HHsearch alignment for GI: peg_753 and conserved domain: PRK05898
>PRK05898 dnaE DNA polymerase III DnaE; Validated.
Probab=100.00 E-value=0 Score=2250.93 Aligned_cols=930 Identities=32% Similarity=0.540 Sum_probs=854.0
Q ss_pred CHHHHHHCHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCC
Q ss_conf 13343314447644329989999999978998899811651774999999999769963899999985476643344565
Q 537021.9.peg.7 11 FVHLQVHSSYSLLEGALSLNNILDKIAADQQPAIAITDTNNLFSALEFSQKACAAGIQPIIGCQLDIDMQDNLKMTNQGK 90 (1033)
Q Consensus 11 FvhLh~hS~ySlldg~~~~e~LV~~A~~~G~~AiAITD~~nl~Gav~F~~ackk~gIKPIiG~E~~v~~~~~~~~~~~~~ 90 (1033)
T Consensus 2 FvhLh~hS~YSlLdg~~~i~~lv~~A~e~g~~alALTD~~nl~Gav~Fy~~akk~gIKPIiG~E~~~~------------ 69 (971)
T PRK05898 2 FINLNTHSHYSLLSSTLSIDDIIKFALDNNQPYVCLTDLNNLYGCIEFYDKAKAHNLIPIIGLEIEYQ------------ 69 (971)
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEEEECC------------
T ss_conf 26767887363016246999999999985999899986888879999999999879944989999827------------
Q ss_pred CCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHCCCHHHHHHH
Q ss_conf 66667753999956968999999999899732487787400789998634898899819767967888877997899999
Q 537021.9.peg.7 91 TPFPTVPSIVLLVSTAEGYQRLIELVSRMYLLDQGKQSVRICLSWLQEIGTEGLIMLTGGSSGPIDRAFFFNSSQVAEKR 170 (1033)
Q Consensus 91 ~~~~~~~~lvlLAkN~~Gy~nL~kL~S~a~~~~~~~~~p~i~~~~L~e~~~egLIvlsg~~~g~i~~~l~~~~~~~a~~~ 170 (1033)
T Consensus 70 ---~~~~~LvLLAkN~~GY~NL~kLsS~~~~~~~~---------~l~~~-~~~l~ii--~~~g~~--------------- 119 (971)
T PRK05898 70 ---STNATLVLYAKNYNGYLNLIKISSFIMTNKEF---------EIQDY-LDDLFIV--CKKGTF--------------- 119 (971)
T ss_pred ---CCCCEEEEECCCHHHHHHHHHHHHHHHHCCCC---------HHHHH-CCCCEEE--ECCCCC---------------
T ss_conf ---99943999849899999999999998608963---------47665-2982899--279980---------------
Q ss_pred HHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 99998765986899994399115899999999999818989980883007878899998766884698576531002453
Q 537021.9.peg.7 171 LLTFKKLFGDRLYVNLQRHRGYDRYRESQVVQLAYTHELPLVATNNSLFLSEEDYEAHDVLMAVAHSTVVSQKDRPRVTP 250 (1033)
Q Consensus 171 l~~l~~~Fgd~~ylEl~~~~~~e~~~~~~l~~lA~~~~iPlVaTndv~Y~~~~D~~~h~iL~aI~~~~~l~~~~~~~~~~ 250 (1033)
T Consensus 120 ------~~~-----------------~~~~~~~~~~~~~~~Vatndv~y~~~eD~~~~~~l~~I~~~~~l~~~~~~~~~~ 176 (971)
T PRK05898 120 ------VFK-----------------SPNFYQTHNQNAPNAIAFNSVFYANKNDKIVFNAMLAIKNDLKIDELKNCQDFD 176 (971)
T ss_pred ------CCC-----------------CHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf ------547-----------------637999974579981775776417876699999999981699647640024476
