  ER   +    F ++++ LV  N
Sbjct: 28  PDIEHLRSLSVANRWLDTDLPISDDLKD---VAKLTPAEREFYRFLFAFLSAADDLVNLN 84

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI-ITSLGLD---EGELFNMYREVPSI 155
           +   +    +  +   Y + Q   E  HS  +  I +   G D               +I
Sbjct: 85  LGD-LSALFTQKDILHYYIEQESIEVTHSRVYSAIQLMLFGNDAAARARYVASIIGDAAI 143

Query: 156 TAKANW 161
             K  W
Sbjct: 144 KRKVAW 149


>gi|209877300|ref|XP_002140092.1| ribonucleoside-diphosphate reductase beta subunit family protein
           [Cryptosporidium muris RN66]
 gi|209555698|gb|EEA05743.1| ribonucleoside-diphosphate reductase beta subunit family protein
           [Cryptosporidium muris RN66]
          Length = 357

 Score = 69.9 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 58/176 (32%), Gaps = 14/176 (7%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           + +L        L P+KY   W  Y       W    +    DL        +++ +R  
Sbjct: 15  ETILLDNPFRWVLFPIKYNRLWNFYKKYEVVFWTAEVISYIKDL------GIISEVDRRF 68

Query: 82  IKRN-LGF----FASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
           +    L F    F S+  L +  +       +  PE R Y       E ++   F   I 
Sbjct: 69  VDSIELLFSSRVFISNTGLDSVLVACEFLSQIQVPEARGYFSFTICMENIYKEVFMNYID 128

Query: 137 SLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
            +   + E     +E     AK  + L+    ++    +       +++L  S+ F
Sbjct: 129 VIRKYKSE---NIKEYDHKEAKMRYHLKLKDIITDNQHYQRKIEFANQLLDSSVPF 181


>gi|261494146|ref|ZP_05990649.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia
           haemolytica serotype A2 str. BOVINE]
 gi|261310312|gb|EEY11512.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia
           haemolytica serotype A2 str. BOVINE]
          Length = 325

 Score = 69.9 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 58/142 (40%), Gaps = 7/142 (4%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
              + P +Y    E   +  +++W+ TE     D+  +++   + D ER ++ R +   A
Sbjct: 9   RLNIKPYEYPELLEFKDAIRHSYWLHTEFNFTGDIQDYRT--TINDHERHVLTRAM--LA 64

Query: 91  SSESLVA-NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY 149
            S+  V        +YR+   PE        A  E  H   + +++  LGL   E+F+  
Sbjct: 65  ISQVEVNVKRFWGELYRYFPKPEMDDVGGTFAESEVRHKDAYSFLLEKLGL--NEMFSQI 122

Query: 150 REVPSITAKANWALQYTQTLSS 171
            E+  +  +  +   + +   +
Sbjct: 123 HEIEPLMNRIRYMESFMKDKDA 144


>gi|261753311|ref|ZP_05997020.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis
           bv. 3 str. 686]
 gi|261743064|gb|EEY30990.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis
           bv. 3 str. 686]
          Length = 327

 Score = 69.9 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 49/128 (38%), Gaps = 5/128 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +     N W+P +VP+ +D+  W++   L   E+ +  R        
Sbjct: 18  NWNRIEDDKDLEVWNRLTGNFWLPEKVPLSNDIQSWET---LKPQEKQLTIRVFTGLTLL 74

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS--LGLDEGELFNMYR 150
           +++      + +      P     L   +F EAVH+ ++  I ++  L  D  + +    
Sbjct: 75  DTIQNAVGAVKLMDDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCLTPDVDDAYRWSE 134

Query: 151 EVPSITAK 158
           E   +  K
Sbjct: 135 ENEFLQRK 142


>gi|163844498|ref|YP_001622153.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis
           ATCC 23445]
 gi|163675221|gb|ABY39331.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
          Length = 329

 Score = 69.9 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 49/128 (38%), Gaps = 5/128 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +     N W+P +VP+ +D+  W++   L   E+ +  R        
Sbjct: 20  NWNRIEDDKDLEVWNRLTGNFWLPEKVPLSNDIQSWET---LKPQEKQLTIRVFTGLTLL 76

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS--LGLDEGELFNMYR 150
           +++      + +      P     L   +F EAVH+ ++  I ++  L  D  + +    
Sbjct: 77  DTIQNAVGAVKLMDDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCLTPDVDDAYRWSE 136

Query: 151 EVPSITAK 158
           E   +  K
Sbjct: 137 ENEFLQRK 144


>gi|261496013|ref|ZP_05992423.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia
           haemolytica serotype A2 str. OVINE]
 gi|261308263|gb|EEY09556.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia
           haemolytica serotype A2 str. OVINE]
          Length = 325

 Score = 69.9 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 58/142 (40%), Gaps = 7/142 (4%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
              + P +Y    E   +  +++W+ TE     D+  +++   + D ER ++ R +   A
Sbjct: 9   RLNIKPYEYPELLEFKDAIRHSYWLHTEFNFTGDIQDYRT--TINDHERHVLTRAM--LA 64

Query: 91  SSESLVA-NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY 149
            S+  V        +YR+   PE        A  E  H   + +++  LGL   E+F+  
Sbjct: 65  ISQVEVNVKRFWGELYRYFPKPEMDDVGGTFAESEVRHKDAYSFLLEKLGL--NEMFSQI 122

Query: 150 REVPSITAKANWALQYTQTLSS 171
            E+  +  +  +   + +   +
Sbjct: 123 HEIEPLMNRIRYMESFMKDKDA 144


>gi|83642896|ref|YP_438184.1| ORF60 [Ovine herpesvirus 2]
 gi|61971010|gb|AAX58095.1| ORF60 [Ovine herpesvirus 2]
 gi|78127895|gb|ABB22279.1| ribonucleotide-reductase small subunit-like protein [Ovine
           herpesvirus 2]
          Length = 305

 Score = 69.9 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 51/156 (32%), Gaps = 13/156 (8%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            ++       N W P ++ +  D+   K    L++ E    K    F   +E+LV  NI 
Sbjct: 16  FFDLTQETFQNRWFPAQINLTADV---KCLGSLSEKEVAFYKYLFTFLGMAETLVNFNID 72

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD---EGELF-NMYREVPSITA 157
             +       + + Y   Q   E VH   +  I+  L  +   E   F     E   +  
Sbjct: 73  ELVAG-FEIHDVKHYYCEQMAMECVHGKVYFNILNMLFKNNIAETRAFAESVLEDEPLRK 131

Query: 158 KANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           K  W     +T  S +            L   + F+
Sbjct: 132 KLQWLEGKIKTAESAAEKVLI-----FYLIEGIFFI 162


>gi|306840845|ref|ZP_07473592.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp.
           BO2]
 gi|306289240|gb|EFM60489.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp.
           BO2]
          Length = 327

 Score = 69.9 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 49/128 (38%), Gaps = 5/128 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +     N W+P +VP+ +D+  W++   L   E+ +  R        
Sbjct: 18  NWNRIEDDKDLEVWNRLTGNFWLPEKVPLSNDIQSWET---LKPQEKQLTIRVFTGLTLL 74

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS--LGLDEGELFNMYR 150
           +++      + +      P     L   +F EAVH+ ++  I ++  L  D  + +    
Sbjct: 75  DTIQNAVGAVKLMDDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCLTPDVDDAYRWSE 134

Query: 151 EVPSITAK 158
           E   +  K
Sbjct: 135 ENEFLQRK 142


>gi|270265355|ref|ZP_06193616.1| ribonucleoside-diphosphate reductase 2 subunit beta [Serratia
           odorifera 4Rx13]
 gi|270040759|gb|EFA13862.1| ribonucleoside-diphosphate reductase 2 subunit beta [Serratia
           odorifera 4Rx13]
          Length = 323

 Score = 69.9 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 53/127 (41%), Gaps = 5/127 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +    +N W+P +VP+ +D+  W +   LT  E+ +  R        +++       A
Sbjct: 25  EVWNRLTSNFWLPEKVPLSNDIPSWAT---LTPKEQQLTIRVFTGLTLLDTIQNTVGAPA 81

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANW 161
           +      P          F EAVH+ ++  I ++L    D  + +    E  ++  KA+ 
Sbjct: 82  LIADALTPHEEAVYSNIGFMEAVHARSYSSIFSTLCQTPDVDDAYRWSEENHALQKKAHI 141

Query: 162 ALQYTQT 168
            L + ++
Sbjct: 142 ILAHYRS 148


>gi|99080359|ref|YP_612513.1| ribonucleotide-diphosphate reductase subunit beta [Ruegeria sp.
           TM1040]
 gi|99036639|gb|ABF63251.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Ruegeria sp. TM1040]
          Length = 338

 Score = 69.9 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 53/131 (40%), Gaps = 5/131 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W     LT DE+ +  R        +++        
Sbjct: 39  EIWNRLTVNFWLPEKVPLSNDIQSWSQ---LTPDEQTLTIRVFTGLTLLDTIQNAVGAPT 95

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANW 161
           + +    P     L   +F EAVH+ ++  + ++L    +  E F    E   + AK+  
Sbjct: 96  LMQDAITPHEEAVLSNISFMEAVHARSYSSVFSTLCQTTEVDEAFRWSAENEHLQAKSRL 155

Query: 162 ALQYTQTLSSP 172
            L      +SP
Sbjct: 156 ILGEYDATASP 166


>gi|325496274|gb|EGC94133.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia
           fergusonii ECD227]
          Length = 319

 Score = 69.9 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSAAEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|256015100|ref|YP_003105109.1| ribonucleotide-diphosphate reductase beta subunit [Brucella microti
           CCM 4915]
 gi|255997760|gb|ACU49447.1| ribonucleotide-diphosphate reductase beta subunit [Brucella microti
           CCM 4915]
          Length = 329

 Score = 69.9 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 49/128 (38%), Gaps = 5/128 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +     N W+P +VP+ +D+  W++   L   E+ +  R        
Sbjct: 20  NWNRIEDDKDLEVWNRLTGNFWLPEKVPLSNDIQSWET---LKPQEKQLTIRVFTGLTLL 76

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS--LGLDEGELFNMYR 150
           +++      + +      P     L   +F EAVH+ ++  I ++  L  D  + +    
Sbjct: 77  DTIQNAVGAVKLMDDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCLTPDVDDAYRWSE 136

Query: 151 EVPSITAK 158
           E   +  K
Sbjct: 137 ENEFLQRK 144


>gi|225628773|ref|ZP_03786807.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           str. Cudo]
 gi|237817303|ref|ZP_04596295.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           str. 2308 A]
 gi|225616619|gb|EEH13667.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           str. Cudo]
 gi|237788116|gb|EEP62332.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           str. 2308 A]
          Length = 335

 Score = 69.9 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 55/152 (36%), Gaps = 8/152 (5%)

Query: 12  AGEKRVNVDDKRMLNARS---DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALW 68
             E  +N+  K     R           ++     E +     N W+P +VP+ +D+  W
Sbjct: 2   TEESFMNMQYKTATKGRPASVRAINWNRIEDDKDLEVWNRLTGNFWLPEKVPLSNDIQSW 61

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
           ++   L   E+ +  R        +++      + +      P     L   +F EAVH+
Sbjct: 62  ET---LKPQEKQLTIRVFTGLTLLDTIQNAVGAVKLMDDALTPHEEAVLSNISFMEAVHA 118

Query: 129 HTFQYIITS--LGLDEGELFNMYREVPSITAK 158
            ++  I ++  L  D  + +    E   +  K
Sbjct: 119 RSYSSIFSTLCLTPDVDDAYRWSEENEFLQRK 150


>gi|322385107|ref|ZP_08058754.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           cristatus ATCC 51100]
 gi|321270731|gb|EFX53644.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           cristatus ATCC 51100]
          Length = 321

 Score = 69.9 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 56/121 (46%), Gaps = 10/121 (8%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     ++L + + V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTLQSESGVD 75

Query: 103 AIYRHL-SNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKA 159
           A+ + + +  E   +   Q F E+VH+ ++  I ++L       E+F      P +  KA
Sbjct: 76  ALRKDVRTAHEEAVFNNIQ-FMESVHAKSYSSIFSTLNTKAEIEEIFEWTNTNPYLQRKA 134

Query: 160 N 160
            
Sbjct: 135 E 135


>gi|315641368|ref|ZP_07896443.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           italicus DSM 15952]
 gi|315482861|gb|EFU73382.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           italicus DSM 15952]
          Length = 321

 Score = 69.9 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 58/133 (43%), Gaps = 8/133 (6%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           + N++  +     WEK        W+ T +P+ +DL  W+    L++ E+ ++    G  
Sbjct: 10  NWNEIEDVIDKSTWEKLTEQ---FWLDTRIPLSNDLDDWRK---LSEPEKQLVGHVFGGL 63

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFN 147
              ++L + + +  + +    P     L    F E+VH+ ++  I ++L   +   E+F 
Sbjct: 64  TLLDTLQSESGIDQLRKDARTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKKEIEEIFE 123

Query: 148 MYREVPSITAKAN 160
                P + AKA 
Sbjct: 124 WTNTNPYLQAKAE 136


>gi|325955614|ref|YP_004239274.1| ribonucleotide reductase [Weeksella virosa DSM 16922]
 gi|323438232|gb|ADX68696.1| ribonucleotide reductase [Weeksella virosa DSM 16922]
          Length = 324

 Score = 69.9 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 49/147 (33%), Gaps = 5/147 (3%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
                P +Y        +     W+ +EV    D   + S   L   ER  IK +L   A
Sbjct: 7   RINYKPFEYPEILTFTEAINKAFWVHSEVDFTADTQDFHSHLNL--AERTAIKHSLLAIA 64

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
             E  V       IY H   PE        A  E  HS  +  ++  LG ++   F    
Sbjct: 65  QIEVAVKTFWGD-IYDHFPKPEFNGLGATFAECEFRHSEAYSRLLEVLGYNDD--FQTLL 121

Query: 151 EVPSITAKANWALQYTQTLSSPSFHYW 177
           ++P I  + ++     +   S     +
Sbjct: 122 DIPVIKGRVDYLSNALKDAKSSDRKSY 148


>gi|262043918|ref|ZP_06017006.1| ribonucleoside-diphosphate reductase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259038772|gb|EEW39955.1| ribonucleoside-diphosphate reductase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 320

 Score = 69.9 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 51/129 (39%), Gaps = 5/129 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        +++       A
Sbjct: 22  EVWNRLTSNFWLPEKVPLSNDIPAWQT---LSAAEQQLTIRVFTELTLLDTIQNTVGAPA 78

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANW 161
           +      P     L   +F EAVH+ ++  I ++L    +    F        +  KA  
Sbjct: 79  LMADALTPHEEAVLSNISFMEAVHARSYSSIFSTLCHSKEVDAAFAWSESCDPLQRKAQL 138

Query: 162 ALQYTQTLS 170
            L Y Q   
Sbjct: 139 MLGYYQADE 147


>gi|170765644|ref|ZP_02900455.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           albertii TW07627]
 gi|170124790|gb|EDS93721.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           albertii TW07627]
          Length = 319

 Score = 69.9 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSAAEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|23500072|ref|NP_699512.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis
           1330]
 gi|62317763|ref|YP_223616.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 1 str. 9-941]
 gi|83269749|ref|YP_419040.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           melitensis biovar Abortus 2308]
 gi|148558197|ref|YP_001257348.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ovis
           ATCC 25840]
 gi|161620390|ref|YP_001594276.1| ribonucleotide-diphosphate reductase subunit beta [Brucella canis
           ATCC 23365]
 gi|189023015|ref|YP_001932756.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           S19]
 gi|254691263|ref|ZP_05154517.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 6 str. 870]
 gi|254695435|ref|ZP_05157263.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 3 str. Tulya]
 gi|254699051|ref|ZP_05160879.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|254699599|ref|ZP_05161427.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis
           bv. 5 str. 513]
 gi|254706144|ref|ZP_05167972.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           pinnipedialis M163/99/10]
 gi|254711557|ref|ZP_05173368.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           pinnipedialis B2/94]
 gi|254712154|ref|ZP_05173965.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           M644/93/1]
 gi|254715225|ref|ZP_05177036.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           M13/05/1]
 gi|254720036|ref|ZP_05181847.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp.
           83/13]
 gi|254732497|ref|ZP_05191075.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 4 str. 292]
 gi|256029807|ref|ZP_05443421.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           pinnipedialis M292/94/1]
 gi|256059454|ref|ZP_05449656.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           neotomae 5K33]
 gi|256157977|ref|ZP_05455895.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           M490/95/1]
 gi|256253064|ref|ZP_05458600.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           B1/94]
 gi|256256449|ref|ZP_05461985.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 9 str. C68]
 gi|260167086|ref|ZP_05753897.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp.
           F5/99]
 gi|260544998|ref|ZP_05820819.1| ribonucleotide reductase [Brucella abortus NCTC 8038]
 gi|260568371|ref|ZP_05838840.1| ribonucleotide reductase [Brucella suis bv. 4 str. 40]
 gi|260756870|ref|ZP_05869218.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 6 str. 870]
 gi|260760301|ref|ZP_05872649.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 4 str. 292]
 gi|260763541|ref|ZP_05875873.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260882684|ref|ZP_05894298.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 9 str. C68]
 gi|261215815|ref|ZP_05930096.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 3 str. Tulya]
 gi|261216944|ref|ZP_05931225.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           M13/05/1]
 gi|261220160|ref|ZP_05934441.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           B1/94]
 gi|261313587|ref|ZP_05952784.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           pinnipedialis M163/99/10]
 gi|261319174|ref|ZP_05958371.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           pinnipedialis B2/94]
 gi|261319814|ref|ZP_05959011.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           M644/93/1]
 gi|261323425|ref|ZP_05962622.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           neotomae 5K33]
 gi|261750056|ref|ZP_05993765.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis
           bv. 5 str. 513]
 gi|261756480|ref|ZP_06000189.1| ribonucleotide reductase [Brucella sp. F5/99]
 gi|265985045|ref|ZP_06097780.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp.
           83/13]
 gi|265986823|ref|ZP_06099380.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           pinnipedialis M292/94/1]
 gi|265996493|ref|ZP_06109050.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           M490/95/1]
 gi|297249809|ref|ZP_06933510.1| ribonucleoside-diphosphate reductase, beta subunit [Brucella
           abortus bv. 5 str. B3196]
 gi|306839412|ref|ZP_07472226.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp. NF
           2653]
 gi|306845616|ref|ZP_07478185.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp.
           BO1]
 gi|23463663|gb|AAN33517.1| ribonucleoside-diphosphate reductase, beta subunit [Brucella suis
           1330]
 gi|62197956|gb|AAX76255.1| NrdF, ribonucleoside-diphosphate reductase, beta subunit [Brucella
           abortus bv. 1 str. 9-941]
 gi|82940023|emb|CAJ13054.1| Ribonucleotide reductase [Brucella melitensis biovar Abortus 2308]
 gi|148369482|gb|ABQ62354.1| ribonucleoside-diphosphate reductase, beta subunit [Brucella ovis
           ATCC 25840]
 gi|161337201|gb|ABX63505.1| Ribonucleoside-diphosphate reductase [Brucella canis ATCC 23365]
 gi|189021589|gb|ACD74310.1| Ribonucleotide reductase [Brucella abortus S19]
 gi|260098269|gb|EEW82143.1| ribonucleotide reductase [Brucella abortus NCTC 8038]
 gi|260155036|gb|EEW90117.1| ribonucleotide reductase [Brucella suis bv. 4 str. 40]
 gi|260670619|gb|EEX57559.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 4 str. 292]
 gi|260673962|gb|EEX60783.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|260676978|gb|EEX63799.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 6 str. 870]
 gi|260872212|gb|EEX79281.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 9 str. C68]
 gi|260917422|gb|EEX84283.1| ribonucleotide-diphosphate reductase subunit beta [Brucella abortus
           bv. 3 str. Tulya]
 gi|260918744|gb|EEX85397.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           B1/94]
 gi|260922033|gb|EEX88601.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           M13/05/1]
 gi|261292504|gb|EEX96000.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           M644/93/1]
 gi|261298397|gb|EEY01894.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           pinnipedialis B2/94]
 gi|261299405|gb|EEY02902.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           neotomae 5K33]
 gi|261302613|gb|EEY06110.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           pinnipedialis M163/99/10]
 gi|261736464|gb|EEY24460.1| ribonucleotide reductase [Brucella sp. F5/99]
 gi|261739809|gb|EEY27735.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis
           bv. 5 str. 513]
 gi|262550790|gb|EEZ06951.1| ribonucleotide-diphosphate reductase subunit beta [Brucella ceti
           M490/95/1]
 gi|264659020|gb|EEZ29281.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           pinnipedialis M292/94/1]
 gi|264663637|gb|EEZ33898.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp.
           83/13]
 gi|297173678|gb|EFH33042.1| ribonucleoside-diphosphate reductase, beta subunit [Brucella
           abortus bv. 5 str. B3196]
 gi|306273937|gb|EFM55764.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp.
           BO1]
 gi|306405535|gb|EFM61800.1| ribonucleotide-diphosphate reductase subunit beta [Brucella sp. NF
           2653]
          Length = 329

 Score = 69.9 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 49/128 (38%), Gaps = 5/128 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +     N W+P +VP+ +D+  W++   L   E+ +  R        
Sbjct: 20  NWNRIEDDKDLEVWNRLTGNFWLPEKVPLSNDIQSWET---LKPQEKQLTIRVFTGLTLL 76

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS--LGLDEGELFNMYR 150
           +++      + +      P     L   +F EAVH+ ++  I ++  L  D  + +    
Sbjct: 77  DTIQNAVGAVKLMDDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCLTPDVDDAYRWSE 136

Query: 151 EVPSITAK 158
           E   +  K
Sbjct: 137 ENEFLQRK 144


>gi|25028975|ref|NP_739029.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           efficiens YS-314]
 gi|259508040|ref|ZP_05750940.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
           [Corynebacterium efficiens YS-314]
 gi|23494262|dbj|BAC19229.1| ribonucleotide reductase beta chain [Corynebacterium efficiens
           YS-314]
 gi|259164381|gb|EEW48935.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
           [Corynebacterium efficiens YS-314]
          Length = 334

 Score = 69.9 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 50/126 (39%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P ++P+ +D+  W     LTD E+    R        +++      ++
Sbjct: 36  EVWDRLTGNFWLPEKIPVSNDIKSW---GTLTDKEKQATMRVFTGLTLLDTIQGTVGAVS 92

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +     +      L   AF E+VH+ ++  I  +L       + F    E  ++  KA  
Sbjct: 93  LLPDAESLHEEAVLTNIAFMESVHAKSYSNIFMTLASTPQINDAFRWSEENEALQRKAKI 152

Query: 162 ALQYTQ 167
            L Y +
Sbjct: 153 ILAYYE 158


>gi|327198239|ref|YP_004306815.1| putative ribonucleotide reductase B subunit [Pseudomonas phage
           KPP10]
 gi|297591765|dbj|BAJ09185.1| putative ribonucleotide reductase B subunit [Pseudomonas phage
           KPP10]
          Length = 339

 Score = 69.9 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 52/127 (40%), Gaps = 10/127 (7%)

Query: 35  LPLKYGWAWEK-YLSACNNHWMPTEVPMQDDLALWKSKNGL------TDDERLMIKRNLG 87
            P  Y WA E   + A + HW   +  + DD   + S +GL       ++ + ++ + L 
Sbjct: 11  RPFVYPWAVEAARVHAIDMHWDVHQADLTDDKQQYFSTSGLGTNQVPHENHKWLLDKTLS 70

Query: 88  FFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG--EL 145
            F   +  V       +  ++ N E R +L+  A  E VH   +       G  +G  + 
Sbjct: 71  MFTEMDRTVGEGY-TKLLPYIKNNEIRNWLITAASREVVHQRAYALAAEEFGFTDGDWKA 129

Query: 146 FNMYREV 152
           F  Y+E+
Sbjct: 130 FASYKEM 136


>gi|289167885|ref|YP_003446154.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           mitis B6]
 gi|288907452|emb|CBJ22289.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           mitis B6]
          Length = 321

 Score = 69.9 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V 
Sbjct: 23  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGVQ 76

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           A+   +  P          F E+VH+ ++  I ++L       E+F      P +  KA 
Sbjct: 77  ALRSDIRTPHEEAVFNNIQFMESVHAKSYSSIFSTLNTKAEIEEIFEWTNTNPYLQKKAE 136


>gi|294853320|ref|ZP_06793992.1| ribonucleoside-diphosphate reductase [Brucella sp. NVSL 07-0026]
 gi|294818975|gb|EFG35975.1| ribonucleoside-diphosphate reductase [Brucella sp. NVSL 07-0026]
          Length = 329

 Score = 69.9 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 49/128 (38%), Gaps = 5/128 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +     N W+P +VP+ +D+  W++   L   E+ +  R        
Sbjct: 20  NWNRIEDDKDLEVWNRLTGNFWLPEKVPLSNDIQSWET---LKPQEKQLTIRVFTGLTLL 76

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS--LGLDEGELFNMYR 150
           +++      + +      P     L   +F EAVH+ ++  I ++  L  D  + +    
Sbjct: 77  DTIQNAVGAVKLMDDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCLTPDVDDAYRWSE 136

Query: 151 EVPSITAK 158
           E   +  K
Sbjct: 137 ENEFLQRK 144


>gi|17567153|ref|NP_508269.1| hypothetical protein F19G12.2 [Caenorhabditis elegans]
 gi|10864352|gb|AAG24065.1| Hypothetical protein F19G12.2 [Caenorhabditis elegans]
          Length = 668

 Score = 69.9 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 7/75 (9%)

Query: 121 AFEEAVHSHTFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYW 177
              E +HS  +  ++ +   D+ E   LFN       I AKA+W L++    ++P    +
Sbjct: 445 IAVENIHSEMYAKLLEAYIRDDAERNILFNAITTFKFIKAKADWCLRWISDHNAP----F 500

Query: 178 NKRRRSRILTRSLRF 192
           ++R  +      + F
Sbjct: 501 SERLAAFAAVEGIFF 515


>gi|257870055|ref|ZP_05649708.1| ribonucleoside-diphosphate reductase [Enterococcus gallinarum EG2]
 gi|257804219|gb|EEV33041.1| ribonucleoside-diphosphate reductase [Enterococcus gallinarum EG2]
          Length = 322

 Score = 69.9 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 56/133 (42%), Gaps = 8/133 (6%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           + N +  +     WEK        W+ T +P+ +DL  W++   L+D E+  +    G  
Sbjct: 10  NWNAIEDIIDKSTWEKLTEQ---FWLDTRIPLSNDLDDWRT---LSDLEKTTVGYVFGGL 63

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFN 147
              +++ + + +  + + +  P     L    F E+VH+ ++  I ++L       E+F 
Sbjct: 64  TLLDTVQSESGMDQLRKDVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKAEIDEIFE 123

Query: 148 MYREVPSITAKAN 160
                P +  KA 
Sbjct: 124 WTNTNPYLQKKAE 136


>gi|183981661|ref|YP_001849952.1| ribonucleoside-diphosphate reductase (beta chain) NrdF2
           [Mycobacterium marinum M]
 gi|183174987|gb|ACC40097.1| ribonucleoside-diphosphate reductase (beta chain) NrdF2
           [Mycobacterium marinum M]
          Length = 324

 Score = 69.9 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 54/127 (42%), Gaps = 7/127 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W     LT  E+ +  R        +++      ++
Sbjct: 26  EVWDRLTGNFWLPEKVPVSNDIPSW---GTLTAGEKQLTMRVFTGLTMLDTIQGTVGAVS 82

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY---REVPSITAKAN 160
           +      P     L   AF E+VH+ ++  I ++L     E+ + +    E  ++  KA 
Sbjct: 83  LIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCS-TAEIDDAFRWSEENSNLQRKAE 141

Query: 161 WALQYTQ 167
             L+Y +
Sbjct: 142 IVLEYYR 148


>gi|254702722|ref|ZP_05164550.1| ribonucleotide-diphosphate reductase subunit beta [Brucella suis
           bv. 3 str. 686]
          Length = 335

 Score = 69.9 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 49/128 (38%), Gaps = 5/128 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +     N W+P +VP+ +D+  W++   L   E+ +  R        
Sbjct: 26  NWNRIEDDKDLEVWNRLTGNFWLPEKVPLSNDIQSWET---LKPQEKQLTIRVFTGLTLL 82

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS--LGLDEGELFNMYR 150
           +++      + +      P     L   +F EAVH+ ++  I ++  L  D  + +    
Sbjct: 83  DTIQNAVGAVKLMDDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCLTPDVDDAYRWSE 142

Query: 151 EVPSITAK 158
           E   +  K
Sbjct: 143 ENEFLQRK 150


>gi|121602770|ref|YP_988676.1| ribonucleotide-diphosphate reductase subunit beta [Bartonella
           bacilliformis KC583]
 gi|120614947|gb|ABM45548.1| ribonucleoside-diphosphate reductase, beta subunit [Bartonella
           bacilliformis KC583]
          Length = 324

 Score = 69.9 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 56/127 (44%), Gaps = 5/127 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W+S   LT++E+ +  R        +++      ++
Sbjct: 26  EVWNRLTGNFWLPEKVPLSNDIPSWES---LTEEEKKLTIRVFTGLTLLDTVQNTVGAVS 82

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYREVPSITAKANW 161
           +            L   AF EAVH+ ++  I ++L L  D  + F    E   +  KA  
Sbjct: 83  LMADAVTEHEEAVLTNIAFMEAVHARSYSSIFSTLCLTVDVDDAFRWSEENVYLQKKAKL 142

Query: 162 ALQYTQT 168
            L++ + 
Sbjct: 143 VLEHYEA 149


>gi|118617484|ref|YP_905816.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           ulcerans Agy99]
 gi|118569594|gb|ABL04345.1| ribonucleoside-diphosphate reductase (beta chain) NrdF2
           [Mycobacterium ulcerans Agy99]
          Length = 324

 Score = 69.9 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 54/127 (42%), Gaps = 7/127 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W     LT  E+ +  R        +++      ++
Sbjct: 26  EVWDRLTGNFWLPEKVPVSNDIPSW---GTLTAGEKQLTMRVFTGLTMLDTIQGTVGAVS 82

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY---REVPSITAKAN 160
           +      P     L   AF E+VH+ ++  I ++L     E+ + +    E  ++  KA 
Sbjct: 83  LIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCS-TAEIDDAFRWSEENSNLQRKAE 141

Query: 161 WALQYTQ 167
             L+Y +
Sbjct: 142 IVLEYYR 148


>gi|149013339|ref|ZP_01834070.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae SP19-BS75]
 gi|147762929|gb|EDK69876.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae SP19-BS75]
          Length = 320

 Score = 69.9 bits (170), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGVQ 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           A+   +  P          F E+VH+ ++  I ++L       E+F      P +  KA 
Sbjct: 76  ALRADIRTPHEEAVFNNIQFMESVHAKSYSSIFSTLNTKTEIEEIFEWTNTNPYLQKKAE 135


>gi|312867164|ref|ZP_07727374.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           parasanguinis F0405]
 gi|311097293|gb|EFQ55527.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           parasanguinis F0405]
          Length = 321

 Score = 69.5 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V 
Sbjct: 24  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGVQ 77

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           A+   +  P          F E+VH+ ++  I ++L       E+F      P +  KA 
Sbjct: 78  ALRADIRTPHEEAVFNNIQFMESVHAKSYSSIFSTLNTKSEIEEIFEWTNTNPFLQRKAE 137


>gi|149004132|ref|ZP_01828935.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP14-BS69]
 gi|237649545|ref|ZP_04523797.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae CCRI 1974]
 gi|237822455|ref|ZP_04598300.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae CCRI 1974M2]
 gi|147757865|gb|EDK64875.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP14-BS69]
          Length = 320

 Score = 69.5 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGVQ 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           A+   +  P          F E+VH+ ++  I ++L       E+F      P +  KA 
Sbjct: 76  ALRADIRTPHEEAVFNNIQFMESVHAKSYSSIFSTLNTKTEIEEIFEWTNTNPYLQKKAE 135


>gi|15842613|ref|NP_337650.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis CDC1551]
 gi|31794226|ref|NP_856719.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           bovis AF2122/97]
 gi|57117051|ref|YP_177921.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis H37Rv]
 gi|121638932|ref|YP_979156.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           bovis BCG str. Pasteur 1173P2]
 gi|148662901|ref|YP_001284424.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis H37Ra]
 gi|148824239|ref|YP_001288993.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis F11]
 gi|167969649|ref|ZP_02551926.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis H37Ra]
 gi|215405040|ref|ZP_03417221.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 02_1987]
 gi|215412903|ref|ZP_03421607.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 94_M4241A]
 gi|215428496|ref|ZP_03426415.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T92]
 gi|215432000|ref|ZP_03429919.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis EAS054]
 gi|215447324|ref|ZP_03434076.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T85]
 gi|218754813|ref|ZP_03533609.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis GM 1503]
 gi|219559083|ref|ZP_03538159.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T17]
 gi|224991424|ref|YP_002646113.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium
           bovis BCG str. Tokyo 172]
 gi|253797854|ref|YP_003030855.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis KZN 1435]
 gi|254233678|ref|ZP_04927003.1| ribonucleoside-diphosphate reductase (beta chain) nrdF2
           [Mycobacterium tuberculosis C]
 gi|254365678|ref|ZP_04981723.1| ribonucleoside-diphosphate reductase (beta chain) nrdF2
           [Mycobacterium tuberculosis str. Haarlem]
 gi|254552123|ref|ZP_05142570.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|260188080|ref|ZP_05765554.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis CPHL_A]
 gi|260202186|ref|ZP_05769677.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis T46]
 gi|260206381|ref|ZP_05773872.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis K85]
 gi|289444611|ref|ZP_06434355.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
           tuberculosis T46]
 gi|289448726|ref|ZP_06438470.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis CPHL_A]
 gi|289553161|ref|ZP_06442371.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis KZN 605]
 gi|289571250|ref|ZP_06451477.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis T17]
 gi|289575758|ref|ZP_06455985.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis K85]
 gi|289746856|ref|ZP_06506234.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 02_1987]
 gi|289751720|ref|ZP_06511098.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis T92]
 gi|289755164|ref|ZP_06514542.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis EAS054]
 gi|289759173|ref|ZP_06518551.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T85]
 gi|289763226|ref|ZP_06522604.1| ribonucleoside-diphosphate reductase (beta chain) nrdF2
           [Mycobacterium tuberculosis GM 1503]
 gi|294993448|ref|ZP_06799139.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 210]
 gi|297635679|ref|ZP_06953459.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis KZN 4207]
 gi|297732677|ref|ZP_06961795.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis KZN R506]
 gi|298526518|ref|ZP_07013927.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 94_M4241A]
 gi|306777354|ref|ZP_07415691.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu001]
 gi|306781258|ref|ZP_07419595.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu002]
 gi|306785899|ref|ZP_07424221.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu003]
 gi|306790253|ref|ZP_07428575.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu004]
 gi|306794748|ref|ZP_07433050.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu005]
 gi|306798990|ref|ZP_07437292.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu006]
 gi|306804833|ref|ZP_07441501.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu008]
 gi|306809026|ref|ZP_07445694.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu007]
 gi|306969126|ref|ZP_07481787.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu009]
 gi|306973470|ref|ZP_07486131.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu010]
 gi|307081181|ref|ZP_07490351.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu011]
 gi|307085780|ref|ZP_07494893.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu012]
 gi|313660009|ref|ZP_07816889.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis KZN V2475]
 gi|81671996|sp|Q50549|RIR2B_MYCTU RecName: Full=Ribonucleoside-diphosphate reductase subunit beta
           nrdF2; AltName: Full=Ribonucleoside-diphosphate
           reductase nrdF2; AltName: Full=Ribonucleotide reductase
           R2-2 small subunit
 gi|1395209|gb|AAB81406.1| ribonucleotide reductase R2-2 small subunit [Mycobacterium
           tuberculosis]
 gi|13882928|gb|AAK47464.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
           [Mycobacterium tuberculosis CDC1551]
 gi|31619821|emb|CAD96761.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF2
           (RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT) (R2F PROTEIN)
           [Mycobacterium bovis AF2122/97]
 gi|41352780|emb|CAE55544.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF2
           (RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT) (R2F PROTEIN)
           [Mycobacterium tuberculosis H37Rv]
 gi|121494580|emb|CAL73061.1| Ribonucleoside-diphosphate reductase (beta chain) nrdF2
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|124599207|gb|EAY58311.1| ribonucleoside-diphosphate reductase (beta chain) nrdF2
           [Mycobacterium tuberculosis C]
 gi|134151191|gb|EBA43236.1| ribonucleoside-diphosphate reductase (beta chain) nrdF2
           [Mycobacterium tuberculosis str. Haarlem]
 gi|148507053|gb|ABQ74862.1| ribonucleoside-diphosphate reductase subunit beta NrdF2
           [Mycobacterium tuberculosis H37Ra]
 gi|148722766|gb|ABR07391.1| ribonucleoside-diphosphate reductase beta subunit nrdF2
           [Mycobacterium tuberculosis F11]
 gi|224774539|dbj|BAH27345.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium
           bovis BCG str. Tokyo 172]
 gi|253319357|gb|ACT23960.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis KZN 1435]
 gi|289417530|gb|EFD14770.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
           tuberculosis T46]
 gi|289421684|gb|EFD18885.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis CPHL_A]
 gi|289437793|gb|EFD20286.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis KZN 605]
 gi|289540189|gb|EFD44767.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis K85]
 gi|289545004|gb|EFD48652.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis T17]
 gi|289687384|gb|EFD54872.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 02_1987]
 gi|289692307|gb|EFD59736.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis T92]
 gi|289695751|gb|EFD63180.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis EAS054]
 gi|289710732|gb|EFD74748.1| ribonucleoside-diphosphate reductase (beta chain) nrdF2
           [Mycobacterium tuberculosis GM 1503]
 gi|289714737|gb|EFD78749.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T85]
 gi|298496312|gb|EFI31606.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 94_M4241A]
 gi|308214246|gb|EFO73645.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu001]
 gi|308325901|gb|EFP14752.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu002]
 gi|308329423|gb|EFP18274.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu003]
 gi|308333268|gb|EFP22119.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu004]
 gi|308336923|gb|EFP25774.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu005]
 gi|308340739|gb|EFP29590.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu006]
 gi|308344606|gb|EFP33457.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu007]
 gi|308348554|gb|EFP37405.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu008]
 gi|308353280|gb|EFP42131.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu009]
 gi|308357113|gb|EFP45964.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu010]
 gi|308361065|gb|EFP49916.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu011]
 gi|308364701|gb|EFP53552.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis SUMu012]
 gi|323718280|gb|EGB27458.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis CDC1551A]
 gi|326902729|gb|EGE49662.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis W-148]
 gi|328457631|gb|AEB03054.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Mycobacterium tuberculosis KZN 4207]
          Length = 324

 Score = 69.5 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 54/127 (42%), Gaps = 7/127 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W     LT  E+ +  R        +++      ++
Sbjct: 26  EVWDRLTGNFWLPEKVPVSNDIPSW---GTLTAGEKQLTMRVFTGLTMLDTIQGTVGAVS 82

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY---REVPSITAKAN 160
           +      P     L   AF E+VH+ ++  I ++L     E+ + +    E  ++  KA 
Sbjct: 83  LIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCS-TAEIDDAFRWSEENRNLQRKAE 141

Query: 161 WALQYTQ 167
             LQY +
Sbjct: 142 IVLQYYR 148


>gi|221231890|ref|YP_002511042.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus pneumoniae ATCC 700669]
 gi|220674350|emb|CAR68896.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus pneumoniae ATCC 700669]
          Length = 320

 Score = 69.5 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGVQ 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           A+   +  P          F E+VH+ ++  I ++L       E+F      P +  KA 
Sbjct: 76  ALREDIRTPHEEAVFNNIQFMESVHAKSYSSIFSTLNTKAEIEEIFEWTNTNPYLQKKAE 135


>gi|200386806|ref|ZP_03213418.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|199603904|gb|EDZ02449.1| ribonucleoside-diphosphate reductase, beta subunit [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
          Length = 319

 Score = 69.5 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 53/133 (39%), Gaps = 5/133 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P ++P+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKIQDDKDLEVWNRLTSNFWLPEKMPLSNDIPAWQT---LSAAEQQLTIRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++       ++      P     L   +F EAVH+ ++  I ++L    +    +    
Sbjct: 67  DTIQNIAGAPSLMADAITPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKEVDAAYAWSE 126

Query: 151 EVPSITAKANWAL 163
           E P +  KA   L
Sbjct: 127 ENPPLQRKAQIIL 139


>gi|325291517|ref|YP_004277381.1| ribonucleotide-diphosphate reductase subunit beta [Agrobacterium
           sp. H13-3]
 gi|325059370|gb|ADY63061.1| ribonucleotide-diphosphate reductase subunit beta [Agrobacterium
           sp. H13-3]
          Length = 324

 Score = 69.5 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 54/138 (39%), Gaps = 5/138 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +D+  W     L  +E+ +  R        
Sbjct: 15  NWNRIEDDKDLEVWNRLTSNFWLPEKVPLSNDIPSW---GTLKPEEQTLTIRVFTGLTLL 71

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++      + +    + P     L   +F EAVH+ ++  I ++L    D  + +    
Sbjct: 72  DTIQNGVGSVRLMADSATPHEEAVLSNISFMEAVHARSYSSIFSTLCSTPDVDDAYRWSE 131

Query: 151 EVPSITAKANWALQYTQT 168
           E   +  K+   ++   +
Sbjct: 132 ENEFLQRKSALIMREYDS 149


>gi|300934659|ref|ZP_07149915.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           resistens DSM 45100]
          Length = 332

 Score = 69.5 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 52/136 (38%), Gaps = 14/136 (10%)

Query: 28  RSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLG 87
           R        ++     E +     N W+P +VP+ +DL  W   NGL+D ER +  R   
Sbjct: 19  RIRPINWNKVQDDKDLEVWQRLTANFWLPEKVPLSNDLKDW---NGLSDIERTLTMRVFT 75

Query: 88  FFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFN 147
                +++ A    ++  +              AF ++VH+ ++             +F+
Sbjct: 76  GLTLLDTMQATVGEISQIQDAQTEHEEAVYTNIAFMQSVHARSYS-----------SVFS 124

Query: 148 MYREVPSITAKANWAL 163
                PSI A   WA+
Sbjct: 125 TLANTPSINAAYEWAV 140


>gi|12084869|ref|NP_073334.1| ribonucleotide reductase subunit 2 [Meleagrid herpesvirus 1]
 gi|11095873|gb|AAG30080.1|AF282130_43 UL40 ribonucleotide reductase small subunit [Meleagrid herpesvirus
           1]
 gi|12025152|gb|AAG45778.1|AF291866_45 UL40 ribonucleotide reductase, small subunit [Meleagrid herpesvirus
           1]
          Length = 355

 Score = 69.5 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 52/141 (36%), Gaps = 8/141 (5%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                    +  N W  TE  + DDL        L++DE+   +    F ++++ LV  N
Sbjct: 63  PDIGNLRSLSIMNRWTETEFVIADDLED---VGKLSEDEKNFYRFLFTFLSAADDLVNLN 119

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI-ITSLGLD---EGELFNMYREVPSI 155
           I  ++    +  +   Y   Q   EAVHS  +  I +     D     E        P+I
Sbjct: 120 I-DSLLSLFTQKDIHHYYFEQECIEAVHSRAYSIIQLMLFSNDQAARQEYVTSTLRSPAI 178

Query: 156 TAKANWALQYTQTLSSPSFHY 176
            +K  W  +     +S +  Y
Sbjct: 179 LSKLEWLERRVAECTSIAEKY 199


>gi|218680499|ref|ZP_03528396.1| ribonucleotide-diphosphate reductase subunit beta [Rhizobium etli
           CIAT 894]
          Length = 324

 Score = 69.5 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 54/144 (37%), Gaps = 5/144 (3%)

Query: 27  ARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNL 86
           +R        ++     E +     N W+P +VP+ +D+  W +   LT  E+ +  R  
Sbjct: 9   SRVRAINWNRIEDDKDLEVWNRLTGNFWLPEKVPLSNDIPSWAT---LTAAEQQLTIRVF 65

Query: 87  GFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGE 144
                 +++      + +      P     L   +F EAVH+ ++  I ++L    D   
Sbjct: 66  TGLTLLDTIQNGVGSIRLMEDAITPHEEAVLSNVSFMEAVHARSYSSIFSTLCSTPDVDN 125

Query: 145 LFNMYREVPSITAKANWALQYTQT 168
            +    E   +  K+   ++   +
Sbjct: 126 AYRWSEENEFLQRKSALIMEQYAS 149


>gi|296117839|ref|ZP_06836422.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           ammoniagenes DSM 20306]
 gi|295969070|gb|EFG82312.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           ammoniagenes DSM 20306]
          Length = 328

 Score = 69.5 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 49/118 (41%), Gaps = 5/118 (4%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           + +     N W+P ++P+ +D+  W++   +T  E+    +        ++L      ++
Sbjct: 31  DIWDRLTTNFWLPEKIPVSNDVQSWRN---MTAQEQDATLKVFTGLTVLDTLQGTVGAVS 87

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKA 159
           +  H   P+        AF E+VH+ ++  I  +L       E F   RE   +  KA
Sbjct: 88  LIPHAVTPQEEAVYTNIAFMESVHAKSYSNIFMTLASTPEIDEAFRWARENEHMQYKA 145


>gi|84997706|ref|XP_953574.1| ribonucleoside reductase [Theileria annulata]
 gi|65304571|emb|CAI72896.1| ribonucleoside reductase, putative [Theileria annulata]
          Length = 332

 Score = 69.5 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 49/137 (35%), Gaps = 13/137 (9%)

Query: 20  DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER 79
           +D+ +L    +   + P+++   W  Y    NN W   +    DD+ L            
Sbjct: 16  NDEILLKENHNRWVMFPIEHDTFWILYKEVENNFWAAEDFIFTDDIKLLYQLPKPI---F 72

Query: 80  LMIKRNLGFFASSESLVA---NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI-- 134
             +   L F  + ++ +     +I L +   +   E R +   Q  +E +H+ T   +  
Sbjct: 73  NTLLNLLSFHINLDNKLICRPVDITLDLLSEVQIAEARAFYGFQLTDENIHTETISSMFQ 132

Query: 135 -----ITSLGLDEGELF 146
                + +  +    LF
Sbjct: 133 LFNQQLDTNIVSSNTLF 149


>gi|262285102|gb|ACY41130.1| ribonucleotide reductase subunit 2 [Wood mouse herpesvirus]
          Length = 305

 Score = 69.5 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 52/147 (35%), Gaps = 13/147 (8%)

Query: 51  NNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSN 110
            N W P+++P+  D+A       L   +R   K    F   +E LV  NI   + +  + 
Sbjct: 25  KNRWFPSQIPLSSDVA---GIAQLNATDREFYKFLFVFLGLAEKLVNFNI-EDLVKEFNC 80

Query: 111 PECRQYLLRQAFEEAVHSHTFQYIITSLG----LDEGELFNMYREVPSITAKANWALQYT 166
            +   Y   Q   E +H   +  I+        +   E        P++ AK +W     
Sbjct: 81  HDATHYYAEQMAMENIHGKVYANILQLFFNGDMMKLKEYAVKVVADPTLKAKLDWLHTRV 140

Query: 167 QTLSSPSFHYWNKRRRSRILTRSLRFL 193
           +     +     ++    +L   + F+
Sbjct: 141 K-----NTKTRAEKVLIFLLIEGIFFI 162


>gi|241206478|ref|YP_002977574.1| ribonucleotide-diphosphate reductase subunit beta [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240860368|gb|ACS58035.1| Ribonucleoside-diphosphate reductase [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 324

 Score = 69.5 bits (169), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 54/138 (39%), Gaps = 5/138 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +     N W+P +VP+ +D+  W +   LT  E+ +  R        
Sbjct: 15  NWNRIEDDKDLEVWNRLTGNFWLPEKVPLSNDIPSWAT---LTAAEQQLTIRVFTGLTLL 71

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++      + +    +       L   +F EAVH+ ++  I ++L    D  + +    
Sbjct: 72  DTIQNGVGSIRLMEDAATSHEEAVLSNVSFMEAVHARSYSSIFSTLCSTPDVDDAYRWSE 131

Query: 151 EVPSITAKANWALQYTQT 168
           E   +  K+   ++  ++
Sbjct: 132 ENEFLQRKSALIMEQYRS 149


>gi|330013348|ref|ZP_08307619.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           MS 92-3]
 gi|328533536|gb|EGF60259.1| ribonucleoside-diphosphate reductase, beta subunit [Klebsiella sp.
           MS 92-3]
          Length = 320

 Score = 69.1 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 51/129 (39%), Gaps = 5/129 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        +++       A
Sbjct: 22  EVWNRLTSNFWLPEKVPLSNDIPAWQT---LSAAEQQLTIRVFTGLTLLDTIQNTVGAPA 78

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANW 161
           +      P     L   +F EAVH+ ++  I ++L    +    F        +  KA  
Sbjct: 79  LMADALTPHEEAVLSNISFMEAVHARSYSSIFSTLCHSKEVDAAFAWSESCDPLQCKAQL 138

Query: 162 ALQYTQTLS 170
            L Y Q   
Sbjct: 139 MLGYYQADE 147


>gi|148994532|ref|ZP_01823712.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae SP9-BS68]
 gi|147927202|gb|EDK78238.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae SP9-BS68]
          Length = 319

 Score = 69.1 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGVQ 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           A+   +  P          F E+VH+ ++  I ++L       E+F      P +  KA 
Sbjct: 76  ALRADIRTPHEEAVFNNIQFMESVHAKSYSSIFSTLNTKAEIEEIFEWTNTNPYLQKKAE 135


>gi|290992332|ref|XP_002678788.1| predicted protein [Naegleria gruberi]
 gi|284092402|gb|EFC46044.1| predicted protein [Naegleria gruberi]
          Length = 330

 Score = 69.1 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/175 (13%), Positives = 65/175 (37%), Gaps = 10/175 (5%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACN-NHWMPTEVP--MQDDLALWKSKNGLTDDE 78
           + +L+       L P++Y   WE Y      + W   +    +++D++     + + + +
Sbjct: 15  EEILSENPHRFTLFPIQYPKLWEIYKKRLASSIWSVEQFDQIIRNDIS---KLSEICNSD 71

Query: 79  RLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
              IK  L F  ++      N+  A  + +   E + +   +   + +H   +  +   +
Sbjct: 72  HSFIKIILAFLVANCK-QKTNLWGAF-KDIQILEAKHFHGFRLAMKNIHYEMYCNLFE-I 128

Query: 139 GLDEGELFNMYREV-PSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             +E E   +  ++  S   K+ +  ++  + +  S          +I   +  F
Sbjct: 129 LTEETERSELIEKMINSTMKKSQYTKKWLNSDNLFSERLIGLVCIEQIFLSASFF 183


>gi|168489010|ref|ZP_02713209.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP195]
 gi|183572389|gb|EDT92917.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP195]
 gi|332073523|gb|EGI84002.1| ribonucleotide reductase, small chain family protein [Streptococcus
           pneumoniae GA17570]
          Length = 320

 Score = 69.1 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGVQ 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           A+   +  P          F E+VH+ ++  I ++L       E+F      P +  KA 
Sbjct: 76  ALRADIRTPHEEAVFNNIQFMESVHAKSYSSIFSTLNTKAEIEEIFEWTNTNPYLQKKAE 135


>gi|322376536|ref|ZP_08051029.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           sp. M334]
 gi|321282343|gb|EFX59350.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           sp. M334]
          Length = 320

 Score = 69.1 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGVQ 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           A+   +  P          F E+VH+ ++  I ++L       E+F      P +  KA 
Sbjct: 76  ALRADIRTPHEEAVFNNIQFMESVHAKSYSSIFSTLNTKAEIEEIFEWTNTNPYLQKKAE 135


>gi|307706628|ref|ZP_07643435.1| ribonucleoside-diphosphate reductase 2, subunit beta [Streptococcus
           mitis SK321]
 gi|307618083|gb|EFN97243.1| ribonucleoside-diphosphate reductase 2, subunit beta [Streptococcus
           mitis SK321]
          Length = 320

 Score = 69.1 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGVQ 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           A+   +  P          F E+VH+ ++  I ++L       E+F      P +  KA 
Sbjct: 76  ALRADIRTPHEEAVFNNIQFMESVHAKSYSSIFSTLNTKAEIEEIFEWTNTNPYLQKKAE 135


>gi|300932708|ref|ZP_07147964.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           resistens DSM 45100]
          Length = 331

 Score = 69.1 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 55/152 (36%), Gaps = 11/152 (7%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W     L + ER    R        +++      ++
Sbjct: 33  EVWDRLTANFWLPEKVPLSNDVQSW---GTLNEVERQTTMRVFTGLTMLDTIQGTVGAVS 89

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +                +F E+VH+ ++  I  +L       + F    E   +  KA  
Sbjct: 90  LINDAQTMHEEAVYTNISFMESVHAKSYSSIFMTLASTPEINDAFRWSEENEHLQNKAKI 149

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
            L + +    P      KR+ + +L  S  F 
Sbjct: 150 ILDFYEG-DDPQ-----KRKIASVLLESFLFY 175


>gi|56808544|ref|ZP_00366279.1| COG0208: Ribonucleotide reductase, beta subunit [Streptococcus
           pyogenes M49 591]
 gi|209559615|ref|YP_002286087.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes NZ131]
 gi|209540816|gb|ACI61392.1| Ribonucleotide reductase of class Ib (aerobic), beta subunit
           [Streptococcus pyogenes NZ131]
          Length = 319

 Score = 69.1 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 56/133 (42%), Gaps = 8/133 (6%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           + N++  +     WEK        W+ T +P+ +DL  W+    L+  E+ ++ +  G  
Sbjct: 9   NWNEIEDVIDKSTWEKLTEQ---FWLDTRIPLSNDLDDWRK---LSLQEKDLVGKVFGGL 62

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFN 147
              +++ +   V AI   +  P     L    F E+VH+ ++  I ++L   +   E+F 
Sbjct: 63  TLLDTMQSETGVEAIRADVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKKEIEEIFE 122

Query: 148 MYREVPSITAKAN 160
                  +  KA 
Sbjct: 123 WTNNNEFLQKKAQ 135


>gi|225860977|ref|YP_002742486.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|298229749|ref|ZP_06963430.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae str. Canada MDR_19F]
 gi|298255394|ref|ZP_06978980.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae str. Canada MDR_19A]
 gi|298502819|ref|YP_003724759.1| ribonucleoside-diphosphate reductase [Streptococcus pneumoniae
           TCH8431/19A]
 gi|225727952|gb|ACO23803.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae Taiwan19F-14]
 gi|298238414|gb|ADI69545.1| ribonucleoside-diphosphate reductase [Streptococcus pneumoniae
           TCH8431/19A]
 gi|327389423|gb|EGE87768.1| ribonucleoside-diphosphate reductase subunit beta nrdF2
           [Streptococcus pneumoniae GA04375]
          Length = 320

 Score = 69.1 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGVQ 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           A+   +  P          F E+VH+ ++  I ++L       E+F      P +  KA 
Sbjct: 76  ALRADIRTPHEEAVFNNIQFMESVHAKSYSSIFSTLNTKAEIEEIFEWTNTNPYLQKKAE 135


>gi|222153355|ref|YP_002562532.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           uberis 0140J]
 gi|222114168|emb|CAR42683.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus uberis 0140J]
          Length = 319

 Score = 69.1 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 56/133 (42%), Gaps = 8/133 (6%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           + N++  +     WEK        W+ T +P+ +DL  W+    L+  E+ ++ +  G  
Sbjct: 9   NWNEIEDVIDKSTWEKLTEQ---FWLDTRIPLSNDLDDWRK---LSAQEKDLVGKVFGGL 62

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFN 147
              +++ +   V AI   +  P     L    F E+VH+ ++  I ++L   +   E+F 
Sbjct: 63  TLLDTMQSETGVEAIRADVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKKEIEEIFE 122

Query: 148 MYREVPSITAKAN 160
                  +  KA 
Sbjct: 123 WTNNNEFLQKKAK 135


>gi|332170225|gb|AEE19480.1| ATP-cone domain protein [Krokinobacter diaphorus 4H-3-7-5]
          Length = 425

 Score = 69.1 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 64/177 (36%), Gaps = 13/177 (7%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           R     KR  N       L P +Y   ++   +  +++W+ TE     D+  +K++  +T
Sbjct: 93  RDEQAQKRKTNIFEKRINLKPYEYPQLYDYVPAIRHSYWIHTEYNFTSDIQDFKTR--IT 150

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           D ER  IK  +   +  E  V       IY  +  PE        A  E  H+  + +++
Sbjct: 151 DVERSAIKNTMLAISQIEVAVKGFWGD-IYHKMPKPEVGAVGATFAESEVRHADAYSHLL 209

Query: 136 TSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             LGL++   F + ++ P +  +  +           +                L F
Sbjct: 210 EILGLNKE--FKLLKKKPVMMKRVQYL--------ETALKNAKSEDNKEYSESILLF 256


>gi|15901045|ref|NP_345649.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae TIGR4]
 gi|111657123|ref|ZP_01407908.1| hypothetical protein SpneT_02001649 [Streptococcus pneumoniae
           TIGR4]
 gi|14972661|gb|AAK75289.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           pneumoniae TIGR4]
          Length = 320

 Score = 69.1 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGVQ 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           A+   +  P          F E+VH+ ++  I ++L       E+F      P +  KA 
Sbjct: 76  ALRADIRTPHEEAVFNNIQFMESVHAKSYSSIFSTLNTKAEIEEIFEWTNTNPYLQKKAE 135


>gi|256111772|ref|ZP_05452743.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           melitensis bv. 3 str. Ether]
 gi|265993237|ref|ZP_06105794.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           melitensis bv. 3 str. Ether]
 gi|262764107|gb|EEZ10139.1| ribonucleotide-diphosphate reductase subunit beta [Brucella
           melitensis bv. 3 str. Ether]
          Length = 138

 Score = 69.1 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 7/137 (5%)

Query: 17  VNVDDKRMLNARS---DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNG 73
           +N+  K     R           ++     E +     N W+P +VP+ +D+  W++   
Sbjct: 1   MNMQHKTATKGRPASVRAINWNRIEDDKDLEVWNRLTGNFWLPEKVPLSNDIQSWET--- 57

Query: 74  LTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
           L   E+ +  R        +++      + +      P     L   +F EAVH+ ++  
Sbjct: 58  LKPQEKQLTTRVFTGLTLLDTIQNAVGAVKLMDDALTPHEEAVLSNISFMEAVHARSYSS 117

Query: 134 IITSLGLDEGELFNMYR 150
           I ++L L    + + YR
Sbjct: 118 IFSTLCLTPD-VDDAYR 133


>gi|15903110|ref|NP_358660.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae R6]
 gi|116517162|ref|YP_816517.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae D39]
 gi|148985789|ref|ZP_01818917.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP3-BS71]
 gi|148990437|ref|ZP_01821595.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP6-BS73]
 gi|148999044|ref|ZP_01826476.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP11-BS70]
 gi|149008157|ref|ZP_01831676.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae SP18-BS74]
 gi|149026429|ref|ZP_01836566.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP23-BS72]
 gi|168483243|ref|ZP_02708195.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae CDC1873-00]
 gi|168486506|ref|ZP_02711014.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae CDC1087-00]
 gi|168491101|ref|ZP_02715244.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae CDC0288-04]
 gi|168493105|ref|ZP_02717248.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae CDC3059-06]
 gi|168577270|ref|ZP_02723064.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae MLV-016]
 gi|169833110|ref|YP_001694622.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae Hungary19A-6]
 gi|182684087|ref|YP_001835834.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae CGSP14]
 gi|194397329|ref|YP_002037788.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae G54]
 gi|225854653|ref|YP_002736165.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae JJA]
 gi|225856856|ref|YP_002738367.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae P1031]
 gi|225858968|ref|YP_002740478.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae 70585]
 gi|303255568|ref|ZP_07341620.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae BS455]
 gi|303260588|ref|ZP_07346554.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae SP-BS293]
 gi|303262722|ref|ZP_07348661.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae SP14-BS292]
 gi|303265256|ref|ZP_07351167.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae BS397]
 gi|303267603|ref|ZP_07353445.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae BS457]
 gi|303269940|ref|ZP_07355678.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae BS458]
 gi|307067834|ref|YP_003876800.1| ribonucleotide reductase subunit beta [Streptococcus pneumoniae
           AP200]
 gi|307127225|ref|YP_003879256.1| ribonucleoside-diphosphate reductase subunit beta [Streptococcus
           pneumoniae 670-6B]
 gi|15458689|gb|AAK99870.1| Nonessential ribonucleoside-diP reductase 2, subunit beta, class I,
           function unknown [Streptococcus pneumoniae R6]
 gi|116077738|gb|ABJ55458.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae D39]
 gi|147755114|gb|EDK62169.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP11-BS70]
 gi|147760396|gb|EDK67375.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae SP18-BS74]
 gi|147922093|gb|EDK73216.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP3-BS71]
 gi|147924289|gb|EDK75383.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP6-BS73]
 gi|147929260|gb|EDK80261.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae SP23-BS72]
 gi|168995612|gb|ACA36224.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae Hungary19A-6]
 gi|172043347|gb|EDT51393.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae CDC1873-00]
 gi|182629421|gb|ACB90369.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae CGSP14]
 gi|183570430|gb|EDT90958.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae CDC1087-00]
 gi|183574343|gb|EDT94871.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae CDC0288-04]
 gi|183576617|gb|EDT97145.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae CDC3059-06]
 gi|183577169|gb|EDT97697.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae MLV-016]
 gi|194356996|gb|ACF55444.1| ribonucleoside-diphosphate reductase beta subunit [Streptococcus
           pneumoniae G54]
 gi|225720498|gb|ACO16352.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae 70585]
 gi|225724090|gb|ACO19943.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae JJA]
 gi|225725515|gb|ACO21367.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae P1031]
 gi|301794279|emb|CBW36700.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus pneumoniae INV104]
 gi|301800116|emb|CBW32717.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus pneumoniae OXC141]
 gi|301801954|emb|CBW34682.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus pneumoniae INV200]
 gi|302597474|gb|EFL64568.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pneumoniae BS455]
 gi|302636154|gb|EFL66650.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae SP14-BS292]
 gi|302638301|gb|EFL68770.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae SP-BS293]
 gi|302640522|gb|EFL70931.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae BS458]
 gi|302642869|gb|EFL73174.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae BS457]
 gi|302645227|gb|EFL75463.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           pneumoniae BS397]
 gi|306409371|gb|ADM84798.1| Ribonucleotide reductase, beta subunit [Streptococcus pneumoniae
           AP200]
 gi|306484287|gb|ADM91156.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pneumoniae 670-6B]
 gi|332074795|gb|EGI85267.1| ribonucleotide reductase, small chain family protein [Streptococcus
           pneumoniae GA41301]
 gi|332075112|gb|EGI85583.1| ribonucleotide reductase, small chain family protein [Streptococcus
           pneumoniae GA17545]
          Length = 320

 Score = 69.1 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGVQ 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           A+   +  P          F E+VH+ ++  I ++L       E+F      P +  KA 
Sbjct: 76  ALRADIRTPHEEAVFNNIQFMESVHAKSYSSIFSTLNTKAEIEEIFEWTNTNPYLQKKAE 135


>gi|293365329|ref|ZP_06612046.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           oralis ATCC 35037]
 gi|306825287|ref|ZP_07458629.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sp. oral taxon 071 str. 73H25AP]
 gi|307703869|ref|ZP_07640810.1| ribonucleoside-diphosphate reductase 2, subunit beta [Streptococcus
           oralis ATCC 35037]
 gi|315613100|ref|ZP_07888010.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis ATCC 49296]
 gi|291316779|gb|EFE57215.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           oralis ATCC 35037]
 gi|304432723|gb|EFM35697.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sp. oral taxon 071 str. 73H25AP]
 gi|307622704|gb|EFO01700.1| ribonucleoside-diphosphate reductase 2, subunit beta [Streptococcus
           oralis ATCC 35037]
 gi|315314662|gb|EFU62704.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           sanguinis ATCC 49296]
          Length = 320

 Score = 69.1 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGVQ 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           A+   +  P          F E+VH+ ++  I ++L       E+F      P +  KA 
Sbjct: 76  ALRSDIRTPHEEAVFNNIQFMESVHAKSYSSIFSTLNTKAEIEEIFEWTNTNPYLQRKAE 135


>gi|188533084|ref|YP_001906881.1| Ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia
           tasmaniensis Et1/99]
 gi|188028126|emb|CAO95983.1| Ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia
           tasmaniensis Et1/99]
          Length = 319

 Score = 69.1 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 53/134 (39%), Gaps = 5/134 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +D+  W   N L  +E+ +  R        
Sbjct: 10  NWNKIEDDKDLEVWNRLTSNFWLPEKVPLSNDIPAW---NSLNAEEQQLTIRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++       A+      P     +   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTIQNTLGAPALMADALTPHEEAVMSNISFMEAVHARSYSSIFSTLCHTSDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQ 164
           E   + AKA   LQ
Sbjct: 127 ENAPLQAKAQIILQ 140


>gi|312130784|ref|YP_003998124.1| ribonucleotide reductase [Leadbetterella byssophila DSM 17132]
 gi|311907330|gb|ADQ17771.1| ribonucleotide reductase [Leadbetterella byssophila DSM 17132]
          Length = 324

 Score = 68.7 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 53/162 (32%), Gaps = 13/162 (8%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
                P +Y        +    +W+ +EV    D   + S   L+  ER  +K +L   A
Sbjct: 7   RINYKPFEYPEILTFTSAINKAYWVHSEVDFTADTQDFHS--HLSPAERSAVKNSLLAIA 64

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
             E  V       +Y H   PE        A  E  HS  +  ++  LG +    F    
Sbjct: 65  QIEVAVKTFWG-NLYDHFPKPEFNGLGTTFAECEFRHSEAYSRLLEVLGYNNE--FQKLL 121

Query: 151 EVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           E+P I  +  +     +   S          R + +   + F
Sbjct: 122 EIPVIKQRVEYLGGVLKDTRS--------EDRKKYVISLILF 155


>gi|306829459|ref|ZP_07462649.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           mitis ATCC 6249]
 gi|304428545|gb|EFM31635.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           mitis ATCC 6249]
          Length = 320

 Score = 68.7 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGVQ 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           A+   +  P          F E+VH+ ++  I ++L       E+F      P +  KA 
Sbjct: 76  ALRSDIRTPHEEAVFNNIQFMESVHAKSYSSIFSTLNTKAEIEEIFEWTNTNPYLQRKAE 135


>gi|146301802|ref|YP_001196393.1| ribonucleotide reductase [Flavobacterium johnsoniae UW101]
 gi|146156220|gb|ABQ07074.1| ribonucleotide reductase [Flavobacterium johnsoniae UW101]
          Length = 324

 Score = 68.7 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 55/162 (33%), Gaps = 13/162 (8%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
                P +Y    +   +    +W+ TEV    D   +     L+  E+  +K +L   A
Sbjct: 7   RVNYKPFEYPEVLQFTEAINKAYWVHTEVDFTADTQDFH--AHLSLAEKTAVKNSLLAIA 64

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
             E  V  +    IY H   PE        A  E  HS  +  ++  LG ++   F    
Sbjct: 65  QIEVAV-KSFWGNIYEHFPKPEFNGLGSTFAECEFRHSEAYSRLLEVLGYNDE--FEKLL 121

Query: 151 EVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           +VP I  + ++     +   S            + +   + F
Sbjct: 122 DVPVIRRRVDYLSNVLKDTKSQD--------NRKYMVSLILF 155


>gi|331266449|ref|YP_004326079.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           oralis Uo5]
 gi|326683121|emb|CBZ00739.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           oralis Uo5]
          Length = 320

 Score = 68.7 bits (167), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGVQ 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           A+   +  P          F E+VH+ ++  I ++L       E+F      P +  KA 
Sbjct: 76  ALRSDIRTPHEEAVFNNIQFMESVHAKSYSSIFSTLNTKAEIEEIFEWTNTNPYLQRKAE 135


>gi|297567587|ref|YP_003686558.1| hypothetical protein Mesil_3232 [Meiothermus silvanus DSM 9946]
 gi|297567764|ref|YP_003686735.1| hypothetical protein Mesil_3416 [Meiothermus silvanus DSM 9946]
 gi|296852036|gb|ADH65050.1| hypothetical protein Mesil_3232 [Meiothermus silvanus DSM 9946]
 gi|296852213|gb|ADH65227.1| hypothetical protein Mesil_3416 [Meiothermus silvanus DSM 9946]
          Length = 323

 Score = 68.7 bits (167), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 46/116 (39%), Gaps = 5/116 (4%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W+  E+P+ DD   W     L  +ER   ++ L      ++L     +  +
Sbjct: 17  FWDQNVRQFWVDEEIPLADDKLTW---TTLAPEERETYEKVLVGLTLLDTLQGGVGMPLL 73

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL-GLDEGE-LFNMYREVPSITAK 158
            + + + + +  L      E +H+ ++  I ++L  L   E LF      P + AK
Sbjct: 74  VQTMESAQVKAVLSFMGAMEQMHAKSYSLIFSTLSPLPRIETLFRWAEGHPLLQAK 129


>gi|270292678|ref|ZP_06198889.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           sp. M143]
 gi|270278657|gb|EFA24503.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           sp. M143]
          Length = 322

 Score = 68.7 bits (167), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGVQ 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           A+   +  P          F E+VH+ ++  I ++L       E+F      P +  KA 
Sbjct: 76  ALRSDIRTPHEEAVFNNIQFMESVHAKSYSSIFSTLNTKAEIEEIFEWTNTNPYLQRKAE 135


>gi|239833484|ref|ZP_04681812.1| ribonucleotide-diphosphate reductase subunit beta [Ochrobactrum
           intermedium LMG 3301]
 gi|239821547|gb|EEQ93116.1| ribonucleotide-diphosphate reductase subunit beta [Ochrobactrum
           intermedium LMG 3301]
          Length = 328

 Score = 68.7 bits (167), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 50/128 (39%), Gaps = 5/128 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +     N W+P +VP+ +D+  W++   L  +E+ +  R        
Sbjct: 19  NWNRIEDEKDLEVWNRLTGNFWLPEKVPLSNDIQSWET---LKREEKQLTIRVFTGLTLL 75

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS--LGLDEGELFNMYR 150
           +++      + +      P     L   +F EAVH+ ++  I ++  L  D  + +    
Sbjct: 76  DTIQNAVGAVKLMDDAVTPHEEAVLSNISFMEAVHARSYSSIFSTLCLTPDVDDAYRWSE 135

Query: 151 EVPSITAK 158
           E   +  K
Sbjct: 136 ENEFLQRK 143


>gi|149369595|ref|ZP_01889447.1| ribonucleoside-diphosphate reductase, beta subunit [unidentified
           eubacterium SCB49]
 gi|149357022|gb|EDM45577.1| ribonucleoside-diphosphate reductase, beta subunit [unidentified
           eubacterium SCB49]
          Length = 424

 Score = 68.7 bits (167), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 70/173 (40%), Gaps = 9/173 (5%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQ----LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLA 66
           +  +  +   +KR    ++D+ +    L P +Y   +E   +  +++W+ TE     D+ 
Sbjct: 83  EVAKAYILYRNKRTQERKTDIFERRISLKPYEYPQLYEYVPAIRHSYWIHTEFNFTSDIQ 142

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
            +K++  L + ER  IK  +   +  E  V +       R +  PE        A  E  
Sbjct: 143 DFKTR--LNEVERSAIKNTMLAISQIEVAVKSFWGDLHLR-MPKPEIGAVGSTFAESEVR 199

Query: 127 HSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNK 179
           H+  + +++  LGL++   F   ++ P I  +  +     +   S     + +
Sbjct: 200 HADAYSHLLEILGLNKE--FKALKKKPVIMKRVQYLESALRNSKSDDNEEYAE 250


>gi|307704819|ref|ZP_07641714.1| ribonucleoside-diphosphate reductase 2 subunit beta [Streptococcus
           mitis SK597]
 gi|307708708|ref|ZP_07645171.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           mitis NCTC 12261]
 gi|307709353|ref|ZP_07645811.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           mitis SK564]
 gi|307615282|gb|EFN94492.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           mitis NCTC 12261]
 gi|307619936|gb|EFN99054.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           mitis SK564]
 gi|307621648|gb|EFO00690.1| ribonucleoside-diphosphate reductase 2 subunit beta [Streptococcus
           mitis SK597]
          Length = 320

 Score = 68.7 bits (167), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSNVEKDLVGKVFGGLTLLDTMQSETGVQ 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           A+   +  P          F E+VH+ ++  I ++L       E+F      P +  KA 
Sbjct: 76  ALRADIRTPHEEAVFNNIQFMESVHAKSYSSIFSTLNTKAEIEEIFEWTNTNPYLQKKAE 135


>gi|322374376|ref|ZP_08048890.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           sp. C300]
 gi|321279876|gb|EFX56915.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           sp. C300]
          Length = 320

 Score = 68.7 bits (167), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G     +++ +   V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSNKEKDLVGKVFGGLTLLDTMQSETGVQ 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           A+   +  P          F E+VH+ ++  I ++L       E+F      P +  KA 
Sbjct: 76  ALRADIRTPHEEAVFNNIQFMESVHAKSYSSIFSTLNTKAEIEEIFEWTNTNPYLQRKAE 135


>gi|254819781|ref|ZP_05224782.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           intracellulare ATCC 13950]
          Length = 322

 Score = 68.7 bits (167), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 53/127 (41%), Gaps = 7/127 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN-NIVL 102
           + +     N W+P +VP+ +D A W++   LT  E+    R        ++  A    V 
Sbjct: 24  QVWDRLTGNFWLPEKVPLSNDSASWQT---LTAQEQQTTVRVFTGLTLLDTTQATVGAVS 80

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
            I   ++ P     L   AF E+VH+ ++  I ++L       + F+     P +  KA 
Sbjct: 81  MIADAVT-PHEEAVLTNIAFMESVHAKSYSSIFSTLCSTRQIDDAFDWSERNPHLQRKAQ 139

Query: 161 WALQYTQ 167
             + Y +
Sbjct: 140 IVVDYYR 146


>gi|295398337|ref|ZP_06808379.1| ribonucleotide-diphosphate reductase subunit beta [Aerococcus
           viridans ATCC 11563]
 gi|294973476|gb|EFG49261.1| ribonucleotide-diphosphate reductase subunit beta [Aerococcus
           viridans ATCC 11563]
          Length = 317

 Score = 68.7 bits (167), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 5/117 (4%)

Query: 46  YLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIY 105
           +  A    W+ T VP+ +DL  WK    L+  E+ ++K+ +G  A  ++L +   + A+ 
Sbjct: 20  WDKATAQFWLDTRVPVSNDLLEWKK---LSTMEKEIVKKAVGGLALLDTLQSEEGLYALK 76

Query: 106 RHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKAN 160
           +H    + R  L    F E++H+ T+  I+ SL    D  E+++     P +  KA 
Sbjct: 77  KHARTQKERAVLSNFMFMESIHAKTYGTILISLNTFKDIEEIYDWMNNDPMMQFKAE 133


>gi|253772463|ref|YP_003035294.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254162613|ref|YP_003045721.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           B str. REL606]
 gi|297519661|ref|ZP_06938047.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           OP50]
 gi|242378238|emb|CAQ33013.1| nrdF, subunit of ribonucleoside-diphosphate reductase 2, beta
           subunit dimer and ribonucleoside-diphosphate reductase 2
           [Escherichia coli BL21(DE3)]
 gi|253323507|gb|ACT28109.1| Ribonucleoside-diphosphate reductase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253974514|gb|ACT40185.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli
           B str. REL606]
 gi|253978681|gb|ACT44351.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli
           BL21(DE3)]
          Length = 319

 Score = 68.7 bits (167), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   LT  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LTVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|209762238|gb|ACI79431.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia
           coli]
 gi|320646030|gb|EFX15007.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H- str. 493-89]
 gi|320651330|gb|EFX19761.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H- str. H 2687]
          Length = 319

 Score = 68.7 bits (167), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   LT  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LTVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|323941488|gb|EGB37671.1| ribonucleotide reductase [Escherichia coli E482]
          Length = 319

 Score = 68.7 bits (167), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 54/137 (39%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+ +W++   LT  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPVWQT---LTVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|319408170|emb|CBI81823.1| ribonucleoside-diphosphate reductase beta chain [Bartonella
           schoenbuchensis R1]
          Length = 324

 Score = 68.7 bits (167), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 59/146 (40%), Gaps = 8/146 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W S   LT++ER +  R        +++      ++
Sbjct: 26  EVWNRLTGNFWLPEKVPLSNDIPSWAS---LTEEERKLTIRVFTGLTLLDTVQNTVGAIS 82

Query: 104 IY-RHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKAN 160
           +    ++  E        AF EAVH+ ++  I ++L    +  + F    E  ++  KA 
Sbjct: 83  LMADAITEHEEAVLTNI-AFMEAVHARSYSSIFSTLCSTAEVDDAFRWSEENANLQKKAT 141

Query: 161 WALQYTQTLSSPSFHYWNKRRRSRIL 186
             L+  +  S P             L
Sbjct: 142 LVLERYEA-SDPLKKKIASTLLESFL 166


>gi|291284009|ref|YP_003500827.1| Ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli O55:H7 str. CB9615]
 gi|290763882|gb|ADD57843.1| Ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli O55:H7 str. CB9615]
          Length = 319

 Score = 68.7 bits (167), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   LT  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LTVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|24113980|ref|NP_708490.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           flexneri 2a str. 301]
 gi|30064043|ref|NP_838214.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           flexneri 2a str. 2457T]
 gi|110806691|ref|YP_690211.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           flexneri 5 str. 8401]
 gi|24053093|gb|AAN44197.1| ribonucleoside-diphosphate reductase 2, beta chain [Shigella
           flexneri 2a str. 301]
 gi|30042299|gb|AAP18024.1| ribonucleoside-diphosphate reductase 2, beta chain [Shigella
           flexneri 2a str. 2457T]
 gi|110616239|gb|ABF04906.1| ribonucleoside-diphosphate reductase 2, beta chain [Shigella
           flexneri 5 str. 8401]
 gi|281602052|gb|ADA75036.1| Ribonucleoside-diphosphate reductase 2, beta chain [Shigella
           flexneri 2002017]
 gi|313648326|gb|EFS12770.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella
           flexneri 2a str. 2457T]
          Length = 319

