HHsearch alignment for GI: peg_753 and conserved domain: PRK06920
>PRK06920 dnaE DNA polymerase III DnaE; Reviewed.
Probab=100.00 E-value=0 Score=2449.83 Aligned_cols=980 Identities=38% Similarity=0.678 Sum_probs=934.8
Q ss_pred CCHHHHHHCHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCC
Q ss_conf 81334331444764432998999999997899889981165177499999999976996389999998547664334456
Q 537021.9.peg.7 10 SFVHLQVHSSYSLLEGALSLNNILDKIAADQQPAIAITDTNNLFSALEFSQKACAAGIQPIIGCQLDIDMQDNLKMTNQG 89 (1033)
Q Consensus 10 ~FvhLh~hS~ySlldg~~~~e~LV~~A~~~G~~AiAITD~~nl~Gav~F~~ackk~gIKPIiG~E~~v~~~~~~~~~~~~ 89 (1033)
T Consensus 2 ~FvhLh~hS~ySlLdg~~~i~eLv~~A~e~G~~AlALTDh~~l~Gav~Fy~a~kk~gIKPIiG~e~~v~~~~~------- 74 (1107)
T PRK06920 2 KFVHLQCQTVYSLLKSACKIDELVVRAKELGYSSLAITDENVMYGVIPFYKACKKHGIKPIIGLTASIFSEEE------- 74 (1107)
T ss_pred CCCCCCCCCCCCHHCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCC-------
T ss_conf 2626363672812050759999999999759999999608848789999999997799803542799843897-------
Q ss_pred CCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHCCCHHHHHH
Q ss_conf 56666775399995696899999999989973248778740078999863489889981976796788887799789999
Q 537021.9.peg.7 90 KTPFPTVPSIVLLVSTAEGYQRLIELVSRMYLLDQGKQSVRICLSWLQEIGTEGLIMLTGGSSGPIDRAFFFNSSQVAEK 169 (1033)
Q Consensus 90 ~~~~~~~~~lvlLAkN~~Gy~nL~kL~S~a~~~~~~~~~p~i~~~~L~e~~~egLIvlsg~~~g~i~~~l~~~~~~~a~~ 169 (1033)
T Consensus 75 ----~~~~~LiLLAkN~~GY~nL~kLsS~~~~~~----~~~i~~~~L~~-~~~gLi~ls~~~~g~i~~~l~~~~~~~a~~ 145 (1107)
T PRK06920 75 ----EKSYPLVLLAENEIGYQNLLKISSSIMTKS----KEGIPKKWLAH-YAKGLIAISPGKDGEIEQLLLEDKEEQAEE 145 (1107)
T ss_pred ----CCCCCEEEEECCHHHHHHHHHHHHHHHHCC----CCCCCHHHHHH-HCCCCEEEECCCCCHHHHHHHCCCHHHHHH
T ss_conf ----775787999349999999999999998658----99989999997-479979982886587999984699999999
Q ss_pred HHHHHHHHCCCCEEEEEECCCHH-HHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 99999876598689999439911-58999999999998189899808830078788999987668846985765310024
Q 537021.9.peg.7 170 RLLTFKKLFGDRLYVNLQRHRGY-DRYRESQVVQLAYTHELPLVATNNSLFLSEEDYEAHDVLMAVAHSTVVSQKDRPRV 248 (1033)
Q Consensus 170 ~l~~l~~~Fgd~~ylEl~~~~~~-e~~~~~~l~~lA~~~~iPlVaTndv~Y~~~~D~~~h~iL~aI~~~~~l~~~~~~~~ 248 (1033)
T Consensus 146 ~~~~~~~iFg-~~~~~l~~~~~~~~~~~~~~l~~la~~~~iplVATndvhYl~~eD~~~~dvL~~I~~g~~l~d~~~~~~ 224 (1107)
T PRK06920 146 VARAYQNMFG-NFYMSLQHHAIQDELLLQEKLPEFSNRVNIPVVATNDVRYINQSDALVHECLLSVESGTKMTDPDRPRL 224 (1107)
T ss_pred HHHHHHHHHC-CCEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 9999999738-747999968985459999999999998498989968865478626999999999976996587860115
