Query         537021.9.peg.75_1
Match_columns 136
No_of_seqs    102 out of 1392
Neff          7.1 
Searched_HMMs 23785
Date          Mon May 23 12:02:00 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i peg_75.hhm -d /home/congqian_1/database/pdb/pdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 1syy_A Ribonucleoside-diphosph 100.0 1.6E-39 6.9E-44  278.6  12.1  134    1-135   213-346 (346)
  2 2rcc_A Ribonucleoside-diphosph 100.0 1.6E-37 6.8E-42  265.5  12.2  136    1-136   206-344 (346)
  3 1mxr_A Ribonucleotide reductas 100.0 3.4E-36 1.4E-40  256.8  11.8  132    1-132   224-361 (375)
  4 1h0o_A Ribonucleoside-diphosph 100.0 1.3E-35 5.4E-40  253.0  10.2  125    1-134   253-377 (390)
  5 3n37_A Ribonucleoside-diphosph 100.0 1.5E-34 6.1E-39  246.1  12.6  131    1-134   178-311 (319)
  6 1jk0_A RNR Y2, ribonucleoside- 100.0 1.4E-34 5.9E-39  246.2  10.0  124    1-133   279-402 (419)
  7 2p1i_A Ribonucleotide reductas 100.0 3.1E-34 1.3E-38  243.9  10.9  124    1-133   212-335 (349)
  8 3dhz_A Ribonucleotide reductas 100.0 3.9E-33 1.6E-37  236.7  11.4  129    1-132   188-319 (329)
  9 1jk0_B RNR Y4, ribonucleoside- 100.0 5.5E-33 2.3E-37  235.8   7.8  125    1-134   206-330 (345)
 10 2o1z_A Ribonucleotide reductas  99.9 2.2E-27 9.4E-32  199.0   8.4  100    1-108   211-310 (311)
 11 3mjo_A Ribonucleotide reductas  99.9 7.3E-26   3E-30  189.1  12.2  109    1-112   187-296 (296)
 12 3ee4_A Probable ribonucleoside  99.8 8.7E-20 3.7E-24  149.2   8.1  121    1-127   197-318 (323)
 13 2uw1_A Desaturase, plastid del  89.4    0.42 1.8E-05   26.6   4.5   35    2-36    191-225 (338)
 14 1za0_A Possible acyl-[acyl-car  89.2    0.72   3E-05   25.1   5.6   33    2-34    176-208 (275)
 15 2oc5_A Hypothetical protein; N  88.8     1.3 5.6E-05   23.3   9.4   82    5-95    148-231 (244)
 16 2inc_A Toluene, O-xylene monoo  77.7     3.8 0.00016   20.3   9.3   90    2-96    217-313 (491)
 17 3ge3_A Toluene-4-monooxygenase  62.3     8.2 0.00034   18.2   7.9   88    4-96    220-314 (500)
 18 3hl1_A Ferritin like protein;   57.6     9.8 0.00041   17.6   3.9   27    4-30     43-69  (317)
 19 2fzf_A Hypothetical protein; s  52.0      12 0.00051   17.1   7.0   82    2-84     49-144 (175)
 20 1nfv_A Bacterioferritin; 24 su  50.5      13 0.00053   16.9   3.6   62    1-63     42-106 (179)
 21 3e2c_A Bacterioferritin; DIIRO  49.4      13 0.00055   16.8   3.6   15    1-15      1-15  (158)
 22 3ez0_A Uncharacterized protein  47.7      14 0.00059   16.6   5.4   90    3-94    126-224 (225)
 23 1mty_D Methane monooxygenase h  45.1      15 0.00065   16.4   6.9   90    3-96    217-315 (512)
 24 3gvy_A Bacterioferritin; iron   44.4      16 0.00066   16.3   3.2   14    1-14      1-14  (161)
 25 3chh_A P-aminobenzoate N-oxyge  41.5      17 0.00073   16.0   4.8   29    6-34    218-246 (336)
 26 1yuz_A Nigerythrin; rubrythrin  40.1      18 0.00077   15.9   4.0   30    1-30     59-88  (202)
 27 1lko_A Rubrerythrin all-iron(I  35.9      21 0.00089   15.4   3.6   28    1-28     39-66  (191)
 28 1o9i_A Pseudocatalase; oxidore  34.1      23 0.00095   15.3   3.3   29    4-32     55-83  (266)
 29 2wtl_A Bacterioferritin, BFR;   33.3      23 0.00098   15.2   3.6   27    3-29     43-69  (173)
 30 2kp7_A Crossover junction endo  32.1      14 0.00057   16.7   1.2   38   91-131     5-44  (87)
 31 2inp_C Phenol hydroxylase comp  30.9      25  0.0011   14.9  10.8   84    4-96    243-326 (328)
 32 1nnq_A Rubrerythrin; structura  28.0      29  0.0012   14.6   5.3   29    1-29     38-66  (171)
 33 3fvb_A Bacterioferritin; niaid  25.7      31  0.0013   14.3   4.6   59    2-61     59-120 (182)
 34 1vjx_A Putative ferritin-like   25.6      31  0.0013   14.3   4.8   84    2-86     42-141 (157)
 35 2qqy_A Sigma B operon; dodecam  25.2      32  0.0013   14.3   4.4   59    2-61     42-102 (149)
 36 1jgc_A Bacterioferritin, BFR;   23.2      35  0.0015   14.0   3.6   14    1-14      1-14  (161)
 37 2v8t_A Manganese-containing ps  20.7      39  0.0016   13.7   3.5   30    5-34     60-89  (302)

No 1  
>1syy_A Ribonucleoside-diphosphate reductase beta chain; DIIRON, oxygen activation, iron coupled radical, immune evasion, replication; 1.70A {Chlamydia trachomatis} SCOP: a.25.1.2 PDB: 2ani_A
Probab=100.00  E-value=1.6e-39  Score=278.57  Aligned_cols=134  Identities=59%  Similarity=1.056  Sum_probs=130.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             96525578998987699999999999984222423302433799988789999999999887469872387989999999
Q 537021.9.peg.7    1 MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYM   80 (136)
Q Consensus         1 M~G~~~~i~~I~RDE~lH~~~~~~l~~~l~~e~p~~~~~~~~~~i~~~~~eave~E~~~~~~~~~~~~~Gl~~~~~~~Yi   80 (136)
                      |+|+|++|+||+|||++|+.|++.|++++++|+|+++++++++++++++.+||++|++|++++|+.+++|||++++++||
T Consensus       213 m~g~~~~i~~I~RDE~~H~~~~~~l~~~l~~e~~~~~~~~~~~~i~~l~~~ave~E~~~~~~~~~~~~~Gl~~~~~~~Yv  292 (346)
T 1syy_A          213 MIGIGEQYQYILRDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDLEIEYAQDCLPRGILGLRASMFIDYV  292 (346)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCBTTBCHHHHHHHH
T ss_pred             CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
T ss_conf             85449987786145788999999999999851978756899999999999999999999998565887899999999999


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCC
Q ss_conf             9999999997697867898788867999972366784767321222244302668
Q 537021.9.peg.7   81 QFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAGLKW  135 (136)
Q Consensus        81 ~y~an~rL~~lGl~~~f~~~~nP~~W~~~~~~~~~~~nFFE~r~~~Y~k~~~~~~  135 (136)
                      +|+||+||.+||++|+|+. +||+|||++.+++++++||||+|||+|+|||++.|
T Consensus       293 ~y~an~rL~~lG~~~~f~~-~nP~~w~~~~~~~~~~~nFFe~r~~~Y~k~~~~~~  346 (346)
T 1syy_A          293 QHIADRRLERIGLKPIYHT-KNPFPWMSETIDLNKEKNFFETRVIEYQHAASLTW  346 (346)
T ss_dssp             HHHHHHHHHHTTCCCSSCC-CCSCTTC----------------------------
T ss_pred             HHHHHHHHHHCCCCCCCCC-CCCHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCC
T ss_conf             9999999997799998999-99637899863867776878897210454577889


No 2  
>2rcc_A Ribonucleoside-diphosphate reductase subunit beta; NP_241368.1, putative class I ribonucleotide reductase, ribonucleotide reductase; HET: MSE PGE PG4; 1.90A {Bacillus halodurans c-125}
Probab=100.00  E-value=1.6e-37  Score=265.50  Aligned_cols=136  Identities=29%  Similarity=0.505  Sum_probs=127.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             96525578998987699999999999984222423302433799988789999999999887469872387989999999
Q 537021.9.peg.7    1 MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYM   80 (136)
Q Consensus         1 M~G~~~~i~~I~RDE~lH~~~~~~l~~~l~~e~p~~~~~~~~~~i~~~~~eave~E~~~~~~~~~~~~~Gl~~~~~~~Yi   80 (136)
                      |+|++++|+||+|||++|+.|++.|++++++++|+++++++++.+++++++||++|++|++++|+.+++|||++++++||
T Consensus       206 m~g~~~~i~~I~RDE~lH~~~~~~l~~~l~~e~~~~~~~~~~~~i~~~~~eave~E~~~~~~~~~~~~~Gl~~e~~~~yi  285 (346)
T 2rcc_A          206 MVSTSTMINYINRDEQLHVYLFTNIFKELLVEFPELNTEETKTFVKTTLMKAADLEKDWFRYIIGDKIPGINPEDMETYI  285 (346)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHHHHHHHTTTCSTTCCHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
T ss_conf             98789999999843768899999999998762661025678999999999999999999999818776888899999999


