PSIBLAST alignment of GI: peg_753 and protein with PDB id: 2hqa
>gi|116667785|pdb|2HQA|A Chain A, Crystal Structure Of The Catalytic Alpha Subunit Of E. Coli Replicative Dna Polymerase Iii Length = 917
Score = 612 bits (1579), Expect = e-173, Method: Composition-based stats.
Identities = 393/935 (42%), Positives = 552/935 (59%), Gaps = 37/935 (3%)
Query: 5 LEKSPSFVHLQVHSSYSLLEGALSLNNILDKIAADQQPAIAITDTNNLFSALEFSQKACA 64
+ + P FVHL+VHS YS ++G ++ K AA PA+AITD NL ++F
Sbjct: 1 MSE-PRFVHLRVHSDYSXIDGLAKTAPLVKKAAALGXPALAITDFTNLCGLVKFYGAGHG 59
Query: 65 AGIQPIIGCQLDIDMQDNLKMTNQGKTPFPTVPSIVLLVSTAEGYQRLIELVSRMYLLDQ 124
AGI+PI+G ++ Q + + +L + GYQ L L+S+ Y
Sbjct: 60 AGIKPIVGADFNV----------QCDLLGDELTHLTVLAANNTGYQNLTLLISKAYQRGY 109
Query: 125 GKQSVRICLSWLQEIGTEGLIMLTGGSSGPIDRAFFFNSSQVAEKRLLTFKKLFGDRLYV 184
G I WL E+ EGLI+L+GG G + R+ +S + ++ + +++ F DR ++
Sbjct: 110 GAAGPIIDRDWLIEL-NEGLILLSGGRXGDVGRSLLRGNSALVDECVAFYEEHFPDRYFL 168
Query: 185 NLQRHRGYDRY-RESQVVQLAYTHELPLVATNNSLFLSEEDYEAHDVLMAVAHSTVVSQK 243
L R D V+LA LP+VATN+ F+ D++AH++ +A+ +
Sbjct: 169 ELIRTGRPDEESYLHAAVELAEARGLPVVATNDVRFIDSSDFDAHEIRVAIHDGFTLDDP 228
Query: 244 DRPR-VTPDHYLKNRSEMVSIFSDLPEALENTVEIARRCSFILQVHAPILPRFIEKECDD 302
RPR +P Y ++ E +F+D+PEAL NTVEIA+RC+ +++ + +
Sbjct: 229 KRPRNYSPQQYXRSEEEXCELFADIPEALANTVEIAKRCNVTVRLGE-----YFLPQFPT 283
Query: 303 IQKEEENELRNKAVAGLEVRLA---QGAIAKGYHAQDYRQRLDFELNVIARMKFSGYFLI 359
E+ L +A GLE RLA + +Y +RL+ EL VI + F GYFLI
Sbjct: 284 GDXSTEDYLVKRAKEGLEERLAFLFPDEEERLKRRPEYDERLETELQVINQXGFPGYFLI 343
Query: 360 VADFIQWAKKNNIPVGPGRGSGAGSVTAYALTITDIDPLRFSLLFERFLNPDRMSMPDFD 419
V +FIQW+K N +PVGPGRGSGAGS+ AYAL ITD+DPL F LLFERFLNP+R+S PDFD
Sbjct: 344 VXEFIQWSKDNGVPVGPGRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSXPDFD 403
Query: 420 IDFCQDRRDEVIRYVQNKYGHERVAQIITFGSLQAKAALRDVGRALQMPYSQVDRLCKLI 479
+DFC ++RD+VI +V + YG + V+QIITFG+ AKA +RDVGR L PY VDR+ KLI
Sbjct: 404 VDFCXEKRDQVIEHVADXYGRDAVSQIITFGTXAAKAVIRDVGRVLGHPYGFVDRISKLI 463
Query: 480 PNDPAHPVSLQAIADDSRFREARLADPSVDRLLEISQKLEGLYRHASTHAAGIVIGDRPL 539
P DP + +A + + E AD V L++ ++KLEG+ R+A HA G+VI +
Sbjct: 464 PPDPGXTL-AKAFEAEPQLPEIYEADEEVKALIDXARKLEGVTRNAGKHAGGVVIAPTKI 522
Query: 540 SQLVPMYRDVRSDLPVTQFNMKWIEKAGLIKFDFLGLKTLTLLQKSLDFLAQRGVKV--- 596
+ P+Y D PVTQF+ +E AGL+KFDFLGL+TLT++ +L+ + +R K
Sbjct: 523 TDFAPLYCDEEGKHPVTQFDKSDVEYAGLVKFDFLGLRTLTIINWALEXINKRRAKNGEP 582
Query: 597 --DLSLIPFDDHETYHLLTTKGTLGIFQLESSGMRQALEGMQPDCIEDIIALVSLYRPGP 654
D++ IP DD +++ L T +FQLES G + ++ +QPDC ED IALV+L+RPGP
Sbjct: 583 PLDIAAIPLDDKKSFDXLQRSETTAVFQLESRGXKDLIKRLQPDCFEDXIALVALFRPGP 642
Query: 655 ID--NIVVYNNRKNGKEKIVS-----IHPLIDPMLKETQGVIIYQEQVMQIAQLLSGYSL 707
+ + + +RK+G+E+I H + P+L+ T G+I+YQEQV QIAQ+LSGY+L
Sbjct: 643 LQSGXVDNFIDRKHGREEISYPDVQWQHESLKPVLEPTYGIILYQEQVXQIAQVLSGYTL 702
Query: 708 SEADVLRRAMGKKIKEEMDKQKERFISGASKNGISKTIAVNIFELLAKFADYGFNKSHAA 767
AD LRRA GKK EE KQ+ F GA KNGI+ +A IF+L+ KFA YGFNKSH+A
Sbjct: 703 GGADXLRRAXGKKKPEEXAKQRSVFAEGAEKNGINAELAXKIFDLVEKFAGYGFNKSHSA 762
Query: 768 AYAVISYQTAWMKTHYPVEFLAASMTLEMDNVEKIKKFCQDARQFNIQIMPPSVNTPCVD 827
AYA++SYQT W+K HYP EF AA T + DN EK+ + + ++I+PP +N+
Sbjct: 763 AYALVSYQTLWLKAHYPAEFXAAVXTADXDNTEKVVGLVDECWRXGLKILPPDINSGLYH 822
Query: 828 FKVG-DNRIYYSLAAIKGVGTTTARHIMEAS-ADKPFDSLEDFCSRVDSKKLNRRVLESL 885
F V D I Y + AIKGVG I+EA F L D C+R D+KKLNRRVLE L
Sbjct: 823 FHVNDDGEIVYGIGAIKGVGEGPIEAIIEARNKGGYFRELFDLCARTDTKKLNRRVLEKL 882
Query: 886 VFAGALDCFGYSRMQLLQSLDNIQKYAQWVEKNRT 920
+ +GA D G R L SL + K A K
Sbjct: 883 IXSGAFDRLGPHRAALXNSLGDALKAADQHAKAEA 917