Q ss_pred -CCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
Q ss_conf -5343234347887512203589987886411100013322102345557568877689889998765410342012464
Q 537021.9.peg.7 249 -TPDHYLKNRSEMVSIFSDLPEALENTVEIARRCSFILQVHAPILPRFIEKECDDIQKEEENELRNKAVAGLEVRLAQGA 327 (1033)
Q Consensus 249 -~~~~yLks~eEM~~~f~~~peAi~NT~~IAe~c~~~l~~~~~~lP~f~~p~~~~~~~~~~~~Lr~l~~~Gl~~R~~~~~ 327 (1033)
T Consensus 225 ~~~e~ylks~~EM~~lf~~~peal~NT~~IAerC~~~l~~~~~~lP~f~~p~g----~t~~~~Lr~l~~~Gl~~Ry~~-- 298 (1107)
T PRK06920 225 KTDQYYLKSSDEMEALFSHVPEAIYNTVEIAERCRVEIPFHVNQLPKFPVPSN----ETADDYLRRVCEEGLQKRYGT-- 298 (1107)
T ss_pred CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC----CCHHHHHHHHHHHHHHHCCCC--
T ss_conf 88102389999999885115999999999997521011248876877779998----778999999999656640379--
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCHHHHH
Q ss_conf 32457838999998877898986063055788899999851047643344442046677655440375633323105676
Q 537021.9.peg.7 328 IAKGYHAQDYRQRLDFELNVIARMKFSGYFLIVADFIQWAKKNNIPVGPGRGSGAGSVTAYALTITDIDPLRFSLLFERF 407 (1033)
Q Consensus 328 ~~~~~~~~~y~~RLe~EL~vI~~~gf~~YFLiV~Div~~ak~~gI~vGpGRGSAagSLVaY~LgIT~VDPi~~~LlFERF 407 (1033)
T Consensus 299 -----~~~~y~~RL~~EL~vI~~mgf~~YFLIV~D~i~~Ak~~~I~vGPGRGSAAGSLVaY~LgIT~VDPi~y~LLFERF 373 (1107)
T PRK06920 299 -----PKEVHINRLNHELNVISRMGFSDYFLIVWDFMKYAHENHILTGPGRGSAAGSLVAYVLEITDIDPIEYDLLFERF 373 (1107)
T ss_pred -----CCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHH
T ss_conf -----959999999999999986488878742999999998779413688873588899998568033841258739986
Q ss_pred HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCC
Q ss_conf 21001457875333656878999999983038021554220778778899999997527998898865431014589824
Q 537021.9.peg.7 408 LNPDRMSMPDFDIDFCQDRRDEVIRYVQNKYGHERVAQIITFGSLQAKAALRDVGRALQMPYSQVDRLCKLIPNDPAHPV 487 (1033)
Q Consensus 408 Lnp~R~~~PDIDiDf~~~~R~~vi~y~~~kyG~~~va~i~t~~t~~~k~aird~~r~~g~~~~~~~~~~~~i~~~~~~~~ 487 (1033)
T Consensus 374 LNpeR~smPDIDiDf~~~rR~eVi~Yv~~kYG~~~VAqI~Tf~t~~ak~aiRDv~Rvlg~~~~~~d~iak~ip~~~g~tl 453 (1107)
T PRK06920 374 LNPERVTLPDIDIDFPDTRRDEMIRYVKDKYGQLRVAQIVTFGTLAAKAAIRDIARVMGLPPRDIDIFSKLIPSKLGITL 453 (1107)
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCH
T ss_conf 58877888887877650129999999999866675897500241498899999988708998999998732788788887
Q ss_pred CHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHEECCCCCCCCCEEEEEECHHHHHHC
Q ss_conf 43445229887886430742026889872011221002447440335256666620012367688668851021334311