Q ss_pred CCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 43234347887512203589987886411100013322102345557568877689889998765410342012464324
Q 537021.9.peg.7 251 DHYLKNRSEMVSIFSDLPEALENTVEIARRCSFILQVHAPILPRFIEKECDDIQKEEENELRNKAVAGLEVRLAQGAIAK 330 (1033)
Q Consensus 251 ~~yLks~eEM~~~f~~~peAi~NT~~IAe~c~~~l~~~~~~lP~f~~p~~~~~~~~~~~~Lr~l~~~Gl~~R~~~~~~~~ 330 (1033)
T Consensus 177 ~~~~~s~~em~~lf~--~~al~Nt~~Ia~~C~~~l~~~~~~lP~f~~p~g~----~~~eyLr~l~~~Gl~~R~~~~---~ 247 (971)
T PRK05898 177 NNHFLNDNEAQSLFS--PIQLDNLNKVLNELKVEIHDLPINIIKYDKQNSI----ISSEILKQLCISGLNKRLNAN---D 247 (971)
T ss_pred CCCCCCHHHHHHHCC--CHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCC----CHHHHHHHHHHHHHHHHCCCC---C
T ss_conf 243689999988687--1999999999997335502478779999888999----989999999998999861677---5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCHHHHHHHH
Q ss_conf 57838999998877898986063055788899999851047643344442046677655440375633323105676210
Q 537021.9.peg.7 331 GYHAQDYRQRLDFELNVIARMKFSGYFLIVADFIQWAKKNNIPVGPGRGSGAGSVTAYALTITDIDPLRFSLLFERFLNP 410 (1033)
Q Consensus 331 ~~~~~~y~~RLe~EL~vI~~~gf~~YFLiV~Div~~ak~~gI~vGpGRGSAagSLVaY~LgIT~VDPi~~~LlFERFLnp 410 (1033)
T Consensus 248 ~~~~~~y~eRL~~EL~VI~~mGf~~YFLIV~D~I~~Ak~~gI~vGPGRGSaAGSLVaY~LgIT~iDPi~~~LlFERFLnp 327 (971)
T PRK05898 248 GQVKKIYVKRLKYELDIINEKQFDDYFLIVYDFINFAKSNGIIIGPGRGSAAGSLIAYLLHITDIDPIKYNLIFERFLNP 327 (971)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCHHHHCCC
T ss_conf 32339999999999999997599874689999999999759721788762698999999748775822158747765686
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHH
Q ss_conf 01457875333656878999999983038021554220778778899999997527998898865431014589824434
Q 537021.9.peg.7 411 DRMSMPDFDIDFCQDRRDEVIRYVQNKYGHERVAQIITFGSLQAKAALRDVGRALQMPYSQVDRLCKLIPNDPAHPVSLQ 490 (1033)
Q Consensus 411 ~R~~~PDIDiDf~~~~R~~vi~y~~~kyG~~~va~i~t~~t~~~k~aird~~r~~g~~~~~~~~~~~~i~~~~~~~~~~~ 490 (1033)
T Consensus 328 eR~smPDIDiDf~~~rR~eVi~Yv~~kYG~~~va~I~Tf~t~~ak~aiRDv~rvlg~~~~~~d~i~k~i~~~~~~~l~-~ 406 (971)
T PRK05898 328 TRKSMPDIDTDIMDERRDEVVEYLFEKYGNDHVAHIITFQRIKAKMAIRDVGRILGIDLKVIDKICKNIKPDYEEDLD-L 406 (971)
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHH-H
T ss_conf 657899864338854499999999999498668987320213688999999997299999999999736888787989-9
Q ss_pred HHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHEECCCCCCCCCEEEEEECHHHHHHCCCH
Q ss_conf 45229887886430742026889872011221002447440335256666620012367688668851021334311232
Q 537021.9.peg.7 491 AIADDSRFREARLADPSVDRLLEISQKLEGLYRHASTHAAGIVIGDRPLSQLVPMYRDVRSDLPVTQFNMKWIEKAGLIK 570 (1033)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~a~~leg~~r~~~~Ha~Gvvi~~~~l~~~~p~~~~~~~~~~~~q~d~~~~e~~gl~K 570 (1033)
