BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= 537021.9.peg.788_1
(270 letters)
Database: nr
13,984,884 sequences; 4,792,584,752 total letters
Searching..................................................done
>gi|77166127|ref|YP_344652.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Nitrosococcus oceani ATCC 19707]
gi|254435900|ref|ZP_05049407.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Nitrosococcus oceani AFC27]
gi|76884441|gb|ABA59122.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Nitrosococcus oceani ATCC 19707]
gi|207089011|gb|EDZ66283.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Nitrosococcus oceani AFC27]
Length = 415
Score = 178 bits (451), Expect = 6e-43, Method: Composition-based stats.
Identities = 75/268 (27%), Positives = 135/268 (50%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+N FIS S S +GV +GV ALI V+SVMNGF +++ R+L
Sbjct: 1 MFKPLPLYIGLRYTRAKRRNYFISFISLTSMLGVALGVAALITVLSVMNGFEKELRTRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ HV++ L +Q + +L+ + + PF+ GQ + + ++ +
Sbjct: 61 GMVAHVIVTGPDGTLEHWQALKTQLEENAKIAGIAPFIEGQGMATHRNQVQGTLVRGILP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ L G++ +++G DLAR LG+ IGDKI +++P+ TP G+
Sbjct: 121 QQEDQVLDIHGKMVAGSLDALRPGSFQIVLGMDLARTLGVFIGDKITLVTPHATTTPAGI 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K TV G+F++ +YD+ + M+L++A + F + VSG+ + + D + +
Sbjct: 181 IPRLKRVTVAGVFQVGMYEYDSALAIMNLEDAAVLFRIPGKVSGLRLKLDDLFSAPRLAR 240
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ L DW ++ FF ++
Sbjct: 241 ELRETLPGNYRTADWTYQHANFFRALKT 268
>gi|283138921|gb|ADB12524.1| permease protein LolE [uncultured bacterium 9F08]
Length = 415
Score = 178 bits (451), Expect = 6e-43, Method: Composition-based stats.
Identities = 75/268 (27%), Positives = 136/268 (50%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ ++ + RY + R+N FIS S S +G+ +GV ALI V+SVMNGF ++ +R+L
Sbjct: 1 MYRPLQLFIGLRYTRAKRRNHFISFISLTSMLGIALGVTALITVLSVMNGFETELRQRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I PL +Q +++ D P+V+ P++ + + +L +
Sbjct: 61 GMTSHATISGYGQPLTRWQGLSDIADTHPEVLGSAPYIQKEGMLVHGQEVNGSILRGILP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ +G++ + +I+G DLAR LG+ GDK+ +++P +VTP G+
Sbjct: 121 QQEPKVSSVGEDMLHGSLDDLQAGEFRIILGVDLARILGVMPGDKVTLVTPSANVTPAGV 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV G+F + +YD+ M + L +A+ F +++AV+G+ + + D
Sbjct: 181 MPRMKRFTVSGIFEVGMYEYDSAMALIHLDDARRLFRMDDAVTGLRLKLDDMFRAPLVSR 240
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ L V DW Q + FF ++
Sbjct: 241 ELAERLPGIYQVRDWTQYHANFFRAIKT 268
>gi|121998042|ref|YP_001002829.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Halorhodospira halophila SL1]
gi|121589447|gb|ABM62027.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Halorhodospira halophila SL1]
Length = 414
Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats.
Identities = 72/268 (26%), Positives = 131/268 (48%), Gaps = 1/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F E+ + RY + R+ F+S S S IG+ +GV ALI V+SVMNGF ++ +R+L
Sbjct: 1 MFRPVELFIGLRYTRARRRGHFVSFISMTSMIGIALGVAALITVLSVMNGFERELRERIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H + + D+ + R + P V+ PF+ G+ V+ SG L+RG+
Sbjct: 61 GMVSHAEVHGAQRQVEDWPGVLERAERHPRVVGAAPFIDGEVMVTRG-GQVSGTLIRGVD 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + + G+I+G LAR LG +GD+I +++P V+ G+
Sbjct: 120 PDLEPSVSDVLDQVIAGEAKLEAGEFGLIMGSALARELGARVGDRITVITPEARVSVAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + +T+ G+F + +YD + +++ + + VSGI + + D A
Sbjct: 180 TPRMRRFTLTGIFEVGMHEYDRTLAIAHIEDMARVKGMGDGVSGIRLKLDDMMAAPWLAR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ L V+DW +++ FF ++
Sbjct: 240 EVADDLPGQYRVVDWTRQHANFFRAVQT 267
>gi|220934538|ref|YP_002513437.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Thioalkalivibrio sp. HL-EbGR7]
gi|219995848|gb|ACL72450.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Thioalkalivibrio sp. HL-EbGR7]
Length = 415
Score = 176 bits (444), Expect = 4e-42, Method: Composition-based stats.
Identities = 76/268 (28%), Positives = 138/268 (51%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F E+ + RY + R+N FIS S IS G+ +GV ALI V+SVMNGF +++ +R+L
Sbjct: 1 MFRPLELYIGLRYTRAKRRNHFISFISLISMAGIALGVTALITVLSVMNGFEKELRERIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I L D+Q +A R++ P V+ P++ + + G ++ +
Sbjct: 61 GMVSHATISDFSGRLADWQTLAARIEGEPRVLGAAPYIQAEGMLQGQGQVSGALIRGILP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + +G++ GV++GK+LA +LG +GD++ +++P VTP G+
Sbjct: 121 EREKHVSRVAEHIKFGSMEALRGGEYGVVLGKELAASLGAGVGDRVTLVTPQATVTPAGV 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + V+G+F + +YD +M L +A+ F E+ V+G+ + + D
Sbjct: 181 MPRLRRLLVVGVFEVGMYEYDRSTAFMHLDDARRVFQYEDNVTGLRLKMDDMMRAPFIAR 240
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYES 270
++ LG V DW +++ FF +
Sbjct: 241 DVADRLGGRYWVSDWTRQHANFFRAVRT 268
>gi|300113158|ref|YP_003759733.1| lipoprotein releasing system transmembrane protein [Nitrosococcus
watsonii C-113]
gi|299539095|gb|ADJ27412.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Nitrosococcus watsonii C-113]
Length = 415
Score = 176 bits (444), Expect = 4e-42, Method: Composition-based stats.
Identities = 75/268 (27%), Positives = 137/268 (51%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+N FIS S S +GV +GV ALI V+SVMNGF +++ R+L
Sbjct: 1 MFKPLPLYIGLRYTRAKRRNYFISFISLTSMLGVALGVAALITVLSVMNGFEKELRTRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ HV++ L +Q + +L+ + + PF+ GQ V+ + ++ +
Sbjct: 61 GMVAHVIVTGPDGTLEHWQALKTQLEKNAKIAGIAPFIEGQGMVTHRNQVQGTLVRGILP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ L G++ +++G DLAR LG+ IGDKI +++P+ TP G+
Sbjct: 121 QQEHQVLDIHDKMVAGSLDALRPGSFQIVLGMDLARTLGVFIGDKITLVTPHATTTPAGI 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K TV G+F++ +YD+ + M+L++A + F + VSG+ + + + + +
Sbjct: 181 IPRLKRLTVAGVFQVGMYEYDSALAIMNLEDAAVLFRIPGKVSGLRLKLDNLFSAPRLAH 240
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ L + DW ++ FF ++
Sbjct: 241 ELRETLPSNYRTADWTYQHANFFRALKT 268
>gi|292490665|ref|YP_003526104.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Nitrosococcus halophilus Nc4]
gi|291579260|gb|ADE13717.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Nitrosococcus halophilus Nc4]
Length = 415
Score = 174 bits (441), Expect = 8e-42, Method: Composition-based stats.
Identities = 73/268 (27%), Positives = 134/268 (50%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RY + R++ FIS S S +GV +GV ALI V+SVMNGF +++ R+L
Sbjct: 1 MFKPLPFYIGLRYTRAKRRSHFISFISLTSMLGVSLGVAALITVLSVMNGFEKELRTRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ HV++ L ++Q + +L+ ++ + PFV GQ ++ S ++ +
Sbjct: 61 GMVSHVIVTGPDGTLGNWQALKAQLEKDSRLVGIAPFVEGQGMLTHRSQVRGTLVRGILP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G++ +++G DLAR LG+ +GDKI +++P+ TP G+
Sbjct: 121 QQEDQVADIRSKMVVGSLDVLHPGSFQIVLGMDLARALGVFVGDKITLVTPHATTTPAGV 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K TV G+F++ +YD+ + M+L++A L F + +SG+ + + +
Sbjct: 181 IPRLKRLTVAGVFQVGMYEYDSALAVMNLEDAALLFRIPGKISGLRLKLDNLFKAPYVAR 240
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ L DW ++ FF ++
Sbjct: 241 ELRETLPGSYRTADWTYQHANFFRALKT 268
>gi|116251486|ref|YP_767324.1| transmembrane component of ABC transporter [Rhizobium leguminosarum
bv. viciae 3841]
gi|115256134|emb|CAK07215.1| putative transmembrane component of ABC transporter [Rhizobium
leguminosarum bv. viciae 3841]
Length = 434
Score = 172 bits (434), Expect = 6e-41, Method: Composition-based stats.
Identities = 114/266 (42%), Positives = 164/266 (61%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE +VAWRYL + RK AFIS+ + SF+G+M+GV LI+VM+VMNGFR +++ R+LG
Sbjct: 21 FSTFERLVAWRYLRARRKEAFISVIAGFSFVGIMLGVATLIIVMAVMNGFRTELVSRILG 80
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
INGH+++Q P DY ++++L +P V LP V GQ S + G +G LVRG
Sbjct: 81 INGHMIVQPVDGPFTDYPALSSKLAGVPGVKMALPLVEGQVLASAQAGGSTGALVRGARA 140
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D + L+ + G GV+IG +A LG+ +GD I + SP GD+TPMG+
Sbjct: 141 EDLTKLKTVSDNIKSGDMVGYASGDGVLIGTRMADQLGLRVGDLITLTSPDGDITPMGVS 200
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R KSY + G+F + +YD+ +++M L+EAQLYFN E V IE+FV +PD I+
Sbjct: 201 PRIKSYKISGLFEIGMSEYDSSIIFMPLEEAQLYFNAEGLVQSIELFVDNPDDIDDLRPK 260
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ G + + DW+QR Q FFS +
Sbjct: 261 VEEAAGRQIAITDWRQRNQTFFSALQ 286
>gi|224827159|ref|ZP_03700255.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Lutiella nitroferrum 2002]
gi|224600668|gb|EEG06855.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Lutiella nitroferrum 2002]
Length = 415
Score = 171 bits (432), Expect = 8e-41, Method: Composition-based stats.
Identities = 83/267 (31%), Positives = 143/267 (53%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ FE ++ +RYL + R+N FIS S +S +G+ +GV ALI+V+SVMNGF++++ R+L
Sbjct: 1 MALPFEALIGFRYLRAKRRNGFISFISLVSVLGIALGVAALIIVLSVMNGFQKEIRGRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ HV + L D+Q +A P VI PFV+ Q +S + ++
Sbjct: 61 GVASHVEVSTYQGKLSDWQSVAGLAAKEPHVIAAAPFVNAQGLMSAAGNVRGALIRGIDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S+ + G +++ G+++G +LAR L + GDK+ +++P G VTP GM
Sbjct: 121 ASEDRVVDVGKHMVTGKLASLKPGEFGILLGVELARQLNVVTGDKVTVITPEGSVTPAGM 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV+GMF++ +YD+ + + L++AQ+ F + + VSG+ + + DP A
Sbjct: 181 LPRLKQFTVVGMFKVDMFEYDSSLAMIHLKDAQVLFRMGSMVSGVRLKLDDPMAAPLVKA 240
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L + DW +F +
Sbjct: 241 ELRNKLSASALTTDWTDTNANYFRAVQ 267
>gi|307824113|ref|ZP_07654340.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Methylobacter tundripaludum SV96]
gi|307734897|gb|EFO05747.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Methylobacter tundripaludum SV96]
Length = 415
Score = 171 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 79/268 (29%), Positives = 136/268 (50%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RY + R+ FIS + S +G+ +GV ALI V+SVMNGF ++ +R+L
Sbjct: 1 MFKPLIFYIGLRYTRAKRRTQFISFITLTSVLGIALGVTALIAVLSVMNGFEAELRERIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H KY L ++Q + +L P V PF++GQ ++ +L +
Sbjct: 61 GMTSHATATGKYGQLDNWQDLERKLKNYPHVEGTAPFINGQVMINADRRVSGTMLTGILP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + G +S+ G+I+G +LA LG+ +GDKI ++SP + TP G+
Sbjct: 121 EYESRVSEVADKMKEGKLSDLVPGEYGIILGVELANYLGVFMGDKITVISPQINSTPAGI 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + +TV+G+F++ +YD M + L +A F L++AVSG+ + + D K
Sbjct: 181 VPRMRRFTVVGIFKVGMYEYDRNMAMIHLDDAAKLFRLDDAVSGLRIKLDDLFNAPKITR 240
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ L + V DW + FF ++
Sbjct: 241 ALSNALYDDYQVSDWTLAHNNFFRAIQT 268
>gi|261854851|ref|YP_003262134.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Halothiobacillus neapolitanus c2]
gi|261835320|gb|ACX95087.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Halothiobacillus neapolitanus c2]
Length = 415
Score = 171 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 80/268 (29%), Positives = 149/268 (55%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F FE ++ RY + R+N F+S S S IG+ +GV ALIVV+SVMNGF++++ R+L
Sbjct: 1 MFRSFEWLIGLRYTRAKRRNRFVSFISATSIIGITLGVTALIVVISVMNGFQDELRHRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I + L D++ +A ++ PDV+ P+V +A +S + ++
Sbjct: 61 GMTAHATISENGQALQDWRSLAKKVQNEPDVMASAPYVQAEAMLSAQPNVSGAIIRGIEP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G++S+ G G+++G+ LA++LG+++GDK+ +++ VTP+G
Sbjct: 121 KYEDAVTDIGKHMVAGSLSDLKPGGFGIVLGEALAQSLGVAVGDKLMLITANVAVTPVGG 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+R + +TV+G+F++ +YD G ++ L++AQ F + + V+G+ + + D
Sbjct: 181 LLRQRQFTVVGIFKVGMYEYDRGSAFIDLKDAQALFRMGDGVTGLRLKLDDMFRAPWVAR 240
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYES 270
++ LGN DW Q FF ++
Sbjct: 241 DLNLKLGNPYWTTDWTQANGNFFRAVQT 268
>gi|218463077|ref|ZP_03503168.1| putative transmembrane component of ABC transporter [Rhizobium etli
Kim 5]
Length = 286
Score = 171 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 115/266 (43%), Positives = 163/266 (61%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE +VAWRYL + RK AFIS+ + SF+G+M+GV LI+VM+VMNGFR +++ R+LG
Sbjct: 8 FSTFERLVAWRYLRARRKEAFISVIAGFSFVGIMLGVATLIIVMAVMNGFRTELVSRILG 67
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
INGH+++Q P DY +A+RL +P + LP V GQ S + G +G LVRG
Sbjct: 68 INGHMIVQPVDGPFTDYPELASRLAAVPGIKMALPLVEGQVLASAQAGGSTGALVRGARA 127
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D + L+ + G+GV+IG +A LG+ +GD I + SP GDVTPMG+
Sbjct: 128 EDLTKLKTISDNIKSGDMVGYASGEGVLIGTRMADQLGLRVGDLITLTSPEGDVTPMGVN 187
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R KSY + G+F + +YD+ +++M L+EAQLYFN V IE+FV PD I+
Sbjct: 188 PRVKSYKISGLFEIGMSEYDSSIIFMPLEEAQLYFNAAGLVQSIELFVDHPDDIDALRPK 247
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ G + + DW+QR Q FFS +
Sbjct: 248 VEEAAGRQINLTDWRQRNQTFFSALQ 273
>gi|298291827|ref|YP_003693766.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Starkeya novella DSM 506]
gi|296928338|gb|ADH89147.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Starkeya novella DSM 506]
Length = 441
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 103/266 (38%), Positives = 156/266 (58%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE +++ RYL + RK FIS+ + SF+G+M+GV LI+VM+VMNGFR +++ ++LG
Sbjct: 29 FSAFEWMLSLRYLRARRKEGFISVIAGFSFLGIMLGVATLIIVMAVMNGFRTELLSKILG 88
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGH+++Q PL DY +A R+ +P + +P V GQA S GVLVRG+S
Sbjct: 89 LNGHILVQPIDSPLTDYDAVAKRIAGVPGIKLAVPLVEGQALASSAF-NAGGVLVRGLSE 147
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
++ L + FD G G+ IGK LA L + GD + +++P G VTPMG
Sbjct: 148 ANLRALPAIGANIRQGTLEGFDEGSGIAIGKRLADQLSLQAGDNLTLVAPRGAVTPMGTT 207
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K Y + +F + +YD+ V+M L E+Q YFN + V+ IEV+ +PD +E+
Sbjct: 208 PRIKVYKIAAVFEIGMSEYDSAFVFMPLAESQAYFNKDGDVTAIEVYTDNPDNVERLRSQ 267
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ V +IDW+QR FF+ +
Sbjct: 268 VQAAAERPVYIIDWRQRNATFFNALQ 293
>gi|34498419|ref|NP_902634.1| lipoprotein releasing system trasmembrane protein [Chromobacterium
violaceum ATCC 12472]
gi|34104273|gb|AAQ60632.1| lipoprotein releasing system trasmembrane protein [Chromobacterium
violaceum ATCC 12472]
Length = 412
Score = 170 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 79/265 (29%), Positives = 139/265 (52%), Gaps = 1/265 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
FE + RYL + R+N FIS S IS +G+ +GV ALI+V+SVMNGF++++ R+L +
Sbjct: 1 MPFEAFIGLRYLRAKRRNGFISFISLISIVGIALGVAALIIVLSVMNGFQKEIRGRILSV 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H+ + L ++ L P V PFVS Q + G++
Sbjct: 61 ASHLEVSGYDGRLSGWRDAQAMLAKQPHVQAAAPFVSSQGLFVAYGNVRGGLVRGIDPAL 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + G + + G G+ +G +LAR LG+ +GDK+ +++P G++TP GM
Sbjct: 121 ENKVVDVGRHMVAGKLEDLKPGGFGMALGVELARQLGVGVGDKVTLMTPQGNITPAGMVP 180
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
RSK +TV+G+F++ ++D + ++L++AQ+ + +AVSG+ + + DP + +
Sbjct: 181 RSKQFTVVGIFKVDMFEFDASLAMVNLRDAQVLERMGDAVSGVRLRLDDPMLAPQLKAEL 240
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
L ++V DW +F +
Sbjct: 241 RPRLPQ-LLVTDWTDTNANYFRAVQ 264
>gi|153009732|ref|YP_001370947.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Ochrobactrum anthropi ATCC 49188]
gi|151561620|gb|ABS15118.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Ochrobactrum anthropi ATCC 49188]
Length = 438
Score = 170 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 114/266 (42%), Positives = 164/266 (61%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE ++AWRYL + R+ FIS+ + SF G+M+GV LI+VM+VMNGFR +++ R+LG
Sbjct: 25 FSAFERMIAWRYLRARRRETFISVIAGFSFTGIMLGVATLIIVMAVMNGFRAELLSRILG 84
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
INGH+++Q PL DY + R+D I + +P V GQA V G G+G LVRG+
Sbjct: 85 INGHLIMQPIDRPLDDYADLIKRIDGISGIRFAIPVVEGQALVQGNIGAGTGALVRGLRE 144
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D L+ FD+G GV IG +A NLG+SIGD + ++SP GDVTP G+
Sbjct: 145 EDLDKLKLVSGNIRQGTLQGFDQGGGVAIGTRMAENLGLSIGDTLRVISPDGDVTPFGVN 204
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K+Y ++ +F + +YD+ +V M L EAQL+FN E V +E+FV +PD ++
Sbjct: 205 PRVKAYPIVAIFEIGMSEYDSSIVMMPLSEAQLFFNQEGKVQSLEIFVDNPDKVDAMRAP 264
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ G + ++DW+QR Q FFS E
Sbjct: 265 VEEAAGRQLSLVDWRQRNQTFFSALE 290
>gi|254693560|ref|ZP_05155388.1| Bacterial general secretion pathway protein H [Brucella abortus bv.
3 str. Tulya]
gi|261213825|ref|ZP_05928106.1| lipoprotein releasing system [Brucella abortus bv. 3 str. Tulya]
gi|260915432|gb|EEX82293.1| lipoprotein releasing system [Brucella abortus bv. 3 str. Tulya]
Length = 437
Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats.
Identities = 113/266 (42%), Positives = 164/266 (61%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE ++AWRYL + R+ FIS+ + SF G+M+GV LI+VM+VMNGFR +++ R+LG
Sbjct: 24 FSAFERMIAWRYLRARRRETFISVIAGFSFTGIMLGVATLIIVMAVMNGFRAELLTRILG 83
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
INGH+++Q PL DY + R+D IP + +P V GQA V G G+G LVRG+
Sbjct: 84 INGHLIMQPIDRPLDDYADLIKRVDAIPGIKFAIPVVEGQALVQGNIGAGTGALVRGLRE 143
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D L+ S FD GV IG +A NLG+S+GD + ++SP GDVTP G+
Sbjct: 144 EDLDKLKLISSNIRQGTLKGFDHSGGVAIGTRMAENLGLSVGDTLRVISPDGDVTPFGVN 203
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K+Y ++ +F + +YD+ +V M L EAQL+FN E V +E+FV +PD ++ +
Sbjct: 204 PRVKAYPIVAIFEIGMSEYDSSIVMMPLSEAQLFFNQEGKVQSLEIFVDNPDKVDAMRAS 263
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + ++DW+QR Q FFS E
Sbjct: 264 VEEAAARQLSLVDWRQRNQTFFSALE 289
>gi|316933916|ref|YP_004108898.1| lipoprotein releasing system transmembrane protein
[Rhodopseudomonas palustris DX-1]
gi|315601630|gb|ADU44165.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Rhodopseudomonas palustris DX-1]
Length = 422
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 104/266 (39%), Positives = 161/266 (60%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE +++ RYL + R+ FIS+ + SF+G+M+GV LI+VM+VMNGFR++++ ++LG
Sbjct: 10 FAPFEWLLSGRYLRARRREGFISVIAGFSFLGIMLGVATLIIVMAVMNGFRKELLDKILG 69
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGH+++Q PL D++ +A+RL + + P V GQA S SGV VRGI
Sbjct: 70 LNGHLLVQPLESPLTDWKDVADRLSGLQGIKLAAPVVDGQALASSPF-NASGVFVRGIRA 128
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D + L + + + FD G+GV IG+ LA L + GD + +++P G VTPMG
Sbjct: 129 EDLNRLSSIANHLKQGTLDGFDEGQGVAIGRRLADQLSLHAGDSVTLVAPRGAVTPMGTT 188
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K Y V +F + +YD+ V+M L+EAQ YFN N V+ IEV+ +PD I+ +
Sbjct: 189 PRIKPYKVAAVFEIGMSEYDSTFVFMPLKEAQAYFNRANDVTAIEVYTDNPDRIDVYRKA 248
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ G V ++DW+QR FF+ +
Sbjct: 249 VTEAAGRPVFLVDWRQRNSTFFNALQ 274
>gi|306843759|ref|ZP_07476358.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Brucella sp. BO1]
gi|306275950|gb|EFM57663.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Brucella sp. BO1]
Length = 437
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 112/266 (42%), Positives = 163/266 (61%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE ++AWRYL + R+ FIS+ + SF G+M+GV LI+VM+VMNGFR +++ R+LG
Sbjct: 24 FSAFERMIAWRYLRARRRETFISVIAGFSFTGIMLGVATLIIVMAVMNGFRAELLTRILG 83
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
INGH+++Q PL DY + R+D IP + +P V GQA V G G+G LVRG+
Sbjct: 84 INGHLIMQPIDRPLDDYADLIKRVDAIPGIKFAIPVVEGQALVQGNIGAGTGALVRGLRE 143
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D L+ + FD GV IG +A NLG+S+GD + ++SP GDVTP G+
Sbjct: 144 EDLDKLKLISTNIRQGTLKGFDHSGGVAIGTRMAENLGLSVGDTLRVISPDGDVTPFGVN 203
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K+Y ++ +F + +YD+ +V M L EAQL+FN E V +E+FV +PD ++
Sbjct: 204 PRVKAYPIVAIFEIGMSEYDSSIVMMPLSEAQLFFNQEGKVQSLEIFVDNPDKVDAMRAP 263
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + ++DW+QR Q FFS E
Sbjct: 264 VEEAAARQLSLVDWRQRNQTFFSALE 289
>gi|294852179|ref|ZP_06792852.1| lipoprotein-releasing system permease [Brucella sp. NVSL 07-0026]
gi|294820768|gb|EFG37767.1| lipoprotein-releasing system permease [Brucella sp. NVSL 07-0026]
Length = 437
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 113/266 (42%), Positives = 163/266 (61%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE ++AWRYL + R+ FIS+ + SF G+M+GV LI+VM+VMNGFR +++ R+LG
Sbjct: 24 FSAFERMIAWRYLRARRRETFISVIAGFSFTGIMLGVATLIIVMAVMNGFRAELLTRILG 83
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
INGH+++Q PL DY + R+D IP + +P V GQA V G G+G LVRG+
Sbjct: 84 INGHLIMQPIDRPLDDYADLIKRVDAIPGIKFAIPVVEGQALVQGNIGAGTGALVRGVRE 143
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D L+ S FD GV IG +A NLG+S+GD + ++SP GDVTP G+
Sbjct: 144 EDLDKLKLISSNIRQGTLKGFDHSGGVAIGTRMAENLGLSVGDTLRVISPDGDVTPFGVN 203
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K+Y ++ +F + +YD+ +V M L EAQL+FN E V +E+FV +PD ++
Sbjct: 204 PRVKAYPIVAIFEIGMSEYDSSIVMMPLSEAQLFFNQEGKVQSLEIFVDNPDKVDAMRAP 263
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + ++DW+QR Q FFS E
Sbjct: 264 VEEAAARQLSLVDWRQRNQTFFSALE 289
>gi|254701589|ref|ZP_05163417.1| Bacterial general secretion pathway protein H [Brucella suis bv. 5
str. 513]
gi|254704136|ref|ZP_05165964.1| Bacterial general secretion pathway protein H [Brucella suis bv. 3
str. 686]
gi|254706963|ref|ZP_05168791.1| Bacterial general secretion pathway protein H [Brucella
pinnipedialis M163/99/10]
gi|254709929|ref|ZP_05171740.1| Bacterial general secretion pathway protein H [Brucella
pinnipedialis B2/94]
gi|254713930|ref|ZP_05175741.1| Bacterial general secretion pathway protein H [Brucella ceti
M644/93/1]
gi|254717012|ref|ZP_05178823.1| Bacterial general secretion pathway protein H [Brucella ceti
M13/05/1]
gi|256031422|ref|ZP_05445036.1| Bacterial general secretion pathway protein H [Brucella
pinnipedialis M292/94/1]
gi|256113356|ref|ZP_05454214.1| Bacterial general secretion pathway protein H [Brucella melitensis
bv. 3 str. Ether]
gi|256159543|ref|ZP_05457311.1| Bacterial general secretion pathway protein H [Brucella ceti
M490/95/1]
gi|256254830|ref|ZP_05460366.1| Bacterial general secretion pathway protein H [Brucella ceti B1/94]
gi|256264164|ref|ZP_05466696.1| bacterial general secretion pathway protein H [Brucella melitensis
bv. 2 str. 63/9]
gi|260566615|ref|ZP_05837085.1| bacterial general secretion pathway protein H [Brucella suis bv. 4
str. 40]
gi|261218819|ref|ZP_05933100.1| lipoprotein releasing system [Brucella ceti M13/05/1]
gi|261222011|ref|ZP_05936292.1| lipoprotein releasing system protein [Brucella ceti B1/94]
gi|261314426|ref|ZP_05953623.1| lipoprotein releasing system [Brucella pinnipedialis M163/99/10]
gi|261317475|ref|ZP_05956672.1| lipoprotein releasing system [Brucella pinnipedialis B2/94]
gi|261321682|ref|ZP_05960879.1| lipoprotein releasing system [Brucella ceti M644/93/1]
gi|261752142|ref|ZP_05995851.1| lipoprotein releasing system [Brucella suis bv. 5 str. 513]
gi|261754802|ref|ZP_05998511.1| lipoprotein releasing system [Brucella suis bv. 3 str. 686]
gi|265988511|ref|ZP_06101068.1| lipoprotein releasing system protein [Brucella pinnipedialis
M292/94/1]
gi|265994762|ref|ZP_06107319.1| lipoprotein releasing system protein [Brucella melitensis bv. 3
str. Ether]
gi|265997975|ref|ZP_06110532.1| lipoprotein releasing system [Brucella ceti M490/95/1]
gi|260156133|gb|EEW91213.1| bacterial general secretion pathway protein H [Brucella suis bv. 4
str. 40]
gi|260920595|gb|EEX87248.1| lipoprotein releasing system protein [Brucella ceti B1/94]
gi|260923908|gb|EEX90476.1| lipoprotein releasing system [Brucella ceti M13/05/1]
gi|261294372|gb|EEX97868.1| lipoprotein releasing system [Brucella ceti M644/93/1]
gi|261296698|gb|EEY00195.1| lipoprotein releasing system [Brucella pinnipedialis B2/94]
gi|261303452|gb|EEY06949.1| lipoprotein releasing system [Brucella pinnipedialis M163/99/10]
gi|261741895|gb|EEY29821.1| lipoprotein releasing system [Brucella suis bv. 5 str. 513]
gi|261744555|gb|EEY32481.1| lipoprotein releasing system [Brucella suis bv. 3 str. 686]
gi|262552443|gb|EEZ08433.1| lipoprotein releasing system [Brucella ceti M490/95/1]
gi|262765875|gb|EEZ11664.1| lipoprotein releasing system protein [Brucella melitensis bv. 3
str. Ether]
gi|263094382|gb|EEZ18227.1| bacterial general secretion pathway protein H [Brucella melitensis
bv. 2 str. 63/9]
gi|264660708|gb|EEZ30969.1| lipoprotein releasing system protein [Brucella pinnipedialis
M292/94/1]
Length = 437
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 113/266 (42%), Positives = 163/266 (61%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE ++AWRYL + R+ FIS+ + SF G+M+GV LI+VM+VMNGFR +++ R+LG
Sbjct: 24 FSAFERMIAWRYLRARRRETFISVIAGFSFTGIMLGVATLIIVMAVMNGFRAELLTRILG 83
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
INGH+++Q PL DY + R+D IP + +P V GQA V G G+G LVRG+
Sbjct: 84 INGHLIMQPIDRPLDDYADLIKRVDAIPGIKFAIPVVEGQALVQGNIGAGTGALVRGLRE 143
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D L+ S FD GV IG +A NLG+S+GD + ++SP GDVTP G+
Sbjct: 144 EDLDKLKLISSNIRQGTLKGFDHSGGVAIGTRMAENLGLSVGDTLRVISPDGDVTPFGVN 203
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K+Y ++ +F + +YD+ +V M L EAQL+FN E V +E+FV +PD ++
Sbjct: 204 PRVKAYPIVAIFEIGMSEYDSSIVMMPLSEAQLFFNQEGKVQSLEIFVDNPDKVDAMRAP 263
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + ++DW+QR Q FFS E
Sbjct: 264 VEEAAARQLSLVDWRQRNQTFFSALE 289
>gi|256060933|ref|ZP_05451091.1| Bacterial general secretion pathway protein H [Brucella neotomae
5K33]
gi|261324933|ref|ZP_05964130.1| lipoprotein releasing system protein [Brucella neotomae 5K33]
gi|261300913|gb|EEY04410.1| lipoprotein releasing system protein [Brucella neotomae 5K33]
Length = 437
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 113/266 (42%), Positives = 163/266 (61%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE ++AWRYL + R+ FIS+ + SF G+M+GV LI+VM+VMNGFR +++ R+LG
Sbjct: 24 FSAFERMIAWRYLRARRRETFISVIAGFSFTGIMLGVATLIIVMAVMNGFRAELLTRILG 83
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
INGH+++Q PL DY + R+D IP + +P V GQA V G G+G LVRG+
Sbjct: 84 INGHLIMQPIDRPLDDYADLIKRVDAIPGIKFAIPVVEGQALVQGNIGAGTGALVRGLRE 143
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D L+ S FD GV IG +A NLG+S+GD + ++SP GDVTP G+
Sbjct: 144 EDLDKLKLISSNIRQGTLKGFDHSGGVAIGTRMAENLGLSVGDTLRVISPDGDVTPFGVN 203
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K+Y ++ +F + +YD+ +V M L EAQL+FN E V +E+FV +PD ++
Sbjct: 204 PRVKAYPIVAIFEIGMSEYDSSIVMMPLSEAQLFFNQEGKVQSLEIFVDNPDKVDAMRAP 263
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + ++DW+QR Q FFS E
Sbjct: 264 VEEAAARQLSLVDWRQRNQTFFSALE 289
>gi|114707389|ref|ZP_01440286.1| hypothetical protein FP2506_04185 [Fulvimarina pelagi HTCC2506]
gi|114537270|gb|EAU40397.1| hypothetical protein FP2506_04185 [Fulvimarina pelagi HTCC2506]
Length = 429
Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats.
Identities = 114/266 (42%), Positives = 157/266 (59%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FSRFE ++A RYL S ++ A +S+ + SF+G+M+GV ALI+VMSVMNGFR +++ R+LG
Sbjct: 16 FSRFEWLLAGRYLRSRKREAGVSVIAGFSFVGIMLGVAALIIVMSVMNGFRTELLSRILG 75
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGHV++ PL DY +A R+D +P V +P V GQ G+ + SG LV+G+S
Sbjct: 76 VNGHVIVMPIDQPLSDYDEVAQRIDQVPGVAYSMPLVQGQILSQGMGTSSSGALVKGVSE 135
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ L +FD G+GV IG LA LG+ I D+I ++SP GDVTP+G
Sbjct: 136 ASLKSLTPVSDNISQGSIENFDGGEGVAIGARLAERLGLRIEDRITLISPEGDVTPLGTT 195
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R KSY V +F + +YD VYM L EAQL+FN E +EVFV DPD +
Sbjct: 196 PRVKSYPVDAIFEIGLSEYDAAYVYMPLSEAQLFFNSEGETQSVEVFVDDPDNVADLQPA 255
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
I V + WQ + Q FFS +
Sbjct: 256 IEAAAQRPVYSVTWQSQNQSFFSALQ 281
>gi|256044500|ref|ZP_05447404.1| Bacterial general secretion pathway protein H [Brucella melitensis
bv. 1 str. Rev.1]
gi|260563854|ref|ZP_05834340.1| bacterial general secretion pathway protein [Brucella melitensis
bv. 1 str. 16M]
gi|265990924|ref|ZP_06103481.1| lipoprotein releasing system [Brucella melitensis bv. 1 str. Rev.1]
gi|260153870|gb|EEW88962.1| bacterial general secretion pathway protein [Brucella melitensis
bv. 1 str. 16M]
gi|263001708|gb|EEZ14283.1| lipoprotein releasing system [Brucella melitensis bv. 1 str. Rev.1]
Length = 437
Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats.
Identities = 112/266 (42%), Positives = 163/266 (61%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE ++AWRYL + R+ FIS+ + SF G+M+GV LI+VM+VMNGFR +++ R+LG
Sbjct: 24 FSAFERMIAWRYLRARRRETFISVIAGFSFTGIMLGVATLIIVMAVMNGFRAELLTRILG 83
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
INGH+++Q PL DY + R++ IP + +P V GQA V G G+G LVRG+
Sbjct: 84 INGHLIMQPIDRPLDDYADLIKRVNAIPGIKFAIPVVEGQALVQGNIGAGTGALVRGLRE 143
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D L+ S FD GV IG +A NLG+S+GD + ++SP GDVTP G+
Sbjct: 144 EDLDKLKLISSNIRQGTLKGFDHSGGVAIGTRMAENLGLSVGDTLRVISPDGDVTPFGVN 203
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K+Y ++ +F + +YD+ +V M L EAQL+FN E V +E+FV +PD ++
Sbjct: 204 PRVKAYPIVAIFEIGMSEYDSSIVMMPLSEAQLFFNQEGKVQSLEIFVDNPDKVDAMRAP 263
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + ++DW+QR Q FFS E
Sbjct: 264 VEEAAARQLSLVDWRQRNQTFFSALE 289
>gi|91977334|ref|YP_569993.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Rhodopseudomonas palustris BisB5]
gi|91683790|gb|ABE40092.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Rhodopseudomonas palustris BisB5]
Length = 422
Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats.
Identities = 102/266 (38%), Positives = 162/266 (60%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE +++ RYL + R+ FIS+ + SF+G+M+GV LI+VM+VMNGFR++++ ++LG
Sbjct: 10 FAPFEWLLSGRYLRARRREGFISVIAGFSFLGIMLGVATLIIVMAVMNGFRKELLDKILG 69
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGH+++Q PL D++ +A+R+ + + P + GQA S SGVLVRGI
Sbjct: 70 LNGHLLVQPLESPLTDWKDVADRISGVQGIKLAAPVIDGQALASSPF-NASGVLVRGIRA 128
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D + L + + FD G+GV IG+ LA L + GD + +++P G VTPMG
Sbjct: 129 DDLNNLSSIANHIKQGTLEGFDDGQGVAIGRRLADQLSLHAGDSVTLVAPRGAVTPMGTT 188
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K Y + +F + +YD+ V+M L+EAQ YFN N V+ IEV+ +PD I+ ++
Sbjct: 189 PRIKPYKITAVFEIGMSEYDSTFVFMPLKEAQAYFNRNNDVTAIEVYTTNPDRIDAFRKS 248
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ G V ++DW+QR FF+ +
Sbjct: 249 VTEAAGRPVFLVDWRQRNSTFFNALQ 274
>gi|189024015|ref|YP_001934783.1| Bacterial general secretion pathway protein H [Brucella abortus
S19]
gi|237815258|ref|ZP_04594256.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Brucella abortus str. 2308 A]
gi|254689077|ref|ZP_05152331.1| Bacterial general secretion pathway protein H [Brucella abortus bv.
6 str. 870]
gi|254697211|ref|ZP_05159039.1| Bacterial general secretion pathway protein H [Brucella abortus bv.
2 str. 86/8/59]
gi|254730108|ref|ZP_05188686.1| Bacterial general secretion pathway protein H [Brucella abortus bv.
4 str. 292]
gi|256257326|ref|ZP_05462862.1| Bacterial general secretion pathway protein H [Brucella abortus bv.
9 str. C68]
gi|260545480|ref|ZP_05821221.1| bacterial general secretion pathway protein H [Brucella abortus
NCTC 8038]
gi|260754575|ref|ZP_05866923.1| lipoprotein releasing system [Brucella abortus bv. 6 str. 870]
gi|260757798|ref|ZP_05870146.1| lipoprotein releasing system [Brucella abortus bv. 4 str. 292]
gi|260761621|ref|ZP_05873964.1| lipoprotein releasing system [Brucella abortus bv. 2 str. 86/8/59]
gi|260883602|ref|ZP_05895216.1| lipoprotein releasing system protein [Brucella abortus bv. 9 str.
C68]
gi|189019587|gb|ACD72309.1| Bacterial general secretion pathway protein H [Brucella abortus
S19]
gi|237790095|gb|EEP64305.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Brucella abortus str. 2308 A]
gi|260096887|gb|EEW80762.1| bacterial general secretion pathway protein H [Brucella abortus
NCTC 8038]
gi|260668116|gb|EEX55056.1| lipoprotein releasing system [Brucella abortus bv. 4 str. 292]
gi|260672053|gb|EEX58874.1| lipoprotein releasing system [Brucella abortus bv. 2 str. 86/8/59]
gi|260674683|gb|EEX61504.1| lipoprotein releasing system [Brucella abortus bv. 6 str. 870]
gi|260873130|gb|EEX80199.1| lipoprotein releasing system protein [Brucella abortus bv. 9 str.
C68]
Length = 437
Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats.
Identities = 113/266 (42%), Positives = 163/266 (61%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE ++AWRYL + R+ FIS+ + SF G+M+GV LI+VM+VMNGFR +++ R+LG
Sbjct: 24 FSAFERMIAWRYLRARRRETFISVIAGFSFTGIMLGVATLIIVMAVMNGFRAELLTRILG 83
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
INGH+++Q PL DY + R+D IP + +P V GQA V G G+G LVRG+
Sbjct: 84 INGHLIMQPIDRPLDDYADLIKRVDAIPGIKFAIPVVEGQALVQGNIGAGTGALVRGLRE 143
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D L+ S FD GV IG +A NLG+S+GD + ++SP GDVTP G+
Sbjct: 144 EDLDKLKLISSNIRQGTLKGFDHSGGVAIGTRMAENLGLSVGDTLRVISPDGDVTPFGVN 203
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K+Y ++ +F + +YD+ +V M L EAQL+FN E V +E+FV +PD ++
Sbjct: 204 PRVKAYPIVAIFEIGMSEYDSSIVMMPLSEAQLFFNQEGKVQSLEIFVDNPDKVDAMRAP 263
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + ++DW+QR Q FFS E
Sbjct: 264 VEEAAARQLSLVDWRQRNQTFFSALE 289
>gi|192291647|ref|YP_001992252.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Rhodopseudomonas palustris TIE-1]
gi|192285396|gb|ACF01777.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Rhodopseudomonas palustris TIE-1]
Length = 422
Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats.
Identities = 104/266 (39%), Positives = 159/266 (59%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE +++ RYL + R+ FIS+ + SF+G+M+GV LI+VM+VMNGFR++++ ++LG
Sbjct: 10 FAPFEWLISGRYLRARRREGFISVIAGFSFLGIMLGVATLIIVMAVMNGFRKELLDKILG 69
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGH+++Q PL D++ +A+RL + + P V GQA S SGV VRGI
Sbjct: 70 LNGHLLVQPLESPLTDWKDVADRLSGVQGIKLAAPVVDGQALASSPF-NASGVFVRGIRA 128
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D + L + + FD +GV IG+ LA L + GD I +++P G VTPMG
Sbjct: 129 DDLNRLSSIANHLKQGTLEGFDDSQGVAIGRRLADQLSLHAGDSITLVAPRGAVTPMGTT 188
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K Y V +F + +YD+ V+M L+EAQ YFN N V+ IEV+ +PD I+ +
Sbjct: 189 PRIKPYKVAAVFEIGMSEYDSTFVFMPLKEAQAYFNRANDVTAIEVYTDNPDRIDVFRKA 248
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ G V ++DW+QR FF+ +
Sbjct: 249 VTEAAGRPVFLVDWRQRNSTFFNALQ 274
>gi|53803223|ref|YP_115028.1| lipoprotein ABC transporter permease LolE [Methylococcus capsulatus
str. Bath]
gi|53756984|gb|AAU91275.1| lipoprotein ABC transporter, permease protein LolE [Methylococcus
capsulatus str. Bath]
Length = 415
Score = 169 bits (426), Expect = 5e-40, Method: Composition-based stats.
Identities = 72/268 (26%), Positives = 131/268 (48%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+ FIS + S +G+ +GV ALI V+SVMNGF ++ +R+L
Sbjct: 1 MFKPLVLYIGLRYTRAKRRTRFISFITLTSVLGIALGVTALITVLSVMNGFEAELRERIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I L D++ + L ++ P++ GQA +S +L +
Sbjct: 61 GMTSHASISGPGGTLGDWRVLEPALSEDKRILGWAPYIEGQAMLSSERRASGAMLRGILP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G + + G+I+G +LA LG+S GDK+ +++P TP G+
Sbjct: 121 EYEPRVSDVANHMQLGKLGDLAPGQFGIILGAELAAYLGVSSGDKVTVITPQVTATPAGI 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV+G F++ +YD + + L++A ++E +SG+ + + D +
Sbjct: 181 LPRLKRFTVIGTFQVGMFEYDRNLALIQLEDAARLLHMEGEISGLRLKLDDLFNAHRIAR 240
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYES 270
++ L V DW Q + FF ++
Sbjct: 241 DLGPKLPGDYYVTDWTQAHTNFFRAIKT 268
>gi|86749716|ref|YP_486212.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Rhodopseudomonas palustris HaA2]
gi|86572744|gb|ABD07301.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Rhodopseudomonas palustris HaA2]
Length = 426
Score = 169 bits (426), Expect = 5e-40, Method: Composition-based stats.
Identities = 102/266 (38%), Positives = 163/266 (61%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE +++ RYL + R+ FIS+ + SF+G+M+GV LI+VM+VMNGFR++++ ++LG
Sbjct: 14 FAPFEWLLSGRYLRARRREGFISVIAGFSFLGIMLGVATLIIVMAVMNGFRKELLDKILG 73
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGH+++Q PL D++ +A+R+ + + P + GQA S SGVLVRGI
Sbjct: 74 LNGHLLVQPLESPLTDWKEVADRISGVAGIKLAAPVIDGQALASSPF-NASGVLVRGIRA 132
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D + L + + + FD G+GV IG+ LA L + GD + +++P G VTPMG
Sbjct: 133 DDLNNLSSIANHIKQGTLDGFDEGQGVAIGRRLADQLSLHAGDSVTLVAPRGAVTPMGTT 192
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K Y + +F + +YD+ V+M L+EAQ YFN N V+ IEV+ +PD I+ ++
Sbjct: 193 PRIKPYKIAAVFEIGMSEYDSTFVFMPLKEAQAYFNRNNDVTAIEVYTTNPDRIDAFRKS 252
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ G V ++DW+QR FF+ +
Sbjct: 253 VTEAAGRPVFLVDWRQRNSTFFNALQ 278
>gi|241204107|ref|YP_002975203.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240857997|gb|ACS55664.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 434
Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats.
Identities = 114/266 (42%), Positives = 164/266 (61%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE +VAWRYL + RK AFIS+ + SF+G+M+GV LI+VM+VMNGFR +++ R+LG
Sbjct: 21 FSTFERLVAWRYLRARRKEAFISVIAGFSFVGIMLGVATLIIVMAVMNGFRTELVSRILG 80
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
INGH+++Q P DY ++++L +P V LP V GQ S + G +G LVRG
Sbjct: 81 INGHMIVQPVDGPFTDYPVLSSKLAAVPGVKMALPLVEGQVLASAQAGGSTGALVRGARA 140
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D + L+ + G+GV+IG +A LG+ +GD I + SP GD+TPMG+
Sbjct: 141 EDLTKLKTISDNIKSGDMVGYASGQGVLIGTRMADQLGLRVGDLITLTSPDGDITPMGVS 200
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R KSY + G+F + +YD+ +++M L+EAQLYFN E V IE+FV PD I+
Sbjct: 201 PRIKSYKISGLFEIGMSEYDSSIIFMPLEEAQLYFNAEGLVQSIELFVDHPDDIDNLRPK 260
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ G + + DW+QR Q FFS +
Sbjct: 261 VEEAAGRQIAITDWRQRNQTFFSALQ 286
>gi|39935992|ref|NP_948268.1| lipoprotein releasing system transmembrane protein LolC/E family
[Rhodopseudomonas palustris CGA009]
gi|39649846|emb|CAE28368.1| possible ABC type permease; lipoprotein releasing factor
[Rhodopseudomonas palustris CGA009]
Length = 426
Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats.
Identities = 104/266 (39%), Positives = 159/266 (59%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE +++ RYL + R+ FIS+ + SF+G+M+GV LI+VM+VMNGFR++++ ++LG
Sbjct: 14 FAPFEWLISGRYLRARRREGFISVIAGFSFLGIMLGVATLIIVMAVMNGFRKELLDKILG 73
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGH+++Q PL D++ +A+RL + + P V GQA S SGV VRGI
Sbjct: 74 LNGHLLVQPLESPLTDWKDVADRLSGVQGIKLAAPVVDGQALASSPF-NASGVFVRGIRA 132
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D + L + + FD +GV IG+ LA L + GD I +++P G VTPMG
Sbjct: 133 DDLNRLSSIANHLKQGTLEGFDDSQGVAIGRRLADQLSLHAGDSITLVAPRGAVTPMGTT 192
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K Y V +F + +YD+ V+M L+EAQ YFN N V+ IEV+ +PD I+ +
Sbjct: 193 PRIKPYKVAAVFEIGMSEYDSTFVFMPLKEAQAYFNRANDVTAIEVYTDNPDRIDVFRKA 252
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ G V ++DW+QR FF+ +
Sbjct: 253 VTEAAGRPVFLVDWRQRNSTFFNALQ 278
>gi|239831705|ref|ZP_04680034.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Ochrobactrum intermedium LMG 3301]
gi|239823972|gb|EEQ95540.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Ochrobactrum intermedium LMG 3301]
Length = 438
Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats.
Identities = 112/266 (42%), Positives = 163/266 (61%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE ++AWRYL + R+ FIS+ + SF G+M+GV LI+VM+VMNGFR +++ R+LG
Sbjct: 25 FSAFERMIAWRYLRARRRETFISVIAGFSFTGIMLGVATLIIVMAVMNGFRAELLSRILG 84
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
INGH+++Q PL DY + R+D I + +P V GQA V G G+G L+RG+
Sbjct: 85 INGHLIMQPIDRPLDDYADLIKRIDGISGIRFAIPVVEGQALVQGNIGAGNGALIRGLRE 144
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D L+ FD+ GV IG +A NLG+SIGD + ++SP GDVTP G+
Sbjct: 145 EDLDKLKLVSGNIRQGTLQGFDQAGGVAIGTRMAENLGLSIGDTLRVISPDGDVTPFGVN 204
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K+Y ++ +F + +YD+ +V M L EAQL+FN E V +E+FV +PD ++
Sbjct: 205 PRVKAYPIVAIFEIGMSEYDSSIVMMPLSEAQLFFNQEGKVQSLEIFVDNPDKVDAMRAP 264
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ G + ++DW+QR Q FFS E
Sbjct: 265 VEEAAGRQLSLVDWRQRNQTFFSALE 290
>gi|225627318|ref|ZP_03785355.1| lipoprotein releasing system, transmembrane protein, LolC/E family
protein [Brucella ceti str. Cudo]
gi|260168556|ref|ZP_05755367.1| Bacterial general secretion pathway protein H [Brucella sp. F5/99]
gi|261758029|ref|ZP_06001738.1| bacterial general secretion pathway protein H [Brucella sp. F5/99]
gi|225617323|gb|EEH14368.1| lipoprotein releasing system, transmembrane protein, LolC/E family
protein [Brucella ceti str. Cudo]
gi|261738013|gb|EEY26009.1| bacterial general secretion pathway protein H [Brucella sp. F5/99]
Length = 437
Score = 168 bits (424), Expect = 7e-40, Method: Composition-based stats.
Identities = 113/266 (42%), Positives = 163/266 (61%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE ++AWRYL + R+ FIS+ + SF G+M+GV LI+VM+VMNGFR +++ R+LG
Sbjct: 24 FSAFERMIAWRYLRARRRETFISVIAGFSFTGIMLGVATLIIVMAVMNGFRAELLMRILG 83
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
INGH+++Q PL DY + R+D IP + +P V GQA V G G+G LVRG+
Sbjct: 84 INGHLIMQPIDRPLDDYADLIKRVDAIPGIKFAIPVVEGQALVQGNIGAGTGALVRGLRE 143
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D L+ S FD GV IG +A NLG+S+GD + ++SP GDVTP G+
Sbjct: 144 EDLDKLKLISSNIRQGTLKGFDHSGGVAIGTRMAENLGLSVGDTLRVISPDGDVTPFGVN 203
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K+Y ++ +F + +YD+ +V M L EAQL+FN E V +E+FV +PD ++
Sbjct: 204 PRVKAYPIVAIFEIGMSEYDSSIVMMPLSEAQLFFNQEGKVQSLEIFVDNPDKVDAMRAP 263
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + ++DW+QR Q FFS E
Sbjct: 264 VEEAAARQLSLVDWRQRNQTFFSALE 289
>gi|254718930|ref|ZP_05180741.1| Bacterial general secretion pathway protein H [Brucella sp. 83/13]
gi|265983917|ref|ZP_06096652.1| lipoprotein releasing system [Brucella sp. 83/13]
gi|306838839|ref|ZP_07471670.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Brucella sp. NF 2653]
gi|264662509|gb|EEZ32770.1| lipoprotein releasing system [Brucella sp. 83/13]
gi|306406123|gb|EFM62371.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Brucella sp. NF 2653]
Length = 437
Score = 168 bits (424), Expect = 7e-40, Method: Composition-based stats.
Identities = 112/266 (42%), Positives = 163/266 (61%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE ++AWRYL + R+ FIS+ + SF G+M+GV LI+VM+VMNGFR +++ R+LG
Sbjct: 24 FSAFERMIAWRYLRARRRETFISVIAGFSFTGIMLGVATLIIVMAVMNGFRAELLTRILG 83
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
INGH+++Q PL DY + R+D IP + +P V GQA V G G+G LVRG+
Sbjct: 84 INGHLIMQPIDRPLDDYADLIKRVDAIPGIKFAIPVVEGQALVQGNIGAGTGALVRGLRE 143
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D L+ + FD GV IG +A NLG+S+GD + ++SP GDVTP G+
Sbjct: 144 EDLDKLKLISTNIRQGTLKGFDHSGGVAIGTRMAENLGLSVGDTLRVISPDGDVTPFGVN 203
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K+Y ++ +F + +YD+ +V M L EAQL+FN E V +E+FV +PD ++
Sbjct: 204 PRVKAYPIVAIFEIGMSEYDSSIVMMPLSEAQLFFNQEGKVQSLEIFVDNPDKVDAMRAP 263
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + ++DW+QR Q FFS E
Sbjct: 264 VEEAAARQLSLVDWRQRNQTFFSALE 289
>gi|299135008|ref|ZP_07028199.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Afipia sp. 1NLS2]
gi|298589985|gb|EFI50189.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Afipia sp. 1NLS2]
Length = 422
Score = 168 bits (424), Expect = 7e-40, Method: Composition-based stats.
Identities = 101/266 (37%), Positives = 161/266 (60%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE +++ RYL + RK FIS+ + SF+G+M+GV LI+VM+VMNGFR++++ ++LG
Sbjct: 10 FAPFEWLISARYLRARRKEGFISVIAGFSFLGIMLGVATLIIVMAVMNGFRKELLDKILG 69
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGH+++Q PL D++ +A+R++ + + P V GQA S SGVLVRGI
Sbjct: 70 LNGHLLVQPLESPLTDWKEVADRINGVQGIRLAAPIVEGQALASSPF-NASGVLVRGIRA 128
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+D L + FD G+GV IG+ LA L + GD + +++P G VTPMG
Sbjct: 129 ADLEKLTSISKNIKQGTLEGFDDGQGVAIGRRLADLLSLHAGDTVTLVAPRGAVTPMGTT 188
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K Y V +F + +YD+ V+M L+EAQ YFN N V+ IE++ +PD +++ +
Sbjct: 189 PRIKPYKVAAVFEIGMSEYDSSFVFMPLKEAQAYFNRPNDVTAIEIYTDNPDKVDEYRKA 248
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + ++DW+QR FF+ +
Sbjct: 249 VAEAAQRPIFMVDWRQRNSTFFNALQ 274
>gi|254448002|ref|ZP_05061466.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[gamma proteobacterium HTCC5015]
gi|198262428|gb|EDY86709.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[gamma proteobacterium HTCC5015]
Length = 416
Score = 168 bits (424), Expect = 7e-40, Method: Composition-based stats.
Identities = 72/269 (26%), Positives = 132/269 (49%), Gaps = 1/269 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F FE+ + RY + R+N FIS S IS +G+ +GV ALI V+SVMNGF ++ +R+L
Sbjct: 1 MFQPFELFIGLRYTRAKRRNHFISFISLISILGIALGVWALITVISVMNGFESELRERIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I + D+ + + + P+VI P+V Q + + +
Sbjct: 61 GMTSHATISAYNGAMRDWDSVIQQAETHPEVIGAAPYVESQLMLLKGGEVNGAIARGVLP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G+ + +++G +LAR L + + DK+ ++SP ++T G
Sbjct: 121 QQERKVADVEDKMVVGSFDSLKAGEWNIVLGSELARALRLRLFDKVTVVSPQTNITAAGF 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
R K++T+ G+F + +YD+G+V++ +A + V+G+ + + D +
Sbjct: 181 IPRLKTFTLTGVFELGMNEYDSGLVFLHAADAGKLMRMPEGGVTGVRLKLTDMFEAGRIG 240
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYES 270
E + +G V DW QR+ FF ++
Sbjct: 241 EEVANEVGEQYWVSDWTQRHANFFKAIKT 269
>gi|92117719|ref|YP_577448.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Nitrobacter hamburgensis X14]
gi|91800613|gb|ABE62988.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Nitrobacter hamburgensis X14]
Length = 426
Score = 168 bits (424), Expect = 8e-40, Method: Composition-based stats.
Identities = 104/266 (39%), Positives = 162/266 (60%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE +++ RYL + RK FIS+ + SF+G+M+GV LI+VM+VMNGFR +++ ++LG
Sbjct: 14 FAAFEWMLSGRYLRARRKEGFISVIAGFSFLGIMLGVATLIIVMAVMNGFRTELLSKILG 73
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGH+++Q PL D++ +A+R+ +P + P V GQA S +GV VRGI
Sbjct: 74 LNGHLLVQPLESPLTDWKDVADRISQVPGIRLAAPVVDGQALASSPY-NAAGVFVRGIRA 132
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+D + L + + FD G+GV IG+ LA L + GD I +++P G VTPMG
Sbjct: 133 ADLNNLTSIAKNIKQGTLDGFDDGQGVAIGRRLADQLSLHAGDSITLVAPRGAVTPMGTT 192
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K Y V +F + +YD+ V+M L EAQ YFN N V+ IE++ +PD I++ ++
Sbjct: 193 PRIKPYKVAAVFEIGMSEYDSTFVFMPLAEAQAYFNRANDVTAIEIYTDNPDKIDEFRKS 252
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ G V ++DW+QR FF+ +
Sbjct: 253 VTEAAGRPVFLVDWRQRNSTFFNALQ 278
>gi|88810799|ref|ZP_01126056.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Nitrococcus mobilis Nb-231]
gi|88792429|gb|EAR23539.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Nitrococcus mobilis Nb-231]
Length = 415
Score = 168 bits (424), Expect = 8e-40, Method: Composition-based stats.
Identities = 76/268 (28%), Positives = 130/268 (48%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F ++ + RY + R+N F+S S S +G+ +GV ALI V+SVMNGF ++ +R+L
Sbjct: 1 MFRPLQLYIGLRYTKAKRRNHFVSFISLTSMLGIAVGVTALITVLSVMNGFEHELRERIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H + PL +Q + L P V P+VSG+ ++ S+ ++ +
Sbjct: 61 GMVAHATVASFAGPLDHWQALTRDLREQPYVEGAAPYVSGEVMLTRGSAVTGALVRGILP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S Q G VS+ G+I+G LAR LG+ +GD I +++P ++ G+
Sbjct: 121 AEEPSVSQVLDKVVAGRVSDLKPGTFGIILGGGLARALGVEVGDDITVVTPEARISVAGI 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + + V+ +F + YD + M L +A+L F V+GI + D A +
Sbjct: 181 LPRIRRFHVVALFEVDMSQYDRSLALMHLDDARLLFRTGKGVTGIRLRFDDLLAAPRLAR 240
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYES 270
L V DW ++ + FF +
Sbjct: 241 KAAAHLPGFYRVSDWTEQNRNFFRAVST 268
>gi|222148296|ref|YP_002549253.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
gi|221735284|gb|ACM36247.1| ABC transporter membrane spanning protein [Agrobacterium vitis S4]
Length = 435
Score = 168 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 118/266 (44%), Positives = 164/266 (61%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE +VAWRYL + RK A IS+ + SF+G+M+GV LI+VM+VMNGFR ++I R+LG
Sbjct: 22 FSAFERMVAWRYLRARRKEAVISVIAGFSFVGIMLGVATLIIVMAVMNGFRTELISRILG 81
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
INGH+++Q P D+ +A + +P V LP V GQ SG G+G LVRGI
Sbjct: 82 INGHMIVQPVDSPFTDFADLAKKFSAVPGVTMALPLVEGQTLASGKGGAGTGALVRGIRP 141
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D L+ + F G+GV+IG +A +LG+ GD I ++SP GDVTPMG+
Sbjct: 142 DDLLKLKEVAANIKTGDMVGFTSGQGVLIGSRMANDLGLQAGDSITLVSPEGDVTPMGVN 201
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R KSY + G F + +YD+ ++YM L+E+QLYFN E V IE+FV +PD I++
Sbjct: 202 PRVKSYKISGTFEIGMSEYDSSIIYMPLEESQLYFNAEGVVQSIELFVTNPDDIDELRPK 261
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ G V + DW+QR Q FFS +
Sbjct: 262 VEAAAGRQVFISDWRQRNQTFFSALQ 287
>gi|23501710|ref|NP_697837.1| ABC transporter permease [Brucella suis 1330]
gi|161618787|ref|YP_001592674.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Brucella canis ATCC 23365]
gi|163843096|ref|YP_001627500.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Brucella suis ATCC 23445]
gi|225852337|ref|YP_002732570.1| lipoprotein releasing system, transmembrane protein, LolC/E family
protein [Brucella melitensis ATCC 23457]
gi|23347634|gb|AAN29752.1| ABC transporter, permease protein [Brucella suis 1330]
gi|161335598|gb|ABX61903.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Brucella canis ATCC 23365]
gi|163673819|gb|ABY37930.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Brucella suis ATCC 23445]
gi|225640702|gb|ACO00616.1| lipoprotein releasing system, transmembrane protein, LolC/E family
protein [Brucella melitensis ATCC 23457]
gi|326408845|gb|ADZ65910.1| lipoprotein releasing system, transmembrane protein, LolC/E family
protein [Brucella melitensis M28]
gi|326538560|gb|ADZ86775.1| lipoprotein releasing system, transmembrane protein, LolC/E family
protein [Brucella melitensis M5-90]
Length = 422
Score = 168 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 113/266 (42%), Positives = 163/266 (61%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE ++AWRYL + R+ FIS+ + SF G+M+GV LI+VM+VMNGFR +++ R+LG
Sbjct: 9 FSAFERMIAWRYLRARRRETFISVIAGFSFTGIMLGVATLIIVMAVMNGFRAELLTRILG 68
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
INGH+++Q PL DY + R+D IP + +P V GQA V G G+G LVRG+
Sbjct: 69 INGHLIMQPIDRPLDDYADLIKRVDAIPGIKFAIPVVEGQALVQGNIGAGTGALVRGLRE 128
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D L+ S FD GV IG +A NLG+S+GD + ++SP GDVTP G+
Sbjct: 129 EDLDKLKLISSNIRQGTLKGFDHSGGVAIGTRMAENLGLSVGDTLRVISPDGDVTPFGVN 188
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K+Y ++ +F + +YD+ +V M L EAQL+FN E V +E+FV +PD ++
Sbjct: 189 PRVKAYPIVAIFEIGMSEYDSSIVMMPLSEAQLFFNQEGKVQSLEIFVDNPDKVDAMRAP 248
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + ++DW+QR Q FFS E
Sbjct: 249 VEEAAARQLSLVDWRQRNQTFFSALE 274
>gi|17987422|ref|NP_540056.1| lipoprotein releasing system transmembrane protein LOLE [Brucella
melitensis bv. 1 str. 16M]
gi|17983113|gb|AAL52320.1| lipoprotein releasing system transmembrane protein lole [Brucella
melitensis bv. 1 str. 16M]
Length = 422
Score = 168 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 112/266 (42%), Positives = 163/266 (61%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE ++AWRYL + R+ FIS+ + SF G+M+GV LI+VM+VMNGFR +++ R+LG
Sbjct: 9 FSAFERMIAWRYLRARRRETFISVIAGFSFTGIMLGVATLIIVMAVMNGFRAELLTRILG 68
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
INGH+++Q PL DY + R++ IP + +P V GQA V G G+G LVRG+
Sbjct: 69 INGHLIMQPIDRPLDDYADLIKRVNAIPGIKFAIPVVEGQALVQGNIGAGTGALVRGLRE 128
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D L+ S FD GV IG +A NLG+S+GD + ++SP GDVTP G+
Sbjct: 129 EDLDKLKLISSNIRQGTLKGFDHSGGVAIGTRMAENLGLSVGDTLRVISPDGDVTPFGVN 188
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K+Y ++ +F + +YD+ +V M L EAQL+FN E V +E+FV +PD ++
Sbjct: 189 PRVKAYPIVAIFEIGMSEYDSSIVMMPLSEAQLFFNQEGKVQSLEIFVDNPDKVDAMRAP 248
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + ++DW+QR Q FFS E
Sbjct: 249 VEEAAARQLSLVDWRQRNQTFFSALE 274
>gi|227821638|ref|YP_002825608.1| ABC transporter, membrane spanning protein [Sinorhizobium fredii
NGR234]
gi|227340637|gb|ACP24855.1| ABC transporter, membrane spanning protein [Sinorhizobium fredii
NGR234]
Length = 436
Score = 168 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 118/266 (44%), Positives = 161/266 (60%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE +VAWRYL S RK AFIS+ + SFIG+M+GV LI+VM+VMNGFR ++I R+LG
Sbjct: 23 FSAFERMVAWRYLRSRRKEAFISVIAGFSFIGIMLGVATLIIVMAVMNGFRTELISRILG 82
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGHV++Q PL +Y +A + +P V +P V GQ G+ +G LVRG+
Sbjct: 83 MNGHVIVQPLDGPLTNYAELATKFSAVPGVTMAIPMVEGQVLAQGIGDASTGALVRGLRA 142
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D L++ F G GV IG +A LGI +G I + SP GDVTP+GM
Sbjct: 143 EDLMKLKSISEHIQSGDLVGFASGAGVAIGSRMAEQLGIRVGGTITLTSPNGDVTPLGMN 202
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K+YTV +F M +YD +++M L+EAQLYFN E V IE+FV+ PD+++ +
Sbjct: 203 PRVKAYTVSAIFEMGMSEYDATIIFMPLEEAQLYFNAEGLVQSIELFVEQPDSVDDLRKP 262
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
I G V + DW+ R + FFS E
Sbjct: 263 IEDAAGRQVYLTDWRDRNRTFFSALE 288
>gi|90423928|ref|YP_532298.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Rhodopseudomonas palustris BisB18]
gi|90105942|gb|ABD87979.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Rhodopseudomonas palustris BisB18]
Length = 426
Score = 168 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 106/266 (39%), Positives = 161/266 (60%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE +++ RYL + RK FIS+ + SF+G+M+GV LI+VM+VMNGFR++++ ++LG
Sbjct: 14 FAPFEWLLSGRYLRARRKEGFISVIAGFSFLGIMLGVATLIIVMAVMNGFRKELLDKILG 73
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGH+++Q PL D++ +A R++ + + P V GQA S SGVLVRG+
Sbjct: 74 LNGHLLVQPLESPLTDWKDVAERINGVAGIRLAAPVVDGQALASSPF-NASGVLVRGMRA 132
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D + L + FD G+GV IG+ LA L + GD I +++P G VTPMG
Sbjct: 133 DDLNNLTSIAKNIKQGTLEGFDEGQGVAIGRRLADQLSLHAGDSITLVAPRGAVTPMGTT 192
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K Y V +F + +YD+G V+M L EAQ YFN + V+ IEVF +PD I+ ++
Sbjct: 193 PRIKPYKVTAVFEIGMSEYDSGFVFMPLPEAQAYFNRASDVTAIEVFTNNPDKIDAFRKS 252
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ G V ++DW+QR FF+ +
Sbjct: 253 VTEAAGRPVFLVDWRQRNSTFFNALQ 278
>gi|62289772|ref|YP_221565.1| ABC transporter permease [Brucella abortus bv. 1 str. 9-941]
gi|82699700|ref|YP_414274.1| general secretion pathway protein H [Brucella melitensis biovar
Abortus 2308]
gi|297248175|ref|ZP_06931893.1| lipoprotein-releasing system permease [Brucella abortus bv. 5 str.
B3196]
gi|62195904|gb|AAX74204.1| ABC transporter, permease protein [Brucella abortus bv. 1 str.
9-941]
gi|82615801|emb|CAJ10799.1| Bacterial general secretion pathway protein H:Protein of unknown
function DUF214 [Brucella melitensis biovar Abortus
2308]
gi|297175344|gb|EFH34691.1| lipoprotein-releasing system permease [Brucella abortus bv. 5 str.
B3196]
Length = 422
Score = 168 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 113/266 (42%), Positives = 163/266 (61%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE ++AWRYL + R+ FIS+ + SF G+M+GV LI+VM+VMNGFR +++ R+LG
Sbjct: 9 FSAFERMIAWRYLRARRRETFISVIAGFSFTGIMLGVATLIIVMAVMNGFRAELLTRILG 68
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
INGH+++Q PL DY + R+D IP + +P V GQA V G G+G LVRG+
Sbjct: 69 INGHLIMQPIDRPLDDYADLIKRVDAIPGIKFAIPVVEGQALVQGNIGAGTGALVRGLRE 128
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D L+ S FD GV IG +A NLG+S+GD + ++SP GDVTP G+
Sbjct: 129 EDLDKLKLISSNIRQGTLKGFDHSGGVAIGTRMAENLGLSVGDTLRVISPDGDVTPFGVN 188
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K+Y ++ +F + +YD+ +V M L EAQL+FN E V +E+FV +PD ++
Sbjct: 189 PRVKAYPIVAIFEIGMSEYDSSIVMMPLSEAQLFFNQEGKVQSLEIFVDNPDKVDAMRAP 248
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + ++DW+QR Q FFS E
Sbjct: 249 VEEAAARQLSLVDWRQRNQTFFSALE 274
>gi|256369254|ref|YP_003106762.1| ABC transporter, permease protein [Brucella microti CCM 4915]
gi|255999414|gb|ACU47813.1| ABC transporter, permease protein [Brucella microti CCM 4915]
Length = 422
Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 113/266 (42%), Positives = 163/266 (61%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE ++AWRYL + R+ FIS+ + SF G+M+GV LI+VM+VMNGFR +++ R+LG
Sbjct: 9 FSAFERMIAWRYLRARRRETFISVIAGFSFTGIMLGVATLIIVMAVMNGFRAELLTRILG 68
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
INGH+++Q PL DY + R+D IP + +P V GQA V G G+G LVRG+
Sbjct: 69 INGHLIMQPIDRPLDDYADLIKRVDAIPGIKFAIPVVEGQALVQGNIGAGTGALVRGLRE 128
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D L+ S FD GV IG +A NLG+S+GD + ++SP GDVTP G+
Sbjct: 129 EDLDKLKLISSNIRQGTLKGFDHSGGVAIGTRMAENLGLSVGDTLRVISPDGDVTPFGVN 188
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K+Y ++ +F + +YD+ +V M L EAQL+FN E V +E+FV +PD ++
Sbjct: 189 PRVKAYPIVAIFEIGMSEYDSSIVMMPLSEAQLFFNQEGKVQSLEIFVDNPDKVDAMRAL 248
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + ++DW+QR Q FFS E
Sbjct: 249 VEEAAARQLSLVDWRQRNQTFFSALE 274
>gi|327194828|gb|EGE61662.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Rhizobium etli CNPAF512]
Length = 434
Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 115/266 (43%), Positives = 164/266 (61%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE +VAWRYL + RK AFIS+ + SF+G+M+GV LI+VM+VMNGFR +++ R+LG
Sbjct: 21 FSTFERLVAWRYLRARRKEAFISVIAGFSFVGIMLGVATLIIVMAVMNGFRTELVSRILG 80
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
INGH+++Q P DY + +RL +P V LP V GQ S + G +G LVRG
Sbjct: 81 INGHMIVQPSDGPFTDYADLTSRLAAVPGVKMALPLVEGQVLASAQAGGSTGALVRGARA 140
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D + L+ F G+GV+IG +A LG+S+GD I + SP GD+TPMG+
Sbjct: 141 EDLTKLKTISGNIKSGDMVGFASGQGVLIGTGMATQLGLSVGDLITLTSPDGDITPMGVS 200
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R KSY + G+F + +YD+ +++M L+E+QL+FN E V IE+FV PD I+
Sbjct: 201 PRVKSYKISGLFEIGMSEYDSSIIFMPLEESQLFFNAEGLVQSIELFVDHPDDIDALRSK 260
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ G + + DW+QR Q FFS +
Sbjct: 261 VEEAAGRQINLTDWRQRNQTFFSALQ 286
>gi|115524552|ref|YP_781463.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Rhodopseudomonas palustris BisA53]
gi|115518499|gb|ABJ06483.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Rhodopseudomonas palustris BisA53]
Length = 426
Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 103/266 (38%), Positives = 159/266 (59%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE +++ RYL + RK FIS+ + SF+G+M+GV LI+VM+VMNGFR++++ ++LG
Sbjct: 14 FAPFEWLLSGRYLRARRKEGFISVIAGFSFLGIMLGVATLIIVMAVMNGFRKELLDKILG 73
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGH+++Q PL D++ +A+R++ + V P V GQA S SGV VRGI
Sbjct: 74 LNGHLLVQPLESPLTDWKDVADRINGVSGVRLAAPVVDGQALASSPF-NASGVFVRGIRA 132
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D + L + F+ G+GV IG+ LA L + GD + +++P G VTPMG
Sbjct: 133 EDLNNLTSIAKNLKQGTIEGFNEGQGVAIGRRLADQLSLHAGDSVTLVAPRGAVTPMGTT 192
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K Y V +F + +YD+ V+M L EAQ YFN + V+ IEV+ +PD I+ +
Sbjct: 193 PRIKPYKVAAVFEIGMSEYDSTFVFMPLAEAQAYFNRASDVTAIEVYTTNPDKIDSFRKL 252
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ G V ++DW+QR FF+ +
Sbjct: 253 VTEAAGRPVFLVDWRQRNSTFFNALQ 278
>gi|75676055|ref|YP_318476.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Nitrobacter winogradskyi Nb-255]
gi|74420925|gb|ABA05124.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Nitrobacter winogradskyi Nb-255]
Length = 426
Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 102/266 (38%), Positives = 158/266 (59%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE +++ RYL + RK FIS+ + SF+G+M+GV LI+VM+VMNGFR +++ ++LG
Sbjct: 14 FAAFEWMLSGRYLRARRKEGFISVIAGFSFLGIMLGVATLIIVMAVMNGFRTELLSKILG 73
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGH+++Q PL D++ +A R+ + + P V GQA S +GV VRGI
Sbjct: 74 LNGHLLVQPLESPLTDWKEVAERVSQVKGIRLAAPVVDGQALGSSPY-NAAGVFVRGIRA 132
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D + L + + FD G+GV IG+ LA L + GD + +++P G VTPMG
Sbjct: 133 DDLNNLTSIARNIKQGTLDGFDEGQGVAIGRRLADQLSLHAGDSVTLVAPRGAVTPMGTT 192
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K Y + +F + +YD+ V+M L EAQ YFN N V+ IEV+ +PD I+ ++
Sbjct: 193 PRIKPYKIAAVFEIGMSEYDSTFVFMPLAEAQAYFNRANDVTSIEVYTDNPDKIDDFRKS 252
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ G V ++DW+QR FF+ +
Sbjct: 253 VTEAAGRPVFLVDWRQRNSTFFNALQ 278
>gi|71908449|ref|YP_286036.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Dechloromonas aromatica RCB]
gi|71848070|gb|AAZ47566.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Dechloromonas aromatica RCB]
Length = 415
Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats.
Identities = 81/267 (30%), Positives = 147/267 (55%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +E+++ RY + R+N FIS S IS +G+ +GV ALIVV+SVMNGF++++ R+L
Sbjct: 1 MALPYELLIGLRYTRAKRRNHFISFISLISMLGIGLGVAALIVVLSVMNGFQKELRTRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H+ I L ++Q +A + P+V PFV Q + + ++ +
Sbjct: 61 GVASHIQITGISGELPNWQAVAEQAMKHPEVRASAPFVQSQGMFTVDGTVKGTIVRGILP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + G++ + GV++G DLAR+L + GDK+ +++P G VTP G+
Sbjct: 121 DQEDRVADFRKTIQSGSLDDLRPGEFGVVLGADLARSLRVFTGDKVTLIAPQGTVTPAGV 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R KS+ V+G+F + +YD+G+ ++L++AQ + +E+ VSG+ + V D +
Sbjct: 181 VPRLKSFKVVGIFEVGMYEYDSGLALINLEDAQKLYQMEDRVSGVRLKVDDLFQAPRIAR 240
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+VR + + DW + + FF +
Sbjct: 241 ELVRYIDADAYLNDWTKSHANFFRAVQ 267
>gi|325292652|ref|YP_004278516.1| lipoprotein ABC transporter membrane spanning protein
[Agrobacterium sp. H13-3]
gi|325060505|gb|ADY64196.1| lipoprotein ABC transporter membrane spanning protein
[Agrobacterium sp. H13-3]
Length = 435
Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats.
Identities = 118/266 (44%), Positives = 161/266 (60%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE +VAWRYL S RK AFIS+ + SF+G+M+GV LI+VM+VMNGFR ++I R+LG
Sbjct: 22 FSAFERMVAWRYLRSRRKEAFISVIAGFSFVGIMLGVATLIIVMAVMNGFRTELISRILG 81
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
INGH+++Q P +Y +A + IP V LP V GQ SG GSG LVRG+
Sbjct: 82 INGHMIVQPIDQPFNNYDELAKKFSAIPGVTMALPLVEGQTLASGRGGAGSGALVRGVRQ 141
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D ++ + F G GV++G LA LG++ GD I ++SP GDVTPMG+
Sbjct: 142 DDIDKIKEVATNVKTGDLVGFMAGDGVLVGSRLAAQLGVTAGDDITLISPEGDVTPMGVN 201
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R KSY + G+F + +YD M+YM L EAQLYFN E V IE++V PD ++
Sbjct: 202 PRVKSYKISGVFEIGMSEYDASMIYMPLSEAQLYFNAEGLVQSIELYVSRPDNVDGIRPL 261
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + + DW+QR Q FFS +
Sbjct: 262 VEQAAERQIYITDWRQRNQTFFSALQ 287
>gi|260462252|ref|ZP_05810496.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Mesorhizobium opportunistum WSM2075]
gi|259032112|gb|EEW33379.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Mesorhizobium opportunistum WSM2075]
Length = 428
Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats.
Identities = 113/266 (42%), Positives = 163/266 (61%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE VAWRYL S RK IS+ + ISF+G+M+GV LIVVM+VMNGFR +++ R+LG
Sbjct: 15 FSIFERTVAWRYLRSRRKETVISVIASISFLGIMLGVATLIVVMAVMNGFRAELLTRILG 74
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGH+++Q PL DY +A R++ +P V +P + GQ G GG+G LVRGI
Sbjct: 75 VNGHLIVQPIDSPLEDYAQVAGRINGVPGVKYAIPLIDGQVLAQGNVGGGTGALVRGIRA 134
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D + + DFD G+GV IGK +A NLG+++GD I ++SP GDVTP+G
Sbjct: 135 EDLGKIAIVANNIKQGSLADFDSGEGVAIGKRMAENLGLTLGDTITLISPDGDVTPIGTT 194
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K Y + +F + +YD +VYM EAQLYFN++ IE++V +PD ++
Sbjct: 195 PRMKGYKISAIFEVGMSEYDTSIVYMPFSEAQLYFNMDGRAQTIEIYVDNPDDVDALKPK 254
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + ++DW+QR + FFS +
Sbjct: 255 VEEAAQRPIDMVDWRQRNETFFSALQ 280
>gi|209548883|ref|YP_002280800.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209534639|gb|ACI54574.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 434
Score = 166 bits (419), Expect = 3e-39, Method: Composition-based stats.
Identities = 117/266 (43%), Positives = 165/266 (62%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE +VAWRYL + RK AFIS+ + SF+G+M+GV LI+VM+VMNGFR +++ R+LG
Sbjct: 21 FSTFERLVAWRYLRARRKEAFISVIAGFSFVGIMLGVATLIIVMAVMNGFRTELVSRILG 80
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
INGH+++Q P DY +++RL +P V LP V GQ S + G +G LVRG
Sbjct: 81 INGHMIVQPSDGPFTDYADLSSRLAAVPGVKMALPLVEGQVLASAQAGGSTGALVRGARA 140
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D + L+ F G+GV+IG +A LG+S+GD I + SP GD+TPMG+
Sbjct: 141 EDLTKLKTISGNIKSGDMVGFASGQGVLIGTGMANQLGLSVGDLITLTSPDGDITPMGVS 200
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R KSY + G+F + +YD+ +++M L+EAQLYFN E V IE+FV PD I+
Sbjct: 201 PRVKSYKISGLFEIGMSEYDSSIIFMPLEEAQLYFNAEGLVQSIELFVDHPDDIDTLRPK 260
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ G + + DW+QR Q FFS +
Sbjct: 261 VEEAAGRQINLTDWRQRNQTFFSALQ 286
>gi|82703624|ref|YP_413190.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Nitrosospira multiformis ATCC 25196]
gi|82411689|gb|ABB75798.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Nitrosospira multiformis ATCC 25196]
Length = 414
Score = 166 bits (418), Expect = 4e-39, Method: Composition-based stats.
Identities = 82/266 (30%), Positives = 145/266 (54%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
S +E+ + RY + R+N FIS S IS +G+ +G+ ALI VMSVMNGF++++ R+LG
Sbjct: 1 MSSYELFIGLRYTRAKRRNHFISFISLISLLGITLGMTALITVMSVMNGFQKEVRSRILG 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ H+ + L D++ +A P+V P++S Q VS + + +
Sbjct: 61 VASHIQVSGVEGTLTDWRKVAEEARRHPEVEAAAPYISAQGMVSFDQAVSGVAVRGILPG 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ G + N G++IG++LAR+LG+ GD+I ++SP G VTP G+
Sbjct: 121 MEDHVADLGRMMIDGRLENLAPGEFGIVIGRELARSLGVFTGDRIVLISPQGQVTPAGII 180
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K +T++G+F +YD+G+V + L +AQ + +EN VSG+ + + D +
Sbjct: 181 PRLKQFTIIGIFEAGHFEYDSGLVLIHLADAQKLYRMENQVSGVRLKLHDLFKAPQVARE 240
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+V ++ + V + DW +++ +F +
Sbjct: 241 LVPLISSDVYISDWTRQHANYFRAIQ 266
>gi|254500740|ref|ZP_05112891.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Labrenzia alexandrii DFL-11]
gi|222436811|gb|EEE43490.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Labrenzia alexandrii DFL-11]
Length = 434
Score = 165 bits (417), Expect = 6e-39, Method: Composition-based stats.
Identities = 115/266 (43%), Positives = 165/266 (62%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE ++A RYL S R+ FIS+ + SF G+M+GV LI+VM+VMNGFR +++ ++LG
Sbjct: 22 FAPFEWMIAGRYLRSRRRETFISVIAGFSFAGIMLGVATLIIVMAVMNGFRSELLGKILG 81
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
INGH++IQ PL DY +A RL+ +P+VI +PFV GQA VSG + G LVRG+
Sbjct: 82 INGHMLIQPIDQPLTDYDPVAKRLEGVPEVISAIPFVEGQALVSGPAGNL-GALVRGLKE 140
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
SD + + + FD G+GV IG +A+ LGI++GD + I+SP G VTPMG+
Sbjct: 141 SDLRRIPLVANNLRAGTLDGFDAGQGVAIGSRMAQQLGITLGDNVTIISPRGSVTPMGVT 200
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K+Y V +F + +YD ++M L E+Q YFN++ +GIE++V DPD +
Sbjct: 201 PRVKAYPVTAIFEIGMSEYDATFLFMPLPESQAYFNMDGITTGIELYVVDPDNVGTMLAA 260
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ G V DW+QR FFS E
Sbjct: 261 VEEAAGRPAFVTDWRQRNVTFFSALE 286
>gi|319783001|ref|YP_004142477.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317168889|gb|ADV12427.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 428
Score = 165 bits (416), Expect = 6e-39, Method: Composition-based stats.
Identities = 114/266 (42%), Positives = 165/266 (62%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE +VAWRYL S RK IS+ + ISF+G+M+GV LIVVM+VMNGFR +++ R+LG
Sbjct: 15 FSIFERMVAWRYLRSRRKETVISVIASISFLGIMLGVATLIVVMAVMNGFRAELLTRILG 74
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGH+++Q PL DY +A+R++ + V +P + GQ G GG+G LVRGI
Sbjct: 75 VNGHLIVQPLDSPLEDYAQVASRINGVAGVKYAIPLIDGQVLAQGNVGGGTGALVRGIRG 134
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D S + S DFD G+GV IGK +A NLG+++GD I ++SP GDVTP+G
Sbjct: 135 EDLSKIAIVASNIKQGSIADFDSGEGVAIGKRMAENLGLTLGDTITLISPDGDVTPIGTT 194
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K Y + +F + +YD +VYM EAQLYFN++ IE++V +PD ++
Sbjct: 195 PRMKGYKIAAIFEVGMSEYDTSIVYMPFSEAQLYFNMDGRAQTIEIYVDNPDDVDALKPK 254
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + ++DW+QR + FFS +
Sbjct: 255 VEAAAQRPIDMVDWRQRNETFFSALQ 280
>gi|146341082|ref|YP_001206130.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Bradyrhizobium sp. ORS278]
gi|146193888|emb|CAL77905.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Bradyrhizobium sp. ORS278]
Length = 426
Score = 165 bits (416), Expect = 6e-39, Method: Composition-based stats.
Identities = 101/266 (37%), Positives = 158/266 (59%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE +++ RYL + R+ FIS+ + SF+G+M+GV LI+VM+VMNGFR++++ ++LG
Sbjct: 14 FAPFEWMLSGRYLRARRREGFISVIAGFSFLGIMLGVATLIIVMAVMNGFRKELLDKILG 73
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGH+++Q PL D++ ++ R+ + + P V GQ S SGV +RGI +
Sbjct: 74 LNGHLLVQPLESPLTDWKDVSERISQVQGIRLAAPVVDGQGLGSSPF-NASGVFIRGIRS 132
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D + L + FD G+GV IG+ LA L + GD I +++P G VTPMG
Sbjct: 133 QDLTNLTSIAKNIKQGTLEGFDEGQGVAIGRRLADLLSLHAGDSITLVAPKGAVTPMGTT 192
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K Y V +F + +YD+ V+M L EAQ YFN N V+ IE+F +PD +E+ +
Sbjct: 193 PRIKPYKVAAVFEIGMSEYDSSFVFMPLAEAQAYFNRNNDVTAIEIFTSNPDKVEQFRKT 252
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ G V ++DW+QR FF+ +
Sbjct: 253 VTEAAGRPVFLVDWRQRNSTFFNALQ 278
>gi|163759521|ref|ZP_02166606.1| ABC transporter, membrane spanning protein [Hoeflea phototrophica
DFL-43]
gi|162283118|gb|EDQ33404.1| ABC transporter, membrane spanning protein [Hoeflea phototrophica
DFL-43]
Length = 433
Score = 165 bits (416), Expect = 6e-39, Method: Composition-based stats.
Identities = 122/266 (45%), Positives = 166/266 (62%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE +VAWRYL S RK AFIS+ + SF+G+M+GV LI+VM+VMNGFR ++I R+LG
Sbjct: 20 FSAFERMVAWRYLRSRRKEAFISVIAGFSFVGIMLGVATLIIVMAVMNGFRGELITRILG 79
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
INGH+V+Q PL DY +A R + VI +P V GQ SG+ G+G LVRG+
Sbjct: 80 INGHMVVQPIDRPLDDYAALAARFKGVDGVINAIPLVEGQTLASGVGGAGTGALVRGVRA 139
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
DF ++ F G+GV IG +A++LG++ GD I +++P GDVTP G+
Sbjct: 140 EDFQSMELVSENIRSGDLVGFVAGEGVAIGSRMAQSLGLTAGDLITLVAPEGDVTPFGVT 199
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K+Y V +F + +YD+ ++YM L+EAQLYFN E V IEVFV+DPD I+
Sbjct: 200 PRVKAYPVSAIFEVGMSEYDSSIIYMPLEEAQLYFNSEGVVQSIEVFVEDPDDIDAMRPL 259
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
I V + DW+QR Q FFS +
Sbjct: 260 IEAAADRQVFITDWRQRNQTFFSALQ 285
>gi|307942138|ref|ZP_07657489.1| lipoprotein-releasing system transmembrane protein LolC [Roseibium
sp. TrichSKD4]
gi|307774424|gb|EFO33634.1| lipoprotein-releasing system transmembrane protein LolC [Roseibium
sp. TrichSKD4]
Length = 433
Score = 165 bits (416), Expect = 6e-39, Method: Composition-based stats.
Identities = 116/266 (43%), Positives = 168/266 (63%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE ++A RYL + R++ FIS+ + SF G+M+GV LI+VM+VMNGFR +++ ++LG
Sbjct: 21 FAPFEWMIAGRYLRARRRDTFISVIAGFSFAGIMLGVATLIIVMAVMNGFRSELLGKILG 80
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
INGH+++Q L DY +A RL+ +PDVI +PFV GQA VS SG +G LVRG+S
Sbjct: 81 INGHMLVQPIDMALTDYDPVAKRLEGVPDVISAIPFVEGQALVS-GPSGNTGGLVRGMSE 139
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
++ + + FD G+G+ IG +A+NLG+ +GD I I+SP G+VTPMG+
Sbjct: 140 TNLRRVPLVADNIKSGTLDGFDAGEGIAIGSRMAQNLGLLLGDNITIISPNGNVTPMGVT 199
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R KSY + +F + +YD V+M L EAQ YFN++ +GIEV++ DPD + +
Sbjct: 200 PRVKSYPITAIFEIGMSEYDATFVFMPLTEAQGYFNMDGRATGIEVYIADPDRVGQMVPI 259
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
I V DW+QR Q FFS E
Sbjct: 260 IEDAADRPAFVTDWRQRNQTFFSALE 285
>gi|116751161|ref|YP_847848.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Syntrophobacter fumaroxidans MPOB]
gi|116700225|gb|ABK19413.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Syntrophobacter fumaroxidans MPOB]
Length = 410
Score = 165 bits (416), Expect = 7e-39, Method: Composition-based stats.
Identities = 88/270 (32%), Positives = 143/270 (52%), Gaps = 5/270 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
FE+ V+ RYLF+ R+ FIS+ + IS GV +GV ALIVV++VMNGF+ED+ R+LG+
Sbjct: 1 MNFELFVSLRYLFAKRRQTFISLITLISIAGVAVGVTALIVVLAVMNGFQEDLRNRILGV 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
HVV+ + +Y + +++ P V+ PFV Q ++ +L S
Sbjct: 61 TSHVVVGSLTGAMNNYPDVIAKVEKEPGVVAAAPFVYSQVMLTSGRGISGAILRGIDPLS 120
Query: 125 DFSYLQNSFSR-----FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
++ + + D D +I+G +LA NLG+ GD + ++SP G +TP
Sbjct: 121 ASKVIRLQENMIGNLADLSSPRGDADAPPAIILGSELAGNLGVRTGDWVTMISPTGRLTP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
MG +SK + V+GM + +YDN +VY+ L AQ + + + V+G+E+ ++D K
Sbjct: 181 MGQTPKSKLFQVVGMLQSGMYEYDNTLVYVDLPAAQQFLGIGDTVTGVEIRLQDIYEAAK 240
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
E++ LG DW Q + FS +
Sbjct: 241 VSESLRERLGAPYWARDWMQMNRSLFSALK 270
>gi|85717004|ref|ZP_01047967.1| lipoprotein releasing system, transmembrane protein, LolC/E family
protein [Nitrobacter sp. Nb-311A]
gi|85696206|gb|EAQ34101.1| lipoprotein releasing system, transmembrane protein, LolC/E family
protein [Nitrobacter sp. Nb-311A]
Length = 426
Score = 165 bits (416), Expect = 7e-39, Method: Composition-based stats.
Identities = 102/266 (38%), Positives = 159/266 (59%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE +++ RYL + RK FIS+ + SF+G+M+GV LI+VM+VMNGFR +++ ++LG
Sbjct: 14 FAAFEWMLSGRYLRARRKEGFISVIAGFSFLGIMLGVATLIIVMAVMNGFRTELLSKILG 73
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGH+++Q PL D++ +A+R+ + + P V GQA S +GV VRGI
Sbjct: 74 LNGHLLVQPLESPLTDWKDVADRVSQVQGIRLAAPVVDGQALASSPY-NAAGVFVRGIRA 132
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+D + L + FD G+GV IG+ LA L + GD + +++P G VTPMG
Sbjct: 133 NDLNNLTSIAKNIKQGTLEGFDDGQGVAIGRRLADQLSLHAGDSVTLVAPRGAVTPMGTT 192
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K Y + +F + +YD+ V+M L EAQ YFN N V+ IEV+ +PD I+ ++
Sbjct: 193 PRIKPYKIAAVFEIGMSEYDSTFVFMPLAEAQAYFNRANDVTAIEVYTDNPDKIDDFRKS 252
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ G V ++DW+QR FF+ +
Sbjct: 253 VTESAGRPVFLVDWRQRNSTFFNALQ 278
>gi|209885077|ref|YP_002288934.1| lipoprotein releasing system transmembrane protein LolC
[Oligotropha carboxidovorans OM5]
gi|209873273|gb|ACI93069.1| lipoprotein releasing system transmembrane protein LolC
[Oligotropha carboxidovorans OM5]
Length = 422
Score = 165 bits (416), Expect = 7e-39, Method: Composition-based stats.
Identities = 101/266 (37%), Positives = 161/266 (60%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE +++ RYL + RK FIS+ + SF+G+M+GV LI+VM+VMNGFR++++ ++LG
Sbjct: 10 FAAFEWLISARYLRARRKEGFISVIAGFSFLGIMLGVATLIIVMAVMNGFRKELLDKILG 69
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGH+++Q PL D++ +A+R++ + V P V GQA S SGVLVRGI +
Sbjct: 70 LNGHLLVQPLESPLTDWKDVADRINGVTGVRLAAPIVEGQALASSPF-NASGVLVRGIRS 128
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+D L + FD G+GV IG+ LA L + GD + +++P G VTPMG
Sbjct: 129 ADLDKLTSIAKNIKQGTLEGFDEGQGVAIGRRLADQLSLRAGDTVTLVAPRGAVTPMGTT 188
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K Y V +F + +YD+ V+M L EAQ YFN + V+ IE++ +PD ++ ++
Sbjct: 189 PRIKPYKVAAVFEIGMSEYDSSFVFMPLVEAQAYFNRPSDVTAIEIYTDNPDKVDAYRKS 248
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + ++DW+QR FF+ +
Sbjct: 249 VAEAAERPIFMVDWRQRNSTFFNALQ 274
>gi|13471386|ref|NP_102952.1| hypothetical protein mll1342 [Mesorhizobium loti MAFF303099]
gi|14022128|dbj|BAB48738.1| mll1342 [Mesorhizobium loti MAFF303099]
Length = 428
Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats.
Identities = 112/266 (42%), Positives = 163/266 (61%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE VAWRYL S RK IS+ + ISF+G+M+GV LIVVM+VMNGFR +++ R+LG
Sbjct: 15 FSFFERTVAWRYLRSRRKETVISVIASISFLGIMLGVATLIVVMAVMNGFRAELLTRILG 74
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGH+++Q PL DY +A R++ +P V +P + GQ G GG+G LVRGI
Sbjct: 75 VNGHLIVQPLDSPLEDYAQVAGRINGVPGVKYAIPLIDGQVLAQGNVGGGTGALVRGIRG 134
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D + + FD G+GV IGK +A+NLG+++GD I ++SP GDVTP+G
Sbjct: 135 EDLGKIAIVANNIKQGSLASFDSGEGVAIGKRMAQNLGLTLGDTITLISPDGDVTPIGTT 194
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K Y + +F + +YD +VYM EAQLYFN++ IE++V +PD ++
Sbjct: 195 PRMKGYKIAAIFEVGMSEYDTSIVYMPFSEAQLYFNMDGRAQTIEIYVDNPDNVDALKPK 254
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + ++DW+QR + FFS +
Sbjct: 255 VEEAAQRPIDMVDWRQRNETFFSALQ 280
>gi|118590018|ref|ZP_01547422.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
protein [Stappia aggregata IAM 12614]
gi|118437515|gb|EAV44152.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
protein [Stappia aggregata IAM 12614]
Length = 434
Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats.
Identities = 114/266 (42%), Positives = 164/266 (61%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE ++A RYL S R+ FIS+ + SF G+M+GV LI+VM+VMNGFR +++ ++LG
Sbjct: 22 FSAFEWMIAGRYLRSRRRETFISVIAGFSFAGIMLGVATLIIVMAVMNGFRTELLGKILG 81
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
INGH+++Q PL DY ++ RL +P+V+ +PFV GQA VSG + G LVRG+
Sbjct: 82 INGHMLVQPIDQPLTDYDAVSARLQGVPEVVSAIPFVEGQALVSGPAGNF-GALVRGLHE 140
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
SD + + + FD G+GV IG +A+ LGIS+GD + I+SP G VTPMG+
Sbjct: 141 SDLRRVPLIANNVRSGSLDGFDAGEGVAIGSRMAQQLGISLGDNVTIISPRGSVTPMGVT 200
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K+Y V +F + +YD ++M ++E+Q YFN++ +GIEV+V DPD +
Sbjct: 201 PRLKAYPVTAIFEIGMSEYDATFLFMPMEESQAYFNMDGKATGIEVYVADPDRVGAMKSM 260
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
I V DW+QR FFS E
Sbjct: 261 IEEAADRPTFVTDWRQRNVTFFSALE 286
>gi|90417822|ref|ZP_01225734.1| ABC transporter, permease protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90337494|gb|EAS51145.1| ABC transporter, permease protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 434
Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats.
Identities = 110/266 (41%), Positives = 158/266 (59%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+RFE ++A RYL S R++A +S+ + SF+G+M+GV ALI+VMSVMNGFR +++ R+LG
Sbjct: 21 FARFEWMLAGRYLRSRRRDAGVSVIAGFSFLGIMLGVAALIIVMSVMNGFRGELLTRILG 80
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGHVV+ PL D+ + ++ +P V +P V GQ SGL+S +G LV+G+
Sbjct: 81 VNGHVVMYPIDRPLDDFSDVTAAVETVPGVAFAMPLVQGQVLASGLASSSTGALVKGVRG 140
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D + L+ + F G G+ IG LA LG+ +GD I ++SP GDVTP+G
Sbjct: 141 EDLADLKPVSENIRQGTLDGFSEGGGLAIGSRLAEALGLRLGDNITLVSPDGDVTPLGTT 200
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K+Y V +F + +YD VYM L EAQL+FN E +E+FV DPD ++
Sbjct: 201 PRVKAYPVAAIFEIGLSEYDASYVYMPLAEAQLFFNHEGLAQSVEIFVDDPDRVQDLQRT 260
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
I G + WQ + Q FFS E
Sbjct: 261 IETAAGRPNYTVTWQTQNQSFFSALE 286
>gi|257092665|ref|YP_003166306.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Candidatus Accumulibacter phosphatis clade IIA str.
UW-1]
gi|257045189|gb|ACV34377.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Candidatus Accumulibacter phosphatis clade IIA str.
UW-1]
Length = 415
Score = 164 bits (415), Expect = 9e-39, Method: Composition-based stats.
Identities = 75/267 (28%), Positives = 138/267 (51%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +E+++ RY + + N FIS S IS +G+ +GV ALIVV+SVMNGF+ ++ R+L
Sbjct: 1 MALPYELLIGLRYTRAKKHNHFISFISLISMLGIALGVAALIVVLSVMNGFQTELRARIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ HV I + +Q +A++ V+ PFV Q ++ + V+ +
Sbjct: 61 AVVSHVQITGASGEMSAWQGVASQAAGHEHVVAAAPFVQAQGMLAFGQAVRGAVVRGILP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G + +I+G +LAR LG+ +GD++ ++SP G VTP G+
Sbjct: 121 DQEDKVADFRPHMKNGELDALQPDSFTIILGSELARALGVFVGDRVTLISPQGVVTPAGV 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K++TV G+F + +YD+G+ + L +AQ + +++ VSG+ + + D +
Sbjct: 181 VPRLKTFTVAGLFEVGMYEYDSGLALIHLADAQRLYRMDDRVSGVRLKLDDLFVAPRVAR 240
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ L + DW + + FF +
Sbjct: 241 SLASTLDTEAFISDWTRSHANFFRAVQ 267
>gi|255020530|ref|ZP_05292594.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Acidithiobacillus caldus ATCC 51756]
gi|254970050|gb|EET27548.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Acidithiobacillus caldus ATCC 51756]
Length = 414
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 86/265 (32%), Positives = 145/265 (54%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ +E+ + RY + R+N FIS + + +G++IGV ALI VM+VMNGF + R+L
Sbjct: 1 MTPYELWIGLRYTRAKRRNHFISFITGTAILGMVIGVAALIAVMAVMNGFDHTLRSRILA 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ ++IQ P++D+ RL +P V V P+V QA +S V+
Sbjct: 61 VTSDIIIQGNGVPVLDWPVAVRRLQRLPGVTGVAPYVQAQAMLSHDGLVSGAVVEGIDPE 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + G++ R G+++G+ LAR LG+ +G K+ ++SP G VTP+G+
Sbjct: 121 LEGRVNRLGADMKAGSLDALHTRDWGIVLGRALARQLGVGVGGKVTLISPQGGVTPLGVT 180
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R + +TV+G+F + YD+GM Y+SL++AQ + L+ V+G+ + +KDP A ++
Sbjct: 181 PRLRQFTVVGLFSVGIYAYDSGMAYISLKDAQRLYGLDQGVTGLRMQIKDPFAAPAFAKD 240
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCY 268
+ LG V DW Q ++ FF
Sbjct: 241 LQTRLGPAFYVQDWTQTHENFFKAL 265
>gi|91776447|ref|YP_546203.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Methylobacillus flagellatus KT]
gi|91710434|gb|ABE50362.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Methylobacillus flagellatus KT]
Length = 421
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 81/273 (29%), Positives = 141/273 (51%), Gaps = 4/273 (1%)
Query: 1 MSIFS--RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMI 58
M+ F FE+ V RY + R+N FIS S S IG+ +GV ALIVV+SVMNGF+E++
Sbjct: 1 MAFFRQLPFELFVGLRYTRAKRRNHFISFISLTSMIGIGLGVAALIVVLSVMNGFQEELR 60
Query: 59 KRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
R+LG+ H+ I L D++ + ++ P V P+V Q +S S ++
Sbjct: 61 NRILGVASHLQITGPDNVLEDWRSLEQKVKGAPHVQAAAPYVMAQGMLSFSQSVQGAIIR 120
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
+ +++ + G + + GV++G +LA++LG+ +GDK+ +++P G T
Sbjct: 121 GVLPDAEDKVAELGSHMRAGRLQDLKPGEFGVVLGAELAQSLGVVLGDKVVLMAPQGQFT 180
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
P G+ R K +TV+G+F + +YD+G+ + L +A + + VSG+ + + D
Sbjct: 181 PTGVVPRIKQFTVVGVFEIGMFEYDSGLALIHLDDAARLYRMGENVSGVRLKLDDLFNAP 240
Query: 239 KTHENIVRIL--GNGVVVIDWQQRYQIFFSCYE 269
+ L + DW Q++ FF +
Sbjct: 241 AVARQLGERLMGTGNYYISDWTQQHANFFRAIQ 273
>gi|148255882|ref|YP_001240467.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Bradyrhizobium sp. BTAi1]
gi|146408055|gb|ABQ36561.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Bradyrhizobium sp. BTAi1]
Length = 426
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 101/266 (37%), Positives = 157/266 (59%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE +++ RYL + R+ FIS+ + SF+G+M+GV LI+VM+VMNGFR++++ ++LG
Sbjct: 14 FAPFEWMLSGRYLRARRREGFISVIAGFSFLGIMLGVATLIIVMAVMNGFRKELLDKILG 73
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGH+++Q PL D++ ++ R+ + + P V GQ S SGV +RGI +
Sbjct: 74 LNGHLLVQPLESPLTDWKDVSERISQVQGIRLAAPVVDGQGLGSSPF-NASGVFIRGIRS 132
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D L + FD G+GV IG+ LA L + GD I +++P G VTPMG
Sbjct: 133 QDLVNLTSIAKNIKQGTLEGFDEGQGVAIGRRLADLLSLHAGDSITLVAPKGAVTPMGTT 192
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K Y V +F + +YD+ V+M L EAQ YFN N V+ IE+F +PD +E+ +
Sbjct: 193 PRIKPYKVAAVFEIGMSEYDSSFVFMPLSEAQAYFNRNNDVTAIEIFTSNPDKVEQFRKT 252
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ G V ++DW+QR FF+ +
Sbjct: 253 VTEAAGRPVFLVDWRQRNSTFFNALQ 278
>gi|302878887|ref|YP_003847451.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Gallionella capsiferriformans ES-2]
gi|302581676|gb|ADL55687.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Gallionella capsiferriformans ES-2]
Length = 414
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 79/266 (29%), Positives = 142/266 (53%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+E+ + RY + R+N FIS S IS +G+ +GVMALIVV+SVMNGF++++ R+LG
Sbjct: 1 MQPYELFIGLRYTRAKRRNHFISFISLISMLGMGLGVMALIVVLSVMNGFQKEIRARMLG 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ H+ + + ++Q + + P V P+V+GQ +S S ++
Sbjct: 61 ASPHLEVVADGGRMENWQPLLGTVLHHPQVSAAAPYVAGQGMLSFGQSVQGVMVRGIDPE 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + S + G +++ G+++G DLAR LG+ +G+K+ +++P G +TP GM
Sbjct: 121 RETAITDLSNNIKAGKLTDLRSTEFGIVLGSDLARALGVRMGEKVMLIAPQGSITPAGMM 180
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K + V+G+F + YDN + +++ +AQ F L +AV+GI +++ D
Sbjct: 181 PRVKQFRVVGIFEIGMAPYDNSLALVNINDAQKLFQLGDAVTGISTKLREIDKAPDVASE 240
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L G+ DW + +F +
Sbjct: 241 LQNQLPQGLYANDWTHQNSNYFKAVQ 266
>gi|218682656|ref|ZP_03530257.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Rhizobium etli CIAT 894]
Length = 421
Score = 164 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 116/266 (43%), Positives = 166/266 (62%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE +VAWRYL + RK AFIS+ + SF+G+M+GV LI+VM+VMNGFR +++ R+LG
Sbjct: 8 FSTFERLVAWRYLRARRKEAFISVIAGFSFVGIMLGVATLIIVMAVMNGFRTELVSRILG 67
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
INGH+++Q P DY +A+RL +P V LP V GQ S + G +G LVRG+
Sbjct: 68 INGHMIVQPSDGPFTDYADLASRLGAVPGVKMALPLVEGQVLASAQAGGSTGALVRGVRA 127
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D + L+ F G+GV+IG +A LG+S+GD I + SP GD+TPMG+
Sbjct: 128 EDLTKLKAVSENIKPGDMVGFASGQGVLIGTGMATQLGLSVGDLITLTSPDGDITPMGVS 187
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R KSY + G+F + +YD+ +++M L+E+QL+FN E V IE+FV P I+
Sbjct: 188 PRVKSYKISGLFEIGMSEYDSSIIFMPLEESQLFFNAEGLVQSIELFVDHPGDIDTLRPK 247
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+V G + + DW+QR Q FFS +
Sbjct: 248 VVEAAGRQINLTDWRQRNQTFFSALQ 273
>gi|182678767|ref|YP_001832913.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Beijerinckia indica subsp. indica ATCC 9039]
gi|182634650|gb|ACB95424.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Beijerinckia indica subsp. indica ATCC 9039]
Length = 439
Score = 164 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 101/265 (38%), Positives = 159/265 (60%), Gaps = 2/265 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE ++A RYL + R F+S+ + SF+G+ +GV LIVVMSVMNGF ++++ +++G
Sbjct: 28 FAPFEWMIALRYLRARRSQGFVSVIAGFSFLGITLGVATLIVVMSVMNGFHKELLDKIVG 87
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
INGH+ +Q PL DY+ + +++D +P + LP V +A + ++ + LVRGI
Sbjct: 88 INGHIFLQATESPLTDYESVVHQIDGLPGIELALPLV--EAPAAASTTNMAFALVRGIRE 145
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D L + FD+ GV+IG+ LA NLG+ +GDKI +L+ G TP G+
Sbjct: 146 VDLKRLPGIAGHVTLGTLDGFDKAGGVVIGQRLAENLGLGLGDKIKLLTANGTQTPFGVT 205
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
RSK YTV G+F++ ++DN VY+ L EAQ +FN E S IE+F+ DPD I+
Sbjct: 206 PRSKVYTVTGIFQIGMAEFDNLFVYLPLPEAQAFFNKEGEASVIEIFLTDPDRIDAARHV 265
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCY 268
+ + +++ DW++R + FF
Sbjct: 266 LQDHITRPMIMTDWRERNRTFFDAL 290
>gi|114332442|ref|YP_748664.1| lipoprotein releasing system, transmembrane protein, LolC/E family
protein [Nitrosomonas eutropha C91]
gi|114309456|gb|ABI60699.1| lipoprotein releasing system, transmembrane protein, LolC/E family
protein [Nitrosomonas eutropha C91]
Length = 415
Score = 164 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 80/267 (29%), Positives = 140/267 (52%), Gaps = 1/267 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ +E ++ RY + R+N FIS S IS +G+ +G+ ALI VMSVMNGF +++ R+LG
Sbjct: 1 MASYEFLIGLRYTRAKRRNHFISFISLISLLGMTLGMTALITVMSVMNGFHKEVRARILG 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ H I L D++ I + P ++ P++ Q +S + ++ + +
Sbjct: 61 VASHAQISSYEGSLYDWEKIEEIVTRNPQIVAAAPYIDAQGMLSHDNMVHGVMVRGILPD 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ G + G G++IG++LARNL + GDKI ++SP G +TP G+
Sbjct: 121 DENKVADFGDKMIMGKLDQLVPGGFGIVIGRELARNLNVFPGDKIVLISPQGQITPAGIL 180
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHE 242
R K +TV+G+F + +YD+G+ + L +AQ + + N VSGI + + D +
Sbjct: 181 PRLKQFTVIGIFEVGHFEYDSGLALIHLSDAQKLYRMAPNQVSGIRLKLHDMFDAPQVIR 240
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ IL + DW Q++ +F +
Sbjct: 241 DLAEILPPDLYFTDWTQQHANYFRAIQ 267
>gi|148560498|ref|YP_001258800.1| ABC transporter permease [Brucella ovis ATCC 25840]
gi|148371755|gb|ABQ61734.1| ABC transporter, permease protein [Brucella ovis ATCC 25840]
Length = 413
Score = 164 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 110/263 (41%), Positives = 160/263 (60%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
FE ++AWRYL + R+ FIS+ + SF G+M+GV LI+VM+VMNGFR +++ R+LGING
Sbjct: 3 FERMIAWRYLRARRRETFISVIAGFSFTGIMLGVATLIIVMAVMNGFRAELLTRILGING 62
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
H+++Q PL DY + R+D IP + +P V GQA V G G+G LVRG+ D
Sbjct: 63 HLIMQPIDRPLDDYADLIKRVDAIPGIKFAIPVVEGQALVQGNIGAGTGALVRGLREEDL 122
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
L+ S FD GV IG +A NLG+S+GD + ++SP GDVTP G+ R
Sbjct: 123 DKLKLISSNIRQGTLKGFDHSGGVAIGTRMAENLGLSVGDTLRVISPDGDVTPFGVNPRV 182
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
K+Y ++ +F + +YD+ +V M L E QL+FN E V +E+FV +PD ++ +
Sbjct: 183 KAYPIVAIFEIGMSEYDSSIVMMPLSEVQLFFNQEGKVQSLEIFVDNPDKVDAMRAPVEE 242
Query: 247 ILGNGVVVIDWQQRYQIFFSCYE 269
+ ++DW+QR Q FFS E
Sbjct: 243 AAARQLSLVDWRQRNQTFFSALE 265
>gi|154248382|ref|YP_001419340.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Xanthobacter autotrophicus Py2]
gi|154162467|gb|ABS69683.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Xanthobacter autotrophicus Py2]
Length = 447
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 105/266 (39%), Positives = 159/266 (59%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE +++ RYL + RK FIS+ + SF+G+M+GV LI+VM+VMNGFR++++ ++LG
Sbjct: 35 FSAFEWMLSLRYLRARRKEGFISVIAGFSFLGIMLGVATLIIVMAVMNGFRQELLGKILG 94
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGHV++Q PL DY +A+R+ + + +P V GQA S G SGVLVRG++
Sbjct: 95 LNGHVLVQPLESPLTDYAAVADRIAKLNGIRLAVPLVEGQALASSPF-GASGVLVRGLAE 153
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D L + +FD+G+G+ IGK LA L + GD + +++P G VTPMG
Sbjct: 154 KDLRELPSVAHNIRQGTLENFDQGQGIAIGKRLADQLSLHAGDNLTLVAPRGAVTPMGTS 213
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K Y V +F + +YD+ V+M L EAQ YFN V+ IEV++ +PD + +
Sbjct: 214 PRIKVYKVAAVFEVGMSEYDSAFVFMPLAEAQAYFNRNADVNAIEVYLNNPDDVGELRGA 273
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
I V ++DW+ R FF+ +
Sbjct: 274 IQSAAERPVYLVDWRVRNATFFNALQ 299
>gi|167563342|ref|ZP_02356258.1| putative lipoprotein releasing system transmembrane protein
[Burkholderia oklahomensis EO147]
gi|167570514|ref|ZP_02363388.1| putative lipoprotein releasing system transmembrane protein
[Burkholderia oklahomensis C6786]
Length = 417
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 77/270 (28%), Positives = 138/270 (51%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY + ++ N FIS + +S +G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MKLPYEWQIGWRYTRAGKRTTGNGFISFIALVSMLGIALGVAALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV + + D+Q A P VI P+V QA ++ + +L
Sbjct: 61 RMLSVLAHVEVFSPTGSMPDWQLTAKEARLNPSVIGAAPYVDAQALLTRQDAVSGVMLRG 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + G ++ G+++G LA NLG+ +GDK+ +++P G +TP
Sbjct: 121 VEPSLEPQVSDIGKDMKAGALTALAPGQFGIVLGNALAGNLGVGVGDKVTLVAPEGTITP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
GM R K +TV+G+F +YD+ + + +Q+AQ F L A +G+ + + D +
Sbjct: 181 AGMMPRLKQFTVVGLFESGHYEYDSSLAMIDIQDAQALFRLP-APTGVRLRLTDMQKAPQ 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L + + DW Q+ + +FS +
Sbjct: 240 VARELAHTLSGDLYIRDWTQQNKTWFSAVQ 269
>gi|15888617|ref|NP_354298.1| ABC transporter, membrane spanning protein [Agrobacterium
tumefaciens str. C58]
gi|15156341|gb|AAK87083.1| ABC transporter, membrane spanning protein [Agrobacterium
tumefaciens str. C58]
Length = 435
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 116/266 (43%), Positives = 160/266 (60%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE +VAWRYL S RK AFIS+ + SF+G+M+GV LI+VM+VMNGFR ++I R+LG
Sbjct: 22 FSAFERMVAWRYLRSRRKEAFISVIAGFSFVGIMLGVATLIIVMAVMNGFRTELISRILG 81
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
INGH+++Q P +Y +A + +P V LP V GQ SG GSG LVRG+
Sbjct: 82 INGHMIVQPIDQPFNNYDELAKKFSAVPGVTMALPLVEGQTLASGRGGAGSGALVRGVRQ 141
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D ++ + F G GV++G LA LG++ GD I ++SP GDVTPMG+
Sbjct: 142 EDIDKIKEVATNIKTGDLVGFMAGDGVLVGSRLASQLGVTAGDDITLISPEGDVTPMGIN 201
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R KSY + G+F + +YD M+YM L EAQLYFN V IE++V PD ++
Sbjct: 202 PRVKSYKISGVFEIGMSEYDASMIYMPLSEAQLYFNANGIVQSIELYVSRPDDVDGIRPL 261
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + + DW+QR Q FFS +
Sbjct: 262 VEQAAERQIYITDWRQRNQTFFSALQ 287
>gi|226940747|ref|YP_002795821.1| LolC [Laribacter hongkongensis HLHK9]
gi|226715674|gb|ACO74812.1| LolC [Laribacter hongkongensis HLHK9]
Length = 412
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 76/265 (28%), Positives = 146/265 (55%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
FE ++A RY+ + R+N+FIS S +S +G+ +GV ALI+V+SVMNGF++++ R+LG+
Sbjct: 1 MSFESMIAMRYVRARRQNSFISFISLVSIVGIALGVAALIIVLSVMNGFQKEIRTRMLGV 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H+ + L D+ + + P V PF++ Q +S + ++ +
Sbjct: 61 ASHLEVSSVTGQLNDWPAVQKLVAADPRVEASAPFIAAQGLLSAQGAVRGALVRGVVPKL 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + G +++ G G+++G +LAR LG+ +GDK+N+++P G TP GM
Sbjct: 121 EDQVVNVGSHMVVGKLTDLQPGGFGIVLGVELARALGVGMGDKVNLITPEGQFTPAGMLP 180
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
R K++TV+G+F++ +YD + + L +AQ F + ++VSG+ + + D ++
Sbjct: 181 RLKTFTVVGVFKVDMYEYDATLAMIDLADAQRLFRMGDSVSGLRLKLDDVLQAPVVKRDL 240
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ +V+ DW ++ +F +
Sbjct: 241 YPRITQNLVLTDWTDQHSNYFRAVQ 265
>gi|150396142|ref|YP_001326609.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Sinorhizobium medicae WSM419]
gi|150027657|gb|ABR59774.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Sinorhizobium medicae WSM419]
Length = 436
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 120/266 (45%), Positives = 163/266 (61%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE +VAWRYL S RK AFIS+ + SFIG+M+GV LI+VM+VMNGFR ++I R+LG
Sbjct: 23 FSAFERMVAWRYLRSRRKEAFISVIAGFSFIGIMLGVGTLIIVMAVMNGFRTELISRILG 82
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGH+++Q PL +Y +A R +P V +P V GQ G +G LVRGI
Sbjct: 83 MNGHMIVQPLDGPLTNYADLATRFSAVPGVTMAIPIVEGQVLAQGFGDASTGALVRGIRA 142
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D + L++ + F G GV IG +A LGI +G I + SP GDVTPMGM
Sbjct: 143 DDLTKLKSVSEKIQAGDLVGFASGSGVAIGSRMAEQLGIRVGGTITLTSPNGDVTPMGMN 202
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K YTV +F M +YD +++M L+EAQLYFN E V IE+FV+ PDA++ E
Sbjct: 203 PRVKGYTVSAIFEMGMSEYDATIIFMPLEEAQLYFNAEGLVQSIELFVEHPDAVDTLREP 262
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + G + + DW++R + FFS E
Sbjct: 263 VEKAAGRQIFITDWRERNRTFFSALE 288
>gi|307301112|ref|ZP_07580881.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Sinorhizobium meliloti BL225C]
gi|307317845|ref|ZP_07597283.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Sinorhizobium meliloti AK83]
gi|306896607|gb|EFN27355.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Sinorhizobium meliloti AK83]
gi|306904067|gb|EFN34653.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Sinorhizobium meliloti BL225C]
Length = 437
Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats.
Identities = 119/266 (44%), Positives = 163/266 (61%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE +VAWRYL S RK AFIS+ + SFIG+M+GV LI+VM+VMNGFR ++I R+LG
Sbjct: 24 FSAFERMVAWRYLRSRRKEAFISVIAGFSFIGIMLGVGTLIIVMAVMNGFRTELISRILG 83
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGH+++Q PL +Y +A R +P V +P V GQ GL +G LVRGI
Sbjct: 84 MNGHMIVQPLDGPLTNYADLATRFSAVPGVTMAIPIVEGQVLAQGLGDASTGALVRGIRA 143
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D + L++ F G GV IG +A LGI +G I + SP GDVTPMGM
Sbjct: 144 DDLTKLKSISEHIQSGDLVGFASGSGVAIGSRMAEQLGIRVGGTITLTSPNGDVTPMGMN 203
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K+YTV +F M +YD +++M L+EAQLYFN E V IE+F + PDA+++ +
Sbjct: 204 PRVKAYTVSAIFEMGMSEYDATIIFMPLEEAQLYFNAEGLVQSIEIFAEHPDAVDELRKP 263
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ G + + DW++R + FFS E
Sbjct: 264 VEDAAGRQIFITDWRERNRTFFSALE 289
>gi|253996014|ref|YP_003048078.1| LolC/E family lipoprotein releasing system transmembrane protein
[Methylotenera mobilis JLW8]
gi|253982693|gb|ACT47551.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Methylotenera mobilis JLW8]
Length = 422
Score = 163 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 83/270 (30%), Positives = 139/270 (51%), Gaps = 6/270 (2%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
+E+ V WRY + RKN FIS S S IG+ +GV ALIVV+SVMNGF++++ R+LG+
Sbjct: 5 PYELFVGWRYTRAKRKNHFISFISLTSMIGIALGVAALIVVLSVMNGFQKELRTRILGVA 64
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
H+ + L D+Q +A P+V P++S QA +S ++ I N++
Sbjct: 65 SHLEVTGGGNQLSDWQSVAAFAARQPNVQASAPYISAQAMLSYDQGVQGAIVRGVIPNAE 124
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
G + + G+++G DLA+ LG IGDK+ +++P G TP G+ R
Sbjct: 125 DQVADLGKHMKVGRLEDLRAGEFGIVLGVDLAQALGAQIGDKVVLMAPQGQFTPTGVVPR 184
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
K +T++G+F++ +YD G+ + + +A + + + VSG+ + + D NI
Sbjct: 185 LKQFTLVGLFQIGMYEYDAGLALIHMDDAAKLYRMGDKVSGVRLKLADLFDAPAVAANIS 244
Query: 246 RILG------NGVVVIDWQQRYQIFFSCYE 269
L V DW +++ FF +
Sbjct: 245 DQLNAQANRTGDYYVSDWTRQHANFFRAVQ 274
>gi|117924340|ref|YP_864957.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Magnetococcus sp. MC-1]
gi|117608096|gb|ABK43551.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Magnetococcus sp. MC-1]
Length = 413
Score = 162 bits (409), Expect = 5e-38, Method: Composition-based stats.
Identities = 84/267 (31%), Positives = 137/267 (51%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS FE V RYL + R FIS + +S G+ +GV ALIVV++VM GF+ ++ +++L
Sbjct: 1 MFSSFEWRVGLRYLRAKRSQRFISAITALSVAGIALGVAALIVVLAVMTGFQGELQRQIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ HVV+Q + D + + ++ P+V PFV A + G+ +RG+
Sbjct: 61 GVVSHVVVQSYGGSMEDVEGVLRKVQSRPNVTGAAPFVLANALIYNG-GQAYGIALRGVD 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ N G GV++G+ LARNLG+ + D+I ++ P G+VTP G
Sbjct: 120 PEREKGVSNLHVNMVRGDVA-AMAGFGVVLGESLARNLGVGLNDRITLMVPKGNVTPAGT 178
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K + V G+F +YD + Y+ + +AQ L +V+GIEV PD +
Sbjct: 179 VPRVKRFRVAGIFDSGMHEYDTNLAYIHINDAQKLLRLGESVTGIEVKTPHPDLAMGVRQ 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ + L + DW Q + FF+ +
Sbjct: 239 DLEKQLSGHFWIRDWMQMNRNFFNAIK 265
>gi|167739329|ref|ZP_02412103.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia pseudomallei 14]
Length = 417
Score = 162 bits (408), Expect = 5e-38, Method: Composition-based stats.
Identities = 77/270 (28%), Positives = 137/270 (50%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY + ++ N FIS + +S +G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MKLPYEWQIGWRYTRAGKRTTGNGFISFIALVSMLGIALGVAALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV I + D+Q A VI P+V QA ++ + +L
Sbjct: 61 RMLSVLAHVEIFSPTGSMPDWQLTAKEARLNRSVIGAAPYVDAQALLTRQDAVSGVMLRG 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + G ++ G+++G LA NLG+ +GDK+ +++P G +TP
Sbjct: 121 VEPSLEPQVSDIGKDMKAGALTALAPGQFGIVLGNALAGNLGVGVGDKVTLVAPEGTITP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
GM R K +TV+G+F +YD+ + + +Q+AQ F L A +G+ + + D +
Sbjct: 181 AGMMPRLKQFTVVGIFESGHYEYDSTLAMIDIQDAQALFRLP-APTGVRLRLTDMQKAPQ 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L + + DW Q+ + +FS +
Sbjct: 240 VARELAHTLSGDLYIRDWTQQNKTWFSAVQ 269
>gi|300312089|ref|YP_003776181.1| lipoprotein release ABC transporter permease [Herbaspirillum
seropedicae SmR1]
gi|300074874|gb|ADJ64273.1| ABC-type lipoprotein release transport system, permease component
protein [Herbaspirillum seropedicae SmR1]
Length = 421
Score = 162 bits (408), Expect = 5e-38, Method: Composition-based stats.
Identities = 77/275 (28%), Positives = 148/275 (53%), Gaps = 6/275 (2%)
Query: 1 MSIFS--RFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFRE 55
MS+ FE +V RY + ++ N+FIS S IS G+ +GV ALIVV+SVMNGF++
Sbjct: 1 MSLIKNLPFEWLVGIRYTRAGKRSGRNSFISFISLISMAGIALGVAALIVVLSVMNGFQK 60
Query: 56 DMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSG 115
++ R+L + H+ + + D+Q +A + P+V+ P+V+ QA ++ S
Sbjct: 61 EVRDRMLSVLAHIEVFDASGSMKDWQAVAKQTFQNPEVLGAAPYVAAQAMMTRDDSVRGV 120
Query: 116 VLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYG 175
++ + + + G+ + ++IG +LAR L + +GDK+ +++P G
Sbjct: 121 LVRGVLPQEEPKVSDVAKQVKQGSFDSLKPGEFNIVIGGELARGLRVGLGDKVTLIAPQG 180
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD 235
VTP G+ R K +TV G+F ++D+ + ++ LQ+A+ F + +A +G+ + ++D
Sbjct: 181 QVTPAGVLPRLKQFTVTGIFEAGHYEFDSSLAFIDLQDAETLFRM-DAPTGVRLRIRDML 239
Query: 236 AIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ + + R L + + DW Q+ +F+ ++
Sbjct: 240 QAPQVTQELARTLTGDLYLRDWSQQNSNWFAAVKT 274
>gi|83311671|ref|YP_421935.1| ABC-type transport system, permease component [Magnetospirillum
magneticum AMB-1]
gi|82946512|dbj|BAE51376.1| ABC-type transport system, permease component [Magnetospirillum
magneticum AMB-1]
Length = 414
Score = 162 bits (408), Expect = 5e-38, Method: Composition-based stats.
Identities = 101/267 (37%), Positives = 152/267 (56%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
IF+ FE +VA+RYL + RK FIS+ + S G+ +GV LIVVM+VMNGFR +++ R+L
Sbjct: 2 IFNSFERMVAFRYLRARRKEGFISVIAGFSLAGIGLGVATLIVVMAVMNGFRHELLGRIL 61
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
GINGH+ + PL Y +A+ + +P V +V+P GQ F + G ++
Sbjct: 62 GINGHIGVYGSGAPLSGYDPLADSIRKLPGVTRVIPTAEGQVFATSSGGGTGAIVRGVRG 121
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ F + Y DF V+IGK LA LG+ IGD I+++SP G+VT G
Sbjct: 122 QDLLTR--PVFQKKYRGNPADFAGDDAVVIGKRLADKLGVRIGDSISLISPKGNVTAFGT 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + Y V+G F + +YD+G ++M L+ AQ YF L V+ IEVF+++PD + +T +
Sbjct: 180 VPRMRGYRVVGTFDVGMFEYDSGFIFMPLEAAQTYFRLPEQVTQIEVFLENPDMVPETRK 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I + G + DWQQ FF+ +
Sbjct: 240 AIWDLTGTTATIYDWQQANANFFNAIQ 266
>gi|289208378|ref|YP_003460444.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Thioalkalivibrio sp. K90mix]
gi|288944009|gb|ADC71708.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Thioalkalivibrio sp. K90mix]
Length = 416
Score = 162 bits (408), Expect = 6e-38, Method: Composition-based stats.
Identities = 67/268 (25%), Positives = 128/268 (47%), Gaps = 1/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+N FIS S +S +G+++GVMALI V+SVMNGF ++ R+L
Sbjct: 1 MFRPLPLAIGLRYTRAKRRNHFISFISVVSILGLVLGVMALITVLSVMNGFERELRDRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H IQ L +++ + +++ I + + + + + SG L+RG+
Sbjct: 61 GMASHATIQDVNGGLRNWESLKEQVETIDERVLAVAPYVQGEAMLSATGNISGALIRGVD 120
Query: 123 NSDFSYLQNSFSRFYGNV-SNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ +++G++LA L + +GD + +++P V+P G
Sbjct: 121 PEAEERVARIGEHMTQGRLGQLEPGAYRIVLGRELAAELRVRVGDSLILMAPQASVSPAG 180
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ R + + V G+F + +YD G ++ LQ+AQ F +V+G+ + + D
Sbjct: 181 VMPRMRRFEVAGIFEVGMYEYDRGTAFIHLQDAQAVFQTGESVTGLRLRLTDMMRAGVVS 240
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L V DW +++ F +
Sbjct: 241 REVASQLDGLFRVSDWTRQHANLFRAIQ 268
>gi|222085596|ref|YP_002544126.1| lipoprotein ABC transporter [Agrobacterium radiobacter K84]
gi|221723044|gb|ACM26200.1| lipoprotein ABC transporter [Agrobacterium radiobacter K84]
Length = 436
Score = 162 bits (408), Expect = 6e-38, Method: Composition-based stats.
Identities = 113/266 (42%), Positives = 165/266 (62%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE +VAWRYL S RK A IS+ + S +G+M+GV ALI+VM+VMNGFR ++ K++LG
Sbjct: 23 FSGFERLVAWRYLRSRRKEASISVIAGFSLVGIMLGVAALIIVMAVMNGFRAELFKQILG 82
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
NGHV++Q PL DY +A + +P V LP V G+ SG G+G LVRGI +
Sbjct: 83 FNGHVIVQPIDSPLNDYASLAQKFAAVPGVTMALPLVEGETLASGRGGSGTGALVRGIRS 142
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D + L+ F G+GV++G LAR LG+++GD+I + +P GDVTP G+
Sbjct: 143 EDLTKLKTVSDHIVDGDMVGFAAGQGVMVGSRLARQLGLTVGDQITLTAPDGDVTPFGVN 202
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K+Y++ G+F + +YD+ +V+M L+EAQL+FN E V IE+F+ +PD ++
Sbjct: 203 PRVKAYSISGIFEVGMSEYDSSVVFMPLEEAQLFFNAEGIVEKIELFISNPDDVDLLRPK 262
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
I G + + DW+Q FFS +
Sbjct: 263 IEAAAGRQIFLTDWRQVNATFFSALQ 288
>gi|126439271|ref|YP_001059610.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Burkholderia pseudomallei 668]
gi|126453503|ref|YP_001066892.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Burkholderia pseudomallei 1106a]
gi|167720337|ref|ZP_02403573.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia pseudomallei DM98]
gi|167824940|ref|ZP_02456411.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia pseudomallei 9]
gi|167846457|ref|ZP_02471965.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia pseudomallei B7210]
gi|167895035|ref|ZP_02482437.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia pseudomallei 7894]
gi|167903420|ref|ZP_02490625.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia pseudomallei NCTC 13177]
gi|167911670|ref|ZP_02498761.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia pseudomallei 112]
gi|167919671|ref|ZP_02506762.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia pseudomallei BCC215]
gi|226195486|ref|ZP_03791074.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia pseudomallei Pakistan 9]
gi|242317450|ref|ZP_04816466.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia pseudomallei 1106b]
gi|254191412|ref|ZP_04897916.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia pseudomallei Pasteur 52237]
gi|254297043|ref|ZP_04964496.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia pseudomallei 406e]
gi|126218764|gb|ABN82270.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia pseudomallei 668]
gi|126227145|gb|ABN90685.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia pseudomallei 1106a]
gi|157807230|gb|EDO84400.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia pseudomallei 406e]
gi|157939084|gb|EDO94754.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia pseudomallei Pasteur 52237]
gi|225932446|gb|EEH28445.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia pseudomallei Pakistan 9]
gi|242140689|gb|EES27091.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia pseudomallei 1106b]
Length = 417
Score = 162 bits (408), Expect = 6e-38, Method: Composition-based stats.
Identities = 77/270 (28%), Positives = 137/270 (50%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY + ++ N FIS + +S +G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MKLPYEWQIGWRYTRAGKRTTGNGFISFIALVSMLGIALGVAALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV I + D+Q A VI P+V QA ++ + +L
Sbjct: 61 RMLSVLAHVEIFSPTGSMPDWQLTAKEARLNRSVIGAAPYVDAQALLTRQDAVSGVMLRG 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + G ++ G+++G LA NLG+ +GDK+ +++P G +TP
Sbjct: 121 VEPSLEPQVSDIGKDMKAGALTALAPGQFGIVLGNALAGNLGVGVGDKVTLVAPEGTITP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
GM R K +TV+G+F +YD+ + + +Q+AQ F L A +G+ + + D +
Sbjct: 181 AGMMPRLKQFTVVGIFESGHYEYDSTLAMIDIQDAQALFRLP-APTGVRLRLTDMQKAPQ 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L + + DW Q+ + +FS +
Sbjct: 240 VARELAHTLSGDLYIRDWTQQNKTWFSAVQ 269
>gi|315122708|ref|YP_004063197.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Candidatus Liberibacter solanacearum CLso-ZC1]
gi|313496110|gb|ADR52709.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Candidatus Liberibacter solanacearum CLso-ZC1]
Length = 416
Score = 162 bits (408), Expect = 6e-38, Method: Composition-based stats.
Identities = 192/269 (71%), Positives = 233/269 (86%), Gaps = 1/269 (0%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M FSRFEV +AWRYLFS RK +FISIAS +SFIGVMIGVMALIVVMSVMNGFR DMIKR
Sbjct: 1 MIFFSRFEVAIAWRYLFSRRKESFISIASSVSFIGVMIGVMALIVVMSVMNGFRADMIKR 60
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+LGINGH++IQQKYYPLVDYQ ++ +L IPDV +V PFV+GQAF+S ++S GSGV VRG
Sbjct: 61 ILGINGHIIIQQKYYPLVDYQSLSKKLSSIPDVTQVSPFVTGQAFISSMNSRGSGVSVRG 120
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
IS+ DFS+++ SFSRFYG + NDFD+GKG++IG+DLAR LGISIGDKI ILSPYGD+TP+
Sbjct: 121 ISSKDFSHIKKSFSRFYGGL-NDFDQGKGIVIGEDLARVLGISIGDKIKILSPYGDITPL 179
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G+G RSKSYTV +F++R PDYD+GM+YM L+EAQLYFN+ENAVSGIE+FVKDPD IEK+
Sbjct: 180 GIGTRSKSYTVSAIFQIRIPDYDSGMIYMPLEEAQLYFNIENAVSGIEIFVKDPDMIEKS 239
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+NI+ I GN V ++DWQQRYQ+FF +
Sbjct: 240 RKNIIDIFGNDVSIVDWQQRYQMFFYAMQ 268
>gi|134277900|ref|ZP_01764615.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia pseudomallei 305]
gi|134251550|gb|EBA51629.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia pseudomallei 305]
Length = 417
Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats.
Identities = 77/270 (28%), Positives = 138/270 (51%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY + ++ N FIS + +S +G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MKLPYEWQIGWRYTRAGKRTTGNGFISFIALVSMLGIALGVAALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV I + D+Q A VI P+V QA ++ + +L
Sbjct: 61 RMLSVLAHVEIFSPTGSMPDWQLTAKEARLNRSVIGAAPYVDAQALLTRQDAVSGVMLRG 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + G ++ G+++G LA NLG+ +GDK+ +++P G +TP
Sbjct: 121 VEPSLEPQVSDIGKDMKAGALTALAPGQFGIVLGNALAGNLGVGVGDKVTLVAPEGTITP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
GM R K +TV+G+F +YD+ + +++Q+AQ F L A +G+ + + D +
Sbjct: 181 AGMMPRLKQFTVVGIFESGHYEYDSTLAMINIQDAQALFRLP-APTGVRLRLTDMQKAPQ 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L + + DW Q+ + +FS +
Sbjct: 240 VARELAHTLSGDLYIRDWTQQNKTWFSAVQ 269
>gi|186476204|ref|YP_001857674.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Burkholderia phymatum STM815]
gi|184192663|gb|ACC70628.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia phymatum STM815]
Length = 417
Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats.
Identities = 76/270 (28%), Positives = 139/270 (51%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY + ++ N FIS + +S G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MKLPYEWQIGWRYTRAGKRTTGNGFISFIALVSMSGIALGVAALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV I + ++Q A +VI P+V QA ++ + L
Sbjct: 61 RMLSVLAHVEIFSPAGSMPNWQLTAQEAKQNKEVIGAAPYVEAQALLTRQDAVSGVALRG 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + G++++ G+++G DLA LG++ GDKI +++P G +TP
Sbjct: 121 VEPSLEPEVSDIGKEMKAGSLNDLKPGEFGIVLGADLAAALGVTTGDKITLVAPEGTMTP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
G+ R K + V+G+F +YD+ + + +++AQ F L A +G+ + +KD +
Sbjct: 181 AGLLPRLKQFNVVGVFESGHYEYDSTLALIDIRDAQALFRLP-APTGVRLRLKDMQRAPE 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ R L + + DW Q+ + +FS +
Sbjct: 240 VAHQLARTLSGDLYIRDWTQQNKTWFSAVQ 269
>gi|30249056|ref|NP_841126.1| hypothetical protein NE1057 [Nitrosomonas europaea ATCC 19718]
gi|30138673|emb|CAD84968.1| DUF214 [Nitrosomonas europaea ATCC 19718]
Length = 415
Score = 161 bits (407), Expect = 8e-38, Method: Composition-based stats.
Identities = 79/267 (29%), Positives = 138/267 (51%), Gaps = 1/267 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ +E ++ RY + R+N FIS S IS +G+ +G+ ALI VMSVMNGF +++ R+LG
Sbjct: 1 MASYEFLIGLRYTRAKRRNHFISFISLISLLGMTLGMTALITVMSVMNGFHKEVRARILG 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ H I L D++ I P + P++ Q +S + ++ +
Sbjct: 61 VASHAQISSYQGSLYDWEQIREAAIQNPQIAAAAPYIDAQGMLSHDNMVRGVMVRGILPA 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + G++ G+IIG++LARNL G+KI ++SP G +TP G+
Sbjct: 121 DENRVADFAGKMVEGSLDRLAPGEFGIIIGQELARNLNAFPGNKIVLISPQGQITPAGIL 180
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHE 242
R K +TV G+F + +YD+G+ + L +AQ + + N VSGI + + D + +
Sbjct: 181 PRLKQFTVTGIFDVGHFEYDSGLALIHLADAQKLYRMAPNQVSGIRLKLHDMFKAPQVIQ 240
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ R+L + DW Q++ +F +
Sbjct: 241 DLARVLPADLYFTDWTQQHANYFRAIQ 267
>gi|167837154|ref|ZP_02464037.1| putative lipoprotein releasing system transmembrane protein
[Burkholderia thailandensis MSMB43]
Length = 417
Score = 161 bits (407), Expect = 8e-38, Method: Composition-based stats.