 Score = 68.7 bits (167), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   LT  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LTVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|254037718|ref|ZP_04871776.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
           1_1_43]
 gi|226839342|gb|EEH71363.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
           1_1_43]
          Length = 319

 Score = 68.3 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   LT  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LTVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALMPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|16130590|ref|NP_417162.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Escherichia coli str. K-12 substr. MG1655]
 gi|74313247|ref|YP_311666.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sonnei
           Ss046]
 gi|89109469|ref|AP_003249.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           [Escherichia coli str. K-12 substr. W3110]
 gi|157162127|ref|YP_001459445.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           HS]
 gi|170019072|ref|YP_001724026.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           ATCC 8739]
 gi|170082262|ref|YP_001731582.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Escherichia coli str. K-12 substr. DH10B]
 gi|188492563|ref|ZP_02999833.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 53638]
 gi|193065983|ref|ZP_03047042.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E22]
 gi|193070996|ref|ZP_03051924.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E110019]
 gi|194427830|ref|ZP_03060376.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli B171]
 gi|194439440|ref|ZP_03071516.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 101-1]
 gi|209920120|ref|YP_002294204.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           SE11]
 gi|218696273|ref|YP_002403940.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           55989]
 gi|238901820|ref|YP_002927616.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Escherichia coli BW2952]
 gi|256019542|ref|ZP_05433407.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sp. D9]
 gi|256024812|ref|ZP_05438677.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
           4_1_40B]
 gi|260845324|ref|YP_003223102.1| ribonucleoside-diphosphate reductase 2, beta subunit [Escherichia
           coli O103:H2 str. 12009]
 gi|293448994|ref|ZP_06663415.1| ribonucleoside-diphosphate reductase [Escherichia coli B088]
 gi|300906827|ref|ZP_07124508.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 84-1]
 gi|300916824|ref|ZP_07133528.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 115-1]
 gi|300922750|ref|ZP_07138839.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 182-1]
 gi|300930529|ref|ZP_07145925.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 187-1]
 gi|300949072|ref|ZP_07163119.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 116-1]
 gi|300957447|ref|ZP_07169660.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 175-1]
 gi|301026690|ref|ZP_07190101.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 196-1]
 gi|301306007|ref|ZP_07212087.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 124-1]
 gi|301327384|ref|ZP_07220633.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 78-1]
 gi|301645345|ref|ZP_07245292.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 146-1]
 gi|307139368|ref|ZP_07498724.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           H736]
 gi|307314435|ref|ZP_07594040.1| Ribonucleoside-diphosphate reductase [Escherichia coli W]
 gi|312973113|ref|ZP_07787286.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli 1827-70]
 gi|331643364|ref|ZP_08344495.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H736]
 gi|331669414|ref|ZP_08370260.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA271]
 gi|331678654|ref|ZP_08379328.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H591]
 gi|2507306|sp|P37146|RIR4_ECOLI RecName: Full=Ribonucleoside-diphosphate reductase 2 subunit beta;
           AltName: Full=R2F protein; AltName: Full=Ribonucleotide
           reductase 2
 gi|303325061|pdb|3N37|A Chain A, Ribonucleotide Reductase Dimanganese(Ii)-Nrdf From
           Escherichia Coli
 gi|303325062|pdb|3N38|A Chain A, Ribonucleotide Reductase Nrdf From Escherichia Coli Soaked
           With Ferrous Ions
 gi|303325063|pdb|3N39|B Chain B, Ribonucleotide Reductase Dimanganese(Ii)-Nrdf From
           Escherichia Coli In Complex With Nrdi
 gi|303325065|pdb|3N39|A Chain A, Ribonucleotide Reductase Dimanganese(Ii)-Nrdf From
           Escherichia Coli In Complex With Nrdi
 gi|303325067|pdb|3N3A|B Chain B, Ribonucleotide Reductase Dimanganese(Ii)-Nrdf From
           Escherichia Coli In Complex With Reduced Nrdi
 gi|303325069|pdb|3N3A|A Chain A, Ribonucleotide Reductase Dimanganese(Ii)-Nrdf From
           Escherichia Coli In Complex With Reduced Nrdi
 gi|303325071|pdb|3N3B|B Chain B, Ribonucleotide Reductase Dimanganese(Ii)-Nrdf From
           Escherichia Coli In Complex With Reduced Nrdi With A
           Trapped Peroxide
 gi|303325073|pdb|3N3B|A Chain A, Ribonucleotide Reductase Dimanganese(Ii)-Nrdf From
           Escherichia Coli In Complex With Reduced Nrdi With A
           Trapped Peroxide
 gi|1789031|gb|AAC75723.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Escherichia coli str. K-12 substr. MG1655]
 gi|1800064|dbj|BAA16541.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           [Escherichia coli str. K12 substr. W3110]
 gi|73856724|gb|AAZ89431.1| ribonucleoside-diphosphate reductase 2, beta chain, frag [Shigella
           sonnei Ss046]
 gi|157067807|gb|ABV07062.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli HS]
 gi|169754000|gb|ACA76699.1| Ribonucleoside-diphosphate reductase [Escherichia coli ATCC 8739]
 gi|169890097|gb|ACB03804.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Escherichia coli str. K-12 substr. DH10B]
 gi|188487762|gb|EDU62865.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 53638]
 gi|192926397|gb|EDV81032.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E22]
 gi|192955654|gb|EDV86129.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E110019]
 gi|194414063|gb|EDX30339.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli B171]
 gi|194421616|gb|EDX37627.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli 101-1]
 gi|209762244|gb|ACI79434.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia
           coli]
 gi|209913379|dbj|BAG78453.1| ribonucleoside-diphosphate reductase beta subunit [Escherichia coli
           SE11]
 gi|218353005|emb|CAU98821.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           [Escherichia coli 55989]
 gi|238863480|gb|ACR65478.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Escherichia coli BW2952]
 gi|257760471|dbj|BAI31968.1| ribonucleoside-diphosphate reductase 2, beta subunit [Escherichia
           coli O103:H2 str. 12009]
 gi|291322084|gb|EFE61513.1| ribonucleoside-diphosphate reductase [Escherichia coli B088]
 gi|299879612|gb|EFI87823.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 196-1]
 gi|300315803|gb|EFJ65587.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 175-1]
 gi|300401428|gb|EFJ84966.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 84-1]
 gi|300415890|gb|EFJ99200.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 115-1]
 gi|300420935|gb|EFK04246.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 182-1]
 gi|300451458|gb|EFK15078.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 116-1]
 gi|300461585|gb|EFK25078.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 187-1]
 gi|300838718|gb|EFK66478.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 124-1]
 gi|300846038|gb|EFK73798.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 78-1]
 gi|301076379|gb|EFK91185.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 146-1]
 gi|306906003|gb|EFN36524.1| Ribonucleoside-diphosphate reductase [Escherichia coli W]
 gi|309703041|emb|CBJ02373.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli
           ETEC H10407]
 gi|310333055|gb|EFQ00269.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli 1827-70]
 gi|315061957|gb|ADT76284.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           [Escherichia coli W]
 gi|315254452|gb|EFU34420.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 85-1]
 gi|315615063|gb|EFU95700.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli 3431]
 gi|320198428|gb|EFW73030.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           EC4100B]
 gi|320656721|gb|EFX24609.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O55:H7 str. 3256-97 TW 07815]
 gi|320662264|gb|EFX29661.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O55:H7 str. USDA 5905]
 gi|320667315|gb|EFX34273.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. LSU-61]
 gi|323173041|gb|EFZ58672.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli LT-68]
 gi|323183202|gb|EFZ68599.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli 1357]
 gi|323377462|gb|ADX49730.1| Ribonucleoside-diphosphate reductase [Escherichia coli KO11]
 gi|323935630|gb|EGB31947.1| ribonucleotide reductase [Escherichia coli E1520]
 gi|323946352|gb|EGB42381.1| ribonucleotide reductase [Escherichia coli H120]
 gi|323960578|gb|EGB56205.1| ribonucleotide reductase [Escherichia coli H489]
 gi|323971479|gb|EGB66714.1| ribonucleotide reductase [Escherichia coli TA007]
 gi|324020305|gb|EGB89524.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 117-3]
 gi|324120035|gb|EGC13912.1| ribonucleotide reductase [Escherichia coli E1167]
 gi|331036835|gb|EGI09059.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H736]
 gi|331063082|gb|EGI34995.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA271]
 gi|331073484|gb|EGI44805.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H591]
 gi|332103018|gb|EGJ06364.1| ribonucleotide-diphosphate reductase subunit beta [Shigella sp. D9]
          Length = 319

 Score = 68.3 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   LT  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LTVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|313890786|ref|ZP_07824411.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pseudoporcinus SPIN 20026]
 gi|313120887|gb|EFR44001.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           pseudoporcinus SPIN 20026]
          Length = 319

 Score = 68.3 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 57/133 (42%), Gaps = 8/133 (6%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           + N++  +     WEK        W+ T +P+ +DL  W+    L+D E+ ++ +  G  
Sbjct: 9   NWNEIEDVIDKSTWEKLTEQ---FWLDTRIPLSNDLDDWRK---LSDQEKDLVGKVFGGL 62

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFN 147
              +++ +   V AI   +  P     L    F E+VH+ ++  I ++L   +   ++F 
Sbjct: 63  TLLDTMQSETGVEAIRADIRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKKEIEDIFE 122

Query: 148 MYREVPSITAKAN 160
                  +  KA 
Sbjct: 123 WTNNNEFLQKKAK 135


>gi|15803196|ref|NP_289228.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 EDL933]
 gi|15832793|ref|NP_311566.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. Sakai]
 gi|168750919|ref|ZP_02775941.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4113]
 gi|168755421|ref|ZP_02780428.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4401]
 gi|168762471|ref|ZP_02787478.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4501]
 gi|168768767|ref|ZP_02793774.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4486]
 gi|168774792|ref|ZP_02799799.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4196]
 gi|168778658|ref|ZP_02803665.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4076]
 gi|168787931|ref|ZP_02812938.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC869]
 gi|168800561|ref|ZP_02825568.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC508]
 gi|195938430|ref|ZP_03083812.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. EC4024]
 gi|208808703|ref|ZP_03251040.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4206]
 gi|208813382|ref|ZP_03254711.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4045]
 gi|208819985|ref|ZP_03260305.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4042]
 gi|209400851|ref|YP_002272142.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4115]
 gi|217327155|ref|ZP_03443238.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. TW14588]
 gi|254794623|ref|YP_003079460.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. TW14359]
 gi|261225973|ref|ZP_05940254.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Escherichia coli O157:H7 str. FRIK2000]
 gi|261256769|ref|ZP_05949302.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Escherichia coli O157:H7 str. FRIK966]
 gi|12517115|gb|AAG57786.1|AE005496_9 ribonucleoside-diphosphate reductase 2, beta chain [Escherichia
           coli O157:H7 str. EDL933]
 gi|13363010|dbj|BAB36962.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli
           O157:H7 str. Sakai]
 gi|187769524|gb|EDU33368.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4196]
 gi|188015002|gb|EDU53124.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4113]
 gi|189003218|gb|EDU72204.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4076]
 gi|189357305|gb|EDU75724.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4401]
 gi|189362069|gb|EDU80488.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4486]
 gi|189367242|gb|EDU85658.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4501]
 gi|189372097|gb|EDU90513.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC869]
 gi|189377142|gb|EDU95558.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC508]
 gi|208728504|gb|EDZ78105.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4206]
 gi|208734659|gb|EDZ83346.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4045]
 gi|208740108|gb|EDZ87790.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4042]
 gi|209162251|gb|ACI39684.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. EC4115]
 gi|209762240|gb|ACI79432.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia
           coli]
 gi|209762242|gb|ACI79433.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia
           coli]
 gi|209762246|gb|ACI79435.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia
           coli]
 gi|217319522|gb|EEC27947.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli O157:H7 str. TW14588]
 gi|254594023|gb|ACT73384.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Escherichia coli O157:H7 str. TW14359]
 gi|320189007|gb|EFW63666.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. EC1212]
 gi|320640665|gb|EFX10201.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. G5101]
 gi|326338609|gb|EGD62435.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. 1044]
 gi|326342863|gb|EGD66631.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O157:H7 str. 1125]
          Length = 319

 Score = 68.3 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   LT  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LTVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|187734239|ref|YP_001881572.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii
           CDC 3083-94]
 gi|187431231|gb|ACD10505.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella boydii
           CDC 3083-94]
          Length = 319

 Score = 68.3 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   LT  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LTVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|323159821|gb|EFZ45793.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli E128010]
          Length = 319

 Score = 68.3 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   LT  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LTVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|319404590|emb|CBI78196.1| ribonucleoside-diphosphate reductase beta chain [Bartonella
           rochalimae ATCC BAA-1498]
 gi|319407580|emb|CBI81230.1| ribonucleoside-diphosphate reductase beta chain [Bartonella sp.
           1-1C]
          Length = 324

 Score = 68.3 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 55/129 (42%), Gaps = 5/129 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W S   LT++ER +  R        +++      ++
Sbjct: 26  EVWNRLTGNFWLPEKVPLSNDIPSWAS---LTEEERKLTIRVFTGLTLLDTVQNTVGAIS 82

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANW 161
           +            L   AF EAVH+ ++  I ++L   ++  + F    E   +  KA  
Sbjct: 83  LMADAVTEHEEAVLTNIAFMEAVHARSYSSIFSTLCSTVEVDDAFRWSEENTYLQKKARL 142

Query: 162 ALQYTQTLS 170
            L++ +   
Sbjct: 143 ILEHYEADE 151


>gi|312173339|emb|CBX81594.1| ribonucleoside-diphosphate reductase 2 beta chain [Erwinia
           amylovora ATCC BAA-2158]
          Length = 319

 Score = 68.3 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 54/134 (40%), Gaps = 5/134 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +D+  W   N ++ DE+ +  R        
Sbjct: 10  NWNKIEDDKDLEVWNRLTSNFWLPEKVPLSNDIPSW---NSISADEQQLTIRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++       A+      P     +   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTIQNTLGAPALMADALTPHEEAVMSNISFMEAVHARSYSSIFSTLCHTSDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQ 164
           +   + AKA   LQ
Sbjct: 127 DNAPLQAKAQIILQ 140


>gi|37525251|ref|NP_928595.1| ribonucleotide-diphosphate reductase subunit beta [Photorhabdus
           luminescens subsp. laumondii TTO1]
 gi|36784678|emb|CAE13578.1| ribonucleoside-diphosphate reductase 2 beta chain (ribonucleotide
           reductase 2) (R2f protein) [Photorhabdus luminescens
           subsp. laumondii TTO1]
          Length = 319

 Score = 68.3 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 66/163 (40%), Gaps = 11/163 (6%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +     N W+P ++P+ +D+  W   N LT +E+ +  R        
Sbjct: 10  NWNRIEDDKDLEVWNRLTTNFWLPEKIPLSNDITSW---NTLTTEEKKLTIRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYR 150
           +++       A+      P     +   +F EAVH+ ++  I ++L L  D  + +    
Sbjct: 67  DTIQNTVGAPALMEDALTPHEEAVMSNISFMEAVHARSYSSIFSTLCLTTDVDDAYRWSE 126

Query: 151 EVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           +  S+  KA   L Y       S+H+  K++ + +   S  F 
Sbjct: 127 KSFSLQNKAKIILNYY------SYHHPLKKKIASVFLESFLFY 163


>gi|320173468|gb|EFW48667.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           dysenteriae CDC 74-1112]
          Length = 319

 Score = 68.3 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   LT  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LTVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|293415927|ref|ZP_06658567.1| ribonucleoside-diphosphate reductase [Escherichia coli B185]
 gi|291432116|gb|EFF05098.1| ribonucleoside-diphosphate reductase [Escherichia coli B185]
          Length = 319

 Score = 68.3 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   LT  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LTVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|260448266|gb|ACX38688.1| Ribonucleoside-diphosphate reductase [Escherichia coli DH1]
 gi|315137289|dbj|BAJ44448.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           DH1]
          Length = 319

 Score = 68.3 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   LT  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LTVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|319406095|emb|CBI79725.1| ribonucleoside-diphosphate reductase beta chain [Bartonella sp. AR
           15-3]
          Length = 324

 Score = 68.3 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 56/128 (43%), Gaps = 7/128 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN-NIVL 102
           E +     N W+P +VP+ +D+  W S   LT++ER +  R        +++      + 
Sbjct: 26  EVWNRLTGNFWLPEKVPLSNDIPSWAS---LTEEERKLTIRVFTGLTLLDTVQNTVGAIS 82

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKAN 160
            I   ++  E        AF EAVH+ ++  I ++L   ++  + F    E   +  KA 
Sbjct: 83  LIADAVTEHEEAVLTNI-AFMEAVHARSYSSIFSTLCSTVEVDDAFRWSEENTYLQKKAR 141

Query: 161 WALQYTQT 168
             L++ + 
Sbjct: 142 LILEHYEA 149


>gi|315658919|ref|ZP_07911786.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           lugdunensis M23590]
 gi|315496043|gb|EFU84371.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           lugdunensis M23590]
          Length = 322

 Score = 68.3 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 16/139 (11%)

Query: 25  LNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR 84
            N + D+  +           +    +  W+ TE  +  D+A WK+   LTDDER   KR
Sbjct: 6   WNTQEDMTNMF----------WRQNISQMWVETEFKVSKDIASWKT---LTDDERNTFKR 52

Query: 85  NLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DE 142
            L      ++  A++ +  I  H ++   +      A  E +H+ ++ +I T+L    + 
Sbjct: 53  ALAGLTGLDTHQADDGMPLIMLHTTDLRKKAVYSFMAMMEQIHAKSYSHIFTTLLPSSET 112

Query: 143 GELFNMYR-EVPSITAKAN 160
             L + +  E P +  KA+
Sbjct: 113 NYLLDTWVIEEPHLKYKAD 131


>gi|270339459|ref|YP_003331539.1| ribonucleotide reductase subunit 2 [Felid herpesvirus 1]
 gi|254940175|gb|ACT88318.1| ribonucleotide reductase subunit 2 [Felid herpesvirus 1]
          Length = 331

 Score = 68.3 bits (166), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 49/141 (34%), Gaps = 8/141 (5%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                    +  N W+ T++P+ DD+        L++ E    +    F ++++ LV  N
Sbjct: 38  PDINMLRSLSIANRWLETDLPIGDDIKD---VTTLSESELDFYRFLFTFLSAADDLVNLN 94

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR----EVPSI 155
           +   +    +  +   Y + Q   E VHS  +  I   L   + E    Y       P +
Sbjct: 95  LG-NLSELFTQKDILHYYIEQECIEVVHSRVYSAIQLLLFKCDAEARTAYVDSMITKPEL 153

Query: 156 TAKANWALQYTQTLSSPSFHY 176
             K  W         S +  Y
Sbjct: 154 ARKVEWLRTRIGECESIAEKY 174


>gi|289551411|ref|YP_003472315.1| Ribonucleotide reductase of class Ib (aerobic), beta subunit
           [Staphylococcus lugdunensis HKU09-01]
 gi|289180942|gb|ADC88187.1| Ribonucleotide reductase of class Ib (aerobic), beta subunit
           [Staphylococcus lugdunensis HKU09-01]
          Length = 322

 Score = 68.3 bits (166), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 16/139 (11%)

Query: 25  LNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR 84
            N + D+  +           +    +  W+ TE  +  D+A WK+   LTDDER   KR
Sbjct: 6   WNTQEDMTNMF----------WRQNISQMWVETEFKVSKDIASWKT---LTDDERNTFKR 52

Query: 85  NLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DE 142
            L      ++  A++ +  I  H ++   +      A  E +H+ ++ +I T+L    + 
Sbjct: 53  ALAGLTGLDTHQADDGMPLIMLHTTDLRKKAVYAFMAMMEQIHAKSYSHIFTTLLPSSET 112

Query: 143 GELFNMYR-EVPSITAKAN 160
             L + +  E P +  KA+
Sbjct: 113 NYLLDTWVIEEPHLKYKAD 131


>gi|26249071|ref|NP_755111.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           CFT073]
 gi|227888210|ref|ZP_04006015.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           83972]
 gi|300986153|ref|ZP_07177743.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 45-1]
 gi|301050518|ref|ZP_07197394.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 185-1]
 gi|26109478|gb|AAN81681.1|AE016765_83 Ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli
           CFT073]
 gi|227834850|gb|EEJ45316.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           83972]
 gi|300297774|gb|EFJ54159.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 185-1]
 gi|300407907|gb|EFJ91445.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 45-1]
 gi|307554652|gb|ADN47427.1| ribonucleotide-diphosphate reductase beta subunit [Escherichia coli
           ABU 83972]
 gi|315290985|gb|EFU50350.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 153-1]
          Length = 319

 Score = 68.3 bits (166), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAILSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|157159438|ref|YP_001463986.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           E24377A]
 gi|218555224|ref|YP_002388137.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           IAI1]
 gi|300815921|ref|ZP_07096145.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 107-1]
 gi|157081468|gb|ABV21176.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli E24377A]
 gi|218361992|emb|CAQ99598.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           [Escherichia coli IAI1]
 gi|300531850|gb|EFK52912.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 107-1]
          Length = 319

 Score = 68.3 bits (166), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   LT  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LTVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|90407600|ref|ZP_01215781.1| ribonucleoside-diphosphate reductase beta chain [Psychromonas sp.
           CNPT3]
 gi|90311303|gb|EAS39407.1| ribonucleoside-diphosphate reductase beta chain [Psychromonas sp.
           CNPT3]
          Length = 424

 Score = 68.3 bits (166), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 61/162 (37%), Gaps = 13/162 (8%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
              L P +Y    E   +  +++W+ TE     D+  +K    L+  ER +IKR +   +
Sbjct: 107 RINLKPYEYPEILEYVDAIRHSYWIHTEFNFTSDIQDFK--VRLSHPEREVIKRTMLAIS 164

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
             E  V       IY  +  PE        A  E  H   + +++  LGL++   F+   
Sbjct: 165 QIEVSVKTFWG-NIYTKMPKPEIGSVGATFAESEVRHHDAYSHLLEILGLNDE--FSKLE 221

Query: 151 EVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           E P I  +    ++Y ++       + N           L F
Sbjct: 222 ENPDIMTR----VRYLESA----LKHANSEDNKEYSESILLF 255


>gi|194433043|ref|ZP_03065326.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella
           dysenteriae 1012]
 gi|194418770|gb|EDX34856.1| ribonucleoside-diphosphate reductase, beta subunit [Shigella
           dysenteriae 1012]
 gi|320180201|gb|EFW55137.1| ribonucleotide-diphosphate reductase subunit beta [Shigella boydii
           ATCC 9905]
 gi|332088601|gb|EGI93714.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella
           dysenteriae 155-74]
          Length = 319

 Score = 68.3 bits (166), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   LT  E+ +  R        
Sbjct: 10  NWNKITDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LTVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|319899230|ref|YP_004159323.1| ribonucleoside-diphosphate reductase beta chain [Bartonella
           clarridgeiae 73]
 gi|319403194|emb|CBI76753.1| ribonucleoside-diphosphate reductase beta chain [Bartonella
           clarridgeiae 73]
          Length = 324

 Score = 67.9 bits (165), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 55/127 (43%), Gaps = 5/127 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W S   LT++ER +  R        +++      ++
Sbjct: 26  EVWNRLTGNFWLPEKVPLSNDIPSWAS---LTEEERKLTIRVFTGLTLLDTVQNTVGAIS 82

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANW 161
           +            L   AF EAVH+ ++  I ++L   ++  + F    E   +  KA  
Sbjct: 83  LMADAVTEHEEAVLTNIAFMEAVHARSYSSIFSTLCSTVEVDDAFRWSEENTYLQKKARL 142

Query: 162 ALQYTQT 168
            L++ + 
Sbjct: 143 ILEHYEA 149


>gi|49473850|ref|YP_031892.1| ribonucleotide-diphosphate reductase subunit beta [Bartonella
           quintana str. Toulouse]
 gi|49239353|emb|CAF25686.1| Ribonucleotide reductase beta-chain [Bartonella quintana str.
           Toulouse]
          Length = 324

 Score = 67.9 bits (165), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 59/146 (40%), Gaps = 8/146 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W S   LT++ER +  R        +++      ++
Sbjct: 26  EVWNRLTGNFWLPEKVPLSNDIPSWAS---LTEEERKLTVRVFTGLTLLDTIQNTVGAIS 82

Query: 104 IY-RHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKAN 160
           +    ++  E        AF EAVH+ ++  I ++L   ++  + F    E   +  KA 
Sbjct: 83  LMADAITEHEEAVLTNI-AFMEAVHARSYSSIFSTLCSTVEVDDAFRWSEENIHLQKKAR 141

Query: 161 WALQYTQTLSSPSFHYWNKRRRSRIL 186
             L+  +  S P             L
Sbjct: 142 LVLERYEA-SDPLKKKIASTLLESFL 166


>gi|3183695|emb|CAA07027.1| ribonucleotide reductase small subunit [Felid herpesvirus 1]
          Length = 331

 Score = 67.9 bits (165), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 49/141 (34%), Gaps = 8/141 (5%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                    +  N W+ T++P+ DD+        L++ E    +    F ++++ LV  N
Sbjct: 38  PDINMLRSLSIANRWLETDLPIGDDIKD---ITTLSESELDFYRFLFTFLSAADDLVNLN 94

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR----EVPSI 155
           +   +    +  +   Y + Q   E VHS  +  I   L   + E    Y       P +
Sbjct: 95  LG-NLSELFTQKDILHYYIEQECIEVVHSRVYSAIQLLLFKCDAEARTAYVDSMITKPEL 153

Query: 156 TAKANWALQYTQTLSSPSFHY 176
             K  W         S +  Y
Sbjct: 154 ARKVEWLRTRIGECESIAEKY 174


>gi|110642801|ref|YP_670531.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           536]
 gi|191171432|ref|ZP_03032981.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli F11]
 gi|300990601|ref|ZP_07179251.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 200-1]
 gi|110344393|gb|ABG70630.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli
           536]
 gi|190908366|gb|EDV67956.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli F11]
 gi|300305718|gb|EFJ60238.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 200-1]
 gi|324014406|gb|EGB83625.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 60-1]
          Length = 319

 Score = 67.9 bits (165), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 55/156 (35%), Gaps = 6/156 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRIL 186
           E   +  KA    Q+ +    P             L
Sbjct: 127 ENAPLQRKAQIIQQHYRG-DDPLKKKITSVFLESFL 161


>gi|50313261|ref|YP_053065.1| ribonucleotide reductase subunit 2 [Equid herpesvirus 1]
 gi|132625|sp|P28847|RIR2_EHV1B RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|42795147|gb|AAS45904.1| small subunit of ribonucleotide reductase [Equid herpesvirus 1]
 gi|49617004|gb|AAT67277.1| ribonucleotide reductase RR2 [Equid herpesvirus 1]
          Length = 321

 Score = 67.9 bits (165), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 44/126 (34%), Gaps = 8/126 (6%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                    +  N W+ T++P+ DDL        LT  ER   +    F ++++ LV  N
Sbjct: 28  PDIEHLRSLSVANRWLDTDLPISDDLKD---VAKLTPAEREFYRFLFAFLSAADDLVNLN 84

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI-ITSLGLD---EGELFNMYREVPSI 155
           +   +    +  +   Y + Q   E  HS  +  I +   G D               +I
Sbjct: 85  LGD-LSALFTQKDILHYYIEQESIEVTHSRVYSAIQLMLFGNDAAARARYVASIIGDAAI 143

Query: 156 TAKANW 161
             K  W
Sbjct: 144 GRKVAW 149


>gi|312865304|ref|ZP_07725532.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           downei F0415]
 gi|311099415|gb|EFQ57631.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           downei F0415]
          Length = 316

 Score = 67.9 bits (165), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 5/125 (4%)

Query: 46  YLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIY 105
           +  A    W+ T VP+ +DL  WK    L+D E+ ++K+ +G  A  ++L +   + AI 
Sbjct: 20  WDKATAQFWLDTRVPVSNDLLDWKQ---LSDLEKTVVKKAVGGLALLDTLQSEEGLYAIK 76

Query: 106 RHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANWAL 163
           ++    +         F E++H+ T+  I+ SL    D   +++     P +  KA    
Sbjct: 77  KNARTQKELAVFSDFNFMESIHAKTYGTILISLNTFKDIEAIYDWMDNDPRMQFKAQRVN 136

Query: 164 QYTQT 168
            Y Q 
Sbjct: 137 DYYQN 141


>gi|171779598|ref|ZP_02920554.1| hypothetical protein STRINF_01435 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281700|gb|EDT47134.1| hypothetical protein STRINF_01435 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 138

 Score = 67.9 bits (165), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 56/133 (42%), Gaps = 8/133 (6%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           + N++  +     WEK        W+ T +P+ +DL  W+    L+D E+ ++ +  G  
Sbjct: 9   NWNEIEDVIDKSTWEKLTEQ---FWLDTRIPLSNDLDDWRK---LSDQEKDLVGKVFGGL 62

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFN 147
              +++ + + V AI   +  P     L    F E+VH+ ++  I ++L       E+F 
Sbjct: 63  TLLDTMQSESGVEAIRADVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKSEIEEIFE 122

Query: 148 MYREVPSITAKAN 160
                  +  K  
Sbjct: 123 WTNNNEYLQKKDQ 135


>gi|319440834|ref|ZP_07989990.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           variabile DSM 44702]
          Length = 316

 Score = 67.9 bits (165), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 54/137 (39%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P ++P+ +D+  W++   L++ E+    R        
Sbjct: 7   DWNRIEDDKDLEVWNRLTSNFWLPEKIPLSNDVQSWRT---LSEVEQATTMRVFAGLTYL 63

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYR 150
           +++ +      + R    P          F E+VH+ ++  I  +L       + F    
Sbjct: 64  DTIQSAIGAPVLARDAVTPHEEAVFANIHFMESVHARSYSSIFQTLATTPQINDAFRWVE 123

Query: 151 EVPSITAKANWALQYTQ 167
           E P++  K +  + + +
Sbjct: 124 EDPNMIYKRDRVISFYE 140


>gi|170684037|ref|YP_001744827.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           SMS-3-5]
 gi|170521755|gb|ACB19933.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli SMS-3-5]
          Length = 319

 Score = 67.9 bits (165), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|261868068|ref|YP_003255990.1| ribonucleoside-diphosphate reductase subunit beta [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|293389919|ref|ZP_06634253.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|261413400|gb|ACX82771.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|290950453|gb|EFE00572.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 329

 Score = 67.9 bits (165), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 62/164 (37%), Gaps = 14/164 (8%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
           +   ++ P +Y    E   +  +++W+ TE     D+  +++   ++D ER +I + +  
Sbjct: 11  TPRFEIKPYEYPELLEFKDAIRHSYWLHTEFNFTGDIQDFRT--HISDVERAVITKTMLA 68

Query: 89  FASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNM 148
            +  E  V       +Y +   PE           E  H   + +++  LGL   E+F  
Sbjct: 69  ISQIEVSV-KRFWGNLYNYFPKPEIEDVGGSFLESEIRHKDAYSFLLEKLGL--NEMFRN 125

Query: 149 YREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
            R+  +I A+  +   + +              +   +   + F
Sbjct: 126 VRQYKAIMARIEYMEAFMRKKD---------VSQQDFVLSLVMF 160


>gi|149408186|ref|YP_001294620.1| hypothetical protein ORF027 [Pseudomonas phage PA11]
          Length = 322

 Score = 67.9 bits (165), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 46/128 (35%), Gaps = 4/128 (3%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
             Y  A +      +  W   E+ ++ D+     +  +T+ E   +   L  F   E + 
Sbjct: 13  FDYPEAIQFAKVQSSIFWTDDEINVEKDIQD--IRVNMTEAEAHGVITTLRLFTLYELVA 70

Query: 97  ANNIVL-AIYRHLSNPECRQYLLRQAFEE-AVHSHTFQYIITSLGLDEGELFNMYREVPS 154
             +  L  + +    P+  +      F E  VH+  +  I  +L L+  E +  Y   P 
Sbjct: 71  GRDYWLGRVLKTFPRPDIERMAATFGFFELNVHAPFYNKINEALMLNTDEFYLAYVNDPI 130

Query: 155 ITAKANWA 162
           +  +  + 
Sbjct: 131 LKERMEFV 138


>gi|260869355|ref|YP_003235757.1| ribonucleoside-diphosphate reductase 2, beta subunit [Escherichia
           coli O111:H- str. 11128]
 gi|257765711|dbj|BAI37206.1| ribonucleoside-diphosphate reductase 2, beta subunit [Escherichia
           coli O111:H- str. 11128]
 gi|323180097|gb|EFZ65649.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli 1180]
          Length = 319

 Score = 67.9 bits (165), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|191167101|ref|ZP_03028922.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli B7A]
 gi|260856787|ref|YP_003230678.1| ribonucleoside-diphosphate reductase 2, beta subunit [Escherichia
           coli O26:H11 str. 11368]
 gi|309795135|ref|ZP_07689554.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 145-7]
 gi|331664233|ref|ZP_08365139.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA143]
 gi|190902883|gb|EDV62611.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli B7A]
 gi|257755436|dbj|BAI26938.1| ribonucleoside-diphosphate reductase 2, beta subunit [Escherichia
           coli O26:H11 str. 11368]
 gi|308121106|gb|EFO58368.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 145-7]
 gi|323154887|gb|EFZ41079.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli EPECa14]
 gi|331058164|gb|EGI30145.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA143]
          Length = 319

 Score = 67.9 bits (165), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|306812443|ref|ZP_07446641.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           NC101]
 gi|222034376|emb|CAP77117.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli LF82]
 gi|305854481|gb|EFM54919.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           NC101]
 gi|312947211|gb|ADR28038.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O83:H1 str. NRG 857C]
          Length = 319

 Score = 67.9 bits (165), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|218706176|ref|YP_002413695.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           UMN026]
 gi|293406173|ref|ZP_06650099.1| ribonucleotide reductase beta subunit [Escherichia coli FVEC1412]
 gi|298381910|ref|ZP_06991507.1| ribonucleoside-diphosphate reductase subunit beta [Escherichia coli
           FVEC1302]
 gi|300898656|ref|ZP_07116977.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 198-1]
 gi|301019059|ref|ZP_07183270.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 69-1]
 gi|331674197|ref|ZP_08374957.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA280]
 gi|218433273|emb|CAR14173.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           [Escherichia coli UMN026]
 gi|291426179|gb|EFE99211.1| ribonucleotide reductase beta subunit [Escherichia coli FVEC1412]
 gi|298277050|gb|EFI18566.1| ribonucleoside-diphosphate reductase subunit beta [Escherichia coli
           FVEC1302]
 gi|300357684|gb|EFJ73554.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 198-1]
 gi|300399412|gb|EFJ82950.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 69-1]
 gi|331068291|gb|EGI39686.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA280]
          Length = 319

 Score = 67.9 bits (165), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|331648397|ref|ZP_08349485.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli M605]
 gi|331042144|gb|EGI14286.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli M605]
          Length = 319

 Score = 67.9 bits (165), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|281179683|dbj|BAI56013.1| ribonucleoside-diphosphate reductase beta subunit [Escherichia coli
           SE15]
          Length = 319

 Score = 67.9 bits (165), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|323188442|gb|EFZ73728.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli RN587/1]
          Length = 319

 Score = 67.9 bits (165), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|320546423|ref|ZP_08040738.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           equinus ATCC 9812]
 gi|320448808|gb|EFW89536.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           equinus ATCC 9812]
          Length = 320

 Score = 67.9 bits (165), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 57/133 (42%), Gaps = 8/133 (6%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           + N++  +     WEK        W+ T +P+ +DL  W+    L+D E+ ++ +  G  
Sbjct: 10  NWNEIEDVIDKSTWEKLTEQ---FWLDTRIPLSNDLDDWRK---LSDQEKDLVGKVFGGL 63

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFN 147
              +++ + + V AI   +  P     L    F E+VH+ ++  I ++L        +F 
Sbjct: 64  TLLDTMQSESGVEAIRADVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKSEIEAIFE 123

Query: 148 MYREVPSITAKAN 160
              +   +  KA 
Sbjct: 124 WTNKNEFLQKKAK 136


>gi|22536982|ref|NP_687833.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           agalactiae 2603V/R]
 gi|25010891|ref|NP_735286.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           agalactiae NEM316]
 gi|76788606|ref|YP_329564.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           agalactiae A909]
 gi|76799231|ref|ZP_00781405.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae 18RS21]
 gi|77405557|ref|ZP_00782648.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae H36B]
 gi|77408849|ref|ZP_00785576.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae COH1]
 gi|77413113|ref|ZP_00789313.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae 515]
 gi|22533837|gb|AAM99705.1|AE014229_6 ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           agalactiae 2603V/R]
 gi|23095270|emb|CAD46480.1| Unknown [Streptococcus agalactiae NEM316]
 gi|76563663|gb|ABA46247.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           agalactiae A909]
 gi|76585414|gb|EAO61998.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae 18RS21]
 gi|77160814|gb|EAO71925.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae 515]
 gi|77172535|gb|EAO75677.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae COH1]
 gi|77175864|gb|EAO78642.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae H36B]
 gi|319744839|gb|EFV97177.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           agalactiae ATCC 13813]
          Length = 319

 Score = 67.9 bits (165), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 55/132 (41%), Gaps = 8/132 (6%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           + N++  +     WEK        W+ T +P+ +DL  W+    L+  E+ ++ +  G  
Sbjct: 9   NWNEIEDVIDKSTWEKLTEQ---FWLDTRIPLSNDLDDWRK---LSAQEKDLVGKVFGGL 62

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFN 147
              +++ +   V AI   +  P     L    F E+VH+ ++  I ++L       E+F 
Sbjct: 63  TLLDTMQSETGVEAIRADVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKSEIEEIFE 122

Query: 148 MYREVPSITAKA 159
                  +  KA
Sbjct: 123 WTNNNEFLQEKA 134


>gi|38234435|ref|NP_940202.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           diphtheriae NCTC 13129]
 gi|38200698|emb|CAE50394.1| ribonucleotide reductase beta-chain 1 [Corynebacterium diphtheriae]
          Length = 328

 Score = 67.6 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 49/126 (38%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P ++P+ +D+  W   N L D E+    R        +++      ++
Sbjct: 30  EVWDRLTGNFWLPEKIPVSNDIKSW---NTLNDLEKQTTMRVFTGLTLLDTIQGTVGAVS 86

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +     +          AF E+VH+ ++  I  +L       + F    E  ++  KA  
Sbjct: 87  MLPDAVSLHEEAVYTNIAFMESVHAKSYSNIFMTLASTPEINDAFRWSEENENLQKKAKI 146

Query: 162 ALQYTQ 167
            L Y +
Sbjct: 147 ILSYYE 152


>gi|307625752|gb|ADN70056.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           UM146]
          Length = 319

 Score = 67.6 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|163867489|ref|YP_001608688.1| ribonucleotide-diphosphate reductase subunit beta [Bartonella
           tribocorum CIP 105476]
 gi|161017135|emb|CAK00693.1| ribonucleoside-diphosphate reductase beta chain [Bartonella
           tribocorum CIP 105476]
          Length = 324

 Score = 67.6 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 55/128 (42%), Gaps = 7/128 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN-NIVL 102
           E +     N W+P +VP+ +D+  W S   LT++ER +  R        +++      + 
Sbjct: 26  EVWNRLTGNFWLPEKVPLSNDIPSWSS---LTEEERKLTIRVFTGLTLLDTIQNTVGAIS 82

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKAN 160
            +   ++  E        AF EAVH+ ++  I ++L   ++  + F    E   +  KA 
Sbjct: 83  LLADAITEHEEAVLTNI-AFMEAVHARSYSSIFSTLCSTVEVDDAFRWSEENSHLQKKAR 141

Query: 161 WALQYTQT 168
             L+  + 
Sbjct: 142 LVLERYEA 149


>gi|330908707|gb|EGH37221.1| ribonucleotide reductase of class 1b (aerobic), beta subunit
           [Escherichia coli AA86]
          Length = 319

 Score = 67.6 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|331684294|ref|ZP_08384886.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H299]
 gi|331077909|gb|EGI49115.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli H299]
          Length = 319

 Score = 67.6 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|218690804|ref|YP_002399016.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           ED1a]
 gi|218428368|emb|CAR09297.2| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           [Escherichia coli ED1a]
          Length = 319

 Score = 67.6 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|91212037|ref|YP_542023.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           UTI89]
 gi|117624912|ref|YP_853853.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           APEC O1]
 gi|218559668|ref|YP_002392581.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           S88]
 gi|237706702|ref|ZP_04537183.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
           3_2_53FAA]
 gi|91073611|gb|ABE08492.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli
           UTI89]
 gi|115514036|gb|ABJ02111.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli
           APEC O1]
 gi|218366437|emb|CAR04189.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           [Escherichia coli S88]
 gi|226899742|gb|EEH86001.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia sp.
           3_2_53FAA]
 gi|294492274|gb|ADE91030.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli IHE3034]
 gi|315284934|gb|EFU44379.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 110-3]
 gi|323951102|gb|EGB46978.1| ribonucleotide reductase [Escherichia coli H252]
 gi|323957111|gb|EGB52836.1| ribonucleotide reductase [Escherichia coli H263]
          Length = 319

 Score = 67.6 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|167856024|ref|ZP_02478769.1| ribonucleotide-diphosphate reductase subunit alpha [Haemophilus
           parasuis 29755]
 gi|219871494|ref|YP_002475869.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
           parasuis SH0165]
 gi|167852863|gb|EDS24132.1| ribonucleotide-diphosphate reductase subunit alpha [Haemophilus
           parasuis 29755]
 gi|219691698|gb|ACL32921.1| ribonucleotide-diphosphate reductase beta subunit [Haemophilus
           parasuis SH0165]
          Length = 325

 Score = 67.6 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 57/138 (41%), Gaps = 7/138 (5%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
             Q+ P +Y    E   +  +++W+ TE     D+  +++   + D ER ++ R +   A
Sbjct: 9   RIQIKPYEYPELLEFKDAIRHSYWLHTEFNFTGDIQDYRT--NINDHERHVLTRAM--LA 64

Query: 91  SSESLVA-NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY 149
            S+  V        +Y +   PE        A  E  H   + +++  LGL++  +F   
Sbjct: 65  ISQVEVNVKRFWGELYHYFPKPEMDDVGGTFAESEVRHKDAYSFLLEKLGLND--MFTQI 122

Query: 150 REVPSITAKANWALQYTQ 167
            E+  +  +  +   + +
Sbjct: 123 TEIEPLMKRIRYMEDFMR 140


>gi|323978713|gb|EGB73795.1| ribonucleotide reductase [Escherichia coli TW10509]
          Length = 319

 Score = 67.6 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|331654159|ref|ZP_08355159.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli M718]
 gi|331047541|gb|EGI19618.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli M718]
          Length = 319

 Score = 67.6 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|307547024|ref|YP_003899503.1| ribonucleotide-diphosphate reductase subunit beta [Halomonas
           elongata DSM 2581]
 gi|307219048|emb|CBV44318.1| ribonucleotide-diphosphate reductase subunit beta [Halomonas
           elongata DSM 2581]
          Length = 324

 Score = 67.6 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 56/143 (39%), Gaps = 5/143 (3%)

Query: 28  RSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLG 87
           R D      L+     E +    +N W+P ++P+ +D+  W   N L D E+ +  R   
Sbjct: 10  RVDAINWNRLQDDKDLEVWNRLTSNFWLPEKIPLSNDVPSW---NTLNDREQQLTIRVFT 66

Query: 88  FFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGEL 145
                +++       A+      P         +F E+VH+ ++  I ++L    D  + 
Sbjct: 67  GLTLLDTIQGTIGAPALIEDAVTPHEEAVFTNISFMESVHARSYSSIFSTLCATRDVDDA 126

Query: 146 FNMYREVPSITAKANWALQYTQT 168
           +    E   +  KA   L+  +T
Sbjct: 127 YRWSEENTHLQNKAELILERYRT 149


>gi|257865182|ref|ZP_05644835.1| ribonucleoside-diphosphate reductase [Enterococcus casseliflavus
           EC30]
 gi|257871507|ref|ZP_05651160.1| ribonucleoside-diphosphate reductase [Enterococcus casseliflavus
           EC10]
 gi|257874804|ref|ZP_05654457.1| ribonucleoside-diphosphate reductase [Enterococcus casseliflavus
           EC20]
 gi|325571550|ref|ZP_08147050.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           casseliflavus ATCC 12755]
 gi|257799116|gb|EEV28168.1| ribonucleoside-diphosphate reductase [Enterococcus casseliflavus
           EC30]
 gi|257805671|gb|EEV34493.1| ribonucleoside-diphosphate reductase [Enterococcus casseliflavus
           EC10]
 gi|257808970|gb|EEV37790.1| ribonucleoside-diphosphate reductase [Enterococcus casseliflavus
           EC20]
 gi|325156026|gb|EGC68222.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           casseliflavus ATCC 12755]
          Length = 321

 Score = 67.6 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 56/133 (42%), Gaps = 8/133 (6%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           + N++  +     WEK        W+ T +P+ +DL  W++   L+  E+  +    G  
Sbjct: 10  NWNEIEDIIDKSTWEKLTEQ---FWLDTRIPLSNDLDDWRT---LSPLEKTTVGYVFGGL 63

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG--ELFN 147
              +++ + + +  + + +  P     L    F E+VH+ ++  I ++L       ++F 
Sbjct: 64  TLLDTVQSESGMDQLRKDVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKAEIADIFE 123

Query: 148 MYREVPSITAKAN 160
                P +  KA 
Sbjct: 124 WTNTNPYLQKKAE 136


>gi|215487997|ref|YP_002330428.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           O127:H6 str. E2348/69]
 gi|215266069|emb|CAS10489.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           [Escherichia coli O127:H6 str. E2348/69]
          Length = 319

 Score = 67.6 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|323966928|gb|EGB62356.1| ribonucleotide reductase [Escherichia coli M863]
 gi|327251394|gb|EGE63080.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli STEC_7v]
          Length = 319

 Score = 67.6 bits (164), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|82492124|gb|ABB77921.1| ribonucleotide reductase beta chain [Environmental halophage 1
           AAJ-2005]
          Length = 358

 Score = 67.6 bits (164), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 65/162 (40%), Gaps = 9/162 (5%)

Query: 19  VDDKRMLNARSDVNQ----LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
            + K   +++SD+      L P +Y    +   +  N++W+  E     D+  ++     
Sbjct: 25  PERKDDTDSQSDIFTARQHLKPYEYTDFLDYVDAVRNSYWVHDEFNFDGDIQDYRVNT-- 82

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           T  E+  IKR +   A  E  V       IY  +   E     +  A  E  H   + ++
Sbjct: 83  TPAEQTTIKRTMLAIAQIEVQVKTFWSD-IYEDMPKAEVGNVGMTFAESEVRHMDAYSHL 141

Query: 135 ITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHY 176
           +  LG+++   F    EVP++  +  +  +Y +  SS +   
Sbjct: 142 LDVLGIEDE--FEQITEVPAVQQRIEYLDEYLEMGSSENKQE 181


>gi|83814991|ref|YP_444284.1| ribonucleoside-diphosphate reductase, beta subunit [Salinibacter
           ruber DSM 13855]
 gi|83756385|gb|ABC44498.1| ribonucleoside-diphosphate reductase, beta subunit [Salinibacter
           ruber DSM 13855]
          Length = 324

 Score = 67.6 bits (164), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 5/132 (3%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           +   L P +Y    E   +   ++W+  E   + D+  ++     TD ER +IK+ +   
Sbjct: 6   ERVNLKPYEYPHLLEFKTAIRQSYWVHDEFSFEGDVQDFR--VNCTDAERSVIKKTMLAI 63

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY 149
           A  E  V       IY  L  PE     +  A  E  H   + +++  LGL++   F   
Sbjct: 64  AQVEVAVKTFWAD-IYDRLPVPEVGAVGMTFAESEVRHLDAYSHLLELLGLNDA--FERI 120

Query: 150 REVPSITAKANW 161
            E+P++  +  +
Sbjct: 121 EEIPALIDRVEY 132


>gi|294505968|ref|YP_003570026.1| Ribonucleoside-diphosphate reductase beta subunit [Salinibacter
           ruber M8]
 gi|294342296|emb|CBH23074.1| Ribonucleoside-diphosphate reductase beta subunit [Salinibacter
           ruber M8]
          Length = 324

 Score = 67.6 bits (164), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 5/132 (3%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           +   L P +Y    E   +   ++W+  E   + D+  ++     TD ER +IK+ +   
Sbjct: 6   ERVNLKPYEYPHLLEFKTAIRQSYWVHDEFSFEGDVQDFR--VNCTDAERSVIKKTMLAI 63

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY 149
           A  E  V       IY  L  PE     +  A  E  H   + +++  LGL++   F   
Sbjct: 64  AQVEVAVKTFWAD-IYDRLPVPEVGAVGMTFAESEVRHLDAYSHLLELLGLNDA--FERI 120

Query: 150 REVPSITAKANW 161
            E+P++  +  +
Sbjct: 121 EEIPALIDRVEY 132


>gi|49475007|ref|YP_033048.1| ribonucleotide-diphosphate reductase subunit beta [Bartonella
           henselae str. Houston-1]
 gi|49237812|emb|CAF27007.1| Ribonucleotide reductase beta-chain [Bartonella henselae str.
           Houston-1]
          Length = 324

 Score = 67.6 bits (164), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 56/127 (44%), Gaps = 7/127 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W S   LT++ER +  R        +++      ++
Sbjct: 26  EVWNRLTGNFWLPEKVPLSNDIPSWAS---LTEEERKLTIRVFTGLTLLDTIQNTVGAIS 82

Query: 104 IY-RHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKAN 160
           +    ++  E        AF EAVH+ ++  I ++L   ++  + F    E   +  KA 
Sbjct: 83  LMADAITEHEEAVLTNI-AFMEAVHARSYSSIFSTLCSTVEVDDAFRWSEENIHLQKKAR 141

Query: 161 WALQYTQ 167
             L+  +
Sbjct: 142 LVLERYE 148


>gi|311278369|ref|YP_003940600.1| Ribonucleoside-diphosphate reductase [Enterobacter cloacae SCF1]
 gi|308747564|gb|ADO47316.1| Ribonucleoside-diphosphate reductase [Enterobacter cloacae SCF1]
          Length = 320

 Score = 67.6 bits (164), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 50/129 (38%), Gaps = 5/129 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P ++P+ +D+  W+S   L+  E+ +  R        
Sbjct: 11  NWNRIEDEKDLEVWNRLTSNFWLPEKIPLSNDIPAWQS---LSHAEQQLTIRVFTGLTLL 67

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++       ++      P     L    F EAVH+ ++  I ++L    D    +    
Sbjct: 68  DTVQNTVGAPSLMPDALTPHEEAVLSNIGFMEAVHARSYSSIFSTLCQSKDVDAAYAWSE 127

Query: 151 EVPSITAKA 159
           E   +  KA
Sbjct: 128 ENAPLQQKA 136


>gi|94990703|ref|YP_598803.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS10270]
 gi|94544211|gb|ABF34259.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS10270]
          Length = 320

 Score = 67.6 bits (164), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 56/132 (42%), Gaps = 8/132 (6%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           + N++  +     WEK        W+ T +P+ +DL  W+    L+  E+ ++ +  G  
Sbjct: 10  NWNEIEDVIDKSTWEKLTEQ---FWLDTRIPLSNDLDDWRK---LSLQEKDLVGKVFGGL 63

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFN 147
              +++ +   V AI   +  P     L    F E+VH+ ++  I ++L   +   E+F 
Sbjct: 64  TLLDTMQSETGVEAIRADVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKKEIEEIFE 123

Query: 148 MYREVPSITAKA 159
                  +  KA
Sbjct: 124 WTNNNEFLQEKA 135


>gi|15675308|ref|NP_269482.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes M1 GAS]
 gi|21910586|ref|NP_664854.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS315]
 gi|28895723|ref|NP_802073.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes SSI-1]
 gi|71910937|ref|YP_282487.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS5005]
 gi|94988801|ref|YP_596902.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS9429]
 gi|94992686|ref|YP_600785.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS2096]
 gi|306826388|ref|ZP_07459706.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes ATCC 10782]
 gi|13622486|gb|AAK34203.1| ribonucleotide diphosphate reductase small subunit [Streptococcus
           pyogenes M1 GAS]
 gi|21904787|gb|AAM79657.1| putative ribonucleoside-diphosphate reductase 2 beta subunit
           [Streptococcus pyogenes MGAS315]
 gi|28810972|dbj|BAC63906.1| putative ribonucleotide diphosphate reductase, small subunit
           [Streptococcus pyogenes SSI-1]
 gi|71853719|gb|AAZ51742.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS5005]
 gi|94542309|gb|ABF32358.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS9429]
 gi|94546194|gb|ABF36241.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS2096]
 gi|304431419|gb|EFM34410.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes ATCC 10782]
          Length = 319

 Score = 67.6 bits (164), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 56/132 (42%), Gaps = 8/132 (6%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           + N++  +     WEK        W+ T +P+ +DL  W+    L+  E+ ++ +  G  
Sbjct: 9   NWNEIEDVIDKSTWEKLTEQ---FWLDTRIPLSNDLDDWRK---LSLQEKDLVGKVFGGL 62

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFN 147
              +++ +   V AI   +  P     L    F E+VH+ ++  I ++L   +   E+F 
Sbjct: 63  TLLDTMQSETGVEAIRADVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKKEIEEIFE 122

Query: 148 MYREVPSITAKA 159
                  +  KA
Sbjct: 123 WTNNNEFLQEKA 134


>gi|312965591|ref|ZP_07779821.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli 2362-75]
 gi|312289740|gb|EFR17630.1| ribonucleoside-diphosphate reductase 2 subunit beta [Escherichia
           coli 2362-75]
          Length = 319

 Score = 67.6 bits (164), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|251792578|ref|YP_003007304.1| ribonucleoside-diphosphate reductase subunit beta [Aggregatibacter
           aphrophilus NJ8700]
 gi|247533971|gb|ACS97217.1| ribonucleoside-diphosphate reductase, beta subunit [Aggregatibacter
           aphrophilus NJ8700]
          Length = 329

 Score = 67.6 bits (164), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 61/162 (37%), Gaps = 14/162 (8%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
             ++ P +Y    E   +  +++W+ TE     D+  +++   ++D ER +I + +   +
Sbjct: 13  RFEIKPYEYPELLEFKDAIRHSYWLHTEFNFTGDIQDFRT--HISDVERAVITKTMLAIS 70

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
             E  V       +Y +   PE           E  H   + +++  LGL   E+F   R
Sbjct: 71  QIEVSV-KRFWGNLYNYFPKPEIEDVGGSFLESEIRHKDAYSFLLEKLGL--NEMFLNVR 127

Query: 151 EVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           +  +I A+  +   + +              +   +   + F
Sbjct: 128 QYKAIMARIEYMEAFMRRKD---------VSQQDFVLSLIMF 160


>gi|19746348|ref|NP_607484.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS8232]
 gi|50914444|ref|YP_060416.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS10394]
 gi|71903783|ref|YP_280586.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS6180]
 gi|94994624|ref|YP_602722.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS10750]
 gi|139473584|ref|YP_001128300.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes str. Manfredo]
 gi|19748543|gb|AAL97983.1| ribonucleotide diphosphate reductase small subunit [Streptococcus
           pyogenes MGAS8232]
 gi|50903518|gb|AAT87233.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS10394]
 gi|71802878|gb|AAX72231.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS6180]
 gi|94548132|gb|ABF38178.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS10750]
 gi|134271831|emb|CAM30066.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus pyogenes str. Manfredo]
          Length = 319

 Score = 67.6 bits (164), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 56/132 (42%), Gaps = 8/132 (6%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           + N++  +     WEK        W+ T +P+ +DL  W+    L+  E+ ++ +  G  
Sbjct: 9   NWNEIEDVIDKSTWEKLTEQ---FWLDTRIPLSNDLDDWRK---LSLQEKDLVGKVFGGL 62

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFN 147
              +++ +   V AI   +  P     L    F E+VH+ ++  I ++L   +   E+F 
Sbjct: 63  TLLDTMQSETGVEAIRADVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKKEIEEIFE 122

Query: 148 MYREVPSITAKA 159
                  +  KA
Sbjct: 123 WTNNNEFLQEKA 134


>gi|218701171|ref|YP_002408800.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           IAI39]
 gi|218371157|emb|CAR18988.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           [Escherichia coli IAI39]
          Length = 319

 Score = 67.6 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLTNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|319954718|ref|YP_004165985.1| ATP-cone domain protein [Cellulophaga algicola DSM 14237]
 gi|319423378|gb|ADV50487.1| ATP-cone domain protein [Cellulophaga algicola DSM 14237]
          Length = 424

 Score = 67.2 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 63/177 (35%), Gaps = 13/177 (7%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           R     KR  N       L P +Y   +E   +  +++W+ +E     D+  +K++  LT
Sbjct: 92  RNEQSQKRKSNIFEKRINLKPYEYPELYEYVPAIRHSYWIHSEFNFTSDIQDFKTR--LT 149

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           D E+  IK  +   +  E  V       IY  +  PE        A  E  H+  + +++
Sbjct: 150 DTEQSAIKNTMLAISQIEVAVKGFWGD-IYHKMPKPEIGSVGATFAESEVRHADAYSHLL 208

Query: 136 TSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             LGL+    F   ++ P+I  +  +           +                L F
Sbjct: 209 EILGLNNE--FKNLKKKPAIMKRVQYL--------ETALKNAKSEDNKDYAESILLF 255


>gi|309786253|ref|ZP_07680881.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella
           dysenteriae 1617]
 gi|308925998|gb|EFP71477.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella
           dysenteriae 1617]
          Length = 301

 Score = 67.2 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 50/125 (40%), Gaps = 5/125 (4%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +    +N W+P +VP+ +D+  W++   LT  E+ +  R        ++L       ++
Sbjct: 1   MWNRLTSNFWLPEKVPLSNDIPAWQT---LTVVEQQLTMRVFTGLTLLDTLQNVIGAPSL 57

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANWA 162
                 P     L   +F E VH+ ++  I ++L    D    +    E   +  KA   
Sbjct: 58  MPDALTPHEEAVLSNISFMEVVHARSYSSIFSTLCQTKDVDAAYAWSEENALLQRKAQII 117

Query: 163 LQYTQ 167
            Q+ +
Sbjct: 118 QQHYR 122


>gi|225021562|ref|ZP_03710754.1| hypothetical protein CORMATOL_01583 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224945553|gb|EEG26762.1| hypothetical protein CORMATOL_01583 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 330

 Score = 67.2 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 49/126 (38%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +DL  W   + L D E+    R        +++      ++
Sbjct: 32  EVWDRLTGNFWLPEKVPVSNDLKSW---STLNDLEKQTTMRVFTGLTLLDTIQGTVGAVS 88

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANW 161
           +            L   AF E+VH+ ++  I  +L    +  E F    E  ++  KA  
Sbjct: 89  MLPDAVTLHEEAVLTNIAFMESVHAKSYSNIFMTLASTKEINEAFRWSEENENLQKKAKI 148

Query: 162 ALQYTQ 167
            L Y  
Sbjct: 149 ILTYYD 154


>gi|300780546|ref|ZP_07090401.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           genitalium ATCC 33030]
 gi|300533532|gb|EFK54592.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           genitalium ATCC 33030]
          Length = 333

 Score = 67.2 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 46/125 (36%), Gaps = 5/125 (4%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P ++P+ +D+  W   N L D E+L   R        +++      ++
Sbjct: 35  EVWDRLTGNFWLPEKIPVSNDIPSW---NTLNDAEQLSTMRVFANLTLLDTIQGTVGAVS 91

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +                AF E+VH+ ++  I  +L       + F    E   +  KA  
Sbjct: 92  LIPDAKTLHEEAVYTNIAFMESVHAKSYSNIYMTLASTPQINDAFRWTEENAEVQRKAKI 151

Query: 162 ALQYT 166
              Y 
Sbjct: 152 IQSYY 156


>gi|251788642|ref|YP_003003363.1| Ribonucleoside-diphosphate reductase [Dickeya zeae Ech1591]
 gi|247537263|gb|ACT05884.1| Ribonucleoside-diphosphate reductase [Dickeya zeae Ech1591]
          Length = 320

 Score = 67.2 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 4/107 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P ++ + +D+  W     LTD ER +  R        ++L       A
Sbjct: 22  EVWNRLTANFWLPEKIALSNDMPSWAQ---LTDAERQLTLRVFTGLTLLDTLQNTQGAPA 78

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
           +      P     L    F EAVH+ ++  I ++L L   E+   Y 
Sbjct: 79  LMADALTPHEEAVLSNIGFMEAVHARSYSAIFSTLCL-TNEVDCAYH 124


>gi|46519447|gb|AAT00095.1| JM118 [Macaca fuscata rhadinovirus]
          Length = 314

 Score = 67.2 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 58/171 (33%), Gaps = 14/171 (8%)

Query: 27  ARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNL 86
              D   L    +            N W P+++ + +D         L+  +R   +   
Sbjct: 12  ESPDRF-LYASDHPGFLALTQETWQNRWFPSQISLHEDSD---EVRLLSPTDREFYQFLF 67

Query: 87  GFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS-LGLDEGEL 145
            F   +ESLV  NI   + +  SN +   Y   Q   E +H   +  I+    G + G+L
Sbjct: 68  TFLGMAESLVNFNI-EDLVKEFSNHDVTHYYAEQVAMENIHGKVYANILNLFFGGNRGDL 126

Query: 146 F---NMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
                   E  ++  K +W     +  +        ++    ++   + F+
Sbjct: 127 MTYAKKIVEDATLAKKIDWLHSRVRKAT-----TRAEKVLLFLVIEGIYFI 172


>gi|240849861|ref|YP_002971249.1| ribonucleotide-diphosphate reductase subunit beta [Bartonella
           grahamii as4aup]
 gi|240266984|gb|ACS50572.1| ribonucleotide-diphosphate reductase subunit beta [Bartonella
           grahamii as4aup]
          Length = 324

 Score = 67.2 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 7/128 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN-NIVL 102
           E +     N W+P +VP+ +D+  W S   LTD+ER +  R        +++      + 
Sbjct: 26  EVWNRLTGNFWLPEKVPLSNDIPSWSS---LTDEERKLTIRVFTGLTLLDTIQNTVGAIS 82

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKAN 160
            +   ++  E        AF EAVH+ ++  I ++L   ++  + F    E   +  KA 
Sbjct: 83  LLADAITEHEEAVLTNI-AFMEAVHARSYSSIFSTLCSTVEVDDAFRWSEENIHLQKKAR 141

Query: 161 WALQYTQT 168
             L+  + 
Sbjct: 142 LVLERYEA 149


>gi|227505793|ref|ZP_03935842.1| ribonucleoside-diphosphate reductase [Corynebacterium striatum ATCC
           6940]
 gi|227197639|gb|EEI77687.1| ribonucleoside-diphosphate reductase [Corynebacterium striatum ATCC
           6940]
          Length = 318

 Score = 67.2 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 58/158 (36%), Gaps = 9/158 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P ++P+ +DL  W     +  +E+    R      + ++L      ++
Sbjct: 20  EIWDRLTGNFWLPEKIPVSNDLPKW---GLMNAEEQWATMRVFAGLTALDTLQGAVGAIS 76

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +      P     L   AF EAVH+ ++  I  +L         F    E  ++  K+  
Sbjct: 77  LMPDAVTPHEEAVLCNIAFMEAVHAKSYSNIFMTLSSTPEINRAFRWAEESETLRYKSTR 136

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRILTRS----LRFLCR 195
             ++ +  +S      +    S +        LRF  R
Sbjct: 137 VREFYEGDNSLMRKAASTLLESFLFYSGFYLPLRFASR 174


>gi|82778048|ref|YP_404397.1| ribonucleotide-diphosphate reductase subunit beta [Shigella
           dysenteriae Sd197]
 gi|81242196|gb|ABB62906.1| ribonucleoside-diphosphate reductase 2, beta chain [Shigella
           dysenteriae Sd197]
          Length = 322

 Score = 67.2 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 52/137 (37%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   LT  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LTVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F E VH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEVVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENALLQRKAQIIQQHYR 143


>gi|228473186|ref|ZP_04057941.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga
           gingivalis ATCC 33624]
 gi|228275336|gb|EEK14128.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga
           gingivalis ATCC 33624]
          Length = 319

 Score = 67.2 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 46/135 (34%), Gaps = 5/135 (3%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
                P +Y    +         W+ +EV    D+  +KS   L+  E+  +KR L   A
Sbjct: 7   RENYKPFEYPEVMKFVDMMHQTFWVHSEVEFTADIQDFKS--NLSLVEKEAVKRALLGIA 64

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
             E  V       +Y     PE        A  E  HS  +  ++  LG +    F    
Sbjct: 65  QVEVAVKTFWGD-LYDVFPKPEFNGLGATFAECEFRHSEAYSRLLEVLGYNNE--FEALL 121

Query: 151 EVPSITAKANWALQY 165
           EVP    +     +Y
Sbjct: 122 EVPIFKERNTILKEY 136


>gi|305681191|ref|ZP_07403998.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           matruchotii ATCC 14266]
 gi|305659396|gb|EFM48896.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           matruchotii ATCC 14266]
          Length = 330

 Score = 67.2 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 49/126 (38%), Gaps = 5/126 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +DL  W + N L   E+    R        +++      ++
Sbjct: 32  EVWDRLTGNFWLPEKVPVSNDLKSWSTLNEL---EKQTTMRVFTGLTLLDTIQGTVGAVS 88

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANW 161
           +            L   AF E+VH+ ++  I  +L    +  E F    E  ++  KA  
Sbjct: 89  MLPDAVTLHEEAVLTNIAFMESVHAKSYSNIFMTLASTKEINEAFRWSEENENLQKKAKI 148

Query: 162 ALQYTQ 167
            L Y  
Sbjct: 149 ILTYYD 154


>gi|25027435|ref|NP_737489.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           efficiens YS-314]
 gi|259506419|ref|ZP_05749321.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
           [Corynebacterium efficiens YS-314]
 gi|23492716|dbj|BAC17689.1| putative ribonucleotide reductase [Corynebacterium efficiens
           YS-314]
 gi|259165992|gb|EEW50546.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
           [Corynebacterium efficiens YS-314]
          Length = 339

 Score = 67.2 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 56/145 (38%), Gaps = 5/145 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           + +     N W+P ++P+ +D+  W   N +++ E L   R        +++      ++
Sbjct: 40  DIWNRLTTNFWLPEKIPVSNDIQKW---NSMSEAEHLATLRVFTGLTLLDTIQGTVGAVS 96

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
           +    +       L   +F E+VH+ ++  I  +L       E F   R    +  KA  
Sbjct: 97  MIPDATTHHEEAVLTNISFMESVHAKSYSNIFMTLASTPEINEAFRWSRHNEHLQYKAKR 156

Query: 162 ALQYTQTLSSPSFHYWNKRRRSRIL 186
            L Y Q  S+P+           +L
Sbjct: 157 ILDYYQQDSTPARKKIASVMLESLL 181


>gi|328958552|ref|YP_004375938.1| ribonucleoside-diphosphate reductase subunit beta [Carnobacterium
           sp. 17-4]
 gi|328674876|gb|AEB30922.1| ribonucleoside-diphosphate reductase subunit beta [Carnobacterium
           sp. 17-4]
          Length = 318

 Score = 67.2 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 62/138 (44%), Gaps = 5/138 (3%)

Query: 25  LNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR 84
           + ++  V     ++       +  A +  W+ T VP+ +DLA W+    L+  E+ +IK+
Sbjct: 1   MTSKHQVINWNKIEDELDDYVWDKATSQFWLDTRVPISNDLADWRE---LSSVEQEVIKK 57

Query: 85  NLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDE 142
            +G  A  ++L +   V A+   +   +    L    F E++H+ ++  I+TSL      
Sbjct: 58  VVGGLALLDTLQSEKGVNAMREDVRTHKEAAILNNFLFMESIHAKSYGTILTSLNSIKSI 117

Query: 143 GELFNMYREVPSITAKAN 160
            E+++       +  KA 
Sbjct: 118 NEIYDWMNNDERMQYKAK 135


>gi|51247866|pdb|1UZR|A Chain A, Crystal Structure Of The Class Ib Ribonucleotide Reductase
           R2f-2 Subunit From Mycobacterium Tuberculosis
 gi|51247867|pdb|1UZR|B Chain B, Crystal Structure Of The Class Ib Ribonucleotide Reductase
           R2f-2 Subunit From Mycobacterium Tuberculosis
 gi|51247868|pdb|1UZR|C Chain C, Crystal Structure Of The Class Ib Ribonucleotide Reductase
           R2f-2 Subunit From Mycobacterium Tuberculosis
          Length = 296

 Score = 67.2 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 52/124 (41%), Gaps = 7/124 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W     LT  E+ +  R        +++      ++
Sbjct: 26  EVWDRLTGNFWLPEKVPVSNDIPSW---GTLTAGEKQLTMRVFTGLTMLDTIQGTVGAVS 82

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY---REVPSITAKAN 160
           +      P     L   AF E+VH+ ++  I ++L     E+ + +    E  ++  KA 
Sbjct: 83  LIPDALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCS-TAEIDDAFRWSEENRNLQRKAE 141

Query: 161 WALQ 164
             LQ
Sbjct: 142 IVLQ 145


>gi|77410697|ref|ZP_00787056.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae CJB111]
 gi|77163233|gb|EAO74185.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae CJB111]
          Length = 319

 Score = 67.2 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 55/132 (41%), Gaps = 8/132 (6%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           + N++  +     WEK        W+ T +P+ +DL  W+    L+  E+ ++ +  G  
Sbjct: 9   NWNEIEDVIDKSTWEKLTEQ---FWLDTRIPLSNDLDDWRK---LSAQEKDLVGKVFGGL 62

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFN 147
              +++ +   + AI   +  P     L    F E+VH+ ++  I ++L       E+F 
Sbjct: 63  TLLDTMQSETGIEAIRADVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKSEIEEIFE 122

Query: 148 MYREVPSITAKA 159
                  +  KA
Sbjct: 123 WTNNNEFLQEKA 134


>gi|256820037|ref|YP_003141316.1| ribonucleotide reductase [Capnocytophaga ochracea DSM 7271]
 gi|315225453|ref|ZP_07867266.1| ribonucleoside-diphosphate reductase [Capnocytophaga ochracea
           F0287]
 gi|256581620|gb|ACU92755.1| ribonucleotide reductase [Capnocytophaga ochracea DSM 7271]
 gi|314944551|gb|EFS96587.1| ribonucleoside-diphosphate reductase [Capnocytophaga ochracea
           F0287]
          Length = 319

 Score = 67.2 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/135 (24%), Positives = 50/135 (37%), Gaps = 5/135 (3%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
                P +Y    E   +   + W+ +EV    D+  +KS   LT  E+  +KR L   A
Sbjct: 7   RENYKPFEYPEVMEFVNAMHKSFWVHSEVEFTADIQDFKS--ELTPVEKEAVKRALLGIA 64

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
             E  V       +Y     PE        A  E  HS  +  ++  LG +    F    
Sbjct: 65  QVEVSVKTFWGD-LYDLFPKPEFNGLGATFAECEFRHSEAYARLLEVLGYNNE--FENLL 121

Query: 151 EVPSITAKANWALQY 165
           EVP    ++N   +Y
Sbjct: 122 EVPVFKERSNVLKEY 136


>gi|222102712|ref|YP_002539751.1| ribonucleoside-diphosphate reductase 2 beta chain [Agrobacterium
           vitis S4]
 gi|221739313|gb|ACM40046.1| ribonucleoside-diphosphate reductase 2 beta chain [Agrobacterium
           vitis S4]
          Length = 329

 Score = 66.8 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 5/127 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W     L  +E+ +  R        +++  +     
Sbjct: 31  EVWNRLTGNFWLPEKVPLSNDIPSWA---ALKPEEQQLTIRVFTGLTLLDTIQTSIGAPT 87

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKANW 161
           +      P         +F EAVH+ ++  I ++L    D  + +    E   +  K+  
Sbjct: 88  LMEDSITPHEEAVYSNISFMEAVHARSYSSIFSTLCSTSDVDDAYRWSEENEFLQKKSAL 147

Query: 162 ALQYTQT 168
            L++ + 
Sbjct: 148 ILEHYRN 154


>gi|319891738|ref|YP_004148613.1| Ribonucleotide reductase of class Ib (aerobic), beta subunit
           [Staphylococcus pseudintermedius HKU10-03]
 gi|317161434|gb|ADV04977.1| Ribonucleotide reductase of class Ib (aerobic), beta subunit
           [Staphylococcus pseudintermedius HKU10-03]
 gi|323465093|gb|ADX77246.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           pseudintermedius ED99]
          Length = 320

 Score = 66.8 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 57/139 (41%), Gaps = 16/139 (11%)

Query: 25  LNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR 84
            N + D+  +           +       W+ TE  +  D+A WKS   LT+ E+   K+
Sbjct: 6   WNTQEDMTNMF----------WRQNIAQMWVETEFKVSKDIASWKS---LTEAEQDTFKK 52

Query: 85  NLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDE 142
            L      ++  A++ +  I  H  +   +         E +H+ ++ +I T+L    + 
Sbjct: 53  ALAGLTGLDTHQADDGMPLIMLHTQDLRKKAVYSFMGMMEQIHAKSYSHIFTTLLPSKET 112

Query: 143 GELFNMY-REVPSITAKAN 160
            EL +++  E P +  K+ 
Sbjct: 113 DELLDVWVLEEPHLKYKSE 131


>gi|320194816|gb|EFW69445.1| ribonucleotide-diphosphate reductase subunit beta [Escherichia coli
           WV_060327]
          Length = 319

 Score = 66.8 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 55/156 (35%), Gaps = 6/156 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLLPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRIL 186
           E   +  KA    Q+ +    P             L
Sbjct: 127 ENAPLQRKAQIIQQHYRG-DDPLKKKITSVFLESFL 161


>gi|293412034|ref|ZP_06654757.1| ribonucleoside-diphosphate reductase [Escherichia coli B354]
 gi|291468805|gb|EFF11296.1| ribonucleoside-diphosphate reductase [Escherichia coli B354]
          Length = 319

 Score = 66.8 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLLPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|312864696|ref|ZP_07724927.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           downei F0415]
 gi|311099823|gb|EFQ58036.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           downei F0415]
          Length = 319

 Score = 66.8 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 58/134 (43%), Gaps = 10/134 (7%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           + N++  +     WEK        W+ T +P+ +DL  W+    L++ E+ ++ +  G  
Sbjct: 9   NWNEIEDVIDKSTWEKLTEQ---FWLDTRIPLSNDLDDWRK---LSEAEKDLVGKVFGGL 62

Query: 90  ASSESLVANNIVLAIYRHL-SNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELF 146
              +++ +   V AI   + +  E       Q F E+VH+ ++  I ++L       E+F
Sbjct: 63  TLLDTMQSQTGVEAIRGDIRTQHEEAVLNNIQ-FMESVHAKSYSSIFSTLNTKSEIEEIF 121

Query: 147 NMYREVPSITAKAN 160
           +       +  KA 
Sbjct: 122 DWTNNNEYLQKKAE 135


>gi|331658787|ref|ZP_08359729.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA206]
 gi|315298701|gb|EFU57955.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 16-3]
 gi|331053369|gb|EGI25398.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli TA206]
          Length = 319

 Score = 66.8 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLLPDTLTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|115754707|ref|XP_001199509.1| PREDICTED: similar to putative ribonucleotide reductase small
           subunit, partial [Strongylocentrotus purpuratus]
          Length = 44

 Score = 66.8 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 16/41 (39%)

Query: 101 VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           V    + +   E R +   Q   E +HS  +  +I +   D
Sbjct: 1   VERFSQEVQVAEARCFYGFQIAIENIHSEMYSLLIDTYIKD 41


>gi|38638230|ref|NP_944413.1| ribonucleotide reductase subunit 2 [Psittacid herpesvirus 1]
 gi|81987371|sp|Q6UDJ1|RIR2_PSHV1 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|34500236|gb|AAQ73719.1| unknown [Psittacid herpesvirus 1]
          Length = 313

 Score = 66.8 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 48/131 (36%), Gaps = 12/131 (9%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
               E    +  N+W   E+    D       + LT+DE    K    F A+++ LV  N
Sbjct: 18  PDMRELRDLSIANNWNEFELCYARDEKD---VDCLTEDECDFYKFVFCFLAAADDLVNVN 74

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI------ITSLGLDEGELFNMYREVP 153
           +   +       + + Y   Q   E VHS T+  +        ++  D   +    ++  
Sbjct: 75  L-DNLVTLFPQKDIQHYYAEQIRIETVHSRTYSAVQLVFFRNDAIARDRY-VLEAVKD-G 131

Query: 154 SITAKANWALQ 164
           +I  K +W  +
Sbjct: 132 AIRRKIDWLSR 142


>gi|81428551|ref|YP_395551.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           sakei subsp. sakei 23K]
 gi|78610193|emb|CAI55242.1| Ribonucleoside-diphosphate reductase, beta chain [Lactobacillus
           sakei subsp. sakei 23K]
          Length = 318

 Score = 66.8 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+S   L D+E+ ++    G     ++L + + + 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRS---LPDNEKWIVGHVFGGLTLLDTLQSQDGMA 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           ++  ++  P     L    F E+VH+ ++  I ++L       E+F+       +  KAN
Sbjct: 76  SLKANIRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTPNEIDEIFDWTNTNEYLQYKAN 135


>gi|306833073|ref|ZP_07466204.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           bovis ATCC 700338]
 gi|304424782|gb|EFM27917.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           bovis ATCC 700338]
          Length = 320

 Score = 66.8 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 56/133 (42%), Gaps = 8/133 (6%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           + N++  +     WEK        W+ T +P+ +DL  W+    L+ +E+ ++ +  G  
Sbjct: 10  NWNEIEDIIDKSTWEKLTEQ---FWLDTRIPLSNDLDDWRK---LSAEEKDLVGKVFGGL 63

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFN 147
              +++ + + V AI   +  P     L    F E+VH+ ++  I ++L        +F 
Sbjct: 64  TLLDTMQSESGVEAIRADVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKSEIEAIFE 123

Query: 148 MYREVPSITAKAN 160
                  +  KA 
Sbjct: 124 WTNSNDYLQKKAK 136


>gi|288904913|ref|YP_003430135.1| ribonucleoside-diphosphate reductase (minor subunit) [Streptococcus
           gallolyticus UCN34]
 gi|306830970|ref|ZP_07464132.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
 gi|288731639|emb|CBI13196.1| ribonucleoside-diphosphate reductase (minor subunit) [Streptococcus
           gallolyticus UCN34]
 gi|304426993|gb|EFM30103.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           gallolyticus subsp. gallolyticus TX20005]
          Length = 320

