HHsearch results for GI: peg_754 and protein with PDBid: 2hpi_A
>2hpi_A DNA polymerase III alpha subunit; POL-beta-like nucleotidyltransferase fold; HET: DNA; 3.00A {Thermus aquaticus} PDB: 2hpm_A* 3e0d_A*
Probab=98.77 E-value=1e-08 Score=73.79 Aligned_cols=137 Identities=16% Similarity=0.085 Sum_probs=110.1
Q ss_pred CCCHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEE
Q ss_conf 87110028667614898501344333235553102787522105899999878752499828999841001677764269
Q 537021.9.peg.7 10 NNRKGKKKPDGNHDFLFLEDCYDHAIEMKLQEAEEDPNFLSLQEQQQLEEEKPRLLREKKPYIIVVSQEDKLSLQRDSIR 89 (184)
Q Consensus 10 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~LLe~gkpvii~VsAe~rle~eg~~LR 89 (184)
.++|.+++..|+. ++| +...|+||+++++-|..+++.-+ .+|..|.+++|...-+ + .++++++
T Consensus 1052 ~~v~~~~TKkG~~-maf------------~tleD~tG~iev~vF~~~y~~~~-~~L~~~~~l~v~G~v~-~--~~~~~i~ 1114 (1220)
T 2hpi_A 1052 EEVVRKPTRSGGM-MAR------------FTLSDETGALEVVVFGRAYEGVS-PKLKEDIPLLVLAEVE-K--GEELRVL 1114 (1220)
T ss_dssp CCC-------------C------------EEEEETTEEEEEC--------------CTTCEEEEEEEEC--------CEE
T ss_pred EEEEECCCCCCCE-EEE------------EEEEECCCCEEEEECHHHHHHHH-HHHCCCCEEEEEEEEE-E--CCCEEEE
T ss_conf 7889732799996-999------------99998999889998379999998-8753598799999999-8--9944899
Q ss_pred EEECCCHHHHHHHHCCCEEEEEE----CCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCHHHH
Q ss_conf 86504158999732011099973----80157899999611221037888713999974898547999668970789899
Q 537021.9.peg.7 90 LLWVESLEKKSMEMLDSLRVYLQ----DRSPLREIHKYFENRQTQNYDKQGKIGLIFLRSQGKIEIEITLDHYPISPEIA 165 (184)
Q Consensus 90 i~~vepLD~aAa~~~kgLRIfVr----D~~pL~sI~s~Le~~~~~~~~G~G~V~Lvli~~~~~~EVEI~Lp~f~VSPqIa 165 (184)
+..|.+|+++... .+.+.|.+. ++..+..+++.|+. ..|.-+|.|.+..++ .++-+.|+..++++++.
T Consensus 1115 ~~~i~~L~~~~~~-~~~l~i~l~~~~~~~~~l~~l~~il~~-----~~G~~~V~l~~~~~~--~~~~~~l~~~~v~~el~ 1186 (1220)
T 2hpi_A 1115 AQAVWTLEEVLEA-PKALEVEVDHALLDEKGVARLKSLLDE-----HPGSLPVYLRVLGPF--GEALFALREVRVGEEAL 1186 (1220)
T ss_dssp EEEEEEHHHHTTS-CEEEEEEECSCCCTTTC-CHHHHHHHT-----SEEEEEEEEEEECSS--SEEEEEEEEEEECSTHH
T ss_pred EEECCCHHHHHCC-CCEEEEEECHHHCCHHHHHHHHHHHHH-----CCCCCEEEEEEECCC--CEEEEEECCCCCCHHHH
T ss_conf 8351559999611-762899943474799999999999973-----969975999998699--45999827812799999
Q ss_pred HHHHHC
Q ss_conf 987406
Q 537021.9.peg.7 166 FDLEHI 171 (184)
Q Consensus 166 gALKsI 171 (184)
..|++-
T Consensus 1187 ~~L~~~ 1192 (1220)
T 2hpi_A 1187 GLLEAE 1192 (1220)
T ss_dssp HHHTTT
T ss_pred HHHHHC
T ss_conf 998748