Identities = 78/270 (28%), Positives = 137/270 (50%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY + ++ N FIS + +S +G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MKLPYEWQIGWRYTRAGKRTTGNGFISFIALVSMLGIALGVAALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV I + D+Q A VI P+V QA ++ + +L
Sbjct: 61 RMLSVLAHVEIFSPTGSMPDWQLTAKEARLNKAVIGAAPYVDAQALLTRQDAVSGVMLRG 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + G ++ G+++G LA NLG+ +GDK+ +++P G +TP
Sbjct: 121 VEPSLEPQVSDIGKDMKAGALTALAPGQFGIVLGNALAGNLGVGVGDKVTLVAPEGTITP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
GM R K +TV+G+F +YD+ + + LQ+AQ F L A +G+ + + D +
Sbjct: 181 AGMMPRLKQFTVVGIFESGHYEYDSSLAMIDLQDAQALFRLP-APTGVRLRLADMQRAPQ 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L + + DW Q+ + +FS +
Sbjct: 240 VARELAHTLSGDLYIRDWTQQNKTWFSAVQ 269
>gi|330817649|ref|YP_004361354.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
protein [Burkholderia gladioli BSR3]
gi|327370042|gb|AEA61398.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
protein [Burkholderia gladioli BSR3]
Length = 417
Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 81/270 (30%), Positives = 140/270 (51%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY + ++ N FIS + +S +G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MKLPYEWQIGWRYTRAGKRTTGNGFISFIAAVSMLGIALGVAALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV I + D+Q AN P+VI P+V QA ++ + +L
Sbjct: 61 RMLSVLAHVEIFSPTGSMPDWQLTANEARRNPEVIGSAPYVEAQALLTRQDAVSGVLLRG 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + G+++ V++G LA NLG+S+GDK+ + P G VTP
Sbjct: 121 VDPKLEPQVTDIAKDMKAGSLAALQPGQFDVVLGTALASNLGVSVGDKVTMFVPEGTVTP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
GM R + +TV+G+F +YD+ + + +Q+AQ F L A +G+ + +KD +
Sbjct: 181 AGMLPRVRQFTVVGIFESGHYEYDSTLAMIDIQDAQKLFRLP-APTGVRLRLKDMQRAPE 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L + + DW Q+ + +FS +
Sbjct: 240 VAVQLSHSLSGDLYIRDWTQQNKTWFSAVK 269
>gi|23012408|ref|ZP_00052501.1| COG4591: ABC-type transport system, involved in lipoprotein
release, permease component [Magnetospirillum
magnetotacticum MS-1]
Length = 414
Score = 161 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 102/267 (38%), Positives = 153/267 (57%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
IF+ FE +VA+RYL + RK FIS+ + S G+ +GV LIVVM+VMNGFR +++ R+L
Sbjct: 2 IFNSFERMVAFRYLRARRKEGFISVIAGFSLAGIGLGVATLIVVMAVMNGFRHELLGRIL 61
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
GINGH+ + PL Y +A + +P V KV+P GQ F + G ++ +
Sbjct: 62 GINGHIGVYGSGAPLSGYDPLAESIRKLPGVTKVIPTAEGQVFATSAGGGTGAIVRGVRA 121
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ F + Y DF V+IGK LA LG+ IGD ++++SP G+VT G
Sbjct: 122 EDLLTR--PVFQKKYRGNPADFAGDDAVVIGKRLAEKLGVRIGDSVSLISPKGNVTAFGT 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + Y V+G F + +YD+G V+M L+ AQ YF L V+ IEVF+++PD + +T +
Sbjct: 180 VPRMRGYRVVGTFDVGMFEYDSGFVFMPLEAAQTYFRLPQLVTQIEVFLENPDMVPETRK 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I + G+ + DWQQ FF+ +
Sbjct: 240 AIWDLTGSSATIYDWQQANANFFNAIQ 266
>gi|312796702|ref|YP_004029624.1| lipoprotein releasing system transmembrane protein lolC
[Burkholderia rhizoxinica HKI 454]
gi|312168477|emb|CBW75480.1| Lipoprotein releasing system transmembrane protein lolC
[Burkholderia rhizoxinica HKI 454]
Length = 494
Score = 161 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 81/267 (30%), Positives = 140/267 (52%), Gaps = 4/267 (1%)
Query: 6 RFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+E + RY + ++ N FIS S IS G+ +GV ALIVV+SVMNGF++++ R+L
Sbjct: 81 PYEWQIGLRYTRTGKRSSGNGFISFISLISMSGIALGVAALIVVLSVMNGFQKEVRDRML 140
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H+ I + +Q AN P+VI P+V QA ++ S+ L
Sbjct: 141 SVLAHIEIFSPTGSMPSWQLTANEARQNPEVIGAAPYVDAQALLTRQSAVNGVALRGIDP 200
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G +++ G+++G DLA +G+S+GDK+ +++P G +TP GM
Sbjct: 201 ALEPQVSDMGGEMKAGRLTDLRPGSFGIVLGVDLASAMGVSVGDKVTVVAPEGTMTPAGM 260
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV+G+F ++D+ + +S+ +AQ F L +A SG+ + +KD +
Sbjct: 261 LPRLKQFTVVGVFESGHYEFDSTLAMVSIADAQALFRL-SAPSGVRLRIKDMQRAPEVAR 319
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ R L + + DW Q+ + +FS +
Sbjct: 320 QLARSLSGDLYIRDWTQQNKTWFSAVQ 346
>gi|53719887|ref|YP_108873.1| putative lipoprotein releasing system transmembrane protein
[Burkholderia pseudomallei K96243]
gi|53723791|ref|YP_103316.1| lipoprotein releasing system transmembrane protein [Burkholderia
mallei ATCC 23344]
gi|67642988|ref|ZP_00441738.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia mallei GB8 horse 4]
gi|121600110|ref|YP_993513.1| putative lipoprotein releasing system transmembrane protein
[Burkholderia mallei SAVP1]
gi|124384592|ref|YP_001029058.1| putative lipoprotein releasing system transmembrane protein
[Burkholderia mallei NCTC 10229]
gi|126448606|ref|YP_001081021.1| putative lipoprotein releasing system transmembrane protein
[Burkholderia mallei NCTC 10247]
gi|167000666|ref|ZP_02266477.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia mallei PRL-20]
gi|167816544|ref|ZP_02448224.1| putative lipoprotein releasing system transmembrane protein
[Burkholderia pseudomallei 91]
gi|217421146|ref|ZP_03452651.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia pseudomallei 576]
gi|237813004|ref|YP_002897455.1| lipoprotein releasing system, hypothetical protein, LolC/E family
[Burkholderia pseudomallei MSHR346]
gi|254177780|ref|ZP_04884435.1| putative lipoprotein releasing system transmembrane protein
[Burkholderia mallei ATCC 10399]
gi|254184378|ref|ZP_04890968.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia pseudomallei 1655]
gi|254195708|ref|ZP_04902134.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia pseudomallei S13]
gi|254200271|ref|ZP_04906637.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia mallei FMH]
gi|254209349|ref|ZP_04915695.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia mallei JHU]
gi|254357980|ref|ZP_04974253.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia mallei 2002721280]
gi|52210301|emb|CAH36280.1| putative lipoprotein releasing system transmembrane protein
[Burkholderia pseudomallei K96243]
gi|52427214|gb|AAU47807.1| lipoprotein releasing system transmembrane protein, putative
[Burkholderia mallei ATCC 23344]
gi|121228920|gb|ABM51438.1| putative lipoprotein releasing system transmembrane protein
[Burkholderia mallei SAVP1]
gi|124292612|gb|ABN01881.1| putative lipoprotein releasing system transmembrane protein
[Burkholderia mallei NCTC 10229]
gi|126241476|gb|ABO04569.1| putative lipoprotein releasing system transmembrane protein
[Burkholderia mallei NCTC 10247]
gi|147749867|gb|EDK56941.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia mallei FMH]
gi|147750122|gb|EDK57193.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia mallei JHU]
gi|148027107|gb|EDK85128.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia mallei 2002721280]
gi|160698819|gb|EDP88789.1| putative lipoprotein releasing system transmembrane protein
[Burkholderia mallei ATCC 10399]
gi|169652453|gb|EDS85146.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia pseudomallei S13]
gi|184214909|gb|EDU11952.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia pseudomallei 1655]
gi|217396558|gb|EEC36575.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia pseudomallei 576]
gi|237503311|gb|ACQ95629.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia pseudomallei MSHR346]
gi|238524221|gb|EEP87655.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia mallei GB8 horse 4]
gi|243063473|gb|EES45659.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia mallei PRL-20]
Length = 417
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 77/270 (28%), Positives = 137/270 (50%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY + ++ N FIS + +S +G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MKLPYEWQIGWRYTRAGKRTTGNGFISFIALVSMLGIALGVAALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV I + D+Q A VI P+V QA ++ + +L
Sbjct: 61 RMLSVLAHVEIFSPTGSMPDWQLTAKEARLNRSVIGAAPYVDAQALLTRQDAVSGVMLRG 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + G ++ G+++G LA NLG+ +GDK+ +++P G +TP
Sbjct: 121 VEPSLEPQVSDIGKDMKAGALTALAPGQFGIVLGNALAGNLGVGVGDKVTLVAPEGTITP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
GM R K +TV+G+F +YD+ + + +Q+AQ F L A +G+ + + D +
Sbjct: 181 AGMMPRLKQFTVVGIFESGHYEYDSTLAMIDIQDAQALFRLP-APTGVRLRLTDMQKAPQ 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L + + DW Q+ + +FS +
Sbjct: 240 VARELAHTLSGDLYIRDWTQQNKTWFSAVQ 269
>gi|83748273|ref|ZP_00945299.1| LolC [Ralstonia solanacearum UW551]
gi|83725114|gb|EAP72266.1| LolC [Ralstonia solanacearum UW551]
Length = 823
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 74/268 (27%), Positives = 139/268 (51%), Gaps = 5/268 (1%)
Query: 6 RFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+E + WRY + ++ N+FIS S IS +G+ +GV ALIVV+SVMNGF++++ R+L
Sbjct: 411 PYEWQIGWRYTRAGKRATRNSFISFISLISMLGIALGVTALIVVLSVMNGFQKEVRDRML 470
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H+ I L D+Q AN +V+ P+V QA ++ + +L
Sbjct: 471 SVLSHIEIMAPG-SLPDWQRTANEALQNKEVVGAAPYVGAQAMITRDDAVRGVLLRGVSP 529
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G + + G+ +G +LAR LG+ GDK+ +++P G +TP G+
Sbjct: 530 ADEPKVSDIAKDFKSGGIDDLKPGEFGIALGSELARGLGVRQGDKVTLVAPQGTITPAGV 589
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV+G F ++D+ + + + +A+ F L+ +G+ + + D + E
Sbjct: 590 LPRMKQFTVIGTFESGHYEFDSSLALIHIDDAERLFRLDGP-TGVRLKLVDMQRAPQVAE 648
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ R L + + DW ++ + +F+ ++
Sbjct: 649 ALSRTLTGELYIRDWSRQNKNWFAAVQT 676
>gi|170748458|ref|YP_001754718.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Methylobacterium radiotolerans JCM 2831]
gi|170654980|gb|ACB24035.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Methylobacterium radiotolerans JCM 2831]
Length = 436
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 104/266 (39%), Positives = 155/266 (58%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE I+A RYL + R+ +S+ +F S +G+ +GV LI+V+SVMNGFR +++ +++G
Sbjct: 28 FAPFEWILAGRYLRARRRGGGVSVVAFFSVLGIALGVATLIIVLSVMNGFRAELLSKIVG 87
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
INGH+ P D+ ++ RL + V +P V GQAF S GGSGV++RG+
Sbjct: 88 INGHLFATPIDRPFNDWTDLSERLSKVAGVRAAVPLVEGQAFAS-SQYGGSGVIIRGVRA 146
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+D L S G FD G GV+IG+ LA LG+ GD I +++P G TP G
Sbjct: 147 ADLDALAAVSSAIRGGTLEGFDDGTGVLIGRRLADTLGLQAGDTITLVTPKGSSTPFGTA 206
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R+KSYTV +F + ++D V+M L EAQ +FN + VS IE++V DPD + E
Sbjct: 207 PRTKSYTVKAVFEVGMTEFDQTFVFMPLTEAQAFFNKDGDVSMIEIYVDDPDHVGDMREP 266
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ +++ DW+QR + FF E
Sbjct: 267 LEMAAERPILLTDWRQRNRTFFGALE 292
>gi|296446276|ref|ZP_06888222.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Methylosinus trichosporium OB3b]
gi|296256177|gb|EFH03258.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Methylosinus trichosporium OB3b]
Length = 457
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 98/269 (36%), Positives = 155/269 (57%), Gaps = 1/269 (0%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+ +F+ FE +VA RY+ + R N F+S+ + SF+G+ +GV LIVVMSVMNGF ++++ +
Sbjct: 42 LRLFAPFEWVVALRYVRARRANGFVSVIAGFSFLGITLGVATLIVVMSVMNGFHKELMDK 101
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
++GI+GH +Q PL D+ + +++ +P V+P V G A G SG LVRG
Sbjct: 102 IVGIDGHAFVQAVERPLTDWAQVTDQMQRLPGAKLVIPMVEG-AAGISSPYGQSGALVRG 160
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ D L FD GV +G+ LA LGI +GD +++L G TP
Sbjct: 161 MREQDLLRLPGMTGNVKDGTLEGFDAAGGVALGQRLAETLGIRVGDSVSLLIAKGASTPF 220
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G+ R K+Y V+ +F++ +YD VYM L E+QL+FN EN + IE F+ DP A++K
Sbjct: 221 GVAPRIKAYPVVAIFQIGMSEYDRVFVYMPLAESQLFFNRENEATVIEAFIDDPQAVDKF 280
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ + +++ DW+QR + FF +
Sbjct: 281 RADVETKIDRPLILTDWRQRNKTFFDTLQ 309
>gi|167581343|ref|ZP_02374217.1| lipoprotein releasing system transmembrane protein, putative
[Burkholderia thailandensis TXDOH]
gi|167619423|ref|ZP_02388054.1| lipoprotein releasing system transmembrane protein, putative
[Burkholderia thailandensis Bt4]
gi|257138620|ref|ZP_05586882.1| lipoprotein releasing system transmembrane protein, putative
[Burkholderia thailandensis E264]
Length = 417
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 77/270 (28%), Positives = 137/270 (50%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY + ++ N FIS + +S +G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MKLPYEWQIGWRYTRAGKRTTGNGFISFIALVSMLGIALGVAALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV I + D+Q A VI P+V QA ++ + +L
Sbjct: 61 RMLSVLAHVEIFSPTGSMPDWQLTAKEARLNRSVIGAAPYVDAQALLTRQDAVSGVMLRG 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + G ++ G+++G LA NLG+ +GDK+ +++P G +TP
Sbjct: 121 VEPSLEPQVSDIGKDMKAGALTALAPGQFGIVLGNALAGNLGVGVGDKVTLVAPEGTITP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
GM R K +TV+G+F +YD+ + + +Q+AQ F L A +G+ + + D +
Sbjct: 181 AGMMPRLKQFTVVGIFESGHYEYDSTLAMIDIQDAQALFRLP-APTGVRLRLTDMQKAPQ 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L + + DW Q+ + +FS +
Sbjct: 240 VARELAHTLSGDLYIRDWTQQNKTWFSAVQ 269
>gi|27379987|ref|NP_771516.1| ABC transporter permease [Bradyrhizobium japonicum USDA 110]
gi|27353141|dbj|BAC50141.1| bll4876 [Bradyrhizobium japonicum USDA 110]
Length = 426
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 106/266 (39%), Positives = 160/266 (60%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE +++ RYL + RK FIS+ + SF+G+M+GV LI+VM+VMNGFR++++ ++LG
Sbjct: 14 FAPFEWMLSARYLRARRKEGFISVIAGFSFLGIMLGVATLIIVMAVMNGFRKELLDKILG 73
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGH+++Q PL D++ +A+R+ + + P V GQA S SGVLVRGI +
Sbjct: 74 LNGHILVQPLESPLTDWKDVADRISQVQGIRLAAPVVDGQALASSPW-NASGVLVRGIRS 132
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D + L + FD G+GV IG+ LA L + GD I +++P G VTPMG
Sbjct: 133 DDLNNLTSIAKNIKQGSLEGFDDGQGVAIGRRLADQLSLHAGDSITLVAPKGAVTPMGTT 192
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K Y ++ +F + +YD G V+M L EAQ YFN N V+ IEVF +PD I ++
Sbjct: 193 PRIKPYKIVAVFEIGMSEYDLGFVFMPLAEAQAYFNRSNDVTSIEVFTTNPDRIVAFNKA 252
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ V ++DW+QR FF+ +
Sbjct: 253 VTEAAARPVFLVDWRQRNSTFFNALQ 278
>gi|110633395|ref|YP_673603.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Mesorhizobium sp. BNC1]
gi|110284379|gb|ABG62438.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Chelativorans sp. BNC1]
Length = 427
Score = 160 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 116/266 (43%), Positives = 163/266 (61%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE +VAWRYL S RK +S+ + ISF+G+M+GV LIVVM+VMNGFR +++ R+LG
Sbjct: 14 FSYFERLVAWRYLRSRRKETVVSVIALISFLGIMLGVATLIVVMAVMNGFRGELLTRILG 73
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGH+++Q PL DY +A R+ +P V +P V GQ SG S GSG LVRG+
Sbjct: 74 VNGHIIVQPVDSPLSDYDAVAGRIAQVPGVRDAMPIVEGQVLASGRSGAGSGALVRGVRA 133
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D + + DF G+GV IG +A++LG+++GD I +++P GDVTP G
Sbjct: 134 EDLTKIDLVAKNIRVGSLVDFAAGQGVAIGSRMAQSLGLAVGDSITLVAPEGDVTPFGTT 193
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R KSY V +F + +YD ++YM L+EAQL+FN+E V IEVF PD +
Sbjct: 194 PRVKSYPVTAVFEIGMSEYDASIIYMPLEEAQLFFNVEGLVQFIEVFADHPDNVGTLRPL 253
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ V + DW+QR Q+FFS +
Sbjct: 254 VEEAAMRPVSISDWRQRNQVFFSALQ 279
>gi|76811050|ref|YP_334104.1| lipoprotein releasing system transmembrane protein [Burkholderia
pseudomallei 1710b]
gi|254261199|ref|ZP_04952253.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia pseudomallei 1710a]
gi|76580503|gb|ABA49978.1| lipoprotein releasing system transmembrane protein, putative
[Burkholderia pseudomallei 1710b]
gi|254219888|gb|EET09272.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia pseudomallei 1710a]
Length = 417
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 78/270 (28%), Positives = 138/270 (51%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY + ++ N FIS +F+S +G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MKLPYEWQIGWRYTRAGKRTTGNGFISFIAFVSMLGIALGVAALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV I + D+Q A VI P+V QA ++ + +L
Sbjct: 61 RMLSVLAHVEIFSPTGSMPDWQLTAKEARLNRSVIGAAPYVDAQALLTRQDAVSGVMLRG 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + G ++ G+++G LA NLG+ +GDK+ +++P G +TP
Sbjct: 121 VEPSLEPQVSDIGKDMKAGALTALAPGQFGIVLGNALAGNLGVGVGDKVTLVAPEGTITP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
GM R K +TV+G+F +YD+ + + +Q+AQ F L A +G+ + + D +
Sbjct: 181 AGMMPRLKQFTVVGIFESGHYEYDSTLAMIDIQDAQALFRLP-APTGVRLRLTDMQKAPQ 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L + + DW Q+ + +FS +
Sbjct: 240 VARELAHTLSGDLYIRDWTQQNKTWFSAVQ 269
>gi|295676929|ref|YP_003605453.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia sp. CCGE1002]
gi|295436772|gb|ADG15942.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia sp. CCGE1002]
Length = 417
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 78/270 (28%), Positives = 137/270 (50%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY + ++ N FIS + +S G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MKFPYEWQIGWRYTRAGKRTTGNGFISFIALVSMSGIALGVAALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV I + ++Q A VI P+V QA ++ + L
Sbjct: 61 RMLSVLAHVEIFSPTGSMPEWQLTAKEARQNQQVIGAAPYVEAQALLTRQDAVSGVALRG 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ G +S+ G+++G DLA NLG+ + DKI +++P G +TP
Sbjct: 121 IEPTLEPEVSDIGKEMKGGKLSDLVPGDFGIVLGADLAANLGVQLNDKITLVAPEGTITP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
GM R K +TV+G+F +YD+ + +++++AQ F L A +G+ + + D +
Sbjct: 181 AGMLPRLKQFTVVGIFESGHYEYDSTLALINIKDAQALFRLP-APTGVRLRLTDMQRAPE 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ R L + + DW Q+ + +FS +
Sbjct: 240 VAHQLARTLSGDLYIRDWTQQNKTWFSAVQ 269
>gi|187924544|ref|YP_001896186.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia phytofirmans PsJN]
gi|187715738|gb|ACD16962.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia phytofirmans PsJN]
Length = 417
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 78/270 (28%), Positives = 140/270 (51%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY + ++ N FIS + +S G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MKFPYEWQIGWRYTRAGKRTTGNGFISFIALVSMSGIALGVAALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV I + D+Q A +VI P+V QA ++ + L
Sbjct: 61 RMLSVLAHVEIFSPTGSMPDWQLTAKEARQNKEVIGAAPYVEAQALLTRQDAVSGVALRG 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + G+++ G+++G DLA NLG+++ DKI +++P G +TP
Sbjct: 121 VEPSLEPQVSDIGKEMKGGSLNALVPGDFGIVLGADLATNLGVTVNDKITLVAPEGTITP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
GM R K +TV+G+F +YD+ + +++++AQ F L A +G+ + + D +
Sbjct: 181 AGMLPRLKQFTVVGIFESGHYEYDSTLALINIKDAQALFRLP-APTGVRLRLTDMQRAPE 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ R L + + DW Q+ + +FS +
Sbjct: 240 VAHQLARTLSGDLYIRDWTQQNKTWFSAVQ 269
>gi|220924024|ref|YP_002499326.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Methylobacterium nodulans ORS 2060]
gi|219948631|gb|ACL59023.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Methylobacterium nodulans ORS 2060]
Length = 428
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 108/266 (40%), Positives = 153/266 (57%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE ++A RYL + RK F+S + SF+G+M+GV LI+V+SVM+GFR++++ +++G
Sbjct: 20 FAPFEWVIAGRYLRTRRKEGFVSAIALFSFLGIMLGVATLIIVLSVMSGFRKELLSKIVG 79
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
INGHV + PL DY ++ RL + V LP V GQAF S GGSGVLVRG+
Sbjct: 80 INGHVFVAPIDKPLTDYADLSERLSKVAGVSLALPMVEGQAFASSPY-GGSGVLVRGVRA 138
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D +Q G FD GV IG+ LA LG+ GD I + +P G TP G
Sbjct: 139 EDLKKIQAVSGNIRGGTLEGFDTAGGVAIGRRLAEALGLQAGDTITLATPKGATTPFGTA 198
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K Y V +F + ++D VYM L EAQ +FN + V+ IEVF+ + D++ +
Sbjct: 199 PRIKGYNVAAIFEVGMSEFDATFVYMPLSEAQGFFNRDGDVTVIEVFLDNADSVGELRSA 258
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ VV+ DW+QR + FFS E
Sbjct: 259 LELAAERPVVLTDWRQRNRTFFSALE 284
>gi|170742530|ref|YP_001771185.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Methylobacterium sp. 4-46]
gi|168196804|gb|ACA18751.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Methylobacterium sp. 4-46]
Length = 433
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 109/266 (40%), Positives = 157/266 (59%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE ++A RYL + RK F+S + SF+G+M+GV LI+V+SVM+GFR++++ +++G
Sbjct: 25 FAPFEWVIAGRYLRTRRKEGFVSAIALFSFLGIMLGVATLIIVLSVMSGFRKELLSKIVG 84
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
INGHV + PL DY ++ RL + V LP V GQAF S GGSGVLVRG+
Sbjct: 85 INGHVFVAPIDKPLTDYADLSERLSKVAGVTLALPMVEGQAFASSAY-GGSGVLVRGVRA 143
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
SD + ++ G +FD GV IG+ LA LG+ +GD I + +P G TP G
Sbjct: 144 SDLAQIRAVSGNLRGGTLENFDAAGGVAIGRRLADALGLQVGDTITLATPKGATTPFGTA 203
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K Y V +F + ++D VYM L EAQ +FN + V+ IEVF+ + DA+ +
Sbjct: 204 PRIKGYAVSAIFEVGMSEFDATFVYMPLTEAQAFFNRDGDVTVIEVFLDNADAVGEVRSA 263
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ VV+ DW+QR + FFS E
Sbjct: 264 LDLAAERPVVLTDWRQRNRTFFSALE 289
>gi|187928053|ref|YP_001898540.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Ralstonia pickettii 12J]
gi|187724943|gb|ACD26108.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Ralstonia pickettii 12J]
Length = 416
Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 73/271 (26%), Positives = 143/271 (52%), Gaps = 5/271 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY ++++ N+FIS S IS +G+ +GV ALI+V+SVMNGF++++
Sbjct: 1 MKLPYEWQIGWRYTRASKRASRNSFISFISLISMLGIALGVAALIIVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + H+ + L D+Q AN +VI P+V QA ++ + +L
Sbjct: 61 RMLSVLAHIEV-MAPNSLPDWQRTANEAMQNKEVIGAAPYVGAQAMITRDEAVRGVLLRG 119
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + G++ + G+ +G LA LG+ GDK+ +++P G +TP
Sbjct: 120 VSPADEPKVSDIAKDFKSGSIDDLKPGEFGIALGSQLANGLGVHQGDKVTLVAPQGTITP 179
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
G+ R K +TV G+F ++D+ + +++++A+ F L+ +G+ + + D D +
Sbjct: 180 AGVLPRLKQFTVTGIFESGHYEFDSSLALVNMEDAERLFRLDGP-TGVRLKLVDMDRAPQ 238
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYES 270
E + R L + + DW ++ + +F+ ++
Sbjct: 239 VAEALSRTLSGELYIRDWSRQNRNWFAAVKT 269
>gi|167586756|ref|ZP_02379144.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia ubonensis Bu]
Length = 417
Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats.
Identities = 76/270 (28%), Positives = 140/270 (51%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY + ++ N FIS + +S +G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MKLPYEWQIGWRYTRAGKRTTGNGFISFIALVSMLGIALGVAALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV + + D+Q A P V P+V QA ++ + +L
Sbjct: 61 RMLSVLAHVEVFSPTGQMPDWQLTAQEARRNPSVTGAAPYVEAQALLTRQDAVSGVMLRG 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + + G ++ G+++G LA NLG+++GDK+ +++P G +TP
Sbjct: 121 IEPSLEPQVSEIGKDMKAGQLTALVPGQFGIVLGDALAGNLGVTVGDKVTLVAPEGTITP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
GM R K +TV+G+F +YD+ + + +++A+ F L +A +G+ + VKD
Sbjct: 181 AGMLPRLKQFTVVGVFESGHYEYDSTLAMIDIRDAEALFRL-SAPTGVRLRVKDMQKAPD 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L + + DW Q+ + +FS +
Sbjct: 240 VAVELSHSLSGSLYIRDWTQQNKTWFSAVK 269
>gi|83719509|ref|YP_442417.1| lipoprotein releasing system transmembrane protein [Burkholderia
thailandensis E264]
gi|83653334|gb|ABC37397.1| lipoprotein releasing system transmembrane protein, putative
[Burkholderia thailandensis E264]
Length = 448
Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats.
Identities = 77/267 (28%), Positives = 136/267 (50%), Gaps = 4/267 (1%)
Query: 6 RFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+E + WRY + ++ N FIS + +S +G+ +GV ALIVV+SVMNGF++++ R+L
Sbjct: 35 PYEWQIGWRYTRAGKRTTGNGFISFIALVSMLGIALGVAALIVVLSVMNGFQKEVRDRML 94
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ HV I + D+Q A VI P+V QA ++ + +L
Sbjct: 95 SVLAHVEIFSPTGSMPDWQLTAKEARLNRSVIGAAPYVDAQALLTRQDAVSGVMLRGVEP 154
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G ++ G+++G LA NLG+ +GDK+ +++P G +TP GM
Sbjct: 155 SLEPQVSDIGKDMKAGALTALAPGQFGIVLGNALAGNLGVGVGDKVTLVAPEGTITPAGM 214
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV+G+F +YD+ + + +Q+AQ F L A +G+ + + D +
Sbjct: 215 MPRLKQFTVVGIFESGHYEYDSTLAMIDIQDAQALFRLP-APTGVRLRLTDMQKAPQVAR 273
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L + + DW Q+ + +FS +
Sbjct: 274 ELAHTLSGDLYIRDWTQQNKTWFSAVQ 300
>gi|312116219|ref|YP_004013815.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Rhodomicrobium vannielii ATCC 17100]
gi|311221348|gb|ADP72716.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Rhodomicrobium vannielii ATCC 17100]
Length = 424
Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats.
Identities = 93/266 (34%), Positives = 153/266 (57%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE ++A+RYL + RK +S+ +F +G+ +GV LI+V+SVMNGFR+++ ++LG
Sbjct: 12 FAPFEWLLAFRYLRARRKKGSVSVIAFFCVLGIALGVATLIIVLSVMNGFRKELFDKILG 71
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGHV+++ P DY +A RL+ + V L V GQ +S +G SGV+VRG+
Sbjct: 72 LNGHVIVRPLARPFTDYDEVAKRLNAVKGVDHALAVVEGQVMIS-SQNGSSGVIVRGLKG 130
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D L++ + FD G+ IG LA L + +G ++ +L+P G TP G
Sbjct: 131 RDLQALKSISGNIRFGTLDGFDDSGGIAIGTRLANTLNVFVGSEVTLLAPKGASTPFGTA 190
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K Y + +F M +YD + +M ++EAQ +FNL AV +EV + +PD +E+
Sbjct: 191 PRVKRYRIAAVFEMGMSEYDGSIAFMPMKEAQGFFNLGEAVHVLEVVIDNPDNVERMRGV 250
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ G +++ DW+QR F++ +
Sbjct: 251 LQDAGGPDMLLTDWRQRNATFYNTLK 276
>gi|288940583|ref|YP_003442823.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Allochromatium vinosum DSM 180]
gi|288895955|gb|ADC61791.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Allochromatium vinosum DSM 180]
Length = 416
Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats.
Identities = 73/267 (27%), Positives = 129/267 (48%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+N FIS S S +G+ +G++ALIVV+SVMNGF +++ +R+L
Sbjct: 1 MFHPLSLYIGLRYTRAKRRNHFISFISGTSMVGIALGIVALIVVLSVMNGFHKEIQQRIL 60
Query: 63 GINGH-VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ H + + D+ + ++ P V+ PF+ Q ++ + V+
Sbjct: 61 AMASHATLSDPYGGGIADWPQVLEQVRAHPRVVGAAPFIEIQGMLASGAQVSGAVVRAIE 120
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ G+V + +I+G+DLA LG+ GDK+ +++P TP+G
Sbjct: 121 PVEEDEVADLRRHMVSGSVDALVNGAFNIILGQDLANYLGVGPGDKVTVVTPQVSSTPVG 180
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ R K +TV G+F + DYD ++ L + +L AV G+ + + D +
Sbjct: 181 VMPRLKRFTVSGIFAVGMADYDRNAAFIHLADGARLMSLGEAVGGVRLKLDDMWQAPRLA 240
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
I LG ++DW Q + FFS
Sbjct: 241 REIAYELGGVYRLVDWTQVHSNFFSAL 267
>gi|302343541|ref|YP_003808070.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Desulfarculus baarsii DSM 2075]
gi|301640154|gb|ADK85476.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Desulfarculus baarsii DSM 2075]
Length = 407
Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats.
Identities = 88/265 (33%), Positives = 140/265 (52%), Gaps = 2/265 (0%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
FE VA RYL S RK AFIS+ + +S GV +GV ALIVV+SVM GF+ + K++LG +
Sbjct: 3 FESFVALRYLRSRRKQAFISVITMLSMAGVALGVCALIVVLSVMGGFQREWQKKILGQSS 62
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
HV++ + D + + ++ PDV V PFV GQ + G +L S
Sbjct: 63 HVLVHGLSGSIDDPEAVMAKVRQDPDVTAVAPFVYGQVMLLAPGDAGGALLRGIDVASAA 122
Query: 127 SYLQNSFSRFYGNVS--NDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
L G++S +D G+I+G +AR++G+ +G +++++P GD TP+G
Sbjct: 123 KVLDLQEIMISGSLSALDDGRTPPGIIVGAAMARSMGLHMGSVVSVVNPLGDDTPVGRLP 182
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
RS+ + V+G+F YD+ + Y+SL + +F L AVSG+EV ++D + +
Sbjct: 183 RSEPFRVVGVFESGMYQYDSSVCYVSLAAGREFFGLGGAVSGLEVNIRDIYKAPEVAARL 242
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
LG DW + F+ +
Sbjct: 243 TEALGFEYYTRDWIRMNHTLFAALK 267
>gi|296158322|ref|ZP_06841153.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia sp. Ch1-1]
gi|295891266|gb|EFG71053.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia sp. Ch1-1]
Length = 417
Score = 159 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 77/270 (28%), Positives = 140/270 (51%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY + ++ N FIS + +S G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MKFPYEWQIGWRYTRAGKRTTGNGFISFIALVSMSGIALGVAALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV I + ++Q A +VI P+V QA ++ + L
Sbjct: 61 RMLSVLAHVEIFSPTGSMPNWQLTAQEARQNKEVIGAAPYVEAQALLTRQDAVSGVALRG 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + G+++ G+++G DLA NLG+++ DKI +++P G +TP
Sbjct: 121 VEPSLEPQVSDIGKEMKGGSLNALVPGDFGIVLGADLATNLGVAVNDKITLVAPEGTITP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
GM R K +TV+G+F +YD+ + +++++AQ F L A +G+ + + D +
Sbjct: 181 AGMLPRLKQFTVVGIFESGHYEYDSTLALINIKDAQALFRLP-APTGVRLRLTDMQRAPE 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ R L + + DW Q+ + +FS +
Sbjct: 240 VAHQLARSLSGDLYIRDWTQQNKTWFSAVQ 269
>gi|309781216|ref|ZP_07675953.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Ralstonia sp. 5_7_47FAA]
gi|308920037|gb|EFP65697.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Ralstonia sp. 5_7_47FAA]
Length = 416
Score = 159 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 73/271 (26%), Positives = 141/271 (52%), Gaps = 5/271 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY ++++ N+FIS S IS +G+ +GV ALI+V+SVMNGF++++
Sbjct: 1 MKLPYEWQIGWRYTRASKRASRNSFISFISLISMLGIALGVAALIIVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + H+ + L D+Q AN +VI P+V QA ++ + +L
Sbjct: 61 RMLSVLAHIEV-MAPNSLPDWQRTANEAMQNKEVIGAAPYVGAQAMITRDEAVRGVLLRG 119
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + G + + G+ +G LA LG+ GDK+ +++P G +TP
Sbjct: 120 VSPADEPKVSDIAKDFKSGTIDDLKPGEFGIALGSQLANGLGVHQGDKVTLVAPQGTITP 179
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
G+ R K +TV G+F ++D+ + +++ +A+ F L+ +G+ + + D D +
Sbjct: 180 AGVLPRLKQFTVTGIFESGHYEFDSSLALVNMDDAERLFRLDGP-TGVRLKLVDMDRAPQ 238
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYES 270
E + R L + + DW ++ + +F+ ++
Sbjct: 239 VAEALSRTLSGELYIRDWSRQNRNWFAAVKT 269
>gi|241662660|ref|YP_002981020.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Ralstonia pickettii 12D]
gi|240864687|gb|ACS62348.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Ralstonia pickettii 12D]
Length = 416
Score = 159 bits (400), Expect = 5e-37, Method: Composition-based stats.
Identities = 73/271 (26%), Positives = 141/271 (52%), Gaps = 5/271 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY ++++ N+FIS S IS +G+ +GV ALI+V+SVMNGF++++
Sbjct: 1 MKLPYEWQIGWRYTRASKRASRNSFISFISLISMLGIALGVAALIIVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + H+ + L D+Q AN +VI P+V QA ++ + +L
Sbjct: 61 RMLSVLAHIEV-MAPNSLPDWQRTANEAMQNKEVIGAAPYVGAQAMITRDEAVRGVLLRG 119
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + G + + G+ +G LA LG+ GDK+ +++P G +TP
Sbjct: 120 VSPADEPKVSDIAKDFKSGTIDDLKPGEFGIALGSQLANGLGVHQGDKVTLVAPQGTITP 179
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
G+ R K +TV G+F ++D+ + +++ +A+ F L+ +G+ + + D D +
Sbjct: 180 AGVLPRLKQFTVTGIFESGHYEFDSSLALVNMDDAERLFRLDGP-TGVRLKLVDMDRAPQ 238
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYES 270
E + R L + + DW ++ + +F+ ++
Sbjct: 239 VAEALSRTLSGELYIRDWSRQNRNWFAAVKT 269
>gi|158423311|ref|YP_001524603.1| lipoprotein releasing system transmembrane protein [Azorhizobium
caulinodans ORS 571]
gi|158330200|dbj|BAF87685.1| lipoprotein releasing system transmembrane protein [Azorhizobium
caulinodans ORS 571]
Length = 440
Score = 159 bits (400), Expect = 5e-37, Method: Composition-based stats.
Identities = 99/266 (37%), Positives = 159/266 (59%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE +++ RYL + RK FIS+ + SF+G+++GV LI+VM+VMNGFR++++ ++LG
Sbjct: 28 FAAFEWMLSLRYLRARRKEGFISVIAGFSFVGIVLGVATLIIVMAVMNGFRQELLGKILG 87
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGH+++Q L DY +A+R+ + + +P V GQA S SGVLVRG++
Sbjct: 88 LNGHMLVQPLENALTDYTAVADRISKLNGIKLAVPVVEGQALASSPY-NASGVLVRGLAE 146
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D + + + + FD+G+G+ IGK LA L + GD I +++P G VTPMG
Sbjct: 147 KDLRSMPSVANNIRQGTLDGFDQGQGLAIGKRLADQLSLRAGDNITLVAPRGSVTPMGTS 206
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K Y + +F + +YD+ V+M L EAQ YFN V+ IEV++ +PD + +
Sbjct: 207 PRIKVYKIAAVFEIGMSEYDSAFVFMPLPEAQAYFNRNGDVNAIEVYIANPDDVGELRGA 266
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ V ++DW+QR FF+ +
Sbjct: 267 VQAAAQRPVYIVDWRQRNATFFNALQ 292
>gi|91784235|ref|YP_559441.1| ABC lipoprotein efflux pump, inner membrane subunit [Burkholderia
xenovorans LB400]
gi|91688189|gb|ABE31389.1| ABC lipoprotein efflux pump, inner membrane subunit [Burkholderia
xenovorans LB400]
Length = 417
Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats.
Identities = 77/270 (28%), Positives = 140/270 (51%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY + ++ N FIS + +S G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MKFPYEWQIGWRYTRAGKRTTGNGFISFIALVSMSGIALGVAALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV I + ++Q A +VI P+V QA ++ + L
Sbjct: 61 RMLSVLAHVEIFSPTGSMPNWQLTAQEARQNKEVIGAAPYVEAQALLTRQDAVSGVALRG 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + G+++ G+++G DLA NLG+++ DKI +++P G +TP
Sbjct: 121 VEPSLEPQVSDIGKEMKGGSLNALVPGDFGIVLGADLATNLGVTVNDKITLVAPEGTITP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
GM R K +TV+G+F +YD+ + +++++AQ F L A +G+ + + D +
Sbjct: 181 AGMLPRLKQFTVVGIFESGHYEYDSTLALINIKDAQALFRLP-APTGVRLRLTDMQRAPE 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ R L + + DW Q+ + +FS +
Sbjct: 240 VAHQLARSLSGDLYIRDWTQQNKTWFSAVQ 269
>gi|163795648|ref|ZP_02189614.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[alpha proteobacterium BAL199]
gi|159179247|gb|EDP63780.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[alpha proteobacterium BAL199]
Length = 415
Score = 158 bits (399), Expect = 7e-37, Method: Composition-based stats.
Identities = 92/267 (34%), Positives = 154/267 (57%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
IF FE ++A RYL + R+ FIS+ + S +G+ +GV LI+VMSVMNGFR +++ R+L
Sbjct: 2 IFGAFERMLAMRYLRARRQEGFISVIAGFSLLGIGLGVATLIIVMSVMNGFRTELMGRIL 61
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+NGH + + + D+ +A ++ IP + V P V GQA + + SG +VRG+
Sbjct: 62 GLNGHAAVYSRTGHIEDFDQVAVQVASIPGIFSVTPQVEGQAMLV-ANGSASGAVVRGLR 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+D + G + F+ +I+G+ LA L + +GDK+ ++SP VT MG
Sbjct: 121 PTDMKAKRLIAQNIIGGSLDRFEGRDAIILGQRLAERLRLGVGDKVTLISPTSAVTVMGS 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R+K+Y ++G+F + +YDN VYM ++ AQ++F V+ +E+F DP+ I +
Sbjct: 181 IPRTKAYDIVGLFNVGMFEYDNTFVYMPMEAAQVFFQSGQTVNALEIFTTDPNNIRRYRL 240
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ L + + DWQQ+ FF+ +
Sbjct: 241 PLLEALPSDLYFFDWQQQNSSFFNALQ 267
>gi|189423827|ref|YP_001951004.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Geobacter lovleyi SZ]
gi|189420086|gb|ACD94484.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Geobacter lovleyi SZ]
Length = 420
Score = 158 bits (398), Expect = 7e-37, Method: Composition-based stats.
Identities = 92/273 (33%), Positives = 153/273 (56%), Gaps = 5/273 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ FE+ + RYL + RK+ FISI +FIS GV +GVMALIVV++VM GF D+ +++L
Sbjct: 1 MALPFELKIGLRYLKAKRKSTFISIITFISTAGVTLGVMALIVVLAVMTGFERDLKEKIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G N H+V+ + P+ DY+ + RL +P V V PF+ Q +S VL
Sbjct: 61 GTNAHLVVIRSGAPMDDYRSMMERLQQLPGVEAVTPFIYNQVMLSTGRHVSGVVLRGIDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRG-----KGVIIGKDLARNLGISIGDKINILSPYGDV 177
SD + S + G + + G++IG++LA++L + +GD++N++SP G +
Sbjct: 121 ASDKKVTRLSRTIVQGTMDSLDPPRGSDADPGIMIGRELAKHLNLFLGDRVNVVSPTGTI 180
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
TP+GM + K + V G+F +YD+ + Y+S+ +AQ +F+L + V+GI++ V D A
Sbjct: 181 TPLGMMPKLKPFKVTGIFNTGMFEYDSTLAYVSINQAQKFFDLGDTVTGIQLKVADVYAT 240
Query: 238 EKTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ + I R G + DW Q + ++
Sbjct: 241 TELAKKINRTYGPDLYARDWMQMNRNILFALKT 273
>gi|170694752|ref|ZP_02885903.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia graminis C4D1M]
gi|170140383|gb|EDT08560.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia graminis C4D1M]
Length = 417
Score = 158 bits (398), Expect = 7e-37, Method: Composition-based stats.
Identities = 77/270 (28%), Positives = 139/270 (51%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY + ++ N FIS + +S G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MKFPYEWQIGWRYTRAGKRTTGNGFISFIALVSMSGIALGVAALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV I + ++Q A +VI P+V QA ++ + L
Sbjct: 61 RMLSVLAHVEIFSPTGSMPNWQLTAQEARQNKEVIGAAPYVEAQALLTRQDAVSGVALRG 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ G +++ G+++G DLA NLG+++ DKI +++P G +TP
Sbjct: 121 IEPALEPQVSDIGKEMKGGKLTDLVPGEFGIVLGADLATNLGVAVNDKITLVAPEGTITP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
GM R K +TV+G+F +YD+ + +++++AQ F L A +G+ + + D +
Sbjct: 181 AGMLPRLKQFTVVGIFESGHYEYDSTLALINIKDAQALFRLP-APTGVRLRLADMQRAPE 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ R L + + DW Q+ + +FS +
Sbjct: 240 VAHQLARSLSGDLYIRDWTQQNKTWFSAVQ 269
>gi|217976886|ref|YP_002361033.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Methylocella silvestris BL2]
gi|217502262|gb|ACK49671.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Methylocella silvestris BL2]
Length = 423
Score = 158 bits (398), Expect = 7e-37, Method: Composition-based stats.
Identities = 95/265 (35%), Positives = 154/265 (58%), Gaps = 2/265 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE +VA RYL + R + F+S+ + SF+G+++GV LIVVMSVMNGF ++++ +++G
Sbjct: 12 FAAFEWMVALRYLRARRSSGFVSVIAGFSFLGIVLGVATLIVVMSVMNGFHKELLDKIVG 71
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
INGH+ +Q PL DY ++ + +P V +P + + + ++ + LVRG+
Sbjct: 72 INGHIFLQATDSPLTDYDEVSREVGSLPGVQLAIPMI--EGPAAVSTTNMAFALVRGVRE 129
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D L FD+ GV IG+ +A NLG+ +GDKI +L G TP G+
Sbjct: 130 GDIKRLPGIAGNVRAGTLEGFDKAGGVAIGQRIADNLGLRVGDKIKVLIANGPQTPFGVA 189
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
RSK Y V +F++ ++DN VYM L EAQ +F+ +N S IEVF+ P+ ++
Sbjct: 190 PRSKVYPVTAIFQIGMAEFDNLFVYMPLPEAQGFFSKDNEASVIEVFLNRPEDLDAVRAR 249
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCY 268
I +I+ +++ DW++R + FF
Sbjct: 250 IDQIVTRPMIMTDWRERNRTFFDAL 274
>gi|207722853|ref|YP_002253287.1| lipoprotein releasing system protein [Ralstonia solanacearum MolK2]
gi|207743544|ref|YP_002259936.1| lipoprotein releasing system protein [Ralstonia solanacearum
IPO1609]
gi|300704513|ref|YP_003746116.1| outer membrane-specific lipoprotein transporter subunit; membrane
component of ABC superfamily [Ralstonia solanacearum
CFBP2957]
gi|206588037|emb|CAQ18617.1| lipoprotein releasing system protein [Ralstonia solanacearum MolK2]
gi|206594942|emb|CAQ61869.1| lipoprotein releasing system protein [Ralstonia solanacearum
IPO1609]
gi|299072177|emb|CBJ43509.1| outer membrane-specific lipoprotein transporter subunit ; membrane
component of ABC superfamily [Ralstonia solanacearum
CFBP2957]
Length = 416
Score = 158 bits (398), Expect = 8e-37, Method: Composition-based stats.
Identities = 74/271 (27%), Positives = 140/271 (51%), Gaps = 5/271 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY + ++ N+FIS S IS +G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MKVPYEWQIGWRYTRAGKRATRNSFISFISLISMLGIALGVTALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + H+ I L D+Q AN +V+ P+V QA ++ + +L
Sbjct: 61 RMLSVLSHIEI-MAPGSLPDWQRTANEALQNKEVVGAAPYVGAQAMITRDDAVRGVLLRG 119
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + G + + G+ +G +LAR LG+ GDK+ +++P G +TP
Sbjct: 120 VSPADEPKVSDIAKDFKSGGIDDLKPGEFGIALGSELARGLGVRQGDKVTLVAPQGTITP 179
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
G+ R K +TV+G F ++D+ + + + +A+ F L+ +G+ + + D +
Sbjct: 180 AGVLPRMKQFTVIGTFESGHYEFDSSLALIHIDDAERLFRLDGP-TGVRLKLVDMQRAPQ 238
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYES 270
E + R L + + DW ++ + +F+ ++
Sbjct: 239 VAEALSRTLTGELYIRDWSRQNKNWFAAVQT 269
>gi|296536134|ref|ZP_06898263.1| lipoprotein ABC superfamily ATP binding cassette transporter,
membrane protein [Roseomonas cervicalis ATCC 49957]
gi|296263546|gb|EFH10042.1| lipoprotein ABC superfamily ATP binding cassette transporter,
membrane protein [Roseomonas cervicalis ATCC 49957]
Length = 421
Score = 158 bits (398), Expect = 8e-37, Method: Composition-based stats.
Identities = 100/273 (36%), Positives = 149/273 (54%), Gaps = 6/273 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F FE VA+RYL + + F+S+ + S +G+ +GV LI+VMSVMNGFR++++ R+L
Sbjct: 1 MFGAFERKVAFRYLRARKGERFVSVIATFSLVGIALGVATLIIVMSVMNGFRQELLGRIL 60
Query: 63 GINGHVVIQ-----QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVL 117
G+NGH+ I + DY IA R+ + V P V GQ ++ + G +G +
Sbjct: 61 GLNGHLGIHAAASGPGGGGIRDYDAIAERVRQMAGVASATPIVEGQVLMTSEAGGATGGI 120
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
RGI D ++F ++IG LA+ LG+ +G KI ++SP G
Sbjct: 121 ARGIKPEDLRARPLLAGNIRAGSLDNFQGDDAILIGTRLAQKLGLGVGSKITLVSPQGRS 180
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
T +G R K+YTV+ +F +YD+G V++ L AQ+YF L +A S IEVFV DPD +
Sbjct: 181 TVIGTVPRLKAYTVVALFEAGMNEYDSGYVFLPLPAAQVYFQLRDAASMIEVFVNDPDNV 240
Query: 238 EKTHENIVRILGN-GVVVIDWQQRYQIFFSCYE 269
IVR L V V+DWQ FF+ +
Sbjct: 241 RAVTREIVRGLSPLPVRVLDWQAANSSFFAAVQ 273
>gi|89092895|ref|ZP_01165847.1| transport protein of outer membrane lipoproteins (ABC superfamily,
membrane) [Oceanospirillum sp. MED92]
gi|89082920|gb|EAR62140.1| transport protein of outer membrane lipoproteins (ABC superfamily,
membrane) [Oceanospirillum sp. MED92]
Length = 414
Score = 158 bits (398), Expect = 8e-37, Method: Composition-based stats.
Identities = 73/267 (27%), Positives = 125/267 (46%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R N FIS S S +G+M+GV ALIVV+SVMNGF ++ +R+L
Sbjct: 1 MFKPLSIFIGLRYTAAKRSNHFISFISMASMLGLMLGVAALIVVLSVMNGFDRELKQRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I PL ++ + +L+ P+VI PFV Q ++ ++
Sbjct: 61 GMVPHATISGYGKPLDNWSELIEQLESNPEVIAAAPFVQAQGMLTSRGVVRGAMVNGINP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G++ ++ G+++G+ LAR LG IGDK+ ++ P V+ G+
Sbjct: 121 EIEKNVSILGNHIESGSLDALNEQRFGIVLGEILARYLGAKIGDKVTLVLPEASVSVAGV 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV+G+F + D + Y+ +++A + V GI + D
Sbjct: 181 VPRLKRFTVVGIF-SVGAELDANLAYIHMRDAAKIKRIGEGVDGIRLKFDDLFTAPTKVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I L DW + + F +
Sbjct: 240 AIAAELDGYYYASDWTRTHGNLFQAIQ 266
>gi|328543707|ref|YP_004303816.1| ABC transporter, permease protein [Polymorphum gilvum SL003B-26A1]
gi|326413451|gb|ADZ70514.1| ABC transporter, permease protein [Polymorphum gilvum SL003B-26A1]
Length = 434
Score = 158 bits (398), Expect = 8e-37, Method: Composition-based stats.
Identities = 107/266 (40%), Positives = 162/266 (60%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE ++A RYL S R+ AFIS+ + SF+G+M+GV LI+VM+VMNGFR +++ ++LG
Sbjct: 22 FAAFEWMIAGRYLRSRRREAFISVIAGFSFVGIMLGVATLIIVMAVMNGFRSELLTKILG 81
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
INGH+++Q PL DY +A RL+ + V+ +PFV GQA VSG + ++
Sbjct: 82 INGHMLVQPIDQPLTDYDAVAARLEGVSGVVAAMPFVEGQAMVSGPAGNFGALVRGLWEA 141
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
L + FD G GV IG +A+ LG+++GD + I+SP G VTPMG+
Sbjct: 142 DI-RRLPLVAGNVRAGSLDGFDEGGGVAIGTRMAQQLGLAVGDNVTIISPRGAVTPMGVT 200
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R KSY +L +F + +YD+ +++M L+EAQ+YF +E +G+EV+V+DPD + +
Sbjct: 201 PRLKSYPILAVFEIGMSEYDSTILFMPLEEAQVYFRMEGKATGVEVYVEDPDKVGAMRAS 260
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ V DW+QR FFS E
Sbjct: 261 VEDGAARPAFVTDWRQRNVTFFSALE 286
>gi|253702016|ref|YP_003023205.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Geobacter sp. M21]
gi|251776866|gb|ACT19447.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Geobacter sp. M21]
Length = 416
Score = 158 bits (398), Expect = 9e-37, Method: Composition-based stats.
Identities = 87/270 (32%), Positives = 152/270 (56%), Gaps = 5/270 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
FE+ + RYL + RK+ FIS+ + IS GV +GVMALI+V++VM GF ED+ ++LG
Sbjct: 1 MPFELFIGLRYLKAKRKSTFISLITLISVAGVALGVMALIIVLAVMTGFEEDLKDKILGT 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N H+V+ + +Y + +L+ + V PF+ Q +S SGV++RGI
Sbjct: 61 NAHIVVLSSLGAVQEYPQVIKKLEGMDGVQAATPFIYNQVMLSTG-KNVSGVVLRGIDVK 119
Query: 125 DFSYLQNSFSRFYGNV----SNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + N N+ + GV++GK+LA+NLG+ +GD ++++SP G++TP+
Sbjct: 120 SDARVTNLHKSMVEGKLETLENEVGKTPGVVVGKELAKNLGLFLGDTVDVISPMGNITPL 179
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
GM + + + G+F +YD+ + Y+SL+EAQ + +L + V+G+++ V+D ++
Sbjct: 180 GMMPKLNRFRITGIFNTGMFEYDSTLAYVSLREAQQFLDLGDVVTGVQLKVRDVYKADQL 239
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ I R LG DW Q + ++
Sbjct: 240 AQQINRELGPPYHARDWMQMNKNILFALKT 269
>gi|85860097|ref|YP_462299.1| lipoprotein releasing system, permease component [Syntrophus
aciditrophicus SB]
gi|85723188|gb|ABC78131.1| lipoprotein releasing system, permease component [Syntrophus
aciditrophicus SB]
Length = 425
Score = 158 bits (398), Expect = 9e-37, Method: Composition-based stats.
Identities = 82/277 (29%), Positives = 140/277 (50%), Gaps = 12/277 (4%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+E + RYL + RK F+SI +FIS G+ +GV ALI+V++VMNGF D+ ++LGI
Sbjct: 1 MSYEFFINLRYLRAKRKQVFVSIITFISIAGIFLGVAALIIVLAVMNGFETDLRNKILGI 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N H+V+ + + +Y + + +P V+ PF+ QA + + VL
Sbjct: 61 NSHIVLMEYQGMMKNYVQVMQEVKEVPGVVATTPFIYSQAMLKSENGMSGVVLRGLSLKD 120
Query: 125 DFSYLQNSFSR------------FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILS 172
F + G + + G++IG++LA+NLG+ + D + I++
Sbjct: 121 AFGVIDLGRMHAGSVQALAEPVRRDGATEGEPEVLPGIVIGRELAKNLGLILHDSVYIIT 180
Query: 173 PYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK 232
P G TPMG R K + V+G+F F +YD+ + Y+SL++ Q + NL++ SG+E+ V
Sbjct: 181 PMGISTPMGYVPRMKKFVVVGIFDSGFYEYDSTLAYLSLRDCQAFLNLDDVASGLEIKVN 240
Query: 233 DPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
D + I + LG W + + F+ +
Sbjct: 241 DIYRADTIARTIEKKLGYPYWARHWMEMNKNLFAALK 277
>gi|258406353|ref|YP_003199095.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Desulfohalobium retbaense DSM 5692]
gi|257798580|gb|ACV69517.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Desulfohalobium retbaense DSM 5692]
Length = 409
Score = 158 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 81/267 (30%), Positives = 129/267 (48%), Gaps = 4/267 (1%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
FE +A RYL + RK FIS+ S IS +GV +GV ALIVV+ VMNGF ++ ++LG+N
Sbjct: 3 FERFIAVRYLLARRKQTFISVISLISVLGVGLGVAALIVVLGVMNGFSNELRDKILGVNA 62
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
HV++ DY+ A + + V V+PF+ + S L
Sbjct: 63 HVIVGATSGGFADYEQTAETVRRVQGVTGVMPFIYSEVMCSTPHGVKGAALRGIDPERAP 122
Query: 127 SYLQNSFSRFYGNVSNDFDR--GKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
L G++ + G+I+G+DLA LG+ G IN+LSP G + G
Sbjct: 123 EVLNLGEQMVQGSLQALTEPGEYPGIILGQDLADRLGVFSGRTINLLSPSGQSSAAGFSP 182
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTHEN 243
+ K + V+G+F +YD+ + Y+ L A+ V+G+EV + D + E
Sbjct: 183 KIKIFRVVGVFESGMYEYDSSLAYVGLPAARDLLGFGGELVTGLEVRLADVYQAPQIGEA 242
Query: 244 IVRIL-GNGVVVIDWQQRYQIFFSCYE 269
++ L + V +W + + FFS +
Sbjct: 243 VLERLDPSRFYVRNWMEMNESFFSALK 269
>gi|323526604|ref|YP_004228757.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia sp. CCGE1001]
gi|323383606|gb|ADX55697.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia sp. CCGE1001]
Length = 417
Score = 158 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 78/270 (28%), Positives = 139/270 (51%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY + ++ N FIS + +S G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MKFPYEWQIGWRYTRAGKRTTGNGFISFIALVSMSGIALGVAALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV I + ++Q A +VI P+V QA ++ + L
Sbjct: 61 RMLSVLAHVEIFSPTGSMPNWQLTAQEARQNKEVIGAAPYVEAQALLTRQDAVSGVALRG 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ G ++N G+++G DLA NLG+++ DKI +++P G +TP
Sbjct: 121 VEPTLEPQVSDIGKEMKGGKLTNLVPGEFGIVLGADLATNLGVAVNDKITLVAPEGTITP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
GM R K +TV+G+F +YD+ + +++++AQ F L A +G+ + + D +
Sbjct: 181 AGMLPRLKQFTVVGIFESGHYEYDSTLALINIKDAQALFRLP-APTGVRLRLVDMQRAPE 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ R L + + DW Q+ + +FS +
Sbjct: 240 VAHQLARTLSGDLYIRDWTQQNKTWFSAVQ 269
>gi|209519982|ref|ZP_03268761.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia sp. H160]
gi|209499579|gb|EDZ99655.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia sp. H160]
Length = 433
Score = 158 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 79/267 (29%), Positives = 136/267 (50%), Gaps = 4/267 (1%)
Query: 6 RFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+E + WRY + ++ N FIS + +S G+ +GV ALIVV+SVMNGF++++ R+L
Sbjct: 20 PYEWQIGWRYTRAGKRTTGNGFISFIALVSMSGIALGVAALIVVLSVMNGFQKEVRDRML 79
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ HV I + D+Q AN VI P+V QA ++ + L
Sbjct: 80 SVLAHVEIFSPTGSMPDWQLTANEARQNKQVIGAAPYVEAQALLTRQDAVSGVALRGIEP 139
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G ++ G+++G DLA NLG+ + DKI +++P G +TP GM
Sbjct: 140 TLEPEVSDIGKEMKGGKLTALVAGDFGIVLGADLAANLGVQLNDKITLVAPEGTITPAGM 199
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV+G+F +YD+ + +++++AQ F L A +G+ + + D +
Sbjct: 200 LPRLKQFTVVGIFESGHYEYDSTLALINIKDAQALFRLP-APTGVRLRLTDMQRAPEVAH 258
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ R L + + DW Q+ + +FS +
Sbjct: 259 QLARTLSGDLYIRDWTQQNKTWFSAVQ 285
>gi|307729223|ref|YP_003906447.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia sp. CCGE1003]
gi|307583758|gb|ADN57156.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia sp. CCGE1003]
Length = 417
Score = 158 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 77/270 (28%), Positives = 139/270 (51%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY + ++ N FIS + +S G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MKFPYEWQIGWRYTRAGKRTTGNGFISFIALVSMSGIALGVAALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV I + ++Q A +VI P+V QA ++ + L
Sbjct: 61 RMLSVLAHVEIFSPTGSMPNWQLTAQEARQNKEVIGAAPYVEAQALLTRQDAVSGVALRG 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ G ++N G+++G DLA NLG+++ D+I +++P G +TP
Sbjct: 121 IEPTLEPQVSDIGKEMKGGKLTNLVPGEFGIVLGADLATNLGVTVNDRITLVAPEGTITP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
GM R K +TV+G+F +YD+ + +++++AQ F L A +G+ + + D +
Sbjct: 181 AGMLPRLKQFTVVGIFESGHYEYDSTLALINIKDAQALFRLP-APTGVRLRLADMQRAPE 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ R L + + DW Q+ + +FS +
Sbjct: 240 VAHQLARSLSGDLYIRDWTQQNKTWFSAVQ 269
>gi|118581420|ref|YP_902670.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pelobacter propionicus DSM 2379]
gi|118504130|gb|ABL00613.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Pelobacter propionicus DSM 2379]
Length = 420
Score = 158 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 99/273 (36%), Positives = 157/273 (57%), Gaps = 7/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
FE+++ RYL + RK+ FISI S IS GV +GVMALIVV++VM GF ED+ +++LG
Sbjct: 1 MPFELLICLRYLKAKRKSTFISIISLISTAGVSLGVMALIVVLAVMTGFEEDLKEKILGT 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N HVV+ + P+ +Y+ + +L +P + PF+ Q +S + VL S
Sbjct: 61 NAHVVVIRNGLPMDEYRQVMEKLTAMPGITAATPFIYNQVMLSSGRNVSGVVLRGIDVPS 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRG-------KGVIIGKDLARNLGISIGDKINILSPYGDV 177
D + + S GN N + G++IGK+LARNL + +GD+IN++SP G++
Sbjct: 121 DRLVTRLNASLVEGNTDNLDPKMGDGAVALPGLLIGKELARNLNLRLGDRINVVSPMGNI 180
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
TP+GM R K + V+G+F +YD+ + Y+SL +AQ +F+L + V+GI++ VKD
Sbjct: 181 TPLGMIPRMKPFRVVGIFNTGMFEYDSTLAYVSLTQAQTFFDLGDTVTGIQLKVKDVYHT 240
Query: 238 EKTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ I R+LG+ DW Q + ++
Sbjct: 241 GELAREINRVLGSDYFARDWMQMNRNILFALKT 273
>gi|170733468|ref|YP_001765415.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Burkholderia cenocepacia MC0-3]
gi|254247793|ref|ZP_04941114.1| ABC-type transport system, permease component [Burkholderia
cenocepacia PC184]
gi|124872569|gb|EAY64285.1| ABC-type transport system, permease component [Burkholderia
cenocepacia PC184]
gi|169816710|gb|ACA91293.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia cenocepacia MC0-3]
Length = 417
Score = 158 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 75/270 (27%), Positives = 140/270 (51%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY + ++ N FIS + +S +G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MKLPYEWQIGWRYTRAGKRTTGNGFISFIALVSMLGIALGVAALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV + + D+Q A P VI P+V QA ++ + +L
Sbjct: 61 RMLSVLAHVEVFSPTGSMPDWQLTAQEARRNPSVIGAAPYVDAQALLTRQDAVSGVMLRG 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + G + G+++G LA NLG+++GDK+ +++P G +TP
Sbjct: 121 VEPSLEPQVSDIGKDMKAGQLGALVPGQFGIVLGDALAGNLGVTVGDKVTLVAPEGSITP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
GM R K +TV+G+F +YD+ + +++++A+ F + NA +G+ + + D +
Sbjct: 181 AGMMPRLKQFTVVGVFESGHYEYDSTLAMINIRDAEALFRM-NAPTGVRLRLTDMQKAPQ 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L + + DW Q+ + +FS +
Sbjct: 240 VAVELSHTLSGSLYIRDWTQQNKTWFSAVQ 269
>gi|325518160|gb|EGC97938.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Burkholderia sp. TJI49]
Length = 417
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 78/270 (28%), Positives = 141/270 (52%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY + ++ N FIS + +S +G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MKLPYEWQIGWRYTRAGKRTTGNGFISFIALVSMLGIALGVAALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV I + D+Q A P VI P+V QA ++ + +L
Sbjct: 61 RMLSVLAHVEIFSPTGSMPDWQLTAQEARRNPSVIGAAPYVEAQALLTRQDAVSGVMLRG 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + G +S G+++G LA NLG+++GDKI +++P G +TP
Sbjct: 121 VEPSLEPQVSDIGKDMKAGQLSALVPGQFGIVLGDALAGNLGVTVGDKITLVAPEGSITP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
GM R K +TV+G+F +YD+ + + +++A+ F + +A +G+ + +KD +
Sbjct: 181 AGMMPRLKQFTVVGVFESGHYEYDSTLAMIDIRDAEALFRM-SAPTGVRLRLKDMQKAPQ 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L + + DW Q+ + +FS +
Sbjct: 240 VALELSHTLSGSLYIRDWTQQNKTWFSAVQ 269
>gi|238028009|ref|YP_002912240.1| lipoprotein releasing system, transmembrane protein, LolC/E family
protein [Burkholderia glumae BGR1]
gi|237877203|gb|ACR29536.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
protein [Burkholderia glumae BGR1]
Length = 417
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 79/270 (29%), Positives = 140/270 (51%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY + ++ N FIS + +S +G+ +GV ALIVV+SVMNGF+ +
Sbjct: 1 MKLPYEWQIGWRYTRAGKRTTGNGFISFIAAVSMLGIALGVAALIVVLSVMNGFQTQVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV I + D+Q A+ P+VI P+V QA ++ + +L
Sbjct: 61 RMLSVLAHVEIFSPTGSMPDWQRTASEARRNPEVIGSAPYVEAQALLTRQDAVSGVMLRG 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ G+++ G G+++G LA NLG+++GDK+ +++P G +TP
Sbjct: 121 VDPTLEPQVSDVGKDMRAGSLAALQPGGFGIVLGTALASNLGVTVGDKVTLVAPEGTITP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
GM R K +TV+G+F +YD+ + + + +AQ F L A +G+ + +KD +
Sbjct: 181 AGMLPRLKQFTVVGVFESGHYEYDSTLAMIDIHDAQTLFRLP-APTGVRLRLKDMQRAPQ 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L + + DW Q+ + +FS +
Sbjct: 240 VAVELSHSLSGELYIRDWTQQNKTWFSAVK 269
>gi|221198419|ref|ZP_03571465.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia multivorans CGD2M]
gi|221208904|ref|ZP_03581901.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia multivorans CGD2]
gi|221171187|gb|EEE03637.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia multivorans CGD2]
gi|221182351|gb|EEE14752.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia multivorans CGD2M]
Length = 417
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 79/270 (29%), Positives = 141/270 (52%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY + ++ N FIS + +S +G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MKLPYEWQIGWRYTRAGKRTTGNGFISFIALVSMLGIALGVAALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV I + D+Q A P VI P+V QA ++ + +L
Sbjct: 61 RMLSVLAHVEIFSPTGSMPDWQLTAQEARRNPSVIGAAPYVEAQALLTRQDAVSGVMLRG 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + G +S G+++G LA NLG+S+GDKI +++P G +TP
Sbjct: 121 IEPSLEPQVSDIGKDMKAGQLSALVPGQFGIVLGDALAGNLGVSVGDKITLVAPEGSITP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
GM R K +TV+G+F +YD+ + + +++A+ F + +A +G+ + +KD +
Sbjct: 181 AGMMPRLKQFTVVGVFESGHYEYDSTLAMIDIRDAEALFRM-SAPTGVRLRLKDMQKAPQ 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L + + DW Q+ + +FS +
Sbjct: 240 VALELSHTLSGSLYIRDWTQQNKTWFSAVQ 269
>gi|300023434|ref|YP_003756045.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Hyphomicrobium denitrificans ATCC 51888]
gi|299525255|gb|ADJ23724.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Hyphomicrobium denitrificans ATCC 51888]
Length = 423
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 103/265 (38%), Positives = 156/265 (58%), Gaps = 1/265 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE ++A RYL + RK FIS+ + SF+G+M+GV LI+VM+VMNGFR D+ +++G
Sbjct: 11 FSSFEWMIAGRYLRARRKEGFISVIAGFSFLGIMLGVATLIIVMAVMNGFRHDLFSKIMG 70
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGHV++Q+ DY+ +A+++ +P V +P + GQ VS S G LVRG+
Sbjct: 71 LNGHVIVQKLGERFDDYEQMADKIARVPGVQVAMPVIEGQVMVSSSSQAL-GGLVRGVRE 129
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
SD L+ + FD G+ IG LA L + +GD I ++SP G TP G
Sbjct: 130 SDLKALKLVSGNIRAGTLDGFDEQTGIAIGVRLANQLHVGLGDSITLVSPRGAATPFGTA 189
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
RSK Y + +F + +YD M++M L+EAQ YF+ V +EV V DP+ ++K +
Sbjct: 190 PRSKPYQITSIFELGMSEYDRMMIFMPLKEAQKYFSKGGEVDVVEVIVNDPENVDKFRTD 249
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCY 268
I++ G + V DW+QR + FF+
Sbjct: 250 ILQAGGPSIAVADWRQRNETFFNVL 274
>gi|161524331|ref|YP_001579343.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Burkholderia multivorans ATCC 17616]
gi|189350913|ref|YP_001946541.1| ABC-type transporter permease [Burkholderia multivorans ATCC 17616]
gi|221214765|ref|ZP_03587734.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia multivorans CGD1]
gi|160341760|gb|ABX14846.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia multivorans ATCC 17616]
gi|189334935|dbj|BAG44005.1| ABC-type transport system permease component [Burkholderia
multivorans ATCC 17616]
gi|221165304|gb|EED97781.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia multivorans CGD1]
Length = 417
Score = 157 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 78/270 (28%), Positives = 141/270 (52%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY + ++ N FIS + +S +G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MKLPYEWQIGWRYTRAGKRTTGNGFISFIALVSMLGIALGVAALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV I + D+Q A P VI P+V QA ++ + +L
Sbjct: 61 RMLSVLAHVEIFSPTGSMPDWQLTAQEARRNPSVIGAAPYVEAQALLTRQDAVSGVMLRG 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + G +S G+++G LA NLG+++GDKI +++P G +TP
Sbjct: 121 IEPSLEPQVSDIGKDMKAGQLSALVPGQFGIVLGDALAGNLGVTVGDKITLVAPEGSITP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
GM R K +TV+G+F +YD+ + + +++A+ F + +A +G+ + +KD +
Sbjct: 181 AGMMPRLKQFTVVGVFESGHYEYDSTLAMIDIRDAEALFRM-SAPTGVRLRLKDMQKAPQ 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L + + DW Q+ + +FS +
Sbjct: 240 VALELSHTLSGSLYIRDWTQQNKTWFSAVQ 269
>gi|300691903|ref|YP_003752898.1| outer membrane-specific lipoprotein transporter subunit ; membrane
component of ABC superfamily [Ralstonia solanacearum
PSI07]
gi|299078963|emb|CBJ51623.1| outer membrane-specific lipoprotein transporter subunit ; membrane
component of ABC superfamily [Ralstonia solanacearum
PSI07]
Length = 416
Score = 157 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 74/271 (27%), Positives = 142/271 (52%), Gaps = 5/271 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY ++++ N+FIS S IS +G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MKFPYEWQIGWRYTRASKRASRNSFISFISLISMLGIALGVAALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + H+ I L D+Q AN +V+ P+V QA ++ + +L
Sbjct: 61 RMLSVLSHIEIMAPA-SLPDWQRTANEAMQNKEVVGAAPYVGAQAMITRDEAVRGVLLRG 119
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + G++ + G+++G +LAR LG+ GDK+ +++P G +TP
Sbjct: 120 VSPADEPKVSDIAKDFKSGSIDDLKPGEFGIVLGSELARGLGVRQGDKVTLVAPQGTITP 179
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
G+ R K +TV G F ++D+ + + + +A+ F L+ +G+ + + D +
Sbjct: 180 AGVLPRMKQFTVTGTFESGHYEFDSSLALIHIDDAERLFRLDGP-TGVRLKLVDMQRAPQ 238
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYES 270
E + R L + + DW ++ + +F+ ++
Sbjct: 239 VAEALSRTLTGELYIRDWSRQNKNWFAAVQT 269
>gi|325983512|ref|YP_004295914.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Nitrosomonas sp. AL212]
gi|325533031|gb|ADZ27752.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Nitrosomonas sp. AL212]
Length = 415
Score = 157 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 85/267 (31%), Positives = 145/267 (54%), Gaps = 1/267 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
S +E+ + RY + ++N FIS S IS +G+ +G+ ALI VMSVMNGF++++ R+LG
Sbjct: 1 MSPYELFIGLRYTRAKKRNHFISFISLISLMGITLGMTALITVMSVMNGFQKEVRTRILG 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ HV I + L +Q A P V P+VS Q +S ++ +
Sbjct: 61 VASHVQIGSFHGNLSHWQQTAEEAIKHPAVEAAAPYVSAQGMLSHNQVVQGVLVRGILPE 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ S + G++++ G++IG +LAR +G IGDKI ++SP G VTP G+
Sbjct: 121 MEDQVADFSKTMVSGDLNHLIPGEFGIVIGMELARAMGTFIGDKIVLISPQGQVTPAGIL 180
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN-AVSGIEVFVKDPDAIEKTHE 242
R K +TV+G+F + +YD+G++ + + +AQ + +EN VSGI + +KD K +
Sbjct: 181 PRLKQFTVVGIFEVGHFEYDSGLILIHMFDAQKLYRMENDDVSGIRLKLKDLFQAPKVVQ 240
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ +L + DW +++ +F +
Sbjct: 241 ELPAMLTIDSHISDWTRQHANYFRAIQ 267
>gi|120554667|ref|YP_959018.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Marinobacter aquaeolei VT8]
gi|120324516|gb|ABM18831.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Marinobacter aquaeolei VT8]
Length = 414
Score = 157 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 78/266 (29%), Positives = 128/266 (48%), Gaps = 1/266 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RY + R+N FIS S S IG+M+GV LI+V+SVMNGF ++ +R+L
Sbjct: 1 MFRPLSFYIGLRYTAAKRRNHFISFISLTSMIGLMLGVAVLIIVLSVMNGFDRELKQRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H IQ PL ++Q I +++ P V+ PF+ GQ V+G + +L +
Sbjct: 61 GMVPHATIQGASGPLENWQEIDQKVEAYPRVLAAAPFIQGQGMVTGGGNVRGVMLNGVLP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S G++ G+IIG+ +A +L + +GDK+ ++ P VTP G+
Sbjct: 121 EQEASVSIIENHFIEGSLDELRSGEFGIIIGRLMANSLRLGVGDKLTVVLPEASVTPAGV 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV G+F + D + + +A GI + + D A +
Sbjct: 181 LPRLKRFTVKGIF-SVGAELDGNYALIHMDDAARLMRTGGRAEGIRLLMDDLFAAPRVVN 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCY 268
++ R LG V DW + + F
Sbjct: 240 DVARTLGGRYYVSDWTRTHGNLFQAI 265
>gi|78066889|ref|YP_369658.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Burkholderia sp. 383]
gi|77967634|gb|ABB09014.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia sp. 383]
Length = 417
Score = 157 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 75/270 (27%), Positives = 139/270 (51%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY + ++ N FIS + +S +G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MKLPYEWQIGWRYTRAGKRTTGNGFISFIALVSMLGIALGVAALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV + + D+Q A P VI P+V QA ++ + +L
Sbjct: 61 RMLSVLAHVEVFSPTGSMPDWQLTAQEARRNPSVIGAAPYVDAQALLTRQDAVSGVMLRG 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ G + G+++G LA NLG+++GDK+ +++P G +TP
Sbjct: 121 VEPTLEPQVSDIGKDMKAGQLGALVPGQFGIVLGDALAGNLGVTVGDKVTLVAPEGSITP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
GM R K +TV+G+F +YD+ + +++++A+ F + +A +G+ + +KD
Sbjct: 181 AGMMPRLKQFTVVGVFESGHYEYDSTLAMINIRDAEALFRM-SAPTGVRLRLKDMQKAPD 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L + + DW Q+ + +FS +
Sbjct: 240 VAVELSHTLSGSLYIRDWTQQNKTWFSAVQ 269
>gi|298529245|ref|ZP_07016648.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Desulfonatronospira thiodismutans ASO3-1]
gi|298510681|gb|EFI34584.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Desulfonatronospira thiodismutans ASO3-1]
Length = 409
Score = 157 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 88/269 (32%), Positives = 136/269 (50%), Gaps = 4/269 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
RFE +VA RYL + R+ AFIS+ S +S +GV +GV ALI+V+ VMNGF E++ ++LG+
Sbjct: 1 MRFEFLVALRYLRAKREQAFISVISLLSVLGVALGVAALIIVLGVMNGFSENLRDKILGL 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N H+V+ + DYQ +A L+ I V PF+ + +S S VL
Sbjct: 61 NAHIVVGSHTGTIADYQDMAGDLEEIAGVRGATPFIYSEVMLSTPSGVKGVVLRGIDPQG 120
Query: 125 DFSYLQNSFSRFYGNVSNDFD--RGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
L G V + G+IIG++LA NL GD +N+++P G+ T G
Sbjct: 121 AKQVLGLDQEMVQGGVLDLEIEKDFPGLIIGQELAANLRAGTGDTVNVMAPSGEGTSAGF 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
++ V G+FR +YD Y ++ +AQ + VSG+E+ V D D +
Sbjct: 181 TPSITTFDVRGVFRTGMYEYDTSFAYTTINDAQELMGFTRDVVSGMELRVHDADRARELS 240
Query: 242 ENIVRIL-GNGVVVIDWQQRYQIFFSCYE 269
E + L G V +W++ + F+ E
Sbjct: 241 ERVSEKLGGYPYYVRNWKEMNENLFAALE 269
>gi|172061069|ref|YP_001808721.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Burkholderia ambifaria MC40-6]
gi|171993586|gb|ACB64505.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia ambifaria MC40-6]
Length = 417
Score = 157 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 74/270 (27%), Positives = 140/270 (51%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY + ++ N FIS + +S +G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MKLPYEWQIGWRYTRAGKRTTGNGFISFIALVSMLGIALGVAALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV + + D+Q A P V P+V QA ++ + +L
Sbjct: 61 RMLSVLAHVEVFSPTGSMPDWQLTAQEARRNPSVTGAAPYVDAQALLTRQDAVSGVMLRG 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + G ++ G+++G LA NLG+++GDKI +++P G +TP
Sbjct: 121 VEPSLEPQVSDIGKDMKAGQLTALVPGQFGIVLGDALAGNLGVTVGDKITLVAPEGTITP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
GM R K +TV+G+F +YD+ + +++++A+ F + +A +G+ + + D +
Sbjct: 181 AGMMPRLKQFTVVGVFESGHYEYDSTLAMVNIRDAEALFRM-SAPTGVRLRLTDMQKAPQ 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L + + DW Q+ + +FS +
Sbjct: 240 VAVELSHTLSGSLYIRDWTQQNKTWFSAVQ 269
>gi|297569277|ref|YP_003690621.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Desulfurivibrio alkaliphilus AHT2]
gi|296925192|gb|ADH86002.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Desulfurivibrio alkaliphilus AHT2]
Length = 409
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 91/269 (33%), Positives = 142/269 (52%), Gaps = 5/269 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F ++ RYL + R+ FIS+ S IS GVM+GV ALIVV++VM GF + ++LGI
Sbjct: 1 MNFAWFISRRYLQAKRRKGFISLISLISVAGVMVGVAALIVVLAVMTGFTAEFRDKILGI 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N H+++QQ Y + +Y A R+ IP V V P++ GQA ++G G ++ +
Sbjct: 61 NSHIIVQQPGYEIDNYHEPARRIAAIPGVAGVTPYIYGQAMITGGVGGTGAIVRGIDPET 120
Query: 125 DFSYLQNSFSRFYG-----NVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
LQ G + GVI+GKDLARNLG+ + D++ ++S G +TP
Sbjct: 121 VNRVLQLEDYLEAGELAGLAAPANRRAAPGVILGKDLARNLGVGLDDRVKLISAAGPLTP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
MG+ + ++ V G+F +YD+ + Y+SL A+ + +L + V G+EV V D + ++
Sbjct: 181 MGVIPQITTFRVAGLFASGMYEYDSSLAYLSLDTAREFMDLGDRVHGLEVRVDDINRADR 240
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCY 268
I LG DW + FS
Sbjct: 241 IARAINDELGPSYHARDWMNMNRQIFSAL 269
>gi|15965040|ref|NP_385393.1| hypothetical protein SMc01935 [Sinorhizobium meliloti 1021]
gi|15074219|emb|CAC45866.1| ABC transport system, permease [Sinorhizobium meliloti 1021]
Length = 408
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 115/260 (44%), Positives = 159/260 (61%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+VAWRYL S RK AFIS+ + SFIG+M+GV LI+VM+VMNGFR ++I R+LG+NGH++
Sbjct: 1 MVAWRYLRSRRKEAFISVIAGFSFIGIMLGVGTLIIVMAVMNGFRTELISRILGMNGHMI 60
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+Q PL +Y +A R +P V +P V GQ GL +G LVRGI D + L
Sbjct: 61 VQPLDGPLTNYADLATRFSAVPGVTMAIPIVEGQVLAQGLGDASTGALVRGIRADDLTKL 120
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
++ F G GV IG +A LGI +G I + SP GDVTPMGM R K+Y
Sbjct: 121 KSISEHIQSGDLVGFASGSGVAIGSRMAEQLGIRVGGTITLTSPNGDVTPMGMNPRVKAY 180
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
TV +F M +YD +++M L+EAQLYFN E V IE+F + PDA+++ + + G
Sbjct: 181 TVSAIFEMGMSEYDATIIFMPLEEAQLYFNAEGLVQSIEIFAEHPDAVDELRKPVEDAAG 240
Query: 250 NGVVVIDWQQRYQIFFSCYE 269
+ + DW++R + FFS E
Sbjct: 241 RQIFITDWRERNRTFFSALE 260
>gi|253998345|ref|YP_003050408.1| LolC/E family lipoprotein releasing system transmembrane protein
[Methylovorus sp. SIP3-4]
gi|253985024|gb|ACT49881.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Methylovorus sp. SIP3-4]
Length = 422
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 77/266 (28%), Positives = 141/266 (53%), Gaps = 2/266 (0%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
+E+ V RY + R+N FIS S S IG+ +GV ALI+V+SVMNGF+E++ R+LG+
Sbjct: 9 PYEIFVGLRYTRAKRRNHFISFISMTSMIGIGLGVAALIIVLSVMNGFQEELRSRILGVA 68
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
H+ I L D+ +A ++ P V V P++ Q +S S ++ + +
Sbjct: 69 SHMQISGVDNKLADWPILAKEVEHAPHVQAVAPYIMAQGMLSYGQSVQGAIVRGVLPVDE 128
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
G +++ + G+++G +LA++LG+ +GDK+ +L+P G TP G+ R
Sbjct: 129 DRVADLGRHMRAGKLTDLKEGEFGIVLGAELAQSLGVILGDKVVVLAPQGQFTPTGIVPR 188
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
K + V+G+F++ +YD G+ + + +A + + + VSG+ + + D A + +V
Sbjct: 189 IKQFRVVGIFQIGMYEYDAGLALIHMADAAKLYRMGSDVSGVRLKLDDLFAAPRVTTALV 248
Query: 246 RIL--GNGVVVIDWQQRYQIFFSCYE 269
L + DW +++ FF +
Sbjct: 249 AQLQGKGNYYISDWTEQHANFFRAVQ 274
>gi|170703292|ref|ZP_02894087.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia ambifaria IOP40-10]
gi|170131802|gb|EDT00335.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia ambifaria IOP40-10]
Length = 417
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 73/270 (27%), Positives = 139/270 (51%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY + ++ N FIS + +S +G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MKLPYEWQIGWRYTRAGKRTTGNGFISFIALVSMLGIALGVAALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV + + ++Q A P V P+V QA ++ + +L
Sbjct: 61 RMLSVLAHVEVFSPTGSMPNWQLTAQEARRNPLVTGAAPYVDAQALLTRQDAVSGVMLRG 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + G ++ G+++G LA NLG+++GDKI +++P G +TP
Sbjct: 121 IEPSLEPQVSDIGKDMKAGQLTALVPGQFGIVLGDALAGNLGVTVGDKITLVAPEGTITP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
GM R K +TV+G+F +YD+ + + +++A+ F + +A +G+ + + D +
Sbjct: 181 AGMMPRLKQFTVVGVFESGHYEYDSTLAMVDIRDAEALFRM-SAPTGVRLRLTDMQKAPQ 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L + + DW Q+ + +FS +
Sbjct: 240 VAVELSHTLSGSLYIRDWTQQNKTWFSAVQ 269
>gi|163850498|ref|YP_001638541.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Methylobacterium extorquens PA1]
gi|163662103|gb|ABY29470.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Methylobacterium extorquens PA1]
Length = 439
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 101/266 (37%), Positives = 154/266 (57%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE I+A RYL + R+ +S+ + S +G+ +GV LI+V+SVMNGFR ++ +++G
Sbjct: 31 FAGFEWIIAGRYLRARRRGGGVSVVALFSVLGIAVGVATLIIVLSVMNGFRSELRSKIIG 90
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGHV DY +++RL+ + V V+P V GQAF S GGSGVLVRG+
Sbjct: 91 LNGHVFAAPIDRLFTDYVDLSDRLEKVAGVRAVVPMVQGQAFASSPY-GGSGVLVRGVRE 149
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
SD + G +FD G+GV +GK LA LG+ GD++ + +P G TP G
Sbjct: 150 SDLPKIPAVSGAIKGGTLENFDDGQGVALGKRLADALGLQAGDQVTLSTPKGASTPFGTA 209
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R+K+Y V +F + D+D M +M L EAQ +FN + VS IE+++ + DA+ + E
Sbjct: 210 PRTKTYAVKAIFEIGVTDFDTTMAFMPLAEAQAFFNRDGDVSVIEIYLDNADAVGEMREP 269
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ V++ DW+Q + FF E
Sbjct: 270 LEMAAERPVLLTDWRQTNRTFFGALE 295
>gi|254251977|ref|ZP_04945295.1| ABC-type transport system permease component [Burkholderia dolosa
AUO158]
gi|124894586|gb|EAY68466.1| ABC-type transport system permease component [Burkholderia dolosa
AUO158]
Length = 417
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 76/270 (28%), Positives = 140/270 (51%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY + ++ N FIS + +S +G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MKLPYEWQIGWRYTRAGKRTTGNGFISFIALVSMLGIALGVAALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV + + D+Q A P VI P+V QA ++ + +L
Sbjct: 61 RMLSVLAHVEVFSPTGSMPDWQLTAQEARRNPSVIGAAPYVEAQALLTRQDAVSGVMLRG 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + G ++ G+++G LA NLG+++GDKI +++P G +TP
Sbjct: 121 IEPSLEPQVSDIGKDMKAGKLAALVPGQFGIVLGDALAGNLGVTVGDKIMLVAPEGTITP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
GM R K +TV+G+F +YD+ + +++++A+ F L A +G+ + + D +
Sbjct: 181 AGMMPRLKQFTVVGVFESGHYEYDSTLAMINIRDAEALFRLP-APTGVRLRLTDMQKAPQ 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L + + DW Q+ + +FS +
Sbjct: 240 VALELSHTLSGSLYIRDWTQQNKTWFSAVQ 269
>gi|323139096|ref|ZP_08074154.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Methylocystis sp. ATCC 49242]
gi|322395660|gb|EFX98203.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Methylocystis sp. ATCC 49242]
Length = 430
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 102/266 (38%), Positives = 154/266 (57%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE +VA RYL + R + F+S+ + SF+G+M+GV LIVV SVMNGF +++ +++G
Sbjct: 18 FSAFEWMVALRYLRARRADGFVSVIAGFSFLGIMLGVATLIVVTSVMNGFHRELMDKIMG 77
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
INGH +Q P D+ +A + + +P V +P V G A G SGVLVRG+
Sbjct: 78 INGHAFLQAVETPFTDWDDVAGKTEKVPGVKLAIPMVEG-AAGISTQFGQSGVLVRGVRE 136
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D L FD G+ V IG+ LA NLG+++GDK+++L G TP G+
Sbjct: 137 KDIMRLPGVTGNVKDGSFKGFDAGESVAIGQRLAENLGVAVGDKVSLLIAKGAQTPFGVA 196
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K+Y V +F + ++DN VYM L EAQ +FN +N + +E FV DP+ ++ N
Sbjct: 197 PRIKAYKVAAIFSIGMSEFDNVFVYMPLAEAQAFFNKDNEATVVEAFVDDPEQMDAFRAN 256
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + ++V DW+QR + FF +
Sbjct: 257 LEKAVTRPIIVTDWRQRNKTFFDTLQ 282
>gi|197117229|ref|YP_002137656.1| lipoprotein release ABC transporter membrane protein [Geobacter
bemidjiensis Bem]
gi|197086589|gb|ACH37860.1| lipoprotein release ABC transporter, membrane protein [Geobacter
bemidjiensis Bem]
Length = 416
Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 84/270 (31%), Positives = 153/270 (56%), Gaps = 5/270 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
FE+ + RYL + RK+ FIS+ + IS GV +GVMALI+V++VM GF E + +++LG
Sbjct: 1 MPFELFIGLRYLKAKRKSTFISLITLISVAGVALGVMALIIVLAVMTGFEEQLKEKILGT 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N H+V+ + DY + +L+ + V+ PF+ Q +S SGV++RGI
Sbjct: 61 NAHIVVLSSLGAVHDYPQVIKKLEGMDGVVAATPFIYNQVMLSTG-KNVSGVVLRGIDVK 119
Query: 125 DFSYLQNSFSRFYGNV----SNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + N ++ + G+++GK+LA+NLG+ +GD ++++SP G++TP+
Sbjct: 120 SDAKVTNLQKSMVEGKLDTLESEVGKTPGLVVGKELAKNLGLFLGDTVDVISPMGNITPL 179
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
GM + + + G+F +YD+ + Y+SL+EAQ + +L + V+G+++ V+D ++
Sbjct: 180 GMMPKLNRFRITGIFNTGMFEYDSTLAYVSLKEAQQFLDLGDVVTGVQLKVRDVYKSDQL 239
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ I + LG DW Q + ++
Sbjct: 240 AQKINQELGPPYHARDWMQMNKNILFALKT 269
>gi|134296295|ref|YP_001120030.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Burkholderia vietnamiensis G4]
gi|134139452|gb|ABO55195.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia vietnamiensis G4]
Length = 417
Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 74/270 (27%), Positives = 139/270 (51%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY + ++ N FIS + +S +G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MKLPYEWQIGWRYTRAGKRTTGNGFISFIALVSMLGIALGVAALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV + + D+Q A P VI P+V QA ++ + +L
Sbjct: 61 RMLSVLAHVEVFSPTGSMPDWQLTAQEARRNPSVIGAAPYVDAQALLTRQDAVSGVMLRG 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + G + G+++G LA NLG+++GDK+ +++P G +TP
Sbjct: 121 VEPSLEPQVSDIGKDMKAGRLDALVPGQFGIVLGDALAGNLGVTVGDKVTLVAPEGTITP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
GM R K +TV+G+F +YD+ + + +++A+ F + +A +G+ + + D +
Sbjct: 181 AGMMPRLKQFTVVGVFESGHYEYDSTLAMIDIRDAEALFRM-SAPTGVRLRLSDMQKAPQ 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L + + DW Q+ + +FS +
Sbjct: 240 VAIELSHTLSGSLYIRDWTQQNKTWFSAVQ 269
>gi|74317779|ref|YP_315519.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Thiobacillus denitrificans ATCC 25259]
gi|74057274|gb|AAZ97714.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Thiobacillus denitrificans ATCC 25259]
Length = 414
Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 80/265 (30%), Positives = 136/265 (51%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
E++V RY + R+N FIS S +S G+ +GVMALIVV+SVMNGF+E++ R+LG
Sbjct: 1 MLPLELLVGLRYTHAKRRNHFISFISVVSMGGIALGVMALIVVLSVMNGFQEELRARILG 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ H+ I L D++ + + DV+ P+V+ Q ++ ++ +
Sbjct: 61 VAAHLEISGPGDRLADWRSVLAQAQRNKDVVSGAPYVNAQGMLANGDMVRGAIIRGIVPG 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + S G +++ G+I+G +LAR L + GDK+ +L+P G++TP G+
Sbjct: 121 MENAVADFSRHMKAGRLTDLKPGEFGIILGGELARALNVFPGDKLVLLTPQGNITPAGVM 180
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K +TV G+F +YD+G+ + LQ+AQ L VSG+ + + +
Sbjct: 181 PRVKQFTVTGIFEAGMFEYDSGLALIHLQDAQKLLRLGQDVSGVRLKLDELFRAPFVTRE 240
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCY 268
+ + L + DW Q + FF
Sbjct: 241 LAQTLTGDYYLTDWTQSHANFFRAV 265
>gi|107028706|ref|YP_625801.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Burkholderia cenocepacia AU 1054]
gi|116690135|ref|YP_835758.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Burkholderia cenocepacia HI2424]
gi|206560548|ref|YP_002231313.1| putative lipoprotein releasing system transmembrane protein
[Burkholderia cenocepacia J2315]
gi|105897870|gb|ABF80828.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia cenocepacia AU 1054]
gi|116648224|gb|ABK08865.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia cenocepacia HI2424]
gi|198036590|emb|CAR52487.1| putative lipoprotein releasing system transmembrane protein
[Burkholderia cenocepacia J2315]
Length = 417
Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 74/270 (27%), Positives = 140/270 (51%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY + ++ N FIS + +S +G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MKLPYEWQIGWRYTRAGKRTTGNGFISFIALVSMLGIALGVAALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV + + D+Q A P VI P+V QA ++ + +L
Sbjct: 61 RMLSVLAHVEVFSPTGSMPDWQLTAQEARRNPSVIGAAPYVDAQALLTRQDAVSGVMLRG 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + G + G+++G LA NLG+++GDK+ +++P G +TP
Sbjct: 121 VEPSLEPQVSDIGKDMKAGQLGALVPGQFGIVLGDALAGNLGVTVGDKVTLVAPEGSITP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
GM R K +TV+G+F +YD+ + +++++A+ F + +A +G+ + + D +
Sbjct: 181 AGMMPRLKQFTVVGVFESGHYEYDSTLAMINIRDAEALFRM-SAPTGVRLRLTDMQKAPQ 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L + + DW Q+ + +FS +
Sbjct: 240 VAVELSHTLSGSLYIRDWTQQNKTWFSAVQ 269
>gi|115352202|ref|YP_774041.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Burkholderia ambifaria AMMD]
gi|115282190|gb|ABI87707.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia ambifaria AMMD]
Length = 417
Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 73/270 (27%), Positives = 140/270 (51%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY + ++ N FIS + +S +G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MKLPYEWQIGWRYTRAGKRTTGNGFISFIALVSMLGIALGVAALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV + + ++Q A P V P+V QA ++ + +L
Sbjct: 61 RMLSVLAHVEVFSPTGSMPNWQLTAQEARRNPSVTGAAPYVDAQALLTRQDAVSGVMLRG 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + G ++ G+++G LA NLG+++GDKI +++P G +TP
Sbjct: 121 IEPSLEPQVSDIGKDMKAGQLTALVPGQFGIVLGDALAGNLGVTVGDKITLVAPEGTITP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
GM R K +TV+G+F +YD+ + +++++A+ F + +A +G+ + + D +
Sbjct: 181 AGMMPRLKQFTVVGVFESGHYEYDSTLAMVNIRDAEALFRM-SAPTGVRLRLTDMQKAPQ 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L + + DW Q+ + +FS +
Sbjct: 240 VAVELSHTLSGSLYIRDWTQQNKTWFSAVQ 269
>gi|171321903|ref|ZP_02910796.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia ambifaria MEX-5]
gi|171092800|gb|EDT38070.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia ambifaria MEX-5]
Length = 417
Score = 156 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 73/270 (27%), Positives = 140/270 (51%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY + ++ N FIS + +S +G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MKLPYEWQIGWRYTRAGKRTTGNGFISFIALVSMLGIALGVAALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV + + ++Q A P V P+V QA ++ + +L
Sbjct: 61 RMLSVLAHVEVFSPTGSMPNWQLTAQEARRNPSVTGAAPYVDAQALLTRQDAVSGVMLRG 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + G ++ G+++G LA NLG+++GDKI +++P G +TP
Sbjct: 121 IEPSLEPQVSDIGKDMKAGQLAALVPGQFGIVLGDALAGNLGVTVGDKITLVAPEGTITP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
GM R K +TV+G+F +YD+ + +++++A+ F + +A +G+ + + D +
Sbjct: 181 AGMMPRLKQFTVVGVFESGHYEYDSTLAMVNIRDAEALFRM-SAPTGVRLRLTDMQKAPQ 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L + + DW Q+ + +FS +
Sbjct: 240 VAIELSHTLSGSLYIRDWTQQNKTWFSAVQ 269
>gi|237746043|ref|ZP_04576523.1| outer membrane lipoproteins ABC transporter membrane protein
[Oxalobacter formigenes HOxBLS]
gi|229377394|gb|EEO27485.1| outer membrane lipoproteins ABC transporter membrane protein
[Oxalobacter formigenes HOxBLS]
Length = 422
Score = 156 bits (392), Expect = 4e-36, Method: Composition-based stats.
Identities = 87/276 (31%), Positives = 148/276 (53%), Gaps = 7/276 (2%)
Query: 1 MSIFS--RFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFRE 55
M IFS FE +V RYL S ++ N FIS S IS G+ +GV ALI+VMSVMNGF++
Sbjct: 1 MKIFSNLPFEWLVGLRYLRSGKRSGRNRFISFISLISMTGIALGVAALIIVMSVMNGFQK 60
Query: 56 DMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSG 115
++ R+L + H+ +Q Y L D++ A P+V P+V GQA V+ +
Sbjct: 61 EVRDRMLSVLPHIEVQDIYGSLPDWRKTAETARQNPEVTGTAPYVIGQALVTRNDTMRGV 120
Query: 116 VLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYG 175
++ + + + + G + + + IGK+LAR L I GDK+ ++ P G
Sbjct: 121 IVRGIEPKEEPNVSEIARQFIAGKLGDLQPDSFNIAIGKELARMLRIGPGDKLTVVIPQG 180
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD 235
VTP G+ R K +TV G+F ++D+ + ++++++A F NA +G+ + +KD
Sbjct: 181 QVTPAGVLPRLKQFTVSGIFEAGHFEFDSTLAFVNMEDAMRMFRT-NAPTGLRIQIKDMQ 239
Query: 236 AIEKTHENIVRILG-NGVVVIDWQQRYQIFFSCYES 270
+ I +L + V+V DW ++ + +F+ ++
Sbjct: 240 EAPQVAHEIGLLLSDDDVIVRDWSKQNRNWFAAVQT 275
>gi|313200419|ref|YP_004039077.1| LolC/E family lipoprotein releasing system transmembrane protein
[Methylovorus sp. MP688]
gi|312439735|gb|ADQ83841.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Methylovorus sp. MP688]
Length = 422
Score = 156 bits (392), Expect = 4e-36, Method: Composition-based stats.
Identities = 77/266 (28%), Positives = 141/266 (53%), Gaps = 2/266 (0%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
+E+ V RY + R+N FIS S S IG+ +GV ALI+V+SVMNGF+E++ R+LG+
Sbjct: 9 PYEIFVGLRYTRAKRRNHFISFISMTSMIGIGLGVAALIIVLSVMNGFQEELRSRILGVA 68
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
H+ I L D+ +A ++ P V V P++ Q +S S ++ + +
Sbjct: 69 SHMQISGVDNKLADWPILAKEVEHAPHVQAVAPYIMAQGMLSYGQSVQGAIVRGVLPVDE 128
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
G +++ + G+++G +LA++LG+ +GDK+ +L+P G TP G+ R
Sbjct: 129 DRVADLGRHMRAGKLTDLKEGEFGIVLGAELAQSLGVILGDKVVVLAPQGQFTPTGIVPR 188
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
K + V+G+F++ +YD G+ + + +A + + + VSG+ + + D A + +V
Sbjct: 189 IKQFRVVGIFQIGMYEYDAGLALIHMADAAKLYRMGSDVSGVRLKLDDLFAAPRVTTALV 248
Query: 246 RIL--GNGVVVIDWQQRYQIFFSCYE 269
L + DW +++ FF +
Sbjct: 249 AQLQGKGNYYISDWTEQHANFFRAVQ 274
>gi|297537850|ref|YP_003673619.1| LolC/E family lipoprotein releasing system transmembrane protein
[Methylotenera sp. 301]
gi|297257197|gb|ADI29042.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Methylotenera sp. 301]
Length = 431
Score = 156 bits (392), Expect = 4e-36, Method: Composition-based stats.
Identities = 87/272 (31%), Positives = 140/272 (51%), Gaps = 6/272 (2%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE+ V RY + RKN FIS S S IG+ +GV ALI+V+SVMNGF++D+ R+LG
Sbjct: 12 FSVFELFVGMRYTRAKRKNHFISFISLTSMIGIALGVAALIIVLSVMNGFQKDLRTRILG 71
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ H+ I L D+ IA V+ P+++ QA +S ++ I
Sbjct: 72 VASHLEITGSNNTLSDWPNIAESSVKREHVLASAPYITAQAMLSYGQGVQGAIIRGVIPA 131
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
++ S G++++ G+I+G DLA NLG +GDK+ +++P G TP G+
Sbjct: 132 AEDKVADLGKSMRVGSLNDLRAGEFGIILGTDLAYNLGAQMGDKVVVMAPQGQFTPAGVV 191
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K +TV+G+F +YD G+ + + +A + ++N VSG+ + + D +
Sbjct: 192 PRLKQFTVIGLFSSGMQEYDAGLALIHMDDAAKLYRMDNKVSGVRLKLDDLFIAPNVAAS 251
Query: 244 IVRILGNG------VVVIDWQQRYQIFFSCYE 269
I + L V DW Q++ FF +
Sbjct: 252 ISKDLNQPSNPTGAYYVTDWTQQHSNFFKAVQ 283
>gi|320353043|ref|YP_004194382.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Desulfobulbus propionicus DSM 2032]
gi|320121545|gb|ADW17091.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Desulfobulbus propionicus DSM 2032]
Length = 408
Score = 156 bits (392), Expect = 4e-36, Method: Composition-based stats.
Identities = 85/268 (31%), Positives = 149/268 (55%), Gaps = 2/268 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ FE V+ RYL + RK FIS+ + IS +GV +GV+ALIVV+SV GF E + +++G
Sbjct: 1 MAAFEWFVSLRYLRAKRKQKFISLITVISILGVAVGVLALIVVLSVWTGFTEGLRDQIIG 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+N H ++Q+ P+ D + + R+ + V PF++GQA +S S L +
Sbjct: 61 VNAHALVQRFGGPIADTEEVTARIQAVEGVAATTPFINGQALISSSSQSTGVFLRGIDAA 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDR--GKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
S L G +++ +++G+D+AR L + +GD++ ++SP G ++PMG
Sbjct: 121 SALRVLSIGQKMQAGALTDLDQPLEVPAIVLGRDMARQLQVGVGDRVRLMSPNGPLSPMG 180
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ + ++ V+G+F +YD+ + Y+SL A+ +L V GIE+ V D D ++T
Sbjct: 181 VLPKIRTCLVVGIFHTGMSEYDSTIGYISLDTARSLTDLRQGVHGIEIRVADIDQADRTA 240
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + LG+G V DW + Q F+ +
Sbjct: 241 QAVQQALGSGYSVRDWMRLNQNMFAALK 268
>gi|326318409|ref|YP_004236081.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Acidovorax avenae subsp. avenae ATCC 19860]
gi|323375245|gb|ADX47514.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Acidovorax avenae subsp. avenae ATCC 19860]
Length = 417
Score = 156 bits (392), Expect = 4e-36, Method: Composition-based stats.
Identities = 75/270 (27%), Positives = 133/270 (49%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNR---KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E+ + WRY + R +N FIS S +S +G+ +GV ALI+V+SVMNGF++++
Sbjct: 1 MQLPYELALGWRYTRAGRATRRNGFISFISGVSMLGIALGVAALIIVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV I + + + G + G LVR
Sbjct: 61 RMLSVVSHVEIFAPQGAALPDPALTMAEARKNPEVVGAAPFVGSQALIARGEDMKGALVR 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
GI + + + ++ V V++G +LAR LG+ +GD + +++P G VTP
Sbjct: 121 GIDPAREGEVTDLAAKNADAVQTLTPGSFHVVLGVELARALGVRVGDPVTLIAPGGQVTP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
G+ R K TV G+F +YD+ +V M +A+ F LE +GI + ++D +
Sbjct: 181 AGVVPRLKQMTVSGLFESGHYEYDSALVLMHHADAERIFRLEGP-TGIRLKLRDLHQAPE 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + R L +++ DW Q+ + +F+ +
Sbjct: 240 VTQELARSLSGDLLIRDWTQQNRTWFAAVQ 269
>gi|322418265|ref|YP_004197488.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Geobacter sp. M18]
gi|320124652|gb|ADW12212.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Geobacter sp. M18]
Length = 416
Score = 156 bits (392), Expect = 4e-36, Method: Composition-based stats.
Identities = 88/270 (32%), Positives = 150/270 (55%), Gaps = 5/270 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
FE+ + RYL + RK+ FIS+ + IS GV +GVMALI+V++VM GF ED+ ++LG
Sbjct: 1 MPFELFIGLRYLKAKRKSTFISLITLISVAGVALGVMALIIVLAVMTGFEEDLKDKILGT 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N H+V+ + DY + +L+ V+ PF+ Q +S SGV++RGI +
Sbjct: 61 NAHIVVLSGVGAVQDYPQVIRKLEGTDGVVAATPFIYNQVMLSTG-KNVSGVVLRGIEVA 119
Query: 125 DFSYLQNSFSRFYGNV----SNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + N + + GV+IGK+LA+NLG+ +GD ++++SP G++TP+
Sbjct: 120 TDAKVTNLHKSMVEGNLTSLEAEVGKTPGVVIGKELAKNLGLFLGDTVDVISPMGNITPL 179
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
GM + + + G+F +YD+ + Y+SL+EAQ + L + V+G+++ V+D +
Sbjct: 180 GMMPKLNRFRITGIFNTGMFEYDSTLAYVSLKEAQQFLGLGDVVTGVQLKVRDVYKTGEL 239
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ I R LG DW Q + ++
Sbjct: 240 AQVINRELGPPYHARDWMQMNKNILFALKT 269
>gi|239814217|ref|YP_002943127.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Variovorax paradoxus S110]
gi|239800794|gb|ACS17861.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Variovorax paradoxus S110]
Length = 418
Score = 156 bits (392), Expect = 4e-36, Method: Composition-based stats.
Identities = 74/271 (27%), Positives = 142/271 (52%), Gaps = 5/271 (1%)
Query: 3 IFSRFEVIVAWRYLFSNR---KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E+ + WRY + R +N FIS S +S +G+ +GV ALI+V+SVMNGF++++
Sbjct: 1 MRLPYELKLGWRYTRAGRATRRNGFISFISGVSMLGIALGVAALIIVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVI-QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
R+LG+ H+ I + L D I P+V+ PF++ QA ++ ++
Sbjct: 61 RMLGVVSHIEILSRDGQALPDIDAITAAARKNPEVVGAAPFIATQALIARGEDMKGTLVR 120
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
+ + + + G + G+++G +LAR+L + GD++ +++P G VT
Sbjct: 121 GIVPRLEPEVTDIATTAQKGTLDKLVPGEFGIVLGGELARSLFVQPGDQVTLVAPGGQVT 180
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
P G+ R K +TV+G F +YD+ + + ++AQ F LE +GI + +KD +
Sbjct: 181 PAGVVPRLKQFTVVGTFDSGHYEYDSALAMIHAEDAQRVFRLEGP-TGIRIKLKDLNEAR 239
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + L ++ DW ++ + +F+ +
Sbjct: 240 EVADQMAVTLPGQFLIRDWTRQNKTWFAAVQ 270
>gi|254560034|ref|YP_003067129.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Methylobacterium extorquens DM4]
gi|254267312|emb|CAX23144.1| putative Lipoprotein releasing system, transmembrane protein,
LolC/E family [Methylobacterium extorquens DM4]
Length = 439
Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats.
Identities = 101/266 (37%), Positives = 153/266 (57%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE I+A RYL + R+ +S+ + S +G+ +GV LI+V+SVMNGFR ++ +++G
Sbjct: 31 FAGFEWIIAGRYLRARRRGGGVSVVALFSVLGIAVGVATLIIVLSVMNGFRSELRSKIIG 90
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGHV DY +++RL+ + V V+P V GQAF S GGSGVLVRG+
Sbjct: 91 LNGHVFAAPIDRLFTDYVDLSDRLEKVAGVRAVVPMVQGQAFASSPY-GGSGVLVRGVRE 149
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
SD + G FD G+GV +GK LA LG+ GD++ + +P G TP G
Sbjct: 150 SDLPKIPAVSGAIKGGTLEGFDDGQGVALGKRLADALGLQAGDQVTLSTPKGASTPFGTA 209
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R+K+Y V +F + D+D M +M L EAQ +FN + VS IE+++ + DA+ + E
Sbjct: 210 PRTKTYAVKAIFEIGVTDFDTTMAFMPLAEAQAFFNRDGDVSVIEIYLDNADAVGEMREP 269
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ V++ DW+Q + FF E
Sbjct: 270 LEMAAERPVLLTDWRQTNRTFFGALE 295
>gi|188580266|ref|YP_001923711.1| lipoprotein releasing system, transhypothetical protein, LolC/E
family [Methylobacterium populi BJ001]
gi|179343764|gb|ACB79176.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Methylobacterium populi BJ001]
Length = 439
Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats.
Identities = 102/266 (38%), Positives = 152/266 (57%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE I+A RYL + R+ +S+ + S +G+ +GV LI+V+SVMNGFR ++ +++G
Sbjct: 31 FAGFEWIIAGRYLRARRRGGGVSVVALFSVLGIAVGVATLIIVLSVMNGFRTELRSKIIG 90
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGHV DY ++ RL+ + V V+P V GQAF S GGSGVLVRG+
Sbjct: 91 LNGHVFAAPIDRLFTDYVDLSERLEKVAGVRAVVPMVQGQAFASSPY-GGSGVLVRGVRE 149
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
SD + FD G+GV +GK LA LG+ GD++ + +P G TP G
Sbjct: 150 SDLPKIPAVSGAIKSGTLEGFDDGQGVALGKRLADALGLQAGDQVTLSTPKGASTPFGTA 209
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R+K+YTV +F + D+D M +M L EAQ +FN + VS IE+++ D DA+ + E
Sbjct: 210 PRTKTYTVKAIFEIGVTDFDTTMAFMPLAEAQAFFNRDGDVSVIEIYLDDADAVGEMREP 269
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ V++ DW+Q + FF E
Sbjct: 270 LEMAAERPVLLTDWRQTNRTFFGALE 295
>gi|262373141|ref|ZP_06066420.1| lipoprotein releasing system, transmembrane protein LolE
[Acinetobacter junii SH205]
gi|262313166|gb|EEY94251.1| lipoprotein releasing system, transmembrane protein LolE
[Acinetobacter junii SH205]
Length = 411
Score = 155 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 64/267 (23%), Positives = 119/267 (44%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R N FIS + +S IG+ +GV LI V+SVMNGF ++ RVL
Sbjct: 1 MFKPISLYIGLRYTRARRSNHFISFIALVSMIGLTLGVAVLITVLSVMNGFDRELKNRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ + L D+ + +++ P V V PF Q ++ ++
Sbjct: 61 GMVPQATV-SSTQILTDWPELVKKVEDHPHVTGVAPFTQLQGMLTAQGQVAGIMVTGIEP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ GN+ G+++GKD+ LG+ + D + ++ P +P G+
Sbjct: 120 EYEKKVSIIQNHMVAGNLGALKKGEFGIVLGKDMTDALGLGLNDSVTLVLPEATPSPAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K + ++G+F + D+ + Y++L +A L + G+ + + D A K +
Sbjct: 180 VPRFKRFKIVGIF-SVGAEVDSMVGYIALNDASTLLRLPDGAQGVRLKLDDIFAAPKVAD 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
IV L + +W + F+ +
Sbjct: 239 EIVSQLPSNFYASNWTYTHGNLFNAIQ 265
>gi|144899843|emb|CAM76707.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Magnetospirillum gryphiswaldense MSR-1]
Length = 414
Score = 155 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 98/267 (36%), Positives = 153/267 (57%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
IF FE +VA+RYL + RK FIS+ + S +G+ +GV LIVVM+VMNGFR++++ R+L
Sbjct: 2 IFDAFERMVAFRYLRARRKEGFISVIAGFSLLGIGLGVATLIVVMAVMNGFRQELLTRIL 61
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
GINGH+ + L + +A + +P V++V+P V GQ + SS ++
Sbjct: 62 GINGHMGVYGTGPALAQFDPLAQSIRGLPGVVRVIPTVEGQVMATSASSASGAIVRGVRP 121
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + F++ G +F G GV++G LA LG+ IGD + ++SP G+ T G
Sbjct: 122 DDLLAR--EIFAKGLGGSGEEFKNGDGVLVGYRLAEKLGLQIGDTVTLISPKGNATAFGT 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + YTV G F + +YD+G ++M L+ AQ YF +AV+ IEVF+ + D + +T
Sbjct: 180 VPRMRGYTVAGTFNVGMFEYDSGFMFMPLEAAQTYFKFPDAVTQIEVFLDNHDKVTETRN 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I R+ V + DWQQ FF+ +
Sbjct: 240 AIFRLTQGNVRIYDWQQANASFFNAVQ 266
>gi|237748452|ref|ZP_04578932.1| outer membrane lipoproteins ABC transporter membrane protein
[Oxalobacter formigenes OXCC13]
gi|229379814|gb|EEO29905.1| outer membrane lipoproteins ABC transporter membrane protein
[Oxalobacter formigenes OXCC13]
Length = 422
Score = 155 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 88/276 (31%), Positives = 146/276 (52%), Gaps = 7/276 (2%)
Query: 1 MSIFS--RFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFRE 55
M+IFS FE +V RY+ S ++ N FIS S IS G+ +GV ALI+VMSVMNGF++
Sbjct: 1 MNIFSNLPFEWLVGLRYIRSGKRSGRNRFISFISLISMSGIALGVAALIIVMSVMNGFQK 60
Query: 56 DMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSG 115
++ R+L + H+ IQ Y L D+Q A + P+V P+V GQA V+
Sbjct: 61 EVRDRMLSVIPHIEIQDMYGSLPDWQKTAAEVKKNPEVTGAAPYVVGQAMVTRNDMVRGV 120
Query: 116 VLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYG 175
++ + + G + N + IG +LARNL I GDK+ ++ P G
Sbjct: 121 IVRGIDPKEEAGVSDIARQFKAGKLGNLEPDSFNIAIGSELARNLRIGPGDKLTVIIPQG 180
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD 235
VTP G+ R K +TV G+F ++D+ ++++ +A F +A SG+ V ++D
Sbjct: 181 QVTPAGVLPRLKQFTVGGIFEAGHFEFDSTFAFINMNDAMRLFRT-DAPSGLRVQIRDMQ 239
Query: 236 AIEKTHENIVRIL-GNGVVVIDWQQRYQIFFSCYES 270
+ + + +L + V+V DW ++ + +F+ ++
Sbjct: 240 EAPEVAQQLSMMLQNDDVIVRDWSKQNRNWFAAVKT 275
>gi|240137563|ref|YP_002962034.1| putative Lipoprotein releasing system, transmembrane protein,
LolC/E family [Methylobacterium extorquens AM1]
gi|240007531|gb|ACS38757.1| putative Lipoprotein releasing system, transmembrane protein,
LolC/E family [Methylobacterium extorquens AM1]
Length = 439
Score = 155 bits (390), Expect = 7e-36, Method: Composition-based stats.
Identities = 100/266 (37%), Positives = 153/266 (57%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE I+A RYL + R+ +S+ + S +G+ +GV LI+V+SVMNGFR ++ +++G
Sbjct: 31 FAGFEWIIAGRYLRARRRGGGVSVVALFSVLGIAVGVATLIIVLSVMNGFRSELRSKIIG 90
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGHV DY +++RL+ + V V+P V GQAF S GGSGVLVRG+
Sbjct: 91 LNGHVFAAPIDRLFTDYVDLSDRLEKVAGVRAVVPMVQGQAFASSPY-GGSGVLVRGVRE 149
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+D + G FD G+GV +GK LA LG+ GD++ + +P G TP G
Sbjct: 150 ADLPKIPAVSGAIKGGTLEGFDDGQGVALGKRLADALGLQAGDQVTLSTPKGASTPFGTA 209
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R+K+Y V +F + D+D M +M L EAQ +FN + VS IE+++ + DA+ + E
Sbjct: 210 PRTKTYAVKAIFEIGVTDFDTTMAFMPLAEAQAFFNRDGDVSVIEIYLDNADAVGEMREP 269
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ V++ DW+Q + FF E
Sbjct: 270 LEMAAERPVLLTDWRQTNRTFFGALE 295
>gi|218529195|ref|YP_002420011.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Methylobacterium chloromethanicum CM4]
gi|218521498|gb|ACK82083.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Methylobacterium chloromethanicum CM4]
Length = 439
Score = 155 bits (390), Expect = 7e-36, Method: Composition-based stats.
Identities = 100/266 (37%), Positives = 153/266 (57%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE I+A RYL + R+ +S+ + S +G+ +GV LI+V+SVMNGFR ++ +++G
Sbjct: 31 FAGFEWIIAGRYLRARRRGGGVSVVALFSVLGIAVGVATLIIVLSVMNGFRSELRSKIIG 90
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGHV DY +++RL+ + V V+P V GQAF S GGSGVLVRG+
Sbjct: 91 LNGHVFAAPIDRLFTDYVDLSDRLEKVAGVRAVVPMVQGQAFASSPY-GGSGVLVRGVRE 149
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+D + G FD G+GV +GK LA LG+ GD++ + +P G TP G
Sbjct: 150 ADLPKIPAVSGAIKGGTLEGFDDGQGVALGKRLADALGLQAGDQVTLSTPKGASTPFGTA 209
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R+K+Y V +F + D+D M +M L EAQ +FN + VS IE+++ + DA+ + E
Sbjct: 210 PRTKTYAVKAIFEIGVTDFDTTMAFMPLAEAQAFFNRDGDVSVIEIYLDNADAVGEMREP 269
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ V++ DW+Q + FF E
Sbjct: 270 LEMAAERPVLLTDWRQTNRTFFGALE 295
>gi|120612344|ref|YP_972022.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Acidovorax citrulli AAC00-1]
gi|120590808|gb|ABM34248.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Acidovorax citrulli AAC00-1]
Length = 417
Score = 155 bits (390), Expect = 7e-36, Method: Composition-based stats.
Identities = 74/270 (27%), Positives = 132/270 (48%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNR---KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E+ + WRY + R +N FIS S +S +G+ +GV ALI+V+SVMNGF++++
Sbjct: 1 MQLPYELALGWRYTRAGRATRRNGFISFISGVSMLGIALGVAALIIVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + H+ I + + + G + G LVR
Sbjct: 61 RMLSVVSHIEIFAPQGAALPDPALTMAETRKNPEVVGAAPFVGSQALIARGEDMKGALVR 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
GI + + +R V V++G +LAR LG+ +GD + +++P G VTP
Sbjct: 121 GIDPDREGEVTDLAARNADAVRTLTPGSFHVVLGVELARALGVRVGDPVTLIAPGGQVTP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
G+ R K TV G+F +YD+ +V + +A+ F LE +GI + ++D +
Sbjct: 181 AGVVPRLKQMTVSGIFESGHYEYDSALVLLHHADAERIFRLEGP-TGIRLKLRDLHQAPE 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + R L +++ DW Q+ + +F+ +
Sbjct: 240 VTQELARSLSGDLLIRDWTQQNRTWFAAVQ 269
>gi|17545836|ref|NP_519238.1| lipoprotein releasing system transmembrane [Ralstonia solanacearum
GMI1000]
gi|17428130|emb|CAD14819.1| probable lipoprotein releasing system transmembrane [Ralstonia
solanacearum GMI1000]
Length = 416
Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats.
Identities = 73/271 (26%), Positives = 142/271 (52%), Gaps = 5/271 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY ++++ N+FIS S IS +G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MKFPYEWQIGWRYTRASKRASRNSFISFISLISMLGIALGVAALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + H+ I L D+Q AN +V+ P+V QA ++ + +L
Sbjct: 61 RMLSVLSHIEIMAPG-SLPDWQRTANEAMQNKEVVGAAPYVGAQAMITRDDAVRGVLLRG 119
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + G + + G+ +G ++AR LG+ GDK+ +++P G +TP
Sbjct: 120 VSPADEPKVSDIAKDFKSGTIDDLRPGEFGIALGAEMARGLGVRQGDKVTLVAPQGTITP 179
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
G+ R K +TV+G F ++D+ + +++++A+ F L +G+ + + D +
Sbjct: 180 AGVLPRLKQFTVIGTFESGHYEFDSSLALINMEDAERLFRLTGP-TGVRLKLVDMQRAPQ 238
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYES 270
E + R L + + DW ++ + +F+ ++
Sbjct: 239 VAEALSRTLTGELYIRDWSRQNKNWFAAVQT 269
>gi|126667255|ref|ZP_01738228.1| ABC-type transport system, involved in lipoprotein release,
permease component [Marinobacter sp. ELB17]
gi|126628200|gb|EAZ98824.1| ABC-type transport system, involved in lipoprotein release,
permease component [Marinobacter sp. ELB17]
Length = 413
Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats.
Identities = 74/266 (27%), Positives = 130/266 (48%), Gaps = 2/266 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RY+ + R+N FIS S S IG+M+GV LI+V+SVMNGF ++ +R+L
Sbjct: 1 MFKPLSFYIGLRYIAAKRRNHFISFISLTSMIGLMLGVAVLIIVLSVMNGFDRELKQRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H +I + P+ +++ + ++ P V+ PF+ GQ V+G +L +
Sbjct: 61 GMVPHAII-EGSGPIENWEALDAAVEKHPRVLAAAPFIQGQGMVTGGGEVRGVLLNGILP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + G++ + G+IIG+ LA +L + +GDKI ++ P VTP G+
Sbjct: 120 DQERTVSIIEDHMEQGSLDDLKSGEFGIIIGRFLASSLRLQLGDKITVVLPEASVTPAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV G+F + D + + +A + GI + V D A + E
Sbjct: 180 LPRLKRFTVKGVF-SVGAELDGSYTLIHMDDAAKLMRTDGKAQGIRLLVDDLFAAPRVAE 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCY 268
++L + DW + + F
Sbjct: 239 QAAQLLSGRYYISDWTRTHGNLFQAI 264
>gi|50085711|ref|YP_047221.1| outer membrane lipoproteins ABC transporter membrane protein
[Acinetobacter sp. ADP1]
gi|11345437|gb|AAG34708.1|AF320001_1 putative integral membrane protein [Acinetobacter sp. BD413]
gi|49531687|emb|CAG69399.1| transport protein of outer membrane lipoproteins (ABC superfamily,
membrane) [Acinetobacter sp. ADP1]
Length = 411
Score = 154 bits (389), Expect = 9e-36, Method: Composition-based stats.
Identities = 66/267 (24%), Positives = 121/267 (45%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R N FIS + +S IG+ +GV LI V+SVMNGF ++ RVL
Sbjct: 1 MFKPISLYIGLRYTRARRSNHFISFIALVSMIGLTLGVAVLITVLSVMNGFDRELKNRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ I L ++ +A +++ V+ V PF Q ++ ++
Sbjct: 61 GMVPQATI-SSTQILTNWPELAKKVEGHKHVVGVAPFTQLQGMLTAQGQVAGIMVSGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G++ N G+++GK + LG+ + D + ++ P +P G+
Sbjct: 120 QYEKKVSIIQNHMVAGSIDNLKKGEFGIVLGKQMTDALGLGLNDNVTLVLPEATPSPAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K + ++G+F + D+ M Y++L +A L + GI + + D A + +
Sbjct: 180 VPRFKRFKIVGIF-SIGAEVDSMMGYIALNDASTLLRLPDGAQGIRLKLDDIFAAPQVAD 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+IVR L +W + FS +
Sbjct: 239 DIVRTLPPNFYASNWTYTHGNLFSAIQ 265
>gi|134095407|ref|YP_001100482.1| outer membrane lipoproteins ABC transporter membrane protein
[Herminiimonas arsenicoxydans]
gi|133739310|emb|CAL62359.1| Lipoprotein-releasing system transmembrane protein LolC
[Herminiimonas arsenicoxydans]
Length = 421
Score = 154 bits (389), Expect = 9e-36, Method: Composition-based stats.
Identities = 76/275 (27%), Positives = 145/275 (52%), Gaps = 6/275 (2%)
Query: 1 MSIFS--RFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFRE 55
MSI FE +V RY + R+ N+FIS S IS G+ +GV ALI+V+SVMNGF++
Sbjct: 1 MSIIKNLSFEWLVGIRYTRAGRRSGRNSFISFISLISMAGIALGVAALIIVLSVMNGFQK 60
Query: 56 DMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSG 115
++ R+L + H+ + + Y L D+Q A +V P+V QA ++ +
Sbjct: 61 EVRDRMLSVLSHIEVFEPYGGLPDWQATAREAFMNKEVRGAAPYVDAQAMMTRDETLRGV 120
Query: 116 VLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYG 175
+ + + + + G++ + +++G +LAR++ +GDK+ +++P G
Sbjct: 121 AVRGVLPDEEPKVSDVASQVKEGSLHDLRSGEFNIVLGNELARSMNARLGDKVTMIAPQG 180
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD 235
VTP G+ R K + V+G+F +YD+ + ++ + +A F L A SG+ + ++D
Sbjct: 181 QVTPAGVIPRLKQFRVVGIFDSGHFEYDSTLAFIHIDDAMTMFKL-GAPSGLRLKIEDMQ 239
Query: 236 AIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ ++ R L V++ DW ++ + +F+ ++
Sbjct: 240 RAPQVALDLSRTLSGDVLIRDWSKQNRNWFAAVQT 274
>gi|299067168|emb|CBJ38364.1| outer membrane-specific lipoprotein transporter subunit ; membrane
component of ABC superfamily [Ralstonia solanacearum
CMR15]
Length = 416
Score = 154 bits (389), Expect = 9e-36, Method: Composition-based stats.