 Score = 66.8 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 56/133 (42%), Gaps = 8/133 (6%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           + N++  +     WEK        W+ T +P+ +DL  W+    L+ +E+ ++ +  G  
Sbjct: 10  NWNEIEDIIDKSTWEKLTEQ---FWLDTRIPLSNDLDDWRK---LSAEEKDLVGKVFGGL 63

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFN 147
              +++ + + V AI   +  P     L    F E+VH+ ++  I ++L        +F 
Sbjct: 64  TLLDTMQSESGVEAIRADVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKSEIEAIFE 123

Query: 148 MYREVPSITAKAN 160
                  +  KA 
Sbjct: 124 WTNSNDYLQKKAK 136


>gi|284922618|emb|CBG35706.1| ribonucleoside-diphosphate reductase 2 beta chain [Escherichia coli
           042]
          Length = 319

 Score = 66.8 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSVVEQKLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLLPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|324005772|gb|EGB74991.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 57-2]
          Length = 319

 Score = 66.8 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLLPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|70607897|ref|YP_256767.1| ribonucleotide-diphosphate reductase subunit beta [Sulfolobus
           acidocaldarius DSM 639]
 gi|68568545|gb|AAY81474.1| ribonucleoside-diphosphate reductase [Sulfolobus acidocaldarius DSM
           639]
          Length = 314

 Score = 66.8 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/136 (26%), Positives = 54/136 (39%), Gaps = 19/136 (13%)

Query: 39  YGWA---WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
           Y W     + Y       W P ++    D   WK    L+ DE+  +   +  F + E  
Sbjct: 25  YDWNTFPMKLYQIGKRLFWDPAKIDFSKDKEDWKK---LSKDEKNYLLNIVSLFMAGEEA 81

Query: 96  VANNIVLAIYRHLSN--PECRQYLLRQAFEEAVHSHTFQYIITSL-GLDEGELFN----- 147
           VA +I   I   ++    E   YL + AFEEA H+  F+    SL   D+  +F      
Sbjct: 82  VAVDITPLISTMINEGRVEDVIYLEQFAFEEAKHAEAFRRFCDSLEINDDLTIFTTEYNP 141

Query: 148 -----MYREVPSITAK 158
                 Y E+PS+  K
Sbjct: 142 WYQKIFYEELPSVMWK 157


>gi|283835589|ref|ZP_06355330.1| ribonucleoside-diphosphate reductase, beta subunit [Citrobacter
           youngae ATCC 29220]
 gi|291068801|gb|EFE06910.1| ribonucleoside-diphosphate reductase, beta subunit [Citrobacter
           youngae ATCC 29220]
          Length = 319

 Score = 66.4 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 58/149 (38%), Gaps = 5/149 (3%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
           M  +R        ++     E +    +N W+P +VP+ +D+  W++   L+  E+ +  
Sbjct: 1   MTLSRVSAINWNRIEDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSAAEQQLTI 57

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLD 141
           R        +++       A+      P     L   +F EAVH+ ++  I ++L    D
Sbjct: 58  RVFTGLTLLDTIQNIVGAPALMADSITPHEEAVLSNISFMEAVHARSYSSIFSTLCQTTD 117

Query: 142 EGELFNMYREVPSITAKANWALQYTQTLS 170
               +    E   +  KA   L +  + +
Sbjct: 118 VDAAYAWSEENNPLQRKAQIILAHYASDN 146


>gi|60416882|emb|CAD71202.1| ribonucleoside-diphosphate reductase small subunit [Bacillus
           subtilis]
          Length = 140

 Score = 66.4 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 44/117 (37%), Gaps = 6/117 (5%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            Y       W+P E+ +  DL  WK    L  +E+    + L      ++   N  +  I
Sbjct: 26  FYNQNVKQFWLPEEIALNGDLLTWK---YLGKNEQDTYMKVLAGLTLLDTEQGNTGMPII 82

Query: 105 YRHLSNPECRQYLLRQAFEEA-VHSHTFQYIITSLGLDE--GELFNMYREVPSITAK 158
             H+   + +  L   A  E  VH+ ++  I  +L   E   E+F   +    +  K
Sbjct: 83  AEHVDGHQRKAVLNFMAMMENAVHAKSYSNIFLTLAPTEQINEVFEWVKNNRFLQKK 139


>gi|300941043|ref|ZP_07155562.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 21-1]
 gi|300454207|gb|EFK17700.1| ribonucleoside-diphosphate reductase, beta subunit [Escherichia
           coli MS 21-1]
          Length = 319

 Score = 66.4 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLLPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|10834911|ref|NP_066872.1| ribonucleotide reductase subunit 2 [Gallid herpesvirus 3]
 gi|5102912|dbj|BAA78729.1| UL40 protein [Marek's disease virus serotype 2 MDV2]
 gi|5689312|dbj|BAA82936.1| UL40 product homolog [Marek's disease virus serotype 2 MDV2]
 gi|10800005|dbj|BAB16550.1| UL40 protein [Gallid herpesvirus 3]
          Length = 353

 Score = 66.4 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 53/159 (33%), Gaps = 13/159 (8%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                    +  N W  TE  + +DL        L+++E+   +    F ++++ LV  N
Sbjct: 61  PDIGHLRALSIMNRWTETEFVVAEDLGD---VAKLSEEEKNFYRFLFTFLSAADDLVNLN 117

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ----YIITSLGLDEGELFNMYREVPSI 155
           I   +       +   Y   Q   EAVHS  +      +  +      +      E P I
Sbjct: 118 I-DNLLGLFEQKDIHHYYFEQECIEAVHSRAYSIIQLMLFDNDSSARAKYVQSALESPVI 176

Query: 156 TAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
            +K  W  +     +S    Y        ILT  + F  
Sbjct: 177 QSKLEWLDRRILECTSIPEKY-----ILMILTEGIFFSA 210


>gi|297243045|ref|ZP_06926983.1| ribonucleotide reductase, beta subunit [Gardnerella vaginalis AMD]
 gi|296889256|gb|EFH27990.1| ribonucleotide reductase, beta subunit [Gardnerella vaginalis AMD]
          Length = 364

 Score = 66.4 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 49/125 (39%), Gaps = 4/125 (3%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
            +R        +      + +     N W+P +VP+ +D+  W+S   LTD ER    R 
Sbjct: 48  GSRVRPVNWNNIVDDKDLDVWNRLIANFWLPEKVPLSNDIPSWRS---LTDLERKTTTRV 104

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL 145
                  ++  A    L    H      +      AF +++H+ ++  I ++L   E E+
Sbjct: 105 FTGLTLLDTSQATIGELCQIEHARTEHEQAIYTNIAFMQSIHARSYSSIFSTLCSSE-EI 163

Query: 146 FNMYR 150
              YR
Sbjct: 164 DEAYR 168


>gi|18653874|ref|NP_570808.1| small ribonucleotide reductase [Macacine herpesvirus 5]
 gi|4494972|gb|AAD21394.1| small ribonucleotide reductase [Macaca mulatta rhadinovirus 17577]
          Length = 314

 Score = 66.4 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 58/171 (33%), Gaps = 14/171 (8%)

Query: 27  ARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNL 86
              D   L    +            N W P+++ + +D         L+  +R   +   
Sbjct: 12  ESPDRF-LYASDHPGFLALTQETWQNRWFPSQISLHEDSD---EVRLLSPTDREFYQFLF 67

Query: 87  GFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS-LGLDEGEL 145
            F   +ESLV  NI   + +  SN +   Y   Q   E +H   +  I+    G + G+L
Sbjct: 68  TFLGMAESLVNFNI-EDLVKEFSNHDVTHYYAEQVAMENIHGKVYANILNLFFGGNRGDL 126

Query: 146 F---NMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
                   E  ++  K +W     +  +        ++    ++   + F+
Sbjct: 127 MIYAKKIVEDATLAKKIDWLHSRVRKAT-----TRAEKVLLFLVIEGIYFI 172


>gi|283782686|ref|YP_003373440.1| ribonucleoside-diphosphate reductase, beta subunit [Gardnerella
           vaginalis 409-05]
 gi|283441437|gb|ADB13903.1| ribonucleoside-diphosphate reductase, beta subunit [Gardnerella
           vaginalis 409-05]
          Length = 359

 Score = 66.4 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 49/125 (39%), Gaps = 4/125 (3%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
            +R        +      + +     N W+P +VP+ +D+  W+S   LTD ER    R 
Sbjct: 43  GSRVRPVNWNNIVDDKDLDVWNRLIANFWLPEKVPLSNDIPSWRS---LTDLERKTTTRV 99

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL 145
                  ++  A    L    H      +      AF +++H+ ++  I ++L   E E+
Sbjct: 100 FTGLTLLDTSQATIGELCQIEHARTEHEQAIYTNIAFMQSIHARSYSSIFSTLCSSE-EI 158

Query: 146 FNMYR 150
              YR
Sbjct: 159 DEAYR 163


>gi|297622357|ref|YP_003703791.1| ribonucleotide reductase [Truepera radiovictrix DSM 17093]
 gi|297163537|gb|ADI13248.1| ribonucleotide reductase [Truepera radiovictrix DSM 17093]
          Length = 324

 Score = 66.4 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 53/130 (40%), Gaps = 5/130 (3%)

Query: 29  SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
              + L P +Y        +  +++W+ TE  + +D+  ++   G+ + ER ++ R L  
Sbjct: 4   ERRSTLRPAEYPEFLAYRDAIRHSYWLHTEYNLTEDVNDYR--VGVREAERQVLTRALLA 61

Query: 89  FASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNM 148
            A  E  V       +YR    PE        A  E  H   + +++  LGL   + F  
Sbjct: 62  IAQVEVAVKTFWGD-LYRKFPKPEVGAVGYTFAESEVRHQDAYAHLLELLGL--TDAFAR 118

Query: 149 YREVPSITAK 158
             E P++  +
Sbjct: 119 LHEAPALGER 128


>gi|308235083|ref|ZP_07665820.1| ribonucleoside-diphosphate reductase, beta subunit [Gardnerella
           vaginalis ATCC 14018]
 gi|311115217|ref|YP_003986438.1| ribonucleotide-diphosphate reductase subunit beta [Gardnerella
           vaginalis ATCC 14019]
 gi|310946711|gb|ADP39415.1| ribonucleotide-diphosphate reductase subunit beta [Gardnerella
           vaginalis ATCC 14019]
          Length = 364

 Score = 66.4 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 49/125 (39%), Gaps = 4/125 (3%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
            +R        +      + +     N W+P +VP+ +D+  W+S   LTD ER    R 
Sbjct: 48  GSRVRPVNWNNIVDDKDLDVWNRLIANFWLPEKVPLSNDIPSWRS---LTDLERKTTTRV 104

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL 145
                  ++  A    L    H      +      AF +++H+ ++  I ++L   E E+
Sbjct: 105 FTGLTLLDTSQATIGELCQIEHARTEHEQAIYTNIAFMQSIHARSYSSIFSTLCSSE-EI 163

Query: 146 FNMYR 150
              YR
Sbjct: 164 DEAYR 168


>gi|146318863|ref|YP_001198575.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           suis 05ZYH33]
 gi|146321071|ref|YP_001200782.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           suis 98HAH33]
 gi|223932819|ref|ZP_03624816.1| Ribonucleoside-diphosphate reductase [Streptococcus suis 89/1591]
 gi|253751944|ref|YP_003025085.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus suis SC84]
 gi|253753767|ref|YP_003026908.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus suis
           P1/7]
 gi|253755355|ref|YP_003028495.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus suis
           BM407]
 gi|330833008|ref|YP_004401833.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           suis ST3]
 gi|145689669|gb|ABP90175.1| Ribonucleotide reductase, beta subunit [Streptococcus suis 05ZYH33]
 gi|145691877|gb|ABP92382.1| Ribonucleotide reductase, beta subunit [Streptococcus suis 98HAH33]
 gi|223898528|gb|EEF64892.1| Ribonucleoside-diphosphate reductase [Streptococcus suis 89/1591]
 gi|251816233|emb|CAZ51860.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus suis SC84]
 gi|251817819|emb|CAZ55572.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus suis BM407]
 gi|251820013|emb|CAR46187.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus suis P1/7]
 gi|292558520|gb|ADE31521.1| ribonucleotide-diphosphate reductase beta subunit [Streptococcus
           suis GZ1]
 gi|319758306|gb|ADV70248.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           suis JS14]
 gi|329307231|gb|AEB81647.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           suis ST3]
          Length = 319

 Score = 66.4 bits (161), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 53/128 (41%), Gaps = 8/128 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    LT +E+ ++ +  G     ++L +   V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LTAEEKDLVGKVFGGLTLLDTLQSETGVQ 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           A+   +  P          F E+VH+ ++  I ++L       ++F        +  KA 
Sbjct: 76  ALRNDIRTPHEEAVYNNIQFMESVHAKSYSSIFSTLNTKSEIEDIFEWTNSNEYLQRKAK 135

Query: 161 WALQYTQT 168
              +  +T
Sbjct: 136 IINEIYET 143


>gi|302023955|ref|ZP_07249166.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           suis 05HAS68]
          Length = 320

 Score = 66.0 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 53/128 (41%), Gaps = 8/128 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    LT +E+ ++ +  G     ++L +   V 
Sbjct: 23  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LTAEEKDLVGKVFGGLTLLDTLQSETGVQ 76

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           A+   +  P          F E+VH+ ++  I ++L       ++F        +  KA 
Sbjct: 77  ALRNDIRTPHEEAVYNNIQFMESVHAKSYSSIFSTLNTKSEIEDIFEWTNSNEYLQRKAK 136

Query: 161 WALQYTQT 168
              +  +T
Sbjct: 137 IINEIYET 144


>gi|145296522|ref|YP_001139343.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           glutamicum R]
 gi|140846442|dbj|BAF55441.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 334

 Score = 66.0 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 51/127 (40%), Gaps = 7/127 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W     L D E+    R        +++      ++
Sbjct: 36  EVWDRLTGNFWLPEKVPVSNDIKSW---GTLNDVEKAATMRVFTGLTLLDTIQGTVGAIS 92

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY---REVPSITAKAN 160
           +     +      L   AF E+VH+ ++  I  +L     E+ + +    E  ++  KA 
Sbjct: 93  LLPDADSLHEEAVLTNIAFMESVHAKSYSNIFMTLAS-TAEINDAFRWSEENENLQRKAK 151

Query: 161 WALQYTQ 167
             L Y +
Sbjct: 152 IILSYYE 158


>gi|298253146|ref|ZP_06976938.1| ribonucleotide reductase, beta subunit [Gardnerella vaginalis 5-1]
 gi|297532541|gb|EFH71427.1| ribonucleotide reductase, beta subunit [Gardnerella vaginalis 5-1]
          Length = 331

 Score = 66.0 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 49/125 (39%), Gaps = 4/125 (3%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
            +R        +      + +     N W+P +VP+ +D+  W+S   LTD ER    R 
Sbjct: 15  GSRVRPVNWNNIVDDKDLDVWNRLIANFWLPEKVPLSNDIPSWRS---LTDLERKTTTRV 71

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL 145
                  ++  A    L    H      +      AF +++H+ ++  I ++L   E E+
Sbjct: 72  FTGLTLLDTSQATIGELCQIEHARTEHEQAIYTNIAFMQSIHARSYSSIFSTLCSSE-EI 130

Query: 146 FNMYR 150
              YR
Sbjct: 131 DEAYR 135


>gi|7330057|gb|AAF60046.1|AF210726_67 small ribonuclease reductase [Rhesus monkey rhadinovirus H26-95]
          Length = 304

 Score = 66.0 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 58/171 (33%), Gaps = 14/171 (8%)

Query: 27  ARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNL 86
              D   L    +            N W P+++ + +D         L+  +R   +   
Sbjct: 2   ESPDRF-LYASDHPGFLALTQETWQNRWFPSQISLHEDSD---EVRLLSPTDREFYQFLF 57

Query: 87  GFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS-LGLDEGEL 145
            F   +ESLV  NI   + +  SN +   Y   Q   E +H   +  I+    G + G+L
Sbjct: 58  TFLGMAESLVNFNI-EDLVKEFSNHDVTHYYAEQVAMENIHGKVYANILNLFFGGNRGDL 116

Query: 146 F---NMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
                   E  ++  K +W     +  +        ++    ++   + F+
Sbjct: 117 MIYAKKIVEDATLAKKIDWLHSRVRKAT-----TRAEKVLLFLVIEGIYFI 162


>gi|171779436|ref|ZP_02920400.1| hypothetical protein STRINF_01281 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282053|gb|EDT47484.1| hypothetical protein STRINF_01281 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 316

 Score = 66.0 bits (160), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 5/116 (4%)

Query: 46  YLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIY 105
           +  A    W+ T VP+ +DL  W+    L+D E+ ++K+ +G  A  ++L +   + A+ 
Sbjct: 20  WDKATAQFWLDTRVPVSNDLLDWRK---LSDMEKEVVKKAVGGLALLDTLQSEEGLYALK 76

Query: 106 RHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKA 159
           ++    + R  L    F E++H+ T+  I+ SL    D  E++N       +  KA
Sbjct: 77  KNARTLKERAVLSDFTFMESIHAKTYGTILISLNTFKDIEEIYNWMNNDRRMQFKA 132


>gi|329296713|ref|ZP_08254049.1| ribonucleoside-diphosphate reductase [Plautia stali symbiont]
          Length = 319

 Score = 66.0 bits (160), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 54/138 (39%), Gaps = 5/138 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    NN W+P +VP+ +DL  W+S   L   ++ +  R        
Sbjct: 10  NWNRIQDEKDLEVWNRLTNNFWLPEKVPLSNDLPAWQS---LAPQQQQLTIRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++        +      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTIQNVIGAPGLMEDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCNTADVDAAYLWSE 126

Query: 151 EVPSITAKANWALQYTQT 168
           E  ++  KA   L++ + 
Sbjct: 127 ENAALQNKAKIVLEHYRA 144


>gi|227510692|ref|ZP_03940741.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           brevis subsp. gravesensis ATCC 27305]
 gi|227513708|ref|ZP_03943757.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           buchneri ATCC 11577]
 gi|227522501|ref|ZP_03952550.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           hilgardii ATCC 8290]
 gi|227083027|gb|EEI18339.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           buchneri ATCC 11577]
 gi|227090323|gb|EEI25635.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           hilgardii ATCC 8290]
 gi|227189813|gb|EEI69880.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           brevis subsp. gravesensis ATCC 27305]
          Length = 318

 Score = 66.0 bits (160), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 53/119 (44%), Gaps = 8/119 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL+ W++   L  D + ++    G     ++L +   + 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLSDWRT---LDQDHQWVVGHVFGGLTLLDTLQSQEGMA 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKA 159
           ++ + +  P     L    F E+VH+ ++  I ++L   E   E+F+       +  KA
Sbjct: 76  SLRKDVQTPHETAVLNNIQFMESVHAKSYSSIFSTLNTPEQIDEIFDWSDTEEFLQNKA 134


>gi|270291189|ref|ZP_06197412.1| ribonucleoside-diphosphate reductase, beta subunit [Pediococcus
           acidilactici 7_4]
 gi|304385474|ref|ZP_07367819.1| ribonucleotide-diphosphate reductase subunit beta [Pediococcus
           acidilactici DSM 20284]
 gi|270280585|gb|EFA26420.1| ribonucleoside-diphosphate reductase, beta subunit [Pediococcus
           acidilactici 7_4]
 gi|304328681|gb|EFL95902.1| ribonucleotide-diphosphate reductase subunit beta [Pediococcus
           acidilactici DSM 20284]
          Length = 317

 Score = 66.0 bits (160), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 56/152 (36%), Gaps = 8/152 (5%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL+ W+    L +D + ++    G     ++L + + + 
Sbjct: 21  WEKLTEQ---FWLDTRIPISNDLSDWRE---LDEDHQWVVGHVFGGLTLLDTLQSQDGMA 74

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           A+ + +  P     L    F E+VH+ ++  I  +L       E+F        +  K  
Sbjct: 75  ALRKDVRTPHETAVLNNIQFMESVHAKSYSSIFETLNTPTEIDEIFEWSDSEEFLQNKTK 134

Query: 161 WALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           +          P     +       L  S  F
Sbjct: 135 FIYDLYHDDGHPLKKKISSVFLETFLFYSGFF 166


>gi|297563117|ref|YP_003682091.1| ribonucleotide-diphosphate reductase subunit beta [Nocardiopsis
           dassonvillei subsp. dassonvillei DSM 43111]
 gi|296847565|gb|ADH69585.1| ribonucleotide-diphosphate reductase subunit beta [Nocardiopsis
           dassonvillei subsp. dassonvillei DSM 43111]
          Length = 331

 Score = 66.0 bits (160), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 9/104 (8%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           + +       W P ++ +  D   W+   GL +  R  I R   FF + E  V  +I   
Sbjct: 35  KLFAKGNARFWNPADIDLSRDAEDWE---GLGEGARARILRLCAFFVAGEEAVTEDI-QP 90

Query: 104 IYRHLSNPECR----QYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
             R +   E R     YL + AFEEA H   F+  + +LG+ E 
Sbjct: 91  FLRAM-AAEGRLGDEMYLTQFAFEEARHVQAFRLWLDALGVHED 133


>gi|227876139|ref|ZP_03994257.1| ribonucleoside-diphosphate reductase [Mobiluncus mulieris ATCC
           35243]
 gi|227843295|gb|EEJ53486.1| ribonucleoside-diphosphate reductase [Mobiluncus mulieris ATCC
           35243]
          Length = 333

 Score = 65.6 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 55/129 (42%), Gaps = 6/129 (4%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           +   +AR        +      E +    +N W+P +VP+ +DL  W   N L+D ER +
Sbjct: 14  RHNHSARLRPINWNNITDEKDREIWNRLTSNFWLPEKVPLSNDLPSW---NQLSDMERNV 70

Query: 82  IKRNLGFFASSESLVAN-NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
             R        +++ A    +  I   ++  E +      AF +AVH+ ++  I ++L  
Sbjct: 71  TMRVFTGLTMLDTVQATVGEISQIQDGITEHE-QAIYANIAFMQAVHARSYSSIFSTL-S 128

Query: 141 DEGELFNMY 149
           +  E+   Y
Sbjct: 129 NTPEIDAAY 137


>gi|310764903|gb|ADP09853.1| Ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia sp.
           Ejp617]
          Length = 319

 Score = 65.6 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 52/134 (38%), Gaps = 5/134 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +D+  W   N L  +++ +  R        
Sbjct: 10  NWNKIEDDKDLEVWNRLTSNFWLPEKVPLSNDIPSW---NSLNAEQQQLTIRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++       A+      P     +   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTIQNTLGAPALMADALTPHEEAVMSNISFMEAVHARSYSSIFSTLCHTSDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQ 164
           +   +  KA   LQ
Sbjct: 127 DNAPLQGKAQIILQ 140


>gi|323512793|gb|ADX88247.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
           ICP1_2006_D]
 gi|323513021|gb|ADX88474.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
           ICP1_2006_C]
 gi|323513246|gb|ADX88698.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
           ICP1_2006_B]
 gi|323513473|gb|ADX88924.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
           ICP1_2006_A]
 gi|323513704|gb|ADX89154.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
           ICP1_2005_A]
          Length = 450

 Score = 65.6 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 54/120 (45%), Gaps = 3/120 (2%)

Query: 39  YGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN 98
           Y   ++ +    +  W   E+ +  D   ++S +  T D   ++ + L +   ++SL + 
Sbjct: 37  YPELFKLFKLMKSLDWSEDEIRLHQDRMDFESVDQSTYD---VMIKTLSWQYEADSLASR 93

Query: 99  NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAK 158
           +IV      ++N +  Q +LR +  EA+HS T+  II     +  ++F        +T +
Sbjct: 94  SIVTLFAPFITNSDLSQMMLRWSDNEALHSTTYSEIIRQCLKNPDDIFEEITSNKDVTER 153


>gi|325171172|ref|YP_004251147.1| ribonucleoside diphosphate reductase, beta chain [Vibrio phage
           ICP1]
 gi|323512567|gb|ADX88022.1| ribonucleoside diphosphate reductase, beta chain [Vibrio phage
           ICP1]
 gi|323513935|gb|ADX89384.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
           ICP1_2001_A]
 gi|323514163|gb|ADX89611.1| ribonucleoside triphosphate reductase, beta chain [Vibrio phage
           ICP1_2004_A]
          Length = 450

 Score = 65.6 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 54/120 (45%), Gaps = 3/120 (2%)

Query: 39  YGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN 98
           Y   ++ +    +  W   E+ +  D   ++S +  T D   ++ + L +   ++SL + 
Sbjct: 37  YPELFKLFKLMKSLDWSEDEIRLHQDRMDFESVDQSTYD---VMIKTLSWQYEADSLASR 93

Query: 99  NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAK 158
           +IV      ++N +  Q +LR +  EA+HS T+  II     +  ++F        +T +
Sbjct: 94  SIVTLFAPFITNSDLSQMMLRWSDNEALHSTTYSEIIRQCLKNPDDIFEEITSNKDVTER 153


>gi|5230837|gb|AAD41037.1|AF112536_1 ribonucleotide reductase beta-chain [Corynebacterium glutamicum]
          Length = 334

 Score = 65.6 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 51/127 (40%), Gaps = 7/127 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W     L + E+    R        +++      ++
Sbjct: 36  EVWDRLTGNFWLPEKVPVSNDIKSW---GTLNEVEKAATMRVFTGLTLLDTIQGTVGAIS 92

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY---REVPSITAKAN 160
           +     +      L   AF E+VH+ ++  I  +L     E+ + +    E  ++  KA 
Sbjct: 93  LLPDADSLHEEAVLTNIAFMESVHAKSYSNIFMTLAS-TAEINDAFRWSEENENLQRKAK 151

Query: 161 WALQYTQ 167
             L Y +
Sbjct: 152 IILSYYE 158


>gi|19553723|ref|NP_601725.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           glutamicum ATCC 13032]
 gi|62391364|ref|YP_226766.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           glutamicum ATCC 13032]
 gi|15430572|dbj|BAB64405.1| ribonucleoside diphosphate reductase [Corynebacterium glutamicum]
 gi|21325297|dbj|BAB99918.1| Ribonucleotide reductase beta subunit [Corynebacterium glutamicum
           ATCC 13032]
 gi|41326705|emb|CAF21187.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE 2 BETA CHAIN [Corynebacterium
           glutamicum ATCC 13032]
          Length = 334

 Score = 65.6 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 51/127 (40%), Gaps = 7/127 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +D+  W     L + E+    R        +++      ++
Sbjct: 36  EVWDRLTGNFWLPEKVPVSNDIKSW---GTLNEVEKAATMRVFTGLTLLDTIQGTVGAIS 92

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY---REVPSITAKAN 160
           +     +      L   AF E+VH+ ++  I  +L     E+ + +    E  ++  KA 
Sbjct: 93  LLPDADSLHEEAVLTNIAFMESVHAKSYSNIFMTLAS-TAEINDAFRWSEENENLQRKAK 151

Query: 161 WALQYTQ 167
             L Y +
Sbjct: 152 IILSYYE 158


>gi|322515075|ref|ZP_08068083.1| ribonucleoside-diphosphate reductase beta subunit [Actinobacillus
           ureae ATCC 25976]
 gi|322118955|gb|EFX91132.1| ribonucleoside-diphosphate reductase beta subunit [Actinobacillus
           ureae ATCC 25976]
          Length = 326

 Score = 65.6 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 58/142 (40%), Gaps = 7/142 (4%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
              + P +Y    E   +  +++W+ TE     D+  ++    + D ER ++ R +   A
Sbjct: 10  RLNIKPYEYPELLEFKDAIRHSYWLHTEFNFTGDIQNYR--IDINDHERHVLTRAM--LA 65

Query: 91  SSESLVA-NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY 149
            S+  V        +YR+   PE        A  E  H   + +++  LGL   E+F+  
Sbjct: 66  ISQVEVNVKRFWGELYRYFPKPEMDDVGGTFAESEVRHKDAYSFLLEKLGL--NEMFSQI 123

Query: 150 REVPSITAKANWALQYTQTLSS 171
           +++  +  +  +   + +   +
Sbjct: 124 QDIEPLMNRIRYMESFMKDKDA 145


>gi|307244959|ref|ZP_07527056.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|306854124|gb|EFM86332.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
          Length = 325

 Score = 65.6 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 58/142 (40%), Gaps = 7/142 (4%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
              + P +Y    E   +  +++W+ TE     D+  ++    + D ER ++ R +   A
Sbjct: 9   RLNIKPYEYPELLEFKDAIRHSYWLHTEFNFTGDIQNYR--IDINDHERHVLTRAM--LA 64

Query: 91  SSESLVA-NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY 149
            S+  V        +YR+   PE        A  E  H   + +++  LGL   E+F+  
Sbjct: 65  ISQVEVNVKRFWGELYRYFPKPEMDDVGGTFAESEVRHKDAYSFLLEKLGL--NEMFSQI 122

Query: 150 REVPSITAKANWALQYTQTLSS 171
           +++  +  +  +   + +   +
Sbjct: 123 QDIEPLMNRIRYMESFMKDKDA 144


>gi|269468252|gb|EEZ79942.1| ribonucleotide-diphosphate reductase subunit beta [uncultured SUP05
           cluster bacterium]
          Length = 319

 Score = 65.6 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 45/100 (45%)

Query: 70  SKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
               L  +E+ +   NL +    +S+   +  +A    +S PE   ++   +F E +HS 
Sbjct: 2   DFAKLLPNEKHIFISNLQYQILLDSVQGRSPNIAFLPIVSLPELENWIETWSFSETIHSR 61

Query: 130 TFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
           ++ +II ++  + G +F+   +   I  +A    ++   L
Sbjct: 62  SYTHIIRAIVNEPGVVFDDIMKTDKIIQRAESVSKHYDEL 101


>gi|53728876|ref|ZP_00348266.1| COG0208: Ribonucleotide reductase, beta subunit [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126207635|ref|YP_001052860.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           pleuropneumoniae L20]
 gi|165975603|ref|YP_001651196.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|190149418|ref|YP_001967943.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|303249851|ref|ZP_07336055.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|303251971|ref|ZP_07338142.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307247133|ref|ZP_07529185.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 2 str. S1536]
 gi|307249355|ref|ZP_07531349.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 4 str. M62]
 gi|307251676|ref|ZP_07533581.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|307253912|ref|ZP_07535764.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|307256172|ref|ZP_07537959.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 10 str. D13039]
 gi|307258366|ref|ZP_07540107.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 11 str. 56153]
 gi|307260605|ref|ZP_07542297.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 12 str. 1096]
 gi|307262736|ref|ZP_07544363.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 13 str. N273]
 gi|126096427|gb|ABN73255.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|165875704|gb|ABY68752.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|189914549|gb|ACE60801.1| ribonucleoside-diphosphate reductase beta chain [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|302649401|gb|EFL79586.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|302651418|gb|EFL81570.1| ribonucleoside-diphosphate reductase beta subunit 1 [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306856382|gb|EFM88533.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 2 str. S1536]
 gi|306858649|gb|EFM90711.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 4 str. M62]
 gi|306860873|gb|EFM92881.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
 gi|306863116|gb|EFM95058.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 9 str.
           CVJ13261]
 gi|306865353|gb|EFM97249.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 10 str. D13039]
 gi|306867550|gb|EFM99397.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 11 str. 56153]
 gi|306869682|gb|EFN01467.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 12 str. 1096]
 gi|306871881|gb|EFN03598.1| Ribonucleoside-diphosphate reductase, beta subunit 1
           [Actinobacillus pleuropneumoniae serovar 13 str. N273]
          Length = 325

 Score = 65.6 bits (159), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 58/142 (40%), Gaps = 7/142 (4%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
              + P +Y    E   +  +++W+ TE     D+  ++    + D ER ++ R +   A
Sbjct: 9   RLNIKPYEYPELLEFKDAIRHSYWLHTEFNFTGDIQNYR--IDINDHERHVLTRAM--LA 64

Query: 91  SSESLVA-NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY 149
            S+  V        +YR+   PE        A  E  H   + +++  LGL   E+F+  
Sbjct: 65  ISQVEVNVKRFWGELYRYFPKPEMDDVGGTFAESEVRHKDAYSFLLEKLGL--NEMFSQI 122

Query: 150 REVPSITAKANWALQYTQTLSS 171
           +++  +  +  +   + +   +
Sbjct: 123 QDIEPLMNRIRYMESFMKDKDA 144


>gi|241888586|ref|ZP_04775893.1| ribonucleoside-diphosphate reductase, beta subunit [Gemella
           haemolysans ATCC 10379]
 gi|241864609|gb|EER68984.1| ribonucleoside-diphosphate reductase, beta subunit [Gemella
           haemolysans ATCC 10379]
          Length = 322

 Score = 65.3 bits (158), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 54/154 (35%), Gaps = 8/154 (5%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W+ TE  +  D+  W     L D ER   K+ L      ++   +  +  +
Sbjct: 16  YWRQNIAQFWVDTEFKVSKDIKSWNE--DLNDKEREAYKKVLAGLTGLDTQQGDKGMPLV 73

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPS---ITAKANW 161
             H  +   +         E +H+ ++  I TSL   +   + +   VPS   +  KA  
Sbjct: 74  SLHTEDMRKQAVYSFMGMMEQIHAKSYSTIFTSLIPSQETDYLLDEWVPSNPELQYKAKL 133

Query: 162 ALQYTQTL---SSPSFHYWNKRRRSRILTRSLRF 192
              Y   L     P++  +  R  S  L   + +
Sbjct: 134 IEDYYMKLFKPEVPTYDLYMARVASVFLESYIFY 167


>gi|332087397|gb|EGI92525.1| ribonucleoside-diphosphate reductase 2 subunit beta [Shigella
           boydii 5216-82]
          Length = 319

 Score = 64.9 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 52/137 (37%), Gaps = 5/137 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +    +N W+P +VP+ +D+    ++  LT  E+ +  R        
Sbjct: 10  NWNKITDDKDLEVWNRLTSNFWLPEKVPLSNDIP---ARQTLTVVEQQLTMRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           ++L       ++      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTLQNVIGAPSLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSE 126

Query: 151 EVPSITAKANWALQYTQ 167
           E   +  KA    Q+ +
Sbjct: 127 ENAPLQRKAQIIQQHYR 143


>gi|260578497|ref|ZP_05846410.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
           [Corynebacterium jeikeium ATCC 43734]
 gi|258603378|gb|EEW16642.1| ribonucleoside-diphosphate reductase R2-2, beta subunit
           [Corynebacterium jeikeium ATCC 43734]
          Length = 338

 Score = 64.9 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 55/129 (42%), Gaps = 17/129 (13%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +    +N W+P +VP+ +DL  W   N LTD ER +  +        +++ A      
Sbjct: 36  EIWQRLTSNFWLPEKVPLSNDLPTW---NALTDAERELTTKVFTGLTLLDTVQAT----- 87

Query: 104 IYRHLSNPECR-----QYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR---EVPSI 155
           +      P+ R           AF +AVH+ ++  + +++   E E+   Y      P++
Sbjct: 88  VGEISQIPDARTEHEQAVYANIAFMQAVHARSYSSVFSTMCSSE-EINAAYTWAIGNPAL 146

Query: 156 TAKANWALQ 164
             +A   +Q
Sbjct: 147 QRRATAVMQ 155


>gi|269976951|ref|ZP_06183925.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus
           mulieris 28-1]
 gi|269934782|gb|EEZ91342.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus
           mulieris 28-1]
          Length = 333

 Score = 64.9 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 55/129 (42%), Gaps = 6/129 (4%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           +   +AR        +      E +    +N W+P +VP+ +DL  W   N L+D ER +
Sbjct: 14  RHNHSARLRPINWNNITDEKDREIWNRLTSNFWLPEKVPLSNDLPSW---NQLSDMERSV 70

Query: 82  IKRNLGFFASSESLVAN-NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
             R        +++ A    +  I   ++  E +      AF +AVH+ ++  I ++L  
Sbjct: 71  TMRVFTGLTMLDTVQATVGEISQIQDGITEHE-QAIYANIAFMQAVHARSYSSIFSTL-S 128

Query: 141 DEGELFNMY 149
           +  E+   Y
Sbjct: 129 NTPEIDAAY 137


>gi|70727160|ref|YP_254076.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           haemolyticus JCSC1435]
 gi|68447886|dbj|BAE05470.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus
           haemolyticus JCSC1435]
          Length = 322

 Score = 64.9 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 60/139 (43%), Gaps = 16/139 (11%)

Query: 25  LNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR 84
            N + D+  +           +    +  W+ TE  +  D+A WK+   LT+DE+   KR
Sbjct: 6   WNTQEDMTNMF----------WRQNISQMWVETEFKVSKDIASWKT---LTEDEKNTFKR 52

Query: 85  NLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DE 142
            L      ++  A++ +  I  H ++   +      A  E +H+ ++ +I T+L    + 
Sbjct: 53  ALAGLTGLDTHQADDGMPLIMLHTTDLRKKAVYSFMAMMEQIHAKSYSHIFTTLLPSSET 112

Query: 143 GELFNMYR-EVPSITAKAN 160
             L + +  E P +  K++
Sbjct: 113 NYLLDTWVIEEPHLKYKSD 131


>gi|213962351|ref|ZP_03390614.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga
           sputigena Capno]
 gi|213955017|gb|EEB66336.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga
           sputigena Capno]
          Length = 319

 Score = 64.9 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 49/135 (36%), Gaps = 5/135 (3%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
                P +Y    E   +   + W+ +EV    D+  +KS   L+  E+  +KR L   A
Sbjct: 7   RENYKPFEYPEVMEFVNAMHKSFWVHSEVEFTADIQDFKS--NLSTVEQEAVKRALLGIA 64

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
             E  V       +Y     PE        A  E  HS  +  ++  LG +    F    
Sbjct: 65  QVEVSVKTFWGD-LYDLFPKPEFNGLGATFAECEFRHSEAYARLLEVLGYNNE--FENLL 121

Query: 151 EVPSITAKANWALQY 165
           EVP    + N   +Y
Sbjct: 122 EVPIFKERNNILKEY 136


>gi|306819415|ref|ZP_07453122.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           mulieris ATCC 35239]
 gi|307701705|ref|ZP_07638721.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus
           mulieris FB024-16]
 gi|304647707|gb|EFM45025.1| ribonucleotide-diphosphate reductase subunit beta [Mobiluncus
           mulieris ATCC 35239]
 gi|307613208|gb|EFN92461.1| ribonucleoside-diphosphate reductase, beta subunit [Mobiluncus
           mulieris FB024-16]
          Length = 333

 Score = 64.9 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 55/129 (42%), Gaps = 6/129 (4%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           +   +AR        +      E +    +N W+P +VP+ +DL  W   N L+D ER +
Sbjct: 14  RHNHSARLRPINWNNITDEKDREIWNRLTSNFWLPEKVPLSNDLPSW---NQLSDMERSV 70

Query: 82  IKRNLGFFASSESLVAN-NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
             R        +++ A    +  I   ++  E +      AF +AVH+ ++  I ++L  
Sbjct: 71  TMRVFTGLTMLDTVQATVGEISQIQDGITEHE-QAIYANIAFMQAVHARSYSSIFSTL-S 128

Query: 141 DEGELFNMY 149
           +  E+   Y
Sbjct: 129 NTPEIDAAY 137


>gi|86140897|ref|ZP_01059456.1| ribonucleoside-diphosphate reductase, beta subunit 1
           [Leeuwenhoekiella blandensis MED217]
 gi|85832839|gb|EAQ51288.1| ribonucleoside-diphosphate reductase, beta subunit 1
           [Leeuwenhoekiella blandensis MED217]
          Length = 427

 Score = 64.9 bits (157), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 67/178 (37%), Gaps = 17/178 (9%)

Query: 20  DDKRMLNARSDVN----QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
            +KR L  ++++      L P +Y    E   +  +++W+ TE     D+  +K+  GL+
Sbjct: 95  RNKRALERKTNIFEKRINLKPYEYPELNEYVAAIRHSYWIHTEFNFTSDIQDFKT--GLS 152

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           + ER  IK  +   +  E  V        +R L  PE        A  E  H   + +++
Sbjct: 153 EVERSAIKNTMLAISQIEVAVKTFWGDVHHR-LPKPEIAAVGATFAESEVRHHDAYSHLL 211

Query: 136 TSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
             LGL+E   F   ++ P I  + ++           S  +             L F 
Sbjct: 212 EILGLNEE--FKELKKKPVIMKRVHYL--------ETSLKHAKSDDDREYTESILLFA 259


>gi|319440691|ref|ZP_07989847.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           variabile DSM 44702]
          Length = 335

 Score = 64.9 bits (157), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 49/111 (44%), Gaps = 14/111 (12%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +    +N W+P ++P+ +DL  W+    L+DDER +  R        +++ A      
Sbjct: 37  EVWQRLTSNFWLPEKMPLSNDLPDWR---ALSDDERTLTARVFTGLTLLDTVQAT----- 88

Query: 104 IYRHLSNPECR-----QYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY 149
           +      P+ R           AF +AVH+ ++  + +++     E+ + Y
Sbjct: 89  VGEISQIPDARTEHEQAVYANIAFMQAVHARSYSSVFSTMCS-SAEIEDAY 138


>gi|24379140|ref|NP_721095.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           mutans UA159]
 gi|290580850|ref|YP_003485242.1| putative ribonucleotide reductase small subunit [Streptococcus
           mutans NN2025]
 gi|24377045|gb|AAN58401.1|AE014910_5 putative ribonucleotide reductase, small subunit [Streptococcus
           mutans UA159]
 gi|254997749|dbj|BAH88350.1| putative ribonucleotide reductase small subunit [Streptococcus
           mutans NN2025]
          Length = 319

 Score = 64.9 bits (157), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 55/133 (41%), Gaps = 8/133 (6%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           + N++  +     WEK        W+ T +P+ +DL  W+    L+  E+ ++ +  G  
Sbjct: 9   NWNEIEDVIDKSTWEKLTEQ---FWLDTRIPLSNDLDDWRK---LSAAEKDLVGKVFGGL 62

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFN 147
              +++ + + V AI   +  P     L    F E+VH+ ++  I ++L        +F 
Sbjct: 63  TLLDTMQSQSGVEAIRGDVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKSEIEGIFE 122

Query: 148 MYREVPSITAKAN 160
                  +  KA 
Sbjct: 123 WTNNNEYLQKKAK 135


>gi|199598384|ref|ZP_03211803.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           rhamnosus HN001]
 gi|199590703|gb|EDY98790.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           rhamnosus HN001]
          Length = 326

 Score = 64.9 bits (157), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 57/121 (47%), Gaps = 10/121 (8%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+S   L+ DE+ ++    G     ++L + + + 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRS---LSPDEQWVVGHVFGGLTLLDTLQSQDGMA 75

Query: 103 AIYRHL-SNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKA 159
           ++ +++ +  E       Q F E+VH+ ++  I ++L       E+F+       +  KA
Sbjct: 76  SLRQNIRTQQETAVLNNIQ-FMESVHAKSYSSIFSTLNTPAEIDEIFDWTNHNEHLQYKA 134

Query: 160 N 160
           N
Sbjct: 135 N 135


>gi|68535290|ref|YP_249995.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           jeikeium K411]
 gi|68262889|emb|CAI36377.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           jeikeium K411]
          Length = 338

 Score = 64.9 bits (157), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 55/129 (42%), Gaps = 17/129 (13%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +    +N W+P +VP+ +DL  W   N LTD ER +  +        +++ A      
Sbjct: 36  EIWQRLTSNFWLPEKVPLSNDLPTW---NALTDAERELTTKVFTGLTLLDTVQAT----- 87

Query: 104 IYRHLSNPECR-----QYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR---EVPSI 155
           +      P+ R           AF +AVH+ ++  + +++   E E+   Y      P++
Sbjct: 88  VGEISQIPDARTEHEQAVYANIAFMQAVHARSYSSVFSTMCSSE-EINAAYTWAIGNPAL 146

Query: 156 TAKANWALQ 164
             +A   +Q
Sbjct: 147 QRRATAVMQ 155


>gi|329767978|ref|ZP_08259489.1| ribonucleoside-diphosphate reductase [Gemella haemolysans M341]
 gi|328838463|gb|EGF88071.1| ribonucleoside-diphosphate reductase [Gemella haemolysans M341]
          Length = 322

 Score = 64.9 bits (157), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 54/154 (35%), Gaps = 8/154 (5%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W+ TE  +  D+  W     L D ER   K+ L      ++   +  +  +
Sbjct: 16  YWRQNIAQFWVDTEFKVSKDIKSWNE--DLNDKEREAYKKVLAGLTGLDTQQGDKGMPLV 73

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPS---ITAKANW 161
             H  +   +         E +H+ ++  I TSL   +   + +   VPS   +  KA  
Sbjct: 74  SLHTEDMRKQAVYSFMGMMEQIHAKSYSTIFTSLIPSQETDYLLDEWVPSNPELQFKAKL 133

Query: 162 ALQYTQTL---SSPSFHYWNKRRRSRILTRSLRF 192
              Y   L     P++  +  R  S  L   + +
Sbjct: 134 IEDYYMKLFKPEVPTYDLYMARVASVFLESYIFY 167


>gi|317049232|ref|YP_004116880.1| ribonucleoside-diphosphate reductase [Pantoea sp. At-9b]
 gi|316950849|gb|ADU70324.1| Ribonucleoside-diphosphate reductase [Pantoea sp. At-9b]
          Length = 322

 Score = 64.5 bits (156), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 54/138 (39%), Gaps = 5/138 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +DL  W++   L   ++ +  R        
Sbjct: 13  NWNRIQDEKDLEVWNRLTSNFWLPEKVPLSNDLPAWQT---LDKQQQQLTIRVFTGLTLL 69

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++        +      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 70  DTIQNVIGAPGLMEDALTPHEEAVLSNVSFMEAVHARSYSSIFSTLCNTADVDAAYRWSE 129

Query: 151 EVPSITAKANWALQYTQT 168
           E  ++  KA   L++ + 
Sbjct: 130 ENEALQNKAKIVLEHYRA 147


>gi|281491477|ref|YP_003353457.1| ribonucleoside-diphosphate reductase subunit beta [Lactococcus
           lactis subsp. lactis KF147]
 gi|281375195|gb|ADA64708.1| Ribonucleoside-diphosphate reductase, beta chain [Lactococcus
           lactis subsp. lactis KF147]
          Length = 325

 Score = 64.5 bits (156), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 50/133 (37%), Gaps = 10/133 (7%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY W         +  W+ T VP+ +DL  W+    L   ER    +        ++L +
Sbjct: 27  KYTW-----EKLTSQFWLDTRVPVSNDLDDWRKLPQL---ERDTFAKAFAGLTLLDTLQS 78

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSI 155
            +    +      P+         F E+VH+ ++  I ++L   +   ELFN       +
Sbjct: 79  VDGAEVLKHDARTPQEIACFNNIQFMESVHAKSYSTIFSTLNTKKEIEELFNWVDTNVYM 138

Query: 156 TAKANWALQYTQT 168
             KA    +  ++
Sbjct: 139 QTKAEIINKIYES 151


>gi|229552273|ref|ZP_04440998.1| ribonucleoside-diphosphate reductase [Lactobacillus rhamnosus
           LMS2-1]
 gi|258539683|ref|YP_003174182.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           rhamnosus Lc 705]
 gi|229314345|gb|EEN80318.1| ribonucleoside-diphosphate reductase [Lactobacillus rhamnosus
           LMS2-1]
 gi|257151359|emb|CAR90331.1| Ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           rhamnosus Lc 705]
          Length = 326

 Score = 64.5 bits (156), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 57/121 (47%), Gaps = 10/121 (8%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+S   L+ DE+ ++    G     ++L + + + 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRS---LSPDEQWVVGHVFGGLTLLDTLQSQDGMA 75

Query: 103 AIYRHL-SNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKA 159
           ++ +++ +  E       Q F E+VH+ ++  I ++L       E+F+       +  KA
Sbjct: 76  SLRQNIRTQQETAVLNNIQ-FMESVHAKSYSSIFSTLNTPAEIDEIFDWTNHNEHLQYKA 134

Query: 160 N 160
           N
Sbjct: 135 N 135


>gi|15672956|ref|NP_267130.1| ribonucleotide-diphosphate reductase subunit beta [Lactococcus
           lactis subsp. lactis Il1403]
 gi|12723917|gb|AAK05072.1|AE006332_1 ribonucleoside-diphosphate reductase beta chain [Lactococcus lactis
           subsp. lactis Il1403]
 gi|326406518|gb|ADZ63589.1| ribonucleoside-diphosphate reductase beta chain [Lactococcus lactis
           subsp. lactis CV56]
          Length = 325

 Score = 64.5 bits (156), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 50/133 (37%), Gaps = 10/133 (7%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY W         +  W+ T VP+ +DL  W+    L   ER    +        ++L +
Sbjct: 27  KYTW-----EKLTSQFWLDTRVPVSNDLDDWRKLPQL---ERDTFAKAFAGLTLLDTLQS 78

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSI 155
            +    +      P+         F E+VH+ ++  I ++L   +   ELFN       +
Sbjct: 79  VDGAEVLKHDARTPQEIACFNNIQFMESVHAKSYSTIFSTLNTKKEIEELFNWVDTNVYM 138

Query: 156 TAKANWALQYTQT 168
             KA    +  ++
Sbjct: 139 QTKAEIINKIYES 151


>gi|258508470|ref|YP_003171221.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           rhamnosus GG]
 gi|257148397|emb|CAR87370.1| Ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           rhamnosus GG]
 gi|259649782|dbj|BAI41944.1| ribonucleotide reductase beta subunit [Lactobacillus rhamnosus GG]
          Length = 326

 Score = 64.5 bits (156), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 57/121 (47%), Gaps = 10/121 (8%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+S   L+ DE+ ++    G     ++L + + + 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRS---LSPDEQWVVGHVFGGLTLLDTLQSQDGMA 75

Query: 103 AIYRHL-SNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKA 159
           ++ +++ +  E       Q F E+VH+ ++  I ++L       E+F+       +  KA
Sbjct: 76  SLRQNIRTQQETAVLNNIQ-FMESVHAKSYSSIFSTLNTPAEIDEIFDWTNHNEHLQYKA 134

Query: 160 N 160
           N
Sbjct: 135 N 135


>gi|255325476|ref|ZP_05366578.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           tuberculostearicum SK141]
 gi|255297414|gb|EET76729.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           tuberculostearicum SK141]
          Length = 362

 Score = 64.5 bits (156), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 49/108 (45%), Gaps = 6/108 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN-NIVL 102
           E +     N W+P +VP+ +DL  W+    +T +ER +  R      + +++ A    + 
Sbjct: 64  EVWNRLTANFWLPEKVPLSNDLPAWQK---MTPEERNLTMRVFTGLTTLDTVQATVGEIC 120

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
            I    +  E   Y    AF ++VH+ ++  + ++L     E+   YR
Sbjct: 121 QIQDARTEHEEAVYTNI-AFMQSVHARSYSSVFSTLSS-TKEIDEAYR 166


>gi|329117318|ref|ZP_08246035.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           parauberis NCFD 2020]
 gi|326907723|gb|EGE54637.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           parauberis NCFD 2020]
          Length = 321

 Score = 64.5 bits (156), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 56/133 (42%), Gaps = 8/133 (6%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           + N++  +     WEK        W+ T +P+ +DL  W+    L   E+ ++ +  G  
Sbjct: 9   NWNEIEDVIDKSTWEKLTEQ---FWLDTRIPLSNDLDDWRK---LPAKEKDLVGKVFGGL 62

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFN 147
              +++ +   V AI   +  P     L    F E+VH+ ++  I ++L   +   E+F+
Sbjct: 63  TLLDTMQSETGVEAIRADVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKKEIEEIFD 122

Query: 148 MYREVPSITAKAN 160
                  +  KA 
Sbjct: 123 WTNSNEFLQNKAK 135


>gi|228476905|ref|ZP_04061550.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           salivarius SK126]
 gi|228251479|gb|EEK10624.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           salivarius SK126]
          Length = 319

 Score = 64.5 bits (156), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L+ +E+ ++ +  G     +++ +   V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSAEEKDLVGKVFGGLTLLDTMQSQTGVE 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           AI   +  P     L    F E+VH+ ++  I ++L       E+F        +  KA 
Sbjct: 76  AIRADVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKSEIEEIFEWTNSNEYLQTKAK 135


>gi|73663294|ref|YP_302075.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           saprophyticus subsp. saprophyticus ATCC 15305]
 gi|72495809|dbj|BAE19130.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus
           saprophyticus subsp. saprophyticus ATCC 15305]
          Length = 322

 Score = 64.5 bits (156), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 59/139 (42%), Gaps = 16/139 (11%)

Query: 25  LNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR 84
            N + D+  +           +    +  W+ TE  +  D+A WK+   LTD E+   K+
Sbjct: 6   WNTQEDMTNMF----------WRQNISQMWVETEFKVSKDIASWKT---LTDPEKEAFKK 52

Query: 85  NLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DE 142
            L      ++  A++ +  I  H ++   +      A  E +H+ ++ +I T+L    + 
Sbjct: 53  ALAGLTGLDTHQADDGMPLIMLHTTDLRKKAVYSFMAMMEQIHAKSYSHIFTTLLPSSET 112

Query: 143 GELFNMYR-EVPSITAKAN 160
             L + +  E P +  K++
Sbjct: 113 NYLLDKWVIEEPHLKYKSD 131


>gi|55821276|ref|YP_139718.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           thermophilus LMG 18311]
 gi|55823189|ref|YP_141630.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           thermophilus CNRZ1066]
 gi|116628014|ref|YP_820633.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           thermophilus LMD-9]
 gi|55737261|gb|AAV60903.1| ribonucleotide diphosphate reductase beta subunit [Streptococcus
           thermophilus LMG 18311]
 gi|55739174|gb|AAV62815.1| ribonucleotide diphosphate reductase beta subunit [Streptococcus
           thermophilus CNRZ1066]
 gi|116101291|gb|ABJ66437.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Streptococcus thermophilus LMD-9]
 gi|312278606|gb|ADQ63263.1| Ribonucleoside-diphosphate reductase class Ib beta subunit
           [Streptococcus thermophilus ND03]
          Length = 320

 Score = 64.5 bits (156), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L+ +E+ ++ +  G     +++ +   V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSAEEKDLVGKVFGGLTLLDTMQSQTGVE 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           AI   +  P     L    F E+VH+ ++  I ++L       E+F        +  KA 
Sbjct: 76  AIRADVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKSEIEEIFEWTNSNKYLQTKAK 135


>gi|116511803|ref|YP_809019.1| ribonucleotide-diphosphate reductase subunit beta [Lactococcus
           lactis subsp. cremoris SK11]
 gi|125624347|ref|YP_001032830.1| ribonucleotide-diphosphate reductase subunit beta [Lactococcus
           lactis subsp. cremoris MG1363]
 gi|116107457|gb|ABJ72597.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Lactococcus lactis subsp. cremoris SK11]
 gi|124493155|emb|CAL98119.1| ribonucleoside-diphosphate reductase beta chain [Lactococcus lactis
           subsp. cremoris MG1363]
 gi|300071131|gb|ADJ60531.1| ribonucleotide-diphosphate reductase subunit beta [Lactococcus
           lactis subsp. cremoris NZ9000]
          Length = 325

 Score = 64.5 bits (156), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 50/133 (37%), Gaps = 10/133 (7%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY W         +  W+ T VP+ +DL  W+    L   ER    +        ++L +
Sbjct: 27  KYTW-----EKLTSQFWLDTRVPVSNDLDDWRKLPQL---ERDTFAKAFAGLTLLDTLQS 78

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSI 155
            +    +      P+         F E+VH+ ++  I ++L   +   ELFN       +
Sbjct: 79  VDGAEVLKHDARTPQEIACFNNIQFMESVHAKSYSTIFSTLNTKKEIEELFNWVDTNVYM 138

Query: 156 TAKANWALQYTQT 168
             KA    +  ++
Sbjct: 139 QTKAEIINKIYES 151


>gi|307132178|ref|YP_003884194.1| ribonucleoside-diphosphate reductase 2, subunit beta, ferritin-like
           protein [Dickeya dadantii 3937]
 gi|306529707|gb|ADM99637.1| ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like
           protein [Dickeya dadantii 3937]
          Length = 330

 Score = 64.5 bits (156), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 7/127 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P ++ + +D+  W     L+D ER +  R        ++L       A
Sbjct: 32  EVWNRLTTNFWLPEKIALSNDMPSWAQ---LSDIERQLTLRVFTGLTLLDTLQNTQGAPA 88

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY---REVPSITAKAN 160
           +      P     L    F EAVH+ ++  I ++L L   E+ + Y        +  KA 
Sbjct: 89  LMADALTPHEEAVLSNIGFMEAVHARSYSAIFSTLCL-TSEVDDAYSWSERNQPLQNKAA 147

Query: 161 WALQYTQ 167
             L + Q
Sbjct: 148 LILSHYQ 154


>gi|195977892|ref|YP_002123136.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           equi subsp. zooepidemicus MGCS10565]
 gi|195974597|gb|ACG62123.1| ribonucleotide reductase of class Ib (aerobic) beta subunit NrdF
           [Streptococcus equi subsp. zooepidemicus MGCS10565]
          Length = 319

 Score = 64.5 bits (156), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 58/133 (43%), Gaps = 8/133 (6%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           + N++  +     WEK        W+ T +P+ +DL  W+    L+  E+ ++ +  G  
Sbjct: 9   NWNEIEDVIDKSTWEKLTEQ---FWLDTRIPLSNDLDDWRK---LSAVEKDLVGKVFGGL 62

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFN 147
              +++ + + V AI + +  P     L    F E+VH+ ++  I ++L   +   ++F 
Sbjct: 63  TLLDTMQSESGVEAIRKDVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKKEIEDIFE 122

Query: 148 MYREVPSITAKAN 160
                  +  KA 
Sbjct: 123 WTNNNLFLQNKAK 135


>gi|213159370|ref|YP_002321413.1| rr2 [Oryctes rhinoceros virus]
 gi|202073556|gb|ACH96232.1| rr2 [Oryctes rhinoceros virus]
          Length = 400

 Score = 64.1 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 41/100 (41%), Gaps = 4/100 (4%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDE-RLMIKRNLGFFASSESLV 96
           K+   ++ +L   +  W   E     D   +++   +T  E + ++   +G  A  +S+V
Sbjct: 55  KFKDTYDLWLKHQSCFWSVHENDPSVDRDRFET---MTPKEFQEILLCTVGCIAIGDSIV 111

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
            + I   +   +++ E +     Q   E +H   +  ++ 
Sbjct: 112 LDRIANGLKERVTSIELKAMFSDQEAREFIHKKMYSNMLD 151


>gi|51557509|ref|YP_068343.1| ribonucleotide reductase subunit 2 [Suid herpesvirus 1]
 gi|1710400|sp|P50645|RIR2_SUHVK RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|437737|emb|CAA50977.1| ribonucleotide reductase [Suid herpesvirus 1]
 gi|525265|emb|CAA56776.1| ribonucleotid reductase, small subunit [Suid herpesvirus 1]
 gi|40253968|tpg|DAA02163.1| TPA_exp: small subunit of ribonucleotide reductase [Suid
           herpesvirus 1]
 gi|1090510|prf||2019240B ribonucleotide reductase:SUBUNIT=small
          Length = 303

 Score = 64.1 bits (155), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 43/126 (34%), Gaps = 8/126 (6%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                    +  N W+ T++P+ DD         L++ E    +    F ++++ LV  N
Sbjct: 10  PDMDHLRSLSVANRWLETDLPLGDDAKD---VAALSEPELEFYRFLFAFLSAADDLVNVN 66

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI-ITSLGLD---EGELFNMYREVPSI 155
           +   +    +  +   Y + Q   E VHS  +  I +     D               +I
Sbjct: 67  LGS-LSELFTQKDILHYYIEQECIEVVHSRVYSAIQLMLFRGDAAARERYVRAALRDEAI 125

Query: 156 TAKANW 161
             K  W
Sbjct: 126 RRKVEW 131


>gi|225868773|ref|YP_002744721.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus equi
           subsp. zooepidemicus]
 gi|225702049|emb|CAW99658.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus equi subsp. zooepidemicus]
          Length = 319

 Score = 64.1 bits (155), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 58/133 (43%), Gaps = 8/133 (6%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           + N++  +     WEK        W+ T +P+ +DL  W+    L+  E+ ++ +  G  
Sbjct: 9   NWNEIEDVIDKSTWEKLTEQ---FWLDTRIPLSNDLDDWRK---LSAVEKDLVGKVFGGL 62

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFN 147
              +++ + + V AI + +  P     L    F E+VH+ ++  I ++L   +   ++F 
Sbjct: 63  TLLDTMQSESGVEAIRKDVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKKEIEDIFE 122

Query: 148 MYREVPSITAKAN 160
                  +  KA 
Sbjct: 123 WTNNNLFLQNKAK 135


>gi|291618545|ref|YP_003521287.1| NrdF [Pantoea ananatis LMG 20103]
 gi|291153575|gb|ADD78159.1| NrdF [Pantoea ananatis LMG 20103]
 gi|327394924|dbj|BAK12346.1| ribonucleoside-diphosphate reductase 2 beta subunit NrdF [Pantoea
           ananatis AJ13355]
          Length = 319

 Score = 64.1 bits (155), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 52/138 (37%), Gaps = 5/138 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +DL  W++   L    + +  R        
Sbjct: 10  NWNRIQDEKDLEVWNRLTSNFWLPEKVPLSNDLPAWQT---LDKQHQQLTIRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++        +      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 67  DTIQNVLGAPGLMPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCHTSDVDAAYQWSE 126

Query: 151 EVPSITAKANWALQYTQT 168
           E  ++  KA   L + + 
Sbjct: 127 ENQALQNKAEIILTHYRA 144


>gi|242242101|ref|ZP_04796546.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           epidermidis W23144]
 gi|242234414|gb|EES36726.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           epidermidis W23144]
 gi|319401190|gb|EFV89405.1| ribonucleoside-diphosphate reductase subunit beta [Staphylococcus
           epidermidis FRI909]
          Length = 322

 Score = 64.1 bits (155), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 59/139 (42%), Gaps = 16/139 (11%)

Query: 25  LNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR 84
            N + D+  +           +    +  W+ TE  +  D+A WK+   LTD E+   K+
Sbjct: 6   WNTQEDMTNMF----------WRQNISQMWVETEFKVSKDIASWKT---LTDSEKNTFKK 52

Query: 85  NLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DE 142
            L      ++  A++ +  I  H ++   +      A  E +H+ ++ +I T+L    + 
Sbjct: 53  ALAGLTGLDTHQADDGMPLIMLHTTDLRKKAVYSFMAMMEQIHAKSYSHIFTTLLPSSET 112

Query: 143 GELFNMYR-EVPSITAKAN 160
             L + +  E P +  K++
Sbjct: 113 NYLLDTWVIEEPHLKYKSD 131


>gi|27467432|ref|NP_764069.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           epidermidis ATCC 12228]
 gi|57866341|ref|YP_187991.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           epidermidis RP62A]
 gi|251810165|ref|ZP_04824638.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           epidermidis BCM-HMP0060]
 gi|282875687|ref|ZP_06284558.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           epidermidis SK135]
 gi|293368193|ref|ZP_06614822.1| ribonucleoside-diphosphate reductase subunit beta [Staphylococcus
           epidermidis M23864:W2(grey)]
 gi|27314975|gb|AAO04111.1|AE016745_210 ribonucleoside-diphosphate reductase minor subunit [Staphylococcus
           epidermidis ATCC 12228]
 gi|57636999|gb|AAW53787.1| ribonucleoside-diphosphate reductase 2, beta subunit
           [Staphylococcus epidermidis RP62A]
 gi|251806217|gb|EES58874.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           epidermidis BCM-HMP0060]
 gi|281295714|gb|EFA88237.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           epidermidis SK135]
 gi|291317616|gb|EFE58033.1| ribonucleoside-diphosphate reductase subunit beta [Staphylococcus
           epidermidis M23864:W2(grey)]
 gi|329723280|gb|EGG59810.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           epidermidis VCU144]
 gi|329736749|gb|EGG73014.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           epidermidis VCU028]
 gi|329737954|gb|EGG74178.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           epidermidis VCU045]
          Length = 322

 Score = 64.1 bits (155), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 59/139 (42%), Gaps = 16/139 (11%)

Query: 25  LNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR 84
            N + D+  +           +    +  W+ TE  +  D+A WK+   LTD E+   K+
Sbjct: 6   WNTQEDMTNMF----------WRQNISQMWVETEFKVSKDIASWKT---LTDSEKNTFKK 52

Query: 85  NLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DE 142
            L      ++  A++ +  I  H ++   +      A  E +H+ ++ +I T+L    + 
Sbjct: 53  ALAGLTGLDTHQADDGMPLIMLHTTDLRKKAVYSFMAMMEQIHAKSYSHIFTTLLPSSET 112

Query: 143 GELFNMYR-EVPSITAKAN 160
             L + +  E P +  K++
Sbjct: 113 NYLLDTWVIEEPHLKYKSD 131


>gi|83722609|ref|YP_443887.1| ribonucleotide reductase subunit 2 [Papiine herpesvirus 2]
 gi|75905762|gb|ABA29294.1| UL40 [Papiine herpesvirus 2]
          Length = 339

 Score = 64.1 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 56/173 (32%), Gaps = 11/173 (6%)

Query: 3   NNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQ 62
               + P + G     V D  +     +       +          +  N W+ +E+   
Sbjct: 9   PAAAIQPRERGAAAAAVHDHPV--PDPERY-FYTTQCPDINHLRSLSILNRWLESELVFA 65

Query: 63  DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAF 122
            D        GLTD+E    +    F ++++ LV  N+   +       +   Y + Q  
Sbjct: 66  GDEED---VAGLTDEELNFYRFLFTFLSAADDLVTENLG-GLSGLFPQKDILHYYVEQEA 121

Query: 123 EEAVHSHTFQYI-ITSLGLDEG---ELFNMYREVPSITAKANWALQYTQTLSS 171
            E VHS  +  I +     DE    E        P+I  K +W     Q   S
Sbjct: 122 IEVVHSRVYSIIQLVLFRNDEQARREYVARTIHHPAIRVKVDWLEARVQACES 174


>gi|225870271|ref|YP_002746218.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus equi
           subsp. equi 4047]
 gi|225699675|emb|CAW93380.1| putative ribonucleoside-diphosphate reductase beta chain
           [Streptococcus equi subsp. equi 4047]
          Length = 319

 Score = 64.1 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 58/133 (43%), Gaps = 8/133 (6%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           + N++  +     WEK        W+ T +P+ +DL  W+    L+  E+ ++ +  G  
Sbjct: 9   NWNEIEDVIDKSTWEKLTEQ---FWLDTRIPLSNDLDDWR---RLSAVEKDLVGKVFGGL 62

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFN 147
              +++ + + V AI + +  P     L    F E+VH+ ++  I ++L   +   ++F 
Sbjct: 63  TLLDTMQSESGVEAIRKDVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKKEIEDIFE 122

Query: 148 MYREVPSITAKAN 160
                  +  KA 
Sbjct: 123 WTNNNVFLQNKAK 135


>gi|10140982|ref|NP_065559.1| ribonucleotide-reductase, small subunit [Alcelaphine herpesvirus 1]
 gi|81984051|sp|O36410|RIR2_ALHV1 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|2338023|gb|AAC58107.1| ribonucleotide-reductase, small subunit [Alcelaphine herpesvirus 1]
          Length = 305

 Score = 64.1 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 52/159 (32%), Gaps = 13/159 (8%)

Query: 39  YGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN 98
           +   +E       N W P ++ +  D+   K  + +++ +    K    F   +E+LV  
Sbjct: 13  HPGFFELTQETFQNRWFPAQINLSVDV---KCLSLMSEADVNFYKYLFTFLGMAETLVNF 69

Query: 99  NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD----EGELFNMYREVPS 154
           NI   +       + + Y   Q   E VH   +  I+  L  +      E      +  +
Sbjct: 70  NIDELLVD-FECHDIKHYYCEQMAMECVHGKVYFNILNMLFKNNLAATWEFAEAVLKDEA 128

Query: 155 ITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           +  K  W     +           ++     L   + F+
Sbjct: 129 LQKKLEWLESKIK-----MAKTKAEKVLIFYLIEGVFFI 162


>gi|227833718|ref|YP_002835425.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           aurimucosum ATCC 700975]
 gi|227454734|gb|ACP33487.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 341

 Score = 64.1 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 49/108 (45%), Gaps = 6/108 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN-NIVL 102
           E +     N W+P +VP+ +DL  W+    +T +ER +  R      + +++ A    + 
Sbjct: 43  EVWNRLTANFWLPEKVPLSNDLPAWQ---RMTPEERNLTMRVFTGLTTLDTVQATVGEIC 99

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
            I    +  E   Y    AF ++VH+ ++  + ++L     E+   YR
Sbjct: 100 QIQDARTEHEEAVYTNI-AFMQSVHARSYSSVFSTLSS-TKEIDEAYR 145


>gi|326336655|ref|ZP_08202823.1| ribonucleoside-diphosphate reductase [Capnocytophaga sp. oral taxon
           338 str. F0234]
 gi|325691125|gb|EGD33096.1| ribonucleoside-diphosphate reductase [Capnocytophaga sp. oral taxon
           338 str. F0234]
          Length = 319

 Score = 64.1 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 44/129 (34%), Gaps = 5/129 (3%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
                P +Y    +         W+ +EV    D+  +KS   L+  E+  +KR L   A
Sbjct: 7   RENYKPFEYPEVMKFVDMMHQTFWVHSEVEFTADIQDFKS--NLSLIEKEAVKRALLGIA 64

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
             E  V       +Y     PE        A  E  HS  +  ++  LG +    F    
Sbjct: 65  QVEVAVKTFWGD-LYDIFPKPEFNGLGATFAECEFRHSEAYSRLLEVLGYNNE--FETLL 121

Query: 151 EVPSITAKA 159
           EVP    + 
Sbjct: 122 EVPIFKERN 130


>gi|293572347|ref|ZP_06683339.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E980]
 gi|291607581|gb|EFF36911.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E980]
          Length = 316

 Score = 63.7 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 5/117 (4%)

Query: 46  YLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIY 105
           +  A    W+ T VP+ +DL  W+    L+D E+ ++K+ +G  A  ++L +   + A+ 
Sbjct: 20  WDKATAQFWLDTRVPVSNDLLDWRK---LSDMEKEVVKKAVGGLALLDTLQSEEGLYALK 76

Query: 106 RHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKAN 160
           ++    + R  L    F E++H+ T+  I+ SL    D  E++        +  KA 
Sbjct: 77  KNARTLKERAVLSDFTFMESIHAKTYGTILISLNTFKDIEEIYTWMNNDRRMQFKAK 133


>gi|146322252|ref|YP_001174719.1| putative ribonucleotide reductase subunit beta [Lactococcus lactis]
 gi|145968743|gb|ABQ00021.1| putative ribonucleotide reductase subunit beta [Lactococcus lactis]
          Length = 316

 Score = 63.7 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 5/117 (4%)

Query: 46  YLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIY 105
           +  A    W+ T VP+ +DL  W+    L+D E+ ++K+ +G  A  ++L +   + A+ 
Sbjct: 20  WDKATAQFWLDTRVPVSNDLLDWRK---LSDMEKEVVKKAVGGLALLDTLQSEEGLYALK 76

Query: 106 RHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKAN 160
           ++    + R  L    F E++H+ T+  I+ SL    D  E++        +  KA 
Sbjct: 77  KNARTLKERAVLSDFTFMESIHAKTYGTILISLNTFKDIEEIYTWMNNDRRMQFKAK 133


>gi|158079504|ref|YP_001504317.1| putative ribonucleotide reductase [Enterococcus phage phiEF24C]
 gi|157890348|dbj|BAF81476.1| putative ribonucleotide reductase [Enterococcus phage phiEF24C]
          Length = 327

 Score = 63.7 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 62/150 (41%), Gaps = 11/150 (7%)

Query: 46  YLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIY 105
           +       W+ T VP+ +D+  W     L+D E+ +I +  G     +++ + + V ++ 
Sbjct: 24  WKKLTEQFWLDTRVPVGNDVNDWAK---LSDMEQDLINKVFGGLTLLDTVQSESGVHSLL 80

Query: 106 RHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQY 165
             +        L   AF EAVH+ ++  I ++      E+ N++  V +        LQY
Sbjct: 81  DDVRTQHEEAVLNNIAFMEAVHAKSYSTIFSTFNTPT-EIDNIFEWVATNKR-----LQY 134

Query: 166 TQTLSSPSFHYWNK--RRRSRILTRSLRFL 193
              + +  +       ++ + +L  S  F 
Sbjct: 135 KANIINDIYRNGTPLQKKSASVLLESFLFY 164


>gi|227514022|ref|ZP_03944071.1| ribonucleoside-diphosphate reductase [Lactobacillus fermentum ATCC
           14931]
 gi|227087608|gb|EEI22920.1| ribonucleoside-diphosphate reductase [Lactobacillus fermentum ATCC
           14931]
          Length = 333

 Score = 63.7 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 8/132 (6%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           + NQ+  +     WEK        W+ T +P+ +DL  W+    L DD +  +    G  
Sbjct: 10  NWNQVSDMIDKATWEKLTEQ---FWLDTRIPVSNDLDDWRE---LDDDHKWTVGHVFGGL 63

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFN 147
              ++L +   + A+ + +  P     L    F E+VH+ ++  I ++L   +   E+F+
Sbjct: 64  TLLDTLQSEAGLTALKQDVKTPHETAVLNNIQFMESVHAKSYSTIFSTLNTPDEIDEIFS 123

Query: 148 MYREVPSITAKA 159
                  +  KA
Sbjct: 124 WSDSEEYLQNKA 135


>gi|302321458|gb|ADL16651.1| RNR2 [Abalone herpesvirus Victoria/AUS/2007]
          Length = 642

 Score = 63.7 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 51/137 (37%), Gaps = 10/137 (7%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           +Y    +       N W   E+    DLA+W     L +  R  IK  L F A  + +V 
Sbjct: 73  RYPVLADLADKLQANQWKANEIEPSKDLAVWVD---LPEPVRKCIKGALTFVAVGDIVVK 129

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL------FNMYRE 151
             I +    +    EC ++   Q   E+ H   +   +T+   ++ EL      +    E
Sbjct: 130 EAIPM-HMSNFPLTECGKFFQEQLINESEHQKLYTKFLTTFAHNKEELETLMHAYTNVEE 188

Query: 152 VPSITAKANWALQYTQT 168
              + AK +   +  ++
Sbjct: 189 FAPLKAKVDLINEIYKS 205


>gi|58700007|ref|ZP_00374568.1| ribonucleoside-diphosphate reductase, beta subunit, putative
           [Wolbachia endosymbiont of Drosophila ananassae]
 gi|58533477|gb|EAL57915.1| ribonucleoside-diphosphate reductase, beta subunit, putative
           [Wolbachia endosymbiont of Drosophila ananassae]
          Length = 74

 Score = 63.7 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 34/70 (48%), Gaps = 2/70 (2%)

Query: 102 LAIYRHLSNP-ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKAN 160
           +  Y ++  P E    L   +  E +H   + Y++ ++G+ + E ++ + +  ++  K  
Sbjct: 1   MRHYSNIFKPTEICMMLASFSNMETIHIAAYSYLLDTIGMPDSE-YHAFLKYDAMRKKYE 59

Query: 161 WALQYTQTLS 170
           + L++  + +
Sbjct: 60  YMLEFEDSTT 69


>gi|312862767|ref|ZP_07723007.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           vestibularis F0396]
 gi|322516573|ref|ZP_08069487.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           vestibularis ATCC 49124]
 gi|311101627|gb|EFQ59830.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           vestibularis F0396]
 gi|322124843|gb|EFX96267.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           vestibularis ATCC 49124]
          Length = 320

 Score = 63.7 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 50/120 (41%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L+  E+ ++ +  G     +++ +   V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSAKEKDLVGKVFGGLTLLDTMQSQTGVE 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           AI   +  P     L    F E+VH+ ++  I ++L       E+F        +  KA 
Sbjct: 76  AIRADVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKSEIEEIFEWTNSNKYLQTKAK 135


>gi|262184725|ref|ZP_06044146.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           aurimucosum ATCC 700975]
          Length = 306

 Score = 63.7 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 49/108 (45%), Gaps = 6/108 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN-NIVL 102
           E +     N W+P +VP+ +DL  W+    +T +ER +  R      + +++ A    + 
Sbjct: 8   EVWNRLTANFWLPEKVPLSNDLPAWQ---RMTPEERNLTMRVFTGLTTLDTVQATVGEIC 64

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
            I    +  E   Y    AF ++VH+ ++  + ++L     E+   YR
Sbjct: 65  QIQDARTEHEEAVYTNI-AFMQSVHARSYSSVFSTLSS-TKEIDEAYR 110


>gi|213966196|ref|ZP_03394381.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           amycolatum SK46]
 gi|213951131|gb|EEB62528.1| ribonucleoside-diphosphate reductase, beta subunit [Corynebacterium
           amycolatum SK46]
          Length = 334

 Score = 63.7 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 52/123 (42%), Gaps = 5/123 (4%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           ++   AR        ++     E +     N W+P +VP+ +DLA W+    LTD ER +
Sbjct: 14  RKDPAARLRPINWNRVQDDKDLEVWNRLTANFWLPEKVPLSNDLADWR---RLTDLEREL 70

Query: 82  IKRNLGFFASSESLVAN-NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
             +        +++ A+   +  I    +  E   Y    AF +AVH+ ++  + ++L  
Sbjct: 71  TMKVFTGLTMLDTVQASVGEISQIQDARTEHEEAVYTNI-AFMQAVHAKSYSSVFSTLSN 129

Query: 141 DEG 143
              
Sbjct: 130 TPD 132


>gi|308178758|ref|YP_003918164.1| ribonucleoside-diphosphate reductase subunit beta [Arthrobacter
           arilaitensis Re117]
 gi|307746221|emb|CBT77193.1| ribonucleoside-diphosphate reductase beta chain [Arthrobacter
           arilaitensis Re117]
          Length = 341

 Score = 63.7 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 50/110 (45%), Gaps = 10/110 (9%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +DL  W+    LT +ER +  R        +++ A   V  
Sbjct: 43  EVWNRLTANFWLPEKVPLSNDLPAWEK---LTQEERTLTMRVFTGLTMLDTVQAT--VGE 97

