HHsearch alignment for GI: peg_753 and conserved domain: PRK00448
>PRK00448 polC DNA polymerase III PolC; Validated.
Probab=100.00 E-value=0 Score=1545.78 Aligned_cols=791 Identities=23% Similarity=0.300 Sum_probs=664.8
Q ss_pred CHHHHHHCHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCC----
Q ss_conf 1334331444764432998999999997899889981165177499999999976996389999998547664334----
Q 537021.9.peg.7 11 FVHLQVHSSYSLLEGALSLNNILDKIAADQQPAIAITDTNNLFSALEFSQKACAAGIQPIIGCQLDIDMQDNLKMT---- 86 (1033)
Q Consensus 11 FvhLh~hS~ySlldg~~~~e~LV~~A~~~G~~AiAITD~~nl~Gav~F~~ackk~gIKPIiG~E~~v~~~~~~~~~---- 86 (1033)
T Consensus 333 RVELH~HT~mS~mDg~~~~~~lv~~A~~wGh~AiAITDHg~vq~fPe~~~~~kk~~iK~IyG~E~y~v~d~~~iv~n~~~ 412 (1436)
T PRK00448 333 RVELHLHTKMSTMDAIPSVSELVKQAAKWGHKAIAITDHGVVQAFPEAYEAAKKAGIKVIYGVEANLVDDGVPIVYNEVD 412 (1436)
T ss_pred EEEEEECCCCCHHCCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCEEECCCC
T ss_conf 48986147751020688999999999984998799943650647999999876559848976479974277741337877
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 537021.9.peg.7 87 -------------------------------------------------------------------------------- 86 (1033)
Q Consensus 87 -------------------------------------------------------------------------------- 86 (1033)
T Consensus 413 ~~l~~~~yVvFDiETTGls~~~d~IiEigAvki~~g~iid~f~~fi~P~~~i~~~i~~lT~Itd~mv~~~~~~~evl~~f 492 (1436)
T PRK00448 413 RDLKDATYVVFDVETTGLSAVYDEIIEIGAVKIKNGEIIDKFEEFIKPGHPLSAFTTELTGITDDMVKDAPSIEEVLPKF 492 (1436)
T ss_pred CCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEECCEEEEEEHHHCCCCCCCCHHHHHCCCCCHHHHCCCCCHHHHHHHH
T ss_conf 74676637998600688886667236875798637817541021038999797545321478847863898789999999
Q ss_pred --------------------------------------------------------------------CCCC--------
Q ss_conf --------------------------------------------------------------------4565--------
Q 537021.9.peg.7 87 --------------------------------------------------------------------NQGK-------- 90 (1033)
Q Consensus 87 --------------------------------------------------------------------~~~~-------- 90 (1033)
T Consensus 493 ~~f~~d~vlVAHNa~FD~~Fi~~~~~~~~~~~~~~p~iDTl~lsr~l~p~~k~~~L~~l~k~~~v~~~~hHRA~~Da~~t 572 (1436)
T PRK00448 493 KEFCGDSVLVAHNASFDVGFINTNYEKLGLEKIKNPVIDTLELSRFLYPEYKSHRLNTLAKKFGVELEHHHRADYDAEAT 572 (1436)
T ss_pred HHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCEECHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHH
T ss_conf 99828977998458656889999999808986679723029989875510111447889988488865454432238889
Q ss_pred -------------------------------CCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf -------------------------------6666775399995696899999999989973248778740078999863
Q 537021.9.peg.7 91 -------------------------------TPFPTVPSIVLLVSTAEGYQRLIELVSRMYLLDQGKQSVRICLSWLQEI 139 (1033)
Q Consensus 91 -------------------------------~~~~~~~~lvlLAkN~~Gy~nL~kL~S~a~~~~~~~~~p~i~~~~L~e~ 139 (1033)
T Consensus 573 ~~i~~~~l~~~~~~~i~~~~~ln~~~~~~~~~~~~~~yHlilLAkN~~G~kNL~KLvS~s~~e-gFy~kPRIdk~lL~~- 650 (1436)