Q ss_pred             HHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHHCCC-CCCCCCCCCHHHHHHHCCC-CCC
Q ss_conf             9999999997697867898-788867999972366-7847673212222443026-689
Q 537021.9.peg.7   81 QFIANRRCHQIGLEPLFKY-TENPFPWMSEVIDLK-KEKNFFETRVTEYQQGAGL-KWD  136 (136)
Q Consensus        81 ~y~an~rL~~lGl~~~f~~-~~nP~~W~~~~~~~~-~~~nFFE~r~~~Y~k~~~~-~~D  136 (136)
                      +|+||+||.+||++++|+. .+||+|||++++++. +++||||+|+|+|+||+.. .||
T Consensus       286 ~y~an~~L~~lG~~~~f~~~~~nP~~w~~~~~~~~~~~~nFFE~~~t~Y~k~~~~~~~D  344 (346)
T 2rcc_A          286 SFIANKRAVQLGMEKPYPEIKHNPMKWIRAYEDVNSGKSDFFEQKSRQYAKVSADNGFD  344 (346)
T ss_dssp             HHHHHHHHHHTTCCCSCTTCCSCSCTTC-------------------------------
T ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCC
T ss_conf             99999999977999999877789588999864347652588889778753267778866


No 3  
>1mxr_A Ribonucleotide reductase R2; radical protein, DI iron, oxidoreductase; 1.42A {Escherichia coli} SCOP: a.25.1.2 PDB: 1jpr_A 1jqc_A 1xik_A 1yfd_A 1piy_A 1r65_A 1biq_B* 1rsv_A 1piz_A 1piu_A 1pim_A 1rsr_A 1biq_A* 1rib_A 1mrr_A 1rnr_A* 1pj0_A 1pj1_A 1av8_A 1pfr_A ...
Probab=100.00  E-value=3.4e-36  Score=256.83  Aligned_cols=132  Identities=27%  Similarity=0.393  Sum_probs=121.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCCHHH
Q ss_conf             965255789989876999999999999842224----233024337999887899999999998874698-723879899
Q 537021.9.peg.7    1 MVGIAEQYQYIMRDESLHLNFGIDVINQIKIEN----PHLWTKEFQQKSRTMLHEATLLEIAYAHETMPK-GFVGLNAPS   75 (136)
Q Consensus         1 M~G~~~~i~~I~RDE~lH~~~~~~l~~~l~~e~----p~~~~~~~~~~i~~~~~eave~E~~~~~~~~~~-~~~Gl~~~~   75 (136)
                      |||+|++|+||+|||++|+.|++.+++.++++.    ++.++++++++|++++.+||++|++|++++|+. +++|||+++
T Consensus       224 m~g~~~~i~~I~RDE~~H~~f~~~l~~~l~~~~~~~~~~~~~~e~~~~i~~~~~eave~E~~~~~~~~~~~~~~glt~~~  303 (375)
T 1mxr_A          224 MEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDI  303 (375)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTTCCBTTBSHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
T ss_conf             86679999999842889999999999999843786245665899999999999999999999999863688858989999


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCC-CCCCCCCCHHHHHHHCC
Q ss_conf             9999999999999976978678987888679999723667-84767321222244302
Q 537021.9.peg.7   76 CEQYMQFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKK-EKNFFETRVTEYQQGAG  132 (136)
Q Consensus        76 ~~~Yi~y~an~rL~~lGl~~~f~~~~nP~~W~~~~~~~~~-~~nFFE~r~~~Y~k~~~  132 (136)
                      +++||+|+||+||.+||++++|+..+||+|||+.++++.+ ++||||+|+|+|+||+.
T Consensus       304 ~~~yi~y~an~rL~~LG~~~~f~~~~nP~~w~~~~~~~~~~~~nFFe~~~t~Y~~~~~  361 (375)
T 1mxr_A          304 LCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQI  361 (375)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCSCCCCCSCGGGGGTC----------------------
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHEEECCC
T ss_conf             9999999999999977999999999998367999870488754876687000123344


No 4  
>1h0o_A Ribonucleoside-diphosphate reductase; oxidoreductase, ribonucleotide reductase, dinuclear metal-cluster; 2.2A {Mus musculus} SCOP: a.25.1.2 PDB: 1h0n_A 1w68_A 1w69_A 1xsm_A 2uw2_A 3hf1_A 2vux_A
Probab=100.00  E-value=1.3e-35  Score=253.01  Aligned_cols=125  Identities=32%  Similarity=0.608  Sum_probs=116.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             96525578998987699999999999984222423302433799988789999999999887469872387989999999
Q 537021.9.peg.7    1 MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYM   80 (136)
Q Consensus         1 M~G~~~~i~~I~RDE~lH~~~~~~l~~~l~~e~p~~~~~~~~~~i~~~~~eave~E~~~~~~~~~~~~~Gl~~~~~~~Yi   80 (136)
                      |+|+|++|+||+|||++|+.|+|.|++.++.+.+       ++.+++++.+||++|++|++++|+.+++|||++++++||
T Consensus       253 M~G~~~~i~~I~RDE~lH~~f~~~l~~~l~~e~~-------~~~i~e~~~eavelE~~~~~~~~~~~~~Gln~~~~~~YI  325 (390)
T 1h0o_A          253 MPGLTFSNELISRDEGLHCDFACLMFKHLVHKPA-------EQRVREIITNAVRIEQEFLTEALPVKLIGMNCTLMKQYI  325 (390)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCC-------HHHHHHHHHHHHHHHHHHHHTTSCGGGGTCCHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH-------HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
T ss_conf             1316888799998899999999999998740216-------999999999999999999998567875898999999999


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCC
Q ss_conf             999999999769786789878886799997236678476732122224430266
Q 537021.9.peg.7   81 QFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAGLK  134 (136)
Q Consensus        81 ~y~an~rL~~lGl~~~f~~~~nP~~W~~~~~~~~~~~nFFE~r~~~Y~k~~~~~  134 (136)
                      +|+||+||.+||++++|++ +||+|||+ .++..+++||||+||++|+|+|.++
T Consensus       326 ky~an~~L~~LG~~~~f~~-~NP~~wme-~i~~~~ktnFFE~rvt~Y~k~g~~~  377 (390)
T 1h0o_A          326 EFVADRLMLELGFNKIFRV-ENPFDFME-NISLEGKTNFFEKRVGEYQRMGVMS  377 (390)
T ss_dssp             HHHHHHHHHHTTCCCSSCC-CCSCGGGC--------------------------
T ss_pred             HHHHHHHHHHCCCCCCCCC-CCCHHHHH-HHCCCCCCCCCCCCHHHCEECCCCC
T ss_conf             9999999997799998999-99609998-6224788777677723201565446


No 5  
>3n37_A Ribonucleoside-diphosphate reductase 2 subunit BE; ribonucleotide reductase, four-helix bundle, dimanganese CLU oxidoreductase; 1.65A {Escherichia coli} PDB: 3n38_A 3n39_B* 3n3a_B* 3n3b_B* 1r2f_A 2bq1_I* 2r2f_A
Probab=100.00  E-value=1.5e-34  Score=246.12  Aligned_cols=131  Identities=20%  Similarity=0.243  Sum_probs=122.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             96525578998987699999999999984222423302433799988789999999999887469872387989999999
Q 537021.9.peg.7    1 MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYM   80 (136)
Q Consensus         1 M~G~~~~i~~I~RDE~lH~~~~~~l~~~l~~e~p~~~~~~~~~~i~~~~~eave~E~~~~~~~~~~~~~Gl~~~~~~~Yi   80 (136)
                      |||+|++|+||+|||++|+.|++.|++.++++.|+.+++++++++++++++||++|.+|++++++.   |++++++++||
T Consensus       178 m~g~~~~i~~I~RDE~lH~~f~~~l~~~l~~e~~~~~~~~~~~~i~e~~~eav~~E~~~~~~~~~~---g~~~~~~~~yi  254 (319)
T 3n37_A          178 LTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREELKSFAFDLLLELYDNELQYTDELYAE---TPWADDVKAFL  254 (319)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTT---SSCHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHH
T ss_conf             856899999999788899999999999876528487765689999999999999999999998744---64227799999


