BLAST/PSIBLAST alignment of GI: peg_753 and GI: 116251489 at iteration 1
>gi|116251489|ref|YP_767327.1| DNA polymerase III subunit alpha [Rhizobium leguminosarum bv. viciae 3841] Length = 1165
>gi|115256137|emb|CAK07218.1| putative DNA polymerase III alpha subunit [Rhizobium leguminosarum bv. viciae 3841] Length = 1165
Score = 1351 bits (3496), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 642/1031 (62%), Positives = 808/1031 (78%), Gaps = 6/1031 (0%)
Query: 8 SPSFVHLQVHSSYSLLEGALSLNNILDKIAADQQPAIAITDTNNLFSALEFSQKACAAGI 67
+P F+HL+VHS+YSLLEGAL L IL K D QPAIAITDTNNLF ALEFSQKA G+
Sbjct: 16 TPGFIHLRVHSAYSLLEGALPLKKILYKATGDSQPAIAITDTNNLFVALEFSQKAMEDGL 75
Query: 68 QPIIGCQLDIDMQDNLKMTNQG-KTPFPTVPSIVLLVSTAEGYQRLIELVSRMYLLDQGK 126
QPIIGCQ+ IDM+D L+ +G + +PSIVLL +T GY+RL++LVSR YL +
Sbjct: 76 QPIIGCQVSIDMEDGLETEKRGGQQALVKLPSIVLLAATDAGYERLVDLVSRAYLGGESN 135
Query: 127 QSVRICLSWLQEIGTEGLIMLTGGSSGPIDRAFFFNSSQVAEKRLLTFKKLFGDRLYVNL 186
Q+V I SWL+E GTEGLI L+G +GP+D A AE RLLT K+LFGDRLYV L
Sbjct: 136 QAVHISASWLEEAGTEGLIALSGALTGPVDVAIKEGHPTQAEARLLTLKRLFGDRLYVEL 195
Query: 187 QRHRGYDRYRESQVVQLAYTHELPLVATNNSLFLSEEDYEAHDVLMAVAHSTVVSQKDRP 246
QRH YD+ E +++ LAY H+LPLVATN + F + +DY+AHD LMAVAH+ +VS R
Sbjct: 196 QRHGTYDKRHEQKIIGLAYAHDLPLVATNEAFFPTRDDYDAHDALMAVAHNAIVSDDSRF 255
Query: 247 RVTPDHYLKNRSEMVSIFSDLPEALENTVEIARRCSFILQVHAPILPRFIEKECDDIQKE 306
R+TPDHYLK+R+EMV +F+DLPEALENT+EIA RCSF+L+ PILPRF D + E
Sbjct: 256 RLTPDHYLKSRAEMVKLFADLPEALENTIEIATRCSFVLKTRKPILPRFTGATDDAEEAE 315
Query: 307 EENE--LRNKAVAGLEVRLAQGAIAKGYHAQDYRQRLDFELNVIARMKFSGYFLIVADFI 364
LR +AV GL++RL+ ++ GY +DYR+RLDFEL+VI RM+F GYFLIVADFI
Sbjct: 316 RAEASELRRQAVEGLDMRLSTLGMSPGYEEKDYRERLDFELSVIERMRFPGYFLIVADFI 375
Query: 365 QWAKKNNIPVGPGRGSGAGSVTAYALTITDIDPLRFSLLFERFLNPDRMSMPDFDIDFCQ 424
+WAK+++IPVGPGRGSGAGS+ AYALTITD+DPLRFSLLFERFLNP+R+SMPDFDIDFCQ
Sbjct: 376 KWAKQHDIPVGPGRGSGAGSLVAYALTITDVDPLRFSLLFERFLNPERVSMPDFDIDFCQ 435
Query: 425 DRRDEVIRYVQNKYGHERVAQIITFGSLQAKAALRDVGRALQMPYSQVDRLCKLIPNDPA 484
DRR+EVIRYVQ KYG E+VAQIITFGSLQA+AALRDVGR L+MPY QVD++CKL+PN+PA