Identities = 73/271 (26%), Positives = 142/271 (52%), Gaps = 5/271 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY ++++ N+FIS S IS +G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MKFPYEWQIGWRYTRASKRASRNSFISFISLISMLGIALGVAALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + H+ I L D+Q AN +V+ P+V QA ++ + +L
Sbjct: 61 RMLSVLSHIEIMAPG-SLPDWQRTANEAMQNKEVVGAAPYVGAQAMITRDDAVRGVLLRG 119
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + G + + G+ +G ++AR LG+ GDK+ +++P G +TP
Sbjct: 120 VSPADEPKVSDIAKDFKSGAIDDLRPGEFGIALGAEMARGLGVRQGDKVTLVAPQGTITP 179
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
G+ R K +TV+G F ++D+ + +++++A+ F L +G+ + + D +
Sbjct: 180 AGVLPRLKQFTVIGTFESGHYEFDSSLALINMEDAERLFRLTGP-TGVRLKLVDMQRAPQ 238
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYES 270
E + R L + + DW ++ + +F+ ++
Sbjct: 239 VAEALSRTLTGELYIRDWSRQNKNWFAAVKT 269
>gi|260223258|emb|CBA33640.1| Lipoprotein-releasing system transmembrane protein lolC
[Curvibacter putative symbiont of Hydra magnipapillata]
Length = 418
Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 76/271 (28%), Positives = 138/271 (50%), Gaps = 5/271 (1%)
Query: 3 IFSRFEVIVAWRYLFSNR---KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ FE+ + WRY + R +N FIS S +S +G+ +GV ALI+V+SVMNGF++++
Sbjct: 1 MQLPFELTIGWRYTRAGRATRRNGFISFISGVSMLGISLGVAALIIVLSVMNGFQKEVRD 60
Query: 60 RVLGINGH-VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
R+LG+ H V L + + P VI PF++ QA ++ ++
Sbjct: 61 RMLGVVSHIEVYAADGQALPNVATTMAQAKENPQVIGAAPFIAAQALIARGEEMKGAMVR 120
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
+ + ++ GV++G +LAR++G+ +GDK+ +++P G VT
Sbjct: 121 GIDPALEPQVSDFATGAQQEALAWLVPGEFGVVLGGELARSMGVRVGDKVTLVAPNGQVT 180
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
P G+ R K TV+G F +YD+ + + ++A F LE SG+ + +KD
Sbjct: 181 PAGVVPRLKQMTVVGTFDSGHYEYDSALALLHWEDAARIFRLEGP-SGVRLKLKDLHQAR 239
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + R L +V+ DW ++ + +F+ +
Sbjct: 240 EVADQLARSLSGDLVLRDWTRQNRSWFAAVQ 270
>gi|160900833|ref|YP_001566415.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Delftia acidovorans SPH-1]
gi|160366417|gb|ABX38030.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Delftia acidovorans SPH-1]
Length = 423
Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 74/272 (27%), Positives = 130/272 (47%), Gaps = 4/272 (1%)
Query: 1 MSIFSRFEVIVAWRYLFSNR---KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDM 57
M + +E+ V WRY + R +N FIS S +S +G+ +GV ALI+V+SVMNGF++++
Sbjct: 5 MPMQFPYELAVGWRYTRAGRATRRNGFISFISGVSMLGIALGVAALIIVLSVMNGFQKEV 64
Query: 58 IKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVL 117
R+L + H+ I + R + + G L
Sbjct: 65 RDRMLSVVSHIEIFAPQGAALPDLERTMREARANPDVLGAAPFVAAQALLARGEDMKGTL 124
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
VRGI + + + + + V++G +LAR+LG+ GD + +++P G V
Sbjct: 125 VRGIDPAREGEVTDVAATNAEVLKRLVPGEFNVVLGVELARSLGVRQGDMVTLIAPGGQV 184
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
TP G+ R K V G F +YD+ +V M ++AQ F LE +GI + +KD
Sbjct: 185 TPAGVVPRLKQMHVAGTFDSGHYEYDSALVMMHYEDAQRLFRLEGP-TGIRLKLKDLHEA 243
Query: 238 EKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + + +++ DW Q+ + +F+ +
Sbjct: 244 PRVAMELAHTITDRLLIRDWTQQNRTWFAAVQ 275
>gi|217970399|ref|YP_002355633.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Thauera sp. MZ1T]
gi|217507726|gb|ACK54737.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Thauera sp. MZ1T]
Length = 418
Score = 154 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 79/269 (29%), Positives = 138/269 (51%), Gaps = 5/269 (1%)
Query: 5 SRFEVIVAWRYLFSNRK----NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+E++V RY S ++ N FIS S +S G+ +GV ALIVV+SVMNGF+E++ R
Sbjct: 1 MPYEILVGLRYTRSRKRAQGRNRFISFISLVSMFGIALGVAALIVVLSVMNGFQEELRTR 60
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+LG+ HV +Q L+ +Q +A+ P V P+V Q +S ++
Sbjct: 61 ILGVASHVQVQSPEGGLMAWQQVADESLRNPSVRAAAPYVQEQGMLSFDEGVRGTLVRGV 120
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
I +++ G+ G+++G+DLA L + +G+K+ +++P G VTP
Sbjct: 121 IPSAEEKVADFGRYMQAGSFDALQAGRFGIVLGRDLAAALRVRLGEKVTLIAPQGLVTPA 180
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ R K + V+G+F +YD+ + + + +AQ + L +AVSG+ + + D A +
Sbjct: 181 AVLPRVKQFEVVGIFEAGMYEYDSSLALVHIADAQALYRLGDAVSGVRLKLDDLFAAPRV 240
Query: 241 HENIVRILGN-GVVVIDWQQRYQIFFSCY 268
+ + G+VV DW + + FF
Sbjct: 241 ARELAMTISEPGLVVADWTRSHANFFRAV 269
>gi|148259951|ref|YP_001234078.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Acidiphilium cryptum JF-5]
gi|146401632|gb|ABQ30159.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Acidiphilium cryptum JF-5]
Length = 415
Score = 154 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 92/267 (34%), Positives = 146/267 (54%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS FE VA+RYL + + F+SI + S +G+ +GV LI+VMSVMNGFR++++ ++L
Sbjct: 1 MFSAFERRVAFRYLRARKGERFVSIIAIFSLVGIALGVATLIIVMSVMNGFRQELLAQIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+NG + + + + Y A RL+ IP VI +P V G+ ++G G G + RGI
Sbjct: 61 GLNGDIGVYGAGHNITQYDAAAGRLEKIPGVISAIPIVQGEVLMTGPHGGAIGGVARGIQ 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ L+ D G+ + +G +A LGIS+G I ++ P GD T +G
Sbjct: 121 PDGLAKLRTVSRHIVAGSLKD-FTGRNIAVGAGVASQLGISLGGTITLVLPQGDATIIGT 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R +S+ V +FR YD+ V++ L AQ F ++A + I++FVK+PD
Sbjct: 180 IPRIQSFHVSAIFRTGMAQYDSSFVFLPLTSAQTLFRAKDAATQIQLFVKNPDNTGPIKA 239
Query: 243 NIVRILGN-GVVVIDWQQRYQIFFSCY 268
I + +G+ V V+DWQ FF+
Sbjct: 240 AIPKAMGSAPVNVVDWQDSNNAFFAAV 266
>gi|319791977|ref|YP_004153617.1| lipoprotein releasing system, transmembrane protein, lolc/e family
[Variovorax paradoxus EPS]
gi|315594440|gb|ADU35506.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Variovorax paradoxus EPS]
Length = 418
Score = 154 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 73/271 (26%), Positives = 134/271 (49%), Gaps = 5/271 (1%)
Query: 3 IFSRFEVIVAWRYLFSNR---KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E+ + WRY + R +N FIS S +S +G+ +GV ALI+V+SVMNGF++++
Sbjct: 1 MRLPYELQLGWRYTRAGRATRRNGFISFISGVSMLGIALGVAALIIVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPL-VDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
R+LG+ H+ I + I P+VI PF++ QA ++ ++
Sbjct: 61 RMLGVVSHIEIFSRDGQALQSLDEIMAAARKNPEVIGAAPFINTQALIARGEDMKGAIVR 120
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
+ G G+++G +LAR++ + GDK+ +++P G VT
Sbjct: 121 GIDPKLEPEVTDTGGIASKGTFDKLVPGEFGIVLGVELARSMFVQPGDKVTLVAPGGQVT 180
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
P G+ R K +TV+G F +YD+ + + Q+A F LE +GI + +KD +
Sbjct: 181 PAGVVPRLKQFTVVGTFDSGHYEYDSALAMVHEQDAAKVFRLEGP-TGIRLKLKDLNEAR 239
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + L ++ DW ++ + +F+ +
Sbjct: 240 DVADQLAVSLPGEFLIRDWTRQNKTWFAAVQ 270
>gi|154253643|ref|YP_001414467.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Parvibaculum lavamentivorans DS-1]
gi|154157593|gb|ABS64810.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Parvibaculum lavamentivorans DS-1]
Length = 427
Score = 154 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 99/266 (37%), Positives = 146/266 (54%), Gaps = 2/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F FE ++A RYL + R+ FIS+ + SF G+M+GV LI+VMSVMNGFR +++ R+LG
Sbjct: 16 FGAFEWLLAMRYLRARRREGFISVIAGFSFAGIMLGVAVLIIVMSVMNGFRTELLSRILG 75
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGH+ ++ + DY IA R+ +P V+ V+P V GQ V SG LVRG+
Sbjct: 76 LNGHMFVRGVGASIADYDAIAERIRSVPGVVSVMPLVDGQVMVQSP-QNASGALVRGLRE 134
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D L D GV IG LA+N+G+++GD I +LSP G +TP G
Sbjct: 135 QDLKSLSVVADNITVGS-LDGFDEGGVAIGSRLAQNMGLTVGDSITLLSPRGAITPFGTA 193
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R S+ + +F + +YD V+M L EA+ +F VS +E+ ++PD +
Sbjct: 194 PRVASFPIRAIFEIGMSEYDASFVFMPLDEARGFFRTYEGVSALELRFQNPDKVNDFIRP 253
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
++ G V+ WQQ Q FFS +
Sbjct: 254 VMEAAGPCCNVLTWQQMNQSFFSALQ 279
>gi|326403095|ref|YP_004283176.1| putative ABC transporter permease [Acidiphilium multivorum AIU301]
gi|325049956|dbj|BAJ80294.1| putative ABC transporter permease protein [Acidiphilium multivorum
AIU301]
Length = 415
Score = 154 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 92/267 (34%), Positives = 147/267 (55%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS FE VA+RYL + + F+SI + S +G+ +GV LI+VMSVMNGFR++++ ++L
Sbjct: 1 MFSAFERRVAFRYLRARKGERFVSIIAIFSLVGIALGVATLIIVMSVMNGFRQELLAQIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+NG + + + + Y A RL+ IP VI +P V G+ ++G G G + RGI
Sbjct: 61 GLNGDIGVYGAGHNITQYDAAAGRLEKIPGVISAIPIVQGEVLMTGPHGGAIGGVARGIQ 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ L+ D G+ + +G +A LGIS+G I ++ P GD T +G
Sbjct: 121 PDGLAKLRTVSRHIVAGSLKD-FTGRNIAVGAGVASQLGISLGGTITLVLPQGDATIIGT 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R +S+ V +FR YD+ V++ L AQ F ++A + I++FVK+PD
Sbjct: 180 IPRIQSFHVSAIFRTGMAQYDSSFVFLPLTSAQTLFRAKDAATQIQLFVKNPDNTGPIKA 239
Query: 243 NIVRILGN-GVVVIDWQQRYQIFFSCY 268
I +++G+ V V+DWQ FF+
Sbjct: 240 AIPKVMGSAPVNVVDWQDSNNAFFAAV 266
>gi|285018590|ref|YP_003376301.1| ABC transporter-type lipoprotein-releasing ABC transporter
[Xanthomonas albilineans GPE PC73]
gi|283473808|emb|CBA16310.1| putative abc transporter-type lipoprotein-releasing abc transporter
[Xanthomonas albilineans]
Length = 414
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 66/267 (24%), Positives = 130/267 (48%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RYL + R+N FIS S S +G+ +GV LI ++VM+GF++++ R+L
Sbjct: 1 MFKPIPVAIGLRYLRAKRRNNFISFISMASILGIALGVTVLITTLAVMSGFQKEIRDRLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + + P+ D++ + P V P+V +A ++GL + + V +
Sbjct: 61 QMAAHATVSAQGAPMQDWRHAVDVAMGDPRVAGAAPYVEEEALLTGLRNQPAIVRGIVPA 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G+V + +++G++LA LG+++GDK+ ++ +PMGM
Sbjct: 121 EEAKVSVLAQKMKQ-GSVDSLVPGSYNIVLGQELALWLGVAVGDKVVVMLGEPQASPMGM 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV G+F + + D G+ S+ + Q + + V+G+ + + D D
Sbjct: 180 VPRYKRFTVSGIFEAGYNEVDRGLAVTSMADLQRVLRMGDGVTGVRLKLHDMDLAWNVAR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ L +V DW + + +
Sbjct: 240 DLALKLRGPYMVSDWTRENANLYQSLK 266
>gi|264676980|ref|YP_003276886.1| Lipoprotein-releasing systemtransmembrane protein lolC [Comamonas
testosteroni CNB-2]
gi|299531552|ref|ZP_07044958.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Comamonas testosteroni S44]
gi|262207492|gb|ACY31590.1| Lipoprotein-releasing systemtransmembrane protein lolC [Comamonas
testosteroni CNB-2]
gi|298720515|gb|EFI61466.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Comamonas testosteroni S44]
Length = 417
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 79/270 (29%), Positives = 130/270 (48%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNR---KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E+ V WRY + R +N FIS S +S +G+ +GV ALI+V+SVMNGF++++
Sbjct: 1 MQFPYELAVGWRYTRAGRATRRNGFISFISGVSMLGIALGVAALIIVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV I + R + + G LVR
Sbjct: 61 RMLSVVSHVEIYAPQGAPLPDVERTMREARANPDVVGAAPFVAAQALLARGEDMKGALVR 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
GI + + + + + V++G +LARNLG+S GD I +++P G VTP
Sbjct: 121 GIDPAREGEVTDLAATSGEVLKRLVPGEFKVVLGIELARNLGVSEGDVITLIAPSGQVTP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
G+ R K TV G F +YD+ +V M ++AQ F LE +GI + +KD +
Sbjct: 181 AGVLPRMKQMTVAGTFDSGHYEYDSALVMMHYEDAQRIFRLEGP-TGIRLKLKDLHEAPR 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L + + + DW Q+ + +F+ +
Sbjct: 240 VAHELADTLTDRLFIRDWTQQNKTWFAAVQ 269
>gi|254469383|ref|ZP_05082788.1| lipoprotein releasing system transmembrane protein lole
[Pseudovibrio sp. JE062]
gi|211961218|gb|EEA96413.1| lipoprotein releasing system transmembrane protein lole
[Pseudovibrio sp. JE062]
Length = 407
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 114/260 (43%), Positives = 156/260 (60%), Gaps = 1/260 (0%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
++A RYL S RK FISI + +SF+G+ +GV LI+VM+VMNGFR +++ ++LGINGHV+
Sbjct: 1 MLAGRYLRSRRKETFISIIAGLSFLGITLGVATLIIVMAVMNGFRTELLTKILGINGHVL 60
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+Q PL DYQ + +L I V +PFV GQA +SG S+ G L RG+ SD L
Sbjct: 61 VQPIDSPLNDYQETSVKLAGIDGVDFAMPFVEGQAMISGPSADL-GALFRGVHKSDLDKL 119
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
FD G+G+ IG LAR LG+++GD + +++P G +TPMGM R K Y
Sbjct: 120 DLVSGNVLLGTLEGFDEGEGIAIGSRLARQLGVTVGDTVRVITPRGSITPMGMTPRVKGY 179
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
V +F++ +YD + +M EAQLYFN E +GIEV+ DPDA+ I G
Sbjct: 180 PVSAIFQIGMSEYDGTIAFMPFNEAQLYFNKEGLATGIEVYADDPDAVGPLRPMIEEEAG 239
Query: 250 NGVVVIDWQQRYQIFFSCYE 269
V V DW+QR FFS E
Sbjct: 240 RPVFVSDWRQRNMTFFSALE 259
>gi|169632696|ref|YP_001706432.1| outer membrane lipoproteins ABC transporter membrane protein
[Acinetobacter baumannii SDF]
gi|169151488|emb|CAP00244.1| transport protein of outer membrane lipoproteins (ABC superfamily,
membrane) [Acinetobacter baumannii]
Length = 411
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 63/267 (23%), Positives = 125/267 (46%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R N FIS + +S +G+ +GV LI V+SVMNGF ++ RVL
Sbjct: 1 MFKPISLYIGLRYTRARRSNHFISFIALVSMVGLTLGVAVLITVLSVMNGFDRELKNRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ + L D+ + R++ P + V PF Q ++ ++
Sbjct: 61 GMVPQATV-SSTQILTDWPELVKRVENHPHMTGVAPFTQLQGMLTAQGQVAGIMVTGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G++ + G+++GKD+A +LG+ + D + ++ P +P G+
Sbjct: 120 KYEKNVSIIQNHIVAGSLDSLKKGEFGIVLGKDMADSLGLRLNDSVTLVLPEATPSPAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K + V+G+F + D+ + Y++L +A L + G+ + + D A + +
Sbjct: 180 VPRFKRFKVVGIF-SVGAEVDSMVGYIALYDASTLLRLPDGAQGVRLKLDDIFAAPQVAD 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+IV+ L + +W + F+ +
Sbjct: 239 DIVKNLPSNFYATNWTYTHGNLFNAIQ 265
>gi|319764015|ref|YP_004127952.1| lipoprotein releasing system, transmembrane protein, lolc/e family
[Alicycliphilus denitrificans BC]
gi|330823721|ref|YP_004387024.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Alicycliphilus denitrificans K601]
gi|317118576|gb|ADV01065.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Alicycliphilus denitrificans BC]
gi|329309093|gb|AEB83508.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Alicycliphilus denitrificans K601]
Length = 417
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 73/270 (27%), Positives = 131/270 (48%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNR---KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E+ + WRY + R +N FIS S +S +G+ +GV ALI+V+SVMNGF++++
Sbjct: 1 MQIPYELALGWRYTRAGRATRRNGFISFISGVSMLGIALGVAALIIVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + H+ I + + + GVLVR
Sbjct: 61 RMLSVVSHIEIFAPGGAALPDPQRTLAEARANPNVIGAAPFVAAQALLARGEDMKGVLVR 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
GI + + + + + G V++G +LAR LG+ GD + +++P G VTP
Sbjct: 121 GIDPAREPEVTDLAAESVQGLQALAPGGFRVVLGSELARQLGVQAGDVVTLIAPSGQVTP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
G+ R K TV G F +YD+ +V M ++A+ F LE +G+ + ++D A +
Sbjct: 181 AGVVPRLKQMTVAGTFNSGHYEYDSALVLMHHEDAERIFRLEGP-TGVRLKLEDLHAAPE 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + L +++ DW Q+ + +F+ +
Sbjct: 240 VAQQLAHSLSGDLLIRDWTQQNKTWFAAVQ 269
>gi|258592405|emb|CBE68714.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[NC10 bacterium 'Dutch sediment']
Length = 416
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 91/276 (32%), Positives = 145/276 (52%), Gaps = 11/276 (3%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
FE+ V RYL + R AFIS+ + IS GV +GVMALIVV++VM+GF D+ ++LG
Sbjct: 1 MPFELFVGLRYLKARRGQAFISLITLISIGGVALGVMALIVVLAVMSGFERDLRSKILGT 60
Query: 65 NGH-VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLS---------SGGS 114
N H +++ + D A R+ +P V+ V PF Q +S
Sbjct: 61 NAHLWIVRAGDRGIEDPVQTAARVREVPRVVAVSPFTYHQVMLSTGRGAGGAVLRGIDLD 120
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
F+ + + + S +G+IIG+ LA NLG+ +G ++N++SP+
Sbjct: 121 SAREVTTLTESFAEVDPTRLKEPAEGSGWRLDPEGIIIGRALATNLGVGLGGRVNVISPF 180
Query: 175 GDV-TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKD 233
G+V TP G+ R +S+TV G+F M +YD+ + Y+++ AQ F + +V+GIEV V D
Sbjct: 181 GNVLTPFGLAPRMRSFTVAGIFEMGMYEYDSALAYITITAAQQLFQMGQSVTGIEVKVDD 240
Query: 234 PDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ +I R LG V DW Q ++ F+ +
Sbjct: 241 LYRAKEVGADIQRRLGFPYVARDWMQLHRNLFAALK 276
>gi|329903720|ref|ZP_08273596.1| Lipoprotein releasing system transmembrane protein LolC
[Oxalobacteraceae bacterium IMCC9480]
gi|327548241|gb|EGF32940.1| Lipoprotein releasing system transmembrane protein LolC
[Oxalobacteraceae bacterium IMCC9480]
Length = 421
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 80/275 (29%), Positives = 148/275 (53%), Gaps = 6/275 (2%)
Query: 1 MSIFS--RFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFRE 55
MSI FE +V RY + R+ N+FIS S IS G+ +GV ALIVV+SVMNGF++
Sbjct: 1 MSILKNLPFEWLVGIRYTRAGRRSGRNSFISFISLISMAGIALGVAALIVVLSVMNGFQK 60
Query: 56 DMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSG 115
++ R+L + H+ + L D++ A +V P+V+GQA ++
Sbjct: 61 EVRDRMLSVLPHIEVFDPVNGLTDWKATAKEAFLDKEVKGAAPYVAGQAMMTRDGVLRGV 120
Query: 116 VLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYG 175
++ + + + + + + G ++ +++G +LAR L IGD++ ++SP G
Sbjct: 121 IVRGVLPSEESNVSEVAAQVRQGKFTDLRPGEFNIVLGGELARALSAGIGDRVTLVSPEG 180
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD 235
VTP G+ R K++TV+G+F +YD+ + +M + +A+ F L NA +G+ + + D
Sbjct: 181 QVTPAGVVPRYKAFTVVGIFEAGHYEYDSTLAFMHIDDAEKMFRL-NAPTGVRLRIDDMQ 239
Query: 236 AIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
++ RI+ V++ DW ++ + +F+ ++
Sbjct: 240 RAPLVARDLSRIMTGNVLISDWSKQNKTWFAAVQT 274
>gi|311694961|gb|ADP97834.1| outer membrane-specific lipoprotein transporter subunit LolE
[marine bacterium HP15]
Length = 413
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 81/266 (30%), Positives = 128/266 (48%), Gaps = 2/266 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+N FIS S S IG+M+GV LI+V+SVMNGF ++ +R+L
Sbjct: 1 MFRPLSLYIGLRYTAAKRRNHFISFISLTSMIGLMLGVAVLIIVLSVMNGFDRELKQRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I Q PL D+Q I ++ P V+ PF+ GQ V+G + VL +
Sbjct: 61 GMVPHATI-QGAGPLDDWQSIDAKVQQHPRVLAAAPFIQGQGMVTGGGNVRGVVLNGILP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G++++ G+IIG+ +A +L + IGDK+ ++ P VTP G+
Sbjct: 120 EEERTVSIIENHMVEGSLNDLVSGEFGIIIGRLMAASLRLQIGDKVTVVLPEASVTPAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV G+F + D + + +A GI + V D A K +
Sbjct: 180 LPRLKRFTVKGIF-SVGAELDGNYTLIHMDDAAKLMRTGGKAEGIRLLVDDLFAAPKVSQ 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCY 268
LG V DW + + F
Sbjct: 239 QAAESLGGRYYVSDWTRTHGNLFQAI 264
>gi|262278133|ref|ZP_06055918.1| outer membrane lipoproteins ABC transporter membrane protein
[Acinetobacter calcoaceticus RUH2202]
gi|262258484|gb|EEY77217.1| outer membrane lipoproteins ABC transporter membrane protein
[Acinetobacter calcoaceticus RUH2202]
Length = 411
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 64/267 (23%), Positives = 125/267 (46%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R N FIS + +S +G+ +GV LI V+SVMNGF ++ RVL
Sbjct: 1 MFKPISLYIGLRYTRARRSNHFISFIALVSMVGLTLGVAVLITVLSVMNGFDRELKNRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ + L D+ + R++ P V V PF Q ++ ++
Sbjct: 61 GMVPQATV-SSTQILTDWPELVKRVEHHPHVTGVAPFTQLQGMLTAQGQVAGIMVTGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G++ + G+++GKD+A +LG+ + D + ++ P +P G+
Sbjct: 120 KYEKNVSIIQNHIVAGSLDSLKKGEFGIVLGKDMADSLGLRLNDSVTLVLPEATPSPAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K + V+G+F + D+ + Y++L +A L + G+ + + D A K +
Sbjct: 180 VPRFKRFKVVGIF-SVGAEVDSMVGYIALYDASTLLRLPDGAQGVRLKLDDIFAAPKVAD 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++V+ L + +W + F+ +
Sbjct: 239 DLVKSLPSNFYATNWTYTHGNLFNAIQ 265
>gi|184159176|ref|YP_001847515.1| ABC transporter [Acinetobacter baumannii ACICU]
gi|183210770|gb|ACC58168.1| ABC-type transport system [Acinetobacter baumannii ACICU]
Length = 418
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 64/267 (23%), Positives = 125/267 (46%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R N FIS + +S +G+ +GV LI V+SVMNGF ++ RVL
Sbjct: 8 MFKPISLYIGLRYTRARRSNHFISFIALVSMVGLTLGVAVLITVLSVMNGFDRELKNRVL 67
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ + L D+ + R++ P V V PF Q ++ ++
Sbjct: 68 GMVPQATV-SSTQILTDWPELVKRVENHPHVTGVAPFTQLQGMLTAQGQVAGIMVTGIDP 126
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G++ + G+++GKD+A +LG+ + D + ++ P +P G+
Sbjct: 127 KYEKNVSIIQNHIVAGSLDSLKKGEFGIVLGKDMADSLGLRLNDSVTLVLPEATPSPAGV 186
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K + V+G+F + D+ + Y++L +A L + G+ + + D A + +
Sbjct: 187 VPRFKRFKVVGIF-SVGAEVDSMVGYIALYDASTLLRLPDGAQGVRLKLDDIFAAPQVAD 245
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+IV+ L + +W + F+ +
Sbjct: 246 DIVKNLPSNFYATNWTYTHGNLFNAIQ 272
>gi|262379385|ref|ZP_06072541.1| lipoprotein releasing system, transmembrane protein LolE
[Acinetobacter radioresistens SH164]
gi|262298842|gb|EEY86755.1| lipoprotein releasing system, transmembrane protein LolE
[Acinetobacter radioresistens SH164]
Length = 411
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 62/267 (23%), Positives = 117/267 (43%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R N FIS + +S IG+ +GV LI V+SVMNGF ++ RVL
Sbjct: 1 MFKPISLYIGLRYTRARRSNHFISFIALVSMIGLTLGVAVLITVLSVMNGFDRELKNRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ + L D+ +A +++ V PF Q ++ ++
Sbjct: 61 GMIPQATV-SSTQILTDWPELAKKVESHEHVTGAAPFTQLQGMLTAQGQVAGLMVTGIEP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G++ + G+++GK + LG+ + D + ++ P +P G+
Sbjct: 120 QYEKKVSIIQDHMVEGSIDSLKKGEFGIVLGKQMTDALGLGLNDSVTLVLPEATPSPAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K + ++G+F + D+ M Y++L +A L + G+ + + D + +
Sbjct: 180 VPRFKRFKIVGIF-SIGAEVDSMMGYIALNDASTLLRLPDGAQGVRLKLDDIFSAPQVAS 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+I R L DW + FS +
Sbjct: 239 SIARELPGNFYASDWTYTHGNLFSAIQ 265
>gi|255320329|ref|ZP_05361513.1| lipoprotein-releasing system transmembrane protein LolE
[Acinetobacter radioresistens SK82]
gi|255302524|gb|EET81757.1| lipoprotein-releasing system transmembrane protein LolE
[Acinetobacter radioresistens SK82]
Length = 419
Score = 153 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 62/267 (23%), Positives = 117/267 (43%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R N FIS + +S IG+ +GV LI V+SVMNGF ++ RVL
Sbjct: 9 MFKPISLYIGLRYTRARRSNHFISFIALVSMIGLTLGVAVLITVLSVMNGFDRELKNRVL 68
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ + L D+ +A +++ V PF Q ++ ++
Sbjct: 69 GMIPQATV-SSTQILTDWPELAKKVESHEHVTGAAPFTQLQGMLTAQGQVAGLMVTGIEP 127
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G++ + G+++GK + LG+ + D + ++ P +P G+
Sbjct: 128 QYEKKVSIIQDHMVEGSIDSLKKGEFGIVLGKQMTDALGLGLNDSVTLVLPEATPSPAGV 187
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K + ++G+F + D+ M Y++L +A L + G+ + + D + +
Sbjct: 188 VPRFKRFKIVGIF-SIGAEVDSMMGYIALNDASTLLRLPDGAQGVRLKLDDIFSAPQVAS 246
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+I R L DW + FS +
Sbjct: 247 SIARELPGNFYASDWTYTHGNLFSAIQ 273
>gi|293609881|ref|ZP_06692183.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828333|gb|EFF86696.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 411
Score = 153 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 63/267 (23%), Positives = 125/267 (46%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R N FIS + +S +G+ +GV LI V+SVMNGF ++ RVL
Sbjct: 1 MFKPISLYIGLRYTRARRSNHFISFIALVSMVGLTLGVAVLITVLSVMNGFDRELKNRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ + L D+ + R++ P V V PF Q ++ ++
Sbjct: 61 GMVPQATV-SSTQILTDWPELVKRVEHHPHVTGVAPFTQLQGMLTAQGQVAGIMVTGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G++ + G+++GKD+A +LG+ + D + ++ P +P G+
Sbjct: 120 KYEKNVSIIQNHIVAGSLDSLKKGEFGIVLGKDMADSLGLRLNDSVTLVLPEATPSPAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K + V+G+F + D+ + Y++L +A L + G+ + + D A + +
Sbjct: 180 VPRFKRFKVVGIF-SVGAEVDSMVGYIALYDASTLLRLPDGAQGVRLKLDDIFAAPQVAD 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++V+ L + +W + F+ +
Sbjct: 239 DLVKSLPSNFYATNWTYTHGNLFNAIQ 265
>gi|169795040|ref|YP_001712833.1| outer membrane lipoproteins ABC transporter membrane protein
[Acinetobacter baumannii AYE]
gi|260556523|ref|ZP_05828741.1| lipoprotein releasing system, transmembrane protein LolE
[Acinetobacter baumannii ATCC 19606]
gi|169147967|emb|CAM85830.1| transport protein of outer membrane lipoproteins (ABC superfamily,
membrane) [Acinetobacter baumannii AYE]
gi|260409782|gb|EEX03082.1| lipoprotein releasing system, transmembrane protein LolE
[Acinetobacter baumannii ATCC 19606]
Length = 411
Score = 153 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 64/267 (23%), Positives = 125/267 (46%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R N FIS + +S +G+ +GV LI V+SVMNGF ++ RVL
Sbjct: 1 MFKPISLYIGLRYTRARRSNHFISFIALVSMVGLTLGVAVLITVLSVMNGFDRELKNRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ + L D+ + R++ P V V PF Q ++ ++
Sbjct: 61 GMVPQATV-SSTQILTDWPELVKRVENHPHVTGVAPFTQLQGMLTAQGQVAGIMVTGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G++ + G+++GKD+A +LG+ + D + ++ P +P G+
Sbjct: 120 KYEKNVSIIQNHIVAGSLDSLKKGEFGIVLGKDMADSLGLRLNDSVTLVLPEATPSPAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K + V+G+F + D+ + Y++L +A L + G+ + + D A + +
Sbjct: 180 VPRFKRFKVVGIF-SVGAEVDSMVGYIALYDASTLLRLPDGAQGVRLKLDDIFAAPQVAD 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+IV+ L + +W + F+ +
Sbjct: 239 DIVKNLPSNFYATNWTYTHGNLFNAIQ 265
>gi|89902001|ref|YP_524472.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Rhodoferax ferrireducens T118]
gi|89346738|gb|ABD70941.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Rhodoferax ferrireducens T118]
Length = 418
Score = 153 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 76/271 (28%), Positives = 142/271 (52%), Gaps = 5/271 (1%)
Query: 3 IFSRFEVIVAWRYLFSNR---KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E+I+ WRY + R +N FIS S +S +G+ +GV ALI+V+SVMNGF++++
Sbjct: 1 MQLPYELILGWRYTRAGRATRRNGFISFISGVSMLGIALGVAALIIVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQ-QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
R+L + H+ I L D +++ P V+ PF++ QA ++ ++
Sbjct: 61 RMLSVVSHIEIFAPNGAALPDAALTLSQVRAHPQVVGAAPFIATQALLARGEDMKGTMVR 120
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
+ + +S GV++G +LAR+LG+ GDK+ +++P G VT
Sbjct: 121 GIDPAREPEVTDLAIDLKNTGLSRLIPGEFGVVLGGELARSLGVRQGDKVTLVAPSGQVT 180
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
P G+ R K TV+G F +YD+ +V M +++A F LE +G+ V ++D
Sbjct: 181 PAGIVPRLKQMTVVGTFDSGHFEYDSALVLMHIEDAARIFRLEGP-TGVRVKLRDLHQAR 239
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ ++ + L +++ DW ++ + +F+ +
Sbjct: 240 EVAADLAKTLTGELLIRDWTRQNRTWFAAVQ 270
>gi|291613869|ref|YP_003524026.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Sideroxydans lithotrophicus ES-1]
gi|291583981|gb|ADE11639.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Sideroxydans lithotrophicus ES-1]
Length = 414
Score = 153 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 81/268 (30%), Positives = 138/268 (51%), Gaps = 2/268 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+E+ + RY + R+N FIS S IS +G+ +GVMALIVV+SVMNGF++++ R+LG
Sbjct: 1 MQPYELFIGLRYTRAKRRNHFISFISMISMLGIGLGVMALIVVLSVMNGFQKEIRARILG 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ H+ + L D+Q + + P+V P+V GQ VS S ++ + +
Sbjct: 61 VTPHLQVMSDSGQLNDWQHVLGIVARDPEVRAAAPYVDGQGMVSLNESVQGVMVRGILPD 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
++ G + + +++G DLAR LG +GD + +++P G +TP GM
Sbjct: 121 AEQRLTGLGDKMKNGALGDLRAGSFNIVLGVDLARALGAHVGDTVLLITPQGQITPAGML 180
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K + V G+F + YDN + ++L++AQ + + N+VSGI + + D +
Sbjct: 181 PRLKQFHVAGIFEIGMSPYDNALALINLEDAQKLYRMGNSVSGISGSLHNLDLAPQVAYK 240
Query: 244 IVRILGNGVVVIDWQQRYQIFFS--CYE 269
+ L DW ++ +FS E
Sbjct: 241 LEDKLPKDTYATDWTRQNANYFSVVAME 268
>gi|119897800|ref|YP_933013.1| putative lipoprotein transporter, permease [Azoarcus sp. BH72]
gi|119670213|emb|CAL94126.1| putative lipoprotein transporter, permease protein [Azoarcus sp.
BH72]
Length = 418
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 79/267 (29%), Positives = 137/267 (51%), Gaps = 5/267 (1%)
Query: 7 FEVIVAWRYLFSNRK----NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+E++V RY S ++ N FIS S +S +G+ +GV ALIVV+SVMNGF+E++ R+L
Sbjct: 3 YELLVGLRYTRSRKRAQGRNRFISFISLVSMLGIALGVAALIVVLSVMNGFQEELRTRIL 62
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ HV++Q L +Q +A P V PFV Q +S ++ I
Sbjct: 63 GVASHVLVQGVEGELASWQQVAEDAARHPAVKAAAPFVQEQGMLSFDEVVRGTLVRGVIP 122
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
++ G + G+++G+DLA +L + +GDK+ +++P G VTP +
Sbjct: 123 ATEDKVADFGRYMKAGALEALAPGRFGIVLGRDLALSLRVQLGDKVTLIAPQGLVTPAAV 182
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K + V+G+F +YD+G+ + + +AQ + + +AV+G+ + + D A +
Sbjct: 183 LPRVKQFEVVGIFEAGMYEYDSGLALVHIADAQALYRMGDAVTGVRLKLDDLFAAPRVAR 242
Query: 243 NIVRILG-NGVVVIDWQQRYQIFFSCY 268
+ +L V DW + + FF
Sbjct: 243 ELAGMLEAPNAFVTDWTRSHANFFRAV 269
>gi|78356413|ref|YP_387862.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Desulfovibrio desulfuricans subsp. desulfuricans str.
G20]
gi|78218818|gb|ABB38167.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Desulfovibrio desulfuricans subsp. desulfuricans str.
G20]
Length = 408
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 84/268 (31%), Positives = 140/268 (52%), Gaps = 3/268 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
RFE+ VA RYLF+ RK FIS+ S IS +GV +GV +LIVV+ VMNGF DM +++LG+
Sbjct: 1 MRFELFVALRYLFARRKQTFISVISVISVLGVALGVASLIVVLGVMNGFTVDMREKILGV 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N HV+ + Y + + + +P V PF+ + +S VL S
Sbjct: 61 NAHVITLAAGGGISGYPELVRKAETVPGVKGATPFIYSEVMLSTRYGVKGVVLRGVDPVS 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDR-GKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ L + G++++ G++IGK+LA+ LGI++G ++N+LSP G+ T G
Sbjct: 121 APAVLGIAGRMVDGSLADLERSGAPGLVIGKELAKRLGITVGSRVNLLSPSGEKTSAGFT 180
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHE 242
R S+ + G+F +YD+ + ++SL A+ + VSG+E+ V D + +
Sbjct: 181 PRILSFKIAGIFSTGMFEYDSSLGFVSLDAARDLLGMPAGTVSGLEIVVDDIYRADTVAQ 240
Query: 243 NIVRIL-GNGVVVIDWQQRYQIFFSCYE 269
+ + L G +W + F+ +
Sbjct: 241 AVTQALGGYPFYSRNWMEMNANLFAALK 268
>gi|239501007|ref|ZP_04660317.1| ABC-type transport system [Acinetobacter baumannii AB900]
gi|294836597|ref|ZP_06781280.1| ABC-type transport system [Acinetobacter sp. 6013113]
gi|294840709|ref|ZP_06785392.1| ABC-type transport system [Acinetobacter sp. 6014059]
gi|294860832|ref|ZP_06798601.1| ABC-type transport system [Acinetobacter sp. 6013150]
gi|301346981|ref|ZP_07227722.1| ABC-type transport system [Acinetobacter baumannii AB056]
gi|301510507|ref|ZP_07235744.1| ABC-type transport system [Acinetobacter baumannii AB058]
gi|301597094|ref|ZP_07242102.1| ABC-type transport system [Acinetobacter baumannii AB059]
Length = 426
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 64/267 (23%), Positives = 125/267 (46%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R N FIS + +S +G+ +GV LI V+SVMNGF ++ RVL
Sbjct: 16 MFKPISLYIGLRYTRARRSNHFISFIALVSMVGLTLGVAVLITVLSVMNGFDRELKNRVL 75
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ + L D+ + R++ P V V PF Q ++ ++
Sbjct: 76 GMVPQATV-SSTQILTDWPELVKRVENHPHVTGVAPFTQLQGMLTAQGQVAGIMVTGIDP 134
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G++ + G+++GKD+A +LG+ + D + ++ P +P G+
Sbjct: 135 KYEKNVSIIQNHIVAGSLDSLKKGEFGIVLGKDMADSLGLRLNDSVTLVLPEATPSPAGV 194
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K + V+G+F + D+ + Y++L +A L + G+ + + D A + +
Sbjct: 195 VPRFKRFKVVGIF-SVGAEVDSMVGYIALYDASTLLRLPDGAQGVRLKLDDIFAAPQVAD 253
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+IV+ L + +W + F+ +
Sbjct: 254 DIVKNLPSNFYATNWTYTHGNLFNAIQ 280
>gi|121606146|ref|YP_983475.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Polaromonas naphthalenivorans CJ2]
gi|120595115|gb|ABM38554.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Polaromonas naphthalenivorans CJ2]
Length = 418
Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats.
Identities = 76/271 (28%), Positives = 136/271 (50%), Gaps = 5/271 (1%)
Query: 3 IFSRFEVIVAWRYLFSNR---KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E+I+ WRY + R +N FIS S +S +G+ +GV ALI+V+SVMNGF++++
Sbjct: 1 MQIPYELILGWRYTRAGRATRRNGFISFISGVSMLGIALGVAALIIVLSVMNGFQKEVRD 60
Query: 60 RVLGINGH-VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
R+LG+ H V L D Q + P+V+ F++ QA ++ ++
Sbjct: 61 RMLGVISHIEVFAPGGGALADPQKTLAEIRANPNVVGAATFIAAQALLARGEDMKGTMVR 120
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
+ + + GV++G +LAR +G+ GD + +++P G VT
Sbjct: 121 GIDPALEGQVTDLAVELEKTSFPKLVSGQFGVVLGGELARAMGVREGDTVTLIAPSGQVT 180
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
P G+ R K+ TV+G F +YD+ +V M +A F LE +GI + +KD
Sbjct: 181 PAGVVPRLKTMTVVGTFDSGHFEYDSALVMMHQDDAAKIFRLEGP-TGIRIKLKDLHQAR 239
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + L +++ DW ++ + +F+ E
Sbjct: 240 QVALELSQTLSGDLLIRDWTRQNKTWFAAVE 270
>gi|149378068|ref|ZP_01895790.1| ABC-type transport system, involved in lipoprotein release,
permease component [Marinobacter algicola DG893]
gi|149357637|gb|EDM46137.1| ABC-type transport system, involved in lipoprotein release,
permease component [Marinobacter algicola DG893]
Length = 413
Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats.
Identities = 78/266 (29%), Positives = 126/266 (47%), Gaps = 2/266 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + V RY + R+N FIS S S IG+M+GV LI+V+SVMNGF ++ +R+L
Sbjct: 1 MFRPLSLYVGLRYTAAKRRNHFISFISLTSMIGLMLGVAVLIIVLSVMNGFDRELKQRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H VIQ L D+Q + ++ P VI PF+ GQ V+G +L +
Sbjct: 61 GMVPHAVIQGNP-DLDDWQEVDREVEKHPSVIAAAPFIQGQGMVTGGGDVRGVMLNGVLP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S G + + G+IIG+ +A +L + +GD++ ++ P VTP G+
Sbjct: 120 EQERSVSIIENHMIEGGLDDLKSGEFGIIIGRQMAASLRLQLGDRVTVVLPEASVTPAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV G+F + D + + +A + G+ + V D K E
Sbjct: 180 LPRLKRFTVKGVF-SVGAELDGNYTLIHMDDASKLIRTDGKAQGVRLLVDDLFQAPKVAE 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCY 268
+ R L + DW + + F
Sbjct: 239 EVARQLSGRHYISDWTRTHGNLFQAI 264
>gi|221068827|ref|ZP_03544932.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Comamonas testosteroni KF-1]
gi|220713850|gb|EED69218.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Comamonas testosteroni KF-1]
Length = 417
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 78/270 (28%), Positives = 130/270 (48%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNR---KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E+ V WRY + R +N FIS S +S +G+ +GV ALI+V+SVMNGF++++
Sbjct: 1 MQFPYELAVGWRYTRAGRATRRNGFISFISGVSMLGIALGVAALIIVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV I + R + + G LVR
Sbjct: 61 RMLSVVSHVEIYAPQGAPLPDVVRTMREARANPDVVGAAPFVAAQALLARGEDMKGALVR 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
GI + + + + + V++G +LAR+LG+S GD I +++P G VTP
Sbjct: 121 GIDPAREGEVTDLAATSGEVLKRLVPGEFKVVLGIELARSLGVSEGDVITLIAPSGQVTP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
G+ R K TV G F +YD+ +V M ++AQ F LE +GI + +KD +
Sbjct: 181 AGVLPRMKQMTVAGTFDSGHYEYDSALVMMHYEDAQRIFRLEGP-TGIRLKLKDLHEAPR 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L + + + DW Q+ + +F+ +
Sbjct: 240 VAHELADTLTDRLFIRDWTQQNKTWFAAVQ 269
>gi|319786915|ref|YP_004146390.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Pseudoxanthomonas suwonensis 11-1]
gi|317465427|gb|ADV27159.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Pseudoxanthomonas suwonensis 11-1]
Length = 413
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 66/267 (24%), Positives = 121/267 (45%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RYL + R+NAFIS S S IG+ +GV LI M+VM+GF++++ R+L
Sbjct: 1 MFRPVPVAIGLRYLRAKRRNAFISFISLASIIGIALGVTVLITTMAVMSGFQKEIRDRLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H + P+ ++Q + P V P+V +A +SG + V +
Sbjct: 61 QFAAHATVSASGEPMREWQQALDVASRDPRVAGAAPYVETEALLSGPRKQPAMVRGVTPA 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
D + G + +++G++LA LG+ +GD + ++ P +PMG
Sbjct: 121 LEDTVS-EIGHKLKSGEEDSLAPGSYNILLGQELALWLGVEVGDPVLVMLPEFQGSPMGA 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K + V G+F + D G+ + +++ Q + + V+G+ + + D +
Sbjct: 180 MPRYKRFIVSGIFEAGHNEIDRGLAVVHMEDLQRVLRM-DGVTGVRLKLHDLNQSYAVAR 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ L V DW Q + +
Sbjct: 239 DLALQLPGFYRVSDWMQENANLYHSLK 265
>gi|262375598|ref|ZP_06068831.1| lipoprotein releasing system, transmembrane protein LolE
[Acinetobacter lwoffii SH145]
gi|262309852|gb|EEY90982.1| lipoprotein releasing system, transmembrane protein LolE
[Acinetobacter lwoffii SH145]
Length = 413
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 65/269 (24%), Positives = 119/269 (44%), Gaps = 2/269 (0%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M +F + + +Y + R N FIS + +S IG+ +GV LI V+SVMNGF ++ R
Sbjct: 1 MVMFKPISLYIGLKYTRARRSNHFISFIALVSMIGLTLGVAVLITVLSVMNGFDRELKNR 60
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
VLG+ + L ++ +A +++ V V PF Q ++ ++
Sbjct: 61 VLGMIPQATV-SSTQILTNWPELAKQIEQHEHVQGVAPFTQLQGMLTAQGQVAGIMVSGI 119
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ GN+ + G+++GK + +G+ + D I ++ P +P
Sbjct: 120 EPEYEKKVSIIQNHMVEGNIDSLKKGEFGIVLGKQMTDAMGVGLNDNITLVLPEATPSPA 179
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G+ R K + V+G+F + D+ M Y++L +A L + G+ + + D +
Sbjct: 180 GVVPRFKRFKVVGIF-SIGAEVDSMMGYIALNDASTLLRLPDGAQGVRMKLDDIFLAPQV 238
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ IVR L DW + FS +
Sbjct: 239 SQEIVRDLPANFYASDWTYTHGNLFSAIQ 267
>gi|94267599|ref|ZP_01290934.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[delta proteobacterium MLMS-1]
gi|93451928|gb|EAT02650.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[delta proteobacterium MLMS-1]
Length = 410
Score = 152 bits (383), Expect = 5e-35, Method: Composition-based stats.
Identities = 88/270 (32%), Positives = 147/270 (54%), Gaps = 6/270 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F V+ RYL + R FIS+ S IS GVM+GV ALIVV++VM GF + ++LGI
Sbjct: 1 MSFSWFVSRRYLKAKRHRGFISLISLISVAGVMVGVAALIVVLAVMTGFTAEFRDKILGI 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N H+V+Q+ ++D++ A R+ IP V V P++ GQ ++G G ++ +
Sbjct: 61 NSHIVVQKSGAEMLDHRQPAARIAEIPGVDGVTPYIYGQGMITGGVGGTGAIIRGIEPET 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRG-----KGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
LQ G +++ GVI+G+DLA LG+++G+++ +LS G +TP
Sbjct: 121 VTEVLQLDDYLEAGELTDLAVPPGSRRAPGVILGRDLAEQLGVTVGERVKLLSASGPLTP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIE 238
MG+ + K+ V+G+F +YD+ + Y+ L A+ + +L ++ V G+EV V + + +
Sbjct: 181 MGVMPKIKTCLVVGIFSSGMYEYDSSLAYLDLATARDFMDLGSSAVHGLEVRVANINRAD 240
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ I + LG G DW ++ FS
Sbjct: 241 RIALQINQELGPGYQARDWMNMHRNIFSAL 270
>gi|148265267|ref|YP_001231973.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Geobacter uraniireducens Rf4]
gi|146398767|gb|ABQ27400.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Geobacter uraniireducens Rf4]
Length = 424
Score = 152 bits (383), Expect = 5e-35, Method: Composition-based stats.
Identities = 86/277 (31%), Positives = 144/277 (51%), Gaps = 11/277 (3%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
FE+ + RYL + RK+ FIS+ + IS GV +GVMALI+V++VM GF ED+ ++LG
Sbjct: 1 MPFELFIGLRYLKAKRKSTFISLITLISVAGVALGVMALIIVLAVMTGFEEDLKDKILGT 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N H+V+ + + DY + RL + V+ PF+ Q ++ + VL + S
Sbjct: 61 NAHIVVLKSSDGIEDYPRLTERLMGLKGVVAATPFIYSQVMLTTGKNVSGVVLRGIDTKS 120
Query: 125 DFSYLQNSFSRFYG-----------NVSNDFDRGKGVIIGKDLARNLGISIGDKINILSP 173
D + G +++ GV+IGK+LA+NL + +GD +N++SP
Sbjct: 121 DAQVTNLHKAVVEGKLADLDRPAPLPLNSSEAPSPGVVIGKELAKNLNLFLGDTVNVVSP 180
Query: 174 YGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKD 233
G++TP+GM + K + V+G+F +YD+ + Y+ L EAQ + + AV+GI++ V+D
Sbjct: 181 MGNITPLGMMPKMKRFRVVGIFNTGMYEYDSTLAYVGLDEAQAFLGMGKAVTGIQLKVED 240
Query: 234 PDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
I +G DW Q + ++
Sbjct: 241 VYKTGMLVRRINSEIGYPYFARDWMQMNKNILFALKT 277
>gi|298486426|ref|ZP_07004487.1| Lipoprotein releasing system transmembrane protein lolC
[Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|298159054|gb|EFI00114.1| Lipoprotein releasing system transmembrane protein lolC
[Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
Length = 378
Score = 152 bits (383), Expect = 5e-35, Method: Composition-based stats.
Identities = 73/267 (27%), Positives = 124/267 (46%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+ +FIS S S IG+ +GV+A+IVV+SVMNGF+ +M R+L
Sbjct: 1 MFRPLPIFIGMRYTRAKRRKSFISFISMTSMIGLALGVLAMIVVLSVMNGFQREMSSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H VI P+ D++ +A+ P+V +PF + +S S +
Sbjct: 61 GMVPHAVI-AGATPVDDWKPLADAALKNPEVTAAVPFTDMEGMLSYKGSMQPIQISGVDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G++ + GV++G AR +SIGDK+ ++ P P G+
Sbjct: 120 ALEHEVSIVTQHITRGSLEDLKPGEFGVVLGDITARRFRLSIGDKLTLIVPEVSSAPGGI 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + TV+G+F++ + + AQ+ N V G+ + +KD +
Sbjct: 180 TPRLQRLTVVGIFKVGAELDGSMGLINIADAAQMQRWQPNQVQGVRLALKDLYKAPQVST 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I LG+G DW FS +
Sbjct: 240 AIAAGLGDGYRADDWTHTQGSLFSAMK 266
>gi|307544566|ref|YP_003897045.1| ABC lipoprotein-releasing system transmembrane protein [Halomonas
elongata DSM 2581]
gi|307216590|emb|CBV41860.1| ABC-type lipoprotein-releasing system transmembrane protein
[Halomonas elongata DSM 2581]
Length = 413
Score = 152 bits (383), Expect = 5e-35, Method: Composition-based stats.
Identities = 72/267 (26%), Positives = 127/267 (47%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ R +++ RY+ + R+N FIS S S +G+ +GV LI+V+SVMNGF ++ R+L
Sbjct: 1 MLDRLPLLIGLRYVRAKRRNHFISFISLTSMLGLTLGVAVLILVLSVMNGFDRELRTRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I++ + D+Q +A RL VI P++ Q S ++
Sbjct: 61 GMVPHTQIEKPS-GMTDWQSLAERLTQREHVIGAAPYIEQQGMFSVGGRNHGAMVNGIEP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G++ + V++G LAR LG+ +GD + +L P +TP G+
Sbjct: 120 DWERRVSIIDEHMSRGSLDDLVPGEWNVVLGSILARQLGVGVGDSVTLLVPEASITPAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV G+F D D + Y ++++ Q + + V G+ + + D +
Sbjct: 180 FPRLKRFTVSGIF-SVGADLDANLAYANIEDMQTLARMGDDVGGLRLELDDLFKAGSVTQ 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+I+ LG G +DW F +
Sbjct: 239 SIIDDLGAGYRGLDWTYTRGNLFQAIQ 265
>gi|152981241|ref|YP_001352955.1| ABC-type transport system, involved in lipoprotein release,
permease component [Janthinobacterium sp. Marseille]
gi|151281318|gb|ABR89728.1| ABC-type transport system, involved in lipoprotein release,
permease component [Janthinobacterium sp. Marseille]
Length = 421
Score = 152 bits (382), Expect = 6e-35, Method: Composition-based stats.
Identities = 76/275 (27%), Positives = 144/275 (52%), Gaps = 6/275 (2%)
Query: 1 MSIFS--RFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFRE 55
MSI FE +V RY + R+ N+FIS S IS G+ +GV ALI+V+SVMNGF++
Sbjct: 1 MSIIKNLSFEWLVGIRYTRAGRRSGRNSFISFISLISMAGIALGVAALIIVLSVMNGFQK 60
Query: 56 DMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSG 115
++ R+L + H+ I + L ++Q A +V P+V QA ++ +
Sbjct: 61 EVRDRMLSVLSHIEIFEPQGALPNWQETAREAFTNKEVRGAAPYVDAQAMMTRDDTLRGV 120
Query: 116 VLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYG 175
+ + + + G++ N +++G +LAR +G +GDK+ +++P G
Sbjct: 121 AVRGVLPAEEPKVSDVASQVRQGSLDNLRPGEFNIVLGNELARGMGAQLGDKVTMIAPQG 180
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD 235
VTP G+ R K +TV+G+F +YD+ + ++ + +A F L A SG+ + + D
Sbjct: 181 QVTPAGVIPRLKQFTVVGIFDSGHFEYDSTLAFIHINDAMTMFKLP-APSGLRLKIADMQ 239
Query: 236 AIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ ++ +++ V++ DW ++ + +F+ ++
Sbjct: 240 RAPQVAMDLTQVISGNVLIRDWSRQNRNWFAAVQT 274
>gi|94270668|ref|ZP_01291796.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[delta proteobacterium MLMS-1]
gi|93450712|gb|EAT01790.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[delta proteobacterium MLMS-1]
Length = 410
Score = 152 bits (382), Expect = 6e-35, Method: Composition-based stats.
Identities = 88/270 (32%), Positives = 147/270 (54%), Gaps = 6/270 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F V+ RYL + R FIS+ S IS GVM+GV ALIVV++VM GF + ++LGI
Sbjct: 1 MSFPWFVSRRYLKAKRHRGFISLISLISVAGVMVGVAALIVVLAVMTGFTAEFRDKILGI 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N H+V+Q+ ++D++ A R+ IP V V P++ GQ ++G G ++ +
Sbjct: 61 NSHIVVQKSGAEMLDHRQPAARIAEIPGVDGVTPYIYGQGMITGGVGGTGAIIRGIEPAT 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRG-----KGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
LQ G +++ GVI+G+DLA LG+++G+++ +LS G +TP
Sbjct: 121 VTEVLQLDDYLEAGELTDLAVPPGSRRAPGVILGRDLAEQLGVTVGERVKLLSASGPLTP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIE 238
MG+ + K+ V+G+F +YD+ + Y+ L A+ + +L ++ V G+EV V + + +
Sbjct: 181 MGVMPKIKTCLVVGIFSSGMYEYDSSLAYLDLATARDFMDLGSSAVHGLEVRVANINRAD 240
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ I + LG G DW ++ FS
Sbjct: 241 RIALQINQELGPGYQARDWMNMHRNIFSAL 270
>gi|83645163|ref|YP_433598.1| lipoprotein release ABC transporter permease [Hahella chejuensis
KCTC 2396]
gi|83633206|gb|ABC29173.1| ABC-type transport system, involved in lipoprotein release,
permease component [Hahella chejuensis KCTC 2396]
Length = 413
Score = 152 bits (382), Expect = 6e-35, Method: Composition-based stats.
Identities = 71/267 (26%), Positives = 127/267 (47%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY + R N FIS S S IG+++GV+ LI VMSVMNGF ++ +R+L
Sbjct: 1 MYKPLSLFIGLRYTSAKRDNHFISFISLTSMIGLILGVLVLITVMSVMNGFDRELRQRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H VI+ P+ ++ + P V V PFV Q + + ++
Sbjct: 61 GMVPHAVIKSHD-PMGSWREVKEFALQHPQVEGVAPFVYAQGMATAAGNVHGIMINGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
++ G++ + G+++G LA + +GDKI ++ P VTP G+
Sbjct: 120 EAEKGVSIVQNHLISGSLDDLKPGEFGIVLGDILASYMRARVGDKITVILPEASVTPAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV G+F + D+ + +++++A L ++V G+ + + + K
Sbjct: 180 FPRMKRFTVKGIF-SVGAELDSTLAIINIEDAARIKRLGDSVEGVRLKLTNLFDASKVSR 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
IV LG+G DW + + F +
Sbjct: 239 TIVAELGSGYYASDWTRTHGNLFQAIQ 265
>gi|124267933|ref|YP_001021937.1| putative lipoprotein releasing system transmembrane [Methylibium
petroleiphilum PM1]
gi|124260708|gb|ABM95702.1| putative lipoprotein releasing system transmembrane [Methylibium
petroleiphilum PM1]
Length = 418
Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats.
Identities = 76/271 (28%), Positives = 138/271 (50%), Gaps = 5/271 (1%)
Query: 3 IFSRFEVIVAWRYLF---SNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E+ + WRY S R+N FIS S +S +G+ +GV ALI+V+SVMNGF++++
Sbjct: 1 MHWPYELTIGWRYTRAGRSGRRNGFISFISGVSMLGIALGVAALIIVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPL-VDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
R+L + HV I + D++ A P+V+ PF++ QA ++ V+
Sbjct: 61 RMLSVIAHVEIFEAGGNALPDWRATAAAARGNPEVLGAAPFIATQALIARGEDMRGAVVR 120
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
+ + + G + G+++G +LAR LG+ +GD + +++P G VT
Sbjct: 121 GIDPAEEANVTPLAAQSRDGAFAGLKPGAWGIVLGGELARTLGVKVGDPVTLVTPNGQVT 180
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
P G+ R K TV+G F +YD+G+ M + +A F ++ +G+++ ++D
Sbjct: 181 PAGVVPRLKQMTVVGTFNAGHYEYDSGLALMHIDDAARLFRVDGP-TGVQLRLRDQQQAR 239
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + LG V V DW + + +F +
Sbjct: 240 RVGFELAEQLGPTVSVRDWTRTNRNWFDAVQ 270
>gi|163868356|ref|YP_001609565.1| ABC transporter, permease protein [Bartonella tribocorum CIP
105476]
gi|161018012|emb|CAK01570.1| ABC transporter, permease protein [Bartonella tribocorum CIP
105476]
Length = 422
Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats.
Identities = 106/266 (39%), Positives = 164/266 (61%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS +E ++A+RY+ N+K+ S+ S IS IG+M+GV AL+VVM+VMNGFR +++ R+LG
Sbjct: 9 FSSYEWMIAFRYMIPNKKHVVASVISIISLIGIMLGVFALVVVMAVMNGFRTELLNRILG 68
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGH+++Q DY+ + + L+ V LP + GQA V G GGSG LVRG+
Sbjct: 69 MNGHLIVQTVDSGFSDYKTLISSLEATNGVKFALPVIEGQALVQGEVQGGSGALVRGMRK 128
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D L+ + FD +GV IG LA LG+++G + I++P GD TP G+
Sbjct: 129 QDLEKLKTVSQNIKLGSISRFDEEEGVAIGSGLAEKLGLTVGRDLRIITPDGDETPFGVT 188
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K+Y V+ +F + +YD+ V+M L EAQ++FNL + V +E+F+ DPDA+++
Sbjct: 189 PRVKAYKVVAIFEVGMSEYDSIFVFMPLHEAQMFFNLGDKVQSLELFLNDPDAVDQIKPV 248
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V +IDW+ R Q FFS +
Sbjct: 249 VEKAVDQQVYLIDWRTRNQAFFSALQ 274
>gi|73540778|ref|YP_295298.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Ralstonia eutropha JMP134]
gi|72118191|gb|AAZ60454.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Ralstonia eutropha JMP134]
Length = 416
Score = 151 bits (381), Expect = 8e-35, Method: Composition-based stats.
Identities = 69/271 (25%), Positives = 140/271 (51%), Gaps = 5/271 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY ++++ N FIS S IS +G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MKFPYEWQIGWRYTRASKRASRNTFISFISMISMLGIALGVAALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + H+ + L D+Q A +VI P+V+ QA ++ + +L
Sbjct: 61 RMLSVLSHIEVIGPS-ALPDWQRTAAEAMRNKEVIGAAPYVAAQAMLTREDAVRGVLLRG 119
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ G++ + G+ +G +LA +G+ +GDKI +L+P G +TP
Sbjct: 120 VDPAEEPKVSDIGKQFKAGHMESLQPGEFGIALGNELANAMGVQVGDKITLLAPQGTITP 179
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
G+ R K +TV+G+F ++D+ + +++++A+ F + +G+ + + D +
Sbjct: 180 AGVLPRLKQFTVVGVFSSGHFEFDSALALVNIRDAETLFRMTGP-TGVRLKLADMQRAPQ 238
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ + + + DW ++ + +F+ ++
Sbjct: 239 VANELAGTMSGELYLRDWSKQNRNWFAAVQT 269
>gi|262368626|ref|ZP_06061955.1| outer membrane lipoproteins ABC transporter membrane protein
[Acinetobacter johnsonii SH046]
gi|262316304|gb|EEY97342.1| outer membrane lipoproteins ABC transporter membrane protein
[Acinetobacter johnsonii SH046]
Length = 411
Score = 151 bits (380), Expect = 9e-35, Method: Composition-based stats.
Identities = 67/267 (25%), Positives = 119/267 (44%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R N FIS + +S IG+ +GV LI V+SVMNGF ++ RVL
Sbjct: 1 MFKPISLYIGLRYTRARRSNHFISFIALVSMIGLTLGVAVLITVLSVMNGFDRELKTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ + L D+ +A +++ V V PF Q ++ ++
Sbjct: 61 GMIPQATV-SSTQILTDWPELAKKIETKEHVTGVAPFTQLQGMLTAQGQVAGIMVTGIEP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G + N G+++GK + LG+ + D + ++ P +P G+
Sbjct: 120 QYEKKVSIIQDHMVEGGIDNLKKGEFGIVLGKQMTDALGLGLNDSVTLVLPEATPSPAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K + ++G+F + D+ M Y++L +A L + GI + + D A K +
Sbjct: 180 VPRFKRFKIVGIF-SIGAEVDSMMGYIALNDASTLLRLPDGAQGIRLKLDDIFAAPKVAD 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
IV L +G +W + FS +
Sbjct: 239 EIVMDLPSGFYASNWTYTHGNLFSAIQ 265
>gi|304391640|ref|ZP_07373582.1| lipoprotein releasing system transmembrane protein [Ahrensia sp.
R2A130]
gi|303295869|gb|EFL90227.1| lipoprotein releasing system transmembrane protein [Ahrensia sp.
R2A130]
Length = 440
Score = 151 bits (380), Expect = 9e-35, Method: Composition-based stats.
Identities = 112/266 (42%), Positives = 152/266 (57%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FSRFE ++A RYL S RK FIS+ S ISF+G+M+GV LI+VM+VMNGFR +++ R+LG
Sbjct: 28 FSRFEWMLARRYLGSRRKETFISVISIISFVGIMLGVATLIIVMAVMNGFRTELLDRILG 87
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
INGH+++ Y L DY +A+RL+ + VI P + G+ SG G +
Sbjct: 88 INGHLIVAPTEYALTDYDAVASRLEAVDGVIYAFPLIEGEVLASGGKGGSGARVRGMREG 147
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
L + S + FD G GV IG +ARNL + +GD I +++P G+ T G+
Sbjct: 148 D-LKRLPSVGSNIVEGTLDGFDAGDGVAIGAVMARNLNLYLGDSITLVTPDGNKTAFGVT 206
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R KSY V +F M +YDN V+M L EAQLYFN E V IE F+ D D +EK
Sbjct: 207 PRVKSYPVTAIFEMGMSEYDNIFVFMPLLEAQLYFNKEQVVDVIETFITDADDVEKMRGP 266
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + V DW+QR FFS E
Sbjct: 267 MEAGAERPISVSDWRQRNASFFSALE 292
>gi|330994072|ref|ZP_08318002.1| Lipoprotein-releasing system transmembrane protein lolC
[Gluconacetobacter sp. SXCC-1]
gi|329759018|gb|EGG75532.1| Lipoprotein-releasing system transmembrane protein lolC
[Gluconacetobacter sp. SXCC-1]
Length = 414
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 83/267 (31%), Positives = 141/267 (52%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F FE +VA RYL + R F+S+ + S +G+ +GV LI+VMSVMNGF+ D++ R+L
Sbjct: 1 MFGPFERMVAGRYLHARRGERFVSVIAIFSLVGIALGVATLIIVMSVMNGFKADLLGRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+NG + + + DY +A R+ +P V+ P V Q ++ + +G LVRG++
Sbjct: 61 GLNGDLSVYGLTRTITDYDDVAGRVRRVPGVVSAAPLVESQVLLNSGTYN-AGGLVRGMT 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+D L +DF +++G LA G+++G ++ ++SP G T G
Sbjct: 120 RADLLGLHEVSDNLVAGSVDDFGADDTIVVGTTLAERAGLTVGGRLTLVSPQGAATAFGT 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R ++Y V+ +F DY+ V++ L AQ+YF L V+ ++V +D + +
Sbjct: 180 MPRVRAYRVVAIFDAGVNDYNASYVFLPLHAAQVYFQLPGQVTQVQVMTRDAENVAPIRA 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I + + V V+DW Q FF +
Sbjct: 240 AIEKAMNGEVRVMDWTQSNNAFFGAVQ 266
>gi|198282780|ref|YP_002219101.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218667228|ref|YP_002424977.1| lipoprotein releasing system transmembrane protein LolC
[Acidithiobacillus ferrooxidans ATCC 23270]
gi|198247301|gb|ACH82894.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218519441|gb|ACK80027.1| lipoprotein releasing system transmembrane protein LolC
[Acidithiobacillus ferrooxidans ATCC 23270]
Length = 414
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 83/265 (31%), Positives = 141/265 (53%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+E+ + RY + R+N FIS + + +G++IGV ALI VM+VMNGF + R+L
Sbjct: 1 MRFYELWIGLRYTRAKRRNHFISFITGTAIMGMVIGVAALIAVMAVMNGFDHTLRSRILA 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ V+IQ P++D+ RL +P V V P+V QA +S V+
Sbjct: 61 VTSDVIIQGNGVPVLDWPTAVKRLSTVPGVTGVAPYVQAQAMLSHEGLVSGAVIEGIDPA 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + G + + +++G+ LAR LG+++GDKI ++SP G VTP+G+
Sbjct: 121 LENRVNKLNQDMKMGELQSLQTHPWSIVLGRALARQLGVTVGDKITLISPQGGVTPLGVT 180
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ +TV+G+F + YD+GM Y++L +AQ + L V+G+ + +KDP +
Sbjct: 181 PALRQFTVVGLFSVGIYAYDSGMAYINLGDAQRLYGLNQGVTGLRMQIKDPFTAPAFAAH 240
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCY 268
+ + LG + DW Q ++ FF
Sbjct: 241 LQQQLGAAFYIQDWTQTHENFFKAL 265
>gi|160872150|ref|ZP_02062282.1| lipoprotein-releasing system transmembrane protein LolC
[Rickettsiella grylli]
gi|159120949|gb|EDP46287.1| lipoprotein-releasing system transmembrane protein LolC
[Rickettsiella grylli]
Length = 417
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 67/267 (25%), Positives = 120/267 (44%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + ++N FIS S S IG+ +GVM LI V+SVMNGF + + R+
Sbjct: 1 MFRPIALYIGLRYTRAKKRNHFISFISLTSMIGIALGVMVLITVLSVMNGFDDAISHRIF 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ V I + R + + +++ G+
Sbjct: 61 NMATQVTITTTQGEPITQLTSLIRKISHQPHVIASAPYVSGQGMLVDQGQSHPIMITGVL 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + N +++G++LA LGI IGDK+NI++P +TP+G+
Sbjct: 121 PHLEKNVSEIPHKIIEGHFNLEPGHYNIVLGEELALMLGIQIGDKVNIITPRVSLTPVGL 180
Query: 183 GIRSKSYTVLGMFRM-RFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
R K++TV G+FR+ R ++ M Y++L++AQ F L V+G+ + + D A +
Sbjct: 181 IPRFKTFTVSGIFRVGRSFGFETSMAYIALKDAQTLFQLNQGVTGLRLKLDDLFAAPQVS 240
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ ++L +DW +
Sbjct: 241 SALNQLLPPTYTALDWTHTFGSLIYAI 267
>gi|328954382|ref|YP_004371716.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Desulfobacca acetoxidans DSM 11109]
gi|328454706|gb|AEB10535.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Desulfobacca acetoxidans DSM 11109]
Length = 409
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 87/269 (32%), Positives = 144/269 (53%), Gaps = 4/269 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+FE +VA RYL + R+ FIS+ SFIS GV +GVMAL+VV+ VM GF +D+ +++L +
Sbjct: 1 MQFERLVALRYLKAKRREKFISLISFISIAGVAVGVMALLVVIGVMTGFDQDLKRKILSV 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N HV++ + Y +VDY + +++ +P V PF+ Q SG ++ GV+ S
Sbjct: 61 NAHVILIKPGYSIVDYDALVKKVEAVPGVASAKPFIYTQVMFSGPNNISGGVIRGLDLAS 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGV----IIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ G+ + +G +LA+N+G+ +G +I I+SP G +TPM
Sbjct: 121 IHQGGPAAIEVRDGSFTTLDKVQPAELPSVAVGNELAKNIGVRVGSQIKIISPLGTLTPM 180
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G R K++ V +F ++DN +VY S+ + Q Y L + V+G+E+ V D A +
Sbjct: 181 GRIPRVKNFQVGAIFHSGMFEFDNTLVYASIPQVQEYLGLGDKVTGLEIRVDDIYAADTV 240
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ LG G DW + + F+ +
Sbjct: 241 AAAVQTALGPGYQTRDWMRMNRSLFAALK 269
>gi|91786914|ref|YP_547866.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Polaromonas sp. JS666]
gi|91696139|gb|ABE42968.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Polaromonas sp. JS666]
Length = 418
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 76/271 (28%), Positives = 135/271 (49%), Gaps = 5/271 (1%)
Query: 3 IFSRFEVIVAWRYLFSNR---KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E+I+ WRY + R +N FIS S +S +G+ +GV ALI+V+SVMNGF++++
Sbjct: 1 MQIPYELILGWRYTRAGRATRRNGFISFISGVSMLGIALGVAALIIVLSVMNGFQKEVRD 60
Query: 60 RVLGINGH-VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
R+LG+ H V L D Q + P V+ F++ QA ++ ++
Sbjct: 61 RMLGVISHIEVFAPNGAALPDPQKTLAEIKANPQVVGAATFIAAQALLARGEDMKGTLVR 120
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
+ + G GV++G +LAR++G+ GD + +++P G VT
Sbjct: 121 GIDPALEGQVTDLAVQLKDTAFPKLVSGGFGVVLGGELARSMGVREGDTVTLIAPSGQVT 180
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
P G+ R K TV+G F +YD+ +V + +A F LE +GI + +KD
Sbjct: 181 PAGVVPRLKQMTVVGTFDSGHFEYDSALVMLHQDDAARIFRLEGP-TGIRIKLKDLHQAR 239
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + R L +++ DW ++ + +F+ +
Sbjct: 240 EVALELSRSLTGDLLIRDWTRQNKTWFAAVQ 270
>gi|78223562|ref|YP_385309.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Geobacter metallireducens GS-15]
gi|78194817|gb|ABB32584.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Geobacter metallireducens GS-15]
Length = 423
Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 97/277 (35%), Positives = 150/277 (54%), Gaps = 12/277 (4%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+E+ + RYL + RK+ FISI +FIS GV +GVMALIVV++VM GF ED+ +++LG
Sbjct: 1 MSYELFIGLRYLKAKRKSTFISIITFISTAGVALGVMALIVVLAVMTGFEEDLKEKILGT 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N HVV+ + + DY I RL + V+ PF+ Q +S S SGV++RGI
Sbjct: 61 NAHVVVLKSSGTMEDYPAIMERLKKMKGVVAATPFIYSQVMLSTG-SNVSGVVLRGIDVK 119
Query: 125 DFSYLQNSFSRFYGNVSND-----------FDRGKGVIIGKDLARNLGISIGDKINILSP 173
+ N + D G+IIG++LAR+L I GD +N++SP
Sbjct: 120 TDPLVTNLYRSLVEGKLGDLERSPLPLATPEPPKPGIIIGRELARSLNIYPGDTVNVISP 179
Query: 174 YGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKD 233
G++TP+GM + K + V+G+F +YD+ + Y+ L EAQ + +L +A +GI++ V+D
Sbjct: 180 LGNITPLGMVPKMKQFRVVGLFNTGMFEYDSTLAYVGLSEAQEFLSLGHAATGIQLRVQD 239
Query: 234 PDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ I R LG DW Q + ++
Sbjct: 240 VYRTGELVRKIDRELGFPFHARDWMQMNKNILFALKT 276
>gi|227015814|gb|ACP17911.1| putative LolC/E family lipoprotein releasing system [Pseudomonas
nitroreducens]
Length = 415
Score = 151 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 69/267 (25%), Positives = 119/267 (44%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RY + R+N +IS S S IG+ +GV+A+IVV+SVMNGF+++M R+L
Sbjct: 1 MFRPLSVFIGTRYTRAKRRNHYISFISLTSMIGLALGVLAMIVVLSVMNGFQKEMRSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H V+QQ PL D+Q +A P ++ +P+ +S +
Sbjct: 61 GMVPHAVLQQAGGPLDDWQRVAEVAKKNPQIVGAVPYTEVDGMLSYKGMMQPIEVDGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ +G + + GV+IG+ AR + +GD + ++ P P G+
Sbjct: 121 ALETQVSIIGQHMVHGRLEDLKASEFGVVIGEITARRFHVGVGDSLLLIVPEPSTAPGGI 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + V+G+F++ + A L V + + +KD +
Sbjct: 181 TPRMQRLNVVGIFKVGAELDSTLALIHVDDAASLMRWQPGQVQSVRIALKDLFQAPEVGA 240
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I + LG+G +DW FS +
Sbjct: 241 AIAKQLGDGYRSVDWTHTQGSLFSAMK 267
>gi|240850600|ref|YP_002972000.1| lipoprotein releasing system transmembrane protein LolC [Bartonella
grahamii as4aup]
gi|240267723|gb|ACS51311.1| lipoprotein releasing system transmembrane protein LolC [Bartonella
grahamii as4aup]
Length = 422
Score = 151 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 106/266 (39%), Positives = 163/266 (61%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS +E ++A+RY+ N+K+ S+ S IS IG+M+GV AL+VVM+VMNGFR +++ R+LG
Sbjct: 9 FSSYEWMIAFRYMIPNKKHVVASVISIISLIGIMLGVFALVVVMAVMNGFRTELLNRILG 68
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGH ++Q DY+ + + L+ V LP + GQA V G GGSG LVRG+
Sbjct: 69 MNGHFIVQTVDSGFSDYKTLISSLESTNGVKFALPVIEGQALVQGEVQGGSGALVRGMRK 128
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D L+ + FD +GV IG LA LG+++G I I++P GD TP G+
Sbjct: 129 QDLEKLKTVSQNIKLGSISRFDEEEGVAIGSGLAEKLGLTVGRDIRIITPDGDETPFGVT 188
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K+Y V+ +F + +YD+ ++M L EAQ++FNL + V +E+F+ DPDA+++
Sbjct: 189 PRVKAYKVVAIFEVGMSEYDSIFIFMPLHEAQMFFNLGDKVQSLELFLNDPDAVDQIKPV 248
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V +IDW+ R Q FFS +
Sbjct: 249 VEKTVDQQVYLIDWRTRNQAFFSALQ 274
>gi|224369337|ref|YP_002603501.1| LolC [Desulfobacterium autotrophicum HRM2]
gi|223692054|gb|ACN15337.1| LolC [Desulfobacterium autotrophicum HRM2]
Length = 407
Score = 151 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 77/268 (28%), Positives = 129/268 (48%), Gaps = 3/268 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
E +A RYL + ++ FIS+ + +S GV +GVMAL++V++VM+G + +R+LG+
Sbjct: 1 MPLEFFIAARYLRAKQREGFISLITLLSVAGVTVGVMALVIVIAVMSGAESEFRRRILGV 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
HV++ D R +P V V P V Q + S V+
Sbjct: 61 EPHVLVMNHSGTAYDVNSTIKRAMDVPGVADVSPMVFAQTMIRTSHSLSGAVVRGVDPAV 120
Query: 125 DFSYLQNSFSRFYGN---VSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
S ++ + G+I+GK+LA+NL IS+GDKI ++SP G ++P+G
Sbjct: 121 SLSLVKGFTPEELDRCLARDGNGVVLPGIILGKELAKNLAISVGDKIVLISPGGMISPVG 180
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
K + V G+F +YD+ + Y+ L EAQ + + +S + V+VKD +K
Sbjct: 181 HVPALKRFRVTGIFESGMYEYDSSLAYVHLIEAQKLMGMGDRISALGVWVKDLFKADKVK 240
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+V L DW + + F+ +
Sbjct: 241 TALVAALDYPFYGRDWMEINKSLFAALK 268
>gi|260549325|ref|ZP_05823545.1| ABC-type transport system [Acinetobacter sp. RUH2624]
gi|260407731|gb|EEX01204.1| ABC-type transport system [Acinetobacter sp. RUH2624]
Length = 418
Score = 151 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 64/267 (23%), Positives = 125/267 (46%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R N FIS + +S +G+ +GV LI V+SVMNGF ++ RVL
Sbjct: 8 MFKPISLYIGLRYTRARRSNHFISFIALVSMVGLTLGVAVLITVLSVMNGFDRELKNRVL 67
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ + L D+ + R++ P V V PF Q ++ ++
Sbjct: 68 GMVPQATV-SSTQILTDWPELIKRVENHPHVTGVAPFTQLQGMLTAQGQVAGIMVTGIDP 126
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G++ + G+++GKD+A +LG+ + D + ++ P +P G+
Sbjct: 127 KYEKNVSIIQNHIVAGSLDSLKKGEFGIVLGKDMADSLGLRLNDSVTLVLPEATPSPAGV 186
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K + V+G+F + D+ + Y++L +A L + G+ + + D A + +
Sbjct: 187 VPRFKRFKVVGIF-SVGAEVDSMVGYIALYDASTLLRLPDGAQGVRLKMDDIFAAPQVAD 245
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+IV+ L + +W + F+ +
Sbjct: 246 DIVKNLPSNFYATNWTYTHGNLFNAIQ 272
>gi|49475641|ref|YP_033682.1| lipoprotein releasing system transmembrane protein lolC [Bartonella
henselae str. Houston-1]
gi|49238448|emb|CAF27676.1| Lipoprotein releasing system transmembrane protein lolC [Bartonella
henselae str. Houston-1]
Length = 422
Score = 151 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 105/266 (39%), Positives = 163/266 (61%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS +E ++A+RY+ N+K+ S+ S IS +G+M+GV AL+VVM+VMNGFR +++ R+LG
Sbjct: 9 FSSYEWMIAFRYMIPNKKHVVASVISIISLVGIMLGVFALVVVMAVMNGFRTELLNRILG 68
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGH++IQ DY + ++ + V LP + GQA V G GGSG LVRG+
Sbjct: 69 MNGHLIIQTINSGFSDYNNLIPSIESVNGVKFALPVIEGQALVQGELQGGSGALVRGMRK 128
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D L+ FD+ +GV IG LA LG++IG + I++P GD TP G+
Sbjct: 129 QDLEKLKTVSENIKLGSLAQFDQEEGVAIGISLAEKLGLTIGSDLRIITPDGDETPFGVT 188
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K+Y V+ +F + +YD+ V+M L EAQ +FNL N + +E+F+ DPD++++
Sbjct: 189 PRVKAYKVVAIFEVGMSEYDSIFVFMPLHEAQAFFNLGNKIQSLELFLNDPDSVDRIKPI 248
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ +++ V +IDW+ R Q FFS +
Sbjct: 249 LEKLIDQQVYLIDWRTRNQAFFSALQ 274
>gi|194289277|ref|YP_002005184.1| outer membrane lipoproteins ABC transporter [Cupriavidus
taiwanensis LMG 19424]
gi|193223112|emb|CAQ69117.1| outer membrane lipoproteins ABC transporter, membrane component
[Cupriavidus taiwanensis LMG 19424]
Length = 416
Score = 151 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 71/271 (26%), Positives = 142/271 (52%), Gaps = 5/271 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY ++++ N FIS S IS +G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MKFPYEWQIGWRYTRASKRASRNTFISFISMISMLGIALGVAALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + H+ + L D+Q A +V+ P+V+ QA ++ + +L
Sbjct: 61 RMLSVLAHIEVIGPS-ALPDWQKTAAEALQNKEVVGAAPYVAAQAMLTRDDAVRGVLLRG 119
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + G+++ G+ +G +LA +G+ +GDKI +L+P G +TP
Sbjct: 120 VEPTQEPKVSEIGSQFRAGSMAALVPGSFGIALGNELANAMGVQVGDKITLLAPQGTITP 179
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
G+ R K +TV+G+F ++D+ + ++LQ+A+ F L +G+ + ++D
Sbjct: 180 AGVLPRLKQFTVVGVFSSGHFEFDSALALVNLQDAETLFRLSGP-TGVRLKLQDMQRAPL 238
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ + + + + DW ++ + +F+ ++
Sbjct: 239 VAQELAGTMSGELYLRDWSKQNRNWFAAVQT 269
>gi|46580780|ref|YP_011588.1| lipoprotein releasing system, permease [Desulfovibrio vulgaris str.
Hildenborough]
gi|46450200|gb|AAS96848.1| lipoprotein releasing system, permease protein [Desulfovibrio
vulgaris str. Hildenborough]
gi|311234488|gb|ADP87342.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Desulfovibrio vulgaris RCH1]
Length = 411
Score = 151 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 85/271 (31%), Positives = 131/271 (48%), Gaps = 6/271 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
FE+ VA RYLF+ RK AFIS+ S +S IGV +GV +LIVV+ VMNGF D+ ++LG
Sbjct: 1 MSFELFVAGRYLFARRKQAFISVISAMSIIGVGLGVASLIVVLGVMNGFTTDLRDKILGA 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N HV++ + +K + G G+++RGI
Sbjct: 61 NAHVIVMSSKPAAMRDVGELMGRVQDVRGVKGATPFIYSETMLSTPHGVKGLVLRGIDPQ 120
Query: 125 DFSYLQNSFSRFYGNVSND----FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + SR D D G+IIG++LA LGI+ G ++N+LSP G T
Sbjct: 121 TAPGVLSILSRMTRGGLRDLPAGPDGAHGIIIGQELANRLGITTGSRVNLLSPDGQKTTT 180
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEK 239
G R + + V G+F +YD+ + +++L A+ L VSGIEV V D +
Sbjct: 181 GFAPRIRPFRVAGIFTTGMYEYDSSLGFVTLDAARDILGLPEGQVSGIEVVVDDVYKADV 240
Query: 240 THENIVRIL-GNGVVVIDWQQRYQIFFSCYE 269
E++++ G V +W + F+ +
Sbjct: 241 IGEDVLKASGGYPYYVRNWMEMNANLFAALK 271
>gi|192361053|ref|YP_001982252.1| efflux ABC transporter permease [Cellvibrio japonicus Ueda107]
gi|190687218|gb|ACE84896.1| efflux ABC transporter, permease protein [Cellvibrio japonicus
Ueda107]
Length = 434
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 74/268 (27%), Positives = 134/268 (50%), Gaps = 3/268 (1%)
Query: 2 SIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+ + + + RY + R+N FIS S S IG+ +GVMALI+V+SVMNGF +M +R+
Sbjct: 22 RMLTNIPLYIGLRYTRAKRRNQFISFISAFSLIGMALGVMALIIVLSVMNGFDREMKERI 81
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
L + H ++ QK L D+ +A +++ P V+ P+++ +S + L I
Sbjct: 82 LSVVPHGLVDQKP-LLHDWHLLAEQVEQHPRVVAAAPYLASTVMISYADGVEAVELQGII 140
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ G+++ G+++G+ LA L ++ GDKI I SP ++TP+G
Sbjct: 141 PEEEARVSIVDKRMLVGDMALLQPGEYGIVMGRILASRLALAPGDKIRITSPDINITPLG 200
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
R++ +T++G+F + D+ +V++ L +A+ + G+ V +
Sbjct: 201 AFTRTRHFTLVGVFEVG-ALVDSNLVFIHLDDAKRFLRQPG-AQGLHVKTDNMLDAPLIM 258
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+I + LG+ V V DW Q F +
Sbjct: 259 SDIRQRLGDSVQVKDWSQTQGSLFQAVK 286
>gi|39997368|ref|NP_953319.1| ABC transporter permease [Geobacter sulfurreducens PCA]
gi|39984259|gb|AAR35646.1| ABC transporter, permease protein [Geobacter sulfurreducens PCA]
gi|298506305|gb|ADI85028.1| lipoprotein release ABC transporter, membrane protein [Geobacter
sulfurreducens KN400]
Length = 423
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 93/277 (33%), Positives = 149/277 (53%), Gaps = 12/277 (4%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+E+ + RYL + RK+ FISI +FIS GV +GV+ALIVV++VM GF ED+ +++LG
Sbjct: 1 MPYELFIGLRYLKAKRKSTFISIITFISTAGVALGVLALIVVLAVMTGFEEDLKEKILGT 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N H+V+ + + DY + RL + V V PF+ Q +S SGV++RG+ +
Sbjct: 61 NAHIVVLKSSGGIEDYHAMMERLSAVKGVKAVTPFIYSQVMLSSG-GNVSGVVLRGVDPA 119
Query: 125 DFSYLQNSFSRFYGNVSND-----------FDRGKGVIIGKDLARNLGISIGDKINILSP 173
+ N D G+IIGK+LAR+L + +GD +N++SP
Sbjct: 120 TDPQVTNLSRSLVDGKLTDLTTVPAPLASAEPVRPGIIIGKELARSLNLYVGDTLNVISP 179
Query: 174 YGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKD 233
G++TP+GM + K + V+G+F +YD+ + Y+ L EAQ + ++ AV+GI++ V D
Sbjct: 180 LGNITPLGMVPKMKQFRVVGLFNTGMFEYDSTLAYVGLGEAQEFLSMGKAVTGIQLRVAD 239
Query: 234 PDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ I R LG DW Q + ++
Sbjct: 240 VYHTGEMVREINRDLGFPYYARDWMQMNKNILFALKT 276
>gi|113867193|ref|YP_725682.1| ABC transporter permease [Ralstonia eutropha H16]
gi|113525969|emb|CAJ92314.1| ABC-type transporter, permease component: LPT family [Ralstonia
eutropha H16]
Length = 416
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 68/271 (25%), Positives = 140/271 (51%), Gaps = 5/271 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY ++++ N FIS S IS G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MNFPYEWQIGWRYTRASKRASRNTFISFISMISMFGIALGVAALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + H+ + L D+Q A +V P+V+ QA ++ + +L
Sbjct: 61 RMLSVLAHIEVIGPS-ALPDWQKTAAEALQNKEVTGAAPYVAAQAMLTRDDAVRGVLLRG 119
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + G+++ G G+ +G +LA +G+ +GDK+ +++P G +TP
Sbjct: 120 VEPSQEPKVSDIGSQFRAGSMTALEPGGFGIALGNELANAMGVQVGDKVTLVAPQGTITP 179
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
G+ R K +TV+G+F ++D+ + +++ +A+ F L +G+ + ++D +
Sbjct: 180 AGVLPRLKQFTVVGVFSSGHFEFDSALALVNMHDAETLFRLSGP-TGVRLKLQDMQRAPQ 238
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ + + + DW ++ + +F+ ++
Sbjct: 239 VANELAGTMSGELYLRDWSKQNRNWFAAVQT 269
>gi|222111925|ref|YP_002554189.1| lipoprotein releasing system, transmembrane protein, lolc/e family
[Acidovorax ebreus TPSY]
gi|221731369|gb|ACM34189.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Acidovorax ebreus TPSY]
Length = 417
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 78/271 (28%), Positives = 139/271 (51%), Gaps = 6/271 (2%)
Query: 3 IFSRFEVIVAWRYLFSNR---KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E+ + WRY + R +N FIS S +S +G+ +GV ALI+V+SVMNGF++++
Sbjct: 1 MQIPYELALGWRYTRAGRATRRNGFISFISGVSMLGISLGVAALIIVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPL-VDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
R+L + H+ I D P+V+ PFV+ QA ++ G LV
Sbjct: 61 RMLSVVSHIEIFAPGGAALPDMPRTLAEARANPNVVGAAPFVAAQALLARG-EDMKGALV 119
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
RGI + + + + + + VI+G +LAR LG+ GD + +++P G VT
Sbjct: 120 RGIDPAHEAEVTDLAAENLEGLKALVPGEFRVILGSELARQLGVRAGDAVTLIAPAGQVT 179
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
P G+ R K TV G F +YD+ +V + ++A+ F LE +G+ + +K+
Sbjct: 180 PAGVVPRLKQMTVAGTFNSGHYEYDSALVMLHHEDAERIFRLEGP-TGVRLKLKNLHDAP 238
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + L +++ DW Q+ + +F+ +
Sbjct: 239 EVTQQLAHSLSGNLLIRDWTQQNRTWFAAVQ 269
>gi|121595718|ref|YP_987614.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Acidovorax sp. JS42]
gi|120607798|gb|ABM43538.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Acidovorax sp. JS42]
Length = 417
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 78/271 (28%), Positives = 139/271 (51%), Gaps = 6/271 (2%)
Query: 3 IFSRFEVIVAWRYLFSNR---KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E+ + WRY + R +N FIS S +S +G+ +GV ALI+V+SVMNGF++++
Sbjct: 1 MQIPYELALGWRYTRAGRATRRNGFISFISGVSMLGISLGVAALIIVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPL-VDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
R+L + H+ I D P+V+ PFV+ QA ++ G LV
Sbjct: 61 RMLSVVSHIEIFAPGGAALPDMPRTLAEARANPNVVGAAPFVAAQALLARG-EDMKGALV 119
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
RGI + + + + + + VI+G +LAR LG+ GD + +++P G VT
Sbjct: 120 RGIDPAHEAEVTDLAAENLEGLKALVPGEFRVILGSELARQLGVRAGDAVTLIAPAGQVT 179
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
P G+ R K TV G F +YD+ +V + ++A+ F LE +G+ + +K+
Sbjct: 180 PAGVVPRLKQMTVAGTFNSGHYEYDSALVMLHHEDAERIFRLEGP-TGVRLKLKNLHDAP 238
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + L +++ DW Q+ + +F+ +
Sbjct: 239 EVTQQLAHSLSGNLLIRDWTQQNRTWFAAVQ 269
>gi|295689604|ref|YP_003593297.1| lipoprotein releasing system transmembrane protein [Caulobacter
segnis ATCC 21756]
gi|295431507|gb|ADG10679.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Caulobacter segnis ATCC 21756]
Length = 426
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 94/269 (34%), Positives = 138/269 (51%), Gaps = 3/269 (1%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FSR+E VA RYLF+ RKN +++ S ISF VM+ V ALI VMSVMNGFR +++ R++G
Sbjct: 10 FSRWERSVARRYLFAKRKNGGVALISIISFCAVMLAVFALITVMSVMNGFRAELLGRIVG 69
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
NGH+ Q D + R+ P V++ P V QA V G + ++ +
Sbjct: 70 FNGHLYAQSPLINGPDRDTVIRRIMAAPGVVQAAPMVEAQAMVIGPTQVTGAIVRGVTTA 129
Query: 124 SDFSYLQNSFSRFYG---NVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + G G V+IG +A NLG+ GD I ++SP G T
Sbjct: 130 DLRHMSLIAGNIKQGSLAGFGEGEYGGDMVLIGDRMALNLGVRPGDAITLISPSGPATAF 189
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G R K+Y V G+F + +D VYM L++AQL+F + +V +E+ V DPD +
Sbjct: 190 GSSTREKNYIVGGVFSVGMSQFDEAFVYMPLEQAQLFFGRDTSVDYVEIKVDDPDKAKDY 249
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ G G +V DWQ R +F+ +
Sbjct: 250 KHAVEVASGPGALVSDWQDRNHSYFTALQ 278
>gi|49474194|ref|YP_032236.1| lipoprotein releasing system transmembrane protein lolC [Bartonella
quintana str. Toulouse]
gi|49239698|emb|CAF26073.1| Lipoprotein releasing system transmembrane protein lolC [Bartonella
quintana str. Toulouse]
Length = 422
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 105/266 (39%), Positives = 164/266 (61%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS +E ++A+RY+ N+K+ S+ S IS IG+M+GV AL+VVM+VMNGFR +++ R+LG
Sbjct: 9 FSSYEWMIAFRYMIPNKKHVVASVISIISLIGIMLGVFALVVVMAVMNGFRTELLNRILG 68
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGH+++Q DY+ + L+ + V LP + GQA V G GGSG LVRG+
Sbjct: 69 MNGHLIVQTINSGFSDYKTLIPSLESVDGVKFALPVIEGQALVQGDLQGGSGALVRGMRK 128
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D L+ FD+ +GV+IG LA L +++G + I++P GD TP G+
Sbjct: 129 QDLEKLKTVSQNIKLGSLAQFDKEEGVVIGSGLAEKLRLTVGSDLRIITPDGDATPFGVT 188
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K+Y V+ +F + +YD+ V+M L EAQ++FNL + V +E+F+ DPDA+++
Sbjct: 189 PRVKAYKVIAIFEVGMSEYDSIFVFMPLYEAQMFFNLGDKVQSLELFLNDPDAVDQIKPI 248
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V +IDW+ R Q FFS +
Sbjct: 249 VEKAIDQQVYLIDWRMRNQAFFSALQ 274
>gi|222055189|ref|YP_002537551.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Geobacter sp. FRC-32]
gi|221564478|gb|ACM20450.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Geobacter sp. FRC-32]
Length = 424
Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 86/277 (31%), Positives = 146/277 (52%), Gaps = 11/277 (3%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
FE+ + RYL + RK FIS+ + IS GV +GVMALI+V++VM GF ED+ +++LG
Sbjct: 1 MPFELFIGLRYLKAKRKATFISLITLISVAGVALGVMALIIVLAVMTGFEEDLKEKILGT 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N H+V+ + + D+Q + +RL V+ PF+ Q ++ + VL + +
Sbjct: 61 NAHIVVLKSGEGIEDHQQLMDRLKKFKGVVATTPFIYSQVMLTTGKNVSGVVLRGVDTKT 120
Query: 125 DFSYLQNSFSRFYGN-----------VSNDFDRGKGVIIGKDLARNLGISIGDKINILSP 173
D + GN +D G++IGK+LA+NL + +GD +N++SP
Sbjct: 121 DAQVTNLHKTVVEGNLVDLDRRTPLPSKSDESPLPGIVIGKELAKNLNLFLGDSVNVVSP 180
Query: 174 YGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKD 233
G++TP+GM + K + ++G+F +YD+ + Y+ L +AQ + L +AV+GI++ V D
Sbjct: 181 MGNITPLGMMPKMKRFRLVGIFNTGMFEYDSTLAYVGLGDAQDFLGLGSAVTGIQLKVAD 240
Query: 234 PDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ I + LG DW Q + +
Sbjct: 241 VYKSGEITRRINQELGFPYFARDWMQMNKNILFALRT 277
>gi|116050988|ref|YP_790187.1| hypothetical protein PA14_25450 [Pseudomonas aeruginosa UCBPP-PA14]
gi|115586209|gb|ABJ12224.1| putative lipoprotein releasing system, permease protein
[Pseudomonas aeruginosa UCBPP-PA14]
Length = 433
Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 65/267 (24%), Positives = 123/267 (46%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RY + R+N +IS S S IG+ +GV+A+I+V+SVMNGF+++M R+L
Sbjct: 20 MFRPLPFFIGLRYTRAKRRNHYISFISLTSMIGLALGVLAMIIVLSVMNGFQKEMRTRIL 79
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I PL D+Q +AN +V+ PF Q +S + ++
Sbjct: 80 GMVPHATI-SATQPLDDWQTVANAALRHREVVGAAPFAELQGMLSYKGNMLPVLVNGIDP 138
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G++ + G+++G+ AR +++GDK+ ++ P P G+
Sbjct: 139 QEERKVSIIGEHIVQGSLDDLKPGEFGIVLGEITARRFHVNVGDKLTLIVPEATSAPGGI 198
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + +T++ +F++ ++ + QL V + + +KD +
Sbjct: 199 TPRMQRFTIVALFKVGAELDNSLALIDIADAGQLLRLQPGQVPSVRLELKDLYQSPQVAA 258
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+V+ LG G DW + F+ +
Sbjct: 259 KVVKELGQGFRSSDWTRTQGSLFNAMK 285
>gi|16126173|ref|NP_420737.1| hypothetical protein CC_1930 [Caulobacter crescentus CB15]
gi|221234944|ref|YP_002517380.1| lipoprotein releasing system transmembrane protein lolE
[Caulobacter crescentus NA1000]
gi|13423385|gb|AAK23905.1| conserved hypothetical protein [Caulobacter crescentus CB15]
gi|220964116|gb|ACL95472.1| lipoprotein releasing system transmembrane protein lolE
[Caulobacter crescentus NA1000]
Length = 426
Score = 150 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 95/269 (35%), Positives = 143/269 (53%), Gaps = 3/269 (1%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FSR+E VA RYLF+ RKN +++ S ISF VM+ V ALI VMSVMNGFR +++ R+LG
Sbjct: 10 FSRWERSVARRYLFAKRKNGGVALISVISFSAVMLAVFALITVMSVMNGFRAELLGRILG 69
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
NGH+ Q D I R+ P VI+ P V QA V G + ++ ++
Sbjct: 70 FNGHLYAQSPLINGPDRDTIIRRIKAAPGVIQAAPMVEAQAMVIGPTQVTGAIVRGVTTS 129
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKG---VIIGKDLARNLGISIGDKINILSPYGDVTPM 180
S + G++ G V+IG+ +A+ LG+ GD I I+SP G T
Sbjct: 130 DLRHMSLISGNIKNGSMEGFGQGEYGGDIVLIGERMAQTLGVQPGDPITIISPSGPATAF 189
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G R K+Y V G+F + +D +YM L++AQL+F + V +E+ V+DPD ++
Sbjct: 190 GSSTREKNYIVGGVFSVGMSQFDEAFIYMPLEQAQLFFGRDTTVDYVEIKVEDPDKAKEL 249
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + G G +V DW + +F+ +
Sbjct: 250 KQAVEIASGPGALVNDWMDKNHSYFTALQ 278
>gi|120601937|ref|YP_966337.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Desulfovibrio vulgaris DP4]
gi|120562166|gb|ABM27910.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Desulfovibrio vulgaris DP4]
Length = 411
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 85/271 (31%), Positives = 131/271 (48%), Gaps = 6/271 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
FE+ VA RYLF+ RK AFIS+ S +S IGV +GV +LIVV+ VMNGF D+ ++LG
Sbjct: 1 MSFELFVAGRYLFARRKQAFISVISAMSIIGVGLGVASLIVVLGVMNGFTTDLRDKILGA 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N HV++ + +K + G G+++RGI
Sbjct: 61 NAHVIVMSSKPAAMRDVGELMGRVQGVRGVKGATPFIYSETMLSTPHGVKGLVLRGIDPQ 120
Query: 125 DFSYLQNSFSRFYGNVSND----FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + SR D D G+IIG++LA LGI+ G ++N+LSP G T
Sbjct: 121 TAPGVLSILSRMTRGGLRDLPAGPDGAHGIIIGQELANRLGITTGSRVNLLSPDGQKTTT 180
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEK 239
G R + + V G+F +YD+ + +++L A+ L VSGIEV V D +
Sbjct: 181 GFAPRIRPFRVAGIFTTGMYEYDSSLGFVTLDAARDILGLPEGQVSGIEVVVDDVYKADV 240
Query: 240 THENIVRIL-GNGVVVIDWQQRYQIFFSCYE 269
E++++ G V +W + F+ +
Sbjct: 241 IGEDVLKASGGYPYYVRNWMEMNANLFAALK 271
>gi|241767506|ref|ZP_04765187.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Acidovorax delafieldii 2AN]
gi|241361667|gb|EER58009.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Acidovorax delafieldii 2AN]
Length = 417
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 73/270 (27%), Positives = 129/270 (47%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNR---KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E+ + WRY + R +N FIS S +S +G+ +GV ALI+V+SVMNGF++++
Sbjct: 1 MQIPYELALGWRYTRAGRATRRNGFISFISGVSMLGIALGVAALIIVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + H+ I + + G + G LVR
Sbjct: 61 RMLSVVSHIEIFAPQGAALPDPARTLAEARQNPNVVGAAPFVGAQALLARGEDMKGTLVR 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
GI + + + + + V++G +LAR LG+ GD + +++P G VTP
Sbjct: 121 GIDPALEGAVTDLAATNEETLKLLVPGEFRVVLGGELARALGVRKGDAVTLIAPAGQVTP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
G+ R K TV G F +YD+ +V + ++AQ F LE +GI + +KD +
Sbjct: 181 AGVVPRLKQMTVAGTFDSGHYEYDSALVLLHHEDAQRIFRLEGP-TGIRLKLKDLHQARE 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + L +++ DW Q+ + +F+ +
Sbjct: 240 VAQQLAGSLSGMLLIRDWTQQNRTWFAAVQ 269
>gi|15837678|ref|NP_298366.1| hypothetical protein XF1076 [Xylella fastidiosa 9a5c]
gi|10720069|sp|Q9PEF2|LOLC_XYLFA RecName: Full=Lipoprotein-releasing system transmembrane protein
lolC
gi|9106026|gb|AAF83886.1|AE003944_3 conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 413
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 64/267 (23%), Positives = 129/267 (48%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F+ V + RYL + R+N FIS S S +G+ +GV LI ++VM+GF++++ R+L
Sbjct: 1 MFNPLSVAIGLRYLRAKRRNGFISFISMASILGIALGVTVLITTLAVMSGFQKEIRDRLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + + P+ D+Q P V P++ +A + G + + +
Sbjct: 61 QMAAHATVSAQGAPMHDWQHAVALAMTDPRVAGAAPYIESEALLQGERHQPAMMRGIVPN 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
D + + G++ + +++GK+LA LG+ +GD + +L TP+G
Sbjct: 121 QEDKVSV-LAQKLKVGSIDSLKPGEYNILLGKELALWLGVDVGDSVIVLLSQTQTTPVGT 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV G+F + + + D G+ +++++ Q + + V+G+ + + D D
Sbjct: 180 MPRMKRFTVSGLFEVGYNEIDRGLAVVNMEDMQKVMRM-DGVTGVRLKLHDMDHAWDVAR 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ L +V DW + +S +
Sbjct: 239 DLAVRLNGPYLVSDWTRENANLYSSLK 265
>gi|319408596|emb|CBI82251.1| ABC transporter, permease protein [Bartonella schoenbuchensis R1]
Length = 426
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 105/266 (39%), Positives = 162/266 (60%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS +E ++++RY+ N+K+ F S+ S IS IG+M+GV AL+VVM+VMNGFR +++ R+LG
Sbjct: 13 FSSYEWMISFRYMIPNKKHMFTSVVSIISLIGIMLGVFALVVVMAVMNGFRTELLNRILG 72
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGH+++Q DY + L+ I V LP V GQA V G GG+G L+RG+
Sbjct: 73 MNGHLIVQTTDSGFSDYNTFISYLESIDGVNSALPVVEGQALVQGDIGGGTGALIRGMRQ 132
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D L+ F+ +G+ IG LA LG++IG + I++P GDVTP G+
Sbjct: 133 EDLEKLKIVSQNIKSGTLAHFEEEEGIAIGSGLAEKLGLTIGSDLRIITPDGDVTPFGVM 192
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K+Y ++ +F + +YD+ V+M L EAQ +FNL + IE+F+ DPD +++ +
Sbjct: 193 PRIKAYKIIAIFEVGMSEYDSIFVFMPLFEAQAFFNLGQKIQSIELFLNDPDTVDQIKQV 252
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
I + + V +IDW+ R Q FFS +
Sbjct: 253 IEKEIDQQVYLIDWRMRNQAFFSALQ 278
>gi|71899423|ref|ZP_00681582.1| Protein of unknown function DUF214 [Xylella fastidiosa Ann-1]
gi|71730832|gb|EAO32904.1| Protein of unknown function DUF214 [Xylella fastidiosa Ann-1]
Length = 413
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 63/267 (23%), Positives = 128/267 (47%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F+ V + RYL + R+N FIS S S +G+ +GV LI ++VM+GF++++ R+L
Sbjct: 1 MFNPLSVAIGLRYLRAKRRNGFISFISMASILGIALGVTVLITTLAVMSGFQKEIRDRLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + + P+ D+Q P V P++ +A + G + + +
Sbjct: 61 QMAAHATVSAQGAPMHDWQHAVALAMTDPRVAGAAPYIESEALLQGERHQPAMMRGIVPN 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G++ + +++GK+LA LG+ +GD + +L TP+G
Sbjct: 121 QETKVSV-LAQKLKVGSIDSLKPGEYNILLGKELALWLGVDVGDSVIVLLSQTQTTPVGT 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV G+F + + + D G+ +++++ Q + + V+G+ + + D D
Sbjct: 180 MPRMKRFTVSGLFEVGYNEIDRGLAVVNMEDMQKIMRM-DGVTGVRLKLHDMDHAWDVAS 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ L +V DW + +S +
Sbjct: 239 DLAVRLNGPYLVSDWTRENANLYSSLK 265
>gi|28198273|ref|NP_778587.1| lipoprotein releasing system transmembrane protein [Xylella
fastidiosa Temecula1]
gi|182680910|ref|YP_001829070.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Xylella fastidiosa M23]
gi|32129712|sp|Q87EF5|LOLC_XYLFT RecName: Full=Lipoprotein-releasing system transmembrane protein
lolC
gi|28056343|gb|AAO28236.1| lipoprotein releasing system transmembrane protein [Xylella
fastidiosa Temecula1]
gi|182631020|gb|ACB91796.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Xylella fastidiosa M23]
gi|307579378|gb|ADN63347.1| lipoprotein releasing system transmembrane protein [Xylella
fastidiosa subsp. fastidiosa GB514]
Length = 413
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 63/267 (23%), Positives = 129/267 (48%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F+ V + RYL + R+N FIS S S +G+ +GV LI ++VM+GF++++ R+L
Sbjct: 1 MFNPLSVAIGLRYLRAKRRNGFISFISMASILGIALGVTVLITTLAVMSGFQKEIRDRLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
++ H + + P+ D+Q P V P++ +A + G + + +
Sbjct: 61 QMSAHATVSAQGAPMHDWQHAVALAMTDPRVAGAAPYIESEALLQGERHQPAMMRGIVPN 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G++ + +++GK+LA LG+ +GD + +L TP+G
Sbjct: 121 QETKVSV-LAQKLKVGSIDSLKPGEYNILLGKELALWLGVDVGDSVIVLLSQTQTTPVGT 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV G+F + + + D G+ +++++ Q + + V+G+ + + D D
Sbjct: 180 MPRMKRFTVSGLFEVGYNEIDRGLAVVNMEDMQKIMRM-DGVTGVRLKLHDMDHAWDVAS 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ L +V DW + +S +
Sbjct: 239 DLAVRLNGPYLVSDWTRENANLYSSLK 265
>gi|71275597|ref|ZP_00651882.1| Protein of unknown function DUF214 [Xylella fastidiosa Dixon]
gi|71899494|ref|ZP_00681651.1| Protein of unknown function DUF214 [Xylella fastidiosa Ann-1]
gi|170729595|ref|YP_001775028.1| lipoprotein releasing system transmembrane protein [Xylella
fastidiosa M12]
gi|71163488|gb|EAO13205.1| Protein of unknown function DUF214 [Xylella fastidiosa Dixon]
gi|71730714|gb|EAO32788.1| Protein of unknown function DUF214 [Xylella fastidiosa Ann-1]
gi|167964388|gb|ACA11398.1| lipoprotein releasing system transmembrane protein [Xylella
fastidiosa M12]
Length = 413
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 63/267 (23%), Positives = 128/267 (47%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F+ V + RYL + R+N FIS S S +G+ +GV LI ++VM+GF++++ R+L
Sbjct: 1 MFNPLSVAIGLRYLRAKRRNGFISFISMASILGIALGVTVLITTLAVMSGFQKEIRDRLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + + P+ D+Q P V P++ +A + G + + +
Sbjct: 61 QMAAHATVSAQGAPMHDWQHAVALAMTDPRVAGAAPYIESEALLQGERHQPAMMRGIVPN 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G++ + +++GK+LA LG+ +GD + +L TP+G
Sbjct: 121 QEAKVSV-LAQKLKVGSIDSLKPGEYNILLGKELALWLGVDVGDSVIVLLSQTQTTPVGT 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV G+F + + + D G+ +++++ Q + + V+G+ + + D D
Sbjct: 180 MPRMKRFTVSGLFEVGYNEIDRGLAVVNMEDMQKIMRM-DGVTGVRLKLHDMDHAWDVAS 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ L +V DW + +S +
Sbjct: 239 DLAVRLNGPYLVSDWTRENANLYSSLK 265
>gi|209964525|ref|YP_002297440.1| lipoprotein releasing system, transmembrane protein, LolC
[Rhodospirillum centenum SW]
gi|209957991|gb|ACI98627.1| lipoprotein releasing system, transmembrane protein, LolC
[Rhodospirillum centenum SW]
Length = 414
Score = 149 bits (375), Expect = 4e-34, Method: Composition-based stats.
Identities = 88/267 (32%), Positives = 141/267 (52%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
IFS FE +VA RYL + R+ FIS+ + S +G+ +GV LI+VMSVMNGFR +++ R+L
Sbjct: 2 IFSAFERMVAMRYLRARRQEGFISVIAGFSLLGIALGVATLIIVMSVMNGFRAELLGRIL 61
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+NGH + PL DY +A R+ P V+ V+P+V GQA VS +
Sbjct: 62 GVNGHAYVYATMGPLEDYGPLAERVKAAPGVVAVMPYVEGQALVSIQGVATGVQVRGIRP 121
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G+ IG LA+ G+ +GD++ ++SP G T G
Sbjct: 122 EDFRTR--PVVGDSVVLGDGNGFGEGGIAIGIRLAQRFGLRVGDELTLISPRGATTAFGT 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R+ + + +F + +YD+ +VYM L+ AQ ++ + ++ +EVFV DP+ I
Sbjct: 180 VPRTGRFPIAAIFEVGMSEYDSNIVYMPLETAQAFYRMPGQITALEVFVADPNDIGLLRA 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ + V+DWQQ FF+ +
Sbjct: 240 SLGGAVAGQGRVLDWQQTNSSFFTALQ 266
>gi|15598182|ref|NP_251676.1| hypothetical protein PA2986 [Pseudomonas aeruginosa PAO1]
gi|218890815|ref|YP_002439679.1| putative lipoprotein releasing system, permease protein
[Pseudomonas aeruginosa LESB58]
gi|254241691|ref|ZP_04935013.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|9949086|gb|AAG06374.1|AE004724_3 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|126195069|gb|EAZ59132.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|218771038|emb|CAW26803.1| putative lipoprotein releasing system, permease protein
[Pseudomonas aeruginosa LESB58]
Length = 433
Score = 149 bits (375), Expect = 4e-34, Method: Composition-based stats.
Identities = 65/267 (24%), Positives = 123/267 (46%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RY + R+N +IS S S IG+ +GV+A+I+V+SVMNGF+++M R+L
Sbjct: 20 MFRPLPFFIGLRYTRAKRRNHYISFISLTSMIGLALGVLAMIIVLSVMNGFQKEMRTRIL 79
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I PL D+Q +AN +V+ PF Q +S + ++
Sbjct: 80 GMVPHATI-SAAQPLDDWQTVANAALRHREVVGAAPFAELQGMLSYKGNMLPVLVNGIDP 138
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G++ + G+++G+ AR +++GDK+ ++ P P G+
Sbjct: 139 QEERKVSIVGEHIVQGSLDDLKPGEFGIVLGEITARRFHVNVGDKLTLIVPEATSAPGGI 198
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + +T++ +F++ ++ + QL V + + +KD +
Sbjct: 199 TPRMQRFTIVALFKVGAELDNSLALIDIADAGQLLRLQPGQVPSVRLELKDLYQSPQVAA 258
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+V+ LG G DW + F+ +
Sbjct: 259 KVVKELGQGFRSSDWTRTQGSLFNAMK 285
>gi|325204219|gb|ADY99672.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Neisseria meningitidis M01-240355]
Length = 415
Score = 149 bits (375), Expect = 4e-34, Method: Composition-based stats.
Identities = 68/268 (25%), Positives = 133/268 (49%), Gaps = 2/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS E + RYL + ++N F+S + +S G+ +GV ALIVV+SVMNGF++++ ++L
Sbjct: 1 MFS-LEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVLSVMNGFQKEIRGQLL 59
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I D++ + + ++ P+VS QA ++ + +
Sbjct: 60 NVAPHAEIGYIDNTDTDWRNLLRFTENRKGILAAAPYVSNQALLANAGEIRGVQMRGILP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++ G + +I+G LA LG +G+K+ +++P G+VTP G+
Sbjct: 120 SEERKVVEYGDKMPAGKFEDLIPGEFDIILGVGLAEALGAEVGNKVTVITPEGNVTPAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV+G+ + + DN + +Q+A++ + L+ V+G+ + + DP
Sbjct: 180 VPRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLDKEVAGLRLKLADPQNAPALTA 239
Query: 243 NIV-RILGNGVVVIDWQQRYQIFFSCYE 269
++ + V V DW + +F E
Sbjct: 240 KLIPEAQRDAVWVRDWTYNNRSYFEAVE 267
>gi|56478739|ref|YP_160328.1| hypothetical protein ebA5819 [Aromatoleum aromaticum EbN1]
gi|56314782|emb|CAI09427.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length = 417
Score = 149 bits (375), Expect = 4e-34, Method: Composition-based stats.
Identities = 77/268 (28%), Positives = 139/268 (51%), Gaps = 4/268 (1%)
Query: 5 SRFEVIVAWRYLFSNRK----NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
R+E++V RY S ++ N FIS S +S +G +G+ ALIVV+SVMNGF+E++ R
Sbjct: 1 MRYEILVGLRYTRSRKRAQGRNRFISFISLVSMLGTALGIAALIVVLSVMNGFQEELRTR 60
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+LG+ HV + L +Q +A++ PDV+ P++ Q +S + ++
Sbjct: 61 ILGVASHVQVSGFDGELDAWQQVADQAARHPDVVATAPYIQEQGMLSFDQAVRGTLVRGV 120
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ ++ G+ G+++G+DLA L +GDK+ +++P G VTP
Sbjct: 121 LPGAEDGVADFVRFMRSGSFDALQPGRFGIVLGRDLAFALQAQVGDKVTLIAPQGLVTPA 180
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ R K + V+G+F +YD+G+ + L++AQ + ++ VSG+ + + D A +
Sbjct: 181 AVLPRVKQFEVVGIFEAGMFEYDSGLALIHLRDAQALYRMDERVSGVRLKLDDLFAAPRV 240
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ ++ V V DW + + FF
Sbjct: 241 ARELPGLIEGAVAVSDWTRSHANFFRAV 268
>gi|92113706|ref|YP_573634.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Chromohalobacter salexigens DSM 3043]
gi|91796796|gb|ABE58935.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Chromohalobacter salexigens DSM 3043]
Length = 413
Score = 149 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 77/267 (28%), Positives = 130/267 (48%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ R ++ RY+ + R+N FIS S S +G+M+GV LI+V+SVMNGF ++ RVL
Sbjct: 1 MLDRLPFLIGLRYVRAKRRNHFISFISLTSMLGLMLGVAVLILVLSVMNGFDHELRTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H + + D++ +A RL+ VI PFV Q S ++
Sbjct: 61 GMVPH-TRIEAQGGMTDWKALAERLEKRDYVIGAAPFVQQQGMFSSEGRTQGAMVNGIQP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G++ + V++G LARNLG+ +GD++ +L P +TP G+
Sbjct: 120 DYESKVSIIDEHMTRGSLDDLAPGEWHVVLGDLLARNLGVGVGDRVTLLVPEASITPGGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV G+F++ D + Y ++Q+ Q L ++V G+ + + D
Sbjct: 180 FPRLKRFTVSGIFKVGADL-DANLAYANIQDMQTLGRLGDSVEGLRLELDDLFQAGPVTR 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
IV LG+G +DW + F +
Sbjct: 239 AIVNDLGSGYRGVDWTYTHGNLFQAIQ 265
>gi|296388521|ref|ZP_06877996.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas aeruginosa PAb1]
Length = 414
Score = 149 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 65/267 (24%), Positives = 123/267 (46%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RY + R+N +IS S S IG+ +GV+A+I+V+SVMNGF+++M R+L
Sbjct: 1 MFRPLPFFIGLRYTRAKRRNHYISFISLTSMIGLALGVLAMIIVLSVMNGFQKEMRTRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I PL D+Q +AN +V+ PF Q +S + ++
Sbjct: 61 GMVPHATI-SATQPLDDWQTVANAALRHREVVGAAPFAELQGMLSYKGNMLPVLVNGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G++ + G+++G+ AR +++GDK+ ++ P P G+
Sbjct: 120 QEERKVSIIGEHIVQGSLDDLKPGEFGIVLGEITARRFHVNVGDKLTLIVPEATSAPGGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + +T++ +F++ ++ + QL V + + +KD +
Sbjct: 180 TPRMQRFTIVALFKVGAELDNSLALIDIADAGQLLRLQPGQVPSVRLELKDLYQSPQVAA 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+V+ LG G DW + F+ +
Sbjct: 240 KVVKELGQGFRSSDWTRTQGSLFNAMK 266
>gi|254235960|ref|ZP_04929283.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126167891|gb|EAZ53402.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
Length = 433
Score = 149 bits (374), Expect = 5e-34, Method: Composition-based stats.
Identities = 65/267 (24%), Positives = 123/267 (46%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RY + R+N +IS S S IG+ +GV+A+I+V+SVMNGF+++M R+L
Sbjct: 20 MFRPLPFFIGLRYTRAKRRNHYISFISLTSMIGLALGVLAMIIVLSVMNGFQKEMRTRIL 79
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I PL D+Q +AN +V+ PF Q +S + ++
Sbjct: 80 GMVPHATI-SAAQPLDDWQTVANAALRHREVVGAAPFAELQGMLSYKGNMLPVLVNGIDP 138
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G++ + G+++G+ AR +++GDK+ ++ P P G+
Sbjct: 139 QEERKVSIVGEHIVQGSLDDLKSGEFGIVLGEITARRFHVNVGDKLTLIVPEATSAPGGI 198
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + +T++ +F++ ++ + QL V + + +KD +
Sbjct: 199 TPRMQRFTIVALFKVGAELDNSLALIDIADAGQLLRLQPGQVPSVRLELKDLYQSPQVAA 258
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+V+ LG G DW + F+ +
Sbjct: 259 KVVKELGQGFRSSDWTRTQGSLFNAMK 285
>gi|327481331|gb|AEA84641.1| lipoprotein releasing system transmembrane protein LolE
[Pseudomonas stutzeri DSM 4166]
Length = 415
Score = 149 bits (374), Expect = 5e-34, Method: Composition-based stats.
Identities = 72/267 (26%), Positives = 121/267 (45%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RY + R+N FIS S S IG+ +GV+A+I+V+SVMNGF+ +M R+L
Sbjct: 2 MFRPISVFIGSRYTRAKRRNHFISFISLTSLIGLALGVLAMIMVLSVMNGFQREMSARIL 61
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H + PL D+Q +A RL P ++ + P + +S S +
Sbjct: 62 GMVPHATV-IGEQPLDDWQAVAARLSAHPQIVGMAPVTQLEGMLSFKGSMQPIQISGIDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
++ G++ GVIIG AR G+ +GDK+ ++ P +P G+
Sbjct: 121 QAEEQVSIVGERLVGGSLDALKPGEYGVIIGLMTARRFGLKLGDKLTLIVPEVSSSPGGV 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + V+G+F++ + + AQ++ + V G+ + + D
Sbjct: 181 TPRMQRLNVVGVFKVGADLDGSLGMIHRADAAQIHRWMPQQVQGVRLKLDDLYRAPDVAA 240
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ LG G V DW FS +
Sbjct: 241 QVQAALGEGYRVEDWSYTQGSLFSAMK 267
>gi|296840854|ref|ZP_06863602.2| lipoprotein releasing system transmembrane protein LolC [Neisseria
polysaccharea ATCC 43768]
gi|296839803|gb|EFH23741.1| lipoprotein releasing system transmembrane protein LolC [Neisseria
polysaccharea ATCC 43768]
Length = 644
Score = 149 bits (374), Expect = 5e-34, Method: Composition-based stats.
Identities = 69/268 (25%), Positives = 133/268 (49%), Gaps = 2/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS E + RYL + ++N F+S + +S G+ +GV ALIVV+SVMNGF++++ ++L
Sbjct: 1 MFS-LEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVLSVMNGFQKEIRGQLL 59
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I D++ + + ++ V P+VS QA ++ + +
Sbjct: 60 NVAPHAEIGYIDNTGTDWRNLLRFTENHKGILAVAPYVSNQALLANAGEIRGVQMRGILP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++ G + +I+G LA LG +G K+ +++P G+VTP G+
Sbjct: 120 SEERKVVEYGDKMPAGKFEDLIPGEFDIILGVGLAEALGAEVGSKVTVITPEGNVTPAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV+G+ + + DN + +Q+A++ + L+ V+G+ + + DP
Sbjct: 180 VPRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLDKEVAGLRLKLADPQNAPALTA 239
Query: 243 NIV-RILGNGVVVIDWQQRYQIFFSCYE 269
++ + V V DW + +F E
Sbjct: 240 TLIPEAQRDAVWVRDWTFSNRSYFEAVE 267
>gi|167646773|ref|YP_001684436.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Caulobacter sp. K31]
gi|167349203|gb|ABZ71938.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Caulobacter sp. K31]
Length = 424
Score = 149 bits (374), Expect = 5e-34, Method: Composition-based stats.
Identities = 95/269 (35%), Positives = 135/269 (50%), Gaps = 3/269 (1%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F +E VAWRYL + RKN +++ + ISF VM+ V ALI VMSVMNGFR +++ R+LG
Sbjct: 8 FGTWERTVAWRYLRNKRKNGGVALIAIISFAAVMLAVFALITVMSVMNGFRAELLGRLLG 67
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
NGHV Q D + R+ +P V + P V QA V G S ++
Sbjct: 68 FNGHVYAQGPLLNGPDRDGVITRIKAVPGVTQAAPMVEAQAMVIGPSQVSGAIVRGVTPQ 127
Query: 124 S---DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
N G V+IG +ARNLG+S+GD I ++SP G T
Sbjct: 128 DLRGMKMISTNIKRGSLAGFGEGEYGGDIVLIGDRMARNLGLSVGDAITLISPSGPATAF 187
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G R K YTV G+F + +D VYM+L +AQL+F + ++ +E+ V DPD +
Sbjct: 188 GTSTREKDYTVGGIFSVGMSQFDESFVYMALPQAQLFFGRDASIDYVEIKVADPDKAKAI 247
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
I + G G V DW + +F+ +
Sbjct: 248 KPVIEQASGPGAFVQDWMDKNSSYFNALQ 276
>gi|319898899|ref|YP_004158992.1| ABC transporter, permease protein [Bartonella clarridgeiae 73]
gi|319402863|emb|CBI76414.1| ABC transporter, permease protein [Bartonella clarridgeiae 73]
Length = 422
Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats.
Identities = 106/266 (39%), Positives = 164/266 (61%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS +E ++A+RY+ N+K+ F SI S IS IG+M+GV AL+V+M+VMNGFR +++ R+LG
Sbjct: 9 FSSYEWMIAFRYMIPNKKHMFTSIVSIISLIGIMLGVFALVVIMAVMNGFRTELLSRILG 68
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGH+V+Q DY + + L+ + VLP + GQA V G GG+G LVRG+
Sbjct: 69 MNGHLVVQTIDSNFTDYNTLISSLESTKGIKFVLPIIEGQALVQGNFEGGTGALVRGVRQ 128
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D L+ FD+ +GV IG LA LG+++G + I++P GD TP G+
Sbjct: 129 EDLEKLKTVAQNIISGTLAQFDKEEGVAIGSGLAEKLGLTVGSDLRIITPNGDDTPFGVT 188
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K+Y V+ +F + +YD+ ++M L EAQ++FNL + +E+F+ DPDAI++
Sbjct: 189 PRVKAYKVVAIFEVGMSEYDSIFIFMPLHEAQIFFNLGEKIQSLELFLNDPDAIDQIKPV 248
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
I + + + +IDW+ R Q FFS +
Sbjct: 249 IEKAVNQQINLIDWRMRNQAFFSALQ 274
>gi|152988493|ref|YP_001347547.1| hypothetical protein PSPA7_2175 [Pseudomonas aeruginosa PA7]
gi|150963651|gb|ABR85676.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
Length = 414
Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats.
Identities = 64/267 (23%), Positives = 122/267 (45%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RY + R+N +IS S S IG+ +GV+A+I+V+SVMNGF+++M R+L
Sbjct: 1 MFRPLPFFIGLRYTRAKRRNHYISFISLTSMIGLALGVLAMIIVLSVMNGFQKEMRTRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I PL D+Q +A +V+ PF Q +S + ++
Sbjct: 61 GMVPHATI-SAAQPLDDWQTVAAAALKHREVVGAAPFAELQGMLSYKGNMLPVLVNGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G++ + G+++G+ AR +++GDK+ ++ P P G+
Sbjct: 120 QEERKVSIVGEHIVQGSLDDLKPGEFGIVLGEITARRFHVNVGDKLTLIVPEATSAPGGI 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + +T++ +F++ ++ + QL V + + +KD +
Sbjct: 180 TPRMQRFTIVALFKVGAELDNSLALVDIADAGQLLRLQPGQVPSVRLELKDLYQSPQVAA 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+V+ LG G DW + F+ +
Sbjct: 240 KVVKELGQGFRSSDWTRTQGSLFNAMK 266
>gi|66045147|ref|YP_234988.1| hypothetical protein Psyr_1906 [Pseudomonas syringae pv. syringae
B728a]
gi|63255854|gb|AAY36950.1| Protein of unknown function DUF214 [Pseudomonas syringae pv.
syringae B728a]
gi|330973218|gb|EGH73284.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. aceris str. M302273PT]
Length = 414
Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats.
Identities = 74/267 (27%), Positives = 123/267 (46%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+ +FIS S S IG+ +GV+A+IVV+SVMNGF+ +M R+L
Sbjct: 1 MFRPLPIFIGMRYTRAKRRKSFISFISMTSMIGLALGVLAMIVVLSVMNGFQREMSSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H VI P+ D++ +A+ P+V +PF + +S S +
Sbjct: 61 GMVPHAVI-AGSTPVDDWKPLADAALKNPEVTAAVPFTDMEGMLSYKGSMQPIQISGVDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + GN+ + GV++G AR +SIGDK+ ++ P P G+
Sbjct: 120 ALEHEVSIVTQHITRGNLEDLKPGEFGVVLGDITARRFRLSIGDKLTLIVPEVSSAPGGI 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + TV+G+F++ + + AQ+ N V G+ + +KD +
Sbjct: 180 TPRMQRLTVVGIFKVGAELDGSMGLINIADAAQMQRWQPNQVQGVRLALKDLYKAPQVST 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I LG G DW FS +
Sbjct: 240 AIAAGLGEGYRADDWTHTQGSLFSAMK 266
>gi|15677107|ref|NP_274259.1| hypothetical protein NMB1235 [Neisseria meningitidis MC58]
gi|9977671|sp|P57062|LOLC_NEIMB RecName: Full=Lipoprotein-releasing system transmembrane protein
lolC
gi|7226474|gb|AAF41616.1| conserved hypothetical protein [Neisseria meningitidis MC58]
gi|316985093|gb|EFV64046.1| liporeleasing system, transmembrane , LolC/E family protein
[Neisseria meningitidis H44/76]
gi|325140535|gb|EGC63056.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Neisseria meningitidis CU385]
gi|325200134|gb|ADY95589.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Neisseria meningitidis H44/76]
Length = 415
Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats.
Identities = 68/268 (25%), Positives = 133/268 (49%), Gaps = 2/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS E + RYL + ++N F+S + +S G+ +GV ALIVV+SVMNGF++++ ++L
Sbjct: 1 MFS-LEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVLSVMNGFQKEIRGQLL 59
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I D++ + + ++ P+VS QA ++ + +
Sbjct: 60 NVAPHAEIGYIDNTDTDWRNLLRFTENRKGILAAAPYVSNQALLANAGEIRGVQMRGILP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++ G + +I+G LA LG +G+K+ +++P G+VTP G+
Sbjct: 120 SEERKVVEYGDKMPAGKFEDLIPGEFDIILGVGLAEALGAEVGNKVTVITPEGNVTPAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV+G+ + + DN + +Q+A++ + L+ V+G+ + + DP
Sbjct: 180 VPRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLDKEVAGLRLKLADPQNAPALTA 239
Query: 243 NIV-RILGNGVVVIDWQQRYQIFFSCYE 269
++ + V V DW + +F E
Sbjct: 240 TLIPEAQRDAVWVRDWTYSNRSYFEAVE 267
>gi|145589649|ref|YP_001156246.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|145048055|gb|ABP34682.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 420
Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats.
Identities = 71/271 (26%), Positives = 131/271 (48%), Gaps = 8/271 (2%)
Query: 6 RFEVIVAWRYLFSNRKNA------FISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
E+ + RY S R+ F+S S IS G+ +GV +LIVV+SVMNGF++D+
Sbjct: 5 PIELEIGLRYTRSKRRKTVGKHDGFLSFISGISTAGIALGVASLIVVLSVMNGFQKDVRD 64
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV I L +++ +A ++ P V+ V P V+ Q +S + +
Sbjct: 65 RMLSVLSHVEI-TAPDGLANWEPLALKVAAQPHVVGVAPMVASQGLLSRDNVMRGVAIRG 123
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + G++++ G GV +G LA +G +GD+IN++ P D+TP
Sbjct: 124 VSPSEEGKVSDLPKQFVAGSINDLTPGGFGVALGAQLAALVGAHVGDRINLIVPESDLTP 183
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
G R ++ V+G+ ++D+ + M ++A L + SG+ V V D +
Sbjct: 184 AGAMPRMRTLQVVGIVDSGHYEFDSSLAIMHWKDAAALLRLHDP-SGLRVKVDDMQRAPE 242
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ ++ + V DW + + +F+ ++
Sbjct: 243 VANELAAVVPQALWVTDWSRSNRNWFAAVQT 273
>gi|302184821|ref|ZP_07261494.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. syringae 642]
Length = 414
Score = 148 bits (372), Expect = 7e-34, Method: Composition-based stats.
Identities = 73/267 (27%), Positives = 124/267 (46%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+ +FIS S S IG+ +GV+A+IVV+SVMNGF+ +M R+L
Sbjct: 1 MFRPLPIFIGMRYTRAKRRKSFISFISMTSMIGLALGVLAMIVVLSVMNGFQREMSSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H VI P+ D++ +A+ P+V +PF + +S S +
Sbjct: 61 GMVPHAVI-AGTTPVDDWKPLADAALKNPEVTAAVPFTDMEGMLSYKGSMQPIQISGVDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G++ + GV++G AR +SIGDK+ ++ P P G+
Sbjct: 120 ALEHEVSIVTQHITRGSLEDLKPGEFGVVLGDITARRFRLSIGDKLTLIVPEVSSAPGGI 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + TV+G+F++ + + AQ+ N V G+ + +KD +
Sbjct: 180 TPRLQRLTVVGIFKVGAELDGSMGLINIADAAQMQRWQPNQVQGVRLALKDLYKAPQVST 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I LG+G DW FS +
Sbjct: 240 AIAAGLGDGYRADDWTHTQGSLFSAMK 266
>gi|325128359|gb|EGC51243.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Neisseria meningitidis N1568]
gi|325134518|gb|EGC57163.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Neisseria meningitidis M13399]
gi|325144621|gb|EGC66920.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Neisseria meningitidis M01-240013]
gi|325205989|gb|ADZ01442.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Neisseria meningitidis M04-240196]
Length = 415
Score = 148 bits (372), Expect = 8e-34, Method: Composition-based stats.
Identities = 68/268 (25%), Positives = 133/268 (49%), Gaps = 2/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS E + RYL + ++N F+S + +S G+ +GV ALIVV+SVMNGF++++ ++L
Sbjct: 1 MFS-LEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVLSVMNGFQKEIRGQLL 59
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I D++ + + ++ P+VS QA ++ + +
Sbjct: 60 NVAPHAEIGYIDNTDTDWRNLLRFTENRKGILAAAPYVSNQALLANAGEIRGVQMRGILP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++ G + +I+G LA LG +G+K+ +++P G+VTP G+
Sbjct: 120 SEERKVVEYGDKMPAGKFEDLIPGEFDIILGVGLAEALGAEVGNKVTVITPEGNVTPAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV+G+ + + DN + +Q+A++ + L+ V+G+ + + DP
Sbjct: 180 VPRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLDKEVAGLRLKLADPQNAPALTA 239
Query: 243 NIV-RILGNGVVVIDWQQRYQIFFSCYE 269
++ + V V DW + +F E
Sbjct: 240 KLIPEAQRDTVWVRDWTFSNRSYFEAVE 267
>gi|254670085|emb|CBA04983.1| lipoprotein releasing system transmembrane protein [Neisseria
meningitidis alpha153]
Length = 415
Score = 148 bits (372), Expect = 8e-34, Method: Composition-based stats.
Identities = 68/268 (25%), Positives = 133/268 (49%), Gaps = 2/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS E + RYL + ++N F+S + +S G+ +GV ALIVV+SVMNGF++++ ++L
Sbjct: 1 MFS-LEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVLSVMNGFQKEIRGQLL 59
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I D++ + + ++ P+VS QA ++ + +
Sbjct: 60 NVAPHAEIGYIDNTDTDWRNLLRFTENRKGILAAAPYVSNQALLANAGEIRGVQMRGILP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++ G + +I+G LA LG +G+K+ +++P G+VTP G+
Sbjct: 120 SEERKVVEYGDKMPAGKFEDLIPGEFDIILGVGLAEALGAEVGNKVTVITPEGNVTPAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV+G+ + + DN + +Q+A++ + L+ V+G+ + + DP
Sbjct: 180 VPRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLDKEVAGLRLKLADPQNAPALTA 239
Query: 243 NIV-RILGNGVVVIDWQQRYQIFFSCYE 269
++ + V V DW + +F E
Sbjct: 240 TLIPEAQRDAVWVRDWTYNNRSYFEAVE 267
>gi|107102535|ref|ZP_01366453.1| hypothetical protein PaerPA_01003599 [Pseudomonas aeruginosa PACS2]
Length = 414
Score = 148 bits (372), Expect = 8e-34, Method: Composition-based stats.
Identities = 65/267 (24%), Positives = 123/267 (46%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RY + R+N +IS S S IG+ +GV+A+I+V+SVMNGF+++M R+L
Sbjct: 1 MFRPLPFFIGLRYTRAKRRNHYISFISLTSMIGLALGVLAMIIVLSVMNGFQKEMRTRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I PL D+Q +AN +V+ PF Q +S + ++
Sbjct: 61 GMVPHATI-SAAQPLDDWQTVANAALRHREVVGAAPFAELQGMLSYKGNMLPVLVNGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G++ + G+++G+ AR +++GDK+ ++ P P G+
Sbjct: 120 QEERKVSIVGEHIVQGSLDDLKPGEFGIVLGEITARRFHVNVGDKLTLIVPEATSAPGGI 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + +T++ +F++ ++ + QL V + + +KD +
Sbjct: 180 TPRMQRFTIVALFKVGAELDNSLALIDIADAGQLLRLQPGQVPSVRLELKDLYQSPQVAA 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+V+ LG G DW + F+ +
Sbjct: 240 KVVKELGQGFRSSDWTRTQGSLFNAMK 266
>gi|261401207|ref|ZP_05987332.1| lipoprotein releasing system transmembrane protein LolC [Neisseria
lactamica ATCC 23970]
gi|269208785|gb|EEZ75240.1| lipoprotein releasing system transmembrane protein LolC [Neisseria
lactamica ATCC 23970]
Length = 415
Score = 148 bits (372), Expect = 8e-34, Method: Composition-based stats.
Identities = 67/268 (25%), Positives = 133/268 (49%), Gaps = 2/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS E + RYL + ++N F+S + +S G+ +GV ALIVV+SVMNGF++++ ++L
Sbjct: 1 MFS-LEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVLSVMNGFQKEIRGQLL 59
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I D++ + + ++ P+VS QA ++ + +
Sbjct: 60 NVAPHAEIGYIDNTGTDWRNLLRFTENRKGILAAAPYVSNQALLANAGEIRGVQMRGILP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++ G + +I+G LA LG+ +G+K+ +++P G+VTP G+
Sbjct: 120 SEERKVVEYGDKMPAGKFEDLIPGEFDIILGVGLAEALGVEVGNKVTVITPEGNVTPAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K + V+G+ + + DN + +Q+A++ + L+ V+G+ + + DP
Sbjct: 180 VPRLKQFNVVGLVKTGVYEVDNSLAMTHIQDARVLYRLDKEVAGLRLKLADPQNAPALTA 239
Query: 243 NIV-RILGNGVVVIDWQQRYQIFFSCYE 269
++ + V V DW + +F E
Sbjct: 240 TLIPEAQRDTVWVRDWTYSNRSYFEAVE 267
>gi|213967348|ref|ZP_03395496.1| lipoprotein releasing system transmembrane protein LolE
[Pseudomonas syringae pv. tomato T1]
gi|301381686|ref|ZP_07230104.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. tomato Max13]
gi|302058444|ref|ZP_07249985.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. tomato K40]
gi|302131151|ref|ZP_07257141.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. tomato NCPPB 1108]
gi|213927649|gb|EEB61196.1| lipoprotein releasing system transmembrane protein LolE
[Pseudomonas syringae pv. tomato T1]
gi|331019548|gb|EGH99604.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. lachrymans str. M302278PT]
Length = 414
Score = 148 bits (372), Expect = 8e-34, Method: Composition-based stats.
Identities = 71/267 (26%), Positives = 123/267 (46%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+ +FIS S S IG+ +GV+A+IVV+SVMNGF+ +M R+L
Sbjct: 1 MFRPLPLFIGMRYTRAKRRKSFISFISMTSMIGLALGVLAMIVVLSVMNGFQREMSSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H VI P+ D++ +A P+V +PF + +S S +
Sbjct: 61 GMVPHAVI-AGAKPVDDWKPLAEAALKNPEVTAAVPFTDMEGMLSYKGSMQPIQISGVDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G++++ GV++G AR ++IGDK+ ++ P P G+
Sbjct: 120 ALEHEVSIVTQHITRGSLADLKPGEFGVVLGDLTARRFRLTIGDKLTLIVPEVSSAPGGI 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + TV+G+F++ + + AQ+ + V G+ + +KD +
Sbjct: 180 TPRLQRLTVVGIFKVGAELDGSMGLINIADAAQMQRWQPDQVQGVRLALKDLYKAPQVST 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I LG G DW FS +
Sbjct: 240 AIASGLGEGYHADDWTHTQGSLFSAMK 266
>gi|110833910|ref|YP_692769.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Alcanivorax borkumensis SK2]
gi|110647021|emb|CAL16497.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Alcanivorax borkumensis SK2]
Length = 414
Score = 148 bits (372), Expect = 8e-34, Method: Composition-based stats.
Identities = 71/267 (26%), Positives = 124/267 (46%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V RY + +N+FIS+ + IS +G+M+GV LI V+SVMNGF ++ R+L
Sbjct: 4 MFRPLSFYVGLRYTGARARNSFISVITLISALGLMLGVAVLITVLSVMNGFDRELQTRIL 63
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H + P+ D+Q +ANRLD + V PFV + ++ + ++
Sbjct: 64 GMVTH-LSVHGREPVQDWQALANRLDHHDQIEAVAPFVQLEGMLTHRGNVAGALINGIDP 122
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
++ G + + V++G LAR L +GDKI ++ P ++P G+
Sbjct: 123 EAERKVSIVGDFMHQGELDSLESGEFDVVLGYGLARRLDAQLGDKITLVLPEATISPAGV 182
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV G+FR+R Y+++ +A V G+ + + D +
Sbjct: 183 MPRFKRFTVTGIFRVRAEVDSL-YAYVNVADAAKLARQAGTVQGVRLKLNDLFSASNLGW 241
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + LG DW + + F +
Sbjct: 242 TLQQELGPNYYTSDWTRSHGNLFQAIK 268
>gi|289679734|ref|ZP_06500624.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. syringae FF5]
Length = 414
Score = 148 bits (372), Expect = 9e-34, Method: Composition-based stats.
Identities = 73/267 (27%), Positives = 123/267 (46%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+ +FIS S S IG+ +GV+A+IVV+SVMNGF+ +M R+L
Sbjct: 1 MFRPLPIFIGMRYTRAKRRKSFISFISMTSMIGLALGVLAMIVVLSVMNGFQREMSSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H VI P+ D++ +A+ P+V +PF + +S S +
Sbjct: 61 GMVPHAVIAGNT-PVDDWKPLADAALKNPEVTAAVPFTDMEGMLSYKGSMQPIQISGVDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G++ + GV++G AR +SIGDK+ ++ P P G+
Sbjct: 120 ALEHEVSIVTQHITRGSLEDLKPGEFGVVLGDITARRFRLSIGDKLTLIVPEVSSAPGGI 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + TV+G+F++ + + AQ+ N V G+ + +KD +
Sbjct: 180 TPRMQRLTVVGIFKVGAELDGSMGLINIADAAQMQRWQPNQVQGVRLALKDLYKAPQVST 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I LG G DW FS +
Sbjct: 240 AIAAGLGEGYRADDWTHTQGSLFSAMK 266
>gi|171463256|ref|YP_001797369.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Polynucleobacter necessarius subsp. necessarius STIR1]
gi|171192794|gb|ACB43755.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Polynucleobacter necessarius subsp. necessarius STIR1]
Length = 420
Score = 148 bits (372), Expect = 9e-34, Method: Composition-based stats.
Identities = 74/271 (27%), Positives = 130/271 (47%), Gaps = 8/271 (2%)
Query: 6 RFEVIVAWRYLFSNRKNA------FISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
E+ + RY S R+ F+S S IS G+ +GV +LIVV+SVMNGF++++
Sbjct: 5 PIELEIGLRYTRSKRRKTVGKRDGFLSFISGISTAGIALGVASLIVVISVMNGFQKEVRD 64
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV I L +++ +A ++ P V+ V P VS Q +S S +
Sbjct: 65 RMLSVLSHVEI-TAPDGLANWEPLALKVAAQPHVVGVAPMVSSQGLLSRESMMRGVAIRG 123
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + + G++ + GV +G LA +G +GD+IN++ P D+TP
Sbjct: 124 ILPSEESKVSDLPKQFVAGSIDDLKPGSFGVALGAQLAAIVGAHLGDRINLIVPESDLTP 183
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
G R + V+G+ +YD+ + M ++A L + SG+ V V D +
Sbjct: 184 AGAMPRMRILQVVGIVDSGHYEYDSSLAIMHWKDAAALLRLHDP-SGLRVKVDDMQRAPQ 242
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ I+ + VIDW + + +F+ ++
Sbjct: 243 VANELAAIVPQALWVIDWSKSNRNWFAAVQT 273
>gi|218768237|ref|YP_002342749.1| putative integral membrane protein [Neisseria meningitidis Z2491]
gi|9977668|sp|P57061|LOLC_NEIMA RecName: Full=Lipoprotein-releasing system transmembrane protein
lolC
gi|121052245|emb|CAM08570.1| putative integral membrane protein [Neisseria meningitidis Z2491]
gi|319410484|emb|CBY90845.1| lipoprotein-releasing system transmembrane protein LolC [Neisseria
meningitidis WUE 2594]
Length = 415
Score = 148 bits (372), Expect = 9e-34, Method: Composition-based stats.
Identities = 68/268 (25%), Positives = 133/268 (49%), Gaps = 2/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS E + RYL + ++N F+S + +S G+ +GV ALIVV+SVMNGF++++ ++L
Sbjct: 1 MFS-LEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVLSVMNGFQKEIRGQLL 59
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I D++ + + ++ P+VS QA ++ + +
Sbjct: 60 NVAPHAEIGYIDNTDTDWRNLLRFTENRKGILAAAPYVSNQALLANAGEIRGVQIRGILP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++ G + +I+G LA LG +G+K+ +++P G+VTP G+
Sbjct: 120 SEERKVVEYGDKMPAGKFEDLIPGEFDIILGVGLAEALGAEVGNKVTVITPEGNVTPAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV+G+ + + DN + +Q+A++ + L+ V+G+ + + DP
Sbjct: 180 VPRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLDKEVAGLRLKLADPQNAPALTA 239
Query: 243 NIV-RILGNGVVVIDWQQRYQIFFSCYE 269
++ + V V DW + +F E
Sbjct: 240 KLIPEAQRDTVWVRDWTFSNRSYFEAVE 267
>gi|242279992|ref|YP_002992121.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Desulfovibrio salexigens DSM 2638]
gi|242122886|gb|ACS80582.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Desulfovibrio salexigens DSM 2638]
Length = 409
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 90/269 (33%), Positives = 143/269 (53%), Gaps = 4/269 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+FE+ VA RYLF+ RKN FIS+ S + GV +GV ALIVV+ VMNGF D+ ++LG+
Sbjct: 1 MKFELFVALRYLFTLRKNNFISVISLFAVCGVALGVAALIVVIGVMNGFSTDLRDKILGV 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N HV++ L +Y + +R++ IP V V PF+ + +S VL + +
Sbjct: 61 NAHVIVTAYDGTLENYHHMTDRIEKIPGVTGVTPFIYSEVMLSSSGGVKGVVLRGVDAET 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRG--KGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
L G+V + G ++IG LAR LG+ +GD +N+LSP G T G
Sbjct: 121 AKGVLSLPGDMLSGSVDSLSKDGKLPEIVIGNQLARRLGLVLGDTVNLLSPSGTRTAAGF 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ + + V G+FR +YD+ + Y+S AQ + + VSG+E+ + D A++
Sbjct: 181 TPKVRVFKVGGIFRTGMYEYDSSLAYISNTSAQKLLGFKRDFVSGLEIRLADVYAVDNIG 240
Query: 242 ENIVRIL-GNGVVVIDWQQRYQIFFSCYE 269
+ + R L G V + +WQ+ F+ +
Sbjct: 241 KLLDRELAGYPVQIRNWQEMNSNLFAALK 269
>gi|146306640|ref|YP_001187105.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas mendocina ymp]
gi|145574841|gb|ABP84373.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Pseudomonas mendocina ymp]
Length = 414
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 67/267 (25%), Positives = 117/267 (43%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+N FIS S S IG+ +GV+A+IVV+SVMNGF+++M R+L
Sbjct: 1 MFRPLSIFIGARYTRAKRRNHFISFISLTSMIGLALGVLAMIVVLSVMNGFQKEMSSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H + P+ D++ +A + P V P+ + +S + +
Sbjct: 61 GMVPHA-MLYGAEPVADWRALAAKAMANPQVQAAAPYAELEGMLSHRGTMQPIQIHGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G+++N GV+IG AR G+ +GDK+ ++ P P G+
Sbjct: 120 AEEGKVSILPEHIRQGSLNNLQPGEFGVVIGDITARRFGLQVGDKLTLIIPELSSAPGGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + V +F++ + + A + E V GI + +KD + +
Sbjct: 180 TPRMQRLNVAAVFKVGAELDSSLALINVADAAAMQRLPEGTVPGIRLALKDLYQAPQVSK 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ LG DW FS +
Sbjct: 240 ALQAQLGADYRADDWTHTQGSLFSAMK 266
>gi|330954503|gb|EGH54763.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae Cit 7]
Length = 414
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 72/267 (26%), Positives = 123/267 (46%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+ +FIS S S IG+ +GV+A+IVV+SVMNGF+ +M R+L
Sbjct: 1 MFRPLPIFIGMRYTRAKRRKSFISFISMTSMIGLALGVLAMIVVLSVMNGFQREMSSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H VI P+ D++ +A+ P+V +PF + +S S +
Sbjct: 61 GMVPHAVI-AGTTPVDDWKPLADAALKNPEVTAAVPFTDMEGMLSYKGSMQPIQISGVDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G++ + GV++G AR ++IGDK+ ++ P P G+
Sbjct: 120 ALEHEVSIVTQHITRGSLEDLKPGEFGVVLGDITARRFRLTIGDKLTLIVPEVSSAPGGI 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + TV+G+F++ + + AQ+ N V G+ + +KD +
Sbjct: 180 TPRLQRLTVVGIFKVGAELDGSMGLINIADAAQMQRWQPNQVQGVRLALKDLYKAPQVST 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I LG G DW FS +
Sbjct: 240 AIAAGLGEGYRADDWTHTQGSLFSAMK 266
>gi|313108275|ref|ZP_07794307.1| putative lipoprotein releasing system, permease protein
[Pseudomonas aeruginosa 39016]
gi|310880809|gb|EFQ39403.1| putative lipoprotein releasing system, permease protein
[Pseudomonas aeruginosa 39016]
Length = 414
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 65/267 (24%), Positives = 123/267 (46%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RY + R+N +IS S S IG+ +GV+A+I+V+SVMNGF+++M R+L
Sbjct: 1 MFRPLPFFIGLRYTRAKRRNHYISFISLTSMIGLALGVLAMIIVLSVMNGFQKEMRTRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I PL D+Q +AN +V+ PF Q +S + ++
Sbjct: 61 GMVPHATI-SATQPLDDWQTVANAALRHREVVGAAPFAELQGMLSYKGNMLPVLVNGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G++ + G+++G+ AR +++GDK+ ++ P P G+
Sbjct: 120 QEERKVSIIGEHIVQGSLDDLKPGEFGIVLGEITARRFHVNVGDKLTLIVPEATSAPGGI 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + +T++ +F++ ++ + QL V + + +KD +
Sbjct: 180 TPRMQRFTIVALFKVGAELDNSLALIDIADAGQLLRLQPGQVPSVRLELKDLYQSPQVAA 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+V+ LG G DW + F+ +
Sbjct: 240 KVVKELGQGFRSSDWTRAQGSLFNAMK 266
>gi|330897610|gb|EGH29029.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. japonica str. M301072PT]
Length = 414
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 73/267 (27%), Positives = 123/267 (46%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+ +FIS S S IG+ +GV+A+IVV+SVMNGF+ +M R+L
Sbjct: 1 MFRPLPIFIGMRYTRAKRRKSFISFISMTSMIGLALGVLAMIVVLSVMNGFQREMSSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H VI P+ D++ +A+ P+V +PF + +S S +
Sbjct: 61 GMVPHAVIAGNT-PVDDWKPLADAALKNPEVTAAVPFTDMEGMLSYKGSMQPIQISGVDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G++ + GV++G AR +SIGDK+ ++ P P G+
Sbjct: 120 ALEHEVSIVTQHITRGSLEDLKPGEFGVVLGDITARRFRLSIGDKLTLIVPEVSSAPGGI 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + TV+G+F++ + + AQ+ N V G+ + +KD +
Sbjct: 180 TPRMQRLTVVGIFKVGAELDGSMGLIHIADAAQMQRWQPNQVQGVRLALKDLYKAPQVST 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I LG G DW FS +
Sbjct: 240 AIAASLGEGYRADDWTHTQGSLFSAMK 266
>gi|325277323|ref|ZP_08142948.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas sp. TJI-51]
gi|324097513|gb|EGB95734.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas sp. TJI-51]
Length = 413
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 67/267 (25%), Positives = 114/267 (42%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+N FIS S S IG+ +GV+A+IVV+SVMNGF+ +M R+L
Sbjct: 1 MFRPLPIFIGARYTRAKRRNHFISFISMTSMIGLSLGVLAMIVVLSVMNGFQREMSSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H PL D+ +A+ P V+ P + +S + +
Sbjct: 61 GLVPHA-AILGVQPLDDWHKVADAALQNPAVMAAAPITEMEGMLSYKGAMQPIQVSGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G + + GV+IG+ AR ++ GDK+ ++ P P G+
Sbjct: 120 AEESKVSIVGQHIVQGRLQDLQPGEFGVVIGELTARRFRLNTGDKLTLIVPEISKEPGGI 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + TV+G+F++ + Q+ V G+ + + D A + +
Sbjct: 180 TPRMQRLTVVGIFKVGAELDGSQAYIHMADAGQMQRWAPGQVQGVRLKLHDLYAAPQVSK 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I LG+ DW FS +
Sbjct: 240 AIAAGLGDAYRADDWSHTQGSLFSAMK 266
>gi|288958963|ref|YP_003449304.1| lipoprotein-releasing system permease protein [Azospirillum sp.
