HHsearch alignment for GI: peg_754 and conserved domain: COG0587
>COG0587 DnaE DNA polymerase III, alpha subunit [DNA replication, recombination, and repair].
Probab=98.26 E-value=5e-06 Score=58.45 Aligned_cols=148 Identities=20% Similarity=0.225 Sum_probs=103.2
Q ss_pred CCHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEE
Q ss_conf 71100286676148985013443332355531027875221058999998787524998289998410016777642698
Q 537021.9.peg.7 11 NRKGKKKPDGNHDFLFLEDCYDHAIEMKLQEAEEDPNFLSLQEQQQLEEEKPRLLREKKPYIIVVSQEDKLSLQRDSIRL 90 (184)
Q Consensus 11 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~LLe~gkpvii~VsAe~rle~eg~~LRi 90 (184)
T Consensus 988 vr~~~tk~~G~~-~~f------------~tl~D~~g~~e~v~f~~~~~~~~~-~l~~~~~~~v~g~v~~~~~~~~~~~~~ 1053 (1139)
T COG0587 988 VRQRPTKAKGNK-MAF------------LTLEDETGILEVVVFPSEYERYRR-LLLEGRLLIVKGKVQRREDGVGHALIL 1053 (1139)
T ss_pred EEEEECCCCCCE-EEE------------EEEECCCCCEEEEECHHHHHHHHH-HHCCCCEEEEEEEEEECCCCCCHHHHH
T ss_conf 899632678977-999------------998337885799986899999998-741483799999986146664211007
Q ss_pred EECCCHHHHHHHHCCCEEEEEE-CCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCHHHHHHHH
Q ss_conf 6504158999732011099973-801578999996112210378887139999748985479996689707898999874
Q 537021.9.peg.7 91 LWVESLEKKSMEMLDSLRVYLQ-DRSPLREIHKYFENRQTQNYDKQGKIGLIFLRSQGKIEIEITLDHYPISPEIAFDLE 169 (184)
Q Consensus 91 ~~vepLD~aAa~~~kgLRIfVr-D~~pL~sI~s~Le~~~~~~~~G~G~V~Lvli~~~~~~EVEI~Lp~f~VSPqIagALK 169 (184)
T Consensus 1054 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~v~-~l~~~l~ 1130 (1139)
T COG0587 1054 EDLSPLEEARERVADFLAIYLRLNTSQLD--RLKLLKIKSILRQGKGKTPVILIYQNGDSRNFLRLGELRVS-TLVEALK 1130 (1139)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCHHHHH--HHHHHHHHHHHCCCCCCCCEEEEECCCCHHHEEECCCEEHH-HHHHHHH
T ss_conf 87776888887655431010136733332--55430123332037998537998415650230014514799-9999863
Q ss_pred HCCCHHEH
Q ss_conf 06462111
Q 537021.9.peg.7 170 HITGITKV 177 (184)
Q Consensus 170 sIpGVl~V 177 (184)
T Consensus 1131 --~~~~~~ 1136 (1139)
T COG0587 1131 --DGKGNV 1136 (1139)
T ss_pred --CCCCCE
T ss_conf --576544