T Consensus 407 a~~~~~~l~~~~~~---~~~l~~~a~~leG~~R~~s~HAaGvVIs~~~l~~~vPl~~~~-~~~~vtQ~d~~~~E~~GLlK 482 (971)
T PRK05898 407 AIKKNTILKEMYVL---HKELFDLAKKIINAPRQIGTHAAGVVLSNSLLTNIIPIQLGI-NDRPLSQYSMEYLERFGLIK 482 (971)
T ss_pred HHHHCCCCHHHHHH---HHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCEEECC-CCCEEEEEEHHHHHHCCCCC
T ss_conf 97637021023366---899999999853984433556662583077745036614668-89846874668788659800
Q ss_pred HHHHHHCCHHHHHHHHHHHHH-HCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 135654178999999998874-0254343323443588998762014101221145347888877174048888766541
Q 537021.9.peg.7 571 FDFLGLKTLTLLQKSLDFLAQ-RGVKVDLSLIPFDDHETYHLLTTKGTLGIFQLESSGMRQALEGMQPDCIEDIIALVSL 649 (1033)
Q Consensus 571 ~D~Lgl~~L~~i~~~~~~i~~-~~~~~d~~~ip~~D~~~~~l~~~g~t~GvFQ~es~~~~~~l~~~~p~~~~dl~~~~al 649 (1033)
T Consensus 483 ~DfLGLr~LtvI~~~~~~i~~~~~~~id~~~ipldD~~t~~ll~~G~T~GvFQlES~gm~~~l~~lkP~~feDlia~~AL 562 (971)
T PRK05898 483 MDLLGLKNLTIIDNVLKLIKENQNKKIDLFNINLNDKNVFEDLAKGRTNGIFQLESPGMKKVLKKVKPQNIEDISIVSAL 562 (971)
T ss_pred HHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHCCCCCCEEEECCHHHHHHHHHCCCCCHHHHHHHHHH
T ss_conf 23434038999999999999851987657762325299999996176663502077899999997599979999999986
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHH
Q ss_conf 14113420036888504657850269667334103355300125689887886326841307889762012110167787
Q 537021.9.peg.7 650 YRPGPIDNIVVYNNRKNGKEKIVSIHPLIDPMLKETQGVIIYQEQVMQIAQLLSGYSLSEADVLRRAMGKKIKEEMDKQK 729 (1033)
Q Consensus 650 ~RPGp~~~~~~yi~rk~g~e~~~~~hp~l~~iL~~T~Gv~vyQEQvm~ia~~~ag~~~~ead~lRra~~kk~~~~~~~~~ 729 (1033)
T Consensus 563 ~RPGP~~~i~~yi~rk~g~e~v~y~hp~l~~IL~~TyGvivYQEQVMqia~~lagfslgeAD~lRram~KK~~~~m~~~~ 642 (971)
T PRK05898 563 FRPGPQQNIKTFVERRFKREEFSYWNEATKKILEPTHGIIVYQEQVINLVKTIANFDIATADNFRRAISKKDEKILIQLK 642 (971)
T ss_pred CCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 18776556437887654898888889999986036785686599999999999499988999999986558777999999
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 89999986249999999999999997500013310147888999999999973026667775100235420258999888
Q 537021.9.peg.7 730 ERFISGASKNGISKTIAVNIFELLAKFADYGFNKSHAAAYAVISYQTAWMKTHYPVEFLAASMTLEMDNVEKIKKFCQDA 809 (1033)
Q Consensus 730 ~~f~~g~~~~g~~~~~a~~i~~~i~~f~~Y~FnksHa~aya~~~y~~aylK~~yP~eF~aa~L~~~~~~~~~~~~~i~e~ 809 (1033)
T Consensus 643 ~~Fi~ga~~~g~~~~~a~~if~~i~~Fa~YgFNkSHs~aYa~iayqtAyLKahyP~eF~aalL~~~~~~~~k~~~~i~ea 722 (971)
T PRK05898 643 KDFIEGALKNNYKQPLVNQIFEYIFSFADYGFNHSHSLAYSYISYWMAYLKHYYPLEFLSILLSHTSASKDKLLSYLNEA 722 (971)