Q ss_pred             HHHHHHHHHHCCCCCCCCCC---CCCHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCC
Q ss_conf             99999999976978678987---8886799997236678476732122224430266
Q 537021.9.peg.7   81 QFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKKEKNFFETRVTEYQQGAGLK  134 (136)
Q Consensus        81 ~y~an~rL~~lGl~~~f~~~---~nP~~W~~~~~~~~~~~nFFE~r~~~Y~k~~~~~  134 (136)
                      +|+||+||.+||++|+|+..   .||++|+...+++.+++||||+|||+|+||++..
T Consensus       255 ky~an~~L~~lG~~~~f~~~~~~~nP~~w~~~~~~~~~~~nFFE~~~t~Y~k~~~~~  311 (319)
T 3n37_A          255 CYNANKALMNLGYEPLFPAEMAEVNPAILAALSPNADENHDFFSGSGSSYVMGKAVE  311 (319)
T ss_dssp             HHHHHHHHHHTTCCCCSCGGGCCCCHHHHHHHCC-----------------------
T ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCC
T ss_conf             999999999779998889865788956899872066645688788701021056787


No 6  
>1jk0_A RNR Y2, ribonucleoside-diphosphate reductase small chain 1; ribonucleotide reductase, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: a.25.1.2 PDB: 1smq_A
Probab=100.00  E-value=1.4e-34  Score=246.22  Aligned_cols=124  Identities=32%  Similarity=0.559  Sum_probs=115.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             96525578998987699999999999984222423302433799988789999999999887469872387989999999
Q 537021.9.peg.7    1 MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYM   80 (136)
Q Consensus         1 M~G~~~~i~~I~RDE~lH~~~~~~l~~~l~~e~p~~~~~~~~~~i~~~~~eave~E~~~~~~~~~~~~~Gl~~~~~~~Yi   80 (136)
                      |+|+|++|+||+|||++|+.|+|.|++.++.+.|       .+.+.+++.+||++|.+|+.++++.+++|||++++++||
T Consensus       279 M~Gl~~~i~~I~RDE~lH~~f~~~L~~~l~~e~~-------~~~v~~~i~eavelE~e~~~~~l~~~l~Gln~~~m~~YI  351 (419)
T 1jk0_A          279 MPGLTFSNELICRDEGLHTDFACLLFAHLKNKPD-------PAIVEKIVTEAVEIEQRYFLDALPVALLGMNADLMNQYV  351 (419)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCC-------HHHHHHHHHHHHHHHHHHHHTTSCGGGGTCCHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
T ss_conf             1526998899998999999999999999873210-------789999999999999999987327875799999999999


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHCCC
Q ss_conf             99999999976978678987888679999723667847673212222443026
Q 537021.9.peg.7   81 QFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAGL  133 (136)
Q Consensus        81 ~y~an~rL~~lGl~~~f~~~~nP~~W~~~~~~~~~~~nFFE~r~~~Y~k~~~~  133 (136)
                      +|+||+||.+||++++|++ +||+|||+ .++..++|||||+||++|+||+.+
T Consensus       352 ky~Anr~L~~LG~~~~f~~-~NP~~wme-~i~~~~ktnFFE~rvt~Y~k~~v~  402 (419)
T 1jk0_A          352 EFVADRLLVAFGNKKYYKV-ENPFDFME-NISLAGKTNFFEKRVSDYQKAGVM  402 (419)
T ss_dssp             HHHHHHHHHTTTCCCSSCC-CCCCGGGG-C-----------------------
T ss_pred             HHHHHHHHHHCCCCCCCCC-CCCCHHHH-HHCCCCCCCCCCCCHHHHHHCCCC
T ss_conf             9999999997699987899-99836888-734578777766768888762366


No 7  
>2p1i_A Ribonucleotide reductase, small chain; F222 twinning, plasmodb PY03671, structural genomics consortium, SGC, oxidoreductase; 2.70A {Plasmodium yoelii yoelii str}
Probab=100.00  E-value=3.1e-34  Score=243.94  Aligned_cols=124  Identities=31%  Similarity=0.616  Sum_probs=116.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             96525578998987699999999999984222423302433799988789999999999887469872387989999999
Q 537021.9.peg.7    1 MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYM   80 (136)
Q Consensus         1 M~G~~~~i~~I~RDE~lH~~~~~~l~~~l~~e~p~~~~~~~~~~i~~~~~eave~E~~~~~~~~~~~~~Gl~~~~~~~Yi   80 (136)
                      |+|+|++|+||+|||++|+.|++.|++.++.+.|       ++.+++++.+||++|.+|++++++.+++|++++++++||
T Consensus       212 m~g~~~~i~~I~RDE~lH~~f~~~l~~~l~~e~~-------e~~v~~~~~eave~E~~~~~~~~~~~~~gl~~~~~~~yi  284 (349)
T 2p1i_A          212 LHGLTFSNELISRDEGLHTDFNCLIYSLLENKLP-------ENVVQNIVKEAVEVERSFICESLPCDLIGMNSRLMSQYI  284 (349)
T ss_dssp             STTHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCC-------HHHHHHHHHHHHHHHHHHHTTTSCSTTTTCCHHHHHHHH
T ss_pred             CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC-------HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
T ss_conf             0205988788754287899899999999752088-------789999999999999999999702253345699999999


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHCCC
Q ss_conf             99999999976978678987888679999723667847673212222443026
Q 537021.9.peg.7   81 QFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAGL  133 (136)
Q Consensus        81 ~y~an~rL~~lGl~~~f~~~~nP~~W~~~~~~~~~~~nFFE~r~~~Y~k~~~~  133 (136)
                      +|+||+||.+||++|+|++ +||+|||+ .+++.+++||||+|+++|+|||++
T Consensus       285 ~y~an~~L~~LG~~~~f~~-~nP~~w~~-~~~~~~ktnFFe~r~t~Y~k~~~~  335 (349)
T 2p1i_A          285 EFVADRLLECLGCSKVFHS-KNPFNWMD-LISLQGKTNFFEKRVADYQKSGVM  335 (349)
T ss_dssp             HHHHHHHHHHTTCCCSSCC-CCSCCC---------------------------
T ss_pred             HHHHHHHHHHCCCCCCCCC-CCCCCHHH-HHCCCCCCCCCCCCHHHHHHCCCC
T ss_conf             9999999997799999999-99954577-853576778888876764316666


No 8  
>3dhz_A Ribonucleotide reductase subunit R2F; metal free, hydrogen bond, metal binding protein; 1.63A {Corynebacterium ammoniagenes} SCOP: a.25.1.2 PDB: 1kgo_A 1kgp_A 1oqu_A 1kgn_A 1uzr_A*
Probab=100.00  E-value=3.9e-33  Score=236.74  Aligned_cols=129  Identities=19%  Similarity=0.280  Sum_probs=118.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             96525578998987699999999999984222423302433799988789999999999887469872387989999999
Q 537021.9.peg.7    1 MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYM   80 (136)
Q Consensus         1 M~G~~~~i~~I~RDE~lH~~~~~~l~~~l~~e~p~~~~~~~~~~i~~~~~eave~E~~~~~~~~~~~~~Gl~~~~~~~Yi   80 (136)
                      |+|+|++|+||+|||++|+.|++.|++.++++.|+.+++++++.+++++++||++|++|++++|+.  +|++ +++++||
T Consensus       188 m~g~~~~i~~I~RDE~lH~~f~~~l~~~~~~~~~~~~~~e~~~~i~~~~~eav~~E~~~~~~~f~~--~gl~-~~i~~Yi  264 (329)
T 3dhz_A          188 LTNTADIIRLIIRDESVHGYYIGYKYQQGVKKLSEAEQEEYKAYTFDLMYDLYENEIEYTEDIYDD--LGWT-EDVKRFL  264 (329)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--TTCH-HHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCH-HHHHHHH
T ss_conf             834799999998548999999999999887776799888779999999999999999999998643--4636-9999999


Q ss_pred             HHHHHHHHHHCCCCCCCCCC---CCCHHHHHHHHCCCCCCCCCCCCHHHHHHHCC
Q ss_conf             99999999976978678987---88867999972366784767321222244302
Q 537021.9.peg.7   81 QFIANRRCHQIGLEPLFKYT---ENPFPWMSEVIDLKKEKNFFETRVTEYQQGAG  132 (136)
Q Consensus        81 ~y~an~rL~~lGl~~~f~~~---~nP~~W~~~~~~~~~~~nFFE~r~~~Y~k~~~  132 (136)
                      +|+||+||.+||++|+|+..   .||++|+...+++.+++||||+|+|+|++|+.
T Consensus       265 ky~an~rL~~lG~~~~f~~~~~~~~P~~~~~~~~~~~~~~nFFE~~~t~Y~~~~~  319 (329)
T 3dhz_A          265 RYNANKALNNLGYEGLFPTDETKVSPAILSSLSPNADENHDFFSGSGSSYVIGKA  319 (329)
T ss_dssp             HHHHHHHHHHTTCCCSSCGGGCCCCHHHHHHHC----------------------
T ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHCCC
T ss_conf             9999999997799988897667898166998720567567875476331021355