B510]
gi|288911271|dbj|BAI72760.1| lipoprotein-releasing system permease protein [Azospirillum sp.
B510]
Length = 415
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 95/268 (35%), Positives = 151/268 (56%), Gaps = 3/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
IF+ FE +VA RYL + R+ FIS+ + S +G+ +GV LI+VM+VMNGFR +++ RVL
Sbjct: 2 IFNAFERMVAMRYLRARRQEGFISVIAGFSLLGIALGVATLIIVMAVMNGFRAELLGRVL 61
Query: 63 GINGHV-VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
G+NGH+ V + PL D+ +A +L P V+ V P V GQA VS V+
Sbjct: 62 GLNGHLNVYSSRGGPLPDFDILAGKLRDTPGVVNVTPTVEGQALVSVRGVASGAVIRGVR 121
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ ++ + + S D V IG +A+ LG+++GD+I +++P G+VT G
Sbjct: 122 AEDF--KVRPTLASNIVRGSADEFGEDRVAIGVRMAQRLGLTVGDQITLIAPQGNVTAFG 179
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
R +SY + +F + +YDN +++ L+EAQ +F +AV+ +EVFV DP I
Sbjct: 180 TVPRMRSYPIGAIFDVGMFEYDNSFIFLPLEEAQAFFRTGDAVTSLEVFVSDPMQIAAAR 239
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ ++ V+DWQQ FF+ +
Sbjct: 240 AAVQSVVAGEGRVVDWQQSNASFFTALQ 267
>gi|104782716|ref|YP_609214.1| lipoprotein releasing system transmembrane protein LolE
[Pseudomonas entomophila L48]
gi|95111703|emb|CAK16427.1| Lipoprotein releasing system transmembrane protein LolE
[Pseudomonas entomophila L48]
Length = 414
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 68/267 (25%), Positives = 119/267 (44%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+N FIS S S IG+ +GV+A+IVV+SVMNGF+ +M RVL
Sbjct: 1 MFRPLPLFIGARYTRAKRRNHFISFISMTSMIGLSLGVLAMIVVLSVMNGFQREMSSRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H PL D++ +A+ + P V+ P + +S + +
Sbjct: 61 GLVPHA-SILGEQPLDDWRKVASAAEGSPAVLAAAPLTELEGMLSYKGAMQPIQVAGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G++ + GV+IG+ AR ++ GDK+ ++ P P G+
Sbjct: 120 AEEGKVSIVTQHIVQGSLQDLVPGEYGVVIGELTARRFRLNTGDKLTLIVPEISKEPGGI 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + TV+G+F++ + ++ V G+ + ++D A + +
Sbjct: 180 TPRMQRLTVVGIFKVGAELDGSQAYIHVADAGEMQRWAPGQVQGVRLKLQDLYAAPQVSK 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I LG G DW FS +
Sbjct: 240 AIAAGLGEGYRADDWSHTQGSLFSAMK 266
>gi|304387503|ref|ZP_07369692.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Neisseria meningitidis ATCC 13091]
gi|261392503|emb|CAX50054.1| lipoprotein-releasing system transmembrane protein LolC [Neisseria
meningitidis 8013]
gi|304338390|gb|EFM04511.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Neisseria meningitidis ATCC 13091]
Length = 415
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 68/268 (25%), Positives = 133/268 (49%), Gaps = 2/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS E + RYL + ++N F+S + +S G+ +GV ALIVV+SVMNGF++++ ++L
Sbjct: 1 MFS-LEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVLSVMNGFQKEIRGQLL 59
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I D++ + + ++ P+VS QA ++ + +
Sbjct: 60 NVAPHAEIGYIDNTDTDWRNLLRFTENRKGILAAAPYVSNQALLANAGEIRGVQMRGILP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++ G + +I+G LA LG +G+K+ +++P G+VTP G+
Sbjct: 120 SEERKVVEYGDKMPAGKFEDLIPGEFDIILGVGLAEALGAEVGNKVTVITPEGNVTPAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV+G+ + + DN + +Q+A++ + L+ V+G+ + + DP
Sbjct: 180 VPRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLDKEVAGLRLKLADPQNAPALTA 239
Query: 243 NIV-RILGNGVVVIDWQQRYQIFFSCYE 269
++ + V V DW + +F E
Sbjct: 240 TLIPEAQRDTVWVRDWTFSNRSYFEAVE 267
>gi|261380149|ref|ZP_05984722.1| lipoprotein releasing system, permease protein [Neisseria subflava
NJ9703]
gi|284796986|gb|EFC52333.1| lipoprotein releasing system, permease protein [Neisseria subflava
NJ9703]
Length = 416
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 68/268 (25%), Positives = 130/268 (48%), Gaps = 2/268 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ E + RYL + ++N F+S + IS +G+ +GV ALIVV+SVMNGF++++ ++L
Sbjct: 1 MASLETWIGLRYLRAKKRNGFMSFITMISIVGIALGVTALIVVLSVMNGFQKEIRGQLLN 60
Query: 64 INGH-VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + +Q + + +V+ P+VS QA ++ + +
Sbjct: 61 VAPHAEIGYYDVGSAPGWQSLREFVKGKKEVLASAPYVSDQALLANAGEVRGVQIRGILP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + + G+ + +I+G+ LA LG IG K+ +++P G+VTP G+
Sbjct: 121 SEEKNVVDYGKDMPAGSFDDLKPGEFDIILGQGLAEALGTEIGGKVTVITPEGNVTPAGV 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK-TH 241
R K + V+G+ + + DN + +++AQ+ + L V G+ + + DP
Sbjct: 181 VPRLKQFNVVGVVKTGVYEVDNTLAMTHIKDAQVLYRLGENVGGLRLRLADPQNAPSFIA 240
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I + V V DW + +F E
Sbjct: 241 KLIPDAKKDEVWVRDWTFNNRSYFEAVE 268
>gi|114320596|ref|YP_742279.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Alkalilimnicola ehrlichii MLHE-1]
gi|114226990|gb|ABI56789.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Alkalilimnicola ehrlichii MLHE-1]
Length = 415
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 76/268 (28%), Positives = 134/268 (50%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F E + RY + R+N FIS S S IG+M+GV ALIVV+SVMNGF ++ +R+L
Sbjct: 1 MFKPLECWIGLRYTGARRRNHFISFISLSSIIGIMLGVTALIVVLSVMNGFERELRERIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H + P+ D+Q + + P V PFV G+A ++ ++ +
Sbjct: 61 GMISHATVSAWGEPMEDWQAVREAVLSHPRVEGAAPFVEGEAMITRGGEVSGVLVQGVVP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + G + + G+++G +LAR LG+ GD++ I++P V+ G+
Sbjct: 121 ALEGEVSEVAHQLVEGRLDDLRPGEFGIVLGSELARTLGVRGGDRVTIVAPEARVSVAGI 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + +TV+G+F + YD G+ + +++A F SGI V + A +
Sbjct: 181 TPRLRRFTVVGVFEVGMYQYDKGIALVHMEDAARLFRAGEGASGIRVRFDELLAAPRLAT 240
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ +L V DW + ++ FF ++
Sbjct: 241 EVAEMLPGVYSVRDWTRHHENFFRAVQT 268
>gi|325132581|gb|EGC55274.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Neisseria meningitidis M6190]
gi|325138354|gb|EGC60923.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Neisseria meningitidis ES14902]
gi|325142494|gb|EGC64898.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Neisseria meningitidis 961-5945]
gi|325198368|gb|ADY93824.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Neisseria meningitidis G2136]
Length = 415
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 68/268 (25%), Positives = 133/268 (49%), Gaps = 2/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS E + RYL + ++N F+S + +S G+ +GV ALIVV+SVMNGF++++ ++L
Sbjct: 1 MFS-LEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVLSVMNGFQKEIRGQLL 59
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I D++ + + ++ P+VS QA ++ + +
Sbjct: 60 NVAPHAEIGYIDNTDTDWRNLLRFTENRKGILAAAPYVSNQALLANAGEIRGVQMRGILP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++ G + +I+G LA LG +G+K+ +++P G+VTP G+
Sbjct: 120 SEERKVVEYGDKMPAGKFEDLIPGEFDIILGVGLAEALGAEVGNKVTVITPEGNVTPAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV+G+ + + DN + +Q+A++ + L+ V+G+ + + DP
Sbjct: 180 VPRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLDKEVAGLRLKLADPQNAPALTA 239
Query: 243 NIV-RILGNGVVVIDWQQRYQIFFSCYE 269
++ + V V DW + +F E
Sbjct: 240 TLIPEAQRDAVWVRDWTYNNRSYFEAVE 267
>gi|308389328|gb|ADO31648.1| putative integral membrane protein [Neisseria meningitidis
alpha710]
gi|325136279|gb|EGC58887.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Neisseria meningitidis M0579]
gi|325202071|gb|ADY97525.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Neisseria meningitidis M01-240149]
gi|325208175|gb|ADZ03627.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Neisseria meningitidis NZ-05/33]
Length = 415
Score = 147 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 68/268 (25%), Positives = 133/268 (49%), Gaps = 2/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS E + RYL + ++N F+S + +S G+ +GV ALIVV+SVMNGF++++ ++L
Sbjct: 1 MFS-LEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVLSVMNGFQKEIRGQLL 59
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I D++ + + ++ P+VS QA ++ + +
Sbjct: 60 NVAPHAEIGYIDNTDTDWRNLLRFTENRKGILAAAPYVSNQALLANAGEIRGVQMRGILP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++ G + +I+G LA LG +G+K+ +++P G+VTP G+
Sbjct: 120 SEERKVVEYGDKMPAGKFEDLIPGEFDIILGVGLAEALGAEVGNKVTVITPEGNVTPAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV+G+ + + DN + +Q+A++ + L+ V+G+ + + DP
Sbjct: 180 VPRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLDKEVAGLRLKLADPQNAPALTA 239
Query: 243 NIV-RILGNGVVVIDWQQRYQIFFSCYE 269
++ + V V DW + +F E
Sbjct: 240 KLIPEAQRDTVWVRDWTFSNRSYFEAVE 267
>gi|51245480|ref|YP_065364.1| lipoprotein releasing system transmembrane protein (LolC)
[Desulfotalea psychrophila LSv54]
gi|50876517|emb|CAG36357.1| related to lipoprotein releasing system transmembrane protein
(LolC) [Desulfotalea psychrophila LSv54]
Length = 410
Score = 147 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 89/275 (32%), Positives = 149/275 (54%), Gaps = 9/275 (3%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + +E ++ RYL + K FIS+ S IS G+ +GV+ALIVVM+V +GF + +
Sbjct: 1 MPM---YEWFISLRYLRAKHKQRFISLISLISIAGITVGVIALIVVMAVYSGFTTSLRDQ 57
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+LG+N H+++QQ+ + DY + + +P+V P++ Q +S GGSGV++RG
Sbjct: 58 ILGVNAHIIVQQQGGKMYDYLNVRKEIIALPNVRGATPYLYAQTLLSSPRGGGSGVVLRG 117
Query: 121 ISNSDFSYLQNSFSRFYGNVSND----FDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
I + + + ++ R +IIGK+LA+NL + GDK+ ++SP G
Sbjct: 118 IDPTTAVGVLGLPEQMIAGKVDNLTDKTTRVPNIIIGKNLAKNLRVGQGDKVRLISPSGP 177
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKD--P 234
+TPMG+ + + V G+F +YD+ + YMS+ Q + + GIEV V
Sbjct: 178 LTPMGVIPKITTCQVSGIFETGMYEYDSTLAYMSIANTQNFLASGDLAHGIEVTVDHNKL 237
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
D+ ++ I + LG+ VV DW Q Q F+ ++
Sbjct: 238 DSADQIAATIRKSLGSLYVVRDWMQMNQNLFAAFK 272
>gi|218888078|ref|YP_002437399.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218759032|gb|ACL09931.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 417
Score = 147 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 78/277 (28%), Positives = 127/277 (45%), Gaps = 12/277 (4%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
FE+ VA RYLF+ R+ FIS+ S S +GV +GV +LIVV+ VMNGF D+ ++LG
Sbjct: 1 MSFELFVALRYLFARRRQTFISVISVTSILGVALGVASLIVVLGVMNGFTTDLRDKILGA 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N H ++ + D ++ + G G+++RGI
Sbjct: 61 NAHGIVMSADRSGLGDAPQLIDKIRQVDGVRGATPFIYSEVMLSTPHGVKGLVLRGIDPQ 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRG----------KGVIIGKDLARNLGISIGDKINILSPY 174
+ S D GVIIG +LA+ LG+ +G ++N+LSP
Sbjct: 121 SAPSVLGILSNMTKGSVADLAPHTGADGAYSGPPGVIIGDELAQRLGVVVGSRVNLLSPA 180
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKD 233
G T G R + + V+G+F +YD+ + ++SL A+ L + VSG+E+ V D
Sbjct: 181 GQKTSAGFAPRIRPFMVVGVFSTGMFEYDSSLGFVSLDAARDVLGLPDGAVSGVELAVTD 240
Query: 234 PDAIEKTHENIVRIL-GNGVVVIDWQQRYQIFFSCYE 269
++ E + R + G + W + F+ +
Sbjct: 241 VYKADQVAERVTRAVGGYPLYTRHWMEMNANLFAALK 277
>gi|241758822|ref|ZP_04756935.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Neisseria flavescens SK114]
gi|241321030|gb|EER57243.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Neisseria flavescens SK114]
Length = 416
Score = 147 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 69/268 (25%), Positives = 131/268 (48%), Gaps = 2/268 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ E + RYL + ++N F+S + IS +G+ +GV ALIVV+SVMNGF++++ ++L
Sbjct: 1 MASLETWIGLRYLRAKKRNGFMSFITMISIVGIALGVTALIVVLSVMNGFQKEIRGQLLN 60
Query: 64 INGH-VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + D+Q + + +V+ P+VS QA ++ + +
Sbjct: 61 VAPHAEIGYYDVGSAPDWQNLREFVKGKKEVLASAPYVSDQALLANAGEVRGVQIRGILP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + + G+ + +I+G+ LA LG IG K+ +++P G+VTP G+
Sbjct: 121 SEEKNVVDYGKDMPAGSFDDLKPGEFDIILGQGLAEALGTEIGGKVTVITPEGNVTPAGV 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK-TH 241
R K + V+G+ + + DN + +++AQ+ + L V G+ + + DP
Sbjct: 181 VPRLKQFNVVGVVKTGVYEVDNTLAMTHIKDAQVLYRLGENVGGLRLRLADPQNAPSFIA 240
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I + V V DW + +F E
Sbjct: 241 KLIPDAKKDEVWVRDWTFNNRSYFEAVE 268
>gi|114776311|ref|ZP_01451356.1| lipoprotein releasing system trasmembrane protein [Mariprofundus
ferrooxydans PV-1]
gi|114553141|gb|EAU55539.1| lipoprotein releasing system trasmembrane protein [Mariprofundus
ferrooxydans PV-1]
Length = 405
Score = 147 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 87/261 (33%), Positives = 134/261 (51%), Gaps = 3/261 (1%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
++A RYL S R F+S+ S+ S IG+ IGVM LIVV+SVMNG ++ ++LG + HV
Sbjct: 1 MLARRYLRSRRSERFVSLISWSSGIGIAIGVMTLIVVLSVMNGAAVEIRDKILGFSSHVD 60
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
IQ L + + + V++V P++S Q S +G V +
Sbjct: 61 IQGPDESLHGWHAWLDTASRLDGVVRVAPYISTQVLAS---AGTRAVGAILKGVDPANSS 117
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
+ + G V+IGKDLA LG+++GDK+ ++SP G ++P G R +++
Sbjct: 118 EIADHVVQGRFIKTDKSPFQVVIGKDLAHKLGLTVGDKVRLMSPSGGISPSGATPRMRAF 177
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
V+G+F F +YD GM+ L Q + N ++GIEVF+KD D L
Sbjct: 178 DVVGIFDSGFYEYDVGMIITPLSAVQRLNRMGNGITGIEVFLKDRDQASAVAAMAREQLP 237
Query: 250 NGVVVIDWQQRYQIFFSCYES 270
G V DWQ R++ FF ++
Sbjct: 238 AGAWVTDWQHRHRSFFKALKT 258
>gi|28869314|ref|NP_791933.1| lipoprotein releasing system transmembrane protein LolE
[Pseudomonas syringae pv. tomato str. DC3000]
gi|28852555|gb|AAO55628.1| lipoprotein releasing system transmembrane protein LolE
[Pseudomonas syringae pv. tomato str. DC3000]
Length = 427
Score = 147 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 71/267 (26%), Positives = 123/267 (46%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+ +FIS S S IG+ +GV+A+IVV+SVMNGF+ +M R+L
Sbjct: 14 MFRPLPLFIGMRYTRAKRRKSFISFISMTSMIGLALGVLAMIVVLSVMNGFQREMSSRIL 73
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H VI P+ D++ +A P+V +PF + +S S +
Sbjct: 74 GMVPHAVI-AGAKPVDDWKPLAEAALKNPEVTAAVPFTDMEGMLSYKGSMQPIQISGVDP 132
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G++++ GV++G AR ++IGDK+ ++ P P G+
Sbjct: 133 ALEHEVSIVTQHITRGSLADLKPGEFGVVLGDLTARRFRLTIGDKLTLIVPEVSSAPGGI 192
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + TV+G+F++ + + AQ+ + V G+ + +KD +
Sbjct: 193 TPRLQRLTVVGIFKVGAELDGSMGLINIADAAQMQRWQPDQVQGVRLALKDLYKAPQVST 252
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I LG G DW FS +
Sbjct: 253 AIASGLGEGYHADDWTHTQGSLFSAMK 279
>gi|254785842|ref|YP_003073271.1| lipoprotein-releasing system, transmembrane protein, LolE
[Teredinibacter turnerae T7901]
gi|237686773|gb|ACR14037.1| lipoprotein-releasing system, transmembrane protein, LolE
[Teredinibacter turnerae T7901]
Length = 418
Score = 147 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 67/264 (25%), Positives = 128/264 (48%), Gaps = 2/264 (0%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
+ + RY+ + R+N FIS S + G+ +GV ALIVV+SVMNGF ++ +R+L +
Sbjct: 8 SLPLFIGLRYIRAKRRNGFISFVSLFALGGMALGVFALIVVLSVMNGFDHELKQRLLRVV 67
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
H + PL ++Q + ++ P++ P++ GQ +S + + +
Sbjct: 68 PHGFL-STSTPLHNWQALGEKIASTPELKAFAPYIEGQGLLSYAGNVKPIQIEGIDPQYE 126
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ + G+++ G+++G +AR LG++ GDK+++ P VTP G+ R
Sbjct: 127 SAISIVNQFMLVGDMAELKPGEYGIVMGSLIARFLGVTTGDKVSVTLPQVSVTPAGIFPR 186
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+K +T++G+F + + + +A+ F AV G+ + D + +++
Sbjct: 187 AKRFTLVGVFEAGAQVDQY-LTLIHIDDAKTLFRTGGAVDGLHLKFDDIYRAPEAVQSLA 245
Query: 246 RILGNGVVVIDWQQRYQIFFSCYE 269
LG+G V DW Q F +
Sbjct: 246 SRLGSGYVAKDWSQTQGSLFQAVK 269
>gi|330502577|ref|YP_004379446.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas mendocina NK-01]
gi|328916863|gb|AEB57694.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas mendocina NK-01]
Length = 414
Score = 147 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 70/267 (26%), Positives = 119/267 (44%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+N FIS S S IG+ +GV+A+IVV+SVMNGF+++M R+L
Sbjct: 1 MFRPLSIFIGARYTRAKRRNHFISFISLTSMIGLALGVLAMIVVLSVMNGFQKEMSSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H + P+VD++ +A + P V P+ + +S +
Sbjct: 61 GMVPHA-MLYGAEPVVDWRALAAKAMANPQVQAAAPYAELEGMLSHRGLMQPIQIHGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G++SN GV+IG AR G+ +GDK+ ++ P P G+
Sbjct: 120 AEEGKVSILPEHIRQGSLSNLLPGEFGVVIGDITARRFGLQVGDKLTLIIPEPSSAPGGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + V +F++ + + A + E V GI + +KD + +
Sbjct: 180 TPRMQRLNVAAVFKVGAELDSSLALINVADAAAMQRLPEGTVPGIRLALKDLYQAPQVSK 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ LG G DW FS +
Sbjct: 240 ALLAELGAGYRADDWTHTQGSLFSAMK 266
>gi|319638359|ref|ZP_07993121.1| lipoprotein-releasing system transmembrane protein lolC [Neisseria
mucosa C102]
gi|317400108|gb|EFV80767.1| lipoprotein-releasing system transmembrane protein lolC [Neisseria
mucosa C102]
Length = 416
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 67/268 (25%), Positives = 129/268 (48%), Gaps = 2/268 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ E + RYL + ++N F+S + IS G+ +GV ALIVV+SVMNGF++++ ++L
Sbjct: 1 MASLETWIGLRYLRAKKRNGFMSFITMISIAGIALGVTALIVVLSVMNGFQKEIRGQLLN 60
Query: 64 INGH-VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + +Q + + +V+ P+VS QA ++ + +
Sbjct: 61 VAPHAEIGYYDVGSAPGWQNLREFVKGKKEVLASAPYVSDQALLANAGEVRGVQIRGILP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + + G+ + +I+G+ LA LG +G K+ +++P G+VTP G+
Sbjct: 121 SEEKNVVDYGKDMPAGSFDDLKPGEFDIILGQGLAEALGTELGGKVTVITPEGNVTPAGV 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK-TH 241
R K + V+G+ + + DN + +++AQ+ + L V G+ + + DP
Sbjct: 181 VPRLKQFNVVGVVKTGVYEVDNTLAMTHIKDAQVLYRLGENVGGLRLRLADPQNAPSFIA 240
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I + V V DW + +F E
Sbjct: 241 KLIPDAKKDEVWVRDWTFNNRSYFEAVE 268
>gi|330878582|gb|EGH12731.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. morsprunorum str. M302280PT]
Length = 414
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 71/267 (26%), Positives = 123/267 (46%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+ +FIS S S IG+ +GV+A+IVV+SVMNGF+ +M R+L
Sbjct: 1 MFRPLPIFIGMRYTRAKRRKSFISFISMTSMIGLALGVLAMIVVLSVMNGFQREMSSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H VI P+ D++ +A P+V +PF + +S S +
Sbjct: 61 GMVPHAVIAGTK-PVDDWEPLAAAALKNPEVTAAVPFTDMEGMLSYKGSMQPIQISGVDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G++++ GV++G AR ++IGDK+ ++ P P G+
Sbjct: 120 ALEHEVSIVTQHITRGSLADLKPGEFGVVLGDLTARRFRLTIGDKLTLIVPEVSSAPGGI 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + TV+G+F++ + + AQ+ + V G+ + +KD +
Sbjct: 180 TPRLQRLTVVGIFKVGAELDGSMGLINIADAAQMQRWQPDQVQGVRLALKDLYKAPQVST 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I LG G DW FS +
Sbjct: 240 AIAAGLGEGYHADDWTHTQGSLFSAMK 266
>gi|319943691|ref|ZP_08017972.1| lipoprotein ABC superfamily ATP binding cassette transporter,
permease protein [Lautropia mirabilis ATCC 51599]
gi|319742924|gb|EFV95330.1| lipoprotein ABC superfamily ATP binding cassette transporter,
permease protein [Lautropia mirabilis ATCC 51599]
Length = 434
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 79/271 (29%), Positives = 140/271 (51%), Gaps = 6/271 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRK----NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMI 58
+ S FE V RY S ++ N FIS S +S G+ +GV ALI+VMSVMNGF++++
Sbjct: 18 LLSPFEWFVGLRYTRSGKRAGKKNGFISFISTLSVAGIALGVAALIIVMSVMNGFQKEVR 77
Query: 59 KRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
R+L + HV + +++Q +A +L V PFVSGQ +S + ++
Sbjct: 78 DRMLSVLSHVEV-YHVDGPLNWQPLAEKLRGHDHVTGAAPFVSGQVVISRNQTVRGALVR 136
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
+ + + G++S G++IG+ LA LG+ GD++ +++P G V+
Sbjct: 137 GIVPAIEPQVSDMAGQVVEGSLSALTPGSFGIVIGRVLANQLGLIEGDRLALIAPQGTVS 196
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
P G+ R K +TV G+F +YD+ ++ +L +A +F A+ G+ + + D
Sbjct: 197 PAGVVPRMKQFTVRGIFESGHYEYDSTLILANLDDAATFFRTGGAM-GLRLRLDDMQRAP 255
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + LG+G V DW +++F+ +
Sbjct: 256 EIGQQLGAELGDGYQVRDWSLENRVWFAAVQ 286
>gi|194098671|ref|YP_002001733.1| LolC [Neisseria gonorrhoeae NCCP11945]
gi|260440468|ref|ZP_05794284.1| LolC [Neisseria gonorrhoeae DGI2]
gi|268594828|ref|ZP_06128995.1| lipoprotein-releasing system transmembrane protein lolC [Neisseria
gonorrhoeae 35/02]
gi|268599046|ref|ZP_06133213.1| lipoprotein-releasing system transmembrane protein lolC [Neisseria
gonorrhoeae MS11]
gi|268684350|ref|ZP_06151212.1| lipoprotein-releasing system transmembrane protein lolC [Neisseria
gonorrhoeae SK-92-679]
gi|268686671|ref|ZP_06153533.1| lipoprotein-releasing system transmembrane protein lolC [Neisseria
gonorrhoeae SK-93-1035]
gi|291043769|ref|ZP_06569485.1| lipoprotein-releasing system transmembrane protein lolC [Neisseria
gonorrhoeae DGI2]
gi|193933961|gb|ACF29785.1| LolC [Neisseria gonorrhoeae NCCP11945]
gi|268548217|gb|EEZ43635.1| lipoprotein-releasing system transmembrane protein lolC [Neisseria
gonorrhoeae 35/02]
gi|268583177|gb|EEZ47853.1| lipoprotein-releasing system transmembrane protein lolC [Neisseria
gonorrhoeae MS11]
gi|268624634|gb|EEZ57034.1| lipoprotein-releasing system transmembrane protein lolC [Neisseria
gonorrhoeae SK-92-679]
gi|268626955|gb|EEZ59355.1| lipoprotein-releasing system transmembrane protein lolC [Neisseria
gonorrhoeae SK-93-1035]
gi|291012232|gb|EFE04221.1| lipoprotein-releasing system transmembrane protein lolC [Neisseria
gonorrhoeae DGI2]
gi|317164273|gb|ADV07814.1| LolC [Neisseria gonorrhoeae TCDC-NG08107]
Length = 415
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 68/268 (25%), Positives = 132/268 (49%), Gaps = 2/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS E + RYL + ++N F+S + +S G+ +GV ALIVV+SVMNGF++++ ++L
Sbjct: 1 MFS-LEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVLSVMNGFQKEIRGQLL 59
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I D++ + + ++ P+VS QA ++ + +
Sbjct: 60 NVAPHAEIGYIDNTDTDWRNLLRFAENRKGILAAAPYVSNQALLANAGEIRGVQIRGILP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++ G + +I+G LA LG +G K+ +++P G+VTP G+
Sbjct: 120 SEERKVVEYGDKMPAGKFEDLIPGEFDIILGVGLAEALGAEVGGKVTVITPEGNVTPAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV+G+ + + DN + +Q+A++ + L+ V+G+ + + DP
Sbjct: 180 VPRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLDKEVAGLRLKLADPQNAPALTA 239
Query: 243 NIV-RILGNGVVVIDWQQRYQIFFSCYE 269
++ + V V DW + +F E
Sbjct: 240 TLIPEAQRDTVWVRDWTYSNRSYFEAVE 267
>gi|170720859|ref|YP_001748547.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas putida W619]
gi|169758862|gb|ACA72178.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Pseudomonas putida W619]
Length = 413
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 66/267 (24%), Positives = 113/267 (42%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+N FIS S S IG+ +GV+A+IVV+SVMNGF+ +M R+L
Sbjct: 1 MFRPLPLFIGARYTRAKRRNHFISFISMTSMIGLSLGVLAMIVVLSVMNGFQREMSSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H PL D++ A+ P V+ P + +S + +
Sbjct: 61 GLVPHA-SILGVQPLGDWRKAADAALQNPAVMAAAPITEMEGMLSYKGAMQPIQVSGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G + GV+IG+ AR ++ GDK+ ++ P P G+
Sbjct: 120 AEEGKVSIVGQHIVQGRLQALQPGEYGVVIGELTARRFRLNTGDKLTLIVPEISKEPGGI 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + TV+G+F++ + ++ V G+ + + D A + +
Sbjct: 180 TPRMQRLTVVGIFKVGAELDGSQAYMHVADAGEMQRWSPGQVQGVRLKLHDLYAAPQVSK 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I LG+ DW FS +
Sbjct: 240 AIAASLGDAYRADDWSHTQGSLFSAMK 266
>gi|148548792|ref|YP_001268894.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas putida F1]
gi|148512850|gb|ABQ79710.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Pseudomonas putida F1]
Length = 413
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 68/267 (25%), Positives = 115/267 (43%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+N FIS S S IG+ +GV+A+IVV+SVMNGF+ +M R+L
Sbjct: 1 MFRPLPIFIGARYTRAKRRNHFISFISMTSMIGLSLGVLAMIVVLSVMNGFQREMSSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H PL D+ +A+ P V+ V P + +S + +
Sbjct: 61 GLVPHA-AILGVQPLDDWHKVADAAMKNPAVMAVAPITEMEGMLSYKGAMQPIQVGGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G + GV+IG+ AR ++ GDK+ ++ P P G+
Sbjct: 120 AEEGKVSIVGQHIVQGRLQGLQPGEFGVVIGELTARRFRLNTGDKLTLIVPEISKEPGGI 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + TV+G+F++ + A++ V G+ + + D A + +
Sbjct: 180 TPRMQRLTVVGIFKVGAELDGSQAYIHVADAAEMQRWAPGQVQGVRLKLHDLYAAPQVAK 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I LG+ DW FS +
Sbjct: 240 AIAAGLGDAYRADDWSHTQGSLFSAMK 266
>gi|237797697|ref|ZP_04586158.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. oryzae str. 1_6]
gi|331020547|gb|EGI00604.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. oryzae str. 1_6]
Length = 414
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 71/267 (26%), Positives = 123/267 (46%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+ +FIS S S IG+ +GV+A+IVV+SVMNGF+ +M R+L
Sbjct: 1 MFRPLPIFIGMRYTRAKRRKSFISFISMTSMIGLALGVLAMIVVLSVMNGFQREMSSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H VI P+ D++ +A P+V +PF + +S S +
Sbjct: 61 GMVPHAVIAGNT-PVGDWKPLAAAALKNPEVTAAVPFTDMEGMLSYKGSMQPIQISGVDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G++ + GV++G AR ++IGDK+ ++ P P G+
Sbjct: 120 ALEHEVSIVTQHITRGSIEDLKPGEFGVVLGDLTARRFRLTIGDKLTLIVPEVSSAPGGI 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + TV+G+F++ + + AQ+ + V G+ + +KD +
Sbjct: 180 TPRMQRLTVVGIFKVGAELDGSMGLINIADAAQMQRWQPDQVQGVRLALKDLYKAPQVST 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I LG+G DW FS +
Sbjct: 240 AIAAGLGDGYHADDWTHTQGSLFSAMK 266
>gi|83592913|ref|YP_426665.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Rhodospirillum rubrum ATCC 11170]
gi|83575827|gb|ABC22378.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Rhodospirillum rubrum ATCC 11170]
Length = 417
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 94/269 (34%), Positives = 148/269 (55%), Gaps = 3/269 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
IF+ FE ++A RYL + RK F+S+ + S G+ +GV LI+VM+VMNGFRED++ R+
Sbjct: 2 IFNAFERMMAGRYLRARRKEGFVSVIAGFSLAGIGLGVATLIIVMAVMNGFREDLMGRIF 61
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+NGH+ + +Y ++DY + + IP V V P V GQ ++ + G LVRG+
Sbjct: 62 GLNGHLTVLGQYDVMMDYDRATDIIRGIPGVRAVTPTVEGQVMLTD-NGRSVGGLVRGVR 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
D + +D ++IG LA N G+ +GDK+ ++SP G VT MG
Sbjct: 121 PEDLRQRPMLANAVIAGSLDDLRGQDSIMIGNRLAENFGLRVGDKLTLVSPKGKVTAMGT 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
R ++YTV +F + +YD+ V++ L+ AQ YF + V+ +EV V PD + +
Sbjct: 181 VPRVRAYTVRVIFSIGMSEYDSSFVFLPLEAAQTYFQVPTEGVNHLEVVVDHPDRVGEVA 240
Query: 242 ENIVRILG-NGVVVIDWQQRYQIFFSCYE 269
I G G+ + DW+Q FF+ +
Sbjct: 241 GTIASTNGLGGIRLRDWRQTNATFFNALQ 269
>gi|330967931|gb|EGH68191.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. actinidiae str. M302091]
Length = 317
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 71/267 (26%), Positives = 123/267 (46%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+ +FIS S S IG+ +GV+A+IVV+SVMNGF+ +M R+L
Sbjct: 1 MFRPLPIFIGMRYTRAKRRKSFISFISMTSMIGLALGVLAMIVVLSVMNGFQREMSSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H VI P+ D++ +A P+V +PF + +S S +
Sbjct: 61 GMVPHAVI-AGAKPVDDWKPLAAAALKNPEVTAAVPFTDMEGMLSYKGSMQPIQISGVDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G++++ GV++G AR ++IGDK+ ++ P P G+
Sbjct: 120 ALEHEVSIVTQHITRGSLADLKPGEFGVVLGDLTARRFRLTIGDKLTLIVPEVSSAPGGI 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + TV+G+F++ + + AQ+ + V G+ + +KD +
Sbjct: 180 TPRLQRLTVVGIFKVGAELDGSMGLINIADAAQMQRWQPDQVQGVRLALKDLYKAPQVST 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I LG G DW FS +
Sbjct: 240 AIAAGLGEGYHADDWTHTQGSLFSAMK 266
>gi|296116518|ref|ZP_06835128.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Gluconacetobacter hansenii ATCC 23769]
gi|295976730|gb|EFG83498.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Gluconacetobacter hansenii ATCC 23769]
Length = 415
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 85/268 (31%), Positives = 140/268 (52%), Gaps = 2/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F FE VA RYL + R F+S+ + S +G+ +GV LI+VMSVMNGF+ D++ R+L
Sbjct: 1 MFGPFERAVAGRYLHARRGERFVSVIAIFSLVGIALGVATLIIVMSVMNGFKADLLGRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+NG + + + DY +A R+ +P V P + Q ++ +G LVRG++
Sbjct: 61 GLNGDLSVYGISRTISDYDALAGRIRKVPGVESANPLIEAQVLLNSGGYN-AGGLVRGMT 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+D L+ ++F +++G LA G+S+G ++ ++SP G T G
Sbjct: 120 QADLQGLKEISGSLVAGSLDEFGSDDTIVVGTTLAERAGLSVGARLTLVSPNGAATAFGT 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R ++Y V+ +F DY+ V++ L AQ+YF + V+ I+V D + +
Sbjct: 180 MPRVRAYRVIAIFDAGVNDYNASYVFLPLHAAQVYFQMPRQVTQIQVMTHDAENVGPIRA 239
Query: 243 NIVRIL-GNGVVVIDWQQRYQIFFSCYE 269
NI + L G V V+DW Q FF +
Sbjct: 240 NIEQALGGTQVRVMDWTQSNNAFFGAVQ 267
>gi|268596791|ref|ZP_06130958.1| lipoprotein-releasing system transmembrane protein lolC [Neisseria
gonorrhoeae FA19]
gi|268603728|ref|ZP_06137895.1| lipoprotein-releasing system transmembrane protein lolC [Neisseria
gonorrhoeae PID1]
gi|268682199|ref|ZP_06149061.1| lipoprotein-releasing system transmembrane protein lolC [Neisseria
gonorrhoeae PID332]
gi|268550579|gb|EEZ45598.1| lipoprotein-releasing system transmembrane protein lolC [Neisseria
gonorrhoeae FA19]
gi|268587859|gb|EEZ52535.1| lipoprotein-releasing system transmembrane protein lolC [Neisseria
gonorrhoeae PID1]
gi|268622483|gb|EEZ54883.1| lipoprotein-releasing system transmembrane protein lolC [Neisseria
gonorrhoeae PID332]
Length = 415
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 68/268 (25%), Positives = 132/268 (49%), Gaps = 2/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS E + RYL + ++N F+S + +S G+ +GV ALIVV+SVMNGF++++ ++L
Sbjct: 1 MFS-LEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVLSVMNGFQKEIRGQLL 59
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I D++ + + ++ P+VS QA ++ + +
Sbjct: 60 NVAPHAEIGYIDNTDTDWRNLLRFAENRKGILAAAPYVSNQALLANAGEIRGVQIRGILP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++ G + +I+G LA LG +G K+ +++P G+VTP G+
Sbjct: 120 SEERKVVEYGDKMPAGKFEDLIPGEFDIILGVGLAEALGAEVGGKVTVITPEGNVTPAGI 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV+G+ + + DN + +Q+A++ + L+ V+G+ + + DP
Sbjct: 180 VPRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLDKEVAGLRLKLADPQNAPALTA 239
Query: 243 NIV-RILGNGVVVIDWQQRYQIFFSCYE 269
++ + V V DW + +F E
Sbjct: 240 TLIPEAQRDTVWVRDWTYSNRSYFEAVE 267
>gi|59801184|ref|YP_207896.1| LolC [Neisseria gonorrhoeae FA 1090]
gi|293399051|ref|ZP_06643216.1| lipoprotein-releasing system permease [Neisseria gonorrhoeae F62]
gi|59718079|gb|AAW89484.1| putative lipoprotein releasing system transmembrane protein
[Neisseria gonorrhoeae FA 1090]
gi|291610465|gb|EFF39575.1| lipoprotein-releasing system permease [Neisseria gonorrhoeae F62]
Length = 415
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 69/268 (25%), Positives = 133/268 (49%), Gaps = 2/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS E + RYL + ++N F+S + +S G+ +GV ALIVV+SVMNGF++++ ++L
Sbjct: 1 MFS-LEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVLSVMNGFQKEIRGQLL 59
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I D++ + + ++ P+VS QA ++ + +
Sbjct: 60 NVAPHAEIGYIDNTDTDWRNLLRFAENRKGILAAAPYVSNQALLANAGEIRGVQIRGILP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++ G + +I+G LA LG +GDK+ +++P G+VTP G+
Sbjct: 120 SEERKVVEYGDKMPAGKFEDLIPGEFDIILGIGLAEALGAEVGDKVTVITPEGNVTPAGI 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV+G+ + + DN + +Q+A++ + L+ V+G+ + + DP
Sbjct: 180 VPRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLDKEVAGLRLKLADPQNAPALTA 239
Query: 243 NIV-RILGNGVVVIDWQQRYQIFFSCYE 269
++ + V V DW + +F E
Sbjct: 240 TLIPEAQRDTVWVRDWTYSNRSYFEAVE 267
>gi|121634928|ref|YP_975173.1| putative integral membrane protein [Neisseria meningitidis FAM18]
gi|120866634|emb|CAM10385.1| putative integral membrane protein [Neisseria meningitidis FAM18]
Length = 415
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 68/268 (25%), Positives = 133/268 (49%), Gaps = 2/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS E + RYL + ++N F+S + +S G+ +GV ALIVV+SVMNGF++++ ++L
Sbjct: 1 MFS-LEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVLSVMNGFQKEIRGQLL 59
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I D++ + + ++ P+VS QA ++ + +
Sbjct: 60 NVAPHAEIGYIDNTDTDWRNLLRFTENRKGILAAAPYVSNQALLANAGEIRGVQMRGILP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++ G + +I+G LA LG +G+K+ +++P G+VTP G+
Sbjct: 120 SEERKVVEYGDKMPAGKFEDLIPGEFDIILGVGLAEALGAEVGNKVTVITPEGNVTPAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV+G+ + + DN + +Q+A++ + L+ V+G+ + + DP
Sbjct: 180 VPRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLDKEVAGLRLKLADPQNAPALTA 239
Query: 243 NIV-RILGNGVVVIDWQQRYQIFFSCYE 269
++ + V V DW + +F E
Sbjct: 240 TLIPEAQRDTVWVRDWTFSNRSYFEAVE 267
>gi|313499725|gb|ADR61091.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas putida BIRD-1]
Length = 413
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 67/267 (25%), Positives = 114/267 (42%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+N FIS S S IG+ +GV+A+IVV+SVMNGF+ +M R+L
Sbjct: 1 MFRPLPIFIGARYTRAKRRNHFISFISMTSMIGLSLGVLAMIVVLSVMNGFQREMSSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H PL D+ +A+ P V+ P + +S + +
Sbjct: 61 GLVPHA-AILGVQPLDDWHKVADAAMKNPAVMAAAPITEMEGMLSYKGAMQPIQVGGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G + GV+IG+ AR ++ GDK+ ++ P P G+
Sbjct: 120 AEEGKVSIVGQHIVQGRLQGLQPGEFGVVIGELTARRFRLNTGDKLTLIVPEISKEPGGI 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + TV+G+F++ + A++ V G+ + + D A + +
Sbjct: 180 TPRMQRLTVVGIFKVGAELDGSQAYIHVADAAEMQRWAPGQVQGVRLKLHDLYAAPQVSK 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I LG+ DW FS +
Sbjct: 240 AIAAGLGDAYRADDWSHTQGSLFSAMK 266
>gi|194365319|ref|YP_002027929.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Stenotrophomonas maltophilia R551-3]
gi|194348123|gb|ACF51246.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Stenotrophomonas maltophilia R551-3]
Length = 413
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 63/263 (23%), Positives = 125/263 (47%), Gaps = 2/263 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RYL + R+N FIS S S +G+ +GV LI ++VM+GF++++ R+L
Sbjct: 1 MFKPLPVAIGLRYLRAKRRNGFISFISMASILGIALGVTVLITTLAVMSGFQKEIRSRLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I + P+ D+ + + P V P++ Q+ +SG G+ + +
Sbjct: 61 QMTAHTTISRDGEPMPDWMRVVDVARKDPRVAGAAPYIEIQSMISGPRVQGAIIQGIDPA 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G+ + +++GK+LA LG+ +GD++ + TP G
Sbjct: 121 LEPKVSV-IDKKVTKGSYDSLKPGSFNLLLGKELAIWLGVDVGDQVLVTFAEVQGTPAGA 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV G+F + + D G+ + ++++ + + +G+ + + D D +
Sbjct: 180 VPRMKRFTVSGLFEAGYNEVDRGVGFANMKDLERVLR-SDGATGVRLKLHDMDRSLEVGV 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFF 265
++ + LG V DW Q+ +
Sbjct: 239 DLAQNLGGAYRVSDWTQQNANLY 261
>gi|26988880|ref|NP_744305.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Pseudomonas putida KT2440]
gi|24983688|gb|AAN67769.1|AE016408_7 lipoprotein releasing system, permease protein [Pseudomonas putida
KT2440]
Length = 413
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 67/267 (25%), Positives = 115/267 (43%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+N FIS S S IG+ +GV+A+IVV+SVMNGF+ +M R+L
Sbjct: 1 MFRPLPIFIGARYTRAKRRNHFISFISMTSMIGLSLGVLAMIVVLSVMNGFQREMSSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H P+ D+ +A+ P V+ V P + +S + +
Sbjct: 61 GLVPHA-AILGVQPVDDWHKVADAAMKNPAVMAVAPITEMEGMLSYKGAMQPIQVGGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G + GV+IG+ AR ++ GDK+ ++ P P G+
Sbjct: 120 AEEGKVSIVGQHIVQGRLQGLQPGEFGVVIGELTARRFRLNTGDKLTLIVPEISKEPGGI 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + TV+G+F++ + A++ V G+ + + D A + +
Sbjct: 180 TPRMQRLTVVGIFKVGAELDGSQAYIHVADAAEMQRWAPGQVQGVRLKLHDLYAAPQVSK 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I LG+ DW FS +
Sbjct: 240 AIAAGLGDAYRADDWSHTQGSLFSAMK 266
>gi|254493772|ref|ZP_05106943.1| lipoprotein-releasing system transmembrane protein lolC [Neisseria
gonorrhoeae 1291]
gi|268601399|ref|ZP_06135566.1| lipoprotein-releasing system transmembrane protein lolC [Neisseria
gonorrhoeae PID18]
gi|226512812|gb|EEH62157.1| lipoprotein-releasing system transmembrane protein lolC [Neisseria
gonorrhoeae 1291]
gi|268585530|gb|EEZ50206.1| lipoprotein-releasing system transmembrane protein lolC [Neisseria
gonorrhoeae PID18]
Length = 415
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 68/268 (25%), Positives = 132/268 (49%), Gaps = 2/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS E + RYL + ++N F+S + +S G+ +GV ALIVV+SVMNGF++++ ++L
Sbjct: 1 MFS-LEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVLSVMNGFQKEIRGQLL 59
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I D++ + + ++ P+VS QA ++ + +
Sbjct: 60 NVAPHAEIGYIDNTDTDWRNLLRFAENRKGILAAAPYVSNQALLANAGEIRGVQIRGILP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++ G + +I+G LA LG +G K+ +++P G+VTP G+
Sbjct: 120 SEERKVVEYGDKMPAGKFEDLIPGEFDIILGIGLAEALGAEVGGKVTVITPEGNVTPAGI 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV+G+ + + DN + +Q+A++ + L+ V+G+ + + DP
Sbjct: 180 VPRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLDKEVAGLRLKLADPQNAPALTA 239
Query: 243 NIV-RILGNGVVVIDWQQRYQIFFSCYE 269
++ + V V DW + +F E
Sbjct: 240 TLIPEAQRDTVWVRDWTYSNRSYFEAVE 267
>gi|261378751|ref|ZP_05983324.1| lipoprotein releasing system transmembrane protein LolC [Neisseria
cinerea ATCC 14685]
gi|269144906|gb|EEZ71324.1| lipoprotein releasing system transmembrane protein LolC [Neisseria
cinerea ATCC 14685]
Length = 415
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 67/268 (25%), Positives = 133/268 (49%), Gaps = 2/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS E + RYL + ++N F+S + +S G+ +GV ALIVV+SVMNGF++++ ++L
Sbjct: 1 MFS-LEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVLSVMNGFQKEIRGQLL 59
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I D++ + + ++ P+VS QA ++ + +
Sbjct: 60 NVAPHAEIGYIDNTDTDWRNLRKFTENQKGILATAPYVSDQALLANAGEVRGVQIRGILP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++ G + +I+G LA LG+ +G+K+ +++P G+VTP G+
Sbjct: 120 SEERKVVEYGDKMPSGKFEDLIPGQFDIILGVGLAEALGVEVGNKVTVITPEGNVTPAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K + V+G+ + + DN + +Q+A++ + L+ V+G+ + + DP
Sbjct: 180 VPRLKQFNVVGLVKTGVYEVDNSLAMTHIQDARVLYRLDKEVAGLRLKLADPQNAPALTA 239
Query: 243 NIV-RILGNGVVVIDWQQRYQIFFSCYE 269
++ + V V DW + +F E
Sbjct: 240 KLIPEAQRDTVWVRDWTFSNRSYFEAVE 267
>gi|294084091|ref|YP_003550849.1| ABC transporter permease [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663664|gb|ADE38765.1| ABC-type transport system, permease component [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 418
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 77/269 (28%), Positives = 126/269 (46%), Gaps = 1/269 (0%)
Query: 1 MSIF-SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
M++F S E ++A RY+ + R FIS+ ++ S G+ +GV LI+VMSVMNGFR +++
Sbjct: 1 MALFFSPVERMLALRYMRARRAEGFISVIAWFSLAGITLGVATLIIVMSVMNGFRAELVD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+LG+NGHV I + + + ++ ++ G ++R
Sbjct: 61 RILGLNGHVAIYSTEGNGIKNYDDLALSITDMPGVIAVTPQIEGQVMATKNAVSLGAVIR 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
G+ SD + + + F GV+IGK +A GI G I + + G T
Sbjct: 121 GVRWSDLAARKPLWDSLDDKAIASFRDDGGVLIGKTMAFKTGIVPGGTITLTTARGKATA 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
G +S+ V G+F + +YD ++M L A + L +VSG+E++V DP I
Sbjct: 181 FGTLPTRRSFKVAGIFDVGMHEYDTSFIFMPLDVAGEFLGLPTSVSGLEIYVDDPQNIAF 240
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCY 268
I L + DW R + F +
Sbjct: 241 YRATIASTLTKNLRAFDWLDRNKSFLNAL 269
>gi|254805014|ref|YP_003083235.1| putative lipoprotein releasing system trasmembrane protein
[Neisseria meningitidis alpha14]
gi|254668556|emb|CBA06021.1| putative lipoprotein releasing system trasmembrane protein
[Neisseria meningitidis alpha14]
Length = 415
Score = 146 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 68/268 (25%), Positives = 133/268 (49%), Gaps = 2/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS E + RYL + ++N F+S + +S G+ +GV ALIVV+SVMNGF++++ ++L
Sbjct: 1 MFS-LEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVLSVMNGFQKEIRGQLL 59
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I D++ + + ++ P+VS QA ++ + +
Sbjct: 60 NVAPHAEIGYIDNTDTDWRNLLRFTENRKGILAAAPYVSNQALLANAGEIRGVQMRGILP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++ G + +I+G LA LG +G+K+ +++P G+VTP G+
Sbjct: 120 SEERKVVEYGDKMPAGKFEDLIPGEFDIILGVGLAEALGAEVGNKVTVITPEGNVTPAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV+G+ + + DN + +Q+A++ + L+ V+G+ + + DP
Sbjct: 180 VPRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLDKEVAGLRLKLADPQNAPALTA 239
Query: 243 NIV-RILGNGVVVIDWQQRYQIFFSCYE 269
++ + V V DW + +F E
Sbjct: 240 TLIPEAQRDAVWVRDWTFSNRSYFEAVE 267
>gi|255067892|ref|ZP_05319747.1| lipoprotein releasing system, permease protein [Neisseria sicca
ATCC 29256]
gi|255047880|gb|EET43344.1| lipoprotein releasing system, permease protein [Neisseria sicca
ATCC 29256]
Length = 375
Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats.
Identities = 68/268 (25%), Positives = 138/268 (51%), Gaps = 2/268 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ E + RYL + ++N F+S + IS +G+ +GVMALIVV+SVM GF+ D+ ++L
Sbjct: 1 MASLETWIGLRYLRAKKRNGFMSFITVISIVGIALGVMALIVVLSVMAGFQRDIRGQLLK 60
Query: 64 INGHVVIQQKYY-PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + ++ + + +V++ P+VSGQA ++ + +
Sbjct: 61 VAPHAEMGYYDNGNGKSWESLREIIKGRKEVLQSAPYVSGQALLANAGEVQGVQIRGILP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++ S G+ + +I+G+DLA L + +G+KI +++P G+VTP G+
Sbjct: 121 DEEKKIVEYSKEMPVGSFDDLKPGEFDIILGQDLAETLDVKVGEKITVVTPEGNVTPAGV 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K + V+G+ + + + +N + +++AQ+ + L+ +G+ + + DP E
Sbjct: 181 VPRLKQFKVVGLVKTKIHELNNSLALTHMKDAQVLYRLDENAAGLRLKLADPINAPSFTE 240
Query: 243 NIV-RILGNGVVVIDWQQRYQIFFSCYE 269
++ + L V + DW + +F E
Sbjct: 241 TLLPKNLQEEVWLRDWTYTNRSYFEAVE 268
>gi|146306638|ref|YP_001187103.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas mendocina ymp]
gi|145574839|gb|ABP84371.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Pseudomonas mendocina ymp]
Length = 415
Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats.
Identities = 66/267 (24%), Positives = 118/267 (44%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RY + R+N F+S S S +G+ +GVM +I+V+SVMNGF +M RVL
Sbjct: 1 MFRPLFVFIGTRYTRAKRRNHFVSFISLTSMLGLTLGVMVMILVLSVMNGFDHEMRTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H + + P+ D+ +A +++ P V + PF Q ++ ++
Sbjct: 61 GMIPHATV-ESATPVSDWPALARQVERHPRVEALAPFTQMQGLLTHDGKVQKVLINAIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G + + +IIG A LG+ +GDK+ ++P VTP GM
Sbjct: 120 EQERKVSIIDGFFQQGGLDSLQPGDFAMIIGDKAAAKLGVKLGDKVTFVAPEVTVTPAGM 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLY-FNLENAVSGIEVFVKDPDAIEKTH 241
R K +TV G+F + + D + ++ + + V G+ + D ++
Sbjct: 180 FPRLKRFTVTGIFHVGAGEIDGALALANISDLARLQRWQPDQVQGLRLKFDDLFQAPRSA 239
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
I + L DW + + +
Sbjct: 240 WEIAQTLDGDFYARDWTRTHGNLYQAI 266
>gi|167032705|ref|YP_001667936.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas putida GB-1]
gi|166859193|gb|ABY97600.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Pseudomonas putida GB-1]
Length = 413
Score = 146 bits (366), Expect = 4e-33, Method: Composition-based stats.
Identities = 67/267 (25%), Positives = 115/267 (43%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+N FIS S S IG+ +GV+A+IVV+SVMNGF+ +M R+L
Sbjct: 1 MFRPLPIFIGARYTRAKRRNHFISFISMTSMIGLSLGVLAMIVVLSVMNGFQREMSSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H PL D+ +A+ P V+ V P + +S + +
Sbjct: 61 GLVPHA-AILGVQPLDDWHKVADAAMQNPAVMAVAPITEMEGMLSYKGAMQPIQVGGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G + + GV+IG+ AR ++ GDK+ ++ P P G+
Sbjct: 120 AEEGKVSIVGQHIVQGRLQDLQPGEFGVVIGELTARRFRLNTGDKLTLIVPEISKEPGGI 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + V+G+F++ + A++ V G+ + + D A + +
Sbjct: 180 TPRMQRLNVVGIFKVGAELDGSQAYIHVADAAEMQRWAPGQVQGVRLKLHDLYAAPQVSK 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I LG+ DW FS +
Sbjct: 240 AIAAGLGDAYRADDWSHTQGSLFSAMK 266
>gi|313668350|ref|YP_004048634.1| lipoprotein releasing system transmembrane protein [Neisseria
lactamica ST-640]
gi|313005812|emb|CBN87266.1| Putative lipoprotein releasing system transmembrane protein
[Neisseria lactamica 020-06]
Length = 415
Score = 146 bits (366), Expect = 4e-33, Method: Composition-based stats.
Identities = 67/268 (25%), Positives = 133/268 (49%), Gaps = 2/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS E + RYL + ++N F+S + +S G+ +GV ALIVV+SVMNGF++++ ++L
Sbjct: 1 MFS-LEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVLSVMNGFQKEIRGQLL 59
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I D++ + + ++ P+VS QA ++ + +
Sbjct: 60 NVAPHAEIGYIDNTGTDWRNLLRFTENRKGILAAAPYVSNQALLANAGEIRGVQMRGILP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++ G + +I+G LA LG+ +G+K+ +++P G+VTP G+
Sbjct: 120 SEERKVVEYGDKMPAGKFEDLIPGEFDIILGVGLAEALGVEVGNKVTVITPEGNVTPAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K + V+G+ + + DN + +Q+A++ + L+ V+G+ + + DP
Sbjct: 180 VPRLKQFNVVGLVKTGVYEVDNSLAMTHIQDARVLYRLDKEVAGLRLKLADPQNAPALTA 239
Query: 243 NIV-RILGNGVVVIDWQQRYQIFFSCYE 269
++ + V V DW + +F E
Sbjct: 240 TLIPEAQRDTVWVRDWTFSNRSYFEAVE 267
>gi|21231570|ref|NP_637487.1| lipoprotein releasing system transmembrane protein [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66768309|ref|YP_243071.1| lipoprotein releasing system transmembrane protein [Xanthomonas
campestris pv. campestris str. 8004]
gi|188991448|ref|YP_001903458.1| ABC transporter-type lipoprotein-releasing protein [Xanthomonas
campestris pv. campestris str. B100]
gi|21113256|gb|AAM41411.1| lipoprotein releasing system transmembrane protein [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66573641|gb|AAY49051.1| lipoprotein releasing system transmembrane protein [Xanthomonas
campestris pv. campestris str. 8004]
gi|167733208|emb|CAP51406.1| ABC transporter-type lipoprotein-releasing protein [Xanthomonas
campestris pv. campestris]
Length = 416
Score = 146 bits (366), Expect = 4e-33, Method: Composition-based stats.
Identities = 64/268 (23%), Positives = 123/268 (45%), Gaps = 2/268 (0%)
Query: 2 SIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+F V + RYL + R+N FIS S S +G+ +GV LI ++VM+GF++++ R+
Sbjct: 3 RMFKPIPVAIGLRYLRAKRRNGFISFISMASILGIALGVTVLITTLAVMSGFQKEIRDRL 62
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
L + H + + P+ D++ P + P++ ++ + G + V
Sbjct: 63 LQMAAHATVSAEGAPMQDWRHAVEVASADPRIAGAAPYIETESLLQGPRKQPAIVRGVIP 122
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
S + + G+V + ++IGK+LA LG+ +GD I +L TP+G
Sbjct: 123 SEEAKVSVLAKKMQQ-GSVDSLTPGSYNIVIGKELALWLGVDVGDSIVVLLSDTQATPLG 181
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
R K +TV G+F + + D G+ +++++ + + V+G+ + + D D
Sbjct: 182 AMPRLKRFTVSGIFEAGYNEIDRGLAVVNMEDLARVLRM-DGVTGVRLRLHDMDQAFTVA 240
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ L V DW Q + +
Sbjct: 241 RDLALKLRGPYRVSDWTQENANLYHSLK 268
>gi|283853282|ref|ZP_06370532.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Desulfovibrio sp. FW1012B]
gi|283571322|gb|EFC19332.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Desulfovibrio sp. FW1012B]
Length = 409
Score = 146 bits (366), Expect = 4e-33, Method: Composition-based stats.
Identities = 83/268 (30%), Positives = 137/268 (51%), Gaps = 4/268 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
FE+ +A RYL + +K AFIS+ S IS +GV +GV +LIVV+ VMNGF ++ ++LGI
Sbjct: 1 MSFELYIAKRYLLARQKQAFISVISLISILGVGLGVASLIVVVGVMNGFSLELRDKILGI 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N H+V L DY+ + + +P V+ PFV + +S VL S
Sbjct: 61 NAHMVASVAGGALHDYREDMKKAEAVPGVLGATPFVYTEVMLSSPRGVKGVVLRGVDPAS 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDR--GKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
L G + + G+I+G++LA LG+++GD +N++SP G + G
Sbjct: 121 AGKVLALPAEMTAGKLEDLTAPGLFPGIIVGRELADRLGLALGDTLNLMSPAGKESAAGF 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ K++T+ G+F+ +YD+ + Y+S+ AQ + + V+G+E+ V D DA++
Sbjct: 181 SPKVKTFTICGLFKTGMYEYDSTLAYVSIPAAQELLGFKRDIVTGLELKVADVDAVDTLA 240
Query: 242 ENIVRIL-GNGVVVIDWQQRYQIFFSCY 268
+ + G V V W F
Sbjct: 241 PLVRTAMGGPPVYVRTWIDMNGNLFKAL 268
>gi|70729345|ref|YP_259082.1| lipoprotein releasing system transmembrane protein LolE
[Pseudomonas fluorescens Pf-5]
gi|68343644|gb|AAY91250.1| lipoprotein releasing system transmembrane protein LolE
[Pseudomonas fluorescens Pf-5]
Length = 414
Score = 146 bits (366), Expect = 4e-33, Method: Composition-based stats.
Identities = 70/267 (26%), Positives = 122/267 (45%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+N F+S S S IG+ +GV+A+IVV+SVMNGF+ +M R+L
Sbjct: 1 MFRPLSIFIGTRYTRAKRRNRFVSFISMTSMIGLALGVLAMIVVLSVMNGFQREMSSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I P+ D+Q +A P+V +PF + +S + +
Sbjct: 61 GMVPHATIVGVK-PIDDWQPVAAAALKNPEVTAAVPFTEMEGMLSYKGAMQPIQISGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G++ + GV+IG+ AR +++GDK+ ++ P P G+
Sbjct: 120 AQEGKVSIVAQHIVQGSLQDLKPGEFGVVIGEITARRFRLNVGDKLTLIVPEVSTAPGGI 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + V+G+F++ + + A++ N V + + VKD A K
Sbjct: 180 TPRMQRLNVVGVFKVGAELDGSMGLIHVADAAEMQHWQPNQVQSVRLAVKDLYAAPKVSA 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+I + LG DW FS +
Sbjct: 240 DIAKGLGADFRADDWTHTQGSLFSAMK 266
>gi|190573782|ref|YP_001971627.1| putative lipoprotein releasing system transmembrane protein
[Stenotrophomonas maltophilia K279a]
gi|190011704|emb|CAQ45323.1| putative lipoprotein releasing system transmembrane protein
[Stenotrophomonas maltophilia K279a]
Length = 413
Score = 146 bits (366), Expect = 4e-33, Method: Composition-based stats.
Identities = 65/263 (24%), Positives = 125/263 (47%), Gaps = 2/263 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RYL + R+N FIS S S +G+ +GV LI ++VM+GF++++ R+L
Sbjct: 1 MFKPIPVAIGLRYLRAKRRNGFISFISMASILGIALGVTVLITTLAVMSGFQKEIRSRLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I + P+ D+ + + P V P++ Q+ +SG G+ + +
Sbjct: 61 QMTAHTTISRDGEPMPDWMRVVDVARKDPRVAGAAPYIEIQSMISGPRVQGAIIQGIDPA 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G+ + V++GK+LA LG+ +GD++ + TP G
Sbjct: 121 LEPKVSV-IDKKVTKGSYDSLKPGSFNVLLGKELAVWLGVDVGDQVLVTFAEVQGTPAGA 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV G+F + + D G+ + ++Q+ + + +G+ + + D D +
Sbjct: 180 VPRMKRFTVSGIFEAGYNEVDRGVGFANMQDLERVLR-SDGATGVRLKLHDMDRSLEVGV 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFF 265
++ + LG V DW Q+ +
Sbjct: 239 DLAQSLGGAYRVSDWTQQNANLY 261
>gi|289624088|ref|ZP_06457042.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. aesculi str. NCPPB3681]
gi|289648580|ref|ZP_06479923.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. aesculi str. 2250]
gi|330869877|gb|EGH04586.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 414
Score = 146 bits (366), Expect = 4e-33, Method: Composition-based stats.
Identities = 73/267 (27%), Positives = 123/267 (46%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+ +FIS S S IG+ +GV+A+IVV+SVMNGF+ +M R+L
Sbjct: 1 MFRPLPIFIGMRYTRAKRRKSFISFISMTSMIGLALGVLAMIVVLSVMNGFQREMSSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H VI P+ D++ +A+ P+V +PF + +S S +
Sbjct: 61 GMVPHAVI-AGATPVDDWKPLADAALKNPEVTAAVPFTDMEGMLSYKGSMQPIQISGVDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G++ + GV++G AR +SIGDK+ ++ P P G+
Sbjct: 120 ALEHEVSIVTQHITRGSLEDLKPGEFGVVLGDITARRFRLSIGDKLTLIVPEVSSAPGGI 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + TV+G+F++ + + AQ+ N V G+ + +KD +
Sbjct: 180 TPRLQRLTVVGIFKVGAELDGSMGLINIADAAQMQRWQPNQVQGVRLALKDLYKAPQVST 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I LG G DW FS +
Sbjct: 240 AIAAGLGAGYHADDWTHTQGSLFSAMK 266
>gi|320324797|gb|EFW80869.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. glycinea str. B076]
gi|320329163|gb|EFW85160.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. glycinea str. race 4]
gi|330881536|gb|EGH15685.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. glycinea str. race 4]
Length = 414
Score = 146 bits (366), Expect = 5e-33, Method: Composition-based stats.
Identities = 72/267 (26%), Positives = 122/267 (45%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+ +FIS S S IG+ +GV+A+IVV+SVMNGF+ +M R+L
Sbjct: 1 MFRPLPIFIGMRYTRAKRRKSFISFISMTSMIGLALGVLAMIVVLSVMNGFQREMSSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H VI P+ D++ +A+ P+V +PF + +S S +
Sbjct: 61 GMVPHAVI-AGATPVDDWKPLADAALKNPEVTAAVPFTDMEGMLSYKGSMQPIQISGVDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G++ + GV++G AR +SIGDK+ ++ P P G+
Sbjct: 120 ALEHEVSIVTQHITRGSLEDLKPGEFGVVLGDITARRFRLSIGDKLTLIVPEVSSAPGGI 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + V+G+F++ + + AQ+ N V G+ + +KD +
Sbjct: 180 TPRLQRLAVVGIFKVGAELDGSMGLINIADAAQMQRWQPNQVQGVRLALKDLYKAPQVST 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I LG G DW FS +
Sbjct: 240 AIAAGLGAGYHADDWTHTQGSLFSAMK 266
>gi|158522856|ref|YP_001530726.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Desulfococcus oleovorans Hxd3]
gi|158511682|gb|ABW68649.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Desulfococcus oleovorans Hxd3]
Length = 408
Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats.
Identities = 81/266 (30%), Positives = 139/266 (52%), Gaps = 3/266 (1%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+E+ + R+L + ++N F+S+ + +S +GV+IGVMALI+V++VM+GF D+ R+LGI
Sbjct: 3 YELFIGRRHLMTAKRNVFVSLITLLSVVGVIIGVMALIIVIAVMSGFEADIKARILGIES 62
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS-- 124
HVV+ + L DY+ + + P+V LPF+ Q G+L +
Sbjct: 63 HVVLSRHGGELHDYERVVQEVSRHPEVETQLPFIMTQVMFRSSYGVSGGLLKGVEPDKAA 122
Query: 125 -DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ +N D+ G+++GK+LA+ LG++ GD + ++ G ++P+G
Sbjct: 123 HVMTIFKNMEPLAEKLRQRTKDQAPGIVLGKELAQRLGVTEGDTVYLVLSMGALSPVGHM 182
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
K + V G+F +YD+ Y+ L EAQ +++N+V GIE+ VKD + E
Sbjct: 183 PAVKRFAVTGIFEAGMHEYDSAFSYIHLAEAQHILHMDNSVGGIEIRVKDIYRADTVGEQ 242
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+V LG DW + FS +
Sbjct: 243 LVARLGYPYYARDWMSMNRNLFSALK 268
>gi|303248491|ref|ZP_07334749.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Desulfovibrio fructosovorans JJ]
gi|302490111|gb|EFL50031.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Desulfovibrio fructosovorans JJ]
Length = 409
Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats.
Identities = 82/268 (30%), Positives = 136/268 (50%), Gaps = 4/268 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
FE +A RYL + +K AFIS+ S IS +GV +GV +LIVV+ VMNGF ++ ++LGI
Sbjct: 1 MSFEYFIAKRYLLARQKQAFISVISLISILGVGLGVASLIVVVGVMNGFSSELRDKILGI 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N H+V L Y+ +++ +P V+ PFV + +S VL S
Sbjct: 61 NAHMVAAVAGGALHHYREDMKKVEAVPGVLGATPFVYTEVMLSSPRGVKGVVLRGVDPVS 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDR--GKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
L G +++ G+I+G++LA LG+S+GD IN++SP G + G
Sbjct: 121 AGKVLALPQEMVAGKLADLDTPGLFPGIIVGRELADRLGLSLGDTINLMSPAGKESAAGF 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ K++T+ G+F+ +YD+ + Y+++ AQ + + +G+E+ V D DA+ +
Sbjct: 181 SPKVKTFTIRGLFKTGMYEYDSTLAYVTIPAAQELLGFKRDIATGLELKVADVDAVTRLV 240
Query: 242 ENIVRIL-GNGVVVIDWQQRYQIFFSCY 268
+ + G V V W F
Sbjct: 241 GKVRDAMGGPPVYVRTWIDMNGNLFKAL 268
>gi|257484403|ref|ZP_05638444.1| lipoprotein releasing system transmembrane protein LolE
[Pseudomonas syringae pv. tabaci ATCC 11528]
gi|330889112|gb|EGH21773.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. mori str. 301020]
gi|330986256|gb|EGH84359.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. lachrymans str. M301315]
gi|331013185|gb|EGH93241.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 414
Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats.
Identities = 73/267 (27%), Positives = 123/267 (46%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+ +FIS S S IG+ +GV+A+IVV+SVMNGF+ +M R+L
Sbjct: 1 MFRPLPIFIGMRYTRAKRRKSFISFISMTSMIGLALGVLAMIVVLSVMNGFQREMSSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H VI P+ D++ +A+ P+V +PF + +S S +
Sbjct: 61 GMVPHAVI-AGATPVDDWKPLADAALKNPEVTAAVPFTDMEGMLSYKGSMQPIQISGVDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G++ + GV++G AR +SIGDK+ ++ P P G+
Sbjct: 120 ALEHEVSIVTQHITRGSLEDLKPGEFGVVLGDITARRFRLSIGDKLTLIVPEVSSAPGGI 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + TV+G+F++ + + AQ+ N V G+ + +KD +
Sbjct: 180 TPRLQRLTVVGIFKVGAELDGSMGLINIADAAQMQRWQPNQVQGVRLALKDLYKAPQVST 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I LG G DW FS +
Sbjct: 240 AIAAGLGAGYHADDWTHTQGSLFSAMK 266
>gi|71735481|ref|YP_274092.1| lipoprotein releasing system transmembrane protein LolE
[Pseudomonas syringae pv. phaseolicola 1448A]
gi|71556034|gb|AAZ35245.1| lipoprotein releasing system transmembrane protein LolE
[Pseudomonas syringae pv. phaseolicola 1448A]
Length = 414
Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats.
Identities = 71/267 (26%), Positives = 121/267 (45%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+ +FIS S S IG+ +GV+A+IVV+SVMNGF+ +M R+L
Sbjct: 1 MFRPLPIFIGMRYTRAKRRKSFISFISMTSMIGLALGVLAMIVVLSVMNGFQREMSSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H VI P+ D++ +A+ P+V +PF + +S S +
Sbjct: 61 GMVPHAVI-AGATPVDDWKPLADAALKNPEVTAAVPFTDMEGMLSYKGSMQPIQISGVDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G++ + GV++G AR +SIGDK+ ++ P P G+
Sbjct: 120 ALEHEVSIVTQHITRGSLEDLKPGEFGVVLGDITARRFRLSIGDKLTLIVPEVSSAPGGI 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + V+ +F++ + + AQ+ N V G+ + +KD +
Sbjct: 180 TPRLQRLAVVSIFKVGAELDGSMGLINIADAAQMQRWQPNQVQGVRLALKDLYKAPQVST 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I LG G DW FS +
Sbjct: 240 AIAAGLGAGYHADDWTHTQGSLFSAMK 266
>gi|309378622|emb|CBX22800.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 415
Score = 145 bits (365), Expect = 6e-33, Method: Composition-based stats.
Identities = 68/268 (25%), Positives = 133/268 (49%), Gaps = 2/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS E + RYL + ++N F+S + +S G+ +GV ALIVV+SVMNGF++++ +L
Sbjct: 1 MFS-LEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVLSVMNGFQKEIRGELL 59
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I D++ + + ++ P+VS QA ++ + +
Sbjct: 60 NVAPHAEIGYIDNTGTDWRNLLRFTENRKGILAAAPYVSNQALLANAGEIRGVQMRGILP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++ G + +I+G LA LG+ +G+K+ +++P G+VTP G+
Sbjct: 120 SEERKVVEYGDKMPAGKFEDLIPGEFDIILGVGLAEALGVEVGNKVTVITPEGNVTPAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV+G+ + + DN + +Q+A++ + L+ V+G+ + + DP
Sbjct: 180 VPRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLDKEVAGLRLKLADPQNAPALTA 239
Query: 243 NIV-RILGNGVVVIDWQQRYQIFFSCYE 269
++ + V V DW + +F E
Sbjct: 240 TLIPEAQRDTVWVRDWTFSNRSYFEAVE 267
>gi|239908487|ref|YP_002955229.1| lipoprotein releasing system transmembrane protein LolC
[Desulfovibrio magneticus RS-1]
gi|239798354|dbj|BAH77343.1| lipoprotein releasing system transmembrane protein LolC
[Desulfovibrio magneticus RS-1]
Length = 409
Score = 145 bits (365), Expect = 6e-33, Method: Composition-based stats.
Identities = 77/268 (28%), Positives = 136/268 (50%), Gaps = 4/268 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
FE+ VA RYL + +K AFIS+ S IS +GV +GV +LIVV+ VM+GF ++ ++LGI
Sbjct: 1 MSFELFVARRYLTARQKQAFISVISLISVLGVGLGVASLIVVVGVMHGFSTELRDKILGI 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N H+V + DY+ + + + +P V+ PFV + +S VL S
Sbjct: 61 NAHMVAAVAGGAMHDYRELMGKAEAVPGVLGATPFVYTEVMLSSARGVKGVVLRGVDPAS 120
Query: 125 DFSYLQNSFSRFYGNVSNDFD--RGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
L G++ + G+++G++LA LG+ +G+ +N++SP G + G
Sbjct: 121 AGKVLALPKEMIVGSLDDLEIPGPFPGIVLGRELADRLGLIVGETVNLMSPAGKESAAGF 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ K++ + G+F+ +YD+ + Y+++ AQ + + +G+E+ V D DA++
Sbjct: 181 SPKVKTFVLRGLFKSGMYEYDSTLAYVTIPAAQELLGFKRDIATGLELKVADVDAVDALA 240
Query: 242 ENIVRIL-GNGVVVIDWQQRYQIFFSCY 268
+ L G + V W F
Sbjct: 241 PKVRAALGGPPLFVRTWIDMNGNLFKAL 268
>gi|149927854|ref|ZP_01916105.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Limnobacter sp. MED105]
gi|149823476|gb|EDM82707.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Limnobacter sp. MED105]
Length = 425
Score = 145 bits (364), Expect = 7e-33, Method: Composition-based stats.
Identities = 72/268 (26%), Positives = 133/268 (49%), Gaps = 4/268 (1%)
Query: 6 RFEVIVAWRYLFS---NRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
F+V +A RY+ ++ FIS S +S G+ +GV ALIVV+SVMNGF++++ R+L
Sbjct: 12 PFDVEIALRYVRGGGHRSRDKFISFISGLSMAGIGLGVAALIVVLSVMNGFQKEVRDRML 71
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H+ + + + + + + + +VRGI
Sbjct: 72 SVIAHIEVLAPQEGFDNPEALVGAIKAANPKVIGAAPYVAGESMLAHGDLLRPAIVRGID 131
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + G++SN V++G +LA+ +G+S+GD+I +++P G +TP GM
Sbjct: 132 PAQEREVSDFKEVISGSLSNLQAGEFRVVLGIELAKQIGVSVGDRITLIAPSGQMTPAGM 191
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K++ + + +YD+G+V M+L +A ++ +GI V + D DA
Sbjct: 192 IPRLKAFEITALVSTGHYEYDSGLVLMNLDDAARFYRSLGP-TGIRVKLNDMDAAPLVAR 250
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYES 270
+I R L V V DW + + +F+ ++
Sbjct: 251 DIERQLPPTVWVRDWSVQNRTWFAAVQT 278
>gi|70729343|ref|YP_259080.1| lipoprotein releasing system transmembrane protein LolC
[Pseudomonas fluorescens Pf-5]
gi|68343642|gb|AAY91248.1| lipoprotein releasing system transmembrane protein LolC
[Pseudomonas fluorescens Pf-5]
Length = 416
Score = 145 bits (364), Expect = 8e-33, Method: Composition-based stats.
Identities = 74/268 (27%), Positives = 123/268 (45%), Gaps = 3/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RY + R+N F+S S S IG+ +GV+ +IVV+SVMNGF +M RVL
Sbjct: 1 MFRPLFAFIGTRYTRAKRRNHFVSFISLTSMIGLALGVIVMIVVLSVMNGFDHEMRTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I+ P+ D+Q +A+++ P V+ V PF Q ++ +L
Sbjct: 61 GMVPHATIESGE-PISDWQSLADKVKQNPKVLAVAPFTQMQGLLTNNGQVQKVLLNAIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G + G++IG A LG+ +GDK+ ++P VTP GM
Sbjct: 120 EQERQVSIIDHFMQQGQLDALAPGSFGIVIGDKAATKLGVGLGDKLTFVAPEVTVTPAGM 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
R K +TV+G+F + + D + +LQ+ + + V G+ + D +T
Sbjct: 180 FPRMKRFTVVGIFHVGAGEIDGYLGLTNLQDLGRLHRWKADQVQGLRLKFDDLFQAPRTA 239
Query: 242 ENIVRILGNG-VVVIDWQQRYQIFFSCY 268
I + LG DW + + +
Sbjct: 240 WEIAQQLGENHYYARDWTRTHGNLYQAI 267
>gi|294624870|ref|ZP_06703527.1| ABC transporter-type lipoprotein-releasing protein [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 11122]
gi|292600829|gb|EFF44909.1| ABC transporter-type lipoprotein-releasing protein [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 11122]
Length = 413
Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats.
Identities = 65/267 (24%), Positives = 122/267 (45%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RYL + R+N FIS S S +G+ +GV LI ++VM+GF++++ R+L
Sbjct: 1 MFKPIPVAIGLRYLRAKRRNGFISFISMASILGIALGVTVLITTLAVMSGFQKEIRDRLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + + P+ D+Q P V P++ ++ + G + V +
Sbjct: 61 QMAAHATVSAEGAPMRDWQHAVEVAMSDPRVAGAAPYIETESLLQGPRKQPAIVRGVIPA 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G+V + ++IGK+L LG+ +GD I +L TP+G
Sbjct: 121 EEGKVSVLAKKMQQ-GSVDSLTPGSYNIVIGKELGLWLGVDVGDSIVVLLSDTQATPLGA 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV G+F + + D G+ +++Q+ + + V+G+ + + D D
Sbjct: 180 MPRLKRFTVSGIFEAGYNEIDRGLAVVNMQDLARVLRM-DGVTGVRLRLHDMDQAWPVAR 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ L V DW Q + +
Sbjct: 239 DLAVKLHGPYRVSDWTQENANLYHSLK 265
>gi|254523972|ref|ZP_05136027.1| lipoprotein releasing system transmembrane protein
[Stenotrophomonas sp. SKA14]
gi|219721563|gb|EED40088.1| lipoprotein releasing system transmembrane protein
[Stenotrophomonas sp. SKA14]
Length = 413
Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats.
Identities = 64/263 (24%), Positives = 125/263 (47%), Gaps = 2/263 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RYL + R+N FIS S S +G+ +GV LI ++VM+GF++++ R+L
Sbjct: 1 MFKPIPVAIGLRYLRAKRRNGFISFISMASILGIALGVTVLITTLAVMSGFQKEIRSRLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I + P+ D+ + + P V P++ Q+ +SG G+ + +
Sbjct: 61 QMTAHTTISRDGEPMPDWMRVVDIASKDPRVAGAAPYIEIQSMISGPRVQGAIIQGIDPA 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G+ + +++GK+LA LG+ +GD++ + TP G
Sbjct: 121 LEPKVSV-IDKKVTKGSYDSLKPGSFNLLLGKELAIWLGVDVGDQVLVTFAEVQGTPAGA 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV G+F + + D G+ + ++Q+ + + +G+ + + D D +
Sbjct: 180 VPRMKRFTVSGIFEAGYNEVDRGVGFANMQDLERVLR-SDGATGVRLKLHDMDRSLEVGV 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFF 265
++ + LG V DW Q+ +
Sbjct: 239 DLAQSLGGAYRVSDWTQQNANLY 261
>gi|206889294|ref|YP_002249050.1| ABC transporter, permease protein [Thermodesulfovibrio yellowstonii
DSM 11347]
gi|206741232|gb|ACI20289.1| ABC transporter, permease protein [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 401
Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats.
Identities = 83/265 (31%), Positives = 131/265 (49%), Gaps = 4/265 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
R +A RYL S +K +S + IS G+ +GVMALIVV+SV++GF ED+ K++LG
Sbjct: 1 MRLPFFIALRYLKSRKKG--LSFGAVISISGIALGVMALIVVISVVSGFHEDLQKKILGT 58
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H V+ + DY+ + + L ++ PF+ GQ +S L I
Sbjct: 59 QAHAVLLSYSGGISDYKTMMDFLSKKNEIQACSPFIMGQVLISSGKRAHGVYLRGIIPEY 118
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
D + Y ++ +IIGK+LA LG+ GD I ++SP G + P+G+
Sbjct: 119 DRKTTEIFKYIKYK--YENYTELPWIIIGKELANMLGVLPGDTITVISPMGTMGPLGIIP 176
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ K + V G+F + +YD +V L+ AQ +F N V+GI++ +KD + I
Sbjct: 177 KVKKFIVTGIFEIGMFEYDMNLVITDLKIAQDFFEYGNKVTGIQLRLKDVYKANFISQAI 236
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ L V DW Q + FS +
Sbjct: 237 TKELDGEFYVKDWMQMNKNLFSALK 261
>gi|332107764|gb|EGJ08988.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Rubrivivax benzoatilyticus JA2]
Length = 418
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 81/271 (29%), Positives = 133/271 (49%), Gaps = 5/271 (1%)
Query: 3 IFSRFEVIVAWRYLFSNR---KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E V WRY + R +N FIS S IS +G+ +GV ALI+V+SVMNGF++++
Sbjct: 1 MNLPYEWHVGWRYTRAGRAGRRNGFISFISAISVLGITLGVAALIIVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPL-VDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
R+L + V I + D+Q A P+V+ PFV+ Q V V+
Sbjct: 61 RMLSVISAVEIHEAGGGALPDWQATAAAARARPEVVGAAPFVAAQTLVGRGDVLRGAVVR 120
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
++ + + ++ +IG +LAR LG+ +GD I I +P G T
Sbjct: 121 GIEPAAEAEITELAQRLRDRELAALQPGQWHAVIGAELARLLGVRVGDTITIAAPGGQFT 180
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
P G+ R K +TV G F +YD+G+V ++L +A F +G+++ + D
Sbjct: 181 PAGVVPRLKQFTVSGTFEAGHYEYDSGLVLIALDDAARLFQTGGP-TGVQLKLADVHQAR 239
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + + LG VVV DW Q + +F +
Sbjct: 240 RVGDELAQALGPAVVVRDWTQTNRNWFDAVQ 270
>gi|294665033|ref|ZP_06730340.1| ABC transporter-type lipoprotein-releasing protein [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 10535]
gi|292605190|gb|EFF48534.1| ABC transporter-type lipoprotein-releasing protein [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 10535]
Length = 413
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 66/267 (24%), Positives = 123/267 (46%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RYL + R+N FIS S S +G+ +GV LI ++VM+GF++++ R+L
Sbjct: 1 MFKPIPVAIGLRYLRAKRRNGFISFISMASILGIALGVTVLITTLAVMSGFQKEIRDRLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + + P+ D+Q P V P++ ++ + G + V +
Sbjct: 61 QMAAHATVSAEGAPMRDWQHAVEVAMSDPRVAGAAPYIGTESLLQGPRKQPAIVRGVIPA 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G+V + ++IGK+LA LG+ +GD I +L TP+G
Sbjct: 121 EEGKVSVLAKKMQQ-GSVDSLTPGSYNIVIGKELALWLGVDVGDSIVVLLSDTQATPLGA 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV G+F + + D G+ +++Q+ + + V+G+ + + D D
Sbjct: 180 MPRLKRFTVSGIFEAGYNEIDRGLAVVNMQDLARVLRM-DGVTGVRLRLHDMDQAWPVAR 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ L V DW Q + +
Sbjct: 239 DLAVKLHGPYRVSDWTQENANLYHSLK 265
>gi|225848139|ref|YP_002728302.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Sulfurihydrogenibium azorense Az-Fu1]
gi|225643681|gb|ACN98731.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Sulfurihydrogenibium azorense Az-Fu1]
Length = 403
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 78/267 (29%), Positives = 134/267 (50%), Gaps = 4/267 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + ++ RYL S + N +S + +S +GVM+GV ALIV +SVMNGF + ++L
Sbjct: 1 MKLPLYLKISLRYLLSIKSN-LLSFMTVVSIVGVMLGVAALIVTLSVMNGFMFGLKSKLL 59
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H++I + DY + ++ P V+ PF+ Q +S S + +
Sbjct: 60 QTTPHIMILKADEKFDDYNQLIQKIKQNPQVLDYQPFIYTQGILSKDSKVSAVYVRGVDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
D ++L GN + VIIGKDLA LGI++GD++N++SP G TP+G
Sbjct: 120 EKDKNFLALDKRIILGNYDLSDEC---VIIGKDLAIMLGITVGDQVNLMSPVGRKTPLGF 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ K V G+ + +Y+ V +L AQ +F++ ++++ I++ +KDP E
Sbjct: 177 LPKIKPVKVCGIADLGIYEYNASFVATNLSFAQNFFDMGDSITAIQLKLKDPFKAEAVKS 236
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+I ++L +V W + F E
Sbjct: 237 DIEKVLEFPYIVKSWMDMNKSLFQALE 263
>gi|94309985|ref|YP_583195.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Cupriavidus metallidurans CH34]
gi|93353837|gb|ABF07926.1| outer membrane-specific lipoprotein transporter subunit ; membrane
component of ABC superfamily [Cupriavidus metallidurans
CH34]
Length = 416
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 70/271 (25%), Positives = 140/271 (51%), Gaps = 5/271 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + WRY ++++ N FIS S IS +G+ +GV ALIVV+SVMNGF++++
Sbjct: 1 MNFPYEWQIGWRYTRASKRASRNTFISFISMISMMGIALGVAALIVVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + H+ + PL D+Q A +V+ P+V+ QA ++ +L
Sbjct: 61 RMLSVLSHIEV-IGAAPLTDWQKTAAEALRNKEVVGAAPYVAAQAMMTREDVVRGVLLRG 119
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + G+++ G G+ +G +LA LG+ +GDK+ ++ P G +TP
Sbjct: 120 VDPAEEPKVSDIANQFRAGSMNALAPGGFGIALGSELANALGVRVGDKVMLVVPQGTITP 179
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
GM R K +TV G+F ++D+ + +++ +A+ F +G+ + ++D +
Sbjct: 180 AGMLPRLKQFTVAGVFSSGHYEFDSALALINIGDAETLFRQSGP-TGVRLKLQDMQRAPQ 238
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ + + + + DW ++ + +F+ ++
Sbjct: 239 VAQELAGTMSGDLYLRDWSKQNRNWFAAVQT 269
>gi|256831143|ref|YP_003159871.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Desulfomicrobium baculatum DSM 4028]
gi|256580319|gb|ACU91455.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Desulfomicrobium baculatum DSM 4028]
Length = 409
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 85/267 (31%), Positives = 144/267 (53%), Gaps = 4/267 (1%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
FE+ V+ RYL + RK AFIS+ S IS +GV IGV +LIVV+ VMNGF E++ ++LGIN
Sbjct: 3 FELFVSLRYLLARRKQAFISVISLISVLGVAIGVASLIVVLGVMNGFSENLRDKILGINS 62
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
H+++ + +Y + + + V+ PF+ + +S S VL S
Sbjct: 63 HLILGSVKQTIGNYDQLVQKSLQVDGVVAATPFIYYEVMLSTPSGVKGVVLRGVSPQSAG 122
Query: 127 SYLQNSFSRFYGNVSND--FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ L G++++ G++IGK+LA LG+++G ++++L+P G + G
Sbjct: 123 TVLSVEKDLISGSLADLAGNGDTPGIVIGKELASRLGLTLGSRLSLLAPSGKKSAAGFSP 182
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTHEN 243
+ + V+G+F +YD+ + ++S+ EAQ E V+GIE V D D ++K E
Sbjct: 183 KIVFFNVVGIFSSGMFEYDSSLAFVSIPEAQKILGFEGDFVTGIEYKVSDIDGVQKIGEA 242
Query: 244 IVRILGN-GVVVIDWQQRYQIFFSCYE 269
+VR LG + +W + Q F+ +
Sbjct: 243 LVRALGGFPLYSRNWIEMNQNLFAALK 269
>gi|225075253|ref|ZP_03718452.1| hypothetical protein NEIFLAOT_00256 [Neisseria flavescens
NRL30031/H210]
gi|224953428|gb|EEG34637.1| hypothetical protein NEIFLAOT_00256 [Neisseria flavescens
NRL30031/H210]
Length = 416
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 67/268 (25%), Positives = 128/268 (47%), Gaps = 2/268 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ E + RYL + ++N F+S + IS G+ +GV ALIVV+SVMNGF++++ ++L
Sbjct: 1 MASLETWIGLRYLRAKKRNGFMSFITMISIAGIALGVTALIVVLSVMNGFQKEIRGQLLN 60
Query: 64 INGH-VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + +Q + + +V+ P+VS QA ++ + +
Sbjct: 61 VAPHAEIGYYDVGSAPGWQNLREFVKGKKEVLASAPYVSDQALLANAGEVRGVQIRGILP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + + G+ + +I+G+ LA LG IG K+ +++P G+VTP G+
Sbjct: 121 SEEKNVVDYGKDMPAGSFDDLKPGEFDIILGQGLAEALGTEIGGKVTVITPEGNVTPAGV 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK-TH 241
R K + V+G+ + + DN + +++AQ+ + L V G+ + + DP
Sbjct: 181 VPRLKQFNVVGVVKTGVYEVDNTLAMTHIKDAQVLYRLGENVGGLRLRLADPQNAPSFIA 240
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I + V DW + +F E
Sbjct: 241 KLIPDTKKDEVWARDWTFNNRSYFEAVE 268
>gi|317153109|ref|YP_004121157.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Desulfovibrio aespoeensis Aspo-2]
gi|316943360|gb|ADU62411.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Desulfovibrio aespoeensis Aspo-2]
Length = 409
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 92/269 (34%), Positives = 142/269 (52%), Gaps = 4/269 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
RFE VA RYLF+ R+ AFIS+ S + GV IGV ALIVV+ VMNGF D+ ++LG+
Sbjct: 1 MRFETFVALRYLFALRRQAFISVISLFAVFGVAIGVGALIVVIGVMNGFSTDLRNKILGV 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N H+++ + DY+ +A+ +P VI V PF+ + +S S VL +
Sbjct: 61 NAHILVTSLRGGIKDYRNLADEATQVPGVIGVTPFIYSEVILSTRSGVKGVVLRGIDPTT 120
Query: 125 DFSYLQNSFSRFYGNVSND--FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S L S G ++N G+IIG +LA LG++ G ++N+LSP G G
Sbjct: 121 SDSVLSLSKDMISGGLANLDANVDKPGIIIGSELANRLGLAQGSEVNLLSPSGRAGSAGF 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFN-LENAVSGIEVFVKDPDAIEKTH 241
+ + + V G+FR +YD+ + Y+++ A+ E+ VSG+E+ V D +E
Sbjct: 181 TPKIRPFLVAGIFRTGMFEYDSSLGYVTIPAARQLLGFKEDVVSGLEISVNDVYNVEHIS 240
Query: 242 ENIVRILGN-GVVVIDWQQRYQIFFSCYE 269
E + +G+ V V WQ+ F+ E
Sbjct: 241 ELLRERVGSFTVYVRHWQEMNANLFAALE 269
>gi|78047804|ref|YP_363979.1| ABC transporter-type lipoprotein-releasing protein [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|325928371|ref|ZP_08189566.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Xanthomonas perforans 91-118]
gi|78036234|emb|CAJ23925.1| ABC transporter-type lipoprotein-releasing protein [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|325541247|gb|EGD12794.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Xanthomonas perforans 91-118]
Length = 413
Score = 144 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 66/267 (24%), Positives = 123/267 (46%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RYL + R+N FIS S S +G+ +GV LI ++VM+GF++++ R+L
Sbjct: 1 MFKPIPVAIGLRYLRAKRRNGFISFISMASILGIALGVTVLITTLAVMSGFQKEIRDRLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + + P+ D+Q P V P++ ++ + G + V +
Sbjct: 61 QMAAHATVSAEGAPMRDWQHAVEVAMSDPRVAGAAPYIETESLLQGPRKQPAIVRGVIPA 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G+V + ++IGK+LA LG+ +GD I +L TP+G
Sbjct: 121 EEGKVSVLAKKMQQ-GSVDSLTPGSYNIVIGKELALWLGVDVGDSIVVLLSDTQATPLGA 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV G+F + + D G+ +++Q+ + + V+G+ + + D D
Sbjct: 180 MPRLKRFTVSGIFEAGYNEIDRGLAVVNMQDLARVLRM-DGVTGVRLRLHDMDQAWPVAR 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ L V DW Q + +
Sbjct: 239 DLAVKLHGPYRVSDWTQENANLYHSLK 265
>gi|152985881|ref|YP_001347545.1| hypothetical protein PSPA7_2173 [Pseudomonas aeruginosa PA7]
gi|150961039|gb|ABR83064.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
Length = 416
Score = 144 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 73/268 (27%), Positives = 129/268 (48%), Gaps = 3/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RY + R++ F+S S S IG+ +GV+ +IVV+SVMNGF +M R+L
Sbjct: 1 MFRPLSVFIGTRYTRAKRRSHFVSFISLTSMIGLALGVLVMIVVLSVMNGFDREMRTRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ P+ D++ +A ++ V V PF Q +S + + ++
Sbjct: 61 GMVPQATVESYQ-PIDDWRALAEKVKAHEHVTAVAPFTQMQGMLSANGAVQTVMVDAVDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G+++ G G++IG+ A+ LG+ IGDK+ ++ P VTP G+
Sbjct: 120 REEAKVSIIPDFFKQGSLAELKAGGFGIVIGQLAAQKLGVGIGDKVTLILPEVAVTPAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
R K +TV+G FR+ + D G+ + L++A + N V G+ + + D +
Sbjct: 180 FPRMKRFTVVGTFRVGAGELDGGLSLIHLEDAARLQRWKTNQVQGLRLKLDDLFQAPRVA 239
Query: 242 ENIVRIL-GNGVVVIDWQQRYQIFFSCY 268
I R L N DW + + +
Sbjct: 240 WEIARTLTDNDFYARDWTRSHGNLYQAI 267
>gi|145298865|ref|YP_001141706.1| lipoprotein releasing system transmembrane protein LolE [Aeromonas
salmonicida subsp. salmonicida A449]
gi|142851637|gb|ABO89958.1| lipoprotein releasing system transmembrane protein LolE [Aeromonas
salmonicida subsp. salmonicida A449]
Length = 411
Score = 144 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 63/271 (23%), Positives = 112/271 (41%), Gaps = 6/271 (2%)
Query: 1 MS--IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMI 58
M +F + + RY S R N F+S S S G+ IGV AL+VV+SVMNGF +
Sbjct: 1 MKTGLFQPLSLAIGLRYAGSRRSNRFVSFISLFSTFGIAIGVAALMVVISVMNGFEGQLK 60
Query: 59 KRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
R+LG+ HVV+ + + + L +P VI P + + + +
Sbjct: 61 GRILGVIPHVVVTNQTDRIDAHPDGLPDLAKLPHVIASAPMLDSEGMLQSPGQLIGVSVQ 120
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
G + + +++G+ +A L +S+GD++ +L G
Sbjct: 121 GIDPAQWPKDDILHAQMQMGRLDSLQQGEYHIVLGQGVASRLKVSMGDQVRLLLTEGTRF 180
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAI 237
+ ++ + D D+ + ++L +AQ L V GI +++ DP A
Sbjct: 181 TPFGRVPAQRLFTVSGIFGVGADVDSQVALVALGDAQRLLRLPTETVGGIRLWLDDPFAA 240
Query: 238 EKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
++ I L +G+ DW++ F
Sbjct: 241 DQV---IKTALPDGLEWQDWRRERGELFQAV 268
>gi|325917577|ref|ZP_08179777.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Xanthomonas vesicatoria ATCC 35937]
gi|325536211|gb|EGD08007.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Xanthomonas vesicatoria ATCC 35937]
Length = 413
Score = 144 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 65/267 (24%), Positives = 124/267 (46%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RYL + R+N FIS S S +G+ +GV LI ++VM+GF++++ R+L
Sbjct: 1 MFKPIPVAIGLRYLRAKRRNGFISFISMASILGIALGVTVLITTLAVMSGFQKEIRDRLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + + P+ D+Q P V P++ ++ + G + V +
Sbjct: 61 QMAAHATVSAEGAPMRDWQHAVEVAMADPRVAGAAPYIETESLLQGPRKQPAIVRGIVPA 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + G+V + ++IGK+LA LG+ +GD + +L TP+G
Sbjct: 121 EENKVSVLAKKMQQ-GSVDSLTPGSYNIVIGKELALWLGVDVGDSVVVLLSDTQATPLGA 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV G+F + + D G+ +++Q+ + + V+G+ + + D D
Sbjct: 180 MPRLKRFTVSGIFEAGYNEIDRGLAVVNMQDLARVLRM-DGVTGVRLRLHDMDQAWNVAR 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ L V DW Q + +
Sbjct: 239 DLALKLHGPYRVSDWTQENANLYHSLK 265
>gi|29654316|ref|NP_820008.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Coxiella burnetii RSA 493]
gi|154706948|ref|YP_001424419.1| lipoprotein releasing system transmembrane protein [Coxiella
burnetii Dugway 5J108-111]
gi|161830817|ref|YP_001596715.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Coxiella burnetii RSA 331]
gi|212212567|ref|YP_002303503.1| lipoprotein releasing system transmembrane protein [Coxiella
burnetii CbuG_Q212]
gi|29541583|gb|AAO90522.1| lipoprotein releasing system transmembrane protein [Coxiella
burnetii RSA 493]
gi|154356234|gb|ABS77696.1| lipoprotein releasing system transmembrane protein [Coxiella
burnetii Dugway 5J108-111]
gi|161762684|gb|ABX78326.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Coxiella burnetii RSA 331]
gi|212010977|gb|ACJ18358.1| lipoprotein releasing system transmembrane protein [Coxiella
burnetii CbuG_Q212]
Length = 414
Score = 144 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 64/267 (23%), Positives = 128/267 (47%), Gaps = 3/267 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + V RY + R+N FIS S +S +G+ +GV LI V+SVMNGF ++
Sbjct: 1 MIRPLALYVGLRYTRAKRRNHFISFISLVSMLGIALGVAVLITVLSVMNGFDYEIRTHFF 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ V + + + + P+V+ PFV+G +S ++ +
Sbjct: 61 ALAPQVTVMTGQNIEKTWPELQKTIASNPEVVASAPFVTGMGLLSNEGIVSGATVLGVVP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + Q G +S+ +I+G+ LA LG+SIGDK+++ +P TP+G+
Sbjct: 121 SQEKKVSQLDGKLVGGKLSSLNPGSYNIILGRKLADQLGLSIGDKVSLFTPQTTTTPLGI 180
Query: 183 GIRSKSYTVLGMFRMRF-PDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ + +T+ G+F + +D G+ Y+++Q+ F+ SG+ + +K+ +
Sbjct: 181 FPQFRRFTISGIFSTKSGFGFDAGIAYINMQDGFRLFSQ--GASGLHIKIKNLYQAQSVT 238
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + ++L +V +W +++ FF
Sbjct: 239 QQLQKLLPGEFIVTNWTEQFGSFFKAI 265
>gi|332039127|gb|EGI75549.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Hylemonella gracilis ATCC 19624]
Length = 427
Score = 144 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 77/280 (27%), Positives = 133/280 (47%), Gaps = 14/280 (5%)
Query: 3 IFSRFEVIVAWRYLFSNR---KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E+ + WRY + R +N FIS S +S +G+ +GV ALI+V+SVMNGF++++
Sbjct: 1 MEWPYELSLGWRYTRAGRATRRNGFISFISGVSMLGIALGVAALIIVLSVMNGFQKEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+LG+ H+ I + L + + G ++R
Sbjct: 61 RMLGVVSHIEIYSADGLALPDAGRTLELVRQHPQVVGAAPFIAAQALLARGEDMKGAVLR 120
Query: 120 GISNSDFSYLQNSFSRFYGNV------SNDFDRGKGVIIGKDLARNLGISIGDKINILSP 173
GI + + G G+++G++LAR LG+ +GD + +++P
Sbjct: 121 GIVPGLEGQVTDLAEGLQGEAGNARVLERLVPGEFGIVLGRELARQLGVRVGDPVTLIAP 180
Query: 174 YGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKD 233
G VTP G+ R K TV+G+F +YD G+ M + +A F LE +GI V +KD
Sbjct: 181 SGQVTPAGVLPRMKQMTVVGLFHSGHYEYDAGLALMHVADAARIFRLEG-ATGIRVKLKD 239
Query: 234 PDAIEKTHENIVRIL----GNGVVVIDWQQRYQIFFSCYE 269
+ ++V L + +VV DW Q+ + +F+ +
Sbjct: 240 LHQAREVASDLVISLTRQQNHDLVVRDWTQQNRTWFAAVQ 279
>gi|270157792|ref|ZP_06186449.1| lipoprotein-releasing system transmembrane protein LolC/E
[Legionella longbeachae D-4968]
gi|269989817|gb|EEZ96071.1| lipoprotein-releasing system transmembrane protein LolC/E
[Legionella longbeachae D-4968]
Length = 423
Score = 144 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 74/268 (27%), Positives = 133/268 (49%), Gaps = 3/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY + +KN F+S S S +G+ +GVM LI V+SVMNGF + + KR
Sbjct: 10 MYKPLALFMGLRYTRARKKNHFVSFISLSSMLGIGLGVMVLITVLSVMNGFDQQIHKRFF 69
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ + + L ++ IA +++ IP++ PFV GQ + VL +
Sbjct: 70 GMAPEITVSGPNERLNNWPEIAKKIETIPEIKAFSPFVGGQGLLVHDGQVLPIVLTGVLP 129
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G+++N + G+I+G+ LA ++G IGDK+ ++ P VTP GM
Sbjct: 130 QEEEKMSHLQDKLLAGDINNL--KDFGIILGRGLADSMGTMIGDKVTVMIPQATVTPAGM 187
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGM-VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
R K +TV+G+F + +++L +AQ + N V+GI++ + + +
Sbjct: 188 IPRFKRFTVVGVFSAGTGFNFDTKLAFINLGDAQKLLQMGNDVTGIKMKIDNVYQAPELS 247
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ +LG V +W ++Y FF +
Sbjct: 248 SRLSHLLGEEYQVGNWTEQYGSFFQAVK 275
>gi|289163940|ref|YP_003454078.1| outer membrane-specific lipoprotein transporter subunit ; membrane
component of ABC superfamily [Legionella longbeachae
NSW150]
gi|288857113|emb|CBJ10928.1| outer membrane-specific lipoprotein transporter subunit ; membrane
component of ABC superfamily [Legionella longbeachae
NSW150]
Length = 414
Score = 144 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 74/268 (27%), Positives = 133/268 (49%), Gaps = 3/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY + +KN F+S S S +G+ +GVM LI V+SVMNGF + + KR
Sbjct: 1 MYKPLALFMGLRYTRARKKNHFVSFISLSSMLGIGLGVMVLITVLSVMNGFDQQIHKRFF 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ + + L ++ IA +++ IP++ PFV GQ + VL +
Sbjct: 61 GMAPEITVSGPNERLNNWPEIAKKIETIPEIKAFSPFVGGQGLLVHDGQVLPIVLTGVLP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G+++N + G+I+G+ LA ++G IGDK+ ++ P VTP GM
Sbjct: 121 QEEEKMSHLQDKLLAGDINNL--KDFGIILGRGLADSMGTMIGDKVTVMIPQATVTPAGM 178
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGM-VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
R K +TV+G+F + +++L +AQ + N V+GI++ + + +
Sbjct: 179 IPRFKRFTVVGVFSAGTGFNFDTKLAFINLGDAQKLLQMGNDVTGIKMKIDNVYQAPELS 238
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ +LG V +W ++Y FF +
Sbjct: 239 SRLSHLLGEEYQVGNWTEQYGSFFQAVK 266
>gi|15598184|ref|NP_251678.1| hypothetical protein PA2988 [Pseudomonas aeruginosa PAO1]
gi|107102537|ref|ZP_01366455.1| hypothetical protein PaerPA_01003601 [Pseudomonas aeruginosa PACS2]
gi|116050991|ref|YP_790185.1| hypothetical protein PA14_25430 [Pseudomonas aeruginosa UCBPP-PA14]
gi|218890813|ref|YP_002439677.1| putative lipoprotein releasing system, permease protein
[Pseudomonas aeruginosa LESB58]
gi|254235963|ref|ZP_04929286.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|254241694|ref|ZP_04935016.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|296388519|ref|ZP_06877994.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas aeruginosa PAb1]
gi|313108277|ref|ZP_07794309.1| hypothetical protein PA39016_001330003 [Pseudomonas aeruginosa
39016]
gi|9949088|gb|AAG06376.1|AE004724_5 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|115586212|gb|ABJ12227.1| putative lipoprotein releasing system, permease protein
[Pseudomonas aeruginosa UCBPP-PA14]
gi|126167894|gb|EAZ53405.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126195072|gb|EAZ59135.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|218771036|emb|CAW26801.1| putative lipoprotein releasing system, permease protein
[Pseudomonas aeruginosa LESB58]
gi|310880811|gb|EFQ39405.1| hypothetical protein PA39016_001330003 [Pseudomonas aeruginosa
39016]
Length = 416
Score = 144 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 73/268 (27%), Positives = 129/268 (48%), Gaps = 3/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RY + R++ F+S S S IG+ +GV+ +IVV+SVMNGF +M R+L
Sbjct: 1 MFRPLSVFIGTRYTRAKRRSHFVSFISLTSMIGLALGVLVMIVVLSVMNGFDREMRTRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ P+ D++ +A ++ V V PF Q +S + + ++
Sbjct: 61 GMVPQATVESYQ-PIDDWRALAEKVKAHEHVTAVAPFTQMQGMLSANGAVQTVMVDAVDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G+++ G G++IG+ A+ LG+ IGDK+ ++ P VTP G+
Sbjct: 120 LEEAKVSIIPDFFKQGSLAELKAGGFGIVIGQLAAQKLGVGIGDKVTLILPEVAVTPAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
R K +TV+G FR+ + D G+ + L++A + N V G+ + + D +
Sbjct: 180 FPRMKRFTVVGTFRVGAGELDGGLSLIHLEDAARLQRWKTNQVQGLRLKLDDLFQAPRVA 239
Query: 242 ENIVRIL-GNGVVVIDWQQRYQIFFSCY 268
I R L N DW + + +
Sbjct: 240 WEIARTLTDNDFYARDWTRSHGNLYQAI 267
>gi|330808521|ref|YP_004352983.1| Liporotein ABC transporter, permease component [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327376629|gb|AEA67979.1| Liporotein ABC transporter, permease component [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 414
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+N F+S S S IG+ +GV+A+IVV+SVMNGF+ +M R+L
Sbjct: 1 MFRPLSIFIGTRYTRAKRRNRFVSFISMTSMIGLALGVLAMIVVLSVMNGFQREMSSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I P+ D+Q +A P+V +PF + +S S +
Sbjct: 61 GMVPHATI-VGVNPIDDWQPVAAAALKNPEVTAAVPFTEMEGMLSHKGSMQPIQISGVDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G + GV+IG+ AR +++GDKI ++ P P G+
Sbjct: 120 AQEGKVSIVAQHIVQGRLDALKPGEFGVVIGEITARRFRLNVGDKITLIVPEVSTAPGGI 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + V+G+F++ + + AQ+ N V + + VKD A K
Sbjct: 180 TPRMQRLNVVGVFKVGAELDGSMALIHLADAAQMQHWQPNQVQSVRLAVKDLYAAPKVSG 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+I LG DW FS +
Sbjct: 240 DIATGLGAAYKADDWTHTQGSLFSAMK 266
>gi|329114695|ref|ZP_08243454.1| Lipoprotein-releasing system transmembrane protein LolC
[Acetobacter pomorum DM001]
gi|326696175|gb|EGE47857.1| Lipoprotein-releasing system transmembrane protein LolC
[Acetobacter pomorum DM001]
Length = 415
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 81/268 (30%), Positives = 141/268 (52%), Gaps = 2/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F FE VA RYL + R F+S+ + S +G+ +GV LI+VM+VMNGF+ D++ R+L
Sbjct: 1 MFGPFERAVAGRYLRARRGERFVSVIAIFSLVGIALGVATLIIVMAVMNGFQADLMGRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+NG + I + + Y+ I +++ +P V+ +P V GQ +S + SG +V G++
Sbjct: 61 GLNGDLTIYGQGRTISQYEDITHKVRSVPGVVSAIPLVEGQVLLSAGAYN-SGGMVHGLT 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
L+ S +DF +++G +A G+ IG + ++SP G T G
Sbjct: 120 PQGLRDLKAVSSSIIAGSLDDFGPDDSIVVGVTMAERAGLGIGSGLTLVSPDGAATAFGT 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + Y V+ +F DY++ +V++ + AQ+YF + N + I+V KD + +
Sbjct: 180 VPRVRRYRVVAIFDAGVNDYNSSVVFLPMHAAQIYFQMPNKATQIQVMTKDAEHVRPVTL 239
Query: 243 NIVRILGN-GVVVIDWQQRYQIFFSCYE 269
I +G+ G+ V+DW F +
Sbjct: 240 AIENAVGDPGLRVLDWTNANNALFGAVQ 267
>gi|296112874|ref|YP_003626812.1| lipoprotein ABC transporter permease protein LolC/E [Moraxella
catarrhalis RH4]
gi|295920568|gb|ADG60919.1| lipoprotein ABC transporter permease protein LolC/E [Moraxella
catarrhalis RH4]
gi|326564461|gb|EGE14688.1| lipoprotein ABC transporter permease protein LolC/E [Moraxella
catarrhalis 103P14B1]
gi|326564562|gb|EGE14787.1| lipoprotein ABC transporter permease protein LolC/E [Moraxella
catarrhalis 12P80B1]
gi|326571387|gb|EGE21402.1| lipoprotein ABC transporter permease protein LolC/E [Moraxella
catarrhalis BC7]
gi|326575331|gb|EGE25259.1| lipoprotein ABC transporter permease protein LolC/E [Moraxella
catarrhalis CO72]
gi|326576585|gb|EGE26492.1| lipoprotein ABC transporter permease protein LolC/E [Moraxella
catarrhalis 101P30B1]
gi|326577398|gb|EGE27282.1| lipoprotein ABC transporter permease protein LolC/E [Moraxella
catarrhalis O35E]
Length = 414
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 61/267 (22%), Positives = 116/267 (43%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + RKN FIS SFIS IG+ +GV LI V+SVMNGF ++ R+L
Sbjct: 1 MFRPLALFIGLRYTKAKRKNGFISFISFISTIGLTLGVAVLITVLSVMNGFDREIKSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ + + P+V V P++ Q ++ V+
Sbjct: 61 GMVPQASVTSTEILTNWQELAEKIKMQNPEVQAVAPYIQLQGMLTAEGQVTGIVVSGIEP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + GN+ + G+I+G+ + ++G+ +GDK+ ++ P + G+
Sbjct: 121 DYEKQVSIIDEHMTAGNLDDLHIGEFGIILGESIVSDMGLKLGDKVTLVLPEASPSAAGV 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +T++G++ + M ++ +++A + L G+ + + D +
Sbjct: 181 IPRFKRFTLVGVYHISSEIDGM-MGFVRMRDAGVMLRLPEGAQGLRMKLNDIFKAPQVAN 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
N I + DW + FS +
Sbjct: 240 NAAGIDSLPLFPSDWTTTHGNLFSAIQ 266
>gi|146282982|ref|YP_001173135.1| lipoprotein releasing system, permease protein [Pseudomonas
stutzeri A1501]
gi|145571187|gb|ABP80293.1| lipoprotein releasing system, permease protein [Pseudomonas
stutzeri A1501]
Length = 431
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 70/268 (26%), Positives = 122/268 (45%), Gaps = 2/268 (0%)
Query: 2 SIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
S+F V + RY + R++ F+S S S IG+ +GV+ +IVV+SVMNGF +M RV
Sbjct: 16 SMFRPLSVYIGARYTRARRRSLFVSFISLTSMIGLALGVLVMIVVLSVMNGFDHEMRTRV 75
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
LG+ H I + P+ D+Q + RL+ V+ PF+ Q ++ ++
Sbjct: 76 LGMVPHATI-ESPTPINDWQALGARLEQHAQVLASAPFIQSQGLLTHQGQVTKILINAVE 134
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
++ G + + G++IG A LG+++GDKI ++P VTP G
Sbjct: 135 PQAERQVSIIDQFFREGALDDLKPGEFGIVIGDKAAAKLGVAVGDKITFVAPEVTVTPAG 194
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLY-FNLENAVSGIEVFVKDPDAIEKT 240
M R K +TV G+F + + D + ++ + + V G+ + D +
Sbjct: 195 MFPRMKRFTVTGIFHVGAGEIDGYVALANIADMARLQRWQPDQVQGLRLRFADLFQAPRI 254
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ LG+ DW + + +
Sbjct: 255 AWELAGQLGDDFYSRDWTRTHGNLYQAI 282
>gi|84623839|ref|YP_451211.1| lipoprotein releasing system transmembrane protein [Xanthomonas
oryzae pv. oryzae MAFF 311018]
gi|166712281|ref|ZP_02243488.1| lipoprotein releasing system transmembrane protein [Xanthomonas
oryzae pv. oryzicola BLS256]
gi|289669021|ref|ZP_06490096.1| lipoprotein releasing system transmembrane protein [Xanthomonas
campestris pv. musacearum NCPPB4381]
gi|84367779|dbj|BAE68937.1| lipoprotein releasing system transmembrane protein [Xanthomonas
oryzae pv. oryzae MAFF 311018]
Length = 413
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 65/267 (24%), Positives = 123/267 (46%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RYL + R+N FIS S S +G+ +GV LI ++VM+GF++++ R+L
Sbjct: 1 MFKPIPVAIGLRYLRAKRRNGFISFISMASILGIALGVTVLITTLAVMSGFQKEIRDRLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + + P+ D+Q P V P++ ++ + G + V +
Sbjct: 61 QMAAHATVSAEGAPMRDWQHAVEVAMSDPRVAGAAPYIETESLLQGPRKQPAIVRGVIPA 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G+V + ++IGK+LA LG+ +GD + +L TP+G
Sbjct: 121 EEGKVSVLAKKMQQ-GSVDSLTPGSYNIVIGKELALWLGVDVGDSVVVLLSDTQATPLGA 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV G+F + + D G+ +++Q+ + + V+G+ + + D D
Sbjct: 180 MPRLKRFTVSGIFEAGYNEIDRGLAVVNMQDLARVLRM-DGVTGVRLRLHDMDQAWPVAR 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ L V DW Q + +
Sbjct: 239 DLAVKLHGPYRVSDWTQENANLYHSLK 265
>gi|56707553|ref|YP_169449.1| lipoprotein releasing system, subunit C,putative membrane protein
[Francisella tularensis subsp. tularensis SCHU S4]
gi|110670024|ref|YP_666581.1| lipoprotein releasing system, subunit C,putative membrane protein
[Francisella tularensis subsp. tularensis FSC198]
gi|115314372|ref|YP_763095.1| lipoprotein ABC transporter ATP-binding protein [Francisella
tularensis subsp. holarctica OSU18]
gi|167009649|ref|ZP_02274580.1| lipoprotein releasing system, subunit C,putative membrane protein
[Francisella tularensis subsp. holarctica FSC200]
gi|224456621|ref|ZP_03665094.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Francisella tularensis subsp. tularensis MA00-2987]
gi|290953374|ref|ZP_06557995.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Francisella tularensis subsp. holarctica URFT1]
gi|295313378|ref|ZP_06803986.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Francisella tularensis subsp. holarctica URFT1]
gi|54112849|gb|AAV29058.1| NT02FT1680 [synthetic construct]
gi|56604045|emb|CAG45037.1| lipoprotein releasing system, subunit C,putative membrane protein
[Francisella tularensis subsp. tularensis SCHU S4]
gi|110320357|emb|CAL08420.1| lipoprotein releasing system, subunit C,putative membrane protein
[Francisella tularensis subsp. tularensis FSC198]
gi|115129271|gb|ABI82458.1| lipoprotein ABC superfamily ATP binding cassette transporter, ABC
protein [Francisella tularensis subsp. holarctica OSU18]
gi|282158708|gb|ADA78099.1| lipoprotein releasing system, subunit C,putative membrane protein
[Francisella tularensis subsp. tularensis NE061598]
Length = 420
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 70/273 (25%), Positives = 126/273 (46%), Gaps = 7/273 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY+ + ++N FISI S ISF+G+ +GV LI VMSVMNGF + + ++L
Sbjct: 1 MFKSLPLFIGLRYIRAKKRNRFISIISAISFLGISLGVAVLITVMSVMNGFDQQIKSKIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ + + Q + D+ +A ++ + + + + +SG S I
Sbjct: 61 MMVPPLKVYQLGGEVTDWPNLAKEVEKSTPSVTAVAPIVESQGLLSANSGSSTTAFVQIQ 120
Query: 123 NSDFSYLQNSFSRFYGNVSN-----DFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
+ Y V D ++G +++G LA NLG+ +GDK+ ++ P +
Sbjct: 121 GIEPKYQTKVLPIAEHIVDGKLSSLDDNQGYNIVLGSVLADNLGVKVGDKVTLIVPKISL 180
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
TP GM R K + V G+F YD +++++AQ F N+VS +++ VK+
Sbjct: 181 TPAGMIPRIKQFRVSGIF-SVSYQYDAYYAMINIKDAQKVFETGNSVSSLQLSVKNIYDA 239
Query: 238 EKTHENIVR-ILGNGVVVIDWQQRYQIFFSCYE 269
+ + + DW + FF +
Sbjct: 240 PLVKDKLNDGAIPPYYFTRDWTDENKSFFDALK 272
>gi|326564784|gb|EGE14996.1| lipoprotein ABC transporter permease protein LolC/E [Moraxella
catarrhalis 46P47B1]
gi|326567566|gb|EGE17681.1| lipoprotein ABC transporter permease protein LolC/E [Moraxella
catarrhalis BC1]
Length = 414
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 61/267 (22%), Positives = 116/267 (43%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + RKN FIS SFIS IG+ +GV LI V+SVMNGF ++ R+L
Sbjct: 1 MFRPLALFIGLRYTKAKRKNGFISFISFISTIGLTLGVAVLITVLSVMNGFDREIKSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ + + P+V V P++ Q ++ V+
Sbjct: 61 GMVPQASVTSTEILTNWQELAEKIKMQNPEVQAVAPYIQLQGMLTAEGQVTGIVVSGIEP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + GN+ + G+I+G+ + ++G+ +GDK+ ++ P + G+
Sbjct: 121 DYEKQVSIIDEHMTAGNLDDLHIGEFGIILGESIVSDMGLKLGDKVTLVLPEASPSAAGV 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +T++G++ + M ++ +++A + L G+ + + D +
Sbjct: 181 IPRFKRFTLVGVYHISSEIDGM-MGFVRMRDAGVMLRLPEGAQGLRMKLNDIFKAPQVAN 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
N I + DW + FS +
Sbjct: 240 NAAGIDSLPLFPSDWTTTHGNLFSAIQ 266
>gi|157961371|ref|YP_001501405.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Shewanella pealeana ATCC 700345]
gi|157846371|gb|ABV86870.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella pealeana ATCC 700345]
Length = 407
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 67/268 (25%), Positives = 111/268 (41%), Gaps = 2/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +RY S + NAF S + S G+++GV ALIVV SVMNG + +R+L
Sbjct: 1 MNLSLSFYIGYRYWRSRKANAFASFITIFSVSGILLGVAALIVVSSVMNGLENQLKQRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G + + ++ +L +P V P +S QA V S+ G+ +
Sbjct: 61 GAVP-QLTVHSQTAIENWPSQVEKLSQLPGVQGATPSISTQAMVQSPSNIGAAQVYGIYP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + L + + G+ VI+G +LAR L ++ GDKI ILS G V
Sbjct: 120 EQEKTLLNTTKRVYSGDFDALESGKYRVILGAELARTLDVAPGDKIRILSGDGVVYTPLG 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ + D + Y+ +AQ + V + +++ DP K
Sbjct: 180 PVPSQRKFTVAGVFEMGSQVDATLAYVHHDDAQRLMRQKAGEVKELRLYLDDPFNAAKMA 239
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+V V DW+ Y F +
Sbjct: 240 PEVVAQFATPVTTTDWRDTYGHLFGAVK 267
>gi|326561106|gb|EGE11471.1| lipoprotein ABC transporter permease protein LolC/E [Moraxella
catarrhalis 7169]
gi|326569414|gb|EGE19474.1| lipoprotein ABC transporter permease protein LolC/E [Moraxella
catarrhalis BC8]
Length = 414
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 61/267 (22%), Positives = 115/267 (43%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + RKN FIS SFIS IG+ +GV LI V+SVMNGF ++ R+L
Sbjct: 1 MFRPLALFIGLRYTKAKRKNGFISFISFISTIGLTLGVAVLITVLSVMNGFDREIKSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ + + P+V V P++ Q ++ V+
Sbjct: 61 GMVPQASVTSTEILTNWQELAEKIKMQNPEVQAVAPYIQLQGMLTAEGQVTGIVVSGIEP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + GN+ + G+I+G+ + +G+ +GDK+ ++ P + G+
Sbjct: 121 DYEKQVSIIDEHMTAGNLDDLHIGEFGIILGESIVSEMGLKLGDKVTLVLPEASPSAAGV 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +T++G++ + M ++ +++A + L G+ + + D +
Sbjct: 181 IPRFKRFTLVGVYHISSEIDGM-MGFVRMRDAGVMLRLPEGAQGLRMKLNDIFKAPQVAN 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
N I + DW + FS +
Sbjct: 240 NAAGIDSLPLFPSDWTTTHGNLFSAIQ 266
>gi|95929406|ref|ZP_01312149.1| protein of unknown function DUF214 [Desulfuromonas acetoxidans DSM
684]
gi|95134522|gb|EAT16178.1| protein of unknown function DUF214 [Desulfuromonas acetoxidans DSM
684]
Length = 417
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 73/267 (27%), Positives = 130/267 (48%), Gaps = 4/267 (1%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+E ++ RYL + RK FIS+ SFIS GV +GV ALI+V+++M GF + + +++LG
Sbjct: 3 YEWFISLRYLRARRKQTFISVISFISVTGVTLGVAALILVLAIMTGFHDGVRQQILGNVP 62
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD- 125
HV +Q + + D+ + + + + + + ++G+S+ +
Sbjct: 63 HVTVQSQGGTVSDWPQLVATIQSTSSSVVSAEPYVVKEAMLLAHGNVAAANLKGVSSDNR 122
Query: 126 ---FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + N G++I D A LG+S+GD+IN++ P +TP G+
Sbjct: 123 VLSQEFFTEDNQPINSVLFNATRTQPGIVIAADTAALLGVSLGDRINVIPPDFTLTPFGL 182
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ K + V+G+ R R D Y+SL++AQ + + VSGIEV V D + E
Sbjct: 183 IPKIKPFDVVGIARTRGGFLDTYYAYISLEQAQHFIGEVDKVSGIEVEVARFDDAQPLAE 242
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ LG + WQ+ + F + +
Sbjct: 243 ALRADLGYPYSIRSWQEMFGSFLAALK 269
>gi|187931356|ref|YP_001891340.1| ABC transporter, involved in lipoprotein release, permease
component [Francisella tularensis subsp. mediasiatica
FSC147]
gi|187712265|gb|ACD30562.1| ABC transporter, involved in lipoprotein release, permease
component [Francisella tularensis subsp. mediasiatica
FSC147]
Length = 420
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 70/273 (25%), Positives = 126/273 (46%), Gaps = 7/273 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY+ + ++N FISI S ISF+G+ +GV LI VMSVMNGF + + ++L
Sbjct: 1 MFKSLPLFIGLRYIRAKKRNRFISIISAISFLGISLGVAVLITVMSVMNGFDQQIKSKIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ + + Q + D+ +A ++ + + + + +SG S I
Sbjct: 61 MMVPPLKVYQLGGEVTDWPNLAKEVEKSTPSVTAVAPIVESQGLLSANSGSSTTAFVQIQ 120
Query: 123 NSDFSYLQNSFSRFYGNVSN-----DFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
+ Y V D ++G +++G LA NLG+ +GDK+ ++ P +
Sbjct: 121 GIEPKYQTKVLPIAEHIVDGKLSSLDDNQGYNIVLGSVLADNLGVKVGDKVTLIVPKISL 180
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
TP GM R K + V G+F YD +++++AQ F N+VS +++ VK+
Sbjct: 181 TPAGMIPRIKQFRVSGIF-SVSYQYDVYYAMINIKDAQKVFETGNSVSSLQLSVKNIYDA 239
Query: 238 EKTHENIVR-ILGNGVVVIDWQQRYQIFFSCYE 269
+ + + DW + FF +
Sbjct: 240 PLVKDKLNDGAIPPYYFTRDWTDENKSFFDALK 272
>gi|134302513|ref|YP_001122483.1| LolC/E family lipoprotein releasing system ABC transporter
transmembrane protein [Francisella tularensis subsp.
tularensis WY96-3418]
gi|134050290|gb|ABO47361.1| lipoprotein releasing system, ABC transporter, transmembrane
protein, LolC/E family [Francisella tularensis subsp.
tularensis WY96-3418]
Length = 420
Score = 143 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 70/273 (25%), Positives = 126/273 (46%), Gaps = 7/273 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY+ + ++N FISI S ISF+G+ +GV LI VMSVMNGF + + ++L
Sbjct: 1 MFKSLPLFIGLRYIRAKKRNRFISIISAISFLGISLGVAVLITVMSVMNGFDQQIKSKIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ + + Q + D+ +A ++ + + + + +SG S I
Sbjct: 61 MMVPPLKVYQLGGEVTDWPNLAKEVEKSTPSVTAVAPIVESQGLLSANSGSSTTAFVQIQ 120
Query: 123 NSDFSYLQNSFSRFYGNVSN-----DFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
+ Y V D ++G +++G LA NLG+ +GDK+ ++ P +
Sbjct: 121 GIEPKYQTKVLPIAEHIVDGKLSSLDDNQGYNIVLGSVLADNLGVKVGDKVTLIVPKISL 180
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
TP GM R K + V G+F YD +++++AQ F N+VS +++ VK+
Sbjct: 181 TPAGMIPRIKQFRVSGIF-SVSYQYDAYYAMINIKDAQKVFETGNSVSSLQLSVKNIYDA 239
Query: 238 EKTHENIVR-ILGNGVVVIDWQQRYQIFFSCYE 269
+ + + DW + FF +
Sbjct: 240 PLVKDKLNDGTIPPYYFTRDWTDENKSFFDALK 272
>gi|117617461|ref|YP_856536.1| lipoprotein-releasing system transmembrane protein LolC [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
gi|117558868|gb|ABK35816.1| lipoprotein-releasing system transmembrane protein LolC [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
Length = 411
Score = 143 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 61/271 (22%), Positives = 111/271 (40%), Gaps = 6/271 (2%)
Query: 1 MS--IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMI 58
M +F + + RY S R N F+S S S G+ IGV AL+VV+SVMNGF +
Sbjct: 1 MKTGLFQPLSLAIGLRYAGSRRSNRFVSFISLFSTFGIAIGVAALMVVISVMNGFEGQLK 60
Query: 59 KRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
R+LG+ HVV+ + L +P VI P + + + +
Sbjct: 61 GRILGVIPHVVVTSPAGRIDAAPQGLPDLARLPHVIAHAPMLDSEGMLQSPGQLTGVSVQ 120
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
G + + +++G+ +A L +S+GD++ ++ G
Sbjct: 121 GIDPAQWPKDDILHAQMQMGRLDSLQAGEYHIVLGQGVANRLKVSMGDQVRLILTEGTRF 180
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAI 237
+ ++ + D D+ + ++L +AQ L + V GI +++ DP A
Sbjct: 181 TPFGRVPAQRLFTVSGIFGVGADVDSQVALIALGDAQRMLRLPADQVGGIRLWLDDPFAA 240
Query: 238 EKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
++ + L +G+ DW++ F
Sbjct: 241 DQV---VKTALPDGLEWQDWRRERGELFQAV 268
>gi|58581928|ref|YP_200944.1| lipoprotein releasing system transmembrane protein [Xanthomonas
oryzae pv. oryzae KACC10331]
gi|188576498|ref|YP_001913427.1| lipoprotein releasing system transmembrane protein [Xanthomonas
oryzae pv. oryzae PXO99A]
gi|289665889|ref|ZP_06487470.1| lipoprotein releasing system transmembrane protein [Xanthomonas
campestris pv. vasculorum NCPPB702]
gi|58426522|gb|AAW75559.1| lipoprotein releasing system transmembrane protein [Xanthomonas
oryzae pv. oryzae KACC10331]
gi|188520950|gb|ACD58895.1| lipoprotein releasing system transmembrane protein [Xanthomonas
oryzae pv. oryzae PXO99A]
Length = 416
Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 65/268 (24%), Positives = 123/268 (45%), Gaps = 2/268 (0%)
Query: 2 SIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+F V + RYL + R+N FIS S S +G+ +GV LI ++VM+GF++++ R+
Sbjct: 3 RMFKPIPVAIGLRYLRAKRRNGFISFISMASILGIALGVTVLITTLAVMSGFQKEIRDRL 62
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
L + H + + P+ D+Q P V P++ ++ + G + V
Sbjct: 63 LQMAAHATVSAEGAPMRDWQHAVEVAMSDPRVAGAAPYIETESLLQGPRKQPAIVRGVIP 122
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ + + G+V + ++IGK+LA LG+ +GD + +L TP+G
Sbjct: 123 AEEGKVSVLAKKMQQ-GSVDSLTPGSYNIVIGKELALWLGVDVGDSVVVLLSDTQATPLG 181
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
R K +TV G+F + + D G+ +++Q+ + + V+G+ + + D D
Sbjct: 182 AMPRLKRFTVSGIFEAGYNEIDRGLAVVNMQDLARVLRM-DGVTGVRLRLHDMDQAWPVA 240
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ L V DW Q + +
Sbjct: 241 RDLAVKLHGPYRVSDWTQENANLYHSLK 268
>gi|256822602|ref|YP_003146565.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Kangiella koreensis DSM 16069]
gi|256796141|gb|ACV26797.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Kangiella koreensis DSM 16069]
Length = 414
Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 64/266 (24%), Positives = 122/266 (45%), Gaps = 1/266 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ F + V RY + R+N FIS S IS IG+ +GVM LI VMSVMNGF ++ R+L
Sbjct: 1 MRLPFSLFVGLRYTRAKRRNHFISFISLISMIGIALGVMVLITVMSVMNGFERELRDRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ HV++Q P+ D+Q + ++ P+VI P+V ++ G++ +
Sbjct: 61 GMAPHVLVQGLGTPIEDWQALEQKVKEHPEVIGASPYVQTESMFRFQGRERFGMVQGVLP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
N + G+ +I+G +AR+LG+++GDK+++L M
Sbjct: 121 NKIGEVSIVKDNMLTGSFDEIKPGEYNIILGASIARSLGLNLGDKVSLLILKETRVSMAG 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D + ++ + +A E V+ +++ + + +
Sbjct: 181 LSMRAKRFTVTGIFETRSEADKSLAFIHMDDAAQLLRQEG-VTALQLKTNNVMNVYDINY 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCY 268
+ +L + V DW ++++ F+
Sbjct: 240 QVSELLNHQYFVTDWTRQHETLFNAI 265
>gi|226943587|ref|YP_002798660.1| lipoprotein releasing system, hypothetical protein [Azotobacter
vinelandii DJ]
gi|226718514|gb|ACO77685.1| Lipoprotein releasing system, transmembrane protein [Azotobacter
vinelandii DJ]
Length = 416
Score = 143 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 73/268 (27%), Positives = 118/268 (44%), Gaps = 3/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RY + R+N F+S S S IG+ +GV+ +IVV+SVMNGF +M RVL
Sbjct: 1 MFRPLSVFIGLRYTGAKRRNHFVSFISLTSMIGLALGVLVMIVVLSVMNGFDHEMRTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I + P+ D++ +A + P V+ V PF Q ++ ++
Sbjct: 61 GMVPHATI-ESPVPIDDWRSLAAQARTHPQVVAVAPFTQVQGLLTHDGQVQKVLINAVDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G ++ G G++IG A LG+ IGD++ ++P VTP GM
Sbjct: 120 ALEPHVSIIGDFFRQGGLAALQPGGFGILIGDKAAAKLGVGIGDRVTFIAPEVAVTPAGM 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLY-FNLENAVSGIEVFVKDPDAIEKTH 241
R K +TV G+F + + D + L + V G+ + D +T
Sbjct: 180 FPRMKRFTVQGIFHVGAGELDGYVAMAHLDDIGRLQRWKSGQVQGLRLRFADLFQAPRTA 239
Query: 242 ENIVRIL-GNGVVVIDWQQRYQIFFSCY 268
I L G DW + + +
Sbjct: 240 WAIAERLKGGDFYARDWTRSHGNLYQAI 267
>gi|21242820|ref|NP_642402.1| lipoprotein releasing system transmembrane protein [Xanthomonas
axonopodis pv. citri str. 306]
gi|21108306|gb|AAM36938.1| lipoprotein releasing system transmembrane protein [Xanthomonas
axonopodis pv. citri str. 306]
Length = 413
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 65/267 (24%), Positives = 122/267 (45%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RYL + R+N FIS S S +G+ +GV LI ++VM+GF++++ R+L
Sbjct: 1 MFKPIPVAIGLRYLRAKRRNGFISFISMASILGIALGVTVLITTLAVMSGFQKEIRDRLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + + P+ D+Q V P++ ++ + G + V +
Sbjct: 61 QMAAHATVSAEGAPMRDWQHAVEVAMSDSRVAGAAPYIETESLLQGPRKQPAIVRGVIPA 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G+V + ++IGK+LA LG+ +GD I +L TP+G
Sbjct: 121 EEGKVSVLAKKMQQ-GSVDSLTPGSYNIVIGKELALWLGVDVGDSIVVLLSDTQATPLGA 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV G+F + + D G+ +++Q+ + + V+G+ + + D D
Sbjct: 180 MPRLKRFTVSGIFEAGYNEIDRGLAVVNMQDLARVLRM-DGVTGVRLRLHDMDQAWPVAR 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ L V DW Q + +
Sbjct: 239 DLAVRLHGPYRVSDWTQENANLYHSLK 265
>gi|325920382|ref|ZP_08182313.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Xanthomonas gardneri ATCC 19865]
gi|325549129|gb|EGD20052.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Xanthomonas gardneri ATCC 19865]
Length = 422
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 65/268 (24%), Positives = 122/268 (45%), Gaps = 2/268 (0%)
Query: 2 SIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+F V + RYL + R+N FIS S S +G+ +GV LI ++VM+GF++++ R+
Sbjct: 9 RMFKPIPVAIGLRYLRAKRRNGFISFISMASILGIALGVTVLITTLAVMSGFQKEIRDRL 68
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
L + H + P+ D+Q P + P++ ++ + G + V
Sbjct: 69 LQMAAHATVSADGAPMRDWQNAVEVATADPRIAGAAPYIETESLLQGPRKQPAIVRGIIP 128
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ + + G+V + ++IGK+LA LG+ +GD I +L TP+G
Sbjct: 129 AEEGKVSVLAKKMQQ-GSVDSLTPGSYNIVIGKELAIWLGVDVGDSIVVLLSDTQATPLG 187
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
R K +TV G+F + + D G+ +++Q+ + + V+G+ + + D D
Sbjct: 188 AMPRLKRFTVSGIFEAGYNEIDRGLAVVNMQDLARVLRM-DGVTGVRLRLHDMDQAWTVA 246
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ L V DW Q + +
Sbjct: 247 RDLAIKLHGPYRVSDWTQENANLYHSLK 274
>gi|114327947|ref|YP_745104.1| lipoprotein releasing system transmembrane protein lolE
[Granulibacter bethesdensis CGDNIH1]
gi|114316121|gb|ABI62181.1| lipoprotein releasing system transmembrane protein lolE
[Granulibacter bethesdensis CGDNIH1]
Length = 417
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 86/268 (32%), Positives = 140/268 (52%), Gaps = 2/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F+ FE VA RYL + + F+S+ + S IG+ +GV LIVV SVM+GFR+D++ R+L
Sbjct: 1 MFNAFERAVAARYLRARKGERFVSVIALFSLIGIALGVATLIVVSSVMSGFRQDIVNRML 60
Query: 63 GINGHVVIQQKYYPL-VDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
G+NGH I+ DYQ I +RL +P V +P + GQ +S + G +GVLVRG+
Sbjct: 61 GVNGHAEIEAYAGEQLHDYQAIVSRLKALPQVASAMPMIQGQVLLSTDAGGSTGVLVRGM 120
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
D + + +D + IG LA+ + GD + +L+ G T +G
Sbjct: 121 EPKDIAAMPAIGGHIVMGSLDDLKGDDAIAIGAGLAQRFRLRPGDPVTLLAKEGAATAIG 180
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ R +Y V+ +F YD+G+V++ L AQ++F + +GIE+ V PD ++
Sbjct: 181 VIPRVATYRVVAVFSAGLSQYDSGVVFLPLHAAQIFFQKPDGATGIEIRVHQPDQVDAIV 240
Query: 242 ENIVRIL-GNGVVVIDWQQRYQIFFSCY 268
++ + L G DW+ +
Sbjct: 241 PDLRQALNGQKAFARDWRHSNDLLLGVL 268
>gi|301057956|ref|ZP_07199013.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[delta proteobacterium NaphS2]
gi|300447923|gb|EFK11631.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[delta proteobacterium NaphS2]
Length = 407
Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 89/266 (33%), Positives = 144/266 (54%), Gaps = 3/266 (1%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
FE+ + RYL + RK FIS+ + IS IGVM+GVMAL+VV+SVMNGFR D++ ++LG+N
Sbjct: 2 FELFLGIRYLKAKRKQRFISVITIISVIGVMVGVMALVVVLSVMNGFRSDLMNKILGVNS 61
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
HV++ Y+ +A ++ I V+ V PF+ Q ++ VL +S
Sbjct: 62 HVLVLNLSGTFSGYKQVAEKVKKIEGVVAVTPFIYTQVMLNSSGRVSGAVLRGVDPDSAG 121
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVI---IGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ G++S+ G+ IG +LA+ +G + G + ++SP G +TP+G
Sbjct: 122 QVVNFDKMIKNGSLSSLNKTENGIPAIIIGSELAKQIGAATGSLVTVISPEGKLTPLGRT 181
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+K + V G+F +YD MVY+SL+EAQ + L V+G+E+ VK+ + +
Sbjct: 182 PNTKKFRVTGVFDSGMYEYDASMVYISLEEAQRFLALGENVTGLELKVKEVYQSDVVAKR 241
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
I + LG DW+ + FS +
Sbjct: 242 IQKELGYPYWTKDWKLMNRSLFSALK 267
>gi|167589766|ref|ZP_02382154.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia ubonensis Bu]
Length = 420
Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 60/271 (22%), Positives = 116/271 (42%), Gaps = 7/271 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRK------NAFISIASFISFIGVMIGVMALIVVMSVMNGFRED 56
+ +E + RY ++ N FIS + S G+ +GV ALI+V+SVMNGFR +
Sbjct: 1 MKLPYEWQIGLRYTRVGKRTIGTTGNGFISFIAVASMSGIALGVAALIIVLSVMNGFRSE 60
Query: 57 MIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
+ R+L + H+ I + D+ A V P+V QA ++
Sbjct: 61 VRDRMLAVLAHIEIFSPTGTMPDWTLTAGESLRNSSVTSAAPYVEAQALLTHGGKVTGVA 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
L + + G + G+++G LA L + GD++ +P G
Sbjct: 121 LRGIDPRLEQQVSDIAKDMKSGRLDALAPGELGIVLGTALASTLQVQAGDRLTFFAPGGG 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
+ + + + V+G F YD+ + ++ + +AQ F++ A +G+ + + D +
Sbjct: 181 AQMRNLLPQFRQFKVVGTFESGHYQYDSALAFIHIGDAQTLFHVA-APTGVRLRIDDMER 239
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSC 267
+ + R L + + DW ++ + +F
Sbjct: 240 APEIALQLARSLSGDLYIRDWTRQNRTWFVA 270
>gi|162148794|ref|YP_001603255.1| putative lipoprotein-releasing system transmembrane protein
[Gluconacetobacter diazotrophicus PAl 5]
gi|209545457|ref|YP_002277686.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Gluconacetobacter diazotrophicus PAl 5]
gi|161787371|emb|CAP56966.1| putative lipoprotein-releasing system transmembrane protein
[Gluconacetobacter diazotrophicus PAl 5]
gi|209533134|gb|ACI53071.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Gluconacetobacter diazotrophicus PAl 5]
Length = 415
Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 81/267 (30%), Positives = 141/267 (52%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F FE VA RYL + + F+S+ + S +G+ +GV LI+VMSVMNGF+ D++ R+L
Sbjct: 1 MFGPFERAVAGRYLRARKGERFVSVIAIFSLVGIALGVATLIIVMSVMNGFKADLMGRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+NG + + + +Y +A + +P V+ P + GQ ++ S +G +VRG++
Sbjct: 61 GLNGDLSLFGVTRTIQNYDDLAATVRQVPGVVTATPLIEGQVLLNSGSYN-AGGMVRGMT 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ L +DF +I+G LA G+S+G K+ ++SP G TP G
Sbjct: 120 RAGLHDLHEISDSLIAGSLDDFAGNDAIIVGVTLAERAGLSVGSKLTLISPNGAATPFGT 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R ++Y V+ +F DY++ V++ L AQ+YF + V+ ++V +D ++
Sbjct: 180 MPRIRAYRVVAIFDAGMHDYNSSYVFLPLPAAQIYFEMPAQVTQVQVTTRDATNVQPVRM 239
Query: 243 NIVRILGNG-VVVIDWQQRYQIFFSCY 268
I + + + + V+DW Q FF
Sbjct: 240 AIEQAVADPRIRVLDWTQSNNAFFGAV 266
>gi|71065341|ref|YP_264068.1| ABC lipoprotein exporter, inner membrane subunit, LolE
[Psychrobacter arcticus 273-4]
gi|71038326|gb|AAZ18634.1| ABC lipoprotein exporter, inner membrane subunit, LolE
[Psychrobacter arcticus 273-4]
Length = 411
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 65/267 (24%), Positives = 125/267 (46%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R N FIS S IS IG+ +GV LI V+SVMNGF ++ R+L
Sbjct: 1 MFRPLALFIGLRYTRAERSNGFISFISLISMIGLTLGVAVLITVLSVMNGFDRELKTRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ + + D++ +A+++ P+V+ V PF+ Q ++ ++
Sbjct: 61 GMVPQATVTSTE-IIGDWKQLADKIKEDPEVVAVAPFIQLQGMLTSNGQVAGIMVTGVDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + GN+ + G+++G+ + ++LG+ +GDK+ ++ P +P G+
Sbjct: 120 EYEKNVSIINEHMVEGNIDTLKNGEFGIVLGEGMVQSLGLQLGDKVTLVLPEASPSPAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +T+ G+F P+ D+ M ++ + +A L GI + + D +
Sbjct: 180 IPRFKRFTLTGIF-SISPEVDSLMAFIPMGDAAKLLRLPEGAQGIRMKLNDIFTAPMAAQ 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I + DW Q + F +
Sbjct: 239 KAAAIAPEQLYPSDWTQTHGNLFGAIQ 265
>gi|121610122|ref|YP_997929.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Verminephrobacter eiseniae EF01-2]
gi|121554762|gb|ABM58911.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Verminephrobacter eiseniae EF01-2]
Length = 420
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 71/267 (26%), Positives = 128/267 (47%), Gaps = 4/267 (1%)
Query: 6 RFEVIVAWRYLFSNR---KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+E+ + WRY + R +N FIS S +S +G+ +GV ALI+V+SVMNGF++D+ R+L
Sbjct: 7 PYELALGWRYTRAGRATRRNGFISFISGVSMLGIALGVAALIIVLSVMNGFQKDVRDRML 66
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H+ I + + + + G LVRGI
Sbjct: 67 SVVSHIEIFAPRGAALADPALTLAQARQNVNVIGAAPFVSAQALLARGEDMKGALVRGID 126
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + + + V++G LAR+LG+ +GD + +++P G +TP G+
Sbjct: 127 PALEGAVTDLAASNARLLGRLVPGQFRVVLGSVLARDLGVGVGDAVTLIAPAGQLTPAGV 186
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K TV GMF +YD+ +V + Q+AQ LE +G+ + ++D
Sbjct: 187 VPRLKQMTVAGMFDSGHYEYDSALVLLHHQDAQRILRLEGP-TGVRLKLRDLHRAHAVAG 245
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + L +++ DW Q+ + +F+ +
Sbjct: 246 ELAQTLSGALLIRDWTQQNRTWFAAVQ 272
>gi|258542705|ref|YP_003188138.1| lipoprotein releasing system transmembrane protein LolC/E
[Acetobacter pasteurianus IFO 3283-01]
gi|256633783|dbj|BAH99758.1| lipoprotein releasing system transmembrane protein LolC/E
[Acetobacter pasteurianus IFO 3283-01]
gi|256636842|dbj|BAI02811.1| lipoprotein releasing system transmembrane protein LolC/E
[Acetobacter pasteurianus IFO 3283-03]
gi|256639895|dbj|BAI05857.1| lipoprotein releasing system transmembrane protein LolC/E
[Acetobacter pasteurianus IFO 3283-07]
gi|256642951|dbj|BAI08906.1| lipoprotein releasing system transmembrane protein LolC/E
[Acetobacter pasteurianus IFO 3283-22]
gi|256646006|dbj|BAI11954.1| lipoprotein releasing system transmembrane protein LolC/E
[Acetobacter pasteurianus IFO 3283-26]
gi|256649059|dbj|BAI15000.1| lipoprotein releasing system transmembrane protein LolC/E
[Acetobacter pasteurianus IFO 3283-32]
gi|256652046|dbj|BAI17980.1| lipoprotein releasing system transmembrane protein LolC/E
[Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655103|dbj|BAI21030.1| lipoprotein releasing system transmembrane protein LolC/E
[Acetobacter pasteurianus IFO 3283-12]
Length = 415
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 80/268 (29%), Positives = 139/268 (51%), Gaps = 2/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F FE VA RYL + R F+S+ + S +G+ +GV LI+VM+VMNGF+ D++ R+L
Sbjct: 1 MFGPFERAVAGRYLRARRGERFVSVIAIFSLVGIALGVATLIIVMAVMNGFQADLMGRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+NG + I + + Y+ + ++ +P V+ P V GQ +S + SG +V G++
Sbjct: 61 GLNGDLTIYGQGRTISQYEDVTRKVRSVPGVVSATPLVEGQVLLSAGAYN-SGGMVHGLT 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
L+ S +DF +++G +A G+ IG + ++SP G T G
Sbjct: 120 PQGLKDLKAVSSSIIAGSLDDFGPDDSIVVGVTMAERAGLGIGSGLTLVSPDGAATAFGT 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + Y V+ +F DY++ +V++ + AQ+YF + N + I+V KD + +
Sbjct: 180 VPRVRRYRVVAIFDAGVNDYNSSVVFLPMHAAQIYFQMPNKATQIQVMTKDAEHVRPVTL 239
Query: 243 NIVRILGN-GVVVIDWQQRYQIFFSCYE 269
I +G+ G+ V+DW F +
Sbjct: 240 AIEDAVGDPGLRVLDWTNANNALFGAVQ 267
>gi|148653537|ref|YP_001280630.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Psychrobacter sp. PRwf-1]
gi|148572621|gb|ABQ94680.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Psychrobacter sp. PRwf-1]
Length = 411
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 59/267 (22%), Positives = 121/267 (45%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R N FIS+ S IS +G+ +GV LI V+SVMNGF ++ R+L
Sbjct: 1 MFRPLALFLGLRYTRAERSNRFISLISLISMVGLTLGVAVLITVLSVMNGFDRELKTRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ + + D++ +AN + P+V V PF+ Q ++ ++
Sbjct: 61 GMVPQATV-TSAEIIPDWKNLANEIKKDPEVHAVAPFIELQGMLTSNGQVAGIMVTGVEP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + G++ D +++G+ + LG+ +GDK+ ++ P +P G+
Sbjct: 120 EYEKNVSIINEHMVEGSIDTLKDGDFSIVLGESMVEALGLQVGDKVTLVLPEASPSPAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +T+ G+F + + + ++ + +A L GI + + + + +
Sbjct: 180 IPRFKRFTLTGVFNISREVDNL-VAFIPMGDAATLLRLPEGAQGIRMKLDNIFLAPQVAQ 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+I + DW + + F +
Sbjct: 239 RAAKINPQQLFPNDWTRTHGNLFGAIQ 265
>gi|118497101|ref|YP_898151.1| ABC transporter, involved in lipoprotein release, permease
component [Francisella tularensis subsp. novicida U112]
gi|194323398|ref|ZP_03057175.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Francisella tularensis subsp. novicida FTE]
gi|208778894|ref|ZP_03246240.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Francisella novicida FTG]
gi|118423007|gb|ABK89397.1| ABC transporter, involved in lipoprotein release, permease
component [Francisella novicida U112]
gi|194322253|gb|EDX19734.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Francisella tularensis subsp. novicida FTE]
gi|208744694|gb|EDZ90992.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Francisella novicida FTG]
Length = 420
Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats.