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHH
T ss_conf 99999999769999999999999998606676689999999999999999854789999998468999975799999999
Q ss_pred HHCCCCCCCCCCCCCCEEEEECC--CEEEEEHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHH
Q ss_conf 86368503552334210035319--8698502685896989999999998379999978999734824799899998886
Q 537021.9.peg.7 810 RQFNIQIMPPSVNTPCVDFKVGD--NRIYYSLAAIKGVGTTTARHIMEASADKPFDSLEDFCSRVDSKKLNRRVLESLVF 887 (1033)
Q Consensus 810 ~~~gi~vl~PdIN~S~~~f~~~~--~~Ir~Gl~~Ikgvg~~~~~~Ive~r~~g~f~sl~df~~rv~~~~~nk~~le~Li~ 887 (1033)
T Consensus 723 ~~~gi~vlpPdIN~S~~~f~~~~~~~~Ir~GL~aIKgvG~~~~~~Iv~~R~~g~f~~~~df~~Rv~~~~~nk~~lE~LI~ 802 (971)
T PRK05898 723 KEFNISIKKPDINYSSNSFVLDTQKQIIRFGFNTIKGFGDELLKKIKSALQNKTFSDFISYIDALKKNNVSLSNIEILIN 802 (971)
T ss_pred HHCCCEECCCCCCCCCCCEEEECCCCEEEEEHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCHHCCCHHHHHHHHH
T ss_conf 98699273882257778527857998699764760785599999999986689999999999853700089999999997
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH-HHHHHHHHCEEECCC
Q ss_conf 7672347903899999899999999988654312777866665555655776668999988899-985788726211638
Q 537021.9.peg.7 888 AGALDCFGYSRMQLLQSLDNIQKYAQWVEKNRTNKHENIFAHEKGTFSDKITLEKFSVENSSVR-FENEQRVLGFYFSGH 966 (1033)
Q Consensus 888 aGAfD~~~~~R~~ll~~i~~~~~~~~~~~~~~~~~q~~LF~~~~~~~~~~~~~~~~~~~~~~e~-l~~E~e~LGf~lS~H 966 (1033)
T Consensus 803 aGAfD~fg~nR~~ll~~l~~~~~~~~~---------~~~~~~~~-----~~~~~~~~~~~~~e~~l~~Eke~lG~yls~h 868 (971)
T PRK05898 803 VGTFDSFKLSRLFLLNNLPEIFEKTSL---------NGHFFELN-----LVGLEYAKDMSVKERFLKKEIQYLGIDLNSL 868 (971)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHH---------CCCCCCCC-----CCCCCCCCCCCHHHHHHHHHHHHHEEEECCC
T ss_conf 188757783599999858999998740---------36411212-----2352125532145788898799875331478
Q ss_pred CHHHHHHHHHHC----CCCCHHHHHCCCCCCEEEEEEEEEEEEEECCCCCCEEEEEEEECCCCEEEEEECC
Q ss_conf 558999999874----8976889850558988999999961121015888769999998497049999539
Q 537021.9.peg.7 967 PLDVYKPILRKM----GIKGYEESVATIRGNNIRLAAMVVSKQQKKTRKGSRIGWVTFSEPAKEYEANFFP 1033 (1033)
Q Consensus 967 Pl~~~~~~l~~~----~~~~~~~~~~~~~g~~v~iaG~V~~i~~~~TKkG~~mafltleD~~g~~e~~iFP 1033 (1033)
T Consensus 869 pl~~y~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~~~~~~ik~irtk~g~~maf~~~~d~~~~~~~t~f~ 939 (971)
T PRK05898 869 NYANYKNEIDYNELKYTIKDIKEIELKNTNYETNIFAQVYEIKQSKTKNGNLSFYLETLINNKKKTITIFQ 939 (971)
T ss_pred CHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEEEEEEEEEEEECCCCCEEEEEEEECCCCCEEEEECC
T ss_conf 77999999987665530125661444245750488878612577862577536899986378736899785