No 9  
>1jk0_B RNR Y4, ribonucleoside-diphosphate reductase small chain 2; ribonucleotide reductase, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: a.25.1.2 PDB: 1sms_A
Probab=99.98  E-value=5.5e-33  Score=235.78  Aligned_cols=125  Identities=24%  Similarity=0.461  Sum_probs=114.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             96525578998987699999999999984222423302433799988789999999999887469872387989999999
Q 537021.9.peg.7    1 MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYM   80 (136)
Q Consensus         1 M~G~~~~i~~I~RDE~lH~~~~~~l~~~l~~e~p~~~~~~~~~~i~~~~~eave~E~~~~~~~~~~~~~Gl~~~~~~~Yi   80 (136)
                      |+|+|++|+||+|||++|+.|++.|++.++.+.|       .+.+++++++||++|.+|+..+++.+++|++++++++||
T Consensus       206 m~g~~~~i~~I~RDE~lH~~f~~~l~~~l~~e~~-------~~~i~~~~~eave~e~~~~~~~~~~~~~gl~~~~~~~Yi  278 (345)
T 1jk0_B          206 MPGLAMANRNICRDRGAYTDFSCLLFAHLRTKPN-------PKIIEKIITEAVEIEKEYYSNSLPVEKFGMDLKSIHTYI  278 (345)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCC-------HHHHHHHHHHHHHHHHHHHTTSCC-----------CTHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH-------HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
T ss_conf             4115999889886899999999999999751000-------358999999999999999985456553365899999999


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCC
Q ss_conf             999999999769786789878886799997236678476732122224430266
Q 537021.9.peg.7   81 QFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKEKNFFETRVTEYQQGAGLK  134 (136)
Q Consensus        81 ~y~an~rL~~lGl~~~f~~~~nP~~W~~~~~~~~~~~nFFE~r~~~Y~k~~~~~  134 (136)
                      +|+||+||.+||++|+|++ +||+|||+... ..++|||||+|+|+|+|+|+++
T Consensus       279 ~y~an~~L~~lG~~~~f~~-~nP~~w~~~~~-~~~ktnFFe~r~t~Y~k~~~~~  330 (345)
T 1jk0_B          279 EFVADGLLQGFGNEKYYNA-VNPFEFMEDVA-TAGKTTFFEKKVSDYQKASDMS  330 (345)
T ss_dssp             HHHHHHHHHHTTCCCCC-------------------------------------
T ss_pred             HHHHHHHHHHCCCCCCCCC-CCCHHHHHHHH-CCCCCCCCCCCHHHCCCCCCCC
T ss_conf             9999999997799987899-99748999873-7677644577633120355566


No 10 
>2o1z_A Ribonucleotide reductase subunit R2; small subunit ribonucleotide reductase, oxidoreductase, DNA replication, iron, DIIRON, radical, R2 subunit; 2.40A {Plasmodium vivax}
Probab=99.94  E-value=2.2e-27  Score=198.96  Aligned_cols=100  Identities=28%  Similarity=0.575  Sum_probs=95.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             96525578998987699999999999984222423302433799988789999999999887469872387989999999
Q 537021.9.peg.7    1 MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYM   80 (136)
Q Consensus         1 M~G~~~~i~~I~RDE~lH~~~~~~l~~~l~~e~p~~~~~~~~~~i~~~~~eave~E~~~~~~~~~~~~~Gl~~~~~~~Yi   80 (136)
                      |+|+|++|+||+|||++|+.|++.+++.++.+.|       ++.+++++++||++|++|++++|+.+++|||++++++||
T Consensus       211 m~g~~~~i~~I~RDE~lH~~f~~~l~~~l~~~~~-------~e~i~~~~~eavelE~~~~~~~~~~~~~Gl~~~~~~~Yi  283 (311)
T 2o1z_A          211 LHGLTFSNELISRDEGLHTDFNCLIYSLLENKLP-------EEVVQNIVKEAVEVERSFICESLPCDLIGMNSRLMSQYI  283 (311)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCC-------HHHHHHHHHHHHHHHHTTBTTTBCCTTTTCCHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
T ss_conf             1508999999981498999999999999853299-------999999999999999999998767986799999999999


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCHHHHH
Q ss_conf             9999999997697867898788867999
Q 537021.9.peg.7   81 QFIANRRCHQIGLEPLFKYTENPFPWMS  108 (136)
Q Consensus        81 ~y~an~rL~~lGl~~~f~~~~nP~~W~~  108 (136)
                      +|+||+||.+||++|+|++ +||+|||+
T Consensus       284 ~y~an~~L~~lGl~~~f~~-~NP~~Wme  310 (311)
T 2o1z_A          284 EFVADRLLECLGSPKIFHA-KNPFNWMD  310 (311)
T ss_dssp             HHHHHHHHHHTTCCCSSCC-CCCCTTTT
T ss_pred             HHHHHHHHHHCCCCCCCCC-CCCCCCCC
T ss_conf             9999999997789998999-99987616


No 11 
>3mjo_A Ribonucleotide reductase subunit R2F; Mn ribonucleotide reductase, RNR, radical enzyme, split SIGN metallocofactor; 1.36A {Corynebacterium ammoniagenes} PDB: 1uzr_A*
Probab=99.93  E-value=7.3e-26  Score=189.06  Aligned_cols=109  Identities=19%  Similarity=0.291  Sum_probs=101.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             96525578998987699999999999984222423302433799988789999999999887469872387989999999
Q 537021.9.peg.7    1 MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYM   80 (136)
Q Consensus         1 M~G~~~~i~~I~RDE~lH~~~~~~l~~~l~~e~p~~~~~~~~~~i~~~~~eave~E~~~~~~~~~~~~~Gl~~~~~~~Yi   80 (136)
                      |||+|++|+||+|||++|+.|++.++++++++.|+.+++++++++++++.+||++|.+|++++|+.  +|++. ++++||
T Consensus       187 m~g~~~~i~~I~RDE~lH~~f~~~l~~~~~~e~~~~~~~~~~~~i~~~~~~ave~E~~~~~~~~~~--~gl~~-~i~~yv  263 (296)
T 3mjo_A          187 LTNTADIIRLIIRDESVHGYYIGYKYQQGVKKLSEAEQEEYKAYTFDLMYDLYENEIEYTEDIYDD--LGWTE-DVKRFL  263 (296)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--TTCHH-HHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCHH-HHHHHH
T ss_conf             834799999999999999999999999887877899988889999999999999999999998702--57299-999999


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCH-HHHHHHHC
Q ss_conf             999999999769786789878886-79999723
Q 537021.9.peg.7   81 QFIANRRCHQIGLEPLFKYTENPF-PWMSEVID  112 (136)
Q Consensus        81 ~y~an~rL~~lGl~~~f~~~~nP~-~W~~~~~~  112 (136)
                      +|+||+||.+||++|+|++.++|. ||+..+++
T Consensus       264 ~y~an~~L~~lG~~~~f~~~~~~~~P~i~~~l~  296 (296)
T 3mjo_A          264 RYNANKALNNLGYEGLFPTDETKVSPAILSSLS  296 (296)
T ss_dssp             HHHHHHHHHHTTCCCSSCGGGCCCCHHHHHHHC
T ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCC
T ss_conf             999999999788999999876888878872039


No 12 
>3ee4_A Probable ribonucleoside-diphosphate reductase; manganese, iron, DIIRON, carboxylate, oxidase, ligand, cavity, monooxygenase; HET: MYR; 1.90A {Mycobacterium tuberculosis}
Probab=99.80  E-value=8.7e-20  Score=149.18  Aligned_cols=121  Identities=14%  Similarity=0.162  Sum_probs=97.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             96525578998987699999999999984222423302433799988789999999999887469872387989999999
Q 537021.9.peg.7    1 MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYM   80 (136)
Q Consensus         1 M~G~~~~i~~I~RDE~lH~~~~~~l~~~l~~e~p~~~~~~~~~~i~~~~~eave~E~~~~~~~~~~~~~Gl~~~~~~~Yi   80 (136)
                      |||++++|+||+|||++|+.||+.+++.+++|+|+.++ .+++.+++++.+|+++|.++....++..++|++.+   +||
T Consensus       197 m~g~~~~i~~I~RDE~~H~~fg~~l~~~l~~e~p~~~~-~~~~~i~el~~~a~e~e~~~~~~~~~~~~~gl~~e---~yv  272 (323)
T 3ee4_A          197 LPGMQELVRRIGDDERRHMAWGTFTCRRHVAADDANWT-VFETRMNELIPLALRLIEEGFALYGDQPPFDLSKD---DFL  272 (323)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTHHHH-HHHHHHHHHHHHHHHHHHHHHHTTTTCCSTTCCHH---HHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH---HHH
T ss_conf             83299999999966999999999999999874930448-99999999999999999999987077766799999---999


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCC-CCCCCCCHHHH
Q ss_conf             999999999769786789878886799997236678-47673212222
Q 537021.9.peg.7   81 QFIANRRCHQIGLEPLFKYTENPFPWMSEVIDLKKE-KNFFETRVTEY  127 (136)
Q Consensus        81 ~y~an~rL~~lGl~~~f~~~~nP~~W~~~~~~~~~~-~nFFE~r~~~Y  127 (136)
                      +|+||++|.+||.-+  ....+|++|++--.+.... ..|.+.....-
T Consensus       273 ~Yvad~~l~~LG~i~--~a~~~p~~~~d~~~~p~~l~~~f~~~~~~~~  318 (323)
T 3ee4_A          273 QYSTDKGMRRFGTIS--NARGRPVAEIDVDYSPAQLEDTFADEDRRTL  318 (323)
T ss_dssp             HHHHHHHHHHHHHHH--TTTTCCGGGTCC-------------------
T ss_pred             HHHHHHHHHHCCCCC--CCCCCCHHHCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             999999998779931--2446997765777897999999999999998


