HHsearch alignment for GI: peg_754 and conserved domain: COG0587

>COG0587 DnaE DNA polymerase III, alpha subunit [DNA replication, recombination, and repair].
Probab=98.26  E-value=5e-06  Score=58.45  Aligned_cols=148  Identities=20%  Similarity=0.225  Sum_probs=103.2

Q ss_pred             CCHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEE
Q ss_conf             71100286676148985013443332355531027875221058999998787524998289998410016777642698
Q 537021.9.peg.7   11 NRKGKKKPDGNHDFLFLEDCYDHAIEMKLQEAEEDPNFLSLQEQQQLEEEKPRLLREKKPYIIVVSQEDKLSLQRDSIRL   90 (184)
Q Consensus        11 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~LLe~gkpvii~VsAe~rle~eg~~LRi   90 (184)
T Consensus       988 vr~~~tk~~G~~-~~f------------~tl~D~~g~~e~v~f~~~~~~~~~-~l~~~~~~~v~g~v~~~~~~~~~~~~~ 1053 (1139)
T COG0587         988 VRQRPTKAKGNK-MAF------------LTLEDETGILEVVVFPSEYERYRR-LLLEGRLLIVKGKVQRREDGVGHALIL 1053 (1139)
T ss_pred             EEEEECCCCCCE-EEE------------EEEECCCCCEEEEECHHHHHHHHH-HHCCCCEEEEEEEEEECCCCCCHHHHH
T ss_conf             899632678977-999------------998337885799986899999998-741483799999986146664211007


Q ss_pred             EECCCHHHHHHHHCCCEEEEEE-CCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCHHHHHHHH
Q ss_conf             6504158999732011099973-801578999996112210378887139999748985479996689707898999874
Q 537021.9.peg.7   91 LWVESLEKKSMEMLDSLRVYLQ-DRSPLREIHKYFENRQTQNYDKQGKIGLIFLRSQGKIEIEITLDHYPISPEIAFDLE  169 (184)
Q Consensus        91 ~~vepLD~aAa~~~kgLRIfVr-D~~pL~sI~s~Le~~~~~~~~G~G~V~Lvli~~~~~~EVEI~Lp~f~VSPqIagALK  169 (184)
T Consensus      1054 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~v~-~l~~~l~ 1130 (1139)
T COG0587        1054 EDLSPLEEARERVADFLAIYLRLNTSQLD--RLKLLKIKSILRQGKGKTPVILIYQNGDSRNFLRLGELRVS-TLVEALK 1130 (1139)
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCHHHHH--HHHHHHHHHHHCCCCCCCCEEEEECCCCHHHEEECCCEEHH-HHHHHHH
T ss_conf             87776888887655431010136733332--55430123332037998537998415650230014514799-9999863


Q ss_pred             HCCCHHEH
Q ss_conf             06462111
Q 537021.9.peg.7  170 HITGITKV  177 (184)
Q Consensus       170 sIpGVl~V  177 (184)
T Consensus      1131 --~~~~~~ 1136 (1139)
T COG0587        1131 --DGKGNV 1136 (1139)
T ss_pred             --CCCCCE
T ss_conf             --576544