Query: 104 IYRHLSNPEC---RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
           I + + + +           AF +AVH+ ++  + ++L     E+ + YR
Sbjct: 98  ICQ-IQDSQTEHEEAVYTNIAFMQAVHARSYSSVFSTLTSTP-EIDSAYR 145


>gi|184154755|ref|YP_001843095.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           fermentum IFO 3956]
 gi|260663216|ref|ZP_05864108.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           fermentum 28-3-CHN]
 gi|183226099|dbj|BAG26615.1| ribonucleoside-diphosphate reductase beta subunit [Lactobacillus
           fermentum IFO 3956]
 gi|260552408|gb|EEX25459.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           fermentum 28-3-CHN]
 gi|299782855|gb|ADJ40853.1| Ribonucleoside-diphosphate reductase beta subunit [Lactobacillus
           fermentum CECT 5716]
          Length = 333

 Score = 63.7 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 57/132 (43%), Gaps = 8/132 (6%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           + NQ+  +     WEK        W+ T +P+ +DL  W+    L DD +  +    G  
Sbjct: 10  NWNQVSDMIDKATWEKLTEQ---FWLDTRIPVSNDLDDWRE---LDDDHKWTVGHVFGGL 63

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFN 147
              ++L +   + A+ + +  P     L    F E+VH+ ++  I ++L   +   E+F+
Sbjct: 64  TLLDTLQSEAGLTALKQDVKTPHETAVLNNIQFMESVHAKSYSTIFSTLNTPDEIDEIFS 123

Query: 148 MYREVPSITAKA 159
                  + +KA
Sbjct: 124 WSDSEEYLQSKA 135


>gi|239636654|ref|ZP_04677656.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           warneri L37603]
 gi|239598009|gb|EEQ80504.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           warneri L37603]
 gi|330683860|gb|EGG95634.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           epidermidis VCU121]
          Length = 324

 Score = 63.7 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 70/174 (40%), Gaps = 19/174 (10%)

Query: 25  LNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR 84
            N + D+  +           +    +  W+ TE  +  D+A WK+   L++ E+   K+
Sbjct: 6   WNTQEDMTNMF----------WRQNISQMWVETEFKVSKDIASWKT---LSEAEKNTFKK 52

Query: 85  NLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DE 142
            L      ++  A++ +  I  H ++   +      A  E +H+ ++ +I T+L    + 
Sbjct: 53  ALAGLTGLDTHQADDGMPLIMLHTTDLRKKAVYSFMAMMEQIHAKSYSHIFTTLLPSSET 112

Query: 143 GELFNMYR-EVPSITAKANWALQYTQTL---SSPSFHYWNKRRRSRILTRSLRF 192
             L + +  E P +  K++  ++    L    +  F  +  R  S  L   L +
Sbjct: 113 NYLLDTWVIEEPHLKYKSDKIIENYHKLWGKEASIFDQYIARVSSVFLETFLFY 166


>gi|242372965|ref|ZP_04818539.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           epidermidis M23864:W1]
 gi|242349291|gb|EES40892.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           epidermidis M23864:W1]
          Length = 322

 Score = 63.3 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 69/174 (39%), Gaps = 19/174 (10%)

Query: 25  LNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR 84
            N + D+  +           +    +  W+ TE  +  D+A WK+   L+D ER   K+
Sbjct: 6   WNTQEDMTNMF----------WRQNISQMWVETEFKVSKDIASWKT---LSDSERETFKK 52

Query: 85  NLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DE 142
            L      ++  A++ +  I  H ++   +      A  E +H+ ++ +I T+L    + 
Sbjct: 53  ALAGLTGLDTHQADDGMPLIMLHTTDLRKKAVYSFMAMMEQIHAKSYSHIFTTLLPSSET 112

Query: 143 GELFNMYR-EVPSITAKANWALQYTQTL---SSPSFHYWNKRRRSRILTRSLRF 192
             L + +  E P +  K++  +     L    +  F  +  R  S  L   L +
Sbjct: 113 NYLLDTWVIEEPHLKYKSDKIIDNYHKLWGKEASIFDQYIARVSSVFLETFLFY 166


>gi|223043034|ref|ZP_03613082.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           capitis SK14]
 gi|314933044|ref|ZP_07840410.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           caprae C87]
 gi|222443888|gb|EEE49985.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           capitis SK14]
 gi|313654363|gb|EFS18119.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           caprae C87]
          Length = 322

 Score = 63.3 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 69/174 (39%), Gaps = 19/174 (10%)

Query: 25  LNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR 84
            N + D+  +           +    +  W+ TE  +  D+A WK+   LTD E+   K+
Sbjct: 6   WNTQEDMTNMF----------WRQNISQMWVETEFKVSKDIASWKT---LTDSEKETFKK 52

Query: 85  NLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DE 142
            L      ++  A++ +  I  H ++   +      A  E +H+ ++ +I T+L    + 
Sbjct: 53  ALAGLTGLDTHQADDGMPLIMLHTTDLRKKAVYSFMAMMEQIHAKSYSHIFTTLLPSSET 112

Query: 143 GELFNMYR-EVPSITAKANWALQYTQTL---SSPSFHYWNKRRRSRILTRSLRF 192
             L + +  E P +  K++  +     L    +  F  +  R  S  L   L +
Sbjct: 113 NYLLDTWVIEEPHLKYKSDKIIDNYHKLWGKEASIFDQYIARVSSVFLETFLFY 166


>gi|169838797|ref|ZP_02871985.1| ribonucleotide-diphosphate reductase subunit beta [candidate
          division TM7 single-cell isolate TM7a]
          Length = 71

 Score = 63.3 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 3/58 (5%)

Query: 30 DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLG 87
          D  QL P++Y WA+  Y  A  N W P EV +  DLA +K+   L    R+++K+ L 
Sbjct: 16 DGLQLKPVRYEWAYRLYNQAVANTWFPNEVQLVQDLADFKN---LQKTRRMLLKQLLA 70


>gi|116493227|ref|YP_804962.1| ribonucleotide-diphosphate reductase subunit beta [Pediococcus
           pentosaceus ATCC 25745]
 gi|116103377|gb|ABJ68520.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Pediococcus pentosaceus ATCC 25745]
          Length = 317

 Score = 63.3 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 56/152 (36%), Gaps = 8/152 (5%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL+ W+    L +D + ++    G     ++L + + + 
Sbjct: 21  WEKLTEQ---FWLDTRIPISNDLSDWRE---LDEDHKWVVGHVFGGLTLLDTLQSQDGMA 74

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           A+ + +  P     L    F E+VH+ ++  I  +L       E+F        +  K  
Sbjct: 75  ALRKDIRTPHETAVLNNIQFMESVHAKSYSSIFETLNTPSEIDEIFAWSDSEEFLQNKTK 134

Query: 161 WALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
              +       P     +       L  S  F
Sbjct: 135 RIYELYHDDEHPLKKKISSVFLETFLFYSGFF 166


>gi|56694763|ref|YP_164483.1| ribonucleotide reductase subunit 2 [Cercopithecine herpesvirus 2]
 gi|52843315|gb|AAU88106.1| small subunit of ribonucleotide reductase [Cercopithecine
           herpesvirus 2]
          Length = 325

 Score = 63.3 bits (153), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 46/136 (33%), Gaps = 8/136 (5%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                    +  N W+ +E+    D        GLTD+E    +    F ++++ LV  N
Sbjct: 29  PDINHLRSLSILNRWLESELVFAGDEED---VGGLTDEELNFYRFLFTFLSAADDLVTEN 85

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD----EGELFNMYREVPSI 155
           +   +       +   Y + Q   E VHS  +  I   L  +      E        P+I
Sbjct: 86  LG-GLSGLFPQKDILHYYVEQEAIEVVHSRVYSIIQLVLFRNDGQARREYVARTIHHPAI 144

Query: 156 TAKANWALQYTQTLSS 171
             K +W     Q   S
Sbjct: 145 RVKVDWLEARVQACES 160


>gi|226438223|pdb|3EE4|A Chain A, R2-Like Ligand Binding MnFE OXIDASE FROM M. TUBERCULOSIS
          Length = 323

 Score = 62.9 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 12/111 (10%)

Query: 40  GWAW---EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
            WA    + +       W P ++    D A W+    L+DDER    R    F + E  V
Sbjct: 24  NWASLPLKLFAGGNAKFWHPADIDFTRDRADWEK---LSDDERDYATRLCTQFIAGEEAV 80

Query: 97  ANNIVLAIYRHLSNPECR----QYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
             +I       +   E R     YL + AFEEA H+  F+  + ++G+ E 
Sbjct: 81  TEDI-QPFMSAMRA-EGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGISED 129


>gi|222081801|ref|YP_002541166.1| ribonucleotide-diphosphate reductase subunit beta [Agrobacterium
           radiobacter K84]
 gi|221726480|gb|ACM29569.1| ribonucleoside-diphosphate reductase [Agrobacterium radiobacter
           K84]
          Length = 329

 Score = 62.9 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 50/138 (36%), Gaps = 5/138 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +     N W+P +VP+ +D+  W     L  +E+ +  R        
Sbjct: 20  NWNRIEDDKDLEVWNRLTGNFWLPEKVPLSNDIPSWA---ALKPEEQQLTIRVFTGLTLL 76

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++  +     +                +F EAVH+ ++  I ++L    D  + +    
Sbjct: 77  DTIQTSIGAPTLMEDSITSHEEAVYSNISFMEAVHARSYSSIFSTLCSTPDIDDAYRWSE 136

Query: 151 EVPSITAKANWALQYTQT 168
           E   +  K+   L+  + 
Sbjct: 137 ENEHLQRKSALILEQYRN 154


>gi|30984468|ref|NP_851900.1| ribonucleotide reductase subunit 2 [Macacine herpesvirus 1]
 gi|28804676|dbj|BAC58080.1| ribonucleotide reductase small subunit [Cercopithecine herpesvirus
           1]
 gi|30844282|gb|AAP41458.1| small subunit of ribonucleotide reductase [Macacine herpesvirus 1]
          Length = 338

 Score = 62.9 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 47/136 (34%), Gaps = 8/136 (5%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                    +  N W+ +E+    D       +GLTDDE    +    F ++++ LV  N
Sbjct: 42  PDINHLRSLSILNRWLESELVFAGDEED---VHGLTDDELNFYRFLFTFLSAADDLVTEN 98

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD----EGELFNMYREVPSI 155
           +   +       +   Y + Q   E VHS  +  I   L  +      E  +     P+I
Sbjct: 99  LG-GLSGLFPQKDILHYYVEQEAIEVVHSRVYSIIQLVLFHNNEQARREYVSRTIHHPAI 157

Query: 156 TAKANWALQYTQTLSS 171
             K  W     Q   S
Sbjct: 158 RVKVEWLEARVQACES 173


>gi|306806029|ref|ZP_07442697.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu007]
 gi|306970425|ref|ZP_07483086.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu009]
 gi|308347482|gb|EFP36333.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu007]
 gi|308352109|gb|EFP40960.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu009]
          Length = 323

 Score = 62.9 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 12/111 (10%)

Query: 40  GWAW---EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
            WA    + +       W P ++    D A W+    L+DDER    R    F + E  V
Sbjct: 15  NWASLPLKLFAGGNAKFWDPADIDFTRDRADWEK---LSDDERDYATRLCTQFIAGEEAV 71

Query: 97  ANNIVLAIYRHLSNPECR----QYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
             +I       +   E R     YL + AFEEA H+  F+  + ++G+ E 
Sbjct: 72  TEDI-QPFMSAMRA-EGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGISED 120


>gi|15607374|ref|NP_214747.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis H37Rv]
 gi|148659997|ref|YP_001281520.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis H37Ra]
 gi|167968770|ref|ZP_02551047.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis H37Ra]
 gi|306774323|ref|ZP_07412660.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu001]
 gi|306974656|ref|ZP_07487317.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu010]
 gi|307082365|ref|ZP_07491535.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu011]
 gi|307082709|ref|ZP_07491822.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu012]
 gi|81556745|sp|P96416|RIR2H_MYCTU RecName: Full=R2-like ligand binding oxidase; AltName:
           Full=Ribonucleotide reductase R2 subunit homolog;
           AltName: Full=Ribonucleotide reductase small subunit
           homolog
 gi|238055310|sp|A5TYV8|RIR2H_MYCTA RecName: Full=R2-like ligand binding oxidase; AltName:
           Full=Ribonucleotide reductase R2 subunit homolog;
           AltName: Full=Ribonucleotide reductase small subunit
           homolog
 gi|1871607|emb|CAB07000.1| PROBABLE RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDB
           (RIBONUCLEOTIDE REDUCTASE SMALL CHAIN) [Mycobacterium
           tuberculosis H37Rv]
 gi|148504149|gb|ABQ71958.1| ribonucleoside-diphosphate reductase subunit beta NrdB
           [Mycobacterium tuberculosis H37Ra]
 gi|308217156|gb|EFO76555.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu001]
 gi|308356059|gb|EFP44910.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu010]
 gi|308360014|gb|EFP48865.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu011]
 gi|308367580|gb|EFP56431.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu012]
          Length = 314

 Score = 62.9 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 12/111 (10%)

Query: 40  GWAW---EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
            WA    + +       W P ++    D A W+    L+DDER    R    F + E  V
Sbjct: 15  NWASLPLKLFAGGNAKFWHPADIDFTRDRADWEK---LSDDERDYATRLCTQFIAGEEAV 71

Query: 97  ANNIVLAIYRHLSNPECR----QYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
             +I       +   E R     YL + AFEEA H+  F+  + ++G+ E 
Sbjct: 72  TEDI-QPFMSAMRA-EGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGISED 120


>gi|296167463|ref|ZP_06849862.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           parascrofulaceum ATCC BAA-614]
 gi|295897211|gb|EFG76818.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           parascrofulaceum ATCC BAA-614]
          Length = 305

 Score = 62.9 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 10/114 (8%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W P ++    D A W+    LT+DER    R    F + E  V  +I    
Sbjct: 15  LFAGGNAKFWNPADIDFSRDRADWEQ---LTEDERHYAIRLCAEFIAGEEAVTEDI-QPF 70

Query: 105 YRHLSNPECR----QYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPS 154
              +   E R     YL + AFEEA H   F+  + ++G+ E  L     ++P+
Sbjct: 71  MSAMRV-EGRLGDEMYLTQFAFEEAKHVQVFRMWLDAVGVTED-LHQYLDDIPT 122


>gi|294994707|ref|ZP_06800398.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 210]
          Length = 317

 Score = 62.9 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 12/111 (10%)

Query: 40  GWAW---EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
            WA    + +       W P ++    D A W+    L+DDER    R    F + E  V
Sbjct: 15  NWASLPLKLFAGGNAKFWDPADIDFTRDRADWEK---LSDDERDYATRLCTQFIAGEEAV 71

Query: 97  ANNIVLAIYRHLSNPECR----QYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
             +I       +   E R     YL + AFEEA H+  F+  + ++G+ E 
Sbjct: 72  TEDI-QPFMSAMRA-EGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGISED 120


>gi|254233615|ref|ZP_04926941.1| ribonucleoside-diphosphate reductase (beta chain) nrdB
           [Mycobacterium tuberculosis C]
 gi|124603408|gb|EAY61683.1| ribonucleoside-diphosphate reductase (beta chain) nrdB
           [Mycobacterium tuberculosis C]
          Length = 321

 Score = 62.9 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 12/111 (10%)

Query: 40  GWAW---EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
            WA    + +       W P ++    D A W+    L+DDER    R    F + E  V
Sbjct: 15  NWASLPLKLFAGGNAKFWDPADIDFTRDRADWEK---LSDDERDYATRLCTQFIAGEEAV 71

Query: 97  ANNIVLAIYRHLSNPECR----QYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
             +I       +   E R     YL + AFEEA H+  F+  + ++G+ E 
Sbjct: 72  TEDI-QPFMSAMRA-EGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGISED 120


>gi|227504052|ref|ZP_03934101.1| ribonucleoside-diphosphate reductase [Corynebacterium striatum ATCC
           6940]
 gi|227199382|gb|EEI79430.1| ribonucleoside-diphosphate reductase [Corynebacterium striatum ATCC
           6940]
          Length = 304

 Score = 62.9 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 6/108 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN-NIVL 102
           E +     N W+P +VP+ +DL+ W+    +T  ER +  R      + +++ A    + 
Sbjct: 8   EVWNRLTANFWLPEKVPLSNDLSAWQK---MTPSERNLTMRVFTGLTTLDTVQATVGEIC 64

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
            I    +  E +      AF ++VH+ ++  + ++L     E+   YR
Sbjct: 65  QIQDARTEHE-QAVYTNIAFMQSVHARSYSSVFSTLSS-TKEIDEAYR 110


>gi|118470345|ref|YP_884771.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           smegmatis str. MC2 155]
 gi|238055307|sp|A0QPD3|RIR2H_MYCS2 RecName: Full=R2-like ligand binding oxidase; AltName:
           Full=Ribonucleotide reductase R2 subunit homolog;
           AltName: Full=Ribonucleotide reductase small subunit
           homolog
 gi|118171632|gb|ABK72528.1| ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
           smegmatis str. MC2 155]
          Length = 320

 Score = 62.6 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 10/115 (8%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           + +       W P ++    D A W+    LT+ ER    R    F + E  V  +I   
Sbjct: 22  KLFAGGNAKFWDPADIDFSRDRADWE---ALTEREREYATRLCAEFIAGEEAVTKDI-QP 77

Query: 104 IYRHLSNPECR----QYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPS 154
               +   E R     YL + AFEEA H+  F+  + ++G+   +L ++  EVP+
Sbjct: 78  FMSAMRA-EGRLGDEMYLTQFAFEEAKHTQVFRMWLDAVGV-TDDLHSLIEEVPA 130


>gi|300870141|ref|YP_003785012.1| ribonucleotide-diphosphate reductase subunit beta [Brachyspira
           pilosicoli 95/1000]
 gi|300687840|gb|ADK30511.1| ribonucleotide-diphosphate reductase beta subunit [Brachyspira
           pilosicoli 95/1000]
          Length = 359

 Score = 62.6 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 59/149 (39%), Gaps = 5/149 (3%)

Query: 14  EKRVNVDDKRMLNAR-SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
           EK+ N++++R+         ++  + +  A +   ++  N W   EV  + D       +
Sbjct: 7   EKKPNLENERIFFGDFGHYIRIDSVSHEIARKLKEASEGNTWFSKEVDYKSDKT---RFS 63

Query: 73  GLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
            L +D +   K N+ +    +S V +     + R +++        R A EE +H+ ++ 
Sbjct: 64  SLPEDAQRAFKLNIAYQTLMDSGVTSGFSSILNRIVTSSIWSILYSRIAIEEVIHAESYS 123

Query: 133 Y-IITSLGLDEGELFNMYREVPSITAKAN 160
           Y +    G    E  ++      +  +  
Sbjct: 124 YGLSEVFGHLATETLDLVYNDEFVKHRME 152


>gi|228475302|ref|ZP_04060026.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           hominis SK119]
 gi|228270678|gb|EEK12092.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           hominis SK119]
          Length = 322

 Score = 62.6 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 59/139 (42%), Gaps = 16/139 (11%)

Query: 25  LNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR 84
            N + D+  +           +    +  W+ TE  +  D+A WK+   LT+DE+   KR
Sbjct: 6   WNTQEDMTNMF----------WRQNISQMWVETEFKVSKDIASWKT---LTEDEKNTFKR 52

Query: 85  NLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DE 142
            L      ++  A++ +  I  H ++   +         E +H+ ++ +I T+L    + 
Sbjct: 53  ALAGLTGLDTHQADDGMPLIMLHTTDLRKKAVYSFMQMMEQIHAKSYSHIFTTLLPSSET 112

Query: 143 GELFNMYR-EVPSITAKAN 160
             L + +  E P +  K++
Sbjct: 113 NYLLDTWVIEEPHLKYKSD 131


>gi|307268568|ref|ZP_07549940.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX4248]
 gi|306515057|gb|EFM83600.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX4248]
          Length = 321

 Score = 62.6 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 52/120 (43%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W++   L+D E+  +    G F   +++ + + + 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRT---LSDLEKTTVGYVFGGFTLLDTVQSESGMD 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
            +   +  P     L    F E+VH+ ++  I ++L   +   ++F        +  KA 
Sbjct: 76  QLRNDVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKKEIDDIFEWTNTNKHLQYKAE 135


>gi|314936969|ref|ZP_07844316.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           hominis subsp. hominis C80]
 gi|313655588|gb|EFS19333.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           hominis subsp. hominis C80]
          Length = 322

 Score = 62.6 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 59/139 (42%), Gaps = 16/139 (11%)

Query: 25  LNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR 84
            N + D+  +           +    +  W+ TE  +  D+A WK+   LT+DE+   KR
Sbjct: 6   WNTQEDMTNMF----------WRQNISQMWVETEFKVSKDIASWKT---LTEDEKNTFKR 52

Query: 85  NLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DE 142
            L      ++  A++ +  I  H ++   +         E +H+ ++ +I T+L    + 
Sbjct: 53  ALAGLTGLDTHQADDGMPLIMLHTTDLRKKAVYSFMQMMEQIHAKSYSHIFTTLLPSSET 112

Query: 143 GELFNMYR-EVPSITAKAN 160
             L + +  E P +  K++
Sbjct: 113 NYLLDTWVIEEPHLKYKSD 131


>gi|46401830|ref|YP_006922.1| putative aerobic ribonucleoside diphosphate reductase, small
           subunit [Enterobacteria phage T5]
 gi|45775008|gb|AAS77140.1| putative aerobic ribonucleoside diphosphate reductase, small
           subunit [Enterobacteria phage T5]
 gi|51512032|gb|AAU05231.1| ribonucleotide reductase beta subunit [Enterobacteria phage T5]
 gi|59897231|gb|AAX12026.1| ribonucleoside diphosphate reductase I beta chain [Enterobacteria
           phage T5]
          Length = 381

 Score = 62.6 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 51/130 (39%), Gaps = 3/130 (2%)

Query: 20  DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER 79
           +    L     +   + + +       L A +  W  TE+ ++ D   W     L  + +
Sbjct: 13  NKDLFLGDSLGIADYVRVAHPELERLALLARSQFWTETEISLEADKKQW---PNLPREIQ 69

Query: 80  LMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
            +   NL +   ++S ++     AI   +S PE    L + ++ E +HS  +  II ++ 
Sbjct: 70  EITLLNLAWQTQTDSFISRAPEAAIMPLVSRPELEGMLKQWSYFEDLHSRAYSNIIRNVL 129

Query: 140 LDEGELFNMY 149
            D  E  +  
Sbjct: 130 TDPAEFIDSV 139


>gi|1710396|sp|P50644|RIR2_EHV4 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|515833|emb|CAA53101.1| ribonucleoside-diphosphate reductase [Equid herpesvirus 4]
          Length = 320

 Score = 62.6 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 4/95 (4%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                  L +  N W+ T++P+ DDL        L   ER   +    F ++++ LV  N
Sbjct: 27  PDIEHLRLLSVANRWLDTDLPISDDLKD---VAKLAPAEREFYRFLFAFLSAADDLVNLN 83

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           +   +    +  +   Y + Q   E  HS  +  I
Sbjct: 84  LGD-LSALFTQKDILHYYIEQESIEVTHSRVYSAI 117


>gi|9629745|ref|NP_045237.1| ribonucleotide reductase subunit 2 [Equid herpesvirus 4]
 gi|2605963|gb|AAC59535.1| 20 [Equid herpesvirus 4]
          Length = 320

 Score = 62.6 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 4/95 (4%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                  L +  N W+ T++P+ DDL        L   ER   +    F ++++ LV  N
Sbjct: 27  PDIEHLRLLSVANRWLDTDLPISDDLKD---VAKLAPAEREFYRFLFAFLSAADDLVNLN 83

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           +   +    +  +   Y + Q   E  HS  +  I
Sbjct: 84  LGD-LSALFTQKDILHYYIEQESIEVTHSRVYSAI 117


>gi|296127719|ref|YP_003634971.1| ribonucleotide reductase [Brachyspira murdochii DSM 12563]
 gi|296019535|gb|ADG72772.1| ribonucleotide reductase [Brachyspira murdochii DSM 12563]
          Length = 357

 Score = 62.6 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 47/125 (37%), Gaps = 4/125 (3%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           + +  A +   ++  N W   EV  + D       + L +D +   K N+ +    +S V
Sbjct: 29  VSHEIARKLKEASEGNTWFSKEVDYKSDKT---RFSSLPEDAQRAFKLNIAYQTLMDSGV 85

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY-IITSLGLDEGELFNMYREVPSI 155
            +     + R +++        R A EE +H+ ++ Y +    G    E  ++      +
Sbjct: 86  TSGFSSILNRIVTSSIWSILYARIAIEENIHAESYSYGLSEVFGHQASETLDLVYNDEFV 145

Query: 156 TAKAN 160
             +  
Sbjct: 146 KHRME 150


>gi|15839613|ref|NP_334650.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis CDC1551]
 gi|31791410|ref|NP_853903.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           bovis AF2122/97]
 gi|121636145|ref|YP_976368.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           bovis BCG str. Pasteur 1173P2]
 gi|148821426|ref|YP_001286180.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis F11]
 gi|215406230|ref|ZP_03418411.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 02_1987]
 gi|215414101|ref|ZP_03422758.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 94_M4241A]
 gi|215425440|ref|ZP_03423359.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T92]
 gi|215433154|ref|ZP_03431073.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis EAS054]
 gi|215448517|ref|ZP_03435269.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T85]
 gi|218755972|ref|ZP_03534768.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis GM 1503]
 gi|224988618|ref|YP_002643305.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium
           bovis BCG str. Tokyo 172]
 gi|253797156|ref|YP_003030157.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis KZN 1435]
 gi|260199231|ref|ZP_05766722.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T46]
 gi|260203377|ref|ZP_05770868.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis K85]
 gi|289441609|ref|ZP_06431353.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis T46]
 gi|289552485|ref|ZP_06441695.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis KZN 605]
 gi|289572811|ref|ZP_06453038.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis K85]
 gi|289748002|ref|ZP_06507380.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 02_1987]
 gi|289748709|ref|ZP_06508087.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis T92]
 gi|289756298|ref|ZP_06515676.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis EAS054]
 gi|289760339|ref|ZP_06519717.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T85]
 gi|289764349|ref|ZP_06523727.1| ribonucleoside-diphosphate reductase (beta chain) nrdB
           [Mycobacterium tuberculosis GM 1503]
 gi|297632713|ref|ZP_06950493.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis KZN 4207]
 gi|297729687|ref|ZP_06958805.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis KZN R506]
 gi|298527626|ref|ZP_07015035.1| ribonucleoside-diphosphate reductase (beta chain) nrdB
           [Mycobacterium tuberculosis 94_M4241A]
 gi|306779065|ref|ZP_07417402.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu002]
 gi|306782854|ref|ZP_07421176.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu003]
 gi|306787222|ref|ZP_07425544.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu004]
 gi|306791778|ref|ZP_07430080.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu005]
 gi|306801818|ref|ZP_07438486.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu008]
 gi|313657013|ref|ZP_07813893.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis KZN V2475]
 gi|81422934|sp|Q7U2I1|RIR2H_MYCBO RecName: Full=R2-like ligand binding oxidase; AltName:
           Full=Ribonucleotide reductase R2 subunit homolog;
           AltName: Full=Ribonucleotide reductase small subunit
           homolog
 gi|238055305|sp|A1KF53|RIR2H_MYCBP RecName: Full=R2-like ligand binding oxidase; AltName:
           Full=Ribonucleotide reductase R2 subunit homolog;
           AltName: Full=Ribonucleotide reductase small subunit
           homolog
 gi|13879730|gb|AAK44464.1| ribonucleoside-diphosphate reductase, beta subunit, putative
           [Mycobacterium tuberculosis CDC1551]
 gi|31616995|emb|CAD93102.1| PROBABLE RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDB
           (RIBONUCLEOTIDE REDUCTASE SMALL CHAIN) [Mycobacterium
           bovis AF2122/97]
 gi|121491792|emb|CAL70254.1| Probable ribonucleoside-diphosphate reductase (beta chain) nrdB
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148719953|gb|ABR04578.1| ribonucleoside-diphosphate reductase beta subunit nrdB
           [Mycobacterium tuberculosis F11]
 gi|224771731|dbj|BAH24537.1| ribonucleoside-diphosphate reductase subunit beta [Mycobacterium
           bovis BCG str. Tokyo 172]
 gi|253318659|gb|ACT23262.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis KZN 1435]
 gi|289414528|gb|EFD11768.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis T46]
 gi|289437117|gb|EFD19610.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis KZN 605]
 gi|289537242|gb|EFD41820.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis K85]
 gi|289688530|gb|EFD56018.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis 02_1987]
 gi|289689296|gb|EFD56725.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis T92]
 gi|289696885|gb|EFD64314.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis EAS054]
 gi|289711855|gb|EFD75871.1| ribonucleoside-diphosphate reductase (beta chain) nrdB
           [Mycobacterium tuberculosis GM 1503]
 gi|289715903|gb|EFD79915.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T85]
 gi|298497420|gb|EFI32714.1| ribonucleoside-diphosphate reductase (beta chain) nrdB
           [Mycobacterium tuberculosis 94_M4241A]
 gi|308327916|gb|EFP16767.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu002]
 gi|308332374|gb|EFP21225.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu003]
 gi|308336125|gb|EFP24976.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu004]
 gi|308339757|gb|EFP28608.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu005]
 gi|308351381|gb|EFP40232.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu008]
 gi|323717223|gb|EGB26432.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis CDC1551A]
 gi|326905988|gb|EGE52921.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis W-148]
 gi|328456943|gb|AEB02366.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis KZN 4207]
          Length = 314

 Score = 62.6 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 12/111 (10%)

Query: 40  GWAW---EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
            WA    + +       W P ++    D A W+    L+DDER    R    F + E  V
Sbjct: 15  NWASLPLKLFAGGNAKFWDPADIDFTRDRADWEK---LSDDERDYATRLCTQFIAGEEAV 71

Query: 97  ANNIVLAIYRHLSNPECR----QYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
             +I       +   E R     YL + AFEEA H+  F+  + ++G+ E 
Sbjct: 72  TEDI-QPFMSAMRA-EGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGISED 120


>gi|306795820|ref|ZP_07434122.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu006]
 gi|308343762|gb|EFP32613.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis SUMu006]
          Length = 314

 Score = 62.6 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 12/111 (10%)

Query: 40  GWAW---EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
            WA    + +       W P ++    D A W+    L+DDER    R    F + E  V
Sbjct: 15  NWASLPLKLFAGGNAKFWDPADIDFTRDRADWEK---LSDDERDYATRLCTQFIAGEEAV 71

Query: 97  ANNIVLAIYRHLSNPECR----QYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
             +I       +   E R     YL + AFEEA H+  F+  + ++G+ E 
Sbjct: 72  TEDI-QPFMSAMRA-EGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGISED 120


>gi|254549173|ref|ZP_05139620.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis '98-R604 INH-RIF-EM']
          Length = 311

 Score = 62.6 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 12/111 (10%)

Query: 40  GWAW---EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
            WA    + +       W P ++    D A W+    L+DDER    R    F + E  V
Sbjct: 15  NWASLPLKLFAGGNAKFWDPADIDFTRDRADWEK---LSDDERDYATRLCTQFIAGEEAV 71

Query: 97  ANNIVLAIYRHLSNPECR----QYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
             +I       +   E R     YL + AFEEA H+  F+  + ++G+ E 
Sbjct: 72  TEDI-QPFMSAMRA-EGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGISED 120


>gi|260185097|ref|ZP_05762571.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis CPHL_A]
 gi|289445765|ref|ZP_06435509.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis CPHL_A]
 gi|289418723|gb|EFD15924.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis CPHL_A]
          Length = 314

 Score = 62.6 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 12/111 (10%)

Query: 40  GWAW---EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
            WA    + +       W P ++    D A W+    L+DDER    R    F + E  V
Sbjct: 15  NWASLPLKLFAGGNAKFWDPADIDFTRDRADWEK---LSDDERDYATRLCTQFIAGEEAV 71

Query: 97  ANNIVLAIYRHLSNPECR----QYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
             +I       +   E R     YL + AFEEA H+  F+  + ++G+ E 
Sbjct: 72  TEDI-QPFMSAMRA-EGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGISED 120


>gi|227542806|ref|ZP_03972855.1| ribonucleoside-diphosphate reductase [Corynebacterium
           glucuronolyticum ATCC 51866]
 gi|227181432|gb|EEI62404.1| ribonucleoside-diphosphate reductase [Corynebacterium
           glucuronolyticum ATCC 51866]
          Length = 335

 Score = 62.6 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 53/135 (39%), Gaps = 7/135 (5%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +     N W+P ++P+ +D+  W   N L + E++   R        
Sbjct: 26  NWNEIEDEKDQEVWDRLTGNFWLPEKIPVSNDIPSW---NTLNETEQIATMRVFTGLTLL 82

Query: 93  ESLVAN-NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMY 149
           +++      V  I   +++ E   Y    AF E+VH+ ++  I  +L       + F   
Sbjct: 83  DTIQGTVGAVSLIPDAVTHHEEAVYTNI-AFMESVHAKSYSNIFMTLASTPMINDAFRWS 141

Query: 150 REVPSITAKANWALQ 164
            E  ++  K    L+
Sbjct: 142 EENVNLQRKGEIILR 156


>gi|227488208|ref|ZP_03918524.1| ribonucleoside-diphosphate reductase [Corynebacterium
           glucuronolyticum ATCC 51867]
 gi|227091778|gb|EEI27090.1| ribonucleoside-diphosphate reductase [Corynebacterium
           glucuronolyticum ATCC 51867]
          Length = 335

 Score = 62.6 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 53/135 (39%), Gaps = 7/135 (5%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +     N W+P ++P+ +D+  W   N L + E++   R        
Sbjct: 26  NWNEIEDEKDQEVWDRLTGNFWLPEKIPVSNDIPSW---NTLNETEQIATMRVFTGLTLL 82

Query: 93  ESLVAN-NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMY 149
           +++      V  I   +++ E   Y    AF E+VH+ ++  I  +L       + F   
Sbjct: 83  DTIQGTVGAVSLIPDAVTHHEEAVYTNI-AFMESVHAKSYSNIFMTLASTPMINDAFRWS 141

Query: 150 REVPSITAKANWALQ 164
            E  ++  K    L+
Sbjct: 142 EENVNLQRKGEIILR 156


>gi|260904664|ref|ZP_05912986.1| ribonucleoside-diphosphate reductase beta chain [Brevibacterium
           linens BL2]
          Length = 341

 Score = 62.6 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 6/108 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN-NIVL 102
           E +     N W+P +VP+ +D+  W+    LT  ER +  R        +++ A    + 
Sbjct: 43  EVWNRLTANFWLPEKVPLSNDIPAWQ---RLTQVERTLTMRVFTGLTMLDTVQATVGEIC 99

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
            I    +  E   Y    AF ++VH+ ++  + ++L     E+ + YR
Sbjct: 100 QIQDARTEHEEAVYTNI-AFMQSVHARSYSSVFSTLST-TVEIDDAYR 145


>gi|139472853|ref|YP_001129417.1| ORF60 [Human herpesvirus 8]
 gi|1718316|gb|AAC57145.1| ORF 60 [Human herpesvirus 8 type M]
 gi|2246534|gb|AAB62659.1| ORF 60 [Human herpesvirus 8]
 gi|87196889|gb|ABD28915.1| ORF60 [Human herpesvirus 8]
 gi|261853541|gb|ACY00463.1| ORF60 [Human herpesvirus 8]
 gi|312275208|gb|ADQ57945.1| core gene UL40 family protein [Human herpesvirus 8]
          Length = 305

 Score = 62.6 bits (151), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 56/161 (34%), Gaps = 27/161 (16%)

Query: 51  NNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN---IVLAIYRH 107
            N W P+++P+  D++       L+D ++   +    F   +E LV  N   +V     H
Sbjct: 25  QNRWFPSQIPLHLDVSHVHQ---LSDADKDFYRFLFTFLGMAERLVNFNIEDLVTNFNSH 81

Query: 108 LSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD-EGELF---NMYREVPSITAKANWAL 163
               +   Y   Q   E +H   +  I+     +  GEL          P++  K  W  
Sbjct: 82  ----DVAHYYAEQVAMENIHGVVYANILKIFFNNSRGELLAYAAKIILDPALCEKLEWLH 137

Query: 164 QYTQTLSSPSFHYWNKRRRSRILTRSLRFL--------CRV 196
              +  +        ++    ++   + F+        CRV
Sbjct: 138 SRVRKAT-----TKAQKILMFLIVEGIYFISSFYSISLCRV 173


>gi|259907588|ref|YP_002647944.1| Ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia
           pyrifoliae Ep1/96]
 gi|224963210|emb|CAX54694.1| Ribonucleoside-diphosphate reductase 2, beta subunit [Erwinia
           pyrifoliae Ep1/96]
 gi|283477430|emb|CAY73346.1| ribonucleoside-diphosphate reductase 2 beta chain [Erwinia
           pyrifoliae DSM 12163]
          Length = 319

 Score = 62.2 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 52/135 (38%), Gaps = 7/135 (5%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +D+  W   N L  +++ +  R        
Sbjct: 10  NWNKIEDDKDLEVWNRLTSNFWLPEKVPLSNDIPSW---NSLNAEQQQLTIRVFTGLTLL 66

Query: 93  ESLVAN-NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMY 149
           +++         +   L+  E        +F EAVH+ ++  I ++L    D    +   
Sbjct: 67  DTIQNTLGAPALMADALTQHEEAVMSNI-SFMEAVHARSYSSIFSTLCNTSDVDAAYAWS 125

Query: 150 REVPSITAKANWALQ 164
            +   +  KA   LQ
Sbjct: 126 EDNAPLQGKAQIILQ 140


>gi|116490256|ref|YP_809800.1| ribonucleotide-diphosphate reductase subunit beta [Oenococcus oeni
           PSU-1]
 gi|290889638|ref|ZP_06552728.1| hypothetical protein AWRIB429_0118 [Oenococcus oeni AWRIB429]
 gi|116090981|gb|ABJ56135.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Oenococcus oeni PSU-1]
 gi|290480836|gb|EFD89470.1| hypothetical protein AWRIB429_0118 [Oenococcus oeni AWRIB429]
          Length = 337

 Score = 62.2 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 50/120 (41%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +D+  W+S   L   E  +     G     ++L + + + 
Sbjct: 28  WEKLTEQ---FWLDTRIPISNDMKDWRS---LGPVEHKLYDHVFGGLTMLDTLQSQDGMA 81

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           ++      P  R  L    F E+VH+ ++  I  +L       E+F+   +   +  KAN
Sbjct: 82  SLLDAAVTPHERAVLNNIKFMESVHAKSYSSIFETLDTPAEIDEIFDWASKNEQLQYKAN 141


>gi|315153942|gb|EFT97958.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0031]
          Length = 321

 Score = 62.2 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 51/120 (42%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W++   L+D E+  +    G     +++ + + + 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRT---LSDLEKTTVGYVFGGLTFLDTVQSESGMD 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
            +   +  P     L    F E+VH+ ++  I ++L   +   ++F        +  KA 
Sbjct: 76  QLRNDVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKKEIDDIFEWTNTNKHLQYKAE 135


>gi|295397900|ref|ZP_06807962.1| ribonucleotide-diphosphate reductase subunit beta [Aerococcus
           viridans ATCC 11563]
 gi|294973880|gb|EFG49645.1| ribonucleotide-diphosphate reductase subunit beta [Aerococcus
           viridans ATCC 11563]
          Length = 323

 Score = 62.2 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 62/141 (43%), Gaps = 12/141 (8%)

Query: 28  RSDVNQLLPLKYGWAWEK-----YLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMI 82
             + N  + + +    +      +       W+ T +P+ +DL  W++   L+  E+ MI
Sbjct: 3   NFNENPYIAINWNDIEDMIDKLTWEKLTEQFWLDTRIPLSNDLDTWRT---LSAREQDMI 59

Query: 83  KRNLGFFASSESLVANNIVLAIYRHL-SNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
            +  G     ++L + + + ++   + +  E   Y   Q F E+VH+ ++  I ++L   
Sbjct: 60  GKVFGGLTLLDTLQSEDGMESLKASIRTQHEEAVYNNIQ-FMESVHAKSYSSIFSTLNTP 118

Query: 142 E--GELFNMYREVPSITAKAN 160
           +   ++F   RE   I  KAN
Sbjct: 119 KEIDKIFAWTRENEFIQYKAN 139


>gi|289803661|ref|ZP_06534290.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 106

 Score = 62.2 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 41/100 (41%), Gaps = 3/100 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10  NWNKIQDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSAAEQQLTIRVFTGLTLL 66

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
           +++       ++      P     L   +F EAVH+ ++ 
Sbjct: 67  DTIQNIAGAPSLMADAITPHEEAVLSNISFMEAVHARSYS 106


>gi|219556030|ref|ZP_03535106.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           tuberculosis T17]
 gi|289568136|ref|ZP_06448363.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis T17]
 gi|289541889|gb|EFD45538.1| ribonucleoside-diphosphate reductase subunit beta nrdB
           [Mycobacterium tuberculosis T17]
          Length = 210

 Score = 62.2 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 12/111 (10%)

Query: 40  GWAW---EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
            WA    + +       W P ++    D A W+    L+DDER    R    F + E  V
Sbjct: 15  NWASLPLKLFAGGNAKFWDPADIDFTRDRADWEK---LSDDERDYATRLCTQFIAGEEAV 71

Query: 97  ANNIVLAIYRHLSNPECR----QYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
             +I       +   E R     YL + AFEEA H+  F+  + ++G+ E 
Sbjct: 72  TEDI-QPFMSAMRA-EGRLADEMYLTQFAFEEAKHTQVFRMWLDAVGISED 120


>gi|194172964|ref|YP_002003608.1| ribonucleoside diphosphate reductase beta chain [Escherichia phage
           rv5]
 gi|114796002|gb|ABI79176.1| ribonucleoside diphosphate reductase beta chain [Escherichia phage
           rv5]
          Length = 362

 Score = 62.2 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 61/133 (45%), Gaps = 3/133 (2%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY   +E Y       W   EV +   ++ + + +  T D   ++ + L +   ++S+ A
Sbjct: 33  KYPQLFELYKKQKEQDWAEDEVDLSQSISDFVTCSKSTYD---VMVQTLMWQWEADSVAA 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
            +I+      ++N E    L++Q+  E +H+ T+  I+     +  E+    +E  ++ +
Sbjct: 90  RSIICLFSPFITNSELFTLLMKQSEIEVLHALTYSEIVRQCLPNAREIIEEIQENQNVLS 149

Query: 158 KANWALQYTQTLS 170
           ++   ++Y Q L 
Sbjct: 150 RSGVIVKYMQELE 162


>gi|328957625|ref|YP_004375011.1| ribonucleoside-diphosphate reductase subunit beta [Carnobacterium
           sp. 17-4]
 gi|328673949|gb|AEB29995.1| ribonucleoside-diphosphate reductase subunit beta [Carnobacterium
           sp. 17-4]
          Length = 320

 Score = 62.2 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 59/133 (44%), Gaps = 10/133 (7%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           + N +  +     WEK +      W  T +P+ +DL  W     L  +E+ M+ +  G  
Sbjct: 9   NWNNIEDMIDKLTWEKLVEQ---FWTDTRIPLSNDLDDWA---RLPKNEKDMVGKVFGGL 62

Query: 90  ASSESLVANNIVLAIYRHL-SNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELF 146
              ++L + + V ++ + + +  E   Y   Q F E++H+ ++  I ++L   L+  E+F
Sbjct: 63  TLLDTLQSQDGVQSLKQSIRTQHEEAVYNNIQ-FMESMHAKSYSAIFSTLNSKLEIDEIF 121

Query: 147 NMYREVPSITAKA 159
                   +  KA
Sbjct: 122 QWTNTDELLQLKA 134


>gi|322372696|ref|ZP_08047232.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           sp. C150]
 gi|321277738|gb|EFX54807.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           sp. C150]
          Length = 319

 Score = 62.2 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L+ +E+ ++ +  G     +++ +   V 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---LSAEEKDLVGKVFGGLTLLDTMQSQTGVE 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           AI   +  P     L    F E+VH+ ++  I ++L       ++F        +  KA 
Sbjct: 76  AIRADVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKSEIEDIFEWTNSNEYLQTKAK 135


>gi|225619347|ref|YP_002720573.1| ribonucleoside-diphosphate reductase subunit beta [Brachyspira
           hyodysenteriae WA1]
 gi|225214166|gb|ACN82900.1| ribonucleoside-diphosphate reductase, beta subunit [Brachyspira
           hyodysenteriae WA1]
          Length = 356

 Score = 62.2 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 48/125 (38%), Gaps = 4/125 (3%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           + +  A +   ++  N W   EV  + D       + L +D +   K N+ +    +S V
Sbjct: 29  VSHEVARKLKEASEGNTWFSKEVDYKSDKT---RFSSLPEDAQRAFKLNIAYQTLMDSGV 85

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY-IITSLGLDEGELFNMYREVPSI 155
            +     + R +++        R A EE +H+ ++ Y +    G +  +  ++      +
Sbjct: 86  TSGFSSILNRIVTSSIWSILYARIAIEENIHAESYSYGLSEVFGHEATDTLDLVYNDEFV 145

Query: 156 TAKAN 160
             +  
Sbjct: 146 KHRME 150


>gi|60416874|emb|CAD71197.1| ribonucleoside-diphosphate reductase small subunit [Bacillus
           subtilis]
          Length = 123

 Score = 62.2 bits (150), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 41/106 (38%), Gaps = 6/106 (5%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            Y       W+P E+ +  DL  WK    L  +E+    + L      ++   N  +  +
Sbjct: 21  FYNQNVKQFWLPEEIALNGDLLTWK---YLGKNEQDTYMKVLAGLTLLDTEQGNTGMPIV 77

Query: 105 YRHLSNPECRQYLLRQAFEEA-VHSHTFQYIITSLGLDEG--ELFN 147
             H+   + +  L   A  E  VH+ ++  I  +L   E   E+F 
Sbjct: 78  AEHVEGHQRKAVLNFMAMMENAVHAKSYSNIFLTLAPTEKINEVFE 123


>gi|312869696|ref|ZP_07729843.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           oris PB013-T2-3]
 gi|311094745|gb|EFQ53042.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           oris PB013-T2-3]
          Length = 339

 Score = 61.8 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 61/161 (37%), Gaps = 11/161 (6%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           + N++  +     WEK        W+ T +P+ +D+  W++   L +D +  +    G  
Sbjct: 16  NWNEISDMIDKATWEKLTEQ---FWLDTRIPVSNDMDDWRN---LDEDHQWTVGHVFGGL 69

Query: 90  ASSESLVANNIVLAIYRHL-SNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELF 146
              +++ +   + A+   + +  E       Q F E+VH+ ++  I ++L   +   E+F
Sbjct: 70  TLLDTVQSEAGLTALKEDVKTQHETAVLNNIQ-FMESVHAKSYSTIFSTLNTPDQIDEIF 128

Query: 147 NMYREVPSITAKA-NWALQYTQTLSSPSFHYWNKRRRSRIL 186
           N       +  KA   A  Y      P             L
Sbjct: 129 NWSDTEEYLQNKATKIANMYLNPAEDPLKKKVANVFLETFL 169


>gi|301066519|ref|YP_003788542.1| ribonucleotide reductase subunit beta [Lactobacillus casei str.
           Zhang]
 gi|300438926|gb|ADK18692.1| Ribonucleotide reductase, beta subunit [Lactobacillus casei str.
           Zhang]
          Length = 326

 Score = 61.8 bits (149), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 56/121 (46%), Gaps = 10/121 (8%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+S   L  DE+ ++    G     ++L + + + 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRS---LNHDEQWVVGHVFGGLTLLDTLQSQDGMA 75

Query: 103 AIYRHL-SNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKA 159
           ++ +++ +  E       Q F E+VH+ ++  I ++L       E+F+       +  KA
Sbjct: 76  SLRQNIRTQQETAVLNNIQ-FMESVHAKSYSSIFSTLNTPAEIDEIFDWTNHNEHLQYKA 134

Query: 160 N 160
           N
Sbjct: 135 N 135


>gi|116494955|ref|YP_806689.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           casei ATCC 334]
 gi|191638466|ref|YP_001987632.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           casei BL23]
 gi|227535043|ref|ZP_03965092.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|239631445|ref|ZP_04674476.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|116105105|gb|ABJ70247.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Lactobacillus casei ATCC 334]
 gi|190712768|emb|CAQ66774.1| Ribonucleoside-diphosphate reductase, beta chain [Lactobacillus
           casei BL23]
 gi|227187358|gb|EEI67425.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|239525910|gb|EEQ64911.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|327382498|gb|AEA53974.1| hypothetical protein LC2W_1641 [Lactobacillus casei LC2W]
 gi|327385696|gb|AEA57170.1| hypothetical protein LCBD_1674 [Lactobacillus casei BD-II]
          Length = 326

 Score = 61.8 bits (149), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 56/121 (46%), Gaps = 10/121 (8%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+S   L  DE+ ++    G     ++L + + + 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRS---LNHDEQWVVGHVFGGLTLLDTLQSQDGMA 75

Query: 103 AIYRHL-SNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKA 159
           ++ +++ +  E       Q F E+VH+ ++  I ++L       E+F+       +  KA
Sbjct: 76  SLRQNIRTQQETAVLNNIQ-FMESVHAKSYSSIFSTLNTPAEIDEIFDWTNHNEHLQYKA 134

Query: 160 N 160
           N
Sbjct: 135 N 135


>gi|289824705|ref|ZP_06544204.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
          Length = 141

 Score = 61.8 bits (149), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 35/86 (40%), Gaps = 3/86 (3%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 33  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFE 123
            +  +A+   +S PE   ++   AF 
Sbjct: 90  RSPNVALLPLISIPELETWVETWAFS 115


>gi|258423381|ref|ZP_05686272.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus A9635]
 gi|257846442|gb|EEV70465.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus A9635]
          Length = 323

 Score = 61.8 bits (149), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 60/139 (43%), Gaps = 16/139 (11%)

Query: 25  LNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR 84
            N + D+  +           +    +  W+ TE  +  D+A WK+   L++ E+   K+
Sbjct: 6   WNTQEDMTNMF----------WRQNISQMWVETEFKVSKDIASWKT---LSEAEQDTFKK 52

Query: 85  NLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DE 142
            L      ++  A++ +  +  H ++   +      A  E +H+ ++ +I T+L    + 
Sbjct: 53  ALAGLTGLDTHQADDGMPLVMLHTTDLRKKAVYSFMAMMEQIHAKSYSHIFTTLLPSSET 112

Query: 143 GELFNMY-REVPSITAKAN 160
             L +++  E P +  K++
Sbjct: 113 NYLLDVWVLEEPHLKYKSD 131


>gi|311741268|ref|ZP_07715092.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           pseudogenitalium ATCC 33035]
 gi|311303438|gb|EFQ79517.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           pseudogenitalium ATCC 33035]
          Length = 341

 Score = 61.8 bits (149), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 49/108 (45%), Gaps = 6/108 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN-NIVL 102
           E +     N W+P +VP+ +DL  W+    +T +ER +  R      + +++ A    + 
Sbjct: 43  EVWNRLTTNFWLPEKVPLSNDLPAWQK---MTPEERNLTMRVFTGLTTLDTVQATVGEIC 99

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
            I    +  E   Y    AF ++VH+ ++  + ++L     E+   YR
Sbjct: 100 QIQDARTEHEEAVYTNI-AFMQSVHARSYSSVFSTLSS-TKEIDEAYR 145


>gi|182682906|ref|YP_001837030.1| putative aerobic ribonucleoside diphosphate reductase, small
           subunit [Enterobacteria phage EPS7]
 gi|182630618|gb|ACB97550.1| putative aerobic ribonucleoside diphosphate reductase, small
           subunit [Enterobacteria phage EPS7]
          Length = 381

 Score = 61.8 bits (149), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 49/125 (39%), Gaps = 3/125 (2%)

Query: 20  DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER 79
           +    L     +   + + +       L   +  W  TE+ ++ D   W     L  D +
Sbjct: 13  NADLFLGDSLGIADYVRVAHPELERLALLQRSQFWTETEISLEADKKQW---PNLPRDIQ 69

Query: 80  LMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
            +   NL +   ++S ++     AI   +S PE    L + ++ E +HS  +  II ++ 
Sbjct: 70  EITLLNLAWQTQTDSFISRAPEAAIMPLVSRPELEGMLKQWSYFEDLHSRAYSNIIRNVL 129

Query: 140 LDEGE 144
            D  E
Sbjct: 130 TDPAE 134


>gi|317495971|ref|ZP_07954333.1| ribonucleotide reductase [Gemella moribillum M424]
 gi|316913875|gb|EFV35359.1| ribonucleotide reductase [Gemella moribillum M424]
          Length = 322

 Score = 61.8 bits (149), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 52/154 (33%), Gaps = 8/154 (5%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W+ TE  +  D+  W     L D ER   K+ L      ++   +  +  +
Sbjct: 16  YWRQNIAQFWVDTEFKVSKDIKSWNE--DLNDKERDAYKKVLAGLTGLDTQQGDKGMPLV 73

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELFNMYR-EVPSITAKANW 161
             H  +   +         E +H+ ++  I TSL    +   L + +      +  KA  
Sbjct: 74  SLHTEDMRKQAVYSFMGMMEQMHAKSYSTIFTSLIPSKETDYLLDEWVPNNEELQYKAQL 133

Query: 162 ALQYTQTL---SSPSFHYWNKRRRSRILTRSLRF 192
              Y   L     P++  +  R  S  L   + +
Sbjct: 134 IESYYLKLFKPEVPTYDLYMARVASVFLESYIFY 167


>gi|148543559|ref|YP_001270929.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           reuteri DSM 20016]
 gi|184152966|ref|YP_001841307.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           reuteri JCM 1112]
 gi|227363481|ref|ZP_03847603.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           reuteri MM2-3]
 gi|325681909|ref|ZP_08161427.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           reuteri MM4-1A]
 gi|148530593|gb|ABQ82592.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Lactobacillus reuteri DSM 20016]
 gi|183224310|dbj|BAG24827.1| ribonucleotide diphosphate reductase beta subunit [Lactobacillus
           reuteri JCM 1112]
 gi|227071495|gb|EEI09796.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           reuteri MM2-3]
 gi|324978553|gb|EGC15502.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           reuteri MM4-1A]
          Length = 339

 Score = 61.8 bits (149), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 57/164 (34%), Gaps = 11/164 (6%)

Query: 31  VNQLLPLKYGWAWEK-----YLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
           VNQ   + +    +      +       W+ T +P+ +D+  W+    L DD +  +   
Sbjct: 9   VNQYKAINWNEVSDMIDKATWEKLTEQFWLDTRIPVANDMDDWRE---LDDDHQWTVGHV 65

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--G 143
            G     +++ +   + A+   +  P     L    F E+VH+ ++  I ++L   +   
Sbjct: 66  FGGLTLLDTVQSEAGLTALKEDVKTPHETAVLNNIQFMESVHAKSYSTIFSTLNTPDQIK 125

Query: 144 ELFNMYREVPSITAKA-NWALQYTQTLSSPSFHYWNKRRRSRIL 186
           E+F        +  KA   A  Y      P             L
Sbjct: 126 EIFEWSDTEEYLQNKAVKIANMYLDPSQDPLKKKVANVFLETFL 169


>gi|194468106|ref|ZP_03074092.1| Ribonucleoside-diphosphate reductase [Lactobacillus reuteri 100-23]
 gi|194452959|gb|EDX41857.1| Ribonucleoside-diphosphate reductase [Lactobacillus reuteri 100-23]
          Length = 339

 Score = 61.8 bits (149), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 57/164 (34%), Gaps = 11/164 (6%)

Query: 31  VNQLLPLKYGWAWEK-----YLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
           VNQ   + +    +      +       W+ T +P+ +D+  W+    L DD +  +   
Sbjct: 9   VNQYKAINWNEVSDMIDKATWEKLTEQFWLDTRIPVANDMDDWRE---LDDDHQWTVGHV 65

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--G 143
            G     +++ +   + A+   +  P     L    F E+VH+ ++  I ++L   +   
Sbjct: 66  FGGLTLLDTVQSEAGLTALKEDVKTPHETAVLNNIQFMESVHAKSYSTIFSTLNTPDQIK 125

Query: 144 ELFNMYREVPSITAKA-NWALQYTQTLSSPSFHYWNKRRRSRIL 186
           E+F        +  KA   A  Y      P             L
Sbjct: 126 EIFEWSDTEEYLQNKAVKIANMYLDPSQDPLKKKVANVFLETFL 169


>gi|15923722|ref|NP_371256.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus Mu50]
 gi|15926409|ref|NP_373942.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus N315]
 gi|21282423|ref|NP_645511.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus MW2]
 gi|49482989|ref|YP_040213.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus MRSA252]
 gi|49485604|ref|YP_042825.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus MSSA476]
 gi|57651569|ref|YP_185668.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus COL]
 gi|82750436|ref|YP_416177.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus RF122]
 gi|87162072|ref|YP_493420.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus USA300_FPR3757]
 gi|88194508|ref|YP_499303.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus NCTC 8325]
 gi|148267192|ref|YP_001246135.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus JH9]
 gi|150393241|ref|YP_001315916.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus JH1]
 gi|151220913|ref|YP_001331735.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus str. Newman]
 gi|156979060|ref|YP_001441319.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus Mu3]
 gi|161508997|ref|YP_001574656.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus USA300_TCH1516]
 gi|221141144|ref|ZP_03565637.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus str. JKD6009]
 gi|253315835|ref|ZP_04839048.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus str. CF-Marseille]
 gi|253731358|ref|ZP_04865523.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus USA300_TCH959]
 gi|253732821|ref|ZP_04866986.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus TCH130]
 gi|255005523|ref|ZP_05144124.2| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus Mu50-omega]
 gi|257424852|ref|ZP_05601279.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus 55/2053]
 gi|257427520|ref|ZP_05603919.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus 65-1322]
 gi|257430151|ref|ZP_05606535.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus 68-397]
 gi|257432852|ref|ZP_05609212.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus E1410]
 gi|257435756|ref|ZP_05611804.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus M876]
 gi|257794947|ref|ZP_05643926.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus A9781]
 gi|258418263|ref|ZP_05682528.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A9763]
 gi|258421560|ref|ZP_05684485.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus A9719]
 gi|258430755|ref|ZP_05688467.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A9299]
 gi|258441753|ref|ZP_05691025.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A8115]
 gi|258445806|ref|ZP_05693983.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A6300]
 gi|258449617|ref|ZP_05697719.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A6224]
 gi|258452940|ref|ZP_05700934.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A5948]
 gi|258454017|ref|ZP_05701989.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A5937]
 gi|262049516|ref|ZP_06022386.1| ribonucleotide-diphosphate reductase beta subunit [Staphylococcus
           aureus D30]
 gi|262052319|ref|ZP_06024522.1| ribonucleotide-diphosphate reductase beta subunit [Staphylococcus
           aureus 930918-3]
 gi|269202352|ref|YP_003281621.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus ED98]
 gi|282894500|ref|ZP_06302729.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus A8117]
 gi|282903362|ref|ZP_06311253.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus C160]
 gi|282905140|ref|ZP_06312998.1| ribonucleoside-diphosphate reductase beta subunit [Staphylococcus
           aureus subsp. aureus Btn1260]
 gi|282908118|ref|ZP_06315949.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus WW2703/97]
 gi|282910377|ref|ZP_06318181.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus WBG10049]
 gi|282913572|ref|ZP_06321361.1| ribonucleoside-diphosphate reductase 2, beta subunit
           [Staphylococcus aureus subsp. aureus M899]
 gi|282918525|ref|ZP_06326262.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus C427]
 gi|282922028|ref|ZP_06329725.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus A9765]
 gi|282923491|ref|ZP_06331171.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus C101]
 gi|282926597|ref|ZP_06334227.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus A10102]
 gi|283957564|ref|ZP_06375017.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus A017934/97]
 gi|284023753|ref|ZP_06378151.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus 132]
 gi|293500617|ref|ZP_06666468.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus 58-424]
 gi|293509565|ref|ZP_06668276.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus M809]
 gi|293524151|ref|ZP_06670838.1| ribonucleoside-diphosphate reductase 2, beta subunit
           [Staphylococcus aureus subsp. aureus M1015]
 gi|294849402|ref|ZP_06790145.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus A9754]
 gi|295406453|ref|ZP_06816259.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus A8819]
 gi|295427309|ref|ZP_06819944.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|296275141|ref|ZP_06857648.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus MR1]
 gi|297208541|ref|ZP_06924970.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus ATCC 51811]
 gi|297245179|ref|ZP_06929053.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus A8796]
 gi|297590338|ref|ZP_06948977.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus MN8]
 gi|300912633|ref|ZP_07130076.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus TCH70]
 gi|304381650|ref|ZP_07364299.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus ATCC BAA-39]
 gi|4490610|emb|CAB38643.1| ribonucleotide reductase minor subunit [Staphylococcus aureus]
 gi|13700623|dbj|BAB41920.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus
           aureus subsp. aureus N315]
 gi|14246501|dbj|BAB56894.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus
           aureus subsp. aureus Mu50]
 gi|14329710|emb|CAC40668.1| ribonucleotide-diphosphate reductase beta chain [Staphylococcus
           aureus]
 gi|21203860|dbj|BAB94559.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus
           aureus subsp. aureus MW2]
 gi|49241118|emb|CAG39796.1| ribonucleoside-diphosphate reductase beta chain [Staphylococcus
           aureus subsp. aureus MRSA252]
 gi|49244047|emb|CAG42473.1| ribonucleoside-diphosphate reductase beta chain [Staphylococcus
           aureus subsp. aureus MSSA476]
 gi|57285755|gb|AAW37849.1| ribonucleoside-diphosphate reductase 2, beta subunit
           [Staphylococcus aureus subsp. aureus COL]
 gi|82655967|emb|CAI80371.1| ribonucelotide diphosphate reductase beta chain [Staphylococcus
           aureus RF122]
 gi|87128046|gb|ABD22560.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus USA300_FPR3757]
 gi|87202066|gb|ABD29876.1| ribonucleotide-disphosphate reductase beta chain, putative
           [Staphylococcus aureus subsp. aureus NCTC 8325]
 gi|147740261|gb|ABQ48559.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Staphylococcus aureus subsp. aureus JH9]
 gi|149945693|gb|ABR51629.1| Ribonucleoside-diphosphate reductase [Staphylococcus aureus subsp.
           aureus JH1]
 gi|150373713|dbj|BAF66973.1| ribonucleotide-diphosphate reductase beta chain [Staphylococcus
           aureus subsp. aureus str. Newman]
 gi|156721195|dbj|BAF77612.1| ribonucleoside-diphosphate reductase minor subunit [Staphylococcus
           aureus subsp. aureus Mu3]
 gi|160367806|gb|ABX28777.1| ribonucleoside-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus USA300_TCH1516]
 gi|253724883|gb|EES93612.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus USA300_TCH959]
 gi|253729186|gb|EES97915.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus TCH130]
 gi|257272422|gb|EEV04545.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus 55/2053]
 gi|257275713|gb|EEV07186.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus 65-1322]
 gi|257279348|gb|EEV09949.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus 68-397]
 gi|257282267|gb|EEV12402.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus E1410]
 gi|257284947|gb|EEV15066.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus M876]
 gi|257788919|gb|EEV27259.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus A9781]
 gi|257839056|gb|EEV63535.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A9763]
 gi|257842486|gb|EEV66910.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus A9719]
 gi|257849427|gb|EEV73397.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A9299]
 gi|257852222|gb|EEV76149.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A8115]
 gi|257855382|gb|EEV78320.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A6300]
 gi|257857125|gb|EEV80024.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A6224]
 gi|257859451|gb|EEV82305.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A5948]
 gi|257863882|gb|EEV86638.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus A5937]
 gi|259159759|gb|EEW44800.1| ribonucleotide-diphosphate reductase beta subunit [Staphylococcus
           aureus 930918-3]
 gi|259162352|gb|EEW46924.1| ribonucleotide-diphosphate reductase beta subunit [Staphylococcus
           aureus D30]
 gi|262074642|gb|ACY10615.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus ED98]
 gi|269940309|emb|CBI48686.1| ribonucleoside-diphosphate reductase beta chain [Staphylococcus
           aureus subsp. aureus TW20]
 gi|282314359|gb|EFB44749.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus C101]
 gi|282317659|gb|EFB48031.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus C427]
 gi|282322604|gb|EFB52926.1| ribonucleoside-diphosphate reductase 2, beta subunit
           [Staphylococcus aureus subsp. aureus M899]
 gi|282325769|gb|EFB56077.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus WBG10049]
 gi|282327783|gb|EFB58065.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus WW2703/97]
 gi|282331965|gb|EFB61476.1| ribonucleoside-diphosphate reductase beta subunit [Staphylococcus
           aureus subsp. aureus Btn1260]
 gi|282591490|gb|EFB96562.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus A10102]
 gi|282593686|gb|EFB98678.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus A9765]
 gi|282596317|gb|EFC01278.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus C160]
 gi|282763213|gb|EFC03344.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus A8117]
 gi|283470026|emb|CAQ49237.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus ST398]
 gi|283791015|gb|EFC29830.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus A017934/97]
 gi|285816434|gb|ADC36921.1| Ribonucleotide reductase of class Ib (aerobic), beta subunit
           [Staphylococcus aureus 04-02981]
 gi|290921114|gb|EFD98175.1| ribonucleoside-diphosphate reductase 2, beta subunit
           [Staphylococcus aureus subsp. aureus M1015]
 gi|291095622|gb|EFE25883.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus 58-424]
 gi|291467662|gb|EFF10177.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus M809]
 gi|294823934|gb|EFG40360.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus A9754]
 gi|294968598|gb|EFG44621.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus A8819]
 gi|295128697|gb|EFG58328.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|296886796|gb|EFH25700.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus ATCC 51811]
 gi|297177850|gb|EFH37099.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus A8796]
 gi|297576637|gb|EFH95352.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus MN8]
 gi|298694063|gb|ADI97285.1| ribonucleoside-diphosphate reductase [Staphylococcus aureus subsp.
           aureus ED133]
 gi|300886879|gb|EFK82081.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus TCH70]
 gi|302332442|gb|ADL22635.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus JKD6159]
 gi|302750629|gb|ADL64806.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus str. JKD6008]
 gi|304339753|gb|EFM05698.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus ATCC BAA-39]
 gi|312438843|gb|ADQ77914.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus TCH60]
 gi|312829224|emb|CBX34066.1| ribonucleoside-diphosphate reductase subunit beta (Ribonucleotide
           reductase small subunit) [Staphylococcus aureus subsp.
           aureus ECT-R 2]
 gi|315129414|gb|EFT85407.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus CGS03]
 gi|315194351|gb|EFU24743.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus CGS00]
 gi|315196404|gb|EFU26755.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus CGS01]
 gi|320139937|gb|EFW31798.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus MRSA131]
 gi|320141974|gb|EFW33802.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus MRSA177]
 gi|323438919|gb|EGA96654.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus O11]
 gi|323441867|gb|EGA99507.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           aureus O46]
 gi|329313453|gb|AEB87866.1| Ribonucleoside-diphosphate reductase class Ib beta subunit
           [Staphylococcus aureus subsp. aureus T0131]
 gi|329724628|gb|EGG61135.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus 21172]
 gi|329728537|gb|EGG64970.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus 21189]
          Length = 323

 Score = 61.8 bits (149), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 56/139 (40%), Gaps = 16/139 (11%)

Query: 25  LNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR 84
            N + D+  +           +    +  W+ TE  +  D+A WK+   L++ E+   K+
Sbjct: 6   WNTQEDMTNMF----------WRQNISQMWVETEFKVSKDIASWKT---LSEAEQDTFKK 52

Query: 85  NLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE 144
            L      ++  A++ +  +  H ++   +      A  E +H+ ++ +I T+L      
Sbjct: 53  ALAGLTGLDTHQADDGMPLVMLHTTDLRKKAVYSFMAMMEQIHAKSYSHIFTTLLPSSET 112

Query: 145 LF---NMYREVPSITAKAN 160
            +       E P +  K++
Sbjct: 113 NYLLDEWVLEEPHLKYKSD 131


>gi|88801652|ref|ZP_01117180.1| ribonucleoside-diphosphate reductase, beta subunit [Polaribacter
           irgensii 23-P]
 gi|88782310|gb|EAR13487.1| ribonucleoside-diphosphate reductase, beta subunit [Polaribacter
           irgensii 23-P]
          Length = 424

 Score = 61.8 bits (149), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 55/162 (33%), Gaps = 13/162 (8%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
              L P  Y    E   +  +++W+ TE     D+  +K+   L++ E+  IK  +   +
Sbjct: 107 RLNLKPYDYPALTEYVDAIRHSYWIHTEFNYTSDIQDFKAY--LSETEKSAIKNTMLAIS 164

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
             E  V       IY+ +  PE        A  E  H   + +++  LGL+     N + 
Sbjct: 165 QIEVAVKTFWGD-IYKKMPKPEIGAVGSTFAESEVRHHDAYSHLLEILGLN-----NEFE 218

Query: 151 EVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
            +     K    ++    L   +                + F
Sbjct: 219 NL----KKNPVMMRRVNYLEG-ALKNVKSEDNKEFSESIILF 255


>gi|308187851|ref|YP_003931982.1| ribonucleoside-diphosphate reductase beta chain [Pantoea vagans
           C9-1]
 gi|308058361|gb|ADO10533.1| ribonucleoside-diphosphate reductase beta chain [Pantoea vagans
           C9-1]
          Length = 326

 Score = 61.8 bits (149), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 53/138 (38%), Gaps = 5/138 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +DL  W++   L   ++ +  R        
Sbjct: 17  NWNRIQDDKDLEVWNRLTSNFWLPEKVPLSNDLPGWQT---LDKQQQQLTIRVFTGLTLL 73

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++        +      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 74  DTIQNVIGAPGLMEDAITPHEEAVLSNISFMEAVHARSYSSIFSTLCNTQDVDAAYQWSE 133

Query: 151 EVPSITAKANWALQYTQT 168
           E   +  KA   L++ + 
Sbjct: 134 ENGPLQNKARIILEHYRA 151


>gi|227545165|ref|ZP_03975214.1| ribonucleoside-diphosphate reductase [Lactobacillus reuteri
           CF48-3A]
 gi|300909160|ref|ZP_07126621.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           reuteri SD2112]
 gi|227184848|gb|EEI64919.1| ribonucleoside-diphosphate reductase [Lactobacillus reuteri
           CF48-3A]
 gi|300893025|gb|EFK86384.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           reuteri SD2112]
          Length = 339

 Score = 61.4 bits (148), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 57/164 (34%), Gaps = 11/164 (6%)

Query: 31  VNQLLPLKYGWAWEK-----YLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
           VNQ   + +    +      +       W+ T +P+ +D+  W+    L DD +  +   
Sbjct: 9   VNQYKAINWNEVSDMIDKATWEKLTEQFWLDTRIPVANDMDDWRE---LDDDHQWTVGHV 65

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--G 143
            G     +++ +   + A+   +  P     L    F E+VH+ ++  I ++L   +   
Sbjct: 66  FGGLTLLDTVQSEAGLTALKEDVKTPHETAVLNNIQFMESVHAKSYSTIFSTLNTPDQIK 125

Query: 144 ELFNMYREVPSITAKA-NWALQYTQTLSSPSFHYWNKRRRSRIL 186
           E+F        +  KA   A  Y      P             L
Sbjct: 126 EIFEWSDTEEYLQNKAVKIANMYLDPSQDPLKKKVANVFLETFL 169


>gi|282916074|ref|ZP_06323837.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus D139]
 gi|283769895|ref|ZP_06342787.1| ribonucleoside-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus H19]
 gi|282320022|gb|EFB50369.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus D139]
 gi|283460042|gb|EFC07132.1| ribonucleoside-diphosphate reductase subunit beta [Staphylococcus
           aureus subsp. aureus H19]
          Length = 323

 Score = 61.4 bits (148), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 56/139 (40%), Gaps = 16/139 (11%)

Query: 25  LNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR 84
            N + D+  +           +    +  W+ TE  +  D+A WK+   L++ E+   K+
Sbjct: 6   WNTQEDMTNMF----------WRQNISQMWVETEFKVSKDIASWKT---LSEAEQDTFKK 52

Query: 85  NLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE 144
            L      ++  A++ +  +  H ++   +      A  E +H+ ++ +I T+L      
Sbjct: 53  ALAGLTGLDTHQADDGMPLVMLHTTDLRKKAVYSFMAMMEQIHAKSYSHIFTTLLPSSET 112

Query: 145 LF---NMYREVPSITAKAN 160
            +       E P +  K++
Sbjct: 113 NYLLDEWVLEEPHLKYKSD 131


>gi|269866693|ref|XP_002652360.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220062665|gb|EED41696.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 211

 Score = 61.4 bits (148), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 16/68 (23%)

Query: 130 TFQYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRIL 186
            +  +I +L  D+ E   LFN    +PSI  KA WA ++  +              +   
Sbjct: 1   MYSKLIETLIRDKEEQTYLFNAIENIPSIRKKALWAQKWIAS-------------DTSFD 47

Query: 187 TRSLRFLC 194
           TR + F C
Sbjct: 48  TRCVAFAC 55


>gi|703073|gb|AAA80557.1| ribonucleotide reductase small subunit [Gallid herpesvirus 2]
          Length = 354

 Score = 61.4 bits (148), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 49/141 (34%), Gaps = 9/141 (6%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                    +  N W  TE  + DDL           +E+   +    F ++++ LV  N
Sbjct: 63  PDIGNLRSLSIMNRWTETEFVIADDLEDVGKLK----NEKNFYRFLFTFLSAADDLVNLN 118

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI-ITSLGLD---EGELFNMYREVPSI 155
           I  ++    +  +   Y   Q   EAVHS  +  I +     D     E        P+I
Sbjct: 119 I-DSLLSLFTQKDIHHYYFEQECIEAVHSRAYSIIQLMLFSNDQAARQEYVTSTLRSPAI 177

Query: 156 TAKANWALQYTQTLSSPSFHY 176
            +K  W  +     +S +  Y
Sbjct: 178 LSKLEWLERRVAECTSIAEKY 198


>gi|312162814|ref|YP_003933799.1| ribonucleotide reductase subunit 2 [Saimiriine herpesvirus 1]
 gi|308096447|gb|ADO13787.1| ribonucleotide reductase subunit 2 [Saimiriine herpesvirus 1]
          Length = 338

 Score = 61.4 bits (148), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 52/164 (31%), Gaps = 8/164 (4%)

Query: 2   ANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPM 61
           A +T L P+ +       +D  +             +          +  N W+ TE+  
Sbjct: 4   AESTALFPVSSPCPEEVGNDYPVPTCPHPERYFYTSQCPDINHLRSLSILNRWLETELVF 63

Query: 62  QDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
             D         LT  E    +    F ++++ LV  N+   +       +   Y + Q 
Sbjct: 64  AGDEED---VAALTPGELGFYRFLFTFLSAADDLVTENLG-NLAALFPQKDILHYYVEQE 119

Query: 122 FEEAVHSHTFQYIITSLGLD----EGELFNMYREVPSITAKANW 161
             EAVH+  +  +   L  +      E        P+I  K  W
Sbjct: 120 CIEAVHARVYGIVQLVLFANNEASRREYVAHTINHPAIRDKVEW 163


>gi|260583950|ref|ZP_05851698.1| ribonucleoside-diphosphate reductase, beta subunit [Granulicatella
           elegans ATCC 700633]
 gi|260158576|gb|EEW93644.1| ribonucleoside-diphosphate reductase, beta subunit [Granulicatella
           elegans ATCC 700633]
          Length = 336

 Score = 61.4 bits (148), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 57/134 (42%), Gaps = 10/134 (7%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           D NQ+  +     WEK        W+ T +P+ +DL  W++   L+  E+ ++ +  G  
Sbjct: 26  DWNQVEDMIDKMTWEKLTEQ---FWLDTRIPVSNDLDDWRT---LSPAEKDVVGKVFGGL 79

Query: 90  ASSESLVANNIVLAIYRHL-SNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELF 146
              ++L +      +  ++ +  E   +   Q F E+VH+ ++  I ++L       E+F
Sbjct: 80  TLLDTLQSEEGASLMKDYVRTQHEEAVWNNIQ-FMESVHAKSYSTIFSTLHTKAEIEEIF 138

Query: 147 NMYREVPSITAKAN 160
                   +  KA 
Sbjct: 139 EWTNNNEFLQYKAQ 152


>gi|329575046|gb|EGG56598.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX1467]
          Length = 212

 Score = 61.4 bits (148), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 51/120 (42%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W++   L+D E+  +    G     +++ + + + 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRT---LSDLEKTTVGYVFGGLTLLDTVQSESGMD 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
            +   +  P     L    F E+VH+ ++  I ++L   +   ++F        +  KA 
Sbjct: 76  QLRNDVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKKEIDDIFEWTNTNKHLQYKAE 135


>gi|224475873|ref|YP_002633479.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           carnosus subsp. carnosus TM300]
 gi|222420480|emb|CAL27294.1| ribonucleoside-diphosphate reductase beta chain [Staphylococcus
           carnosus subsp. carnosus TM300]
          Length = 324

 Score = 61.0 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 58/139 (41%), Gaps = 16/139 (11%)

Query: 25  LNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR 84
            N + D+  +           +    +  W+ TE  +  D+A WK+   LT +E+   K+
Sbjct: 6   WNTQEDMTNMF----------WRQNISQMWVETEFKVSKDIASWKT---LTPEEQDTFKK 52

Query: 85  NLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DE 142
            L      ++  A++ +  I  H  +   +      A  E +H+ ++ +I T+L    + 
Sbjct: 53  ALAGLTGLDTHQADDGMPLIMLHTKDLRKKAVYSFMAMMEQIHAKSYSHIFTTLLPSSET 112

Query: 143 GELFNMY-REVPSITAKAN 160
             L + +  E P +  K++
Sbjct: 113 NYLLDTWVLEEPHLKFKSD 131


>gi|306834752|ref|ZP_07467817.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           accolens ATCC 49726]
 gi|304569364|gb|EFM44864.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           accolens ATCC 49726]
          Length = 337

 Score = 61.0 bits (147), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 55/134 (41%), Gaps = 12/134 (8%)

Query: 34  LLPLKYGWAW-----EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
           L P+ +   W     E +    +N W+P +VP+ +D   W   + +   ER +  R    
Sbjct: 24  LRPVNWNRIWDDKDLEVWNRLTSNFWLPEKVPLSNDRNDW---SRMDPAERDLTIRVFTG 80