Sbjct: 436 DRREEVIRYVQAKYGREQVAQIITFGSLQARAALRDVGRVLEMPYGQVDKICKLVPNNPA 495
Query: 485 HPVSL-QAIADDSRFREARLADPSVDRLLEISQKLEGLYRHASTHAAGIVIGDRPLSQLV 543
+P L +AI ++ + +E +P V RLL+I+QK+EGLYRHASTHAAGIVIGDRPLS+LV
Sbjct: 496 NPTPLSKAIEEEPKLQEEAAKEPVVARLLDIAQKIEGLYRHASTHAAGIVIGDRPLSKLV 555
Query: 544 PMYRDVRSDLPVTQFNMKWIEKAGLIKFDFLGLKTLTLLQKSLDFLAQRGVKVDLSLIPF 603
PMYRD RSD+PVTQFNMKW+E+AGL+KFDFLGLKTLT+L+ ++DF+A+ G+K+DL+ IP
Sbjct: 556 PMYRDPRSDMPVTQFNMKWVEQAGLVKFDFLGLKTLTVLKVAVDFVAKLGIKIDLAAIPL 615
Query: 604 DDHETYHLLTTKGTLGIFQLESSGMRQALEGMQPDCIEDIIALVSLYRPGPIDNIVVYNN 663
DD +TY +L+ T+G+FQ+ES+GMR+AL GM+PDCIEDIIALV+LYRPGP++NI YN
Sbjct: 616 DDKKTYEMLSRGETVGVFQVESAGMRKALIGMKPDCIEDIIALVALYRPGPMENIPTYNA 675
Query: 664 RKNGKEKIVSIHPLIDPMLKETQGVIIYQEQVMQIAQLLSGYSLSEADVLRRAMGKKIKE 723
RK+G E++ SIHP+ID +LKETQGVI+YQEQVMQIAQ+LSGYSL EAD+LRRAMGKKIK
Sbjct: 676 RKHGDEELESIHPMIDHLLKETQGVIVYQEQVMQIAQVLSGYSLGEADLLRRAMGKKIKA 735
Query: 724 EMDKQKERFISGASKNGISKTIAVNIFELLAKFADYGFNKSHAAAYAVISYQTAWMKTHY 783
EMD+Q+ERF+ GA KNG+SK A NIFELLAKFA+YGFNKSHAAAYA++SYQTA+MK HY
Sbjct: 736 EMDQQRERFVVGAVKNGVSKPQADNIFELLAKFANYGFNKSHAAAYAIVSYQTAYMKAHY 795
Query: 784 PVEFLAASMTLEMDNVEKIKKFCQDARQFNIQIMPPSVNTPCVDFKVGDNRIYYSLAAIK 843
PVEFLAASMTL+M N EK+ F QDA++ I+++ PSV T F+ GDNRIYY+LAA+K
Sbjct: 796 PVEFLAASMTLDMSNTEKVNDFRQDAKRLGIEVIAPSVQTSFRHFETGDNRIYYALAALK 855
Query: 844 GVGTTTARHIMEASADKPFDSLEDFCSRVDSKKLNRRVLESLVFAGALDCFGYSRMQLLQ 903
GVG + HI+E DKPF S+EDFC R+D +++NRRVLESL++AGA DCF R QL
Sbjct: 856 GVGESAVDHIVEVRGDKPFASIEDFCLRIDPRQVNRRVLESLIYAGAFDCFDMDRAQLAA 915
Query: 904 SLDNIQKYAQWVEKNRTNKHENIFAHEKGTFSDKITLEKFSVENSSVRFENEQRVLGFYF 963
LD + YAQ ++N+ + +IF + +KI+L FS S R E +VLGFY
Sbjct: 916 GLDRVLGYAQRAQENKLSGQSDIFGSTLTSGPEKISLPPFSPWLPSERLLKEFQVLGFYL 975
Query: 964 SGHPLDVYKPILRKMGIKGYEESVATIR--GNNIRLAAMVVSKQQKKTRKGSRIGWVTFS 1021
+ HPLD Y IL+KM ++ + E A I+ N RLA V+SKQ++KTR G+++G + FS
Sbjct: 976 TAHPLDSYNNILQKMRVQTFAEFSAAIKQGAANARLAGTVISKQERKTRTGNKMGIIVFS 1035
Query: 1022 EPAKEYEANFF 1032
+ + ++EA F
Sbjct: 1036 DSSGQFEAVLF 1046