HHsearch alignment of GI: peg_788 and MMDB domain: 3is6_A_
>3is6_A (A:) Putative permease protein, ABC transporter; domain, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.95A {Porphyromonas gingivalis W83}
Probab=99.31 E-value=2e-13 Score=94.96 Aligned_cols=164 Identities=11% Similarity=-0.023 Sum_probs=117.4
Q ss_pred CCHHHHHHHHHCCCCHHHHHHHHHCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 21366655542264103466542001111-12223322101112431000001200110027754211112342101345
Q 537021.9.peg.7 78 VDYQFIANRLDFIPDVIKVLPFVSGQAFV-SGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDL 156 (270)
Q Consensus 78 ~~~~~~~~~l~~~~~V~~~~p~i~~~~~i-~~~~~~~~~v~i~Gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiiG~~l 156 (270)
..++.+.+.+++.|+|+.++|+....+-. ...++....+.+.|++|++++.... ....|+.....+..+.|+||+.+
T Consensus 39 ~~~~~~~~l~~~~p~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~Gr~~~~~d~~~~vvi~~~~ 116 (244)
T 3is6_A 39 VSGGVAPAIQEEIPGVELATRTTLYGTSKXILEDNKTYETKTLLAEPAFLDXFGV--ELIAGVRDSALRDNXTCLISESL 116 (244)
T ss_dssp BCTTHHHHHHHHCTTEEEEEEEEEEEEEEEEETTTEEEEEEEEEECTHHHHHTTC--CEEEECGGGTTCSTTEEEEEHHH
T ss_pred CCHHHHHHHHHHCHHHHEEEEEEECCCCEEEECCCEEEEEEEEEECHHHHHHCCC--CEEECCCCHHHCCCCEEEECHHH
T ss_conf 6577999999878223203677304761377548757750069989528977597--25605811454389989989999
Q ss_pred HHHH-HCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECC-CCCCCEEEEEHHHHHHHCC---CCCCEEEEEEEE
Q ss_conf 4554-2133320231134421000122110000122102331024-4555168985488999718---998710799995
Q 537021.9.peg.7 157 ARNL-GISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFP-DYDNGMVYMSLQEAQLYFN---LENAVSGIEVFV 231 (270)
Q Consensus 157 A~~L-~l~vGD~i~l~~~~~~~~~~~~~~~~~~f~V~GI~~sg~~-~~D~~~v~~~l~~~q~l~~---~~~~~~~i~i~l 231 (270)
|+++ +..+|++|.+..+.+ .+.|+|+||++.... ...+..+++|+.+.+..+. ..+..+.+.+++
T Consensus 117 A~~~f~~~iG~~i~~~~~~~----------~~~~~VvGV~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~~~i~v~~ 186 (244)
T 3is6_A 117 ARKXGGDVLGKRLRPAESKS----------DRAITIGGVFEDLPHNSSIQADXLLPITWXPAESLNNWIGNDRYIAYVRL 186 (244)
T ss_dssp HHHTTSCCTTCEEEETTCCS----------SCCEEEEEEECCCCSSBSCCCSEEEEGGGSCHHHHTCCSSCCCBEEEEEE
T ss_pred HHHHCCCCCCCEEEECCCCC----------CCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEE
T ss_conf 99853655577798623578----------87419999947897567665339997523232245776678746999996
Q ss_pred CCHHHHHHHHHHHHHHCCCCEE
Q ss_conf 6988999999999986199859
Q 537021.9.peg.7 232 KDPDAIEKTHENIVRILGNGVV 253 (270)
Q Consensus 232 ~d~~~~~~~~~~i~~~l~~~~~ 253 (270)
++..+.+++.++|++.+...+.
T Consensus 187 ~~~~~~~~~~~~i~~~l~~~~~ 208 (244)
T 3is6_A 187 RPGVSPESLDEALLEXQKRHQD 208 (244)
T ss_dssp CTTCCGGGGHHHHHHHHHHHCC
T ss_pred CCCCCHHHHHHHHHHHHHHHCC
T ss_conf 8999999999999999988446