No 13 
>2uw1_A Desaturase, plastid delta4 multifunctional acyl-ACYL carrier protein desaturase; electron transfer, four-helix bundle, oxidoreductase; HET: GVM; 1.95A {Hedera helix} PDB: 2uw1_B* 1oq4_A 1oq7_A 1oq9_A 1oqb_A 1afr_A 2j2f_A
Probab=89.45  E-value=0.42  Score=26.64  Aligned_cols=35  Identities=17%  Similarity=0.194  Sum_probs=30.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
Q ss_conf             65255789989876999999999999842224233
Q 537021.9.peg.7    2 VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHL   36 (136)
Q Consensus         2 ~G~~~~i~~I~RDE~lH~~~~~~l~~~l~~e~p~~   36 (136)
                      |-++++...|++||..|..|...+++.+..-+|.-
T Consensus       191 PvL~~i~~~IA~DE~rH~~fY~~~v~~~le~dPd~  225 (338)
T 2uw1_A          191 KKLAHICGSIASDEKRHATAYTKIVEKLAEIDPDT  225 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
T ss_conf             99999999998899999999999999998539388


No 14 
>1za0_A Possible acyl-[acyl-carrier protein] desaturase DESA2 (acyl-[ACP] desaturase) (stearoyl-ACP...; four-helix bundle; 2.00A {Mycobacterium tuberculosis H37RV} SCOP: a.25.1.2
Probab=89.19  E-value=0.72  Score=25.08  Aligned_cols=33  Identities=21%  Similarity=0.121  Sum_probs=29.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
Q ss_conf             652557899898769999999999998422242
Q 537021.9.peg.7    2 VGIAEQYQYIMRDESLHLNFGIDVINQIKIENP   34 (136)
Q Consensus         2 ~G~~~~i~~I~RDE~lH~~~~~~l~~~l~~e~p   34 (136)
                      |-++++..-|++||..|..|...+++.+..-+|
T Consensus       176 PvL~~i~~rIA~DE~rH~~fy~~~v~~~le~dp  208 (275)
T 1za0_A          176 PILAGLIDRIARDEVRHEEFFANLVTHCLDYTR  208 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             599999999988899999999999999986590


No 15 
>2oc5_A Hypothetical protein; NP_895059.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: UNL; 1.68A {Prochlorococcus marinus str} SCOP: a.25.1.6
Probab=88.76  E-value=1.3  Score=23.34  Aligned_cols=82  Identities=13%  Similarity=0.190  Sum_probs=47.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCHHHH-HHHHHH
Q ss_conf             557899898769999999999998422242330243379998878999999999988746987-238798999-999999
Q 537021.9.peg.7    5 AEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKG-FVGLNAPSC-EQYMQF   82 (136)
Q Consensus         5 ~~~i~~I~RDE~lH~~~~~~l~~~l~~e~p~~~~~~~~~~i~~~~~eave~E~~~~~~~~~~~-~~Gl~~~~~-~~Yi~y   82 (136)
                      .+|.+=..+||.+|+.||..-++.-.        +..++++.+.-++..-+-..-++.+-.+. ++||.++.+ .+|+--
T Consensus       148 RkITegVVkDEY~HLN~Ge~WLk~~f--------~~~K~el~~AN~~nLPlv~~ML~qV~~Da~vL~Meke~lvedFmi~  219 (244)
T 2oc5_A          148 RKITEGVVKDEYTHLNYGEAWLKANL--------ESCREELLEANRENLPLIRRMLDQVAGDAAVLQMDKEDLIEDFLIA  219 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCHHHHHHHHHH--------HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf             88877676447765025899999999--------9999999998885054999999999878999778899999999999


Q ss_pred             HHHHHHHHCCCCC
Q ss_conf             9999999769786
Q 537021.9.peg.7   83 IANRRCHQIGLEP   95 (136)
Q Consensus        83 ~an~rL~~lGl~~   95 (136)
                      . ...|.++|+..
T Consensus       220 Y-~eAL~~IGf~~  231 (244)
T 2oc5_A          220 Y-QESLTEIGFNT  231 (244)
T ss_dssp             H-HHHHHHHTCCH
T ss_pred             H-HHHHHHCCCCH
T ss_conf             9-99999759758


No 16 
>2inc_A Toluene, O-xylene monooxygenase oxygenase subunit; DIIRON, 4-helix bundle, carboxylate bridge, metalloenzyme, oxidoreductase; HET: P6G; 1.85A {Pseudomonas stutzeri} SCOP: a.25.1.2 PDB: 2ind_A* 1t0q_A 1t0r_A 1t0s_A 2rdb_A*
Probab=77.66  E-value=3.8  Score=20.33  Aligned_cols=90  Identities=19%  Similarity=0.123  Sum_probs=51.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHCCCCCCCCCHHHHH
Q ss_conf             65255789989876999999999999842224233024337999887899999999----99887469872387989999
Q 537021.9.peg.7    2 VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEI----AYAHETMPKGFVGLNAPSCE   77 (136)
Q Consensus         2 ~G~~~~i~~I~RDE~lH~~~~~~l~~~l~~e~p~~~~~~~~~~i~~~~~eave~E~----~~~~~~~~~~~~Gl~~~~~~   77 (136)
                      +.++.++..|.+||+-|..+|..+++.+..+.+.   ..++..+...|=.+..+=.    -..+|..+...-..+-+  +
T Consensus       217 ~~t~t~~~siqsDEaRH~~~G~~~l~~l~e~~~~---~~lQ~~vd~~fW~~~r~~~~l~g~~~dY~~p~~~~~~s~~--e  291 (491)
T 2inc_A          217 HTFASLISSIQTDESRHAQQGGPSLKILVENGKK---DEAQQMVDVAIWRSWKLFSVLTGPIMDYYTPLESRNQSFK--E  291 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHTTCH---HHHHHHHHHHHHHHHHHHHHHTHHHHHHTSCGGGCCSCHH--H
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH--H
T ss_conf             2079999986058989887589999999857877---9999999999998889999999989874485545287899--9


Q ss_pred             HHHHHHHH---HHHHHCCCCCC
Q ss_conf             99999999---99997697867
Q 537021.9.peg.7   78 QYMQFIAN---RRCHQIGLEPL   96 (136)
Q Consensus        78 ~Yi~y~an---~rL~~lGl~~~   96 (136)
                      -+-+++.+   ++|..+|+.+.
T Consensus       292 ~~~ew~~~~~~~~l~~yGl~~P  313 (491)
T 2inc_A          292 FMLEWIVAQFERQLLDLGLDKP  313 (491)
T ss_dssp             HHHHHTHHHHHHHHHHHTCCCC
T ss_pred             HHHHHHHHHHHHHHHHHCCCCC
T ss_conf             9999989999999998389987


No 17 
>3ge3_A Toluene-4-monooxygenase system protein A; DIIRON hydroxylase, effector protein, T201A, aromatic hydrocarbons catabolism, FAD, flavoprotein; 1.52A {Pseudomonas mendocina} PDB: 3ge8_A 3dhi_A* 3dhh_A* 3dhg_A* 3i5j_A 3i63_A
Probab=62.28  E-value=8.2  Score=18.16  Aligned_cols=88  Identities=19%  Similarity=0.134  Sum_probs=48.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHCCCCCCCCCHHHHHHH
Q ss_conf             25578998987699999999999984222423302433799988789999999999----88746987238798999999
Q 537021.9.peg.7    4 IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAY----AHETMPKGFVGLNAPSCEQY   79 (136)
Q Consensus         4 ~~~~i~~I~RDE~lH~~~~~~l~~~l~~e~p~~~~~~~~~~i~~~~~eave~E~~~----~~~~~~~~~~Gl~~~~~~~Y   79 (136)
                      ++.++..|.+||+-|..+|..+++.+.+..+   .+.++..+-..|=.+..+=...    .+|..+...--.+-+..  +
T Consensus       220 ~~tv~~siqsDEaRH~~~G~~~lk~l~e~~n---~~~lQ~~vd~wfwr~~~~~~~l~G~~~dY~~~~~~r~~s~~e~--~  294 (500)
T 3ge3_A          220 FANLISSIQTDESRHAQQGGPALQLLIENGK---REEAQKKVDMAIWRAWRLFAVLTGPVMDYYTPLEDRSQSFKEF--M  294 (500)
T ss_dssp             HHHHHHHHHHHHHHHGGGHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGCSSCHHHH--H
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH--H
T ss_conf             9999999988999999858999999996776---6999999999999889999988888888448663225349999--9