T PRK00448 573 AYLLIKFLKDLKEKGITNLDELNKKLGSEDAYKKARPKHATILAKNQVGLKNLFKLVSLSNTK-YFYRVPRIPRSLLDK- 650 (1436)
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHC-CCCCCCCCCHHHHHH-
T ss_conf 999999999998748743788865313411331377735999995578899999999999864-675789989999998-
Q ss_pred CCCCEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHH--HHCC-CCEEEEEECCCHHHH----HHHHHHHHHHHHHCCCEE
Q ss_conf 489889981976796788887799789999999998--7659-868999943991158----999999999998189899
Q 537021.9.peg.7 140 GTEGLIMLTGGSSGPIDRAFFFNSSQVAEKRLLTFK--KLFG-DRLYVNLQRHRGYDR----YRESQVVQLAYTHELPLV 212 (1033)
Q Consensus 140 ~~egLIvlsg~~~g~i~~~l~~~~~~~a~~~l~~l~--~~Fg-d~~ylEl~~~~~~e~----~~~~~l~~lA~~~~iPlV 212 (1033)
T Consensus 651 yreGLI~~SaC~~GEv~~~il~~~~eea~~~a~~YDyiEI~p~~n~~~~i~~~~i~~e~~l~~in~~li~lak~~~~pvV 730 (1436)
T PRK00448 651 YREGLLIGSACEEGEVFDAMLQKGDEEVEEIAKFYDFIEIQPPANYQHLIERELIKDEEELEEIIKNLIELGKKLNKPVV 730 (1436)
T ss_pred HCCCCEEECCCCCCHHHHHHHCCCHHHHHHHHHHCCCEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEE
T ss_conf 53991994787657999999818999999999753713347833358999757982299999999999999999699889
Q ss_pred EECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHH------HHHHHHHHHHHHH-HHH
Q ss_conf 808830078788999987668846985765310024534323434788751220358------9987886411100-013
Q 537021.9.peg.7 213 ATNNSLFLSEEDYEAHDVLMAVAHSTVVSQKDRPRVTPDHYLKNRSEMVSIFSDLPE------ALENTVEIARRCS-FIL 285 (1033)
Q Consensus 213 aTndv~Y~~~~D~~~h~iL~aI~~~~~l~~~~~~~~~~~~yLks~eEM~~~f~~~pe------Ai~NT~~IAe~c~-~~l 285 (1033)
T Consensus 731 ATnDvHYl~~eD~~~~diLl~~q~~~~~~--~r~-~~~~~y~kTteEMl~~F~~l~e~~a~eivi~NT~~IAd~~e~i~p 807 (1436)
T PRK00448 731 ATGDVHYLDPEDKIYRKILVASQGGGNPL--NRF-PLPELHFRTTDEMLDEFSFLGEELAKEIVVENTNKIADMIEDIEP 807 (1436)
T ss_pred EECCCCCCCHHHHHHHHHHHCCCCCCCCC--CCC-CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 97887779877899999995116689823--467-788852089999999860389878668987669999986026331
Q ss_pred HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf 32210234555756887768988999876541034201246432457838999998877898986063055788899999
Q 537021.9.peg.7 286 QVHAPILPRFIEKECDDIQKEEENELRNKAVAGLEVRLAQGAIAKGYHAQDYRQRLDFELNVIARMKFSGYFLIVADFIQ 365 (1033)
Q Consensus 286 ~~~~~~lP~f~~p~~~~~~~~~~~~Lr~l~~~Gl~~R~~~~~~~~~~~~~~y~~RLe~EL~vI~~~gf~~YFLiV~Div~ 365 (1033)
T Consensus 808 ~~~~l~~P~~e---------~a~e~lr~l~~~~a~~~YG~~l------Peiv~~RLe~EL~vIi~~GFa~yyLIv~dlV~ 872 (1436)
T PRK00448 808 IKDKLYTPKIE---------GAEEEIRELTYKKAHEIYGEPL------PEIVEKRIEKELNSIIGNGFAVIYLISQKLVK 872 (1436)
T ss_pred CCCCCCCCCCC---------CHHHHHHHHHHHHHHHHCCCCC------CHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHH
T ss_conf 78887899989---------9799999999867898718999------89999999999999984699567328999999
Q ss_pred HHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHH-----------------------------------------CCCHH
Q ss_conf 8510476433444420466776554403756333-----------------------------------------23105
Q 537021.9.peg.7 366 WAKKNNIPVGPGRGSGAGSVTAYALTITDIDPLR-----------------------------------------FSLLF 404 (1033)