Query: 89  FASSESLVAN-NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GEL 145
               +++ A    +  I    +  E   Y    AF +AVH+ ++  I ++L   E   + 
Sbjct: 81  LTLLDTVQATVGEISQIQDARTEHEEAVYTNI-AFMQAVHARSYSSIFSTLASTEEIEKS 139

Query: 146 FNMYREVPSITAKA 159
           +    + P +  +A
Sbjct: 140 YAWAVDNPVLQQRA 153


>gi|29375101|ref|NP_814254.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis V583]
 gi|227519132|ref|ZP_03949181.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis TX0104]
 gi|227553836|ref|ZP_03983885.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis HH22]
 gi|229547642|ref|ZP_04436367.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis TX1322]
 gi|229548395|ref|ZP_04437120.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis ATCC 29200]
 gi|255971023|ref|ZP_05421609.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T1]
 gi|255973536|ref|ZP_05424122.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T2]
 gi|256617388|ref|ZP_05474234.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis ATCC
           4200]
 gi|256761391|ref|ZP_05501971.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T3]
 gi|256852443|ref|ZP_05557819.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis T8]
 gi|256957628|ref|ZP_05561799.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis DS5]
 gi|256959663|ref|ZP_05563834.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis Merz96]
 gi|256963238|ref|ZP_05567409.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis
           HIP11704]
 gi|257080134|ref|ZP_05574495.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis JH1]
 gi|257080866|ref|ZP_05575227.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis E1Sol]
 gi|257083550|ref|ZP_05577911.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis Fly1]
 gi|257085823|ref|ZP_05580184.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis D6]
 gi|257088966|ref|ZP_05583327.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis CH188]
 gi|257415187|ref|ZP_05592181.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis
           AR01/DG]
 gi|257418242|ref|ZP_05595236.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T11]
 gi|257420749|ref|ZP_05597739.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis X98]
 gi|293384855|ref|ZP_06630698.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis R712]
 gi|293389145|ref|ZP_06633612.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis S613]
 gi|294780704|ref|ZP_06746065.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis PC1.1]
 gi|300861776|ref|ZP_07107856.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TUSoD Ef11]
 gi|307272281|ref|ZP_07553541.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0855]
 gi|307275556|ref|ZP_07556697.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX2134]
 gi|307282794|ref|ZP_07562994.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0860]
 gi|307288831|ref|ZP_07568809.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0109]
 gi|307290616|ref|ZP_07570524.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0411]
 gi|312900212|ref|ZP_07759524.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0470]
 gi|312904832|ref|ZP_07763972.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0635]
 gi|312908153|ref|ZP_07767131.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis DAPTO 512]
 gi|312952106|ref|ZP_07770987.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0102]
 gi|312979089|ref|ZP_07790804.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis DAPTO 516]
 gi|29342560|gb|AAO80325.1| ribonucleoside-diphosphate reductase 2, beta subunit [Enterococcus
           faecalis V583]
 gi|227073409|gb|EEI11372.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis TX0104]
 gi|227177089|gb|EEI58061.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis HH22]
 gi|229306611|gb|EEN72607.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis ATCC 29200]
 gi|229307134|gb|EEN73121.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis TX1322]
 gi|255962041|gb|EET94517.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T1]
 gi|255966408|gb|EET97030.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T2]
 gi|256596915|gb|EEU16091.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis ATCC
           4200]
 gi|256682642|gb|EEU22337.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T3]
 gi|256712297|gb|EEU27329.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis T8]
 gi|256948124|gb|EEU64756.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis DS5]
 gi|256950159|gb|EEU66791.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis Merz96]
 gi|256953734|gb|EEU70366.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis
           HIP11704]
 gi|256988164|gb|EEU75466.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis JH1]
 gi|256988896|gb|EEU76198.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis E1Sol]
 gi|256991580|gb|EEU78882.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis Fly1]
 gi|256993853|gb|EEU81155.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis D6]
 gi|256997778|gb|EEU84298.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis CH188]
 gi|257157015|gb|EEU86975.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis
           ARO1/DG]
 gi|257160070|gb|EEU90030.1| ribonucleoside-diphosphate reductase [Enterococcus faecalis T11]
 gi|257162573|gb|EEU92533.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis X98]
 gi|291077859|gb|EFE15223.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis R712]
 gi|291081516|gb|EFE18479.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis S613]
 gi|294452314|gb|EFG20755.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis PC1.1]
 gi|295114163|emb|CBL32800.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Enterococcus sp. 7L76]
 gi|300848301|gb|EFK76058.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TUSoD Ef11]
 gi|306498330|gb|EFM67839.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0411]
 gi|306500300|gb|EFM69639.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0109]
 gi|306503650|gb|EFM72881.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0860]
 gi|306507661|gb|EFM76790.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX2134]
 gi|306511170|gb|EFM80180.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0855]
 gi|310625861|gb|EFQ09144.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis DAPTO 512]
 gi|310629888|gb|EFQ13171.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0102]
 gi|310631838|gb|EFQ15121.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0635]
 gi|311288123|gb|EFQ66679.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis DAPTO 516]
 gi|311292573|gb|EFQ71129.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0470]
 gi|315026267|gb|EFT38199.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX2137]
 gi|315028520|gb|EFT40452.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX4000]
 gi|315032246|gb|EFT44178.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0017]
 gi|315035532|gb|EFT47464.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0027]
 gi|315143982|gb|EFT87998.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX2141]
 gi|315146930|gb|EFT90946.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX4244]
 gi|315155004|gb|EFT99020.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0043]
 gi|315158779|gb|EFU02796.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0312]
 gi|315161036|gb|EFU05053.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0645]
 gi|315166222|gb|EFU10239.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX1302]
 gi|315167729|gb|EFU11746.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX1341]
 gi|315170811|gb|EFU14828.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX1342]
 gi|315173869|gb|EFU17886.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX1346]
 gi|315574921|gb|EFU87112.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0309B]
 gi|315576500|gb|EFU88691.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0630]
 gi|315582368|gb|EFU94559.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0309A]
 gi|327534208|gb|AEA93042.1| ribonucleotide-diphosphate reductase subunit beta [Enterococcus
           faecalis OG1RF]
          Length = 321

 Score = 61.0 bits (147), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 51/120 (42%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W++   L+D E+  +    G     +++ + + + 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRT---LSDLEKTTVGYVFGGLTLLDTVQSESGMD 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
            +   +  P     L    F E+VH+ ++  I ++L   +   ++F        +  KA 
Sbjct: 76  QLRNDVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKKEIDDIFEWTNTNKHLQYKAE 135


>gi|323479608|gb|ADX79047.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis 62]
          Length = 321

 Score = 61.0 bits (147), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 51/120 (42%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W++   L+D E+  +    G     +++ + + + 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRT---LSDLEKTTVGYVFGGLTLLDTVQSESGMD 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
            +   +  P     L    F E+VH+ ++  I ++L   +   ++F        +  KA 
Sbjct: 76  QLRNDVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKKEIDDIFEWTNTNKHLQYKAE 135


>gi|118465897|ref|YP_884058.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           avium 104]
 gi|254777375|ref|ZP_05218891.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           avium subsp. avium ATCC 25291]
 gi|238055303|sp|A0QMC0|RIR2H_MYCA1 RecName: Full=R2-like ligand binding oxidase; AltName:
           Full=Ribonucleotide reductase R2 subunit homolog;
           AltName: Full=Ribonucleotide reductase small subunit
           homolog
 gi|118167184|gb|ABK68081.1| ribonucleotide-diphosphate reductase beta subunit [Mycobacterium
           avium 104]
          Length = 311

 Score = 61.0 bits (147), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 10/115 (8%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           + +       W P ++    D A W+    LTDDER    R    F + E  V  +I   
Sbjct: 22  KLFAGGNAKFWNPADIDFSRDRADWE---RLTDDERSYATRLCAEFIAGEESVTQDI-QP 77

Query: 104 IYRHLSNPECR----QYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPS 154
               +   E R     YL + AFEEA H   F+  + ++G+   +L +   +VPS
Sbjct: 78  FMAAMRA-EGRLGDEMYLTQFAFEEAKHVQVFRMWLDAVGV-TDDLHHFLDDVPS 130


>gi|70606887|ref|YP_255757.1| ribonucleotide-diphosphate reductase subunit beta [Sulfolobus
           acidocaldarius DSM 639]
 gi|68567535|gb|AAY80464.1| hypothetical protein Saci_1112 [Sulfolobus acidocaldarius DSM 639]
          Length = 308

 Score = 61.0 bits (147), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 59/154 (38%), Gaps = 30/154 (19%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+K       Y       W P+ + +  D A W   + L D ++ ++      F + E
Sbjct: 25  LFPMK------LYQLGKKLFWDPSTIDLTQDRADW---DKLRDIDKFLMVNVTSKFGAGE 75

Query: 94  SLVANNIVLAIYRHLSN--PECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG-------- 143
             VA ++   I   +     E   YL +  FEEA H   F+  + ++G+ E         
Sbjct: 76  EAVALDLHPLIVTLVKEGRVEEVMYLEQFIFEEAKHVEAFRRFLDAVGVKEDLVELTKDV 135

Query: 144 -----ELFNMYREVPSITAKANWALQYTQTLSSP 172
                ++F  Y E+P    KA W L    +  + 
Sbjct: 136 SPNYAKIF--YEELP----KAMWNLNRDPSPENQ 163


>gi|329769048|ref|ZP_08260470.1| ribonucleoside-diphosphate reductase [Gemella sanguinis M325]
 gi|328839539|gb|EGF89115.1| ribonucleoside-diphosphate reductase [Gemella sanguinis M325]
          Length = 322

 Score = 61.0 bits (147), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 53/154 (34%), Gaps = 8/154 (5%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W+ TE  +  D+  W     L D ER   K+ L      ++   +  +  +
Sbjct: 16  YWRQNIAQFWVDTEFKVSKDIKSWNE--DLNDKERDAYKKVLAGLTGLDTQQGDKGMPLV 73

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVP---SITAKANW 161
             H  +   +         E +H+ ++  I TSL   +   + +   VP    +  KAN 
Sbjct: 74  SLHTEDMRKQAVYSFMGMMEQMHAKSYSTIFTSLIPSKETDYLLDEWVPNNAELQYKANL 133

Query: 162 ALQYTQTLSSPSFHYWNK---RRRSRILTRSLRF 192
              Y   L  P    ++    R  S  L   + +
Sbjct: 134 IESYYMKLFKPEVKTYDLYMARVASVFLESYIFY 167


>gi|41409770|ref|NP_962606.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           avium subsp. paratuberculosis K-10]
 gi|81413257|sp|Q73TP6|RIR2H_MYCPA RecName: Full=R2-like ligand binding oxidase; AltName:
           Full=Ribonucleotide reductase R2 subunit homolog;
           AltName: Full=Ribonucleotide reductase small subunit
           homolog
 gi|41398602|gb|AAS06222.1| NrdB [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 311

 Score = 61.0 bits (147), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 10/115 (8%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           + +       W P ++    D A W+    LTDDER    R    F + E  V  +I   
Sbjct: 22  KLFAGGNAKFWNPADIDFSRDRADWE---RLTDDERSYATRLCAEFIAGEESVTQDI-QP 77

Query: 104 IYRHLSNPECR----QYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPS 154
               +   E R     YL + AFEEA H   F+  + ++G+   +L +   +VPS
Sbjct: 78  FMAAMRA-EGRLGDEMYLTQFAFEEAKHVQVFRMWLDAVGV-TDDLHHFLDDVPS 130


>gi|227826697|ref|YP_002828476.1| ribonucleotide-diphosphate reductase subunit beta [Sulfolobus
           islandicus M.14.25]
 gi|229583861|ref|YP_002842362.1| ribonucleotide-diphosphate reductase subunit beta [Sulfolobus
           islandicus M.16.27]
 gi|227458492|gb|ACP37178.1| ribonucleotide reductase [Sulfolobus islandicus M.14.25]
 gi|228018910|gb|ACP54317.1| ribonucleotide reductase [Sulfolobus islandicus M.16.27]
          Length = 308

 Score = 61.0 bits (147), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 56/154 (36%), Gaps = 30/154 (19%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+K       Y       W P  + +  D   WK    L D E++ I      FA+ E
Sbjct: 25  LFPMK------LYQLGKKLFWDPANIDLSKDAEDWKK---LNDLEKMFIINVGSKFAAGE 75

Query: 94  SLVANNIVLAIYRHLSN--PECRQYLLRQAFEEAVHSHTFQYI---------ITSLGLDE 142
             VA ++   I   +     E   YL +  +EE+ H   F+           +++   D 
Sbjct: 76  EAVALDLHPLIVTLVKEGRVEEVMYLEQFVYEESKHVEAFRRFFDAVNVMEDLSTYTKDL 135

Query: 143 ----GELFNMYREVPSITAKANWALQYTQTLSSP 172
                ++F  Y E+P    KA W L    +  + 
Sbjct: 136 SPNYKKIF--YEELP----KAMWNLSRDPSPENQ 163


>gi|259502687|ref|ZP_05745589.1| ribonucleoside-diphosphate reductase 2 [Lactobacillus antri DSM
           16041]
 gi|259169332|gb|EEW53827.1| ribonucleoside-diphosphate reductase 2 [Lactobacillus antri DSM
           16041]
          Length = 339

 Score = 61.0 bits (147), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 60/165 (36%), Gaps = 13/165 (7%)

Query: 31  VNQLLPLKYGWAWEK-----YLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
           +NQ   + +    +      +       W+ T +P+ +DL  W++   L +D +  +   
Sbjct: 9   LNQYKAINWNEVSDMIDKATWEKLTEQFWLDTRIPVSNDLDDWRN---LDEDHQWTVGHV 65

Query: 86  LGFFASSESLVANNIVLAIYRHL-SNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE-- 142
            G     +++ +   + A+   + +  E       Q F E+VH+ ++  I ++L   +  
Sbjct: 66  FGGLTLLDTVQSEAGMTALKEDVKTQHETAVLNNIQ-FMESVHAKSYSTIFSTLNSPDEI 124

Query: 143 GELFNMYREVPSITAKA-NWALQYTQTLSSPSFHYWNKRRRSRIL 186
            E+FN       +  KA   A  Y      P             L
Sbjct: 125 DEIFNWSDTEEYLQNKATKIANMYLNPAEDPLKKKVANVFLETFL 169


>gi|329729655|gb|EGG66056.1| ribonucleoside-diphosphate reductase, beta subunit [Staphylococcus
           aureus subsp. aureus 21193]
          Length = 323

 Score = 60.6 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 56/139 (40%), Gaps = 16/139 (11%)

Query: 25  LNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR 84
            N + D+  +           +    +  W+ TE  +  D+A WK+   L++ E+   K+
Sbjct: 6   WNTQEDMTNMF----------WRQNISQMWVETEFKVSKDIASWKT---LSETEQDTFKK 52

Query: 85  NLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE 144
            L      ++  A++ +  +  H ++   +      A  E +H+ ++ +I T+L      
Sbjct: 53  ALAGLTGLDTHQADDGMPLVMLHTTDLRKKAVYSFMAMMEQIHAKSYSHIFTTLLPSSET 112

Query: 145 LF---NMYREVPSITAKAN 160
            +       E P +  K++
Sbjct: 113 NYLLDEWVLEEPHLKYKSD 131


>gi|328480216|gb|EGF49142.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           rhamnosus MTCC 5462]
          Length = 115

 Score = 60.6 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 49/100 (49%), Gaps = 8/100 (8%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+S   L+ DE+ ++    G     ++L + + + 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRS---LSPDEQWVVGHVFGGLTLLDTLQSQDGMA 75

Query: 103 AIYRHL-SNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
           ++ +++ +  E       Q F E+VH+ ++  I ++L   
Sbjct: 76  SLRQNIRTQQETAVLNNIQ-FMESVHAKSYSSIFSTLNTP 114


>gi|169631086|ref|YP_001704735.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           abscessus ATCC 19977]
 gi|238055304|sp|B1MHK0|RIR2H_MYCA9 RecName: Full=R2-like ligand binding oxidase; AltName:
           Full=Ribonucleotide reductase R2 subunit homolog;
           AltName: Full=Ribonucleotide reductase small subunit
           homolog
 gi|169243053|emb|CAM64081.1| Ribonucleoside-diphosphate reductase, beta subunit [Mycobacterium
           abscessus]
          Length = 313

 Score = 60.6 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 10/118 (8%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           + +       W P  +    D A W+S   LT+ ER    R    F + E  V  +I   
Sbjct: 22  KLFAGGNAKFWDPAGIDFSRDRADWES---LTERERDYATRLCAQFIAGEESVTQDI-QP 77

Query: 104 IYRHLSNPECR----QYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
               +   E R     YL + AFEEA H+  F+  + ++G+ E  L     ++P+   
Sbjct: 78  FMSAMRA-EGRLGDEMYLTQFAFEEAKHTQVFRLWLDAVGVSED-LHGYLDDLPAYRE 133


>gi|304398691|ref|ZP_07380563.1| Ribonucleoside-diphosphate reductase [Pantoea sp. aB]
 gi|304353902|gb|EFM18277.1| Ribonucleoside-diphosphate reductase [Pantoea sp. aB]
          Length = 326

 Score = 60.6 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 53/138 (38%), Gaps = 5/138 (3%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +    +N W+P +VP+ +DL  W++   L   ++ +  R        
Sbjct: 17  NWNRIQDEKDLEVWNRLTSNFWLPEKVPLSNDLPAWQT---LDKQQQQLTIRVFTGLTLL 73

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYR 150
           +++        +      P     L   +F EAVH+ ++  I ++L    D    +    
Sbjct: 74  DTIQNVIGAPGLMDDAITPHEEAVLSNISFMEAVHARSYSSIFSTLCNTQDVDAAYQWSE 133

Query: 151 EVPSITAKANWALQYTQT 168
           E   +  KA   L++ + 
Sbjct: 134 ENVPLQNKARIILEHYRA 151


>gi|227502192|ref|ZP_03932241.1| ribonucleoside-diphosphate reductase [Corynebacterium accolens ATCC
           49725]
 gi|227077016|gb|EEI14979.1| ribonucleoside-diphosphate reductase [Corynebacterium accolens ATCC
           49725]
          Length = 337

 Score = 60.6 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 55/134 (41%), Gaps = 12/134 (8%)

Query: 34  LLPLKYGWAW-----EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGF 88
           L P+ +   W     E +    +N W+P +VP+ +D   W   + +   ER +  R    
Sbjct: 24  LRPVNWNRIWDDKDLEVWNRLTSNFWLPEKVPLSNDRNDW---SCMDPAERDLTIRVFTG 80

Query: 89  FASSESLVAN-NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GEL 145
               +++ A    +  I    +  E   Y    AF +AVH+ ++  I ++L   E   + 
Sbjct: 81  LTLLDTVQATVGEISQIQDARTEHEEAVYTNI-AFMQAVHARSYSSIFSTLASTEEIEKS 139

Query: 146 FNMYREVPSITAKA 159
           +    + P +  +A
Sbjct: 140 YAWAVDNPVLQQRA 153


>gi|163791218|ref|ZP_02185634.1| ribonucleotide-diphosphate [Carnobacterium sp. AT7]
 gi|159873488|gb|EDP67576.1| ribonucleotide-diphosphate [Carnobacterium sp. AT7]
          Length = 320

 Score = 60.6 bits (146), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 57/133 (42%), Gaps = 10/133 (7%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           + N +  +     WEK +      W  T +P+ +DL  W     L   E+ M+ +  G  
Sbjct: 9   NWNNIEDMIDKLTWEKLVEQ---FWTDTRIPVSNDLDDWA---RLPKAEKDMVGKVFGGL 62

Query: 90  ASSESLVANNIVLAIYRHL-SNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELF 146
              ++L + + V A+   + +  E   Y   Q F E++H+ ++  I ++L   ++  E+F
Sbjct: 63  TLLDTLQSQDGVQALKPFIRTQHEEAVYNNIQ-FMESMHAKSYSAIFSTLNSKVEIDEIF 121

Query: 147 NMYREVPSITAKA 159
                   +  KA
Sbjct: 122 QWTNTNDLLQIKA 134


>gi|116333244|ref|YP_794771.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           brevis ATCC 367]
 gi|116098591|gb|ABJ63740.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Lactobacillus brevis ATCC 367]
          Length = 331

 Score = 60.2 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 60/152 (39%), Gaps = 12/152 (7%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W++   L  D + ++    G     ++L + + + 
Sbjct: 24  WEKLTEQ---FWLDTRIPVSNDLDDWRT---LDTDHQWVVGHVFGGLTLLDTLQSQDGMA 77

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           A+ R +  P     L    F E+VH+ ++  I ++L   +   E+F        +  K  
Sbjct: 78  ALRRDIRTPHETAVLNNIQFMESVHAKSYSTIFSTLNTPDEIDEIFQWSDSEEFLQNK-- 135

Query: 161 WALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
              +    L     H   K+  S  L   L +
Sbjct: 136 --TKRIYDLYHDDEHPLKKKISSVFLETFLFY 165


>gi|326632980|ref|YP_004306569.1| putative aerobic ribonucleoside diphosphate reductase small subunit
           [Enterobacteria phage SPC35]
 gi|321272174|gb|ADW80066.1| putative aerobic ribonucleoside diphosphate reductase small subunit
           [Enterobacteria phage SPC35]
          Length = 381

 Score = 60.2 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 50/130 (38%), Gaps = 3/130 (2%)

Query: 20  DDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER 79
           +    L     +   + + +       L   +  W  TE+ ++ D   W     L  + +
Sbjct: 13  NADLFLGDSLGIADYVRVAHPELERLALLQRSQFWTETEISLEADKKQW---GNLPREIQ 69

Query: 80  LMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
            +   NL +   ++S ++     AI   +S PE    L + ++ E +HS  +  II ++ 
Sbjct: 70  EITLLNLAWQTQTDSFISRAPEAAIMPLVSRPELEGMLKQWSYFEDLHSRAYSNIIRNVL 129

Query: 140 LDEGELFNMY 149
            D  E  +  
Sbjct: 130 TDPAEFIDSV 139


>gi|222150734|ref|YP_002559887.1| ribonucleoside-diphosphate reductase minor subunit [Macrococcus
           caseolyticus JCSC5402]
 gi|222119856|dbj|BAH17191.1| ribonucleoside-diphosphate reductase minor subunit [Macrococcus
           caseolyticus JCSC5402]
          Length = 322

 Score = 60.2 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 53/140 (37%), Gaps = 18/140 (12%)

Query: 25  LNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR 84
            N + D+  +           +    +  W+ +E  +  D+A WK    LTDDE+     
Sbjct: 6   WNTQEDMTNMF----------WRQNISQMWVESEFKVSKDIASWKE---LTDDEKFTFNH 52

Query: 85  NLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE 144
            L      ++  A++ +  I  H  +   +         E +H+ ++ +I T+L L   E
Sbjct: 53  ALAGLTGLDTHQADDGMPLIGLHTQDLRKKAVYSFMGMMEQIHAKSYSHIFTTL-LPSAE 111

Query: 145 ----LFNMYREVPSITAKAN 160
               L N     P +  K+ 
Sbjct: 112 TNDLLDNWVVNEPHLKFKSE 131


>gi|284174067|ref|ZP_06388036.1| ribonucleotide-diphosphate reductase subunit beta [Sulfolobus
           solfataricus 98/2]
 gi|261600997|gb|ACX90600.1| ribonucleotide reductase [Sulfolobus solfataricus 98/2]
          Length = 308

 Score = 60.2 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/100 (26%), Positives = 38/100 (38%), Gaps = 11/100 (11%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+K       Y       W P  + +  D   WK    L D E++ I      FA+ E
Sbjct: 25  LFPMK------LYQLGKRLFWDPANIDLSKDAEDWKK---LNDLEKMFIINVGSKFAAGE 75

Query: 94  SLVANNIVLAIYRHLS--NPECRQYLLRQAFEEAVHSHTF 131
             VA ++   I   +     E   YL +  +EE+ H   F
Sbjct: 76  EAVALDLHPLIVTLVKEGKVEEVMYLEQFVYEESKHVEAF 115


>gi|238618784|ref|YP_002913609.1| ribonucleotide-diphosphate reductase subunit beta [Sulfolobus
           islandicus M.16.4]
 gi|238379853|gb|ACR40941.1| ribonucleotide reductase [Sulfolobus islandicus M.16.4]
          Length = 308

 Score = 60.2 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/100 (26%), Positives = 38/100 (38%), Gaps = 11/100 (11%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+K       Y       W P  + +  D   WK    L D E++ I      FA+ E
Sbjct: 25  LFPMK------LYQLGKKLFWDPANIDLSKDAEDWKK---LNDLEKMFIINVGSKFAAGE 75

Query: 94  SLVANNIVLAIYRHLSN--PECRQYLLRQAFEEAVHSHTF 131
             VA ++   I   +     E   YL +  +EE+ H   F
Sbjct: 76  EAVALDLHPLIVTLVKEGRVEEVMYLEQFVYEESKHVEAF 115


>gi|323476430|gb|ADX81668.1| ribonucleotide reductase [Sulfolobus islandicus HVE10/4]
          Length = 308

 Score = 59.9 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/100 (26%), Positives = 38/100 (38%), Gaps = 11/100 (11%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+K       Y       W P  + +  D   WK    L D E++ I      FA+ E
Sbjct: 25  LFPMK------LYQLGKKLFWDPANIDLSKDAEDWKK---LNDLEKMFIINVGSKFAAGE 75

Query: 94  SLVANNIVLAIYRHLSN--PECRQYLLRQAFEEAVHSHTF 131
             VA ++   I   +     E   YL +  +EE+ H   F
Sbjct: 76  EAVALDLHPLIVTLVKEGRVEEVMYLEQFVYEESKHVEAF 115


>gi|304373441|ref|YP_003856650.1| Ribonucleoside-diphosphate reductase beta chai [Mycoplasma
           hyorhinis HUB-1]
 gi|304309632|gb|ADM22112.1| Ribonucleoside-diphosphate reductase beta chai [Mycoplasma
           hyorhinis HUB-1]
 gi|330723642|gb|AEC46012.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma
           hyorhinis MCLD]
          Length = 344

 Score = 59.9 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 55/145 (37%), Gaps = 7/145 (4%)

Query: 25  LNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR 84
            N +        +      E +     N W+P ++P+ +DL  W++   L+   + +I R
Sbjct: 27  FNGKMRSVNWNVINDNKDLEVWNRVVQNFWLPEKIPVSNDLETWRT---LSPTWKRVITR 83

Query: 85  NLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE 144
                   +++ A    +A   +      +      AF   VH+ ++  I ++L   E E
Sbjct: 84  TFTGLTLLDTIQATIGDVAQIPYSQTDHEQVIYANFAFMVGVHARSYGTIFSTLCTSE-E 142

Query: 145 LFNMYR---EVPSITAKANWALQYT 166
           +   +       S+ A+A   + Y 
Sbjct: 143 IEEAHEWVINTKSLQARAQALIPYY 167


>gi|213024643|ref|ZP_03339090.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 119

 Score = 59.9 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 3/85 (3%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 33  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAF 122
            +  +A+   +S PE   ++   AF
Sbjct: 90  RSPNVALLPLISIPELETWVETWAF 114


>gi|163786628|ref|ZP_02181076.1| ribonucleoside-diphosphate reductase , beta subunit 1
           [Flavobacteriales bacterium ALC-1]
 gi|159878488|gb|EDP72544.1| ribonucleoside-diphosphate reductase , beta subunit 1
           [Flavobacteriales bacterium ALC-1]
          Length = 429

 Score = 59.9 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 60/177 (33%), Gaps = 13/177 (7%)

Query: 16  RVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLT 75
           R      R  N       L P +Y    +   +  +++W+ +E     D+  +K++  LT
Sbjct: 97  RDEQARNRKTNIFEKRINLKPYEYPALNDYVDAIRHSYWIHSEFNFTSDIQDFKTR--LT 154

Query: 76  DDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
             E+  IK  +   +  E  V +     IY  +  PE        A  E  H   + +++
Sbjct: 155 VVEQNAIKNTMLAISQIEVAVKSFWGE-IYNKMPKPEIGAVGATFAESEVRHHDAYSHLL 213

Query: 136 TSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             LGL+    F   ++ P I  + ++           +                L F
Sbjct: 214 EILGLNNE--FKHLKKKPVIMKRVHYL--------ETALKNAKSEDNKEYAESILLF 260


>gi|315149360|gb|EFT93376.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecalis TX0012]
          Length = 321

 Score = 59.9 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 50/120 (41%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W++ + L   E+  +    G     +++ + + + 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRTLSNL---EKTTVGYVFGGLTLLDTVQSESGMD 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
            +   +  P     L    F E+VH+ ++  I ++L   +   ++F        +  KA 
Sbjct: 76  QLRNDVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKKEIDDIFEWTNTNKHLQYKAE 135


>gi|118586508|ref|ZP_01543952.1| ribonucleoside-diphosphate reductase 2, beta subunit [Oenococcus
           oeni ATCC BAA-1163]
 gi|118433072|gb|EAV39794.1| ribonucleoside-diphosphate reductase 2, beta subunit [Oenococcus
           oeni ATCC BAA-1163]
          Length = 337

 Score = 59.9 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 50/120 (41%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +D+  W+S   L   E  +     G     ++L + + + 
Sbjct: 28  WEKLTEQ---FWLDTRIPISNDMKDWRS---LGLVEHKLYDHVFGGLTMLDTLQSQDGMA 81

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           ++      P  R  L    F E+VH+ ++  I  +L       E+F+   +   +  KAN
Sbjct: 82  SLLDAAVTPHERAVLNNIKFMESVHAKSYSSIFETLDTPAEIDEIFDWASKNEQLQYKAN 141


>gi|254823272|ref|ZP_05228273.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           intracellulare ATCC 13950]
          Length = 313

 Score = 59.9 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/104 (25%), Positives = 42/104 (40%), Gaps = 9/104 (8%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           + +       W P ++    D   W+    LT+DER    R    F + E  V  +I   
Sbjct: 22  KLFAGGNAKFWNPADIDFSRDREDWE---RLTEDERSYATRLCAEFIAGEESVTQDI-QP 77

Query: 104 IYRHLSNPECR----QYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
               +   E R     YL + AFEEA H   F+  + ++G+ E 
Sbjct: 78  FMAAMRA-EGRLGDEMYLTQFAFEEAKHVQVFRMWLDAVGITED 120


>gi|15899238|ref|NP_343843.1| ribonucleotide-diphosphate reductase subunit beta [Sulfolobus
           solfataricus P2]
 gi|227829337|ref|YP_002831116.1| ribonucleotide-diphosphate reductase subunit beta [Sulfolobus
           islandicus L.S.2.15]
 gi|229578110|ref|YP_002836508.1| ribonucleotide-diphosphate reductase subunit beta [Sulfolobus
           islandicus Y.G.57.14]
 gi|229583322|ref|YP_002841721.1| ribonucleotide-diphosphate reductase subunit beta [Sulfolobus
           islandicus Y.N.15.51]
 gi|284996696|ref|YP_003418463.1| ribonucleotide reductase [Sulfolobus islandicus L.D.8.5]
 gi|13815800|gb|AAK42633.1| Ribonuleotide reductase small subunit, probable (nrdB) [Sulfolobus
           solfataricus P2]
 gi|227455784|gb|ACP34471.1| ribonucleotide reductase [Sulfolobus islandicus L.S.2.15]
 gi|228008824|gb|ACP44586.1| ribonucleotide reductase [Sulfolobus islandicus Y.G.57.14]
 gi|228014038|gb|ACP49799.1| ribonucleotide reductase [Sulfolobus islandicus Y.N.15.51]
 gi|284444591|gb|ADB86093.1| ribonucleotide reductase [Sulfolobus islandicus L.D.8.5]
          Length = 308

 Score = 59.9 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/100 (26%), Positives = 38/100 (38%), Gaps = 11/100 (11%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+K       Y       W P  + +  D   WK    L D E++ I      FA+ E
Sbjct: 25  LFPMK------LYQLGKKLFWDPANIDLSKDAEDWKK---LNDLEKMFIINVGSKFAAGE 75

Query: 94  SLVANNIVLAIYRHLSN--PECRQYLLRQAFEEAVHSHTF 131
             VA ++   I   +     E   YL +  +EE+ H   F
Sbjct: 76  EAVALDLHPLIVTLVKEGRVEEVMYLEQFVYEESKHVEAF 115


>gi|32491358|ref|NP_871612.1| ribonucleotide-diphosphate reductase subunit beta [Wigglesworthia
           glossinidia endosymbiont of Glossina brevipalpis]
 gi|25166565|dbj|BAC24755.1| nrdF [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 324

 Score = 59.9 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 43/106 (40%), Gaps = 3/106 (2%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               ++     E +     N W+P ++P+ +D+  WK    L+ +E+ +  R        
Sbjct: 15  NWNRIEDEKDLEVWNHVTTNFWLPEKIPLSNDIQSWK---MLSKEEKKLTIRIFTGLTLL 71

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
           ++L       +I         +  +    F EAVH+ ++  I ++L
Sbjct: 72  DTLQNIIGAPSIMMDAKTMHEKAVISNIGFMEAVHARSYSSIFSTL 117


>gi|323473782|gb|ADX84388.1| ribonucleotide reductase [Sulfolobus islandicus REY15A]
          Length = 308

 Score = 59.9 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/100 (26%), Positives = 38/100 (38%), Gaps = 11/100 (11%)

Query: 34  LLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSE 93
           L P+K       Y       W P  + +  D   WK    L D E++ I      FA+ E
Sbjct: 25  LFPMK------LYQLGKKLFWDPANIDLSKDAEDWKK---LNDLEKMFIINVGSKFAAGE 75

Query: 94  SLVANNIVLAIYRHLSN--PECRQYLLRQAFEEAVHSHTF 131
             VA ++   I   +     E   YL +  +EE+ H   F
Sbjct: 76  EAVALDLHPLIVTLVKEGRVEEVMYLEQFVYEESKHVEAF 115


>gi|227891214|ref|ZP_04009019.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           salivarius ATCC 11741]
 gi|227867088|gb|EEJ74509.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           salivarius ATCC 11741]
          Length = 326

 Score = 59.9 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 56/120 (46%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL+ W+  N   +D++ ++ +  G     ++L + + + 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLSDWREFN---EDDKDIVGKVFGGLTLLDTLQSQDGMS 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           ++ + +        +    F E+VH+ ++  I ++L   +   E+F+       +  KAN
Sbjct: 76  SLKKDVRTQHEEAVMNNIEFMESVHAKSYSSIFSTLNTPKEIEEIFDWTNSNEILQYKAN 135


>gi|126649263|ref|XP_001388304.1| ribonucleotide reductase small subunit [Cryptosporidium parvum Iowa
           II]
 gi|126117398|gb|EAZ51498.1| ribonucleotide reductase small subunit [Cryptosporidium parvum Iowa
           II]
          Length = 339

 Score = 59.9 bits (144), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 46/154 (29%), Gaps = 13/154 (8%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
              E      ++ +L        L P+KY   W  Y     + W    +   +D      
Sbjct: 4   SKKELLEQQKNESILLDNPFRWVLFPIKYSRLWSLYKKYEVSFWTAEVISPMED-----K 58

Query: 71  KNGLTDDERLM--IKRNLGFFASSES--LVANNIVLAIYRHLSNPECRQYLLRQAFEEAV 126
              +  DE+L+  I+         ++  L    +   +   +  PE R Y       E +
Sbjct: 59  TKLMNMDEKLLDYIEMAFAKRIYIDNTCLDTVLLTCELLGQVQVPEARGYFSFTMCMENI 118

Query: 127 HSHTFQYIITSLGLDEGELFNMYREVPSITAKAN 160
           +   F   +  +  ++ +          +  K  
Sbjct: 119 YKELFMNYVEMIRKNKEK----IERTDEVEKKDE 148


>gi|294155961|ref|YP_003560345.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma
           crocodyli MP145]
 gi|291600208|gb|ADE19704.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma
           crocodyli MP145]
          Length = 340

 Score = 59.5 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 59/150 (39%), Gaps = 7/150 (4%)

Query: 21  DKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL 80
           ++   N +        +      E +     N W+P ++P+ +D+  W++   L+D+ + 
Sbjct: 19  ERNGFNGKMRAVNWNIINDDKDLEVWNRVTQNFWLPEKIPVSNDIPSWRT---LSDEWQT 75

Query: 81  MIKRNLGFFASSESLVANNI-VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
           +I R        +++ A    +  I   L++ E +      AF  AVH+ ++  I ++L 
Sbjct: 76  LITRTFTGLTMLDTIQATVCDIAQIPNALTDHE-QVIYANFAFMVAVHARSYGTIFSTLC 134

Query: 140 LDE--GELFNMYREVPSITAKANWALQYTQ 167
             +   E          +  +A   + Y  
Sbjct: 135 SSDQIEEAHEWVIANEELQERARILIPYYH 164


>gi|331701739|ref|YP_004398698.1| ribonucleoside-diphosphate reductase [Lactobacillus buchneri NRRL
           B-30929]
 gi|329129082|gb|AEB73635.1| Ribonucleoside-diphosphate reductase [Lactobacillus buchneri NRRL
           B-30929]
          Length = 318

 Score = 59.5 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 52/119 (43%), Gaps = 8/119 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL+ W++   L  D + ++    G     ++L +   + 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLSDWRT---LDQDHQWVVGHVFGGLTLLDTLQSQEGMA 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKA 159
           ++ + +        L    F E+VH+ ++  I ++L   +   E+F+       +  KA
Sbjct: 76  SLRKDVQTQHETAVLNNIQFMESVHAKSYSSIFSTLNTPDQIDEIFDWSDSEEFLQNKA 134


>gi|90962208|ref|YP_536124.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           salivarius UCC118]
 gi|301300452|ref|ZP_07206652.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           salivarius ACS-116-V-Col5a]
 gi|90821402|gb|ABE00041.1| Ribonucleoside-diphosphate reductase beta chain [Lactobacillus
           salivarius UCC118]
 gi|300214875|gb|ADJ79291.1| Ribonucleoside-diphosphate reductase beta chain [Lactobacillus
           salivarius CECT 5713]
 gi|300851949|gb|EFK79633.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           salivarius ACS-116-V-Col5a]
          Length = 326

 Score = 59.5 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 56/120 (46%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL+ W+  N   +D++ ++ +  G     ++L + + + 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLSDWREFN---EDDKDVVGKVFGGLTLLDTLQSQDGMS 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           ++ + +        +    F E+VH+ ++  I ++L   +   E+F+       +  KAN
Sbjct: 76  SLKKDVRTQHEEAVMNNIEFMESVHAKSYSSIFSTLNTPKEIEEIFDWTNSNEILQYKAN 135


>gi|213646444|ref|ZP_03376497.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. J185]
          Length = 141

 Score = 59.5 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 32/79 (40%), Gaps = 3/79 (3%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY    +      +  W P EV +  D   ++    L + E+ +   NL +    +S+  
Sbjct: 33  KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEKHIFISNLKYQTLLDSIQG 89

Query: 98  NNIVLAIYRHLSNPECRQY 116
            +  +A+   +S PE   +
Sbjct: 90  RSPNVALLPLISIPELETW 108


>gi|260102934|ref|ZP_05753171.1| ribonucleoside-diphosphate reductase 2 [Lactobacillus helveticus
           DSM 20075]
 gi|111610216|gb|ABH11600.1| ribonucleoside-diphosphate reductase 2 alpha subunit [Lactobacillus
           helveticus CNRZ32]
 gi|260083260|gb|EEW67380.1| ribonucleoside-diphosphate reductase 2 [Lactobacillus helveticus
           DSM 20075]
          Length = 340

 Score = 59.5 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 56/143 (39%), Gaps = 5/143 (3%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
                      +K     E +     N W+P ++P+ +D++ W   N L+DD + +I R 
Sbjct: 24  GKNMRAINWNDIKDDKDLEVWNRVTQNFWLPEKIPVSNDISSW---NQLSDDWQQLITRT 80

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--G 143
                  ++  A+   +A  ++      +      AF  AVH+ ++  I ++L   E   
Sbjct: 81  FTGLTLLDTTQASVGDVAQIKNSQTDIEQAIYANFAFMVAVHARSYGTIFSTLCTSEQIE 140

Query: 144 ELFNMYREVPSITAKANWALQYT 166
           E         ++ A+A   + Y 
Sbjct: 141 EAHEWVVNNDALQARAKAVIPYY 163


>gi|328464295|gb|EGF35725.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           helveticus MTCC 5463]
          Length = 335

 Score = 59.5 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 56/143 (39%), Gaps = 5/143 (3%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
                      +K     E +     N W+P ++P+ +D++ W   N L+DD + +I R 
Sbjct: 19  GKNMRAINWNDIKDDKDLEVWNRVTQNFWLPEKIPVSNDISSW---NQLSDDWQQLITRT 75

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--G 143
                  ++  A+   +A  ++      +      AF  AVH+ ++  I ++L   E   
Sbjct: 76  FTGLTLLDTTQASVGDVAQIKNSQTDIEQAIYANFAFMVAVHARSYGTIFSTLCTSEQIE 135

Query: 144 ELFNMYREVPSITAKANWALQYT 166
           E         ++ A+A   + Y 
Sbjct: 136 EAHEWVVNNDALQARAKAVIPYY 158


>gi|161508077|ref|YP_001578044.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           helveticus DPC 4571]
 gi|160349066|gb|ABX27740.1| ribonucleoside-diphosphate reductase [Lactobacillus helveticus DPC
           4571]
          Length = 340

 Score = 59.5 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 56/143 (39%), Gaps = 5/143 (3%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
                      +K     E +     N W+P ++P+ +D++ W   N L+DD + +I R 
Sbjct: 24  GKNMRAINWNDIKDDKDLEVWNRVTQNFWLPEKIPVSNDISSW---NQLSDDWQQLITRT 80

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--G 143
                  ++  A+   +A  ++      +      AF  AVH+ ++  I ++L   E   
Sbjct: 81  FTGLTLLDTTQASVGDVAQIKNSQTDIEQAIYANFAFMVAVHARSYGTIFSTLCTSEQIE 140

Query: 144 ELFNMYREVPSITAKANWALQYT 166
           E         ++ A+A   + Y 
Sbjct: 141 EAHEWVVNNDALQARAKAVIPYY 163


>gi|293556439|ref|ZP_06675017.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1039]
 gi|291601403|gb|EFF31677.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1039]
          Length = 316

 Score = 59.5 bits (143), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/117 (25%), Positives = 59/117 (50%), Gaps = 5/117 (4%)

Query: 46  YLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIY 105
           +  A    W+ T VP+ +DL  WK+   L+D E+ ++K+ +G  A  ++L +   + A+ 
Sbjct: 20  WDKATAQFWLDTRVPVSNDLLDWKN---LSDVEKKVVKKAVGGLALLDTLQSEEGLYALK 76

Query: 106 RHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSITAKAN 160
           ++    + +  L    F E++H+ T+  I+ SL    D  E+++     P +  KA 
Sbjct: 77  KNARTQKEKAVLSDFTFMESIHAKTYGTILISLNTFKDIEEIYDWMNNDPKMQFKAE 133


>gi|222478371|gb|ACM62263.1| ribonucleotide reductase subunit 2 [Human herpesvirus 1]
          Length = 340

 Score = 59.1 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 8/126 (6%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                    +  N W+ TE+     +   +  + L++ E    +    F ++++ LV  N
Sbjct: 44  PDINHLRSLSILNRWLETELVF---VGDEEDVSKLSEGELSFYRFLFAFLSAADDLVTEN 100

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD----EGELFNMYREVPSI 155
           +   +       +   Y + Q   E VHS  +  I   L  +      E        P+I
Sbjct: 101 LG-GLSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARREYVAGTINHPAI 159

Query: 156 TAKANW 161
            AK +W
Sbjct: 160 RAKVDW 165


>gi|290766061|gb|ADD60039.1| ribonucleotide reductase subunit 2 [Human herpesvirus 1]
          Length = 340

 Score = 59.1 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 8/126 (6%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                    +  N W+ TE+     +   +  + L++ E    +    F ++++ LV  N
Sbjct: 44  PDINHLRSLSILNRWLETELVF---VGDEEDVSKLSEGELSFYRFLFAFLSAADDLVTEN 100

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD----EGELFNMYREVPSI 155
           +   +       +   Y + Q   E VHS  +  I   L  +      E        P+I
Sbjct: 101 LG-GLSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARREYVAGTINHPAI 159

Query: 156 TAKANW 161
            AK +W
Sbjct: 160 RAKVDW 165


>gi|255018022|ref|ZP_05290148.1| ribonucleotide-diphosphate reductase subunit beta [Listeria
           monocytogenes FSL F2-515]
          Length = 267

 Score = 59.1 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 46/112 (41%), Gaps = 4/112 (3%)

Query: 85  NLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDE 142
            +G  A+ +S     I   I  ++++P         A +E +H+ ++ Y++ S+    ++
Sbjct: 2   IIGLLATLDSPQTRFIY-NIAEYITDPAVHANAAIIAQQEVIHNESYSYVLASITNLQEQ 60

Query: 143 GELFNMYREVPSITAKANWALQ-YTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
             +F + R  P+I  +    +  Y   +++ +     K      +   + F 
Sbjct: 61  NRVFELARTHPTIIKRNEPIMDAYDDFMNNKTGETLVKALIQSSILEGINFY 112


>gi|58700135|ref|ZP_00374651.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila ananassae]
 gi|58533347|gb|EAL57830.1| ribonucleoside-diphosphate reductase, beta subunit [Wolbachia
           endosymbiont of Drosophila ananassae]
          Length = 225

 Score = 59.1 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 28/61 (45%), Gaps = 1/61 (1%)

Query: 115 QYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSF 174
             L   +  E +H   + Y++ ++G+ E E +  + +  ++  K  + L++ ++      
Sbjct: 1   MMLASFSNMETIHIAAYSYLLDTIGMPESE-YQAFLKYDAMRKKYEYMLEFEESKKHDKK 59

Query: 175 H 175
           H
Sbjct: 60  H 60


>gi|114318828|gb|ABI63502.1| UL40 [Human herpesvirus 1]
 gi|290766139|gb|ADD60116.1| ribonucleotide reductase subunit 2 [Human herpesvirus 1]
          Length = 340

 Score = 59.1 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 8/126 (6%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                    +  N W+ TE+     +   +  + L++ E    +    F ++++ LV  N
Sbjct: 44  PDINHLRSLSILNRWLETELVF---VGDEEDVSKLSEGELSFYRFLFAFLSAADDLVTEN 100

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD----EGELFNMYREVPSI 155
           +   +       +   Y + Q   E VHS  +  I   L  +      E        P+I
Sbjct: 101 LG-GLSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARREYVAGTINHPAI 159

Query: 156 TAKANW 161
            AK +W
Sbjct: 160 RAKVDW 165


>gi|241895721|ref|ZP_04783017.1| ribonucleotide-diphosphate reductase subunit beta [Weissella
           paramesenteroides ATCC 33313]
 gi|241871088|gb|EER74839.1| ribonucleotide-diphosphate reductase subunit beta [Weissella
           paramesenteroides ATCC 33313]
          Length = 318

 Score = 59.1 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 50/120 (41%), Gaps = 8/120 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    +T+ E  ++    G     ++L + + + 
Sbjct: 22  WEKLTEQ---FWLDTRIPLSNDLDDWRK---MTEQEHYLVGHVFGGLTLLDTLQSQDGMA 75

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
           ++ +          L    F E+VH+ ++  I  +L       E+F+       +  KAN
Sbjct: 76  SLKQATRTQHELAVLNNIEFMESVHAKSYSSIFETLHTPAEIDEIFDWTNSNEFLQYKAN 135


>gi|281181724|dbj|BAI58041.1| putative ribonucleoside-diphosphate reductase [Edwardsiella tarda]
          Length = 169

 Score = 59.1 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 36/83 (43%)

Query: 87  GFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELF 146
            +    +S+   +  +A+   +S PE   ++   +F E +HS ++ +II ++  D   +F
Sbjct: 2   RYQTLLDSIQGRSPNVALLPLISIPELETWVETWSFSETIHSRSYTHIIRNIVTDPSLVF 61

Query: 147 NMYREVPSITAKANWALQYTQTL 169
           +       I  +A     Y   L
Sbjct: 62  DDIVSNEEILKRARDISAYYDDL 84


>gi|9629421|ref|NP_044642.1| ribonucleotide reductase subunit 2 [Human herpesvirus 1]
 gi|132622|sp|P10224|RIR2_HHV11 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           Short=R2; AltName: Full=Ribonucleotide reductase 38 kDa
           subunit; AltName: Full=Ribonucleotide reductase small
           subunit; Flags: Precursor
 gi|59540|emb|CAA32303.1| ribonucleotide reductase small subunit [Human herpesvirus 1]
          Length = 340

 Score = 59.1 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 8/126 (6%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                    +  N W+ TE+     +   +  + L++ E    +    F ++++ LV  N
Sbjct: 44  PDINHLRSLSILNRWLETELVF---VGDEEDVSKLSEGELSFYRFLFAFLSAADDLVTEN 100

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD----EGELFNMYREVPSI 155
           +   +       +   Y + Q   E VHS  +  I   L  +      E        P+I
Sbjct: 101 LG-GLSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARREYVAGTINHPAI 159

Query: 156 TAKANW 161
            AK +W
Sbjct: 160 RAKVDW 165


>gi|38234491|ref|NP_940258.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           diphtheriae NCTC 13129]
 gi|38200754|emb|CAE50457.1| ribonucleoside-diphosphate reductase beta chain 2 [Corynebacterium
           diphtheriae]
          Length = 341

 Score = 59.1 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 47/111 (42%), Gaps = 14/111 (12%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA-----N 98
           E +     N W+P +VP+ +DL  W++   +T   R ++ R        ++L A     +
Sbjct: 36  EVWQRLTANFWLPEKVPLSNDLPTWRT---MTPVYRELVTRTFTGLTLLDTLQASVGEIS 92

Query: 99  NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY 149
            I  A   H             AF +AVH+ ++  + +++     E+ + Y
Sbjct: 93  QIPDAHTEHEQAVYANI-----AFMQAVHARSYSSVFSTMCS-STEIDDAY 137


>gi|9629310|ref|NP_044510.1| ribonucleotide reductase subunit 2 [Human herpesvirus 2]
 gi|61231410|sp|P69520|RIR2_HHV23 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase 38 kDa subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|61231418|sp|P69521|RIR2_HHV2H RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           Short=R2; AltName: Full=Ribonucleotide reductase 38 kDa
           subunit; AltName: Full=Ribonucleotide reductase small
           subunit
 gi|330200|gb|AAA45807.1| 38K protein [Human herpesvirus 2]
 gi|1869863|emb|CAB06726.1| ribonucleotide reductase small subunit [Human herpesvirus 2]
 gi|224613173|dbj|BAH24264.1| ribonucleotide reductase small subunit [Human herpesvirus 2]
 gi|224613175|dbj|BAH24265.1| ribonucleotide reductase small subunit [Human herpesvirus 2]
          Length = 337

 Score = 59.1 bits (142), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 47/126 (37%), Gaps = 8/126 (6%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                    +  N W+ TE+     +   +  + L++ E    +    F ++++ LV  N
Sbjct: 41  PDINHLRSLSILNRWLETELVF---VGDEEDVSKLSEGELGFYRFLFAFLSAADDLVTEN 97

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY--REV--PSI 155
           +   +       +   Y + Q   E VHS  +  I   L  +  +    Y  R +  P+I
Sbjct: 98  LG-GLSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARRAYVARTINHPAI 156

Query: 156 TAKANW 161
             K +W
Sbjct: 157 RVKVDW 162


>gi|30960705|gb|AAP39142.1| UL40 [Human herpesvirus 1]
 gi|30960777|gb|AAP39190.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score = 58.7 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 8/126 (6%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                    +  N W+ TE+     +   +  + L++ E    +    F ++++ LV  N
Sbjct: 11  PDINHLRSLSILNRWLETELVF---VGDEEDVSKLSEGELSFYRFLFAFLSAADDLVTEN 67

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD----EGELFNMYREVPSI 155
           +   +       +   Y + Q   E VHS  +  I   L  +      E        P+I
Sbjct: 68  LG-GLSGLFEQKDIIHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARREYVAGTINHPAI 126

Query: 156 TAKANW 161
            AK +W
Sbjct: 127 RAKVDW 132


>gi|256844583|ref|ZP_05550068.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           crispatus 125-2-CHN]
 gi|256613124|gb|EEU18328.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           crispatus 125-2-CHN]
          Length = 276

 Score = 58.7 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 56/143 (39%), Gaps = 5/143 (3%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
                      +K     E +     N W+P ++P+ +D++ W   N L+DD + +I R 
Sbjct: 25  GKNMRAINWNDIKDEKDLEVWNRVTQNFWLPEKIPVSNDISSW---NQLSDDWQQLITRT 81

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--G 143
                  ++  ++   +A  ++      +      AF  AVH+ ++  I ++L   E   
Sbjct: 82  FTGLTLLDTTQSSVGDVAQIKNSQTDIEQAIYANFAFMVAVHARSYGTIFSTLCTSEQIE 141

Query: 144 ELFNMYREVPSITAKANWALQYT 166
           E         ++ A+A   + Y 
Sbjct: 142 EAHEWVVNNDALQARAKAVIPYY 164


>gi|218291056|ref|ZP_03495088.1| ribonucleotide reductase [Alicyclobacillus acidocaldarius LAA1]
 gi|218239010|gb|EED06216.1| ribonucleotide reductase [Alicyclobacillus acidocaldarius LAA1]
          Length = 317

 Score = 58.7 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 12/108 (11%)

Query: 32  NQLLPLK-YGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
           + +LP++ Y  A +  +      W P ++    D   WK    + + ER +I R    F 
Sbjct: 20  HNILPMRLYHKAKKLGV------WDPRDIDFSKDKEDWK---AMNEAERRVILRLCSLFV 70

Query: 91  SSESLVANNIVLAIYRHLSN--PECRQYLLRQAFEEAVHSHTFQYIIT 136
           + E  V  +++  I         E   YL    FEEA H+  F+  + 
Sbjct: 71  AGEEAVTLDLLPLIMAVAREGRLEEEMYLTTFLFEEAKHTEVFRRFLD 118


>gi|238852996|ref|ZP_04643394.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           gasseri 202-4]
 gi|282851729|ref|ZP_06261093.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           gasseri 224-1]
 gi|238834391|gb|EEQ26630.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           gasseri 202-4]
 gi|282557132|gb|EFB62730.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           gasseri 224-1]
          Length = 335

 Score = 58.7 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 56/143 (39%), Gaps = 5/143 (3%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
                      +K     E +     N W+P ++P+ +D++ W   N L+DD + +I R 
Sbjct: 19  GKNMRAINWNDIKDDKDLEVWNRVTQNFWLPEKIPVSNDISSW---NQLSDDWQQLITRT 75

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--G 143
                  ++  ++   +A  ++      +      AF  AVH+ ++  I ++L   E   
Sbjct: 76  FTGLTLLDTTQSSVGDVAQIKNSQTDIEQAIYANFAFMVAVHARSYGTIFSTLCTSEQIE 135

Query: 144 ELFNMYREVPSITAKANWALQYT 166
           E         ++ A+A   + Y 
Sbjct: 136 EAHEWVVNNDALQARAKAVIPYY 158


>gi|323467364|gb|ADX71051.1| Ribonucleoside-diphosphate reductase 2 alpha subunit [Lactobacillus
           helveticus H10]
          Length = 340

 Score = 58.7 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 56/143 (39%), Gaps = 5/143 (3%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
                      +K     E +     N W+P ++P+ +D++ W   N L+DD + +I R 
Sbjct: 24  GKNMRAINWNDIKDDKDLEVWNRVTQNFWLPEKIPVSNDISSW---NQLSDDWQQLITRT 80

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--G 143
                  ++  ++   +A  ++      +      AF  AVH+ ++  I ++L   E   
Sbjct: 81  FTGLTLLDTTQSSVGDVAQIKNSQTDIEQAIYANFAFMVAVHARSYGTIFSTLCTSEQIE 140

Query: 144 ELFNMYREVPSITAKANWALQYT 166
           E         ++ A+A   + Y 
Sbjct: 141 EAHEWVVNNDALQARAKAVIPYY 163


>gi|30960708|gb|AAP39144.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score = 58.7 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 8/126 (6%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                    +  N W+ TE+     +   +  + L++ E    +    F ++++ LV  N
Sbjct: 11  PDINHLRSLSIINRWLETELVF---VGDEEDVSKLSEGELSFYRFLFAFLSAADDLVTEN 67

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD----EGELFNMYREVPSI 155
           +   +       +   Y + Q   E VHS  +  I   L  +      E        P+I
Sbjct: 68  LG-GLSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARREYVAGTINHPAI 126

Query: 156 TAKANW 161
            AK +W
Sbjct: 127 RAKVDW 132


>gi|59912|emb|CAA24930.1| unnamed protein product [Human herpesvirus 2]
          Length = 337

 Score = 58.7 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 47/126 (37%), Gaps = 8/126 (6%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                    +  N W+ TE+     +   +  + L++ E    +    F ++++ LV  N
Sbjct: 41  PDINHLRSLSILNRWLETELVF---VGDEEDVSKLSEGELGFYRFLFAFLSAADDLVTEN 97

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY--REV--PSI 155
           +   +       +   Y + Q   E VHS  +  I   L  +  +    Y  R +  P+I
Sbjct: 98  LG-GLSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARRAYVARTINHPAI 156

Query: 156 TAKANW 161
             K +W
Sbjct: 157 RVKVDW 162


>gi|312984313|ref|ZP_07791656.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           crispatus CTV-05]
 gi|310894278|gb|EFQ43357.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           crispatus CTV-05]
          Length = 335

 Score = 58.7 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 56/143 (39%), Gaps = 5/143 (3%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
                      +K     E +     N W+P ++P+ +D++ W   N L+DD + +I R 
Sbjct: 19  GKNMRAINWNDIKDDKDLEVWNRVTQNFWLPEKIPVSNDISSW---NQLSDDWQQLITRT 75

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--G 143
                  ++  ++   +A  ++      +      AF  AVH+ ++  I ++L   E   
Sbjct: 76  FTGLTLLDTTQSSVGDVAQIKNSQTDIEQAIYANFAFMVAVHARSYGTIFSTLCTSEQIE 135

Query: 144 ELFNMYREVPSITAKANWALQYT 166
           E         ++ A+A   + Y 
Sbjct: 136 EAHEWVVNNDALQARAKAVIPYY 158


>gi|300362830|ref|ZP_07059004.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           gasseri JV-V03]
 gi|300353120|gb|EFJ68994.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           gasseri JV-V03]
          Length = 340

 Score = 58.7 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 56/143 (39%), Gaps = 5/143 (3%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
                      +K     E +     N W+P ++P+ +D++ W   N L+DD + +I R 
Sbjct: 24  GKNMRAINWNDIKDDKDLEVWNRVTQNFWLPEKIPVSNDISSW---NQLSDDWQQLITRT 80

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--G 143
                  ++  ++   +A  ++      +      AF  AVH+ ++  I ++L   E   
Sbjct: 81  FTGLTLLDTTQSSVGDVAQIKNSQTDIEQAIYANFAFMVAVHARSYGTIFSTLCTSEQIE 140

Query: 144 ELFNMYREVPSITAKANWALQYT 166
           E         ++ A+A   + Y 
Sbjct: 141 EAHEWVVNNDALQARAKAVIPYY 163


>gi|30960492|gb|AAP39000.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score = 58.7 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 8/126 (6%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                    +  N W+ TE+     +   +  + L++ E    +    F ++++ LV  N
Sbjct: 11  PDINHLRSLSILNRWLETELVF---VGDEEDVSKLSEGELSFYRFLFAFLSAADDLVTEN 67

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD----EGELFNMYREVPSI 155
           +   +       +   Y + Q   E VHS  +  I   L  +      E        P+I
Sbjct: 68  LG-GLSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARREYVAGTINHPAI 126

Query: 156 TAKANW 161
            AK +W
Sbjct: 127 RAKVDW 132


>gi|30960429|gb|AAP38958.1| UL40 [Human herpesvirus 1]
 gi|30960468|gb|AAP38984.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score = 58.7 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 8/126 (6%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                    +  N W+ TE+     +   +  + L++ E    +    F ++++ LV  N
Sbjct: 11  PDINHLRSLSILNRWLETELVF---VGDEEDVSKLSEGELSFYRFLFAFLSAADDLVTEN 67

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD----EGELFNMYREVPSI 155
           +   +       +   Y + Q   E VHS  +  I   L  +      E        P+I
Sbjct: 68  LG-GLSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARREYVAGTINHPAI 126

Query: 156 TAKANW 161
            AK +W
Sbjct: 127 RAKVDW 132


>gi|30960231|gb|AAP38826.1| UL40 [Human herpesvirus 1]
 gi|30960234|gb|AAP38828.1| UL40 [Human herpesvirus 1]
 gi|30960237|gb|AAP38830.1| UL40 [Human herpesvirus 1]
 gi|30960240|gb|AAP38832.1| UL40 [Human herpesvirus 1]
 gi|30960243|gb|AAP38834.1| UL40 [Human herpesvirus 1]
 gi|30960246|gb|AAP38836.1| UL40 [Human herpesvirus 1]
 gi|30960249|gb|AAP38838.1| UL40 [Human herpesvirus 1]
 gi|30960252|gb|AAP38840.1| UL40 [Human herpesvirus 1]
 gi|30960255|gb|AAP38842.1| UL40 [Human herpesvirus 1]
 gi|30960258|gb|AAP38844.1| UL40 [Human herpesvirus 1]
 gi|30960261|gb|AAP38846.1| UL40 [Human herpesvirus 1]
 gi|30960264|gb|AAP38848.1| UL40 [Human herpesvirus 1]
 gi|30960267|gb|AAP38850.1| UL40 [Human herpesvirus 1]
 gi|30960270|gb|AAP38852.1| UL40 [Human herpesvirus 1]
 gi|30960273|gb|AAP38854.1| UL40 [Human herpesvirus 1]
 gi|30960276|gb|AAP38856.1| UL40 [Human herpesvirus 1]
 gi|30960279|gb|AAP38858.1| UL40 [Human herpesvirus 1]
 gi|30960282|gb|AAP38860.1| UL40 [Human herpesvirus 1]
 gi|30960285|gb|AAP38862.1| UL40 [Human herpesvirus 1]
 gi|30960288|gb|AAP38864.1| UL40 [Human herpesvirus 1]
 gi|30960291|gb|AAP38866.1| UL40 [Human herpesvirus 1]
 gi|30960294|gb|AAP38868.1| UL40 [Human herpesvirus 1]
 gi|30960297|gb|AAP38870.1| UL40 [Human herpesvirus 1]
 gi|30960300|gb|AAP38872.1| UL40 [Human herpesvirus 1]
 gi|30960303|gb|AAP38874.1| UL40 [Human herpesvirus 1]
 gi|30960306|gb|AAP38876.1| UL40 [Human herpesvirus 1]
 gi|30960309|gb|AAP38878.1| UL40 [Human herpesvirus 1]
 gi|30960312|gb|AAP38880.1| UL40 [Human herpesvirus 1]
 gi|30960315|gb|AAP38882.1| UL40 [Human herpesvirus 1]
 gi|30960318|gb|AAP38884.1| UL40 [Human herpesvirus 1]
 gi|30960321|gb|AAP38886.1| UL40 [Human herpesvirus 1]
 gi|30960324|gb|AAP38888.1| UL40 [Human herpesvirus 1]
 gi|30960327|gb|AAP38890.1| UL40 [Human herpesvirus 1]
 gi|30960330|gb|AAP38892.1| UL40 [Human herpesvirus 1]
 gi|30960333|gb|AAP38894.1| UL40 [Human herpesvirus 1]
 gi|30960336|gb|AAP38896.1| UL40 [Human herpesvirus 1]
 gi|30960339|gb|AAP38898.1| UL40 [Human herpesvirus 1]
 gi|30960342|gb|AAP38900.1| UL40 [Human herpesvirus 1]
 gi|30960345|gb|AAP38902.1| UL40 [Human herpesvirus 1]
 gi|30960348|gb|AAP38904.1| UL40 [Human herpesvirus 1]
 gi|30960351|gb|AAP38906.1| UL40 [Human herpesvirus 1]
 gi|30960354|gb|AAP38908.1| UL40 [Human herpesvirus 1]
 gi|30960357|gb|AAP38910.1| UL40 [Human herpesvirus 1]
 gi|30960360|gb|AAP38912.1| UL40 [Human herpesvirus 1]
 gi|30960363|gb|AAP38914.1| UL40 [Human herpesvirus 1]
 gi|30960366|gb|AAP38916.1| UL40 [Human herpesvirus 1]
 gi|30960369|gb|AAP38918.1| UL40 [Human herpesvirus 1]
 gi|30960372|gb|AAP38920.1| UL40 [Human herpesvirus 1]
 gi|30960375|gb|AAP38922.1| UL40 [Human herpesvirus 1]
 gi|30960378|gb|AAP38924.1| UL40 [Human herpesvirus 1]
 gi|30960381|gb|AAP38926.1| UL40 [Human herpesvirus 1]
 gi|30960384|gb|AAP38928.1| UL40 [Human herpesvirus 1]
 gi|30960387|gb|AAP38930.1| UL40 [Human herpesvirus 1]
 gi|30960390|gb|AAP38932.1| UL40 [Human herpesvirus 1]
 gi|30960393|gb|AAP38934.1| UL40 [Human herpesvirus 1]
 gi|30960396|gb|AAP38936.1| UL40 [Human herpesvirus 1]
 gi|30960399|gb|AAP38938.1| UL40 [Human herpesvirus 1]
 gi|30960402|gb|AAP38940.1| UL40 [Human herpesvirus 1]
 gi|30960405|gb|AAP38942.1| UL40 [Human herpesvirus 1]
 gi|30960408|gb|AAP38944.1| UL40 [Human herpesvirus 1]
 gi|30960411|gb|AAP38946.1| UL40 [Human herpesvirus 1]
 gi|30960414|gb|AAP38948.1| UL40 [Human herpesvirus 1]
 gi|30960417|gb|AAP38950.1| UL40 [Human herpesvirus 1]
 gi|30960432|gb|AAP38960.1| UL40 [Human herpesvirus 1]
 gi|30960435|gb|AAP38962.1| UL40 [Human herpesvirus 1]
 gi|30960438|gb|AAP38964.1| UL40 [Human herpesvirus 1]
 gi|30960441|gb|AAP38966.1| UL40 [Human herpesvirus 1]
 gi|30960444|gb|AAP38968.1| UL40 [Human herpesvirus 1]
 gi|30960447|gb|AAP38970.1| UL40 [Human herpesvirus 1]
 gi|30960450|gb|AAP38972.1| UL40 [Human herpesvirus 1]
 gi|30960453|gb|AAP38974.1| UL40 [Human herpesvirus 1]
 gi|30960456|gb|AAP38976.1| UL40 [Human herpesvirus 1]
 gi|30960459|gb|AAP38978.1| UL40 [Human herpesvirus 1]
 gi|30960462|gb|AAP38980.1| UL40 [Human herpesvirus 1]
 gi|30960471|gb|AAP38986.1| UL40 [Human herpesvirus 1]
 gi|30960474|gb|AAP38988.1| UL40 [Human herpesvirus 1]
 gi|30960477|gb|AAP38990.1| UL40 [Human herpesvirus 1]
 gi|30960480|gb|AAP38992.1| UL40 [Human herpesvirus 1]
 gi|30960483|gb|AAP38994.1| UL40 [Human herpesvirus 1]
 gi|30960486|gb|AAP38996.1| UL40 [Human herpesvirus 1]
 gi|30960489|gb|AAP38998.1| UL40 [Human herpesvirus 1]
 gi|30960495|gb|AAP39002.1| UL40 [Human herpesvirus 1]
 gi|30960498|gb|AAP39004.1| UL40 [Human herpesvirus 1]
 gi|30960501|gb|AAP39006.1| UL40 [Human herpesvirus 1]
 gi|30960504|gb|AAP39008.1| UL40 [Human herpesvirus 1]
 gi|30960507|gb|AAP39010.1| UL40 [Human herpesvirus 1]
 gi|30960510|gb|AAP39012.1| UL40 [Human herpesvirus 1]
 gi|30960513|gb|AAP39014.1| UL40 [Human herpesvirus 1]
 gi|30960516|gb|AAP39016.1| UL40 [Human herpesvirus 1]
 gi|30960519|gb|AAP39018.1| UL40 [Human herpesvirus 1]
 gi|30960522|gb|AAP39020.1| UL40 [Human herpesvirus 1]
 gi|30960528|gb|AAP39024.1| UL40 [Human herpesvirus 1]
 gi|30960531|gb|AAP39026.1| UL40 [Human herpesvirus 1]
 gi|30960534|gb|AAP39028.1| UL40 [Human herpesvirus 1]
 gi|30960537|gb|AAP39030.1| UL40 [Human herpesvirus 1]
 gi|30960540|gb|AAP39032.1| UL40 [Human herpesvirus 1]
 gi|30960543|gb|AAP39034.1| UL40 [Human herpesvirus 1]
 gi|30960546|gb|AAP39036.1| UL40 [Human herpesvirus 1]
 gi|30960549|gb|AAP39038.1| UL40 [Human herpesvirus 1]
 gi|30960552|gb|AAP39040.1| UL40 [Human herpesvirus 1]
 gi|30960555|gb|AAP39042.1| UL40 [Human herpesvirus 1]
 gi|30960558|gb|AAP39044.1| UL40 [Human herpesvirus 1]
 gi|30960561|gb|AAP39046.1| UL40 [Human herpesvirus 1]
 gi|30960564|gb|AAP39048.1| UL40 [Human herpesvirus 1]
 gi|30960567|gb|AAP39050.1| UL40 [Human herpesvirus 1]
 gi|30960570|gb|AAP39052.1| UL40 [Human herpesvirus 1]
 gi|30960573|gb|AAP39054.1| UL40 [Human herpesvirus 1]
 gi|30960576|gb|AAP39056.1| UL40 [Human herpesvirus 1]
 gi|30960579|gb|AAP39058.1| UL40 [Human herpesvirus 1]
 gi|30960582|gb|AAP39060.1| UL40 [Human herpesvirus 1]
 gi|30960585|gb|AAP39062.1| UL40 [Human herpesvirus 1]
 gi|30960588|gb|AAP39064.1| UL40 [Human herpesvirus 1]
 gi|30960591|gb|AAP39066.1| UL40 [Human herpesvirus 1]
 gi|30960594|gb|AAP39068.1| UL40 [Human herpesvirus 1]
 gi|30960597|gb|AAP39070.1| UL40 [Human herpesvirus 1]
 gi|30960600|gb|AAP39072.1| UL40 [Human herpesvirus 1]
 gi|30960603|gb|AAP39074.1| UL40 [Human herpesvirus 1]
 gi|30960606|gb|AAP39076.1| UL40 [Human herpesvirus 1]
 gi|30960609|gb|AAP39078.1| UL40 [Human herpesvirus 1]
 gi|30960612|gb|AAP39080.1| UL40 [Human herpesvirus 1]
 gi|30960615|gb|AAP39082.1| UL40 [Human herpesvirus 1]
 gi|30960618|gb|AAP39084.1| UL40 [Human herpesvirus 1]
 gi|30960621|gb|AAP39086.1| UL40 [Human herpesvirus 1]
 gi|30960624|gb|AAP39088.1| UL40 [Human herpesvirus 1]
 gi|30960627|gb|AAP39090.1| UL40 [Human herpesvirus 1]
 gi|30960630|gb|AAP39092.1| UL40 [Human herpesvirus 1]
 gi|30960633|gb|AAP39094.1| UL40 [Human herpesvirus 1]
 gi|30960636|gb|AAP39096.1| UL40 [Human herpesvirus 1]
 gi|30960639|gb|AAP39098.1| UL40 [Human herpesvirus 1]
 gi|30960642|gb|AAP39100.1| UL40 [Human herpesvirus 1]
 gi|30960645|gb|AAP39102.1| UL40 [Human herpesvirus 1]
 gi|30960648|gb|AAP39104.1| UL40 [Human herpesvirus 1]
 gi|30960651|gb|AAP39106.1| UL40 [Human herpesvirus 1]
 gi|30960657|gb|AAP39110.1| UL40 [Human herpesvirus 1]
 gi|30960660|gb|AAP39112.1| UL40 [Human herpesvirus 1]
 gi|30960663|gb|AAP39114.1| UL40 [Human herpesvirus 1]
 gi|30960666|gb|AAP39116.1| UL40 [Human herpesvirus 1]
 gi|30960669|gb|AAP39118.1| UL40 [Human herpesvirus 1]
 gi|30960672|gb|AAP39120.1| UL40 [Human herpesvirus 1]
 gi|30960675|gb|AAP39122.1| UL40 [Human herpesvirus 1]
 gi|30960678|gb|AAP39124.1| UL40 [Human herpesvirus 1]
 gi|30960681|gb|AAP39126.1| UL40 [Human herpesvirus 1]
 gi|30960684|gb|AAP39128.1| UL40 [Human herpesvirus 1]
 gi|30960687|gb|AAP39130.1| UL40 [Human herpesvirus 1]
 gi|30960690|gb|AAP39132.1| UL40 [Human herpesvirus 1]
 gi|30960693|gb|AAP39134.1| UL40 [Human herpesvirus 1]
 gi|30960696|gb|AAP39136.1| UL40 [Human herpesvirus 1]
 gi|30960699|gb|AAP39138.1| UL40 [Human herpesvirus 1]
 gi|30960702|gb|AAP39140.1| UL40 [Human herpesvirus 1]
 gi|30960711|gb|AAP39146.1| UL40 [Human herpesvirus 1]
 gi|30960714|gb|AAP39148.1| UL40 [Human herpesvirus 1]
 gi|30960717|gb|AAP39150.1| UL40 [Human herpesvirus 1]
 gi|30960720|gb|AAP39152.1| UL40 [Human herpesvirus 1]
 gi|30960723|gb|AAP39154.1| UL40 [Human herpesvirus 1]
 gi|30960726|gb|AAP39156.1| UL40 [Human herpesvirus 1]
 gi|30960732|gb|AAP39160.1| UL40 [Human herpesvirus 1]
 gi|30960735|gb|AAP39162.1| UL40 [Human herpesvirus 1]
 gi|30960738|gb|AAP39164.1| UL40 [Human herpesvirus 1]
 gi|30960741|gb|AAP39166.1| UL40 [Human herpesvirus 1]
 gi|30960744|gb|AAP39168.1| UL40 [Human herpesvirus 1]
 gi|30960747|gb|AAP39170.1| UL40 [Human herpesvirus 1]
 gi|30960750|gb|AAP39172.1| UL40 [Human herpesvirus 1]
 gi|30960756|gb|AAP39176.1| UL40 [Human herpesvirus 1]
 gi|30960759|gb|AAP39178.1| UL40 [Human herpesvirus 1]
 gi|30960762|gb|AAP39180.1| UL40 [Human herpesvirus 1]
 gi|30960765|gb|AAP39182.1| UL40 [Human herpesvirus 1]
 gi|30960768|gb|AAP39184.1| UL40 [Human herpesvirus 1]
 gi|30960771|gb|AAP39186.1| UL40 [Human herpesvirus 1]
 gi|30960774|gb|AAP39188.1| UL40 [Human herpesvirus 1]
 gi|30960780|gb|AAP39192.1| UL40 [Human herpesvirus 1]
 gi|30960783|gb|AAP39194.1| UL40 [Human herpesvirus 1]
 gi|30960786|gb|AAP39196.1| UL40 [Human herpesvirus 1]
 gi|30960789|gb|AAP39198.1| UL40 [Human herpesvirus 1]
 gi|30960792|gb|AAP39200.1| UL40 [Human herpesvirus 1]
 gi|30960795|gb|AAP39202.1| UL40 [Human herpesvirus 1]
 gi|30960798|gb|AAP39204.1| UL40 [Human herpesvirus 1]
 gi|30960801|gb|AAP39206.1| UL40 [Human herpesvirus 1]
 gi|30960804|gb|AAP39208.1| UL40 [Human herpesvirus 1]
 gi|30960807|gb|AAP39210.1| UL40 [Human herpesvirus 1]
 gi|30960810|gb|AAP39212.1| UL40 [Human herpesvirus 1]
 gi|30960816|gb|AAP39216.1| UL40 [Human herpesvirus 1]
 gi|30960822|gb|AAP39220.1| UL40 [Human herpesvirus 1]
 gi|30960825|gb|AAP39222.1| UL40 [Human herpesvirus 1]
 gi|30960828|gb|AAP39224.1| UL40 [Human herpesvirus 1]
 gi|30960834|gb|AAP39228.1| UL40 [Human herpesvirus 1]
 gi|30960840|gb|AAP39232.1| UL40 [Human herpesvirus 1]
 gi|30960843|gb|AAP39234.1| UL40 [Human herpesvirus 1]
 gi|30960846|gb|AAP39236.1| UL40 [Human herpesvirus 1]
 gi|30960849|gb|AAP39238.1| UL40 [Human herpesvirus 1]
 gi|30960852|gb|AAP39240.1| UL40 [Human herpesvirus 1]
 gi|30960855|gb|AAP39242.1| UL40 [Human herpesvirus 1]
 gi|30960858|gb|AAP39244.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score = 58.7 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 8/126 (6%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                    +  N W+ TE+     +   +  + L++ E    +    F ++++ LV  N
Sbjct: 11  PDINHLRSLSILNRWLETELVF---VGDEEDVSKLSEGELSFYRFLFAFLSAADDLVTEN 67

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD----EGELFNMYREVPSI 155
           +   +       +   Y + Q   E VHS  +  I   L  +      E        P+I
Sbjct: 68  LG-GLSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARREYVAGTINHPAI 126

Query: 156 TAKANW 161
            AK +W
Sbjct: 127 RAKVDW 132


>gi|30960831|gb|AAP39226.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score = 58.7 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 8/126 (6%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                    +  N W+ TE+     +   +  + L++ E    +    F ++++ LV  N
Sbjct: 11  PDINHLRSLSILNRWLETELVF---VGDEEDVSKLSEGELSFYRFLFAFLSAADDLVTEN 67

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD----EGELFNMYREVPSI 155
           +   +       +   Y + Q   E VHS  +  I   L  +      E        P+I
Sbjct: 68  LG-GLSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARREYVAGTINHPAI 126

Query: 156 TAKANW 161
            AK +W
Sbjct: 127 RAKVDW 132


>gi|30960753|gb|AAP39174.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score = 58.7 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 8/126 (6%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                    +  N W+ TE+     +   +  + L++ E    +    F ++++ LV  N
Sbjct: 11  PDINHLRSLSILNRWLETELVF---VGDEEDVSKLSEGELSFYRFLFAFLSAADDLVTEN 67