Identities = 70/273 (25%), Positives = 126/273 (46%), Gaps = 7/273 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY+ + ++N FISI S ISF+G+ +GV LI VMSVMNGF + + ++L
Sbjct: 1 MFKSLPLFIGLRYIRAKKRNRFISIISAISFLGISLGVAVLITVMSVMNGFDQQIKSKIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ + + Q + D+ +A ++ + + + + +SGGS I
Sbjct: 61 MMVPPLKVYQLGGEVTDWPNLAKEVEKSTPSVTAVAPIVESQGLLSANSGGSTTAFVQIQ 120
Query: 123 NSDFSYLQNSFSRFYGNVSN-----DFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
+ Y V D ++G +++G LA +LG+ +GDK+ ++ P +
Sbjct: 121 GIEPKYQTKVLPIAEHIVDGKLSSLDDNQGYNIVLGSVLADDLGVKVGDKVTLIVPKISL 180
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
TP GM R K + V G+F YD ++++ AQ F N+VS +++ VK+
Sbjct: 181 TPAGMIPRIKQFRVSGIF-SVSYQYDAYYAMINIKNAQKVFETGNSVSSLQLSVKNIYDA 239
Query: 238 EKTHENIVR-ILGNGVVVIDWQQRYQIFFSCYE 269
+ + + DW + FF +
Sbjct: 240 PIVKDKLNDGAIPPYYFTRDWTDENKSFFDALK 272
>gi|229589096|ref|YP_002871215.1| putative lipoprotein releasing system, membrane protein
[Pseudomonas fluorescens SBW25]
gi|229360962|emb|CAY47822.1| putative lipoprotein releasing system, membrane protein
[Pseudomonas fluorescens SBW25]
Length = 414
Score = 142 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 70/267 (26%), Positives = 119/267 (44%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+N F+S S S IG+ +GV+A+IVV+SVMNGF+ +M R+L
Sbjct: 1 MFRPLSIFIGTRYTRAKRRNRFVSFISMTSMIGLALGVLAMIVVLSVMNGFQREMSSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I P+ D+Q +A P+V +PF S + +
Sbjct: 61 GMVPHATI-VGVNPINDWQPVAAAAMKNPEVTAAVPFTQMDGMFSYKGAMQPIEISGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G + + GV++G+ AR +++GDK+ ++ P P G+
Sbjct: 120 AQEGKVSIVAQHIVRGKLDDLKPGEFGVVVGEITARRFRLNVGDKLTLIVPEISTAPGGI 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + V+G+F++ + + A++ N V + + VKD A K
Sbjct: 180 TPRMQRLNVVGIFKVGAELDGSMAMIHMADAAEIQHWQPNQVQSVRLAVKDLYAAPKVSA 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+I LG G DW FS +
Sbjct: 240 DIAASLGAGYKPDDWTHTQGSLFSAMK 266
>gi|328676565|gb|AEB27435.1| Lipoprotein releasing system transmembrane protein LolC
[Francisella cf. novicida Fx1]
Length = 420
Score = 142 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 69/273 (25%), Positives = 125/273 (45%), Gaps = 7/273 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY+ + ++N FISI S ISF+G+ +GV LI VMSVMNGF + + ++L
Sbjct: 1 MFKSLPLFIGLRYIRAKKRNRFISIISAISFLGISLGVAVLITVMSVMNGFDQQIKSKIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ + + Q + D+ +A ++ + + + + +S GS I
Sbjct: 61 MMVPPLKVYQLGGEVTDWPNLAKEVEKSTPSVTAVAPIVESQGLLSANSRGSTTAFVQIQ 120
Query: 123 NSDFSYLQNSFSRFYGNVSN-----DFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
+ Y V D ++G +++G LA +LG+ +GDK+ ++ P +
Sbjct: 121 GIEPKYQTKVLPIAEHIVDGKLSSLDDNQGYNIVLGSVLADDLGVKVGDKVTLIVPKISL 180
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
TP GM R K + V G+F YD ++++ AQ F N+VS +++ VK+
Sbjct: 181 TPAGMIPRIKQFRVSGIF-SVSYQYDAYYAMINIKNAQKVFETGNSVSSLQLSVKNIYDA 239
Query: 238 EKTHENIVR-ILGNGVVVIDWQQRYQIFFSCYE 269
+ + + DW + FF +
Sbjct: 240 PLVKDKLNDGAIPPYYFTRDWTDENKSFFDALK 272
>gi|326387644|ref|ZP_08209250.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Novosphingobium nitrogenifigens DSM 19370]
gi|326207690|gb|EGD58501.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Novosphingobium nitrogenifigens DSM 19370]
Length = 413
Score = 142 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 86/267 (32%), Positives = 131/267 (49%), Gaps = 4/267 (1%)
Query: 3 IF-SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+F S FE +A RY+ R AFI++ + IS + VM+GV AL++VMSVMNGFR D++ ++
Sbjct: 1 MFLSSFERTIARRYILPGRGEAFIALVAGISLVAVMLGVAALVIVMSVMNGFRADLMDKI 60
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+G+NGH VIQ L D+Q + +L+ P + + P + + + +
Sbjct: 61 VGLNGHAVIQAYGGRLDDWQGLVRQLEKTPGITRATPLIEQPLLATFNGRVEAIIARGNT 120
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ + G+ + V IG LA NLG+ +GD I +++P G TP G
Sbjct: 121 QADIARMAEK---KVAGSFKDIQPGASEVAIGSRLAENLGVQVGDTITVINPAGRTTPFG 177
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
R Y V +F + DYDN V M + +AQ + + IEV KDPD + +T
Sbjct: 178 TVPREIGYRVAAIFEVGVYDYDNAFVVMPIPDAQTLLLTGDTIGMIEVMTKDPDTVGQTL 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
I + L VV DW+ F
Sbjct: 238 APIKQALNGRAVVTDWKTLNASLFQAL 264
>gi|62261095|gb|AAX77959.1| unknown protein [synthetic construct]
Length = 469
Score = 142 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 70/273 (25%), Positives = 126/273 (46%), Gaps = 7/273 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY+ + ++N FISI S ISF+G+ +GV LI VMSVMNGF + + ++L
Sbjct: 41 MFKSLPLFIGLRYIRAKKRNRFISIISAISFLGISLGVAVLITVMSVMNGFDQQIKSKIL 100
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ + + Q + D+ +A ++ + + + + +SG S I
Sbjct: 101 MMVPPLKVYQLGGEVTDWPNLAKEVEKSTPSVTAVAPIVESQGLLSANSGSSTTAFVQIQ 160
Query: 123 NSDFSYLQNSFSRFYGNVSN-----DFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
+ Y V D ++G +++G LA NLG+ +GDK+ ++ P +
Sbjct: 161 GIEPKYQTKVLPIAEHIVDGKLSSLDDNQGYNIVLGSVLADNLGVKVGDKVTLIVPKISL 220
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
TP GM R K + V G+F YD +++++AQ F N+VS +++ VK+
Sbjct: 221 TPAGMIPRIKQFRVSGIF-SVSYQYDAYYAMINIKDAQKVFETGNSVSSLQLSVKNIYDA 279
Query: 238 EKTHENIVR-ILGNGVVVIDWQQRYQIFFSCYE 269
+ + + DW + FF +
Sbjct: 280 PLVKDKLNDGAIPPYYFTRDWTDENKSFFDALK 312
>gi|312959647|ref|ZP_07774164.1| lipoprotein releasing system, transmembrane protein [Pseudomonas
fluorescens WH6]
gi|311286364|gb|EFQ64928.1| lipoprotein releasing system, transmembrane protein [Pseudomonas
fluorescens WH6]
Length = 414
Score = 142 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 70/267 (26%), Positives = 116/267 (43%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+N F+S S S IG+ +GV+A+IVV+SVMNGF+ +M R+L
Sbjct: 1 MFRPLSIFIGTRYTRAKRRNRFVSFISMTSMIGLALGVLAMIVVLSVMNGFQREMSSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I P+ D+Q +A P V +PF S + +
Sbjct: 61 GMVPHATI-VGVNPIDDWQPVAAAAMKNPQVTAAVPFTQMDGMFSYKGAMQPIEISGVDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G + + GV+IG AR +++GDK+ ++ P P G+
Sbjct: 120 AQEGKVSIVAQHIVRGKLEDLKPGEFGVVIGDITARRFRLNVGDKVTLIVPEISSAPGGI 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + V+G+F++ + + A++ N V + + VKD A
Sbjct: 180 TPRMQRLNVVGIFKVGAELDGSMALIHMADAAEIQHWQPNQVQSVRLAVKDLYAAPSVSA 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+I LG G DW FS +
Sbjct: 240 DIAGSLGAGYKPDDWTHTQGSLFSAMK 266
>gi|89255884|ref|YP_513246.1| lipoprotein releasing system, subunit C,putative membrane protein
[Francisella tularensis subsp. holarctica LVS]
gi|156501867|ref|YP_001427932.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Francisella tularensis subsp. holarctica FTNF002-00]
gi|254367245|ref|ZP_04983273.1| lipoprotein releasing system, subunit C, putative membrane protein
[Francisella tularensis subsp. holarctica 257]
gi|254368722|ref|ZP_04984735.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
gi|254874371|ref|ZP_05247081.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|89143715|emb|CAJ78914.1| lipoprotein releasing system, subunit C,putative membrane protein
[Francisella tularensis subsp. holarctica LVS]
gi|134253063|gb|EBA52157.1| lipoprotein releasing system, subunit C, putative membrane protein
[Francisella tularensis subsp. holarctica 257]
gi|156252470|gb|ABU60976.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Francisella tularensis subsp. holarctica FTNF002-00]
gi|157121643|gb|EDO65813.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
gi|254840370|gb|EET18806.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis MA00-2987]
Length = 434
Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats.
Identities = 70/273 (25%), Positives = 126/273 (46%), Gaps = 7/273 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY+ + ++N FISI S ISF+G+ +GV LI VMSVMNGF + + ++L
Sbjct: 15 MFKSLPLFIGLRYIRAKKRNRFISIISAISFLGISLGVAVLITVMSVMNGFDQQIKSKIL 74
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ + + Q + D+ +A ++ + + + + +SG S I
Sbjct: 75 MMVPPLKVYQLGGEVTDWPNLAKEVEKSTPSVTAVAPIVESQGLLSANSGSSTTAFVQIQ 134
Query: 123 NSDFSYLQNSFSRFYGNVSN-----DFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
+ Y V D ++G +++G LA NLG+ +GDK+ ++ P +
Sbjct: 135 GIEPKYQTKVLPIAEHIVDGKLSSLDDNQGYNIVLGSVLADNLGVKVGDKVTLIVPKISL 194
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
TP GM R K + V G+F YD +++++AQ F N+VS +++ VK+
Sbjct: 195 TPAGMIPRIKQFRVSGIF-SVSYQYDAYYAMINIKDAQKVFETGNSVSSLQLSVKNIYDA 253
Query: 238 EKTHENIVR-ILGNGVVVIDWQQRYQIFFSCYE 269
+ + + DW + FF +
Sbjct: 254 PLVKDKLNDGAIPPYYFTRDWTDENKSFFDALK 286
>gi|93005617|ref|YP_580054.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Psychrobacter cryohalolentis K5]
gi|92393295|gb|ABE74570.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Psychrobacter cryohalolentis K5]
Length = 411
Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats.
Identities = 65/267 (24%), Positives = 125/267 (46%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R N FIS S IS IG+ +GV LI V+SVMNGF ++ R+L
Sbjct: 1 MFRPLALFIGLRYTRAERSNGFISFISLISMIGLTLGVAVLITVLSVMNGFDRELKTRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ + + D++ +A+++ P+V+ V PF+ Q ++ ++
Sbjct: 61 GMVPQATVTSTE-IIGDWKQVADKIKEDPEVVAVAPFIQLQGMLTSNGQVAGIMVTGVDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + GN+ + G+++G+ + ++LG+ +GDK+ ++ P +P G+
Sbjct: 120 EYEKNVSIINEHMVEGNIDTLKNGEFGIVLGEGMVQSLGLQLGDKVTLVLPEASPSPAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +T+ G+F P+ D+ M ++ + +A L GI + + D +
Sbjct: 180 IPRFKRFTLTGIF-SISPEVDSLMAFIPMGDAAKLLRLPEGAQGIRMKLHDIFTAPMAAQ 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I + DW Q + F +
Sbjct: 239 KAAAIAPEQLYPSDWTQTHGNLFGAIQ 265
>gi|317051231|ref|YP_004112347.1| hypothetical protein Selin_1056 [Desulfurispirillum indicum S5]
gi|316946315|gb|ADU65791.1| protein of unknown function DUF214 [Desulfurispirillum indicum S5]
Length = 401
Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats.
Identities = 61/264 (23%), Positives = 108/264 (40%), Gaps = 5/264 (1%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+E+ +AWR L ++ FIS IS +G+ IGV ALI+V+ VM GF ++ ++LG
Sbjct: 2 YELTIAWRNLRGKKREKFISFIGLISVLGIAIGVAALIIVLGVMKGFETELRSKILGATS 61
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
H+V+ + +Y + R+ I V + + G + V S
Sbjct: 62 HIVVSSYDGVMTEYPDLERRIRAIDGVESASGVLHASLMLMGQRNVSGVVARGIDPESHA 121
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ + +IIG+ LA + +G + L+P G + P G +
Sbjct: 122 HIAS----YIVEGSLQNLHQPDSIIIGRQLASKYHLDVGSVVTFLAPSGRIGPFGSVPKR 177
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN-AVSGIEVFVKDPDAIEKTHENIV 245
K V G+ + +YD + + S++ + +V+ IEV +++ E I
Sbjct: 178 KQMRVAGILQTGMYEYDTSLAFASIETVSDIAGHRDLSVNTIEVRIRNIFNTEDAMAAIR 237
Query: 246 RILGNGVVVIDWQQRYQIFFSCYE 269
+G DW FS +
Sbjct: 238 EEIGPMYFTRDWTTMNANLFSALK 261
>gi|153206738|ref|ZP_01945579.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Coxiella burnetii 'MSU Goat Q177']
gi|165918572|ref|ZP_02218658.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Coxiella burnetii RSA 334]
gi|212218438|ref|YP_002305225.1| lipoprotein releasing system transmembrane protein [Coxiella
burnetii CbuK_Q154]
gi|120577101|gb|EAX33725.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Coxiella burnetii 'MSU Goat Q177']
gi|165917700|gb|EDR36304.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Coxiella burnetii RSA 334]
gi|212012700|gb|ACJ20080.1| lipoprotein releasing system transmembrane protein [Coxiella
burnetii CbuK_Q154]
Length = 414
Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats.
Identities = 64/267 (23%), Positives = 127/267 (47%), Gaps = 3/267 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + V RY R+N FIS S +S +G+ +GV LI V+SVMNGF ++
Sbjct: 1 MIRPLALYVGLRYTRVKRRNHFISFISLVSMLGIALGVAVLITVLSVMNGFDYEIRTHFF 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ V + + + + P+V+ PFV+G +S ++ +
Sbjct: 61 ALAPQVTVMTGQNIEKTWPELQKTIASNPEVVASAPFVTGMGLLSNEGIVSGATVLGVVP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + Q G +S+ +I+G+ LA LG+SIGDK+++ +P TP+G+
Sbjct: 121 SQEKKVSQLDGKLVGGKLSSLNPGSYNIILGRKLADQLGLSIGDKVSLFTPQTTTTPLGI 180
Query: 183 GIRSKSYTVLGMFRMRF-PDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ + +T+ G+F + +D G+ Y+++Q+ F+ SG+ + +K+ +
Sbjct: 181 FPQFRRFTISGIFSTKSGFGFDAGIAYINMQDGFRLFSQ--GASGLHIKIKNLYQAQSVT 238
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + ++L +V +W +++ FF
Sbjct: 239 QQLQKLLPGEFIVTNWTEQFGSFFKAI 265
>gi|328675642|gb|AEB28317.1| Lipoprotein releasing system transmembrane protein LolC
[Francisella cf. novicida 3523]
Length = 420
Score = 141 bits (355), Expect = 8e-32, Method: Composition-based stats.
Identities = 71/273 (26%), Positives = 126/273 (46%), Gaps = 7/273 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY+ + ++N FISI S ISF+G+ +GV LI VMSVMNGF + + ++L
Sbjct: 1 MFKSLPLFIGLRYIRAKKRNRFISIISAISFLGISLGVAVLITVMSVMNGFDQQIKSKIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ + + Q + D+ +A ++ + + + + +SGGS I
Sbjct: 61 MMVPPLKVYQLGGEVTDWPTLAKEVEKSTSSVTAVAPIVESQGLLSANSGGSTTAFVQIQ 120
Query: 123 NSDFSYLQNSFSRFYGNVSN-----DFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
+ Y V D ++G +++G LA NLG+ +GDK+ ++ P +
Sbjct: 121 GIEPKYQTKVLPIAEHIVDGKLSSLDDNQGYNIVLGSVLADNLGVKVGDKVTLIVPKISL 180
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
TP GM R K + V G+F YD ++++ AQ F N+VS +++ VK+
Sbjct: 181 TPAGMIPRIKQFRVSGIF-SVSYQYDAYYAMINIKNAQKVFETGNSVSSLQLSVKNIYDA 239
Query: 238 EKTHENIVR-ILGNGVVVIDWQQRYQIFFSCYE 269
+ + + DW + FF +
Sbjct: 240 PLVKDKLNDGAIPPYYFTRDWTDENKSFFDALK 272
>gi|226943589|ref|YP_002798662.1| lipoprotein releasing system, hypothetical protein [Azotobacter
vinelandii DJ]
gi|226718516|gb|ACO77687.1| Lipoprotein releasing system, transmembrane protein [Azotobacter
vinelandii DJ]
Length = 414
Score = 141 bits (355), Expect = 8e-32, Method: Composition-based stats.
Identities = 67/267 (25%), Positives = 115/267 (43%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RY + R+N +IS S S +G+ +GV+A+IVV+SVMNGF+++M R+L
Sbjct: 1 MFRPLAVYIGARYTRAKRRNHYISFISLTSMLGLALGVLAMIVVLSVMNGFQKEMSSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H PL D++ +A P V V P +S + +
Sbjct: 61 GMVPHA-AIVGAQPLDDWRSLAGTALANPQVRAVAPLTELDGMLSYKGTMQPIQVQGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G +++ G IIG+ AR + +GDK+ ++ P + +
Sbjct: 120 FEEPKVSIIADHLQQGRLTDLAPGEFGTIIGEITARRFALQVGDKLTLIVPELNGASGSV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + +V+G+F++ + + A L V G+ + +KD K
Sbjct: 180 TPRMQRLSVVGIFKIGAELDGSLALIHVADAAHLMRWQPGQVQGVRLALKDLYQAPKVAG 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I LG +DW Q FS +
Sbjct: 240 GIAGELGAAYRAVDWTQTQGSLFSAMQ 266
>gi|118595159|ref|ZP_01552506.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Methylophilales bacterium HTCC2181]
gi|118440937|gb|EAV47564.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Methylophilales bacterium HTCC2181]
Length = 423
Score = 141 bits (355), Expect = 8e-32, Method: Composition-based stats.
Identities = 90/265 (33%), Positives = 143/265 (53%), Gaps = 3/265 (1%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+E+ +A RY KN FIS S S IG+ +GVMALIVV+SVMNGF+ ++ R+L +
Sbjct: 12 YELWIASRYTRLRNKNNFISFISLTSIIGIALGVMALIVVLSVMNGFQSELRARILNVAS 71
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
V + L D+Q ++ + ++ PF S QA VS GVLVRG+ +
Sbjct: 72 DVEVISAASNLGDWQETERKISSLNNIESTAPFTSSQALVSIGKYN-RGVLVRGVDPENE 130
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
S + N + ++IG DLAR + +GDKI+++S + +P+GM R
Sbjct: 131 STVSNLEQQLTAGDFKVTPGKFEILIGIDLARYFSLDLGDKISMISSQANFSPVGMLPRI 190
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
K +TV G+F +YD G+V + +++AQ +F + + +SGI V +KD D ++ I
Sbjct: 191 KQFTVAGIFDAGMYEYDAGLVLIHMKDAQKFFQMGSEISGIRVKLKDLDKTSESSAAINN 250
Query: 247 IL--GNGVVVIDWQQRYQIFFSCYE 269
+ GN V+DW +++ FS +
Sbjct: 251 AINAGNKFYVLDWTKKHTNLFSAIQ 275
>gi|303257510|ref|ZP_07343522.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderiales bacterium 1_1_47]
gi|302859480|gb|EFL82559.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderiales bacterium 1_1_47]
Length = 424
Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 69/268 (25%), Positives = 127/268 (47%), Gaps = 5/268 (1%)
Query: 6 RFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
FE ++ RY S RK + F+S S +S + +GVMALI+V+SVMNGF++++ ++L
Sbjct: 10 PFEWMIGLRYTLSRRKGRSDGFVSFISAMSMASIALGVMALIIVLSVMNGFQKEVRDKML 69
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + P+ D+Q A L I + + GV + GI
Sbjct: 70 SVLSHAEVLSIGAPIPDWQKTAAELKKQQPEIIGAAPFLRGQGLLTSGTNVRGVQLNGID 129
Query: 123 NSDFSYLQNSFSRFYGNVSND-FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
S + + +D +I+G DLAR LG+ G+K+N++ P G TP G
Sbjct: 130 PETESQVSDVAKNMKIGRLSDLKPGEFKIILGTDLARMLGVIPGEKVNVMVPQGQFTPAG 189
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
R + +TV G+F ++D+ M +++L +A+ + GI + + + +
Sbjct: 190 TMPRMRQFTVAGVFNSGHYEFDSAMSFINLTDAEKLMRTQTP-GGIRLKLSNMQDAPRVA 248
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + G++ DW ++ + +F+ +
Sbjct: 249 AELNNQMPPGLLATDWSRQNRTWFAAVQ 276
>gi|298368788|ref|ZP_06980106.1| lipoprotein-releasing system transmembrane protein LolC [Neisseria
sp. oral taxon 014 str. F0314]
gi|298282791|gb|EFI24278.1| lipoprotein-releasing system transmembrane protein LolC [Neisseria
sp. oral taxon 014 str. F0314]
Length = 416
Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 67/268 (25%), Positives = 133/268 (49%), Gaps = 2/268 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ E + RYL + ++N F+S + +S G+ +GVMALIVV+SVMNGF++++ ++L
Sbjct: 1 MASLETWIGLRYLRAKKRNGFMSFITMVSIAGIALGVMALIVVLSVMNGFQKEIRGQLLN 60
Query: 64 INGH-VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + ++Q + + +V+ P+VS QA ++ + +
Sbjct: 61 VAPHAEIGYYDNGGGENWQNLRQFVKGKKEVLASAPYVSDQALLANAGEVRGVQIRGILP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + + + G+ ++ G +I+G+ LA LG G K+ +++P G+VTP G+
Sbjct: 121 DEEKNVVDYGDNMPSGSFNDLKPGGFDIILGEGLAEALGTEKGGKVTVITPEGNVTPAGV 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K + V+G+ + + DN + +++AQ+ + L V G+ + + P
Sbjct: 181 VPRLKQFNVVGIVKTGVYEVDNSLALTHIKDAQVLYRLGENVGGLRLKLAHPQNAPDFIA 240
Query: 243 NIVRI-LGNGVVVIDWQQRYQIFFSCYE 269
N++ + V V DW + +F E
Sbjct: 241 NLIPAGQQDKVWVRDWTFNNRSYFEAVE 268
>gi|254372466|ref|ZP_04987955.1| conserved hypothetical protein [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570193|gb|EDN35847.1| conserved hypothetical protein [Francisella novicida GA99-3549]
Length = 434
Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 70/273 (25%), Positives = 125/273 (45%), Gaps = 7/273 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY+ + ++N FISI S ISF+G+ +GV LI VMSVMNGF + + ++L
Sbjct: 15 MFKSLPLFIGLRYIRAKKRNRFISIISAISFLGISLGVAVLITVMSVMNGFDQQIKSKIL 74
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ + + Q + D+ +A ++ + + + +SGGS I
Sbjct: 75 MMVPPLKVYQLGGEVTDWPNLAKEVEKSTPSVTAAAPIVESQGLLSANSGGSTTAFVQIQ 134
Query: 123 NSDFSYLQNSFSRFYGNVSN-----DFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
+ Y V D ++G +++G LA +LG+ +GDK+ ++ P +
Sbjct: 135 GIEPKYQTKVLPIAEHIVDGKLSSLDDNQGYNIVLGSVLADDLGVKVGDKVTLIVPKISL 194
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
TP GM R K + V G+F YD ++++ AQ F N+VS +++ VK+
Sbjct: 195 TPAGMIPRIKQFRVSGIF-SVSYQYDAYYAMINIKNAQKVFETGNSVSSLQLSVKNIYDA 253
Query: 238 EKTHENIVR-ILGNGVVVIDWQQRYQIFFSCYE 269
+ + + DW + FF +
Sbjct: 254 PIVKDKLNDGAIPPYYFTRDWTDENKSFFDALK 286
>gi|77460078|ref|YP_349585.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas fluorescens Pf0-1]
gi|77384081|gb|ABA75594.1| putative lipoprotein releasing system, membrane protein
[Pseudomonas fluorescens Pf0-1]
Length = 414
Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 70/267 (26%), Positives = 117/267 (43%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+N F+S S S IG+ +GV+A+IVV+SVMNGF+ +M R+L
Sbjct: 1 MFRPLSIFIGTRYTRAKRRNRFVSFISMTSMIGLALGVLAMIVVLSVMNGFQREMSSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I P+ D+Q +A P+V +PF + +S +
Sbjct: 61 GMVPHATIVGVK-PIDDWQPVAAAAMKNPEVTAAVPFTEMEGMLSYKGMMQPIQISGVDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G + GV++G+ AR +++GDKI ++ P P G+
Sbjct: 120 AQEGKVSIVAQHIVQGRLDALKPGEFGVVLGEITARRFRLNVGDKITLIVPEVSTAPGGI 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + V+G+F++ + + A + N V + + VKD A K
Sbjct: 180 TPRMQRLNVVGVFKVGAELDGSMGLIHVSDAATMQHWEPNQVQSVRLAVKDLYAAPKVSS 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+I LG DW FS +
Sbjct: 240 DIASGLGADFKADDWTHTQGSLFSAMK 266
>gi|254497932|ref|ZP_05110696.1| lipoprotein ABC transporter [Legionella drancourtii LLAP12]
gi|254352826|gb|EET11597.1| lipoprotein ABC transporter [Legionella drancourtii LLAP12]
Length = 414
Score = 141 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 75/268 (27%), Positives = 136/268 (50%), Gaps = 3/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY S +KN F+S S S +G+ +GVM LI V+SVMNGF + + R
Sbjct: 1 MYKPLALFMGLRYTRSRKKNHFVSFISLSSMLGIGLGVMVLITVLSVMNGFDQQIHNRFF 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ + + + D+ +A ++ IP++ + P+V GQ + +L +
Sbjct: 61 GMAPEITVSGPGERINDWPEVAKKIQTIPEIKALAPYVGGQGLLVHEGQVLPIILTGVMP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + GN D + G+I+GK LA +LG+ IGDK+ ++ P VTP GM
Sbjct: 121 DKEENITHLKDKLLAGN--IDNLKHFGMILGKGLADSLGVMIGDKVTVMIPQATVTPAGM 178
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMV-YMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
R K +TV+G+F + + ++++++AQ L N VSGI++ + + +
Sbjct: 179 VPRFKRFTVVGVFSAGTGFNFDTKIAFINIEDAQKLLQLGNDVSGIKMKINEVYQAPELS 238
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + +LG V +W Q++ FF +
Sbjct: 239 DRLSHLLGEQYQVGNWTQQFGSFFEAVK 266
>gi|89075821|ref|ZP_01162205.1| putative ABC transporter integral membrane subunit [Photobacterium
sp. SKA34]
gi|89048442|gb|EAR54018.1| putative ABC transporter integral membrane subunit [Photobacterium
sp. SKA34]
Length = 402
Score = 141 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 64/268 (23%), Positives = 114/268 (42%), Gaps = 7/268 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RYL + F S++S G+ IGVMALI VMSVMNGF + + R+L
Sbjct: 1 MFHPVSFFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMALITVMSVMNGFEDQLKGRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ V+ + + L +P V V G+A + +S +G ++
Sbjct: 61 GVLPQAVVSSADGRVPLSEDAPEALKQLPHVTDVTAITRGEAIIQSANSIAAGKMIGIEP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
N S G +S+ V+IG+ LA LG+ +G+KI ++
Sbjct: 121 NQYD---PISRHMMVGRLSDLTPGSFKVVIGQTLAVELGVQLGEKIRLMVTSASQFTPIG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ + D D +VY ++ +A + + ++G +++ DP + +
Sbjct: 178 RMPSQRKFEVSGIYDTGSDIDKQLVYTNISDAGRLLRYKQDQMTGWRLYLDDPFVVPELA 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L NG DW+++ F +
Sbjct: 238 KL---KLPNGWTWSDWREQRGELFQAVK 262
>gi|291286026|ref|YP_003502842.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Denitrovibrio acetiphilus DSM 12809]
gi|290883186|gb|ADD66886.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Denitrovibrio acetiphilus DSM 12809]
Length = 410
Score = 141 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 73/270 (27%), Positives = 127/270 (47%), Gaps = 5/270 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+FE VA RYL S + N +S S IS +G+++GV LIVV+SVM+GF +++ R+LG
Sbjct: 1 MKFERFVAGRYLRSRKSNKILSFISGISILGILLGVATLIVVVSVMSGFSDNLKNRILGA 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N H+V+ + + ++ D + + + + SGV+VRG+
Sbjct: 61 NAHIVVNRVDVSPIKNWQGIGKIIEDVDGVTGVSPFILNQVLLTSENNVSGVVVRGVVPE 120
Query: 125 DFSYLQNSFSRFYGNVSND-----FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + ND + + +GK+LA NLG+ GD++ ++SP+G P
Sbjct: 121 RELKVTSIKKFMTDGYFNDISKKAENGNPQIAVGKELAANLGVLPGDEVVMVSPFGKKGP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
G+ + K + V G+F +Y+N + Y+ + +AQ +F + SG + + D
Sbjct: 181 FGITPKMKRFEVSGIFDTGMYEYNNSLAYIDISDAQEFFGTGDIASGFSISTGNFDKAPA 240
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
I + L DW + FS +
Sbjct: 241 IAAQIQKELDFPFWSRDWISMNKNLFSALK 270
>gi|94499582|ref|ZP_01306119.1| ABC-type transport system, involved in lipoprotein release,
permease component [Oceanobacter sp. RED65]
gi|94428336|gb|EAT13309.1| ABC-type transport system, involved in lipoprotein release,
permease component [Oceanobacter sp. RED65]
Length = 414
Score = 141 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 67/267 (25%), Positives = 123/267 (46%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + RY + R+N FIS S IS G+ +GV LI+V+SVMNGF ++ +R+L
Sbjct: 1 MLKNLPIAIGLRYTRAKRRNHFISFISAISMAGLTLGVAVLILVLSVMNGFDRELRQRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H + + + ++Q +A ++ DV+ PF+ Q +S ++
Sbjct: 61 GMVPHAAVMGEKQGISNWQDVAAQIADRDDVLATAPFIQIQGMMSYRGRVSGVMVTGIEP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G+ + GV++G+ LAR LG+++GDK+ ++ P +TP G+
Sbjct: 121 EWEERVSILPDFIEQGDFYSLQPGDYGVVMGELLARKLGVTLGDKVTLIMPEASLTPAGL 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K + V G+F + + D Y+++Q+A + GI + D K
Sbjct: 181 MPRLKRFEVTGVFAVG-AEVDANFAYINMQDAARLTRT-DGAQGIRLLTDDLFKAPKIVW 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ L DW + + F +
Sbjct: 239 DLRMDLDGIYGASDWTRTHGNLFQAIK 265
>gi|261365091|ref|ZP_05977974.1| lipoprotein releasing system, permease protein [Neisseria mucosa
ATCC 25996]
gi|288566517|gb|EFC88077.1| lipoprotein releasing system, permease protein [Neisseria mucosa
ATCC 25996]
Length = 416
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 65/268 (24%), Positives = 120/268 (44%), Gaps = 2/268 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
E + RYL + ++N F+S + IS IG+ +GV ALI V+SVMNGF++++ ++L
Sbjct: 1 MVSLETWIGLRYLRAKKRNGFMSFITMISIIGIALGVTALITVLSVMNGFQKEIRGQLLN 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ H I + + + + GV +RGI
Sbjct: 61 VAPHAEIGYYDNGNGLGWQNLREIVKDKKEVLASAPYISDQALLANAGEVRGVQIRGILP 120
Query: 124 SDFSYLQNSFSRFYGNVSN-DFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S+ + + + +I+G+ LA+ LG +G K+ +++P G+VTP G+
Sbjct: 121 SEEKNVVDYGKDMPAGSFDSLKPGNFDIILGEGLAQALGAEVGGKVTVITPEGNVTPAGV 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K + V+G+ + + DN + +Q+AQ+ + L G+ + + DP
Sbjct: 181 VPRLKQFNVVGLVKTGVYEVDNSLAMTHIQDAQVLYRLGENFGGLRLKLADPQNAPSFTA 240
Query: 243 NIVR-ILGNGVVVIDWQQRYQIFFSCYE 269
N++ + + V DW + +F E
Sbjct: 241 NLISPSKKDSIWVRDWTFNNRSYFEAVE 268
>gi|254373928|ref|ZP_04989410.1| conserved hypothetical protein [Francisella novicida GA99-3548]
gi|151571648|gb|EDN37302.1| conserved hypothetical protein [Francisella novicida GA99-3548]
Length = 434
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 70/273 (25%), Positives = 126/273 (46%), Gaps = 7/273 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY+ + ++N FISI S ISF+G+ +GV LI VMSVMNGF + + ++L
Sbjct: 15 MFKSLPLFIGLRYIRAKKRNRFISIISAISFLGISLGVAVLITVMSVMNGFDQQIKSKIL 74
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ + + Q + D+ +A ++ + + + + +SGGS I
Sbjct: 75 MMVPPLKVYQLGGEVTDWPNLAKEVEKSTPSVTAVAPIVESQGLLSANSGGSTTAFVQIQ 134
Query: 123 NSDFSYLQNSFSRFYGNVSN-----DFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
+ Y V D ++G +++G LA +LG+ +GDK+ ++ P +
Sbjct: 135 GIEPKYQTKVLPIAEHIVDGKLSSLDDNQGYNIVLGSVLADDLGVKVGDKVTLIVPKISL 194
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
TP GM R K + V G+F YD ++++ AQ F N+VS +++ VK+
Sbjct: 195 TPAGMIPRIKQFRVSGIF-SVSYQYDAYYAMINIKNAQKVFETGNSVSSLQLSVKNIYDA 253
Query: 238 EKTHENIVR-ILGNGVVVIDWQQRYQIFFSCYE 269
+ + + DW + FF +
Sbjct: 254 PIVKDKLNDGAIPPYYFTRDWTDENKSFFDALK 286
>gi|330829924|ref|YP_004392876.1| lipoprotein releasing system transmembrane protein LolE [Aeromonas
veronii B565]
gi|328805060|gb|AEB50259.1| Lipoprotein releasing system transmembrane protein LolE [Aeromonas
veronii B565]
Length = 411
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 64/271 (23%), Positives = 112/271 (41%), Gaps = 6/271 (2%)
Query: 1 MS--IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMI 58
M +F + + RY S R N F+S S S G+ IGV AL+VV+SVMNGF +
Sbjct: 1 MKTGLFQPLSLAIGLRYAGSKRSNRFVSFISLFSTFGIAIGVAALMVVISVMNGFEGQLK 60
Query: 59 KRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
R+LG+ HVV+ + + L +P V+ P + + + +
Sbjct: 61 GRILGVIPHVVVTNQAGRIDADPQGLPDLAKLPHVVASAPMLDSEGMLQSPGQLTGVSVQ 120
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
G + +++G+ +AR L +SIGD++ ++ G
Sbjct: 121 GIDPAKWPKDDILHSQMLGGRLDTLQAGHYRIVLGQGVARRLNVSIGDQVRLILTEGTRF 180
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAI 237
+ ++ + D DN + ++L +AQ L V GI +++ DP A
Sbjct: 181 TPFGRVPAQRLFTVSGIFGVGADVDNQIALIALGDAQRLLRLPPETVGGIRLWLDDPFAA 240
Query: 238 EKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
++ I L +G++ DW++ F
Sbjct: 241 DEV---IKTPLPDGLLWQDWRRERGELFQAV 268
>gi|85374229|ref|YP_458291.1| ABC-type transport system [Erythrobacter litoralis HTCC2594]
gi|84787312|gb|ABC63494.1| ABC-type transport system [Erythrobacter litoralis HTCC2594]
Length = 415
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 81/267 (30%), Positives = 127/267 (47%), Gaps = 3/267 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ S FE +A RYL R AFI++ + IS VM+ V L++VMSVMNGFR +++ +++
Sbjct: 4 LLSPFEWTIAKRYLLPGRGEAFIALVAGISVGVVMLSVAMLVIVMSVMNGFRAELLDKIV 63
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+NGH ++Q L +++ I + P V + P + Q + + V VRG +
Sbjct: 64 GVNGHAIVQAYGGRLDNWESILEEVRDTPGVTEASPLI-EQPLLVTFNGRVEAVFVRGNT 122
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
D + L + GN+ V IG LA N+G +GD + I++P G TP G
Sbjct: 123 QEDIAELSDKVVL--GNLQRLQPEASVVAIGARLAENIGARVGDVVTIINPAGRSTPFGT 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R Y V +F + DYD + M + +AQ + + IEV +D D + +
Sbjct: 181 VPRQVGYEVAAIFEVGLYDYDQAFMVMPIPDAQTLLLTGDTIGMIEVKTEDADNVAEIMA 240
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L V WQQ F +
Sbjct: 241 PVEAKLSGIAQVRTWQQINSSIFEALQ 267
>gi|167623546|ref|YP_001673840.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Shewanella halifaxensis HAW-EB4]
gi|167353568|gb|ABZ76181.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella halifaxensis HAW-EB4]
Length = 407
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 62/268 (23%), Positives = 114/268 (42%), Gaps = 2/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +RY + + NAF S + + G+++GV ALIVV SVMNG + +R+L
Sbjct: 1 MNFSLSFYIGYRYWRARKSNAFASFITIFAVSGILLGVAALIVVSSVMNGLEGQLKQRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G + + + +VD+ +L+ +P +I P ++ QA V S+ G+ +
Sbjct: 61 GAVPQLTVHSQT-AIVDWPEQVAKLNGLPGIIGATPSITTQAMVQSPSNIGAAQIYGIYP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S + + G+ +I+G +LAR L + GDKI +LS G V
Sbjct: 120 EQEKSLPNTTKQVYSGDFDALESGKYRIILGAELARMLDVVPGDKIRVLSGDGVVYTPLG 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ + D + Y+ +AQ + + + +++ DP K
Sbjct: 180 PVPSQRKFTVAGVFEMGSQVDATLAYVHHDDAQRLMRQKAGEIKELRLYLDDPFNAAKIA 239
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ V DW+ Y F +
Sbjct: 240 PEVIDQFAVPVTTTDWRDTYGHLFGAVK 267
>gi|323698048|ref|ZP_08109960.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Desulfovibrio sp. ND132]
gi|323457980|gb|EGB13845.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Desulfovibrio desulfuricans ND132]
Length = 409
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 92/269 (34%), Positives = 142/269 (52%), Gaps = 4/269 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
RFE VA RYLF+ RK +FIS+ S + GV IGV ALIVV+ VMNGF D+ ++LG+
Sbjct: 1 MRFETFVALRYLFALRKQSFISVISLFAVCGVAIGVGALIVVIGVMNGFSTDLRDKILGV 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N H++I + DY+ +A+ +P V V PFV + +S + VL ++
Sbjct: 61 NAHILITSLRGGISDYEELADEAKKVPGVTGVTPFVYSEVMLSTRTGVKGVVLRGIDPST 120
Query: 125 DFSYLQNSFSRFYG--NVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S L S G + ND G+IIG +LA+ LG++ G +N+LSP G + G
Sbjct: 121 SSSVLSLSKDMISGSVSRLNDNGDFPGIIIGSELAKRLGLTEGSLVNLLSPSGRTSAAGF 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTH 241
+ + V G+FR +YD+ M Y+S+ A+ + VSG+E+ V D ++K
Sbjct: 181 TPKVSRFAVAGIFRTGMFEYDSSMGYVSIPAARQLLGFKGDLVSGLEISVDDVYNVKKIS 240
Query: 242 ENIV-RILGNGVVVIDWQQRYQIFFSCYE 269
++ ++ V V +WQ+ F+ E
Sbjct: 241 NDLRDKVASFTVYVRNWQEMNANLFAALE 269
>gi|149184690|ref|ZP_01863008.1| ABC-type transport system [Erythrobacter sp. SD-21]
gi|148832010|gb|EDL50443.1| ABC-type transport system [Erythrobacter sp. SD-21]
Length = 413
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 80/267 (29%), Positives = 124/267 (46%), Gaps = 3/267 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ S FE +A RYL R AFI++ + IS VM+ V L++VMSVMNGFR +++ +++
Sbjct: 2 LLSPFERTIAKRYLLPGRSEAFIALVAGISITVVMLSVAMLVIVMSVMNGFRAELLDKIV 61
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+NGH ++Q L D++ + + P V++ P + + + +L
Sbjct: 62 GLNGHAIVQAYGGRLDDWENVLEEVRQTPGVVEASPLIEQPLLTTFNGRVEAILLRGNTQ 121
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ GN+ V IG LA N+G +GD I I++P G TP G
Sbjct: 122 ADIR---ELGEKVVSGNMDALQPGASKVAIGVRLAENIGARVGDTITIINPQGRSTPFGT 178
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R Y V +F + DYD V M +Q+AQ + + IEV V DPD + +
Sbjct: 179 VPRQVGYEVAAIFEVGVYDYDGAFVVMPMQDAQTLLLSGDRIGMIEVQVTDPDEVGEILA 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L VV DW+ F +
Sbjct: 239 PVQESLAGRAVVRDWKTINATLFEALQ 265
>gi|94498255|ref|ZP_01304815.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
protein [Sphingomonas sp. SKA58]
gi|94422257|gb|EAT07298.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
protein [Sphingomonas sp. SKA58]
Length = 408
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 80/259 (30%), Positives = 124/259 (47%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
++A RYL + FI + + IS + VM+GV ALI+VMSVMNGFR ++ +++G+NGH V
Sbjct: 1 MIAKRYLLPGKGEGFIFLVAGISLVAVMLGVAALIIVMSVMNGFRAELFDKIVGLNGHAV 60
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+Q L D+Q I + P V P + + + ++ +
Sbjct: 61 VQGYGGRLPDWQSILKQAKATPGVTSATPMIEQPLLATFNGRVEAVLVRGMTVPDIRANK 120
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
G++ + V IG LA NLG+ +GD + I++P G TP G R SY
Sbjct: 121 TLKGKVLAGSLDSLTPGAGKVGIGSRLAENLGVQLGDSLTIINPAGRSTPFGTVPRQISY 180
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
V +F + DYD MV M +++AQ L + V IEV +PD + + E + +
Sbjct: 181 QVSAIFEVGIYDYDKAMVVMPVEDAQTLLLLGDVVGMIEVETVNPDRVGQILEPLAAKVA 240
Query: 250 NGVVVIDWQQRYQIFFSCY 268
V+ DW+Q F
Sbjct: 241 GRAVITDWRQMNASLFEAL 259
>gi|145298867|ref|YP_001141708.1| lipoprotein releasing system transmembrane protein LolE [Aeromonas
salmonicida subsp. salmonicida A449]
gi|142851639|gb|ABO89960.1| Lipoprotein releasing system transmembrane protein LolE [Aeromonas
salmonicida subsp. salmonicida A449]
Length = 413
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 56/267 (20%), Positives = 100/267 (37%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY S R+N FI+ S S IG+ +GVMALI+ +S MNGF ++ RVL
Sbjct: 1 MFKPLPLFLGLRYSRSRRRNGFIAFISASSLIGIALGVMALILGLSAMNGFERELKDRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + PL D+ + + L P V P ++ + ++ G+ VR +
Sbjct: 61 SVVPHGELMGMEAPLPDWPKLRDYLLAQPGVEAAAPVITLNGLLEHGNA-LKGLQVRAVL 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ L ++ G + G+ +I + L G+
Sbjct: 120 PELEANLSDAGKYMTGRGLRELQVGEHGLILGKTIADKLGVKIGDSVALLLPQGGDAAGI 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D + +M L +AQ + N V G + V D +
Sbjct: 180 KNPKRESLKVVGLLEIGGQLDGMLGFMHLADAQAMTGMGNTVEGFSLKVSDVLKAQSITV 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + V + W R + +
Sbjct: 240 AAAQKFPHYVYISSWMSRQGYLYQDIQ 266
>gi|330445695|ref|ZP_08309347.1| liporeleasing system, transmembrane, LolC/E family protein
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328489886|dbj|GAA03844.1| liporeleasing system, transmembrane, LolC/E family protein
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 401
Score = 139 bits (349), Expect = 4e-31, Method: Composition-based stats.
Identities = 66/268 (24%), Positives = 115/268 (42%), Gaps = 8/268 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RYL + F S++S G+ IGVMALI VMSVMNGF + + R+L
Sbjct: 1 MFHPVSFFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMALITVMSVMNGFEDQLKGRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ V+ + + L +P V+ V G+A + SS +G ++
Sbjct: 61 GVLPQAVVSSTDGRVPLSENAPEVLKKLPHVVNVTAITRGEAIIQSASSITAGTMIGIEP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
N + G++S+ VIIG+ +A +LG+ GDKI ++
Sbjct: 121 NQYE---PIAKHLMVGSLSSLTPGSFKVIIGQAMAVSLGVQPGDKIRLMVTSASQFTPLG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ + D D +VY ++ +A + + ++G +++ DP + +
Sbjct: 178 RMPSQRNFEVAGIYDTGSDVDQQLVYTNISDAGRLLRYKLDQMTGWRLYLDDPFTVPELK 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
E L NG DW+ + F +
Sbjct: 238 EK----LPNGWTWSDWRDQRGELFQAVK 261
>gi|188997478|ref|YP_001931729.1| protein of unknown function DUF214 [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188932545|gb|ACD67175.1| protein of unknown function DUF214 [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 401
Score = 139 bits (349), Expect = 4e-31, Method: Composition-based stats.
Identities = 79/265 (29%), Positives = 129/265 (48%), Gaps = 4/265 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ +A RYLFS + +S S IS IG+ +GV ALI+ M+VM GF + ++L
Sbjct: 1 MPLYLKIALRYLFSTKSK-LLSFMSIISIIGITLGVAALIITMAVMGGFMYGIKSKLLET 59
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H++I + +YQ + ++ + VI PFV QA S+ + IS
Sbjct: 60 APHIMIVKADGKFQEYQEVVQKIKDVEGVIDYEPFVYSQAIAGKSSNLIPVYVRGVISEK 119
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
D +++ G +I+GKD+A L + +GD +NI+SP G TP+G
Sbjct: 120 DKNFMALDKKLISGRYDL---TDDNIILGKDVALALNVWVGDSVNIVSPVGRKTPIGFLP 176
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ K + V G+ +YD+ V MSL+ AQ +F+L A++GI++ +KDP E +
Sbjct: 177 KLKEFKVAGIVEFGIYEYDSTFVCMSLENAQSFFDLNGAITGIQLKIKDPFNPSIVKEKL 236
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ L +V W + F +
Sbjct: 237 EKRLDFPYIVRSWTDMNKSLFQALQ 261
>gi|332185038|ref|ZP_08386787.1| liporeleasing system, transmembrane , LolC/E family protein
[Sphingomonas sp. S17]
gi|332014762|gb|EGI56818.1| liporeleasing system, transmembrane , LolC/E family protein
[Sphingomonas sp. S17]
Length = 416
Score = 139 bits (348), Expect = 5e-31, Method: Composition-based stats.
Identities = 80/266 (30%), Positives = 126/266 (47%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
I SR+E ++A RYL + AFI + + IS + VM+GV AL++VMSVMNGFR ++ +++
Sbjct: 2 ILSRYERMIARRYLLPGKGEAFIFLVASISLVAVMLGVAALVIVMSVMNGFRAELFDKIV 61
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+NGH V+Q L D++ I P V +P + + + ++
Sbjct: 62 GLNGHAVVQGTGGRLPDWRDIVREAKATPGVTSAVPMIEQPLMATYNGRVEAVLVRGMRV 121
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
GN+ + + IG LA LG +G +I+++SP G TP G
Sbjct: 122 GDIRGNSAIRSKVIMGNLMSVTPGSNRIAIGSRLAEALGAQVGSEISLISPQGQTTPFGT 181
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R SYTV +F + DYD V M +++AQ + + V +EV D D + +
Sbjct: 182 VPRIVSYTVGAIFEIGVYDYDKAYVIMPIEDAQTLLLMGDTVGMVEVQTTDADRVGQILA 241
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCY 268
+ LG V+ DW+ F
Sbjct: 242 PLADKLGGRAVIADWRTMNAQLFEAL 267
>gi|167626561|ref|YP_001677061.1| lipoprotein release ABC transporter permease [Francisella
philomiragia subsp. philomiragia ATCC 25017]
gi|167596562|gb|ABZ86560.1| ABC transporter, involved in lipoprotein release, permease
component [Francisella philomiragia subsp. philomiragia
ATCC 25017]
Length = 420
Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats.
Identities = 70/273 (25%), Positives = 125/273 (45%), Gaps = 7/273 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY+ + ++N FISI S ISF+G+ +GV LI VMSVMNGF + + R+L
Sbjct: 1 MFRSLPLFIGLRYIRAKKRNRFISIISAISFLGISLGVAVLITVMSVMNGFDQQIKNRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ + + Q + D+ +A ++ + + + ++GGS I
Sbjct: 61 MMVPPLKVYQMGGQVTDWPKLAKEVEKSALGVTAAAPIVESQGLLSANNGGSTTAFVQIQ 120
Query: 123 NSDFSYLQNSFSRFYGNVSN-----DFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
+ Y + D + G +++G LA +LG+S+GDK+ ++ P +
Sbjct: 121 GIEPKYQTKVLPIGDHIIEGKLSSLDDNEGYNIVLGSALANSLGVSVGDKVTLIVPKISL 180
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
TP GM R K +TV G+F YD ++++ AQ F N+VS +++ +K+
Sbjct: 181 TPAGMIPRIKQFTVSGVF-SVSYQYDAYYAMINIKNAQKVFETGNSVSSLQLGLKNIYDA 239
Query: 238 EKTHENIVR-ILGNGVVVIDWQQRYQIFFSCYE 269
+ + DW + FF +
Sbjct: 240 PLVKNKLNDGAIAPYYFTRDWTDENKSFFDALK 272
>gi|260427455|ref|ZP_05781434.1| ABC lipoprotein efflux transporter, inner membrane subunit, LolE
[Citreicella sp. SE45]
gi|260421947|gb|EEX15198.1| ABC lipoprotein efflux transporter, inner membrane subunit, LolE
[Citreicella sp. SE45]
Length = 428
Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats.
Identities = 80/275 (29%), Positives = 129/275 (46%), Gaps = 11/275 (4%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE ++AWRYL + R +S+ ++IS +G+ + V ALI +SV +GFR + + +LG
Sbjct: 8 FAPFEWMIAWRYLRARRAEGGVSVMTWISLVGITLAVFALIATLSVRSGFRAEFVDTILG 67
Query: 64 INGHVVIQQKY---------YPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
N HV + + DY A R+ +P V +V P V GQ +
Sbjct: 68 ANAHVTVYAQSREDEFGRVVRTFPDYTQRAERVAEVPGVTRVAPLVKGQVMGTANGRNAG 127
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ ++ + + + +G+ IG +AR LG+ +GD++ ++SP
Sbjct: 128 VEVFGIAADDLAAIPRIADPETGQGDM--ARFDEGIAIGSGVARELGVGVGDEVRLISPD 185
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G T G+ R SY V+ +F D D YM +EAQLYFN E +EV +DP
Sbjct: 186 GVKTAFGVSPRVVSYEVVYIFTAGRYDIDRTRAYMPFEEAQLYFNREGVADELEVMTEDP 245
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ +E + + G G ++ WQ F E
Sbjct: 246 EHVEDIALGVQQAAGQGALIWTWQDASGAFLRALE 280
>gi|308272632|emb|CBX29236.1| hypothetical protein N47_J02170 [uncultured Desulfobacterium sp.]
Length = 412
Score = 138 bits (347), Expect = 7e-31, Method: Composition-based stats.
Identities = 85/272 (31%), Positives = 133/272 (48%), Gaps = 6/272 (2%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FE+ + RYL + +K +FIS+ + +S +GVM+GVMALIVV++VM GF D+ R+LG
Sbjct: 1 MMSFELFIGGRYLRARQKQSFISLITILSVVGVMVGVMALIVVIAVMAGFETDLKSRILG 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSS------GGSGVL 117
+ HVV+ + DY + + I V PF+ Q + S G
Sbjct: 61 VESHVVVMRHGGEFSDYPAVLKNIRKINGVKDAAPFIYTQVMLKSSSGVSGAVLKGVDPK 120
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
G + L + + G+I+GK+LA L + GDKI ++SP G +
Sbjct: 121 AEGRIVKNLHALLLKNDEQEIKNNGYPNAVPGIILGKELAEKLRVYKGDKIYLISPAGMI 180
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
+P+G K Y V +F DYD + Y+++++AQ + +++GIEV V D
Sbjct: 181 SPVGYLPSMKQYIVKDIFESGIHDYDASLAYINIEDAQKILRMNKSITGIEVNVIDIYNA 240
Query: 238 EKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
K ENI+ +G DW Q + FS +
Sbjct: 241 RKIAENIIDDIGFPYWARDWMQMNKNLFSALK 272
>gi|307292879|ref|ZP_07572725.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Sphingobium chlorophenolicum L-1]
gi|306880945|gb|EFN12161.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Sphingobium chlorophenolicum L-1]
Length = 416
Score = 138 bits (347), Expect = 7e-31, Method: Composition-based stats.
Identities = 86/266 (32%), Positives = 126/266 (47%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
I SR+E ++A RYL + FI + + IS + VM+GV ALI+VMSVMNGFR ++ +++
Sbjct: 2 ILSRYERMIAKRYLLPGKGEGFIFLVAGISLVAVMLGVAALIIVMSVMNGFRAELFDKIV 61
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+NGH V+Q L D++ + P V P + S + ++
Sbjct: 62 GLNGHAVVQGYGGRLPDWKAVLKEAKATPGVTSATPLIEQPLLGSFQGRVEAVLVRGMTV 121
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
N + G++S G V IG LA NLGI +GD I I++P G TP G
Sbjct: 122 NDIRNNATLKAKVIAGSLSTLTANGDKVAIGSRLAENLGIQLGDSITIINPAGRSTPFGT 181
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R SY V +F + DYD V M +++AQ L + V IEV + D + E
Sbjct: 182 VPRQVSYQVAAIFEVGIYDYDKAFVVMPMEDAQTLLLLGDVVGMIEVETVNADKVAAILE 241
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + V DW+Q F
Sbjct: 242 PLAGKVAGRATVTDWRQMNASLFEAL 267
>gi|259415802|ref|ZP_05739722.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Silicibacter sp. TrichCH4B]
gi|259347241|gb|EEW59018.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Silicibacter sp. TrichCH4B]
Length = 427
Score = 138 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 82/275 (29%), Positives = 131/275 (47%), Gaps = 11/275 (4%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FSRFE ++AWRYL + R +S+ ++IS IG+ + V ALI ++V +GFR + + +LG
Sbjct: 7 FSRFEWMIAWRYLRARRSEGGVSVMTWISLIGITLAVFALIATLAVRSGFRSEFVGTILG 66
Query: 64 INGHVVIQQK---------YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
N H + + DY +A+ + +P V++ P + GQ S
Sbjct: 67 ANAHATVYAHGEVTEAGTLDRRITDYAALADAVGQVPGVLQAAPLIKGQVMASRGDRNAG 126
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ +++ ++ + +G+ IG +AR LG+SIGDK+ ++SP
Sbjct: 127 VQVYGI--HAEDLAEIPGVAQSDVAYGDLGRFDEGIAIGSGVARALGLSIGDKVKLISPN 184
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G T G R +Y V+ +F D DN Y+ EAQ YFN E A IEV V DP
Sbjct: 185 GVKTAFGTSPRVNAYEVVYVFTAGRYDIDNTRAYLPFAEAQSYFNREGAADEIEVMVDDP 244
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ +++ +V+ G V W+ F E
Sbjct: 245 ERVDQYILPLVQAAGQSYGVWSWRDSSGGFLRALE 279
>gi|170737505|ref|YP_001778765.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Burkholderia cenocepacia MC0-3]
gi|169819693|gb|ACA94275.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia cenocepacia MC0-3]
Length = 417
Score = 138 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 66/268 (24%), Positives = 119/268 (44%), Gaps = 4/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ FE + RY R+ + F+S + + G+ +GV ALIVV+SVMNGFR ++
Sbjct: 1 MKLPFEWQIGLRYARGGRRSAGDGFVSFIAGAAMAGIALGVAALIVVLSVMNGFRTEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV I + D++ + V V P+V QA ++ + L
Sbjct: 61 RMLSVLAHVEIFSPSGAMPDWRLTVHESLQNAAVRTVAPYVDAQALLTNAGNVTGVALRG 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + + G + G+++G LA L + IGD+I +P
Sbjct: 121 IDPVLEPRVSEIARKLKTGRLDALVPGEMGIVLGAALADALHVKIGDRITFFAPGNTARL 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
R + + V+G F YD+ + Y+ +++AQ FN+ A +GI + + D +
Sbjct: 181 GDALPRFRQFNVVGTFESGHYQYDSALAYIHIRDAQQLFNVP-APTGIRLRLDDLQHAPE 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSC 267
+ R L + + DW ++ + +F
Sbjct: 240 IALALSRTLSGNLYIRDWTRQNRTWFEA 267
>gi|320106710|ref|YP_004182300.1| hypothetical protein AciPR4_1483 [Terriglobus saanensis SP1PR4]
gi|319925231|gb|ADV82306.1| protein of unknown function DUF214 [Terriglobus saanensis SP1PR4]
Length = 409
Score = 138 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 66/269 (24%), Positives = 117/269 (43%), Gaps = 4/269 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
RFE+ +A RYL + R+ A + + + IS +GV GV +LIV +++ NG R D+ R+LG
Sbjct: 1 MRFELFIAARYLRAKRRQAVVGVITAISVVGVAAGVASLIVALAITNGMRRDLQSRLLGS 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
HV + + + + + G L++G+ +
Sbjct: 61 TAHVDLMRVAADGIRDWKPLLERMRKLPHVTAAAPGLYGQVLISRGPRSGGGLIKGVLPA 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIG----KDLARNLGISIGDKINILSPYGDVTPM 180
D + + + D D+ + DLA +G +GD + + SP G++TP+
Sbjct: 121 DERTVSDLLQSIKTGSAADLDQTSSAQLPIVLGSDLAETIGARVGDTVLVTSPQGELTPL 180
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G+ + + Y + G+F F YD+ ++ L +AQ F + +S I V D +K
Sbjct: 181 GLIPKYQRYRLAGVFHSGFYQYDSSYAFLRLADAQKLFTEPDLISVISFKVDDLYHADKI 240
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I G G +W + + F E
Sbjct: 241 AKEIEAAAGPGFQTTNWMGQNRELFRALE 269
>gi|239946768|ref|ZP_04698521.1| lipoprotein releasing system transmembrane protein [Rickettsia
endosymbiont of Ixodes scapularis]
gi|239921044|gb|EER21068.1| lipoprotein releasing system transmembrane protein [Rickettsia
endosymbiont of Ixodes scapularis]
Length = 451
Score = 138 bits (346), Expect = 9e-31, Method: Composition-based stats.
Identities = 92/268 (34%), Positives = 137/268 (51%), Gaps = 2/268 (0%)
Query: 2 SIFSR-FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+ + F +A+RY + + F+SI S S +GVMIGV ALIVVMSVMNGF ++ K
Sbjct: 36 KMINNNFIFKIAFRYFRAKKNEKFVSIISAFSLVGVMIGVAALIVVMSVMNGFHIELTKN 95
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
++G+NG +VI ++ + +Y+ I +L V V GQA + SGVLV+G
Sbjct: 96 IIGLNGDIVINRQGGSIDNYEEIKAKLLKQDYVKHVTFIAHGQALAL-GKNNNSGVLVKG 154
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ D S F ++F + +G+ LA NLG+++GDKI ++SP T
Sbjct: 155 MKLKDLSLRNEIFKNVNFGSFDNFHGKNVIALGEQLASNLGVTVGDKIRLISPNSVSTAF 214
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G RSK + V+ +F DYD + M L AQ + +L N ++ IE+ DPD
Sbjct: 215 GSMPRSKEFKVIAIFNSGMYDYDLTTILMPLTAAQNFLSLGNDINLIEINSLDPDKALAY 274
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCY 268
I +LG + V +WQ F S
Sbjct: 275 SYKIQSLLGPNLYVFNWQTLNSQFLSAL 302
>gi|254465760|ref|ZP_05079171.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Rhodobacterales bacterium Y4I]
gi|206686668|gb|EDZ47150.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Rhodobacterales bacterium Y4I]
Length = 428
Score = 138 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 81/275 (29%), Positives = 126/275 (45%), Gaps = 11/275 (4%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FSRFE I+AWRYL + + +S+ ++IS IG+ + V ALI ++V +GFR + + +LG
Sbjct: 8 FSRFEWIIAWRYLRARKAEGGVSVMTWISLIGITLAVFALIATLAVRSGFRSEFVGTILG 67
Query: 64 INGHVVIQQKYYPL---------VDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
N HV + DY+ +A + +P V + P V GQ +
Sbjct: 68 ANAHVTVYSYGEVNEAGVLDRSLKDYEALAETVAAVPGVTRAAPLVKGQVMANLRQRNAG 127
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ + ++ +V + G+ IG +AR LG+S+GDKI ++SP
Sbjct: 128 VEVFGISAKDIQGI--PGVAQSEESVGDLARFEDGIAIGSGVARELGVSVGDKIKLISPN 185
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G T G R +Y V+ +F D D VY+ EAQ +FN E IEV V +P
Sbjct: 186 GVKTAFGTSPRVNAYEVVYVFTAGRWDIDRTRVYLPFAEAQAFFNREGVADEIEVMVGNP 245
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + +I + G V W+ F E
Sbjct: 246 ENADALALDIQQAAGGTAGVWTWRDASGGFLRALE 280
>gi|163745978|ref|ZP_02153337.1| lipoprotein releasing system transmembrane protein, putative
[Oceanibulbus indolifex HEL-45]
gi|161380723|gb|EDQ05133.1| lipoprotein releasing system transmembrane protein, putative
[Oceanibulbus indolifex HEL-45]
Length = 431
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 77/274 (28%), Positives = 126/274 (45%), Gaps = 11/274 (4%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE ++AWRYL + R +S+ ++IS IG+ + V ALI +SV +GFR + + +LG
Sbjct: 11 FAAFEWMIAWRYLRARRAEGGVSVMTWISLIGITLAVFALIATLSVRSGFRAEFVDTILG 70
Query: 64 INGHVVIQQKYYPLVDYQ---------FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
N HV + Q +A + +P V +V P V Q + S
Sbjct: 71 ANAHVTVYTMGEVQETGQIDRTIANYTEMAAEVAKVPGVTRVAPLVRQQVMANRRQSNAG 130
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ S+ + S +G+ IG +A++LG+ +GD I ++SP
Sbjct: 131 VEVFGIASDDLMTIPGIQPSERSFGDI--GRFEEGIAIGSGVAQSLGVQVGDTIKLISPN 188
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G T G R Y V+ +F D D VY+ + EAQ +FN E +EV V+DP
Sbjct: 189 GVKTAFGTSPRVNGYEVVYIFSAGRYDIDKTRVYLPIAEAQSFFNREGVADELEVMVEDP 248
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
++++ +++ G+ V W+ F S
Sbjct: 249 ESVDTMARALMQAAGDRTQVWTWRDASGSFLSAL 282
>gi|114763440|ref|ZP_01442847.1| lipoprotein releasing system transmembrane protein LolE [Pelagibaca
bermudensis HTCC2601]
gi|114543978|gb|EAU46989.1| lipoprotein releasing system transmembrane protein LolE
[Roseovarius sp. HTCC2601]
Length = 428
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 82/275 (29%), Positives = 133/275 (48%), Gaps = 11/275 (4%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE ++AWRYL + R +S+ ++IS +G+ + V ALI ++V +GFR + + +LG
Sbjct: 8 FAPFEWMIAWRYLRARRAEGGVSVMTWISLVGITLAVFALIATLAVRSGFRAEFVDTILG 67
Query: 64 INGH---------VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
N H + DY A R+ +P VI+V P V GQ +
Sbjct: 68 ANAHVTVYASQRLDEYDRPVRTFDDYAERAARVAEVPGVIRVAPLVKGQVMGTAAGRNAG 127
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ + + + ++F +G+ IG +AR LG+S+GD++ ++SP
Sbjct: 128 VEVFGIAEDDLKGIPRIADPETGQGDIDNF--EQGIAIGSGVARELGLSVGDQLKLISPD 185
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G T G+ R K Y V+ +F D D VYM +EAQLYFN E +EV + DP
Sbjct: 186 GVRTAFGVSPRVKLYDVVYIFTAGRYDIDRTRVYMPFEEAQLYFNREGVADELEVMIDDP 245
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ +E+ +++ G G ++ WQ F E
Sbjct: 246 ERVERLALPVLQAAGEGALIWTWQDASGAFLRALE 280
>gi|78061357|ref|YP_371265.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Burkholderia sp. 383]
gi|77969242|gb|ABB10621.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia sp. 383]
Length = 427
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 69/265 (26%), Positives = 119/265 (44%), Gaps = 4/265 (1%)
Query: 6 RFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
FE + RY R+ + F+S + + G+ +GV ALIVV+SVMNGFR ++ R+L
Sbjct: 14 PFEWQIGLRYARGGRRSAGDGFVSFIAGAAMAGIALGVAALIVVLSVMNGFRTEVRDRML 73
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ HV I + D++ A+ P V V P+V QA ++ S L
Sbjct: 74 SVLAHVEIFSPTGAMPDWRLTAHESLQNPAVRAVAPYVDAQALLTNAGSVTGVALRGIDP 133
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + G + G+++G LA L + IGD+I +P
Sbjct: 134 VLEPRVSEIARKLKTGRLDALVPGEMGIVLGSALADALHVKIGDRITFFAPGNRARIGDA 193
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + + V+G F YD+ + Y+ L++AQ FN+ A +GI + + D
Sbjct: 194 LPQFRQFNVVGTFESGHYQYDSALAYIHLRDAQTLFNVR-APTGIRLRLDDLQRAPDVAL 252
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSC 267
+ R L + + DW ++ + +F
Sbjct: 253 ELSRTLSGDLYIRDWTRQNRTWFEA 277
>gi|51473878|ref|YP_067635.1| hypothetical protein RT0694 [Rickettsia typhi str. Wilmington]
gi|51460190|gb|AAU04153.1| conserved hypothetical protein [Rickettsia typhi str. Wilmington]
Length = 415
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 88/264 (33%), Positives = 136/264 (51%), Gaps = 1/264 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ F +A RY + + F+SI S S +GVMIGV ALIVVMSVMNGF ++ K ++G+
Sbjct: 4 NNFSFNIALRYFRAKKNEKFVSIISAFSLVGVMIGVAALIVVMSVMNGFHLELTKNIIGL 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
NG ++I ++ + +Y+ I L + V GQA S SGVL++GI +
Sbjct: 64 NGDIIINRQGGNIDNYEEIKTTLLKQNYIKHVTYIAHGQALAL-GKSNNSGVLIKGIKLN 122
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
D S F ++F + +G+ LA NLG+++G+K+ ++SP T G
Sbjct: 123 DLSLRNGIFKNVNFGSFDNFHGKNVIALGEQLASNLGVTVGEKLRLISPNSVSTAFGSIP 182
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
RSK + ++ +F DYD + M L AQ + +L N ++ IE+ DPD + I
Sbjct: 183 RSKEFEIIAIFNSGMYDYDLTTILMPLTAAQNFLSLGNDINSIEINSLDPDQAIQYSYKI 242
Query: 245 VRILGNGVVVIDWQQRYQIFFSCY 268
+LG + V +WQ F S
Sbjct: 243 QSLLGPNLYVFNWQTLNSQFLSAL 266
>gi|241668992|ref|ZP_04756570.1| ABC transporter, involved in lipoprotein release, permease
component [Francisella philomiragia subsp. philomiragia
ATCC 25015]
gi|254877524|ref|ZP_05250234.1| ABC transporter [Francisella philomiragia subsp. philomiragia ATCC
25015]
gi|254843545|gb|EET21959.1| ABC transporter [Francisella philomiragia subsp. philomiragia ATCC
25015]
Length = 420
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 70/273 (25%), Positives = 125/273 (45%), Gaps = 7/273 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY+ + ++N FISI S ISF+G+ +GV LI VMSVMNGF + + R+L
Sbjct: 1 MFRSLPLFIGLRYIRAKKRNRFISIISAISFLGISLGVAVLITVMSVMNGFDQQIKNRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ + + Q + D+ +A ++ + + + ++GGS I
Sbjct: 61 MMVPPLKVYQMGGQVTDWLKLAKEVEKSAPSVTAAAPIVESQGLLSANNGGSTTAFVQIQ 120
Query: 123 NSDFSYLQNSFSRFYGNVSN-----DFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
+ Y + D + G +++G LA +LG+S+GDK+ ++ P +
Sbjct: 121 GIEPKYQTKVLPIGDHIIEGKLSSLDDNEGYNIVLGSALANSLGVSVGDKVTLIVPKISL 180
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
TP GM R K +TV G+F YD ++++ AQ F N+VS +++ +K+
Sbjct: 181 TPAGMIPRIKQFTVSGIF-SVSYQYDAYYAMINIKNAQKVFETGNSVSSLQLGLKNIYDA 239
Query: 238 EKTHENIVR-ILGNGVVVIDWQQRYQIFFSCYE 269
+ + DW + FF +
Sbjct: 240 PLVKNKLNDGAIAPYYFTRDWTDENKSFFDALK 272
>gi|322435055|ref|YP_004217267.1| protein of unknown function DUF214 [Acidobacterium sp. MP5ACTX9]
gi|321162782|gb|ADW68487.1| protein of unknown function DUF214 [Acidobacterium sp. MP5ACTX9]
Length = 415
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 73/276 (26%), Positives = 128/276 (46%), Gaps = 11/276 (3%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
RFE+ +A RYL + R+ A I + + IS +GV GV +LI+ +++ NG R D+ +R+LG
Sbjct: 1 MRFELFIAARYLRAKRRQAVIGVITAISVLGVAAGVASLIIALAITNGMRRDLQERLLGS 60
Query: 65 NGHVVIQQKY-YPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSG----------G 113
HV + + + D++ + ++L +P V P + GQ +S +
Sbjct: 61 TSHVELMRVSADGIRDWRPLLDKLRALPHVTAAAPGLYGQVLISRGARSGGGLVKGVIPA 120
Query: 114 SGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSP 173
V + + + D ++IGKDLA LG +GD + + SP
Sbjct: 121 DEEKVSDLLQAVTRGSSRPLQPQVNPDAGDAQATPPIVIGKDLAETLGAEVGDTVLVTSP 180
Query: 174 YGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKD 233
G++TP+G+ R + + V+G+F F YD+ ++ L +AQ F+ + +S I V D
Sbjct: 181 QGELTPLGLVPRYQRFQVVGIFASGFYQYDSSYTFVRLTDAQRLFSEPDLISVISFKVDD 240
Query: 234 PDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
I G G +W ++ + F +
Sbjct: 241 LYRANIIGRTIEETAGKGFQATNWMEQNRELFRALK 276
>gi|302037375|ref|YP_003797697.1| lipoprotein-releasing system, transmembrane protein lolC
[Candidatus Nitrospira defluvii]
gi|300605439|emb|CBK41772.1| Lipoprotein-releasing system, transmembrane protein LolC
[Candidatus Nitrospira defluvii]
Length = 425
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 73/287 (25%), Positives = 127/287 (44%), Gaps = 20/287 (6%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +E+ + RYL + R+N IS + +S G+ +GV ALI + +M GF+ED+ ++L
Sbjct: 1 MALPYEIFIGLRYLRAKRRNRTISFNTIVSIAGITLGVAALIGTVGIMTGFKEDVQAKIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G H+++ + + + + + + SG G+++RGI
Sbjct: 61 GTTAHILVNDRMKESMVDYEEQVKKVAAVPDVVAATPFIFRQVLLTSPSGVQGIILRGID 120
Query: 123 NSDFSYLQNSFSRFYGNVSND--------------------FDRGKGVIIGKDLARNLGI 162
+ + +D G+I+GK+L+ LG
Sbjct: 121 PAREGTVTELAHNLVNGNLDDLARQNKVVIPEKEREPNGPETAMRPGIILGKELSMRLGA 180
Query: 163 SIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN 222
GD +N++SP G VT M + + + V+G+F+ +YD+ + Y+ L EAQ +FN+
Sbjct: 181 FPGDTLNVVSPVGPVTGASMTPKIRQFVVVGIFQSGMYEYDSSLAYIELGEAQKFFNMGA 240
Query: 223 AVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+V+GIEV V D I LG DW Q + FS +
Sbjct: 241 SVTGIEVKVTDVFRAADIARAIEHHLGFAFWARDWMQMNRNLFSALK 287
>gi|126732791|ref|ZP_01748586.1| lipoprotein releasing system transmembrane protein LolE [Sagittula
stellata E-37]
gi|126706787|gb|EBA05858.1| lipoprotein releasing system transmembrane protein LolE [Sagittula
stellata E-37]
Length = 427
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 80/275 (29%), Positives = 132/275 (48%), Gaps = 11/275 (4%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE ++AWRYL + R +S+ ++IS +G+ + V ALI ++V +GFR + + +LG
Sbjct: 7 FAPFEWMIAWRYLRARRAEGGVSVMTWISLVGITLAVFALIATLAVRSGFRAEFVDTILG 66
Query: 64 INGHVVIQ---------QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
N H+ + + DY+ +A +++ +P + +V P V GQ + +
Sbjct: 67 SNAHMTVYSTTRTDEAGNPDRTIADYEGMAQQVERVPFIQRVAPLVKGQVMATANGNNAG 126
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ + + + G+GV IG +A LG+ +GD + ++SP
Sbjct: 127 VEVFGIAPDD--LKAIPRIADPETGRGDLDRFGEGVAIGSGVAMMLGVGVGDDVKLISPN 184
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G T G+ R KSYTV +F D D +YM EAQLYFN E +EV V DP
Sbjct: 185 GVKTAFGVSPRVKSYTVTWIFTAGRYDIDRTRIYMPFTEAQLYFNREGVADELEVIVSDP 244
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ +E + + +G G ++ WQ F E
Sbjct: 245 EDVESFVQPVSEAVGPGALIWTWQDASGGFLRALE 279
>gi|148359829|ref|YP_001251036.1| lipoprotein ABC transporter [Legionella pneumophila str. Corby]
gi|148281602|gb|ABQ55690.1| lipoprotein ABC transporter [Legionella pneumophila str. Corby]
Length = 451
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 78/269 (28%), Positives = 137/269 (50%), Gaps = 4/269 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY S +KN F+S S S +G+ +GVM LI V+SVMNGF +++ +R
Sbjct: 37 MYKPLALFIGLRYTRSRKKNHFVSFISLSSMLGIGMGVMVLITVLSVMNGFDQEIHRRFF 96
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ + I L D+ + +++ IP + + P+V Q ++ VL +
Sbjct: 97 GMAPEITITGPDERLSDWPEVVKKVETIPGIKAIAPYVGSQGLLTHEGQVLPIVLTGILP 156
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S + GN D + G+I+GK LA +LG+ IGDK+ I+ P VTP GM
Sbjct: 157 EKEQSVTHLNKKLLAGN--MDNLKHFGIILGKGLADSLGVMIGDKVTIMIPQATVTPAGM 214
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGM-VYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKT 240
R K +TV+G+F + ++++++AQ ++ N VSGI++ + + +
Sbjct: 215 IPRFKRFTVVGVFSAGTGFNFDTKLAFINIEDAQKLMQMDKNDVSGIKMKINNVYKAPEL 274
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ +LG G V +W Q++ FF +
Sbjct: 275 SYELSDLLGEGYQVGNWTQQFGAFFEAVK 303
>gi|294677978|ref|YP_003578593.1| lipoprotein-releasing system transmembrane protein LolE
[Rhodobacter capsulatus SB 1003]
gi|294476798|gb|ADE86186.1| lipoprotein-releasing system transmembrane protein LolE
[Rhodobacter capsulatus SB 1003]
Length = 430
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 83/276 (30%), Positives = 133/276 (48%), Gaps = 13/276 (4%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE ++AWRYL + R +S+ ++IS IG+M+GV ALI+ ++V GFR + + +LG
Sbjct: 8 FSGFEFLIAWRYLRARRAEGGVSVMTWISLIGIMLGVAALIITLAVRAGFRAEFVDTILG 67
Query: 64 INGHVVIQQKYYP-----------LVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSG 112
N HV + + DY A R+ +P V + P + GQ +
Sbjct: 68 SNAHVTVYSAPMEVAPETGIFSSLMPDYAARAARIAQVPGVTRAAPLIRGQVMATMNDRS 127
Query: 113 GSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILS 172
+ + + + + S F G+G+ +G +LAR LG++ GD + ++S
Sbjct: 128 NVAEVYGISYENLMTIPRVAHSAQIDGEIESF--GQGIAMGSELARELGVAAGDTVKLIS 185
Query: 173 PYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK 232
P G TP G+ R +YTV+ +F D D +YM EAQ +FN E IEV VK
Sbjct: 186 PNGVKTPFGVSPRVNAYTVVYVFTAGRWDIDRTRIYMPFAEAQSFFNREGGADEIEVMVK 245
Query: 233 DPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
DP+ ++ ++ G G ++ W+ F
Sbjct: 246 DPEHVDDLTPQLIAAGGAGTMLWSWRDASGSFLRAL 281
>gi|90579503|ref|ZP_01235312.1| putative ABC transporter integral membrane subunit [Vibrio angustum
S14]
gi|90439077|gb|EAS64259.1| putative ABC transporter integral membrane subunit [Vibrio angustum
S14]
Length = 402
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 65/268 (24%), Positives = 113/268 (42%), Gaps = 7/268 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RYL + F S++S G+ IGVMALI VMSVMNGF + + R+L
Sbjct: 1 MFHPVSFFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMALITVMSVMNGFEDQLKGRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ V+ + + L +P V V G+A + +S +G ++
Sbjct: 61 GVLPQAVVSSADGRVPLSENAPKALKQLPHVTDVTAITRGEAIIQSANSIAAGTMIGIEP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
N S G +S+ V+IG+ LA LG+ GDKI ++
Sbjct: 121 NQYD---PISRHMMVGRLSDLTPGSFKVVIGQALAVELGVQPGDKIRLMVTSASQFTPIG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ + D D +VY ++ +A + + ++G +++ DP + +
Sbjct: 178 RMPSQRKFEVSGIYDTGSDVDKQLVYTNISDAGRLLRYKQDQMTGWRLYLDDPFVVPELA 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L NG DW+++ F +
Sbjct: 238 KL---KLPNGWTWSDWREQRGELFQAVK 262
>gi|117620209|ref|YP_856538.1| lipoprotein releasing system, transmembrane protein LolE [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
gi|117561616|gb|ABK38564.1| lipoprotein releasing system, transmembrane protein LolE [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
Length = 413
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 56/267 (20%), Positives = 103/267 (38%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY S R+N FI+ S S IG+ +GVMALI+ +S MNGF ++ RVL
Sbjct: 1 MFKPLPLFLGLRYSRSRRRNGFIAFISASSLIGIALGVMALILGLSAMNGFERELKNRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + PL ++ + + L P V P + + S+ G+ VR +
Sbjct: 61 SVVPHGELMGMEAPLPNWPKLRDYLLAQPGVEAAAPVIRLDGLLEHGSA-LKGLQVRAVL 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ L ++ + G + + G+ +I + L G+
Sbjct: 120 PELEANLSDAGNYMTGRGLRELEAGEHGLILGKTIADKLGVKIGDTVTLLLPQGGDAAGI 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D + +M L +AQ+ + +AV G + V D +
Sbjct: 180 KNPKRESLTVVGLLEIGGQLDGVLGFMHLADAQVITGMGSAVEGFSLKVNDVLKAQSITV 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + V + W R + +
Sbjct: 240 AAAQKFPHYVYISSWMSRQGYLYQDIQ 266
>gi|15604541|ref|NP_221059.1| hypothetical protein RP699 [Rickettsia prowazekii str. Madrid E]
gi|3861235|emb|CAA15135.1| unknown [Rickettsia prowazekii]
gi|292572333|gb|ADE30248.1| Lipoprotein releasing system,transmembrane protein, LolC/E family
protein [Rickettsia prowazekii Rp22]
Length = 415
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 89/264 (33%), Positives = 136/264 (51%), Gaps = 1/264 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ F +A+RY + + F+SI + S +GVMIGV ALIVVMSVMNGF ++ K ++G+
Sbjct: 4 NNFSFNIAFRYFRAKKNEKFVSIIAAFSLVGVMIGVAALIVVMSVMNGFHLELTKNIIGL 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
NG +VI ++ + +Y+ I L V V GQA S SGVLV+GI +
Sbjct: 64 NGDIVINRQGDNIDNYEEIKTTLLKQDYVKHVTYIAHGQALAL-GKSNNSGVLVKGIKLN 122
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
D S F ++F + +G+ LA NLG+++G+K+ ++SP T G
Sbjct: 123 DLSLRNGIFKNVNFGSFDNFHGKNVIALGEQLASNLGVTVGEKLRLISPNSVSTAFGSIP 182
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
RSK + ++ +F DYD + M L AQ + +L N ++ IE+ DPD I
Sbjct: 183 RSKEFQIIAIFNSGMYDYDLTTILMPLTAAQNFLSLGNDINSIEINSLDPDQAITYSYKI 242
Query: 245 VRILGNGVVVIDWQQRYQIFFSCY 268
+LG + V +W+ F S
Sbjct: 243 QSLLGPNLYVFNWKTLNSQFLSAL 266
>gi|77918853|ref|YP_356668.1| putative kinase [Pelobacter carbinolicus DSM 2380]
gi|77544936|gb|ABA88498.1| putative kinase [Pelobacter carbinolicus DSM 2380]
Length = 417
Score = 137 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 72/267 (26%), Positives = 128/267 (47%), Gaps = 4/267 (1%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+E V+ RYL + RK FIS+ SFIS GV +GV ALIVV++VM GF + + +++LG
Sbjct: 3 YEWFVSLRYLRAKRKQTFISVISFISIAGVTLGVAALIVVLAVMTGFHDGVRQQILGNVP 62
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS----GVLVRGIS 122
HV+IQQ+ + Y+ + ++ + + + + + +G
Sbjct: 63 HVLIQQQGGSIARYKDLVEQVRQTVPEAIAVNPFVSKEAMLLAHRNVAAVSVKGIEKGNK 122
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S+L + + +D + G+I+G D A LG+++GD +N++ P +VTP G+
Sbjct: 123 VFTQSFLNFRSEQVQSALFDDQEGLPGIILGLDTASTLGVALGDTVNVIPPKFNVTPFGL 182
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ K + V+G+ R D Y+ L +AQ + VSG+E+ + +
Sbjct: 183 IPKMKPFRVVGILEHRGGFLDAYFAYVDLLQAQQFLETREQVSGVEIELSSFEQSRPVTR 242
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L +V W+ + F S +
Sbjct: 243 RLRESLPYPYLVSSWEDLFGSFLSALK 269
>gi|323492535|ref|ZP_08097683.1| outer membrane-specific lipoprotein transporter subunit LolE
[Vibrio brasiliensis LMG 20546]
gi|323313322|gb|EGA66438.1| outer membrane-specific lipoprotein transporter subunit LolE
[Vibrio brasiliensis LMG 20546]
Length = 414
Score = 137 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 58/267 (21%), Positives = 104/267 (38%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS + + R+ + ++N +S S S IG+ +GV +I+ +S MNGF ++ RVL
Sbjct: 1 MFSSLSLFIGGRFSRAKQRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELNNRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + PL D+Q + + + P ++ P+V A S + VRG+
Sbjct: 61 SVISHGEFEGVRGPLSDWQEVVQQAEKHPKIVAAAPYVKLTALAEKG-SQLKAIEVRGVD 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ N + V +F + +I NL L +
Sbjct: 120 PQQEGKVSNLNAFIDSQVWQNFQPNQQQVILGQGVANLLNVDKGDYLTLMIPTSGATTKV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + + L++AQ Y L + VSG+ V V D +
Sbjct: 180 QAPKRVRVQVAGLLTLNGQIDHNLALIPLEDAQAYARLGDGVSGVSVRVTDVLQATQIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
L V + WQQ+Y + +
Sbjct: 240 EAGNTLDVYVYLRSWQQKYGFLYRDIQ 266
>gi|206564213|ref|YP_002234976.1| permease [Burkholderia cenocepacia J2315]
gi|198040253|emb|CAR56238.1| permease protein [Burkholderia cenocepacia J2315]
Length = 422
Score = 137 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 68/265 (25%), Positives = 119/265 (44%), Gaps = 4/265 (1%)
Query: 6 RFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
FE + RY R+ + F+S + + G+ +GV ALIVV+SVMNGFR ++ R+L
Sbjct: 9 PFEWQIGLRYARGGRRSAGDGFVSFIAGAAMAGIALGVAALIVVLSVMNGFRTEVRDRML 68
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ HV I + D++ A+ V V P+V QA ++ + L
Sbjct: 69 SVLAHVEIFSPSGAMPDWRLTAHESLQNTAVRAVAPYVDAQALLTNAGNVTGVALRGIDP 128
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + G + G+++G LA L + IGD+I +P
Sbjct: 129 VLEPRVSEIARKLKTGRLDALAPGEMGIVLGAALADALHVKIGDRITFFAPGNRARLGDA 188
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + + V+G F YD+ + Y+ +++AQ FN+ A +GI + V D +
Sbjct: 189 LPRFRQFNVVGTFESGHYQYDSALAYIHIRDAQQLFNVP-APTGIRLRVDDLQRAPEVAL 247
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSC 267
+ R L + + DW ++ + +F
Sbjct: 248 ALSRTLSGDLYIRDWTRQNRTWFEA 272
>gi|315499826|ref|YP_004088629.1| lipoprotein releasing system, transmembrane protein, lolc/e family
[Asticcacaulis excentricus CB 48]
gi|315417838|gb|ADU14478.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Asticcacaulis excentricus CB 48]
Length = 427
Score = 137 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 87/271 (32%), Positives = 137/271 (50%), Gaps = 6/271 (2%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS +E +A RYL + RK+ I++ + ISFIG+ + V LI+VMSVMNGFR++++ RVL
Sbjct: 10 FSAWETDLALRYLRTKRKDGGIALIAIISFIGITLAVGVLIIVMSVMNGFRDELMSRVLA 69
Query: 64 INGH-VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
NGH V + + RL IP VI+ P+V G S +RG+
Sbjct: 70 FNGHQFVAGEPLSDWNGRDAMLKRLRAIPGVIEASPYVESPGLAQGPFSQAGLAFMRGVD 129
Query: 123 ----NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
+ N S G ++IG+ LA + + +GD++ +LSP T
Sbjct: 130 VAALKNTPIIRDNIKSGSLDGFGAGEFGGDVILIGEGLASQMSVRVGDELTLLSP-SGST 188
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
G R K Y V G+F+ + D V+M LQ+AQL+F+ E+ +E+ VKDP I+
Sbjct: 189 AFGAMPRRKPYVVGGIFKSGVSELDAAFVFMPLQQAQLFFDREDEWDAVEIKVKDPYNIK 248
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + G+ V++DW +R ++ +
Sbjct: 249 DYYPAFRKASGDKAVLLDWTERNAPLWNALQ 279
>gi|313672099|ref|YP_004050210.1| hypothetical protein Calni_0133 [Calditerrivibrio nitroreducens DSM
19672]
gi|312938855|gb|ADR18047.1| protein of unknown function DUF214 [Calditerrivibrio nitroreducens
DSM 19672]
Length = 409
Score = 137 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 71/269 (26%), Positives = 133/269 (49%), Gaps = 4/269 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ E +A RY+ S ++ IS S I+ IG+++GV LIVV +V GF ++ ++LG
Sbjct: 1 MKIENFIALRYIKSKKETKAISFISVIAIIGILLGVATLIVVTNVFTGFENNLKDKILGA 60
Query: 65 NGHV-VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
N H+ V + + D+Q + N++ V+ V PFV Q ++G ++ +L I
Sbjct: 61 NSHIIVNRIDVGTISDWQKVENKIRETKGVVAVSPFVFSQVLLTGPANVSGVMLRGIIPE 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKG---VIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + G++ +++GKDLA LG+ + D++ +++P+G P
Sbjct: 121 KEAQAINIKQFITAGDLFKLKYDFDNKSGIVLGKDLALTLGVRLYDEVVMVAPFGKKGPF 180
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G + + + V+ +F DY+NG+ ++ ++ AQ +F+L + ++G V V + D +
Sbjct: 181 GFTPKMQKFYVVAIFDSGMYDYNNGLAFVDIKAAQKFFDLGDTITGFSVKVDNIDRASRI 240
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I L DW + FS E
Sbjct: 241 AKEIATKLDFPFWARDWLSMNKNLFSALE 269
>gi|330445697|ref|ZP_08309349.1| liporeleasing system, transmembrane protein LolE [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328489888|dbj|GAA03846.1| liporeleasing system, transmembrane protein LolE [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 415
Score = 137 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 58/267 (21%), Positives = 113/267 (42%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + R+ S ++N +S S S +G+ +GV +IV +S MNGF ++ RVL
Sbjct: 1 MFRPLSLYIGSRFNRSKKRNRMVSFISMSSMLGIAVGVAVIIVGLSAMNGFERELETRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H +Q PL D+Q + +++ PDV P+V A + + +
Sbjct: 61 SVIPHGELQAVEPPLNDWQPLVKQIEKHPDVTAAAPYVEFTALFEKGTKLKAVGVRGVNP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S K VI+G+ +A+ L + +GD + + P D +
Sbjct: 121 KEQLKVSELPRYVQNNAWSKFSAGKKEVILGQGVAQKLDLKVGDWVTAMIPNSDPEMNKL 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + + D+ + + L +AQ Y ++ + VSGI++ V ++ +
Sbjct: 181 RAPHRIRLQVAGILALGGEIDHKLAIVPLADAQKYMDMGSGVSGIQINVDKVLEAQRIVK 240
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L V + W Q+Y + +
Sbjct: 241 EVGNTLPVYVYLKSWTQQYGYMYRDIQ 267
>gi|325266690|ref|ZP_08133367.1| lipoprotein ABC superfamily ATP binding cassette transporter,
membrane protein [Kingella denitrificans ATCC 33394]
gi|324982133|gb|EGC17768.1| lipoprotein ABC superfamily ATP binding cassette transporter,
membrane protein [Kingella denitrificans ATCC 33394]
Length = 419
Score = 137 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 66/271 (24%), Positives = 135/271 (49%), Gaps = 5/271 (1%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ E + RYL + +++ F+S S +S +G+ +GV+ALIVV+SV+NGF++++ ++L
Sbjct: 1 MASLETWIGLRYLRAKKRSGFMSFISVMSIVGIALGVIALIVVLSVVNGFQKEIRGQLLN 60
Query: 64 INGH----VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
I H +I + +Q + + P+V+ PF++GQ ++ L
Sbjct: 61 IAPHAEVGYLIDSQNGTPATWQALQQKFAGKPEVLASAPFIAGQGLLANSGEVRGTQLRG 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + + + + G+ G+I+G+ LA LG + +K+ +++P G+VTP
Sbjct: 121 ILPDQERKVIDYADKMTAGSFDALKADEFGIILGESLAETLGAKVNEKVTVITPEGNVTP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
G+ R K +TV+G+ + F + D+ + + L +AQ + ++A + + + DP
Sbjct: 181 AGVVPRLKQFTVVGIVKTGFDEADSSLALIHLADAQKLYRTDDAAIALRLRLADPQNAPA 240
Query: 240 THENIV-RILGNGVVVIDWQQRYQIFFSCYE 269
E ++ + +W + +FS E
Sbjct: 241 VMERLLPAEQRKDLWTQNWTDNNRSYFSAVE 271
>gi|254429920|ref|ZP_05043627.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Alcanivorax sp. DG881]
gi|196196089|gb|EDX91048.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Alcanivorax sp. DG881]
Length = 403
Score = 137 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 66/259 (25%), Positives = 124/259 (47%), Gaps = 2/259 (0%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+ RY + +N+FIS+ + IS +G+M+GV LI V+SVMNGF ++ R+LG+ H +
Sbjct: 1 MGLRYTGARARNSFISVITLISALGLMLGVAVLITVLSVMNGFDRELQTRILGMVTH-LS 59
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
P+ D+Q +ANR+D ++ PFV + ++ + ++ +++
Sbjct: 60 VHGREPVQDWQALANRVDHHDEIQAAAPFVQLEGMLTHRGNVAGSLINGIEPDAERKVSI 119
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
G + + +++G LAR LG +GDK+ ++ P ++P G+ R K +T
Sbjct: 120 VGDFMHQGELESLEPGEFDMVLGYGLARRLGAELGDKVTLVLPEATISPAGVMPRFKRFT 179
Query: 191 VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN 250
V G+FR+R Y+++ +A V G+ + + D + + + LG
Sbjct: 180 VTGIFRVRAEVDSL-YAYVNVADAAKLARQAGTVQGVRLKLNDLFSASNLGWTLQQELGP 238
Query: 251 GVVVIDWQQRYQIFFSCYE 269
DW + + F +
Sbjct: 239 NYYTSDWTRSHGNLFQAIK 257
>gi|54298182|ref|YP_124551.1| hypothetical protein lpp2239 [Legionella pneumophila str. Paris]
gi|53751967|emb|CAH13391.1| hypothetical protein lpp2239 [Legionella pneumophila str. Paris]
Length = 415
Score = 137 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 78/269 (28%), Positives = 137/269 (50%), Gaps = 4/269 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY S +KN F+S S S +G+ +GVM LI V+SVMNGF +++ +R
Sbjct: 1 MYKPLALFIGLRYTRSRKKNHFVSFISLSSMLGIGMGVMVLITVLSVMNGFDQEIHRRFF 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ + I L D+ + +++ IP + + P+V Q ++ VL +
Sbjct: 61 GMAPEITITGPDERLSDWPEVVKKVETIPGIKAIAPYVGSQGLLTHEGQVLPIVLTGILP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S + GN D + G+I+GK LA +LG+ IGDK+ I+ P VTP GM
Sbjct: 121 EKEQSVTHLNKKLLAGN--MDNLKHFGIILGKGLADSLGVMIGDKVTIMIPQATVTPAGM 178
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGM-VYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKT 240
R K +TV+G+F + ++++++AQ ++ N VSGI++ + + +
Sbjct: 179 IPRFKRFTVVGVFSAGTGFNFDTKLAFINIEDAQKLMQMDKNDVSGIKMKINNVYKAPEL 238
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ +LG G V +W Q++ FF +
Sbjct: 239 SYELSDLLGEGYQVGNWTQQFGAFFEAVK 267
>gi|52842498|ref|YP_096297.1| lipoprotein ABC transporter [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52629609|gb|AAU28350.1| lipoprotein ABC transporter [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 451
Score = 137 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 79/269 (29%), Positives = 138/269 (51%), Gaps = 4/269 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY S +KN F+S S S +G+ +GVM LI V+SVMNGF +++ +R
Sbjct: 37 MYKPLALFIGLRYTRSRKKNHFVSFISLSSMLGIGMGVMVLITVLSVMNGFDQEIHRRFF 96
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ + I L D+ + +++ IP + + P+V Q ++ VL +
Sbjct: 97 GMAPEITITGPDERLSDWPEVVKKVETIPGIKAIAPYVGSQGLLTHEGQVLPIVLTGILP 156
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S + GN+SN G+I+GK LA +LG+ IGDK+ I+ P VTP GM
Sbjct: 157 EKEQSVTHLNKKLLAGNMSNLKH--FGIILGKGLADSLGVMIGDKVTIMIPQATVTPAGM 214
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGM-VYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKT 240
R K +TV+G+F + ++++++AQ ++ N VSGI++ + + +
Sbjct: 215 IPRFKRFTVVGVFSAGTGFNFDTKLAFINIEDAQKLMQMDKNDVSGIKMKINNVYKAPEL 274
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ +LG G V +W Q++ FF +
Sbjct: 275 SYELSDLLGEGYQVGNWTQQFGAFFEAVK 303
>gi|99081687|ref|YP_613841.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Ruegeria sp. TM1040]
gi|99037967|gb|ABF64579.1| Lipoprotein releasing system transmembrane protein LolC/E family
[Ruegeria sp. TM1040]
Length = 427
Score = 137 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 80/275 (29%), Positives = 129/275 (46%), Gaps = 11/275 (4%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FSRFE ++AWRYL + R +S+ ++IS IG+ + V ALI ++V +GFR + + +LG
Sbjct: 7 FSRFEWMIAWRYLRARRSEGGVSVMTWISLIGITLAVFALIATLAVRSGFRSEFVGTILG 66
Query: 64 INGHVVIQQK---------YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
N H + + DY +A + +P V++ P + GQ S
Sbjct: 67 ANAHATVYAHGTVTAAGTLDRRITDYAALAEAVGQVPGVLQAAPLIKGQVMASRGDRNAG 126
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ +++ ++ + G+ +G +AR LG+ IGDK+ ++SP
Sbjct: 127 VQVYGI--HAEDLAKIPGVAQSDVAYGDLGRFDDGIALGSGVARTLGLGIGDKVKLISPN 184
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G T G R +Y V+ +F D DN Y+ EAQ YFN E IEV V DP
Sbjct: 185 GVKTAFGTSPRVNAYEVVYVFTAGRYDIDNTRAYLPFAEAQSYFNREGVADEIEVMVADP 244
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+A+++ +++ G G V W+ F E
Sbjct: 245 EAVDQYVLPLLQAAGQGYGVWSWRDSSGGFLRALE 279
>gi|254480794|ref|ZP_05094041.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[marine gamma proteobacterium HTCC2148]
gi|214039377|gb|EEB80037.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[marine gamma proteobacterium HTCC2148]
Length = 420
Score = 137 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 67/266 (25%), Positives = 128/266 (48%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ + + RY FS ++N F S+ + +S +G+++GV +LI V+SVMNGF ++ R+L
Sbjct: 8 ITNYAAFIGLRYSFSRKRNRFTSVIALVSMLGMVLGVTSLITVLSVMNGFGGELRGRILS 67
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ H ++ + ++Q +A +++ + V+ V P++S + + + GVL
Sbjct: 68 LVPHGFVESPSGGISEWQPLAKKIESMESVLAVSPYISDKVIFANGRTLRGGVLTAIDPA 127
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + G++ + G V++G +AR L + +GDK+ + P VTP+G+
Sbjct: 128 MEARVSRIPEAMISGSLDSLAQPGFSVVLGASMARILRVRVGDKLEVTVPRLTVTPLGVF 187
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
RSK TV G+F + Y+SL Q V G+++ D + +T
Sbjct: 188 PRSKRLTVTGVFEVGAQPDTY-QAYISLPSGQKLLGPRTGVDGLQLKTVDLYSAPQTMLA 246
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V DW Q F +
Sbjct: 247 VAASIPANMKVKDWSQTQGSLFQAVK 272
>gi|218779632|ref|YP_002430950.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Desulfatibacillum alkenivorans AK-01]
gi|218761016|gb|ACL03482.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Desulfatibacillum alkenivorans AK-01]
Length = 415
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 74/273 (27%), Positives = 134/273 (49%), Gaps = 10/273 (3%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
FE+ + RYL + R+ AF S+ + +S GV +GV ALIVV++VM G + +R+LG
Sbjct: 3 FELFIGGRYLRAKRREAFASLITVLSLCGVGLGVTALIVVIAVMTGAEAHIKERILGSTP 62
Query: 67 HVVIQQKYYPLVDYQFIA--NRLDFIPDVIKVLPFVSGQAFVSGLSSG--------GSGV 116
HV++ +++ + +P V+ PF+ QA + +
Sbjct: 63 HVIVMPGGMAQGMGEYMEARKEILQVPGVLGAAPFIQSQAMIRSRRGASGALLRGVNPAL 122
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
D ++ R + +++ + G+I+GK++A NL + GD I+I+SP G
Sbjct: 123 SNEIFDLKDKVEPPGAWDRLVPDEASNPEGRPGIILGKEMASNLNVIPGDVISIISPSGT 182
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
++P+GM + V+G+F +YD+ + +M +++AQ + + + VSG+EV VKD
Sbjct: 183 LSPVGMMPTMQRLEVVGVFSGGMYEYDSTLAWMDMKQAQKFLRMGDTVSGMEVRVKDIYK 242
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ I LG DW + + F +
Sbjct: 243 ADRIASEITGALGPMFWATDWMRMNKNLFEALK 275
>gi|90413107|ref|ZP_01221104.1| putative ABC transporter, integral membrane protein [Photobacterium
profundum 3TCK]
gi|90325950|gb|EAS42396.1| putative ABC transporter, integral membrane protein [Photobacterium
profundum 3TCK]
Length = 414
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 58/267 (21%), Positives = 107/267 (40%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + R+ + ++N +S S S +G+ +GV +I+ +S MNGF ++ RVL
Sbjct: 1 MFRPLSLYIGSRFSRAKQRNRMVSFISISSILGIAVGVAVIIIGLSAMNGFERELQNRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H ++ PL ++Q I + P V P+VS A + S+ + +
Sbjct: 61 AVIPHGELEAVKAPLTEWQPILETVKKHPRVTGAAPYVSFTALLEKGSNLKAVAVRGVNP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ N K VI+G+ +A+ L I +GD I + P D
Sbjct: 121 EEEIQVSALPQYVKDNAWQNFSAGNKQVILGQGVAQKLQIGVGDWITAMIPNADSEKKLR 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + L +AQ Y ++ VSGI + V + +
Sbjct: 181 A-PHRIRLQVSGLLALGGQIDHNFAIIPLADAQQYLSMGEGVSGISLNVDNVLDAQSIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L V + W Q+Y + +
Sbjct: 240 EVGFTLPVYVYLKSWTQKYGYLYRDIQ 266
>gi|28897753|ref|NP_797358.1| outer membrane-specific lipoprotein transporter subunit LolE
[Vibrio parahaemolyticus RIMD 2210633]
gi|260363820|ref|ZP_05776575.1| lipoprotein releasing system, transmembrane protein LolE [Vibrio
parahaemolyticus K5030]
gi|260876920|ref|ZP_05889275.1| lipoprotein releasing system, transmembrane protein LolE [Vibrio
parahaemolyticus AN-5034]
gi|260897938|ref|ZP_05906434.1| lipoprotein releasing system, transmembrane protein LolE [Vibrio
parahaemolyticus Peru-466]
gi|260903473|ref|ZP_05911868.1| lipoprotein releasing system, transmembrane protein LolE [Vibrio
parahaemolyticus AQ4037]
gi|28805966|dbj|BAC59242.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|308085515|gb|EFO35210.1| lipoprotein releasing system, transmembrane protein LolE [Vibrio
parahaemolyticus Peru-466]
gi|308093865|gb|EFO43560.1| lipoprotein releasing system, transmembrane protein LolE [Vibrio
parahaemolyticus AN-5034]
gi|308110350|gb|EFO47890.1| lipoprotein releasing system, transmembrane protein LolE [Vibrio
parahaemolyticus AQ4037]
gi|308113899|gb|EFO51439.1| lipoprotein releasing system, transmembrane protein LolE [Vibrio
parahaemolyticus K5030]
Length = 414
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 52/267 (19%), Positives = 101/267 (37%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS +++ R+ + ++N +S S S IG+ +GV +I+ +S MNGF ++ RVL
Sbjct: 1 MFSSLALMIGGRFSRAKKRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQSRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H ++ PL +Y N+ V+ P+V S + VRG+
Sbjct: 61 SVIPHGELEGVNGPLQNYTKTMNQALQHEHVVAAAPYVRFTGLAEKG-SKLKAIEVRGVD 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + +F G+ +I N L +
Sbjct: 120 PAYEQAVSSMSDFIDPEAWQNFYSGQQQVILGRGVANELKVQVGDYVTLMIPQTGGTNKV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + F D+ + + L +AQ Y L + V+GI + D
Sbjct: 180 QAPKRVRVKVAGFLTLNGQIDHSLALVPLADAQQYVRLGDGVTGISLKTDDVLDAPSIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ ++ V + WQQ++ + +
Sbjct: 240 EVGNLVNVYVYLKSWQQQFGFLYRDIQ 266
>gi|328473269|gb|EGF44117.1| outer membrane-specific lipoprotein transporter subunit LolE
[Vibrio parahaemolyticus 10329]
Length = 414
Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 52/267 (19%), Positives = 101/267 (37%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS +++ R+ + ++N +S S S IG+ +GV +I+ +S MNGF ++ RVL
Sbjct: 1 MFSSLALMIGGRFSRAKKRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQSRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H ++ PL +Y N+ V+ P+V S + VRG+
Sbjct: 61 SVIPHGELEGVNGPLQNYTKTMNQALQHEHVVAAAPYVRFTGLAEKG-SKLKAIEVRGVD 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + +F G+ +I N L +
Sbjct: 120 PAYEQAVSSMSDFIDPEAWQNFYSGQQQVILGRGVANELKVQVGDYVTLMIPQTGGTNKV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + F D+ + + L +AQ Y L + V+GI + D
Sbjct: 180 QAPKRVRVKVAGFLTLNGQIDHSLALVPLADAQQYARLGDGVTGISLKTDDVLDAPSIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ ++ V + WQQ++ + +
Sbjct: 240 EVGNLVNVYVYLKSWQQQFGFLYRDIQ 266
>gi|294011728|ref|YP_003545188.1| ABC-type transport system permease component [Sphingobium japonicum
UT26S]
gi|292675058|dbj|BAI96576.1| ABC-type transport system permease component [Sphingobium japonicum
UT26S]
Length = 408
Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 82/259 (31%), Positives = 122/259 (47%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
++A RYL + FI + + IS + VM+GV ALI+VMSVMNGFR ++ +++G+NGH V
Sbjct: 1 MIARRYLLPGKGEGFIFLVAGISLVAVMLGVAALIIVMSVMNGFRAELFDKIVGLNGHAV 60
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+Q L D++ + P V P + S + ++ N +
Sbjct: 61 VQGYGGRLPDWKAVLKEAKATPGVTSATPLIEQPLLGSFQGRVEAVLVRGMTVNDIRNNA 120
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
GN+ G V IG LA NLGI +GD + I++P G TP G R SY
Sbjct: 121 TLKAKVVAGNLGALTPNGGKVAIGSRLAENLGIQLGDSLTIINPAGRSTPFGTVPRQVSY 180
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
V +F + DYD V M +++AQ L + VS IEV + D + E + +
Sbjct: 181 QVAAIFEVGIYDYDKAFVVMPVEDAQTLLLLGDVVSMIEVETINADQVSAILEPLAGKVA 240
Query: 250 NGVVVIDWQQRYQIFFSCY 268
+V DW+Q F
Sbjct: 241 GRAIVTDWRQMNASLFEAL 259
>gi|84501595|ref|ZP_00999767.1| ABC lipoprotein efflux transporter, inner membrane subunit, LolE
[Oceanicola batsensis HTCC2597]
gi|84390216|gb|EAQ02775.1| ABC lipoprotein efflux transporter, inner membrane subunit, LolE
[Oceanicola batsensis HTCC2597]
Length = 429
Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 84/274 (30%), Positives = 135/274 (49%), Gaps = 10/274 (3%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE ++AWRYL + R +S+ ++IS IG+ + V ALI+ ++V GFR + + +LG
Sbjct: 8 FAPFEWMIAWRYLRARRAEGGVSVMTWISLIGIALAVAALIITLAVRAGFRAEFVDTILG 67
Query: 64 INGHVVIQQKYYPLVDYQF---------IANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
N HV + P + +A R+ +P V + P V GQ S + G S
Sbjct: 68 ANAHVTVYNSGQPNEAGRLDRTIADYAGMAERIVAVPGVTRAAPLVKGQVMAS-ANGGTS 126
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
GV V GI+ +D + + + G+ + +G +AR+L +++GD++ ++SP
Sbjct: 127 GVEVFGIAAADLATIPRVANPETAQGDLSRFGGEAIAMGSGVARSLNLTVGDRVKLISPD 186
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G T G R K+Y + +F D D VYM EAQ YFN E IEV V+ P
Sbjct: 187 GVKTAFGTSPRVKTYEIAYLFTAGRYDIDQTRVYMPFDEAQSYFNREGVADEIEVMVERP 246
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ ++ I+R G+ +V W+ F
Sbjct: 247 EQVDAQVFEILRAAGDRALVWTWRDSAGSFLRAL 280
>gi|54295131|ref|YP_127546.1| hypothetical protein lpl2211 [Legionella pneumophila str. Lens]
gi|53754963|emb|CAH16451.1| hypothetical protein lpl2211 [Legionella pneumophila str. Lens]
Length = 415
Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 78/269 (28%), Positives = 136/269 (50%), Gaps = 4/269 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY S +KN F+S S S +G+ +GVM LI V+SVMNGF +++ +R
Sbjct: 1 MYKPLALFIGLRYTRSRKKNHFVSFISLSSMLGIGMGVMVLITVLSVMNGFDQEIHRRFF 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ + I L D+ + +++ IP + + P+V Q ++ VL +
Sbjct: 61 GMAPEITITGPDERLSDWPEVVKKVETIPGIKAIAPYVGSQGLLTHEGQVLPIVLTGILP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S + GN D + G+I+GK LA +LG+ IGDK+ I+ P VTP GM
Sbjct: 121 EKEESVTHLNKKLLAGN--MDNLKHFGIILGKGLADSLGVMIGDKVTIMIPQATVTPAGM 178
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGM-VYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKT 240
R K +TV G+F + ++++++AQ ++ N VSGI++ + + +
Sbjct: 179 IPRFKRFTVAGVFSAGTGFNFDTKLAFINIEDAQKLMQMDKNDVSGIKMKINNVYKAPEL 238
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ +LG G V +W Q++ FF +
Sbjct: 239 SYELSDLLGEGYQVGNWTQQFGAFFEAVK 267
>gi|67458603|ref|YP_246227.1| lipoprotein releasing system, transmembrane protein [Rickettsia
felis URRWXCal2]
gi|67004136|gb|AAY61062.1| Lipoprotein releasing system, transmembrane protein [Rickettsia
felis URRWXCal2]
Length = 415
Score = 136 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 93/264 (35%), Positives = 137/264 (51%), Gaps = 1/264 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ F +A+RY + + F+SI S S +GVMIGV ALIVVMSVMNGF ++ K ++G+
Sbjct: 4 NNFIFKIAFRYFRAKKNEKFVSIISAFSLVGVMIGVAALIVVMSVMNGFHIELTKNIIGL 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
NG +VI ++ + +Y+ I +L V V GQA S SGVLV+G+
Sbjct: 64 NGDIVINRQGGSIDNYEEIKAKLLKQDYVKHVTFIAHGQALAL-GKSNNSGVLVKGMKLK 122
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
D S F +DF + +G+ LA NLG++IGDKI ++SP T +G
Sbjct: 123 DLSLRNEIFKNVNFGSFDDFHGKNVIALGEQLASNLGVTIGDKIRLISPNSVSTALGSMP 182
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
RSK + ++ +F DYD + M L AQ + +L + ++ IE+ DPD I
Sbjct: 183 RSKEFKIIAIFNSGMYDYDLTTILMPLTAAQNFLSLGDDINLIEINSLDPDKALAYSYKI 242
Query: 245 VRILGNGVVVIDWQQRYQIFFSCY 268
+LG + V +WQ F S
Sbjct: 243 QSLLGPNLYVFNWQTLNSQFLSAL 266
>gi|127512561|ref|YP_001093758.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Shewanella loihica PV-4]
gi|126637856|gb|ABO23499.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella loihica PV-4]
Length = 410
Score = 136 bits (341), Expect = 4e-30, Method: Composition-based stats.
Identities = 62/271 (22%), Positives = 116/271 (42%), Gaps = 5/271 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +RY + + N F S + + G+++GV ALI+V SVMNG + +R+L
Sbjct: 1 MNLALSWTIGYRYWRARKANPFASFITLFAVSGILLGVAALIIVSSVMNGLEGQLKQRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G + + + + +Q +AN L ++ + P V+ QA + S+ + +
Sbjct: 61 GAVPQLTVHCEQHLGH-WQDVANTLIDGKQILAMSPSVATQAMLQSPSNISAVQVYGIYP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ L F G++ + +IIG +LAR L + GDKI +LS G V
Sbjct: 120 ELEKDNLSRLNRHFNGSLDSLEAGKYRIIIGAELARRLDVKPGDKIRVLSGDGVVYSPLG 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
+ S+ ++ D + Y+ ++A N + + +++ DP K
Sbjct: 180 PVPSQRKFIVAGVFEMGSQVDASLAYVHHEDALRLMRKSPNEIKSLRLYLADPFKASKLA 239
Query: 242 ENIVRIL---GNGVVVIDWQQRYQIFFSCYE 269
+ G+ V DW++ Y FS +
Sbjct: 240 SKVKAAFEAAGDSVTTSDWRENYGHLFSAVK 270
>gi|90021454|ref|YP_527281.1| lipoprotein releasing system transmembrane protein LolE
[Saccharophagus degradans 2-40]
gi|89951054|gb|ABD81069.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Saccharophagus degradans 2-40]
Length = 414
Score = 136 bits (341), Expect = 4e-30, Method: Composition-based stats.
Identities = 64/267 (23%), Positives = 128/267 (47%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + RY+ + R+N FI+ S+ + +G+ +GV A+IVV+SVMNGF ++ +R+L
Sbjct: 1 MSKTLPFHIGLRYVRAKRRNGFIAFVSWFALLGMALGVFAIIVVLSVMNGFDRELKERIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + PL ++ ++ ++ P ++ P++ G VS +
Sbjct: 61 RVVPHGFL-TTEKPLTQWRALSEQIQHQPHLLASAPYIDGTGLVSYGGGVRPVEIQGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + G +S+ +++G +ARNLG++IGD + + P +TP G+
Sbjct: 120 DYERNISLVDDFMLVGALSDLQAGEYQIVLGNLIARNLGLAIGDTVAVTLPQVSITPAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
RSK +T++G+F + D + + + +A+ F + ++V+G+ + D +
Sbjct: 180 FPRSKRFTLIGVFEVGAQV-DQSLALIHIDDAKKLFRMGDSVAGLHLKYDDIYSAPAEIS 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ LG G DW Q F +
Sbjct: 239 KLKASLGEGYTTKDWSQTQGSLFQAVK 265
>gi|157964849|ref|YP_001499673.1| lipoprotein releasing system, transmembrane protein, LolC/E family
protein [Rickettsia massiliae MTU5]
gi|157844625|gb|ABV85126.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
protein [Rickettsia massiliae MTU5]
Length = 451
Score = 136 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 93/264 (35%), Positives = 136/264 (51%), Gaps = 1/264 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ F +A+RY + + F+SI S S +GVMIGV ALIVVMSVMNGF ++ K ++G+
Sbjct: 40 NNFIFKIAFRYFRAKKNEKFVSIISAFSLVGVMIGVAALIVVMSVMNGFHIELTKNIIGL 99
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
NG +VI ++ + +Y+ I +L V V GQA S SGVLV+G+
Sbjct: 100 NGDIVINRQGGSIDNYEEIKAKLLKQDYVKHVTFIAHGQALAL-GKSNNSGVLVKGMKLK 158
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
D S F ++F + +G+ LA NLGI++GDKI ++SP T G
Sbjct: 159 DLSVRNEIFKNVNFGSFDNFHGKNVIALGEQLASNLGITVGDKIRLISPNAVSTAFGSMP 218
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
RSK + V+ +F DYD + M L AQ + +L + ++ IE+ DPD I
Sbjct: 219 RSKEFKVIAIFNSGMYDYDLTTILMPLTAAQNFLSLGDDINLIEINSLDPDKALAYSYKI 278
Query: 245 VRILGNGVVVIDWQQRYQIFFSCY 268
+LG + V +WQ F S
Sbjct: 279 QSLLGPTLYVFNWQTLNSQFLSAL 302
>gi|189218221|ref|YP_001938863.1| ABC-type transport system, involved in lipoprotein release,
permease component [Methylacidiphilum infernorum V4]
gi|189185079|gb|ACD82264.1| ABC-type transport system, involved in lipoprotein release,
permease component [Methylacidiphilum infernorum V4]
Length = 416
Score = 136 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 72/273 (26%), Positives = 123/273 (45%), Gaps = 13/273 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ F + +A RYL R +F+S+ +F+S +GV +GV L++V+SVM GF ++ K+++
Sbjct: 1 MQLPFSLFLALRYLRPRR--SFVSVITFLSILGVSLGVAVLVIVLSVMAGFSHELEKKII 58
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G N H+VI FIA L + + +S + ++RGI+
Sbjct: 59 GFNAHLVISNGEILHRPQNFIA--LAEKDPFVVGAAPFVSGPVMVEYASRITTPILRGIN 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G+ VI+G++ A++ +GDK+ I +P
Sbjct: 117 LDMEEKVIPIKKFLIAGSYDL--EGESVIVGEEWAKHTDAYLGDKVLIYAPRHFQAFRDN 174
Query: 183 GIRSKS-------YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD 235
+ K +T+ G+FR +YD+ SL AQ ++L N V GI + +KDP
Sbjct: 175 FQKGKQTTILPSEFTITGIFRTGLYEYDSSYFITSLANAQYLYSLGNGVHGISIRIKDPL 234
Query: 236 AIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
A K E + L V + W + + FS
Sbjct: 235 AASKVKERLNLQLQPPVEALTWIDQNRPLFSAI 267
>gi|254508522|ref|ZP_05120640.1| lipoprotein releasing system, transmembrane protein LolE [Vibrio
parahaemolyticus 16]
gi|219548547|gb|EED25554.1| lipoprotein releasing system, transmembrane protein LolE [Vibrio
parahaemolyticus 16]
Length = 414
Score = 136 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 59/267 (22%), Positives = 105/267 (39%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS + + R+ + ++N +S S S IG+ +GV +I+ +S MNGF ++ RVL
Sbjct: 1 MFSSLSLFIGGRFSRAKQRNKMVSFISLSSTIGITVGVAVIIIGLSAMNGFERELKDRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + P+ +++ + + P V PFV A + VRG+
Sbjct: 61 SVISHGEFEGVRGPIQEWKSVIQQSQLHPKVEAAAPFVKLTALAEKG-QQLKAIEVRGVD 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S + N +V F GK +I +L L +
Sbjct: 120 PKLESKVSNLSHYIDSDVWQQFTPGKKQVILGKGIADLLNVNVGDFLTLMIPTSGATTKV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + + L++AQLY L +AVSG+ + V D +
Sbjct: 180 QAPKRVRVQVAGLLTLNGQIDHSLALVPLEDAQLYAKLGSAVSGVALKVTDVLDATQIIR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L V + WQQ+Y + +
Sbjct: 240 EVGNTLDEYVYLRSWQQKYGFLYRDIQ 266
>gi|119774469|ref|YP_927209.1| lipoprotein releasing system transmembrane protein LolE [Shewanella
amazonensis SB2B]
gi|119766969|gb|ABL99539.1| lipoprotein releasing system transmembrane protein LolE [Shewanella
amazonensis SB2B]
Length = 411
Score = 136 bits (340), Expect = 5e-30, Method: Composition-based stats.
Identities = 64/271 (23%), Positives = 119/271 (43%), Gaps = 4/271 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS ++ +RY + + NAF S + + G+ +GV ALIVV SVMNG + R+L
Sbjct: 1 MFSSSAFLIGYRYWRARKANAFASFITLFAVSGIFLGVAALIVVSSVMNGLEGQLKTRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G VV+++ Q +P ++ V P QA + S+ G+ L +
Sbjct: 61 GAVPQVVVEKNDGFADWRQTADQLQATLPGIVGVSPSTGTQAMLQSSSNIGAVQLSGILP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + + + + +I+G LA L +++GD I +LS G V
Sbjct: 121 EVESALASRTTTVYSPAFDSLISGEYRIILGVQLASELDVAVGDTIRVLSGEGVVFSPLG 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
+ S+ ++ D + ++ +A+ + V G+ +++ DP E T
Sbjct: 181 PVPSQRKFIVSGLFQMGSQVDAQLAFIHYDDARRLMRKAPDKVDGLRLYLDDPFEAEATG 240
Query: 242 ENIVRIL---GNGVVVIDWQQRYQIFFSCYE 269
+ + +IL G+ + V DW+ Y F +
Sbjct: 241 KAVPQILAAEGDTLNVHDWRDGYGHLFGAVK 271
>gi|94987468|ref|YP_595401.1| ABC-type transport system, involved in lipoprotein release,
permease component [Lawsonia intracellularis PHE/MN1-00]
gi|94731717|emb|CAJ55080.1| ABC-type transport system, involved in lipoprotein release,
permease component [Lawsonia intracellularis PHE/MN1-00]
Length = 427
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 74/287 (25%), Positives = 123/287 (42%), Gaps = 22/287 (7%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+FE+ +A YLF+ RK AFI + S +S +GV IGV +L+VV+ V NGF D+ ++LG
Sbjct: 1 MKFELFIALHYLFARRKQAFIYLISLMSILGVAIGVASLVVVLGVYNGFTIDIRDKILGA 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N H++I + ++ +L + + + + + G + + S
Sbjct: 61 NAHIIITGNFDSPIEEPTSFTQLSTTSMLSQNALIILNKLQQTSAIIGATPFIYAECMIS 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGK---------------------GVIIGKDLARNLGIS 163
++ R S G+IIG +LA+ L ++
Sbjct: 121 SPHGVKGLILRGIDPSSAQNVISMLSHLTKGNLEDLIPKVLGTPDGIIIGNELAQRLNVT 180
Query: 164 IGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-N 222
IG ++N+LSP G T G R + V G+F +YD + + SL A+ L N
Sbjct: 181 IGSRVNLLSPTGQKTSSGFQPRIRPLIVTGIFHTGMFEYDTSLAFTSLNAARELLGLPHN 240
Query: 223 AVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+SGIEV + D + + LG+ V W F+ +
Sbjct: 241 YISGIEVSIHDVYQANYITNQLQQELGHNFSVRSWMDMNANLFAALK 287
>gi|319942336|ref|ZP_08016651.1| LolC/E family Lipoprotein releasing system [Sutterella
wadsworthensis 3_1_45B]
gi|319804209|gb|EFW01109.1| LolC/E family Lipoprotein releasing system [Sutterella
wadsworthensis 3_1_45B]
Length = 435
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 77/272 (28%), Positives = 135/272 (49%), Gaps = 5/272 (1%)
Query: 2 SIFSRFEVIVAWRYLFSNR----KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDM 57
++ + FE ++ Y R K+ F+S S +S + +GV ALI+V+SVMNGF++++
Sbjct: 17 TMQTPFEFMIGLTYTRRGRRGRRKDGFMSFISGMSVASIALGVAALIIVLSVMNGFQKEV 76
Query: 58 IKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVL 117
R+L + HV I+ L D + + L DV+ V PFV GQ S + V+
Sbjct: 77 RDRMLSVIPHVEIRASKGALTDVEGVEKVLQAQSDVVAVAPFVEGQGLFSSGAVVRGAVV 136
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
+ + + S +S+ + VI+G+ LAR L + IGDK+ +L P G++
Sbjct: 137 KGIDPAKEPGVSELAQSVSGAELSDLKPKAFQVILGQALARQLRVHIGDKVALLVPEGNM 196
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
TP G+ R K TV G F +YD+ +++++A + G+ V D D
Sbjct: 197 TPAGLIPRMKQLTVAGYFSSGHYEYDSTYALVNIEDAAALYRTGGP-QGLRVKTTDMDRA 255
Query: 238 EKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ +V +L +G+ DW ++ + +F+ +
Sbjct: 256 PQIAAKLVSVLPSGLYATDWSRQNRTWFAAVQ 287
>gi|323496027|ref|ZP_08101090.1| outer membrane-specific lipoprotein transporter subunit LolE
[Vibrio sinaloensis DSM 21326]
gi|323318918|gb|EGA71866.1| outer membrane-specific lipoprotein transporter subunit LolE
[Vibrio sinaloensis DSM 21326]
Length = 414
Score = 135 bits (339), Expect = 6e-30, Method: Composition-based stats.