Q ss_pred             HHHHH---HHHHHHCCCCCC
Q ss_conf             99999---999997697867
Q 537021.9.peg.7   80 MQFIA---NRRCHQIGLEPL   96 (136)
Q Consensus        80 i~y~a---n~rL~~lGl~~~   96 (136)
                      -+++.   =++|..+|+.+.
T Consensus       295 ~ew~~g~~~~~L~~~Gl~~P  314 (500)
T 3ge3_A          295 YEWIIGQFERSLIDLGLDKP  314 (500)
T ss_dssp             HHHTTTTHHHHHHHTTCCCC
T ss_pred             HHHHHHHHHHHHHHHCCCCC
T ss_conf             99988999999998279986


No 18 
>3hl1_A Ferritin like protein; NP_419375.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.95A {Caulobacter vibrioides}
Probab=57.55  E-value=9.8  Score=17.63  Aligned_cols=27  Identities=19%  Similarity=0.108  Sum_probs=24.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             255789989876999999999999842
Q 537021.9.peg.7    4 IAEQYQYIMRDESLHLNFGIDVINQIK   30 (136)
Q Consensus         4 ~~~~i~~I~RDE~lH~~~~~~l~~~l~   30 (136)
                      ..++|+=|+++|.+|....++|++.+-
T Consensus        43 a~~lI~sVa~EEMlHm~laaNiLnAiG   69 (317)
T 3hl1_A           43 PYRLIQAAVYQEMLHAQLVSNIANAYG   69 (317)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             999999999999999999999999808


No 19 
>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1
Probab=52.05  E-value=12  Score=17.06  Aligned_cols=82  Identities=15%  Similarity=0.096  Sum_probs=51.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             65255789989876999999999999842224233024--------------3379998878999999999988746987
Q 537021.9.peg.7    2 VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTK--------------EFQQKSRTMLHEATLLEIAYAHETMPKG   67 (136)
Q Consensus         2 ~G~~~~i~~I~RDE~lH~~~~~~l~~~l~~e~p~~~~~--------------~~~~~i~~~~~eave~E~~~~~~~~~~~   67 (136)
                      ++++.+.+.++++|..|......+++.+....+.....              .......++++.|+..|...+...-. -
T Consensus        49 ~~~k~~f~~la~eE~~H~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ai~~E~~a~~~Y~~-l  127 (175)
T 2fzf_A           49 EALKEKINWLAEEEKKHEALLRKLYSQMFPGKEVVFPKEHIGPELQPVARELEKVQDIIDLIRWAMKAEEIAAEFYLK-L  127 (175)
T ss_dssp             TTHHHHHHHHHHHTHHHHHHHHHHHHHHSTTCCCCCCSCCBSCCCCCCCSCCCSHHHHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH-H
T ss_conf             789999999999999999999999997379866320243210344677775025678999999999999999999999-9


Q ss_pred             CCCCCHHHHHHHHHHHH
Q ss_conf             23879899999999999
Q 537021.9.peg.7   68 FVGLNAPSCEQYMQFIA   84 (136)
Q Consensus        68 ~~Gl~~~~~~~Yi~y~a   84 (136)
                      ....+-..+.+-++.++
T Consensus       128 a~~~~d~~~~~~~~~i~  144 (175)
T 2fzf_A          128 EEMVKEEEKKRLMRYLA  144 (175)
T ss_dssp             HHTSCSHHHHHHHHHHH
T ss_pred             HHHCCCHHHHHHHHHHH
T ss_conf             88589999999999999


No 20 
>1nfv_A Bacterioferritin; 24 subunits in the active molecule, DIIRON centre, HAEM Fe-coproporphyrin III cofactor; HET: FEC; 1.95A {Desulfovibrio desulfuricans} SCOP: a.25.1.1 PDB: 1nf6_A* 1nf4_A*
Probab=50.55  E-value=13  Score=16.91  Aligned_cols=62  Identities=16%  Similarity=0.055  Sum_probs=38.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             965255789989876999999999999842224233024---337999887899999999998874
Q 537021.9.peg.7    1 MVGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTK---EFQQKSRTMLHEATLLEIAYAHET   63 (136)
Q Consensus         1 M~G~~~~i~~I~RDE~lH~~~~~~l~~~l~~e~p~~~~~---~~~~~i~~~~~eave~E~~~~~~~   63 (136)
                      ++|++...+-++.+|..|..-....+..+- ..|.+...   .....+.+++..+.+.|...+..+
T Consensus        42 ~~~la~~f~~~a~eE~~Ha~~lae~i~~lG-g~p~~~~~~~~~~~~~~~e~l~~~l~~E~~~~~~y  106 (179)
T 1nfv_A           42 YGELAANMKLIAIDEMRHAENFAERIKELG-GEPTTQKEGKVVTGQAVPVIYESDADQEDATIEAY  106 (179)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCSSCCCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             589999999999999999999999999759-99765602026677999999999999999999999


No 21 
>3e2c_A Bacterioferritin; DIIRON site, iron storage, metal-binding, heme, iron, oxidoreductase; HET: HEM; 1.80A {Escherichia coli} PDB: 2vxi_A* 1bfr_A* 1bcf_A* 2htn_A* 3e1j_A* 3e1l_A* 3e1m_A* 3e1n_A* 3e1o_A* 3e1p_A* 3ghq_A* 3e1q_A*
Probab=49.41  E-value=13  Score=16.79  Aligned_cols=15  Identities=20%  Similarity=0.224  Sum_probs=10.9

Q ss_pred             CCCHHHHHHHHHHHH
Q ss_conf             965255789989876
Q 537021.9.peg.7    1 MVGIAEQYQYIMRDE   15 (136)
Q Consensus         1 M~G~~~~i~~I~RDE   15 (136)
                      |+|..+++++.++.=
T Consensus         1 M~~~~~ii~~Ln~~l   15 (158)
T 3e2c_A            1 MKGDTKVINYLNKLL   15 (158)
T ss_dssp             CCCCHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHH
T ss_conf             999899999999999


No 22 
>3ez0_A Uncharacterized protein with ferritin-like fold; YP_832262.1, protein of unknown function with ferritin-like fold, structural genomics; HET: UNL TLA; 2.33A {Arthrobacter SP}
Probab=47.70  E-value=14  Score=16.62  Aligned_cols=90  Identities=13%  Similarity=0.132  Sum_probs=51.0

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHCCCCCCCCCHHHH
Q ss_conf             52557899898769999999999998422242330243379998878999999999------988746987238798999
Q 537021.9.peg.7    3 GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIA------YAHETMPKGFVGLNAPSC   76 (136)
Q Consensus         3 G~~~~i~~I~RDE~lH~~~~~~l~~~l~~e~p~~~~~~~~~~i~~~~~eave~E~~------~~~~~~~~~~~Gl~~~~~   76 (136)
                      .++.++.-+.+|+. |.+|+..-++.+....|+.-. .+....+.+.-++..+=..      -....+..+..+-+.+.+
T Consensus       126 ~~a~~~~kvl~e~~-h~~~~~~~l~~~i~~d~~~~~-rlalw~RRl~geal~~~~~v~~~~~~l~~l~~~~~~~~~~~~l  203 (225)
T 3ez0_A          126 GTRDVIEQIQASDE-TTEVLRERLRSALADDPRLAS-RLALWGRRLLGEALTQAQRVSYEHAFLGSLIGGEDSAAAKELV  203 (225)
T ss_dssp             HHHHHHHHHSCCHH-HHHHHHHHHHHHHHHCTTHHH-HHHHHHHHHHHHHHHHHHHHHHHTCCHHHHC-----CHHHHHH
T ss_pred             HHHHHHHHHHCCHH-HHHHHHHHHHHHHHCCHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHH
T ss_conf             89999999973004-899999999999855857788-9999999889999998575234655789887214566778889


Q ss_pred             HHHH---HHHHHHHHHHCCCC
Q ss_conf             9999---99999999976978
Q 537021.9.peg.7   77 EQYM---QFIANRRCHQIGLE   94 (136)
Q Consensus        77 ~~Yi---~y~an~rL~~lGl~   94 (136)
                      ....   .-.-.+||..||+-
T Consensus       204 ~~~~~~l~~~H~~RM~~LGLt  224 (225)
T 3ez0_A          204 SGLIAGLAEKHSKRMTQLGLT  224 (225)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCC
T ss_pred             HHHHHHHHHHHHHHHHHCCCC
T ss_conf             999999999999999981889


No 23 
>1mty_D Methane monooxygenase hydroxylase; dinuclear iron center monooxygenase; 1.70A {Methylococcus capsulatus str} SCOP: a.25.1.2 PDB: 1mmo_D 1xvb_A 1fyz_A 1fz0_A 1fz2_A 1fz3_A 1fz4_A 1fz5_A 1fz6_A 1fz7_A 1fz8_A 1fz9_A 1fzh_A 1fzi_A 1xmf_A 1xmg_A 1xmh_A 1xu3_A 1xu5_A 1fz1_A ...
Probab=45.09  E-value=15  Score=16.36  Aligned_cols=90  Identities=12%  Similarity=0.042  Sum_probs=45.2