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD----EGELFNMYREVPSI 155
           +   +       +   Y + Q   E VHS  +  I   L  +      E        P+I
Sbjct: 68  LG-GLSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARREYVAGTINHPAI 126

Query: 156 TAKANW 161
            AK +W
Sbjct: 127 RAKVDW 132


>gi|30960813|gb|AAP39214.1| UL40 [Human herpesvirus 1]
 gi|30960819|gb|AAP39218.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score = 58.7 bits (141), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 8/126 (6%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                    +  N W+ TE+     +   +  + L++ E    +    F ++++ LV  N
Sbjct: 11  PDINHLRSLSILNRWLETELVF---VGDEEDVSKLSEGELSFYRFLFAFLSAADDLVTEN 67

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD----EGELFNMYREVPSI 155
           +   +       +   Y + Q   E VHS  +  I   L  +      E        P+I
Sbjct: 68  LG-GLSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARREYVAGTINHPAI 126

Query: 156 TAKANW 161
            AK +W
Sbjct: 127 RAKVDW 132


>gi|300859142|ref|YP_003784125.1| ribonucleoside-diphosphate reductase subunit beta [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300686596|gb|ADK29518.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302206836|gb|ADL11178.1| Ribonucleoside-diphosphate reductase subunit beta [Corynebacterium
           pseudotuberculosis C231]
 gi|302331398|gb|ADL21592.1| Ribonucleoside-diphosphate reductase beta chain 2 [Corynebacterium
           pseudotuberculosis 1002]
 gi|308277088|gb|ADO26987.1| Ribonucleoside-diphosphate reductase beta chain 2 [Corynebacterium
           pseudotuberculosis I19]
          Length = 340

 Score = 58.7 bits (141), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 53/123 (43%), Gaps = 15/123 (12%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +    +N W+P +VP+ +D+  W+   G+ ++ R ++ R        +++ A      
Sbjct: 36  EVWQRLTSNFWLPEKVPLSNDIPTWR---GMGENYRTLVTRTFTGLTLLDTVQAT----- 87

Query: 104 IYRHLSNPECR-----QYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYREVPSIT 156
           +      P+ R           AF +AVH+ ++  + ++L    +  E ++     P + 
Sbjct: 88  VGEISQIPDARTEHEQAVYTNIAFMQAVHARSYSSVFSTLCSSAEIDEAYSWAVSNPLLQ 147

Query: 157 AKA 159
            +A
Sbjct: 148 QRA 150


>gi|30960420|gb|AAP38952.1| UL40 [Human herpesvirus 1]
 gi|30960423|gb|AAP38954.1| UL40 [Human herpesvirus 1]
 gi|30960426|gb|AAP38956.1| UL40 [Human herpesvirus 1]
 gi|30960465|gb|AAP38982.1| UL40 [Human herpesvirus 1]
 gi|30960525|gb|AAP39022.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score = 58.3 bits (140), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 8/126 (6%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                    +  N W+ TE+     +   +  + L++ E    +    F ++++ LV  N
Sbjct: 11  PDINHLRSLSILNRWLETELVF---VGDEEDVSKLSEGELSFYRFLFAFLSAADDLVTEN 67

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD----EGELFNMYREVPSI 155
           +   +       +   Y + Q   E VHS  +  I   L  +      E        P+I
Sbjct: 68  LG-GLSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARREYVAGTINHPAI 126

Query: 156 TAKANW 161
            AK +W
Sbjct: 127 RAKVDW 132


>gi|30960729|gb|AAP39158.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score = 58.3 bits (140), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 8/126 (6%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                    +  N W+ TE+     +   +  + L++ E    +    F ++++ LV  N
Sbjct: 11  PDINHLRSLSILNRWLETELVF---VGDEEDVSKLSEGELSFYRFLFAFLSAADDLVTEN 67

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD----EGELFNMYREVPSI 155
           +   +       +   Y + Q   E VHS  +  I   L  +      E        P+I
Sbjct: 68  LG-GLSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARREYVAGTINHPAI 126

Query: 156 TAKANW 161
            AK +W
Sbjct: 127 RAKVDW 132


>gi|258510152|ref|YP_003183586.1| ribonucleotide reductase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257476878|gb|ACV57197.1| ribonucleotide reductase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 317

 Score = 58.3 bits (140), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 12/106 (11%)

Query: 34  LLPLKYGWAWEKYLSACN-NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
           +LP++       Y  A     W P ++    D   W+   G+ + ER +I R    F + 
Sbjct: 22  ILPMR------LYHKAKKLGTWDPRDIDFTKDKEDWQ---GMNEAERRVILRLCSLFVAG 72

Query: 93  ESLVANNIVLAIYRHLSN--PECRQYLLRQAFEEAVHSHTFQYIIT 136
           E  V  +++  I         E   YL    FEEA H+  F+  + 
Sbjct: 73  EEAVTLDLLPLIMAVAREGRLEEEMYLTTFLFEEAKHTEVFRRFLD 118


>gi|293380788|ref|ZP_06626833.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           crispatus 214-1]
 gi|290922652|gb|EFD99609.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           crispatus 214-1]
          Length = 335

 Score = 58.3 bits (140), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 56/143 (39%), Gaps = 5/143 (3%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
                      +K     E +     N W+P ++P+ +D++ W   N L+DD + +I R 
Sbjct: 19  GKNMRAINWNDIKDDKDLEVWNRVTQNFWLPEKIPVSNDISSW---NQLSDDWQQLITRT 75

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--G 143
                  ++  ++   +A  ++      +      AF  AVH+ ++  I ++L   E   
Sbjct: 76  FTGLTLLDTTQSSVGDVAQIKNSQTDIEQAIYANFAFMVAVHARSYGTIFSTLCTSEQIE 135

Query: 144 ELFNMYREVPSITAKANWALQYT 166
           E         ++ A+A   + Y 
Sbjct: 136 EAHEWVVNNDTLQARAKAVIPYY 158


>gi|256849455|ref|ZP_05554887.1| ribonucleoside-diphosphate reductase 2 alpha subunit [Lactobacillus
           crispatus MV-1A-US]
 gi|262046124|ref|ZP_06019087.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           crispatus MV-3A-US]
 gi|256713571|gb|EEU28560.1| ribonucleoside-diphosphate reductase 2 alpha subunit [Lactobacillus
           crispatus MV-1A-US]
 gi|260573454|gb|EEX30011.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           crispatus MV-3A-US]
          Length = 335

 Score = 58.3 bits (140), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 56/143 (39%), Gaps = 5/143 (3%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
                      +K     E +     N W+P ++P+ +D++ W   N L+DD + +I R 
Sbjct: 19  GKNMRAINWNDIKDDKDLEVWNRVTQNFWLPEKIPVSNDISSW---NQLSDDWQQLITRT 75

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--G 143
                  ++  ++   +A  ++      +      AF  AVH+ ++  I ++L   E   
Sbjct: 76  FTGLTLLDTTQSSVGDVAQIKNSQTDIEQAIYANFAFMVAVHARSYGTIFSTLCTSEQIE 135

Query: 144 ELFNMYREVPSITAKANWALQYT 166
           E         ++ A+A   + Y 
Sbjct: 136 EAHEWVVNNDTLQARAKAVIPYY 158


>gi|67592960|ref|XP_665685.1| ribonucleotide reductase small subunit [Cryptosporidium hominis
           TU502]
 gi|54656484|gb|EAL35456.1| ribonucleotide reductase small subunit [Cryptosporidium hominis]
          Length = 369

 Score = 58.3 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 47/152 (30%), Gaps = 13/152 (8%)

Query: 13  GEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKN 72
            E      ++ +L        L P+KY   W  Y     + W    +   +D        
Sbjct: 6   KELLEQQKNESILLDNPFRWVLFPIKYSRLWSLYKKYEVSFWTAEVISPMED-----KTK 60

Query: 73  GLTDDERLM--IKRNLGFFASSES--LVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
            +  DERL+  I+         ++  L    +   +   +  PE R Y       E ++ 
Sbjct: 61  LMNMDERLLDYIEMVFAKRIYIDNTCLDTVLLTCELLGQVQVPEARGYFSFTMCMENIYK 120

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKAN 160
             F   +  L  ++ +      +   +  K  
Sbjct: 121 ELFMNYVEMLRKNKEKN----EKTDEVEKKDE 148


>gi|227878534|ref|ZP_03996468.1| ribonucleoside-diphosphate reductase [Lactobacillus crispatus
           JV-V01]
 gi|227861868|gb|EEJ69453.1| ribonucleoside-diphosphate reductase [Lactobacillus crispatus
           JV-V01]
          Length = 352

 Score = 58.3 bits (140), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 56/143 (39%), Gaps = 5/143 (3%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
                      +K     E +     N W+P ++P+ +D++ W   N L+DD + +I R 
Sbjct: 36  GKNMRAINWNDIKDDKDLEVWNRVTQNFWLPEKIPVSNDISSW---NQLSDDWQQLITRT 92

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--G 143
                  ++  ++   +A  ++      +      AF  AVH+ ++  I ++L   E   
Sbjct: 93  FTGLTLLDTTQSSVGDVAQIKNSQTDIEQAIYANFAFMVAVHARSYGTIFSTLCTSEQIE 152

Query: 144 ELFNMYREVPSITAKANWALQYT 166
           E         ++ A+A   + Y 
Sbjct: 153 EAHEWVVNNDTLQARAKAVIPYY 175


>gi|134097201|ref|YP_001102862.1| ribonucleotide-diphosphate reductase subunit beta
           [Saccharopolyspora erythraea NRRL 2338]
 gi|291005341|ref|ZP_06563314.1| ribonucleotide-diphosphate reductase subunit beta
           [Saccharopolyspora erythraea NRRL 2338]
 gi|238055312|sp|A4F7B2|RIR2H_SACEN RecName: Full=R2-like ligand binding oxidase; AltName:
           Full=Ribonucleotide reductase R2 subunit homolog;
           AltName: Full=Ribonucleotide reductase small subunit
           homolog
 gi|133909824|emb|CAL99936.1| ribonucleoside-diphosphate reductase beta chain [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 317

 Score = 57.9 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 9/100 (9%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W P ++    D   W+   GLT++ER  +      F + E  V  ++    
Sbjct: 28  LFGKGNAKFWDPADIDFTRDAEDWQ---GLTEEERRSVAMLCSQFIAGEEAVTQDL-QPF 83

Query: 105 YRHLSNPECR----QYLLRQAFEEAVHSHTFQYIITSLGL 140
              +   E R     YL +  FEEA H+  F+  + ++GL
Sbjct: 84  MAAM-AAEGRFGDEMYLTQFCFEEAKHTQVFRLWMDAVGL 122


>gi|257069911|ref|YP_003156166.1| ribonucleotide-diphosphate reductase subunit beta [Brachybacterium
           faecium DSM 4810]
 gi|256560729|gb|ACU86576.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Brachybacterium faecium DSM 4810]
          Length = 341

 Score = 57.9 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 6/108 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN-NIVL 102
           E +     N W+P +VP+ +DL  W+    L + +R +  R        +++ A    + 
Sbjct: 43  EVWNRLTANFWLPEKVPLSNDLQAWQ---RLPEQDRTLTMRVFTGLTMLDTVQATVGEIC 99

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR 150
            I    +  E   Y    AF ++VH+ ++  + ++L     E+ + YR
Sbjct: 100 QIQDARTEHEEAVYTNI-AFMQSVHARSYSSVFSTLTSTP-EIDSAYR 145


>gi|194246584|ref|YP_002004223.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Phytoplasma mali]
 gi|193806941|emb|CAP18373.1| Ribonucleoside-diphosphate reductase, beta chain [Candidatus
           Phytoplasma mali]
          Length = 348

 Score = 57.9 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 52/131 (39%), Gaps = 15/131 (11%)

Query: 28  RSDVN----QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
             D+N         +  +    Y    +  W P ++ +Q DL  WK    L+  E+ +  
Sbjct: 3   NKDINYIGANWNQFEDPYTHFFYEQNLSQFWRPEDISLQGDLQTWKD---LSKFEKNVYS 59

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPE-----CRQYLLRQAFEEAVHSHTFQYIITSL 138
           +NL      ++   ++ +  I       E        ++   A E AVH+ ++  I  +L
Sbjct: 60  KNLLILTFLDTYQGDSGMFIISSSFKKEEHQKKATLNFMG--AMENAVHAKSYSNIFMTL 117

Query: 139 GLDEGELFNMY 149
            L+  E+ +++
Sbjct: 118 -LNSKEIDDLF 127


>gi|310722361|ref|YP_003969185.1| hypothetical protein phiAS4_ORF0167 [Aeromonas phage phiAS4]
 gi|306021204|gb|ADM79739.1| hypothetical protein phiAS4_ORF0167 [Aeromonas phage phiAS4]
          Length = 332

 Score = 57.9 bits (139), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 50/141 (35%), Gaps = 11/141 (7%)

Query: 37  LKYGWAWEKYLSACNNHWMPTE--VPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
           +KY    +      +  W   E  V   +D    ++K  LT  E   I   L  F   E 
Sbjct: 19  IKYPEFAKLADEQMHAFWPWDEPVVD--NDAQDLRTK--LTPGELNGITTVLKLFTIYER 74

Query: 95  LVANNI-VLAIYRHLSNPECRQYLLRQAFEE-AVHSHTFQYIITSLGLDEGELFNMYREV 152
            V  +     I R    PE  +     A  E   H+  +  +   L LD+   +  ++E 
Sbjct: 75  KVGEDYWSARIARTFGRPEINRMATLFAAVEGNSHAPFYNKVNEVLYLDDEAFYTSWKES 134

Query: 153 PSITAKANWALQYTQTLSSPS 173
             ++ +  +  +   ++S P 
Sbjct: 135 EELSRRIQFVGK---SVSDPD 152


>gi|30348565|emb|CAC84357.1| RRsmall [Saimiriine herpesvirus 2]
          Length = 305

 Score = 57.9 bits (139), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 46/122 (37%), Gaps = 8/122 (6%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E       N W P++VP+Q D+      + L + +    K    F   +E LV  NI   
Sbjct: 18  ELTKETWKNRWFPSQVPLQGDV---CCVDMLNERDLEFYKFLFTFLGMAEKLVNINI-ED 73

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE-GELFNM---YREVPSITAKA 159
           +     + +   Y   Q   E +H   +  I++ L  +   E+++         ++  K 
Sbjct: 74  LLSQFDSHDVSHYYAEQMAMENIHGKVYANILSMLFKNNITEVYSYACDIMNDSALQEKL 133

Query: 160 NW 161
            W
Sbjct: 134 KW 135


>gi|313892092|ref|ZP_07825688.1| ribonucleoside-diphosphate reductase, beta subunit [Dialister
           microaerophilus UPII 345-E]
 gi|329121529|ref|ZP_08250153.1| ribonucleotide-diphosphate reductase subunit beta [Dialister
           micraerophilus DSM 19965]
 gi|313119484|gb|EFR42680.1| ribonucleoside-diphosphate reductase, beta subunit [Dialister
           microaerophilus UPII 345-E]
 gi|327469444|gb|EGF14914.1| ribonucleotide-diphosphate reductase subunit beta [Dialister
           micraerophilus DSM 19965]
          Length = 338

 Score = 57.9 bits (139), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 54/126 (42%), Gaps = 7/126 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN-NIVL 102
           E +     N W+P  +PM +D+  W   N L+DD + ++ R        +++ A+   + 
Sbjct: 40  EVWNRVTQNFWLPENIPMSNDIPSW---NTLSDDWKQLVTRTFTGLTLLDTVQASIGDIA 96

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
            I   +++ E +      AF   VH+ ++  I ++L   E   E         ++ A+A 
Sbjct: 97  QIKNSVTDHE-QVIYANFAFMVGVHARSYGTIFSTLCSSEQIEEAHEWVVNNDALQARAK 155

Query: 161 WALQYT 166
             + Y 
Sbjct: 156 LLIPYY 161


>gi|300173988|ref|YP_003773154.1| ribonucleoside-diphosphate reductase subunit beta [Leuconostoc
           gasicomitatum LMG 18811]
 gi|299888367|emb|CBL92335.1| ribonucleoside-diphosphate reductase, beta subunit [Leuconostoc
           gasicomitatum LMG 18811]
          Length = 325

 Score = 57.9 bits (139), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 9/121 (7%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN-IV 101
           WEK        W+ T +P+ +DL  W+    ++D ER  +    G   + ++L + + + 
Sbjct: 26  WEKLTQQ---FWLDTRIPISNDLKTWR--GNMSDQERQTMNLVFGGLTTLDTLQSQDGMA 80

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKA 159
                 ++  E       Q F E+VH+ ++  I  +L        +F+       +  KA
Sbjct: 81  QLKLDVVNQKEEAVLNNIQ-FMESVHAKSYSSIFETLNEKTEIEAIFDWADTNEFLQYKA 139

Query: 160 N 160
           N
Sbjct: 140 N 140


>gi|256843983|ref|ZP_05549470.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           crispatus 125-2-CHN]
 gi|256613888|gb|EEU19090.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           crispatus 125-2-CHN]
          Length = 287

 Score = 57.9 bits (139), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 56/143 (39%), Gaps = 5/143 (3%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
                      +K     E +     N W+P ++P+ +D++ W   N L+DD + +I R 
Sbjct: 36  GKNMRAINWNDIKDDKDLEVWNRVTQNFWLPEKIPVSNDISSW---NQLSDDWQQLITRT 92

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--G 143
                  ++  ++   +A  ++      +      AF  AVH+ ++  I ++L   E   
Sbjct: 93  FTGLTLLDTTQSSVGDVAQIKNSQTDIEQAIYANFAFMVAVHARSYGTIFSTLCTSEQIE 152

Query: 144 ELFNMYREVPSITAKANWALQYT 166
           E         ++ A+A   + Y 
Sbjct: 153 EAHEWVVNNDTLQARAKAVIPYY 175


>gi|293363858|ref|ZP_06610594.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma
           alligatoris A21JP2]
 gi|292552348|gb|EFF41122.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma
           alligatoris A21JP2]
          Length = 340

 Score = 57.9 bits (139), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 55/128 (42%), Gaps = 7/128 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNI-VL 102
           E +     N W+P ++P+ +D+  W++   L+D+ + +I R        +++ A    + 
Sbjct: 42  EVWNRITQNFWLPEKIPVSNDIPSWRT---LSDEWQTLITRTFTGLTMLDTIQATVCDIA 98

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
            I   L++ E +      AF  AVH+ ++  I ++L   E   E      +   +  +A 
Sbjct: 99  QIPNSLTDHE-QVIYANFAFMVAVHARSYGTIFSTLCSSEQIEEAHEWVIDNEDLQERAR 157

Query: 161 WALQYTQT 168
             L Y   
Sbjct: 158 LLLPYYHN 165


>gi|302190764|ref|ZP_07267018.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           iners AB-1]
 gi|309804064|ref|ZP_07698145.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners LactinV 11V1-d]
 gi|309804878|ref|ZP_07698940.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners LactinV 09V1-c]
 gi|309807870|ref|ZP_07701802.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners LactinV 01V1-a]
 gi|309809732|ref|ZP_07703586.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners SPIN 2503V10-D]
 gi|312871305|ref|ZP_07731403.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners LEAF 3008A-a]
 gi|312872703|ref|ZP_07732768.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners LEAF 2062A-h1]
 gi|312873302|ref|ZP_07733357.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners LEAF 2052A-d]
 gi|312874885|ref|ZP_07734904.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners LEAF 2053A-b]
 gi|315654122|ref|ZP_07907038.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           iners ATCC 55195]
 gi|325912248|ref|ZP_08174645.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners UPII 143-D]
 gi|325913678|ref|ZP_08176040.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners UPII 60-B]
 gi|329919824|ref|ZP_08276775.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners SPIN 1401G]
 gi|308163832|gb|EFO66098.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners LactinV 11V1-d]
 gi|308165817|gb|EFO68038.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners LactinV 09V1-c]
 gi|308168972|gb|EFO71058.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners LactinV 01V1-a]
 gi|308169911|gb|EFO71950.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners SPIN 2503V10-D]
 gi|311089630|gb|EFQ48055.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners LEAF 2053A-b]
 gi|311091182|gb|EFQ49571.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners LEAF 2052A-d]
 gi|311091745|gb|EFQ50124.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners LEAF 2062A-h1]
 gi|311093319|gb|EFQ51665.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners LEAF 3008A-a]
 gi|315488818|gb|EFU78464.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           iners ATCC 55195]
 gi|325475907|gb|EGC79076.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners UPII 143-D]
 gi|325477037|gb|EGC80187.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners UPII 60-B]
 gi|328937171|gb|EGG33599.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           iners SPIN 1401G]
          Length = 337

 Score = 57.9 bits (139), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 55/141 (39%), Gaps = 5/141 (3%)

Query: 28  RSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLG 87
                    +      E +     N W+P ++P+ +DL  W   N L+ D + +I R   
Sbjct: 23  NMRSINWNKIDDDKDLEVWNRVTQNFWLPEKIPVSNDLPSW---NSLSKDWQQLITRTFT 79

Query: 88  FFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GEL 145
                +++ A+   +A  ++      +      AF  AVH+ ++  I ++L   +   E 
Sbjct: 80  GLTLLDTIQASIGDVAQIKNAQTDHEQAIYANFAFMVAVHARSYGTIFSTLCNSDQIDEA 139

Query: 146 FNMYREVPSITAKANWALQYT 166
            N      ++ A+A   + Y 
Sbjct: 140 HNWVINNEALQARAKALIPYY 160


>gi|237784654|ref|YP_002905359.1| ribonucleotide-diphosphate reductase subunit beta [Corynebacterium
           kroppenstedtii DSM 44385]
 gi|237757566|gb|ACR16816.1| ribonucleoside-diphosphate reductase beta chain [Corynebacterium
           kroppenstedtii DSM 44385]
          Length = 350

 Score = 57.5 bits (138), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 49/122 (40%), Gaps = 14/122 (11%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               L+     E +     N W+P +VP+ +D++ W   N L DD R +  +        
Sbjct: 25  NWNRLQDPKDLEVWQRLTGNFWLPEKVPLSNDISSW---NSLPDDLRQLTVKIFTGLTLL 81

Query: 93  ESLVANNIVLAIYRHLSNPECR-----QYLLRQAFEEAVHSHTFQYIITSLGLDEGELFN 147
           +++ A      +      P+ R           AF ++VH+ ++  + ++L     E+ +
Sbjct: 82  DTVQAT-----VGEVSQIPDGRTEHEQAVYTNIAFMQSVHARSYSSVFSTLCSTP-EITD 135

Query: 148 MY 149
            Y
Sbjct: 136 AY 137


>gi|30960837|gb|AAP39230.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score = 57.5 bits (138), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 44/126 (34%), Gaps = 8/126 (6%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                    +  N W+ TE+     +   +  + L++ E    +    F ++++ LV  N
Sbjct: 11  PDINHLRSLSILNRWLETELVF---VGDEEDVSKLSEGELSFYRFLFAFLSAADDLVTEN 67

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD----EGELFNMYREVPSI 155
           +   +       +   Y + Q   E VHS  +  I   L  +      E        P+I
Sbjct: 68  LG-GLSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARREYVAGTINHPAI 126

Query: 156 TAKANW 161
             K +W
Sbjct: 127 RTKVDW 132


>gi|259500785|ref|ZP_05743687.1| ribonucleoside-diphosphate reductase 2 [Lactobacillus iners DSM
           13335]
 gi|259167479|gb|EEW51974.1| ribonucleoside-diphosphate reductase 2 [Lactobacillus iners DSM
           13335]
          Length = 339

 Score = 57.5 bits (138), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 55/141 (39%), Gaps = 5/141 (3%)

Query: 28  RSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLG 87
                    +      E +     N W+P ++P+ +DL  W   N L+ D + +I R   
Sbjct: 25  NMRSINWNKIDDDKDLEVWNRVTQNFWLPEKIPVSNDLPSW---NSLSKDWQQLITRTFT 81

Query: 88  FFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GEL 145
                +++ A+   +A  ++      +      AF  AVH+ ++  I ++L   +   E 
Sbjct: 82  GLTLLDTIQASIGDVAQIKNAQTDHEQAIYANFAFMVAVHARSYGTIFSTLCNSDQIDEA 141

Query: 146 FNMYREVPSITAKANWALQYT 166
            N      ++ A+A   + Y 
Sbjct: 142 HNWVINNEALQARAKALIPYY 162


>gi|259046997|ref|ZP_05737398.1| ribonucleoside-diphosphate reductase 2, beta subunit
           [Granulicatella adiacens ATCC 49175]
 gi|259036316|gb|EEW37571.1| ribonucleoside-diphosphate reductase 2, beta subunit
           [Granulicatella adiacens ATCC 49175]
          Length = 346

 Score = 57.5 bits (138), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 65/167 (38%), Gaps = 18/167 (10%)

Query: 19  VDDKRMLNARSDVNQLLPLKYGWAWEK-----------YLSACNNHWMPTEVPMQDDLAL 67
           +  KR  N     N   P++Y  A +            +       W+ T +P+ +DL  
Sbjct: 11  MSTKRYFNEILSQNSTQPVEYYKAIDWNQVEDMIDKLTWEKLTEQFWLDTRIPVSNDLDD 70

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHL-SNPECRQYLLRQAFEEAV 126
           W++   L+  E+ ++ +  G     ++L +      +  ++ +  E   +   Q F E+V
Sbjct: 71  WRT---LSPAEKDVVGKVFGGLTLLDTLQSEEGASLMKDYVRTQHEEAVWNNIQ-FMESV 126

Query: 127 HSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWALQYTQTLSS 171
           H+ ++  I ++L       ++F        +  KA    +  Q+  +
Sbjct: 127 HAKSYSTIFSTLHTKAEIEDIFEWTNNNEYLQFKAKKINEIYQSKDA 173


>gi|294955280|ref|XP_002788462.1| ribonucleoside-diphosphate reductase small chain, putative
          [Perkinsus marinus ATCC 50983]
 gi|239903931|gb|EER20258.1| ribonucleoside-diphosphate reductase small chain, putative
          [Perkinsus marinus ATCC 50983]
          Length = 157

 Score = 57.5 bits (138), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 3/39 (7%)

Query: 46 YLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR 84
          Y     + W   E+ +  DL  W++   LT +E+  IK 
Sbjct: 1  YKQHEASFWTAEEIDLGQDLRDWET---LTKNEQHFIKN 36


>gi|184156148|ref|YP_001844488.1| ribonucleoside-diphosphate reductase beta subunit [Lactobacillus
           fermentum IFO 3956]
 gi|227515317|ref|ZP_03945366.1| ribonucleoside-diphosphate reductase [Lactobacillus fermentum ATCC
           14931]
 gi|260662379|ref|ZP_05863274.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           fermentum 28-3-CHN]
 gi|183227492|dbj|BAG28008.1| ribonucleoside-diphosphate reductase beta subunit [Lactobacillus
           fermentum IFO 3956]
 gi|227086331|gb|EEI21643.1| ribonucleoside-diphosphate reductase [Lactobacillus fermentum ATCC
           14931]
 gi|260553070|gb|EEX26013.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           fermentum 28-3-CHN]
 gi|299783625|gb|ADJ41623.1| Ribonucleoside-diphosphate reductase beta subunit [Lactobacillus
           fermentum CECT 5716]
          Length = 316

 Score = 57.5 bits (138), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 50/115 (43%), Gaps = 5/115 (4%)

Query: 46  YLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIY 105
           +  A    W+ T VP+ +D   W++   LTD E+ +I + +G  A  ++L +   V  + 
Sbjct: 20  WDKATAQFWLDTRVPVSNDRGDWRT---LTDSEKGVINKVVGGLALLDTLQSEEGVNVMR 76

Query: 106 RHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--LDEGELFNMYREVPSITAK 158
                 +    +      E++H+ ++  I+++L       + F+     P +  K
Sbjct: 77  EDARTRKEVGVINDFLMMESIHAKSYGTILSTLNDQKTIDDTFHWMNNDPRMQYK 131


>gi|121729792|ref|ZP_01682228.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|121628467|gb|EAX60957.1| conserved hypothetical protein [Vibrio cholerae V52]
          Length = 107

 Score = 57.5 bits (138), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 38/104 (36%), Gaps = 3/104 (2%)

Query: 11  QAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKS 70
              +K   + +   L    +V +    KY    +      +  W P EV +  D   +  
Sbjct: 6   FTQKKNDQLKEPMFLGQPVNVARYDQQKYEIFEKLIEKQLSFFWRPEEVDVSSDRIDY-- 63

Query: 71  KNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECR 114
              L D E+ +   NL +    +S+   +  +A+   +S PE  
Sbjct: 64  -GKLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSLPELE 106


>gi|126437012|ref|YP_001072703.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           sp. JLS]
 gi|238055308|sp|A3Q4Y5|RIR2H_MYCSJ RecName: Full=R2-like ligand binding oxidase; AltName:
           Full=Ribonucleotide reductase R2 subunit homolog;
           AltName: Full=Ribonucleotide reductase small subunit
           homolog
 gi|126236812|gb|ABO00213.1| putative ribonucleotide reductase small chain [Mycobacterium sp.
           JLS]
          Length = 312

 Score = 57.5 bits (138), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 9/104 (8%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           + +       W P ++    D A W+S + L   ER    R    F + E  V  +I   
Sbjct: 22  KLFAGGNAKFWDPADIDFSKDRADWESLSNL---ERDWATRLCAQFIAGEEAVTQDI-QP 77

Query: 104 IYRHLSNPECR----QYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
               +   E R     YL + AFEEA H+  F+  + ++G+ + 
Sbjct: 78  FMAAMRA-EGRLGDEMYLTQFAFEEAKHTQVFRMWLDAVGMTDD 120


>gi|295695705|ref|YP_003588943.1| ribonucleotide reductase [Bacillus tusciae DSM 2912]
 gi|295411307|gb|ADG05799.1| ribonucleotide reductase [Bacillus tusciae DSM 2912]
          Length = 296

 Score = 57.5 bits (138), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 12/107 (11%)

Query: 33  QLLPLKYGWAWEKYLSACN-NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFAS 91
           ++LP++       Y  A     W P E+    D   WK+   LT D++ +I +    F +
Sbjct: 15  EILPMR------LYHKAKKLGIWDPKELDFTQDREDWKT---LTTDQKELILKLCSLFQA 65

Query: 92  SESLVANNIVLAIYRHLSN--PECRQYLLRQAFEEAVHSHTFQYIIT 136
            E  V  +++  I    S    E   YL    FEEA H+ +F+  + 
Sbjct: 66  GEEAVTRDLLPLIRVVASEGRLEEEMYLTTFLFEEAKHTESFRLFLD 112


>gi|313884792|ref|ZP_07818546.1| ribonucleoside-diphosphate reductase, beta subunit [Eremococcus
           coleocola ACS-139-V-Col8]
 gi|312619991|gb|EFR31426.1| ribonucleoside-diphosphate reductase, beta subunit [Eremococcus
           coleocola ACS-139-V-Col8]
          Length = 363

 Score = 57.5 bits (138), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 51/128 (39%), Gaps = 8/128 (6%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W+    L+  E+ M+ +  G     +++ +    +
Sbjct: 23  WEKLTEQ---FWLDTRIPVSNDLDDWR---RLSKAEQDMVGKVFGGLTLLDTVQSEQGAI 76

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
            +         R  L    F E+VH+ ++  I  +L  +     +F        I  K++
Sbjct: 77  VLLPDARTSHERSVLSNIHFMESVHAKSYSTIFITLNTNAEIDAIFEWTDTHELIQFKSD 136

Query: 161 WALQYTQT 168
              +  QT
Sbjct: 137 KINRIYQT 144


>gi|30960654|gb|AAP39108.1| UL40 [Human herpesvirus 1]
          Length = 307

 Score = 57.5 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 8/126 (6%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                    +  N W+ TE+     +   +  + L++ E    +    F ++++ LV  N
Sbjct: 11  PDINHLRSLSILNRWLETELVF---VGDEEDVSKLSEGELSFYRFLFAFLSAADDLVTEN 67

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD----EGELFNMYREVPSI 155
           +   +       +   Y + Q   E VHS  +  I   L  +      E        P+I
Sbjct: 68  MG-GLSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARREYVAGTINHPAI 126

Query: 156 TAKANW 161
            AK +W
Sbjct: 127 RAKVDW 132


>gi|54020059|ref|YP_115670.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma
           hyopneumoniae 232]
 gi|53987232|gb|AAV27433.1| ribonucleoside-diphosphate reductase beta chain [Mycoplasma
           hyopneumoniae 232]
          Length = 353

 Score = 57.5 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 55/145 (37%), Gaps = 7/145 (4%)

Query: 25  LNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR 84
            + +        +      E +     N W+P ++P+ +DL  W++   L+   + ++ R
Sbjct: 36  FSGKMRSINWNIINDPKDLEVWTRIVQNFWIPEKIPLSNDLESWRT---LSPTWKKVVTR 92

Query: 85  NLGFFASSESLVAN-NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE- 142
                   +++ A    V  I   L++ E +      AF   VH+ ++  I ++L   E 
Sbjct: 93  TFTGLTLLDTIQATIGDVAQIKHSLTDHE-QVIYTNFAFMVGVHARSYGSIFSTLCSSEE 151

Query: 143 -GELFNMYREVPSITAKANWALQYT 166
             E  N       +  +A   + + 
Sbjct: 152 IEEAHNWVINNEKLQKRARILIPFY 176


>gi|296111477|ref|YP_003621859.1| ribonucleotide-diphosphate reductase beta subunit [Leuconostoc
           kimchii IMSNU 11154]
 gi|295833009|gb|ADG40890.1| ribonucleotide-diphosphate reductase beta subunit [Leuconostoc
           kimchii IMSNU 11154]
          Length = 325

 Score = 57.2 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 9/121 (7%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN-IV 101
           WEK        W+ T +P+ +DL  W+    ++D ER  +    G   + ++L + + + 
Sbjct: 26  WEKLTQQ---FWLDTRIPISNDLKNWR--GNMSDQERQTMNLVFGGLTTLDTLQSQDGMA 80

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKA 159
                 ++  E       Q F E+VH+ ++  I  +L        +F+       +  KA
Sbjct: 81  QLKLDVVNQKEEAVLNNIQ-FMESVHAKSYSSIFETLNEKSEIEAIFDWADTNEFLQYKA 139

Query: 160 N 160
           N
Sbjct: 140 N 140


>gi|9626016|ref|NP_040262.1| ribonucleotide reductase, small subunit [Saimiriine herpesvirus 2]
 gi|266917|sp|Q01038|RIR2_SHV21 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|66391|pir||WMBEP5 ribonucleoside-diphosphate reductase (EC 1.17.4.1) small chain -
           saimiriine herpesvirus 1 (strain 11)
 gi|60381|emb|CAA45683.1| ribonucleotide reductase, small subunit [Saimiriine herpesvirus 2]
 gi|330989|gb|AAA46136.1| ribonucleotide reductase small subunit [Saimiriine herpesvirus 2]
          Length = 305

 Score = 57.2 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 45/122 (36%), Gaps = 8/122 (6%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E       N W P++VP+Q D+      + L + +    K    F   +E LV  NI   
Sbjct: 18  ELTKETWKNRWFPSQVPLQGDV---CCVDMLNERDLEFYKFLFTFLGMAEKLVNINI-ED 73

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE-GELFNM---YREVPSITAKA 159
           +     + +   Y   Q   E +H   +  I+  L  +   E+++         ++  K 
Sbjct: 74  LLSQFDSHDISHYYAEQMAMENIHGKVYANILNMLFKNNITEVYSYACDIMNDSALQEKL 133

Query: 160 NW 161
            W
Sbjct: 134 RW 135


>gi|284033796|ref|YP_003383727.1| ribonucleotide reductase [Kribbella flavida DSM 17836]
 gi|283813089|gb|ADB34928.1| ribonucleotide reductase [Kribbella flavida DSM 17836]
          Length = 319

 Score = 57.2 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 10/113 (8%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W P ++    D   W+    LT +E+         F + E  V  ++    
Sbjct: 30  LFDKGNRKFWNPRDLDFSQDAEDWQ---RLTPNEKDNAMMLCAQFIAGEEAVTEDL-QPF 85

Query: 105 YRHLSNPECR----QYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVP 153
            + +   E R     YL +  FEEA H+  F+  + ++G+ E  L       P
Sbjct: 86  LQAM-AAEGRFGDEMYLTQFCFEEAKHTAVFRLWLDAVGVTED-LHRYVENNP 136


>gi|13242410|ref|NP_077433.1| ribonucleotide reductase subunit 2 [Cercopithecine herpesvirus 9]
 gi|11036562|gb|AAG27191.1|AF275348_11 ribonucleotide reductase, small subunit [Cercopithecine herpesvirus
           9]
          Length = 311

 Score = 57.2 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 44/127 (34%), Gaps = 10/127 (7%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQ-DDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN 98
               E    + +N W+  E     +D   ++    LT++E    K    F ++++ LV  
Sbjct: 18  PDINELRSLSISNRWL--ETDFTLED--DYQYIKCLTEEELSFYKFIFTFLSAADDLVNV 73

Query: 99  NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ----YIITSLGLDEGELFNMYREVPS 154
           NI   I       +   Y L Q   E VHS  +      +      +         +   
Sbjct: 74  NIGSLI-TLFKQKDIHHYYLEQECIEVVHSRIYSQIQLMLFEGDIFERLRYTEATIQDAY 132

Query: 155 ITAKANW 161
           I AK +W
Sbjct: 133 IKAKVDW 139


>gi|71893573|ref|YP_279019.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma
           hyopneumoniae J]
 gi|72080562|ref|YP_287620.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma
           hyopneumoniae 7448]
          Length = 339

 Score = 57.2 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 55/145 (37%), Gaps = 7/145 (4%)

Query: 25  LNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR 84
            + +        +      E +     N W+P ++P+ +DL  W++   L+   + ++ R
Sbjct: 22  FSGKMRSINWNIINDPKDLEVWTRIVQNFWIPEKIPLSNDLESWRT---LSPTWKKVVTR 78

Query: 85  NLGFFASSESLVAN-NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE- 142
                   +++ A    V  I   L++ E +      AF   VH+ ++  I ++L   E 
Sbjct: 79  TFTGLTLLDTIQATIGDVAQIKHSLTDHE-QVIYTNFAFMVGVHARSYGSIFSTLCSSEE 137

Query: 143 -GELFNMYREVPSITAKANWALQYT 166
             E  N       +  +A   + + 
Sbjct: 138 IEEAHNWVINNEKLQKRARILIPFY 162


>gi|144227519|gb|AAZ44308.2| ribonucleoside-diphosphate reductase beta chain [Mycoplasma
           hyopneumoniae J]
          Length = 353

 Score = 57.2 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 55/145 (37%), Gaps = 7/145 (4%)

Query: 25  LNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR 84
            + +        +      E +     N W+P ++P+ +DL  W++   L+   + ++ R
Sbjct: 36  FSGKMRSINWNIINDPKDLEVWTRIVQNFWIPEKIPLSNDLESWRT---LSPTWKKVVTR 92

Query: 85  NLGFFASSESLVAN-NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE- 142
                   +++ A    V  I   L++ E +      AF   VH+ ++  I ++L   E 
Sbjct: 93  TFTGLTLLDTIQATIGDVAQIKHSLTDHE-QVIYTNFAFMVGVHARSYGSIFSTLCSSEE 151

Query: 143 -GELFNMYREVPSITAKANWALQYT 166
             E  N       +  +A   + + 
Sbjct: 152 IEEAHNWVINNEKLQKRARILIPFY 176


>gi|255683173|ref|YP_003084381.1| UL40 [Duck enteritis virus]
 gi|158343199|gb|ABW35292.1| ribonucleotide reductase subunit 2 [Anatid herpesvirus 1]
 gi|208401182|gb|ACI26683.1| UL40 [Anatid herpesvirus 1]
 gi|254839988|gb|ACT83534.1| UL40 [Anatid herpesvirus 1]
          Length = 355

 Score = 57.2 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 48/125 (38%), Gaps = 10/125 (8%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
           N W+ +E+   DD A     + LT  E    +    F ++++ LV  N+   +       
Sbjct: 74  NRWLESELVFLDDAAD---VDKLTPSELDFYRFIFTFLSAADDLVNCNLG-NLMGLFEEK 129

Query: 112 ECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFN-----MYREVPSITAKANWALQYT 166
           + + Y + Q   EAVHS  +  I   L  ++            RE  SI +K  W  +  
Sbjct: 130 DIQHYYVEQESIEAVHSRVYSIIQLILFKNDATARAEYVKKAIRE-TSIRSKVKWISERV 188

Query: 167 QTLSS 171
           +    
Sbjct: 189 EECED 193


>gi|321496611|ref|YP_004207896.1| ribonucleotide reductase small subunit [Rodent herpesvirus Peru]
 gi|320332513|gb|ADW24401.1| ribonucleotide reductase small subunit [Rodent herpesvirus Peru]
 gi|320332596|gb|ADW24483.1| ribonucleotide reductase small subunit [Rodent herpesvirus Peru]
          Length = 307

 Score = 57.2 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 53/161 (32%), Gaps = 13/161 (8%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           + +            N W P ++P+  D         L++ ++   K    F   +E LV
Sbjct: 13  VDHPGFLALTEETWKNRWFPYQIPLAVDAKD---VTKLSETDKEFYKFLFIFLGLAEKLV 69

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV---- 152
             NI   +   + + + + Y   Q   E +H   +  I+      +      Y       
Sbjct: 70  NFNI-DELLVGIHSHDAKHYYDEQEAMENIHGKVYANILNLFFEGDKAKMRQYAHFVVGN 128

Query: 153 PSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
           P + AK +W     +  +        ++    +L   + F+
Sbjct: 129 PGLKAKLSWLHDKVREAT-----TIAEKVLVFLLIEGIFFV 164


>gi|323341317|ref|ZP_08081561.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           ruminis ATCC 25644]
 gi|323091194|gb|EFZ33822.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           ruminis ATCC 25644]
          Length = 317

 Score = 57.2 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 52/121 (42%), Gaps = 8/121 (6%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            WEK        W+ T +P+ +DL  WK    + ++E  ++++  G     ++L + + +
Sbjct: 21  VWEKLTEQ---FWLDTRIPLSNDLNDWKK---MKEEEHALVEKVFGGLTLLDTLQSVDGM 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKA 159
            A+ +          L    F E+VH+ ++  I ++L       E+F    +   +  KA
Sbjct: 75  SALKKDALTSHEAAVLNNIEFMESVHAKSYSSIFSTLNTPAEIEEIFEWTEKNEYLQYKA 134

Query: 160 N 160
            
Sbjct: 135 E 135


>gi|9628063|ref|NP_042657.1| ribonucleotide reductase, small subunit [Equid herpesvirus 2]
 gi|82013696|sp|Q66662|RIR2_EHV2 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|695233|gb|AAC13848.1| ribonucleotide reductase, small subunit [Equid herpesvirus 2]
          Length = 305

 Score = 57.2 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 54/147 (36%), Gaps = 13/147 (8%)

Query: 51  NNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSN 110
            N W P+++ +  D+A  +S   L   +    K    F A +E LV  NI   +     +
Sbjct: 25  QNRWFPSQISLTSDVACLQS---LNPRDLEFYKFLFSFLAMAEKLVNFNIQALVAD-FHS 80

Query: 111 PECRQYLLRQAFEEAVHSHTFQYIITSLGLDE-GELFNMYREV---PSITAKANWALQYT 166
            +   Y   Q   E +H   +  I+     +  GE+    RE+    ++ AK +W     
Sbjct: 81  HDLEHYYTEQEAMENIHGKVYANILNMFFKNNVGEMQKYAREIVGDEALAAKLHWLHGRV 140

Query: 167 QTLSSPSFHYWNKRRRSRILTRSLRFL 193
                       ++    +L   + F+
Sbjct: 141 SEA-----KTRAEKVLVFLLIEGIFFI 162


>gi|284931055|gb|ADC30993.1| Ribonucleoside-diphosphate reductase subunit beta [Mycoplasma
           gallisepticum str. F]
          Length = 339

 Score = 57.2 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 55/140 (39%), Gaps = 9/140 (6%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +     N W+P ++P+ +DL  W   N LT + + ++ R        
Sbjct: 30  NWNVINDPKDLEVWTRVTQNFWLPEKIPVSNDLKSW---NELTPEWKQLVTRTFTGLTLL 86

Query: 93  ESLV-ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR- 150
           +++      +  I   L++ E +      +F   VH+ ++  I ++L     E+   +  
Sbjct: 87  DTIQCTLGDIAQIPNSLTDHE-QFVYANFSFMVGVHARSYGTIFSTLNT-SDEIEEAHEW 144

Query: 151 --EVPSITAKANWALQYTQT 168
                 + A+A + + Y  +
Sbjct: 145 VINNEKLQARAKFLVPYYTS 164


>gi|31544249|ref|NP_852827.1| ribonucleoside-diphosphate reductase subunit beta [Mycoplasma
           gallisepticum str. R(low)]
 gi|26398734|sp|Q9XC20|RIR2_MYCGA RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|5565932|gb|AAD45275.1|AF152114_3 ribonucleoside-diphosphate reductase beta chain [Mycoplasma
           gallisepticum]
 gi|31541093|gb|AAP56395.1| Ribonucleoside-diphosphate reductase subunit beta [Mycoplasma
           gallisepticum str. R(low)]
 gi|284930288|gb|ADC30227.1| Ribonucleoside-diphosphate reductase subunit beta [Mycoplasma
           gallisepticum str. R(high)]
          Length = 339

 Score = 57.2 bits (137), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 55/140 (39%), Gaps = 9/140 (6%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
               +      E +     N W+P ++P+ +DL  W   N LT + + ++ R        
Sbjct: 30  NWNVINDPKDLEVWTRVTQNFWLPEKIPVSNDLKSW---NELTPEWKQLVTRTFTGLTLL 86

Query: 93  ESLV-ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR- 150
           +++      +  I   L++ E +      +F   VH+ ++  I ++L     E+   +  
Sbjct: 87  DTIQCTLGDIAQIPNSLTDHE-QFVYANFSFMVGVHARSYGTIFSTLNT-SDEIEEAHEW 144

Query: 151 --EVPSITAKANWALQYTQT 168
                 + A+A + + Y  +
Sbjct: 145 VINNEKLQARAKFLVPYYTS 164


>gi|108801178|ref|YP_641375.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           sp. MCS]
 gi|119870310|ref|YP_940262.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           sp. KMS]
 gi|123069734|sp|Q1B465|RIR2H_MYCSS RecName: Full=R2-like ligand binding oxidase; AltName:
           Full=Ribonucleotide reductase R2 subunit homolog;
           AltName: Full=Ribonucleotide reductase small subunit
           homolog
 gi|238055309|sp|A1UKW4|RIR2H_MYCSK RecName: Full=R2-like ligand binding oxidase; AltName:
           Full=Ribonucleotide reductase R2 subunit homolog;
           AltName: Full=Ribonucleotide reductase small subunit
           homolog
 gi|108771597|gb|ABG10319.1| putative ribonucleoside-diphosphate reductase (beta chain) NrdB
           (ribonucleotide reductase small chain) [Mycobacterium
           sp. MCS]
 gi|119696399|gb|ABL93472.1| putative ribonucleoside-diphosphate reductase [Mycobacterium sp.
           KMS]
          Length = 312

 Score = 56.8 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 9/104 (8%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           + +       W P ++    D A W+S + L   ER    R    F + E  V  +I   
Sbjct: 22  KLFAGGNAKFWDPADIDFSRDRADWESLSNL---ERDWATRLCAQFIAGEEAVTQDI-QP 77

Query: 104 IYRHLSNPECR----QYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
               +   E R     YL + AFEEA H+  F+  + ++G+ + 
Sbjct: 78  FMAAMRA-EGRLGDEMYLTQFAFEEAKHTQVFRMWLDAVGMTDD 120


>gi|326692188|ref|ZP_08229193.1| ribonucleotide-diphosphate reductase subunit beta [Leuconostoc
           argentinum KCTC 3773]
          Length = 325

 Score = 56.8 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 50/121 (41%), Gaps = 9/121 (7%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN-IV 101
           WEK        W+ T +P+ +DL  W+    ++  E+  +    G   + ++L + + + 
Sbjct: 27  WEKLTQQ---FWLDTRIPISNDLRHWR--GNMSPQEQKTMNLVFGGLTTLDTLQSQDGLA 81

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKA 159
              +  L+  E       Q F E++H+ ++  I  +L        +F+       +  KA
Sbjct: 82  QLKFDSLNQKEEAVLNNIQ-FMESIHAKSYSSIFETLNEKSEIEAIFDWADNNEFLQYKA 140

Query: 160 N 160
           N
Sbjct: 141 N 141


>gi|12642668|gb|AAK00340.1| ribonucleotide reductase small subunit [Bovine herpesvirus 2]
          Length = 313

 Score = 56.8 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 8/126 (6%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                    +  N W+ +E+    D       + L+  E    +    F ++++ LV   
Sbjct: 17  PDINRLRSLSILNRWLESELVFAGDEED---VDRLSPGELDFYRFLFTFLSAADDLVTEE 73

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY--REV--PSI 155
           +   +       +   Y + Q   E VHS  +  I   L  ++     +Y  R V  P+I
Sbjct: 74  LG-RLSGLFYQKDILHYYVEQECIEVVHSRVYSIIQMVLFKNDDAARRIYVARTVGHPAI 132

Query: 156 TAKANW 161
            AK +W
Sbjct: 133 HAKVDW 138


>gi|120404438|ref|YP_954267.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           vanbaalenii PYR-1]
 gi|238055311|sp|A1TAR1|RIR2H_MYCVP RecName: Full=R2-like ligand binding oxidase; AltName:
           Full=Ribonucleotide reductase R2 subunit homolog;
           AltName: Full=Ribonucleotide reductase small subunit
           homolog
 gi|119957256|gb|ABM14261.1| ribonucleotide reductase [Mycobacterium vanbaalenii PYR-1]
          Length = 312

 Score = 56.8 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 9/103 (8%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W P ++    D A W+S   LTD ER    R    F + E  V  +I    
Sbjct: 23  LFAGGNAKFWDPADIDFSRDRADWES---LTDLERDWATRLCAEFIAGEEAVTQDI-QPF 78

Query: 105 YRHLSNPECR----QYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
              +   E R     YL + AFEEA H+  F+  + ++G+ E 
Sbjct: 79  MAAMRA-EGRLGDEMYLTQFAFEEAKHTQVFRMWLDAVGITED 120


>gi|170017903|ref|YP_001728822.1| ribonucleotide reductase, beta subunit [Leuconostoc citreum KM20]
 gi|169804760|gb|ACA83378.1| Ribonucleotide reductase, beta subunit [Leuconostoc citreum KM20]
          Length = 324

 Score = 56.8 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 9/121 (7%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN-IV 101
           WEK        W+ T +P+ +DL  W+    ++D ER  +    G   + ++L + + + 
Sbjct: 26  WEKLTQQ---FWLDTRIPISNDLRTWR--GNMSDQERQTLNLVFGGLTTLDTLQSQDGMA 80

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKA 159
                 ++  E       Q F E+VH+ ++  I  +L        +F+       +  KA
Sbjct: 81  SLKLDVVNQKEEAVLNNIQ-FMESVHAKSYSSIFETLNEKSEIEAIFDWADSNEFLQYKA 139

Query: 160 N 160
           N
Sbjct: 140 N 140


>gi|9625893|ref|NP_040141.1| ribonucleotide reductase subunit 2 [Human herpesvirus 3]
 gi|132630|sp|P09247|RIR2_VZVD RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           Short=R2; AltName: Full=Ribonucleotide reductase small
           subunit
 gi|259645448|sp|Q4JQV7|RIR2_VZVO RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           Short=R2; AltName: Full=Ribonucleotide reductase small
           subunit
 gi|60007|emb|CAA27901.1| ribonucleotide reductase (small subunit) [Human herpesvirus 3
           strain Dumas]
 gi|46981429|gb|AAT07700.1| ribonucleotide reductase small subunit [Human herpesvirus 3]
 gi|46981500|gb|AAT07776.1| ribonucleotide reductase small subunit [Human herpesvirus 3]
 gi|66865986|gb|AAY57634.1| ORF18 [Human herpesvirus 3]
 gi|66866058|gb|AAY57705.1| ORF18 [Human herpesvirus 3]
 gi|83721826|emb|CAI44861.1| ribonucleotide reductase small subunit [Human herpesvirus 3]
 gi|90992817|gb|ABE03036.1| ribonucleotide reductase small subunit [Human herpesvirus 3]
 gi|91980319|gb|ABE67126.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
 gi|94481816|gb|ABF21518.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
 gi|94481890|gb|ABF21591.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
 gi|94481964|gb|ABF21664.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
 gi|94482038|gb|ABF21737.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
 gi|94482112|gb|ABF21810.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
 gi|94482186|gb|ABF21883.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
 gi|94482260|gb|ABF21956.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
 gi|94482334|gb|ABF22029.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
 gi|94482408|gb|ABF22102.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
 gi|94482482|gb|ABF22175.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
 gi|94482556|gb|ABF22248.1| small subunit ribonucleotide reductase [Human herpesvirus 3]
 gi|111184743|gb|ABH08451.1| ribonucleotide reductase small subunit [Human herpesvirus 3]
 gi|157965778|gb|ABW06924.1| ribonucleotide reductase small subunit [Human herpesvirus 3]
          Length = 306

 Score = 56.8 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 50/129 (38%), Gaps = 14/129 (10%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDL---ALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
                    + +N W      ++ D      ++  + LT+DE +  +    F ++++ LV
Sbjct: 16  PDINNLRALSISNRW------LESDFIIEDDYQYLDCLTEDELIFYRFIFTFLSAADDLV 69

Query: 97  ANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI-ITSLGLDEG---ELFNMYREV 152
             N+   + +  S  +   Y + Q   E VH+  +  I +     DE    +  N+    
Sbjct: 70  NVNLGS-LTQLFSQKDIHHYYIEQECIEVVHARVYSQIQLMLFRGDESLRVQYVNVTINN 128

Query: 153 PSITAKANW 161
           PSI  K  W
Sbjct: 129 PSIQQKVQW 137


>gi|323342959|ref|ZP_08083190.1| ribonucleotide-diphosphate reductase subunit beta [Erysipelothrix
           rhusiopathiae ATCC 19414]
 gi|322463023|gb|EFY08218.1| ribonucleotide-diphosphate reductase subunit beta [Erysipelothrix
           rhusiopathiae ATCC 19414]
          Length = 358

 Score = 56.8 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 7/109 (6%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            Y    +  W P ++ +Q DL LW S   L++D +L   RNL      ++   +  +  +
Sbjct: 31  FYEQNLSQFWRPEDISLQPDLNLWAS---LSEDVKLAYGRNLLVLTFLDTYQGDIGMPVV 87

Query: 105 YRHL--SNPECRQYLLRQAFEEA-VHSHTFQYIITSLGLDEGELFNMYR 150
            R +     + +  L   A  E  VH+ ++  I  +   +E E+ ++YR
Sbjct: 88  SRSIDHKYHQRKSVLNFMAAMENAVHAKSYSNIFMTYMKNE-EIDDLYR 135


>gi|9631250|ref|NP_048031.1| small subunit of ribonucleotide reductase [Ateline herpesvirus 3]
 gi|4019286|gb|AAC95584.1| small subunit of ribonucleotide reductase [Ateline herpesvirus 3]
          Length = 305

 Score = 56.4 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 47/122 (38%), Gaps = 8/122 (6%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E       N W P++VP+Q D+      + L + +    K    F   +E LV  NI   
Sbjct: 18  ELTKETWKNRWFPSQVPLQGDV---CCVDLLNERDIEFYKFLFTFLGMAEKLVNINI-ED 73

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE-GELFNMYREVP---SITAKA 159
           +     + +   Y   Q   E +H   +  I+  L  +   E+++   ++    ++  K 
Sbjct: 74  LLGQFESHDISHYYAEQMAMENIHGKVYANILNMLFKNNITEVYSYAHDIMNDCALQEKI 133

Query: 160 NW 161
            W
Sbjct: 134 RW 135


>gi|1172944|sp|P06474|RIR2_HHV1K RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase 38 kDa subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|807641|gb|AAA66436.1| unknown protein [Human herpesvirus 1]
          Length = 340

 Score = 56.4 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 44/126 (34%), Gaps = 8/126 (6%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                    +  N W+ TE+     +   +  + L++ E    +    F ++++ LV  N
Sbjct: 44  PDINHLRSLSILNRWLETELVF---VGDEEDVSKLSEGELSFYRFLFAFLSAADDLVTEN 100

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD----EGELFNMYREVPSI 155
           +   +       +   Y + Q   E  HS  +  I   L  +      E        P+I
Sbjct: 101 LG-GLSGLFEQKDILHYYVEQECIEVAHSRVYNIIQLVLFHNNDQARREYVAGTINHPAI 159

Query: 156 TAKANW 161
            AK +W
Sbjct: 160 RAKVDW 165


>gi|229823057|ref|ZP_04449126.1| hypothetical protein GCWU000282_00352 [Catonella morbi ATCC 51271]
 gi|229787496|gb|EEP23610.1| hypothetical protein GCWU000282_00352 [Catonella morbi ATCC 51271]
          Length = 336

 Score = 56.4 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 10/121 (8%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           WEK        W+ T +P+ +DL  W++   L+  ER ++ +  G     ++L +     
Sbjct: 39  WEKLTEQ---FWLDTRIPVSNDLDDWRT---LSMAERDVVAKAFGGLTLLDTLQSEEGAA 92

Query: 103 AIYRHL-SNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKA 159
            +   + +  E   +   Q F E+VH+ ++  I ++L       E+F        +  KA
Sbjct: 93  LMKDFVRTQHEEAVWNNIQ-FMESVHAKSYSTIFSTLNTKAEIEEIFEWTNTNEQLQYKA 151

Query: 160 N 160
            
Sbjct: 152 K 152


>gi|270614678|ref|ZP_06221723.1| ribonucleoside-diphosphate reductase, beta subunit [Haemophilus
           influenzae HK1212]
 gi|270317993|gb|EFA29282.1| ribonucleoside-diphosphate reductase, beta subunit [Haemophilus
           influenzae HK1212]
          Length = 103

 Score = 56.4 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 3/97 (3%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
           K   + +        +V +    KY    +      +  W P EV +  D   +     L
Sbjct: 10  KNDQLKEPMFFGQNVNVARYDQQKYETFEKLIEKQLSFFWRPEEVDVSQDRIDYA---AL 66

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNP 111
            + E+ +   NL +    +S+   +  +A+   +S P
Sbjct: 67  PEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSIP 103


>gi|144575330|gb|AAZ53597.2| ribonucleoside-diphosphate reductase beta chain [Mycoplasma
           hyopneumoniae 7448]
          Length = 314

 Score = 56.4 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 52/126 (41%), Gaps = 7/126 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN-NIVL 102
           E +     N W+P ++P+ +DL  W++   L+   + ++ R        +++ A    V 
Sbjct: 16  EVWTRIVQNFWIPEKIPLSNDLESWRT---LSPTWKKVVTRTFTGLTLLDTIQATIGDVA 72

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
            I   L++ E +      AF   VH+ ++  I ++L   E   E  N       +  +A 
Sbjct: 73  QIKHSLTDHE-QVIYTNFAFMVGVHARSYGSIFSTLCSSEEIEEAHNWVINNEKLQKRAR 131

Query: 161 WALQYT 166
             + + 
Sbjct: 132 ILIPFY 137


>gi|227529511|ref|ZP_03959560.1| ribonucleoside-diphosphate reductase [Lactobacillus vaginalis ATCC
           49540]
 gi|227350596|gb|EEJ40887.1| ribonucleoside-diphosphate reductase [Lactobacillus vaginalis ATCC
           49540]
          Length = 339

 Score = 56.4 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 60/161 (37%), Gaps = 11/161 (6%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           + N++  +     WEK        W+ T +P+ +DL  W+    L  D +  +    G  
Sbjct: 16  NWNEVSDMIDKATWEKLTEQ---FWLDTRIPVSNDLDDWRE---LDTDHQWTVGHVFGGL 69

Query: 90  ASSESLVANNIVLAIYRHL-SNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELF 146
              +++ +   + A+ + + +  E       Q F E+VH+ ++  I ++L   E   E+F
Sbjct: 70  TLLDTVQSEAGLTALKQDVKTQHETAVLNNIQ-FMESVHAKSYSTIFSTLNTPEEINEIF 128

Query: 147 NMYREVPSITAKA-NWALQYTQTLSSPSFHYWNKRRRSRIL 186
           +       +  KA   A  Y      P             L
Sbjct: 129 DWSDSEEYLQNKAVQIANIYRNPEEDPLKKKVANVFLETFL 169


>gi|22550280|gb|AAN01603.1| ribonucleotide reductase small subunit [Human herpesvirus 2 strain
           G]
          Length = 342

 Score = 56.4 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 46/126 (36%), Gaps = 5/126 (3%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                    +  N W+ TE  +       +  + L++ E    +    F ++++ LV  N
Sbjct: 41  PDINHLRSLSILNRWLETETELVFVGDEEEDVSKLSEGELGFYRFLFAFLSAADDLVTEN 100

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMY--REV--PSI 155
           +   +       +   Y + Q   E VHS  +  I   L  +  +    Y  R +  P+I
Sbjct: 101 LG-GLSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFHNNDQARRAYVARTITHPAI 159

Query: 156 TAKANW 161
             K +W
Sbjct: 160 RVKVDW 165


>gi|240168452|ref|ZP_04747111.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           kansasii ATCC 12478]
          Length = 314

 Score = 56.4 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 10/119 (8%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           + +       W P ++    +   W   + LTD ER    R    F + E  V  +I   
Sbjct: 22  KLFAGGNAKFWDPADIDFSREREDW---DRLTDTERDYAIRLCAQFVAGEEAVTEDI-QP 77

Query: 104 IYRHLSNPECR----QYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAK 158
               +   E R     YL + AFEEA H+  F+  + S+G+  G+L     ++PS    
Sbjct: 78  FMAAMRA-EGRLADEMYLTQFAFEEAKHTQVFRMWLDSVGV-TGDLHGYLDDLPSYRQM 134


>gi|15829010|ref|NP_326370.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma
           pulmonis UAB CTIP]
 gi|14089954|emb|CAC13712.1| RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE BETA CHAIN (RIBONUCLEOTIDE
           REDUCTASE) [Mycoplasma pulmonis]
          Length = 341

 Score = 56.4 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 53/149 (35%), Gaps = 15/149 (10%)

Query: 25  LNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR 84
              +        +      E +   C N W+P ++P+ +DL  W+S   L    + +I R
Sbjct: 24  FRGKMRSVNWNKIDDEKDLEVWNRVCQNFWLPEKIPVSNDLETWRS---LDPIWQKVITR 80

Query: 85  NLGFFASSESLVAN-----NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
                   +++ A       +  ++  H      +      AF  A+H+ ++  I ++L 
Sbjct: 81  TFTGLTLLDTIQATIGDIAQLPHSLTDH-----EQVIYTNFAFMVAIHARSYGTIFSTLC 135

Query: 140 LDE--GELFNMYREVPSITAKANWALQYT 166
             E   E         S+  +A   + + 
Sbjct: 136 STEQINEAHEWVINTKSLQDRAKILIPFY 164


>gi|240047145|ref|YP_002960533.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma
           conjunctivae HRC/581]
 gi|239984717|emb|CAT04689.1| Ribonucleoside-diphosphate reductase beta chai [Mycoplasma
           conjunctivae]
          Length = 344

 Score = 56.4 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 50/127 (39%), Gaps = 6/127 (4%)

Query: 25  LNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKR 84
              +        +      E +     N W+P ++P+ +DL  W+S   L+   + +I R
Sbjct: 27  FQGKMRSVNWNVINDPKDLEVWNRVVQNFWIPEKIPVSNDLDTWRS---LSPVWQRLITR 83

Query: 85  NLGFFASSESLVAN-NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
                   +++ A    V  I   L++ E +      AF   VH+ ++  I ++L   E 
Sbjct: 84  TFTGLTLLDTIQATIGDVAQIQHSLTDHE-QVIYANFAFMVGVHARSYGTIFSTLCTSE- 141

Query: 144 ELFNMYR 150
           E+   + 
Sbjct: 142 EIEEAHE 148


>gi|327440682|dbj|BAK17047.1| ribonucleotide reductase, beta subunit [Solibacillus silvestris
           StLB046]
          Length = 294

 Score = 56.4 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 39/104 (37%), Gaps = 6/104 (5%)

Query: 43  WEKYLSACN-NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
           +  Y  A     W P ++    D   WK    L ++++L +      F   E  V  +I+
Sbjct: 18  YNLYQKAKKFGIWNPVDIDFTQDKEDWKK---LNEEQQLEVLTQFAQFIGGEEAVTQDIL 74

Query: 102 LAIYRHLSN--PECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
             I         E   YL    FEEA H+  F   +  +G+ + 
Sbjct: 75  PMIMAVSKKGWFEEESYLTTFLFEEAKHAEFFSLFLEEIGVKDD 118


>gi|296169397|ref|ZP_06851020.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           parascrofulaceum ATCC BAA-614]
 gi|295895947|gb|EFG75639.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           parascrofulaceum ATCC BAA-614]
          Length = 313

 Score = 56.0 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 9/99 (9%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W P  +    D A W+    L+D ER+ + R    F + E  V  +I    
Sbjct: 23  LFAGGIAKLWDPANIDFSRDSADWE---ALSDRERVYVTRLCAGFIAGEEAVTQDI-QPF 78

Query: 105 YRHLSNPECR----QYLLRQAFEEAVHSHTFQYIITSLG 139
              +   E R     YL + AFEEA H+  F+  + ++G
Sbjct: 79  MAAMRA-EGRLGDEMYLTQFAFEEAKHTQAFRLWLDAVG 116


>gi|167837964|ref|ZP_02464823.1| ribonucleotide-diphosphate reductase subunit beta [Burkholderia
          thailandensis MSMB43]
          Length = 70

 Score = 56.0 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/49 (55%), Positives = 33/49 (67%)

Query: 1  MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSA 49
           A     S   A E RVNV DKR++N ++DVNQL+P KY WAWEKYL+ 
Sbjct: 22 FAVAPNASAAVASEARVNVADKRIINGKTDVNQLVPFKYKWAWEKYLAG 70


>gi|109290088|ref|YP_656337.1| hypothetical protein PHG25ORF102c [Aeromonas phage 25]
 gi|104345761|gb|ABF72661.1| hypothetical protein PHG25ORF102c [Aeromonas phage 25]
          Length = 332

 Score = 56.0 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 50/141 (35%), Gaps = 11/141 (7%)

Query: 37  LKYGWAWEKYLSACNNHWMPTE--VPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
           +KY    +      +  W   E  V   +D+   ++K  LT  E   I   L  F   E 
Sbjct: 19  IKYPEFGKLADEQMHAFWPWDEPVVD--NDIQDLRTK--LTPGELNGITTVLKLFTIYER 74

Query: 95  LVANNI-VLAIYRHLSNPECRQYLLRQAFEE-AVHSHTFQYIITSLGLDEGELFNMYREV 152
            V  +     I      PE  +     +  E   H+  +  +   L LD+   +  ++E 
Sbjct: 75  KVGEDYWSGRIAHTFGRPEINRMATLFSAVEGNSHAPFYNKVNEVLYLDDEAFYTSWKES 134

Query: 153 PSITAKANWALQYTQTLSSPS 173
             ++ +  +  +   +++ P 
Sbjct: 135 EELSRRIQFVGK---SVNDPD 152


>gi|68161126|gb|AAY86994.1| ribonucleotide reductase M2b [Ictalurus punctatus]
          Length = 192

 Score = 56.0 bits (134), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 23/66 (34%), Gaps = 15/66 (22%)

Query: 132 QYIITSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
             +I +   D  E   LFN    +P +  KA+WALQ+                 S    R
Sbjct: 1   SLLINTYIRDLKERDYLFNAIETLPYVKRKADWALQWI------------SDTNSTFAER 48

Query: 189 SLRFLC 194
            + F  
Sbjct: 49  LVAFAA 54


>gi|295397108|ref|ZP_06807219.1| ribonucleotide-diphosphate reductase subunit beta [Aerococcus
           viridans ATCC 11563]
 gi|294974650|gb|EFG50366.1| ribonucleotide-diphosphate reductase subunit beta [Aerococcus
           viridans ATCC 11563]
          Length = 338

 Score = 55.6 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 46/116 (39%), Gaps = 5/116 (4%)

Query: 46  YLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIY 105
           +    +  W+ T +P+ +D   W+    LT +ER ++ +      + ++L +      + 
Sbjct: 42  WEKLTSQFWLDTRIPVSNDRDDWR---ILTKEERDVVNKAFAGLTALDTLQSEEGANVMR 98

Query: 106 RHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKA 159
             +        L    F E+VH+ ++  I  SL       E+F+       +  KA
Sbjct: 99  DAVRTQHEEAVLNNILFMESVHAKSYSTIFISLNTTREIDEIFDWANNNEYLQYKA 154


>gi|326783253|ref|YP_004323801.1| ribonucleotide reductase A subunit [Prochlorococcus phage Syn33]
 gi|310005200|gb|ADO99589.1| ribonucleotide reductase A subunit [Prochlorococcus phage Syn33]
          Length = 296

 Score = 55.6 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 32/68 (47%)

Query: 92  SESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYRE 151
            +S+      +A   + S PE    +L   F E +HS ++ YII ++  D  E+F+   E
Sbjct: 2   LDSVQGRGPGMAFIPYCSLPELEASMLVWEFMEMIHSRSYTYIIKNVYPDPSEVFDTILE 61

Query: 152 VPSITAKA 159
              I  +A
Sbjct: 62  DEKILDRA 69


>gi|256848140|ref|ZP_05553584.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           coleohominis 101-4-CHN]
 gi|256715200|gb|EEU30177.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           coleohominis 101-4-CHN]
          Length = 333

 Score = 55.6 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 55/133 (41%), Gaps = 10/133 (7%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           + N++  +     WEK        W+ T +P+ +DL  W+    L  D +  +    G  
Sbjct: 10  NWNEVSDMIDKATWEKLTEQ---FWLDTRIPVSNDLDDWRE---LDTDHQWTVGHVFGGL 63

Query: 90  ASSESLVANNIVLAIYRHL-SNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG--ELF 146
              ++L +   + A+   + +  E       Q F E+VH+ ++  I ++L   +   E+F
Sbjct: 64  TLLDTLQSQAGLTALKEDVKTQHETAVLNNIQ-FMESVHAKSYSTIFSTLNTPDEIREIF 122

Query: 147 NMYREVPSITAKA 159
           +       +  KA
Sbjct: 123 DWSDSEEYLQNKA 135


>gi|219681363|ref|YP_002456127.1| putative ribonucleoside diphosphate reductase beta chain [Erwinia
           phage phiEa21-4]
 gi|327198492|ref|YP_004327080.1| ribonucleoside diphosphate reductase beta chain [Erwinia phage
           phiEa104]
 gi|199580630|gb|ACH89017.1| putative ribonucleoside diphosphate reductase beta chain [Erwinia
           phage phiEa21-4]
 gi|311875188|emb|CBX44448.1| ribonucleoside diphosphate reductase beta chain [Erwinia phage
           phiEa104]
          Length = 365

 Score = 55.6 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 49/120 (40%), Gaps = 3/120 (2%)

Query: 39  YGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN 98
           Y   ++ Y       W   EV +++    +++       E  +   NL +   ++S V+ 
Sbjct: 36  YPELFDLYKQQKAQDWSEDEVNLENSRIDFQTAAK---SEIEVCIENLLWQWEADSRVSR 92

Query: 99  NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAK 158
           NI+  +   +SN E    + +Q   E +H+ T+  I+     D  E+     +  ++  +
Sbjct: 93  NIITLLAPFISNNEFAAMVTKQTEIENLHALTYSEIVRQCISDPTEMIKRVMDNQAVLDR 152


>gi|85057306|ref|YP_456222.1| ribonucleotide-diphosphate reductase subunit beta [Aster yellows
           witches'-broom phytoplasma AYWB]
 gi|84789411|gb|ABC65143.1| ribonucleoside-diphosphate reductase beta chain [Aster yellows
           witches'-broom phytoplasma AYWB]
          Length = 350

 Score = 55.6 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 55/142 (38%), Gaps = 14/142 (9%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY      Y    +  W P ++ +Q DLA W   + LT +E+    RNL      ++   
Sbjct: 27  KYTHF--FYEQNLSQFWRPEDISLQGDLAAW---SELTIEEKTAYSRNLLVLTFLDTYQG 81

Query: 98  NNIVLAIYRHLSNPE-----CRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYR 150
           +  +  I R L   E        ++   A E AVH+ ++  I  S   ++   +LF    
Sbjct: 82  DLGMPIIARSLEEHEHQKKATLNFMG--AMENAVHAKSYSNIFMSYLTNKEINQLFLWGN 139

Query: 151 EVPSITAKANWALQYTQTLSSP 172
           +  S+       ++  + L   
Sbjct: 140 QQKSLQTMMQVIVKVYEALEDQ 161


>gi|39938541|ref|NP_950307.1| ribonucleotide-diphosphate reductase subunit beta [Onion yellows
           phytoplasma OY-M]
 gi|39721650|dbj|BAD04140.1| ribonucleotide reductase beta subunit [Onion yellows phytoplasma
           OY-M]
          Length = 350

 Score = 55.6 bits (133), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 55/142 (38%), Gaps = 14/142 (9%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           KY      Y    +  W P ++ +Q DLA W   + LT +E+    RNL      ++   
Sbjct: 27  KYTHF--FYEQNLSQFWRPEDISLQGDLAAW---SELTLEEKTAYSRNLLVLTFLDTYQG 81

Query: 98  NNIVLAIYRHLSNPE-----CRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYR 150
           +  +  I R L   E        ++   A E AVH+ ++  I  S   ++   +LF    
Sbjct: 82  DLGMPVIARSLEEHEHQKKATLNFMG--AMENAVHAKSYSNIFMSYLTNKEINQLFLWGN 139

Query: 151 EVPSITAKANWALQYTQTLSSP 172
           +  S+       ++  + L   
Sbjct: 140 QQTSLQTMMQVIVKVYEALEDQ 161


>gi|37651592|ref|NP_932466.1| hypothetical protein 44RRORF111c [Aeromonas phage 44RR2.8t]
 gi|66391913|ref|YP_238838.1| hypothetical protein PHG31p109 [Aeromonas phage 31]
 gi|34732892|gb|AAQ81430.1| hypothetical protein 44RRORF111c [Aeromonas phage 44RR2.8t]
 gi|62114750|gb|AAX63598.1| hypothetical protein PHG31p109 [Aeromonas phage 31]
          Length = 323

 Score = 55.2 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 49/141 (34%), Gaps = 11/141 (7%)

Query: 37  LKYGWAWEKYLSACNNHWMPTE--VPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
           ++Y           +  W   E  V   +D    ++K  LT  E   I   L  F   E 
Sbjct: 10  IRYPEFAALADEQMHAFWPWDEPVVD--NDAQDLRTK--LTPGELNGITTVLKLFTIYER 65

Query: 95  LVANNI-VLAIYRHLSNPECRQYLLRQAFEE-AVHSHTFQYIITSLGLDEGELFNMYREV 152
            V  +     I R    PE  +     +  E   H+  +  +   L LD+   +  ++E 
Sbjct: 66  KVGEDYWTGRIARTFGRPEINRMATLFSAVEGNSHAPFYNKVNEVLYLDDEAFYTSWKES 125

Query: 153 PSITAKANWALQYTQTLSSPS 173
             ++ +  +  +   ++S P 
Sbjct: 126 EELSRRIQFVGK---SVSDPD 143


>gi|312140626|ref|YP_004007962.1| ribonucleoside-diphosphate reductase nrdb [Rhodococcus equi 103S]
 gi|325675746|ref|ZP_08155430.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus equi
           ATCC 33707]
 gi|311889965|emb|CBH49283.1| ribonucleoside-diphosphate reductase NrdB [Rhodococcus equi 103S]
 gi|325553717|gb|EGD23395.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus equi
           ATCC 33707]
          Length = 323

 Score = 55.2 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 40/101 (39%), Gaps = 9/101 (8%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            ++      W P ++    D   W S   LT +E+         F + E  V  +I    
Sbjct: 28  LFVKGNAKFWNPADIDFTQDAEDWAS---LTSEEKRSSTYLCTQFIAGEEAVTEDI-QPF 83

Query: 105 YRHLSNPECR----QYLLRQAFEEAVHSHTFQYIITSLGLD 141
            + +   E R     YL +  FEEA H   F+  + ++GLD
Sbjct: 84  MKAM-AAEGRFNDEMYLTQFCFEEAKHVQVFRRWMDAVGLD 123


>gi|209523560|ref|ZP_03272114.1| ribonucleoside-diphosphate reductase beta chain [Arthrospira maxima
           CS-328]
 gi|209495965|gb|EDZ96266.1| ribonucleoside-diphosphate reductase beta chain [Arthrospira maxima
           CS-328]
          Length = 107

 Score = 55.2 bits (132), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 34/81 (41%), Gaps = 3/81 (3%)

Query: 117 LLRQAFEEAVHSHTFQYIITSLGLDEGE--LFNMYREVPSITAKANWALQ-YTQTLSSPS 173
           +  Q  +E +H+ ++QY+I ++   E    +++ +R    +  +  +    Y + +  P+
Sbjct: 1   MAEQISQEGMHNQSYQYMIETIIPSERRNYVYDFWRTDKVLRDRCEFIAGLYQEYVDDPT 60

Query: 174 FHYWNKRRRSRILTRSLRFLC 194
              +     +  L   + F  
Sbjct: 61  PENYFVSLMADYLLEGMYFYN 81


>gi|197294249|ref|YP_001798790.1| ribonucleotide-diphosphate reductase subunit beta [Candidatus
           Phytoplasma australiense]
 gi|171853576|emb|CAM11447.1| Ribonucleotide reductase, beta subunit [Candidatus Phytoplasma
           australiense]
          Length = 344

 Score = 54.9 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 42/102 (41%), Gaps = 6/102 (5%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            Y    +  W P ++ +Q DLA W   N L+D+E+    RNL      ++   +  +  I
Sbjct: 25  FYEQNLSQFWRPEDISLQGDLAAW---NHLSDEEKTTYTRNLLVLTFLDTYQGDLGIPVI 81

Query: 105 YRHLSNP--ECRQYLLRQAFEEA-VHSHTFQYIITSLGLDEG 143
              +     + +  L      E  VH+ ++  I TS   +E 
Sbjct: 82  ANSMDENKHQKKATLNFMGAMENAVHAKSYSNIFTSYLSNED 123