Identities = 57/267 (21%), Positives = 104/267 (38%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS + + R+ + ++N +S S S IG+ +GV +I+ +S MNGF ++ RVL
Sbjct: 1 MFSSLSLFIGGRFSRAKQRNKMVSFISLSSTIGITVGVAVIIIGLSAMNGFERELKDRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + P+ ++Q + N+ + P + PFV A + VRG+
Sbjct: 61 SVISHGEFEGVRGPIEEWQSVVNQAEKHPKIEAAAPFVKLTALAEKG-QQLKAIEVRGVD 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + N V F+ G +I NL L + +
Sbjct: 120 PEQETRVSNLSQYIDPMVWQQFEPGNKQVILGQGVANLLGVDVGDYLTLMIPTAGSTTKV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + + L +AQ Y L + VSG+ + V D +
Sbjct: 180 QAPKRVRVQVAGLLTLNGQIDHNLALVPLADAQQYAKLGSGVSGVALKVTDVLNATQIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L V + WQQ+Y + +
Sbjct: 240 EVGNTLDVYVYLRSWQQKYGFLYRDIQ 266
>gi|127512563|ref|YP_001093760.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Shewanella loihica PV-4]
gi|126637858|gb|ABO23501.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella loihica PV-4]
Length = 417
Score = 135 bits (339), Expect = 6e-30, Method: Composition-based stats.
Identities = 63/269 (23%), Positives = 107/269 (39%), Gaps = 2/269 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ R V WR+ + + N FIS SF S G+ +GV LI V+S MNGF +++ +R+L
Sbjct: 1 MRERLAFWVGWRFYMARQSNRFISFISFASTAGIALGVAVLITVLSAMNGFEKELEQRLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H + PL D+ IA IP + PFV Q + ++
Sbjct: 61 GVVPHGELTGVNEPLHDWPKIAEDAKKIPGINASAPFVRIQGLIQKPGGFQGLTVIGITP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY--GDVTPM 180
+ + +++GK LA LG+S+G+ +++ +P T
Sbjct: 121 ELEAKVSNIRDFMPDAAWQALASKENNIVLGKGLADALGLSLGNTLSLYTPNLASQSTGR 180
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G+G + + D Y+SL L + VSGI + V D A +
Sbjct: 181 GLGSAKSHQFKVAGIFALGGELDLTTAYISLDYGAELLGLGDGVSGIRIKVDDVFAAPQL 240
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + DW + + +
Sbjct: 241 IRTLGYSQSQYMYLSDWTRTQGHLYQDIQ 269
>gi|153835242|ref|ZP_01987909.1| lipoprotein releasing system, transmembrane protein LolE [Vibrio
harveyi HY01]
gi|148868280|gb|EDL67414.1| lipoprotein releasing system, transmembrane protein LolE [Vibrio
harveyi HY01]
Length = 414
Score = 135 bits (339), Expect = 6e-30, Method: Composition-based stats.
Identities = 52/267 (19%), Positives = 103/267 (38%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS +++ R+ + ++N +S S S IG+ +GV +I+ +S MNGF ++ RVL
Sbjct: 1 MFSSLALMIGGRFSRAKKRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQSRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H ++ PL +Y N+ V+ P+V S + VRG+
Sbjct: 61 SVIPHGELEGVNGPLHNYTKTMNQALSHEHVVAAAPYVRFTGLAEKG-SKLKAIEVRGVD 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + +F G+ +I N L + +
Sbjct: 120 PAFEQAVSSMSEFIDPKAWQNFYAGQQQVILGRGVANELNVDVGDYITLMIPQTGSTNKV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + F D+ + + L++AQ Y L + V+GI + D
Sbjct: 180 QAPKRVRVKVAGFLTLNGQIDHSLALVPLKDAQAYARLGDGVTGISLKTDDVLNAPSIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ ++ V + WQQ++ + +
Sbjct: 240 EVGNLIDVYVYLKSWQQQFGFLYRDIQ 266
>gi|54309555|ref|YP_130575.1| outer membrane-specific lipoprotein transporter subunit LolE
[Photobacterium profundum SS9]
gi|46913991|emb|CAG20773.1| putative ABC transporter, integral membrane protein [Photobacterium
profundum SS9]
Length = 414
Score = 135 bits (339), Expect = 6e-30, Method: Composition-based stats.
Identities = 55/267 (20%), Positives = 106/267 (39%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + R+ + ++N +S S S +G+ +GV +I+ +S MNGF ++ R+L
Sbjct: 1 MFRPLSLYIGSRFSRAKQRNRMVSFISISSILGIAVGVAVIIIGLSAMNGFERELQNRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H ++ PL ++Q I + P V P+VS A + S+ + +
Sbjct: 61 AVIPHGELEAVKVPLTEWQPILETVKKHPRVTGAAPYVSFTALLEKGSNLKAVAVRGVNP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ K +I+G+ +A+ L I +GD I + P D
Sbjct: 121 EEEIQVSALPQYVKDNAWQRFSAGNKQIILGQGVAQKLQIGVGDWITAMIPNADSEKKLR 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + L +AQ Y ++ VSGI + V + +
Sbjct: 181 S-PHRIRLQVSGLLALGGQIDHNFAIIPLADAQQYLSMGEGVSGISLNVDNVLDAQSIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L V + W Q+Y + +
Sbjct: 240 EVGFTLPVYVYLKSWTQKYGYLYRDIQ 266
>gi|148555261|ref|YP_001262843.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Sphingomonas wittichii RW1]
gi|148500451|gb|ABQ68705.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Sphingomonas wittichii RW1]
Length = 416
Score = 135 bits (338), Expect = 7e-30, Method: Composition-based stats.
Identities = 80/266 (30%), Positives = 123/266 (46%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +R+E ++A RYL R AFI + + IS + V +GV ALIVVMSVMNGFR ++ +++
Sbjct: 2 LLNRYERMIAKRYLLPGRGEAFIFLVASISLVAVALGVAALIVVMSVMNGFRAELFDKIV 61
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+NGH V+Q L D++ IA +P V+ P + S ++
Sbjct: 62 GLNGHAVVQGYDGKLGDWRRIAADARKLPGVVSATPLIEQPLMASFGGRVEGVLVRGMTL 121
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
G++ V IG LA LG +G +I+++SP G TP G
Sbjct: 122 EDIRRNPVIQGKVVRGSLDALTPGSDRVAIGARLAEQLGADLGSQISLISPQGQTTPFGT 181
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R SY V +F + DYD V M + +AQ L++AV IE+ D D + +
Sbjct: 182 VPRIVSYQVAAIFEVGVYDYDKAFVVMPMSDAQTLLMLDDAVGMIEIQTVDADRVGEILA 241
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + + DW+ F
Sbjct: 242 PLKPRIAMQGEIRDWRALNSSLFEAL 267
>gi|103486663|ref|YP_616224.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Sphingopyxis alaskensis RB2256]
gi|98976740|gb|ABF52891.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Sphingopyxis alaskensis RB2256]
Length = 416
Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats.
Identities = 77/266 (28%), Positives = 124/266 (46%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
I +E + RY+ R FI +A+ SF+ V +GV AL+VVMSVMNG R D+ +++
Sbjct: 2 ILRPYERTIFKRYMLPQRGEGFIFVAAAFSFVAVTLGVAALVVVMSVMNGVRSDLFDKIV 61
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+NGH V+Q L D++ + + P V P + + + ++
Sbjct: 62 GLNGHAVVQGFGGRLDDWRDVLKQAKATPGVTSATPLIEQPLLTTFGGRVEAVLVRGMTV 121
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S G++++ V IG +LARNLG ++G I I++P G TP G
Sbjct: 122 PDIRSNAVLGGKVLQGSLNSLTAGSGNVAIGSELARNLGATVGSNITIINPQGRSTPFGT 181
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R Y V +F + D+D V M +++AQL + + IE+ +DPD + + +
Sbjct: 182 VPREIGYRVSAVFEIGVYDFDKAYVVMPMEDAQLLLLSGDQIGMIEIKTEDPDRVGEILQ 241
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L VV DW+ F
Sbjct: 242 PLAEKLAAQAVVSDWRSMNASLFEAL 267
>gi|87199782|ref|YP_497039.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Novosphingobium aromaticivorans DSM 12444]
gi|87135463|gb|ABD26205.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Novosphingobium aromaticivorans DSM 12444]
Length = 413
Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats.
Identities = 88/266 (33%), Positives = 133/266 (50%), Gaps = 3/266 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
I S FE +A RY+ R AFI++ + IS + VM+GV AL++VMSVMNGFR +++ +++
Sbjct: 2 ILSPFEWTIAKRYMLPGRGEAFIALVAGISLVAVMLGVAALVIVMSVMNGFRAELLDKIV 61
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+NGH +IQ L ++Q I R+ PDV P + Q ++ + +LVRG +
Sbjct: 62 GLNGHAIIQAYGGRLDNWQDILKRVQQTPDVTHASPLI-EQPLLASFNGRVEAILVRGNT 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
D L++ + V +G LA NLG +GD I I++P G TP G
Sbjct: 121 AEDIKRLEDKRVDGVIG--SLRPGSGNVALGSRLAENLGARVGDSITIINPQGRSTPFGT 178
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R +YTV +F + DYD V M + +AQ + + IEV + D + T
Sbjct: 179 VPREIAYTVSAIFEVGVYDYDQAYVVMPISDAQTLLLTGDTIGMIEVTTTNADTVMDTLG 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + L VV DW+ F
Sbjct: 239 PLKKELEGQAVVTDWKTINASLFEAL 264
>gi|153837340|ref|ZP_01990007.1| lipoprotein releasing system, transmembrane protein LolE [Vibrio
parahaemolyticus AQ3810]
gi|149749371|gb|EDM60144.1| lipoprotein releasing system, transmembrane protein LolE [Vibrio
parahaemolyticus AQ3810]
Length = 414
Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats.
Identities = 52/267 (19%), Positives = 101/267 (37%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS +++ R+ + ++N +S S S IG+ +GV +I+ +S MNGF ++ RVL
Sbjct: 1 MFSSLALMIGGRFSRAKKRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQSRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H ++ PL +Y N+ V+ P+V S + VRG+
Sbjct: 61 SVIPHGELEGVNGPLQNYTKTMNQALQHEHVVAAAPYVRFTGLAEKG-SKLKAIEVRGVD 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + +F G+ +I N L +
Sbjct: 120 PAYEQAVSSMSDFIDPEAWQNFYSGQQQVILGRGVANELKVQVGDYVTLMIPQAGGTNKV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + F D+ + + L +AQ Y L + V+GI + D
Sbjct: 180 QAPKRVRVKVAGFLTLNGQIDHSLALVPLADAQQYARLGDGVTGISLKTDDVLDAPSIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ ++ V + WQQ++ + +
Sbjct: 240 EVGNLVNVYVYLKSWQQQFGFLYRDIQ 266
>gi|157828923|ref|YP_001495165.1| hypothetical protein A1G_05965 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933648|ref|YP_001650437.1| lipoprotein releasing system transmembrane protein [Rickettsia
rickettsii str. Iowa]
gi|157801404|gb|ABV76657.1| hypothetical protein A1G_05965 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165908735|gb|ABY73031.1| lipoprotein releasing system transmembrane protein [Rickettsia
rickettsii str. Iowa]
Length = 451
Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats.
Identities = 92/264 (34%), Positives = 136/264 (51%), Gaps = 1/264 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ F +A+RY + + F+SI S S +GVMIGV ALIVVMSVMNGF ++ K ++G+
Sbjct: 40 NNFIFKIAFRYFRAKKNEKFVSIISAFSLVGVMIGVAALIVVMSVMNGFHIELTKNIIGL 99
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
NG +VI ++ + +Y+ I +L + V GQA S SGVLV+G+
Sbjct: 100 NGDIVINRQGGSIDNYEEIKAKLLKQDYIKHVTFIAHGQALAL-GKSNNSGVLVKGMKLK 158
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
D S F ++F + +G+ LA NLG+++GDKI ++SP T G
Sbjct: 159 DLSVRNEIFKNVNFGSFDNFHGKNVIALGEQLASNLGVTVGDKIRLISPNSVSTTFGSMP 218
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
RSK + V+ +F DYD + M L AQ + +L N ++ IE+ DPD I
Sbjct: 219 RSKEFKVIAIFNSGMYDYDLTTILMPLTAAQNFLSLGNDINLIEINSLDPDKALTYSHKI 278
Query: 245 VRILGNGVVVIDWQQRYQIFFSCY 268
+LG + V +WQ F S
Sbjct: 279 QSLLGPTLYVFNWQTLNSQFLSAL 302
>gi|197105247|ref|YP_002130624.1| ABC-type transport system, involved in lipoprotein release,
permease component [Phenylobacterium zucineum HLK1]
gi|196478667|gb|ACG78195.1| ABC-type transport system, involved in lipoprotein release,
permease component [Phenylobacterium zucineum HLK1]
Length = 431
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 84/269 (31%), Positives = 130/269 (48%), Gaps = 3/269 (1%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F +E ++A RYL + R +++ S ISFIG+++ V LI+VMSVMNGFR +M+ R+LG
Sbjct: 15 FGYWERMLAGRYLRAKRSQGGVALISVISFIGILLAVAVLIIVMSVMNGFRSEMLTRILG 74
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
GH+ + D + RL +P V + V QA G + ++
Sbjct: 75 FQGHLYVTGGVLDGPDREAAVQRLRQVPRVTQAASIVEAQAIALGPTQITGAIVRGISPA 134
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKG---VIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ S + G++ G ++IG+ LA++LG++ GD + ++SP G T
Sbjct: 135 DLKATRLVSANVTQGSLEEFGVGEYGGETIVIGERLAQSLGVAPGDVLTLISPSGGATAF 194
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G K Y V F + YD V+M ++AQL+F E IEV V DPD +
Sbjct: 195 GGTPMQKDYVVGATFSVGMSQYDQAYVFMPFEQAQLFFGREGTADAIEVRVDDPDQAARM 254
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
I + G +V DW QR F+ +
Sbjct: 255 KAAIAQAAGPAAIVTDWTQRDSSFWGALK 283
>gi|296283772|ref|ZP_06861770.1| ABC-type transport system [Citromicrobium bathyomarinum JL354]
Length = 413
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 72/268 (26%), Positives = 124/268 (46%), Gaps = 4/268 (1%)
Query: 3 IF-SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+F + FE +A RYL+ + FI + + IS VM+ V L++VMSVMNGFR +++ ++
Sbjct: 1 MFLNPFEWTIAKRYLWPGKGEGFIKLVAGISIGVVMLSVAMLVIVMSVMNGFRAELLDKI 60
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+G+NGH ++Q L D++ + + V+ P + V+ + ++
Sbjct: 61 VGLNGHAIVQAYGGRLDDWKSVLADIRESEGVVSASPLIEQPLLVTFDGRVEAVLVRGNT 120
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ + G+++ V IG LA N+G +GD I +++P G TP G
Sbjct: 121 QEDIDALQDKTLM---GSMAEIKPGADKVAIGSRLAENIGARVGDVITVINPAGRSTPFG 177
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
R Y V +F + DYD + M + +AQ + + IEV +D D + +
Sbjct: 178 TVPRQVGYEVGAIFEVGLYDYDGAFIIMPIPQAQTLLLTGDTIGMIEVTTEDADRVTEIM 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
I + L +V WQQ F +
Sbjct: 238 APIEQRLQGIAIVRTWQQINSSIFEALQ 265
>gi|238651015|ref|YP_002916871.1| lipoprotein releasing system transmembrane protein [Rickettsia
peacockii str. Rustic]
gi|238625113|gb|ACR47819.1| lipoprotein releasing system transmembrane protein [Rickettsia
peacockii str. Rustic]
Length = 451
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 92/264 (34%), Positives = 134/264 (50%), Gaps = 1/264 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ F +A+RY + + F+SI S S +GVMIGV LIVVMSVMNGF ++ K ++G+
Sbjct: 40 NNFIFKIAFRYFRAKKNEKFVSIISAFSLVGVMIGVATLIVVMSVMNGFHIELTKNIIGL 99
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
NG +VI ++ + Y+ I +L V V GQA S SGVLV+G+
Sbjct: 100 NGDIVINRQGGSIDHYEEIKAKLLKQDYVKHVTFIAHGQALAL-GKSNNSGVLVKGMKLK 158
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
D S F ++F + +G+ LA NLG+++GDKI ++SP T G
Sbjct: 159 DLSVRNEIFKNVNFGSFDNFHGKNVIALGEQLASNLGVTVGDKIRLISPNSVSTTFGSMP 218
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
RSK + V+ +F DYD + M L AQ + +L N ++ IE+ DPD I
Sbjct: 219 RSKEFKVIAIFNSGMYDYDLTTILMPLTAAQNFLSLGNDINLIEINSLDPDKALTYSHKI 278
Query: 245 VRILGNGVVVIDWQQRYQIFFSCY 268
+LG + V +WQ F S
Sbjct: 279 QSLLGPTLYVFNWQTLNSQFLSAL 302
>gi|171059079|ref|YP_001791428.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Leptothrix cholodnii SP-6]
gi|170776524|gb|ACB34663.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Leptothrix cholodnii SP-6]
Length = 418
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 79/271 (29%), Positives = 128/271 (47%), Gaps = 5/271 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNA---FISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E+ + WRY + R FIS S +S +G+ +GV ALI+V+SVMNGF++++
Sbjct: 1 MNWPYEMRIGWRYTRAGRGGRRNGFISFISGVSMLGIALGVAALIIVLSVMNGFQKEVRD 60
Query: 60 RVLGINGH-VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
R+L + H V PL D+Q +A +L P V PFV+ QA ++ ++
Sbjct: 61 RMLSVIAHVEVYGNGGEPLADWQALAAQLQRHPQVKATAPFVAAQALIARGDDMRGVLVR 120
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
+ G + GV++G LAR+LG+ GD I +++P G T
Sbjct: 121 GIDPAEEADVTALGAQLKDGVLKRLQPGSWGVVLGAQLARSLGVQEGDSITLVTPSGQTT 180
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
P G+ R K TV G+F +YD+GM M + +A F G+++ + D
Sbjct: 181 PAGVVPRLKQVTVAGVFNAGHYEYDSGMALMHIDDAARLFRTGGP-QGVQLRLADLHQAR 239
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
++V LG V DW + +F +
Sbjct: 240 TVAADLVGGLGPAYQVRDWTRTNATWFDAVQ 270
>gi|257454425|ref|ZP_05619687.1| lipoprotein releasing system transmembrane protein LolC
[Enhydrobacter aerosaccus SK60]
gi|257448191|gb|EEV23172.1| lipoprotein releasing system transmembrane protein LolC
[Enhydrobacter aerosaccus SK60]
Length = 426
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 65/267 (24%), Positives = 119/267 (44%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R N FIS S IS +G+ +GV LI V+SVMNGF ++ R+L
Sbjct: 16 MFRPLALFLGLRYTRAERSNRFISFISLISMVGLTLGVAVLITVLSVMNGFDRELKSRIL 75
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ + + D+Q +A + P V V PF+ Q ++ ++
Sbjct: 76 GMVPQATV-TASEIIPDWQTLAQTIQKNPKVEAVAPFIQLQGMLTANGQVAGIMVTGIEP 134
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G+V + ++IGK +A +LG+ GD + ++ P +P G+
Sbjct: 135 SYEKKVSIIHQHMESGSVDSLKAGQFDIVIGKQMADSLGVKQGDMVTLVLPEASPSPAGV 194
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV G++ + + M ++ + +A L GI + +KD A + +
Sbjct: 195 IPRFKRFTVTGVYDISPEVNNI-MAFIPMNDAATLLRLPAGAQGIRMKLKDLFAAPQVAQ 253
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ N ++ DW + F +
Sbjct: 254 QAASLAPNMLMPSDWTSTHGNLFGAIQ 280
>gi|254488102|ref|ZP_05101307.1| ABC lipoprotein efflux transporter, inner membrane subunit, LolE
[Roseobacter sp. GAI101]
gi|214044971|gb|EEB85609.1| ABC lipoprotein efflux transporter, inner membrane subunit, LolE
[Roseobacter sp. GAI101]
Length = 448
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 74/274 (27%), Positives = 129/274 (47%), Gaps = 11/274 (4%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE ++AWRYL + R +S+ ++IS IG+ + V ALI ++V +GFR + + +LG
Sbjct: 28 FAPFEWMIAWRYLRARRAEGGVSVMTWISLIGITLAVFALIATLAVRSGFRAEFVGTILG 87
Query: 64 INGHVVIQQ---------KYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
N HV I + DY +A R+ +P V P V GQ + +
Sbjct: 88 ANAHVTIYNAATVDDNGGTQTGIADYTQMAERVAAVPGVTHAAPLVRGQVMANKGQANAG 147
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ + + + + + +G+ IG +A++L + +GD+I I+SP
Sbjct: 148 IEIYGIDGADLANIPRIANPETAVG--DLANFDQGIAIGSGVAQSLRVGVGDRIKIISPN 205
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G T G R +Y V+ +F D D Y+ L EAQ +F+ E +EV V+DP
Sbjct: 206 GVKTAFGTSPRVNAYDVVYVFSAGRYDIDRTRAYLPLAEAQSFFDREGLADELEVMVEDP 265
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
D +++ + ++ G+ + W+ F +
Sbjct: 266 DRVDELTDALLLAAGDRGMAWTWRDASGSFLNAL 299
>gi|319404242|emb|CBI77835.1| ABC transporter, permease protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 426
Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 107/266 (40%), Positives = 166/266 (62%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS +E ++A+RY+ N+K+ F SI S IS IG+M+GV AL+VVM+VMNGFR +++ R+LG
Sbjct: 13 FSSYEWMIAFRYMIPNKKHMFTSIISIISLIGIMLGVFALVVVMAVMNGFRTELLNRILG 72
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGH+++Q DY + + L+ I D+ VLP + GQA V G G+G LVRG+
Sbjct: 73 MNGHLIVQTIDSNFTDYNTLISSLESIKDIKLVLPIIEGQALVQGNVERGTGALVRGVRQ 132
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D L+ FD+ +G+ IG LA LG+++G + I++P GD TP G+
Sbjct: 133 KDLMKLKTVAQNIISGTLAQFDKEEGIAIGSGLAEKLGLTVGSHLRIITPDGDDTPFGVT 192
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K+Y V+ +F + +YD+ V+M L EAQ++FNLE + +E+F+ DPDAI++
Sbjct: 193 PRVKAYKVVAIFEVGMSEYDSIFVFMPLHEAQIFFNLEEKIQSLELFLNDPDAIDQVKPV 252
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
I + + + +IDW+ + Q FFS +
Sbjct: 253 IEKTVNQQIHLIDWRTQNQSFFSALQ 278
>gi|90579505|ref|ZP_01235314.1| putative ABC transporter, integral membrane protein [Vibrio
angustum S14]
gi|90439079|gb|EAS64261.1| putative ABC transporter, integral membrane protein [Vibrio
angustum S14]
Length = 415
Score = 134 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 56/267 (20%), Positives = 113/267 (42%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + R+ S ++N +S S S +G+ +GV +IV +S MNGF ++ RVL
Sbjct: 1 MFRPLSLYIGSRFNRSKKRNRMVSFISMSSMLGIAVGVAVIIVGLSAMNGFERELQTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ +Q PL ++Q + +++ PDV P+V A + + + +
Sbjct: 61 SVIPQGELQAVEPPLNNWQPLVKQIEKHPDVTAAAPYVEFTALLEKGTKLKAVGVRGVNP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S K VI+G+ +A++L + +GD + + P D +
Sbjct: 121 QEQLKVSELPRYVLNDAWSKFTAGKKEVILGQGVAKSLNVKVGDWLTAMIPNADPEMTQL 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + + D+ + + L +AQ Y ++ VSGI++ V ++ +
Sbjct: 181 RAPHRIRLQVAGILALGGEIDHKLAIVPLADAQKYMDMGQGVSGIQINVDKVLEAQRIVK 240
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L V + W Q+Y + +
Sbjct: 241 EVGNTLPVYVYLKSWTQQYGYMYRDIQ 267
>gi|159043299|ref|YP_001532093.1| lipoprotein releasing system [Dinoroseobacter shibae DFL 12]
gi|157911059|gb|ABV92492.1| lipoprotein releasing system [Dinoroseobacter shibae DFL 12]
Length = 428
Score = 134 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 80/275 (29%), Positives = 125/275 (45%), Gaps = 11/275 (4%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+RFE ++AWRYL + R +S+ ++IS +G+ + V ALI ++V +GFR + + +LG
Sbjct: 8 FARFEWLIAWRYLRARRSEGGVSVMTWISLVGITLAVFALIATLAVRSGFRAEFVDTILG 67
Query: 64 INGHVVIQQKYYPL---------VDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
N HV + Y +Y L +P V + P + GQ +
Sbjct: 68 ANAHVTVYGAIYDAETGATSRLLTEYAARTEALAAVPGVTRAAPLIRGQVITTHEGRTSG 127
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ S + + G+ IG +AR LG +GD I ++SP
Sbjct: 128 VEVFGLSEGDLRSLPGIAADETARG--DLDRFSDGIAIGSGVARELGAGVGDMIRLISPD 185
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G TP G R K+Y V+ +F + D D VYM EAQ +FN E IEV V DP
Sbjct: 186 GVKTPFGTSPRVKAYEVVYVFSLGRFDIDRTRVYMPFAEAQAFFNREGGADEIEVMVADP 245
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ +++ +++ G G ++ WQ F E
Sbjct: 246 ENLDRYTLGLMQAAGQGALLWTWQDASGGFLRALE 280
>gi|119945863|ref|YP_943543.1| lipoprotein releasing system, transmembrane protein, LolC/E family
protein [Psychromonas ingrahamii 37]
gi|119864467|gb|ABM03944.1| lipoprotein releasing system, transmembrane protein, LolC/E family
protein [Psychromonas ingrahamii 37]
Length = 408
Score = 134 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 79/268 (29%), Positives = 124/268 (46%), Gaps = 5/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RY S R N FIS S S G+ +GV+ALI V+SVMNGF ++ R+L
Sbjct: 1 MFYPLSVFIGLRYTKSKRNNKFISFVSLFSTGGITLGVLALITVLSVMNGFENELKVRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G H +I + + D+Q L +P V V P V +A + + G GV + GI
Sbjct: 61 GAIPHAIISNQEQVIDDWQSRLPALQNMPLVNTVEPVVRSEAIIQ-SNRGLQGVQLEGII 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G +S+ VIIG+ LA+ LG++ GDKI I+S G
Sbjct: 120 PDLYVSNVIKNNLTLGQMSDLKAGQYNVIIGQSLAQQLGVTKGDKIRIISARGSRFTPLG 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + D D +V + Q+A + + V+G+ ++ D +E
Sbjct: 180 RIPSQRNFTVMGLFAVGSDVDKQLVLLHAQDAARLIRIGLDQVTGLRLYFNDAFDVEDW- 238
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ +L G + DW+Q + FS +
Sbjct: 239 --LPPVLKEGQTLQDWRQTHGELFSAVK 264
>gi|254420218|ref|ZP_05033942.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Brevundimonas sp. BAL3]
gi|196186395|gb|EDX81371.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Brevundimonas sp. BAL3]
Length = 428
Score = 134 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 79/269 (29%), Positives = 129/269 (47%), Gaps = 4/269 (1%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS +E+ +A RYL + RK ++ + ISFIG+M+ V LI VMS+M GFR +++ R+L
Sbjct: 11 FSSWEIGLALRYLRAKRKEGGVATIAVISFIGIMLAVAVLISVMSIMAGFRSELLGRMLS 70
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
NGH+ +Q D R+ +P V+ V P Q+ V + ++
Sbjct: 71 FNGHMYVQGPVLASEDRDAALKRIAAVPGVVSVTPLNESQSLVRVGNFTTGAMVRGVRPQ 130
Query: 124 S---DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + + G +++G LA +LG+ +GD + + SP G +
Sbjct: 131 DLATTKYVFDSLTPKERADFGKGAYGGDRILMGAALANSLGLRVGDPVTLYSPTGADSAF 190
Query: 181 GMGIR-SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
G K+Y V G+FR D+D ++M L++ QL+F E IE+ V DPD + +
Sbjct: 191 GNLGGLEKTYFVGGLFRSGTADFDRAFLFMPLEQQQLFFGKEGVWDAIEIKVDDPDRVGE 250
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCY 268
I G G V+ DW++R F+
Sbjct: 251 LTPAIRDAAGPGSVISDWRERLAAFYGAL 279
>gi|221640236|ref|YP_002526498.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Rhodobacter sphaeroides KD131]
gi|221161017|gb|ACM01997.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Rhodobacter sphaeroides KD131]
Length = 428
Score = 134 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 79/274 (28%), Positives = 130/274 (47%), Gaps = 11/274 (4%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE ++AWRYL + R +S+ ++IS +G+ + V ALI +SV GFR + + +LG
Sbjct: 8 FAAFEWMIAWRYLRARRAEGGVSVMTWISLVGITLAVFALIATLSVRAGFRAEFVDTILG 67
Query: 64 INGHVVIQ---------QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
N HV + Q DY +A R+ +P V++ P V GQ + +
Sbjct: 68 ANAHVTVYSAGRVTETGQLIRGFEDYDPVAARVAAVPGVLRAAPVVKGQVMATANGASSG 127
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ + + + +G+ +G +A+ LG+S+GD++ ++SP
Sbjct: 128 VEVFGMRQADLATIPRIGIGAEHVGDI--ERFDEGIALGSGVAQELGVSVGDRVRLISPD 185
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G T G R +Y V+ +F D D VYM L EAQ YFN E IEV V+DP
Sbjct: 186 GVKTAFGTSPRVSAYEVVYVFTAGRYDIDRTRVYMPLAEAQSYFNREGRADEIEVMVEDP 245
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+A++ +++ G G ++ W+ F
Sbjct: 246 EAVDAMAPALMQAAGEGSMLWTWRDSAGSFLRAL 279
>gi|269102435|ref|ZP_06155132.1| lipoprotein releasing system transmembrane protein LolE
[Photobacterium damselae subsp. damselae CIP 102761]
gi|268162333|gb|EEZ40829.1| lipoprotein releasing system transmembrane protein LolE
[Photobacterium damselae subsp. damselae CIP 102761]
Length = 414
Score = 134 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 59/267 (22%), Positives = 110/267 (41%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + R+ + ++N +S S S IG+ +GV +I+ +S MNGF ++ RVL
Sbjct: 1 MFRPLSLYIGSRFSRAKKRNRMVSFISMSSTIGIAVGVAVIILGLSAMNGFERELQNRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H ++ PL D+Q I R++ P V P+V A + + + +
Sbjct: 61 AVIPHGELEAVKPPLQDWQPIIKRVEQSPLVTGAAPYVQFTALLEKGAKLKAVGIRGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ SN K +IIG+ +A L + GD + + P D
Sbjct: 121 KDETKVSALPKFVLDNAWSNFKAGHKEIIIGQGIANKLKVKRGDWLTAMIPSADPDAKLK 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + + LQ+AQ Y ++ + VSGI + V D + +
Sbjct: 181 A-PHRIRLQVAGILALGGQIDHTLAIVPLQDAQQYLDMGDGVSGISLNVTDVLNAQHIVK 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L V + W Q++ + +
Sbjct: 240 EVGYTLPVYVYLKSWTQKFGYLYRDIQ 266
>gi|90408102|ref|ZP_01216272.1| hypothetical protein PCNPT3_08165 [Psychromonas sp. CNPT3]
gi|90310788|gb|EAS38903.1| hypothetical protein PCNPT3_08165 [Psychromonas sp. CNPT3]
Length = 408
Score = 134 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 67/268 (25%), Positives = 118/268 (44%), Gaps = 5/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY S R NAF+S S S G+ +GV+ALI V+SVMNGF ++ R+L
Sbjct: 1 MFYPLSLFIGLRYTKSKRNNAFVSFVSLFSTGGITLGVLALITVLSVMNGFESELKTRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G HV + L ++++ L+ PD ++ + + + GV V GI
Sbjct: 61 GAVPHVSVSNNAQLLTKWEYLLPILENNPD-VRAADPMVSSDAIILSNKNIQGVHVDGIY 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+S S G +S +++G L R L + +GDK+ ++S G
Sbjct: 120 PQRYSSQVLMNSMLPGTLSRLEAGKYRILMGDRLGRLLSVDVGDKVRVVSARGSRFTPLG 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
+ S+ + F D D ++ M +A + +N ++ I +++ DP IE
Sbjct: 180 RLPSERKFTVAGFFSVGSDVDQNLILMHATDASKLIRIAKNNITDIRLYLNDPFDIESWT 239
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
L + + DW+ + F+ +
Sbjct: 240 P---PTLDASLALTDWRSTHGELFAAVK 264
>gi|24373810|ref|NP_717853.1| lipoprotein releasing system transmembrane protein LolE [Shewanella
oneidensis MR-1]
gi|24348205|gb|AAN55297.1|AE015667_7 lipoprotein releasing system transmembrane protein LolE [Shewanella
oneidensis MR-1]
Length = 410
Score = 134 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 72/271 (26%), Positives = 121/271 (44%), Gaps = 5/271 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ RF + V +RY + + NAF S + + G+ +GV ALIVV SVMNG + +R+L
Sbjct: 1 MDLRFPLYVGYRYWRARKANAFASFITLFAVSGIFLGVAALIVVSSVMNGLEGQLKQRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G + + K PL D+ A +L +P V V P VS QA V ++ + +
Sbjct: 61 GAVPQLTVYTKA-PLSDWTIAAEKLTMLPGVQGVTPSVSTQAMVQSAANIRAVQVFGVFP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G S VI+G +LAR L +S GD + +LS G V
Sbjct: 120 ELAEKLSAVAQHTYSGAFSELTSGQYQVILGSELARQLKVSPGDTVRLLSGDGVVYSPLG 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ ++ D G+ Y+ Q+A+ + ++ + +++ DP
Sbjct: 180 PVPSQRKFLVSAVFEMGSQVDAGVAYVHYQDAKRLMRQPSDEINQLRLYLNDPFTAPALA 239
Query: 242 ENIVRIL---GNGVVVIDWQQRYQIFFSCYE 269
+++ +IL G DW+ Y FS +
Sbjct: 240 KDVQQILTAQGIEATTSDWRDTYGHLFSAVK 270
>gi|126735145|ref|ZP_01750891.1| lipoprotein releasing system transmembrane protein LolE
[Roseobacter sp. CCS2]
gi|126715700|gb|EBA12565.1| lipoprotein releasing system transmembrane protein LolE
[Roseobacter sp. CCS2]
Length = 421
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 81/265 (30%), Positives = 124/265 (46%), Gaps = 2/265 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F++FE ++AWRY+ + R +S+ ++IS IGV + V ALI ++V +GFR + I + G
Sbjct: 10 FAKFEWMIAWRYIRAKRAEGGVSVMTWISLIGVTLAVFALIATLAVRSGFRAEFIDTIAG 69
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
N HV + + D++ +A+R+ + V V P V GQA SG G +
Sbjct: 70 ANAHVSVVMPRAVIQDFEDVADRVRAVEGVQSVAPLVRGQAMASGSGRIGLADIYGIRLE 129
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ S +D G+ IG LA NLG++IGD+I I + G TPMG
Sbjct: 130 DLKASDAIVQSERTIGNIDD--LPNGIAIGSALANNLGLTIGDRIEITTRSGAATPMGQA 187
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R +Y V+ +F D Y+ AQL FN + +E+ + D + E ++
Sbjct: 188 TRRNAYEVVFIFSTGRFQIDEVRAYLPFDVAQLVFNRDGVADELEIRLDDLNQSEVLKQD 247
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCY 268
I G G WQ R F
Sbjct: 248 IANAAGPGFWAYSWQDRVGRFLRAL 272
>gi|107025588|ref|YP_623099.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Burkholderia cenocepacia AU 1054]
gi|116693229|ref|YP_838762.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Burkholderia cenocepacia HI2424]
gi|105894962|gb|ABF78126.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia cenocepacia AU 1054]
gi|116651229|gb|ABK11869.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia cenocepacia HI2424]
Length = 422
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 4/265 (1%)
Query: 6 RFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
FE + RY R+ + F+S + + G+ +GV ALIVV+SVMNGFR ++ R+L
Sbjct: 9 PFEWQIGLRYARGGRRSAGDGFVSFIAGAAMAGIALGVAALIVVLSVMNGFRTEVRDRML 68
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ HV I + D++ A+ V V P+V QA ++ + L
Sbjct: 69 SVLAHVEIFSPSGAMPDWRLTAHESLQNAAVRAVAPYVDAQALLTNAGNVTGVALRGIDP 128
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + G + G+++G LA L + IGD+I +P
Sbjct: 129 VLEPRVSEIARKLKTGRLDALVPGEMGIVLGAALADTLHVKIGDRITFFAPGNTARLGDA 188
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + + V+G F YD+ + Y+ +++AQ N+ NA +GI + + D +
Sbjct: 189 LPRFRQFNVVGTFESGHYQYDSALAYIHIRDAQQLSNV-NAPTGIRLRIDDLQRAPEIAL 247
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSC 267
+ R L + + DW ++ + +F
Sbjct: 248 ALSRTLSGNLYLRDWTRQNRTWFEA 272
>gi|319407250|emb|CBI80889.1| ABC transporter, permease protein [Bartonella sp. 1-1C]
Length = 426
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 107/266 (40%), Positives = 166/266 (62%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS +E ++A+RY+ N+K+ F SI S IS IG+M+GV AL+VVM+VMNGFR +++ R+LG
Sbjct: 13 FSSYEWMIAFRYMIPNKKHMFTSIISIISLIGIMLGVFALVVVMAVMNGFRTELLNRILG 72
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGH+++Q DY + + L+ I D+ VLP + GQA V G G+G LVRG+
Sbjct: 73 MNGHLIVQTIDSNFTDYNTLISSLESIKDIKLVLPIIEGQALVQGNLERGTGALVRGVRQ 132
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D L+ FD+ +G+ IG LA LG+++G + I++P GD TP G+
Sbjct: 133 KDLMKLKTVAQNISSGTLAQFDKEEGIAIGSGLAEKLGLTVGSHLRIITPDGDDTPFGVT 192
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K+Y V+ +F + +YD+ V+M L EAQ++FNLE + +E+F+ DPDAI++
Sbjct: 193 PRVKAYKVVAIFEVGMSEYDSIFVFMPLHEAQIFFNLEEKIQSLELFLNDPDAIDQIKPV 252
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
I + + + +IDW+ + Q FFS +
Sbjct: 253 IEKTVNQQIHLIDWRTQNQSFFSALQ 278
>gi|84515337|ref|ZP_01002699.1| lipoprotein releasing system transmembrane protein LolE [Loktanella
vestfoldensis SKA53]
gi|84510620|gb|EAQ07075.1| lipoprotein releasing system transmembrane protein LolE [Loktanella
vestfoldensis SKA53]
Length = 418
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 73/265 (27%), Positives = 122/265 (46%), Gaps = 2/265 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F++FE ++AWRY+ + R +S+ ++IS IGV + V ALI ++V +GFR + I ++G
Sbjct: 7 FAKFEWMIAWRYIRAKRAEGGVSVMTWISLIGVTLAVFALIATLAVRSGFRAEFIDTIVG 66
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ HV + + + DY +++R+ +P V V P V GQA + +
Sbjct: 67 ADAHVTVLRPREVIADYADMSDRIMALPGVASVAPLVRGQAMAGAFGQIALADIYGIHLD 126
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ S +D G+ +G LA NLG+ +GD+I I + G TPMG
Sbjct: 127 DLKASEAIVDSERTIGNIDD--LQGGIALGSALAANLGLGLGDRIEITTRSGAATPMGQS 184
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R ++ V+ +F D Y+ AQ FN + ++V + D + E ++
Sbjct: 185 TRRNAFDVVYIFSTGRYQIDEVRAYLPFDVAQTIFNRDGVADELDVRLDDINKSEALKQD 244
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCY 268
I G + WQ R F
Sbjct: 245 IANAAGPNIWAYSWQDRVGRFLRAL 269
>gi|126463193|ref|YP_001044307.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Rhodobacter sphaeroides ATCC 17029]
gi|126104857|gb|ABN77535.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Rhodobacter sphaeroides ATCC 17029]
Length = 428
Score = 133 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 79/274 (28%), Positives = 130/274 (47%), Gaps = 11/274 (4%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE ++AWRYL + R +S+ ++IS +G+ + V ALI +SV GFR + + +LG
Sbjct: 8 FAAFEWMIAWRYLRARRAEGGVSVMTWISLVGITLAVFALIATLSVRAGFRAEFVDTILG 67
Query: 64 INGHVVIQ---------QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
N HV + Q DY +A R+ +P V++ P V GQ + +
Sbjct: 68 ANAHVTVYSAGRVTETGQLIRGFEDYDPVAARMGAVPGVLRAAPVVKGQVMATANGASSG 127
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ + + + +G+ +G +A+ LG+S+GD++ ++SP
Sbjct: 128 VEVFGMRQADLATIPRIGIGAEHVGDI--ERFDEGIALGSGVAQELGVSVGDRVRLISPD 185
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G T G R +Y V+ +F D D VYM L EAQ YFN E IEV V+DP
Sbjct: 186 GVKTAFGTSPRVSAYEVVYVFTAGRYDIDRTRVYMPLAEAQSYFNREGRADEIEVMVEDP 245
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+A++ +++ G G ++ W+ F
Sbjct: 246 EAVDAMAPALMQAAGEGSMLWTWRDSAGSFLRAL 279
>gi|90413105|ref|ZP_01221102.1| putative ABC transporter integral membrane subunit [Photobacterium
profundum 3TCK]
gi|90325948|gb|EAS42394.1| putative ABC transporter integral membrane subunit [Photobacterium
profundum 3TCK]
Length = 402
Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 64/268 (23%), Positives = 116/268 (43%), Gaps = 7/268 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RYL + F S++S G+ IGV++L+ V+SVMNGF + + R+L
Sbjct: 1 MFHPVSFFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVLSLVTVLSVMNGFEQQLKDRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ VI Q + + L +P V V P G+A + SS +G ++
Sbjct: 61 GVLPQAVISQDDGRMPVSDTVPQSLQQLPHVTHVTPITRGEAVLQSASSLAAGNMIGIDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G + N V+IG+ LA LG+ +GDKI ++
Sbjct: 121 SYYE---PIAMDMTVGKLDNLVAGSYRVVIGQALANQLGVQVGDKIRLMVTSASQYTPLG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + F D D ++ ++Q+A + + ++G +F+ DP A+ +
Sbjct: 178 RIPSQRNFTIEGFFDTGSDVDKQLILTNIQDAGKLLRYKVDQITGWRLFLDDPFAVTELA 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + N DW+++ F +
Sbjct: 238 QV---PMPNDWQWSDWREQRGELFQAVK 262
>gi|54309557|ref|YP_130577.1| putative ABC transporter integral membrane subunit [Photobacterium
profundum SS9]
gi|46913993|emb|CAG20775.1| putative ABC transporter integral membrane subunit [Photobacterium
profundum SS9]
Length = 402
Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 65/268 (24%), Positives = 116/268 (43%), Gaps = 7/268 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RYL + F S++S G+ IGV++L+ V+SVMNGF + + R+L
Sbjct: 1 MFHPVSFFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVLSLVTVLSVMNGFEQQLKDRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ VI Q + I L +P V V P G+A + SS +G ++
Sbjct: 61 GVLPQAVISQDDGRMPVSDTIPQSLQQLPHVTHVTPITRGEAVLQSASSLAAGNMIGIDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G + N V+IG+ LA LG+ +GDKI ++
Sbjct: 121 SYYE---PIAMDMTVGKLDNLISGSYRVVIGQALANQLGVQVGDKIRLMVTSASQYTPLG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + F D D ++ ++Q+A + + ++G +F+ DP A+ +
Sbjct: 178 RIPSQRNFTIEGFFDTGSDVDKQLILTNIQDAGKLLRYKADQITGWRLFLDDPFAVTELA 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + N DW+++ F +
Sbjct: 238 QV---SMPNDWQWSDWREQRGELFQAVK 262
>gi|311107117|ref|YP_003979970.1| lipoprotein releasing system, transmembrane protein, LolC/E family
protein [Achromobacter xylosoxidans A8]
gi|310761806|gb|ADP17255.1| lipoprotein releasing system, transmembrane protein, LolC/E family
protein [Achromobacter xylosoxidans A8]
Length = 426
Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 63/276 (22%), Positives = 131/276 (47%), Gaps = 12/276 (4%)
Query: 6 RFEVIVAWRY-------LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMI 58
+E+ + RY R++ FIS + S G+ +GV ALIVV+SVMNGF++++
Sbjct: 5 PYELWIGARYAGLARIRQRRGRRDRFISFIAASSMAGIALGVAALIVVLSVMNGFQKEVR 64
Query: 59 KRVLGINGHVVIQQ----KYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
R+L + H+ + L +Q A+ + P+V PFV+ Q + +
Sbjct: 65 DRMLSVLPHIELYIPGAAPERVLERWQEFASAAEKNPEVKAGAPFVAAQGMLVRGQALRG 124
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ ++ + G +++ GV++G +LA +G+ +GD + +++P
Sbjct: 125 VQVRGIDPQTEGNVSDLPRQMVSGKLTDLKPGSFGVVLGNELADGMGVKLGDTLLMMAPQ 184
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G ++P G R + +TV+G+F +YD+ + ++ ++A F G+ + V D
Sbjct: 185 GSISPAGFTPRMRQFTVVGVFSSGHYEYDSSLAFVDDEDAARVFRDSGTA-GVRLRVADM 243
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ + ++L ++ DW + + +F+ ++
Sbjct: 244 QRAPEVAAELQKVLPPYMMASDWSRNNRTWFAAVKT 279
>gi|157826123|ref|YP_001493843.1| lipoprotein releasing system, transmembrane protein [Rickettsia
akari str. Hartford]
gi|157800081|gb|ABV75335.1| Lipoprotein releasing system, transmembrane protein [Rickettsia
akari str. Hartford]
Length = 415
Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 93/264 (35%), Positives = 137/264 (51%), Gaps = 1/264 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ F +A+RY + + F+SI S S +GVMIGV ALIVVMSVMNGF ++ K ++G+
Sbjct: 4 NNFIFNIAFRYFRAKKNEKFVSIISAFSLVGVMIGVAALIVVMSVMNGFHIELTKNIIGL 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
NG +VI ++ + +Y+ I +L V V GQA S SGVLV+G+
Sbjct: 64 NGDIVINRQGASIDNYEEIKTKLLKQDYVKHVTFIAHGQALAL-GKSNNSGVLVKGMKLK 122
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
D S F ++F + +G+ LA NLG+++GDKI ++SP+ T G
Sbjct: 123 DLSLRNEIFKNVNFGSFDNFYGKNVIALGEQLASNLGVTVGDKIRLISPHSVSTAFGSMP 182
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
RSK + V+ +F DYD + M L AQ + +L N ++ IE+ DPD I
Sbjct: 183 RSKEFKVIAIFNSGMYDYDLTTILMPLTAAQNFLSLGNDINLIEINSLDPDKALTYSYKI 242
Query: 245 VRILGNGVVVIDWQQRYQIFFSCY 268
+LG + V +WQ F S
Sbjct: 243 QSLLGPNLYVFNWQTLNSQFLSAL 266
>gi|119384577|ref|YP_915633.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Paracoccus denitrificans PD1222]
gi|119374344|gb|ABL69937.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Paracoccus denitrificans PD1222]
Length = 433
Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 72/278 (25%), Positives = 127/278 (45%), Gaps = 13/278 (4%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FSR+E ++AWRYL + R +S+ ++IS IG+ +GVMAL+ ++V GFR + + +LG
Sbjct: 7 FSRYEFMIAWRYLRARRAEGGVSVMTWISLIGITLGVMALVATLAVRAGFRAEFVDTILG 66
Query: 64 INGHVVIQQKYYPLVD---YQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
N H + + + + + + + + V+ R
Sbjct: 67 ANAHSTVYYAPTQVYNELTEETYVTQGRIEDYDALAARIAQIPGVTRAVPAVRAQVMARQ 126
Query: 121 ISNSDFSYLQNSFSRFYGNV----------SNDFDRGKGVIIGKDLARNLGISIGDKINI 170
+ + G + + D +G+ IG +ARNLG+ IGD++ +
Sbjct: 127 GDAAALGDVHGITLDALGGMAGIADPESASGSLDDFDQGIAIGIGMARNLGVRIGDRLQL 186
Query: 171 LSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVF 230
++P G TP G R +S+ V+ +F D D +YM L EAQ +FN E I V+
Sbjct: 187 VAPDGAKTPFGTTPRVESFEVVYIFSAGRYDVDQARIYMPLAEAQSFFNREGLADEIGVY 246
Query: 231 VKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
V DP+ ++ ++++LG + W+ F +
Sbjct: 247 VADPERVDDWTMPLLQVLGERGQIWTWRDASGSFLAAL 284
>gi|261210525|ref|ZP_05924818.1| lipoprotein releasing system transmembrane protein LolE [Vibrio sp.
RC341]
gi|260840310|gb|EEX66881.1| lipoprotein releasing system transmembrane protein LolE [Vibrio sp.
RC341]
Length = 414
Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 56/267 (20%), Positives = 110/267 (41%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS + + R+ + ++N +S S S IG+ +GV +I+ +S MNGF ++ RVL
Sbjct: 1 MFSSLALFIGGRFSRAKQRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQSRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + P+ + + + P++I P+V A + + +
Sbjct: 61 SVIPHGEFEGVRGPVERWPDLMAQAARQPNIIAAAPYVKMTALAENGTQLKAIEIRGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + S + + VI+G+ +A L + +GD I ++ P
Sbjct: 121 QREQAVSRLSQFITPQAWQHFNPGEQQVILGQGVADKLSVQVGDFITLMIPSATSGEKVQ 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + + L++AQ Y NL + V+GI V V D +
Sbjct: 181 APKRVRV-KVSGLLTLNGQIDHSLALLPLEDAQSYANLGSGVTGISVKVADVLQATQIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L V + WQQ+Y + +
Sbjct: 240 EVGNQLNEYVYLHSWQQKYGFLYRDIQ 266
>gi|304312033|ref|YP_003811631.1| hypothetical protein HDN1F_24050 [gamma proteobacterium HdN1]
gi|301797766|emb|CBL45988.1| Conserved hypothetical protein [gamma proteobacterium HdN1]
Length = 411
Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 70/266 (26%), Positives = 113/266 (42%), Gaps = 2/266 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + V RYL + ++N FIS S + +GVM+GV LIVV+SV+NGF + +RVL
Sbjct: 1 MFRPLSLFVGLRYLRAKQRNHFISFISSATILGVMLGVAVLIVVLSVINGFDREFQQRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H + D+ L+ IP V PFV Q + +L+
Sbjct: 61 GMVSHA-NIWSRSGIEDWPAAVKSLEQIPGVEGAAPFVRLQGMLMQQGGSTGVILMGVDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++S ++IGK +A LG+S+GD + ++ P + G+
Sbjct: 120 AYEARVSILPKYLEGTSLSVLSAGSFNILIGKPVAERLGLSVGDSVTLILPSPSSSSAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + V G+F + Y+SL +AQ L GI + V D E
Sbjct: 180 SPLFQRFNVAGIFSTGSEVDQL-LAYVSLGDAQPLAQLGERAQGIRLRVADLFHASTIAE 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCY 268
N V L +DW + ++
Sbjct: 239 NAVASLRGPYWAVDWTLTHGNLYASI 264
>gi|56696020|ref|YP_166374.1| lipoprotein releasing system transmembrane protein LolE [Ruegeria
pomeroyi DSS-3]
gi|56677757|gb|AAV94423.1| lipoprotein releasing system transmembrane protein LolE [Ruegeria
pomeroyi DSS-3]
Length = 447
Score = 133 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 82/275 (29%), Positives = 129/275 (46%), Gaps = 11/275 (4%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE +AWRYL + R +S+ ++IS IG+ + V ALI ++V +GFR D + +LG
Sbjct: 27 FAPFEWKIAWRYLRARRAEGGVSVMTWISLIGITLAVFALIATLAVRSGFRSDFVGTILG 86
Query: 64 INGHVVIQQKYYPLVDYQ---------FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
N HV + + Q +A R+ + V + P V GQ + +
Sbjct: 87 ANAHVTVYNPGEYRENGQIDRTIPNYAEMAARVAEVAGVTRAAPLVKGQVMAAAQNRNAG 146
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ + + + S + +G+ +G +AR LG+++GD+I ++SP
Sbjct: 147 VEVFGIATGDLAALPGITNSDRSYG--DLSRFDQGIALGSGVARELGVTVGDRIKLISPN 204
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G TPMG R +Y V+ +F D D VYM EAQ YFN E IEV V +P
Sbjct: 205 GARTPMGTSPRVNAYEVVYVFSAGRYDIDRTRVYMPFGEAQAYFNREGVADEIEVMVSEP 264
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ +++ I+ G+G V WQ F E
Sbjct: 265 ERLDRVLIPILSAAGDGAQVWTWQDASGGFLRALE 299
>gi|269960989|ref|ZP_06175358.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269834208|gb|EEZ88298.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 402
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 62/268 (23%), Positives = 113/268 (42%), Gaps = 7/268 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RYL + F S++S G+ IGVMAL+ V+SVMNGF + +R+L
Sbjct: 1 MYHPISLFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMALVTVLSVMNGFEAQLKERIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H V+ Q + + + K P V G+A + + +G L+
Sbjct: 61 GVLPHAVVSQHDGKTPFSENAPQFIQDMSTSAKPEPIVRGEAVIQSSAQLTAGYLIGI-- 118
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S G +S+ V +G LAR+L +S+GDK+ ++
Sbjct: 119 -EPKLGDPISNHLIAGRLSSLKAGEYKVFLGHSLARSLKVSMGDKVRLMVTNATQFTPLG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + D D ++ +++ +A L + VSG V+ DP + +
Sbjct: 178 RIPSQRNFTVAGIFNTGSDVDGQLMIVNMTDASKLMRLPKDTVSGWRVYFSDPFMVTEFA 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + L + DW+++ F +
Sbjct: 238 D---KPLPDDWKWSDWREQRGELFQAVK 262
>gi|77464351|ref|YP_353855.1| ABC lipoprotein efflux transporter, inner membrane subunit, LolE
[Rhodobacter sphaeroides 2.4.1]
gi|77388769|gb|ABA79954.1| ABC lipoprotein efflux transporter, inner membrane subunit, LolE
[Rhodobacter sphaeroides 2.4.1]
Length = 428
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 79/274 (28%), Positives = 130/274 (47%), Gaps = 11/274 (4%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE ++AWRYL + R +S+ ++IS +G+ + V ALI +SV GFR + + +LG
Sbjct: 8 FAAFEWMIAWRYLRARRAEGGVSVMTWISLVGITLAVFALIATLSVRAGFRAEFVDTILG 67
Query: 64 INGHVVIQ---------QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
N HV + Q DY +A R+ +P V++ P V GQ + +
Sbjct: 68 ANAHVTVYSAGRITETGQLIRGFEDYDPVAARVAAVPGVLRAAPVVKGQVMATANGASSG 127
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ + + + +G+ +G +A+ LG+S+GD++ ++SP
Sbjct: 128 VEVFGMRQADLATIPRIGIGAEHVGDI--ERFDEGIALGSGVAQELGVSVGDRVRLISPD 185
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G T G R +Y V+ +F D D VYM L EAQ YFN E IEV V+DP
Sbjct: 186 GVKTAFGTSPRVSAYEVVYVFTAGRYDIDRTRVYMPLAEAQSYFNREGLADEIEVMVEDP 245
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+A++ +++ G G ++ W+ F
Sbjct: 246 EAVDAMAPALMQAAGEGSMLWTWRDSAGSFLRAL 279
>gi|325294993|ref|YP_004281507.1| hypothetical protein Dester_0807 [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065441|gb|ADY73448.1| protein of unknown function DUF214 [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 408
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 75/268 (27%), Positives = 134/268 (50%), Gaps = 4/268 (1%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
++ ++ R L + ++S A FI+ +GV++GV ALI+V SVM GF++ + +++L
Sbjct: 1 MNQLVRWLSLRGLKLKK--GYLSFALFIAILGVVVGVAALIIVNSVMTGFQDAIKEKLLS 58
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV-LVRGIS 122
N +++ +K +Y + ++ + V PF+ S + +RG
Sbjct: 59 SNADIIVMKKSGAFYEYDYAERKIKELSHVKGTEPFIHIPVMASSTDISYASGASLRGCD 118
Query: 123 NSDFSYLQNSFSRFYGNVSNDF-DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ + + F + GV++G+ LA NLGI+IGD+I +LSP G TP G
Sbjct: 119 PKKEPTVTDIPRKLILGDWQLFENTKDGVVVGRILADNLGITIGDRITLLSPMGRKTPFG 178
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ R+ S+ V+G+F + +D+G++ + E + F L N V+GI V + DP+ +
Sbjct: 179 IIPRTASFKVVGIFEVGMYQFDSGLILAHIDEVRKKFGLGNIVTGIMVKLDDPENAKIVE 238
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
I LGN + DW + FS +
Sbjct: 239 RKIEETLGNEFIAQDWISLNKSLFSALK 266
>gi|56460624|ref|YP_155905.1| ABC-type transport system, involved in lipoprotein release,
permease [Idiomarina loihiensis L2TR]
gi|56179634|gb|AAV82356.1| ABC-type transport system, involved in lipoprotein release,
permease component [Idiomarina loihiensis L2TR]
Length = 409
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 61/269 (22%), Positives = 114/269 (42%), Gaps = 5/269 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + + +AF + + +F G+ +GVMAL+VVMSVMNGF + +R+L
Sbjct: 1 MFQPVVLFIGLRYSRARQGSAFTAFINRFAFAGIALGVMALVVVMSVMNGFEGQLKERIL 60
Query: 63 GINGHVVIQQKYYPL--VDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
G V + +++ +L + + +P+V Q + +
Sbjct: 61 GAVPQVTLTDADSTTELTNWRKTQEQLPELEAIKGSMPYVQTQGILQFSEKMSVANIQGI 120
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
++ L G+ + +IIG+ LA+ GI++GD I I++ G V
Sbjct: 121 YPDAGEVPLSLEDKMVVGDWLSLTPGSYHLIIGQRLAQKQGITVGDNIRIIAAQGGVYTP 180
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEK 239
+ S+ V+ F + D +V+ + L VSG+++F+ D +
Sbjct: 181 FGLVPSQRRFVVTGFFSMGSEVDESVVFAHGSDLARLIRLPEGKVSGLQLFLDDAFKAPQ 240
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCY 268
E++ + DW+Q Y F
Sbjct: 241 VAESLRNK--TQLTTSDWRQNYGQLFEAV 267
>gi|209809472|ref|YP_002265010.1| lipoprotein releasing system, transmembrane protein [Aliivibrio
salmonicida LFI1238]
gi|208011034|emb|CAQ81448.1| lipoprotein releasing system, transmembrane protein [Aliivibrio
salmonicida LFI1238]
Length = 402
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 64/268 (23%), Positives = 113/268 (42%), Gaps = 7/268 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RYL + F S++S G+ IGV++L+ V+SVMNGF + R+L
Sbjct: 1 MFHPVSVFIGLRYLRGRSGDRFSRFISYMSTAGITIGVLSLVTVLSVMNGFEGQLKDRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ VI + ++ N + +P V +V P V G+A + +G+LV
Sbjct: 61 GVLPQAVISSESDQIIPSDDDRNYVASLPHVTQVTPVVRGEAIIQSAKGLSAGMLVGIDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM-G 181
+ ++ GN+ G+ +G LAR L + GD + I+ G
Sbjct: 121 DEYD---PIAYELISGNIRQLAAGEYGIFLGSKLARELNVRYGDTVRIMVTNASQYTPLG 177
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+++ V+G+F MV A+L + ++G +F DP + +
Sbjct: 178 RIPSQRNFKVVGVFNTGSDVDGQLMVANIQDTARLMKLKKGNITGWRLFFDDPFQVTELA 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L N + DW+ + F +
Sbjct: 238 KL---PLKNEMTWSDWRDQRGELFQAVK 262
>gi|119478446|ref|ZP_01618431.1| ABC-type transport system, involved in lipoprotein release,
permease component [marine gamma proteobacterium
HTCC2143]
gi|119448532|gb|EAW29779.1| ABC-type transport system, involved in lipoprotein release,
permease component [marine gamma proteobacterium
HTCC2143]
Length = 414
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 71/267 (26%), Positives = 128/267 (47%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ F + + RY S +K+ FIS S IS +G+++GV AL+VVMSVMNGF ++ R+L
Sbjct: 1 MYQPFSLFIGLRYTRSGKKSQFISFVSLISLLGMVLGVAALVVVMSVMNGFEGELRGRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ L D+ ++++ V+ P++ G +S +
Sbjct: 61 AVVPHGFIEGGGKRLGDWPRWKSQVEQGEGVVAAAPYIDGTVMLSRPKQVRGARMYAIDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + S G+++ ++IG ++R +G IGD+I ++ P VTPMG+
Sbjct: 121 QFEKRVSKIGDSMISGDLNGLQAGRYNMVIGDIVSRYMGAYIGDEITVVLPRVTVTPMGI 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K + V G+F++ D+ V++ LQ+ Q F + ++V+G+ + D +K
Sbjct: 181 FPRQKRFRVSGIFKVGADL-DSNTVFIHLQDGQKLFQMGDSVNGLRLQFDDLFMADKYLA 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L + W Q F E
Sbjct: 240 ALTESLPDKSTTTSWAQTQGSLFRAVE 266
>gi|86137437|ref|ZP_01056014.1| lipoprotein releasing system transmembrane protein LolE
[Roseobacter sp. MED193]
gi|85825772|gb|EAQ45970.1| lipoprotein releasing system transmembrane protein LolE
[Roseobacter sp. MED193]
Length = 428
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 84/275 (30%), Positives = 134/275 (48%), Gaps = 11/275 (4%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+RFE ++AWRYL + R +S+ ++IS IG+ + V ALI ++V +GFR + + +LG
Sbjct: 8 FARFEWMIAWRYLRARRAEGGVSVMTWISLIGITLAVFALIATLAVRSGFRSEFVGTILG 67
Query: 64 INGHVVIQ---------QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
N HV + + D+ +A R+ +P VI+ P V GQ +
Sbjct: 68 ANAHVTLYAHGELNEAGHFERYIKDFDEMAARVAQVPGVIRAAPLVKGQVMANARQRNAG 127
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ + ++ G + + +GV IG +AR LG+S+GD+I ++SP
Sbjct: 128 VEVFGIAKAGIMTI--PGVAQSDGAIGDLDLFQEGVAIGSGVARELGVSVGDRIKLISPN 185
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G TP G R K+Y V+ +F D D +YM EAQ +FN E IEV ++DP
Sbjct: 186 GVKTPFGTSPRVKAYEVVYIFTAGRYDIDRTRLYMPFGEAQSFFNREGVADEIEVMIEDP 245
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ ++ ++R G V V W+ F E
Sbjct: 246 EGVDLKVLPLLRAAGGAVGVWTWRDASGGFLRALE 280
>gi|146276454|ref|YP_001166613.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Rhodobacter sphaeroides ATCC 17025]
gi|145554695|gb|ABP69308.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Rhodobacter sphaeroides ATCC 17025]
Length = 428
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 81/274 (29%), Positives = 130/274 (47%), Gaps = 11/274 (4%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE ++AWRYL + R +S+ ++IS +G+ + V ALI +SV GFR + + +LG
Sbjct: 8 FAAFEWMIAWRYLRARRAEGGVSVMTWISLVGITLAVFALIATLSVRAGFRAEFVDTILG 67
Query: 64 INGHVVIQ---------QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
N HV + Q D+ +A RL +P V++ P V GQ +
Sbjct: 68 ANAHVTVYSAGQVSETGQLIRGFDDFDPVAERLRTVPGVVRAAPVVKGQVMATASGRSSG 127
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ + G+V + +G+ IG +A+ LG+++GD+I ++SP
Sbjct: 128 VEVFGMRQADLATI--PRIGHGSGHVGDVGRFDEGIAIGSGVAQELGVTVGDRIRLISPD 185
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G T G R +Y V+ +F D D +YM L EAQ YFN E IEV V DP
Sbjct: 186 GVKTAFGTSPRVSAYEVVYVFTAGRYDIDRTRIYMPLAEAQSYFNREGRADEIEVMVTDP 245
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+A++ +++ G G ++ W+ F
Sbjct: 246 EAVDAMGPALMQAAGEGSMLWTWRDSAGAFLRAL 279
>gi|303328116|ref|ZP_07358555.1| lipoprotein releasing system, permease protein [Desulfovibrio sp.
3_1_syn3]
gi|302861942|gb|EFL84877.1| lipoprotein releasing system, permease protein [Desulfovibrio sp.
3_1_syn3]
Length = 411
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 79/268 (29%), Positives = 130/268 (48%), Gaps = 3/268 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
FE+ VA RYLFS RK FI I S +S +GV IGV AL+VV+ V NG DM ++LG
Sbjct: 4 MSFELFVALRYLFSRRKQTFIYIISLMSILGVAIGVGALVVVLGVYNGLTTDMRDKILGA 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N H ++ ++ + D + + G GV++RGI +
Sbjct: 64 NAHAIVMSYVPSAFEHDQDLTQRIRSVDGVTGATPFIYTEVMLSAGGGVKGVVLRGIDPA 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRG--KGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + D + G+IIG++LAR LG++ G ++N+LSP G T G
Sbjct: 124 SAPEVLSLLHQMRSGSPEDLQKEGTPGIIIGEELARRLGLAAGSRVNLLSPSGQKTASGY 183
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
R + + V+G+F+ +YD+ + +++L A+ L +SGIE+ V+D ++
Sbjct: 184 SPRIRPFEVVGIFKTGMFEYDSSLAFVTLNAARDVLGLPPGFLSGIEITVRDVFKADQVA 243
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ LG+ V W + F+ +
Sbjct: 244 ARLSTELGSPFYVRTWMEMNANLFAALK 271
>gi|261253313|ref|ZP_05945886.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
orientalis CIP 102891]
gi|260936704|gb|EEX92693.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
orientalis CIP 102891]
Length = 414
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 60/267 (22%), Positives = 108/267 (40%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS +A R+ ++N +S S S IG+ +GV +I+ +S MNGF ++ RVL
Sbjct: 1 MFSSLSHFIARRFSRGKQRNKMVSFISMSSTIGIAVGVAVIIIGLSAMNGFERELNNRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + PLV++Q + + + P + P+V A + + +
Sbjct: 61 SVISHGEFEGVRGPLVEWQQVVTQAEKHPKIEAAAPYVKLTALAEKGTQLKAIEVRGIDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S ++ + I+GK +A LG+ GD + ++ P G T +
Sbjct: 121 EQEGRVSSLSDFIDPSVWASFKAGQQQAILGKGVADLLGVKKGDYLTLMIPTGGATTK-V 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + + L +AQ Y L VSG+ V V D +
Sbjct: 180 QAPKRVRVKVAGLLTLNGQIDHNLALIPLADAQSYAKLGQGVSGVAVKVTDVLEATQIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
L V + WQQ+Y + +
Sbjct: 240 EAGNTLSVYVYLRSWQQKYGFLYRDIQ 266
>gi|163857076|ref|YP_001631374.1| lipoprotein releasing system permease component [Bordetella petrii
DSM 12804]
gi|163260804|emb|CAP43106.1| lipoprotein releasing system permease component [Bordetella petrii]
Length = 426
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 68/276 (24%), Positives = 132/276 (47%), Gaps = 12/276 (4%)
Query: 6 RFEVIVAWRY-------LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMI 58
+E+ + RY R++ FIS + S G+ +GV ALIVV+SVMNGF++++
Sbjct: 5 PYELWIGARYAGMARIRQRRGRRDRFISFIAATSMAGIALGVAALIVVLSVMNGFQKEVR 64
Query: 59 KRVLGINGHVVIQQ----KYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
R+L + H+ + L ++ A+ + P+V PFV+ QA ++ +
Sbjct: 65 DRMLSVLPHIELYIPGAVPERVLEQWRQFADAAERNPEVKGAAPFVAAQAMLARGQALRG 124
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ ++ G +++ G GV++G DLA LG+ +GD + +L+P
Sbjct: 125 VQVRGIDPVTEGQVSDIPRQMTSGKLADLKPGGFGVVLGSDLADGLGVQVGDTLLMLAPQ 184
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G ++P G R + +TV+G F +YD+ + ++ ++A F G+ + V+D
Sbjct: 185 GSISPAGFTPRMRQFTVVGTFTSGHYEYDSSLAFVDDEDAARVFRDSGTA-GVRLRVQDM 243
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ + + L V+ DW + + +F+ ++
Sbjct: 244 QRAPQVAAELSKTLPPYVMASDWSRNNRTWFAAVQT 279
>gi|121601808|ref|YP_989087.1| ABC transporter, permease protein [Bartonella bacilliformis KC583]
gi|120613985|gb|ABM44586.1| ABC transporter, permease protein [Bartonella bacilliformis KC583]
Length = 422
Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats.
Identities = 106/266 (39%), Positives = 162/266 (60%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS ++ ++A RY+ N+K+ F SI S IS IG+M+GV AL+VVM+VMNGFR +++ R+LG
Sbjct: 9 FSSYQWMIALRYMIPNKKHMFTSIISIISLIGIMLGVFALVVVMAVMNGFRTELLNRILG 68
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGH+VIQ DY + + L+ + V LP + GQA V G GG+G L+RG
Sbjct: 69 MNGHLVIQTMDSDFSDYNTLIHSLESLNSVQFALPIIEGQALVQGNIGGGTGALIRGTRK 128
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D L+ FD+ +GV IG LA LG++IG + +++P GD TP G+
Sbjct: 129 EDLEKLKTVAQNIKSGSLAQFDQEEGVAIGSGLAEKLGLTIGSDLRMITPDGDETPFGVM 188
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K+Y V+ +F + +YD+ ++M L EAQ +FNL + +E+F+ DPDAI++
Sbjct: 189 PRVKAYKVVAIFEVGMSEYDSIFIFMPLHEAQAFFNLGTTIQSLELFLHDPDAIDQVKPV 248
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
I++ + V ++DW+ R Q FFS +
Sbjct: 249 IMKEIDQPVYLVDWRIRNQAFFSALQ 274
>gi|187251715|ref|YP_001876197.1| putative ipoprotein releasing system [Elusimicrobium minutum
Pei191]
gi|186971875|gb|ACC98860.1| Putative lipoprotein releasing system [Elusimicrobium minutum
Pei191]
Length = 409
Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats.
Identities = 74/270 (27%), Positives = 131/270 (48%), Gaps = 6/270 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
RFE+ VA RYL S RK F I + I GV +GV ALI ++VM GF+ D+ ++V+G
Sbjct: 1 MRFELFVAKRYLNSKRKGLFALITTIIGIAGVTVGVAALITTLAVMTGFQTDIKEKVIGA 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H++I YQ +++ +P V P + GQ ++ S + VL
Sbjct: 61 QSHILIFGH-MTEAVYQDKIKKIEQLPLVYAAAPNIFGQGIITHNGSSLAIVLRGLEPEM 119
Query: 125 DFSYLQNSFSRFYGNV-----SNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + + S G+ + +++G +LA +L + +GD + ++SP T
Sbjct: 120 EDKVNRLNSSFEEGSYVAPLREGETSAPAPLVLGTELANSLNLEVGDDVVLISPSSISTS 179
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
GM + K + + G + + ++D M Y +L+ A + NL+ +GI + +K+ D EK
Sbjct: 180 AGMVPKMKKFRISGTIKTGYYEFDRTMGYTTLEHASEFLNLQKGATGISIRLKNIDNAEK 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I I+GNG + + Q ++ +
Sbjct: 240 AAKLIRPIMGNGFSIRTFAQLNGTLYAALK 269
>gi|85708822|ref|ZP_01039888.1| ABC-type transport system [Erythrobacter sp. NAP1]
gi|85690356|gb|EAQ30359.1| ABC-type transport system [Erythrobacter sp. NAP1]
Length = 412
Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats.
Identities = 76/267 (28%), Positives = 129/267 (48%), Gaps = 3/267 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + FE ++A RYL+ + FI++ + IS VM+ V L++VMSVM GFR +M+++
Sbjct: 1 MLTPFERMIAKRYLWPGKGEGFIALVAGISVGVVMLSVAMLVLVMSVMGGFRTEMLEKFS 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+NGH +IQ L ++ + + V P + Q V+ ++ + V VRG +
Sbjct: 61 GLNGHAIIQAYGGELDGWERVVEEVRATEGVTDASPLI-EQPLVASVNGRLNPVFVRGNT 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
D + + + +G++S+ V IG LA N+G +GD + +++P G TP G
Sbjct: 120 PEDLALISDKV--LFGDISSLQPDAGRVAIGSRLAANMGARVGDTVTLINPSGRTTPFGT 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R Y V + D+D V M + +AQ + + + I V V DPD +
Sbjct: 178 TFRQVPYEVGAIVEFGLYDFDEKFVVMPMSDAQTLLLMGDTIGLIRVNVTDPDNVSGILG 237
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + L + DW+Q F E
Sbjct: 238 AVEQDLTGRAQIADWKQINSTLFEALE 264
>gi|317491830|ref|ZP_07950265.1| LolC/E family lipoprotein releasing protein [Enterobacteriaceae
bacterium 9_2_54FAA]
gi|316920264|gb|EFV41588.1| LolC/E family lipoprotein releasing protein [Enterobacteriaceae
bacterium 9_2_54FAA]
Length = 399
Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats.
Identities = 61/268 (22%), Positives = 110/268 (41%), Gaps = 7/268 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL++V+SVMNGF D+ +L
Sbjct: 1 MYQPVALFIGLRYMRGRASDRFGRFVSWLSTIGITLGVMALVIVLSVMNGFERDLENNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ +I + Q A + + + V +V P + L S S + +
Sbjct: 61 GLMPQALITSTQGSINPEQVPATQFEHLAGVKRVAP---LTTGNAVLQSAHSVAVGVILG 117
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S N+ VI+G LA LG+ G+K+ I+ P
Sbjct: 118 VNPNEKEPLSAYLNGSNLQALQPGQYNVILGDQLAGQLGVKRGEKLRIMVPSASQFTPMG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + M+ Q+A ++G V++ P AI+
Sbjct: 178 RIPSQRVFNVVGTFSADSEVDQYQMLMNQQDASRLMRYPLGNITGWRVYMDKPLAIDAL- 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + L G+ DW++R F +
Sbjct: 237 --VSQPLEKGLEWKDWRERKGELFQAVK 262
>gi|262165992|ref|ZP_06033729.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
mimicus VM223]
gi|262025708|gb|EEY44376.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
mimicus VM223]
Length = 414
Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats.
Identities = 55/267 (20%), Positives = 111/267 (41%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS + + R+ + ++N +S S S IG+ +GV +I+ +S MNGF ++ RVL
Sbjct: 1 MFSSLALFIGGRFSRAKQRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQSRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + P+ + + + P ++ P+V A + + +
Sbjct: 61 SVIPHGEFEGVRGPVQRWPDLMAQAASHPQILAAAPYVKMTALAENGTQLKAIEVRGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + S N + VI+G+ +A LG+ +GD I ++ P
Sbjct: 121 QREQAVSRLSQFITPQAWQNFIPGQQQVILGQGVADKLGVQVGDFITLMIPSATSGEKVQ 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + + L++AQ Y NL + V+G+ V V + +
Sbjct: 181 APKRVRV-KVSGLLTLNGQIDHSLALLPLEDAQSYANLGSGVTGVSVKVNNVLQATQIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ L V + WQQ+Y + +
Sbjct: 240 DVGNQLNEYVYLHSWQQKYGFLYRDIQ 266
>gi|258621372|ref|ZP_05716406.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|258586760|gb|EEW11475.1| conserved hypothetical protein [Vibrio mimicus VM573]
Length = 414
Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats.
Identities = 55/267 (20%), Positives = 111/267 (41%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS + + R+ + ++N +S S S IG+ +GV +I+ +S MNGF ++ RVL
Sbjct: 1 MFSSLALFIGGRFSRAKQRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQSRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + P+ + + + P ++ P+V A + + +
Sbjct: 61 SVIPHGEFEGVRGPVQRWPDLMAQAASHPQIVAAAPYVKMTALAENGTQLKAIEVRGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + S N + VI+G+ +A LG+ +GD I ++ P
Sbjct: 121 QREQAVSRLSQFITPQAWQNFIPGQQQVILGQGVADKLGVQVGDFITLMIPSATSGEKVQ 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + + L++AQ Y NL + V+G+ V V + +
Sbjct: 181 APKRVRV-KVSGLLTLNGQIDHSLALLPLEDAQSYANLGSGVTGVSVKVNNVLQATQIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ L V + WQQ+Y + +
Sbjct: 240 DVGNQLNEYVYLHSWQQKYGFLYRDIQ 266
>gi|163784865|ref|ZP_02179640.1| hypothetical protein HG1285_04248 [Hydrogenivirga sp. 128-5-R1-1]
gi|159879866|gb|EDP73595.1| hypothetical protein HG1285_04248 [Hydrogenivirga sp. 128-5-R1-1]
Length = 405
Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats.
Identities = 62/266 (23%), Positives = 124/266 (46%), Gaps = 2/266 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ +A RYL S + +S S IS IG+ +GV AL++ ++V++GF+ + +++L
Sbjct: 1 MPLYIKIALRYLLSLKSK-ALSFMSLISLIGITVGVSALLITLAVLSGFQFGLKEKILQT 59
Query: 65 NGHVVIQQKYYPLVDYQFIAN-RLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
H VI + + ++ + I+ ++ + + +RG+
Sbjct: 60 TPHAVIMKIANKFWEDEYKEILQKFKDFSEIQGSEPFIYSQALASVGKNVQSIFIRGVIP 119
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ R ++ K +IGKDLA L + +GDKIN++SP+G TP+G
Sbjct: 120 EKDKKIMAVDKRVIAGNFDELKNPKTAVIGKDLAFILDVDVGDKINLISPFGQKTPLGYM 179
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ V+ + +YD+ V ++L++AQ + N+ ++G+++ +KDP + E
Sbjct: 180 PKIMQVKVVAIVDFGMYEYDSSYVSLNLKDAQKFLNMNGQITGVQLKLKDPYQAQVVKEK 239
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ +I +V W + F +
Sbjct: 240 LEKIFDFPYMVRTWIDMNKSLFQALK 265
>gi|149192124|ref|ZP_01870346.1| outer membrane-specific lipoprotein transporter subunit LolE
[Vibrio shilonii AK1]
gi|148834027|gb|EDL51042.1| outer membrane-specific lipoprotein transporter subunit LolE
[Vibrio shilonii AK1]
Length = 412
Score = 132 bits (330), Expect = 6e-29, Method: Composition-based stats.
Identities = 48/265 (18%), Positives = 97/265 (36%), Gaps = 1/265 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ R+ + ++N +S S S +G+ +GV +++ +S MNGF ++ RVL +
Sbjct: 1 MSLSFFIGKRFSKAKQRNKMVSFISISSIVGIAVGVAVIVIGLSAMNGFERELKNRVLSV 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H + P+ ++Q + + V P++ A V S V +RG+
Sbjct: 61 IAHGEFEGVNAPIKNWQKVMDSAMEHSKVEAAAPYIRMTALVEKGSL-LKAVEIRGVDPE 119
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + G +F G+ +I + + L +
Sbjct: 120 LETKVSTLPGFVKGTAWQNFHAGEQQVILGKGVADQVDAKVGDYVTLMIPTTSNTSKVQA 179
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + D+ + + L +AQ Y L N V+G+ + V D +
Sbjct: 180 PRRVRVQVSGLLELNGQIDHSLAIVPLADAQQYARLGNQVTGVSIKVDDVFNAPLIVREV 239
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
L V + W+Q+Y + +
Sbjct: 240 GNTLTEYVYLRSWKQKYGFLYRDIQ 264
>gi|146293250|ref|YP_001183674.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Shewanella putrefaciens CN-32]
gi|145564940|gb|ABP75875.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella putrefaciens CN-32]
gi|319426236|gb|ADV54310.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella putrefaciens 200]
Length = 416
Score = 132 bits (330), Expect = 6e-29, Method: Composition-based stats.
Identities = 58/268 (21%), Positives = 109/268 (40%), Gaps = 1/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + WR+ + + N+FIS SF S G+ +GV LIVV+S MNGF ++ +R+L
Sbjct: 1 MKGPLALSIGWRFYRARQSNSFISFISFASTAGIALGVAVLIVVLSAMNGFERELEQRLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ I P+VD+Q +A I + PF+ Q V +V
Sbjct: 61 GVIPQADIVGVNEPIVDWQSVAEGALQIEGIRGAAPFIRIQGLVQKPGGFQGLSVVGIAP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + + +++GK L + LG+ IGD + + D G
Sbjct: 121 EEETKVSTLAQFMTDESWQSLAQDENHIVLGKSLLKKLGLEIGDTLALYVQDMDPENAGS 180
Query: 183 GIRSKSYTVLGM-FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+KS+ + + + Y+ ++ A N++N V+G+ + V+
Sbjct: 181 LRAAKSHRFVVSGVYALGGELELTTAYIPMRYAAQILNMQNGVTGVRISVEQVFDAPAKV 240
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ V + DW + + +
Sbjct: 241 RELGYAQKQSVYISDWTRTQGHLYQDIQ 268
>gi|330829922|ref|YP_004392874.1| lipoprotein releasing system, transmembrane protein LolE [Aeromonas
veronii B565]
gi|328805058|gb|AEB50257.1| Lipoprotein releasing system, transmembrane protein LolE [Aeromonas
veronii B565]
Length = 413
Score = 132 bits (330), Expect = 6e-29, Method: Composition-based stats.
Identities = 54/267 (20%), Positives = 97/267 (36%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY S R+N FI+ S S IG+ +GVMALI+ +S MNGF ++ RVL
Sbjct: 1 MFKPLPLFLGLRYSRSRRRNGFIAFISASSLIGIALGVMALILGLSAMNGFERELKDRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ + PL D+ + + L P V P + + S+ GV +R +
Sbjct: 61 SVVPQGELDAVERPLPDWPRLRDYLLAQPGVEAAAPVIRLNGLLEHGSA-LKGVQLRAVL 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ L ++ G + G+ +I + L G+
Sbjct: 120 PDLEANLSDAGKYMTGRGLRELQPGERGVILGKTIADKLGVKVGDSVALLLPQGGDQAGI 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D + +M L +AQ + + V G + V D +
Sbjct: 180 KNPRREALTVVGLLEIGGQLDGLLGFMHLADAQAITGMGSDVEGFSLRVSDVLNAQNITI 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + V + W + +
Sbjct: 240 AAAQQFPHHVYIRSWMNSQGYLYQDIQ 266
>gi|197337122|ref|YP_002158060.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
fischeri MJ11]
gi|197314374|gb|ACH63823.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
fischeri MJ11]
Length = 402
Score = 132 bits (330), Expect = 6e-29, Method: Composition-based stats.
Identities = 64/268 (23%), Positives = 111/268 (41%), Gaps = 7/268 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RYL + F S++S G+ IGV++L+ V+SVMNGF + R+L
Sbjct: 1 MFHPVSVFIGLRYLRGRSGDRFSRFISYMSTAGITIGVLSLVTVLSVMNGFEGQLKDRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ VI + + +P V +V P V G+A + +G+LV
Sbjct: 61 GVLPQAVISSTDNQITPLDDEREYVASLPHVTQVTPVVRGEAIIQSARGLSAGMLVGIDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM-G 181
N ++ GNV G+ +G LAR L + GD + I+ G
Sbjct: 121 NEYD---PIAYELISGNVRQLAAGEYGIFLGSKLARELSVRYGDTVRIMVTNASQYTPLG 177
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+++ V+G+F MV A+L + ++G +F +DP + +
Sbjct: 178 RIPSQRNFKVVGVFNTGSDVDGQLMVANIQDTARLMKLKKGNITGWRLFFEDPFQVTELA 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L + + DW+ + F +
Sbjct: 238 KI---PLEHDMTWSDWRDQRGELFQAVK 262
>gi|94970594|ref|YP_592642.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Candidatus Koribacter versatilis Ellin345]
gi|94552644|gb|ABF42568.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Candidatus Koribacter versatilis Ellin345]
Length = 423
Score = 132 bits (330), Expect = 6e-29, Method: Composition-based stats.
Identities = 68/282 (24%), Positives = 123/282 (43%), Gaps = 18/282 (6%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+FE+ +A RYL + R+ A I + + IS IGV GV +LI+ +++ NGFR D+ R+LG
Sbjct: 1 MKFELFIATRYLRAKRRQAVIGVITGISIIGVAAGVASLIIALAINNGFRSDLQARLLGS 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H+ + + + + + + + G L++GI +
Sbjct: 61 MSHINLMRLQNDGIKNWRDLLAKLEKQPHVVAGAPAIYEQVLISRGARAQGALLKGIVPA 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKG------------------VIIGKDLARNLGISIGD 166
D + ++ D + +++GKD+A LG + G
Sbjct: 121 DERRVSALLDNVKFGSADALDSSQNGEGAPKTLSDEVTQSLPPIVLGKDMADTLGATTGS 180
Query: 167 KINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSG 226
+ + SP G++TP G+ + + + V+G+F F DYD+ L +AQ F L + V
Sbjct: 181 VVLVTSPQGELTPFGIVPKYQRFKVVGIFESGFYDYDSSWGLTRLDDAQKLFGLGDIVPV 240
Query: 227 IEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+E V D + + +V + G G +W ++ Q F
Sbjct: 241 LEFKVDDIYKAPQIADQLVDVAGQGFGAKNWMEQNQALFRAL 282
>gi|260776191|ref|ZP_05885086.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
coralliilyticus ATCC BAA-450]
gi|260607414|gb|EEX33679.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
coralliilyticus ATCC BAA-450]
Length = 414
Score = 132 bits (330), Expect = 7e-29, Method: Composition-based stats.
Identities = 58/267 (21%), Positives = 102/267 (38%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS + + R+ + ++N +S S S IG+ +GV +I+ +S MNGF ++ RVL
Sbjct: 1 MFSSLSLFIGGRFSRAKQRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELKDRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + P+ ++Q + + + P V P+V A + VRGI
Sbjct: 61 SVIAHGEFEGVRGPIEEWQSVIEQAEKHPKVEAAAPYVKITALAEKG-QQLKALEVRGID 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S + N V + F G +I +L L + +
Sbjct: 120 PDKESAVSNMSQYIDKAVWSQFKAGDKQVILGQGVADLLGVSRGDYITLMIPTSGSATKV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + + LQ+AQ Y L AV+G+ + V D +
Sbjct: 180 QAPKRVRVRVAGLLKLNGQIDHNLALVPLQDAQQYAKLGEAVTGVSLKVSDVLNATQIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
L V + WQQ Y + +
Sbjct: 240 EAGNTLNVYVYLRSWQQNYGFLYRDIQ 266
>gi|113970072|ref|YP_733865.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Shewanella sp. MR-4]
gi|113884756|gb|ABI38808.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella sp. MR-4]
Length = 416
Score = 132 bits (330), Expect = 7e-29, Method: Composition-based stats.
Identities = 54/268 (20%), Positives = 104/268 (38%), Gaps = 1/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + WR+ + + N+FIS SF S G+ +GV LIVV+S MNGF ++ +R+L
Sbjct: 1 MKGPLALSIGWRFYRARQSNSFISFISFASTAGIALGVAVLIVVLSAMNGFERELEQRLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ + P+ D++ + I + PF+ Q V +V
Sbjct: 61 GVISQADVVGVNEPIADWRAVEQTAMQIEGITAAAPFIRMQGLVQKPGGFQGLAVVGIDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S + +++G+ L + LG+ +GD + + D G
Sbjct: 121 EQEAKVSTLSQFMSKETWQGLGEDDNHIVLGESLLKKLGLEVGDTLALYVQDLDPEHAGS 180
Query: 183 GIRSKSYTVLGM-FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+KS+ + + + Y+ ++ A NL V+G+ + V
Sbjct: 181 LRAAKSHRFVVSGVYRLGGELELTTAYIPMRYAANILNLHQGVTGVRISVAQVFDAPAKI 240
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L V + DW + + +
Sbjct: 241 RELGYALNQSVYISDWTRTQGHLYQDIQ 268
>gi|126725671|ref|ZP_01741513.1| lipoprotein releasing system transmembrane protein LolE
[Rhodobacterales bacterium HTCC2150]
gi|126704875|gb|EBA03966.1| lipoprotein releasing system transmembrane protein LolE
[Rhodobacterales bacterium HTCC2150]
Length = 428
Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats.
Identities = 85/274 (31%), Positives = 130/274 (47%), Gaps = 9/274 (3%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FSRFE ++AWRYL + R IS+ ++IS IG+ + V ALI ++V +GFR + + +LG
Sbjct: 8 FSRFEWMIAWRYLRARRSEGGISVMTWISLIGIALAVFALIATLAVRSGFRSEFVDTILG 67
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKV--------LPFVSGQAFVSGLSSGGSG 115
N HV + + D+ +V + + + L + +G
Sbjct: 68 ANAHVAVYSPLRVDEFGKTTRLIADYDEMAERVRAVDGVVRVAPILKGEVLVSLRNRSAG 127
Query: 116 VLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYG 175
V + G+S +D L + + +G+ IG +AR LG +GD+I ILSP G
Sbjct: 128 VQIYGMSPNDLLSLPGMVNSDQAIGDINRFG-EGLAIGSGVARQLGAGLGDRIKILSPDG 186
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD 235
T G R K+Y + +F + D D +YM L EAQ +FN E V +EV V P+
Sbjct: 187 VKTAFGTSPRVKTYEITYIFSLGRYDIDRVRIYMPLTEAQSFFNAEERVEELEVMVDRPE 246
Query: 236 AIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
IE+ I+R G ++ WQ F E
Sbjct: 247 LIEQYELPILRAAGTDAILWTWQDSSGSFLRALE 280
>gi|89070122|ref|ZP_01157451.1| ABC lipoprotein efflux transporter, inner membrane subunit, LolE
[Oceanicola granulosus HTCC2516]
gi|89044239|gb|EAR50385.1| ABC lipoprotein efflux transporter, inner membrane subunit, LolE
[Oceanicola granulosus HTCC2516]
Length = 440
Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats.
Identities = 75/284 (26%), Positives = 127/284 (44%), Gaps = 19/284 (6%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE +AWRY+ + R +S+ ++IS +G+ + V ALI ++V +GFR++ + ++G
Sbjct: 8 FAPFEWKIAWRYIRARRAEGGVSVMTWISLVGISLAVFALIATLAVRSGFRQEFVDTIVG 67
Query: 64 INGHVVIQQ-------------------KYYPLVDYQFIANRLDFIPDVIKVLPFVSGQA 104
N H+ ++Q + DY +A RL + V + V G+
Sbjct: 68 ANAHLAVRQQTQETVTVTQGDQSVDVTRWVDTISDYPDLAARLAALEGVERANSVVRGEG 127
Query: 105 FVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISI 164
S + DF GV +G +AR LG+S+
Sbjct: 128 LASRGEEATFVQIYGISPEELADVPLIRAPEQSSGRLADFGGESGVALGSGVARALGVSV 187
Query: 165 GDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAV 224
G++I + + G T +G R S+ V+ +F+ D VYM L++AQ +FN +AV
Sbjct: 188 GERITLTTAAGVQTAVGRSPRRASFDVVYIFQTGRYATDVVRVYMPLEKAQDFFNRGDAV 247
Query: 225 SGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
IEVFV DPD +E+ + L G ++ W+ +
Sbjct: 248 DEIEVFVTDPDNVEQWISPVYAQLEPGSLLYSWKDNEGAYLRAL 291
>gi|262275600|ref|ZP_06053409.1| lipoprotein releasing system transmembrane protein LolE [Grimontia
hollisae CIP 101886]
gi|262219408|gb|EEY70724.1| lipoprotein releasing system transmembrane protein LolE [Grimontia
hollisae CIP 101886]
Length = 414
Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 105/267 (39%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + R+ + R+N +S S S IG+ +GVM +IV +S MNGF ++ RVL
Sbjct: 1 MIDSLALFIGRRFSKAKRRNKLVSFISVSSMIGISVGVMVIIVGLSAMNGFERELNNRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H ++ P+ +Q + + P V P+V+ A + + V +RG+
Sbjct: 61 AVIPHAELEGVDAPVKAWQEMKVTAEANPKVSAGAPYVTFTALLEKG-ASLKPVQIRGVD 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S + N N + G ++ + + +
Sbjct: 120 PVQESRVSNIGDYVLDNAWSTLKPGSNAVVLGKGIADNLNVGVGDWVTALVPSPDPELKL 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+G+ + +Q+AQ Y ++ +AVSG+ + V +P
Sbjct: 180 RAPQRIRLQVSGILSLGGQVDHGLALVPIQDAQQYLDMGDAVSGVALRVIEPLEARAIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + L V + +W Q Y + +
Sbjct: 240 EVGQTLKEYVYLKNWTQEYGFLYRDIQ 266
>gi|83858392|ref|ZP_00951914.1| hypothetical protein OA2633_02796 [Oceanicaulis alexandrii
HTCC2633]
gi|83853215|gb|EAP91067.1| hypothetical protein OA2633_02796 [Oceanicaulis alexandrii
HTCC2633]
Length = 444
Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats.
Identities = 84/278 (30%), Positives = 145/278 (52%), Gaps = 12/278 (4%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FSR+E ++A++YL + RK+ +++ S ISF+G+M+ V LI VMSVMNGFR +++ R+LG
Sbjct: 19 FSRYEFLLAFKYLRARRKHGGVTLISVISFVGIMLAVAVLITVMSVMNGFRHELLTRLLG 78
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ HV + + +A+R+ + V + P +GQA V+ S +
Sbjct: 79 VQPHVYVMVPADQGELSRTLADRIRALDGVRQAGPVATGQALVTSGRSAAFASVSGVRPE 138
Query: 124 SDFSYLQNSFSRFYGN------------VSNDFDRGKGVIIGKDLARNLGISIGDKINIL 171
+ + + + + G +I+G +A LG+ +GD++ ++
Sbjct: 139 DLARFDLITGAHGADDAGGGLAAGSIDRFGEGRNGGDVIIMGTVMANQLGVGVGDQVTLV 198
Query: 172 SPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFV 231
SP G T +GM RSK YT+ G+ + D D ++YM L +A L+FN I+V +
Sbjct: 199 SPQGATTALGMTPRSKRYTIGGLLSVGVQDLDQVLIYMPLDQASLFFNKPAQGEYIDVRI 258
Query: 232 KDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+PDA E E I + G V+ DW+++ Q F++ +
Sbjct: 259 ANPDAPEPVMEQIRAMAPQGAVIFDWRRQNQAFWNALQ 296
>gi|114798078|ref|YP_760469.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Hyphomonas neptunium ATCC 15444]
gi|114738252|gb|ABI76377.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Hyphomonas neptunium ATCC 15444]
Length = 423
Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats.
Identities = 70/270 (25%), Positives = 125/270 (46%), Gaps = 3/270 (1%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F + E +AWRYL + R++ S+ + ISFIG+ V ALI+ MS+M+GFR ++ +LG
Sbjct: 7 FGKLERTLAWRYLRARREHGGASLIAVISFIGIFFAVAALIITMSIMSGFRATLLDALLG 66
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQ---AFVSGLSSGGSGVLVRG 120
H+ P + + +A + PDVI P++ + + G +
Sbjct: 67 GEPHISAAVDGMPQDEAEALAKIISETPDVISASPYIEQFVLLSANGVRTGGVVRAVPPA 126
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + + G ++IG+ LA NLG+ GD + +++ P+
Sbjct: 127 DLKTMPILKDGGEAALAAGFGQGRNGGNVIMIGQYLAANLGLQPGDSVEVVTSQMRSGPL 186
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G SKSY V +FR DN V+M + +AQ+ F + +++ VK+PD E
Sbjct: 187 GQTPISKSYVVGDIFRTGSAQLDNVYVFMPMNQAQILFQSKGRYQFLDIRVKNPDMTEVA 246
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ I G +++ DW+ + + + +
Sbjct: 247 MQRISEATGYSLLLRDWKTKNRTYLGALRT 276
>gi|163802115|ref|ZP_02196011.1| hypothetical protein 1103602000573_AND4_03819 [Vibrio sp. AND4]
gi|159174256|gb|EDP59064.1| hypothetical protein AND4_03819 [Vibrio sp. AND4]
Length = 414
Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats.
Identities = 51/267 (19%), Positives = 101/267 (37%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS +++ R+ + ++N +S S S IG+ +GV +I+ +S MNGF ++ RVL
Sbjct: 1 MFSSLALMIGGRFSRAKKRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQSRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H ++ PL +Y N+ V+ P+V S + VRG+
Sbjct: 61 SVIPHGELEGVNGPLHNYTKTMNQALSHEHVVAAAPYVRFTGLAEKG-SKLKAIEVRGVD 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + + F+ G+ +I L +
Sbjct: 120 PAFEQAVSSMSEFIAPEAWHSFNAGQQQVILGRGVAKELKVEIGDYITLMIPQTGGTNKV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + F D+ + + L++AQ Y L + V+GI + D
Sbjct: 180 QAPKRVRVKVSGFLTLNGQIDHSLALVPLKDAQAYARLGDGVTGISLKTDDVLNAPSIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + V + WQQ++ + +
Sbjct: 240 EVGSRIDVYVYLKSWQQQFGFLYRDIQ 266
>gi|85704334|ref|ZP_01035437.1| lipoprotein releasing system transmembrane protein LolE
[Roseovarius sp. 217]
gi|85671654|gb|EAQ26512.1| lipoprotein releasing system transmembrane protein LolE
[Roseovarius sp. 217]
Length = 428
Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats.
Identities = 77/275 (28%), Positives = 131/275 (47%), Gaps = 11/275 (4%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE ++AWRYL + R +S+ ++IS IG+ + V ALI ++V +GFR + + +LG
Sbjct: 8 FAAFEWMIAWRYLRAKRAEGGVSVMTWISLIGITLAVFALIATLAVRSGFRAEFVDTILG 67
Query: 64 INGHVVIQQ---------KYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
N HV + L DY +A+R+ +P V +V P V GQ +
Sbjct: 68 ANAHVTVYNSGSVDASGRVDRSLEDYAAMADRVRAVPGVTRVAPLVKGQVMANASDRNAG 127
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ + + + +G+ IG +A+ LGI++GD+I ++SP
Sbjct: 128 VQVYGITPEDLQTIPRVADPETSQGDI--ARFSQGIAIGSGVAQELGITLGDRIKLISPN 185
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G TP+G R +Y V+ +F D D Y+ +EAQ +FN + +EV V+DP
Sbjct: 186 GVKTPLGTSPRVNAYEVVYIFSAGRYDIDRVRAYLPFEEAQSFFNRDGRADELEVMVEDP 245
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ ++ +++ G ++ WQ F E
Sbjct: 246 ETVDSLTLPLLQAAGERAMLWTWQDASGSFLRALE 280
>gi|119774471|ref|YP_927211.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Shewanella amazonensis SB2B]
gi|119766971|gb|ABL99541.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella amazonensis SB2B]
Length = 420
Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats.
Identities = 50/264 (18%), Positives = 98/264 (37%), Gaps = 1/264 (0%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+ + +R+ + + N+FIS SF S G+ +GV LI+V+S MNGF ++ +R L +
Sbjct: 9 LSLWLGFRFYRARQSNSFISFISFASTAGIALGVAVLIIVLSAMNGFERELRERFLDVVP 68
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
H + P+ +Q + IP + PF+ Q LV ++ +
Sbjct: 69 HAELVGVNEPVHSWQAMVADASKIPGIRGAAPFIRLQGLAQRQGGFQGLSLVGIDTSLEG 128
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+++G+ L LG++ GD + + P G +
Sbjct: 129 QVSGIESYMPTDAWQALGQDENAIVLGRSLMEKLGLNEGDALVLFVPDLSGRQNGKLGAT 188
Query: 187 KSYTVLGM-FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+S+ + + + Y S+ + VSG+ + V D K +
Sbjct: 189 RSHKFVVRGSYHLGGELELVTAYASMAHLARVLEMGEDVSGVRIAVDDVFKAPKLIRELG 248
Query: 246 RILGNGVVVIDWQQRYQIFFSCYE 269
+ + DW + + +
Sbjct: 249 FTQSQYLYMSDWTRTQGHLYQDIQ 272
>gi|206602453|gb|EDZ38934.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Leptospirillum sp. Group II '5-way CG']
Length = 412
Score = 131 bits (329), Expect = 9e-29, Method: Composition-based stats.
Identities = 85/270 (31%), Positives = 139/270 (51%), Gaps = 8/270 (2%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
RFE VA RYL SNR++ +S+ + IS GV +GV AL+ ++VM GF+ + ++LG+N
Sbjct: 5 RFEWKVAIRYLRSNRRSRTLSLQTIISVSGVTVGVAALMATLAVMTGFQHKLRSKILGVN 64
Query: 66 GHVV-IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H+V + P+ + I + IP V+ V PF+ GQA +S SG ++RGIS S
Sbjct: 65 SHIVLTDGRGAPMDHPEDIEKEVRKIPGVLHVAPFILGQAMLSEG-KTVSGAVLRGISPS 123
Query: 125 DFSYLQNSFSRFYGNVSND-----FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + +D G+++G+DLA L + IGD ++++SP G ++
Sbjct: 124 SENKVTRFERYMVRGRLSDLDRPANAHRPGIVLGEDLADRLNVDIGDTVDVISPNGTMSA 183
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIE 238
GM + + + V+G+FR +YDN + +SL E+ + L +V+G+E+ V
Sbjct: 184 FGMVPKIRHFAVVGIFRSGLYEYDNTLALLSLPESARFLGLPQGSVTGLEIQVSHIMQAS 243
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ I LG W Q + FS
Sbjct: 244 RISREIATRLGYPYWPRSWLQMNRNLFSAL 273
>gi|27365415|ref|NP_760943.1| outer membrane-specific lipoprotein transporter subunit LolE
[Vibrio vulnificus CMCP6]
gi|320155800|ref|YP_004188179.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
vulnificus MO6-24/O]
gi|27361562|gb|AAO10470.1| lipoprotein releasing system, transmembrane protein LolE [Vibrio
vulnificus CMCP6]
gi|319931112|gb|ADV85976.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
vulnificus MO6-24/O]
Length = 414
Score = 131 bits (329), Expect = 9e-29, Method: Composition-based stats.
Identities = 52/267 (19%), Positives = 103/267 (38%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS +++ R+ + ++N +S S S IG+ +GV +I+ +S MNGF ++ RVL
Sbjct: 1 MFSSLALLIGRRFSQAKQRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQSRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H ++ P+ ++Q + + P V+ P+V V + V VRG+
Sbjct: 61 SVIPHAELEGVRAPVENWQSVMTQAVANPKVVAAAPYVKFTGLVERG-NKLKAVEVRGVE 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + F G+ +I N L +
Sbjct: 120 PDFEQAVSTMSQFIDQQAWSQFLPGQNQVIVGRGVANELGVDVGDYVTLLIPQTGESTKV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ +V + + +AQ Y +L V+GI + D +
Sbjct: 180 QAPKRVRVKVTGMLTLNGQIDHNLVLLPMADAQQYNHLGEGVTGIALKTNDVLNAQAIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ R + V + WQQ++ + +
Sbjct: 240 EVGRQIDVYVYLRSWQQQFGFLYRDIQ 266
>gi|37680545|ref|NP_935154.1| outer membrane-specific lipoprotein transporter subunit LolE
[Vibrio vulnificus YJ016]
gi|37199293|dbj|BAC95125.1| putative ABC transporter, integral membrane protein [Vibrio
vulnificus YJ016]
Length = 414
Score = 131 bits (329), Expect = 9e-29, Method: Composition-based stats.
Identities = 52/267 (19%), Positives = 103/267 (38%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS +++ R+ + ++N +S S S IG+ +GV +I+ +S MNGF ++ RVL
Sbjct: 1 MFSSLALLIGRRFSQAKQRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQSRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H ++ P+ ++Q + + P V+ P+V V + V VRG+
Sbjct: 61 SVIPHAELEGVRAPVENWQSVMTQAVANPKVVAAAPYVKFTGLVERG-NKLKAVEVRGVE 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + F G+ +I N L +
Sbjct: 120 PDFEQAVSTMSQFIDQQAWSQFLPGQNQVIVGRGVANELGVDVGDYVTLLIPQTGESTKV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ +V + + +AQ Y +L V+GI + D +
Sbjct: 180 QAPKRVRVKVTGMLTLNGQIDHNLVLLPMADAQQYNHLGEGVTGIALKTNDVLNAQAIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ R + V + WQQ++ + +
Sbjct: 240 EVGRQIDVYVYLRSWQQQFGFLYRDIQ 266
>gi|297183300|gb|ADI19437.1| ABC-type transport system, involved in lipoprotein release,
permease component [uncultured bacterium HF0500_16O16]
Length = 417
Score = 131 bits (329), Expect = 9e-29, Method: Composition-based stats.
Identities = 61/276 (22%), Positives = 113/276 (40%), Gaps = 11/276 (3%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
FE+ VA RYL S +++ F+S+ + I+ GV++GV ALI+++SV NGF ++ R++G+
Sbjct: 1 MSFELFVARRYLQSKQRSGFLSVITVIALGGVILGVAALIIMLSVTNGFSGEVRGRLIGM 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ HV IQ+ Y ++ V P G+ + GV V GI +
Sbjct: 61 DAHVSIQRYYDKPIEDPSALIDSLDRYGVAAAAPVAKGKVILITDDEEMDGVFVWGIDTA 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGV----------IIGKDLARNLGISIGDKINILSPY 174
F + + + +F G + + LG I
Sbjct: 121 SFGRVSDLPEHLRYDSHKEFHLESGEGERPGIVLGAYLANRMRVGLGDVIYLMTFGNQSL 180
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN-AVSGIEVFVKD 233
D+ G+ + V +F +D+ V++ +++A+ +E + I + + D
Sbjct: 181 DDMMMGGLSPNIDGFVVRDIFESGMYHFDDSFVFIGIEQARKLLRIEGEGATAIHIRIDD 240
Query: 234 PDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + LG DW Q++ F E
Sbjct: 241 LEQATALRQQLSTDLGYPYYTTDWTQQFPELFEWME 276
>gi|58038567|ref|YP_190531.1| lipoprotein releasing system transmembrane protein [Gluconobacter
oxydans 621H]
gi|58000981|gb|AAW59875.1| Lipoprotein releasing system transmembrane protein [Gluconobacter
oxydans 621H]
Length = 416
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 92/268 (34%), Positives = 134/268 (50%), Gaps = 3/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F RFE +VA RYL + R F SI + S IG+ +GV LI+VMSVMNGF+ D++ R+L
Sbjct: 1 MFGRFERMVAGRYLRARRGERFASIIAIFSLIGIALGVATLIIVMSVMNGFKADLMGRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G++G + + P+ Y+ + +P V V+P G V SG ++G+S
Sbjct: 61 GLHGDLTVYGYGRPIEAYENDVAAIRQVPGVKSVIPMAQGTVLVEAGRF-SSGAEMQGVS 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S NDF V IG +A G++IG I +LSP G TP G
Sbjct: 120 QQSLRDWTALSSGIIAGSLNDFTGDNAVAIGTTMADRAGLTIGSPITLLSPDGQATPFGT 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
R K+Y V +F + DY++ +V M L AQ + L +AVS I+V DP ++ T
Sbjct: 180 MPRVKTYHVAVIFDANWNDYNSSIVLMPLPAAQKFLMLGPSAVSLIQVSTADPSNVQPTR 239
Query: 242 ENIVRILGNG-VVVIDWQQRYQIFFSCY 268
+ I L + + V+DW Q F
Sbjct: 240 KAIAARLEDPRLRVLDWTQSANGFLDAV 267
>gi|117920728|ref|YP_869920.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Shewanella sp. ANA-3]
gi|117613060|gb|ABK48514.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella sp. ANA-3]
Length = 416
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 53/268 (19%), Positives = 104/268 (38%), Gaps = 1/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + WR+ + + N+FIS SF S G+ +GV LIVV+S MNGF ++ +R+L
Sbjct: 1 MKGPLALSIGWRFYRARQSNSFISFISFASTAGIALGVAVLIVVLSAMNGFERELEQRLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ + P+ D++ + I + PF+ Q V +V
Sbjct: 61 GVISQADVVGVNEPIADWRAVEQTAMQIEGITAAAPFIRMQGLVQKPGGFQGLAVVGIDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + +++G+ L + LG+ +GD + + D G
Sbjct: 121 EQEAKVSTLAQFMSKETWQGLSEDDNHIVLGESLLKKLGLEVGDTLALYVQDLDPEHAGS 180
Query: 183 GIRSKSYTVLGM-FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+KS+ + + + Y+ ++ A NL V+G+ + V
Sbjct: 181 LRAAKSHRFVVSGVYRLGGELELTTAYIPMRYAANILNLHQGVTGVRISVAQVFDAPAKI 240
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L V + DW + + +
Sbjct: 241 RELGYALNQSVYISDWTRTQGHLYQDIQ 268
>gi|114047311|ref|YP_737861.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Shewanella sp. MR-7]
gi|113888753|gb|ABI42804.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella sp. MR-7]
Length = 410
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 69/271 (25%), Positives = 120/271 (44%), Gaps = 5/271 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ RF + V +RY + + NAF S + + G+ +GV ALIVV SVMNG + +R+L
Sbjct: 1 MDLRFPLYVGYRYWRARKANAFASFITLFAVSGIFLGVAALIVVSSVMNGLEGQLKQRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G + PL D+ A++L +P V V P VS QA V ++ + +
Sbjct: 61 GAVP-QLTVVTETPLSDWTIPADKLKALPGVQGVTPSVSTQAMVQSAANIRAVQVFGVFP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G + VI+G +LAR L +S GD + +LS G V
Sbjct: 120 ELAEKLSMVAQHTYSGAFNELTSGQYKVILGSELARQLKVSPGDTVRLLSGDGVVYSPLG 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ ++ D G+ Y+ Q+A+ + ++ + +++ DP
Sbjct: 180 PVPSQRKFLVSAVFEMGSQVDAGVAYIHYQDAKRLMRQPSDEINQLRLYLSDPFMAPALA 239
Query: 242 ENIVRIL---GNGVVVIDWQQRYQIFFSCYE 269
+++ ++L G DW+ Y FS +
Sbjct: 240 KDVKQVLTQQGIEATTSDWRDTYGHLFSAVK 270
>gi|110679328|ref|YP_682335.1| lipoprotein releasing system transmembrane protein, putative
[Roseobacter denitrificans OCh 114]
gi|109455444|gb|ABG31649.1| lipoprotein releasing system transmembrane protein, putative
[Roseobacter denitrificans OCh 114]
Length = 428
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 80/275 (29%), Positives = 127/275 (46%), Gaps = 11/275 (4%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE ++AWRYL + R +S+ ++IS IG+ + V ALI +SV +GFR + + +LG
Sbjct: 8 FAGFEWMIAWRYLRARRSEGGVSVMTWISLIGITLAVFALIATLSVRSGFRAEFVDTILG 67
Query: 64 INGHVVIQ---------QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
N HV + Q + D+ IA L +P V +V P V GQ +
Sbjct: 68 ANAHVTVYALASVTENGQMDRTIPDFDAIAAELAVVPGVTRVAPLVRGQVMAAHRGRNAG 127
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ + S + + G+G+ +G +AR LG+ IGD+I ++SP
Sbjct: 128 VEVFGVAPENLRSLPRIADPATSRGDI--ARFGEGIALGSGVARELGVGIGDRIRLISPD 185
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G T G R +Y V +F D D Y+ +EAQ +FN + IEV V++P
Sbjct: 186 GVKTAFGTSPRVNAYEVTYIFTAGRYDIDRTRAYLPFKEAQSFFNRQGVADEIEVMVQEP 245
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I+ +++ G + WQ F E
Sbjct: 246 ERIDLMRMELLKAAGERGQLWTWQDASGGFLRALE 280
>gi|114047313|ref|YP_737863.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Shewanella sp. MR-7]
gi|113888755|gb|ABI42806.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella sp. MR-7]
Length = 416
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 54/268 (20%), Positives = 104/268 (38%), Gaps = 1/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + WR+ + + N+FIS SF S G+ +GV LIVV+S MNGF ++ +R+L
Sbjct: 1 MKGPLALSIGWRFYRARQSNSFISFISFASTAGIALGVAVLIVVLSAMNGFERELEQRLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ + P+ D++ + I + PF+ Q V +V
Sbjct: 61 GVISQADVVGVNEPIADWRAVEQTAMQIEGITAAAPFIRMQGLVQKPGGFQGLAVVGIDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S + +++G+ L + LG+ +GD + + D G
Sbjct: 121 EQEAKVSTLSQFMSKETWQGLSEDDNHIVLGESLLKKLGLEVGDTLALYVQDLDPEHAGS 180
Query: 183 GIRSKSYTVLGM-FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+KS+ + + + Y+ ++ A NL V+G+ + V
Sbjct: 181 LRAAKSHRFVVSGVYRLGGELELTTAYIPMRYAANILNLHQGVTGVRISVAQVFDAPAKI 240
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L V + DW + + +
Sbjct: 241 RELGYALNQSVYISDWTRTQGHLYQDIQ 268
>gi|238020904|ref|ZP_04601330.1| hypothetical protein GCWU000324_00799 [Kingella oralis ATCC 51147]
gi|237867884|gb|EEP68890.1| hypothetical protein GCWU000324_00799 [Kingella oralis ATCC 51147]
Length = 420
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 66/272 (24%), Positives = 136/272 (50%), Gaps = 6/272 (2%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ E + RYL + +++ F+S S IS +G+ +GV+ALI V+SV+NGF++++ ++L
Sbjct: 1 MASLETWIGLRYLRAKKRSGFMSFISAISIVGIALGVIALITVLSVVNGFQKEIRGQLLN 60
Query: 64 INGHVVIQQKYY-----PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
I H ++ ++ + +L +VI P +SGQA ++ L
Sbjct: 61 IAPHAMVSYLPSETESANAPTWKQLQTQLANKTEVIATAPVLSGQALLANAGEVRGVQLD 120
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
+ + + + + G++++ +I+G LA+ L ++IG+K+ +++P G+VT
Sbjct: 121 GILPEQERKVVDYANNLEAGSLNDLKPDEFNIILGSALAKTLEVNIGNKVTVITPEGNVT 180
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
P G+ R K + V+G+ + D DN + L++A+ + + + + + + DP
Sbjct: 181 PAGVAPRLKQFNVVGIVKTGVEDADNVKALIHLEDAKKLYRQDESSVLLRLRLADPQNAP 240
Query: 239 KTHENIV-RILGNGVVVIDWQQRYQIFFSCYE 269
+ ++ N + V DW + +FS E
Sbjct: 241 AVMQRLIPESQRNTIWVQDWTDNNRSYFSAVE 272
>gi|187478024|ref|YP_786048.1| lipoprotein releasing system, transmembrane protein [Bordetella
avium 197N]
gi|115422610|emb|CAJ49135.1| lipoprotein releasing system, transmembrane protein [Bordetella
avium 197N]
Length = 426
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 70/276 (25%), Positives = 129/276 (46%), Gaps = 12/276 (4%)
Query: 6 RFEVIVAWRY-------LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMI 58
+E+ + RY R++ FIS + S G+ +GV ALIVV+SVMNGF++++
Sbjct: 5 PYELWIGARYAGLAGSGRRGGRRDRFISFIAASSMAGIALGVAALIVVLSVMNGFQKEVR 64
Query: 59 KRVLGINGHVVIQQ----KYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
R+L + H+ + L +Q + P+VI PFV+ A + S +
Sbjct: 65 DRMLSVLPHIELYIPGALPERVLDQWQQFGDAARKNPEVIGEAPFVAAGAMLVRGQSLHA 124
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ + G +S+ G GV++G +LA N+G+ GD + +L+P
Sbjct: 125 VQVRGIDPALEGKVSDLPKQMVTGKLSDLKPGGFGVVLGNELADNMGVKTGDTLLMLAPQ 184
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G ++P G R + +TV+G F +YD+ + ++ ++A F G+ + V D
Sbjct: 185 GSISPAGFAPRMRQFTVVGTFSSGHYEYDSSLAFIDDEDAAKVFRDSGTA-GVRLRVADM 243
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ + R+L V+ DW + + +F+ ++
Sbjct: 244 QRAPEVAAELTRVLPPYVMASDWSRNNRTWFAAVQT 279
>gi|254249950|ref|ZP_04943270.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia cenocepacia PC184]
gi|124876451|gb|EAY66441.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia cenocepacia PC184]
Length = 417
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 68/268 (25%), Positives = 120/268 (44%), Gaps = 4/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ FE + RY R+ + F+S + + G+ +GV ALIVV+SVMNGFR ++
Sbjct: 1 MKLPFESQIGLRYAHGGRRSAGDGFVSFIAGAAMAGIALGVAALIVVLSVMNGFRTEVRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + HV I + D++ A+ V V P+V QA ++ + L
Sbjct: 61 RMLSVLAHVEIFSPSGAMPDWRLTAHESLQNAAVRAVAPYVDAQALLTNAGNVTGVALRG 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + + G + G+++G LA L + IGD+I +P
Sbjct: 121 IDPVLEPRVSEIARKLKTGRLDALVPGEMGIVLGAALADALHVKIGDRITFFAPGNTARL 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
R + + V+G F YD+ + Y+ +++AQ N+ NA +GI + V D +
Sbjct: 181 GDALPRFRQFNVVGTFESGHYQYDSALAYIHIRDAQQLSNV-NAPTGIRLRVDDLQRAPE 239
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSC 267
+ R L + + DW ++ + +F
Sbjct: 240 IALALSRSLSGNLYIRDWTRQNRTWFEA 267
>gi|317406528|gb|EFV86728.1| lipoprotein releasing system [Achromobacter xylosoxidans C54]
Length = 426
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 66/276 (23%), Positives = 129/276 (46%), Gaps = 12/276 (4%)
Query: 6 RFEVIVAWRY-------LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMI 58
+E+ + RY R++ FIS + S G+ +GV ALIVV+SVMNGF++++
Sbjct: 5 PYELWIGARYAGLARIRQRRGRRDRFISFIAASSMAGIALGVAALIVVLSVMNGFQKEVR 64
Query: 59 KRVLGINGHVVIQQ----KYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
R+L + H+ + L +Q A+ P+V PFV+ Q V +
Sbjct: 65 DRMLSVLPHIELYIPGAAPERVLEQWQQFADAAKRNPEVKAGAPFVAAQGMVVRGQALRG 124
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ ++ + G +++ G GV++G +LA +G+ +GD + +L+P
Sbjct: 125 VQVRGIDPATEGNVSDLPRQMVAGKLADLKPGGFGVVLGNELADGMGVKVGDTLLMLAPQ 184
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G ++P G R + +TV+G+F +YD+ + ++ ++A F G+ + + D
Sbjct: 185 GSISPAGFAPRMRQFTVVGVFSSGHYEYDSSLAFVDNEDAAKVFRDSGTA-GVRLRIADM 243
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ +L V+ DW + + +F+ ++
Sbjct: 244 QKAPDVAAELRNVLPPYVMASDWSRNNRTWFAAVQT 279
>gi|15641884|ref|NP_231516.1| outer membrane-specific lipoprotein transporter subunit LolE
[Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121587298|ref|ZP_01677070.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121727121|ref|ZP_01680295.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|147674975|ref|YP_001217415.1| outer membrane-specific lipoprotein transporter subunit LolE
[Vibrio cholerae O395]
gi|153818866|ref|ZP_01971533.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|153823447|ref|ZP_01976114.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|227082012|ref|YP_002810563.1| Lipoprotein-releasing system transmembrane protein lolE [Vibrio
cholerae M66-2]
gi|229508020|ref|ZP_04397525.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
cholerae BX 330286]
gi|229511741|ref|ZP_04401220.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
cholerae B33]
gi|229518879|ref|ZP_04408322.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
cholerae RC9]
gi|229607567|ref|YP_002878215.1| outer membrane-specific lipoprotein transporter subunit LolE
[Vibrio cholerae MJ-1236]
gi|254848969|ref|ZP_05238319.1| outer membrane-specific lipoprotein transporter subunit LolE
[Vibrio cholerae MO10]
gi|255745358|ref|ZP_05419307.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
cholera CIRS 101]
gi|262153538|ref|ZP_06028667.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
cholerae INDRE 91/1]
gi|262167438|ref|ZP_06035145.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
cholerae RC27]
gi|298498079|ref|ZP_07007886.1| lipoprotein releasing system, transmembrane protein LolE [Vibrio
cholerae MAK 757]
gi|9656413|gb|AAF95030.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121548458|gb|EAX58516.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121630499|gb|EAX62891.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|126510594|gb|EAZ73188.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|126519036|gb|EAZ76259.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|146316858|gb|ABQ21397.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|227009900|gb|ACP06112.1| Lipoprotein-releasing system transmembrane protein lolE [Vibrio
cholerae M66-2]
gi|227013780|gb|ACP09990.1| Lipoprotein-releasing system transmembrane protein lolE [Vibrio
cholerae O395]
gi|229343568|gb|EEO08543.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
cholerae RC9]
gi|229351706|gb|EEO16647.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
cholerae B33]
gi|229355525|gb|EEO20446.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
cholerae BX 330286]
gi|229370222|gb|ACQ60645.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
cholerae MJ-1236]
gi|254844674|gb|EET23088.1| outer membrane-specific lipoprotein transporter subunit LolE
[Vibrio cholerae MO10]
gi|255737188|gb|EET92584.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
cholera CIRS 101]
gi|262024135|gb|EEY42829.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
cholerae RC27]
gi|262030665|gb|EEY49300.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
cholerae INDRE 91/1]
gi|297542412|gb|EFH78462.1| lipoprotein releasing system, transmembrane protein LolE [Vibrio
cholerae MAK 757]
Length = 414
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 55/267 (20%), Positives = 113/267 (42%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS + + R+ + ++N +S S S IG+ +GV +I+ +S MNGF ++ RVL
Sbjct: 1 MFSSLALFIGGRFSRAKQRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + P+ + + + P ++ P+V A + + +
Sbjct: 61 SVIPHGEFEGVRGPVERWPDLMAQAARHPQIVAAAPYVKITALAESGTQLKAIEVRGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + S + + VI+G+ +A LG+ +GD I ++ P + +
Sbjct: 121 QREQAVSRLSQFITAQAWQDFRPGQQQVILGQGVAEKLGVQVGDFITLMIPSANSGDK-V 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + + L++AQ Y +L + V+GI V V D +
Sbjct: 180 QAPKRVRVKVSGLLALNGQIDHSLALLPLEDAQAYAHLGSGVTGISVKVADVLQATQIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ L V + WQQ+Y + +
Sbjct: 240 DVGNQLNEYVYLHSWQQKYGFLYRDIQ 266
>gi|254284245|ref|ZP_04959213.1| transport protein of outer membrane lipoproteins (ABC superfamily,
membrane) [gamma proteobacterium NOR51-B]
gi|219680448|gb|EED36797.1| transport protein of outer membrane lipoproteins (ABC superfamily,
membrane) [gamma proteobacterium NOR51-B]
Length = 411
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 63/259 (24%), Positives = 122/259 (47%), Gaps = 2/259 (0%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A RY S R+ F + + +S G+++GV +LI VMS+MNGF +++ R+L + H +
Sbjct: 7 IALRYGLSRRQQRFTRVVALVSTFGMVLGVASLITVMSIMNGFSDELHNRILAVVPHGKL 66
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
L D+ + ++ P + V P++ + ++ ++ Q
Sbjct: 67 TASSGVLTDWPELKRKIMRQPGIKAVAPYIDETVLMQAWGQSRGSIMKGIDLEAERDINQ 126
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
G+++ +R V +G+ LAR LG+S+GD + + P VTP+G+ R K
Sbjct: 127 LHTHIVSGSLNAIEERRFTVALGQSLARLLGVSVGDSVIVTVPSLTVTPLGLFPRIKRLE 186
Query: 191 VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN 250
V+ F + + D Y+SL+ AQ +E V G+++ + A + + + L +
Sbjct: 187 VVAEFEVG-AEPDASHSYVSLETAQRLLGVEG-VQGLQLRTDNLMAAPQIIDALGSQLPS 244
Query: 251 GVVVIDWQQRYQIFFSCYE 269
+ + DW+ F+ +
Sbjct: 245 TIALSDWRDTQGSLFTAVQ 263
>gi|113970070|ref|YP_733863.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Shewanella sp. MR-4]
gi|117920730|ref|YP_869922.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Shewanella sp. ANA-3]
gi|113884754|gb|ABI38806.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella sp. MR-4]
gi|117613062|gb|ABK48516.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella sp. ANA-3]
Length = 410
Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 69/271 (25%), Positives = 120/271 (44%), Gaps = 5/271 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ RF + V +RY + + NAF S + + G+ +GV ALIVV SVMNG + +R+L
Sbjct: 1 MDLRFPLYVGYRYWRARKANAFASFITLFAVSGIFLGVAALIVVSSVMNGLEGQLKQRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G + PL D+ A++L +P V V P VS QA V ++ + +
Sbjct: 61 GAVP-QLTVVTEAPLSDWTIPADKLKALPGVQGVTPSVSTQAMVQSAANIRAVQVFGVFP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G + VI+G +LAR L +S GD + +LS G V
Sbjct: 120 ELAEKLSMVAQHTYSGAFNELTSGQYKVILGSELARQLKVSPGDTVRLLSGDGVVYSPLG 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ ++ D G+ Y+ Q+A+ + ++ + +++ DP
Sbjct: 180 PVPSQRKFLVSAVFEMGSQVDAGVAYIHYQDAKRLMRQPSDEINQLRLYLSDPFMAPALA 239
Query: 242 ENIVRIL---GNGVVVIDWQQRYQIFFSCYE 269
+++ ++L G DW+ Y FS +
Sbjct: 240 KDVKQVLTQQGIEATTSDWRDTYGHLFSAVK 270
>gi|149192403|ref|ZP_01870603.1| hypothetical protein VSAK1_03917 [Vibrio shilonii AK1]
gi|148833768|gb|EDL50805.1| hypothetical protein VSAK1_03917 [Vibrio shilonii AK1]
Length = 406
Score = 131 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 60/268 (22%), Positives = 107/268 (39%), Gaps = 7/268 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RYL + F S++S G+ IGV++L+ V+SVMNGF + R+L
Sbjct: 5 MFHPLPVFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVLSLVTVLSVMNGFEAQLKGRIL 64
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ VI + L+ +P V +A V + +++
Sbjct: 65 GVLPQAVISHDSGRVDLNDKPDALLNSFATSQPAVPIVRSEAVVQSHQGLSAAMMIGIEP 124
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+D + G++ N V++G LAR L + +GDK+ ++
Sbjct: 125 ETDD---PIRYRLVSGSLDNLQAGKYQVLLGHTLARELDVRVGDKVRLMVTSASQYTPLG 181
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + D D +V L++A + + SG +F DP +
Sbjct: 182 RIPSQRMFTVAGLYSTGSDVDGQLVVTHLKDAAKLMRYKADEASGWRLFFNDPFVVSNLS 241
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
E + L +G + DW+ + F +
Sbjct: 242 E---QPLPDGWLWSDWRDQRGELFQAVK 266
>gi|124514752|gb|EAY56264.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Leptospirillum rubarum]
Length = 412
Score = 131 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 87/270 (32%), Positives = 139/270 (51%), Gaps = 8/270 (2%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
RFE VA RYL SNR++ +S+ + IS GV +GV AL+ ++VM GF+ + ++LG+N
Sbjct: 5 RFEWKVAIRYLRSNRRSRTLSLQTIISVSGVTVGVAALMATLAVMTGFQHKLRSKILGVN 64
Query: 66 GHVV-IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H+V + P+ + I + IP V+ V PF+ GQA +S SG ++RGIS S
Sbjct: 65 SHIVLTDGRGAPMDHPEEIEKEVRKIPGVLHVAPFILGQAMLSEG-KTVSGAVLRGISPS 123
Query: 125 DFSYLQNSFSRFYGNVSND-----FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
D + + +D G+++G+DLA L + IGD ++++SP G ++
Sbjct: 124 DENKVTRFERYMVRGRLSDLDRPANAHRPGIVLGEDLADRLNVDIGDTVDVISPNGTMSA 183
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIE 238
GM + + + V+G+FR +YDN + +SL E+ + L +VSG+E+ V
Sbjct: 184 FGMVPKIRHFAVVGIFRSGLYEYDNTLALLSLPESARFLGLPQGSVSGLEIQVSHIMQAS 243
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
I LG W Q + FS
Sbjct: 244 HISREIATRLGYPYWPRSWLQMNRNLFSAL 273
>gi|225023633|ref|ZP_03712825.1| hypothetical protein EIKCOROL_00493 [Eikenella corrodens ATCC
23834]
gi|224943515|gb|EEG24724.1| hypothetical protein EIKCOROL_00493 [Eikenella corrodens ATCC
23834]
Length = 416
Score = 131 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 69/268 (25%), Positives = 125/268 (46%), Gaps = 2/268 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
E + RY+ + ++N +S+ S IS +G+ GV ALIVV+SVMNGF++++ ++L
Sbjct: 1 MLSLETWIGLRYMRAKKRNGLMSVISIISILGIATGVTALIVVLSVMNGFQKEIRGQLLQ 60
Query: 64 INGHVVIQQ-KYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H+ + + P +Q +A P V+ V P+VSGQA ++ +
Sbjct: 61 VTPHMQMSYLQADPGDTWQGLAKIAQANPRVLGVAPYVSGQALLANSGEVQGVQVKGIDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + +I+GKD+A LG+ G+K+ ++SP G+VTP+GM
Sbjct: 121 AEEPKVSEYGEKLPNELYQQLKPGQFEMILGKDIADRLGVQPGEKVTLISPEGNVTPVGM 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV DN + + +++A+ + + I++ + P+
Sbjct: 181 VPRMKQFTVASTVSTGIFAVDNSLSIIHIEDAKTLYRAGDGDVSIQLRLSQPETAPDVTA 240
Query: 243 NIV-RILGNGVVVIDWQQRYQIFFSCYE 269
IV N + DW + + +F E
Sbjct: 241 TIVPAEQRNRIAAFDWTYQNRDYFQAVE 268
>gi|120598672|ref|YP_963246.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Shewanella sp. W3-18-1]
gi|120558765|gb|ABM24692.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella sp. W3-18-1]
Length = 416
Score = 131 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 58/268 (21%), Positives = 109/268 (40%), Gaps = 1/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + WR+ + + N+FIS SF S G+ +GV LIVV+S MNGF ++ +R+L
Sbjct: 1 MKGPLALSIGWRFYRARQSNSFISFISFASTAGIALGVAVLIVVLSAMNGFERELEQRLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ I P+VD+Q +A I + PF+ Q V +V
Sbjct: 61 GVIPQADIVGVNEPIVDWQSVAEGALQIEGIRGAAPFIRMQGLVQKPGGFQGLSVVGIAP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + + +++GK L + LG+ IGD + + D G
Sbjct: 121 EEETKVSTLAQFMNDESWQSLAQDENHIVLGKSLLKKLGLEIGDTLALYVQDMDPENAGS 180
Query: 183 GIRSKSYTVLGM-FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+KS+ + + + Y+ ++ A N++N V+G+ + V+
Sbjct: 181 LRAAKSHRFVVSGVYALGGELELTTAYIPMRYAAQILNMQNGVTGVRISVEQVFDAPAKV 240
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ V + DW + + +
Sbjct: 241 RELGYAQKQSVYISDWTRTQGHLYQDIQ 268
>gi|315180606|gb|ADT87520.1| outer membrane-specific lipoprotein transporter subunit LolE
[Vibrio furnissii NCTC 11218]
Length = 414
Score = 131 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 55/267 (20%), Positives = 115/267 (43%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + + R+ + ++N +S S S IG+ +GV +I+ +S MNGF ++ RVL
Sbjct: 1 MLASLSLFIGSRFSRAKQRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQNRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + P+ ++Q + + P+V+ P+V A + + +
Sbjct: 61 SVIPHGEFEGVRGPVQNWQAVVAQATQDPEVLAAAPYVKFTALAERGTQLKAIEVRGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + + S + VI+GK +A LG +GD + ++ P D +
Sbjct: 121 SMEQAVSRLSQFVTDEAWPRFVPGEQQVILGKGVADQLGAKVGDYVTLMIPTADGSSRVQ 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + D+ + + L++AQ Y L++AV+G+ + V D +
Sbjct: 181 APRRIRVQIT-GLLALNGQIDHSLALLPLEDAQQYARLDHAVTGVSIKVSDVLRANQIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ L V + WQQ++ + +
Sbjct: 240 SVGNTLNEYVYLRSWQQKFGFLYRDIQ 266
>gi|90417521|ref|ZP_01225443.1| hypothetical protein GB2207_03212 [marine gamma proteobacterium
HTCC2207]
gi|90330674|gb|EAS45958.1| hypothetical protein GB2207_03212 [marine gamma proteobacterium
HTCC2207]
Length = 426
Score = 131 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 62/277 (22%), Positives = 115/277 (41%), Gaps = 12/277 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + + RY+ S R+++F+S S S + IGVMALIVV+SVMNGF ++ R+L
Sbjct: 1 MLTNLPLFIGLRYMRSKRRDSFVSFISLFSLAAMAIGVMALIVVLSVMNGFDREIKMRLL 60
Query: 63 GINGHVVIQQKY-----YPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVL 117
+ HV + + D P + + + + +G++
Sbjct: 61 RVVPHVTLTSPQGLDIAQINQLEAELKAGSDNAPVQVLSVVPLLQSFVMGSSKGNQAGLV 120
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
++GI + + + + G V GV+IG +AR L + +GD++ + P V
Sbjct: 121 LQGIDPESRAGEKLAENMISGYVGQLQAGEFGVVIGSQVARKLDLFVGDRLQLTLPSVTV 180
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
TP G R K TV G+F++ D +V++ ++ Q L G+++ + D
Sbjct: 181 TPAGAFPRIKRVTVTGIFQVGAQV-DASVVFIHYRDGQKLLRLGKRFQGVQLELSDAFMA 239
Query: 238 EKT------HENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + + + W F
Sbjct: 240 DNWLGSQGDKNFLADRPKDDLQWRTWSDNMGTLFQAM 276
>gi|262171152|ref|ZP_06038830.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
mimicus MB-451]
gi|261892228|gb|EEY38214.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
mimicus MB-451]
Length = 414
Score = 131 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 55/267 (20%), Positives = 111/267 (41%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS + + R+ + ++N +S S S IG+ +GV +I+ +S MNGF ++ RVL
Sbjct: 1 MFSSLALFIGGRFSRAKQRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQSRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + P+ + + + P ++ P+V A + + +
Sbjct: 61 SVIPHGEFEGVRGPVQRWPDLMAQAASHPQILAAAPYVKMTALAENGTQLKAIEVRGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + S N + VI+G+ +A LG+ +GD I ++ P
Sbjct: 121 QREQAVSRLSQFITPQAWQNFIPGQQQVILGQGVADKLGVQVGDFITLMIPSATSGEKVQ 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + + L++AQ Y NL + V+G+ V V + +
Sbjct: 181 APKRVRV-KVSGLLTLNGQIDHSLALLPLEDAQGYANLGSGVTGVSVKVSNVLQATQIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ L V + WQQ+Y + +
Sbjct: 240 DVGNQLNEYVYLHSWQQKYGFLYRDIQ 266
>gi|312172127|emb|CBX80384.1| Lipoprotein releasing system, transmembrane protein [Erwinia
amylovora ATCC BAA-2158]
Length = 399
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 53/268 (19%), Positives = 100/268 (37%), Gaps = 8/268 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNG + K L
Sbjct: 1 MYQPVALFIGLRYMRGRGSDRFGRFVSWLSAIGITLGVMALVTVLSVMNGLEHQLEKNTL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ + Q A+ L V + S GS + +
Sbjct: 61 GLMPQALVTSDSGSINPRQTPADSLHL----SGVSRITPLTTGEVVMQSAGSVGVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ VI+G+ LA LG+ G+++ ++ P
Sbjct: 117 VDPDEADPLTPFLINVKQQQLRSGQYNVIVGEQLAGQLGLKTGEQVRMMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + D D V ++ Q+A ++G +++ P ++ T
Sbjct: 177 RIPSQRLFTVIGTFSANSDVDGYQVLVNQQDASRLMRYPAGNITGWRLWLDKPLQVDSTS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L +V DW++R F +
Sbjct: 237 ---QQALPESLVWKDWRERKGELFQAVK 261
>gi|262394761|ref|YP_003286615.1| lipoprotein releasing system transmembrane protein LolE [Vibrio sp.
Ex25]
gi|262338355|gb|ACY52150.1| lipoprotein releasing system transmembrane protein LolE [Vibrio sp.