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHCCCCCCCCC-HHHHH
Q ss_conf             52557899898769999999999998422242330243379998878999999----99998874698723879-89999
Q 537021.9.peg.7    3 GIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLL----EIAYAHETMPKGFVGLN-APSCE   77 (136)
Q Consensus         3 G~~~~i~~I~RDE~lH~~~~~~l~~~l~~e~p~~~~~~~~~~i~~~~~eave~----E~~~~~~~~~~~~~Gl~-~~~~~   77 (136)
                      -+.+.+.-|..||+-|..+|-.++..+..+ |. .-+.++..+...|=.+..+    ---..+|..+...  .+ ++.-+
T Consensus       217 ~~~tl~~SiqsDEaRH~~~g~~tL~~ll~d-~~-n~~~~q~~id~aFWr~~r~~~~l~G~~mDY~tp~r~--~s~~e~w~  292 (512)
T 1mty_D          217 ITPTVFLSIETDELRHMANGYQTVVSIAND-PA-SAKYLNTDLNNAFWTQQKYFTPVLGMLFEYGSKFKV--EPWVKTWD  292 (512)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCS--SCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHCCHHHHHHHHHC-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC--HHHHHHHH
T ss_conf             589999999814988865229999999846-20-379999999999999999999999888870787654--16999999


Q ss_pred             HHH-HH-HHH--HHHHHCCCCCC
Q ss_conf             999-99-999--99997697867
Q 537021.9.peg.7   78 QYM-QF-IAN--RRCHQIGLEPL   96 (136)
Q Consensus        78 ~Yi-~y-~an--~rL~~lGl~~~   96 (136)
                      .|| +. .+-  ++|...|+.++
T Consensus       293 ~~i~ed~~g~~~~~L~~yGl~~P  315 (512)
T 1mty_D          293 RWVYEDWGGIWIGRLGKYGVESP  315 (512)
T ss_dssp             HHHTTTTTTHHHHTTGGGTCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             99999999999999998389999


No 24 
>3gvy_A Bacterioferritin; iron storage, DI-iron, ferroxida activity, heme, metal binding protein; HET: HEM; 2.80A {Rhodobacter sphaeroides}
Probab=44.37  E-value=16  Score=16.29  Aligned_cols=14  Identities=29%  Similarity=0.387  Sum_probs=8.1

Q ss_pred             CCCHHHHHHHHHHH
Q ss_conf             96525578998987
Q 537021.9.peg.7    1 MVGIAEQYQYIMRD   14 (136)
Q Consensus         1 M~G~~~~i~~I~RD   14 (136)
                      |+|..++|++.++.
T Consensus         1 m~~~~e~i~~Ln~~   14 (161)
T 3gvy_A            1 MQGDAKVIEYLNAA   14 (161)
T ss_dssp             CCCCHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHH
T ss_conf             99979999999999


No 25 
>3chh_A P-aminobenzoate N-oxygenase; DI-iron oxygenase, oxidoreductase; 2.00A {Streptomyces thioluteus} PDB: 3chi_A 3cht_A* 3chu_A 2jcd_A
Probab=41.47  E-value=17  Score=16.00  Aligned_cols=29  Identities=17%  Similarity=0.220  Sum_probs=17.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCH
Q ss_conf             57899898769999999999998422242
Q 537021.9.peg.7    6 EQYQYIMRDESLHLNFGIDVINQIKIENP   34 (136)
Q Consensus         6 ~~i~~I~RDE~lH~~~~~~l~~~l~~e~p   34 (136)
                      .+++.-.+||.-|+.|+..+++.....-+
T Consensus       218 ~v~~iHv~DEARHisfa~e~l~~~~~~l~  246 (336)
T 3chh_A          218 LITTLHLRDETAHGSIVVEVVRELYARMN  246 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             99999999998899999999999998699


No 26 
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIRON center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=40.11  E-value=18  Score=15.87  Aligned_cols=30  Identities=13%  Similarity=0.315  Sum_probs=25.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             965255789989876999999999999842
Q 537021.9.peg.7    1 MVGIAEQYQYIMRDESLHLNFGIDVINQIK   30 (136)
Q Consensus         1 M~G~~~~i~~I~RDE~lH~~~~~~l~~~l~   30 (136)
                      .+++++..+-++.+|..|......++..+-
T Consensus        59 ~~~iA~~F~~~A~eE~~HA~~~~~~i~~l~   88 (202)
T 1yuz_A           59 YEQIARLFEATAAAELIHIGLEYALVAEME   88 (202)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             899999999999999999999999987215


No 27 
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubredoxin-like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=35.93  E-value=21  Score=15.45  Aligned_cols=28  Identities=14%  Similarity=0.172  Sum_probs=21.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9652557899898769999999999998
Q 537021.9.peg.7    1 MVGIAEQYQYIMRDESLHLNFGIDVINQ   28 (136)
Q Consensus         1 M~G~~~~i~~I~RDE~lH~~~~~~l~~~   28 (136)
                      .+++++..+-++++|..|.......++.
T Consensus        39 ~~~iA~~F~~~A~eE~~HA~~~~~~i~~   66 (191)
T 1lko_A           39 FVQISDIFAETADQEREHAKRLFKFLEG   66 (191)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             8999999999999999999999999756


No 28 
>1o9i_A Pseudocatalase; oxidoreductase, hexamer, dimanganese catalase, metalloenzyme, preoxidase; HET: MES; 1.33A {Lactobacillus plantarum} SCOP: a.25.1.3 PDB: 1jkv_A 1jku_A
Probab=34.09  E-value=23  Score=15.25  Aligned_cols=29  Identities=10%  Similarity=0.048  Sum_probs=23.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             25578998987699999999999984222
Q 537021.9.peg.7    4 IAEQYQYIMRDESLHLNFGIDVINQIKIE   32 (136)
Q Consensus         4 ~~~~i~~I~RDE~lH~~~~~~l~~~l~~e   32 (136)
                      ....+.=|+..|.-|++..+.+++.|.+.
T Consensus        55 ~kdlL~dIatEEl~HlEmlat~I~~L~~~   83 (266)
T 1o9i_A           55 YKDLLLDTGTEEMAHVEMISTMIGYLLED   83 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             99999999999989999999999998169


No 29 
>2wtl_A Bacterioferritin, BFR; metal binding protein, bacterioferritin A, heme, iron, biliverdin, iron storage, metal-binding; HET: UNL; 2.59A {Mycobacterium tuberculosis} PDB: 3bkn_A*
Probab=33.26  E-value=23  Score=15.17  Aligned_cols=27  Identities=22%  Similarity=0.027  Sum_probs=12.6

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             525578998987699999999999984
Q 537021.9.peg.7    3 GIAEQYQYIMRDESLHLNFGIDVINQI   29 (136)
Q Consensus         3 G~~~~i~~I~RDE~lH~~~~~~l~~~l   29 (136)
                      |++...+-.+.+|.-|.......+..+
T Consensus        43 ~la~~f~~~a~eE~~Ha~~l~e~I~~l   69 (173)
T 2wtl_A           43 ELAAHTRAESFDEMRHAEEITDRILLL   69 (173)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             999999999999999999999999985


No 30 
>2kp7_A Crossover junction endonuclease MUS81; helix-hairpin-helix, tumour suppressor, DNA damage, DNA recombination, DNA repair, hydrolase, magnesium; NMR {Mus musculus}
Probab=32.10  E-value=14  Score=16.69  Aligned_cols=38  Identities=21%  Similarity=0.357  Sum_probs=23.1

Q ss_pred             CCCCCCCCCCCCCH--HHHHHHHCCCCCCCCCCCCHHHHHHHC
Q ss_conf             69786789878886--799997236678476732122224430
Q 537021.9.peg.7   91 IGLEPLFKYTENPF--PWMSEVIDLKKEKNFFETRVTEYQQGA  131 (136)
Q Consensus        91 lGl~~~f~~~~nP~--~W~~~~~~~~~~~nFFE~r~~~Y~k~~  131 (136)
                      ++..|+- ...||+  .|++++.+..+..|-.  ++..|.+|-
T Consensus         5 ~~~r~~P-s~~N~lfi~~L~e~~~~~~~k~~k--~~~aY~kA~   44 (87)
T 2kp7_A            5 ASVRPLP-VCPNPLFVRWLTEWRDEAASRGRH--TRFVFQKAL   44 (87)
T ss_dssp             ---CCCC-CSCCCHHHHHHHHHHHHHHHHTCT--THHHHHHHH
T ss_pred             CCCCCCC-CCCCHHHHHHHHHHHHHHHHCCCH--HHHHHHHHH
T ss_conf             7889999-998899999999999999870735--799999999


