RPSBLAST alignment for GI: peg_753 and conserved domain: TIGR01405
>gnl|CDD|162340 TIGR01405, polC_Gram_pos, DNA polymerase III, alpha chain, Gram-positive type. The N-terminal region of about 200 amino acids is rich in low-complexity sequence, poorly alignable, and not included n this model. Length = 1213
Score = 127 bits (321), Expect = 1e-29
Identities = 207/948 (21%), Positives = 339/948 (35%), Gaps = 243/948 (25%)
Query: 78 DMQDNLKMTNQGKTPFPTVPSIVLLVSTAEGYQRLIELVSRMYLLDQGKQSVRICLSWLQ 137
++ + L K P I++ G + L +LVS + L RI S L+
Sbjct: 365 ELNNKLSSEELYKRLRPN--HIIIYAKNQAGLKNLYKLVS-ISLTKYFYTRPRILRSLLK 421
Query: 138 EIGTEGLIMLTGGSSGPIDRAFFFNSSQVAEK--RLLTFKKLFGDRLYVNLQRHRGYDRY 195
+ EGL++ + S G + A E+ + F ++ Y +L R +
Sbjct: 422 KY-REGLLIGSACSEGELFDALLSKPDDELEEIAKRYDFIEIQPPGNYAHLIE-REQVKD 479
Query: 196 RES------QVVQLAYTHELPLVATNNSLFLSEEDYEAHDVLMAV-AHSTVVSQKDRPRV 248
+E+ ++++LA P+VAT + ++ ED +L+A +++ P+
Sbjct: 480 KEALKEIIKKLIELAKELNKPVVATGDVHYIEPEDKIYRKILVASQGLGNPLNRHFNPKE 539
Query: 249 TPDHYLKNRSEMVSIFSDLPEAL------ENTVEIARRCSFILQVHAPILPRFIEKECDD 302
P+ + + +EM+ FS L E ENT +IA + I + + IE
Sbjct: 540 VPELHFRTTNEMLDEFSFLGEEKAYEIVVENTNKIADQIEEIQPIKDKLYTPKIEGA--- 596
Query: 303 IQKEEENELRNKAVAGLEVRLAQGAIAKGYHAQDY----RQRLDFELNVIARMKFSGYFL 358
+ ++R+ AK + QR++ EL I F+ +L
Sbjct: 597 -----DEKIRDLTYEN----------AKKIYGDPLPEIVEQRIEKELKSIIGNGFAVIYL 641
Query: 359 IVADFIQWAKKNNIPVGPGRGSGAGSVTAYALTITDIDPLR------------------- 399
I +Q + ++ VG RGS S+ A IT+++PL
Sbjct: 642 ISQLLVQKSLQDGYLVGS-RGSVGSSLVATMTGITEVNPLPPHYLCPNCKYSEFITDGSV 700
Query: 400 ---FSLL-------------------FERFLNPDRMSMPDFDIDFCQDRRDEVIRYVQNK 437
F L FE FL +PD D++F + + + YV+
Sbjct: 701 GSGFDLPDKDCPKCGAPLKKDGQDIPFETFLGFKGDKVPDIDLNFSGEYQAKAHNYVKEL 760
Query: 438 YGHERVAQIITFGSLQAKAALRDVGRALQMPYSQVDRLCKLIPNDPAHPVSLQAIADDSR 497
+G + + T G++ K A V + + D +
Sbjct: 761 FGEDHTFRAGTIGTVAEKTAYGYVKKYFE---------------------------DQGK 793
Query: 498 FREARLADPSVDRLLEISQKLEGLYRHASTHAAGIVIGDRPLSQLVPMYRDVRSDLPV-- 555
D ++RL Q G+ R H GI+I VP Y DV PV
Sbjct: 794 H----YRDAEIERL---VQGCTGVKRTTGQHPGGIII--------VPKYMDVYDFTPVQY 838
Query: 556 -----------TQFNMKWIEKAGLIKFDFLGLKTLTLLQKSLDFLAQRGVKVDLSLIPFD 604
T F+ I L+K D LG T+++ D +D IP D
Sbjct: 839 PADDTNSDWKTTHFDFHSIHD-NLLKLDILGHDDPTMIKMLQDLTG-----IDPKTIPMD 892
Query: 605 DHET--------------YHLLTTKGTLGIFQLESSGMRQALEGMQPDCIEDIIALVSLY 650
D E +L GTLGI + + +R LE +P D++ + L
Sbjct: 893 DKEVMSIFSSPKALGVTPEEILEKTGTLGIPEFGTKFVRGMLEETKPKTFADLVRISGLS 952
Query: 651 RPGPIDNIVVYNNRKNGKEKIVSIHPLIDPMLKETQGVIIYQEQVMQIAQLLSGYSLSEA 710
V N LI +K VI ++ +M + + G A
Sbjct: 953 H----GTDVWLGN----------AQDLIKSGIKTLSDVIGCRDDIM-VYLIHKGLEPKLA 997
Query: 711 ----DVLRRAMGKKIKEEM------DKQKERFISGASKNGISKTIAVNIFELLAKFADYG 760
+ +R+ GK +K E +K E +I K I Y
Sbjct: 998 FKIMEKVRK--GKGLKAEYIELMKENKVPEWYIESCLK--IK----------------YM 1037
Query: 761 FNKSHAAAYAVISYQTAWMKTHYPVEFLAASMTLEMDN---------VEKIKKFCQD--A 809
F K+HAAAY +++++ A+ K HYP+E+ AA ++ E IK+ ++
Sbjct: 1038 FPKAHAAAYVLMAWRIAYFKVHYPLEYYAAYFSIRAKAFDLETMIKGKEFIKQKLEEINT 1097
Query: 810 RQFNIQIMPPSVNTPCV----------DFKVGDNRIYYSLA---------------AIKG 844
R+ + P + V FK +Y S A AI G
Sbjct: 1098 RRKINKASPKEKDLLTVLEIVLEMMARGFKFQPIDLYKSQATEFLIEGNTLIPPFNAIPG 1157
Query: 845 VGTTTARHIMEASADKPFDSLEDFCSRVDSKKLNRRVLESLVFAGALD 892
+G A I+EA +KPF S ED R K+++ +E L G LD
Sbjct: 1158 LGENVANSIVEARNEKPFLSKEDLKKRT---KISKTHIEKLDSMGVLD 1202