Ex25]
Length = 414
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 55/267 (20%), Positives = 109/267 (40%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS +++ R+ + ++N +S S S IG+ +GV +I+ +S MNGF ++ RVL
Sbjct: 1 MFSSLALMIGGRFSRAKKRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQSRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H ++ PL +Y N+ V+ P+V S + +
Sbjct: 61 SVIPHGELEGVNGPLHNYTKTMNQALNHEHVVAAAPYVRFTGLAEKGSKLKAIEVRGVEP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + S N + + VI+G+ +A L +++GD I ++ P +
Sbjct: 121 TFEQAVSSLSNFIDQEAWQNFYAGQQQVILGRGVANELNVAVGDYITLMIPQAGG-ANKV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + F D+ + + L +AQ Y L V+GI + D
Sbjct: 180 QAPKRVRVKVSGFLTLNGQIDHSLALVPLADAQQYARLGEGVTGISLKTDDVLNAPSIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ ++ V + WQQ++ + +
Sbjct: 240 EVGSMVDVYVYLKSWQQKFGFLYRDIQ 266
>gi|84386594|ref|ZP_00989620.1| putative ABC transporter, integral membrane protein [Vibrio
splendidus 12B01]
gi|84378400|gb|EAP95257.1| putative ABC transporter, integral membrane protein [Vibrio
splendidus 12B01]
Length = 414
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 52/267 (19%), Positives = 107/267 (40%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS +++ R+ + +++ +S S S IG+ +GV +I+ +S MNGF ++ RVL
Sbjct: 1 MFSSLSLLIGGRFSRAKQRDKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELESRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + P+ ++ + + V+ P+V A + +
Sbjct: 61 SVIPHGEFEGVNEPVTRWEHVIEQSVKNDKVVAAAPYVKITALAEKGKELKAIEVRGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S S + +I+G +A LG +GD + ++ P + +
Sbjct: 121 QLEQQVSSLSKFIDKQAWSEFKAGQQQIILGSGVANVLGAKVGDYLTLMIPTVNGSVKVQ 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ V+ D+ + + + +AQ Y NL AV+G+ + V D
Sbjct: 181 APKRVRVKVV-GLLTLNGQIDHSLALIPIGDAQAYANLGEAVTGVSLKVTDVLNANSIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L V + WQQ++ + +
Sbjct: 240 EVGNQLDVYVYLRSWQQKFGFLYRDIQ 266
>gi|292488003|ref|YP_003530880.1| lipoprotein releasing system, transmembrane protein [Erwinia
amylovora CFBP1430]
gi|292899221|ref|YP_003538590.1| lipoprotein-releasing system transmembrane protein [Erwinia
amylovora ATCC 49946]
gi|291199069|emb|CBJ46180.1| lipoprotein-releasing system transmembrane protein [Erwinia
amylovora ATCC 49946]
gi|291553427|emb|CBA20472.1| Lipoprotein releasing system, transmembrane protein [Erwinia
amylovora CFBP1430]
Length = 399
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 53/268 (19%), Positives = 100/268 (37%), Gaps = 8/268 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNG + K L
Sbjct: 1 MYQPVALFIGLRYMRGRGSDRFGRFVSWLSAIGITLGVMALVTVLSVMNGLEHQLEKNTL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ + Q A+ L V + S GS + +
Sbjct: 61 GLMPQALVTSDSGSINPRQTPADSLHL----SGVSRITPLTTGEVVMQSAGSVGVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ VI+G+ LA LG+ G+++ ++ P
Sbjct: 117 IDPDEADPLTPFLINVKQQQLRSGQYNVIVGEQLAGQLGLKTGEQVRMMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + D D V ++ Q+A ++G +++ P ++ T
Sbjct: 177 RIPSQRLFTVIGTFSANSDVDGYQVLVNQQDASRLMRYPAGNITGWRLWLDKPLQVDSTS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L +V DW++R F +
Sbjct: 237 ---QQALPESLVWKDWRERKGELFQAVK 261
>gi|86146941|ref|ZP_01065259.1| hypothetical protein MED222_19604 [Vibrio sp. MED222]
gi|85835191|gb|EAQ53331.1| hypothetical protein MED222_19604 [Vibrio sp. MED222]
Length = 414
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 110/267 (41%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS +++ R+ + +++ +S S S IG+ +GV +I+ +S MNGF ++ RVL
Sbjct: 1 MFSSLSLLIGGRFSRAKQRDKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQSRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + P+ ++ + + DV+ P+V A + +
Sbjct: 61 SVIPHGEFEGVNEPVTRWEHVIEQATQHEDVVAAAPYVKITALAEKGKELKAIEVRGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S S+ + +I+G +A LG +GD + ++ P + +
Sbjct: 121 QLEQQVSSLSSFIDKKAWSDFKAGQQQIILGSGVANVLGAKVGDYLTLMIPTVNGSLKVQ 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ V+ D+ + + + +AQ+Y NL AV+G+ + V D
Sbjct: 181 APKRVRVKVV-GLLTLNGQIDHSLALIPIGDAQVYANLGEAVTGVSLKVTDVLNANSIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L V + WQQ++ + +
Sbjct: 240 EVGNQLDVYVYLRSWQQKFGFLYRDIQ 266
>gi|59713645|ref|YP_206420.1| outer membrane-specific lipoprotein transporter subunit [Vibrio
fischeri ES114]
gi|59481893|gb|AAW87532.1| outer membrane-specific lipoprotein transporter subunit [Vibrio
fischeri ES114]
Length = 402
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 64/268 (23%), Positives = 111/268 (41%), Gaps = 7/268 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RYL + F S++S G+ IGV++L+ V+SVMNGF + R+L
Sbjct: 1 MFHPVSVFIGLRYLRGRSGDRFSRFISYMSTAGITIGVLSLVTVLSVMNGFEGQLKDRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ VI + + +P V +V P V G+A + +G+LV
Sbjct: 61 GVLPQAVISSTDNQITPLDDEREYVASLPHVTQVTPVVRGEAIIQSARGLSAGMLVGIEP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM-G 181
N ++ GNV G+ +G LAR L + GD + I+ G
Sbjct: 121 NEYD---PIAYELISGNVRQLAAGEYGIFLGSKLARELSVRYGDTVRIMVTNASQYTPLG 177
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+++ V+G+F MV A+L + ++G +F +DP + +
Sbjct: 178 RIPSQRNFKVVGVFNTGSDVDGQLMVANIQDTARLMKLKKGNITGWRLFFEDPFQVTELA 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L + + DW+ + F +
Sbjct: 238 K---MPLEHEMTWSDWRDQRGELFQAVK 262
>gi|259908751|ref|YP_002649107.1| outer membrane-specific lipoprotein transporter subunit LolC
[Erwinia pyrifoliae Ep1/96]
gi|224964373|emb|CAX55882.1| ABC-type transport system, involved in lipoprotein release,
permease component [Erwinia pyrifoliae Ep1/96]
gi|283478724|emb|CAY74640.1| Lipoprotein releasing system, transmembrane protein [Erwinia
pyrifoliae DSM 12163]
Length = 399
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 52/268 (19%), Positives = 100/268 (37%), Gaps = 8/268 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNG + K L
Sbjct: 1 MYQPVALFIGLRYMRGRGSDRFGRFVSWLSAIGITLGVMALVTVLSVMNGLEHQLEKNTL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ + Q A+ L V + S GS + +
Sbjct: 61 GLMPQALVTSDSGFINPQQMPASSLHL----SGVSRITPLTTGEVVMQSAGSVGVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ VI+G+ LA LG+ G+++ ++ P
Sbjct: 117 INPDEADPLKPFLINVKQQQLRSGQYNVIVGEQLAGQLGLKTGEQVRLMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + D D + ++ Q+A ++G +++ P ++ T
Sbjct: 177 RIPSQRLFTVIGTFSANSDVDGYQILVNQQDASRLMRYPAGNITGWRLWLDKPLQVDSTS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L +V DW++R F +
Sbjct: 237 ---QQALPESLVWKDWRERKGELFQAVK 261
>gi|310767352|gb|ADP12302.1| outer membrane-specific lipoprotein transporter subunit LolC
[Erwinia sp. Ejp617]
Length = 399
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 52/268 (19%), Positives = 101/268 (37%), Gaps = 8/268 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNG + K L
Sbjct: 1 MYQPVALFIGLRYMRGRGSDRFGRFVSWLSAIGITLGVMALVTVLSVMNGLEHQLEKNTL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ + Q A+ L V + S GS + +
Sbjct: 61 GLMPQALVTSDSGFINPQQTPASSLHL----SGVSRITPLTTGEVVMQSAGSVGVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + VI+G+ LA LG+ G+++ ++ P
Sbjct: 117 INPDEADPLTPFLINVKQQQLRSGQYNVIVGEQLAGQLGLKTGEQVRLMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + D D + ++ Q+A ++G +++ P ++ T
Sbjct: 177 RIPSQRLFTVIGTFSANSDVDGYQILVNQQDASRLMRYPAGNITGWRLWLDKPLQVDSTS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L +V DW++R F +
Sbjct: 237 ---QQALPESLVWKDWRERKGELFQAVK 261
>gi|258626799|ref|ZP_05721606.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|258580846|gb|EEW05788.1| conserved hypothetical protein [Vibrio mimicus VM603]
Length = 414
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 55/267 (20%), Positives = 111/267 (41%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS + + R+ + ++N +S S S IG+ +GV +I+ +S MNGF ++ RVL
Sbjct: 1 MFSSLALFIGGRFSRAKQRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQSRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + P+ + + + P ++ P+V A + + +
Sbjct: 61 SVIPHGEFEGVRGPVQRWPDLMAQAASHPQILAAAPYVKMTALAENGTQLKAIEVRGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + S N + VI+G+ +A LG+ +GD I ++ P
Sbjct: 121 QREQAVSRLSQFITPQAWQNFIPGQQQVILGQGVADKLGVQVGDFITLMIPSATSGEKVQ 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + + L++AQ Y NL + V+G+ V V + +
Sbjct: 181 APKRVRV-KVSGLLTLNGQIDHSLALLPLEDAQGYANLGSGVTGVSVKVSNVLQATQIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ L V + WQQ+Y + +
Sbjct: 240 DVGNQLNEYVYLHSWQQKYGFLYRDIQ 266
>gi|188534111|ref|YP_001907908.1| outer membrane-specific lipoprotein transporter subunit LolC
[Erwinia tasmaniensis Et1/99]
gi|188029153|emb|CAO97025.1| ABC-type transport system, involved in lipoprotein release,
permease component [Erwinia tasmaniensis Et1/99]
Length = 399
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 57/268 (21%), Positives = 103/268 (38%), Gaps = 8/268 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMALI V+SVMNG + K L
Sbjct: 1 MYQPVALFIGLRYMRGRGSDRFGRFVSWLSAIGITLGVMALITVLSVMNGLEHQLEKNTL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ +I + + Q A+ L V L S GS + +
Sbjct: 61 GLMPQALITSESGSIDPRQTPASSLHL----SGVSRITPLSTGEVVLQSAGSVGVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + VI+G+ LA LG+ IG+++ ++ P
Sbjct: 117 INPDEADPLTPFLVNVKQQQLQSGQYNVIVGEQLAGQLGLKIGEQVRLMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + D D V ++ Q+A ++G +++ P ++ T
Sbjct: 177 RIPSQRLFNVIGTFSANSDVDGYQVLVNQQDASRLMRYPSGHITGWRLWLDKPLQVDSTS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L +V DW++R F +
Sbjct: 237 ---QQTLPTSLVWKDWRERKGELFQAVK 261
>gi|241761005|ref|ZP_04759094.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|241374624|gb|EER64085.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Zymomonas mobilis subsp. mobilis ATCC 10988]
Length = 416
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 84/266 (31%), Positives = 126/266 (47%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
I S +E I+A RYL + AFI + + IS + V +GV ALI+VMSVMNGFR ++ +++
Sbjct: 2 ILSAYERIIARRYLLPGKGEAFIFLVASISLLAVTLGVAALIIVMSVMNGFRAELFDKIV 61
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
GINGH VIQ L +++ I P V +P + + +L
Sbjct: 62 GINGHAVIQGYNGELANWRPILEATRKTPGVTSAIPLIEQPLMATHAGRVEGVLLRGMAL 121
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
N + + G+++ VIIG LA LGI GD I+++SP G TP G
Sbjct: 122 NDVNNNNLIRSNIREGHLNELKAGSNNVIIGIRLAEQLGIHAGDDISLISPAGQTTPFGT 181
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R SY V +F + DYD V M L +AQ + + V IE+ + D + + +
Sbjct: 182 VPRIVSYRVAAIFEVGVYDYDKAFVIMPLSDAQTLLMMNDTVGIIEIKTNNADRVGQILD 241
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + N V+ DW+ F
Sbjct: 242 PLKDRVANVGVLQDWRNMNASLFQAL 267
>gi|78485516|ref|YP_391441.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Thiomicrospira crunogena XCL-2]
gi|78363802|gb|ABB41767.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Thiomicrospira crunogena XCL-2]
Length = 416
Score = 130 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 78/268 (29%), Positives = 144/268 (53%), Gaps = 1/268 (0%)
Query: 3 IFS-RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+F FE+++ +RY + R+N FIS S S IG+ +GV ALI VMS+MNGF++++ R+
Sbjct: 1 MFKLPFELLLGYRYTRAKRRNGFISFISLSSIIGIGLGVTALITVMSIMNGFQQELRDRI 60
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
L + HV + ++ L +Q + + +P V P GQ ++ ++ +
Sbjct: 61 LDMTAHVTLSEQGERLNHWQDLYSVAKQLPHVEGAAPNAMGQGMLTHGDRVKGVLVRGVL 120
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ YG++S+ + VI+G +LA LG+S+GDKI +++P ++PMG
Sbjct: 121 PKYEGQVADVESKMVYGHLSDLKSKDYNVILGTELANGLGVSVGDKITLVAPQASISPMG 180
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ R K +TV G+F + +YD+ + + + +AQ F + + VS +++ + D A+
Sbjct: 181 VVPRLKRFTVSGLFEVGMHEYDSALAIVHMADAQRVFKMGHQVSALQLRLDDMFAVRDVR 240
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
E + + + + + DW Q++ FF E
Sbjct: 241 EAVAENIDDVLYMRDWTQQHSNFFKAIE 268
>gi|268589234|ref|ZP_06123455.1| lipoprotein releasing system, transmembrane protein LolC
[Providencia rettgeri DSM 1131]
gi|291315492|gb|EFE55945.1| lipoprotein releasing system, transmembrane protein LolC
[Providencia rettgeri DSM 1131]
Length = 400
Score = 130 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 59/267 (22%), Positives = 112/267 (41%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + RYL + F S +S IG+ +GV ALI V SVMNGF + +L
Sbjct: 1 MHQSVSLFIGLRYLRGRAADKFGRFVSSLSAIGITLGVAALITVTSVMNGFERSLQDSIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
++ + ++ + L + V ++ P V + ++ G GV+
Sbjct: 61 AYMPQAILTSASGNIDPAKYPISDLQHLKGVSQIAPIVQSDVVLQSRTNVGVGVMGGIDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSP-YGDVTPMG 181
L G ++ + V +G LA LG+ GD++ ++ P +TPMG
Sbjct: 121 EESSLLLDK---LVVGQRNDLKEGSYNVFLGNKLAETLGVKRGDEVRLIIPGVSQLTPMG 177
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ +TV G+F+ + +V A++ ++G +++ +P ++
Sbjct: 178 RIPSQRLFTVAGIFQTNGEADTSELVVAQQDAARMLRYPAGHITGWRLYLDEPLQVDVLS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L +G+V DW++R FF
Sbjct: 238 ---QQALPDGLVWKDWRERKGEFFQAV 261
>gi|254229020|ref|ZP_04922441.1| lipoprotein-releasing system transmembrane protein LolC [Vibrio sp.
Ex25]
gi|151938488|gb|EDN57325.1| lipoprotein-releasing system transmembrane protein LolC [Vibrio sp.
Ex25]
Length = 402
Score = 130 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 61/268 (22%), Positives = 112/268 (41%), Gaps = 7/268 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RYL + F S++S G+ IGVMAL+ V+SVMNGF + +R+L
Sbjct: 1 MYHPISLFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMALVTVLSVMNGFESQLKERIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H V+ Q + + + + P V G+A + + +G L+
Sbjct: 61 GVLPHAVVSQHDGKTPLTESAPPFVQAMSSESEPEPIVRGEAVIQSSAQLTAGYLIGIEP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S G +S+ V +G LAR+L +S+GDK+ ++
Sbjct: 121 KKGD---PISNHLIAGRLSSLQAGDYNVFLGHSLARSLKVSMGDKVRLMVTNATQFTPLG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + D D ++ +++ +A + VSG VF DP +
Sbjct: 178 RIPSQRNFTVAGIFNTGSDVDGQLMIVNMTDASKLMRFPKDTVSGWRVFFSDPFMVTDFA 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + +G DW+++ F +
Sbjct: 238 D---QPMPDGWQWSDWREQRGELFQAVK 262
>gi|294340844|emb|CAZ89239.1| putative Lipoprotein releasing system, LolC/E family [Thiomonas sp.
3As]
Length = 422
Score = 130 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 81/274 (29%), Positives = 146/274 (53%), Gaps = 9/274 (3%)
Query: 3 IFS----RFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFRE 55
+F+ FE+++ WRY S R+ N FIS S +S G+ +GV ALIVV+SVMNGF++
Sbjct: 1 MFASFSWPFELLIGWRYTRSGRRSRRNGFISFISAVSVGGIALGVAALIVVISVMNGFQK 60
Query: 56 DMIKRVLGINGHVVI-QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
++ R+L + H+ I L D++ +A ++ P V V PFV GQA V+ S
Sbjct: 61 EVRDRMLNVIPHIQILNVNGQALPDWRGVAQQVKSNPAVTGVAPFVQGQALVAQGSQLQG 120
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
++ + + Q G+++ GV++G +LA LG+ +GD+I ++ P
Sbjct: 121 VLVWGVEPSEETQVSQIPEHMVAGSLAALKPGDFGVVLGNELANALGVGVGDQITMVVPS 180
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G +TP GM R ++ V+G+F + +YD+ + ++LQ+A F +G+ V ++
Sbjct: 181 GSITPAGMIPRLRTLRVVGIFNVGHYEYDSTLALVNLQDASALFRTGGP-TGLRVQTRNM 239
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + +++ R+L +V W ++ + +F
Sbjct: 240 NDAPQIAQDLQRVLPPELVAQPWTEQNRTWFEAV 273
>gi|260768910|ref|ZP_05877844.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
furnissii CIP 102972]
gi|260616940|gb|EEX42125.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
furnissii CIP 102972]
Length = 414
Score = 130 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 56/267 (20%), Positives = 116/267 (43%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + + R+ + ++N +S S S IG+ +GV +I+ +S MNGF ++ RVL
Sbjct: 1 MLASLSLFIGSRFSRAKQRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQNRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + P+ ++Q + + P+V+ P+V A + + +
Sbjct: 61 SVIPHGEFEGVRGPVQNWQAVVAQATQDPEVLAAAPYVKFTALAERGTQLKAIEVRGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + + S S + VI+GK +A LG +GD + ++ P D +
Sbjct: 121 SMEQAVSRLSQFVTDEAWSRFVPGEQQVILGKGVADQLGAKVGDYVTLMIPTADGSSRVQ 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + D+ + + L++AQ Y L++AV+G+ + V D +
Sbjct: 181 APRRIRVQIT-GLLALNGQIDHSLALLPLEDAQQYARLDHAVTGVSIKVSDVLRANQIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ L V + WQQ++ + +
Sbjct: 240 SVGNTLNEYVYLRSWQQKFGFLYRDIQ 266
>gi|269967619|ref|ZP_06181669.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|269827706|gb|EEZ81990.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
Length = 402
Score = 130 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 63/268 (23%), Positives = 112/268 (41%), Gaps = 7/268 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RYL + F S++S G+ IGVMAL+ V+SVMNGF + +R+L
Sbjct: 1 MYHPISLFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMALVTVLSVMNGFESQLKERIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H V+ Q + + + + P V G+A + + +G L+
Sbjct: 61 GVLPHAVVSQHDGKTPMTESAPPFVQAMSSESQPEPIVRGEAVIQSSAQLTAGYLIGIEP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S G +S+ V +G LAR+L +SIGDK+ ++
Sbjct: 121 KKGD---PISNHLIAGRLSSLQAGDYNVFLGHSLARSLKVSIGDKVRLMVTNATQFTPLG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + D D ++ +++ +A + VSG VF DP +
Sbjct: 178 RIPSQRNFTVSGIFNTGSDVDGQLMIVNMTDASKLMRFPKDTVSGWRVFFSDPFMVTDFA 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
E + + +G DW+++ F +
Sbjct: 238 E---QPMPDGWEWSDWREQRGELFQAVK 262
>gi|229587058|ref|YP_002845559.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
protein [Rickettsia africae ESF-5]
gi|228022108|gb|ACP53816.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
protein [Rickettsia africae ESF-5]
Length = 416
Score = 130 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 93/265 (35%), Positives = 136/265 (51%), Gaps = 2/265 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ F +A+RY + + F+SI S S +GVMIGV ALIVVMSVMNGF ++ K ++G+
Sbjct: 4 NNFIFKIAFRYFRAKKNEKFVSIISAFSLVGVMIGVAALIVVMSVMNGFHIELTKNIIGL 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
NG +VI ++ + +Y+ I +L V V GQA S SGVLV+G+
Sbjct: 64 NGDIVINRQGGSIDNYEEIKAKLLKQDYVKHVTFIAHGQALAL-GKSNNSGVLVKGMKLK 122
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD-VTPMGMG 183
D S F ++F + +G+ LA NLG+++GDKI ++SP T G
Sbjct: 123 DLSIRNEIFKNVNFGSFDNFHGKNVIALGEQLASNLGVTVGDKIRLISPNNSVSTTFGSM 182
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
RSK + V+ +F DYD + M L AQ + +L N ++ IE+ DPD
Sbjct: 183 PRSKEFKVIAIFNSGMYDYDLTTILMPLTAAQNFLSLGNDINLIEINSLDPDKALTYSHK 242
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCY 268
I +LG + V +WQ F S
Sbjct: 243 IQSLLGPTLYVFNWQTLNSQFLSAL 267
>gi|24373812|ref|NP_717855.1| lipoprotein releasing system transmembrane protein LolC, putative
[Shewanella oneidensis MR-1]
gi|24348207|gb|AAN55299.1|AE015667_9 lipoprotein releasing system transmembrane protein LolC, putative
[Shewanella oneidensis MR-1]
Length = 416
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 53/268 (19%), Positives = 105/268 (39%), Gaps = 1/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + WR+ + + N+FIS SF S G+ +GV LI+V+S MNGF ++ +R+L
Sbjct: 1 MKGPLALSIGWRFYRARQSNSFISFISFASTAGIALGVAVLIIVLSAMNGFERELEQRLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ + P+ D++ + I + PF+ Q V +V
Sbjct: 61 GVISQADVVGVNEPIADWRAVEQTALQIEGITAAAPFIRMQGLVQKPGGFQGLAVVGIDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S + + +++G+ L + LG+ +GD + + D G
Sbjct: 121 EQEAKVSTLSQFMSPETWQSLSEDDNHIVLGESLLKKLGLEVGDTLALYVQDLDPEHAGS 180
Query: 183 GIRSKSYTVLGM-FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+KS+ + + + Y+ ++ A NL V+G+ + V
Sbjct: 181 LRAAKSHRFVVSGVYRLGGELELTTAYIPMRYAANILNLHQGVTGVRISVTQVFEAPAKI 240
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L V + DW + + +
Sbjct: 241 RELGYALNQSVYISDWTRTQGHLYQDIQ 268
>gi|34581307|ref|ZP_00142787.1| hypothetical protein [Rickettsia sibirica 246]
gi|28262692|gb|EAA26196.1| unknown [Rickettsia sibirica 246]
Length = 424
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 93/265 (35%), Positives = 136/265 (51%), Gaps = 2/265 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ F +A+RY + + F+SI S S +GVMIGV ALIVVMSVMNGF ++ K ++G+
Sbjct: 12 NNFIFKIAFRYFRAKKNEKFVSIISAFSLVGVMIGVAALIVVMSVMNGFHIELTKNIIGL 71
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
NG +VI ++ + +Y+ I +L V V GQA S SGVLV+G+
Sbjct: 72 NGDIVINRQGGSIDNYEEIKAKLLKQDYVKHVTFIAHGQALAL-GKSNNSGVLVKGMKLK 130
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD-VTPMGMG 183
D S F ++F + +G+ LA NLG+++GDKI ++SP T G
Sbjct: 131 DLSVRNEIFKNVNFGSFDNFHGKNVIALGEQLASNLGVTVGDKIRLISPNNSVSTTFGSM 190
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
RSK + V+ +F DYD + M L AQ + +L N ++ IE+ DPD
Sbjct: 191 PRSKEFKVIAIFNSGMYDYDLTTILMPLTAAQNFLSLGNDINLIEINSLDPDKALTYSHK 250
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCY 268
I +LG + V +WQ F S
Sbjct: 251 IQSLLGPTLYVFNWQTLNSQFLSAL 275
>gi|218710045|ref|YP_002417666.1| outer membrane-specific lipoprotein transporter subunit LolE
[Vibrio splendidus LGP32]
gi|218323064|emb|CAV19241.1| Lipoprotein-releasing system transmembrane protein lolE [Vibrio
splendidus LGP32]
Length = 414
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 52/267 (19%), Positives = 108/267 (40%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS +++ R+ + +++ +S S S IG+ +GV +I+ +S MNGF ++ RVL
Sbjct: 1 MFSSLSLLIGGRFSRAKQRDKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQSRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + P+ ++ + V+ P+V A + +
Sbjct: 61 SVIPHGEFEGVNKPVTRWEHVIEESVKHDKVVAAAPYVKITALAEKGKELKAIEVRGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S S+ + +I+G +A LG +GD + ++ P + +
Sbjct: 121 QLEQQVSSLSSFIDKQAWSDFKAGQQQIILGSGVANVLGAKVGDYLTLMIPTVNGSVKVQ 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ V+ D+ + + + +AQ+Y NL AV+G+ + V D
Sbjct: 181 APKRVRVKVV-GLLTLNGQIDHSLALVPIGDAQVYANLGEAVTGVSLKVTDVLNANSIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L V + WQQ++ + +
Sbjct: 240 EVGNQLDVYVYLRSWQQKFGFLYRDIQ 266
>gi|260430961|ref|ZP_05784932.1| lipoprotein releasing system transmembrane protein LolE
[Silicibacter lacuscaerulensis ITI-1157]
gi|260414789|gb|EEX08048.1| lipoprotein releasing system transmembrane protein LolE
[Silicibacter lacuscaerulensis ITI-1157]
Length = 428
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 77/275 (28%), Positives = 123/275 (44%), Gaps = 11/275 (4%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE +AWRYL + R +S+ ++IS IG+ + V ALI ++V +GFR + + +LG
Sbjct: 8 FAAFEWKIAWRYLRARRAEGGVSVMTWISLIGITLAVFALIATLAVRSGFRSEFVGTILG 67
Query: 64 INGHVVIQ---------QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
N HV + + + +Y +A R+ +P V + P V GQ ++
Sbjct: 68 ANAHVTVYSAGNIDAQGRVDRTIANYDAMAERIAQVPGVQRAAPLVKGQVLITNRDRSSG 127
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ + S + S + +G+ IG +AR +G ++GD++ + SP
Sbjct: 128 AEVFGIRPDDLLSLPGIAESDQAYG--DLTRFEEGIAIGSGVARAIGATVGDRVKLTSPN 185
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G T G R +Y V+ +F D D VYM EAQ +FN E IEV V P
Sbjct: 186 GVKTAFGTSPRVNAYEVVYVFSAGRYDIDRTRVYMPFSEAQSFFNREGVADEIEVMVDRP 245
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + I+ G V + W F E
Sbjct: 246 EDLNPILIPILEAAGERVQIWTWLDASGGFLRALE 280
>gi|296136689|ref|YP_003643931.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Thiomonas intermedia K12]
gi|295796811|gb|ADG31601.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Thiomonas intermedia K12]
Length = 422
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 80/267 (29%), Positives = 143/267 (53%), Gaps = 5/267 (1%)
Query: 6 RFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
FE+++ WRY S R+ N FIS S +S G+ +GV ALIVV+SVMNGF++++ R+L
Sbjct: 8 PFELLIGWRYTRSGRRSRRNGFISFISAVSVGGIALGVAALIVVISVMNGFQKEVRDRML 67
Query: 63 GINGHVVI-QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ H+ I L D++ +A ++ P V V PFV GQA V+ S ++
Sbjct: 68 NVIPHIQILNVNGQALPDWRGVAQQVKSNPAVTGVAPFVQGQALVAQGSQLQGVLVWGVE 127
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ + Q G+++ GV++G +LA LG+ +GD+I ++ P G +TP G
Sbjct: 128 PSEETQVSQIPEHMVAGSLAALKPGDFGVVLGNELANALGVGVGDQITMVVPSGSITPAG 187
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
M R ++ V+G+F + +YD+ + ++LQ+A F +G+ V ++ + +
Sbjct: 188 MIPRLRTLRVVGIFNVGHYEYDSTLALVNLQDASALFRTGGP-TGLRVQTRNMNDAPQIA 246
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+++ R+L +V W ++ + +F
Sbjct: 247 QDLQRVLPPELVAQPWTEQNRTWFEAV 273
>gi|157804089|ref|YP_001492638.1| hypothetical protein A1E_04640 [Rickettsia canadensis str. McKiel]
gi|157785352|gb|ABV73853.1| hypothetical protein A1E_04640 [Rickettsia canadensis str. McKiel]
Length = 415
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 92/267 (34%), Positives = 139/267 (52%), Gaps = 2/267 (0%)
Query: 3 IFSR-FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+ ++ F +A+RY S + F+SI S S +GVMIGV ALIVVMSVMNGF ++ K +
Sbjct: 1 MINQAFIFKIAFRYFRSKKNEKFVSIISAFSLVGVMIGVAALIVVMSVMNGFHIELTKNI 60
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+G+NG +VI + + +Y+ I +L + V GQA S SGVLV+GI
Sbjct: 61 IGLNGDIVINPQAGSIDNYEEIKAKLLKQDYIKHVTFIAHGQALAL-GKSNNSGVLVKGI 119
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ D S F ++F + +G +LA NLG+++GDKI ++SP T G
Sbjct: 120 NLKDLSLRNEIFKNVNFGSFDNFHSKNVIALGGELASNLGVTVGDKIRLISPSVVSTAFG 179
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
RSK + ++ +F DYD+ + M L AQ + +L N ++ IE+ DPD
Sbjct: 180 SMPRSKEFKIIAIFNSGMYDYDSATILMPLTAAQNFLSLGNDINLIEINSLDPDKALSYS 239
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ +LG + V WQ+ F S
Sbjct: 240 YKLQILLGTMLRVTSWQKLNAPFLSAL 266
>gi|114563565|ref|YP_751078.1| lipoprotein releasing system, transmembrane protein, LolC/E family
protein [Shewanella frigidimarina NCIMB 400]
gi|114334858|gb|ABI72240.1| lipoprotein releasing system, transmembrane protein, LolC/E family
protein [Shewanella frigidimarina NCIMB 400]
Length = 413
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 54/267 (20%), Positives = 107/267 (40%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + WR+ + + N FI SF S G+ +GV LIVV+S MNGF +++ R+L
Sbjct: 1 MSKWLPLTIGWRFFRARQSNGFIGFISFASTAGIALGVGVLIVVLSAMNGFEKELQDRLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H + P+ D+Q IA +P + V PFV Q V ++
Sbjct: 61 GVVSHGELVGVNQPIADWQDIAKSASNMPQITGVAPFVRLQGLVQKPGGFQGLIVNGIDI 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + +++G+ L LG+ +GD + + +P + + +
Sbjct: 121 KHESDVSSIADYMSVDAWQSLSSDENHIVLGRSLLTKLGLKVGDTLAMYTPDANNSQLTS 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + + ++ Y+SL L +AVSG+ + V +
Sbjct: 181 AKSHRFV--VSGVFELGGEIESTQAYVSLDYLADLLELGSAVSGVRIQVNNVFNAASITR 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ + + DW + + +
Sbjct: 239 DLGFAQEQYLYINDWTRTQGHLYQDIQ 265
>gi|157370243|ref|YP_001478232.1| outer membrane-specific lipoprotein transporter subunit LolC
[Serratia proteamaculans 568]
gi|157322007|gb|ABV41104.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Serratia proteamaculans 568]
Length = 400
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 55/267 (20%), Positives = 106/267 (39%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF +D+ +L
Sbjct: 1 MYQPVALFIGLRYMRGRASDRFGRFVSWLSTIGITLGVMALVTVLSVMNGFEKDLENNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ +I + Q A+ + + V +V P +G + S GV++
Sbjct: 61 GLMPQALITSPQGSVNPQQIPASAVQSLQGVSRVAPLTTGDVVLQSARSVAVGVMLGVNP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + +IIG+ LA LG+ GD + ++ P
Sbjct: 121 DEADPLTPFLVNVK---QQQLQPGQYNIIIGEQLAGQLGVKRGDPLRVMVPSASQFTPMG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I + + + D + ++ Q+A ++G +F++ P ++
Sbjct: 178 RIPIQRLFTVVGTFHANSEVDGTQMLVNQQDASRLLRYPAGNITGWRLFLQQPLTVDTLS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW++R F
Sbjct: 238 ---QQKLPQGTEWKDWRERKGELFQAV 261
>gi|56551355|ref|YP_162194.1| LolC/E family lipoprotein releasing system transmembrane protein
[Zymomonas mobilis subsp. mobilis ZM4]
gi|56542929|gb|AAV89083.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Zymomonas mobilis subsp. mobilis ZM4]
Length = 416
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 84/266 (31%), Positives = 125/266 (46%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
I S +E I+A RYL + AFI + + IS V +GV ALI+VMSVMNGFR ++ +++
Sbjct: 2 ILSAYERIIARRYLLPGKGEAFIFLVASISLFAVTLGVAALIIVMSVMNGFRAELFDKIV 61
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
GINGH VIQ L +++ I P V +P + + +L
Sbjct: 62 GINGHAVIQGYNGELANWRPILEATRKTPGVTSAIPLIEQPLMATHAGRVEGVLLRGMAL 121
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
N + + G+++ VIIG LA LGI GD I+++SP G TP G
Sbjct: 122 NDVNNNNLIRSNIREGHLNELKAGSNNVIIGIRLAEQLGIHAGDDISLISPAGQTTPFGT 181
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R SY V +F + DYD V M L +AQ + + V IE+ + D + + +
Sbjct: 182 VPRIVSYRVAAIFEVGVYDYDKAFVIMPLSDAQTLLMMNDTVGIIEIKTNNADRVGQILD 241
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + N V+ DW+ F
Sbjct: 242 PLKDRVANVGVLQDWRNMNASLFQAL 267
>gi|260753029|ref|YP_003225922.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Zymomonas mobilis subsp. mobilis NCIMB 11163]
gi|258552392|gb|ACV75338.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Zymomonas mobilis subsp. mobilis NCIMB 11163]
Length = 416
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 84/266 (31%), Positives = 126/266 (47%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
I S +E I+A RYL + AFI + + IS + V +GV ALI+VMSVMNGFR ++ +++
Sbjct: 2 ILSAYERIIARRYLLPGKGEAFIFLVASISLLAVTLGVAALIIVMSVMNGFRAELFDKIV 61
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
GINGH VIQ L +++ I P V +P + + +L
Sbjct: 62 GINGHAVIQGYNGELANWRPILEATRKTPGVTSAIPLIEQPLMATHAGRVEGVLLRGMAL 121
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
N + + G+++ VIIG LA LGI GD I+++SP G TP G
Sbjct: 122 NDVNNNNLIRSNIREGHLNELKAGSNNVIIGIRLAEQLGIHAGDDISLISPAGQTTPFGT 181
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R SY V +F + DYD V M L +AQ + + V IE+ + D + + +
Sbjct: 182 VPRIVSYRVAAIFEVGVYDYDKAFVIMPLSDAQTLLMMNDTVGIIEIKTNNADRVGQILD 241
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + N V+ DW+ F
Sbjct: 242 PLKDRVVNVGVLQDWRNMNASLFQAL 267
>gi|297579399|ref|ZP_06941327.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297536993|gb|EFH75826.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 414
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 55/267 (20%), Positives = 111/267 (41%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS + + R+ + ++N +S S S IG+ +GV +I+ +S MNGF ++ RVL
Sbjct: 1 MFSSLALFIGGRFSRAKQRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + P+ + + + P ++ P+V A + + +
Sbjct: 61 SVIPHGEFEGVRGPVERWPDLMAQAARHPQIVAAAPYVKITALAESGTQLKAIEVRGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + S + VI+G+ +A LG+ +GD I ++ P +
Sbjct: 121 QREQAVSRLSQFITAQAWQEFRPGQQQVILGQGVAEKLGVQVGDFITLMIPSATSGDK-V 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + + L++AQ Y +L + V+GI V V D +
Sbjct: 180 QAPKRVRVKVSGLLALNGQIDHSLALLPLEDAQAYAHLGSGVTGISVKVADVLQATQIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ L V + WQQ+Y + +
Sbjct: 240 DVGNQLSEYVYLHSWQQKYGFLYRDIQ 266
>gi|15892999|ref|NP_360713.1| hypothetical protein RC1076 [Rickettsia conorii str. Malish 7]
gi|15620197|gb|AAL03614.1| unknown [Rickettsia conorii str. Malish 7]
Length = 452
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 93/265 (35%), Positives = 136/265 (51%), Gaps = 2/265 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ F +A+RY + + F+SI S S +GVMIGV ALIVVMSVMNGF ++ K ++G+
Sbjct: 40 NNFIFKIAFRYFRAKKNEKFVSIISAFSLVGVMIGVAALIVVMSVMNGFHIELTKNIIGL 99
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
NG +VI ++ + +Y+ I +L V V GQA S SGVLV+G+
Sbjct: 100 NGDIVINRQGGSIDNYEEIKAKLLKQDYVKHVTFIAYGQALAL-GKSNNSGVLVKGMKLK 158
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD-VTPMGMG 183
D S F ++F + +G+ LA NLG+++GDKI ++SP T G
Sbjct: 159 DLSVRNEIFKNVNFGSFDNFHGKNVIALGEQLASNLGVTVGDKIRLISPNNSVSTTFGSM 218
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
RSK + V+ +F DYD + M L AQ + +L N ++ IE+ DPD
Sbjct: 219 PRSKEFKVIAIFNSGMYDYDLTTILMPLTAAQNFLSLGNDINLIEINSLDPDKALTYSHK 278
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCY 268
I +LG + V +WQ F S
Sbjct: 279 IQLLLGPTLYVFNWQTLNSQFLSAL 303
>gi|254509482|ref|ZP_05121549.1| lipoprotein releasing system transmembrane protein LolE
[Rhodobacteraceae bacterium KLH11]
gi|221533193|gb|EEE36181.1| lipoprotein releasing system transmembrane protein LolE
[Rhodobacteraceae bacterium KLH11]
Length = 487
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 76/275 (27%), Positives = 122/275 (44%), Gaps = 11/275 (4%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE +AWRYL + R +S+ ++IS IG+ + V ALI ++V +GFR + + +LG
Sbjct: 67 FAPFEWKIAWRYLRARRAEGGVSVMTWISLIGITLAVFALIATLAVRSGFRSEFVGTILG 126
Query: 64 INGHVVIQ---------QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
N HV + + + D+ +A R+ +P V + P V GQ ++
Sbjct: 127 ANAHVSVYSAGDLNAQGRLDRTIADFDAMAERVAQVPGVERAAPLVKGQVLITNADRSTG 186
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ + + S + G+ IG +AR +G ++GD++ + SP
Sbjct: 187 VQVFGIRPDDLNDLPGIAESEQAYG--DLSRFPDGIAIGSGVARAIGATVGDRVKLTSPN 244
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G T G R +Y V+ +F D D VYM EAQ +FN E IEV V+ P
Sbjct: 245 GVKTAFGTSPRVNAYEVVYVFSAGRFDIDRTRVYMPFTEAQSFFNREGVADEIEVMVERP 304
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + I+ G + WQ F E
Sbjct: 305 EELSPILIPILEAAGERSQIWTWQDASGGFLRALE 339
>gi|153830810|ref|ZP_01983477.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|148873717|gb|EDL71852.1| conserved hypothetical protein [Vibrio cholerae 623-39]
Length = 414
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 55/267 (20%), Positives = 111/267 (41%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS + + R+ + ++N +S S S IG+ +GV +I+ +S MNGF ++ RVL
Sbjct: 1 MFSSLALFIGGRFSRAKQRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + P+ + + + P ++ P+V A + + +
Sbjct: 61 SVIPHGEFEGVRGPVERWPDLMAQAARHPQIVAAAPYVKITALAESGTQLKAIEVRGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + S + VI+G+ +A LG+ +GD I ++ P +
Sbjct: 121 QREQAVSRLSQFITAQAWQEFRPGQQQVILGQGVAEKLGVQVGDFITLMIPSATSGDK-V 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + + L++AQ Y +L + V+GI V V D +
Sbjct: 180 QAPKRVRVKVSGLLALNGQIDHSLALLPLEDAQAYAHLGSGVTGISVKVADVLQATQIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ L V + WQQ+Y + +
Sbjct: 240 DVGNQLSEYVYLHSWQQKYGFLYRDIQ 266
>gi|153825231|ref|ZP_01977898.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|229520342|ref|ZP_04409768.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
cholerae TM 11079-80]
gi|254226047|ref|ZP_04919646.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|254286762|ref|ZP_04961716.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|125621430|gb|EAZ49765.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|149741210|gb|EDM55261.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|150423189|gb|EDN15136.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|229342708|gb|EEO07700.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
cholerae TM 11079-80]
gi|327484428|gb|AEA78835.1| Lipoprotein releasing system transmembrane protein LolE [Vibrio
cholerae LMA3894-4]
Length = 414
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 55/267 (20%), Positives = 111/267 (41%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS + + R+ + ++N +S S S IG+ +GV +I+ +S MNGF ++ RVL
Sbjct: 1 MFSSLALFIGGRFSRAKQRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + P+ + + + P ++ P+V A + + +
Sbjct: 61 SVIPHGEFEGVRGPVERWPDLMAQAARHPQIVAAAPYVKITALAESGTQLKAIEVRGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + S + VI+G+ +A LG+ +GD I ++ P +
Sbjct: 121 QREQAVSRLSQFITAQAWQEFRPGQQQVILGQGVAEKLGVQVGDFITLMIPSATSGDK-V 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + + L++AQ Y +L + V+GI V V D +
Sbjct: 180 QAPKRVRVKVSGLLALNGQIDHSLALLPLEDAQAYAHLGSGVTGISVKVADVLQATQIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ L V + WQQ+Y + +
Sbjct: 240 DVGNQLSEYVYLHSWQQKYGFLYRDIQ 266
>gi|153835234|ref|ZP_01987901.1| lipoprotein-releasing system transmembrane protein LolC [Vibrio
harveyi HY01]
gi|148868272|gb|EDL67406.1| lipoprotein-releasing system transmembrane protein LolC [Vibrio
harveyi HY01]
Length = 405
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 63/268 (23%), Positives = 115/268 (42%), Gaps = 7/268 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RYL + F S++S G+ IGVMAL+ V+SVMNGF + +R+L
Sbjct: 4 MYHPISLFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMALVTVLSVMNGFEAQLKERIL 63
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H V+ Q + + + + + P V G+A + + +G L+
Sbjct: 64 GVLPHAVVSQHDGKTPMSETAPQFIQNMSTIAEPEPIVRGEAVIQSSAQLTAGYLIGI-- 121
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S G +S+ V +G LAR+L +S+GDK+ ++
Sbjct: 122 -EPKLGDPISNHLIAGRLSSLQAGEYKVFLGHSLARSLKVSMGDKVRLMVTNATQFTPLG 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + D D ++ +++ +A L +AVSG VF DP + +
Sbjct: 181 RIPSQRNFTVAGIFNTGSDVDGQLMIVNMTDASKLMRLPKDAVSGWRVFFTDPFMVTEFA 240
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + G DW+++ F +
Sbjct: 241 D---KPMPEGWQWSDWREQRGELFQAVK 265
>gi|89075819|ref|ZP_01162203.1| putative ABC transporter, integral membrane protein [Photobacterium
sp. SKA34]
gi|89048440|gb|EAR54016.1| putative ABC transporter, integral membrane protein [Photobacterium
sp. SKA34]
Length = 416
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 56/268 (20%), Positives = 113/268 (42%), Gaps = 1/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + R+ S ++N +S S S +G+ +GV +IV +S MNGF ++ RVL
Sbjct: 1 MFRPLSLYIGSRFNRSKKRNRMVSFISMSSMLGIAVGVAVIIVGLSAMNGFERELQTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ +Q PL ++Q + +++ PDV P+V A + + + +
Sbjct: 61 SVIPQGELQAVEPPLNNWQPLVKKIEKHPDVTAAAPYVEFTALLEKGTKLKAVGVRGVNP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK-INILSPYGDVTPMG 181
+ S K VI+G+ +A++L + +GD ++ P D
Sbjct: 121 QEQLKVSELPSYVLNDAWSKFTAGKKEVILGQGVAKSLNVKVGDWLTTMIIPNADPEMTQ 180
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ + + + D+ + + L +AQ Y ++ VSGI++ V ++
Sbjct: 181 LRAPHRIRLQVAGILALGGEIDHKLAIVPLADAQKYMDMGQGVSGIQINVDKVLEAQRIV 240
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + L V + W Q+Y + +
Sbjct: 241 KEVGNTLPVYVYLKSWTQQYGYMYRDIQ 268
>gi|229515262|ref|ZP_04404722.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
cholerae TMA 21]
gi|229347967|gb|EEO12926.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
cholerae TMA 21]
Length = 414
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 55/267 (20%), Positives = 111/267 (41%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS + + R+ + ++N +S S S IG+ +GV +I+ +S MNGF ++ RVL
Sbjct: 1 MFSSLALFIGGRFSRAKQRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + P+ + + + P ++ P+V A + + +
Sbjct: 61 SVIPHGEFEGVRGPVERWPDLMAQAARHPQILAAAPYVKITALAESGTQLKAIEVRGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + S + VI+G+ +A LG+ +GD I ++ P +
Sbjct: 121 QREQAVSRLSQFITAQAWQEFRPGQQQVILGQGVAEKLGVQVGDFITLMIPSATSGDK-V 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + + L++AQ Y +L + V+GI V V D +
Sbjct: 180 QAPKRVRVKVSGLLALNGQIDHSLALLPLEDAQAYAHLGSGVTGISVKVADVLQATQIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ L V + WQQ+Y + +
Sbjct: 240 DVGNQLSEYVYLHSWQQKYGFLYRDIQ 266
>gi|229523901|ref|ZP_04413306.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
cholerae bv. albensis VL426]
gi|229337482|gb|EEO02499.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
cholerae bv. albensis VL426]
Length = 414
Score = 129 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 56/267 (20%), Positives = 111/267 (41%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS + + R+ + ++N +S S S IG+ +GV +I+ +S MNGF ++ RVL
Sbjct: 1 MFSSLALFIGGRFSRAKQRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + P+ + + + P +I P+V A + + +
Sbjct: 61 SVIPHGEFEGVRGPVERWPDLMAQAARHPQIIAAAPYVKITALAESGTQLKAIEVRGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + S + VI+G+ +A LG+ +GD I ++ P +
Sbjct: 121 QREQAVSRLSQFITAQAWQEFRPGQQQVILGQGVAEKLGVQVGDFITLMIPSATSGDK-V 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + + L++AQ Y +L + V+GI V V D +
Sbjct: 180 QAPKRVRVKVSGLLALNGQIDHSLALLPLEDAQAYAHLGSGVTGISVKVADVLQATQIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ L V + WQQ+Y + +
Sbjct: 240 DVGNQLSEYVYLHSWQQKYGFLYRDIQ 266
>gi|226226986|ref|YP_002761092.1| lipoprotein releasing system transmembrane protein LolC
[Gemmatimonas aurantiaca T-27]
gi|226090177|dbj|BAH38622.1| lipoprotein releasing system transmembrane protein LolC
[Gemmatimonas aurantiaca T-27]
Length = 416
Score = 129 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 73/276 (26%), Positives = 123/276 (44%), Gaps = 10/276 (3%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+R E+ +AWRYL S R + +S+ S I+ GV++GV ALIV+M VM G + DM +++L
Sbjct: 1 MTRLELSIAWRYLRSRRGSRLLSLISVIAIGGVLVGVSALIVIMGVMTGMQTDMREKILV 60
Query: 64 INGH--VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR-- 119
+ V+ + +Q + ++ P V+ PFVS Q V LS +G V
Sbjct: 61 GSPDVRVLPYGDDMRMTGWQPLLEKVRVFPGVVSAAPFVSTQGLVRNLSGYMTGTAVVGL 120
Query: 120 ---GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
+D + ++ +++ + G +GK LA L GD I +L G
Sbjct: 121 VGANEPGADVTSIRKHIVLGDFSLAREGVSLPGAALGKFLASKLNAFPGDTIVLLGAAGL 180
Query: 177 VTPMGMGIRSKSYTVLG---MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKD 233
G + +F +YD+ +++ L AQ + L + V+GIE D
Sbjct: 181 DMNAATGAIVPRADSVVVAGVFETGMYEYDDAYLFLPLAAAQRFAGLGDDVTGIEARTTD 240
Query: 234 PDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+++ L V +DWQ+ + FF +
Sbjct: 241 RWQTPAIADSLEVSLNAPVRAVDWQENNRSFFQALK 276
>gi|153213070|ref|ZP_01948608.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|124116117|gb|EAY34937.1| conserved hypothetical protein [Vibrio cholerae 1587]
Length = 414
Score = 129 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 56/267 (20%), Positives = 111/267 (41%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS + + R+ + ++N +S S S IG+ +GV +I+ +S MNGF ++ RVL
Sbjct: 1 MFSSLALFIGGRFSRAKQRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + P+ + + + P +I P+V A + + +
Sbjct: 61 SVIPHGEFEGVRGPVERWPDLMAQAARHPQIIAAAPYVKITALAESGTQLKAIEVRGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + S + VI+G+ +A LG+ +GD I ++ P +
Sbjct: 121 QREQAVSRLSQFITAQAWQEFRPGQQQVILGQGVAEKLGVQVGDFITLMIPSATSGDK-V 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + + L++AQ Y +L + V+GI V V D +
Sbjct: 180 QAPKRVRVKVSGLLALNGQIDHSLALLPLEDAQAYAHLGSGVTGISVKVADVLQATQIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ L V + WQQ+Y + +
Sbjct: 240 DVGNQLSEYVYLHSWQQKYGFLYRDIQ 266
>gi|229529096|ref|ZP_04418486.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
cholerae 12129(1)]
gi|229332870|gb|EEN98356.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
cholerae 12129(1)]
Length = 414
Score = 129 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 55/267 (20%), Positives = 111/267 (41%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS + + R+ + ++N +S S S IG+ +GV +I+ +S MNGF ++ RVL
Sbjct: 1 MFSSLALFIGGRFSRAKQRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + P+ + + + P ++ P+V A + + +
Sbjct: 61 SVIPHGEFEGVRGPVERWPDLMAQAARHPQIVAAAPYVKITALAESGTQLKAIEVRGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + S + VI+G+ +A LG+ +GD I ++ P +
Sbjct: 121 QREQAVSRLSQFITAQAWQEFRPGQQQVILGQGVAEKLGVQVGDFITLMIPSATSGDK-V 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + + L++AQ Y +L + V+GI V V D +
Sbjct: 180 QAPKRVRVKVSGLLALNGQIDHSLALLPLEDAQAYAHLGSGVTGISVKVADVLQATQIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ L V + WQQ+Y + +
Sbjct: 240 DVGNQLSEYVYLHSWQQKYGFLYRDIQ 266
>gi|238754401|ref|ZP_04615757.1| Lipoprotein-releasing system transmembrane protein lolC [Yersinia
ruckeri ATCC 29473]
gi|238707434|gb|EEP99795.1| Lipoprotein-releasing system transmembrane protein lolC [Yersinia
ruckeri ATCC 29473]
Length = 400
Score = 129 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 59/267 (22%), Positives = 108/267 (40%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMALI V+SVMNGF D+ +L
Sbjct: 1 MYQPVALFIGLRYMRGRASDRFGRFVSWLSTIGITLGVMALITVLSVMNGFERDLQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ +I L + A+ L + V V L S S + +
Sbjct: 61 GLMPQALITTPKGALDPEKIPASALKNLSG---VSDIVPLTTGEVVLQSPRSVNVGVMLG 117
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + S S ++ + +I+G+ LA LG+S G+ I ++ P
Sbjct: 118 INPDQHEPLSDSLVNVHLRDLQPGQYNLIMGEKLAGKLGVSRGETIRLMVPSASQFTPMG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D+ + ++ Q+A ++G +F+ P ++
Sbjct: 178 RIPSQRLFNVIGTFAAGSEVDDYQLLVNQQDASRLMRYPAGHITGWRLFLSHPLQVDNLS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G V DW++R F
Sbjct: 238 ---QQTLPEGTVWKDWRERKGELFQAV 261
>gi|297181317|gb|ADI17508.1| ABC-type transport system, involved in lipoprotein release,
permease component [uncultured bacterium HF0130_06E03]
Length = 420
Score = 129 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 57/279 (20%), Positives = 116/279 (41%), Gaps = 14/279 (5%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ VA RYL S + + FIS+ ++++ GV++GV ALI+++SV NGF ++ R++G+
Sbjct: 1 MNVSLYVARRYLTSKKASGFISVIAYLAMGGVVLGVAALIIILSVTNGFSGEIKNRLIGM 60
Query: 65 NGHV-VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFV-----------SGLSSG 112
N H+ + + P+ +Y + + L DV+ P + + + +
Sbjct: 61 NAHINIRRFDGEPITNYHALIDSLSEWSDVVGAAPVIDSKVIIVSKRDFGRVDGIPIWGI 120
Query: 113 GSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK--GVIIGKDLARNLGISIGDKINI 170
+ S + G+V + +G G + + L G +
Sbjct: 121 DPKNFPKVSDLSKHLLYSDREEILLGDVEGEDQKGIILGEYLARRLKVGPGFEVLLFTVR 180
Query: 171 LSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVF 230
+ G+ ++ + ++ F YD+ ++ L++AQ + + V+ I +
Sbjct: 181 NIDVENTVLDGLVPKTWPFLIVDHFESGMYQYDDNYAFIHLKDAQRILGIGDVVTDIHIR 240
Query: 231 VKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
VKD + E++ + DW Q + FF E
Sbjct: 241 VKDIYTAPEIGESLAETFKYPYRISDWTQLFPEFFRWIE 279
>gi|148980816|ref|ZP_01816226.1| outer membrane-specific lipoprotein transporter subunit LolE
[Vibrionales bacterium SWAT-3]
gi|145961051|gb|EDK26372.1| outer membrane-specific lipoprotein transporter subunit LolE
[Vibrionales bacterium SWAT-3]
Length = 414
Score = 129 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 51/267 (19%), Positives = 111/267 (41%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS +++ R+ + +++ +S S S IG+ +GV +I+ +S MNGF ++ RVL
Sbjct: 1 MFSSLSLLIGGRFSRAKQRDKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELESRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + P+ ++ + + + V+ P+V A + +
Sbjct: 61 SVIPHGEFEGVNEPVTRWEHVVEQSEKNDKVVAAAPYVKITALAEKGKELKAIEVRGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S S+ + +I+G +A LG +GD + ++ P + + +
Sbjct: 121 LLEQQVSSLSSFIDKQVWSDFKAGQQQIILGSGVANVLGAQVGDYMTLMIPTVNG-SVKV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + + + +AQ+Y NL AV+G+ + V D +
Sbjct: 180 QAPKRVRVKVAGLLTLNGQIDHSLALIPIGDAQVYANLGEAVTGVSLKVTDVLNANEIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L V + WQQ++ + +
Sbjct: 240 EVGNQLDVYVYLRSWQQKFGFLYRDIQ 266
>gi|183179495|ref|ZP_02957706.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|183012906|gb|EDT88206.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
Length = 414
Score = 129 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 55/267 (20%), Positives = 111/267 (41%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS + + R+ + ++N +S S S IG+ +GV +I+ +S MNGF ++ RVL
Sbjct: 1 MFSSLALFIGGRFSRAKQRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + P+ + + + P ++ P+V A + + +
Sbjct: 61 SVIPHGEFEGVRGPVERWPDLMAQAARQPQIVAAAPYVKITALAESGTQLKAIEVRGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + S + VI+G+ +A LG+ +GD I ++ P +
Sbjct: 121 QREQAVSRLSQFITAQAWQEFRPGQQQVILGQGVAEKLGVQVGDFITLMIPSATSGDK-V 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + + L++AQ Y +L + V+GI V V D +
Sbjct: 180 QAPKRVRVKVSGLLALNGQIDHSLALLPLEDAQAYAHLGSGVTGISVKVADVLQATQIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ L V + WQQ+Y + +
Sbjct: 240 DVGNQLSEYVYLHSWQQKYGFLYRDIQ 266
>gi|319405681|emb|CBI79304.1| ABC transporter, permease protein [Bartonella sp. AR 15-3]
Length = 427
Score = 129 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 109/266 (40%), Positives = 167/266 (62%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS ++ ++A+RY+ N+K+ F SI S IS IG+M+GV AL+VVM+VMNGFR +++ R+LG
Sbjct: 14 FSSYQWMIAFRYMIPNKKHMFTSIISIISLIGIMLGVFALVVVMAVMNGFRTELLSRILG 73
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGH+V+Q DY + + L+ I D+ VLP + GQA V G GG+G LVRG+
Sbjct: 74 MNGHLVVQTIDSNFTDYNILISSLESIKDIKFVLPIIEGQALVQGNIEGGTGALVRGVRQ 133
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D L+ FD+ +GV IG LA LG+++G + I++P GD TP G+
Sbjct: 134 EDLRKLKTVAQNIISGTLAQFDKEEGVAIGSALAEKLGLTVGSNLRIITPNGDDTPFGVT 193
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K+Y V+ +F + +YD+ V+M L EAQ++FNL+ + +E+F+ DPDAI++
Sbjct: 194 PRVKAYKVIAIFEVGMSEYDSIFVFMPLHEAQIFFNLDEKIQSLELFLNDPDAIDQIKPI 253
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
I + + + +IDW+ R Q FFS +
Sbjct: 254 IEKTVIQPINIIDWRMRNQAFFSALQ 279
>gi|260772490|ref|ZP_05881406.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
metschnikovii CIP 69.14]
gi|260611629|gb|EEX36832.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
metschnikovii CIP 69.14]
Length = 414
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 56/267 (20%), Positives = 113/267 (42%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F+ +++ R+ + ++N +S + S +G+ +GV +I+ +S MNGF ++ +RVL
Sbjct: 1 MFADLALVIGARFSRAKQRNKLVSFIALSSTLGIAVGVAVIIIGLSAMNGFERELQQRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + P+ + I + P V P+V A V + + + +
Sbjct: 61 SVIPHGEFEGVRGPIEHWPDIVQKSTQHPQVQAAAPYVKFTALVERGAQLKAIEVRGVDT 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + + G + VI+GK +A L ++GD I +L P +
Sbjct: 121 QRERAVSRLADYVTPGVWEAFVPAQQQVILGKGVADQLQAAVGDWITLLIPSSHT-GQAV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + + L++AQ Y NL + V+G+ + V D +
Sbjct: 180 QAPKRVRVKVAGLLELNGQIDHNLALLPLEDAQQYSNLNDKVTGVSIKVSDVLKANQIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L V + WQQ+Y + E
Sbjct: 240 EVGNTLEEYVYLRSWQQKYGFLYRDIE 266
>gi|33592244|ref|NP_879888.1| lipoprotein releasing system transmembrane protein [Bordetella
pertussis Tohama I]
gi|33571889|emb|CAE41405.1| lipoprotein releasing system transmembrane protein [Bordetella
pertussis Tohama I]
Length = 410
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 65/261 (24%), Positives = 124/261 (47%), Gaps = 7/261 (2%)
Query: 16 LFSNR--KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQ- 72
+ R ++ FIS + S G+ +GV ALIVV+SVMNGF++++ R+L + H+ +
Sbjct: 4 IRQRRGCRDRFISFIAATSMAGIALGVAALIVVLSVMNGFQKEVRDRMLSVLPHIELYIP 63
Query: 73 ---KYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
L ++ A P+V PFV+ Q + + + ++ +
Sbjct: 64 GAAPERVLQQWRQFAQAARANPEVKGEAPFVAAQGMLVRGQALRGVQVRGIDPATEGNVS 123
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
G +S+ G G ++G DLA LG+ GD + +L+P G ++P G R + +
Sbjct: 124 DIPRQMVSGKLSDLVAGGFGAVLGSDLADGLGVKTGDTVLMLAPQGSISPAGFAPRMRQF 183
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
TV+G+F +YD+ +V++ ++A F G+ + V D + + ++L
Sbjct: 184 TVVGIFSSGHYEYDSTLVFIDDEDAAKVFRESGTA-GVRLRVADMQRAPEVAAELTKVLP 242
Query: 250 NGVVVIDWQQRYQIFFSCYES 270
V+ DW + + +F+ ++
Sbjct: 243 PYVMAADWSRNNRTWFAAVQT 263
>gi|45441566|ref|NP_993105.1| outer membrane-specific lipoprotein transporter subunit LolC
[Yersinia pestis biovar Microtus str. 91001]
gi|45436427|gb|AAS61982.1| lipoprotein releasing system, transmembrane protein [Yersinia
pestis biovar Microtus str. 91001]
Length = 399
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 102/267 (38%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMALI V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRASDRFGRFVSWLSTIGITLGVMALITVLSVMNGFERNLQDTIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ +I L + A+ L + V V L S + +
Sbjct: 61 GLMPQALITTPQGSLDPNKIPASTLKSLSG---VSDIVPLTTADVVLQSARNLAAGVMLG 117
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++ +I+G+ LA LG+ G+ + ++ P
Sbjct: 118 VDPQQHEPLANYLVNVDIKALAPGSYNIILGEKLAGQLGVKRGETLRLMVPSASQFTPMG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + ++ Q+A ++G +F+ P +++
Sbjct: 178 RIPSQRVFNIIGTFAANSEVDGYQILVNQQDASRLMRYPLGNITGWRLFLSQPLSVDSLS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G V DW+ R F
Sbjct: 238 ---QQSLPEGTVWKDWRDRKGELFQAV 261
>gi|91225266|ref|ZP_01260434.1| hypothetical protein V12G01_20903 [Vibrio alginolyticus 12G01]
gi|91189905|gb|EAS76177.1| hypothetical protein V12G01_20903 [Vibrio alginolyticus 12G01]
Length = 414
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 54/267 (20%), Positives = 109/267 (40%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F+ +++ R+ + ++N +S S S IG+ +GV +I+ +S MNGF ++ RVL
Sbjct: 1 MFTSLALMIGGRFSQAKKRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQSRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H ++ PL DY N+ V+ P+V S + +
Sbjct: 61 SVIPHGELEGVNGPLHDYTKTMNQALKHEHVVAAAPYVRFTGLAEKGSKLKAIEVRGVEP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + S N + + VI+G+ +A L +++GD + ++ P +
Sbjct: 121 TFEQAVSSLSNFIDQEAWQNFYAGQQQVILGRGVANELNVAVGDYVTLMIPQAGG-ANKV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + F D+ + + L +AQ Y L V+GI + D
Sbjct: 180 QAPKRVRVKVSGFLTLNGQIDHSLALVPLADAQQYARLGEGVTGISLKTDDVLNAPTIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ ++ V + WQQ++ + +
Sbjct: 240 EVGSMVDVYVYLKSWQQKFGFLYRDIQ 266
>gi|153000911|ref|YP_001366592.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Shewanella baltica OS185]
gi|160875619|ref|YP_001554935.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Shewanella baltica OS195]
gi|151365529|gb|ABS08529.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella baltica OS185]
gi|160861141|gb|ABX49675.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella baltica OS195]
gi|315267807|gb|ADT94660.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella baltica OS678]
Length = 416
Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats.
Identities = 53/268 (19%), Positives = 105/268 (39%), Gaps = 1/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + WR+ + + N+FIS SF S G+ +GV LI+V+S MNGF ++ R+L
Sbjct: 1 MKGPLALSIGWRFYRARQSNSFISFISFASTAGIALGVAVLIIVLSAMNGFERELEHRLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ I P+ ++Q +A I + PF+ Q V +V
Sbjct: 61 GVVPQADIVGVSEPIANWQSVAEGALLIEGIRGAAPFIRMQGLVQKPGGFQGLAVVGIDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + + +++G+ L LG+ +GD + + D G
Sbjct: 121 KEEIKVSTLAQFMSDASWQSLGQDENNIVLGQSLLTKLGLEVGDTLALYVQDLDPEAAGS 180
Query: 183 GIRSKSYTVLGM-FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+KS+ + + + Y+ +Q A N+++ V+G+ + V
Sbjct: 181 LRAAKSHRFVVSGAYNLGGELELTTAYIPMQYAAQILNMKSGVTGVRISVDKVFDAPVKV 240
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ V + DW + + +
Sbjct: 241 RELGYAQKQSVYISDWTRTQGHLYQDIQ 268
>gi|160875621|ref|YP_001554937.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Shewanella baltica OS195]
gi|160861143|gb|ABX49677.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella baltica OS195]
gi|315267809|gb|ADT94662.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella baltica OS678]
Length = 410
Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats.
Identities = 69/271 (25%), Positives = 117/271 (43%), Gaps = 5/271 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ F + +RY + + NAF S + + G+ +GV ALIVV SVMNG + +R+L
Sbjct: 1 MNPGFPFYIGYRYWRARKANAFASFITLFAVSGIFLGVAALIVVSSVMNGLEGQLKQRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G + + + PLVD+ A+ L +P V+ V P VS QA V +S + +
Sbjct: 61 GAVPQLTLYSEA-PLVDWTEQASALKALPGVLGVTPSVSTQAMVQSAASIRAVQVYGVFP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G VI+G +LAR L ++ GD + +LS G V
Sbjct: 120 ELAEKLSSVAQHTYSGAFEQLTSGDYKVILGSELARQLKVAPGDTVRLLSGDGVVYSPLG 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTH 241
+ S+ ++ D G+ Y+ Q+A+ + +S + +++ DP +
Sbjct: 180 PVPSQRKFLVSGIFEMGSQVDAGVAYIHYQDAKRLMRQPSKEISQLRLYLADPFSAPALA 239
Query: 242 ENIVRIL---GNGVVVIDWQQRYQIFFSCYE 269
+ IL G DW+ Y F +
Sbjct: 240 PKVQDILAKQGLKATTSDWRDTYGHLFGAVK 270
>gi|304408991|ref|ZP_07390612.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella baltica OS183]
gi|307302994|ref|ZP_07582749.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella baltica BA175]
gi|304352812|gb|EFM17209.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella baltica OS183]
gi|306913354|gb|EFN43776.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella baltica BA175]
Length = 410
Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats.
Identities = 68/271 (25%), Positives = 116/271 (42%), Gaps = 5/271 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ F + +RY + + NAF S + + G+ +GV ALIVV SVMNG + +R+L
Sbjct: 1 MNPGFPFYIGYRYWRARKANAFASFITLFAVSGIFLGVAALIVVSSVMNGLEGQLKQRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G + + + PLVD+ A+ L +P V+ V P VS QA V +S + +
Sbjct: 61 GAVPQLTLYSEA-PLVDWTEQASALKALPGVLGVTPSVSTQAMVQSATSIRAVQVYGVFP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G VI+G +LAR L ++ GD + +LS G V
Sbjct: 120 ELAEKLSSVAQHTYSGAFEQLTSGDYKVILGSELARQLKVAPGDTVRLLSGDGVVYSPLG 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTH 241
+ S+ ++ D G+ Y+ Q+A+ + + + +++ DP +
Sbjct: 180 PVPSQRKFLVSGIFEMGSQVDAGVAYIHYQDAKRLMRQPSEAIDQLRLYLADPFSAPALA 239
Query: 242 ENIVRIL---GNGVVVIDWQQRYQIFFSCYE 269
+ IL G DW+ Y F +
Sbjct: 240 PKVQDILAKQGVKATTSDWRDTYGHLFGAVK 270
>gi|310815330|ref|YP_003963294.1| lipoprotein releasing system transmembrane protein LolE
[Ketogulonicigenium vulgare Y25]
gi|308754065|gb|ADO41994.1| lipoprotein releasing system transmembrane protein LolE
[Ketogulonicigenium vulgare Y25]
Length = 428
Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats.
Identities = 79/274 (28%), Positives = 126/274 (45%), Gaps = 11/274 (4%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+RFE ++AWRYL + + +S+ ++IS IGV + V AL+ +++ GFRE+ + +LG
Sbjct: 8 FARFEWMIAWRYLRARKAEGGVSVMTWISLIGVTLAVFALVATLAIREGFREEFVDSILG 67
Query: 64 INGHVVIQQKYYPL---------VDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
N HV + Q DYQ +A L +P V + P V A +
Sbjct: 68 ANAHVTMMQYPVMDSAGSNDRTITDYQAMAADLAAVPGVTRAAPLVRATALATAGQYNAP 127
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ + + + DF GV IG +A++LG+ +GD I I SP
Sbjct: 128 VDIYGISAADLATIPSIADPANQQGSLADF--EGGVAIGSGVAQSLGLQVGDSIRITSPN 185
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G TPMG+ R+ +YTV +F D D +YM L +AQ + N + IEV V DP
Sbjct: 186 GARTPMGVVPRANAYTVTMIFSAGRYDIDRVRLYMPLADAQSFLNRDGVADEIEVMVADP 245
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ ++ ++ G + W+ +
Sbjct: 246 ENVDAIVPALMNAAGPRAMPWTWKDSAGAYLRAL 279
>gi|126174615|ref|YP_001050764.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Shewanella baltica OS155]
gi|125997820|gb|ABN61895.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella baltica OS155]
Length = 416
Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats.
Identities = 53/268 (19%), Positives = 105/268 (39%), Gaps = 1/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + WR+ + + N+FIS SF S G+ +GV LI+V+S MNGF ++ R+L
Sbjct: 1 MKGPLALSIGWRFYRARQSNSFISFISFASTAGIALGVAVLIIVLSAMNGFERELEHRLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ I P+ ++Q +A I + PF+ Q V +V
Sbjct: 61 GVVPQADIVGVSEPIANWQSVAEGALLIDGIRGAAPFIRMQGLVQKPGGFQGLAVVGIDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + + +++G+ L LG+ +GD + + D G
Sbjct: 121 KEEIKVSTLAQFMSDASWQSLGQDENNIVLGQSLLTKLGLEVGDTLALYVQDMDPEAAGS 180
Query: 183 GIRSKSYTVLGM-FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+KS+ + + + Y+ +Q A N+++ V+G+ + V
Sbjct: 181 LRAAKSHRFVVSGAYNLGGELELTTAYIPMQYAAQILNMKSGVTGVRISVDKVFDAPVKV 240
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ V + DW + + +
Sbjct: 241 RELGYAQKQSVYISDWTRTQGHLYQDIQ 268
>gi|126174617|ref|YP_001050766.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Shewanella baltica OS155]
gi|125997822|gb|ABN61897.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella baltica OS155]
Length = 410
Score = 128 bits (321), Expect = 8e-28, Method: Composition-based stats.
Identities = 68/271 (25%), Positives = 114/271 (42%), Gaps = 5/271 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ F + +RY + + NAF S + + G+ +GV ALIVV SVMNG + +R+L
Sbjct: 1 MNPGFPFYIGYRYWRARKANAFASFITLFAVSGIFLGVAALIVVSSVMNGLEGQLKQRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G + PLVD+ A+ L +P V+ V P VS QA V +S + +
Sbjct: 61 GAVP-QLTVYSEAPLVDWTEQASALKALPGVLGVTPSVSTQAMVQSAASIRAVQVYGVFP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G VI+G +LAR L ++ GD + +LS G V
Sbjct: 120 ELAEKLSSVAQHTYSGAFEQLTSGDYKVILGSELARQLKVAPGDTVRLLSGDGVVYSPLG 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTH 241
+ S+ ++ D G+ Y+ Q+A+ + + + +++ DP +
Sbjct: 180 PVPSQRKFLVSGIFEMGSQVDAGVAYIHYQDAKRLMRQPSEAIDQLRLYLADPFSAPALA 239
Query: 242 ENIVRIL---GNGVVVIDWQQRYQIFFSCYE 269
+ IL G DW+ Y F +
Sbjct: 240 PKVQDILAKQGVKATTSDWRDTYGHLFGAVK 270
>gi|269102433|ref|ZP_06155130.1| lipoprotein releasing system transmembrane protein LolC
[Photobacterium damselae subsp. damselae CIP 102761]
gi|268162331|gb|EEZ40827.1| lipoprotein releasing system transmembrane protein LolC
[Photobacterium damselae subsp. damselae CIP 102761]
Length = 402
Score = 128 bits (320), Expect = 8e-28, Method: Composition-based stats.
Identities = 62/268 (23%), Positives = 113/268 (42%), Gaps = 7/268 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RYL + F S++S G+ IGVMAL+ V+SVMNGF + + R+L
Sbjct: 1 MFHPVSFFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMALVTVLSVMNGFEDQLKSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ VI +++ L + V KV+P G+ + S +G ++
Sbjct: 61 GVLPQAVITDASGRMLESDSAPAVLTQMDHVTKVVPITRGEVVIQSAQSISAGTMLGIDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
N + G + V+IG+ LA LG+ +GD+I ++
Sbjct: 121 NKYEV---IADHMVLGALDKLTPNSFNVVIGQALAVQLGVRVGDQIRLMVTSVSQYTPLG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D +VY ++Q+A + + + +SG +++ DP + +
Sbjct: 178 RIPSQRKFTVVGIYDTGSNVDEELVYTNIQDAGRLLHFKSDQMSGWRLYLDDPFVVTELE 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L N DW+ + F +
Sbjct: 238 ---QQPLPNHWQWTDWRAQRGELFQAVK 262
>gi|153000913|ref|YP_001366594.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Shewanella baltica OS185]
gi|151365531|gb|ABS08531.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella baltica OS185]
Length = 410
Score = 128 bits (320), Expect = 9e-28, Method: Composition-based stats.
Identities = 68/271 (25%), Positives = 116/271 (42%), Gaps = 5/271 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ F + +RY + + NAF S + + G+ +GV ALIVV SVMNG + +R+L
Sbjct: 1 MNPGFPFYIGYRYWRARKANAFASFITLFAVSGIFLGVAALIVVSSVMNGLEGQLKQRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G + + + PLVD+ A+ L +P V+ V P VS QA V +S + +
Sbjct: 61 GAVPQLTLYSEA-PLVDWTEQASALKALPGVLGVTPSVSTQAMVQSAASIRAVQVYGVFP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G VI+G +LAR L ++ GD + +LS G V
Sbjct: 120 ELAEKLSSVAQHTYSGAFEQLTSGDYKVILGSELARQLKVAPGDTVRLLSGDGVVYSPLG 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTH 241
+ S+ ++ D G+ Y+ Q+A+ + + + +++ DP +
Sbjct: 180 PVPSQRKFLVSGIFEMGSQVDAGVAYIHYQDAKRLMRQPSEAIDQLRLYLADPFSAPALA 239
Query: 242 ENIVRIL---GNGVVVIDWQQRYQIFFSCYE 269
+ IL G DW+ Y F +
Sbjct: 240 PKVQDILAKQGVKATTSDWRDTYGHLFGAVK 270
>gi|308050218|ref|YP_003913784.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Ferrimonas balearica DSM 9799]
gi|307632408|gb|ADN76710.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Ferrimonas balearica DSM 9799]
Length = 413
Score = 128 bits (320), Expect = 9e-28, Method: Composition-based stats.
Identities = 55/264 (20%), Positives = 108/264 (40%), Gaps = 2/264 (0%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
+ + WR+L + N F+S S S +GV +GV LI+V+S MNGF ++ R+L +
Sbjct: 7 PLALQIGWRFLRARNNNRFVSFISLSSVVGVALGVTVLILVLSAMNGFERELKDRLLAVV 66
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
H + P++D+ + + P V PFV + + + L + +
Sbjct: 67 PHAEMTAIDTPIIDWPAMVQSAEAEPGVAAAAPFVLIEGMLQKGDTMKPVALRGVLPKWE 126
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
++ D +++GK LA LG+ +GD+I++L P P +
Sbjct: 127 KDVSDAHRFMSDSAWNSLTDNQPNLVLGKALANQLGVEVGDRISLLLPRAGAGP--LAGY 184
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ + + D + + +L A + + VSG+ + + + NI
Sbjct: 185 RTRHLTITGLFDLGGEIDRTVAFTNLAAAAELAGMGDGVSGVRIRADNLFEAPQLIRNIG 244
Query: 246 RILGNGVVVIDWQQRYQIFFSCYE 269
+ + + DW + +S +
Sbjct: 245 FAQQHPLYLTDWTRTQGHLYSDIQ 268
>gi|217973130|ref|YP_002357881.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella baltica OS223]
gi|217498265|gb|ACK46458.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella baltica OS223]
Length = 410
Score = 128 bits (320), Expect = 9e-28, Method: Composition-based stats.
Identities = 68/271 (25%), Positives = 116/271 (42%), Gaps = 5/271 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ F + +RY + + NAF S + + G+ +GV ALIVV SVMNG + +R+L
Sbjct: 1 MNPGFPFYIGYRYWRARKANAFASFITLFAVSGIFLGVAALIVVSSVMNGLEGQLKQRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G + + + PLVD+ A+ L +P V+ V P VS QA V +S + +
Sbjct: 61 GAVPQLTLYSEA-PLVDWTEQASALKALPGVLGVTPSVSTQAMVQSAASIRAVQVYGVFP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G VI+G +LAR L ++ GD + +LS G V
Sbjct: 120 ELAEKLSSVAQHTYSGAFEQLTSGDYKVILGSELARQLKVAPGDTVRLLSGDGVVYSPLG 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTH 241
+ S+ ++ D G+ Y+ Q+A+ + + + +++ DP +
Sbjct: 180 PVPSQRKFLVSGVFEMGSQVDAGVAYIHYQDAKRLMRQPSEAIDQLRLYLADPFSAPALA 239
Query: 242 ENIVRIL---GNGVVVIDWQQRYQIFFSCYE 269
+ IL G DW+ Y F +
Sbjct: 240 PKVQDILAKQGVQATTSDWRDTYGHLFGAVK 270
>gi|84683511|ref|ZP_01011414.1| ABC lipoprotein efflux transporter, inner membrane subunit, LolE
[Maritimibacter alkaliphilus HTCC2654]
gi|84668254|gb|EAQ14721.1| ABC lipoprotein efflux transporter, inner membrane subunit, LolE
[Rhodobacterales bacterium HTCC2654]
Length = 415
Score = 128 bits (320), Expect = 9e-28, Method: Composition-based stats.
Identities = 81/269 (30%), Positives = 124/269 (46%), Gaps = 11/269 (4%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
++AWRYL + R +S ++IS IG+ + V ALI+ ++V GFR + + +LG N HV
Sbjct: 1 MIAWRYLRARRAEGGVSTMTWISLIGITLAVAALIITLAVRTGFRAEFVDTILGANAHVT 60
Query: 70 IQ---------QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ L DY A+R+ + V + P V GQ + +
Sbjct: 61 VYTAGEVTAQGNLDRTLKDYDAWADRIAGVEGVTRAAPLVKGQVMANNQDRNIGVQIFGI 120
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
++ + + +DF GV IG +AR LG+ +GDKI ++SP G T
Sbjct: 121 RADDLKTIPGIVNNETSTGNIDDF--QDGVAIGLGVARELGLGLGDKIRLISPNGVKTAF 178
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G R Y V +F D D VY+ +EAQ YFN E + IEV V+DP+ I +
Sbjct: 179 GTSPRVNVYDVKYIFSAGRYDIDATRVYLPFEEAQSYFNKEGSADEIEVMVEDPEEINRY 238
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ G+G +V W+ F E
Sbjct: 239 VGAVLAAAGDGSLVWTWEDSAGSFLRALE 267
>gi|332162082|ref|YP_004298659.1| outer membrane-specific lipoprotein transporter subunit LolC
[Yersinia enterocolitica subsp. palearctica 105.5R(r)]
gi|325666312|gb|ADZ42956.1| outer membrane-specific lipoprotein transporter subunit LolC
[Yersinia enterocolitica subsp. palearctica 105.5R(r)]
Length = 400
Score = 128 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 54/267 (20%), Positives = 104/267 (38%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMALI V+SVMNGF D+ +L
Sbjct: 1 MYQPVALFIGLRYMRGRASDRFGRFVSWLSTIGITLGVMALITVLSVMNGFERDLQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ +I L + A+ L + V V L S + +
Sbjct: 61 GMMPQALITTPQGSLDPNKIPASSLKSL---TGVTDIVPLTTADVVLQSARNLSAGVMLG 117
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++ + +I+G+ LA LG+ G+ + ++ P
Sbjct: 118 VDPNQHEPLADYLVNVHLKDLQPGSYNMILGEKLAGQLGVKRGETLRLMVPSASQFTPMG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + ++ Q+A ++G +F+ P +++
Sbjct: 178 RIPSQRLFNVIGTFAADSEVDGYQMLVNQQDASRLMRYPAGNITGWRLFLSQPLSVDSLS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G V DW++R F
Sbjct: 238 ---QQTLPEGTVWKDWRERKGELFQAV 261
>gi|269958415|ref|YP_003328202.1| lipoprotein releasing system, transmembrane protein [Anaplasma
centrale str. Israel]
gi|269848244|gb|ACZ48888.1| lipoprotein releasing system, transmembrane protein [Anaplasma
centrale str. Israel]
Length = 403
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 78/265 (29%), Positives = 127/265 (47%), Gaps = 10/265 (3%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
E ++A RYL SN S A+ +S +G+ IGV LI V SVMNGF ++ +LG+
Sbjct: 1 MSLEWLLARRYLQSNGGRFLFSTATALSILGICIGVATLISVTSVMNGFSAKLLSSILGM 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
NGHV + DY + + +P V+ P V GQA + + V+
Sbjct: 61 NGHVTVH---CNCPDYPDVIAGISIMPGVVSATPVVEGQAMLKYGRNIMGAVVRGMRMRD 117
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
L+ V + +G+++G LA ++G GD+I ++SP T G
Sbjct: 118 VRHKLRGHIV-----VGDVDMLEEGIVLGFRLAESIGADYGDEITVISPETSSTIFGAAP 172
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
R+++Y V G+F + +YD+ Y+ L+++QL F + V +EVF++D + I
Sbjct: 173 RTQTYRVTGIFDVGVYEYDSAFAYIPLRDSQLLFGYMDRVRYVEVFLRDVTQSSEALAAI 232
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
R G+ V DW+ + +F E
Sbjct: 233 ARR--TGLRVEDWKVQQGQYFRALE 255
>gi|319779403|ref|YP_004130316.1| Lipoprotein releasing system transmembrane protein LolC [Taylorella
equigenitalis MCE9]
gi|317109427|gb|ADU92173.1| Lipoprotein releasing system transmembrane protein LolC [Taylorella
equigenitalis MCE9]
Length = 425
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 63/278 (22%), Positives = 125/278 (44%), Gaps = 12/278 (4%)
Query: 3 IFSRFEVIVAWRYL-------FSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFRE 55
+ +E+ V RY +++ F+S + S G+ +GV ALI+V+SVM+GF+
Sbjct: 1 MSLPYELWVGTRYAGLTKSKGRGAKRDRFVSFVAASSMAGIALGVAALIIVLSVMSGFQV 60
Query: 56 DMIKRVLGINGHVVIQQKYYPLVD----YQFIANRLDFIPDVIKVLPFVSGQAFVSGLSS 111
+ R+L + H+ + V+ ++ + +++ DV PFVS +
Sbjct: 61 KVRDRMLSVIPHIQVYSTNTNAVEGLKGWEQLRDQIIKFKDVTGASPFVSAGGMLVRDQV 120
Query: 112 GGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL 171
+ + + + + G++ + G+++G A LG+ +GD + ++
Sbjct: 121 LRGAQFRGILPSEEGNVSELPEQITEGSLEQLKPKSFGIVLGSRAANLLGVGVGDTLLVM 180
Query: 172 SPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFV 231
SP G + P G R + TV+ +F +YD+ + +M + + F A+SG+ V V
Sbjct: 181 SPQGTINPSGFSPRMRQVTVVALFDSGHAEYDSNLAFMHADDVAVLFR-NTAISGVRVRV 239
Query: 232 KDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
KD + E + L G + DW + +F+ +
Sbjct: 240 KDMLKAPEIAELMTNTLPTGYIAHDWTYDNRTWFAAVK 277
>gi|300716253|ref|YP_003741056.1| ABC-type transport system, involved in lipoprotein release,
permease component [Erwinia billingiae Eb661]
gi|299062089|emb|CAX59205.1| ABC-type transport system, involved in lipoprotein release,
permease component [Erwinia billingiae Eb661]
Length = 399
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 51/267 (19%), Positives = 101/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GV+AL+ V+SVMNGF ++ K L
Sbjct: 1 MYQPVALFIGLRYMRGRASDRFGRFVSWLSAIGITLGVLALVTVLSVMNGFEHELEKSTL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ +I + Q A+ L L S S + +
Sbjct: 61 NLMPQALITSDKGSINPQQLPADSLKLQGTKK----ITPLTTGDVVLQSARSVGVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S ++ VIIG+ LA LG+ G+++ ++ P
Sbjct: 117 INPDEPDPLSPYLVNVKQTDLQPGKYNVIIGEQLATQLGVKRGEELRLMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ + + D + ++ Q+A ++G +++ P ++
Sbjct: 177 RLPSQRLFTVVGTFAANSEVDGYQILVNQQDASRLMRYPAGNITGWRLWLDKPLQVDSLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G+V DW++R F
Sbjct: 237 ---QQKLPEGLVWKDWRERKGELFQAV 260
>gi|40063595|gb|AAR38384.1| ABC transporter, permease protein [uncultured marine bacterium 582]
Length = 415
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 82/268 (30%), Positives = 122/268 (45%), Gaps = 11/268 (4%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
++AWRYL S R +S+ ++IS IG+ + V ALI +SV +GFR + + +LG N H
Sbjct: 1 MIAWRYLRSKRAEGGVSVMTWISLIGITLAVFALIATLSVRSGFRAEFVDTILGANAHAT 60
Query: 70 IQ---------QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ Q + +Y IA RL +P V +V P + GQ + L +
Sbjct: 61 VYQGATVNENGQMDRSISEYDTIAARLRQVPGVSRVAPLIKGQVMATRLGRNAGVEVFGI 120
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + + + Y GV IG +AR LG+ +GDKI ++SP G T
Sbjct: 121 SFENLLTLPRIARPESYAGDI--NRFQSGVAIGSGVARELGVIVGDKIKLMSPDGVKTAF 178
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G R KSY V +F D D +YM AQ +FN E EV V DP+A++
Sbjct: 179 GTSPRIKSYVVGYIFTAGRYDIDRTRIYMPFAAAQSFFNSEGTADEFEVMVADPEAVDVL 238
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ G+ +V W+Q F
Sbjct: 239 LPALQAAAGDNALVWTWRQASSSFLKAL 266
>gi|217973132|ref|YP_002357883.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella baltica OS223]
gi|217498267|gb|ACK46460.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella baltica OS223]
Length = 416
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 53/268 (19%), Positives = 105/268 (39%), Gaps = 1/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + WR+ + + N+FIS SF S G+ +GV LI+V+S MNGF ++ R+L
Sbjct: 1 MKGPLALSIGWRFYRARQSNSFISFISFASTAGIALGVAVLIIVLSAMNGFERELEHRLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ I P+ ++Q +A I + PF+ Q V +V
Sbjct: 61 GVVPQADIVGVSEPIANWQSVAEGALLIEGIRGAAPFIRMQGLVQKPGGFQGLAVVGIDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + + +++G+ L LG+ +GD + + D G
Sbjct: 121 KEEIKVSTLAQFMSDASWQSLGQDENHIVLGQSLLTKLGLEVGDTLALYVQDMDPEAAGS 180
Query: 183 GIRSKSYTVLGM-FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+KS+ + + + Y+ +Q A N+++ V+G+ + V
Sbjct: 181 LRAAKSHRFVVSGAYNLGGELELTTAYIPMQYAAQILNMKSGVTGVRISVDKVFDAPVKV 240
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ V + DW + + +
Sbjct: 241 RELGYAQKQSVYISDWTRTQGHLYQDIQ 268
>gi|126739184|ref|ZP_01754878.1| lipoprotein releasing system transmembrane protein LolE
[Roseobacter sp. SK209-2-6]
gi|126719801|gb|EBA16509.1| lipoprotein releasing system transmembrane protein LolE
[Roseobacter sp. SK209-2-6]
Length = 428
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 81/275 (29%), Positives = 128/275 (46%), Gaps = 11/275 (4%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+RFE ++AWRYL + R IS+ + IS +G+ + V ALI ++V +GFR + + +LG
Sbjct: 8 FARFEWMIAWRYLRARRAEGGISVMTVISLVGITLAVFALIATLAVRSGFRSEFVGTILG 67
Query: 64 INGHVVIQQKYYPLVDYQF---------IANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
N HV I QF +A R+ +P V + P + Q +
Sbjct: 68 ANAHVSIYAHGELNAAGQFERNLTDFDAMAERVAAVPGVTRAAPLIKRQVMANAGQRNAG 127
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ + ++ G++ + +GV IG +AR LG+++GDKI ++SP
Sbjct: 128 VQVFGISKTGVQTI--PGVAQSDGSIGDLDRFEEGVAIGSGVARELGVTVGDKIKLISPN 185
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G TP G R +Y V+ +F D D +YM EAQ YFN E IEV V++P
Sbjct: 186 GVKTPFGTSPRVSAYEVVYVFTAGRYDIDKTRLYMPFAEAQSYFNREGFADEIEVMVENP 245
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+A++ ++ V W+ F E
Sbjct: 246 EAVDLMVLPLLGAAEGAVGAWTWRDASGGFLRALE 280
>gi|322833631|ref|YP_004213658.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Rahnella sp. Y9602]
gi|321168832|gb|ADW74531.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Rahnella sp. Y9602]
Length = 400
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 52/267 (19%), Positives = 105/267 (39%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF +D+ +L
Sbjct: 1 MYQPVALFIGLRYMRGRASDRFGRFVSWLSTIGITLGVMALVTVLSVMNGFEKDLEGNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ +I L + ++ + V + V L S GS + +
Sbjct: 61 GLMPQALITTPGGSLDPQKITHQQVSALKSVNRA---VPLTTGDVVLQSPGSVAVGVMLG 117
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ VI+G LA+ L + GD++ ++
Sbjct: 118 VDPDQKDPLAKYLIGVAQQELQPGKYNVILGDQLAQQLKVRRGDQLRLMVTSVSQFTPVG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQE-AQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ S+ + + D + +++Q+ ++L + V+G +F+ P ++
Sbjct: 178 RVPSQRLFNVIGTFSANSEVDGYQMLVNIQDASRLMLYPKGNVTGWRLFLDKPLDVDSLS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L +G DW++R F
Sbjct: 238 ---TQKLPDGASWKDWRERRGELFQAV 261
>gi|157961373|ref|YP_001501407.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Shewanella pealeana ATCC 700345]
gi|157846373|gb|ABV86872.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella pealeana ATCC 700345]
Length = 417
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 64/269 (23%), Positives = 113/269 (42%), Gaps = 2/269 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + V WR+ F+ + N FIS SF S G+ +GV LIVV+S MNGF +++ +R+L
Sbjct: 1 MKALLAMWVGWRFYFARQSNRFISFISFASTAGIALGVAVLIVVLSAMNGFEKELEQRLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQA-FVSGLSSGGSGVLVRGI 121
G+ H + P+ +Q I + IP + PFV Q G VL +
Sbjct: 61 GVVSHGELIGVNEPIHQWQSIVEDANKIPGIAAAAPFVRMQGLVQKVGGFQGLTVLGVDV 120
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
F S +++GK LA++L + +G +++ P +
Sbjct: 121 DTEANVSNIKQFMSPESWQSLAQQGSNNIVLGKGLAKSLDLKVGQSLSLYMPNINNQSQN 180
Query: 182 MGIRSKSYTVLGM-FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+KS+ + + D Y+ +Q A L ++VSG+ + V D A +
Sbjct: 181 RIGAAKSHRFVVSGIFELGGELDMTTAYIPMQYAAKTLKLGDSVSGVRIKVDDVFAAPRL 240
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ V + DW + + +
Sbjct: 241 IRDLGYSQQQYVYISDWTRTQGHLYQDIQ 269
>gi|304408989|ref|ZP_07390610.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella baltica OS183]
gi|307302992|ref|ZP_07582747.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella baltica BA175]
gi|304352810|gb|EFM17207.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella baltica OS183]
gi|306913352|gb|EFN43774.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella baltica BA175]
Length = 416
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 53/268 (19%), Positives = 105/268 (39%), Gaps = 1/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + WR+ + + N+FIS SF S G+ +GV LI+V+S MNGF ++ R+L
Sbjct: 1 MKGPLALSIGWRFYRARQSNSFISFISFASTAGIALGVAVLIIVLSAMNGFERELEHRLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ I P+ ++Q +A I + PF+ Q V +V
Sbjct: 61 GVVPQADIVGVSEPIANWQNVAEGALLIEGIRGAAPFIRMQGLVQKPGGFQGLAVVGIDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + + +++G+ L LG+ +GD + + D G
Sbjct: 121 KEEIKVSTLAQFMSDASWQSLGQDENHIVLGQSLLTKLGLEVGDTLALYVQDMDPEAAGS 180
Query: 183 GIRSKSYTVLGM-FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+KS+ + + + Y+ +Q A N+++ V+G+ + V
Sbjct: 181 LRAAKSHRFVVSGAYNLGGELELTTAYIPMQYAAQILNMKSGVTGVRISVDKVFDAPVKV 240
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ V + DW + + +
Sbjct: 241 RELGYAQKQSVYISDWTRTQGHLYQDIQ 268
>gi|294141529|ref|YP_003557507.1| lipoprotein releasing system transmembrane protein LolE [Shewanella
violacea DSS12]
gi|293327998|dbj|BAJ02729.1| lipoprotein releasing system transmembrane protein LolE [Shewanella
violacea DSS12]
Length = 410
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 63/271 (23%), Positives = 115/271 (42%), Gaps = 5/271 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +RY + + N F S +F + G+++GV ALI+V SVMNG + +R+L
Sbjct: 1 MNLALSSHIGFRYWRARKANGFASFITFFAVSGILLGVAALIIVSSVMNGLEGQLKQRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G + + + P+ +Q L +P VI V P +S QA + S+ + +
Sbjct: 61 GAVPQLTVHSQA-PIEQWQSKIAELTKLPGVIGVTPSISNQAMIQSSSNISAIGVYGIYP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + L + F G+ +++G LAR LG+S GDK+ +LS G +
Sbjct: 120 DFEHNLLASMEHSFNGSFEQLEAGKYRIVLGSLLARRLGVSPGDKVRLLSGEGVIYSPLG 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFN-LENAVSGIEVFVKDPDAIEKTH 241
+ S+ V+ D + Y+ ++AQ V + ++ DP
Sbjct: 180 PVPSQRKFVVAGVFEMGSQVDANLAYIHYEDAQRLMRQKPGQVKNLRFYLDDPFNAANLS 239
Query: 242 ENIVRILGNG---VVVIDWQQRYQIFFSCYE 269
+++ V DW+ Y F +
Sbjct: 240 SDVIAEFSKDGLEVTTSDWRDSYGHLFGAVK 270
>gi|255264792|ref|ZP_05344134.1| lipoprotein releasing system transmembrane protein LolE
[Thalassiobium sp. R2A62]
gi|255107127|gb|EET49801.1| lipoprotein releasing system transmembrane protein LolE
[Thalassiobium sp. R2A62]
Length = 429
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 78/275 (28%), Positives = 130/275 (47%), Gaps = 11/275 (4%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+RFE ++AWRY+ + R +SI ++IS +G+ + V ALI ++V +GFR + + +LG
Sbjct: 9 FARFEWMIAWRYIRAKRAEGGVSIMTWISLVGITLAVFALIATLAVRSGFRAEFVDTILG 68
Query: 64 INGHVVIQQK---------YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
N HV + + + +Y +A + +P V +V P + GQ + LS+
Sbjct: 69 ANAHVTVYNRLEVSETGASSRTIANYDELAAAVAAVPGVTRVAPLIKGQVMANNLSNNVG 128
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ ++ + + GV IG +AR LG+++GD+I I+SP
Sbjct: 129 VEVFGITLDNLKTIPRIVQPEEARGNI--DRFYDGVAIGSGVARELGVTVGDRIKIISPN 186
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G T G R +Y V+ +F D D VY+ EAQ +FN +EV V+DP
Sbjct: 187 GVRTAFGTSPRVNAYEVVYVFTAGRYDIDRTRVYLPFSEAQNFFNRNGVADELEVMVEDP 246
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
D + ++ G+ ++ WQ F E
Sbjct: 247 DWVSDLTLPLLNAAGDRALIWTWQDASGGFLRALE 281
>gi|227015816|gb|ACP17913.1| putative lipoprotein releasing system transmembrane protein LolE
[Pseudomonas nitroreducens]
Length = 417
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 74/268 (27%), Positives = 126/268 (47%), Gaps = 2/268 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RY + R++ F+S S S IG+ +GV+ +IVV+SVMNGF +M RVL
Sbjct: 1 MFRPLSVYIGTRYTRAKRRSHFVSFISLTSMIGLALGVVVMIVVLSVMNGFDHEMRTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H ++ P+V++V PF+ Q +S + ++
Sbjct: 61 GMVPHATVESYQPIGDWRGIAGQIKQQHPNVLEVAPFIQMQGLLSAGGTVQKVLINAVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
N + G++ + G++IG A+NLG+ IGDK+ ++P VTP GM
Sbjct: 121 NEESKVSIIDQFFKEGSLQSLKAGEFGILIGDKAAKNLGVKIGDKVTFIAPEVSVTPAGM 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN-AVSGIEVFVKDPDAIEKTH 241
R K +TV+G F + + D + + + +A L++ V G+ + + D +T
Sbjct: 181 FPRMKRFTVVGTFHVGAGELDGYVAMVHIDDAARMRRLKDGQVEGLRLKLDDLFQAPRTA 240
Query: 242 ENIVRIL-GNGVVVIDWQQRYQIFFSCY 268
+I R L GN DW + + +
Sbjct: 241 WDIARTLKGNDYFARDWTRSHGNLYQAI 268
>gi|57238817|ref|YP_179953.1| lipoprotein releasing system transmembrane protein lolC [Ehrlichia
ruminantium str. Welgevonden]
gi|58578746|ref|YP_196958.1| lipoprotein releasing system transmembrane protein lolC [Ehrlichia
ruminantium str. Welgevonden]
gi|57160896|emb|CAH57801.1| putative lipoprotein releasing system transmembrane protein LolE
[Ehrlichia ruminantium str. Welgevonden]
gi|58417372|emb|CAI26576.1| Lipoprotein releasing system transmembrane protein lolC [Ehrlichia
ruminantium str. Welgevonden]
Length = 411
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 82/267 (30%), Positives = 130/267 (48%), Gaps = 4/267 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +FE+++A RYL SNR S+ + +SFIG+ +GV LI+VMSVMNGF E ++ ++
Sbjct: 1 MLFKFELMLALRYLQSNRSQFLCSMITMLSFIGITLGVATLIIVMSVMNGFGEKLLNCIV 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+NG V I +L + ++ ++ SG++VRGIS
Sbjct: 61 GVNGQVAIYFNNNEKDTNYHDVAKLIKDIPGVIDAIPITENQAMAKSEQSVSGIIVRGIS 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
D +D G++IG LA L ++ GDKI ILS T +G
Sbjct: 121 KQDLLRKNIIADNIVRGNISD--LDNGIVIGIKLAEILNVNYGDKITILSSDSIPTVIGS 178
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R KSY V+ +F + +YD+ +VYM L +QL F+ N V IEV + D + + +
Sbjct: 179 IPRMKSYKVIAVFDLGMYEYDSTLVYMPLHSSQLLFHYGNRVHNIEVSIDDINRSSEILK 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I + DW+ + +F+ +
Sbjct: 239 LIEDK--TSMKGEDWKMQQGSYFNALK 263
>gi|312971253|ref|ZP_07785431.1| lipo-releasing system transmembrane protein lolC [Escherichia coli
1827-70]
gi|310336455|gb|EFQ01641.1| lipo-releasing system transmembrane protein lolC [Escherichia coli
1827-70]
Length = 265
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 101/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q + L S S + +
Sbjct: 61 GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVA----PITTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ VI+G+ LA LG++ GD+I ++ P
Sbjct: 117 IDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + +++++A ++G +++ +P ++
Sbjct: 177 RIPSQRLFNVIGTFAANSEVDGNEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW+ R F
Sbjct: 237 ---QQKLPEGSKWQDWRDRKGELFQAV 260
>gi|73666711|ref|YP_302727.1| hypothetical protein Ecaj_0078 [Ehrlichia canis str. Jake]
gi|72393852|gb|AAZ68129.1| protein of unknown function DUF214 [Ehrlichia canis str. Jake]
Length = 410
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 78/267 (29%), Positives = 131/267 (49%), Gaps = 5/267 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +FE+++A RYL S+ S+ + +S +G+ +GV LI+VMSVMNGF E ++ V+
Sbjct: 1 MLLKFELMLALRYLQSSSSQFLCSMITILSLVGITLGVATLIIVMSVMNGFGEKLLDCVV 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+NGH+ I DY I + IP V +P QA + SS ++
Sbjct: 61 GLNGHIAIYCDGNFDYDYHEITKSIKEIPGVKYAVPITENQAMIKSSSSVSGVIVRGIEK 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G++ + G+ IG LA L + GDK+ I+S T +G
Sbjct: 121 QDIERNNIIVNNIVRGDI---AEFNDGIAIGIKLAEVLRVDYGDKLTIISSESLSTVIGN 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K+Y V+ +F + ++D+ +VYM L +QL+F+ +N V IEV + D + + +
Sbjct: 178 IPRMKTYKVVAIFDVGMYEFDSSLVYMPLHASQLFFHYDNRVKNIEVSIFDGNKSSEMLK 237
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I + + DW+ + +F E
Sbjct: 238 LIENKI--DMKGEDWKMQQGSYFHALE 262
>gi|237808984|ref|YP_002893424.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Tolumonas auensis DSM 9187]
gi|237501245|gb|ACQ93838.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Tolumonas auensis DSM 9187]
Length = 411
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 65/271 (23%), Positives = 104/271 (38%), Gaps = 6/271 (2%)
Query: 1 MS--IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMI 58
M IF + + RY + N F S S S G+ IGVMALIVV SVMNGF +
Sbjct: 1 MKSLIFQPISLAIGLRYAGARGDNRFASFISIFSTFGIAIGVMALIVVSSVMNGFEAQLK 60
Query: 59 KRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
R+LG+ H VI L ++Q + +P V PF++ + V S L
Sbjct: 61 DRILGVVPHGVITTASGQLPEWQQYQQIVTKLPHVQAAAPFITTEGMVQSPGSLAPIALQ 120
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
+ + + +I+G LA+ LG+ GDK+ +L G
Sbjct: 121 GVNPQNYPQQDLLRQTLGDTALERLVPGKFNIILGGALAQKLGVLPGDKVRVLVSEGSRF 180
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAI 237
+ S+ + D+ + + L +A+ V+G V++ D
Sbjct: 181 TPMGRVPSQRLFNVVALFDVGSPVDDQIALIHLDDARRLLRYPAENVTGWRVWLDDAFQT 240
Query: 238 EKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
E L + ++ DW++ F
Sbjct: 241 EDIA---QTSLPSSLIFQDWRKERGELFRAV 268
>gi|251770986|gb|EES51570.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Leptospirillum ferrodiazotrophum]
Length = 415
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 71/276 (25%), Positives = 125/276 (45%), Gaps = 10/276 (3%)
Query: 3 IFSRFEVIVAWRYLFSNRK-NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+ FE+ VA RYL S+R +S+ + IS GV +GV AL+ + VM GF+ + ++
Sbjct: 1 MTPFFELRVALRYLRSSRSDKRRLSLNTVISVAGVTVGVAALMATLGVMTGFQHKLRSKI 60
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
LG+N H+V+ + ++ + L + SG ++RG+
Sbjct: 61 LGVNSHIVLTDGRGSAIPDPAQIEKVVASIPGVTALSPFIVGQAMISADKTVSGTVIRGV 120
Query: 122 SNSDFSYLQNSFSRFYGNVSND--------FDRGKGVIIGKDLARNLGISIGDKINILSP 173
+ S + +D + GVI+G DLA LG+ +GDK++++SP
Sbjct: 121 DPAHESLVTRIDRYMVEGHLSDLSRDRTPKPEDLPGVILGSDLADRLGVDVGDKVDLISP 180
Query: 174 YGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVK 232
G + GM + + + V G+F+ +YDN + + + +A + L +V+G+E+ V
Sbjct: 181 TGTPSAFGMIPKIRHFQVAGIFKSGLYEYDNTLALLEIGQAARFLGLPQGSVTGLEIRVH 240
Query: 233 DPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
D A I + LG W + + FS
Sbjct: 241 DIFAATDMAHRIGKKLGFPYWARSWLEMNKNLFSAL 276
>gi|238758411|ref|ZP_04619588.1| Lipoprotein-releasing system transmembrane protein lolC [Yersinia
aldovae ATCC 35236]
gi|238703315|gb|EEP95855.1| Lipoprotein-releasing system transmembrane protein lolC [Yersinia
aldovae ATCC 35236]
Length = 400
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 56/267 (20%), Positives = 104/267 (38%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMALI V+SVMNGF D+ +L
Sbjct: 1 MYQPVALFIGLRYMRGRASDRFGRFVSWLSTIGITLGVMALITVLSVMNGFERDLQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ +I L + A+ L + V V L S + +
Sbjct: 61 GLMPQALITTPQGSLDPNKIPASALKSL---RGVTDIVPLTTADVVLQSARNLAAGVMLG 117
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S + + ++ + +I+G+ LA LG+ G+ + ++ P
Sbjct: 118 VSPDQHEPLADYLVNVHLKDLQPGSYNMILGEKLAAQLGVKRGETLRLMVPSASQFTPMG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + ++ Q+A +SG +F+ P +++
Sbjct: 178 RIPSQRLFTIIGTFAADSEVDGYQMLVNQQDASRLMRYPPGNISGWRLFLDQPLSVDSLS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G V DW+ R F
Sbjct: 238 ---QQTLPEGTVWKDWRDRKGELFQAV 261
>gi|294141527|ref|YP_003557505.1| lipoprotein releasing system transmembrane protein LolC [Shewanella
violacea DSS12]
gi|293327996|dbj|BAJ02727.1| lipoprotein releasing system transmembrane protein LolC, putative
[Shewanella violacea DSS12]
Length = 310
Score = 127 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 61/271 (22%), Positives = 111/271 (40%), Gaps = 4/271 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + V WR+ + + N+FIS SF S G+ +GV LIVV+S MNGF ++ R+L
Sbjct: 1 MNRLLSLWVGWRFYLARQSNSFISFISFASTAGIALGVAVLIVVLSAMNGFERELENRLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H + P+ +Q IAN D IP ++ PF+ Q V ++ +
Sbjct: 61 GVVAHGELTGVNEPIAHWQKIANDADKIPGILASAPFIQLQGLVQKPGGFQGLNVLGIDT 120
Query: 123 -NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSP---YGDVT 178
+ F + +++GK LA NLG+S+GD +++ P +
Sbjct: 121 EQEQKVSVIADFMSEETWLKLGRGDENNIVLGKGLADNLGLSVGDSLSLYMPDVSHQSQD 180
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+G V+ + D Y+ ++ A + VSG+ + V+
Sbjct: 181 SKRIGSAKSHRFVVAGVFELGGELDLTTAYIPMKYAASILGMGQGVSGVRIKVEQVFDAP 240
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + + DW + + +
Sbjct: 241 RLIRELGYSQDQYLYISDWTRTQGNLYQDIQ 271
>gi|318606130|emb|CBY27628.1| lipoprotein releasing system transmembrane protein LolC [Yersinia
enterocolitica subsp. palearctica Y11]
Length = 400
Score = 127 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 54/267 (20%), Positives = 104/267 (38%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMALI V+SVMNGF D+ +L
Sbjct: 1 MYQPVALFIGLRYMRGRASDRFGRFVSWLSTIGITLGVMALITVLSVMNGFERDLQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ +I L + A+ L + V V L S + +
Sbjct: 61 GMMPQALITTPQGSLDPNKIPASSLKSL---TGVTDIVPLTTADVVLQSARNLSAGVMLG 117
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++ + +I+G+ LA LG+ G+ + ++ P
Sbjct: 118 VDPNQHEPLADYLVNVHLKDLQPGSYNMILGEKLAGQLGVKRGETLRLMVPSASQFTPMG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + ++ Q+A ++G +F+ P +++
Sbjct: 178 RIPSQRLFNVIGTFAADSEVDGYQMLVNQQDASRLMRYPAGNITGWRLFLSQPLSVDSLS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G V DW++R F
Sbjct: 238 ---QQTLPEGTVWKDWRERKGELFQAV 261
>gi|58616806|ref|YP_196005.1| lipoprotein releasing system transmembrane protein lolC [Ehrlichia
ruminantium str. Gardel]
gi|58416418|emb|CAI27531.1| Lipoprotein releasing system transmembrane protein lolC [Ehrlichia
ruminantium str. Gardel]
Length = 411
Score = 127 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 82/267 (30%), Positives = 131/267 (49%), Gaps = 4/267 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +FE+++A RYL SNR S+ + +SFIG+ +GV LI+VMSVMNGF E ++ ++
Sbjct: 1 MLFKFELMLALRYLQSNRSQFLCSMITMLSFIGITLGVATLIIVMSVMNGFGEKLLNCIV 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+NG V I +L + ++ ++ SG++VRGIS
Sbjct: 61 GVNGQVAIYFNNNEKDTNYHDVAKLIKDIPGVIDAIPITENQAMAKSEQSVSGIIVRGIS 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
D +D G++IG LA L ++ GDKI ILS T +G
Sbjct: 121 KQDLLRKNIIADNIVRGNISD--LDNGIVIGIKLAEILNVNYGDKITILSSDSIPTVIGS 178
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R KSY V+ +F + +YD+ +VYM L +QL+F+ N V IEV + D + + +
Sbjct: 179 IPRMKSYKVIAVFDLGMYEYDSTLVYMPLHSSQLFFHYGNRVHNIEVSIDDINRSSEILK 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I + DW+ + +F+ +
Sbjct: 239 LIEDK--TSMKGEDWKMQQGSYFNALK 263
>gi|225851267|ref|YP_002731501.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Persephonella marina EX-H1]
gi|225646531|gb|ACO04717.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Persephonella marina EX-H1]
Length = 404
Score = 127 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 66/265 (24%), Positives = 122/265 (46%), Gaps = 1/265 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ +A RYL S + +S + IS +G+++GV AL++ ++VM+GF + K++L
Sbjct: 1 MPLYIRIAIRYLMSLK-TKALSFMTVISLLGIVVGVAALLITLAVMSGFLWGIKKKILET 59
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ H+VI + +Y+ + I ++ S V VRG+
Sbjct: 60 SPHIVIFKISGNFTEYREFPEKYLKGISEIVDYQPFVYSQALASKDSTVISVTVRGVPPE 119
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + + + VIIGKD+A L + IGD I + SP+G TP+G
Sbjct: 120 KDRRILGIDKKIIAGSYDSIKDDRNVIIGKDVALALNVWIGDSITLTSPFGRKTPLGYIP 179
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ K V G+ +YD+ + M+L+ AQ +F+++++V+GI++ + DP +
Sbjct: 180 KVKKVYVGGIIDFGMYEYDSTYIGMNLESAQRFFDMKDSVTGIQLKIDDPYKAALVKSKL 239
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ +V W + F E
Sbjct: 240 EEKIHFPYLVRSWMDLNKSLFQALE 264
>gi|114569926|ref|YP_756606.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Maricaulis maris MCS10]
gi|114340388|gb|ABI65668.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Maricaulis maris MCS10]
Length = 443
Score = 127 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 69/277 (24%), Positives = 124/277 (44%), Gaps = 11/277 (3%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS +E ++A+RYL S RK+ +++ ++ISF G+ + V LI VMS+MNGFR ++ ++LG
Sbjct: 19 FSPYEFLLAFRYLRSRRKHGGVALIAWISFGGIALAVTGLIAVMSIMNGFRAELFSQLLG 78
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV------- 116
HV + + P D + ++ + V P +SGQ +
Sbjct: 79 FQPHVYVDTREMPADDVDRLLLEIEAMTGVTSADPVISGQVMATSDRYETFLQVLAVRPQ 138
Query: 117 ----LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILS 172
+ S D + G +++G +AR LG+++GD++ LS
Sbjct: 139 DLAEMDVIRSGEDPRSRTGLTHGDLSEFGTGRNGGDVIVLGTGVARRLGVNVGDRVTFLS 198
Query: 173 PYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK 232
+ G + K+Y V + D+ + YM L++ QL+F + V I+V +
Sbjct: 199 ARAAPSAFGARPQQKAYYVGAILAAGVSTIDDSLAYMPLEQGQLFFVRGDDVDLIQVRLD 258
Query: 233 DPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
D + + + I G V D+ + FF+ +
Sbjct: 259 DAEQAPLYVDPVRAIAGPNAAVYDYTRLDPAFFNALQ 295
>gi|325281253|ref|YP_004253795.1| hypothetical protein Odosp_2635 [Odoribacter splanchnicus DSM
20712]
gi|324313062|gb|ADY33615.1| protein of unknown function DUF214 [Odoribacter splanchnicus DSM
20712]
Length = 400
Score = 127 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 48/267 (17%), Positives = 98/267 (36%), Gaps = 3/267 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ + +A RYLFS +K I+I S IS +GV IG AL++++SV NG + K
Sbjct: 1 MKLSLFIAKRYLFSKKKQNAINIISVISVVGVAIGTSALVIILSVFNGIDLLLQKSADSF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+VI + + + + + + S V ++G+++
Sbjct: 61 TPDLVISPLTGKFSHFDDSLYQALRNNSSVAYYNQIVEEKALVKYDDKLSPVTIKGVADD 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARN--LGISIGDKINILSPYGDVTPMGM 182
+ G ++G LA +G++ + P +
Sbjct: 121 YARNTHFEDNIIQGTFQLKTGDTYKSVVGYGLAAELGIGLNFLTPMVFYYPDKNAGVSAS 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + F + + V L+ AQ F + + +S IE+ +KD I + +
Sbjct: 181 ALNTAYLYPS-AFFSSQQEIEGQYVLTDLEFAQRLFGINDQISKIEIKLKDSKLIPEVKK 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + D + + F++ +
Sbjct: 240 ELSDFTDTTYRLEDKYELNKAFYAMMK 266
>gi|323175272|gb|EFZ60885.1| lipoprotein-releasing system transmembrane protein lolC
[Escherichia coli LT-68]
Length = 265
Score = 127 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 101/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q + L S S + +
Sbjct: 61 GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVA----PITTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ VI+G+ LA LG++ GD+I ++ P
Sbjct: 117 IDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRMMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + +++++A ++G +++ +P ++
Sbjct: 177 RIPSQRLFNVIGTFAANSEVDGNEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW+ R F
Sbjct: 237 ---QQKLPEGSKWQDWRDRKGELFQAV 260
>gi|51596764|ref|YP_070955.1| outer membrane-specific lipoprotein transporter subunit LolC
[Yersinia pseudotuberculosis IP 32953]
gi|153950693|ref|YP_001400577.1| outer membrane-specific lipoprotein transporter subunit LolC
[Yersinia pseudotuberculosis IP 31758]
gi|170023948|ref|YP_001720453.1| outer membrane-specific lipoprotein transporter subunit LolC
[Yersinia pseudotuberculosis YPIII]
gi|186895832|ref|YP_001872944.1| outer membrane-specific lipoprotein transporter subunit LolC
[Yersinia pseudotuberculosis PB1/+]
gi|51590046|emb|CAH21680.1| ABC transporter/lipoprotein releasing system, permease subunit lolC
[Yersinia pseudotuberculosis IP 32953]
gi|152962188|gb|ABS49649.1| lipoprotein-releasing system, transmembrane protein lolC [Yersinia
pseudotuberculosis IP 31758]
gi|169750482|gb|ACA68000.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Yersinia pseudotuberculosis YPIII]
gi|186698858|gb|ACC89487.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Yersinia pseudotuberculosis PB1/+]
Length = 400
Score = 127 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 102/267 (38%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMALI V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRASDRFGRFVSWLSTIGITLGVMALITVLSVMNGFERNLQDTIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ +I L + A+ L + V V L S + +
Sbjct: 61 GLMPQALITTPQGSLDPNKIPASTLKSLSG---VSDIVPLTTADVVLQSARNLAAGVMLG 117
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++ +I+G+ LA LG+ G+ + ++ P
Sbjct: 118 VDPQQHEPLANYLVNVDIKALAPGSYNIILGEKLAGQLGVKRGETLRLMVPSASQFTPMG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + ++ Q+A ++G +F+ P +++
Sbjct: 178 RIPSQRVFNIIGTFAANSEVDGYQILVNQQDASRLMRYPLGNITGWRLFLSQPLSVDSLS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G V DW+ R F
Sbjct: 238 ---QQSLPEGTVWKDWRDRKGELFQAV 261
>gi|22125679|ref|NP_669102.1| outer membrane-specific lipoprotein transporter subunit LolC
[Yersinia pestis KIM 10]
gi|108812168|ref|YP_647935.1| outer membrane-specific lipoprotein transporter subunit LolC
[Yersinia pestis Nepal516]
gi|145599105|ref|YP_001163181.1| outer membrane-specific lipoprotein transporter subunit LolC
[Yersinia pestis Pestoides F]
gi|149366409|ref|ZP_01888443.1| lipoprotein releasing system, transmembrane protein [Yersinia
pestis CA88-4125]
gi|162418113|ref|YP_001607244.1| outer membrane-specific lipoprotein transporter subunit LolC
[Yersinia pestis Angola]
gi|165925577|ref|ZP_02221409.1| lipoprotein-releasing system, transmembrane protein lolC [Yersinia
pestis biovar Orientalis str. F1991016]
gi|166008507|ref|ZP_02229405.1| lipoprotein-releasing system, transmembrane protein lolC [Yersinia
pestis biovar Antiqua str. E1979001]
gi|166211100|ref|ZP_02237135.1| lipoprotein-releasing system, transmembrane protein lolC [Yersinia
pestis biovar Antiqua str. B42003004]
gi|167421888|ref|ZP_02313641.1| lipoprotein-releasing system, transmembrane protein lolC [Yersinia
pestis biovar Orientalis str. MG05-1020]
gi|167426324|ref|ZP_02318077.1| lipoprotein-releasing system, transmembrane protein lolC [Yersinia
pestis biovar Mediaevalis str. K1973002]
gi|218928762|ref|YP_002346637.1| outer membrane-specific lipoprotein transporter subunit LolC
[Yersinia pestis CO92]
gi|229841612|ref|ZP_04461770.1| outer membrane-specific lipoprotein transporter subunit; membrane
component of ABC superfamily [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229843729|ref|ZP_04463872.1| outer membrane-specific lipoprotein transporter subunit; membrane
component of ABC superfamily [Yersinia pestis biovar
Orientalis str. India 195]
gi|229902489|ref|ZP_04517608.1| outer membrane-specific lipoprotein transporter subunit; membrane
component of ABC superfamily [Yersinia pestis Nepal516]
gi|270490332|ref|ZP_06207406.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Yersinia pestis KIM D27]
gi|294504176|ref|YP_003568238.1| lipoprotein releasing system, transmembrane protein [Yersinia
pestis Z176003]
gi|21958593|gb|AAM85353.1|AE013781_4 hypothetical protein y1785 [Yersinia pestis KIM 10]
gi|108775816|gb|ABG18335.1| lipoprotein releasing system, transmembrane protein [Yersinia
pestis Nepal516]
gi|115347373|emb|CAL20271.1| lipoprotein releasing system, transmembrane protein [Yersinia
pestis CO92]
gi|145210801|gb|ABP40208.1| lipoprotein releasing system, transmembrane protein [Yersinia
pestis Pestoides F]
gi|149290783|gb|EDM40858.1| lipoprotein releasing system, transmembrane protein [Yersinia
pestis CA88-4125]
gi|162350928|gb|ABX84876.1| lipoprotein-releasing system, transmembrane protein lolC [Yersinia
pestis Angola]
gi|165922686|gb|EDR39837.1| lipoprotein-releasing system, transmembrane protein lolC [Yersinia
pestis biovar Orientalis str. F1991016]
gi|165992889|gb|EDR45190.1| lipoprotein-releasing system, transmembrane protein lolC [Yersinia
pestis biovar Antiqua str. E1979001]
gi|166208280|gb|EDR52760.1| lipoprotein-releasing system, transmembrane protein lolC [Yersinia
pestis biovar Antiqua str. B42003004]
gi|166960373|gb|EDR56394.1| lipoprotein-releasing system, transmembrane protein lolC [Yersinia
pestis biovar Orientalis str. MG05-1020]
gi|167054679|gb|EDR64483.1| lipoprotein-releasing system, transmembrane protein lolC [Yersinia
pestis biovar Mediaevalis str. K1973002]
gi|229680535|gb|EEO76632.1| outer membrane-specific lipoprotein transporter subunit; membrane
component of ABC superfamily [Yersinia pestis Nepal516]
gi|229689337|gb|EEO81400.1| outer membrane-specific lipoprotein transporter subunit; membrane
component of ABC superfamily [Yersinia pestis biovar
Orientalis str. India 195]
gi|229694075|gb|EEO84123.1| outer membrane-specific lipoprotein transporter subunit; membrane
component of ABC superfamily [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|262362293|gb|ACY59014.1| lipoprotein releasing system, transmembrane protein [Yersinia
pestis D106004]
gi|262366228|gb|ACY62785.1| lipoprotein releasing system, transmembrane protein [Yersinia
pestis D182038]
gi|270338836|gb|EFA49613.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Yersinia pestis KIM D27]
gi|294354635|gb|ADE64976.1| lipoprotein releasing system, transmembrane protein [Yersinia
pestis Z176003]
gi|320014767|gb|ADV98338.1| outer membrane-specific lipoprotein transporter subunit; membrane
component of ABC superfamily [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 400
Score = 127 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 102/267 (38%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMALI V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRASDRFGRFVSWLSTIGITLGVMALITVLSVMNGFERNLQDTIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ +I L + A+ L + V V L S + +
Sbjct: 61 GLMPQALITTPQGSLDPNKIPASTLKSLSG---VSDIVPLTTADVVLQSARNLAAGVMLG 117
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++ +I+G+ LA LG+ G+ + ++ P
Sbjct: 118 VDPQQHEPLANYLVNVDIKALAPGSYNIILGEKLAGQLGVKRGETLRLMVPSASQFTPMG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + ++ Q+A ++G +F+ P +++
Sbjct: 178 RIPSQRVFNIIGTFAANSEVDGYQILVNQQDASRLMRYPLGNITGWRLFLSQPLSVDSLS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G V DW+ R F
Sbjct: 238 ---QQSLPEGTVWKDWRDRKGELFQAV 261
>gi|238783788|ref|ZP_04627807.1| Lipoprotein-releasing system transmembrane protein lolC [Yersinia
bercovieri ATCC 43970]
gi|238715339|gb|EEQ07332.1| Lipoprotein-releasing system transmembrane protein lolC [Yersinia
bercovieri ATCC 43970]
Length = 400
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 54/267 (20%), Positives = 102/267 (38%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMALI V+SVMNGF + +L
Sbjct: 1 MYQPVALFIGLRYMRGRASDRFGRFVSWLSTIGITLGVMALITVLSVMNGFERGLQDNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ +I L Q A+ L + V V L S + +
Sbjct: 61 GLMPQALITTPQGSLDPKQMPASALKSL---TGVTDIVPLTTADVVLQSARNLSAGVMLG 117
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + + +I+G+ LA LG+ G+ + ++ P
Sbjct: 118 VDPSQHEPLASYLVNVQLKDLQPGSYNMILGEKLAGQLGVKRGETLRLMVPSASQFTPMG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + ++ Q+A ++G +F+ P +++
Sbjct: 178 RIPSQRLFNVIGTFAADSEVDGYQMLVNQQDASRLMRYPAGNITGWRLFLSQPLSVDSLS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G+V DW+ R F
Sbjct: 238 ---QQTLPEGMVWKDWRDRKGELFQAV 261
>gi|123442013|ref|YP_001005996.1| outer membrane-specific lipoprotein transporter subunit LolC
[Yersinia enterocolitica subsp. enterocolitica 8081]
gi|122088974|emb|CAL11785.1| lipoprotein releasing system, transmembrane protein [Yersinia
enterocolitica subsp. enterocolitica 8081]
Length = 400
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 54/267 (20%), Positives = 104/267 (38%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMALI V+SVMNGF D+ +L
Sbjct: 1 MYQPVALFIGLRYMRGRASDRFGRFVSWLSTIGITLGVMALITVLSVMNGFERDLQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ +I L + A+ L + V V L S + +
Sbjct: 61 GMMPQALITTPQGSLDPNKIPASSLKSL---TGVTDIVPLTTADVVLQSARNLSAGVMLG 117
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++ + +I+G+ LA LG+ G+ + ++ P
Sbjct: 118 VDPNQHEPLADYLVNVHLKDLQPGSYNMILGEKLAGQLGVKRGETLRLMVPSASQFTPMG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + ++ Q+A ++G +F+ P +++
Sbjct: 178 RIPSQRLFNVIGTFAADSEVDGYQMLVNQQDASRLMRYPAGNITGWRLFLSQPLSVDSLS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G V DW++R F
Sbjct: 238 ---QQTLPEGTVWKDWRERKGELFQAV 261
>gi|37526704|ref|NP_930048.1| outer membrane-specific lipoprotein transporter subunit LolC
[Photorhabdus luminescens subsp. laumondii TTO1]
gi|36786136|emb|CAE15188.1| Lipoprotein releasing system transmembrane protein lolC
[Photorhabdus luminescens subsp. laumondii TTO1]
Length = 400
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 57/267 (21%), Positives = 109/267 (40%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY+ + F S++S IG+ +GV ALI V+SVMNGF + +L
Sbjct: 1 MFQSVSLFIGLRYMRGRAADKFGRFVSWLSTIGITLGVAALITVLSVMNGFERSLETSIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ V+ L A+ L + V ++ P V G + + G GV++
Sbjct: 61 GLMPQAVVTSVNGSLDPKAHPASELAALKQVDRMTPLVMGDVVLQSARNVGVGVMLGIAF 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + I+G+ LA LG+ GD+I ++ P
Sbjct: 121 DEYE---PLTEYLTGAYRHQLEPGSYNAILGEKLAGELGVKRGDRIRLMVPGASQLTPMG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + ++ Q+A ++G +++ +P A++
Sbjct: 178 RIPSQRLFTVIGTFASNSEVDGTQILVNQQDAARLMRYPPGHITGWRLYLSEPLAVDSLS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
++ + G++ DW++R FF
Sbjct: 238 ---LQTMPEGLLWKDWRERKGEFFQAV 261
>gi|163733472|ref|ZP_02140915.1| lipoprotein releasing system transmembrane protein, putative
[Roseobacter litoralis Och 149]
gi|161393260|gb|EDQ17586.1| lipoprotein releasing system transmembrane protein, putative
[Roseobacter litoralis Och 149]
Length = 415
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 75/269 (27%), Positives = 122/269 (45%), Gaps = 11/269 (4%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
++AWRYL + R +S+ ++IS IG+ + V ALI +SV +GFR + + +LG N HV
Sbjct: 1 MIAWRYLRARRSEGGVSVMTWISLIGITLAVFALIATLSVRSGFRAEFVDTILGANAHVT 60
Query: 70 IQ---------QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
I Q + D+ IA + +P V +V P + GQ + +
Sbjct: 61 IYALGSVTENGQMDRTMTDFDAIAAQAATVPGVTRVAPLIRGQVMAAHQGRNAGVEVFGV 120
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ S + + +G+ +G +AR LG+ IGD+I ++SP G T
Sbjct: 121 APENLRSLPRIADPATSRGDI--ARFDEGIALGSGVARELGVGIGDRIRLISPDGVKTAF 178
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G R +Y V +F D D Y+ +AQ +FN E IEV V++P+ +E
Sbjct: 179 GTSPRVNAYEVTYIFTAGRYDIDRTRAYLPFSDAQTFFNREGVADEIEVMVQEPERLETV 238
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
++++ G + WQ F E
Sbjct: 239 RMDLLKAAGERGQIWTWQDASGGFLRALE 267
>gi|238795992|ref|ZP_04639504.1| Lipoprotein-releasing system transmembrane protein lolC [Yersinia
mollaretii ATCC 43969]
gi|238720197|gb|EEQ12001.1| Lipoprotein-releasing system transmembrane protein lolC [Yersinia
mollaretii ATCC 43969]
Length = 400
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 54/267 (20%), Positives = 103/267 (38%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMALI V+SVMNGF D+ +L
Sbjct: 1 MYQPVALFIGLRYMRGRASDRFGRFVSWLSTIGITLGVMALITVLSVMNGFERDLQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ +I L + A+ L + V V L S + +
Sbjct: 61 GLMPQALITTPQGSLDPNKIPASALKSL---TGVTDIVPLTTADVVLQSARNLSAGVMLG 117
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++ + +I+G+ LA LG+ G+ + ++ P
Sbjct: 118 VDPTQHEPLADYLVNVHLKDLQPGSYNMILGEKLAGQLGVKRGETLRLMVPSASQFTPMG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + ++ Q+A ++G +F+ P +++
Sbjct: 178 RIPSQRLFNVIGTFAANSEVDGYQMLVNQQDASRLMRYPAGNITGWRLFLSQPLSVDSLS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G V DW+ R F
Sbjct: 238 ---QQTLPEGTVWKDWRDRKGELFQAV 261
>gi|254440668|ref|ZP_05054161.1| efflux ABC transporter, permease protein [Octadecabacter
antarcticus 307]
gi|198250746|gb|EDY75061.1| efflux ABC transporter, permease protein [Octadecabacter
antarcticus 307]
Length = 438
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 77/284 (27%), Positives = 134/284 (47%), Gaps = 21/284 (7%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FSRFE ++AWRY+ + R +SI ++IS IGV + V ALI V++V +GFR D + ++G
Sbjct: 8 FSRFEWMIAWRYIRAKRAEGGVSIMTWISLIGVTLAVFALIAVLAVRSGFRADFVDTIVG 67
Query: 64 INGHVVIQQKY-------------------YPLVDYQFIANRLDFIPDVIKVLPFVSGQA 104
N H+ ++Q + + + +A +L I V + P + G+
Sbjct: 68 ANAHLTVRQNFTETVTVTQGDQSVDVTRRVDTIANGDALAAQLREIDGVTRAAPIIRGEG 127
Query: 105 FVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISI 164
+ + + + + +DF G GV +G +A NLG+S+
Sbjct: 128 LATVGAQSSFVQVYGITPDDLRDIPLVLNPQRASGSIDDF--GDGVALGSGVANNLGVSV 185
Query: 165 GDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAV 224
GD+IN+LS G T G R ++ V+ +F+ D VY+ L++AQ +++ +
Sbjct: 186 GDRINLLSAEGVNTAAGRSPRRNTFDVVYIFQTGRYITDISRVYLPLEQAQTFYSRDGVH 245
Query: 225 SGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
IE++V DPD +E+ + R LG + W+ +
Sbjct: 246 DEIEIYVADPDRVEEWISPLYRELGPEAFLYSWKDNEGAYLRAL 289
>gi|260575890|ref|ZP_05843885.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Rhodobacter sp. SW2]
gi|259021816|gb|EEW25117.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Rhodobacter sp. SW2]
Length = 469
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 77/274 (28%), Positives = 123/274 (44%), Gaps = 11/274 (4%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE ++AWRYL + R +S+ ++IS +G+ + V ALI +SV GFR + + +LG
Sbjct: 49 FAGFEWMIAWRYLRARRAEGGVSVMTWISLVGITLAVFALIATLSVRAGFRAEFVDTILG 108
Query: 64 INGHVVIQ---------QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
N HV + D+ +A R+ IP V + P + GQ +
Sbjct: 109 ANAHVTVYSAARVDDAGVTQRGFADFDAVAARVREIPGVTRAAPIIKGQVMATANGVNLG 168
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ + + + + G+ IG +AR LG+ +GDK+ ++SP
Sbjct: 169 VEVYGMRLEDVKTIPRVGIGADAYG--DLGNYDHGIAIGSGIARELGLMVGDKLRLISPN 226
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G T G R +Y V+ +F D D +YM L EAQ YFN E IEV + DP
Sbjct: 227 GVKTAFGTSPRVNAYEVVYVFTAGRYDIDRTRIYMPLAEAQSYFNREGMADEIEVMLTDP 286
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+A + ++ G G ++ W+ F
Sbjct: 287 EAADSYAPALMAAGGAGALLWTWRDSAGSFLRAL 320
>gi|238791841|ref|ZP_04635478.1| Lipoprotein-releasing system transmembrane protein lolC [Yersinia
intermedia ATCC 29909]
gi|238728945|gb|EEQ20462.1| Lipoprotein-releasing system transmembrane protein lolC [Yersinia
intermedia ATCC 29909]
Length = 400
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 54/267 (20%), Positives = 103/267 (38%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMALI V+SVMNGF D+ +L
Sbjct: 1 MYQPVALFIGLRYMRGRASDRFGRFVSWLSTIGITLGVMALITVLSVMNGFERDLQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ +I L + A+ L + V V L S + +
Sbjct: 61 GLMPQALITTPQGSLDPNKIPASALKSL---AGVTDIVPLTTADVVLQSARNLAAGVMLG 117
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++ + I+G+ LA LG+ G+ + ++ P
Sbjct: 118 VDPERHEPLADYLVNVHLKDLQPGSYNTILGEKLAGQLGVKRGETLRLMVPSASQFTPMG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + ++ Q+A ++G +F+ P +++
Sbjct: 178 RIPSQRLFNIIGTFAADSEVDGYQMLVNQQDASRLMRYPAGNITGWRLFLSQPLSVDSLS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G V DW++R F
Sbjct: 238 ---QQALPEGTVWKDWRERKGELFQAV 261
>gi|300723615|ref|YP_003712920.1| outer membrane lipoprotein ABC transporter membrane protein
[Xenorhabdus nematophila ATCC 19061]
gi|297630137|emb|CBJ90774.1| transport protein of outer membrane lipoproteins (ABC superfamily,
membrane) [Xenorhabdus nematophila ATCC 19061]
Length = 400
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 59/267 (22%), Positives = 115/267 (43%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY+ + F S++S IG+ +GV ALI V+SVMNGF + +L
Sbjct: 1 MFQSVSLFIGLRYMRGRAVDKFGRFVSWLSAIGITLGVAALITVLSVMNGFERTLEGSIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G +I + + + + +L + V ++ V G + S+ G GV++ +
Sbjct: 61 GFMPQAIITSEKGSINPEEHPSEQLSGLKGVNRITSLVQGDVVLQSPSNVGVGVMLGITN 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + S VI+G+ LA LG+ GD+I ++ P
Sbjct: 121 DEYA---PLAKHIVDVDRSQLQPGRYFVILGEKLAAKLGVKRGDQIRVIVPSASQLTPMG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + ++ Q+A ++G +++ +P +++
Sbjct: 178 RIPSQRLFTVAGTFFANSEVDGTEILVNQQDAARLLRYPIGNITGWRLYLNEPLSVDVLS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
++ L NG+V DW++R FF
Sbjct: 238 ---LQPLPNGLVWKDWRERKGEFFQAV 261
>gi|149201763|ref|ZP_01878737.1| lipoprotein releasing system transmembrane protein LolE
[Roseovarius sp. TM1035]
gi|149144811|gb|EDM32840.1| lipoprotein releasing system transmembrane protein LolE
[Roseovarius sp. TM1035]
Length = 428
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 76/275 (27%), Positives = 129/275 (46%), Gaps = 11/275 (4%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ FE ++AWRYL + R +S+ ++IS IG+ + V ALI ++V +GFR + + +LG
Sbjct: 8 FAAFEWLIAWRYLRAKRAEGGVSVMTWISLIGITLAVFALIATLAVRSGFRAEFVDTILG 67
Query: 64 INGHVVIQQ---------KYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
N HV + L DY +A+R+ +P V +V P V GQ +
Sbjct: 68 ANAHVTVYNSGAVDATGRVDRSLEDYAAMADRVRAVPGVTRVAPLVKGQVMANARDRNAG 127
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ + + + V + +G+ IG +A+ LG+++GD+I ++SP
Sbjct: 128 VQVYGITAQDLATI--PRVADPETGVGDIARFDQGIAIGSGVAQELGVTVGDRIKLISPN 185
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G TP+G R +Y V+ +F D D Y+ EAQ +FN + +EV V +P
Sbjct: 186 GVKTPLGTSPRVNAYEVVYIFTAGRYDIDRVRAYLPFAEAQSFFNRDGRADELEVMVAEP 245
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + ++ G ++ WQ F E
Sbjct: 246 ERVYDLTVPLLEAAGERALLWTWQDASGSFLRALE 280
>gi|270261438|ref|ZP_06189711.1| hypothetical protein SOD_a06700 [Serratia odorifera 4Rx13]
gi|270044922|gb|EFA18013.1| hypothetical protein SOD_a06700 [Serratia odorifera 4Rx13]
Length = 400
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 101/267 (37%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF +D+ +L
Sbjct: 1 MYQPVALFIGLRYMRGRASDRFGRFVSWLSTIGITLGVMALVTVLSVMNGFEKDLENNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ +I + Q A+ + V L S S + +
Sbjct: 61 GLMPQALITSPQGSINPQQIPASMAQGL---QGVSRVAPLTTGDVVLQSARSVAVGVMLG 117
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + +IIG+ LA LG+ GD++ ++ P
Sbjct: 118 VNPDEADPLTQYLVNVKQQQLQPGQYNIIIGEQLAGQLGVKRGDQLRVMVPSASQFTPMG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + ++ Q+A ++G +F++ P ++
Sbjct: 178 RIPSQRLFTIIGTFHANSEVDGTQMLVNQQDASRLMRYPAGNITGWRLFLQQPLTVDTLS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW++R F
Sbjct: 238 ---QQKLPQGAQWKDWRERKGELFQAV 261
>gi|238920222|ref|YP_002933737.1| outer membrane-specific lipoprotein transporter subunit LolC
[Edwardsiella ictaluri 93-146]
gi|238869791|gb|ACR69502.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 400
Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats.