No 31 
>2inp_C Phenol hydroxylase component PHL; DIIRON, four-helix bundle, regulatory protein, oxidoreductase; 2.30A {Pseudomonas stutzeri} PDB: 2inn_C
Probab=30.89  E-value=25  Score=14.92  Aligned_cols=84  Identities=10%  Similarity=-0.009  Sum_probs=56.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Q ss_conf             25578998987699999999999984222423302433799988789999999999887469872387989999999999
Q 537021.9.peg.7    4 IAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTKEFQQKSRTMLHEATLLEIAYAHETMPKGFVGLNAPSCEQYMQFI   83 (136)
Q Consensus         4 ~~~~i~~I~RDE~lH~~~~~~l~~~l~~e~p~~~~~~~~~~i~~~~~eave~E~~~~~~~~~~~~~Gl~~~~~~~Yi~y~   83 (136)
                      ++..+..+..|+.-|...+..|++.+..|.|+ ....++..+.+=.-.|.+.=..++.-+.     |   ++...-++-.
T Consensus       243 ~~~l~~~~~~d~~r~~rw~~alvk~~~~e~~~-Nr~~l~~Wi~~W~~~a~~Al~~~a~~~~-----~---~~a~~~~~~~  313 (328)
T 2inp_C          243 VSMLTEFMRDWYKESLRWTNAMMKAVAGESET-NRELLQKWIDHWEPQAYEALKPLAEASV-----G---IDGLNEARAE  313 (328)
T ss_dssp             GGGGGHHHHHHHHHHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHHHHHHHHHHHHHHTTT-----C---THHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCC-----C---HHHHHHHHHH
T ss_conf             48999988879999999999999999806832-5999999999999999999998876415-----6---0589999999


Q ss_pred             HHHHHHHCCCCCC
Q ss_conf             9999997697867
Q 537021.9.peg.7   84 ANRRCHQIGLEPL   96 (136)
Q Consensus        84 an~rL~~lGl~~~   96 (136)
                      ...||..|||+..
T Consensus       314 ~~~~l~~~gL~~~  326 (328)
T 2inp_C          314 LSARLKKFELQSR  326 (328)
T ss_dssp             HHHHHHTTTCCCC
T ss_pred             HHHHHHHCCCCCC
T ss_conf             9999996699988


No 32 
>1nnq_A Rubrerythrin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.35A {Pyrococcus furiosus} SCOP: a.25.1.1 g.41.5.1 PDB: 2hr5_A
Probab=28.00  E-value=29  Score=14.60  Aligned_cols=29  Identities=17%  Similarity=0.235  Sum_probs=23.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             96525578998987699999999999984
Q 537021.9.peg.7    1 MVGIAEQYQYIMRDESLHLNFGIDVINQI   29 (136)
Q Consensus         1 M~G~~~~i~~I~RDE~lH~~~~~~l~~~l   29 (136)
                      ++.+++..+-++.+|..|......++..+
T Consensus        38 ~~~iA~~F~~~A~~E~~HA~~~~~~l~~~   66 (171)
T 1nnq_A           38 FPNIAKLFRAIAYAEFVHAKNHFIALGKL   66 (171)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             59999999999999999999999997542


No 33 
>3fvb_A Bacterioferritin; niaid, ssgcid, decode, structural genomics, seattle structural genomics center for infectious disease; HET: HEM; 1.81A {Brucella melitensis biovar ABORTUS2308}
Probab=25.73  E-value=31  Score=14.33  Aligned_cols=59  Identities=20%  Similarity=0.101  Sum_probs=28.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH---HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             65255789989876999999999999842224233024---3379998878999999999988
Q 537021.9.peg.7    2 VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWTK---EFQQKSRTMLHEATLLEIAYAH   61 (136)
Q Consensus         2 ~G~~~~i~~I~RDE~lH~~~~~~l~~~l~~e~p~~~~~---~~~~~i~~~~~eave~E~~~~~   61 (136)
                      +|++...+-++.+|.-|..-....+..+- -.|.+..-   .....+.++++.+++.|...+.
T Consensus        59 ~~la~~f~~~A~EE~~HA~~l~e~I~~lG-G~p~~~~~~~~~~~~~~~e~l~~~l~~E~~~~~  120 (182)
T 3fvb_A           59 TRLAKKEREESIEEMHHADKLIDRIIFLE-GFPNLQTVSPLRIGQNVKEVLEADLKGEYDARA  120 (182)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CCCCCSBCCCCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999999999999769-973466557675789999999999998999999


No 34 
>1vjx_A Putative ferritin-like DIIRON-carboxylate protein TM1526; structural genomics, JCSG, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1
Probab=25.63  E-value=31  Score=14.32  Aligned_cols=84  Identities=12%  Similarity=0.076  Sum_probs=47.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             6525578998987699999999999984222423302----------------433799988789999999999887469
Q 537021.9.peg.7    2 VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLWT----------------KEFQQKSRTMLHEATLLEIAYAHETMP   65 (136)
Q Consensus         2 ~G~~~~i~~I~RDE~lH~~~~~~l~~~l~~e~p~~~~----------------~~~~~~i~~~~~eave~E~~~~~~~~~   65 (136)
                      +++..+...++.+|.-|......+++.+....+....                ......+.+++..|+..|..-+.....
T Consensus        42 ~~~~~~f~~la~eE~~H~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ai~~E~~a~~~Y~~  121 (157)
T 1vjx_A           42 GEIKKTFLELADQERIHAEIFRKMSDQENWDEVDSYLAGYAFYEVFPDTSEILRRKDLTLKEVLDIAISVEKDSIILYYE  121 (157)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTCBCCSBCCCCCCCCCTTGGGCSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999999999998617985427777764222367777775147888999999999838889999999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHH
Q ss_conf             872387989999999999999
Q 537021.9.peg.7   66 KGFVGLNAPSCEQYMQFIANR   86 (136)
Q Consensus        66 ~~~~Gl~~~~~~~Yi~y~an~   86 (136)
                      . ....+-..++..++.+++.
T Consensus       122 l-~~~~~d~~~r~~~~~l~~e  141 (157)
T 1vjx_A          122 L-KDGLVNSDAQKTVKKIIDQ  141 (157)
T ss_dssp             H-HHHCCSHHHHHHHHHHHHH
T ss_pred             H-HHHCCCHHHHHHHHHHHHH
T ss_conf             9-9877999999999999999


No 35 
>2qqy_A Sigma B operon; dodecameric alpha-helical, ferritin fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Bacillus anthracis str}
Probab=25.18  E-value=32  Score=14.27  Aligned_cols=59  Identities=17%  Similarity=0.112  Sum_probs=32.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH--HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             652557899898769999999999998422242330--243379998878999999999988
Q 537021.9.peg.7    2 VGIAEQYQYIMRDESLHLNFGIDVINQIKIENPHLW--TKEFQQKSRTMLHEATLLEIAYAH   61 (136)
Q Consensus         2 ~G~~~~i~~I~RDE~lH~~~~~~l~~~l~~e~p~~~--~~~~~~~i~~~~~eave~E~~~~~   61 (136)
                      +|++...+-++.+|..|.......+..+-.. |...  .......+.+++..+++.|..-+.
T Consensus        42 ~~~~~~f~~~a~eE~~Ha~~l~~~i~~lGg~-p~~~~~~~~~~~~~~e~L~~al~~E~~~~~  102 (149)
T 2qqy_A           42 QVLKPFFESEISDEQGHALYLAEKIKTLGGT-PTTIPLRVKQAEDVREMLEYARQSEYETIK  102 (149)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-CCCCCCCCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999999999999999999999874998-776753101125689999999999999999


No 36 
>1jgc_A Bacterioferritin, BFR; iron storage protein, metal binding protein; HET: HEM; 2.60A {Rhodobacter capsulatus} SCOP: a.25.1.1
Probab=23.24  E-value=35  Score=14.03  Aligned_cols=14  Identities=21%  Similarity=0.318  Sum_probs=9.5

Q ss_pred             CCCHHHHHHHHHHH
Q ss_conf             96525578998987
Q 537021.9.peg.7    1 MVGIAEQYQYIMRD   14 (136)
Q Consensus         1 M~G~~~~i~~I~RD   14 (136)
                      |+|..++|++.++.
T Consensus         1 M~~~~~ii~~Ln~~   14 (161)
T 1jgc_A            1 MKGDAKVIEFLNAA   14 (161)
T ss_dssp             CCCCHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHH
T ss_conf             99989999999999


No 37 
>2v8t_A Manganese-containing pseudocatalase; manganese catalase, oxidoreductase; 0.98A {Thermus thermophilus} PDB: 2v8u_A 2cwl_A
Probab=20.71  E-value=39  Score=13.70  Aligned_cols=30  Identities=23%  Similarity=0.305  Sum_probs=23.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
Q ss_conf             557899898769999999999998422242
Q 537021.9.peg.7    5 AEQYQYIMRDESLHLNFGIDVINQIKIENP   34 (136)
Q Consensus         5 ~~~i~~I~RDE~lH~~~~~~l~~~l~~e~p   34 (136)
                      ...+.=|.-.|.-|++..+.+|..|....|
T Consensus        60 ~dlL~dIatEEl~HlEmlat~I~~Ll~~~p   89 (302)
T 2v8t_A           60 YDLIANIATEELGHIELVAATINSLLAKNP   89 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHCSST
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             999999999999999999999999965897


Done!