Q 537021.9.peg.7 488 SLQAIADDSRFREARLADPSVDRLLEISQKLEGLYRHASTHAAGIVIGDRPLSQLVPMYRDVRSDLPVTQFNMKWIEKAG 567 (1033)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~leg~~r~~~~Ha~Gvvi~~~~l~~~~p~~~~~~~~~~~~q~d~~~~e~~g 567 (1033)
T Consensus 454 ~-~a~~~~~~l~~~~~~~~~~~~l~~~A~~lEGlpR~~s~HAaGvVIs~~pL~~~vPl~~~~-~~~~vtQ~d~~~~E~~G 531 (1107)
T PRK06920 454 K-EAYEESQSLREFIQGNLLHERVFEIAKRVEGLPRHTSIHAAGVIMSQEPLTGSVAIQEGH-NDVYVTQYPADALEELG 531 (1107)
T ss_pred H-HHHHHCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCEEECC-CCCEEEEEECCCHHHCC
T ss_conf 9-999857557776634978899999999964984544456773363176755346514679-99657764430357509
Q ss_pred CCHHHHHHHCCHHHHHHHHHHHHH-HCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 232135654178999999998874-0254343323443588998762014101221145347888877174048888766
Q 537021.9.peg.7 568 LIKFDFLGLKTLTLLQKSLDFLAQ-RGVKVDLSLIPFDDHETYHLLTTKGTLGIFQLESSGMRQALEGMQPDCIEDIIAL 646 (1033)
Q Consensus 568 l~K~D~Lgl~~L~~i~~~~~~i~~-~~~~~d~~~ip~~D~~~~~l~~~g~t~GvFQ~es~~~~~~l~~~~p~~~~dl~~~ 646 (1033)
T Consensus 532 LlK~DfLGLr~Ltvi~~a~~~I~~~~~~~id~~~ipldD~~t~~ll~~g~T~GvFQ~ES~g~~~~l~~~~P~~f~diva~ 611 (1107)
T PRK06920 532 LLKMDFLGLRNLTLLENIIKFIEKKTGKEIDIRNLPLQDEKTFQLLGRGDTTGVFQLESGGMRNVLRGLKPNEFEDIVAV 611 (1107)
T ss_pred CCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHH
T ss_conf 80034434772899999999999833997671307845499999985778777074557579999986599989996763
Q ss_pred HHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHH
Q ss_conf 54114113420036888504657850269667334103355300125689887886326841307889762012110167
Q 537021.9.peg.7 647 VSLYRPGPIDNIVVYNNRKNGKEKIVSIHPLIDPMLKETQGVIIYQEQVMQIAQLLSGYSLSEADVLRRAMGKKIKEEMD 726 (1033)
Q Consensus 647 ~al~RPGp~~~~~~yi~rk~g~e~~~~~hp~l~~iL~~T~Gv~vyQEQvm~ia~~~ag~~~~ead~lRra~~kk~~~~~~ 726 (1033)
T Consensus 612 ~aL~RPGP~~~i~~yi~rk~g~~~~~y~hp~l~~iL~~TyGvivyQEQvM~ia~~~agfs~~eaD~lRram~KK~~~~m~ 691 (1107)
T PRK06920 612 NSLYRPGPMEQIPTFIESKHGRRKIEYLHPDLKPILERTYGVIVYQEQIMQIASKLAGFSLGEADLLRRAVSKKNRDILD 691 (1107)
T ss_pred EEEECCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHH
T ss_conf 00205775200169999708997888899779998742477487799999989987369867899999984437588899
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
Q ss_conf 78789999986249999999999999997500013310147888999999999973026667775100235420258999
Q 537021.9.peg.7 727 KQKERFISGASKNGISKTIAVNIFELLAKFADYGFNKSHAAAYAVISYQTAWMKTHYPVEFLAASMTLEMDNVEKIKKFC 806 (1033)
Q Consensus 727 ~~~~~f~~g~~~~g~~~~~a~~i~~~i~~f~~Y~FnksHa~aya~~~y~~aylK~~yP~eF~aa~L~~~~~~~~~~~~~i 806 (1033)
T Consensus 692 ~~~~~F~~g~~~~g~~~~~a~~i~~~i~~Fa~YgFnkSHa~aYa~iay~~AyLK~hyP~eF~aalL~~~~~~~~k~~~~i 771 (1107)
