PSIBLAST alignment of GI: peg_753 and protein with PDB id: 2hpi
gi|116667773|pdb|2HPI|A Chain A, Eubacterial And Eukaryotic Replicative Dna Polymerases Are Not Homologous: X-Ray Structure Of Dna Polymerase Iii Length = 1220
>gi|116667774|pdb|2HPM|A Chain A, Eubacterial And Eukaryotic Replicative Dna Polymerases Are Not Homologous: X-Ray Structure Of Dna Polymerase Iii Length = 1220
Score = 740 bits (1911), Expect = 0.0, Method: Composition-based stats.
Identities = 421/1096 (38%), Positives = 602/1096 (54%), Gaps = 82/1096 (7%)
Query: 5 LEKSPSFVHLQVHSSYSLLEGALSLNNILDKIAA----DQQPAIAITDTNNLFSALEFSQ 60
+ F HL H+ +SLL+GA L ++L + D PA+A+TD NLF A+EF +
Sbjct: 1 MGSKLKFAHLHQHTQFSLLDGAAKLQDLLKWVKETTPED--PALAMTDHGNLFGAVEFYK 58
Query: 61 KACAAGIQPIIGCQLDIDMQDNLKMTNQGKTPFPTVPSIVLLVSTAEGYQRLIELVSRMY 120
KA A G++PIIG + + + +GK + LL GYQ L+ L SR Y
Sbjct: 59 KATAMGVKPIIGYEAYVAAESRFDR-KRGKGLDGGYFHLTLLAKDFTGYQNLVRLASRAY 117
Query: 121 LLDQGKQSVRICLSWLQEIGTEGLIMLTGGSSGPIDRAFFFNSSQVAEKRLLTFKKLFGD 180
L + + RI L+E +GLI L+G I + + +AE RL +FGD
Sbjct: 118 L-EGFYEKPRIDREILRE-HAQGLIALSGCLGAEIPQFILQDRLDLAEARLNEDLSIFGD 175
Query: 181 RLYVNLQRHRGYDRYRESQVV-QLAYTHELPLVATNNSLFLSEEDYEAHDVLMAVAHSTV 239
R ++ +Q H ++ + +QV+ + A + L +VATN+ ++ +ED AH+VL+A+ T
Sbjct: 176 RFFIEIQNHGLPEQKKVNQVLKEFARKYGLGMVATNDGHYVRKEDARAHEVLLAIQSKTT 235
Query: 240 VSQKDRPRVTPDHYLKNRSEMVSIF----SDLPEALENTVEIARRCSFILQVHAPILPRF 295
+ +R R D + E + E +NTVEIAR C L + ++ R
Sbjct: 236 LDDPERWRFPCDEFYVKTPEEMRAMLPEAEWGDEPFDNTVEIARMCDVDLPIGDKMVYRI 295
Query: 296 IEKECDDIQKEEENELRNKAVAGLEVRLAQGAIAKGYHA--------------------- 334
+ + E LR GL R Y
Sbjct: 296 -PRFPLPEGRTEAQYLRELTFLGLLRRYPDRITEAFYREVLRLLGTMPPHGDERALAEAL 354
Query: 335 --------------------------QDYRQRLDFELNVIARMKFSGYFLIVADFIQWAK 368
+ R +EL+VI RM F GYFLIV D+I WA+
Sbjct: 355 ARVEEKAWEELRKRLPPLEGVREWTAEAILHRALYELSVIERMGFPGYFLIVQDYINWAR 414
Query: 369 KNNIPVGPGRGSGAGSVTAYALTITDIDPLRFSLLFERFLNPDRMSMPDFDIDFCQDRRD 428
+ + VGPGRGS AGS+ AYA+ IT+IDPLRF LLFERFLNP+R+SMPD D DF RD
Sbjct: 415 GHGVSVGPGRGSAAGSLVAYAVGITNIDPLRFGLLFERFLNPERVSMPDIDTDFSDRERD 474