>gi|301331892|gb|ADK70922.1| U27.5 [Elephant endotheliotropic herpesvirus 2]
          Length = 301

 Score = 54.9 bits (131), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 54/131 (41%), Gaps = 8/131 (6%)

Query: 41  WAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNI 100
              + Y +   N W+  ++     L  +K    L +  +   K    F   +E LV  N+
Sbjct: 12  DFRQLYRTVTENRWLEGQISF---LNDYKHILLLDEKTKEYYKFIFCFLGMAEHLVNFNL 68

Query: 101 VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITS-LGLDEGELF---NMYREVPSIT 156
              I R L +P+   Y + Q   E VH+ T++ I+      DE  +    + Y + P++ 
Sbjct: 69  FDMIER-LEDPDVIHYYIEQMSIECVHARTYRRILNIFYDNDEKAIMCAADFYLKDPALL 127

Query: 157 AKANWALQYTQ 167
            K ++  +  +
Sbjct: 128 KKISFLEKTIR 138


>gi|330718304|ref|ZP_08312904.1| ribonucleotide-diphosphate reductase subunit beta [Leuconostoc
           fallax KCTC 3537]
          Length = 326

 Score = 54.9 bits (131), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 51/122 (41%), Gaps = 12/122 (9%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN-IV 101
           WEK        W+ T VP+ +DL  W+     + +E+ ++    G   + ++L + + + 
Sbjct: 26  WEKLTQQ---FWLDTRVPISNDLRNWRDT---SAEEKKVLNLVFGGLTTLDTLQSQDGMA 79

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL---FNMYREVPSITAK 158
                 ++  E       Q F E+VH+ ++  I  +L  D+ E+   F        +  K
Sbjct: 80  ELKKDAVNQKEEAVLNNIQ-FMESVHAKSYSSIFETLN-DKAEIEAVFEWADNDEYLQYK 137

Query: 159 AN 160
           A 
Sbjct: 138 AQ 139


>gi|254362523|ref|ZP_04978626.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia
           haemolytica PHL213]
 gi|153094123|gb|EDN75022.1| ribonucleoside-diphosphate reductase beta subunit [Mannheimia
           haemolytica PHL213]
          Length = 293

 Score = 54.5 bits (130), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 46/116 (39%), Gaps = 7/116 (6%)

Query: 57  TEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA-NNIVLAIYRHLSNPECRQ 115
           TE     D+  +++   + D ER ++ R +   A S+  V        +Y +   PE   
Sbjct: 3   TEFNFTGDIQDYRT--TINDHERHVLTRAM--LAISQVEVNVKRFWGELYCYFPKPEMDD 58

Query: 116 YLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSS 171
                A  E  H   + +++  LGL   E+F+   E+  +  +  +   + +   +
Sbjct: 59  VGGTFAESEVRHKDAYSFLLEKLGL--NEMFSQIHEIEPLMNRIRYMESFMKDKDA 112


>gi|12045084|ref|NP_072895.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma
           genitalium G37]
 gi|255660230|ref|ZP_05405639.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma
           genitalium G37]
 gi|1350602|sp|P47471|RIR2_MYCGE RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|3844832|gb|AAC71450.1| ribonucleoside-diphosphate reductase, beta chain [Mycoplasma
           genitalium G37]
 gi|166078981|gb|ABY79599.1| ribonucleoside-diphosphate reductase, beta chain [synthetic
           Mycoplasma genitalium JCVI-1.0]
          Length = 340

 Score = 54.5 bits (130), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 54/127 (42%), Gaps = 9/127 (7%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN-NIVL 102
           E +     N W+P ++P+ +D+  WK    L+ D + +I +        +++ A    + 
Sbjct: 42  EVWNRIVQNFWLPEKIPVSNDIPSWKK---LSKDWQDLITKTFTGLTLLDTIQATIGDIC 98

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYR---EVPSITAKA 159
            I   L++ E +      AF   VH+ ++  I ++L   E ++   +       S+  +A
Sbjct: 99  QIDHALTDHE-QVIYANFAFMVGVHARSYGTIFSTLCTSE-QINAAHEWVVNTESLQKRA 156

Query: 160 NWALQYT 166
              + Y 
Sbjct: 157 KALIPYY 163


>gi|13508061|ref|NP_110010.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma
           pneumoniae M129]
 gi|2500211|sp|P75461|RIR2_MYCPN RecName: Full=Ribonucleoside-diphosphate reductase subunit beta;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|1674208|gb|AAB96162.1| ribonucleoside-diphosphate reductase beta chain [Mycoplasma
           pneumoniae M129]
 gi|301633274|gb|ADK86828.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma
           pneumoniae FH]
          Length = 339

 Score = 54.5 bits (130), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 49/125 (39%), Gaps = 5/125 (4%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P ++P+ +D+  WK    L+ + + +I +        +++ A    + 
Sbjct: 41  EVWNRITQNFWLPEKIPVSNDIPSWKQ---LSKEWQDLITKTFTGLTLLDTIQATIGDIK 97

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG--ELFNMYREVPSITAKANW 161
              +      +      AF   VH+ ++  I ++L   E   E      +  S+  +A  
Sbjct: 98  QIDYALTDHEQVIYANFAFMVGVHARSYGTIFSTLCTSEQITEAHEWVVKTESLQKRAKA 157

Query: 162 ALQYT 166
            + Y 
Sbjct: 158 LIPYY 162


>gi|116617385|ref|YP_817756.1| ribonucleotide-diphosphate reductase subunit beta [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
 gi|116096232|gb|ABJ61383.1| ribonucleoside-diphosphate reductase class Ib beta subunit
           [Leuconostoc mesenteroides subsp. mesenteroides ATCC
           8293]
          Length = 325

 Score = 54.5 bits (130), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 55/140 (39%), Gaps = 4/140 (2%)

Query: 23  RMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMI 82
            + N          ++       +       W+ T +P+ +DL  W+    +++ ER  +
Sbjct: 3   HINNGSYTAINWNNIEDELDKATWEKLTQQFWLDTRIPISNDLRTWR--GNMSEQERQTM 60

Query: 83  KRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--L 140
               G   + ++L + + +  +    +N +    L    F E+VH+ ++  I  +L   +
Sbjct: 61  NLVFGGLTTLDTLQSQDGMAQLKLDATNQKEEAVLNNIQFMESVHAKSYSSIFETLNEKV 120

Query: 141 DEGELFNMYREVPSITAKAN 160
           +  ++F        +  KAN
Sbjct: 121 EIEKIFEWADSNEFLQYKAN 140


>gi|227431268|ref|ZP_03913322.1| ribonucleotide-diphosphate reductase subunit beta [Leuconostoc
           mesenteroides subsp. cremoris ATCC 19254]
 gi|227353030|gb|EEJ43202.1| ribonucleotide-diphosphate reductase subunit beta [Leuconostoc
           mesenteroides subsp. cremoris ATCC 19254]
          Length = 327

 Score = 54.5 bits (130), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 55/140 (39%), Gaps = 4/140 (2%)

Query: 23  RMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMI 82
            + N          ++       +       W+ T +P+ +DL  W+    +++ ER  +
Sbjct: 5   HINNGSYTAINWNNIEDELDKATWEKLTQQFWLDTRIPISNDLRTWR--GNMSEQERQTM 62

Query: 83  KRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG--L 140
               G   + ++L + + +  +    +N +    L    F E+VH+ ++  I  +L   +
Sbjct: 63  NLVFGGLTTLDTLQSQDGMAQLKLDATNQKEEAVLNNIQFMESVHAKSYSSIFETLNEKV 122

Query: 141 DEGELFNMYREVPSITAKAN 160
           +  ++F        +  KAN
Sbjct: 123 EIEKIFEWADSNEFLQYKAN 142


>gi|226365685|ref|YP_002783468.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus
           opacus B4]
 gi|226244175|dbj|BAH54523.1| hypothetical protein [Rhodococcus opacus B4]
          Length = 324

 Score = 54.1 bits (129), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 44/113 (38%), Gaps = 15/113 (13%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
            PL+       +       W PT++    D   W+   GL  +++      +  F + E 
Sbjct: 30  FPLR------LFTKGNAKFWNPTDLDFSRDAEDWE---GLNSEQQRNSTYLVAQFIAGEE 80

Query: 95  LVANNIVLAIYRHLSNPECR----QYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
            V  +I     + +   E R     YL +  FEEA H+  F+  + ++GL   
Sbjct: 81  AVTEDI-QPFMKAM-AAEGRFGDEMYLTQFCFEEAKHTQVFRLWMDAVGLTRD 131


>gi|111023180|ref|YP_706152.1| ribonucleotide-diphosphate reductase subunit beta [Rhodococcus
           jostii RHA1]
 gi|123045538|sp|Q0S392|RIR2H_RHOSR RecName: Full=R2-like ligand binding oxidase; AltName:
           Full=Ribonucleotide reductase R2 subunit homolog;
           AltName: Full=Ribonucleotide reductase small subunit
           homolog
 gi|110822710|gb|ABG97994.1| probable ribonucleoside-diphosphate reductase [Rhodococcus jostii
           RHA1]
          Length = 324

 Score = 54.1 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 44/113 (38%), Gaps = 15/113 (13%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
            PL+       +       W PT++    D   W+   GL  +++      +  F + E 
Sbjct: 30  FPLR------LFTKGNAKFWNPTDLDFSRDAEDWE---GLNSEQQRNSTYLVAQFIAGEE 80

Query: 95  LVANNIVLAIYRHLSNPECR----QYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
            V  +I     + +   E R     YL +  FEEA H+  F+  + ++GL   
Sbjct: 81  AVTEDI-QPFMKAM-AAEGRFGDEMYLTQFCFEEAKHTQVFRLWMDAVGLTRD 131


>gi|313902757|ref|ZP_07836155.1| ribonucleotide reductase [Thermaerobacter subterraneus DSM 13965]
 gi|313467054|gb|EFR62570.1| ribonucleotide reductase [Thermaerobacter subterraneus DSM 13965]
          Length = 349

 Score = 54.1 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 41/102 (40%), Gaps = 14/102 (13%)

Query: 32  NQLLPLKYGWAWEKYLSACN-NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
           + L P++       Y  A     W P  + +  D   W   N L D ++  + R +  FA
Sbjct: 40  HDLPPMR------LYHKAKKFGTWDPRAIDLSQDREDW---NLLNDAQKDALLRLVSLFA 90

Query: 91  SSESLVANN---IVLAIYRHLSNPECRQYLLRQAFEEAVHSH 129
           + E  V  +   +++ I R     E   +L    +EEA H+ 
Sbjct: 91  AGEESVTLDLLPLIMVIARE-GRLEEEMFLTTFLWEEAKHTE 131


>gi|317122349|ref|YP_004102352.1| ribonucleotide reductase [Thermaerobacter marianensis DSM 12885]
 gi|315592329|gb|ADU51625.1| ribonucleotide reductase [Thermaerobacter marianensis DSM 12885]
          Length = 359

 Score = 54.1 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 57/160 (35%), Gaps = 18/160 (11%)

Query: 5   TGLSPIQAGEKRVNVDDKRMLNARSDV---NQLLPLKYGWAWEKYLSACN-NHWMPTEVP 60
           TG+S    G               S     + L P++       Y  A     W P  + 
Sbjct: 4   TGVSGAADGRPVAAEARHDAFVTTSRRGLNHDLPPMR------LYHKAKKFGTWDPRAID 57

Query: 61  MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN---IVLAIYRHLSNPECRQYL 117
           ++ D   WK    L D ++  + R +  FA+ E  V  +   +++ I R     E   +L
Sbjct: 58  LRQDKEDWK---LLNDAQKDALLRLVSLFAAGEESVTLDLLPLIMVIARE-GRLEEEMFL 113

Query: 118 LRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITA 157
               +EEA H+   +  +  +    GE  + Y   PS   
Sbjct: 114 TTFLWEEAKHTEFMRRFLDEVAGVSGEDLHHYHT-PSYKK 152


>gi|134303461|ref|YP_001111330.1| ribonucleotide reductase small subunit [Gryllus bimaculatus
           nudivirus]
 gi|134022847|gb|ABO45396.1| ribonucleotide reductase small subunit [Gryllus bimaculatus
           nudivirus]
          Length = 371

 Score = 54.1 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 36/96 (37%), Gaps = 4/96 (4%)

Query: 43  WEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVL 102
           +  +L      W P E+ +  D A +       +  + +    LG  A  +++V  N+  
Sbjct: 72  YNFWLKQVALAWSPEEISLSKDKATFHRAP---EQLKKISACMLGMLAIGDNIVLQNLSD 128

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
            +   ++N      + RQ   E  HS  +   +  L
Sbjct: 129 -VSEIITNNYVLNAISRQEDVEKTHSDFYSRSLDVL 163


>gi|24943146|ref|NP_733908.1| ORF54 [Callitrichine herpesvirus 3]
 gi|13676697|gb|AAK38263.1|AF319782_57 ORF54 [callitrichine herpesvirus 3]
          Length = 302

 Score = 54.1 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 49/144 (34%), Gaps = 7/144 (4%)

Query: 51  NNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSN 110
            N W+   + +   +   +    L   +    K    F A +E LV  NI   +     +
Sbjct: 22  RNRWVAVHISL---VRDCEGVRELNPRDLEFYKFLFTFLAMAEKLVNFNI-DELLPQFCS 77

Query: 111 PECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKA-NWALQYTQTL 169
            +   Y   Q   E +H  T+  I+  L   + +    Y     I  KA    + +   +
Sbjct: 78  HDIEHYYTEQKAMENIHGETYANILNMLFDGDKKAVAQY-ADEVIADKALQAKICWLNGM 136

Query: 170 SSPSFHYWNKRRRSRILTRSLRFL 193
            + S     ++    +L   + F+
Sbjct: 137 VN-SAVTKAEKILIFLLIEGIFFI 159


>gi|50365347|ref|YP_053772.1| ribonucleotide-diphosphate reductase subunit beta [Mesoplasma
           florum L1]
 gi|50363903|gb|AAT75888.1| ribonucleoside-diphosphate reductase beta chain [Mesoplasma florum
           L1]
          Length = 340

 Score = 54.1 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 54/126 (42%), Gaps = 7/126 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN-NIVL 102
           E +     N W+P ++P+ +DL  W++   LT + + +I R        +++ A    V 
Sbjct: 42  EVWNRITQNFWLPEKIPVSNDLTSWRT---LTPEWQELITRTFTGLTLLDTIQATVGDVA 98

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
            +   L++ E +      AF  AVH+ ++  I ++L   E   E         ++  +A 
Sbjct: 99  QVPNSLTDHE-QVIYTNFAFMVAVHARSYGSIFSTLCSSEQIEEAHEWVINTETLQERAK 157

Query: 161 WALQYT 166
             + Y 
Sbjct: 158 ALIPYY 163


>gi|322411231|gb|EFY02139.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           dysgalactiae subsp. dysgalactiae ATCC 27957]
          Length = 337

 Score = 54.1 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 5/125 (4%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +DL  W+S   L +D + +I RN       +++ A    +A
Sbjct: 39  EVWNRVTQNFWLPEKVPVSNDLTSWRS---LGEDWQQLITRNYTGLTLLDTVQATVGDVA 95

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
             +H      +      AF  A+H+ ++  I ++L   E   E         S+  +A  
Sbjct: 96  QIQHSQTDHEQVIYTNFAFMVAIHARSYGTIFSTLCSSEQIEEAHEWVVSTQSLQERARV 155

Query: 162 ALQYT 166
            + Y 
Sbjct: 156 LIPYY 160


>gi|226349643|ref|YP_002776757.1| hypothetical protein ROP_pROB01-04060 [Rhodococcus opacus B4]
 gi|226245558|dbj|BAH55905.1| hypothetical protein [Rhodococcus opacus B4]
          Length = 326

 Score = 54.1 bits (129), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 9/106 (8%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
           A + +       W P  +    D   +    GL+D+E+ +       F + E  VA ++ 
Sbjct: 29  AMKLFRKGNKKFWDPEAIDFSQDAQDFA---GLSDEEKRLTCILAAHFIAGEESVAQDL- 84

Query: 102 LAIYRHLSNPECRQ----YLLRQAFEEAVHSHTFQYIITSLGLDEG 143
                 +   E R     YL +  FEEA H   F+    ++GL   
Sbjct: 85  QPFMSAM-AAEGRLADEAYLTQFTFEEAKHMQAFRLWFDAVGLSSD 129


>gi|82503214|ref|YP_401656.1| BaRF1 [Human herpesvirus 4]
 gi|139424488|ref|YP_001129453.1| BaRF1 [Human herpesvirus 4 type 2]
 gi|238055355|sp|P0CAP6|RIR2_EBVB9 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase 38 kDa subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|238055356|sp|P0CAP7|RIR2_EBVA8 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase 38 kDa subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|238055357|sp|P0C701|RIR2_EBVG RecName: Full=Ribonucleoside-diphosphate reductase small chain;
           AltName: Full=Ribonucleotide reductase 38 kDa subunit;
           AltName: Full=Ribonucleotide reductase small subunit
 gi|1334857|emb|CAA24843.1| unnamed protein product [Human herpesvirus 4]
 gi|23893602|emb|CAD53406.1| ribonucleoside-diphosphate reductase small chain [Human herpesvirus
           4]
 gi|64173256|gb|AAY41106.1| unknown [Human herpesvirus 4]
 gi|82703964|gb|ABB89233.1| BaRF1 [Human herpesvirus 4]
          Length = 302

 Score = 53.7 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 42/118 (35%), Gaps = 14/118 (11%)

Query: 51  NNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSN 110
            N W    + +  D    K    L + +    K    F A +E LV  NI       +++
Sbjct: 22  RNRWFAAHIVLTKDCGCLK---LLNERDLEFYKFLFTFLAMAEKLVNFNIDE----LVTS 74

Query: 111 PE---CRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYRE----VPSITAKANW 161
            E      Y   Q   E VH  T+  I+  L   +    N Y E      ++ AK +W
Sbjct: 75  FESHDIDHYYTEQKAMENVHGETYANILNMLFDGDRAAMNAYAEAIMADEALQAKISW 132


>gi|269123322|ref|YP_003305899.1| Ribonucleoside-diphosphate reductase [Streptobacillus moniliformis
           DSM 12112]
 gi|268314648|gb|ACZ01022.1| Ribonucleoside-diphosphate reductase [Streptobacillus moniliformis
           DSM 12112]
          Length = 333

 Score = 53.7 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 5/131 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W+ TE     D+  W S   L+ + R   K+ LG     ++L ++  +  I
Sbjct: 22  FWEQNLRQFWIDTEYIPSKDIDSWHS---LSPEMRETYKKVLGGLTLLDTLQSHTGMPKI 78

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             H+ + +CR  L      E++H+ ++  I T++   E   E+F   ++   +  KAN  
Sbjct: 79  IDHIESLQCRSVLSYMCMMESIHAKSYSTIFTTVASTEEINEIFRWVQDNQYLQFKANKI 138

Query: 163 LQYTQTLSSPS 173
            +Y Q L++P+
Sbjct: 139 DEYYQCLNNPN 149


>gi|145223648|ref|YP_001134326.1| ribonucleotide-diphosphate reductase subunit beta [Mycobacterium
           gilvum PYR-GCK]
 gi|315443974|ref|YP_004076853.1| ribonucleotide reductase subunit beta [Mycobacterium sp. Spyr1]
 gi|238055306|sp|A4TB76|RIR2H_MYCGI RecName: Full=R2-like ligand binding oxidase; AltName:
           Full=Ribonucleotide reductase R2 subunit homolog;
           AltName: Full=Ribonucleotide reductase small subunit
           homolog
 gi|145216134|gb|ABP45538.1| putative ribonucleoside-diphosphate reductase (beta chain)
           [Mycobacterium gilvum PYR-GCK]
 gi|315262277|gb|ADT99018.1| ribonucleotide reductase, beta subunit [Mycobacterium sp. Spyr1]
          Length = 312

 Score = 53.7 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 9/103 (8%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W P ++    D A W+S   L+  ER    R    F + E  V  +I    
Sbjct: 23  LFAGGNAKFWDPADIDFSRDRADWES---LSTMERDWATRLCAEFIAGEEAVTQDI-QPF 78

Query: 105 YRHLSNPECR----QYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
              +   E R     YL + AFEEA H+  F+  + ++G+ E 
Sbjct: 79  MAAMRA-EGRLGDEMYLTQFAFEEAKHTQVFRMWLDAVGITED 120


>gi|25010526|ref|NP_734921.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           agalactiae NEM316]
 gi|23094879|emb|CAD46097.1| unknown [Streptococcus agalactiae NEM316]
          Length = 336

 Score = 53.7 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 3/95 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P ++P+ +DL  W++   L  D + +I R        +S+ A    +A
Sbjct: 38  EVWNRVTQNFWLPEKIPVSNDLNSWRT---LDADWQQLITRTFTGLTLLDSVQATVGDIA 94

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
             +H      +      AF  A+H+ ++  I ++L
Sbjct: 95  QIKHSQTDHEQVIYANFAFMVAIHARSYGTIFSTL 129


>gi|22536601|ref|NP_687452.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           agalactiae 2603V/R]
 gi|76788476|ref|YP_329136.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           agalactiae A909]
 gi|76798641|ref|ZP_00780867.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae 18RS21]
 gi|77406064|ref|ZP_00783140.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae H36B]
 gi|77407720|ref|ZP_00784475.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae COH1]
 gi|77411308|ref|ZP_00787657.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae CJB111]
 gi|77414130|ref|ZP_00790296.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae 515]
 gi|22533438|gb|AAM99324.1|AE014211_1 ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           agalactiae 2603V/R]
 gi|76563533|gb|ABA46117.1| ribonucleoside-diphosphate reductase 2, beta subunit [Streptococcus
           agalactiae A909]
 gi|76586006|gb|EAO62538.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae 18RS21]
 gi|77159800|gb|EAO70945.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae 515]
 gi|77162644|gb|EAO73606.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae CJB111]
 gi|77173719|gb|EAO76833.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae COH1]
 gi|77175344|gb|EAO78137.1| ribonucleoside-diphosphate reductase, beta subunit [Streptococcus
           agalactiae H36B]
 gi|319744439|gb|EFV96796.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           agalactiae ATCC 13813]
          Length = 336

 Score = 53.7 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 3/95 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P ++P+ +DL  W++   L  D + +I R        +S+ A    +A
Sbjct: 38  EVWNRVTQNFWLPEKIPVSNDLNSWRT---LDADWQQLITRTFTGLTLLDSVQATVGDIA 94

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
             +H      +      AF  A+H+ ++  I ++L
Sbjct: 95  QIKHSQTDHEQVIYANFAFMVAIHARSYGTIFSTL 129


>gi|57867410|ref|YP_189075.1| ribonucleotide-diphosphate reductase subunit beta [Staphylococcus
           epidermidis RP62A]
 gi|57638068|gb|AAW54856.1| ribonucleoside-diphosphate reductase 2, beta subunit
           [Staphylococcus epidermidis RP62A]
          Length = 340

 Score = 53.3 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 44/116 (37%), Gaps = 9/116 (7%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV-ANNI 100
           A   +       W   E     DL++WK+   L+ DE+    + L      ++      +
Sbjct: 19  ALTYWKQNVKQMWTEEEFKPSKDLSVWKT---LSADEQETYVKALSGLTGLDTTQGTEGM 75

Query: 101 VLAIYRHLSNPEC--RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPS 154
            L  + +   PE   R      +  E +H  ++ +I TSL   +   + +   VP+
Sbjct: 76  PLLAFHY---PEEIWRGVFAFMSMMENIHHKSYSHIFTSLLERKDTHYYLKEWVPA 128


>gi|269941513|emb|CBI49911.1| ribonucleoside-diphosphate reductase subunit [Staphylococcus aureus
           subsp. aureus TW20]
          Length = 340

 Score = 53.3 bits (127), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 44/116 (37%), Gaps = 9/116 (7%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV-ANNI 100
           A   +       W   E     DL++WK+   L+ DE+    + L      ++      +
Sbjct: 19  ALTYWKQNVKQMWTEEEFKPSKDLSVWKT---LSADEQETYVKALSGLTGLDTTQGTEGM 75

Query: 101 VLAIYRHLSNPEC--RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPS 154
            L  + +   PE   R      +  E +H  ++ +I TSL   +   + +   VP+
Sbjct: 76  PLLAFHY---PEEIWRGVFAFMSMMENIHHKSYSHIFTSLLERKDTHYYLKEWVPA 128


>gi|308233466|ref|ZP_07664203.1| ribonucleotide-diphosphate reductase subunit beta [Atopobium
           vaginae DSM 15829]
 gi|328943412|ref|ZP_08240877.1| ribonucleotide-diphosphate reductase subunit beta [Atopobium
           vaginae DSM 15829]
 gi|327491381|gb|EGF23155.1| ribonucleotide-diphosphate reductase subunit beta [Atopobium
           vaginae DSM 15829]
          Length = 339

 Score = 52.9 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 52/144 (36%), Gaps = 7/144 (4%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
                      ++     E +     N W+P  +P+ +DL  W   N L    + +I R 
Sbjct: 23  GCNMRAVNWNRIQDEKDLEVWNRVTQNFWLPENIPVSNDLPSW---NELDSSWQQLIIRT 79

Query: 86  LGFFASSESLVAN-NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE-- 142
                  +++ A    V  I   L++ E +      AF  AVH+ ++  + ++L   E  
Sbjct: 80  FTGLTLLDTVQATVGDVAQIRHALTDIE-QANYANFAFMVAVHARSYGTVFSTLCSSEQI 138

Query: 143 GELFNMYREVPSITAKANWALQYT 166
            E         ++  +A   + Y 
Sbjct: 139 DEAQAWVVNNDALQKRAKALIPYY 162


>gi|301750612|gb|ADK88940.1| ribonucleotide reductase subunit 2 [Leporid herpesvirus 4]
          Length = 316

 Score = 52.9 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 43/126 (34%), Gaps = 8/126 (6%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                    +  N W+ +E+    D       + L+ +E    +    F ++++ LV   
Sbjct: 20  PDINRLRSLSILNRWLESELVFSGDERD---VDKLSPEELDFYRFLFTFLSAADDLVTEE 76

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL-DEGELFNMYRE---VPSI 155
           +   +    S  +   Y + Q   E VHS  +  I   L   DE    N         +I
Sbjct: 77  LG-RLSSLFSQKDILHYYVEQECIEVVHSRVYSIIQMVLFKSDETARRNYVANTVHNSAI 135

Query: 156 TAKANW 161
            AK  W
Sbjct: 136 QAKVRW 141


>gi|251781888|ref|YP_002996190.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
 gi|242390517|dbj|BAH80976.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus
           dysgalactiae subsp. equisimilis GGS_124]
 gi|323126699|gb|ADX23996.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           dysgalactiae subsp. equisimilis ATCC 12394]
          Length = 337

 Score = 52.9 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 52/125 (41%), Gaps = 5/125 (4%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +DL  W+S   L +D + +I R        +++ A    +A
Sbjct: 39  EVWNRVTQNFWLPEKVPVSNDLTSWRS---LGEDWQQLITRTYTGLTLLDTVQATVGDVA 95

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
             +H      +      AF  A+H+ ++  I ++L   E   E         S+  +A  
Sbjct: 96  QIQHSQTDHEQVIYTNFAFMVAIHARSYGTIFSTLCSSEQIEEAHEWVVSTQSLQERARV 155

Query: 162 ALQYT 166
            + Y 
Sbjct: 156 LIPYY 160


>gi|149277655|ref|ZP_01883795.1| ribonucleotide-diphosphate [Pedobacter sp. BAL39]
 gi|149231343|gb|EDM36722.1| ribonucleotide-diphosphate [Pedobacter sp. BAL39]
          Length = 327

 Score = 52.9 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 55/130 (42%), Gaps = 5/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W+ TE     D+  WKS   L+ + + + KR LG     ++L ++  +  +
Sbjct: 20  FWEQNLRQFWVDTEYIPSKDIDSWKS---LSPEIQQVYKRALGGLTLLDTLQSHTGMPKL 76

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             H+   + +  L      EA+H+ ++  I T++       ELF+       +  KA+  
Sbjct: 77  LDHIDGLQNKAVLSFMCMMEAIHAKSYSTIFTTVNSTPEINELFDWVENNKLLQFKASTI 136

Query: 163 LQYTQTLSSP 172
            +Y + L  P
Sbjct: 137 DKYYRALDVP 146


>gi|156743708|ref|YP_001433837.1| ribonucleotide-diphosphate reductase subunit beta [Roseiflexus
           castenholzii DSM 13941]
 gi|156235036|gb|ABU59819.1| ribonucleotide reductase [Roseiflexus castenholzii DSM 13941]
          Length = 295

 Score = 52.9 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 7/81 (8%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN---IVLAIYRHLSN 110
           W P+++    D+  W++   LTDDER ++ R    F + E  V  +   +V  I      
Sbjct: 33  WNPSDIDFSQDMRDWQT---LTDDERDLVLRLTSLFQAGEEAVTLDLLPLVATIAAEGRI 89

Query: 111 PECRQYLLRQAFEEAVHSHTF 131
            E   +L    +EEA H+  F
Sbjct: 90  -EEELFLTSFLWEEAKHTDFF 109


>gi|195977665|ref|YP_002122909.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           equi subsp. zooepidemicus MGCS10565]
 gi|195974370|gb|ACG61896.1| ribonucleotide reductase of class Ib (aerobic) beta subunit NrdF
           [Streptococcus equi subsp. zooepidemicus MGCS10565]
          Length = 337

 Score = 52.9 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 7/126 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN-NIVL 102
           E +     N W+P +VP+ +DL  W+S   L +D + +I R        +++ A    V 
Sbjct: 39  EVWNRVTQNFWLPEKVPVSNDLNSWRS---LGEDWQRLITRTYTGLTLLDTVQATVGDVA 95

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
            I   L++ E +      AF  A+H+ ++  I ++L   +   E  +      S+  +A 
Sbjct: 96  QIQHSLTDHE-QVIYTNFAFMVAIHARSYGTIFSTLCSSQQIEEAHDWVVSTESLQERAR 154

Query: 161 WALQYT 166
             + Y 
Sbjct: 155 VLIPYY 160


>gi|225869037|ref|YP_002744985.1| ribonucleoside-diphosphate reductase beta subunit [Streptococcus
           equi subsp. zooepidemicus]
 gi|225702313|emb|CAX00111.1| ribonucleoside-diphosphate reductase beta subunit [Streptococcus
           equi subsp. zooepidemicus]
          Length = 337

 Score = 52.9 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 7/126 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN-NIVL 102
           E +     N W+P +VP+ +DL  W+S   L +D + +I R        +++ A    V 
Sbjct: 39  EVWNRVTQNFWLPEKVPVSNDLNSWRS---LGEDWQRLITRTYTGLTLLDTVQATVGDVA 95

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
            I   L++ E +      AF  A+H+ ++  I ++L   +   E  +      S+  +A 
Sbjct: 96  QIQHSLTDHE-QVIYTNFAFMVAIHARSYGTIFSTLCSSQQIEEAHDWVVSTESLQERAR 154

Query: 161 WALQYT 166
             + Y 
Sbjct: 155 VLIPYY 160


>gi|225869986|ref|YP_002745933.1| ribonucleoside-diphosphate reductase beta subunit [Streptococcus
           equi subsp. equi 4047]
 gi|225699390|emb|CAW92836.1| ribonucleoside-diphosphate reductase beta subunit [Streptococcus
           equi subsp. equi 4047]
          Length = 337

 Score = 52.9 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 7/126 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN-NIVL 102
           E +     N W+P +VP+ +DL  W+S   L +D + +I R        +++ A    V 
Sbjct: 39  EVWNRVTQNFWLPEKVPVSNDLNSWRS---LGEDWQRLITRTYTGLTLLDTVQATVGDVA 95

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKAN 160
            I   L++ E +      AF  A+H+ ++  I ++L   +   E  +      S+  +A 
Sbjct: 96  QIQHSLTDHE-QVIYTNFAFMVAIHARSYGTIFSTLCSSQQIEEAHDWVVSTESLQERAR 154

Query: 161 WALQYT 166
             + Y 
Sbjct: 155 VLIPYY 160


>gi|51518029|ref|YP_067954.1| BaRF1 [Macacine herpesvirus 4]
 gi|18025480|gb|AAK95424.1| BaRF1 [Macacine herpesvirus 4]
          Length = 302

 Score = 52.9 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 42/118 (35%), Gaps = 14/118 (11%)

Query: 51  NNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSN 110
            N W    + +  D    K    L + +    K    F A +E LV  NI       +++
Sbjct: 22  RNRWFAAHIVLTKDCGCLK---LLNERDLEFYKFLFTFLAMAEKLVNFNIDE----LVTS 74

Query: 111 PE---CRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYRE----VPSITAKANW 161
            E      Y   Q   E VH  T+  I+  L   +    N Y E      ++ AK +W
Sbjct: 75  FESHDIDHYYTEQKAMENVHGETYANILNMLFDGDRAAMNAYAEAIMADGALQAKISW 132


>gi|148656105|ref|YP_001276310.1| ribonucleotide-diphosphate reductase subunit beta [Roseiflexus sp.
           RS-1]
 gi|148568215|gb|ABQ90360.1| ribonucleotide reductase [Roseiflexus sp. RS-1]
          Length = 297

 Score = 52.5 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 7/81 (8%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN---IVLAIYRHLSN 110
           W P+++    D+  W++   LT DER ++ R    F + E  V  +   +V  I      
Sbjct: 32  WNPSDIDFSQDVRDWQT---LTADERDLVLRLTSLFQAGEEAVTLDLLPLVATIAAEGRI 88

Query: 111 PECRQYLLRQAFEEAVHSHTF 131
            E   +L    +EEA H+  F
Sbjct: 89  -EEELFLTSFLWEEAKHTDFF 108


>gi|159146681|gb|ABW90785.1| ribonucleotide reductase subunit 2 [Leporid herpesvirus 4]
          Length = 316

 Score = 52.5 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 34/95 (35%), Gaps = 4/95 (4%)

Query: 40  GWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANN 99
                    +  N W+ +E+    D       + L+ +E    +    F ++++ LV   
Sbjct: 20  PDINRLRSLSILNRWLESELVFSGDERD---VDKLSPEELDFYRFLFTFLSAADDLVTEE 76

Query: 100 IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYI 134
           +   +    S  +   Y + Q   E VHS  +  I
Sbjct: 77  LG-RLSSLFSQKDILHYYVEQECIEVVHSRVYSII 110


>gi|303232548|ref|ZP_07319234.1| ribonucleoside-diphosphate reductase, beta subunit [Atopobium
           vaginae PB189-T1-4]
 gi|302481335|gb|EFL44409.1| ribonucleoside-diphosphate reductase, beta subunit [Atopobium
           vaginae PB189-T1-4]
          Length = 351

 Score = 52.5 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 11/128 (8%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERL--MIKRNLGFFASSESLVAN-NI 100
           E +     N W+P  +P+ +DL  W      T DER   +I R        +++ A+   
Sbjct: 53  EVWNRVTQNFWLPENIPVSNDLPSWN-----TLDERWQQLIIRTFTGLTLLDTVQASVGD 107

Query: 101 VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAK 158
           V  I   +++ E +      AF  AVH+ ++  I ++L   E   E         ++ A+
Sbjct: 108 VAQIRHAITDIE-QANYANFAFMVAVHARSYGTIFSTLCSSEQIDEAQAWVVHNDALQAR 166

Query: 159 ANWALQYT 166
           A   + Y 
Sbjct: 167 AQALIPYY 174


>gi|331699199|ref|YP_004335438.1| ribonucleotide-diphosphate reductase subunit beta [Pseudonocardia
           dioxanivorans CB1190]
 gi|326953888|gb|AEA27585.1| ribonucleotide-diphosphate reductase subunit beta [Pseudonocardia
           dioxanivorans CB1190]
          Length = 324

 Score = 52.5 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 41/113 (36%), Gaps = 15/113 (13%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
            P++       +      HW P ++    D         +TDDER         F + E 
Sbjct: 26  FPMR------LFAKGNARHWNPADIDFSQDARD---IAAMTDDERWWTFALAAQFMAGEE 76

Query: 95  LVANNIVLAIYRHLSNPECR----QYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
            V  ++   +       E R     YL +  FEEA H+  F+    ++G+ E 
Sbjct: 77  SVTQDLQPFVAAM--AAEGRLADEMYLTQFVFEEAKHTDAFRRWFDAVGMTED 127


>gi|229489433|ref|ZP_04383296.1| ribonucleoside-diphosphate reductase, beta subunit [Rhodococcus
           erythropolis SK121]
 gi|229323530|gb|EEN89288.1| ribonucleoside-diphosphate reductase, beta subunit [Rhodococcus
           erythropolis SK121]
          Length = 318

 Score = 52.5 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 40/103 (38%), Gaps = 9/103 (8%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W PT++    D   W+    LT +++         F + E  V  +I    
Sbjct: 28  LFTKGNAKFWNPTDLDFSQDARDWQE---LTSEQQRSATFLCAQFIAGEEAVTEDI-QPF 83

Query: 105 YRHLSNPECR----QYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
            + +S  E R     YL +  FEEA H+  F+  +  +GL   
Sbjct: 84  MKAMS-TEGRFGDEMYLTQFCFEEAKHTQVFRLWMDEVGLTSD 125


>gi|226305446|ref|YP_002765406.1| hypothetical protein RER_19590 [Rhodococcus erythropolis PR4]
 gi|226184563|dbj|BAH32667.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
          Length = 318

 Score = 52.5 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 40/103 (38%), Gaps = 9/103 (8%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W PT++    D   W+    LT +++         F + E  V  +I    
Sbjct: 28  LFTKGNAKFWNPTDLDFSQDARDWQE---LTSEQQRSATFLCAQFIAGEEAVTEDI-QPF 83

Query: 105 YRHLSNPECR----QYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
            + +S  E R     YL +  FEEA H+  F+  +  +GL   
Sbjct: 84  MKAMS-TEGRFGDEMYLTQFCFEEAKHTQVFRLWMDEVGLTSD 125


>gi|257057366|ref|YP_003135198.1| ribonucleotide-diphosphate reductase subunit beta
           [Saccharomonospora viridis DSM 43017]
 gi|256587238|gb|ACU98371.1| ribonucleotide reductase, beta subunit [Saccharomonospora viridis
           DSM 43017]
          Length = 328

 Score = 52.5 bits (125), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 9/103 (8%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W P ++    D   W+    LTD +RL        FA+ E  V  +I    
Sbjct: 31  LFAKGNRKFWDPADIDFSVDARDWEK---LTDRQRLSATYLCAQFAAGEEAVTEDI-QPF 86

Query: 105 YRHLSNPECR----QYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
            R +   E R     YL +  FEEA H+  F+  + ++GL + 
Sbjct: 87  LRAM-AAEGRLGDEMYLAQFCFEEAKHTEAFRRWMDAVGLTDD 128


>gi|326803224|ref|YP_004321042.1| ribonucleoside-diphosphate reductase, beta subunit [Aerococcus
           urinae ACS-120-V-Col10a]
 gi|326650868|gb|AEA01051.1| ribonucleoside-diphosphate reductase, beta subunit [Aerococcus
           urinae ACS-120-V-Col10a]
          Length = 337

 Score = 52.2 bits (124), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 45/117 (38%), Gaps = 5/117 (4%)

Query: 28  RSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLG 87
                    +      E +     N W+P  +P+ +DL  W   N L DD + +I R   
Sbjct: 23  NMRAINWNKIVDEKDLEVWNRVTQNFWLPENIPVSNDLPSW---NELDDDWQQLITRTFT 79

Query: 88  FFASSESLVAN-NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
                +++ ++   V  I   L+  E +      AF   VH+ ++  I ++L   E 
Sbjct: 80  GLTLLDTVQSSIGDVAQIKNSLTEQE-QVIYANFAFMVGVHARSYGTIFSTLCTSEQ 135


>gi|313665031|ref|YP_004046902.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma
           leachii PG50]
 gi|312949985|gb|ADR24581.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma
           leachii PG50]
          Length = 339

 Score = 51.8 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 56/148 (37%), Gaps = 7/148 (4%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           K              +      E +     N W+P ++P+ +DL  W+S   L+ + + +
Sbjct: 19  KNNFKGNLRSVNWNVINDEKDLEVWNRITQNFWLPEKIPVSNDLPSWRS---LSAEWQQL 75

Query: 82  IKRNLGFFASSESLVAN-NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
           + R        +++ A    V  I   L++ E +      AF   VH+ ++  I ++L  
Sbjct: 76  VTRTFTGLTLLDTVQATVGDVAQIEHSLTDHE-QVIYSNFAFMVGVHARSYGTIFSTLCS 134

Query: 141 DE--GELFNMYREVPSITAKANWALQYT 166
            E   E      +  S+  +A   + Y 
Sbjct: 135 SEQIEEAHEWVVKTESLQKRAKALIPYY 162


>gi|83319806|ref|YP_424093.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma
           capricolum subsp. capricolum ATCC 27343]
 gi|83283692|gb|ABC01624.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma
           capricolum subsp. capricolum ATCC 27343]
          Length = 339

 Score = 51.8 bits (123), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 56/148 (37%), Gaps = 7/148 (4%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           K              +      E +     N W+P ++P+ +DL  W+S   L+ + + +
Sbjct: 19  KNDFKGNLRSVNWNVINDEKDLEVWNRITQNFWLPEKIPVSNDLPSWRS---LSAEWQQL 75

Query: 82  IKRNLGFFASSESLVAN-NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
           + R        +++ A    V  I   L++ E +      AF   VH+ ++  I ++L  
Sbjct: 76  VTRTFTGLTLLDTVQATVGDVAQIEHSLTDHE-QVIYSNFAFMVGVHARSYGTIFSTLCS 134

Query: 141 DE--GELFNMYREVPSITAKANWALQYT 166
            E   E      +  S+  +A   + Y 
Sbjct: 135 SEQIEEAHEWVVKTESLQKRAKALIPYY 162


>gi|298247783|ref|ZP_06971588.1| ribonucleotide reductase [Ktedonobacter racemifer DSM 44963]
 gi|297550442|gb|EFH84308.1| ribonucleotide reductase [Ktedonobacter racemifer DSM 44963]
          Length = 293

 Score = 51.8 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 48/118 (40%), Gaps = 12/118 (10%)

Query: 31  VNQLLPLKYGWAWEKYLSACN-NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
            + +LP++       Y  A     W P ++ +  D   W+    L +D R  ++  +  F
Sbjct: 18  RHDILPMR------LYHKAKKLGTWDPRDIDLSQDCQDWQQ---LAEDPRTRLRNLILSF 68

Query: 90  ASSESLVANNIVLAIYRHLSN--PECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL 145
            + E  V  +++  I         E   +L    +EE  H+  F+ I+  +   EG+L
Sbjct: 69  QAGEEAVTLDLLPLIMTVAREGRLEEELFLTTFLWEEGKHTEFFRRILDEVMQAEGDL 126


>gi|226311199|ref|YP_002771093.1| hypothetical protein BBR47_16120 [Brevibacillus brevis NBRC 100599]
 gi|226094147|dbj|BAH42589.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 297

 Score = 51.8 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 41/99 (41%), Gaps = 4/99 (4%)

Query: 43  WEKYLSACN-NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
           ++ Y  A     W P ++    D   + + N    +E   + R  GF    E++  + + 
Sbjct: 22  YQLYQKAKRYGIWNPQDIDFTQDREDYANMNPEQKEE--TLGRIAGFLGGEEAVTLDLLP 79

Query: 102 L-AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLG 139
           L  +       E   +L    FEEA H+  F+ ++ ++G
Sbjct: 80  LIMVIAEEGRLEEEMFLTTFLFEEAKHTEFFRLVLDNIG 118


>gi|56410463|ref|YP_145837.1| ribonucleotide-diphosphate reductase subunit beta [Geobacillus
           kaustophilus HTA426]
 gi|56378360|dbj|BAD74269.1| ribonuleotide reductase small subunit [Geobacillus kaustophilus
           HTA426]
          Length = 292

 Score = 51.8 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 36/94 (38%), Gaps = 11/94 (11%)

Query: 42  AWEKYLSACN-NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNI 100
           AW+ Y  A     W P E+ + +D   +K    L +  R  +      F ++E     N+
Sbjct: 32  AWKLYQMAIRFGTWNPQEIDLSEDKKHFKQ---LDEQRRAYLIHFCTGFWNAE----ENV 84

Query: 101 VLAIYRHLSNP---ECRQYLLRQAFEEAVHSHTF 131
            L     +      E + +L  Q  +E  H+  F
Sbjct: 85  ALKFCPWIMIAPSIEQQAFLSTQLVDEFKHTEFF 118


>gi|306827912|ref|ZP_07461179.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes ATCC 10782]
 gi|304429831|gb|EFM32873.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes ATCC 10782]
          Length = 337

 Score = 51.8 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 51/125 (40%), Gaps = 5/125 (4%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +DL  W+S   L +D + +I R        +++ A    +A
Sbjct: 39  EVWNRVTQNFWLPEKVPVSNDLNSWRS---LGEDWQQLITRTYTGLTLLDTVQATVGDVA 95

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
             +H      +      AF   +H+ ++  I ++L   E   E         S+  +A  
Sbjct: 96  QIQHSQTDHEQVIYTNFAFMVGIHARSYGTIFSTLCSSEQIEEAHEWVVSTQSLQDRARV 155

Query: 162 ALQYT 166
            + Y 
Sbjct: 156 LIPYY 160


>gi|56807592|ref|ZP_00365501.1| COG0208: Ribonucleotide reductase, beta subunit [Streptococcus
           pyogenes M49 591]
          Length = 311

 Score = 51.8 bits (123), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 51/125 (40%), Gaps = 5/125 (4%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +DL  W+S   L +D + +I R        +++ A    +A
Sbjct: 13  EVWNRVTQNFWLPEKVPVSNDLNSWRS---LGEDWQQLITRTYTGLTLLDTVQATVGDVA 69

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
             +H      +      AF   +H+ ++  I ++L   E   E         S+  +A  
Sbjct: 70  QIQHSQTDHEQVIYTNFAFMVGIHARSYGTIFSTLCSSEQIEEAHEWVVSTQSLQDRARV 129

Query: 162 ALQYT 166
            + Y 
Sbjct: 130 LIPYY 134


>gi|209558898|ref|YP_002285370.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes NZ131]
 gi|209540099|gb|ACI60675.1| Ribonucleotide reductase of class Ib (aerobic), beta subunit
           [Streptococcus pyogenes NZ131]
          Length = 337

 Score = 51.8 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 51/125 (40%), Gaps = 5/125 (4%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +DL  W+S   L +D + +I R        +++ A    +A
Sbjct: 39  EVWNRVTQNFWLPEKVPVSNDLNSWRS---LGEDWQQLITRTYTGLTLLDTVQATVGDVA 95

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
             +H      +      AF   +H+ ++  I ++L   E   E         S+  +A  
Sbjct: 96  QIQHSQTDHEQVIYTNFAFMVGIHARSYGTIFSTLCSSEQIEEAHEWVVSTQSLQDRARV 155

Query: 162 ALQYT 166
            + Y 
Sbjct: 156 LIPYY 160


>gi|21909837|ref|NP_664105.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS315]
 gi|28896468|ref|NP_802818.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes SSI-1]
 gi|50913718|ref|YP_059690.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS10394]
 gi|21904023|gb|AAM78908.1| putative ribonucleotide reductase 2 [Streptococcus pyogenes
           MGAS315]
 gi|28811719|dbj|BAC64651.1| putative ribonucleotide reductase 2 [Streptococcus pyogenes SSI-1]
 gi|50902792|gb|AAT86507.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS10394]
          Length = 337

 Score = 51.8 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 51/125 (40%), Gaps = 5/125 (4%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +DL  W+S   L +D + +I R        +++ A    +A
Sbjct: 39  EVWNRVTQNFWLPEKVPVSNDLNSWRS---LGEDWQQLITRTYTGLTLLDTVQATVGDVA 95

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
             +H      +      AF   +H+ ++  I ++L   E   E         S+  +A  
Sbjct: 96  QIQHSQTDHEQVIYTNFAFMVGIHARSYGTIFSTLCSSEQIEEAHEWVVSTQSLQDRARV 155

Query: 162 ALQYT 166
            + Y 
Sbjct: 156 LIPYY 160


>gi|15674552|ref|NP_268726.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes M1 GAS]
 gi|71910160|ref|YP_281710.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS5005]
 gi|94987981|ref|YP_596082.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS9429]
 gi|94989855|ref|YP_597955.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS10270]
 gi|94991863|ref|YP_599962.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS2096]
 gi|13621658|gb|AAK33447.1| putative ribonucleotide reductase 2 [Streptococcus pyogenes M1 GAS]
 gi|71852942|gb|AAZ50965.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS5005]
 gi|94541489|gb|ABF31538.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS9429]
 gi|94543363|gb|ABF33411.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS10270]
 gi|94545371|gb|ABF35418.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS2096]
          Length = 337

 Score = 51.8 bits (123), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 51/125 (40%), Gaps = 5/125 (4%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +DL  W+S   L +D + +I R        +++ A    +A
Sbjct: 39  EVWNRVTQNFWLPEKVPVSNDLNSWRS---LGEDWQQLITRTYTGLTLLDTVQATVGDVA 95

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
             +H      +      AF   +H+ ++  I ++L   E   E         S+  +A  
Sbjct: 96  QIQHSQTDHEQVIYTNFAFMVGIHARSYGTIFSTLCSSEQIEEAHEWVVSTQSLQDRARV 155

Query: 162 ALQYT 166
            + Y 
Sbjct: 156 LIPYY 160


>gi|139474322|ref|YP_001129038.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes str. Manfredo]
 gi|134272569|emb|CAM30835.1| ribonucleoside-diphosphate reductase beta subunit [Streptococcus
           pyogenes str. Manfredo]
          Length = 337

 Score = 51.4 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 51/125 (40%), Gaps = 5/125 (4%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +DL  W+S   L +D + +I R        +++ A    +A
Sbjct: 39  EVWNRVTQNFWLPEKVPVSNDLNSWRS---LGEDWQQLITRTYTGLTLLDTVQATVGDVA 95

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
             +H      +      AF   +H+ ++  I ++L   E   E         S+  +A  
Sbjct: 96  QIQHSQTDHEQVIYTNFAFMVGIHARSYGTIFSTLCSSEQIEEAHEWVVSTQSLQDRARV 155

Query: 162 ALQYT 166
            + Y 
Sbjct: 156 LIPYY 160


>gi|262038309|ref|ZP_06011695.1| ribonucleoside-diphosphate reductase, beta subunit [Leptotrichia
           goodfellowii F0264]
 gi|261747660|gb|EEY35113.1| ribonucleoside-diphosphate reductase, beta subunit [Leptotrichia
           goodfellowii F0264]
          Length = 334

 Score = 51.4 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 55/130 (42%), Gaps = 5/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W+ TE     D+  W S   L  + +L   + LG     ++L ++  +  I
Sbjct: 22  FWEQNLKQFWIDTEYIPSKDIDSWHS---LEPEMKLAYLQVLGGLTLLDTLQSHTGMPKI 78

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             H+ + +CR  L      E +H+ ++  I T++       E FN  +E   +  KAN  
Sbjct: 79  IDHIESLQCRSVLSYMCMMETIHAKSYSTIFTTVASTREINETFNWVQENEHLQYKANKI 138

Query: 163 LQYTQTLSSP 172
             Y Q +++P
Sbjct: 139 DYYYQKMNNP 148


>gi|94993745|ref|YP_601843.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS10750]
 gi|94547253|gb|ABF37299.1| Ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS10750]
          Length = 337

 Score = 51.4 bits (122), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 51/125 (40%), Gaps = 5/125 (4%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +DL  W+S   L +D + +I R        +++ A    +A
Sbjct: 39  EVWNRVTQNFWLPEKVPVSNDLNSWRS---LGEDWQQLITRTYTGLTLLDTVQATVGDVA 95

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANW 161
             +H      +      AF   +H+ ++  I ++L   E   E         S+  +A  
Sbjct: 96  QIQHSQTDHEQVIYTNFAFMVGIHARSYGTIFSTLCSSEQIEEAHEWVVSTQSLQDRARV 155

Query: 162 ALQYT 166
            + Y 
Sbjct: 156 LIPYY 160


>gi|330861132|emb|CBX71395.1| hypothetical protein YEW_EY21270 [Yersinia enterocolitica W22703]
          Length = 90

 Score = 51.4 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 3/65 (4%)

Query: 33 QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
              ++     E +     N W+P +VP+ +D+  W     LT DE+ +  R        
Sbjct: 14 NWNKIEDDKDLEVWNRLTANFWLPEKVPLSNDIPSWAK---LTADEQQLTIRVFTGLTLL 70

Query: 93 ESLVA 97
          +++  
Sbjct: 71 DTIQN 75


>gi|203288309|ref|YP_002223359.1| ribonucleoside-diphosphate reductase, beta subunit [Borrelia
           recurrentis A1]
 gi|203288575|ref|YP_002223482.1| ribonucleoside-diphosphate reductase beta subunit [Borrelia
           duttonii Ly]
 gi|201084282|gb|ACH93870.1| ribonucleoside-diphosphate reductase beta subunit [Borrelia
           duttonii Ly]
 gi|201085529|gb|ACH95102.1| ribonucleoside-diphosphate reductase, beta subunit [Borrelia
           recurrentis A1]
          Length = 321

 Score = 51.4 bits (122), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 36/84 (42%), Gaps = 3/84 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W+  E+P+ DD  +W   N L+ DER + ++ LG     ++   +  +  I
Sbjct: 21  FWDQNIRQFWVDEEIPISDDKLVW---NTLSVDERDVYEKVLGGLTLLDTEQGSVGMPRI 77

Query: 105 YRHLSNPECRQYLLRQAFEEAVHS 128
              + N + +  L      E +H+
Sbjct: 78  ALAIDNLDYKPILGFMGAMEHMHA 101


>gi|294998842|gb|ADF58156.1| ribonucleoside-diphosphate reductase beta subunit [Pseudomonas
           phage JG004]
          Length = 348

 Score = 51.0 bits (121), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 46/127 (36%), Gaps = 5/127 (3%)

Query: 38  KYGWAWEKYLSA-CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           KY    E          W  +E  M+ +L     K  L   +   +K  L  F   E +V
Sbjct: 30  KYPVIVELANQQLEEKLWFSSE--MKVELDKLNLKFKLEPHQLHAVKTVLQLFLKYELIV 87

Query: 97  ANN-IVLAIYRHLSNPECRQYLLRQAFEE-AVHSHTFQYIITSLGLDEGELFNMYREVPS 154
                +  + R    PE +         E AVH+  +  I   LG+D    +  Y++ P 
Sbjct: 88  GEEFWMGKVVRTFPRPEVKLAASILCMMELAVHAEFYNQINVVLGMDTDADYVAYKDDPE 147

Query: 155 ITAKANW 161
           +  + +W
Sbjct: 148 LMGRMDW 154


>gi|6581175|gb|AAF04633.2|AF099142_1 small subunit of ribonucleotide reductase [shrimp white spot
          syndrome virus]
          Length = 100

 Score = 51.0 bits (121), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 15/48 (31%)

Query: 17 VNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDD 64
          V+     +     +     P+ +   WE Y       W   E+  + D
Sbjct: 52 VDTFKHLLTRENPNRFVSRPIVHEDLWEMYKKEVACFWTLEEIDFERD 99


>gi|331703804|ref|YP_004400491.1| ribonucleoside diphosphate reductase 2 betachain [Mycoplasma
           mycoides subsp. capri LC str. 95010]
 gi|256383837|gb|ACU78407.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma
           mycoides subsp. capri str. GM12]
 gi|256384668|gb|ACU79237.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma
           mycoides subsp. capri str. GM12]
 gi|296455270|gb|ADH21505.1| ribonucleoside-diphosphate reductase, beta subunit [synthetic
           Mycoplasma mycoides JCVI-syn1.0]
 gi|328802359|emb|CBW54513.1| Ribonucleoside diphosphate reductase 2 betachain [Mycoplasma
           mycoides subsp. capri LC str. 95010]
          Length = 339

 Score = 51.0 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 57/148 (38%), Gaps = 7/148 (4%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           K              +      E +     N W+P ++P+ +DL+ W+S   L+ + + +
Sbjct: 19  KNNFKGNLRSVNWNVINDEKDLEVWNRITQNFWLPEKIPVSNDLSSWRS---LSSEWQQL 75

Query: 82  IKRNLGFFASSESLVAN-NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
           + R        +++ A    V  I   L++ E +      AF   VH+ ++  I ++L  
Sbjct: 76  VTRTFTGLTLLDTVQATVGDVAQIEHSLTDHE-QVIYSNFAFMVGVHARSYGTIFSTLCS 134

Query: 141 DE--GELFNMYREVPSITAKANWALQYT 166
            E   E      +  ++  +A   + Y 
Sbjct: 135 SEQIEEAHEWVVKTETLQKRAKALIPYY 162


>gi|42561374|ref|NP_975825.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma
           mycoides subsp. mycoides SC str. PG1]
 gi|42492872|emb|CAE77467.1| ribonucleoside-diphosphate reductase 2 beta chain [Mycoplasma
           mycoides subsp. mycoides SC str. PG1]
 gi|301321363|gb|ADK70006.1| ribonucleoside-diphosphate reductase, beta subunit [Mycoplasma
           mycoides subsp. mycoides SC str. Gladysdale]
          Length = 339

 Score = 51.0 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 57/148 (38%), Gaps = 7/148 (4%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           K              +      E +     N W+P ++P+ +DL+ W+S   L+ + + +
Sbjct: 19  KNNFKGNLRSVNWNVINDEKDLEVWNRITQNFWLPEKIPVSNDLSSWRS---LSSEWQQL 75

Query: 82  IKRNLGFFASSESLVAN-NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
           + R        +++ A    V  I   L++ E +      AF   VH+ ++  I ++L  
Sbjct: 76  VTRTFTGLTLLDTVQATVGDVAQIEHSLTDHE-QVIYSNFAFMVGVHARSYGTIFSTLCS 134

Query: 141 DE--GELFNMYREVPSITAKANWALQYT 166
            E   E      +  ++  +A   + Y 
Sbjct: 135 SEQIEEAHEWVVKTETLQKRAKALIPYY 162


>gi|257125877|ref|YP_003163991.1| ribonucleoside-diphosphate reductase [Leptotrichia buccalis
           C-1013-b]
 gi|257049816|gb|ACV39000.1| Ribonucleoside-diphosphate reductase [Leptotrichia buccalis
           C-1013-b]
          Length = 335

 Score = 51.0 bits (121), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 5/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W+ TE     D+  W   N L    +L     LG     ++L ++  +  I
Sbjct: 22  FWEQNLKQFWIDTEYIPSKDIDSW---NSLEPAMKLAYLHVLGGLTLLDTLQSHTGMPKI 78

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             H+ + + R  L      E +H+ ++  I T++       E F   +E P +  KAN  
Sbjct: 79  IDHIESLQNRSVLSYMCMMETIHAKSYSTIFTTVASTREINETFRWVQENPHLQYKANKI 138

Query: 163 LQYTQTLSSP 172
             Y Q +++P
Sbjct: 139 DTYYQKMNNP 148


>gi|71903000|ref|YP_279803.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS6180]
 gi|71802095|gb|AAX71448.1| ribonucleoside-diphosphate reductase beta chain [Streptococcus
           pyogenes MGAS6180]
          Length = 337

 Score = 50.6 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 3/95 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +DL  W+S   L +D + +I R        +++ A    +A
Sbjct: 39  EVWNRVTQNFWLPEKVPVSNDLNSWRS---LGEDWQQLITRTYTGLTLLDTVQATVGDVA 95

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
             +H      +      AF   +H+ ++  I ++L
Sbjct: 96  QIQHSQTDHEQVIYTNFAFMVGIHARSYGTIFSTL 130


>gi|320450740|ref|YP_004202836.1| ribonucleoside-diphosphate reductase subunit beta [Thermus
           scotoductus SA-01]
 gi|320150909|gb|ADW22287.1| ribonucleoside-diphosphate reductase, subunit beta [Thermus
           scotoductus SA-01]
          Length = 299

 Score = 50.6 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 13/104 (12%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
            PLK       Y  A    W P  + +++D    K+   L+ +++         F + E 
Sbjct: 17  FPLK------LYHKAKRYFWDPQTIDLEEDQ---KTFQKLSPEQKEASLHLASLFVAGEE 67

Query: 95  LVANN---IVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
            V  +   +V  I R     E   +L     +EA H   F  ++
Sbjct: 68  AVTLDLLPLVQVIARE-GRLEEEMFLTTFLVDEAKHVEFFSLLL 110


>gi|19745563|ref|NP_606699.1| ribonucleotide-diphosphate reductase subunit beta [Streptococcus
           pyogenes MGAS8232]
 gi|19747686|gb|AAL97198.1| putative ribonucleotide reductase 2 [Streptococcus pyogenes
           MGAS8232]
          Length = 337

 Score = 50.6 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 3/95 (3%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
           E +     N W+P +VP+ +DL  W+S   L +D + +I R        +++ A    +A
Sbjct: 39  EVWNRVTQNFWLPEKVPVSNDLNSWRS---LGEDWQQLITRTYTGLTLLDTVQATVGDVA 95

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL 138
             +H      +      AF   +H+ ++  I ++L
Sbjct: 96  QIQHSQTDHEQVIYTNFAFMVGIHARSYGTIFSTL 130


>gi|260889741|ref|ZP_05901004.1| ribonucleoside-diphosphate reductase, beta subunit [Leptotrichia
           hofstadii F0254]
 gi|260860347|gb|EEX74847.1| ribonucleoside-diphosphate reductase, beta subunit [Leptotrichia
           hofstadii F0254]
          Length = 335

 Score = 50.6 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 5/130 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W+ TE     D+  W   N L    +L     LG     ++L ++  +  I
Sbjct: 23  FWEQNLKQFWIDTEYIPSKDIDSW---NSLEPAMKLAYLHVLGGLTLLDTLQSHTGMPKI 79

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             H+ + + R  L      E +H+ ++  I T++       E F   +E P +  KAN  
Sbjct: 80  IDHIESLQNRSVLSYMCMMETIHAKSYSTIFTTVASTREINETFRWVQENPHLQYKANKI 139

Query: 163 LQYTQTLSSP 172
             Y Q +++P
Sbjct: 140 DAYYQKMNNP 149


>gi|66957902|gb|AAY59065.1| ribonucleotide reductase small subunit [Tortoise herpesvirus]
          Length = 215

 Score = 50.6 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 49/135 (36%), Gaps = 9/135 (6%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
               A  N W   E    DD+  +   + L  +     +    F ++++  V  N+   +
Sbjct: 16  LRNLAIKNRWAEDEFMYTDDIKDF---SRLDPEALDFYRFIFTFLSAADDKVNINL-DQL 71

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYRE----VPSITAKAN 160
            +     +   Y   Q   E VHS T+  +  +L  ++ +    Y E     P+I  K +
Sbjct: 72  KQLFPQKDVHHYYATQEDIECVHSRTYAGVQLALFNNDDDARRRYIEANVSHPTIETKFD 131

Query: 161 WA-LQYTQTLSSPSF 174
           W   +  +  S P  
Sbjct: 132 WLNTKIMENESVPEK 146


>gi|33340378|gb|AAQ14729.1|AF320576_197 putative ribonucleoside diphosphate reductase beta chain
           [Enterobacteria phage Felix 01]
          Length = 377

 Score = 50.6 bits (120), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 56/163 (34%), Gaps = 3/163 (1%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
            L         L   Y   +E Y       W   E P +     ++S          ++ 
Sbjct: 28  FLGGERKTFDSLNKHYPKIFELYKQQKAQDWSEDEFPFEQSRLDFESVPASMSG---VML 84

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
             L +   +++ VA ++  A    +S+      +++Q+  E +H+ T+  I+     +  
Sbjct: 85  EILKWQWEADTQVAKSLAFAFAPFISDDIYATAIMKQSEIENLHALTYSEIVRQCIKNPE 144

Query: 144 ELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRIL 186
            + +   +  ++  +     +  + L     +Y     R  +L
Sbjct: 145 TILDEINQNVAVQDRLKTVNRVLEELLDEGINYRLSYVRDSLL 187


>gi|326804460|ref|YP_004327264.1| ribonucleotide-diphosphate reductase beta subunit [Pseudomonas
           phage PAK_P1]
 gi|290873873|gb|ADD65076.1| ribonucleotide-diphosphate reductase beta subunit [Pseudomonas
           phage PAK_P1]
          Length = 348

 Score = 50.2 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 45/127 (35%), Gaps = 5/127 (3%)

Query: 38  KYGWAWEKYLSA-CNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           KY    E          W  +E  M+ +L     K  L   +   +K  L  F   E +V
Sbjct: 30  KYPVIVELANQQLEEKLWFSSE--MKVELDKLNLKFKLEPHQLHAVKTVLQLFLKYELIV 87

Query: 97  ANN-IVLAIYRHLSNPECRQYLLRQAFEE-AVHSHTFQYIITSLGLDEGELFNMYREVPS 154
                +  + R    PE +         E AVH+  +  I   LG+D    +  Y++ P 
Sbjct: 88  GEEFWMGKVVRTFPRPEVKLAASILCMMELAVHAEFYNQINVVLGMDTDADYVAYKDDPE 147

Query: 155 ITAKANW 161
           +  +  W
Sbjct: 148 LMGRMEW 154


>gi|38707874|ref|NP_944994.1| Ribonucleoside triphosphate reductase, beta chain [Enterobacteria
           phage Felix 01]
 gi|238801854|ref|YP_002922904.1| ribonucleoside triphosphate reductase, beta chain [Enterobacteria
           phage WV8]
 gi|33340477|gb|AAQ14828.1| putative ribonucleoside diphosphate reductase beta chain
           [Enterobacteria phage Felix 01]
 gi|216263067|gb|ACJ71935.1| ribonucleoside triphosphate reductase, beta chain [Enterobacteria
           phage WV8]
          Length = 357

 Score = 50.2 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 56/163 (34%), Gaps = 3/163 (1%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
            L         L   Y   +E Y       W   E P +     ++S          ++ 
Sbjct: 8   FLGGERKTFDSLNKHYPKIFELYKQQKAQDWSEDEFPFEQSRLDFESVPASMSG---VML 64

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
             L +   +++ VA ++  A    +S+      +++Q+  E +H+ T+  I+     +  
Sbjct: 65  EILKWQWEADTQVAKSLAFAFAPFISDDIYATAIMKQSEIENLHALTYSEIVRQCIKNPE 124

Query: 144 ELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRIL 186
            + +   +  ++  +     +  + L     +Y     R  +L
Sbjct: 125 TILDEINQNVAVQDRLKTVNRVLEELLDEGINYRLSYVRDSLL 167


>gi|326383562|ref|ZP_08205248.1| ribonucleotide-diphosphate reductase subunit beta [Gordonia
           neofelifaecis NRRL B-59395]
 gi|326197646|gb|EGD54834.1| ribonucleotide-diphosphate reductase subunit beta [Gordonia
           neofelifaecis NRRL B-59395]
          Length = 297

 Score = 50.2 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 38/105 (36%), Gaps = 13/105 (12%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W P  +    D   W    GLTDD+R      +  F + E  V  +I    
Sbjct: 10  LFTKGNAKTWDPASIDFSQDALDWA---GLTDDQRRSATYLVSQFVAGEEAVTEDI---- 62

Query: 105 YRHLSNPEC------RQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
              ++            YL +   +EA H+  F+  + ++GL E 
Sbjct: 63  RPFMNAMSAEDRFGDEMYLAQFCLDEAKHAQGFRLWMDAVGLTED 107


>gi|269975299|gb|ACZ55523.1| ribonucleoside diphosphate reductase beta chain [Staphylococcus
           phage SA1]
          Length = 357

 Score = 50.2 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 56/163 (34%), Gaps = 3/163 (1%)

Query: 24  MLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIK 83
            L         L   Y   +E Y       W   E P +     ++S          ++ 
Sbjct: 8   FLGGERKTFDSLNKHYPKIFELYKQQKAQDWSEDEFPFEQSRLDFESVPASMSG---VML 64

Query: 84  RNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
             L +   +++ VA ++  A    +S+      +++Q+  E +H+ T+  I+     +  
Sbjct: 65  EILKWQWEADTQVAKSLAFAFAPFISDDIYATAIMKQSEIENLHALTYSEIVRQCIKNPE 124

Query: 144 ELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRIL 186
            + +   +  ++  +     +  + L     +Y     R  +L
Sbjct: 125 TILDEINQNIAVQDRLKTVNRVLEELLDEGINYRLSYVRDSLL 167


>gi|163848862|ref|YP_001636906.1| ribonucleotide-diphosphate reductase subunit beta [Chloroflexus
           aurantiacus J-10-fl]
 gi|222526817|ref|YP_002571288.1| ribonucleotide-diphosphate reductase subunit beta [Chloroflexus sp.
           Y-400-fl]
 gi|163670151|gb|ABY36517.1| ribonucleotide reductase [Chloroflexus aurantiacus J-10-fl]
 gi|222450696|gb|ACM54962.1| ribonucleotide reductase [Chloroflexus sp. Y-400-fl]
          Length = 297

 Score = 50.2 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 5/84 (5%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSN--P 111
           W P+ + +  D+  W+    L D+ER ++ R    F + E  V  +++  I         
Sbjct: 32  WNPSLIDLSRDIRDWEQ---LRDEERDLLLRLTALFQAGEEAVTLDLLPLIRTIAREGRL 88

Query: 112 ECRQYLLRQAFEEAVHSHTFQYII 135
           E   YL    FEEA H+  F   I
Sbjct: 89  EEELYLTTFLFEEAKHTDFFARFI 112


>gi|213585578|ref|ZP_03367404.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-0664]
          Length = 189

 Score = 50.2 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 26/60 (43%)

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
            PE   ++   AF E +HS ++ +II ++  D   +F+       I  +A     Y   L
Sbjct: 2   IPELETWVETWAFSETIHSRSYTHIIRNIVNDPAVVFDDIVTNEQIQKRAEGISAYYDEL 61


>gi|326800312|ref|YP_004318131.1| ribonucleoside-diphosphate reductase [Sphingobacterium sp. 21]
 gi|326551076|gb|ADZ79461.1| Ribonucleoside-diphosphate reductase [Sphingobacterium sp. 21]
          Length = 327

 Score = 49.5 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 54/128 (42%), Gaps = 5/128 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W+ TE     D+ +WK    LT + +   K+ LG     ++L ++  +  I
Sbjct: 20  FWEQNIRQFWIDTEYIPSKDIDVWKK---LTPEMQETYKKALGGLTLLDTLQSHTGMPKI 76

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             H+   + +  L      EA+H+ ++  I T++       ELF   ++   +  KA   
Sbjct: 77  LDHIDGLQSKAVLSYMCMMEAIHAKSYSTIFTTVASTPEINELFEWVQDNKYLQFKAATI 136

Query: 163 LQYTQTLS 170
            QY ++L 
Sbjct: 137 DQYYRSLD 144


>gi|221783|dbj|BAA00748.1| UL40 [Human herpesvirus 2]
          Length = 262

 Score = 49.5 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 5/85 (5%)

Query: 81  MIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
             +    F ++++ LV  N+   +       +   Y + Q   E VHS  +  I   L  
Sbjct: 4   FYRFLFAFLSAADDLVTENLG-GLSGLFEQKDILHYYVEQECIEVVHSRVYNIIQLVLFH 62

Query: 141 DEGELFNMY--REV--PSITAKANW 161
           +  +    Y  R +  P+I  K +W
Sbjct: 63  NNDQARRAYVARTINHPAIRVKVDW 87


>gi|227537625|ref|ZP_03967674.1| ribonucleoside-diphosphate reductase [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|300771015|ref|ZP_07080892.1| ribonucleotide-diphosphate reductase subunit beta [Sphingobacterium
           spiritivorum ATCC 33861]
 gi|227242511|gb|EEI92526.1| ribonucleoside-diphosphate reductase [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|300762288|gb|EFK59107.1| ribonucleotide-diphosphate reductase subunit beta [Sphingobacterium
           spiritivorum ATCC 33861]
          Length = 328

 Score = 49.5 bits (117), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 63/156 (40%), Gaps = 7/156 (4%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
           A   +       W+ TE     D+  WK   GL+ D +   K+ LG     ++L ++  +
Sbjct: 18  ALMFWEQNIKQFWIDTEYIPSKDIDSWK---GLSWDMKECYKKALGGLTLLDTLQSHTGM 74

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYREVPSITAKA 159
             I  H+ + + +  L      EA+H+ ++  I T++    +  ++F    +   +  KA
Sbjct: 75  PKIIDHIDSLQNKAVLSYMCMMEAIHAKSYSTIFTTVSTTNEINDVFGWVEQNKHLQFKA 134

Query: 160 NWALQYTQTL--SSPSFHYWNKRRRSRILTRSLRFL 193
               +Y +++    P+         + +L  S  F 
Sbjct: 135 QTIDKYYRSIDKEDPTDEELFMALGASVLLESFLFY 170


>gi|57014145|gb|AAT68710.2| ribonucleoside reductase beta subunit [Borrelia hermsii]
          Length = 321

 Score = 49.1 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 35/84 (41%), Gaps = 3/84 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W+  E+P+ DD  +W   N L  +ER + ++ LG     ++   +  +  I
Sbjct: 21  FWDQNIRQFWVDEEIPISDDKLVW---NTLDGEERDVYEKVLGGLTLLDTEQGSVGMPRI 77

Query: 105 YRHLSNPECRQYLLRQAFEEAVHS 128
              + N + +  L      E +H+
Sbjct: 78  ALAIDNLDYKPVLGFMGAMEHMHA 101


>gi|71894414|ref|YP_278522.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma
           synoviae 53]
 gi|71851202|gb|AAZ43811.1| ribonucleoside-diphosphate reductase beta chain [Mycoplasma
           synoviae 53]
          Length = 339

 Score = 49.1 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 52/128 (40%), Gaps = 7/128 (5%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN-NIVL 102
           E +     N W+P ++P+ +DL  W   N +    + ++ R        +++ A    + 
Sbjct: 41  EVWNRVTQNFWLPEKIPVSNDLKSW---NEMDKSWQELLVRTFTGLTLLDTIQATLGDIA 97

Query: 103 AIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYREVPSITAKAN 160
            I   L++ E +      AF   VH+ ++  I ++L    D  +          + A+A 
Sbjct: 98  QIPNSLTDHE-QVIYANFAFMVGVHARSYGTIFSTLSNSDDIEKAHEWVINNEKLQARAK 156

Query: 161 WALQYTQT 168
           + + Y  +
Sbjct: 157 FLVPYYTS 164


>gi|325003309|ref|ZP_08124421.1| ribonucleotide-diphosphate reductase subunit beta [Pseudonocardia
           sp. P1]
          Length = 326

 Score = 49.1 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 41/110 (37%), Gaps = 15/110 (13%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
            P++       +      HW P+ +    D   +     +TDDER         F + E 
Sbjct: 29  FPMR------LFSKGNGKHWDPSAIDFTQDAEDFA---AMTDDERWQTCALAAQFMAGEE 79

Query: 95  LVANNIVLAIYRHLSNPECR----QYLLRQAFEEAVHSHTFQYIITSLGL 140
            V  ++   +       E R     YL +  +EEA H+  F+    ++G+
Sbjct: 80  SVTQDLQPFVAAM--AAEGRLGDEMYLTQFVYEEAKHTQAFRLWFDAVGM 127


>gi|90018206|gb|ABD83916.1| ribonucleotide reductase M2 polypeptide [Ictalurus punctatus]
          Length = 139

 Score = 49.1 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 7/57 (12%)

Query: 139 GLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
             D  E   LFN    +P +  KA+WAL +     +     + +R  +      + F
Sbjct: 1   IKDPKEREFLFNAVETLPCVKKKADWALNWIGNKDAQ----FGERVVAFAAVEGIFF 53


>gi|225593124|gb|ACN96043.1| ribonucleoside-diphosphate reductase beta subunit [Fischerella sp.
           MV11]
          Length = 53

 Score = 49.1 bits (116), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 28/50 (56%), Gaps = 2/50 (4%)

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD--EGELFNMYRE 151
             +H+ +PE    +  Q F+EA+H+ ++QYII ++       ++++ +  
Sbjct: 4   FKKHIPSPEIELCMAEQIFQEAMHNQSYQYIIETVVPSDRRTQVYDFWVN 53


>gi|86156146|gb|ABC86791.1| ribonucleotide reductase beta subunit [Borrelia turicatae]
          Length = 321

 Score = 48.7 bits (115), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 3/84 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W+  E+P+ DD  +W   N L  DER + ++ LG     ++   +  +  I
Sbjct: 21  FWDQNIRQFWVDEEIPISDDKLVW---NSLDIDERDVYEKVLGGLTLLDTEQGSVGMPRI 77

Query: 105 YRHLSNPECRQYLLRQAFEEAVHS 128
              + N   +  L      E +H+
Sbjct: 78  ALAIDNLAYKPVLGFMGAMEHMHA 101


>gi|85726187|gb|ABC79616.1| ribonucleotide reductase beta subunit [Borrelia hermsii DAH]
          Length = 321

 Score = 48.3 bits (114), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 35/84 (41%), Gaps = 3/84 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W+  E+P+ DD  +W   N L  +ER + ++ LG     ++   +  +  +
Sbjct: 21  FWDQNIRQFWVDEEIPISDDKLVW---NTLDGEERDVYEKVLGGLTLLDTEQGSVGMPRL 77

Query: 105 YRHLSNPECRQYLLRQAFEEAVHS 128
              + N + +  L      E +H+
Sbjct: 78  ALAIDNLDYKPVLGFMGAMEHMHA 101


>gi|289811146|ref|ZP_06541775.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 68

 Score = 48.3 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 26/60 (43%)

Query: 110 NPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
            PE   ++   AF E +HS ++ +II ++  D   +F+       I  +A     Y   L
Sbjct: 2   IPELETWVETWAFSETIHSRSYTHIIRNIVNDPAVVFDDIVTNEQIQKRAEGISAYYDEL 61


>gi|262204313|ref|YP_003275521.1| ribonucleotide reductase subunit beta-like protein [Gordonia
           bronchialis DSM 43247]
 gi|262087660|gb|ACY23628.1| Ribonucleotide reductase beta subunit-like protein [Gordonia
           bronchialis DSM 43247]
          Length = 324

 Score = 48.3 bits (114), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 37/103 (35%), Gaps = 13/103 (12%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLA 103
             +++     W P  +    D   W+    + DDER  +   +    + E  V  +    
Sbjct: 36  HLFVTGNARFWDPRGIDFSTDALDWRE---MRDDERRFVTYLVAQICAGEEAVTRD---- 88

