HHsearch alignment for GI: peg_753 and conserved domain: cd04483
>cd04483 hOBFC1_like hOBFC1_like: A subfamily of OB folds similar to that found in human OB fold containing protein 1 (hOBFC1). Members of this group belong to the Replication protein A subunit 2 (RPA2) family of OB folds. RPA is a nuclear ssDNA binding protein (SSB) which appears to be involved in all aspects of DNA metabolism including replication, recombination, and repair. RPA also mediates specific interactions of various nuclear proteins. In animals, plants, and fungi, RPA is a heterotrimer with subunits of 70KDa (RPA1), 32kDa (RPA2), and 14 KDa (RPA3). The OB fold domain of RPA2 has dual roles in ssDNA binding and trimerization.
Probab=90.73 E-value=0.58 Score=26.64 Aligned_cols=32 Identities=9% Similarity=0.131 Sum_probs=27.9
Q ss_pred EEEEEEEEEEECCCCCCEEEEEEEECCCCEEEEEECC
Q ss_conf 9999961121015888769999998497049999539
Q 537021.9.peg.7 997 LAAMVVSKQQKKTRKGSRIGWVTFSEPAKEYEANFFP 1033 (1033)
Q Consensus 997 iaG~V~~i~~~~TKkG~~mafltleD~~g~~e~~iFP 1033 (1033)
T Consensus 2 IlG~VVs~~ere-----~f~~y~vDDgTGcI~Cv~W~ 33 (92)
T cd04483 2 ILGTVVSRRERE-----TFYSFGVDDGTGVVNCVCWK 33 (92)
T ss_pred EEEEEEEEEEEC-----CEEEEEEECCCCEEEEEEEE
T ss_conf 379999997605-----71699860898669989960