Query: 429 EVIRYVQNKYGHERVAQIITFGSLQAKAALRDVGRALQMPYSQVDRLCKLIPNDPAHPVS 488
VI+YV+ +YG ++VAQI TFGSL +KAAL+DV R +P+ + + L KLIP P
Sbjct: 475 RVIQYVRERYGEDKVAQIGTFGSLASKAALKDVARVYGIPHKKAEELAKLIPVQFGKPKP 534
Query: 489 -LQAIADDSRFREARLADPSVDRLLEISQKLEGLYRHASTHAAGIVIGDRPLSQLVPMYR 547
+AI R D + +++E++ +LEGL RHAS HAAG+VI PL+ LVP+ R
Sbjct: 535 LQEAIQVVPELRAEMEKDERIRQVIEVAMRLEGLNRHASVHAAGVVIAAEPLTDLVPLMR 594
Query: 548 DVRSDLPVTQFNMKWIEKAGLIKFDFLGLKTLTLLQKSLDFLAQ-RGVKVDLSLIPFDDH 606
D + PVTQ++M +E GL+K DFLGL+TLT L ++ + + +GV++D +P DD
Sbjct: 595 D-QEGRPVTQYDMGAVEALGLLKMDFLGLRTLTFLDEARRIVKESKGVELDYDRLPLDDP 653
Query: 607 ETYHLLTTKGTLGIFQLESSGMRQALEGMQPDCIEDIIALVSLYRPGPIDNIVVYNNRKN 666
+T+ LL+ T G+FQLES GM + G++P +EDIIALVSLYRPGP+++I Y R +
Sbjct: 654 KTFELLSRGETKGVFQLESGGMTATVRGLKPRRLEDIIALVSLYRPGPMEHIPTYIRRHH 713
Query: 667 GKEKIVS---IHPL--IDPMLKETQGVIIYQEQVMQIAQLLSGYSLSEADVLRRAMGKKI 721
G+E + H + P+L ET G+ +YQEQ+MQIA ++GYSL EAD+LRRAMGKK
Sbjct: 714 GQEPVSYAEFPHAEKYLRPILDETYGIPVYQEQIMQIASQVAGYSLGEADLLRRAMGKKR 773
Query: 722 KEEMDKQKERFISGASKNGISKTIAVNIFELLAKFADYGFNKSHAAAYAVISYQTAWMKT 781
EEM K +ERF+ GA + G+ + A +F++L FA+YGFNKSHAAAY+++SYQTA++K
Sbjct: 774 VEEMQKHRERFVRGAKERGVPEEEANRLFDMLEAFANYGFNKSHAAAYSLLSYQTAYVKA 833
Query: 782 HYPVEFLAASMTLEMDNVEKIKKFCQDARQFNIQIMPPSVNTPCVDFKVGDNRIYYSLAA 841
HYPVEF+AA +++E + +K+ ++ +DAR I ++PP VN DFKV I + L+A
Sbjct: 834 HYPVEFMAALLSVERHDSDKVAEYIRDARALGIPVLPPDVNRSGFDFKVVGEEILFGLSA 893
Query: 842 IKGVGTTTARHIMEASA-DKPFDSLEDFCSRVDSKKLNRRVLESLVFAGALDCFGYSRMQ 900
+K VG AR I+E PF SL DF R+ + +N+R LESLV AGALD FG R +
Sbjct: 894 VKNVGEMAARAILEERERGGPFKSLGDFLKRLPEQVVNKRALESLVKAGALDAFG-DRAR 952
Query: 901 LLQSLDNIQKYAQWVEKNRTNKHENIFAHEKGTFSDKITLEKFSVENSSVRFENEQRVLG 960
LL SL+ + ++A + + +FA + + L + S + E+ LG
Sbjct: 953 LLASLEPLLRWAAETRERGRSGLVGLFAEVE-----EPPLVEASPLDEITMLRYEKEALG 1007
Query: 961 FYFSGHPLDVYKPILRKMGIKGYEES----VATIRGNNIRLAAMVVSKQQKKTRKGSRIG 1016
Y SGHP+ Y P LR++ EE + L+ MV +K TR G +
Sbjct: 1008 IYVSGHPVLRY-PGLREVASCTIEELSEFVRELPGKPKVLLSGMVEEVVRKPTRSGGMMA 1066
Query: 1017 WVTFSEPAKEYEANFF 1032
T S+ E F
Sbjct: 1067 RFTLSDETGALEVVVF 1082