Query: 104 IYRHLSNPEC------RQYLLRQAFEEAVHSHTFQYIITSLGL 140
           +                 YL + AFE+A H+  F+  + + GL
Sbjct: 89  VQPFGQAAAADGRLGDEMYLSQVAFEKAKHTEVFRLWMDAAGL 131


>gi|289583058|ref|YP_003481524.1| ribonucleotide reductase subunit beta [Natrialba magadii ATCC
           43099]
 gi|289532611|gb|ADD06962.1| Ribonucleotide reductase beta subunit-like protein [Natrialba
           magadii ATCC 43099]
          Length = 309

 Score = 47.9 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 37/110 (33%), Gaps = 16/110 (14%)

Query: 36  PLKY---GWAWEKYLSACN-NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFAS 91
           P+ Y     ++E Y        W P +  +  D   W+     ++ E+         F  
Sbjct: 2   PIDYSNREKSYELYRKGKREGTWDPDDYDLTQDREDWEQF---SEAEQHRFLATCSGFYD 58

Query: 92  SESLVANNIVLAIYRHLSNP---------ECRQYLLRQAFEEAVHSHTFQ 132
            E  V   +   +    + P         +   YL +Q +EEA H+  F 
Sbjct: 59  GEEDVTRTLAPYMMALDALPNDELPFDTVQEEMYLAQQVYEEAKHTDLFS 108


>gi|297529069|ref|YP_003670344.1| ribonucleotide reductase [Geobacillus sp. C56-T3]
 gi|297252321|gb|ADI25767.1| ribonucleotide reductase [Geobacillus sp. C56-T3]
          Length = 315

 Score = 47.9 bits (113), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 34/93 (36%), Gaps = 6/93 (6%)

Query: 43  WEKYLSACNN-HWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
           ++ Y  A  N  W P ++    D   +     LT +E++     +  F++ E  V  +I+
Sbjct: 34  YKLYEKAKRNGKWNPADIDFSQDKEDFA---RLTSEEKIAALPLVAGFSAGEEAVTLDIL 90

Query: 102 LAIYRHLSN--PECRQYLLRQAFEEAVHSHTFQ 132
                       E   +L     +EA H   F 
Sbjct: 91  PMTNALARQGRLEDVMFLTTFMHDEAKHVEMFS 123


>gi|219847941|ref|YP_002462374.1| ribonucleotide-diphosphate reductase subunit beta [Chloroflexus
           aggregans DSM 9485]
 gi|219542200|gb|ACL23938.1| ribonucleotide reductase [Chloroflexus aggregans DSM 9485]
          Length = 297

 Score = 47.9 bits (113), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 13/88 (14%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSN--- 110
           W P+ +    D+  W   N L+D+ER ++ R    F + E  V     L +   +     
Sbjct: 32  WNPSLLDFSRDIDDW---NRLSDEERDLLLRLTALFQAGEEAVT----LDLLPLIKAIAH 84

Query: 111 ---PECRQYLLRQAFEEAVHSHTFQYII 135
               E   +L    FEEA H+  F   I
Sbjct: 85  DGRLEEELFLTTFLFEEAKHTDFFARFI 112


>gi|269121363|ref|YP_003309540.1| ribonucleoside-diphosphate reductase [Sebaldella termitidis ATCC
           33386]
 gi|268615241|gb|ACZ09609.1| Ribonucleoside-diphosphate reductase [Sebaldella termitidis ATCC
           33386]
          Length = 331

 Score = 47.5 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 51/128 (39%), Gaps = 5/128 (3%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            +       W+ TE     D+  W   N L  + R   K+ LG     ++L ++  +  +
Sbjct: 20  FWEQNLKQFWIDTEYIPSKDIDSW---NSLEQEMREAYKKALGGLTLLDTLQSHTGMPKV 76

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAKANWA 162
             H+ + + +  L      E +H+ ++  I T++       E+FN  +E   +  KA   
Sbjct: 77  IDHIDSLQNKSVLSYMCMMETIHAKSYSTIFTTVATTPEINEIFNWVQENEYLQFKARTI 136

Query: 163 LQYTQTLS 170
             Y + L 
Sbjct: 137 DSYYRKLD 144


>gi|70607929|ref|YP_256799.1| ribonucleotide-diphosphate reductase subunit beta [Sulfolobus
           acidocaldarius DSM 639]
 gi|68568577|gb|AAY81506.1| hypothetical protein Saci_2220 [Sulfolobus acidocaldarius DSM 639]
          Length = 345

 Score = 47.5 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 45/104 (43%), Gaps = 9/104 (8%)

Query: 45  KYLSACNNHWMP---TEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIV 101
            +  +    W P    E+ +Q D   W++   +++ ER + +     F++ E  V+  + 
Sbjct: 34  LWAKSNELFWSPLQFKEL-IQQDKQDWET---MSESEREISEYIATAFSAGEEAVSRYLA 89

Query: 102 LAI--YRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
             +     L   E   +L +   EE  H+  F+  + S+G+D+ 
Sbjct: 90  ELVIALDELGYTEEVLFLNQFQQEETRHTDAFRRWMDSIGMDKD 133


>gi|213028365|ref|ZP_03342812.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
          enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 73

 Score = 47.5 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 28/65 (43%), Gaps = 3/65 (4%)

Query: 33 QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
              ++     E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10 NWNKIQDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSAAEQQLTIRVFTGLTLL 66

Query: 93 ESLVA 97
          +++  
Sbjct: 67 DTIQN 71


>gi|207345015|gb|EDZ71971.1| YGR180Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 224

 Score = 47.5 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/76 (11%), Positives = 23/76 (30%), Gaps = 14/76 (18%)

Query: 122 FEEAVHSHTFQYIITSLGLDEGEL--FNMYREVPSITAKANWALQYTQTLSSPSFHYWNK 179
             E ++S  +  ++ +   D   +  F     +P +  K  +  ++              
Sbjct: 1   MMENIYSEVYSMMVDAFFKDPKNIPLFKEIANLPEVKHKTAFIERWISN----------- 49

Query: 180 RRRSRILTRSLRFLCR 195
              S    R + F  +
Sbjct: 50  -DDSLYAERLVAFAAK 64


>gi|68010653|ref|XP_670832.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56486449|emb|CAH96459.1| hypothetical protein PB000804.01.0 [Plasmodium berghei]
          Length = 65

 Score = 47.1 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 19/42 (45%)

Query: 15 KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMP 56
          ++    ++++LN  S+   L P+ Y   W  Y  A  + W  
Sbjct: 24 QKTKESNEKILNKESNRFTLHPIIYPEVWNFYKKAEASFWTA 65


>gi|284046663|ref|YP_003397003.1| ribonucleotide reductase [Conexibacter woesei DSM 14684]
 gi|283950884|gb|ADB53628.1| ribonucleotide reductase [Conexibacter woesei DSM 14684]
          Length = 306

 Score = 47.1 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 33/93 (35%), Gaps = 6/93 (6%)

Query: 39  YGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN 98
           YG  +  +      HW   ++    D   W  +    ++ER      L  F   E  VA 
Sbjct: 36  YGELYSLWERQ---HWAVQDLDFTQDKLDWHERFD--EEERFARMYGLSAFFIGEQRVAA 90

Query: 99  NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
            +   + R     + R +L  Q  +EA H   F
Sbjct: 91  ELG-PLMRAAPQEDMRLFLCTQIADEARHVAFF 122


>gi|162448128|ref|YP_001621260.1| ribonucleoside-diphosphate reductase subunit beta [Acholeplasma
           laidlawii PG-8A]
 gi|161986235|gb|ABX81884.1| ribonucleoside-diphosphate reductase, beta chain [Acholeplasma
           laidlawii PG-8A]
          Length = 369

 Score = 47.1 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 45/115 (39%), Gaps = 20/115 (17%)

Query: 44  EKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES--------L 95
             Y    +  W P +V +Q DL +W   + L ++ +    +NL      ++        +
Sbjct: 36  HFYEQNLSQFWRPEDVSLQPDLNVW---SVLPENIQDAYAKNLLVLTFLDTHQGDIGMPV 92

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEA-VHSHTFQYIITSLGLDE--GELFN 147
           V+ ++    ++       +  L      E  VH+ ++  I  +   ++   ELF+
Sbjct: 93  VSRSLDDHFHQR------KAVLNFMGAMENAVHAKSYSNIFMTYMSNQKIDELFH 141


>gi|269865524|ref|XP_002651954.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
 gi|220063427|gb|EED42101.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
           bieneusi H348]
          Length = 205

 Score = 47.1 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 20/50 (40%), Gaps = 13/50 (26%)

Query: 145 LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFLC 194
           LFN    +PSI  KA WA ++  +              +   TR + F C
Sbjct: 13  LFNAIENIPSIRKKALWAQKWIAS-------------DTSFDTRCVAFAC 49


>gi|166367087|ref|YP_001659360.1| ribonucleoside-diphosphate reductase beta chain [Microcystis
          aeruginosa NIES-843]
 gi|166089460|dbj|BAG04168.1| ribonucleoside-diphosphate reductase beta chain [Microcystis
          aeruginosa NIES-843]
          Length = 64

 Score = 47.1 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 7  LSPIQAGEKRVNVDDKRMLNARS-DVNQLLPLKYGWAWEKYLSACNNHWM 55
          +SPI        ++++ +    + ++ QL  ++Y WA   Y     N W+
Sbjct: 14 ISPIFNPAGDDAIENRSIWFGNTTNLMQLNDVRYTWAVGLYQQMRENFWI 63


>gi|21686785|ref|NP_663285.1| ribonucleotide reductase 2a [Phthorimaea operculella granulovirus]
 gi|21637101|gb|AAM70318.1| ribonucleotide reductase 2a [Phthorimaea operculella granulovirus]
          Length = 345

 Score = 46.8 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 37/105 (35%), Gaps = 7/105 (6%)

Query: 33  QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
           Q+ P  Y  +W  Y     NHW   E    DDL+ ++    +T   +  + ++    A  
Sbjct: 35  QIWPPSYYPSWFYYQQHQANHWFANEHDPLDDLSGFEK---ITPAWQNALLQSFAALAIG 91

Query: 93  ESLVANNIVLAIYRHLSNPE-CRQYLLRQAFEEAVHSHTFQYIIT 136
           +  V   I       L   E  +     QA  E  H   +  ++ 
Sbjct: 92  DDKVMCLISEN---ELQWEESTKWMFADQAARETTHKIAYNRMLE 133


>gi|70607921|ref|YP_256791.1| ribonucleotide-diphosphate reductase subunit beta [Sulfolobus
           acidocaldarius DSM 639]
 gi|68568569|gb|AAY81498.1| ribonucleotide reductase, small chain [Sulfolobus acidocaldarius
           DSM 639]
          Length = 330

 Score = 46.8 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 44/121 (36%), Gaps = 11/121 (9%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
            P++       +       W   E+    D   WK    L   +R   K    +F + E 
Sbjct: 32  FPMR------LFEIGEKFRWTAYELDFSKDREDWKK---LKPSDRTQNKIISSYFLAGEE 82

Query: 95  LVANNI--VLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
            VA +I  +      L   E   YL + A +EA H+  F+    S+G  EG     Y+  
Sbjct: 83  CVARDILPLANAMEELGLIEEALYLTQFARDEANHTVAFRKWFESVGETEGIYDFTYKNE 142

Query: 153 P 153
           P
Sbjct: 143 P 143


>gi|284176152|ref|YP_003406429.1| Ribonucleotide reductase beta subunit-like protein [Haloterrigena
           turkmenica DSM 5511]
 gi|284017809|gb|ADB63756.1| Ribonucleotide reductase beta subunit-like protein [Haloterrigena
           turkmenica DSM 5511]
          Length = 302

 Score = 46.8 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 4/87 (4%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            Y +A   HW P E+ ++ D    +    L D     +K++L  F + E  V  ++   +
Sbjct: 22  YYRNAVEKHWDPHEIDLEADR---EGATDLPDPAFEGLKQSLALFGAGEESVTEDLA-PL 77

Query: 105 YRHLSNPECRQYLLRQAFEEAVHSHTF 131
              L + E + ++  Q +EE+ H+  F
Sbjct: 78  AVVLEDIEDQLFITTQLYEESKHTDFF 104


>gi|261418216|ref|YP_003251898.1| ribonucleotide-diphosphate reductase subunit beta [Geobacillus sp.
           Y412MC61]
 gi|319767824|ref|YP_004133325.1| ribonucleotide reductase [Geobacillus sp. Y412MC52]
 gi|261374673|gb|ACX77416.1| ribonucleotide reductase [Geobacillus sp. Y412MC61]
 gi|317112690|gb|ADU95182.1| ribonucleotide reductase [Geobacillus sp. Y412MC52]
          Length = 302

 Score = 46.8 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 35/93 (37%), Gaps = 6/93 (6%)

Query: 43  WEKYLSACNN-HWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA-NNI 100
           ++ Y  A  N  W P ++    D   +     LT +E++     +  F++ E  V  + +
Sbjct: 21  YKLYEKAKRNGKWNPADIDFSQDKEDFA---RLTSEEKIAALPLVAGFSAGEEAVTLDIL 77

Query: 101 VLAIYRHLS-NPECRQYLLRQAFEEAVHSHTFQ 132
            +A         E   +L     +EA H   F 
Sbjct: 78  PMAHALARQGRLEDVMFLTTFMHDEAKHVEMFS 110


>gi|294877483|ref|XP_002768004.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
           ATCC 50983]
 gi|239870142|gb|EER00722.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
           ATCC 50983]
          Length = 247

 Score = 46.8 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 20/62 (32%), Gaps = 16/62 (25%)

Query: 136 TSLGLDEGE---LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
            +   D  E   +F     +PS+  KA WAL +                 +    R + +
Sbjct: 38  NTFIEDAQEKERIFEAIETIPSVQHKAEWALAWIND-------------DNCFAERLVAY 84

Query: 193 LC 194
            C
Sbjct: 85  AC 86


>gi|284046710|ref|YP_003397050.1| sterol-binding domain protein [Conexibacter woesei DSM 14684]
 gi|283950931|gb|ADB53675.1| Sterol-binding domain protein [Conexibacter woesei DSM 14684]
          Length = 419

 Score = 46.4 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 12/95 (12%)

Query: 37  LKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
           + Y   + ++      +W  TE+    D   W+ +      ER     N   F   E  V
Sbjct: 10  ISYEDLYARWERG---NWRATEIDFTADSEQWQERFD--AFERRAALWNYSLFFHGEDAV 64

Query: 97  ANNIVLAIYRHLSNP---ECRQYLLRQAFEEAVHS 128
           A+N+      ++      E + +L  Q  +EA H+
Sbjct: 65  ADNL----SPYIDAAPLEEQKYFLTTQQVDEARHA 95


>gi|213621399|ref|ZP_03374182.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
          enterica subsp. enterica serovar Typhi str. E98-2068]
          Length = 70

 Score = 46.4 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 28/64 (43%), Gaps = 3/64 (4%)

Query: 33 QLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASS 92
              ++     E +    +N W+P +VP+ +D+  W++   L+  E+ +  R        
Sbjct: 10 NWNKIQDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQT---LSAAEQQLTIRVFTGLTLL 66

Query: 93 ESLV 96
          +++ 
Sbjct: 67 DTIQ 70


>gi|26553540|ref|NP_757474.1| ribonucleotide-diphosphate reductase subunit beta [Mycoplasma
           penetrans HF-2]
 gi|26453546|dbj|BAC43878.1| ribonucleotide diphosphate reductase subunit beta [Mycoplasma
           penetrans HF-2]
          Length = 339

 Score = 46.4 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 53/148 (35%), Gaps = 7/148 (4%)

Query: 22  KRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLM 81
           K  L  +        +      E +     N W+P ++ + +DL  W   N L  + + +
Sbjct: 19  KDGLKGKMRSVNWNFINDDKDLEVWNRITQNFWLPEKIAISNDLPSW---NKLDSNWQEL 75

Query: 82  IKRNLGFFASSESLVAN-NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL 140
           + R        +S+ A    V  +   L++ E +      AF   VH+ ++  I ++   
Sbjct: 76  VVRTFTGLTLLDSIQATIGDVAQVKNSLTDHE-QVIYTNFAFMVGVHARSYGSIFSTFCS 134

Query: 141 DE--GELFNMYREVPSITAKANWALQYT 166
            +      +      S+  +A   + Y 
Sbjct: 135 SDQINSAHDWVVNCESLQKRAQVLIPYY 162


>gi|302530556|ref|ZP_07282898.1| ribonucleotide-diphosphate reductase subunit beta [Streptomyces sp.
           AA4]
 gi|302439451|gb|EFL11267.1| ribonucleotide-diphosphate reductase subunit beta [Streptomyces sp.
           AA4]
          Length = 323

 Score = 46.0 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 41/102 (40%), Gaps = 7/102 (6%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            ++      W P ++    +   W   + LT +++      +  F + E  V  +I    
Sbjct: 29  LFVKGNKKFWNPADLDFSKEREGW---DSLTPEQQRSTTYLVAQFIAGEEAVTEDI-QPF 84

Query: 105 YRHLSNPE---CRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
            R +S         YL +  FEEA H   F+  + ++GLD+ 
Sbjct: 85  MRAMSATGRFGDEMYLTQFCFEEAKHVEVFRRWMDAVGLDDD 126


>gi|213420353|ref|ZP_03353419.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
          Length = 150

 Score = 46.0 bits (108), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 22/50 (44%)

Query: 120 QAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
            AF E +HS ++ +II ++  D   +F+       I  +A     Y   L
Sbjct: 3   WAFSETIHSRSYTHIIRNIVNDPAVVFDDIVTNEQIQKRAEGISAYYDEL 52


>gi|300790300|ref|YP_003770591.1| ribonucleoside-diphosphate reductase beta chain [Amycolatopsis
           mediterranei U32]
 gi|299799814|gb|ADJ50189.1| ribonucleoside-diphosphate reductase beta chain [Amycolatopsis
           mediterranei U32]
          Length = 322

 Score = 45.6 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 40/102 (39%), Gaps = 7/102 (6%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            ++      W P ++    +   W   + L  +++      +  F + E  V  +I    
Sbjct: 29  LFVKGNKKFWNPADIDFSREREGW---DTLNPEQQRSTTYLVAQFIAGEEAVTEDI-QPF 84

Query: 105 YRHLSNPE---CRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
            R +S         YL +  FEEA H+  F+  + ++GL E 
Sbjct: 85  MRAMSATGRFGDEMYLTQFCFEEAKHTEVFRRWMDAVGLTED 126


>gi|38232564|gb|AAR15079.1| ribonucleotide reductase R2 subunit variant [Aedes albopictus]
          Length = 219

 Score = 45.6 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 4/48 (8%)

Query: 145 LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           LFN    +P +  KA+WAL +  +  +     + +R  +      + F
Sbjct: 23  LFNAIDNLPCVKKKADWALNWISSKQA----NFGERVVAFAAVEGIFF 66


>gi|209523559|ref|ZP_03272113.1| hypothetical protein AmaxDRAFT_0931 [Arthrospira maxima CS-328]
 gi|209495964|gb|EDZ96265.1| hypothetical protein AmaxDRAFT_0931 [Arthrospira maxima CS-328]
 gi|291570482|dbj|BAI92754.1| ribonucleoside-diphosphate reductase beta chain, fragment
          [Arthrospira platensis NIES-39]
          Length = 70

 Score = 45.6 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 3  NNTGLSPIQAGEKRVNVDDKRML-NARSDVNQLLPLKYGWAWEKYLSACNNHWM 55
          N   L+PI   +   +V  + M     +++ QL  ++Y WA   Y     N W+
Sbjct: 16 NKMPLNPIFNPDGNDDVAHRSMWFGETTNLMQLNDVRYSWAVGLYKQMRENFWV 69


>gi|213021870|ref|ZP_03336317.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 277

 Score = 45.6 bits (107), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 24/56 (42%)

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTL 169
             ++   AF E +HS ++ +II ++  D   +F+       I  +A     Y   L
Sbjct: 7   ETWVETWAFSETIHSRSYTHIIRNIVNDPAVVFDDIVTNEQIQKRAEGISAYYDEL 62


>gi|60416888|emb|CAD71206.1| ribonucleoside-diphospate reductase small subunit [Bacillus
           subtilis]
          Length = 98

 Score = 45.2 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 24/64 (37%), Gaps = 3/64 (4%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAI 104
            Y       W+P E+ +  DL  WK    L  +E+    + L      ++   N  +  +
Sbjct: 26  FYNQNVKQFWLPEEIALNGDLLTWK---YLGKNEQDTYMKVLAGLTLLDTEQGNTGMPIV 82

Query: 105 YRHL 108
             H+
Sbjct: 83  AEHV 86


>gi|332031690|gb|EGI71130.1| Ribonucleoside-diphosphate reductase subunit M2 [Acromyrmex
           echinatior]
          Length = 210

 Score = 44.8 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 4/48 (8%)

Query: 145 LFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           LFN    +P +  KANWAL +    S+     + +R  +      + F
Sbjct: 10  LFNAIETLPCVRKKANWALNWINHESA----TFPERVVAFAAVEGIFF 53


>gi|284051982|ref|ZP_06382192.1| ribonucleoside-diphosphate reductase, beta subunit [Arthrospira
          platensis str. Paraca]
          Length = 53

 Score = 44.8 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 7  LSPIQAGEKRVNVDDKRML-NARSDVNQLLPLKYGWAWEKYLSACNNHWM 55
          L+PI   +   +V  + M     +++ QL  ++Y WA   Y     N W+
Sbjct: 3  LNPIFNPDGNDDVAHRSMWFGETTNLMQLNDVRYSWAVGLYKQMRENFWV 52


>gi|256378482|ref|YP_003102142.1| ribonucleotide reductase [Actinosynnema mirum DSM 43827]
 gi|255922785|gb|ACU38296.1| ribonucleotide reductase [Actinosynnema mirum DSM 43827]
          Length = 320

 Score = 44.8 bits (105), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 7/91 (7%)

Query: 38  KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           +Y   +++Y +     W   ++    D   W++K  +TD ER         F  +E  V 
Sbjct: 41  EYIDLYKRYFTHR---WNAYDLDFSQDAVDWRTK--MTDVERKAFTEIAAAFHHAERQVE 95

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHS 128
             +   I+    + E + YL  Q  +EA H+
Sbjct: 96  VELP--IFMLTGSEEAKMYLCTQLEDEARHT 124


>gi|229544146|ref|ZP_04433205.1| ribonucleotide reductase [Bacillus coagulans 36D1]
 gi|229325285|gb|EEN90961.1| ribonucleotide reductase [Bacillus coagulans 36D1]
          Length = 301

 Score = 43.7 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 42/110 (38%), Gaps = 9/110 (8%)

Query: 29  SDVNQLLPLKYGW---AWEKYLSACNNH-WMPTEVPMQDDLALWKSKNGLTDDERLMIKR 84
            +  Q +  +  W    ++ Y  A  N  W P ++    D   +     L ++ER+    
Sbjct: 3   HERFQTVEGQINWNDPMYKLYEKAKRNGGWNPADIDFSQDREDFLQ---LREEERIASLP 59

Query: 85  NLGFFASSESLVANNIVLAIYRHLSN--PECRQYLLRQAFEEAVHSHTFQ 132
            +  F++ E  V  +I+  ++        E   +L     +EA H+  F 
Sbjct: 60  LISSFSAGEEAVTLDILPMLHAMARQGRLEDTMFLTTFLHDEAKHTEMFS 109


>gi|9631114|ref|NP_047784.1| ribonucleotide reductase small subunit homolog [Lymantria dispar
           MNPV]
 gi|3822382|gb|AAC70333.1| ribonucleotide reductase small subunit homolog [Lymantria dispar
           MNPV]
          Length = 359

 Score = 43.7 bits (102), Expect = 0.014,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 40/130 (30%), Gaps = 5/130 (3%)

Query: 26  NARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN 85
               +  Q+ P KYG +W  Y     N+W   E    DD+        L  + +    R+
Sbjct: 28  GPTGNALQIWPPKYGLSWSFYKDHQANYWSAEEHDPLDDIN---GFVKLPREWQNAALRS 84

Query: 86  LGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGEL 145
               A  +  V   I  +      + E       Q   E VH   +  ++         +
Sbjct: 85  FAVLAIGDDAVMKFIDESGLEWEESTE--WLFKDQGARETVHKIVYNKMLQLANHSRDYV 142

Query: 146 FNMYREVPSI 155
            N +     +
Sbjct: 143 MNSFTSDDFV 152


>gi|46309416|ref|YP_006306.1| ORF38 [Agrotis segetum granulovirus]
 gi|46200633|gb|AAS82700.1| ORF38 [Agrotis segetum granulovirus]
          Length = 369

 Score = 43.3 bits (101), Expect = 0.017,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 42/122 (34%), Gaps = 7/122 (5%)

Query: 15  KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
            R+  D     N+ + V ++ P  Y  +W  Y     N+W  TE    + L        L
Sbjct: 19  PRLEEDLPEYNNSETLVLKIWPPTYAPSWHYYQLHQANYWSATE---HEPLEDVSGFIKL 75

Query: 75  TDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLR-QAFEEAVHSHTFQY 133
               +  +  +    A  +  V   I           EC Q++ + Q   E +H   +  
Sbjct: 76  DSQWQKAVLHSFAILAIGDDAVMQFIDENDLEW---EECTQWMFKDQGARETIHKIVYNK 132

Query: 134 II 135
           ++
Sbjct: 133 ML 134


>gi|309806472|ref|ZP_07700477.1| hypothetical protein HMPREF9212_1388 [Lactobacillus iners LactinV
          03V1-b]
 gi|308167145|gb|EFO69319.1| hypothetical protein HMPREF9212_1388 [Lactobacillus iners LactinV
          03V1-b]
          Length = 103

 Score = 42.9 bits (100), Expect = 0.022,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 3/70 (4%)

Query: 28 RSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLG 87
                   +      E +     N W+P ++P+ +DL  W   N L+ D + +I R   
Sbjct: 23 NMRSINWNKIDDDKDLEVWNRVTQNFWLPEKIPVSNDLPSW---NSLSKDWQQLITRTFT 79

Query: 88 FFASSESLVA 97
               +++ A
Sbjct: 80 GLTLLDTIQA 89


>gi|56421306|ref|YP_148624.1| ribonucleotide-diphosphate reductase subunit beta [Geobacillus
           kaustophilus HTA426]
 gi|10800082|dbj|BAB16601.1| unnamed protein product [Geobacillus thermoleovorans]
 gi|56381148|dbj|BAD77056.1| ribonuleotide reductase small subunit [Geobacillus kaustophilus
           HTA426]
          Length = 302

 Score = 42.9 bits (100), Expect = 0.024,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 6/93 (6%)

Query: 43  WEKYLSACNN-HWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA-NNI 100
           ++ Y  A  N  W P ++    D   + S   LT +E++     +  F++ E  V  + +
Sbjct: 21  FKLYEKAKRNGKWNPADIDFSQDQKDFAS---LTSEEKISALPLVAGFSAGEEAVTLDIL 77

Query: 101 VLAIYRHLS-NPECRQYLLRQAFEEAVHSHTFQ 132
            +A         E   +L     +EA H   F 
Sbjct: 78  PMAHALARQGRLEDVLFLTTFMHDEAKHVEMFS 110


>gi|320450283|ref|YP_004202379.1| ribonucleoside-diphosphate reductase subunit beta [Thermus
           scotoductus SA-01]
 gi|320150452|gb|ADW21830.1| ribonucleoside-diphosphate reductase, subunit beta [Thermus
           scotoductus SA-01]
          Length = 323

 Score = 42.1 bits (98), Expect = 0.035,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 49/126 (38%), Gaps = 7/126 (5%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSES 94
            P +Y        +  +++W+ TE     D+  +        + R +++R+L   A S+ 
Sbjct: 10  RPYEYPRLLAYRDAIRHSYWLHTEFSYAADVQDYALAG---PEVRSLVERSL--LAISQV 64

Query: 95  LVANNIV-LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREVP 153
            ++  +     Y     PE  +  +  A  E  H++ + +++  L L E        +  
Sbjct: 65  ELSVKLFWARTYEVFPKPEVAEVGMTFAESEVRHANAYAHLLDLLAL-EDRFAQALEKET 123

Query: 154 SITAKA 159
           ++  + 
Sbjct: 124 ALRERH 129


>gi|9629972|ref|NP_046190.1| ribonucleotide reductase small subunit [Orgyia pseudotsugata MNPV]
 gi|1911280|gb|AAC59033.1| ribonucleotide reductase small subunit [Orgyia pseudotsugata MNPV]
          Length = 349

 Score = 42.1 bits (98), Expect = 0.036,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 38/106 (35%), Gaps = 5/106 (4%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           +  Q+ P KYG ++  Y     N+W   E    DD+        L  + +  + R+    
Sbjct: 36  NALQIWPPKYGLSYAFYKDHQANYWSAEEHDPLDDIN---GFVKLPREWQNAVLRSFAVL 92

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYII 135
           A  +  V   I  +  +   + E       Q   E VH   +  ++
Sbjct: 93  AIGDDAVMKFIDESGLKWEESTE--WLFKDQGARETVHKIVYNKML 136


>gi|300710888|ref|YP_003736702.1| Ribonucleotide reductase beta subunit-like protein [Halalkalicoccus
           jeotgali B3]
 gi|299124571|gb|ADJ14910.1| Ribonucleotide reductase beta subunit-like protein [Halalkalicoccus
           jeotgali B3]
          Length = 297

 Score = 42.1 bits (98), Expect = 0.038,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 40/97 (41%), Gaps = 4/97 (4%)

Query: 48  SACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRH 107
           +A   HW P E+ +  D       +G T      ++R L  F + E+ V  ++   +   
Sbjct: 23  NAVERHWDPAEIDLSVDRERLSQLDGAT---FTDLRRTLALFGAGEAAVTEDLA-PLAVV 78

Query: 108 LSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGE 144
           L   E + ++  Q +EEA H+  F     ++     E
Sbjct: 79  LEGIEDQMFVTTQLYEEAKHADFFDRYWRAVIHPAEE 115


>gi|46255232|ref|YP_006144.1| ribonucleoside-diphosphate reductase beta chain [Thermus
           thermophilus HB27]
 gi|46198081|gb|AAS82491.1| ribonucleoside-diphosphate reductase beta chain [Thermus
           thermophilus HB27]
          Length = 324

 Score = 41.8 bits (97), Expect = 0.045,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 41/104 (39%), Gaps = 6/104 (5%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
                P +Y        +  +++W+ TE   Q DL          + ER +++R L   A
Sbjct: 7   RLAYRPYEYPELLRFRDAIRHSYWVHTEFSFQSDLQD---HALADEKERSLVERAL--LA 61

Query: 91  SSESLVANNIV-LAIYRHLSNPECRQYLLRQAFEEAVHSHTFQY 133
            ++  +A  +    +Y     PE  +  L  A  E  H++ + +
Sbjct: 62  IAQVELAVKLFWARVYDRFPKPEIAEVGLTFAESEVRHANAYAH 105


>gi|295398338|ref|ZP_06808380.1| ribonucleotide-diphosphate reductase subunit beta [Aerococcus
           viridans ATCC 11563]
 gi|294973477|gb|EFG49262.1| ribonucleotide-diphosphate reductase subunit beta [Aerococcus
           viridans ATCC 11563]
          Length = 332

 Score = 41.8 bits (97), Expect = 0.050,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 45/117 (38%), Gaps = 5/117 (4%)

Query: 46  YLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIY 105
           +  A +  W+ T VP+++D + W +   L   E+  + R L    +  +  +N +   I 
Sbjct: 40  WERATSLFWLDTRVPIENDRSKWAN---LQLQEQEQLNRLLILLTNIATYQSNELGEIIR 96

Query: 106 RHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD--EGELFNMYREVPSITAKAN 160
               + +    +    F E VH+  +  I++    D    + F+     P +     
Sbjct: 97  DSARSQQEIAIINNFQFTEMVHTKAYNRILSIFNQDIGSQKAFDWVDTNPQVRDYIE 153


>gi|220905808|ref|YP_002481119.1| signal transduction histidine kinase, nitrogen specific, NtrB
           [Cyanothece sp. PCC 7425]
 gi|219862419|gb|ACL42758.1| signal transduction histidine kinase, nitrogen specific, NtrB
           [Cyanothece sp. PCC 7425]
          Length = 1081

 Score = 41.8 bits (97), Expect = 0.058,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 4/59 (6%)

Query: 40  GWAWEKYLSACNNHW--MPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLV 96
            WA+E Y   C   W   P E  +  D  LW S+    D ER++      FF  S+  V
Sbjct: 344 DWAYEYYSKGCEALWGYTPEE--LMADKNLWLSRLFPEDRERILEPLFTAFFTESKIEV 400


>gi|218296962|ref|ZP_03497648.1| ribonucleotide reductase [Thermus aquaticus Y51MC23]
 gi|218242665|gb|EED09201.1| ribonucleotide reductase [Thermus aquaticus Y51MC23]
          Length = 323

 Score = 41.4 bits (96), Expect = 0.060,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 42/111 (37%), Gaps = 4/111 (3%)

Query: 31  VNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA 90
                P +Y        +  +++W+ TE     D+             + +++R+L   A
Sbjct: 6   RRAYRPYEYPGLLRFRDAIRHSYWVHTEFSYSADVQD---HALAEPPVQSLVERSLLAIA 62

Query: 91  SSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLD 141
             E  V       +Y     PE  +  +  A  E  H++ + +++  LGL+
Sbjct: 63  QVELSVKLFWA-RVYDRFPKPEVAEVGMTFAESEVRHANAYAHLLDLLGLE 112


>gi|88861512|ref|ZP_01136127.1| ribonucleotide-diphosphate reductase beta subunit
           [Pseudoalteromonas tunicata D2]
 gi|88816487|gb|EAR26327.1| ribonucleotide-diphosphate reductase beta subunit
           [Pseudoalteromonas tunicata D2]
          Length = 219

 Score = 41.0 bits (95), Expect = 0.098,   Method: Composition-based stats.
 Identities = 5/39 (12%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 127 HSHTFQYIITSLGLDEGELFNMYREVPSITAKANWALQY 165
           H   + +++ ++G+ E E ++ + +   +  K ++   +
Sbjct: 1   HVAAYSHLLDTIGMPESE-YSAFMKYKEMKDKYDYMQGF 38


>gi|169842043|ref|ZP_02875148.1| ribonucleotide-diphosphate reductase subunit beta [candidate
           division TM7 single-cell isolate TM7a]
          Length = 66

 Score = 40.6 bits (94), Expect = 0.12,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 23/64 (35%)

Query: 129 HTFQYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
            TF+YII +   +  E++       S+  KA +  +Y   +            +   +  
Sbjct: 1   MTFEYIIETFPFNREEIYAAGWGKKSLADKAAFQTKYVTRMMEERPDVTTTEGKKDFVRN 60

Query: 189 SLRF 192
            + +
Sbjct: 61  LVAY 64


>gi|76802850|ref|YP_330945.1| ribonucleoside-diphosphate reductase, beta subunit 3 [Natronomonas
           pharaonis DSM 2160]
 gi|76558715|emb|CAI50308.1| probable ribonucleoside-diphosphate reductase, beta subunit 3
           [Natronomonas pharaonis DSM 2160]
          Length = 316

 Score = 40.2 bits (93), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 37/91 (40%), Gaps = 5/91 (5%)

Query: 45  KYLSACNNHWMP-TEVP---MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNI 100
            +  A  NHW P  ++    ++ D       +   + E   + R L  F + E  V  ++
Sbjct: 22  YFKHAVYNHWDPYEDIEKALIEQDRKRLIDADEFGETEFEDLMRTLALFGAGEEAVTEDL 81

Query: 101 VLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
              +   + +   + ++  Q +EEA H+  F
Sbjct: 82  A-PLMLVVDDINDQMFVSSQIYEEAKHTQFF 111


>gi|29135241|ref|NP_803871.1| ORF305 [Pseudomonas phage phiKZ]
 gi|18996770|gb|AAL83206.1|AF399011_305 PHIKZ305 [Pseudomonas phage phiKZ]
          Length = 387

 Score = 40.2 bits (93), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 53/151 (35%), Gaps = 3/151 (1%)

Query: 8   SPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLAL 67
             I    K      + +L     +   +   Y   WE Y       W   E      L  
Sbjct: 9   KKIFNVAKSDYHLPEIILGDDPGLLDSIHTHYPKMWELYKRLKMLDWDELEFDFSTCLVE 68

Query: 68  WKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVH 127
           +++ +  T D   M+ + L +   ++S+ + +IV  +   +++       +R    E VH
Sbjct: 69  FETCDKSTYD---MMIKTLAWQWEADSVASRSIVNILSPVMTDSRVWAGYVRINDNEDVH 125

Query: 128 SHTFQYIITSLGLDEGELFNMYREVPSITAK 158
           + T+  I+ +   D   + +    V     +
Sbjct: 126 ALTYSEIVRNSFKDPKVILDEILRVEEAQER 156


>gi|293556438|ref|ZP_06675016.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1039]
 gi|291601402|gb|EFF31676.1| ribonucleoside-diphosphate reductase, beta subunit [Enterococcus
           faecium E1039]
          Length = 317

 Score = 40.2 bits (93), Expect = 0.16,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 5/114 (4%)

Query: 46  YLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIY 105
           +  A +  W+ T +P+++D   W+    L+  ER  + R L F A+  +  +   V  I 
Sbjct: 25  WERATSLFWLDTRIPIEEDREKWEK---LSLQERKQLNRLLLFLANLSTYQSIESVEVIR 81

Query: 106 RHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYREVPSITA 157
               + +    L    F E V++  +  I+       D  E F+     P +  
Sbjct: 82  NSERSQQEIAILNNLQFTEMVNTKAYNRILRVFNKEIDLQEEFDWIDTEPLVRE 135


>gi|328958551|ref|YP_004375937.1| ribonucleoside-diphosphate reductase subunit beta [Carnobacterium
           sp. 17-4]
 gi|328674875|gb|AEB30921.1| ribonucleoside-diphosphate reductase subunit beta [Carnobacterium
           sp. 17-4]
          Length = 328

 Score = 39.8 bits (92), Expect = 0.17,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 41/99 (41%), Gaps = 5/99 (5%)

Query: 46  YLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIY 105
           +    +  W+ T +P+ ++ + W+    L ++ER +  + L   AS  +  +    + I 
Sbjct: 32  WEKLTSLFWLDTRIPVTNEKSQWED---LPENERKVFLKTLAGLASVATFQSERGFMVIE 88

Query: 106 R-HLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEG 143
               +  E   Y   Q F E+VH+  +  I+      + 
Sbjct: 89  EGEHTQQEAAIYNNIQ-FIESVHAKAYNTILIGFNEPKE 126


>gi|254781153|ref|YP_003065566.1| hypothetical protein CLIBASIA_05300 [Candidatus Liberibacter
          asiaticus str. psy62]
 gi|254040830|gb|ACT57626.1| hypothetical protein CLIBASIA_05300 [Candidatus Liberibacter
          asiaticus str. psy62]
          Length = 30

 Score = 39.1 bits (90), Expect = 0.35,   Method: Composition-based stats.
 Identities = 24/26 (92%), Positives = 25/26 (96%)

Query: 1  MANNTGLSPIQAGEKRVNVDDKRMLN 26
          MANNTGLSPIQAGEKRVNVDDKR+L 
Sbjct: 1  MANNTGLSPIQAGEKRVNVDDKRILT 26


>gi|14602365|ref|NP_148912.1| ORF128 RR2A [Cydia pomonella granulovirus]
 gi|14591883|gb|AAK70788.1|U53466_128 ORF128 RR2A [Cydia pomonella granulovirus]
          Length = 362

 Score = 39.1 bits (90), Expect = 0.35,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 33/107 (30%), Gaps = 5/107 (4%)

Query: 30  DVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFF 89
           +  ++ P  Y  +W   +    NHW   E      +      + +    +  + ++    
Sbjct: 34  NRLKIWPPTYTPSWNYLVEHQINHWYANE---HKPMDDLNGFDKIDSAWQNALLQSFAVL 90

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
           A  +  V + I  +          +     QA  E  H   +  ++ 
Sbjct: 91  AIGDDKVMDLISNSDIEW--EESTKWMFADQAARETTHKIVYNRMLE 135


>gi|268320098|ref|YP_003293754.1| ribonucleoside-diphosphate reductase beta chain [Lactobacillus
           johnsonii FI9785]
 gi|262398473|emb|CAX67487.1| ribonucleoside-diphosphate reductase beta chain [Lactobacillus
           johnsonii FI9785]
          Length = 313

 Score = 39.1 bits (90), Expect = 0.38,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 44/137 (32%), Gaps = 19/137 (13%)

Query: 51  NNHW-MPTE-VPMQD-----DL----------ALWKSKNGLTDDERLMIKRNLGFFASSE 93
            N+W    E V         D+             K    L  +E+ +I  + G    S 
Sbjct: 9   ANNWNTVEEQVDHSAWARLNDIVYEPRRVPIYKDQKEFLHLPKNEQTVILHSFGSLTLSS 68

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYRE 151
           +L     +  I +   N E         + E++++  + Y++        + + +    +
Sbjct: 69  TLQMKVALSEIKKDAENSEEVAVYNALQYLESINNKAYSYVLAEFSDSKKQEDAYEWANQ 128

Query: 152 VPSITAKANWALQYTQT 168
            P +  K  +     Q+
Sbjct: 129 NPYLQKKMKFLNTVYQS 145


>gi|313116866|ref|YP_004037990.1| hypothetical protein Hbor_33300 [Halogeometricum borinquense DSM
           11551]
 gi|312294818|gb|ADQ68854.1| hypothetical protein Hbor_33300 [Halogeometricum borinquense DSM
           11551]
          Length = 317

 Score = 38.7 bits (89), Expect = 0.45,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 44/94 (46%), Gaps = 5/94 (5%)

Query: 42  AWEKYLSACNNHWMP-TEVP---MQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVA 97
           A   + +A   HW P  ++P   +++D     + + L + +  +++  +  F + E  V 
Sbjct: 18  AHGYFKNAVYRHWDPSEDIPQTLLKEDRTNLLTTDDLDEQQFDLLRSQIALFGAGEEAVT 77

Query: 98  NNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
            ++   +   L + + + ++  Q +EEA H+  F
Sbjct: 78  EDLA-PLALVLDDIDAQMFVASQIYEEAKHTQFF 110


>gi|145638051|ref|ZP_01793677.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
          influenzae PittHH]
 gi|145268754|gb|EDK08731.1| ribonucleotide-diphosphate reductase subunit beta [Haemophilus
          influenzae PittHH]
          Length = 73

 Score = 38.7 bits (89), Expect = 0.47,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 22/67 (32%), Gaps = 3/67 (4%)

Query: 15 KRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGL 74
          K   + +        +V +    KY    +      +  W P EV +  D   +     L
Sbjct: 10 KNDQLKEPMFFGQNVNVARYDQQKYETFEKLIEKQLSFFWRPEEVDVSQDRIDYA---AL 66

Query: 75 TDDERLM 81
           + E+ +
Sbjct: 67 PEHEKHI 73


>gi|260220050|emb|CBA27200.1| Ribonucleoside-diphosphate reductase subunit alpha [Curvibacter
            putative symbiont of Hydra magnipapillata]
          Length = 1306

 Score = 37.9 bits (87), Expect = 0.70,   Method: Composition-based stats.
 Identities = 6/26 (23%), Positives = 10/26 (38%)

Query: 169  LSSPSFHYWNKRRRSRILTRSLRFLC 194
            +  P+FH         +L   + F C
Sbjct: 1123 IMDPNFHTGTSESDQVLLKSLIVFAC 1148


>gi|148688625|gb|EDL20572.1| mCG1032193 [Mus musculus]
          Length = 150

 Score = 37.9 bits (87), Expect = 0.75,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 18/41 (43%), Gaps = 4/41 (9%)

Query: 152 VPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRF 192
           +P +  KA+WAL++     +     + +R  +      + F
Sbjct: 1   MPCVKKKADWALRWIGDKEA----AYGERVVAFAAVEGIFF 37


>gi|66394974|ref|YP_240948.1| ORF025 [Staphylococcus phage G1]
 gi|62636996|gb|AAX92107.1| ORF025 [Staphylococcus phage G1]
          Length = 265

 Score = 37.9 bits (87), Expect = 0.75,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 37/100 (37%), Gaps = 9/100 (9%)

Query: 99  NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELF---NMYREVPSI 155
           N+V         P+ +         E +H+ ++ +I T+L  ++   +       E   +
Sbjct: 2   NLVSYHEPR---PKYQAVFAFMGGMEEIHAKSYSHIFTTLLSNKETSYLLDTWVEENDFL 58

Query: 156 TAKANWALQYTQTLSSPS---FHYWNKRRRSRILTRSLRF 192
             KA +   Y   L  P+   F  +  +  S  L  +L +
Sbjct: 59  KVKAQFIGYYYDQLLKPNPTIFDRYMAKVASAFLESALFY 98


>gi|289626815|ref|ZP_06459769.1| hypothetical protein PsyrpaN_16994 [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289646516|ref|ZP_06477859.1| hypothetical protein Psyrpa2_02015 [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|298487769|ref|ZP_07005810.1| FF domain protein [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|298157861|gb|EFH98940.1| FF domain protein [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|330869032|gb|EGH03741.1| hypothetical protein PSYAE_17635 [Pseudomonas syringae pv. aesculi
           str. 0893_23]
          Length = 298

 Score = 37.5 bits (86), Expect = 0.88,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 36/83 (43%), Gaps = 4/83 (4%)

Query: 108 LSNPECRQYLLRQAFEEAVHSHT---FQYIITSLGLDEGELFNMYREVPSITAKANWALQ 164
           + +PE  + +     +EA+HS     +  +I + GL   ++   ++ +  IT K  W  +
Sbjct: 79  IEDPELIEKIDGLVAQEAIHSREHRRYNALIEAAGLPVDQIIRGWQTLYGITQK-RWVAR 137

Query: 165 YTQTLSSPSFHYWNKRRRSRILT 187
           + +  +     +      S++L 
Sbjct: 138 WFRLATVMMLEHHTAAASSKLLK 160


>gi|71737549|ref|YP_275476.1| hypothetical protein PSPPH_3317 [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71558102|gb|AAZ37313.1| conserved hypothetical protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 298

 Score = 37.5 bits (86), Expect = 0.90,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 36/83 (43%), Gaps = 4/83 (4%)

Query: 108 LSNPECRQYLLRQAFEEAVHSHT---FQYIITSLGLDEGELFNMYREVPSITAKANWALQ 164
           + +PE  + +     +EA+HS     +  +I + GL   ++   ++ +  IT K  W  +
Sbjct: 79  IEDPELIEKIDGLVAQEAIHSREHRRYNALIEAAGLPVDQIIRGWQTLYGITQK-RWVAR 137

Query: 165 YTQTLSSPSFHYWNKRRRSRILT 187
           + +  +     +      S++L 
Sbjct: 138 WFRLATVMMLEHHTAAASSKLLK 160


>gi|320323987|gb|EFW80071.1| hypothetical protein PsgB076_16942 [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320328123|gb|EFW84128.1| hypothetical protein PsgRace4_22183 [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 298

 Score = 37.5 bits (86), Expect = 0.90,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 36/83 (43%), Gaps = 4/83 (4%)

Query: 108 LSNPECRQYLLRQAFEEAVHSHT---FQYIITSLGLDEGELFNMYREVPSITAKANWALQ 164
           + +PE  + +     +EA+HS     +  +I + GL   ++   ++ +  IT K  W  +
Sbjct: 79  IEDPELIEKIDGLVAQEAIHSREHRRYNALIEAAGLPVDQIIRGWQTLYGITQK-RWVAR 137

Query: 165 YTQTLSSPSFHYWNKRRRSRILT 187
           + +  +     +      S++L 
Sbjct: 138 WFRLATVMMLEHHTAAASSKLLK 160


>gi|330876080|gb|EGH10229.1| hypothetical protein Pgy4_09373 [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 299

 Score = 37.5 bits (86), Expect = 0.98,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 36/83 (43%), Gaps = 4/83 (4%)

Query: 108 LSNPECRQYLLRQAFEEAVHSHT---FQYIITSLGLDEGELFNMYREVPSITAKANWALQ 164
           + +PE  + +     +EA+HS     +  +I + GL   ++   ++ +  IT K  W  +
Sbjct: 80  IEDPELIEKIDGLVAQEAIHSREHRRYNALIEAAGLPVDQIIRGWQTLYGITQK-RWVAR 138

Query: 165 YTQTLSSPSFHYWNKRRRSRILT 187
           + +  +     +      S++L 
Sbjct: 139 WFRLATVMMLEHHTAAASSKLLK 161


>gi|186684872|ref|YP_001868068.1| multi-sensor signal transduction histidine kinase [Nostoc
           punctiforme PCC 73102]
 gi|186467324|gb|ACC83125.1| multi-sensor signal transduction histidine kinase [Nostoc
           punctiforme PCC 73102]
          Length = 1102

 Score = 37.5 bits (86), Expect = 0.98,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 2/52 (3%)

Query: 16  RVNVDDKRMLNAR--SDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDL 65
           R  VD + +   +  SD  QL P +    W +   A    W   E+ +  D+
Sbjct: 357 RNEVDTETLWAGQYDSDQRQLYPRRSFEVWRESKKAQAQKWTVEEIELARDI 408


>gi|52550536|gb|AAU84385.1| transposase [uncultured archaeon GZfos9E5]
          Length = 398

 Score = 37.1 bits (85), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 25/76 (32%), Gaps = 8/76 (10%)

Query: 10  IQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWA--------WEKYLSACNNHWMPTEVPM 61
           I+ G + + +  + +   R+    L  L              E Y  A    W   +V +
Sbjct: 81  IENGTEVLRLRKRGVPAPRTVRYHLEKLVIDDILSQFNGISEELYRIAKKQRWFVNKVDL 140

Query: 62  QDDLALWKSKNGLTDD 77
             D+  W     + D+
Sbjct: 141 SIDIHDWMYYGDIDDE 156


>gi|213855388|ref|ZP_03383628.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
          enterica subsp. enterica serovar Typhi str. M223]
          Length = 108

 Score = 36.7 bits (84), Expect = 1.6,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 16/42 (38%), Gaps = 3/42 (7%)

Query: 38 KYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDER 79
          KY    +      +  W P EV +  D   ++    L + E+
Sbjct: 33 KYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQ---ALPEHEK 71


>gi|227902816|ref|ZP_04020621.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           acidophilus ATCC 4796]
 gi|227869479|gb|EEJ76900.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           acidophilus ATCC 4796]
          Length = 326

 Score = 36.7 bits (84), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 5/107 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P  VP+++D    K    L    R  +       + S  L   + +  I      PE 
Sbjct: 31  WEPRHVPVKEDK---KEFLQLPSPVRCTLLHVFSALSFSSGLQMKSGIEQIKVDAITPEE 87

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAK 158
              L    + E++ + ++ Y++  L   E     F+     P +  K
Sbjct: 88  AAVLNALQYLESIANKSYSYVLRELATPEEVDNAFDWANNSPYLQKK 134


>gi|58338007|ref|YP_194592.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           acidophilus NCFM]
 gi|58255324|gb|AAV43561.1| ribonucleotide reductase [Lactobacillus acidophilus NCFM]
          Length = 311

 Score = 36.7 bits (84), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 5/107 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P  VP+++D    K    L    R  +       + S  L   + +  I      PE 
Sbjct: 31  WEPRHVPVKEDK---KEFLQLPSPVRCTLLHVFSALSFSSGLQMKSGIEQIKVDAITPEE 87

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDE--GELFNMYREVPSITAK 158
              L    + E++ + ++ Y++  L   E     F+     P +  K
Sbjct: 88  AAVLNALQYLESIANKSYSYVLRELATPEEVDNAFDWANNSPYLQKK 134


>gi|330861133|emb|CBX71396.1| ribonucleoside-diphosphate reductase 2 subunit beta [Yersinia
           enterocolitica W22703]
          Length = 239

 Score = 36.7 bits (84), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 2/60 (3%)

Query: 111 PECRQYLLRQAFEEAVHSHTFQYIITSLGL--DEGELFNMYREVPSITAKANWALQYTQT 168
           P         +F EAVH+ ++  I ++L +  D  E +    E   +  KA+  LQ+   
Sbjct: 5   PHEEAVFSNISFMEAVHARSYSSIFSTLCMTSDVDEAYRWSEENGPLQKKADIILQHYNN 64


>gi|198420723|ref|XP_002119538.1| PREDICTED: similar to RFT1 homolog [Ciona intestinalis]
          Length = 556

 Score = 36.4 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 21/53 (39%), Gaps = 2/53 (3%)

Query: 71  KNGLTDDERLM--IKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQA 121
           K  LT+ ER +  I   L F       V NN+   + R +  P    + L  A
Sbjct: 271 KQILTEGERYVMTILNVLSFADQGVYDVINNLGSLVARFIFLPIEESFYLFFA 323


>gi|42519734|ref|NP_965664.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           johnsonii NCC 533]
 gi|41584023|gb|AAS09630.1| hypothetical protein LJ_0591 [Lactobacillus johnsonii NCC 533]
          Length = 313

 Score = 36.4 bits (83), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 19/127 (14%)

Query: 51  NNHW-MPTE-VPMQD-----DL----------ALWKSKNGLTDDERLMIKRNLGFFASSE 93
            N+W    E V         D+             K    L  +E+ +I  + G    S 
Sbjct: 9   ANNWNTVEEQVDRSAWARLNDIVYEPRRVPIYKDQKEFLHLPKNEQTVILHSFGSLTLSS 68

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYRE 151
           +L     +  I +   N E         + E++++  + Y++        + + +    +
Sbjct: 69  TLQMKVALSEIKKDAENSEEVAVYNALQYLESINNKAYSYVLAEFSDSKKQEDAYEWANQ 128

Query: 152 VPSITAK 158
            P +  K
Sbjct: 129 NPYLQKK 135


>gi|330718348|ref|ZP_08312948.1| ribonucleoside-diphosphate reductase beta subunit [Leuconostoc
          fallax KCTC 3537]
          Length = 94

 Score = 36.4 bits (83), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 3/53 (5%)

Query: 46 YLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN 98
          +     N W+ T VP+ +D   W+    L  DE   + ++L   A+ ES  + 
Sbjct: 24 WQQMVANFWLDTRVPVIEDKTGWE---ALAQDEHDALAQSLADLATLESFQSE 73


>gi|313125821|ref|YP_004036091.1| hypothetical protein Hbor_10540 [Halogeometricum borinquense DSM
           11551]
 gi|312292186|gb|ADQ66646.1| hypothetical protein Hbor_10540 [Halogeometricum borinquense DSM
           11551]
          Length = 297

 Score = 36.4 bits (83), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 39/94 (41%), Gaps = 10/94 (10%)

Query: 42  AWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN---LGFFASSESLVAN 98
           A   +  A   HW P E+ +  D      +  ++D  R    +    +  F + E  V  
Sbjct: 24  AERYFRHATERHWSPYEIDLAAD------RAAISDLGRSAFTQLRATIAMFGAGEENVTE 77

Query: 99  NIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQ 132
           ++V  +    +N   ++++    +EEA H+  F+
Sbjct: 78  DLV-PLAATTTNKTDQRFVASHIYEEAKHAAFFE 110


>gi|284167352|ref|YP_003405630.1| ribonucleotide reductase [Haloterrigena turkmenica DSM 5511]
 gi|284017007|gb|ADB62957.1| ribonucleotide reductase [Haloterrigena turkmenica DSM 5511]
          Length = 296

 Score = 36.4 bits (83), Expect = 2.1,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 59/177 (33%), Gaps = 24/177 (13%)

Query: 12  AGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSK 71
           + E  V+  +   LN          ++Y             HW P  + ++ D    ++ 
Sbjct: 10  SEESPVSPLESSGLNEHPKRLVRSAIEY-------------HWDPAAIDVRADQ---EAV 53

Query: 72  NGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
           + L+  E   ++  L  F + E  V  ++   +   L   + ++Y+  Q ++EA H+  F
Sbjct: 54  SELSRVEFTRLRGLLAQFGAGERAVTTDLA-PLAVVLDGSDEQRYIATQLYDEARHTELF 112

Query: 132 QYIITSLGLDEGELFNMYREVPSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTR 188
                 +   E E   +    P        A +++       F   +      +   
Sbjct: 113 DRYWKRVIRPEEESRGLIPTEP-------MADRWSHDDYRELFDRTSNAMARLLERD 162


>gi|329667981|gb|AEB93929.1| ribonucleoside-diphosphate reductase beta chain [Lactobacillus
           johnsonii DPC 6026]
          Length = 313

 Score = 36.4 bits (83), Expect = 2.1,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 19/127 (14%)

Query: 51  NNHW-MPTE-VPMQD-----DL----------ALWKSKNGLTDDERLMIKRNLGFFASSE 93
            N+W    E V         D+             K    L  +E+ +I  + G    S 
Sbjct: 9   ANNWNTVEEQVDRSAWARLNDIVYEPRRVPIYKDQKEFLHLPKNEQTVILHSFGSLTLSS 68

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYRE 151
           +L     +  I +   N E         + E++++  + Y++        + + +    +
Sbjct: 69  TLQMKVALSEIKKDAENSEEVAVYNALQYLESINNKAYSYVLAEFSDSKKQEDAYEWANQ 128

Query: 152 VPSITAK 158
            P +  K
Sbjct: 129 NPYLQKK 135


>gi|213023521|ref|ZP_03337968.1| ribonucleotide-diphosphate reductase subunit beta [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 256

 Score = 36.4 bits (83), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 28/76 (36%), Gaps = 2/76 (2%)

Query: 90  ASSESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFN 147
              +++       ++      P     L   +F EAVH+ ++  I ++L    +    + 
Sbjct: 1   TLLDTIQNIAGAPSLMADAITPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKEVDAAYA 60

Query: 148 MYREVPSITAKANWAL 163
              E P +  KA   L
Sbjct: 61  WSEENPPLQRKAQIIL 76


>gi|322419393|ref|YP_004198616.1| peptidase S10 serine carboxypeptidase [Geobacter sp. M18]
 gi|320125780|gb|ADW13340.1| peptidase S10 serine carboxypeptidase [Geobacter sp. M18]
          Length = 510

 Score = 36.4 bits (83), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 26/75 (34%), Gaps = 10/75 (13%)

Query: 46  YLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFA--SSESLVANNIVLA 103
           +  A    W  +E  +  D         LTD ER ++   L  F   S + +   N+ + 
Sbjct: 284 WTLAQAEQWAGSEYQLALDKGD-----RLTDAERKIVAEKLASFTGLSVDFIQNRNLRIE 338

Query: 104 ---IYRHLSNPECRQ 115
                R L   E R 
Sbjct: 339 NRDFARELLRAEGRM 353


>gi|157105736|ref|XP_001649004.1| phosphatidylinositol 4-kinase type-ii [Aedes aegypti]
 gi|108880035|gb|EAT44260.1| phosphatidylinositol 4-kinase type-ii [Aedes aegypti]
          Length = 556

 Score = 35.6 bits (81), Expect = 3.2,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 12/68 (17%)

Query: 1   MANNTGLSPIQAGEKRVNVDDKRMLNARSDVNQLLPLKYGWAWEKYLSACNNHWMPT-EV 59
           M  NT  + +Q  E R+   D  +           P K+  +W  Y       W+P  ++
Sbjct: 403 MTENTDWNLVQLPEIRIAAIDNGLA---------FPFKHPDSWRAYPYHWA--WLPQAKI 451

Query: 60  PMQDDLAL 67
           P   D+  
Sbjct: 452 PFSQDIKD 459


>gi|227889328|ref|ZP_04007133.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           johnsonii ATCC 33200]
 gi|227850130|gb|EEJ60216.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           johnsonii ATCC 33200]
          Length = 313

 Score = 35.6 bits (81), Expect = 3.7,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 19/127 (14%)

Query: 51  NNHW-MPTE-VPMQD-----DL----------ALWKSKNGLTDDERLMIKRNLGFFASSE 93
            N+W    E V         D+             K    L  +E+ +I  + G    S 
Sbjct: 9   ANNWNTVEEQVDRSAWARLNDIVYEPCRVPIYKDQKEFLHLPRNEQTVILHSFGSLTLSS 68

Query: 94  SLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSL--GLDEGELFNMYRE 151
           +L     +  I +   N E         + E++++  + Y++        + + +    +
Sbjct: 69  TLQMKVALSEIKKDAENSEEVAVYNALQYLESINNKAYSYVLAEFSDSKKQEDAYEWANQ 128

Query: 152 VPSITAK 158
            P +  K
Sbjct: 129 NPYLQKK 135


>gi|238853136|ref|ZP_04643525.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           gasseri 202-4]
 gi|238834244|gb|EEQ26492.1| ribonucleoside-diphosphate reductase, beta subunit [Lactobacillus
           gasseri 202-4]
          Length = 330

 Score = 35.6 bits (81), Expect = 3.8,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 41/106 (38%), Gaps = 6/106 (5%)

Query: 56  PTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQ 115
           P  VP+  D   +   + L   E+ M+  + G  A S +L     +  I +   N E   
Sbjct: 34  PRRVPIHKDRDEF---SHLPKAEQTMLLHSFGSLALSSTLQMKVSLSKIKQDAENSEEAA 90

Query: 116 YLLRQAFEEAVHSHTFQYII---TSLGLDEGELFNMYREVPSITAK 158
                 + E++++  + + +   ++      E FN   + P +  K
Sbjct: 91  VYNALQYLESINNKAYGHALSEFSTSDEQRDEAFNWANQNPYLQKK 136


>gi|300362937|ref|ZP_07059107.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           gasseri JV-V03]
 gi|300352987|gb|EFJ68865.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           gasseri JV-V03]
          Length = 314

 Score = 35.6 bits (81), Expect = 4.0,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 41/106 (38%), Gaps = 6/106 (5%)

Query: 56  PTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQ 115
           P  VP+  D   +   + L   E+ M+  + G  A S +L     +  I +   N E   
Sbjct: 34  PRRVPIHKDRDEF---SHLPKAEQTMLLHSFGSLALSSTLQMKVSLSKIKQDAENSEEAA 90

Query: 116 YLLRQAFEEAVHSHTFQYII---TSLGLDEGELFNMYREVPSITAK 158
                 + E++++  + + +   ++      E FN   + P +  K
Sbjct: 91  VYNALQYLESINNKAYGHALSEFSTSDEQRDEAFNWANQNPYLQKK 136


>gi|167746723|ref|ZP_02418850.1| hypothetical protein ANACAC_01434 [Anaerostipes caccae DSM 14662]
 gi|167653683|gb|EDR97812.1| hypothetical protein ANACAC_01434 [Anaerostipes caccae DSM 14662]
          Length = 242

 Score = 35.6 bits (81), Expect = 4.0,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 3/66 (4%)

Query: 67  LWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLS---NPECRQYLLRQAFE 123
            +  +  LTD ER +I  ++  F   E     +++  +  ++     PE R+ +L    E
Sbjct: 32  DFSKELPLTDSERRLITPSVRAFQKGEGSDGRHLMNTVEAYIHQHGAPEYREAMLWFIKE 91

Query: 124 EAVHSH 129
           E  HS 
Sbjct: 92  ENWHSA 97


>gi|83765032|dbj|BAE55175.1| unnamed protein product [Aspergillus oryzae]
          Length = 473

 Score = 35.2 bits (80), Expect = 4.3,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 34/96 (35%), Gaps = 14/96 (14%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
             KY   W     +  N W P E PM   + L  ++N L  DE       +G F      
Sbjct: 26  NFKYRDVWGPREKSMANPWSP-ETPMGRSIILRLAENSLLHDE-------MGQFIK---E 74

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAF---EEAVHS 128
             N + L+   + + P     L R A     E  HS
Sbjct: 75  QINVLPLSHLTYSTGPRGSCRLRRAAAAFLNEEFHS 110


>gi|76803161|ref|YP_331256.1| ribonucleoside-diphosphate reductase, beta subunit 2 [Natronomonas
           pharaonis DSM 2160]
 gi|76559026|emb|CAI50624.1| probable ribonucleoside-diphosphate reductase, beta subunit 2
           [Natronomonas pharaonis DSM 2160]
          Length = 306

 Score = 35.2 bits (80), Expect = 5.0,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 4/90 (4%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRN---LGFFASSESLVANNIV 101
            Y +A   HW P ++ +  D    K+    TD     +      +  F + E  V  ++ 
Sbjct: 20  YYRNAVERHWDPHDIELDTDRENLKAFLDSTDTPETYLDGLRSGVARFGAGEQAVTEDLA 79

Query: 102 LAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
             +   L + + + ++  Q +EEA H+  F
Sbjct: 80  -PLATALGSIDDQMFVTTQIYEEAKHTDFF 108


>gi|195451115|ref|XP_002072774.1| GK13780 [Drosophila willistoni]
 gi|194168859|gb|EDW83760.1| GK13780 [Drosophila willistoni]
          Length = 838

 Score = 35.2 bits (80), Expect = 5.3,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 4/43 (9%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPT-EVPMQDDLALWKSKNGLTD 76
            P K+  +W  Y       W+P  +VP  +D+        L+D
Sbjct: 713 FPFKHPDSWRAYPYHWA--WLPQAKVPFSEDIKD-HVLPQLSD 752


>gi|195391948|ref|XP_002054621.1| GJ22707 [Drosophila virilis]
 gi|194152707|gb|EDW68141.1| GJ22707 [Drosophila virilis]
          Length = 857

 Score = 35.2 bits (80), Expect = 5.3,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 4/43 (9%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPT-EVPMQDDLALWKSKNGLTD 76
            P K+  +W  Y       W+P  +VP  DD+   +    L+D
Sbjct: 732 FPFKHPDSWRAYPYHWA--WLPQAKVPFSDDIKD-QVLPQLSD 771


>gi|195062926|ref|XP_001996279.1| GH22280 [Drosophila grimshawi]
 gi|193899774|gb|EDV98640.1| GH22280 [Drosophila grimshawi]
          Length = 756

 Score = 35.2 bits (80), Expect = 5.3,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 4/43 (9%)

Query: 35  LPLKYGWAWEKYLSACNNHWMPT-EVPMQDDLALWKSKNGLTD 76
            P K+  +W  Y       W+P  +VP  DD+   +    L+D
Sbjct: 631 FPFKHPDSWRAYPYHWA--WLPQAKVPFSDDIKD-QVLPQLSD 670


>gi|260662380|ref|ZP_05863275.1| ribonucleoside-diphosphate reductase beta subunit [Lactobacillus
           fermentum 28-3-CHN]
 gi|260553071|gb|EEX26014.1| ribonucleoside-diphosphate reductase beta subunit [Lactobacillus
           fermentum 28-3-CHN]
          Length = 306

 Score = 34.8 bits (79), Expect = 6.2,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 39/109 (35%), Gaps = 8/109 (7%)

Query: 46  YLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN--NIVLA 103
           +L   NN W+ T VP+ DD   W     LT  ++  +   L   A   +  +      L 
Sbjct: 23  WLKLTNNFWLDTRVPITDDQPSWH---ALTAQQQAQVGHALAGRALLSAFQSELGAPSLR 79

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDE-GELFNMYRE 151
             R     E    L+   F E+VH+     I   L  +E    +  +  
Sbjct: 80  AGRRTQQEEAVLNLI--TFMESVHTKAVTTIFRRLTDEETTAAYYAWAN 126


>gi|289580515|ref|YP_003478981.1| ribonucleoside-diphosphate reductase subunit beta 2 [Natrialba
           magadii ATCC 43099]
 gi|289530068|gb|ADD04419.1| ribonucleoside-diphosphate reductase, beta subunit 2 [Natrialba
           magadii ATCC 43099]
          Length = 310

 Score = 34.8 bits (79), Expect = 6.3,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 5/91 (5%)

Query: 45  KYLSACNNHWMPTEVPMQDDLALWKSKNGLTDD-ERLMIKRNL---GFFASSESLVANNI 100
            Y +A   HW P E+ ++ D+    +    +D+ ++    R L     F + E  V  ++
Sbjct: 20  YYRNAVERHWDPGEIELEQDVENLLAHIEASDEYDQSYWDRTLNGIAKFGAGEDAVTEDL 79

Query: 101 VLAIYRHLSNPECRQYLLRQAFEEAVHSHTF 131
              +   L N + + +L  Q +EEA H+  F
Sbjct: 80  A-PLATVLDNIDDQLFLTTQLYEEAKHADFF 109


>gi|299783626|gb|ADJ41624.1| Ribonucleoside-diphosphate reductase beta subunit [Lactobacillus
           fermentum CECT 5716]
          Length = 306

 Score = 34.8 bits (79), Expect = 6.7,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 33/87 (37%), Gaps = 7/87 (8%)

Query: 46  YLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN--NIVLA 103
           +L   NN W+ T VP+ DD   W     LT  ++  +   L   A   +  +      L 
Sbjct: 23  WLKLTNNFWLDTRVPITDDQPSWH---ALTAQQQAQVGHALAGRALLSAFQSELGAPSLR 79

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHT 130
             R     E    L+   F E+VH+  
Sbjct: 80  AGRRTQQEEAVLNLI--TFMESVHTKA 104


>gi|184156149|ref|YP_001844489.1| ribonucleoside-diphosphate reductase beta subunit [Lactobacillus
           fermentum IFO 3956]
 gi|183227493|dbj|BAG28009.1| ribonucleoside-diphosphate reductase beta subunit [Lactobacillus
           fermentum IFO 3956]
          Length = 306

 Score = 34.8 bits (79), Expect = 6.8,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 33/87 (37%), Gaps = 7/87 (8%)

Query: 46  YLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN--NIVLA 103
           +L   NN W+ T VP+ DD   W     LT  ++  +   L   A   +  +      L 
Sbjct: 23  WLKLTNNFWLDTRVPITDDQPSWH---ALTAQQQAQVGHALAGRALLSAFQSELGAPSLR 79

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHT 130
             R     E    L+   F E+VH+  
Sbjct: 80  AGRRTQQEEAVLNLI--TFMESVHTKA 104


>gi|227515316|ref|ZP_03945365.1| ribonucleoside-diphosphate reductase, subunit beta [Lactobacillus
           fermentum ATCC 14931]
 gi|227086330|gb|EEI21642.1| ribonucleoside-diphosphate reductase, subunit beta [Lactobacillus
           fermentum ATCC 14931]
          Length = 306

 Score = 34.8 bits (79), Expect = 7.0,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 33/87 (37%), Gaps = 7/87 (8%)

Query: 46  YLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVAN--NIVLA 103
           +L   NN W+ T VP+ DD   W     LT  ++  +   L   A   +  +      L 
Sbjct: 23  WLKLTNNFWLDTRVPITDDQPSWH---ALTAQQQAQVGHALAGRALLSAFQSELGAPSLR 79

Query: 104 IYRHLSNPECRQYLLRQAFEEAVHSHT 130
             R     E    L+   F E+VH+  
Sbjct: 80  AGRRTQQEEAVLNLI--TFMESVHTKA 104


>gi|294138851|ref|YP_003554829.1| lysophospholipase L2 [Shewanella violacea DSS12]
 gi|293325320|dbj|BAJ00051.1| lysophospholipase L2 [Shewanella violacea DSS12]
          Length = 322

 Score = 34.4 bits (78), Expect = 8.2,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 19/78 (24%)

Query: 52  NHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIY-----R 106
           NHW+   + +            L +  R      L   A  +++V +N+          +
Sbjct: 238 NHWLVESIDVG---------PKLVEAARHSTTSILILQAEMDTVV-DNLAQNHAVGGQCQ 287

Query: 107 HLSNPECRQYLLRQAFEE 124
            +  P  R     + F E
Sbjct: 288 LVKIPNAR----HEIFME 301


>gi|317138971|ref|XP_001817177.2| hypothetical protein AOR_1_104174 [Aspergillus oryzae RIB40]
          Length = 427

 Score = 34.4 bits (78), Expect = 8.3,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 34/96 (35%), Gaps = 14/96 (14%)

Query: 36  PLKYGWAWEKYLSACNNHWMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESL 95
             KY   W     +  N W P E PM   + L  ++N L  DE       +G F      
Sbjct: 26  NFKYRDVWGPREKSMANPWSP-ETPMGRSIILRLAENSLLHDE-------MGQFIK---E 74

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAF---EEAVHS 128
             N + L+   + + P     L R A     E  HS
Sbjct: 75  QINVLPLSHLTYSTGPRGSCRLRRAAAAFLNEEFHS 110


>gi|162454691|ref|YP_001617058.1| hypothetical protein sce6411 [Sorangium cellulosum 'So ce 56']
 gi|161165273|emb|CAN96578.1| hypothetical protein sce6411 [Sorangium cellulosum 'So ce 56']
          Length = 399

 Score = 34.4 bits (78), Expect = 8.5,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 15/41 (36%)

Query: 96  VANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIIT 136
             +N  + +    ++P  R      A  E  H   ++ II 
Sbjct: 203 QTHNYYVNVGPFFTDPVARLLYAEIASIEEQHVTQYEAIID 243


>gi|315427780|dbj|BAJ49374.1| conserved hypothetical protein [Candidatus Caldiarchaeum
           subterraneum]
          Length = 342

 Score = 34.4 bits (78), Expect = 8.6,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 37/91 (40%), Gaps = 11/91 (12%)

Query: 69  KSKNGLTDDERLMIKRNLGFFASSESL--VANNIVLAIYRHLSNPECRQY-----LLRQA 121
           ++ +G T +ER  ++R       ++ +    N +V      L   E   +     ++R A
Sbjct: 90  RADDGFTPEERRELRRIASELVGADIMEDAQNRMVFRFLTKLD--EENFFDRLTRMMRFA 147

Query: 122 FEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
           +E  +H  T+Q +      +  E+     EV
Sbjct: 148 YE--IHRDTYQILRERNISNAAEIVERIGEV 176


>gi|147906731|ref|NP_001087751.1| cytoglobin [Xenopus laevis]
 gi|51703934|gb|AAH81170.1| MGC84306 protein [Xenopus laevis]
 gi|62176946|emb|CAG25615.1| cytoglobin [Xenopus laevis]
          Length = 179

 Score = 34.4 bits (78), Expect = 8.6,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 32/68 (47%), Gaps = 2/68 (2%)

Query: 57  TEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQY 116
            +V  ++D+  W+    +T+ ER +IK       ++   V  +I++  +  ++ P  +Q+
Sbjct: 2   EKVQGENDMERWERLEEITESERGVIKETWARVYANCEDVGVSILIRFF--VNFPSAKQH 59

Query: 117 LLRQAFEE 124
             +    E
Sbjct: 60  FSQFKHME 67


>gi|227894062|ref|ZP_04011867.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           ultunensis DSM 16047]
 gi|227864144|gb|EEJ71565.1| ribonucleotide-diphosphate reductase subunit beta [Lactobacillus
           ultunensis DSM 16047]
          Length = 269

 Score = 34.4 bits (78), Expect = 8.8,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 47/117 (40%), Gaps = 5/117 (4%)

Query: 54  WMPTEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPEC 113
           W P  VP+++D    K    L   ++  + R  G  A +  L     +  I +    PE 
Sbjct: 31  WEPRHVPVKEDQ---KEFLKLDKPKQTAVLRAFGSLALASGLQMRIGLDQIKQDAITPEE 87

Query: 114 RQYLLRQAFEEAVHSHTFQYIITSLGLDEG--ELFNMYREVPSITAKANWALQYTQT 168
              L    + E++ +  + Y+I  LG+D+   E F+       +  K +   +  Q+
Sbjct: 88  SAVLNALQYLESIANKGYSYVIHELGIDDDVQETFDWANNNYYLQRKIHILNKIYQS 144


>gi|227431036|ref|ZP_03913097.1| HesA/MoeB/ThiF family protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227353228|gb|EEJ43393.1| HesA/MoeB/ThiF family protein [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 344

 Score = 34.0 bits (77), Expect = 9.8,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 28/101 (27%), Gaps = 11/101 (10%)

Query: 93  ESLVANNIVLAIYRHLSNPECRQYLLRQAFEEAVHSHTFQYIITSLGLDEGELFNMYREV 152
           + +        I R +   E  ++       +   S +F+ +     L E EL +M   +
Sbjct: 11  DGIRVGGYQANITREIYVDEVEKFYSLMTDMDG--SQSFEKLKEKYNLTEMELLSMIESL 68

Query: 153 PSITAKANWALQYTQTLSSPSFHYWNKRRRSRILTRSLRFL 193
                            + PS + +    +         F 
Sbjct: 69  K---------NSGILYKNDPSEYSFTDEEKKIYSRNLNFFA 100


>gi|55742013|ref|NP_001006870.1| cytoglobin [Xenopus (Silurana) tropicalis]
 gi|49903543|gb|AAH76983.1| cytoglobin [Xenopus (Silurana) tropicalis]
          Length = 179

 Score = 34.0 bits (77), Expect = 9.8,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 32/68 (47%), Gaps = 2/68 (2%)

Query: 57  TEVPMQDDLALWKSKNGLTDDERLMIKRNLGFFASSESLVANNIVLAIYRHLSNPECRQY 116
            +V  ++D+  W+    +T+ ER +IK       ++   V  +I++  +  ++ P  +Q+
Sbjct: 2   EKVQGENDMERWERLEEITESERGVIKETWARVYANCEDVGVSILIRFF--VNFPSAKQH 59

Query: 117 LLRQAFEE 124
             +    E
Sbjct: 60  FSQFKHME 67


  Database: nr
    Posted date:  May 13, 2011  4:10 AM
  Number of letters in database: 999,999,932
  Number of sequences in database:  2,987,209
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 13, 2011  4:17 AM
  Number of letters in database: 999,998,956
  Number of sequences in database:  2,896,973
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 13, 2011  4:23 AM
  Number of letters in database: 999,999,979
  Number of sequences in database:  2,907,862
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 13, 2011  4:29 AM
  Number of letters in database: 999,999,513
  Number of sequences in database:  2,932,190
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 13, 2011  4:33 AM
  Number of letters in database: 792,586,372
  Number of sequences in database:  2,260,650
  
Lambda     K      H
   0.314    0.156    0.491 

Lambda     K      H
   0.267   0.0478    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,212,138,080
Number of Sequences: 13984884
Number of extensions: 199451044
Number of successful extensions: 390539
Number of sequences better than 10.0: 2646
Number of HSP's better than 10.0 without gapping: 3517
Number of HSP's successfully gapped in prelim test: 1124
Number of HSP's that attempted gapping in prelim test: 381560
Number of HSP's gapped (non-prelim): 4812
length of query: 196
length of database: 4,792,584,752
effective HSP length: 132
effective length of query: 64
effective length of database: 2,946,580,064
effective search space: 188581124096
effective search space used: 188581124096
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 78 (34.4 bits)