T PRK06920 692 QERKHFVQGCLKNGYDETSAEKIYDLIVRFANYGFNRSHAVAYSMIGYQLAYLKANYPLEFMTALLSSAIGNEDKIVQYI 771 (1107)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 99999986676659999999999999998751287878999999999999999875759999999764468856799999
Q ss_pred HHHHHCCCCCCCCCCCCCCEEEEECCCEEEEEHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHH
Q ss_conf 88886368503552334210035319869850268589698999999999837999997899973482479989999888
Q 537021.9.peg.7 807 QDARQFNIQIMPPSVNTPCVDFKVGDNRIYYSLAAIKGVGTTTARHIMEASADKPFDSLEDFCSRVDSKKLNRRVLESLV 886 (1033)
Q Consensus 807 ~e~~~~gi~vl~PdIN~S~~~f~~~~~~Ir~Gl~~Ikgvg~~~~~~Ive~r~~g~f~sl~df~~rv~~~~~nk~~le~Li 886 (1033)
T Consensus 772 ~e~~~~gi~vlppdin~S~~~f~~~~~~Ir~gl~~ikgvg~~~~~~Iv~~R~~~~f~~l~Df~~Rv~~~~~~~~~le~Li 851 (1107)
T PRK06920 772 RETKRKGFHVLPPSLQRSGYNFQIEGNAIRYSLLSIRNIGMATVTALYEEREKKPFEDLFEFCLRMPSKFVTERNLEAFV 851 (1107)
T ss_pred HHHHHCCCCCCCCEEEECCCCEEEECCEEEEHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHH
T ss_conf 99998699514973442388508878906636556456669999999999964899998999985465448999999999
Q ss_pred HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCEEECCC
Q ss_conf 67672347903899999899999999988654312777866665555655776668999988899985788726211638
Q 537021.9.peg.7 887 FAGALDCFGYSRMQLLQSLDNIQKYAQWVEKNRTNKHENIFAHEKGTFSDKITLEKFSVENSSVRFENEQRVLGFYFSGH 966 (1033)
Q Consensus 887 ~aGAfD~~~~~R~~ll~~i~~~~~~~~~~~~~~~~~q~~LF~~~~~~~~~~~~~~~~~~~~~~e~l~~E~e~LGf~lS~H 966 (1033)
T Consensus 852 ~aGAfD~~g~~R~~l~~~l~~~~~~~~~------------~~~~~~-~~~~~~~~~~~~~~~~e~l~~Eke~lG~yls~H 918 (1107)
T PRK06920 852 WSGCFDDFGVSRTNLWASLKGALEYANL------------ARDLGD-AVPKSKYVQGEELSFIEQLNKEKEALGFYLSSY 918 (1107)
T ss_pred HCCCCHHHCCCHHHHHHHHHHHHHHHHH------------CCCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHEEEEECCC
T ss_conf 7786200164899999979987500433------------136632-347777778899986889997687573321527
Q ss_pred CHHHHHHHHHHCCCCCHHHHHCCCCCCEEEEEEEEEEEEEECCCCCCEEEEEEEECCCCEEEEEECC
Q ss_conf 5589999998748976889850558988999999961121015888769999998497049999539
Q 537021.9.peg.7 967 PLDVYKPILRKMGIKGYEESVATIRGNNIRLAAMVVSKQQKKTRKGSRIGWVTFSEPAKEYEANFFP 1033 (1033)
Q Consensus 967 Pl~~~~~~l~~~~~~~~~~~~~~~~g~~v~iaG~V~~i~~~~TKkG~~mafltleD~~g~~e~~iFP 1033 (1033)
T Consensus 919 Pl~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~g~i~~~~~~~tk~g~~maf~~leD~tg~~e~vvFp 984 (1107)
T PRK06920 919 PTAQYRKLLKELEIPSLAQAMRH-KKKVQRAIVYITSVKVIRTKKGQKMAFITFCDQNDEMEAVVFP 984 (1107)
T ss_pred HHHHHHHHHHHCCCCCHHHHHHC-CCCEEEEEEEEEEEEEEECCCCCEEEEEEEEECCCCEEEEECH
T ss_conf 29899999987489779999746-8988999999988898636889969999999799868999997