Q Consensus 366 ~ak~~gI~vGpGRGSAagSLVaY~LgIT~VDPi~-----------------------------------------~~LlF 404 (1033)
T Consensus 873 ~s~~~Gy~VGp-RGSvgsSlVAy~lgITeVnPL~pHY~Cp~Cky~ef~~~g~~~sGyDLpdk~CP~Cg~~l~kdGhdIpF 951 (1436)
T PRK00448 873 KSLEDGYLVGS-RGSVGSSFVATMIGITEVNPLPPHYVCPNCKYSEFFTDGSVGSGYDLPDKDCPKCGTKLKKDGHDIPF 951 (1436)
T ss_pred HHHHCCCEECC-CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 99867972478-86389999999827776479972225765540000246654657778656686434300257788671
Q ss_pred HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC
Q ss_conf 67621001457875333656878999999983038021554220778778899999997527998898865431014589
Q 537021.9.peg.7 405 ERFLNPDRMSMPDFDIDFCQDRRDEVIRYVQNKYGHERVAQIITFGSLQAKAALRDVGRALQMPYSQVDRLCKLIPNDPA 484 (1033)
Q Consensus 405 ERFLnp~R~~~PDIDiDf~~~~R~~vi~y~~~kyG~~~va~i~t~~t~~~k~aird~~r~~g~~~~~~~~~~~~i~~~~~ 484 (1033)
T Consensus 952 ErFLgfer~k~PDIDldFs~e~q~~vh~Yv~~~yG~d~V~ragTigT~a~KtA~G~v---k~y~e------------~~~ 1016 (1436)
T PRK00448 952 ETFLGFKGDKVPDIDLNFSGEYQPVAHNYTKVLFGEDHVFRAGTIGTVAEKTAYGYV---KGYEE------------DRN 1016 (1436)
T ss_pred HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHH---HHHHH------------HHC
T ss_conf 430288999899988676823568999999998496657886306668998999999---86588------------718
Q ss_pred CCCCHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCC--CHHHHEECCCCC---CCCCEEEEEE
Q ss_conf 82443445229887886430742026889872011221002447440335256--666620012367---6886688510
Q 537021.9.peg.7 485 HPVSLQAIADDSRFREARLADPSVDRLLEISQKLEGLYRHASTHAAGIVIGDR--PLSQLVPMYRDV---RSDLPVTQFN 559 (1033)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~leg~~r~~~~Ha~Gvvi~~~--~l~~~~p~~~~~---~~~~~~~q~d 559 (1033)
T Consensus 1017 ~~----------------~~---~aei~rlA~~leGvkRttGqHaaGIVIvP~~~~i~dftPlq~padd~~~~~~tThFd 1077 (1436)
T PRK00448 1017 KF----------------YR---GAEIDRLAKGCTGVKRTTGQHPGGIIVVPDYMDIYDFTPIQYPADDVNSEWKTTHFD 1077 (1436)
T ss_pred CC----------------CC---CHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEC
T ss_conf 86----------------76---268999998677999876828988998289876120055004677888884897102
Q ss_pred CHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHHH--------------CCC
Q ss_conf 213343112321356541789999999988740254343323443588998762014101221--------------145
Q 537021.9.peg.7 560 MKWIEKAGLIKFDFLGLKTLTLLQKSLDFLAQRGVKVDLSLIPFDDHETYHLLTTKGTLGIFQ--------------LES 625 (1033)
Q Consensus 560 ~~~~e~~gl~K~D~Lgl~~L~~i~~~~~~i~~~~~~~d~~~ip~~D~~~~~l~~~g~t~GvFQ--------------~es 625 (1033)
T Consensus 1078 ~~si~~-~LLKmDfLGhd~pTvIr~l~dlt---g--iD~~~IPldD~~t~~Lfss~e~lGV~~~~~~~~tGtlGipEFgT 1151 (1436)
T PRK00448 1078 FHSIHD-NLLKLDILGHDDPTMIRMLQDLT---G--IDPKTIPMDDPKVMSLFSSTEALGVTPEQIGEKTGTLGIPEFGT 1151 (1436)
T ss_pred CCCHHC-CEEEEECCCCCCHHHHHHHHHHH---C--CCHHHCCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCC
T ss_conf 330315-81465337899568999999863---9--88442899988999987087746758777177656304643465
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHH--HHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 3478888771740488887665411411342003--68885046578502696673341033553001256898878863
Q 537021.9.peg.7 626 SGMRQALEGMQPDCIEDIIALVSLYRPGPIDNIV--VYNNRKNGKEKIVSIHPLIDPMLKETQGVIIYQEQVMQIAQLLS 703 (1033)
Q Consensus 626 ~~~~~~l~~~~p~~~~dl~~~~al~RPGp~~~~~--~yi~rk~g~e~~~~~hp~l~~iL~~T~Gv~vyQEQvm~ia~~~a 703 (1033)
T Consensus 1152 ~fvR~mL~~~kP~~F~DLi~IsgLsHGtdVwl~Naq~lI~~~---------~~~L~----e---vI~~rddIM~yLi~-~ 1214 (1436)
T PRK00448 1152 KFVRQMLEETKPKTFAELVQISGLSHGTDVWLGNAQELIKEG---------IATLS----D---VIGCRDDIMVYLIH-K 1214 (1436)
T ss_pred HHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHCC---------CCCCC----C---EEEEHHHHHHHHHH-H
T ss_conf 889999997699979999999704578644433578998708---------87603----5---56417879999999-6
Q ss_pred CCCHHHH----HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 2684130----788976201211016778789999986249999999999999997500013310147888999999999
Q 537021.9.peg.7 704 GYSLSEA----DVLRRAMGKKIKEEMDKQKERFISGASKNGISKTIAVNIFELLAKFADYGFNKSHAAAYAVISYQTAWM 779 (1033)
Q Consensus 704 g~~~~ea----d~lRra~~kk~~~~~~~~~~~f~~g~~~~g~~~~~a~~i~~~i~~f~~Y~FnksHa~aya~~~y~~ayl 779 (1033)
T Consensus 1215 gl~~~~AF~IME~vRKGkg---------~~~e~~~~m~~~~Vp~wyidsc----~KI-kY~FnKaHAaAY~lmAyrtAyl 1280 (1436)
T PRK00448 1215 GLEPKMAFKIMEKVRKGKG---------LTEEEEELMKENNVPDWYIESC----KKI-KYMFPKAHAAAYVLMALRIAYF 1280 (1436)
T ss_pred HCCCCHHHHHHHHHHHHCC---------CCHHHHHHHHHCCCCHHHHHHH----HHC-CCCCCCHHHHHHHHHHHHHHHH
T ss_conf 5061058999999986668---------9878999999869958999888----870-8388828999999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCCHH---------------------------------HHHHHHHHHHCCCCCCCCCCCCCCE
Q ss_conf 9730266677751002354202---------------------------------5899988886368503552334210
Q 537021.9.peg.7 780 KTHYPVEFLAASMTLEMDNVEK---------------------------------IKKFCQDARQFNIQIMPPSVNTPCV 826 (1033)
Q Consensus 780 K~~yP~eF~aa~L~~~~~~~~~---------------------------------~~~~i~e~~~~gi~vl~PdIN~S~~ 826 (1033)
T Consensus 1281 K~hYP~efyAA~fT~r~~~fD~~~~~~g~~~i~~~i~ei~~~~~~~~~ke~~~~~~le~~~Em~~rGi~~lppDinkS~a 1360 (1436)
T PRK00448 1281 KVHYPLAYYAAYFSVRADDFDLETMSKGKEAIKAKMEEINAKGNDASKKEKDLLTVLEIALEMLERGFKFQKVDLYKSDA 1360 (1436)
T ss_pred HHCCHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCC
T ss_conf 83778999999841553443277762438889999999987301222001114779999999997798453884024578
Q ss_pred -EEEECCCEEEEEHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCC
Q ss_conf -0353198698502685896989999999998379999978999734824799899998886767234790
Q 537021.9.peg.7 827 -DFKVGDNRIYYSLAAIKGVGTTTARHIMEASADKPFDSLEDFCSRVDSKKLNRRVLESLVFAGALDCFGY 896 (1033)
Q Consensus 827 -~f~~~~~~Ir~Gl~~Ikgvg~~~~~~Ive~r~~g~f~sl~df~~rv~~~~~nk~~le~Li~aGAfD~~~~ 896 (1033)
T Consensus 1361 ~~F~i~~~~Ir~pl~AIkgvG~~aa~~IveaR~eg~F~S~eDf~~R~---kvnKtviE~L~~~G~ld~Lpe 1428 (1436)
T PRK00448 1361 TEFIIEGDTLIPPFNAIPGLGENVAKSIVEAREEGEFLSKEDLRKRT---KVSKTLIEKLDELGILDDLPE 1428 (1436)
T ss_pred CCEEECCCEEEECHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHC---CCCHHHHHHHHHCCCCCCCCH
T ss_conf 54077299077674664461199999999998079989989999876---786899999997699789982