Identities = 61/268 (22%), Positives = 109/268 (40%), Gaps = 7/268 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF D+ + +L
Sbjct: 1 MHQPVALFIGLRYMRGRASDRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERDLEQSIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ V+ L ++ A+ L +P V + P +G + S G GV++
Sbjct: 61 NLMPQAVVTTPQGQLDPARYPASLLQGLPGVHRAAPLTTGDVVLQSPHSVGVGVMIGVNP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + S I+G LA LG+ GD++ ++ P
Sbjct: 121 DEAD---PLDRYLNGVSQSALQPGQYRAILGSQLAAELGVKAGDRVRLMVPSASQFTPMG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + ++ Q+A +SG +F+ P IE
Sbjct: 178 RIPSQRIFTVIGTFNADSEVDQTQLLVNQQDASRLMRYPLGHISGWRLFMDRPLDIEAL- 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L +G+V DW+ R F +
Sbjct: 237 --VAHALPDGLVWQDWRARKGELFQAVK 262
>gi|91205015|ref|YP_537370.1| lipoprotein releasing system, transmembrane protein [Rickettsia
bellii RML369-C]
gi|91068559|gb|ABE04281.1| Lipoprotein releasing system, transmembrane protein [Rickettsia
bellii RML369-C]
Length = 415
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 83/264 (31%), Positives = 134/264 (50%), Gaps = 1/264 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ F VA+RY + + F+SI S S +GVMIGV ALIVVMSVMNGF ++ K ++G+
Sbjct: 4 NNFIFTVAFRYFKAKKNEKFVSIISGFSLLGVMIGVAALIVVMSVMNGFHTELTKNIIGL 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
NG +VI + + +Y+ I +L V V ++ ++ + SG +++GI +
Sbjct: 64 NGDIVISPQTSSIDNYEEIKAKLLQQNYVKHV-NIIANGQALALGKNNNSGAIIKGIDLN 122
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
D F ++F + +G+ LA NLG+++ DK+ ++SP T G
Sbjct: 123 DLKLKNEIFKNVNFGSFDNFHGKNVIALGQGLAANLGVTVNDKVKLISPNSISTAFGSVP 182
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
RSK + V+ +F DYD+ + M L+ AQ + +L N ++ IEV PD +
Sbjct: 183 RSKEFKVIAIFNSGMYDYDSATILMPLEAAQNFLSLGNNINLIEVNTLHPDKALAYSYKV 242
Query: 245 VRILGNGVVVIDWQQRYQIFFSCY 268
+LG + + WQ F S
Sbjct: 243 QLLLGTNLQIFSWQTLNSQFLSAL 266
>gi|153837308|ref|ZP_01989975.1| lipoprotein-releasing system transmembrane protein LolC [Vibrio
parahaemolyticus AQ3810]
gi|149749339|gb|EDM60112.1| lipoprotein-releasing system transmembrane protein LolC [Vibrio
parahaemolyticus AQ3810]
Length = 405
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 65/268 (24%), Positives = 113/268 (42%), Gaps = 7/268 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RYL + F S++S G+ IGVMAL+ V+SVMNGF + +R+L
Sbjct: 4 MYHPISLFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMALVTVLSVMNGFEAQLKERIL 63
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H VI Q + + + DV + P V G+A + + +G L+
Sbjct: 64 GVLPHAVISQHDGRTPLTESAPQFIQAMSDVAEPEPVVRGEAVIQSSAQLTAGYLIGIEP 123
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G +S+ V +G LAR+L +SIGDK+ ++
Sbjct: 124 KKGD---PIANHLIAGRLSSLQAGEYKVFLGHSLARSLKVSIGDKVRLMVTNATQFTPLG 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + D D ++ +++ +A L + VSG VF DP +
Sbjct: 181 RIPSQRNFTVAGIFNTGSDVDGQLMIVNMADAAKLMRLPKDTVSGWRVFFSDPFMVTDFA 240
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + G DW+ + F +
Sbjct: 241 D---KPMPEGWQWSDWRAQRGELFQAVK 265
>gi|108807894|ref|YP_651810.1| outer membrane-specific lipoprotein transporter subunit LolC
[Yersinia pestis Antiqua]
gi|167401744|ref|ZP_02307235.1| lipoprotein-releasing system, transmembrane protein lolC [Yersinia
pestis biovar Antiqua str. UG05-0454]
gi|108779807|gb|ABG13865.1| lipoprotein releasing system, transmembrane protein [Yersinia
pestis Antiqua]
gi|167048849|gb|EDR60257.1| lipoprotein-releasing system, transmembrane protein lolC [Yersinia
pestis biovar Antiqua str. UG05-0454]
Length = 400
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 102/267 (38%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMALI V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRASDRFGRFVSWLSTIGITLGVMALITVLSVMNGFERNLQDTIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ +I L + A+ L + V V L S + +
Sbjct: 61 GLMPQALITTPQGSLDPNKISASTLKSLSG---VSDIVPLTTADVVLQSARNLAAGVMLG 117
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++ +I+G+ LA LG+ G+ + ++ P
Sbjct: 118 VDPQQHEPLANYLVNVDIKALAPGSYNIILGEKLAGQLGVKRGETLRLMVPSASQFTPMG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + ++ Q+A ++G +F+ P +++
Sbjct: 178 RIPSQRVFNIIGTFAANSEVDGYQILVNQQDASRLMRYPLGNITGWRLFLSQPLSVDSLS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G V DW+ R F
Sbjct: 238 ---QQSLPEGTVWKDWRDRKGELFQAV 261
>gi|28897751|ref|NP_797356.1| hypothetical protein VP0977 [Vibrio parahaemolyticus RIMD 2210633]
gi|308094432|ref|ZP_05889273.2| outer membrane-specific lipoprotein transporter subunit [Vibrio
parahaemolyticus AN-5034]
gi|308095507|ref|ZP_05906436.2| outer membrane-specific lipoprotein transporter subunit [Vibrio
parahaemolyticus Peru-466]
gi|308126688|ref|ZP_05911870.2| outer membrane-specific lipoprotein transporter subunit [Vibrio
parahaemolyticus AQ4037]
gi|28805964|dbj|BAC59240.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|308085453|gb|EFO35148.1| outer membrane-specific lipoprotein transporter subunit [Vibrio
parahaemolyticus Peru-466]
gi|308093816|gb|EFO43511.1| outer membrane-specific lipoprotein transporter subunit [Vibrio
parahaemolyticus AN-5034]
gi|308110358|gb|EFO47898.1| outer membrane-specific lipoprotein transporter subunit [Vibrio
parahaemolyticus AQ4037]
Length = 405
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 65/268 (24%), Positives = 113/268 (42%), Gaps = 7/268 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RYL + F S++S G+ IGVMAL+ V+SVMNGF + +R+L
Sbjct: 4 MYHPISLFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMALVTVLSVMNGFEAQLKERIL 63
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H VI Q + + + DV + P V G+A + + +G L+
Sbjct: 64 GVLPHAVISQHDGRTPLTESAPQFIQAMSDVAEPEPVVRGEAVIQSSAQLTAGYLIGIEP 123
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G +S+ V +G LAR+L +SIGDK+ ++
Sbjct: 124 KKGD---PIANHLIAGRLSSLQAGEYKVFLGHSLARSLKVSIGDKVRLMVTNATQFTPLG 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + D D ++ +++ +A L + VSG VF DP +
Sbjct: 181 RIPSQRNFTVAGIFNTGSDVDGQLMIVNMADAAKLMRLPKDTVSGWRVFFSDPFMVTDFA 240
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + G DW+ + F +
Sbjct: 241 D---KPMPEGWQWSDWRAQRGELFQAVK 265
>gi|256023186|ref|ZP_05437051.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia sp. 4_1_40B]
Length = 399
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 101/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q + L S S + +
Sbjct: 61 GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVA----PITTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ VI+G+ LA LG++ GD+I ++ P
Sbjct: 117 IDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + +++++A ++G +++ +P ++
Sbjct: 177 RIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW+ R F
Sbjct: 237 ---QQKLPEGSKWQDWRDRKGELFQAV 260
>gi|269139411|ref|YP_003296112.1| lipoprotein releasing system, transmembrane [Edwardsiella tarda
EIB202]
gi|267985072|gb|ACY84901.1| lipoprotein releasing system, transmembrane [Edwardsiella tarda
EIB202]
Length = 400
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 62/268 (23%), Positives = 109/268 (40%), Gaps = 7/268 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF D+ + +L
Sbjct: 1 MHQPVALFIGLRYMRGRASDRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERDLEQSIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ V+ L ++ A+ L +P V +V P +G + S G GV++
Sbjct: 61 NLMPQAVVTTPQGQLDPARYPASLLQGLPGVHRVAPLTTGDVVLQSPHSVGVGVMIGVNP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S I+G LA LG+ GD++ ++ P
Sbjct: 121 TEAD---PLDRYLNGVSQSALQPGQYRAILGSQLAAELGVKAGDRVRLMVPSASQFTPMG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + ++ Q+A +SG +F+ P IE
Sbjct: 178 RIPSQRIFTVIGTFNADSEVDQTQLLVNQQDASRLMRYPLGHISGWRLFMDRPLDIEAL- 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L +G+V DW+ R F +
Sbjct: 237 --VAHALPDGLVWQDWRARKGELFQAVK 262
>gi|238762214|ref|ZP_04623186.1| Lipoprotein-releasing system transmembrane protein lolC [Yersinia
kristensenii ATCC 33638]
gi|238699561|gb|EEP92306.1| Lipoprotein-releasing system transmembrane protein lolC [Yersinia
kristensenii ATCC 33638]
Length = 400
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 56/267 (20%), Positives = 105/267 (39%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMALI V+SVMNGF D+ +L
Sbjct: 1 MYQPVALFIGLRYMRGRASDRFGRFVSWLSTIGITLGVMALITVLSVMNGFERDLQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ +I L + A+ L + V V L S + +
Sbjct: 61 GLMPQALISTPQGSLDPSKMPASSLKSL---TGVTDVVPLTTADVVLQSARNLAAGVMLG 117
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S ++ + +I+G+ LA LG+ G+ + ++ P
Sbjct: 118 VDPNQHEPLSDYLVNVHLKDLQPGSYNIILGEKLAGQLGVKRGETLRLMVPSASQFTPMG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + ++ Q+A ++G +F+ P A++
Sbjct: 178 RIPSQRLFNIIGTFAADSEVDGYQMLVNQQDASRLMRYPAGNITGWRLFLSQPLAVDSLS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G+V DW++R F
Sbjct: 238 ---QQTLPEGMVWKDWRERKGELFQAV 261
>gi|253989206|ref|YP_003040562.1| outer membrane-specific lipoprotein transporter subunit LolC
[Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
gi|253780656|emb|CAQ83818.1| lipoprotein releasing system transmembrane protein lolc
[Photorhabdus asymbiotica]
Length = 400
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 55/267 (20%), Positives = 111/267 (41%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + RY+ + F S++S IG+ +GV ALI V+SVMNGF + +L
Sbjct: 1 MLQSVSLFIGLRYMRGRAADKFGRFVSWLSAIGITLGVAALITVLSVMNGFERSLETSIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G ++ L + +A+ L + + ++ P G + + G GV++ S
Sbjct: 61 GFMPQAIVTSASGSLNPTEHLASELANLKQINRITPLTMGDVVLQSARNVGVGVMLGITS 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + I+G+ LA LG+ GD++ ++ P
Sbjct: 121 DEYE---PLTEYLVNTDRHQLEPGSYNAILGEKLAEELGVKRGDRVRLMVPGASQLTPMG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ ++ + D + ++ Q+A ++G +++K+P A++
Sbjct: 178 RIPSQRLFMIVGTFASNSEVDGTQILVNQQDAARLMRYPLGNITGWRLYLKEPLAVDSLS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
I + G++ DW++R FF
Sbjct: 238 LQI---MPEGLLWKDWRERKGEFFQAV 261
>gi|120598670|ref|YP_963244.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Shewanella sp. W3-18-1]
gi|120558763|gb|ABM24690.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella sp. W3-18-1]
Length = 410
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 65/271 (23%), Positives = 110/271 (40%), Gaps = 5/271 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ V +RY + + NAF S + + G+ +GV ALIVV SVMNG + +R+L
Sbjct: 1 MNLGIPFYVGYRYWRARKANAFASFITLFAVSGIFLGVAALIVVSSVMNGLEGQLKQRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G + PL D+ AN L +P V V P VS QA V ++ + +
Sbjct: 61 GAVP-QLTVYTSAPLNDWTEQANVLKALPGVQGVTPSVSTQAMVQSAANIRAVQVFGVFP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G +I+G +LAR L ++ GD + +LS G V
Sbjct: 120 ELAAKLSVIAQHTYSGAFDELVAGQYKIILGSELARQLKVNPGDTVRLLSGDGVVYSPFG 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTH 241
+ S+ ++ D G+ Y+ Q+A+ + + + +++ DP +
Sbjct: 180 PVPSQRKFLVSGIFEMGSQVDAGVAYIHYQDAKRLMRQPSEAIDQLRLYLDDPFSAPALS 239
Query: 242 ENIVRIL---GNGVVVIDWQQRYQIFFSCYE 269
+ IL DW+ Y F +
Sbjct: 240 PKVQDILLKQNIEATTSDWRDTYGHLFGAVK 270
>gi|149914366|ref|ZP_01902897.1| lipoprotein releasing system transmembrane protein, putative
[Roseobacter sp. AzwK-3b]
gi|149811885|gb|EDM71718.1| lipoprotein releasing system transmembrane protein, putative
[Roseobacter sp. AzwK-3b]
Length = 416
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 74/270 (27%), Positives = 120/270 (44%), Gaps = 12/270 (4%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
++AWRYL + R +S ++IS IG+ + V ALI +SV +GFR + + +LG N HV
Sbjct: 1 MIAWRYLRAKRAEGGVSTMTWISLIGITLAVFALIATLSVRSGFRAEFVDTILGANAHVT 60
Query: 70 IQQKYYPLVD----------YQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
+ Y+ +A + + V +V P V GQ + S +
Sbjct: 61 VYNMGTVDAQTGRLDRTLSEYEAMAESVRAVEGVTRVAPLVKGQVMANARDSNAGVQVFG 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + + +G+ IG +AR LG+ +GD+I ++SP G T
Sbjct: 121 IKPEDLVTI--PRIADPATGRGDITAFSRGIAIGSGVARELGVGVGDRIRLISPNGVRTA 178
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
G R +Y V+ +F D D VY+ +E+Q +FN E +EV V+DPD +E
Sbjct: 179 FGTSPRINAYDVVYIFSAGRYDIDRVRVYLPFEESQSFFNREGRADELEVMVRDPDRVED 238
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ G+ V W+ F E
Sbjct: 239 MTLPLIAAAGDRAQVWTWKDASGGFLRALE 268
>gi|323175652|gb|EFZ61246.1| lipoprotein-releasing system transmembrane protein lolC
[Escherichia coli 1180]
gi|323942585|gb|EGB38752.1| LolC/E family protein lipoprotein releasing system [Escherichia
coli E482]
Length = 265
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 101/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q + L S S + +
Sbjct: 61 GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVA----PITTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ VI+G+ LA LG++ GD+I ++ P
Sbjct: 117 IDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + +++++A ++G +++ +P ++
Sbjct: 177 RIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW+ R F
Sbjct: 237 ---QQKLPEGSKWQDWRDRKGELFQAV 260
>gi|293606104|ref|ZP_06688469.1| lipoprotein ABC superfamily ATP binding cassette transporter,
permease protein [Achromobacter piechaudii ATCC 43553]
gi|292815559|gb|EFF74675.1| lipoprotein ABC superfamily ATP binding cassette transporter,
permease protein [Achromobacter piechaudii ATCC 43553]
Length = 410
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 62/251 (24%), Positives = 121/251 (48%), Gaps = 5/251 (1%)
Query: 24 FISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQ----KYYPLVD 79
FIS + S G+ +GV ALIVV+SVMNGF++++ R+L + H+ + L
Sbjct: 14 FISFIAASSMAGIALGVAALIVVLSVMNGFQKEVRDRMLSVLPHIELYIPGALPEQVLER 73
Query: 80 YQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGN 139
+Q A + P+V PFV+ Q + + + ++ + G
Sbjct: 74 WQQFATAAEQNPEVKAGAPFVAAQGMLVRGQALRGVQVRGIDPATEGNVSDLPRQMVSGK 133
Query: 140 VSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRF 199
+++ G GV++G +LA LG+ +GD + +++P G ++P G R + +TV+G+F
Sbjct: 134 LTDLKAGGFGVVLGNELADGLGVKVGDTLLMMAPQGSISPAGFAPRMRQFTVVGVFSSGH 193
Query: 200 PDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQ 259
+YD+ + ++ Q+A F G+ + + D + + +L V+ DW +
Sbjct: 194 YEYDSSLAFVDNQDAARVFRESGTA-GVRLRIADMQKAPEVANELKAVLPPYVMASDWSR 252
Query: 260 RYQIFFSCYES 270
+ +F+ ++
Sbjct: 253 NNRTWFAAVQT 263
>gi|68171289|ref|ZP_00544690.1| Protein of unknown function DUF214 [Ehrlichia chaffeensis str.
Sapulpa]
gi|88658053|ref|YP_506955.1| LolC/E family lipoprotein releasing system transmembrane protein
[Ehrlichia chaffeensis str. Arkansas]
gi|67999304|gb|EAM85952.1| Protein of unknown function DUF214 [Ehrlichia chaffeensis str.
Sapulpa]
gi|88599510|gb|ABD44979.1| lipoprotein releasing system transmembrane protein, LolC/E family
[Ehrlichia chaffeensis str. Arkansas]
Length = 410
Score = 126 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 80/267 (29%), Positives = 131/267 (49%), Gaps = 5/267 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +FE+++A RYL S+ S+ + +S +G+ +GV LIVVMSVMNGF E ++ V+
Sbjct: 1 MLLKFELMLALRYLRSSSSKFLCSMITMLSLVGITLGVATLIVVMSVMNGFGEKLLNCVV 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+NGH+VI DY+ IA + I V +P QA + S+ V+
Sbjct: 61 GLNGHIVIYFNDSVDYDYRSIAESIKGISGVKDAVPITENQAMIKSNSNVSGVVVRGIEK 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G++ G+ IG LA L ++ GDK+ I+S T +G
Sbjct: 121 QDIERNNIIVNNIVRGSIDE---FNDGIAIGIKLAEILHVNYGDKLTIVSSESISTVIGN 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K+Y + +F + +YD+ +VYM L +QL+F+ +N V IEV + D + + E
Sbjct: 178 IPRMKTYKIAAVFDVGMYEYDSTLVYMPLHASQLFFHYDNRVKSIEVSILDVNKSSEMLE 237
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I + DW+ + +F +
Sbjct: 238 IIESK--TNMKGEDWKMQQGSYFHALK 262
>gi|157370245|ref|YP_001478234.1| outer membrane-specific lipoprotein transporter subunit LolE
[Serratia proteamaculans 568]
gi|157322009|gb|ABV41106.1| lipoprotein releasing system, transmembrane protein LolE [Serratia
proteamaculans 568]
Length = 415
Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 52/265 (19%), Positives = 106/265 (40%), Gaps = 1/265 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ + A R+ ++ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L +
Sbjct: 4 ASLSFLTALRFSRGRKRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELKNRILAV 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H I+ P D+ I R++ +P ++ P+++ + + V V+G+
Sbjct: 64 VPHGEIEPVKQPFKDWSSILQRVEKVPGILAAAPYINFTGLMENG-AQLRAVGVKGVDPQ 122
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ L G+ +F G+ +I + + M +
Sbjct: 123 QENQLSALPKYVQGDAWANFKSGEQQVILGKGVADALGVKQGSYVTVMIPNSDPQMKLLQ 182
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + D+ + + L +AQ Y ++ ++V+GI + V D A K +
Sbjct: 183 PKRIRLHVTGILQLSGQLDHSLAMVPLADAQQYLDMGDSVTGIAIKVNDVFAANKLVRDA 242
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ + V + W Y + +
Sbjct: 243 GEVTNSYVYIKSWIGTYGYMYRDIQ 267
>gi|146329236|ref|YP_001210109.1| ABC-type lipoprotein releasing system protein LolC [Dichelobacter
nodosus VCS1703A]
gi|146232706|gb|ABQ13684.1| ABC-type lipoprotein releasing system protein LolC [Dichelobacter
nodosus VCS1703A]
Length = 415
Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 61/269 (22%), Positives = 112/269 (41%), Gaps = 2/269 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ + +RY ++ R + F+ + + ++ +G+ IG+ ALIVV+SVMNG + ++L
Sbjct: 1 MNILAHKIGFRYSYARRGSQFVGLNAILAIVGIAIGIAALIVVLSVMNGVMVQVRDKMLS 60
Query: 64 INGHV--VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ V + L I + P++ GQ + S VL
Sbjct: 61 MTAQVSLRSYSDDRMVPLDFDPKPYLSPITKIHAWAPYIQGQGLIGDGQSFQGVVLQGID 120
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ + G+I+GK +A L +GDKI ++ P + G
Sbjct: 121 PTKEDKVSSTFAQLDEATRARLVAGEYGIILGKGMAEVLDAHLGDKITVIVPQVTASAAG 180
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ R K +T+LG F +DN M ++ + +A L + +SG + + DP
Sbjct: 181 LLPRLKRFTLLGTFSSGHYQFDNQMAWIHIADASKLLQLPDGISGYHIRIDDPMHAPLIR 240
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ I L G+ DW + +FS ++
Sbjct: 241 DQIQPHLPYGIFASDWSRDQSSYFSAVQT 269
>gi|270261440|ref|ZP_06189713.1| hypothetical protein SOD_a06720 [Serratia odorifera 4Rx13]
gi|270044924|gb|EFA18015.1| hypothetical protein SOD_a06720 [Serratia odorifera 4Rx13]
Length = 415
Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 53/265 (20%), Positives = 106/265 (40%), Gaps = 1/265 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ + A R+ ++ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L +
Sbjct: 4 ASLSFLTALRFSRGRKRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELKNRILAV 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H I+ P D+ I R++ +P ++ P+++ + + V V+G+
Sbjct: 64 VPHGEIEPVKQPFKDWSSILQRVEKVPGILAAAPYINFTGLMENG-AQLRAVGVKGVDPQ 122
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
S L G+ +F G+ +I + + M +
Sbjct: 123 QESQLSALPKYVQGDAWANFKSGEQQVILGKGVADALGVKQGSYVTVMIPNSDPQMKLLQ 182
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + D+ + + L +AQ Y ++ ++V+GI + V D A K +
Sbjct: 183 PKRIRLHVTGILQLSGQLDHSLAMVPLADAQQYLDMGDSVTGIAIKVNDVFAANKLVRDA 242
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ + V + W Y + +
Sbjct: 243 GEVTNSYVYIKSWIGTYGYMYRDIQ 267
>gi|312883536|ref|ZP_07743261.1| outer membrane-specific lipoprotein transporter subunit LolE
[Vibrio caribbenthicus ATCC BAA-2122]
gi|309368759|gb|EFP96286.1| outer membrane-specific lipoprotein transporter subunit LolE
[Vibrio caribbenthicus ATCC BAA-2122]
Length = 414
Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 104/267 (38%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F +++ +R+ + ++N +S S S IG+ +GV +I+ +S MNGF ++ RVL
Sbjct: 1 MFKSLSLLIGFRFSRARQRNKMVSFISMSSTIGIAVGVAVIIIGLSAMNGFERELENRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H ++ P+ ++ I + + P+V+ P+V A S + VRG+
Sbjct: 61 SVIPHGELEGVRGPISNWNSIIEQSEQHPEVVAAAPYVKITALAEKGSL-LKAIEVRGVD 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S + + + N + G+ II L +
Sbjct: 120 PSMERGVSDIPNFVTKNAWQNLKAGERQIILGKGVAEKLSVTTGDYVSLMIPTKGAIQKV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + + + +AQ Y N +V+G+ + K+
Sbjct: 180 QSLKRVRLKVIGLLSLNGQIDHSLALIPIADAQKYSNFGTSVTGVALKFKNVLKANSILR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L V + WQQ++ + +
Sbjct: 240 EVGGTLDTYVYLKSWQQKFGFLYRDIQ 266
>gi|170720857|ref|YP_001748545.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas putida W619]
gi|169758860|gb|ACA72176.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Pseudomonas putida W619]
Length = 416
Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 69/268 (25%), Positives = 121/268 (45%), Gaps = 3/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RY + R+N F+S S S IG+ +GV+ +IVV+SVMNGF +M RVL
Sbjct: 1 MFRPLFAFIGTRYTRAKRRNHFVSFISLTSMIGLALGVVVMIVVLSVMNGFDHEMRTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H + + P+ D+ +A ++ P V+ V P+ Q ++ +L
Sbjct: 61 GMVPHATL-ESGQPINDWPALAQQVKQNPQVLAVAPYTQMQGLLTFDGKVQKVLLNGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G + G++IG A LG++IGDK+ ++P VTP GM
Sbjct: 120 GREREVSIIDNFIQQGRLDQLAPGEWGIMIGDKAAAKLGVAIGDKLTFVAPEVSVTPAGM 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
R K +TV+G F + + D + ++ + + + V G+ + D +
Sbjct: 180 FPRMKRFTVVGTFHVGAGEIDGYLGLTNIADLSRLHRWKADQVQGLRLKFDDLFQAPRVA 239
Query: 242 ENIVRILGN-GVVVIDWQQRYQIFFSCY 268
+I + LG+ DW + + +
Sbjct: 240 WSIAQQLGDQEYYSRDWTRTHGNLYQAI 267
>gi|111073630|emb|CAL29492.1| hypothetical protein OW2-F [Wolbachia endosymbiont of Onchocerca
volvulus]
Length = 409
Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 85/268 (31%), Positives = 140/268 (52%), Gaps = 6/268 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ FEV +A RYL + F SI + S +G+ +GV LIVVMSVMNGF+ ++ +L
Sbjct: 1 MSITFEVTMAIRYLQAKNAK-FCSITTLFSIVGIALGVATLIVVMSVMNGFKVKLLDLIL 59
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
GI+GH+ + DY+ ++ ++ IP V+K +P + Q V+ S ++ +
Sbjct: 60 GIDGHINVYFDRNVNSDYRAVSKSIEKIPGVLKAIPMTNDQVIVAANDRIASSIVRSMST 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
F + + GNV KGVI+G L L I+ GDKI ++SP G G+
Sbjct: 120 KDLFYNTTITDNIIVGNVRE---FDKGVIVGARLVEALNINYGDKIVLISPEGFDALFGV 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ K Y V+ +F M +YD+ ++YM ++ AQ +FN +++V IEVFV D + +
Sbjct: 177 MPKVKEYEVVAIFDMGMFEYDSTLIYMPIKSAQAFFNYKDSVRNIEVFVDDTAGVSELAS 236
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYES 270
I + G+ WQ ++ +F ++
Sbjct: 237 AIEKK--TGMKAESWQLQHSNYFHALKT 262
>gi|194433642|ref|ZP_03065918.1| lipoprotein-releasing system transmembrane protein LolC [Shigella
dysenteriae 1012]
gi|194418071|gb|EDX34164.1| lipoprotein-releasing system transmembrane protein LolC [Shigella
dysenteriae 1012]
gi|332092818|gb|EGI97886.1| lipoprotein-releasing system transmembrane protein lolC [Shigella
dysenteriae 155-74]
Length = 399
Score = 126 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 101/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q + L S S + +
Sbjct: 61 GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVA----PITTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ VI+G+ LA LG++ GD+I ++ P
Sbjct: 117 IDPAPKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRMMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + +++++A ++G +++ +P ++
Sbjct: 177 RIPSQRLFNVIGTFAANSEVDGNEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW+ R F
Sbjct: 237 ---QQKLPEGSKWQDWRDRKGELFQAV 260
>gi|170020489|ref|YP_001725443.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli ATCC 8739]
gi|188494417|ref|ZP_03001687.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli 53638]
gi|169755417|gb|ACA78116.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli ATCC 8739]
gi|188489616|gb|EDU64719.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli 53638]
Length = 399
Score = 126 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 101/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q + L S S + +
Sbjct: 61 GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVA----PITTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ VI+G+ LA LG++ GD+I ++ P
Sbjct: 117 IDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + +++++A ++G +++ +P ++
Sbjct: 177 RIPSQRLFNVIGTFAANSEVDGNEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW+ R F
Sbjct: 237 ---QQKLPEGSKWQDWRDRKGELFQAV 260
>gi|238749648|ref|ZP_04611153.1| Lipoprotein-releasing system transmembrane protein lolC [Yersinia
rohdei ATCC 43380]
gi|238712303|gb|EEQ04516.1| Lipoprotein-releasing system transmembrane protein lolC [Yersinia
rohdei ATCC 43380]
Length = 400
Score = 126 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 55/267 (20%), Positives = 100/267 (37%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMALI V+SVMNGF D+ +L
Sbjct: 1 MYQPVALFIGLRYMRGRASDRFGRFVSWLSTIGITLGVMALITVLSVMNGFERDLQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ +I L + A+ L + V V L S + +
Sbjct: 61 GLMPQALITTPQGSLDPSKIPASSLKSLEG---VTDIVPLTTADVVLQSARNLAAGVMLG 117
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S + + +I+G+ LA LG+ G+ + ++ P
Sbjct: 118 IDPQQREPLSDYLVNVKLKDLQPGSYNMILGEKLAGQLGVKRGETLRLMVPSASQFTPMG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + ++ Q+A ++G +F+ P ++
Sbjct: 178 RIPSQRLFNVIGTFAADSEVDGYQILVNQQDASRMMRYPAGNITGWRLFLSQPLTVDSLS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G V DW+ R F
Sbjct: 238 ---QQTLPEGTVWKDWRDRKGELFQAV 261
>gi|254452272|ref|ZP_05065709.1| ABC lipoprotein efflux transporter, inner membrane subunit, LolE
[Octadecabacter antarcticus 238]
gi|198266678|gb|EDY90948.1| ABC lipoprotein efflux transporter, inner membrane subunit, LolE
[Octadecabacter antarcticus 238]
Length = 438
Score = 126 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 77/284 (27%), Positives = 131/284 (46%), Gaps = 21/284 (7%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FSRFE ++AWRY+ + R +SI ++IS IGV + V ALI V++V +GFR D + ++G
Sbjct: 8 FSRFEWMIAWRYIRAKRAEGGVSIMTWISLIGVTLAVFALIAVLAVRSGFRADFVDTIVG 67
Query: 64 INGHVVIQQKYYPLV-------------------DYQFIANRLDFIPDVIKVLPFVSGQA 104
N H+ ++Q + V + +A +L I V + P + G+
Sbjct: 68 ANAHLTVRQNFMETVTVTQGDQSVDVTRRVDTIANGDELAAQLRAIDGVTRAAPIIRGEG 127
Query: 105 FVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISI 164
+ + + + + +DF GV +G +A NLG+S+
Sbjct: 128 LATVGAQSSFVQVYGITPDDLRDIPLVLTPQQSSGSIDDF--ANGVALGSGVANNLGVSV 185
Query: 165 GDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAV 224
GD+IN+LS G T G R ++ V+ +F+ D VY+ L +AQ +++ +
Sbjct: 186 GDRINLLSAEGVNTAAGRSPRRNTFDVVYIFQTGRYITDISRVYLPLAQAQTFYSRDGVH 245
Query: 225 SGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
IE++V DPD +E + R LG + W+ +
Sbjct: 246 DEIEIYVADPDRVEDWISPLYRALGPEAFLYSWKDNEGAYLRAL 289
>gi|148244906|ref|YP_001219600.1| lipoprotein ABC transporter permease LolE [Candidatus
Vesicomyosocius okutanii HA]
gi|146326733|dbj|BAF61876.1| lipoprotein ABC transporter permease LolE [Candidatus
Vesicomyosocius okutanii HA]
Length = 411
Score = 126 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 81/265 (30%), Positives = 136/265 (51%), Gaps = 4/265 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
E I++ +YL SN+K FIS +S +G+++ V+ LI V+SVMNGF +++ RVL
Sbjct: 1 MSIEFIISNQYLRSNQKKGFISFIPGVSIVGLILSVVTLITVLSVMNGFHKELRDRVLNT 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H I Q + ++Q + +++ P+V+ P++ A +S +G GV VRGI +
Sbjct: 61 ISHSYITQYNNLVDNWQNLQTKINKHPNVVSTSPYIEKYALLS-THNGTQGVNVRGIRPN 119
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ +N ++IG LA LG+ IGDKI +L+P +G+
Sbjct: 120 LEKKTSILLDKIKSGNANLLKSD--ILIGTGLATQLGLIIGDKITLLTPKLSSNIIGIQP 177
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN- 243
R K +T+ G+F +YDN + ++SL++AQ + +++ VSGI + V D +K
Sbjct: 178 RFKRFTISGIFDAGISEYDNNLAFISLEQAQKLYIMKDKVSGIRLKVDDLFNAKKITNEI 237
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCY 268
I +L IDW ++ F
Sbjct: 238 ITNLLDGRYYGIDWTEQKANFIKAL 262
>gi|197284763|ref|YP_002150635.1| outer membrane-specific lipoprotein transporter subunit LolC
[Proteus mirabilis HI4320]
gi|194682250|emb|CAR41981.1| lipoprotein releasing system, transmembrane protein [Proteus
mirabilis HI4320]
Length = 400
Score = 126 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 61/268 (22%), Positives = 98/268 (36%), Gaps = 7/268 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+++ + RY+ + F S++S +G+M+GV ALI V SVMNGF + +L
Sbjct: 1 MYNSVSFFIGLRYMRGRAVDKFGRFVSWLSALGIMLGVAALITVTSVMNGFERSLQNSIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
VI L A L V+ V L S + + +
Sbjct: 61 AYIPQAVITTPNGQLPKQDSTAQMLL---KREDVINVVPLVEGDVVLQSKDNIGVGVMLG 117
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ YG+ S GVI+G LA+ L GD I ++ P
Sbjct: 118 IDKAQDEPLTQFIRYGDFSLLKPGEYGVILGSGLAKQLKTKEGDSIRLIVPGVSQLTPMG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
+ S+ + D D + ++ Q+A ++G +F P IEK
Sbjct: 178 RVPSQRLFTVKGIFQSGGDADASQLLVNQQDAARLMRYQPGNITGWRLFFSTPLNIEKYS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
L G+ DW++R FF +
Sbjct: 238 AE---PLPAGLSWKDWRERKGEFFQAVK 262
>gi|149911930|ref|ZP_01900528.1| putative ABC transporter, integral membrane protein [Moritella sp.
PE36]
gi|149804977|gb|EDM65006.1| putative ABC transporter, integral membrane protein [Moritella sp.
PE36]
Length = 415
Score = 126 bits (314), Expect = 5e-27, Method: Composition-based stats.
Identities = 47/267 (17%), Positives = 94/267 (35%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RY S R+N FI+ S S IG+ +GVM LI+ +S MNGF ++ R+L
Sbjct: 1 MFRPLAAYIGLRYTSSKRRNGFIAFISASSTIGIALGVMVLIIGLSAMNGFEYELKNRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ + ++ P D+Q +L P+V+ PF+ + + + L S
Sbjct: 61 AVVPNGELEGVSQPFDDWQRTQEQLLAHPEVVGAAPFIKLNGLLQKGNELKAVQLRAVDS 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
++ + G + D + +++ + +
Sbjct: 121 EAEKQVSEVYRYVAEGRWDSLSDPTNNRTVVIGRGIAKELNLELGDPVTVLLSQQSGRSF 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + DN + Y+ L AQ + G+ + V D + +
Sbjct: 181 KAPRRFRFTVSGIIHLSGQLDNNLAYIPLSAAQDIQDKAFKADGMSIKVTDIFSANRIVR 240
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
L + + + W + +
Sbjct: 241 EAGNQLDHYLYIRSWMTSQGFLYQDIQ 267
>gi|26988878|ref|NP_744303.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Pseudomonas putida KT2440]
gi|24983686|gb|AAN67767.1|AE016408_5 lipoprotein releasing system, permease protein [Pseudomonas putida
KT2440]
gi|313499727|gb|ADR61093.1| LolC [Pseudomonas putida BIRD-1]
Length = 416
Score = 126 bits (314), Expect = 5e-27, Method: Composition-based stats.
Identities = 71/268 (26%), Positives = 121/268 (45%), Gaps = 3/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RY + R+N F+S S S IG+ +GV+ +IVV+SVMNGF +M RVL
Sbjct: 1 MFRPLFAFIGTRYTRAKRRNHFVSFISLTSMIGLALGVVVMIVVLSVMNGFDHEMRTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H + + P+ D+Q +A ++ P V+ V PF Q ++ +L
Sbjct: 61 GMIPHATL-ESGQPIADWQALAQQVKQNPQVVAVAPFTQMQGLLTHDGKVQKVLLNGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G + G++IG A LG++IGDK+ ++P VTP GM
Sbjct: 120 AREREVSIIDNFVLQGRLDQLAPGEWGIMIGDKAAAKLGVAIGDKLTFVAPEVSVTPAGM 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLENAVSGIEVFVKDPDAIEKTH 241
R K +TV+G F + + D + ++ + + V G+ + D +
Sbjct: 180 FPRMKRFTVVGTFHVGAGEIDGYLGLTNISDLSRLHRWKPDQVQGLRLKFDDLFQAPRVA 239
Query: 242 ENIVRILGN-GVVVIDWQQRYQIFFSCY 268
+I + LG+ DW + + +
Sbjct: 240 WSIAQQLGDQEFYSRDWTRTHGNLYQAI 267
>gi|191168577|ref|ZP_03030361.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli B7A]
gi|193066303|ref|ZP_03047354.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli E22]
gi|194429798|ref|ZP_03062312.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli B171]
gi|209918372|ref|YP_002292456.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli SE11]
gi|256018628|ref|ZP_05432493.1| outer membrane-specific lipoprotein transporter subunit LolC
[Shigella sp. D9]
gi|260843356|ref|YP_003221134.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli O103:H2 str. 12009]
gi|293414409|ref|ZP_06657058.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli B185]
gi|293433405|ref|ZP_06661833.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli B088]
gi|300917887|ref|ZP_07134520.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 115-1]
gi|307310107|ref|ZP_07589757.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli W]
gi|309796540|ref|ZP_07690947.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 145-7]
gi|190901371|gb|EDV61136.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli B7A]
gi|192926075|gb|EDV80718.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli E22]
gi|194412145|gb|EDX28453.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli B171]
gi|209911631|dbj|BAG76705.1| conserved hypothetical protein [Escherichia coli SE11]
gi|257758503|dbj|BAI30000.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli O103:H2 str. 12009]
gi|291324224|gb|EFE63646.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli B088]
gi|291434467|gb|EFF07440.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli B185]
gi|300414877|gb|EFJ98187.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 115-1]
gi|306909825|gb|EFN40319.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli W]
gi|308119852|gb|EFO57114.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 145-7]
gi|315060393|gb|ADT74720.1| outer membrane-specific lipoprotein transporter subunit
[Escherichia coli W]
gi|320201011|gb|EFW75595.1| Lipoprotein releasing system transmembrane protein LolC
[Escherichia coli EC4100B]
gi|323163660|gb|EFZ49482.1| lipoprotein-releasing system transmembrane protein lolC
[Escherichia coli E128010]
gi|323185761|gb|EFZ71122.1| lipoprotein-releasing system transmembrane protein lolC
[Escherichia coli 1357]
gi|323379047|gb|ADX51315.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli KO11]
gi|323947580|gb|EGB43584.1| LolC/E family protein lipoprotein releasing system [Escherichia
coli H120]
gi|324017514|gb|EGB86733.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 117-3]
gi|332089280|gb|EGI94386.1| lipoprotein-releasing system transmembrane protein lolC [Shigella
boydii 5216-82]
Length = 399
Score = 126 bits (314), Expect = 5e-27, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 101/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q + L S S + +
Sbjct: 61 GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVA----PITTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ VI+G+ LA LG++ GD+I ++ P
Sbjct: 117 IDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRMMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + +++++A ++G +++ +P ++
Sbjct: 177 RIPSQRLFNVIGTFAANSEVDGNEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW+ R F
Sbjct: 237 ---QQKLPEGSKWQDWRDRKGELFQAV 260
>gi|146293252|ref|YP_001183676.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Shewanella putrefaciens CN-32]
gi|145564942|gb|ABP75877.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella putrefaciens CN-32]
Length = 410
Score = 126 bits (314), Expect = 5e-27, Method: Composition-based stats.
Identities = 65/271 (23%), Positives = 111/271 (40%), Gaps = 5/271 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ V +RY + + NAF S + + G+ +GV ALIVV SVMNG + +R+L
Sbjct: 1 MNLGIPFYVGYRYWRARKANAFASFITLFAVSGIFLGVAALIVVSSVMNGLEGQLKQRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G + PL D+ AN L +P V V P VS QA V ++ + +
Sbjct: 61 GAVP-QLTVYTSTPLNDWTEQANVLKALPGVQGVTPSVSTQAMVQSAANIRAVQVFGVFP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G +I+G +LAR L ++ GD + +LS G V
Sbjct: 120 ELAAKLSVIAQHTYSGAFDELVAGQYKIILGSELARQLKVNPGDTVRLLSGDGVVYSPFG 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTH 241
+ S+ ++ D G+ Y+ Q+A+ + + + +++ DP +
Sbjct: 180 PVPSQRKFLVSGIFEMGSQVDAGVAYIHYQDAKRLMRQPSEAIDQLRLYLDDPFSAPALS 239
Query: 242 ENIVRILGNGVV---VIDWQQRYQIFFSCYE 269
+ IL + DW+ Y F +
Sbjct: 240 PKVQDILLKQHIEATTSDWRDTYGHLFGAVK 270
>gi|330954501|gb|EGH54761.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae Cit 7]
Length = 416
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 76/268 (28%), Positives = 122/268 (45%), Gaps = 3/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RY + R+N F+S S S IG+ +GV+ +IVV+SVMNGF +M RVL
Sbjct: 1 MFRPLFVFIGTRYTRAKRRNHFVSFISLTSMIGLALGVVVMIVVLSVMNGFDHEMRTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I + P+ D++ +A ++ P V+ V PF Q ++ +L
Sbjct: 61 GMVPHATI-ESADPITDWRGLAAKVQENPQVLAVAPFTQMQGLLTHDGKVQKVLLNGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G + + G++IG A LG+ IGDK+ ++P VTP GM
Sbjct: 120 LEERKVSIIDHFIKQGQLDSLSPGSFGIMIGDKAAAKLGVGIGDKLTFVAPEVTVTPAGM 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLENAVSGIEVFVKDPDAIEKTH 241
R K + V G+F + + D + +L + N V G+ + D A +T
Sbjct: 180 FPRMKRFEVTGIFHVGAGEIDGFLGLTNLDDLGRLHRWKPNQVQGLRLKFDDLFAAPRTS 239
Query: 242 ENIVRILG-NGVVVIDWQQRYQIFFSCY 268
I + LG N DW + + +
Sbjct: 240 WEIAQKLGENNFYSRDWTRTHGNLYQAI 267
>gi|157375966|ref|YP_001474566.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Shewanella sediminis HAW-EB3]
gi|157318340|gb|ABV37438.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella sediminis HAW-EB3]
Length = 416
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 64/272 (23%), Positives = 115/272 (42%), Gaps = 5/272 (1%)
Query: 2 SIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
++ + +RY + + N F S +F + G+++GV ALI+V SVMNG + +R+
Sbjct: 6 TMNFALSAHIGFRYWRARKANTFASFITFFAVSGILLGVAALIIVSSVMNGLEGQLKQRI 65
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
LG + PL D++ L +P V+ P +S QA V ++ + +
Sbjct: 66 LGAVP-QLTVHASQPLTDWEKQVQGLKNLPGVLGATPSISTQAMVQSQTNISAVQVYGIY 124
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ L+ F G+ R VI+G +LAR L + GD + +LS G V
Sbjct: 125 PAYEQELLRTMKRSFNGSFDKLEPRQYRVILGAELARRLDVVAGDTVRLLSGEGVVYSPL 184
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKT 240
+ S+ ++ D + Y+ ++AQ + + + +++ DP
Sbjct: 185 GPVPSQRKFIVAGVFEMGSQVDANLAYVHYEDAQRLMRQKSGEIKHLRLYLVDPFNAVSL 244
Query: 241 HENIVRILGN---GVVVIDWQQRYQIFFSCYE 269
+V N V DW++ Y FS +
Sbjct: 245 TSKVVEQFENQGIEVTTSDWRESYGHLFSAVK 276
>gi|330428034|gb|AEC19368.1| lipoprotein releasing system, transmembrane protein [Pusillimonas
sp. T7-7]
Length = 423
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 62/277 (22%), Positives = 125/277 (45%), Gaps = 12/277 (4%)
Query: 5 SRFEVIVAWRY-------LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDM 57
+E+ + RY R + F+S + S G+ +GV ALIVV+SVMNGF+ +
Sbjct: 1 MSYELWIGARYAGLVRARRRGGRGDRFVSFIAASSMAGIALGVAALIVVLSVMNGFQSQV 60
Query: 58 IKRVLGINGHVVIQQKYYPLVD----YQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGG 113
R+L + H+ + ++ IA+ P+V PFV+ Q + +
Sbjct: 61 RDRMLSVLPHIELYVPRMAPEQVLSEWRQIADSAKKNPEVQGTAPFVAAQGMIVRGEALS 120
Query: 114 SGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSP 173
+ + + + G + +++G LA ++G+ +GD + +L+P
Sbjct: 121 GVQIRGIAPDLESDVSDVAGQMISGQLDTLTSGSYSIVLGNQLANSVGVGVGDTVLVLAP 180
Query: 174 YGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKD 233
G ++P G R + +TV G+F + +YD + +++ ++A F ++ SG+ + + D
Sbjct: 181 QGSISPAGFTPRMRQFTVSGLFSSGYYEYDASLAFINYEDAARVFR-DSGASGVRLRIAD 239
Query: 234 PDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ + +L V DW Q + +F+ ++
Sbjct: 240 MQQAPLVAQALRDVLPPYVHAQDWTQNNRTWFAAVQT 276
>gi|261253315|ref|ZP_05945888.1| lipoprotein releasing system transmembrane protein LolC [Vibrio
orientalis CIP 102891]
gi|260936706|gb|EEX92695.1| lipoprotein releasing system transmembrane protein LolC [Vibrio
orientalis CIP 102891]
Length = 402
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 60/267 (22%), Positives = 104/267 (38%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RYL + F S++S G+ IGVM+L+ V+SVMNGF + R+L
Sbjct: 1 MFHPVSTFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKGRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ Q + + + D P V +A + S +G+L+
Sbjct: 61 GVLPQAIVSQTDGKTERTEQAPEFVRQLSDAAHPEPIVQSEAVLQSASQLSAGLLIGIKP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G + N + IG LAR+L +SIGDK+ ++
Sbjct: 121 SEHD---PIEQHLIAGRLENLQAGKYQIFIGHTLARSLDVSIGDKVRLMVTSASQFTPLG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
I S+ + D D ++ +Q+A L + ++G +F DP +
Sbjct: 178 RIPSQRLFTVAGIYNTGSDVDGQLMLTHIQDAGKLMRLKPDTMTGWRLFFNDPFVVADLS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW+ + F
Sbjct: 238 ---QQPLPQGWKWQDWRDQRGELFQAV 261
>gi|324117313|gb|EGC11220.1| LolC/E family protein lipoprotein releasing system [Escherichia
coli E1167]
Length = 399
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 101/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q + L S S + +
Sbjct: 61 GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVA----PITTGDMVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ VI+G+ LA LG++ GD+I ++ P
Sbjct: 117 IDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRMMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + +++++A ++G +++ +P ++
Sbjct: 177 RIPSQRLFNVIGTFAANSEVDGNEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW+ R F
Sbjct: 237 ---QQKLPEGSKWQDWRDRKGELFQAV 260
>gi|33596665|ref|NP_884308.1| lipoprotein releasing system transmembrane protein [Bordetella
parapertussis 12822]
gi|33573366|emb|CAE37350.1| lipoprotein releasing system transmembrane protein [Bordetella
parapertussis]
Length = 410
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 64/251 (25%), Positives = 120/251 (47%), Gaps = 5/251 (1%)
Query: 24 FISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQ----KYYPLVD 79
FIS + S G+ +GV ALIVV+SVMNGF++++ R+L + H+ + L
Sbjct: 14 FISFIAATSMAGIALGVAALIVVLSVMNGFQKEVRDRMLSVLPHIELYIPGAAPERVLQQ 73
Query: 80 YQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGN 139
++ A P+V PFV+ Q + + + ++ + G
Sbjct: 74 WRQFAQAARANPEVKGEAPFVAAQGMLVRGQALRGVQVRGIDPATEGNVSNIPRQMVSGK 133
Query: 140 VSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRF 199
+S+ G G ++G DLA LG+ GD + +L+P G ++P G R + +TV+G+F
Sbjct: 134 LSDLVAGGFGAVLGSDLADGLGVKTGDTVLMLAPQGSISPAGFAPRMRQFTVVGIFSSGH 193
Query: 200 PDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQ 259
+YD+ +V++ ++A F G+ + V D + + ++L V+ DW +
Sbjct: 194 YEYDSTLVFIDDEDAAKVFRESGTA-GVRLRVADMQRAPEVAAELTKVLPPYVMAADWSR 252
Query: 260 RYQIFFSCYES 270
+ +F+ ++
Sbjct: 253 NNRTWFAAVQT 263
>gi|167032703|ref|YP_001667934.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas putida GB-1]
gi|166859191|gb|ABY97598.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Pseudomonas putida GB-1]
Length = 416
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 70/268 (26%), Positives = 120/268 (44%), Gaps = 3/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RY + R+N F+S S S IG+ +GV+ +IVV+SVMNGF +M RVL
Sbjct: 1 MFRPLFAFIGTRYTRAKRRNHFVSFISLTSMIGLALGVVVMIVVLSVMNGFDHEMRTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H + + P+ D+ +A ++ P V+ V PF Q ++ +L
Sbjct: 61 GMIPHATL-ESGQPIADWPALAQQVKQNPQVVAVAPFTQMQGLLTHDGKVQKVLLNGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G + G++IG A LG++IGDK+ ++P VTP GM
Sbjct: 120 AREREVSIIDNFVLQGRLDQLAPGEWGIMIGDKAAAKLGVAIGDKLTFVAPEVSVTPAGM 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLENAVSGIEVFVKDPDAIEKTH 241
R K +TV+G F + + D + ++ + + V G+ + D +
Sbjct: 180 FPRMKRFTVVGTFHVGAGEIDGYLGLTNISDLSRLHRWKPDQVQGLRLKFDDLFQAPRVA 239
Query: 242 ENIVRILGN-GVVVIDWQQRYQIFFSCY 268
+I + LG+ DW + + +
Sbjct: 240 WSIAQQLGDQEFYSRDWTRTHGNLYQAI 267
>gi|319426234|gb|ADV54308.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella putrefaciens 200]
Length = 410
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 65/271 (23%), Positives = 111/271 (40%), Gaps = 5/271 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ V +RY + + NAF S + + G+ +GV ALIVV SVMNG + +R+L
Sbjct: 1 MNLGIPFYVGYRYWRARKANAFASFITLFAVSGIFLGVAALIVVSSVMNGLEGQLKQRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G + PL D+ AN L +P V V P VS QA V ++ + +
Sbjct: 61 GAVP-QLTVYTSAPLNDWTEQANVLKALPGVQGVTPSVSTQAMVQSAANIRAVQVFGVFP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G +I+G +LAR L ++ GD + +LS G V
Sbjct: 120 ELAAKLSVIAQHTYSGAFDELVAGQYKIILGSELARQLKVNPGDTVRLLSGDGVVYSPFG 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTH 241
+ S+ ++ D G+ Y+ Q+A+ + + + +++ DP +
Sbjct: 180 PVPSQRKFLVSGIFEMGSQVDAGVAYIHYQDAKRLMRQPSEAIDQLRLYLDDPFSAPALS 239
Query: 242 ENIVRILGNGVV---VIDWQQRYQIFFSCYE 269
+ IL + DW+ Y F +
Sbjct: 240 PKVQDILLKQHIEATTSDWRDTYGHLFGAVK 270
>gi|148548794|ref|YP_001268896.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas putida F1]
gi|148512852|gb|ABQ79712.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Pseudomonas putida F1]
Length = 416
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 71/268 (26%), Positives = 120/268 (44%), Gaps = 3/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RY + R+N F+S S S IG+ +GV+ +IVV+SVMNGF +M RVL
Sbjct: 1 MFRPLFAFIGTRYTRAKRRNHFVSFISLTSMIGLALGVVVMIVVLSVMNGFDHEMRTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H + + P+ D+Q +A ++ P V+ V PF Q ++ +L
Sbjct: 61 GMIPHATL-ESGQPIADWQALAQQVKQNPQVVAVAPFTQMQGLLTHDGKVQKVLLNGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G + G++IG A LG++IGDK+ ++P VTP GM
Sbjct: 120 AREREVSIIDNFVLQGRLDQLAPGEWGIMIGDKAAAKLGVAIGDKLTFVAPEVSVTPAGM 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLENAVSGIEVFVKDPDAIEKTH 241
R K +TV+G F + + D + ++ + + V G+ + D +
Sbjct: 180 FPRMKRFTVVGTFHVGAGEIDGYLGLTNISDLSRLHRWKPDQVQGLRLKFDDLFQAPRVA 239
Query: 242 ENIVRILG-NGVVVIDWQQRYQIFFSCY 268
+I + LG DW + + +
Sbjct: 240 WSIAQQLGEQEFYSRDWTRTHGNLYQAI 267
>gi|71083601|ref|YP_266320.1| ABC transporter [Candidatus Pelagibacter ubique HTCC1062]
gi|91761978|ref|ZP_01263943.1| ABC transporter [Candidatus Pelagibacter ubique HTCC1002]
gi|71062714|gb|AAZ21717.1| ABC transporter [Candidatus Pelagibacter ubique HTCC1062]
gi|91717780|gb|EAS84430.1| ABC transporter [Candidatus Pelagibacter ubique HTCC1002]
Length = 410
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 72/267 (26%), Positives = 133/267 (49%), Gaps = 5/267 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ S E + RYL + +K+ F++I S SFIG+ +GV LI+VMSVMNGFR ++I +++
Sbjct: 1 MISALEKEITLRYLKTRKKDGFLNIISIFSFIGISLGVAVLIIVMSVMNGFRSELINKIV 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G N HV ++ + + + L I + + + + + G+++RG S
Sbjct: 61 GFNAHVTVKPYETSINLEKLNSENLKLISKELILS---NSGEAIVISKNYTKGLILRGYS 117
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+F L ++ + IGK+L+ NL +S+GDK++I+SP G T +G
Sbjct: 118 RENFLKLDVVKKGNLIGK-SNQLTKNSISIGKELSFNLDLSVGDKVSIMSPVGIETIIGS 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R +++ + +F D+D + +++L+ + +F+ + +E+++ P IE+
Sbjct: 177 LPRQETFIIRSIFDSGLADFDANIAFINLETLENFFSFKKEDRNLEIYLNKPSNIEEAKN 236
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I I N V W FS +
Sbjct: 237 KIQEIFKNEF-VYSWADMNSSLFSALK 262
>gi|218689068|ref|YP_002397280.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli ED1a]
gi|218426632|emb|CAR07460.1| outer membrane-specific lipoprotein transporter subunit ; membrane
component of ABC superfamily [Escherichia coli ED1a]
Length = 399
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 101/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q + L S S + +
Sbjct: 61 GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVA----PVTTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ VI+G+ LA LG++ GD+I ++ P
Sbjct: 117 IDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + +++++A ++G +++ +P ++
Sbjct: 177 RIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW+ R F
Sbjct: 237 ---QQKLPEGSKWQDWRDRKGELFQAV 260
>gi|330986254|gb|EGH84357.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. lachrymans str. M301315]
Length = 416
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 75/268 (27%), Positives = 122/268 (45%), Gaps = 3/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RY + R+N F+S S S IG+ +GV+ +IVV+SVMNGF +M RVL
Sbjct: 1 MFRPLFVFIGTRYTRAKRRNHFVSFISLTSMIGLALGVVVMIVVLSVMNGFDHEMRTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I + P+ D++ +A ++ P V+ V PF Q ++ +L
Sbjct: 61 GMVPHATI-ESADPITDWRGLAAKVQENPQVLAVAPFTQMQGLLTHDGKVQKVLLNGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G + + G++IG A LG+ +GDK+ ++P VTP GM
Sbjct: 120 AEERKVSIIDHFIKQGQLDSLSPGSFGIMIGDKAAAKLGVVVGDKLTFVAPEVTVTPAGM 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLENAVSGIEVFVKDPDAIEKTH 241
R K + V G+F + + D + +L + N V G+ + D A +T
Sbjct: 180 FPRMKRFEVTGIFHVGAGEIDGFLGLTNLDDLARLHRWKPNQVQGLRLKFDDLFAAPRTS 239
Query: 242 ENIVRILG-NGVVVIDWQQRYQIFFSCY 268
I + LG N DW + + +
Sbjct: 240 WEIAQKLGENNFYSRDWTRTHGNLYQAI 267
>gi|254475141|ref|ZP_05088527.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Ruegeria sp. R11]
gi|214029384|gb|EEB70219.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Ruegeria sp. R11]
Length = 430
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 76/276 (27%), Positives = 119/276 (43%), Gaps = 10/276 (3%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FSRFE ++AWRYL + R +S ++IS IG+ + V ALI ++V GFR + + +LG
Sbjct: 7 FSRFEWLIAWRYLRARRAEGGVSTMTWISLIGIALAVFALIATLAVRTGFRSEFVGTILG 66
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
N HV + + D+ + + L + S
Sbjct: 67 ANAHVTLYSHGTVTDQGRIDRKLTDYDALAARAAEVPGVIRTAPLIKGQVMASLQQRNSG 126
Query: 124 SDFSYLQNSFSRFYGN-------VSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
+ + R + + +GV IG +AR LG+ IGD+I ++SP G
Sbjct: 127 VEVFGISAENIRTIPGVAESEQAIGDLDRFEEGVAIGSGVARELGVQIGDRIKLISPNGV 186
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
T G R +Y V+ +F D D +YM EAQ YFN E +EV V+DP+
Sbjct: 187 KTAFGTSPRVNAYEVVYIFTAGRYDIDRTRLYMPFAEAQSYFNREGFADEVEVIVEDPEN 246
Query: 237 IEKTHENIVRI---LGNGVVVIDWQQRYQIFFSCYE 269
+E+ ++ + N + V W+ F E
Sbjct: 247 VERLVLPLLSATGEISNAIGVWTWRDASGGFLRALE 282
>gi|300928329|ref|ZP_07143864.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 187-1]
gi|300463661|gb|EFK27154.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 187-1]
Length = 399
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 101/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q + L S S + +
Sbjct: 61 GLMPQAILYSEHGSLNPQQLPETAVKLDGVNRVA----PITTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ VI+G+ LA LG++ GD+I ++ P
Sbjct: 117 IDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + +++++A ++G +++ +P ++
Sbjct: 177 RIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW+ R F
Sbjct: 237 ---QQKLPEGSKWQDWRDRKGELFQAV 260
>gi|323190468|gb|EFZ75742.1| lipoprotein-releasing system transmembrane protein lolC
[Escherichia coli RN587/1]
Length = 399
Score = 125 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 102/267 (38%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q + L S S + +
Sbjct: 61 GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVA----PITTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ VI+G+ LA LG++ GD+I ++ P
Sbjct: 117 IDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + +++++A ++G +++ +P ++
Sbjct: 177 RIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L +G DW+ R F
Sbjct: 237 ---QQKLPDGSKWQDWRDRKGELFQAV 260
>gi|304413563|ref|ZP_07395036.1| membrane component LolC of outer membrane-specific lipoprotein
transporter [Candidatus Regiella insecticola LSR1]
gi|304284406|gb|EFL92799.1| membrane component LolC of outer membrane-specific lipoprotein
transporter [Candidatus Regiella insecticola LSR1]
Length = 400
Score = 125 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 59/267 (22%), Positives = 103/267 (38%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + RYL N F S++S IG+ +GVMAL++V+SVMNGF D+ +L
Sbjct: 1 MHQPISLFIGLRYLRGRTSNGFGRFVSWLSTIGITLGVMALVLVLSVMNGFERDLQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ V+I K L + A L + V V L S + +
Sbjct: 61 GLMPQVLITTKQGSLNPNEISAATLQGL---QGVTNIVPLTTAEVVLQSNHHVGVAVMLG 117
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
Y + + +I+G LA LG+ GD + ++ P
Sbjct: 118 IDPQQYEPLTQFLVNADKEVLQPGKYNLILGGRLAEQLGVRQGDTLRLMVPNASQFTPLG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
I S+ + + + D + ++ Q+A + ++G +F+ P A++
Sbjct: 178 RIPSQRLFNVSGIFVADSEVDEYQLLLNQQDASRLMHYAPGNITGWRLFLAHPLAVDSLK 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G + DW+ R F
Sbjct: 238 N---QPLPAGTIWKDWRSRKGELFQAV 261
>gi|283784909|ref|YP_003364774.1| lipoprotein-releasing system transmembrane protein [Citrobacter
rodentium ICC168]
gi|282948363|emb|CBG87949.1| lipoprotein-releasing system transmembrane protein [Citrobacter
rodentium ICC168]
Length = 399
Score = 125 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 51/267 (19%), Positives = 102/267 (38%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q + L S S + +
Sbjct: 61 GLMPQAILSAEHGSLNPRQVPEKAVQLNGVNRIA----PLTTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ VI+G+ LA LG+S GD+I ++ P
Sbjct: 117 IDPAQKDPLTPYLVNVKQTDLQPGKYNVILGEQLAGQLGVSRGDQIRVMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ + + D + ++Q+A ++G +++ +P ++
Sbjct: 177 RLPSQRLFTVIGTFAANSEVDGYQMLTNIQDASRLMRYPAGNITGWRLWLNEPLKVDTLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L GV DW++R F
Sbjct: 237 ---QQTLPEGVKWQDWRERKGELFQAV 260
>gi|190571458|ref|YP_001975816.1| lipoprotein releasing system transmembrane protein lolc [Wolbachia
endosymbiont of Culex quinquefasciatus Pel]
gi|213018859|ref|ZP_03334667.1| lipoprotein releasing system transmembrane protein lolc [Wolbachia
endosymbiont of Culex quinquefasciatus JHB]
gi|190357730|emb|CAQ55180.1| lipoprotein releasing system transmembrane protein lolc [Wolbachia
endosymbiont of Culex quinquefasciatus Pel]
gi|212995810|gb|EEB56450.1| lipoprotein releasing system transmembrane protein lolc [Wolbachia
endosymbiont of Culex quinquefasciatus JHB]
Length = 409
Score = 125 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 86/268 (32%), Positives = 129/268 (48%), Gaps = 6/268 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ FE +A RYL + F SI + S IG+ +GV LIVVMSVMNGFR ++ VL
Sbjct: 1 MSIAFEFTMAIRYLRAKNSR-FCSIMALFSIIGIALGVATLIVVMSVMNGFRAKLLDSVL 59
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
GINGH+ + DY + ++ IP V+K + Q V+ + V
Sbjct: 60 GINGHINVYFDRSINSDYHAVLKSIEKIPGVLKATSMTNDQVIVA---ANSGIVGSVVRG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S L N+ + + N +G+IIG LA L I GD I ++SP G G
Sbjct: 117 VSTKDLLNNTIVKNNVIMGNVEKFDEGIIIGARLAEALNIDYGDNIMLISPEGFDALSGE 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ K Y V+ +F M +YDN ++YM ++ A+ +FN ++ V IEVFV D K
Sbjct: 177 IPKMKEYKVVAIFDMGMFEYDNTLMYMPIKSAKAFFNYKDNVRNIEVFVDDIAMANKLAN 236
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYES 270
I + G+ WQ + + + ++
Sbjct: 237 AIAKE--TGMRAESWQSQQSHYVNALKT 262
>gi|66045145|ref|YP_234986.1| hypothetical protein Psyr_1904 [Pseudomonas syringae pv. syringae
B728a]
gi|289679731|ref|ZP_06500621.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. syringae FF5]
gi|63255852|gb|AAY36948.1| Protein of unknown function DUF214 [Pseudomonas syringae pv.
syringae B728a]
gi|330897613|gb|EGH29032.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. japonica str. M301072PT]
Length = 416
Score = 125 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 76/268 (28%), Positives = 122/268 (45%), Gaps = 3/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RY + R+N F+S S S IG+ +GV+ +IVV+SVMNGF +M RVL
Sbjct: 1 MFRPLFVFIGTRYTRAKRRNHFVSFISLTSMIGLALGVVVMIVVLSVMNGFDHEMRTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I + P+ D++ +A ++ P V+ V PF Q ++ +L
Sbjct: 61 GMVPHATI-ESADPITDWRGLAAKVQENPQVLAVAPFTQMQGLLTHDGKVQKVLLNGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G + + G++IG A LG+ IGDK+ ++P VTP GM
Sbjct: 120 LEERKVSIIDHFIKQGQLDSLSPGSFGIMIGDKAAAKLGVGIGDKLTFVAPEVTVTPAGM 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLENAVSGIEVFVKDPDAIEKTH 241
R K + V G+F + + D + +L + N V G+ + D A +T
Sbjct: 180 FPRMKRFEVTGIFHVGAGEIDGFLGLTNLDDLGRLHRWKPNQVQGLRLKFDDLFAAPRTS 239
Query: 242 ENIVRILG-NGVVVIDWQQRYQIFFSCY 268
I + LG N DW + + +
Sbjct: 240 WEIAQKLGENNFYSRDWTRTHGNLYQAI 267
>gi|215486327|ref|YP_002328758.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli O127:H6 str. E2348/69]
gi|312968805|ref|ZP_07783012.1| lipo-releasing system transmembrane protein lolC [Escherichia coli
2362-75]
gi|215264399|emb|CAS08756.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli O127:H6 str. E2348/69]
gi|312286207|gb|EFR14120.1| lipo-releasing system transmembrane protein lolC [Escherichia coli
2362-75]
Length = 399
Score = 125 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 101/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q + L S S + +
Sbjct: 61 GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVA----PITTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ VI+G+ LA LG++ GD+I ++ P
Sbjct: 117 IDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + +++++A ++G +++ +P ++
Sbjct: 177 RIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSIS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW+ R F
Sbjct: 237 ---QQKLPEGSKWQDWRDRKGELFQAV 260
>gi|33601281|ref|NP_888841.1| lipoprotein releasing system transmembrane protein [Bordetella
bronchiseptica RB50]
gi|33575716|emb|CAE32794.1| lipoprotein releasing system transmembrane protein [Bordetella
bronchiseptica RB50]
Length = 410
Score = 125 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 64/251 (25%), Positives = 120/251 (47%), Gaps = 5/251 (1%)
Query: 24 FISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQ----KYYPLVD 79
FIS + S G+ +GV ALIVV+SVMNGF++++ R+L + H+ + L
Sbjct: 14 FISFIAATSMAGIALGVAALIVVLSVMNGFQKEVRDRMLSVLPHIELYIPGAAPERVLQQ 73
Query: 80 YQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGN 139
++ A P+V PFV+ Q + + + ++ + G
Sbjct: 74 WRQFAQAARANPEVKGEAPFVAAQGMLVRGQALRGVQVRGIDPATEGNVSDIPRQMVSGK 133
Query: 140 VSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRF 199
+S+ G G ++G DLA LG+ GD + +L+P G ++P G R + +TV+G+F
Sbjct: 134 LSDLVAGGFGAVLGSDLADGLGVKTGDTVLMLAPQGSISPAGFAPRMRQFTVVGIFSSGH 193
Query: 200 PDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQ 259
+YD+ +V++ ++A F G+ + V D + + ++L V+ DW +
Sbjct: 194 YEYDSTLVFIDDEDAAKVFRESGTA-GVRLRVADMQRAPEVAAELTKVLPPYVMAADWSR 252
Query: 260 RYQIFFSCYES 270
+ +F+ ++
Sbjct: 253 NNRTWFAAVQT 263
>gi|289624086|ref|ZP_06457040.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. aesculi str. NCPPB3681]
gi|289648578|ref|ZP_06479921.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. aesculi str. 2250]
Length = 416
Score = 125 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 75/268 (27%), Positives = 121/268 (45%), Gaps = 3/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RY + R+N F+S S S IG+ +GV+ +IVV+SVMNGF +M RVL
Sbjct: 1 MFRPLFVFIGTRYTRAKRRNHFVSFISLTSMIGLALGVVVMIVVLSVMNGFDHEMRTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I + P+ D+ +A ++ P V+ V PF Q ++ +L
Sbjct: 61 GMVPHATI-ESADPITDWCGLAAKVQENPQVLAVAPFTQMQGLLTHDGKVQKVLLNGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G + + G++IG A LG+ +GDK+ ++P VTP GM
Sbjct: 120 AEERKVSIIDHFIKQGQLDSLSPGSFGIMIGDKAAAKLGVVVGDKLTFVAPEVTVTPAGM 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLENAVSGIEVFVKDPDAIEKTH 241
R K + V G+F + + D + +L + N V G+ + D A +T
Sbjct: 180 FPRMKRFEVTGIFHVGAGEIDGFLGLTNLDDLARLHRWKPNQVQGLRLKFDDLFAAPRTS 239
Query: 242 ENIVRILG-NGVVVIDWQQRYQIFFSCY 268
I + LG N DW + + +
Sbjct: 240 WEIAQKLGENNFYSRDWTRTHGNLYQAI 267
>gi|320179182|gb|EFW54140.1| Lipoprotein releasing system transmembrane protein LolC [Shigella
boydii ATCC 9905]
Length = 399
Score = 125 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 101/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q + L S S + +
Sbjct: 61 GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVA----PITTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ VI+G+ LA LG++ GD+I ++ P
Sbjct: 117 IDSAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRMMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + +++++A ++G +++ +P ++
Sbjct: 177 RIPSQRLFNVIGTFAANSEVDGNEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW+ R F
Sbjct: 237 ---QQKLPEGSKWQDWRDRKGELFQAV 260
>gi|83949528|ref|ZP_00958261.1| lipoprotein releasing system transmembrane protein LolE
[Roseovarius nubinhibens ISM]
gi|83837427|gb|EAP76723.1| lipoprotein releasing system transmembrane protein LolE
[Roseovarius nubinhibens ISM]
Length = 416
Score = 125 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 78/269 (28%), Positives = 128/269 (47%), Gaps = 12/269 (4%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
++AWRYL + R +S+ ++IS IG+ + V ALIV ++V +GFR + + +LG N HV
Sbjct: 1 MIAWRYLRAKRAEGGVSVMTWISLIGITLAVFALIVTLAVRSGFRAEFVDTILGSNAHVT 60
Query: 70 IQ----------QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
I + L DY+ +A R+ +P V +V P V GQ + + +
Sbjct: 61 IYSAGEVDAVTGRIDRTLQDYEEMAARVREVPGVTRVAPLVRGQLLANVQNRNAGVEVFG 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + + + F +G+ IG +AR LG+++GDK+ I+ P G T
Sbjct: 121 ITKENLKTIPRIANPETSLGEIEAF--DQGIAIGSGVARELGVTVGDKVKIILPGGVKTA 178
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
G R K+Y V +F D D VY+ EAQ +FN E +EV V +PD ++
Sbjct: 179 FGSSPRVKAYDVTYVFSAGRYDIDRTRVYLPFAEAQEFFNREGVADELEVMVAEPDHVDA 238
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCY 268
E ++ G ++ W+ + F
Sbjct: 239 MTEALIAAAGERALLWTWRDASKSFLDAL 267
>gi|71734277|ref|YP_274090.1| lipoprotein releasing system transmembrane protein LolC
[Pseudomonas syringae pv. phaseolicola 1448A]
gi|257484405|ref|ZP_05638446.1| lipoprotein releasing system transmembrane protein LolC
[Pseudomonas syringae pv. tabaci ATCC 11528]
gi|71554830|gb|AAZ34041.1| lipoprotein releasing system transmembrane protein LolC
[Pseudomonas syringae pv. phaseolicola 1448A]
gi|320324795|gb|EFW80867.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. glycinea str. B076]
gi|320329161|gb|EFW85158.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. glycinea str. race 4]
gi|330881532|gb|EGH15681.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. glycinea str. race 4]
gi|330889114|gb|EGH21775.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. mori str. 301020]
gi|331013183|gb|EGH93239.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 416
Score = 125 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 75/268 (27%), Positives = 122/268 (45%), Gaps = 3/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RY + R+N F+S S S IG+ +GV+ +IVV+SVMNGF +M RVL
Sbjct: 1 MFRPLFVFIGTRYTRAKRRNHFVSFISLTSMIGLALGVVVMIVVLSVMNGFDHEMRTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I + P+ D++ +A ++ P V+ V PF Q ++ +L
Sbjct: 61 GMVPHATI-ESADPITDWRGLAAKVQENPQVLAVAPFTQMQGLLTHDGKVQKVLLNGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G + + G++IG A LG+ +GDK+ ++P VTP GM
Sbjct: 120 AEERKVSIIDHFIKQGQLDSLSPGSFGIMIGDKAAAKLGVVVGDKLTFVAPEVTVTPAGM 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLENAVSGIEVFVKDPDAIEKTH 241
R K + V G+F + + D + +L + N V G+ + D A +T
Sbjct: 180 FPRMKRFEVTGIFHVGAGEIDGFLGLTNLDDLARLHRWKPNQVQGLRLKFDDLFAAPRTS 239
Query: 242 ENIVRILG-NGVVVIDWQQRYQIFFSCY 268
I + LG N DW + + +
Sbjct: 240 WEIAQKLGENNFYSRDWTRTHGNLYQAI 267
>gi|114769538|ref|ZP_01447164.1| ABC lipoprotein efflux transporter, inner membrane subunit, LolE
[alpha proteobacterium HTCC2255]
gi|114550455|gb|EAU53336.1| ABC lipoprotein efflux transporter, inner membrane subunit, LolE
[alpha proteobacterium HTCC2255]
Length = 428
Score = 125 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 79/275 (28%), Positives = 127/275 (46%), Gaps = 11/275 (4%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+R+E ++A RYL S R + IS ++IS IG+ + V ALI ++V GFR + + +LG
Sbjct: 8 FNRYEWMIAIRYLRSKRSDGGISSMTWISLIGISLAVFALIATLAVRTGFRAEFVNTILG 67
Query: 64 INGHVVIQQKYYPLV---------DYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
N H I Y +Y I N ++ I V+ V P V GQ +
Sbjct: 68 ANAHASIYNSPYINNDGVVVSGFANYNQIKNNIENIEGVLSVSPVVKGQVMANANGQNQG 127
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ + F KG+ IG +AR+LG+ +GD + ++SP
Sbjct: 128 VEVFGETLIDIKKLPLIMSPELSYGSIDSF--EKGIAIGSGIARSLGLKLGDTLTLISPD 185
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G T G R + V+ +F++ D DN +YM L +AQ+YFN E V EV V +P
Sbjct: 186 GVKTAFGTSPRINGFEVVYIFQVGRYDIDNTRIYMPLADAQIYFNSEGRVDEFEVIVNEP 245
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I+ ++ + N ++ W+ F + +
Sbjct: 246 EDIDDLKILLLSSMSNSALIWTWRDANGGFLNALQ 280
>gi|238789092|ref|ZP_04632881.1| Lipoprotein-releasing system transmembrane protein lolC [Yersinia
frederiksenii ATCC 33641]
gi|238722856|gb|EEQ14507.1| Lipoprotein-releasing system transmembrane protein lolC [Yersinia
frederiksenii ATCC 33641]
Length = 400
Score = 125 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 55/267 (20%), Positives = 102/267 (38%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMALI V+SVMNGF D+ +L
Sbjct: 1 MYQPVALFIGLRYMRGRASDRFGRFVSWLSTIGITLGVMALITVLSVMNGFERDLQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ +I L + A+ L + V V L S + +
Sbjct: 61 GLMPQALITTPQGSLDPNKIPASALKSL---TGVTDIVPLTTADVVLQSARNLAAGVMLG 117
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + + +I+G+ LA LG+ G+ + ++ P
Sbjct: 118 IDPERHEPLADYLVNVKLKDLQPGSYNMILGEKLAGQLGVKRGETLRLMVPSASQFTPMG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + ++ Q+A ++G +F+ P A++
Sbjct: 178 RIPSQRLFNIIGTFAADSEVDGYQMLVNQQDASRLMRYPAGNITGWRLFLSQPLAVDSLS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G V DW+ R F
Sbjct: 238 ---QQTLPEGTVWKDWRDRKGELFQAV 261
>gi|332102048|gb|EGJ05394.1| outer membrane-specific lipoprotein transporter subunit LolC
[Shigella sp. D9]
Length = 416
Score = 125 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 101/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 18 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 77
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q + L S S + +
Sbjct: 78 GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVA----PITTGDVVLQSARSVAVGVMLG 133
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ VI+G+ LA LG++ GD+I ++ P
Sbjct: 134 IDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRMMVPSASQFTPMG 193
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + +++++A ++G +++ +P ++
Sbjct: 194 RIPSQRLFNVIGTFAANSEVDGNEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 253
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW+ R F
Sbjct: 254 ---QQKLPEGSKWQDWRDRKGELFQAV 277
>gi|330973220|gb|EGH73286.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. aceris str. M302273PT]
Length = 416
Score = 125 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 76/268 (28%), Positives = 122/268 (45%), Gaps = 3/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RY + R+N F+S S S IG+ +GV+ +IVV+SVMNGF +M RVL
Sbjct: 1 MFRPLFVFIGTRYTRAKRRNHFVSFISLTSMIGLALGVVVMIVVLSVMNGFDHEMRTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I + P+ D++ +A ++ P V+ V PF Q ++ +L
Sbjct: 61 GMVPHATI-ESADPITDWRGLAAKVQENPQVLAVAPFTQMQGLLTHDGKVQKVLLNGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G + + G++IG A LG+ IGDK+ ++P VTP GM
Sbjct: 120 LEERKVSIIDHFIKQGQLDSLSPGSFGIMIGDKAAAKLGVGIGDKLTFVAPEVTVTPAGM 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLENAVSGIEVFVKDPDAIEKTH 241
R K + V G+F + + D + +L + N V G+ + D A +T
Sbjct: 180 FPRMKRFEVTGIFHVGAGEIDGFLGLTNLDDLGRLHRWKPNQVQGLRLKFDDLFAAPRTS 239
Query: 242 ENIVRILG-NGVVVIDWQQRYQIFFSCY 268
I + LG N DW + + +
Sbjct: 240 WEIAQKLGENNFYSRDWTRTHGNLYQAI 267
>gi|302184819|ref|ZP_07261492.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. syringae 642]
Length = 416
Score = 125 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 76/268 (28%), Positives = 122/268 (45%), Gaps = 3/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RY + R+N F+S S S IG+ +GV+ +IVV+SVMNGF +M RVL
Sbjct: 1 MFRPLFVFIGTRYTRAKRRNHFVSFISLTSMIGLALGVVVMIVVLSVMNGFDHEMRTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I + P+ D++ +A ++ P V+ V PF Q ++ +L
Sbjct: 61 GMVPHATI-ESADPITDWRGLAAKVQENPQVLAVAPFTQMQGLLTHDGKVQKVLLNGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G + + G++IG A LG+ IGDK+ ++P VTP GM
Sbjct: 120 TEERKVSIIDHFIKQGRLDSLSPGSFGIMIGDKAAAKLGVGIGDKLTFVAPEVTVTPAGM 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLENAVSGIEVFVKDPDAIEKTH 241
R K + V G+F + + D + +L + N V G+ + D A +T
Sbjct: 180 FPRMKRFEVTGIFHVGAGEIDGFLGLTNLDDLGRLHRWKPNQVQGLRLKFDDLFAAPRTS 239
Query: 242 ENIVRILG-NGVVVIDWQQRYQIFFSCY 268
I + LG N DW + + +
Sbjct: 240 WEIAQKLGENNFYSRDWTRTHGNLYQAI 267
>gi|114563567|ref|YP_751080.1| lipoprotein releasing system, transmembrane protein, LolC/E family
protein [Shewanella frigidimarina NCIMB 400]
gi|114334860|gb|ABI72242.1| lipoprotein releasing system, transmembrane protein, LolC/E family
protein [Shewanella frigidimarina NCIMB 400]
Length = 414
Score = 125 bits (312), Expect = 8e-27, Method: Composition-based stats.
Identities = 57/274 (20%), Positives = 111/274 (40%), Gaps = 7/274 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ F + +RY + + NAF S +F + G+ +GV ALIVV SVMNG + R+L
Sbjct: 1 MNLGFSFFIGYRYWRARKANAFASFITFFAVSGIFLGVAALIVVSSVMNGLEGQLKNRIL 60
Query: 63 GINGHVV---IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
G + Q + + ++ ++P + QA + S+ + +
Sbjct: 61 GAVPQMTLISDMGFRDWQQSSQSLLADKYLLQNIRGIVPSATTQAMIQSSSNIQAIQMYG 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ S + + S +++G DLAR L + GDK+ +LS G V
Sbjct: 121 VYPELEQSLSSIAAHTYSDAFSTLQAGKYSIVLGTDLARKLDVKAGDKVRVLSGDGVVYS 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIE 238
+ S+ + D+ + Y+ ++A+ + N ++ + V++ DP +
Sbjct: 181 PMGPVPSQRKFTVAGVFEMGSQVDSSVAYVHYKDARKLMRQDSNTINELRVYLNDPFSAP 240
Query: 239 KTHENIVRIL---GNGVVVIDWQQRYQIFFSCYE 269
+V + DW+Q + F+ +
Sbjct: 241 ALAPKLVAGFAKQNIDIKTRDWRQDFGHLFAAVK 274
>gi|163737416|ref|ZP_02144833.1| DNA topoisomerase IV subunit B [Phaeobacter gallaeciensis BS107]
gi|161388942|gb|EDQ13294.1| DNA topoisomerase IV subunit B [Phaeobacter gallaeciensis BS107]
Length = 430
Score = 125 bits (312), Expect = 8e-27, Method: Composition-based stats.
Identities = 81/278 (29%), Positives = 130/278 (46%), Gaps = 14/278 (5%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FSRFE ++AWRYL + R +S+ ++IS IG+ + V ALI ++V GFR + + +LG
Sbjct: 7 FSRFEWLIAWRYLRARRAEGGVSVMTWISLIGIALAVFALIATLAVRTGFRSEFVGTILG 66
Query: 64 INGHVVIQQKYYPLVD---------YQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
N HV + Y +A +P VI+ P + GQ S
Sbjct: 67 ANAHVTLYSHGTVTEQGQIDRKLTEYDALAEAAAAVPGVIRTAPLIKGQVMASLRQRSAG 126
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ + + + + S + +GV +G +AR LG+S+GD+I ++SP
Sbjct: 127 VEVFGISAANIATLPGIAQSEAAIG--DLSRFDEGVALGSGVARELGVSVGDRIKLISPN 184
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G T G R +Y V+ +F D D +YM EAQ YFN E IEV V+DP
Sbjct: 185 GVKTAFGTSPRVNAYEVVYIFTAGRYDIDRTRLYMPFAEAQSYFNREGYADEIEVMVEDP 244
Query: 235 DAIEKTHENIVR---ILGNGVVVIDWQQRYQIFFSCYE 269
+ +++ +++ + +G+ V W+ F E
Sbjct: 245 ETVDRMVLPLLQAGDQVTSGIGVWTWRDASGGFLRALE 282
>gi|284920941|emb|CBG34004.1| lipoprotein-releasing system transmembrane protein [Escherichia
coli 042]
Length = 399
Score = 125 bits (312), Expect = 9e-27, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 101/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q + L S S + +
Sbjct: 61 GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVA----PITTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ VI+G+ LA LG++ GD+I ++ P
Sbjct: 117 IDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + +++++A ++G +++ +P ++
Sbjct: 177 RIPSQRLFNVIGTFAANSEVDGYELLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW+ R F
Sbjct: 237 ---QQKLPEGSKWQDWRDRKGELFQAV 260
>gi|146311287|ref|YP_001176361.1| outer membrane-specific lipoprotein transporter subunit LolC
[Enterobacter sp. 638]
gi|145318163|gb|ABP60310.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Enterobacter sp. 638]
Length = 399
Score = 125 bits (312), Expect = 9e-27, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 102/267 (38%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ V+ + Q + + L S S + +
Sbjct: 61 GLMPQAVLSSTNGSINPQQLPESAVKLQGVNRIA----PLTTGDVVLQSARSVSVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ VI+G+ LA LG++ GD++ ++ P
Sbjct: 117 IDPAQKDPLTPYLVNVKQTDLAPGQYNVILGEQLAGQLGVNRGDQLRVMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ + + D + +++Q+A ++G +++ +P ++
Sbjct: 177 RLPSQRLFNVIGTFAANSEVDGYQMLVNIQDASRLMRYPLGNITGWRLWLNEPLKVDVLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
E + L G DW++R F
Sbjct: 237 E---QKLPEGTKWQDWRERKGELFQAV 260
>gi|82544416|ref|YP_408363.1| outer membrane-specific lipoprotein transporter subunit LolC
[Shigella boydii Sb227]
gi|81245827|gb|ABB66535.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|332094474|gb|EGI99523.1| lipoprotein-releasing system transmembrane protein lolC [Shigella
boydii 3594-74]
Length = 399
Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats.
Identities = 47/267 (17%), Positives = 100/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ + Q + L S S + +
Sbjct: 61 GLMPQAILSSEHGSINPQQLPETAVKLDGVNRVA----PITTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ VI+G+ LA LG++ GD+I ++ P
Sbjct: 117 IDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRMMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + +++++A ++G +++ +P ++
Sbjct: 177 RIPSQRLFNVIGTFAANSEVDGNEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L DW+ R F
Sbjct: 237 ---QQKLPEDSKWQDWRDRKGELFQAV 260
>gi|119945861|ref|YP_943541.1| lipoprotein releasing system, transmembrane protein, LolC/E family
protein [Psychromonas ingrahamii 37]
gi|119864465|gb|ABM03942.1| lipoprotein releasing system, transmembrane protein, LolC/E family
protein [Psychromonas ingrahamii 37]
Length = 413
Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 102/267 (38%), Gaps = 3/267 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + KN F+S S S +G+ +GV ALIV +S MNGF + + ++L
Sbjct: 1 MFRPLLIFIGLRYSKAKHKNKFVSFISMASILGIALGVTALIVGLSAMNGFEKALRDQML 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H ++ + ++ P VI P++ + + +
Sbjct: 61 AVIPHAELETVNGSFENLDSSLKQVRHHPGVIAASPYIMLNGLLQKDDQIKALQIRAIAP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S+ G + +++GK +A L + IGD + ++ P +
Sbjct: 121 KSERDVTAVEHYIKGGGWELLKTGQRSIVLGKSVALKLAMKIGDSLTLILPQEGGQQLKS 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ K V DN + +M + +A+ L ++ +GI V D +
Sbjct: 181 PRKIKLTLVG--LFEMGGQLDNALGFMHIDDAKQILGL-DSANGIAFKVADILDAQTLAR 237
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ L + + + W + +
Sbjct: 238 DVGYSLNDYLYIKSWITSQGYLYQDIQ 264
>gi|218548646|ref|YP_002382437.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia fergusonii ATCC 35469]
gi|218356187|emb|CAQ88804.1| outer membrane-specific lipoprotein transporter subunit ; membrane
component of ABC superfamily [Escherichia fergusonii
ATCC 35469]
gi|324113533|gb|EGC07508.1| LolC/E family protein lipoprotein releasing system [Escherichia
fergusonii B253]
gi|325497057|gb|EGC94916.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia fergusonii ECD227]
Length = 399
Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 101/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q + L S S + +
Sbjct: 61 GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRIA----PVTTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ VI+G+ LA LG++ GD+I ++ P
Sbjct: 117 IDPAQKDPLTPYLVNVKQADLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + +++++A ++G +++ +P ++
Sbjct: 177 RIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW+ R F
Sbjct: 237 ---QQKLPEGSKWQDWRDRKGELFQAV 260
>gi|15801233|ref|NP_287250.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli O157:H7 EDL933]
gi|15830748|ref|NP_309521.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli O157:H7 str. Sakai]
gi|16129079|ref|NP_415634.1| lipoprotein-releasing system transmembrane protein [Escherichia
coli str. K-12 substr. MG1655]
gi|26247260|ref|NP_753300.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli CFT073]
gi|89107962|ref|AP_001742.1| outer membrane-specific lipoprotein transporter subunit
[Escherichia coli str. K-12 substr. W3110]
gi|91210271|ref|YP_540257.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli UTI89]
gi|110641293|ref|YP_669023.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli 536]
gi|157154974|ref|YP_001462349.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli E24377A]
gi|168751334|ref|ZP_02776356.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli O157:H7 str. EC4113]
gi|168757831|ref|ZP_02782838.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli O157:H7 str. EC4401]
gi|168764887|ref|ZP_02789894.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli O157:H7 str. EC4501]
gi|168771342|ref|ZP_02796349.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli O157:H7 str. EC4486]
gi|168776790|ref|ZP_02801797.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli O157:H7 str. EC4196]
gi|168783486|ref|ZP_02808493.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli O157:H7 str. EC4076]
gi|168790094|ref|ZP_02815101.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli O157:H7 str. EC869]
gi|170080767|ref|YP_001730087.1| outer membrane-specific lipoprotein ABC transporter membrane
protein [Escherichia coli str. K-12 substr. DH10B]
gi|170683814|ref|YP_001744062.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli SMS-3-5]
gi|191173106|ref|ZP_03034639.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli F11]
gi|193070922|ref|ZP_03051853.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli E110019]
gi|194439707|ref|ZP_03071776.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli 101-1]
gi|195938875|ref|ZP_03084257.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli O157:H7 str. EC4024]
gi|208806615|ref|ZP_03248952.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli O157:H7 str. EC4206]
gi|208815996|ref|ZP_03257175.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli O157:H7 str. EC4045]
gi|208822693|ref|ZP_03263012.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli O157:H7 str. EC4042]
gi|209400879|ref|YP_002269961.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli O157:H7 str. EC4115]
gi|217328420|ref|ZP_03444502.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli O157:H7 str. TW14588]
gi|218553693|ref|YP_002386606.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli IAI1]
gi|218557997|ref|YP_002390910.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli S88]
gi|218694649|ref|YP_002402316.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli 55989]
gi|218700382|ref|YP_002408011.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli IAI39]
gi|218704527|ref|YP_002412046.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli UMN026]
gi|227886527|ref|ZP_04004332.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli 83972]
gi|238900370|ref|YP_002926166.1| outer membrane-specific lipoprotein transporter subunit
[Escherichia coli BW2952]
gi|253773861|ref|YP_003036692.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254161222|ref|YP_003044330.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli B str. REL606]
gi|254792499|ref|YP_003077336.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli O157:H7 str. TW14359]
gi|260854599|ref|YP_003228490.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli O26:H11 str. 11368]
gi|260867478|ref|YP_003233880.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli O111:H- str. 11128]
gi|261226980|ref|ZP_05941261.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli O157:H7 str. FRIK2000]
gi|261256214|ref|ZP_05948747.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli O157:H7 str. FRIK966]
gi|291282136|ref|YP_003498954.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli O55:H7 str. CB9615]
gi|293404405|ref|ZP_06648399.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli FVEC1412]
gi|298380182|ref|ZP_06989787.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli FVEC1302]
gi|300816818|ref|ZP_07097038.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 107-1]
gi|300821103|ref|ZP_07101252.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 119-7]
gi|300896879|ref|ZP_07115369.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 198-1]
gi|300902510|ref|ZP_07120490.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 84-1]
gi|300922645|ref|ZP_07138742.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 182-1]
gi|300938687|ref|ZP_07153411.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 21-1]
gi|300948706|ref|ZP_07162783.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 116-1]
gi|300956218|ref|ZP_07168530.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 175-1]
gi|300974588|ref|ZP_07172649.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 45-1]
gi|300982401|ref|ZP_07176099.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 200-1]
gi|301023327|ref|ZP_07187120.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 69-1]
gi|301029577|ref|ZP_07192655.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 196-1]
gi|301051095|ref|ZP_07197929.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 185-1]
gi|301305645|ref|ZP_07211734.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 124-1]
gi|301328510|ref|ZP_07221576.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 78-1]
gi|301644532|ref|ZP_07244525.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 146-1]
gi|306814034|ref|ZP_07448207.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli NC101]
gi|307137751|ref|ZP_07497107.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli H736]
gi|331641659|ref|ZP_08342794.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli H736]
gi|331646374|ref|ZP_08347477.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli M605]
gi|331652168|ref|ZP_08353187.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli M718]
gi|331657180|ref|ZP_08358142.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli TA206]
gi|331662527|ref|ZP_08363450.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli TA143]
gi|331667516|ref|ZP_08368380.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli TA271]
gi|331682622|ref|ZP_08383241.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli H299]
gi|83287825|sp|P0ADC5|LOLC_ECO57 RecName: Full=Lipoprotein-releasing system transmembrane protein
lolC
gi|83287826|sp|P0ADC4|LOLC_ECOL6 RecName: Full=Lipoprotein-releasing system transmembrane protein
lolC
gi|83287827|sp|P0ADC3|LOLC_ECOLI RecName: Full=Lipoprotein-releasing system transmembrane protein
lolC
gi|12514666|gb|AAG55862.1|AE005321_5 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|26107661|gb|AAN79860.1|AE016759_134 Lipoprotein releasing system transmembrane protein lolC
[Escherichia coli CFT073]
gi|1787360|gb|AAC74200.1| lipoprotein-releasing system transmembrane protein [Escherichia
coli str. K-12 substr. MG1655]
gi|13360958|dbj|BAB34917.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|85674840|dbj|BAA35936.2| outer membrane-specific lipoprotein transporter subunit
[Escherichia coli str. K12 substr. W3110]
gi|91071845|gb|ABE06726.1| lipoprotein releasing system transmembrane protein lolC
[Escherichia coli UTI89]
gi|110342885|gb|ABG69122.1| lipoprotein releasing system transmembrane protein LolC
[Escherichia coli 536]
gi|157077004|gb|ABV16712.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli E24377A]
gi|169888602|gb|ACB02309.1| outer membrane-specific lipoprotein transporter subunit; membrane
component of ABC superfamily [Escherichia coli str. K-12
substr. DH10B]
gi|170521532|gb|ACB19710.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli SMS-3-5]
gi|187767885|gb|EDU31729.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli O157:H7 str. EC4196]
gi|188014596|gb|EDU52718.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli O157:H7 str. EC4113]
gi|188999182|gb|EDU68168.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli O157:H7 str. EC4076]
gi|189355251|gb|EDU73670.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli O157:H7 str. EC4401]
gi|189359850|gb|EDU78269.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli O157:H7 str. EC4486]
gi|189365187|gb|EDU83603.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli O157:H7 str. EC4501]
gi|189370370|gb|EDU88786.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli O157:H7 str. EC869]
gi|190906651|gb|EDV66257.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli F11]
gi|192955776|gb|EDV86248.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli E110019]
gi|194421326|gb|EDX37344.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli 101-1]
gi|208726416|gb|EDZ76017.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli O157:H7 str. EC4206]
gi|208732644|gb|EDZ81332.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli O157:H7 str. EC4045]
gi|208738178|gb|EDZ85861.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli O157:H7 str. EC4042]
gi|209162279|gb|ACI39712.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli O157:H7 str. EC4115]
gi|209772978|gb|ACI84801.1| hypothetical protein ECs1494 [Escherichia coli]
gi|209772980|gb|ACI84802.1| hypothetical protein ECs1494 [Escherichia coli]
gi|209772982|gb|ACI84803.1| hypothetical protein ECs1494 [Escherichia coli]
gi|209772984|gb|ACI84804.1| hypothetical protein ECs1494 [Escherichia coli]
gi|209772986|gb|ACI84805.1| hypothetical protein ECs1494 [Escherichia coli]
gi|217318847|gb|EEC27273.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli O157:H7 str. TW14588]
gi|218351381|emb|CAU97087.1| outer membrane-specific lipoprotein transporter subunit ; membrane
component of ABC superfamily [Escherichia coli 55989]
gi|218360461|emb|CAQ98015.1| outer membrane-specific lipoprotein transporter subunit ; membrane
component of ABC superfamily [Escherichia coli IAI1]
gi|218364766|emb|CAR02456.1| outer membrane-specific lipoprotein transporter subunit ; membrane
component of ABC superfamily [Escherichia coli S88]
gi|218370368|emb|CAR18171.1| outer membrane-specific lipoprotein transporter subunit ; membrane
component of ABC superfamily [Escherichia coli IAI39]
gi|218431624|emb|CAR12503.1| outer membrane-specific lipoprotein transporter subunit ; membrane
component of ABC superfamily [Escherichia coli UMN026]
gi|222032869|emb|CAP75608.1| Lipoprotein-releasing system transmembrane protein lolC
[Escherichia coli LF82]
gi|227836731|gb|EEJ47197.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli 83972]
gi|238861962|gb|ACR63960.1| outer membrane-specific lipoprotein transporter subunit
[Escherichia coli BW2952]
gi|242376918|emb|CAQ31637.1| lolC, subunit of LolCDE ABC lipoprotein transporter [Escherichia
coli BL21(DE3)]
gi|253324905|gb|ACT29507.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253973123|gb|ACT38794.1| outer membrane-specific lipoprotein transporter subunit
[Escherichia coli B str. REL606]
gi|253977337|gb|ACT43007.1| outer membrane-specific lipoprotein transporter subunit
[Escherichia coli BL21(DE3)]
gi|254591899|gb|ACT71260.1| outer membrane-specific lipoprotein transporter subunit; membrane
component of ABC superfamily [Escherichia coli O157:H7
str. TW14359]
gi|257753248|dbj|BAI24750.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli O26:H11 str. 11368]
gi|257763834|dbj|BAI35329.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli O111:H- str. 11128]
gi|260449745|gb|ACX40167.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli DH1]
gi|281178226|dbj|BAI54556.1| conserved hypothetical protein [Escherichia coli SE15]
gi|290762009|gb|ADD55970.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli O55:H7 str. CB9615]
gi|291428991|gb|EFF02016.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli FVEC1412]
gi|294490431|gb|ADE89187.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli IHE3034]
gi|298279880|gb|EFI21388.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli FVEC1302]
gi|299877572|gb|EFI85783.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 196-1]
gi|300297267|gb|EFJ53652.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 185-1]
gi|300307238|gb|EFJ61758.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 200-1]
gi|300316946|gb|EFJ66730.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 175-1]
gi|300359286|gb|EFJ75156.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 198-1]
gi|300397052|gb|EFJ80590.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 69-1]
gi|300405411|gb|EFJ88949.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 84-1]
gi|300410530|gb|EFJ94068.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 45-1]
gi|300420994|gb|EFK04305.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 182-1]
gi|300451800|gb|EFK15420.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 116-1]
gi|300456332|gb|EFK19825.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 21-1]
gi|300526402|gb|EFK47471.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 119-7]
gi|300530592|gb|EFK51654.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 107-1]
gi|300839073|gb|EFK66833.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 124-1]
gi|300845117|gb|EFK72877.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 78-1]
gi|301077114|gb|EFK91920.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 146-1]
gi|305852671|gb|EFM53119.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli NC101]
gi|307553117|gb|ADN45892.1| lipoprotein releasing system transmembrane protein LolC
[Escherichia coli ABU 83972]
gi|307627413|gb|ADN71717.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli UM146]
gi|309701387|emb|CBJ00688.1| lipoprotein-releasing system transmembrane protein [Escherichia
coli ETEC H10407]
gi|312945678|gb|ADR26505.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli O83:H1 str. NRG 857C]
gi|315135748|dbj|BAJ42907.1| outer membrane-specific lipoprotein transporter subunit
[Escherichia coli DH1]
gi|315253016|gb|EFU32984.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 85-1]
gi|315287488|gb|EFU46899.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 110-3]
gi|315291016|gb|EFU50381.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 153-1]
gi|315296621|gb|EFU55916.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 16-3]
gi|315618288|gb|EFU98878.1| lipo-releasing system transmembrane protein lolC [Escherichia coli
3431]
gi|320188123|gb|EFW62788.1| Lipoprotein releasing system transmembrane protein LolC
[Escherichia coli O157:H7 str. EC1212]
gi|320197557|gb|EFW72170.1| Lipoprotein releasing system transmembrane protein LolC
[Escherichia coli WV_060327]
gi|320637568|gb|EFX07368.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli O157:H7 str. G5101]
gi|320643128|gb|EFX12329.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli O157:H- str. 493-89]
gi|320648586|gb|EFX17241.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli O157:H- str. H 2687]
gi|320653900|gb|EFX21974.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli O55:H7 str. 3256-97 TW 07815]
gi|320659381|gb|EFX26950.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli O55:H7 str. USDA 5905]
gi|320664516|gb|EFX31667.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli O157:H7 str. LSU-61]
gi|323156753|gb|EFZ42889.1| lipo-releasing system transmembrane protein lolC [Escherichia coli
EPECa14]
gi|323165626|gb|EFZ51413.1| lipo-releasing system transmembrane protein lolC [Shigella sonnei
53G]
gi|323937856|gb|EGB34120.1| LolC/E family protein lipoprotein releasing system [Escherichia
coli E1520]
gi|323953197|gb|EGB49063.1| LolC/E family protein lipoprotein releasing system [Escherichia
coli H252]
gi|323957942|gb|EGB53654.1| LolC/E family protein lipoprotein releasing system [Escherichia
coli H263]
gi|323962715|gb|EGB58293.1| LolC/E family protein lipoprotein releasing system [Escherichia
coli H489]
gi|323973294|gb|EGB68483.1| LolC/E family protein lipoprotein releasing system [Escherichia
coli TA007]
gi|324005968|gb|EGB75187.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 57-2]
gi|324013207|gb|EGB82426.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli MS 60-1]
gi|326339339|gb|EGD63153.1| Lipoprotein releasing system transmembrane protein LolC
[Escherichia coli O157:H7 str. 1125]
gi|326340420|gb|EGD64223.1| Lipoprotein releasing system transmembrane protein LolC
[Escherichia coli O157:H7 str. 1044]
gi|330910932|gb|EGH39442.1| lipoprotein releasing system transmembrane protein LolC
[Escherichia coli AA86]
gi|331038457|gb|EGI10677.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli H736]
gi|331045126|gb|EGI17253.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli M605]
gi|331050446|gb|EGI22504.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli M718]
gi|331055428|gb|EGI27437.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli TA206]
gi|331060949|gb|EGI32913.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli TA143]
gi|331065101|gb|EGI36996.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli TA271]
gi|331080253|gb|EGI51432.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli H299]
Length = 399
Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 101/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q + L S S + +
Sbjct: 61 GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVA----PITTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ VI+G+ LA LG++ GD+I ++ P
Sbjct: 117 IDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + +++++A ++G +++ +P ++
Sbjct: 177 RIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW+ R F
Sbjct: 237 ---QQKLPEGSKWQDWRDRKGELFQAV 260
>gi|187731599|ref|YP_001880714.1| outer membrane-specific lipoprotein transporter subunit LolC
[Shigella boydii CDC 3083-94]
gi|187428591|gb|ACD07865.1| lipoprotein-releasing system transmembrane protein LolC [Shigella
boydii CDC 3083-94]
gi|320175624|gb|EFW50716.1| Lipoprotein releasing system transmembrane protein LolC [Shigella
dysenteriae CDC 74-1112]
gi|320184243|gb|EFW59057.1| Lipoprotein releasing system transmembrane protein LolC [Shigella
flexneri CDC 796-83]
Length = 399
Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats.
Identities = 48/267 (17%), Positives = 100/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q + L S S + +
Sbjct: 61 GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVA----PITTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ VI+G+ LA LG++ GD+I ++ P
Sbjct: 117 IDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRMMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + +++++A ++G +++ +P ++
Sbjct: 177 RIPSQRLFNVIGTFAANSEVDGNEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L DW+ R F
Sbjct: 237 ---QQKLPEDSKWQDWRDRKGELFQAV 260
>gi|82777271|ref|YP_403620.1| outer membrane-specific lipoprotein transporter subunit LolC
[Shigella dysenteriae Sd197]
gi|309788188|ref|ZP_07682794.1| lipo-releasing system transmembrane protein lolC [Shigella
dysenteriae 1617]
gi|81241419|gb|ABB62129.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|308924040|gb|EFP69541.1| lipo-releasing system transmembrane protein lolC [Shigella
dysenteriae 1617]
Length = 399
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 48/267 (17%), Positives = 100/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q + L S S + +
Sbjct: 61 GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVA----PITTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ VI+G+ LA L ++ GD+I ++ P
Sbjct: 117 IDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLSVNRGDQIRVMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + +++++A ++G +++ +P ++
Sbjct: 177 RIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW+ R F
Sbjct: 237 ---QQKLPEGSKWQDWRDRKGELFQAV 260
>gi|323967057|gb|EGB62483.1| LolC/E family protein lipoprotein releasing system [Escherichia
coli M863]
gi|323976511|gb|EGB71599.1| LolC/E family protein lipoprotein releasing system [Escherichia
coli TW10509]
gi|327253515|gb|EGE65153.1| lipoprotein-releasing system transmembrane protein lolC
[Escherichia coli STEC_7v]
Length = 399
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 101/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q + L S S + +
Sbjct: 61 GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVA----PITTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ VI+G+ LA LG++ GD+I ++ P
Sbjct: 117 IDPAQKDPLTPYLVNVKQADLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + +++++A ++G +++ +P ++
Sbjct: 177 RIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW+ R F
Sbjct: 237 ---QQKLPEGSKWQDWRDRKGELFQAV 260
>gi|74311677|ref|YP_310096.1| outer membrane-specific lipoprotein transporter subunit LolC
[Shigella sonnei Ss046]
gi|73855154|gb|AAZ87861.1| conserved hypothetical protein [Shigella sonnei Ss046]
Length = 399
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 101/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q + L S S + +
Sbjct: 61 GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVA----PITTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ VI+G+ LA LG++ GD+I ++ P
Sbjct: 117 IDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + +++++A ++G +++ +P ++
Sbjct: 177 RIPSQRLFNVIGNFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW+ R F
Sbjct: 237 ---QQKLPEGSKWQDWRDRKGELFQAV 260
>gi|330982238|gb|EGH80341.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 417
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 76/268 (28%), Positives = 122/268 (45%), Gaps = 3/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RY + R+N F+S S S IG+ +GV+ +IVV+SVMNGF +M RVL
Sbjct: 1 MFRPLFVFIGTRYTRAKRRNHFVSFISLTSMIGLALGVVVMIVVLSVMNGFDHEMRTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I + P+ D++ +A ++ P V+ V PF Q ++ +L
Sbjct: 61 GMVPHATI-ESADPITDWRGLAAKVQENPQVLAVAPFTQMQGLLTHDGKVQKVLLNGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G + + G++IG A LG+ IGDK+ ++P VTP GM
Sbjct: 120 LEERKVSIIDHFIKQGQLDSLSPGSFGIMIGDKAAAKLGVGIGDKLTFVAPEVTVTPAGM 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLENAVSGIEVFVKDPDAIEKTH 241
R K + V G+F + + D + +L + N V G+ + D A +T
Sbjct: 180 FPRMKRFEVTGIFHVGAGEIDGFLGLTNLDDLGRLHRWKPNQVQGLRLKFDDLFAAPRTS 239
Query: 242 ENIVRILG-NGVVVIDWQQRYQIFFSCY 268
I + LG N DW + + +
Sbjct: 240 WEIAQKLGENNFYSRDWTRTHGNLYQAI 267
>gi|298486424|ref|ZP_07004485.1| Lipoprotein releasing system transmembrane protein lolC
[Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|298159052|gb|EFI00112.1| Lipoprotein releasing system transmembrane protein lolC
[Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
Length = 416
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 76/268 (28%), Positives = 123/268 (45%), Gaps = 3/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RY + R+N F+S S S IG+ +GV+ +IVV+SVMNGF +M RVL
Sbjct: 1 MFRPLFVFIGTRYTRAKRRNHFVSFISLTSMIGLALGVVVMIVVLSVMNGFDHEMRTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I + P+ D++ +A ++ P V+ V PF Q ++ +L
Sbjct: 61 GMVPHATI-ESADPITDWRGLAAKVQENPQVLAVAPFTQMQGLLTHDGKVQKVLLNGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G + + G++IG A LG+ +GDK+N ++P VTP GM
Sbjct: 120 AEERKVSIIDHFIKQGQLDSLSPGSFGIMIGDKAAAKLGVVVGDKLNFVAPEVTVTPAGM 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLENAVSGIEVFVKDPDAIEKTH 241
R K + V G+F + + D + +L + N V G+ + D A +T
Sbjct: 180 FPRMKRFEVTGIFHVGAGEIDGFLGLTNLDDLARLHRWKPNQVQGLRLKFDDLFAAPRTS 239
Query: 242 ENIVRILG-NGVVVIDWQQRYQIFFSCY 268
I + LG N DW + + +
Sbjct: 240 WEIAQKLGENNFYSRDWTRTHGNLYQAI 267
>gi|261339418|ref|ZP_05967276.1| lipoprotein releasing system, transmembrane protein LolC
[Enterobacter cancerogenus ATCC 35316]
gi|288318223|gb|EFC57161.1| lipoprotein releasing system, transmembrane protein LolC
[Enterobacter cancerogenus ATCC 35316]
Length = 399
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 48/267 (17%), Positives = 99/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ V+ + Q + V L S S + +
Sbjct: 61 GLMPQAVLSSTNGSVNPQQLPESAAML----QGVTRVAPLTTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ +I+G+ LA LG++ GD++ ++ P
Sbjct: 117 IDPAQKDPLTPYLVNVKQTDLEAGKYNIILGEQLAGQLGVNRGDQLRVMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ + + D + +++Q+A ++G +++ P ++
Sbjct: 177 RLPSQRLFNVIGTFAANSEVDGYQMLVNIQDASRLMRYPAGNITGWRLWLDAPLKVDTLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW+ R F
Sbjct: 237 ---QQTLPEGTKWQDWRDRKGELFQAV 260
>gi|225630889|ref|YP_002727680.1| lipoprotein releasing system transmembrane protein lolc [Wolbachia
sp. wRi]
gi|225592870|gb|ACN95889.1| lipoprotein releasing system transmembrane protein lolc [Wolbachia
sp. wRi]
Length = 409
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 81/268 (30%), Positives = 132/268 (49%), Gaps = 6/268 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ FE+ +A YL + F SI + S IG+ +GV LIVVMSVMNGFR ++ +L
Sbjct: 1 MSIAFEITMAACYLRAKNAR-FCSIMTLFSIIGIALGVATLIVVMSVMNGFRAKLLDSIL 59
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
GI+GH+ + DY ++ ++ IP ++K P + Q + V+ +
Sbjct: 60 GIDGHINVYFDRNINSDYYAVSKSIERIPGILKATPMTNDQVIIVANGKIAGSVVRGVST 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G+V +G+IIG LA L + GD+I +S +G
Sbjct: 120 KDLLDSTAVTNNVIIGDV---KKFDEGIIIGARLAEALNVDYGDEITFISSEEFDALLGE 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K Y V+ +F M +YDN ++YM L+ AQ +FN +N++ IEV V D +K +
Sbjct: 177 MPRMKKYKVIAIFDMGMFEYDNTLIYMPLKSAQAFFNYKNSIKNIEVLVDDVTRADKLAD 236
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYES 270
I + +G + WQ + +FS ++
Sbjct: 237 AIEKEIG--MEAESWQSQQSHYFSALKT 262
>gi|293409482|ref|ZP_06653058.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli B354]
gi|291469950|gb|EFF12434.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli B354]
Length = 399
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 100/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q + L S S + +
Sbjct: 61 GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVA----PITTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ VI+G+ LA LG++ GD+I ++ P
Sbjct: 117 IDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S + + D + +++++A ++G +++ +P ++
Sbjct: 177 RIPSHRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW+ R F
Sbjct: 237 ---QQKLPEGSKWQDWRDRKGELFQAV 260
>gi|293396555|ref|ZP_06640831.1| lipoprotein ABC superfamily ATP binding cassette transporter,
membrane protein [Serratia odorifera DSM 4582]
gi|291420819|gb|EFE94072.1| lipoprotein ABC superfamily ATP binding cassette transporter,
membrane protein [Serratia odorifera DSM 4582]
Length = 400
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 57/267 (21%), Positives = 109/267 (40%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF +D+ +L
Sbjct: 1 MYQPVALFIGLRYMRGRASDRFGRFVSWLSTIGITLGVMALVTVLSVMNGFEKDLENNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ +I + Q A+ + + V +V P +G + S GV++
Sbjct: 61 GLMPQALITSPQGSINPQQLPASAVQGLQGVNRVAPLTTGDVVLQSARSVAVGVMLGVNP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + +I+G+ +A LG+ GDK+ ++ P
Sbjct: 121 DEADPLTPFLVNVK---QRQLQPGAYNIILGEVMAGKLGVKRGDKLRLMVPSASQFTPMG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + D D + ++ Q+A ++G +F++ P A++
Sbjct: 178 RIPSQRVFTIVGTFHANSDVDEYQLLVNQQDASRLMRYPAGNITGWRLFLQQPLAVDTLS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW++R F
Sbjct: 238 ---QQTLPQGSTWKDWRERKGELFQAV 261
>gi|156973822|ref|YP_001444729.1| outer membrane-specific lipoprotein transporter subunit LolE
[Vibrio harveyi ATCC BAA-1116]
gi|156525416|gb|ABU70502.1| hypothetical protein VIBHAR_01532 [Vibrio harveyi ATCC BAA-1116]
Length = 407
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 50/260 (19%), Positives = 99/260 (38%), Gaps = 1/260 (0%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
++ R+ + ++N +S S S IG+ +GV +I+ +S MNGF ++ RVL + H
Sbjct: 1 MIGGRFSRAKKRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQSRVLSVIPHGE 60
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
++ PL +Y N+ V+ P+V S + VRG+ + +
Sbjct: 61 LEGVNGPLHNYTKTMNQALSHEHVVAAAPYVRFTGLAEKG-SKLKAIEVRGVDPAFEQAV 119
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
+ +F G+ +I N L + + +
Sbjct: 120 SSMSEFIDPKAWQNFYAGQQQVILGRGVANELNVDVGDYITLMIPQTGSTNKVQAPKRVR 179
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
+ F D+ + + L++AQ Y L + V+GI + D + ++
Sbjct: 180 VKVAGFLTLNGQIDHSLALVPLKDAQAYARLGDGVTGISLKTDDVLNAPSIVREVGNLID 239
Query: 250 NGVVVIDWQQRYQIFFSCYE 269
V + WQQ++ + +
Sbjct: 240 VYVYLKSWQQQFGFLYRDIQ 259
>gi|323492538|ref|ZP_08097686.1| lipoprotein-releasing system transmembrane protein LolC [Vibrio
brasiliensis LMG 20546]
gi|323313325|gb|EGA66441.1| lipoprotein-releasing system transmembrane protein LolC [Vibrio
brasiliensis LMG 20546]
Length = 406
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 62/268 (23%), Positives = 107/268 (39%), Gaps = 7/268 (2%)
Query: 2 SIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
++F + RYL + F S++S G+ IGVM+L+ V+SVMNGF + R+
Sbjct: 4 TMFHPVSTFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKGRI 63
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
LG+ ++ Q Q + + D P V +A + S +G+L+
Sbjct: 64 LGVLPQAIVSQIDGVTDRSQQAPQFISDLSDAGHPEPIVQSEAVIQSSSQLTAGLLIGIK 123
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ G +SN V IG LAR L +S+GDK+ +L
Sbjct: 124 PSEHD---PIEEHLIAGRLSNLQAGKYQVFIGHTLARALDVSVGDKVRLLVTSASQFTPL 180
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKT 240
I S+ + D D ++ +++A L+ + ++G +F DP +
Sbjct: 181 GRIPSQRLFTVAGIYNTGSDVDGQLMLTHIEDAAKLMRLKADTMTGWRLFFNDPFIVADI 240
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCY 268
E + + G DW+ + F
Sbjct: 241 AE---QPMPQGWQWQDWRDQRGELFQAV 265
>gi|262165994|ref|ZP_06033731.1| lipoprotein releasing system transmembrane protein LolC [Vibrio
mimicus VM223]
gi|262025710|gb|EEY44378.1| lipoprotein releasing system transmembrane protein LolC [Vibrio
mimicus VM223]
Length = 402
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 58/267 (21%), Positives = 106/267 (39%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RYL + F S++S G+ IGVM+L+ V+SVMNGF + R+L
Sbjct: 1 MFHPISAFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ V+ Q + + P V +A V S +G+L+
Sbjct: 61 GVLPQAVVAQDTGKTALTTEPPAFISALSTQRAPEPLVRSEAVVQSASQLAAGLLIGIEP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G VS + + +G LAR+L +++GDK+ ++
Sbjct: 121 QQND---PIEQYLIAGRVSALQEGEYQLFLGHLLARSLNVTVGDKVRLMVTEASQFTPLG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTH 241
+ S+ + D D ++ L++A + +SG +F DP + +
Sbjct: 178 RLPSQRNFTVAGIFNTGSDVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFDDPFVVSELS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + L +G DW+++ F
Sbjct: 238 K---KPLPDGWQWSDWREQRGELFQAV 261
>gi|163740903|ref|ZP_02148296.1| lipoprotein releasing system transmembrane protein LolE
[Phaeobacter gallaeciensis 2.10]
gi|161385894|gb|EDQ10270.1| lipoprotein releasing system transmembrane protein LolE
[Phaeobacter gallaeciensis 2.10]
Length = 430
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 73/276 (26%), Positives = 122/276 (44%), Gaps = 10/276 (3%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FSRFE ++AWRYL + R +S+ ++IS IG+ + V ALI ++V GFR + + +LG
Sbjct: 7 FSRFEWLIAWRYLRARRAEGGVSVMTWISLIGIALAVFALIATLAVRTGFRSEFVGTILG 66
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
N HV + Q ++ + L + +
Sbjct: 67 ANAHVTLYSHGTVTEQGQIDRKLTEYDALAEAAAAVPGVIRTAPLIKGQVMASLRQRSAG 126
Query: 124 SDFSYLQNSFSRFYGNVSN-------DFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
+ + + ++ +GV +G +AR LG+S+GD+I ++SP G
Sbjct: 127 VEVFGISAANIATLPGIAQSEAAIGDLSRFDEGVALGSGVARELGVSVGDRIKLISPNGV 186
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
T G R +Y V+ +F D D +YM EAQ YFN E IEV V+DP+
Sbjct: 187 KTAFGTSPRVNAYEVVYIFTAGRYDIDRTRLYMPFAEAQSYFNREGFADEIEVMVEDPET 246
Query: 237 IEKTHENIVRI---LGNGVVVIDWQQRYQIFFSCYE 269
+++ +++ + +G+ V W+ F E
Sbjct: 247 VDRMVLPLLQAGDEVASGIGVWTWRDASGGFLRALE 282
>gi|283833506|ref|ZP_06353247.1| lipoprotein releasing system, transmembrane protein LolC
[Citrobacter youngae ATCC 29220]
gi|291071171|gb|EFE09280.1| lipoprotein releasing system, transmembrane protein LolC
[Citrobacter youngae ATCC 29220]
Length = 399
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 100/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ V+ + L Q + L S S + +
Sbjct: 61 GLMPQAVLSSEQGSLNPQQLPEKAVVLNGVNRVA----PITTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ VI+G+ LA LG++ GD+I ++ P
Sbjct: 117 IDPAQKDPLTPYLVNVKQTDLQPGKYNVILGEQLAGQLGVNRGDQIRVMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ + + D + ++Q+A ++G +++ +P ++
Sbjct: 177 RLPSQRLFTVIGTFAANSEVDGYQMLTNIQDASRLMRYPVGNITGWRLWLNEPLKVDTLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW++R F
Sbjct: 237 ---QQTLPQGTKWQDWRERKGELFQAV 260
>gi|242239056|ref|YP_002987237.1| outer membrane-specific lipoprotein transporter subunit LolC
[Dickeya dadantii Ech703]
gi|242131113|gb|ACS85415.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Dickeya dadantii Ech703]
Length = 400
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 101/267 (37%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF +D+ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSAIGITLGVMALVTVLSVMNGFEQDLEDSIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ +I L A L+ + V L S S + +
Sbjct: 61 GLMPQALITTPQGFLDPQTLPAPTLNALKG---VTQITPLTTGDVVLQSARSVAVGVMLG 117
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++ VI+G+ LA L + GD++ ++
Sbjct: 118 VNPEQPEPLARYLVNASMQALKPGDYQVILGEQLAAQLDVKRGDQLRLMVTSASQLTPMG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + ++ Q+A ++G + + P A++
Sbjct: 178 RIPSQRLFTVAGTFYAHSEVDGYQLLVNQQDASRLMRYPAGNITGWRLSLAQPLAVDVLA 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G V DW++R F
Sbjct: 238 R---QSLPQGTVWKDWRERKGELFQAV 261
>gi|229589094|ref|YP_002871213.1| putative lipoprotein releasing system, membrane protein
[Pseudomonas fluorescens SBW25]
gi|229360960|emb|CAY47820.1| putative lipoprotein releasing system, membrane protein
[Pseudomonas fluorescens SBW25]
Length = 416
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 73/268 (27%), Positives = 121/268 (45%), Gaps = 3/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RY + R+N F+S S S IG+ +GV+ +IVV+SVMNGF +M RVL
Sbjct: 1 MFRPLFVFIGTRYTRAKRRNHFVSFISLTSMIGLALGVVVMIVVLSVMNGFDHEMRTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I+ P+ D+Q +A ++ P V+ V PF Q ++ +L
Sbjct: 61 GMVPHATIEGDA-PISDWQSLAAKVKQNPKVLAVAPFTQMQGLLTNDGKVQKILLNAIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G + + G++IG A LG+ +GDK+ ++P VTP GM
Sbjct: 120 AQERNVSIIDKFMLQGKLDDLAPGSFGIVIGDKAAAKLGVGLGDKLTFVAPEVTVTPAGM 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
R K +TV+G F + + D + +L + + V G+ + D +
Sbjct: 180 FPRMKRFTVVGTFHVGAGEIDGYLGLTNLTDLARLHRWQPDQVQGLRLKFNDLFDAPRGA 239
Query: 242 ENIVRILGNG-VVVIDWQQRYQIFFSCY 268
I + LG DW + + +
Sbjct: 240 WEIAQHLGENQYYARDWTRTHGNLYQAI 267
>gi|269960987|ref|ZP_06175356.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269834206|gb|EEZ88296.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 407
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 49/260 (18%), Positives = 99/260 (38%), Gaps = 1/260 (0%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
++ R+ + ++N +S S S IG+ +GV +I+ +S MNGF ++ RVL + H
Sbjct: 1 MIGGRFSRAKKRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQSRVLSVIPHGE 60
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
++ PL +Y N+ V+ P+V + + VRG+ + +
Sbjct: 61 LEGVNGPLHNYTKTMNQALNHEHVVAAAPYVRFTGLAEKG-TKLKAIEVRGVDPAFEQAV 119
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
+ +F G+ +I N L + + +
Sbjct: 120 SSMSEFIDPEAWQNFYPGQKQVILGRGVANELNVDVGDYITLMIPQTGSTNKVQAPKRVR 179
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
+ F D+ + + L++AQ Y L + V+GI + D + ++
Sbjct: 180 VKVAGFLTLNGQIDHSLALVPLKDAQAYARLGDGVTGISLKTDDVLNAPSIVREVGNLID 239
Query: 250 NGVVVIDWQQRYQIFFSCYE 269
V + WQQ++ + +
Sbjct: 240 VYVYLKSWQQQFGFLYRDIQ 259
>gi|170768238|ref|ZP_02902691.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia albertii TW07627]
gi|170123004|gb|EDS91935.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia albertii TW07627]
Length = 399
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 101/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q + L S S + +
Sbjct: 61 GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVA----PITTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ VI+G+ LA LG++ GD+I ++ P
Sbjct: 117 IDPAQKDPLTPYLVNVKQADLEPGKYNVILGEQLASLLGVNRGDQIRVMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + +++++A ++G +++ +P ++
Sbjct: 177 RIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW+ R F
Sbjct: 237 ---QQKLPEGSKWQDWRDRKGELFQAV 260
>gi|311279977|ref|YP_003942208.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Enterobacter cloacae SCF1]
gi|308749172|gb|ADO48924.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Enterobacter cloacae SCF1]
Length = 399
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 52/267 (19%), Positives = 102/267 (38%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ +I + + Q A+ L L S S + +
Sbjct: 61 GLMPQAIISSEQGSINPQQLPASALKLQGVDRVA----PLTTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ VI+G+ LA LG++ GD+I ++ P
Sbjct: 117 IDPAQNDPLTPYLVNIKQTDLAAGQYNVILGEQLAGQLGVNRGDQIRVMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + +++Q+A ++G +++ P ++
Sbjct: 177 RIPSQRLFNVIGTFAANSEVDGYQMLVNIQDASRLMRYPAGNITGWRLWLDKPLQVDTLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW++R F
Sbjct: 237 ---QQTLPQGTQWQDWRERKGELFQAV 260
>gi|254456043|ref|ZP_05069472.1| ABC transporter [Candidatus Pelagibacter sp. HTCC7211]
gi|207083045|gb|EDZ60471.1| ABC transporter [Candidatus Pelagibacter sp. HTCC7211]
Length = 411
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 71/267 (26%), Positives = 133/267 (49%), Gaps = 4/267 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ S E + +R+L + +K+ F++I S SFIG+ +GV LI+VMSVMNGFR ++I +++
Sbjct: 1 MISTLEKEITFRFLKARKKDGFLNIISIFSFIGISLGVAVLIIVMSVMNGFRTELINKIV 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G N H+ + K Y + + + + + F + + ++ G+++RG
Sbjct: 61 GFNSHITV--KSYEENGINQNKLKNNNLKLISNDIIFSNSGEAIILKNNTSKGIVLRGYK 118
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ DFS L ++ + + IG +L+ +L + IGDKI ++SP G T +G
Sbjct: 119 SDDFSKLTIIKNKKFKG-IRSHLDENSISIGNELSFSLDLKIGDKITLMSPSGVETIIGS 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ K + V +F D+DN + ++L +F E +E+++K+P+ IE +
Sbjct: 178 MPKQKIFKVTSIFNSGLADFDNNIALINLDTLDDFFGFEKKDRNLEIYLKNPNNIETQKQ 237
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I + W + FS +
Sbjct: 238 IVQEIFDQEF-IYTWADMNKSLFSALK 263
>gi|330878584|gb|EGH12733.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. morsprunorum str. M302280PT]
Length = 416
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 74/268 (27%), Positives = 122/268 (45%), Gaps = 3/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RY + R+N F+S S S IG+ +GV+ +IVV+SVMNGF +M RVL
Sbjct: 1 MFRPLFVFIGTRYTRAKRRNHFVSFISLTSMIGLALGVVVMIVVLSVMNGFDHEMRTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I + P+ D++ +A ++ P V+ V PF Q ++ +L
Sbjct: 61 GMVPHATI-ESADPITDWRGLAAKVQENPQVLAVAPFTQMQGLLTHDGKVQKVLLNGINP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G + + G++IG A LG+ +GDK+ ++P VTP GM
Sbjct: 120 AEERKVSIIDHFIKQGQLDSLSPGSFGIMIGDKAAAKLGVVVGDKLTFVAPEVTVTPAGM 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLENAVSGIEVFVKDPDAIEKTH 241
R K + V G+F + + D + +L + + V G+ + D A +T
Sbjct: 180 FPRMKRFEVTGIFHVGAGEIDGFLGLTNLDDLARLHRWKPDQVQGLRLKFDDLFAAPRTS 239
Query: 242 ENIVRILG-NGVVVIDWQQRYQIFFSCY 268
I + LG N DW + + +
Sbjct: 240 WEIAQKLGENNFYSRDWTRTHGNLYQAI 267
>gi|254461775|ref|ZP_05075191.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Rhodobacterales bacterium HTCC2083]
gi|206678364|gb|EDZ42851.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Rhodobacteraceae bacterium HTCC2083]
Length = 423
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 71/274 (25%), Positives = 128/274 (46%), Gaps = 11/274 (4%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+RFE ++AWRYL + R +S+ ++IS IG+ + V AL+ +++ G R + ++ +LG
Sbjct: 3 FARFEWMIAWRYLRAKRAEGGVSVMTWISLIGITLAVFALVATLAIRTGLRAETLRTILG 62
Query: 64 INGHVVIQQKYYPL---------VDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
++ H + DY+ + RL IP V +P V + +
Sbjct: 63 VSAHAELYYPRTVQANGAQDAIIRDYETLTERLRAIPGVQDAVPVVKARIIANRARQNAP 122
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
L + + S + + KG+ +G+ LAR L ++IGD++ I+SP
Sbjct: 123 IELFGIRPEDLARFPAVAESEQAQG--DLANLPKGIALGQSLARTLDVTIGDRVKIISPN 180
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G T G+ R K++ V+ +FR DN Y+SL EAQ + N E V I++ + DP
Sbjct: 181 GTRTAFGVSPRVKTWEVVYIFRTGQGFVDNSRAYLSLAEAQPFLNREAGVDQIDIVLDDP 240
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ +++ + + + W++R
Sbjct: 241 EMVDQMETQLAQSSTGPAYIWSWRERSGAVLRAL 274
>gi|312959645|ref|ZP_07774162.1| lipoprotein releasing system transmembrane protein [Pseudomonas
fluorescens WH6]
gi|311286362|gb|EFQ64926.1| lipoprotein releasing system transmembrane protein [Pseudomonas
fluorescens WH6]
Length = 416
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 73/268 (27%), Positives = 121/268 (45%), Gaps = 3/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RY + R+N F+S S S IG+ +GV+ +IVV+SVMNGF +M RVL
Sbjct: 1 MFRPLFVFIGTRYTRAKRRNHFVSFISLTSMIGLALGVVVMIVVLSVMNGFDHEMRTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I+ P+ D+Q +A ++ P V+ V PF Q ++ +L
Sbjct: 61 GMVPHATIEGDA-PISDWQSLAAKVKQNPKVLAVAPFTQMQGLLTHDGKVQKILLNAIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G + + G++IG A LG+ +GDK+ ++P VTP GM
Sbjct: 120 AQERNVSIIDKFMLQGKLDDLAPGSFGIVIGDKAAAKLGVGLGDKLTFVAPEVTVTPAGM 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
R K +TV+G F + + D + +L + + V G+ + D +
Sbjct: 180 FPRMKRFTVVGTFHVGAGEIDGYLGLTNLTDLARLHRWQPDQVQGLRLKFSDLFDAPRGA 239
Query: 242 ENIVRILGN-GVVVIDWQQRYQIFFSCY 268
I + LG DW + + +
Sbjct: 240 WEIAQQLGESQYYARDWTRTHGNLYQAI 267
>gi|302383073|ref|YP_003818896.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Brevundimonas subvibrioides ATCC 15264]
gi|302193701|gb|ADL01273.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Brevundimonas subvibrioides ATCC 15264]
Length = 433
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 82/270 (30%), Positives = 130/270 (48%), Gaps = 4/270 (1%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS +E+ +A RYL + RK ++ + ISF+G+M+ V LI VMS+M GFR +++ R+L
Sbjct: 16 FSAWEIGLALRYLRAKRKEGGVATIAIISFVGIMLAVAVLISVMSIMAGFRTELLGRMLS 75
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
NGH+ +Q + + I +RL + V+ V P QA + GV+
Sbjct: 76 FNGHMYVQGEVLNAPNRDAIVDRLRGVEGVVSVSPLTESQALIIAGGQTTGGVVRGLRPE 135
Query: 124 S---DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ ++ + G V+IG+ LA LG+ +GD I I SP G +
Sbjct: 136 DLDTMQYVSSSLSAQAKASFGQGAYGGDNVLIGQALADQLGLRVGDPIQIYSPTGADSAF 195
Query: 181 GMGIR-SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
G SK+Y V G + DYD ++M L++AQL+F E IE+ V +PD + +
Sbjct: 196 GNLGGLSKTYRVGGTYSSGTADYDRIFIFMPLEQAQLFFGKEGVWDVIEMKVANPDRVGE 255
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ G V DW+ R F+ +
Sbjct: 256 YIAPVRAAAGPAAFVQDWRDRLAAFWGALK 285
>gi|225677321|ref|ZP_03788298.1| lipoprotein releasing system transmembrane protein lolc [Wolbachia
endosymbiont of Muscidifurax uniraptor]
gi|225590648|gb|EEH11898.1| lipoprotein releasing system transmembrane protein lolc [Wolbachia
endosymbiont of Muscidifurax uniraptor]
Length = 409
Score = 124 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 82/268 (30%), Positives = 132/268 (49%), Gaps = 6/268 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ FE+ +A YL + F SI + S IG+ +GV LIVVMSVMNGFR ++ +L
Sbjct: 1 MSIAFEITMAACYLRARNAR-FCSIMTLFSIIGIALGVATLIVVMSVMNGFRAKLLDSIL 59
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
GI+GH+ + DY ++ ++ IP ++K P + Q + V+ +
Sbjct: 60 GIDGHINVYFDRNINSDYYAVSKSIERIPGILKATPMTNDQVIIVANGKIAGSVVRGVST 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G+V +G+IIG LA L I GD+I +S +G
Sbjct: 120 KDLLDSTAVTNNVIIGDV---KKFDEGIIIGARLAEVLNIDYGDEITFISSEEFDALLGE 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K Y V+ +F M +YDN ++YM L+ AQ +FN +N++ IEV V D +K +
Sbjct: 177 MPRMKKYKVIAIFDMGMFEYDNTLIYMPLKSAQAFFNYKNSIKNIEVLVDDVTRADKLAD 236
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYES 270
I + +G + WQ + +FS ++
Sbjct: 237 AIEKEIG--MEAESWQSQQSHYFSALKT 262
>gi|161503690|ref|YP_001570802.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. arizonae serovar
62:z4,z23:-- str. RSK2980]
gi|160865037|gb|ABX21660.1| hypothetical protein SARI_01774 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 399
Score = 124 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 51/267 (19%), Positives = 102/267 (38%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q +D L S S + +
Sbjct: 61 GLMPQAILSPEHGSLNPNQVPKKDVDLQGVNRIA----PLTTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S VI+G+ LA LG++ GD+I ++ P
Sbjct: 117 IDPAQKDPLTPYLVNVKQSELQPGKYNVILGEQLAGQLGVNRGDQIRVMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ + + D + +++Q+A ++G +++ +P ++
Sbjct: 177 RLPSQRLFTVIGTFAANSEVDGYEMLVNIQDASRLMRYPAGNITGWRLWLDEPLKVDTLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW++R F
Sbjct: 237 ---QQTLPKGTKWQDWRERKGELFQAV 260
>gi|258621370|ref|ZP_05716404.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|258586758|gb|EEW11473.1| conserved hypothetical protein [Vibrio mimicus VM573]
Length = 406
Score = 124 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 59/267 (22%), Positives = 107/267 (40%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RYL + F S++S G+ IGVM+L+ V+SVMNGF + R+L
Sbjct: 5 MFHPISAFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRIL 64
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ V+ Q V + + P V +A V S +G+L+
Sbjct: 65 GVLPQAVVAQDTGKTVLTTEPPAFISALSTQRAPEPLVRSEAVVQSASQLAAGLLIGIEP 124
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G VS + + +G LAR+L +++GDK+ ++
Sbjct: 125 QQND---PIEQYLIAGRVSALQEGEYQLFLGHLLARSLNVTVGDKVRLMVTEASQFTPLG 181
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTH 241
+ S+ + D D ++ L++A + +SG +F DP + +
Sbjct: 182 RLPSQRNFTVAGIFNTGSDVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFDDPFVVSELS 241
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + L +G DW+++ F
Sbjct: 242 K---KSLPDGWQWSDWREQRGELFQAV 265
>gi|296102866|ref|YP_003613012.1| lipoprotein-releasing system transmembrane protein [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|295057325|gb|ADF62063.1| lipoprotein-releasing system transmembrane protein [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 399
Score = 124 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 100/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ + Q + V L S S + +
Sbjct: 61 GLMPQAILSSTNGSVNPQQLPESAAKL----QGVTRVAPVTTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S+ VI+G+ LA LG++ GD++ ++ P
Sbjct: 117 IDPAQKDPLTPYLVNVKQSDLEAGKYNVILGEQLAGQLGVNRGDQLRVMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ + + D + M++Q+A ++G +++ P ++
Sbjct: 177 RLPSQRLFTVIGTFAANSEVDGYQMLMNIQDASRLMRYPVGNITGWRLWLDAPLKVDTLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW++R F
Sbjct: 237 ---QQTLPEGTKWQDWRERKGELFQAV 260
>gi|320540381|ref|ZP_08040031.1| outer membrane-specific lipoprotein transporter subunit [Serratia
symbiotica str. Tucson]
gi|320029312|gb|EFW11341.1| outer membrane-specific lipoprotein transporter subunit [Serratia
symbiotica str. Tucson]
Length = 415
Score = 124 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 56/265 (21%), Positives = 111/265 (41%), Gaps = 1/265 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ + A R++ ++ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L +
Sbjct: 4 ASLSFLTALRFIRGRKRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELQNRILAV 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H I+ PL + + R++ +P ++ P+++ + + +
Sbjct: 64 VPHGEIEAVNQPLQCWLSMLRRVEKVPGILAAAPYINFTGLMENGVQLRAVQIKGVNPQQ 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ N + VI+GK +A LG+ G + ++ P D +
Sbjct: 124 ENQLSALPQFVQGDAWINFKAGEQQVILGKGVADALGVKRGAYVTVMIPNSDPELKLLQP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ V G+ + D+G+V + L +AQ Y ++ + V+GI + V A K +
Sbjct: 184 KRIRLHVTGIMQ-LSGQLDHGLVLVPLGDAQQYLDIGDGVTGIAIKVSQVFAANKLVRDA 242
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ V + W Y + +
Sbjct: 243 GEVTDAYVYIKSWISTYGYMYRDIQ 267
>gi|261210527|ref|ZP_05924820.1| lipoprotein releasing system transmembrane protein LolC [Vibrio sp.
RC341]
gi|260840312|gb|EEX66883.1| lipoprotein releasing system transmembrane protein LolC [Vibrio sp.
RC341]
Length = 402
Score = 124 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 58/267 (21%), Positives = 107/267 (40%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RYL + F S++S G+ IGVM+L+ V+SVMNGF + R+L
Sbjct: 1 MFHPISVFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFETQLKSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ V+ Q + + + P V +A V S +G+L+
Sbjct: 61 GVLPQAVVTQDVGKTAFANQPPAFISALSTLRAPEPLVRSEAVVQSASQLAAGLLIGIEP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G+V+ + +G LAR+L +++GDK+ ++
Sbjct: 121 QQND---PIEQHLIAGHVTALQAGEYQLFLGHLLARSLNVTVGDKVRLMVTEASQFTPLG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTH 241
+ S+ + D D ++ L++A + +SG +F DP +
Sbjct: 178 RLPSQRNFTVAGIFNTGSDVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFDDPFVVSTLA 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + L +G DW+++ F
Sbjct: 238 K---QPLPDGWQWSDWREQRGELFQAV 261
>gi|119478444|ref|ZP_01618429.1| hypothetical protein GP2143_07008 [marine gamma proteobacterium
HTCC2143]
gi|119448530|gb|EAW29777.1| hypothetical protein GP2143_07008 [marine gamma proteobacterium
HTCC2143]
Length = 430
Score = 124 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 42/272 (15%), Positives = 86/272 (31%), Gaps = 5/272 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS + + + RY + R++ +S S +S G+ +GV LI+V+SVMNGF +M R+L
Sbjct: 11 LFSPYPLFIGIRYAGAKRRSQLVSFISGVSMCGMAVGVALLILVLSVMNGFDREMRTRIL 70
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ + + V + + + V + L G V
Sbjct: 71 GLVPQINVISYGKGAVQPEDWRDVEAQVLRHPDVKAVAPFVQLNAMLLKGTIVEGVLIYG 130
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S Y N + ++
Sbjct: 131 IDQQREQSVSIIGDYVNDLALESLSDAEGSHSKGILLGAALALRLGVSVGDNINLMVSQQ 190
Query: 183 GIRSKSYTVLGMFRMRF-----PDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
+ ++ + D + +S+ A + G+ V + D
Sbjct: 191 SDSGRVSPKFVRLKVSSLIKTGTELDQSVALISINRALSLMPPDLRRKGLRVTLNDTFEA 250
Query: 238 EKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + + G + DW + + +S +
Sbjct: 251 PRVAWELSQNIPYGYIARDWTRTHGNLYSAIQ 282
>gi|28869312|ref|NP_791931.1| lipoprotein releasing system transmembrane protein LolC
[Pseudomonas syringae pv. tomato str. DC3000]
gi|213967350|ref|ZP_03395498.1| lipoprotein releasing system transmembrane protein LolC
[Pseudomonas syringae pv. tomato T1]
gi|301381684|ref|ZP_07230102.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. tomato Max13]
gi|302058442|ref|ZP_07249983.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. tomato K40]
gi|302131153|ref|ZP_07257143.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. tomato NCPPB 1108]
gi|28852553|gb|AAO55626.1| lipoprotein releasing system transmembrane protein LolC
[Pseudomonas syringae pv. tomato str. DC3000]
gi|213927651|gb|EEB61198.1| lipoprotein releasing system transmembrane protein LolC
[Pseudomonas syringae pv. tomato T1]
Length = 416
Score = 124 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 74/268 (27%), Positives = 122/268 (45%), Gaps = 3/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RY + R+N F+S S S IG+ +GV+ +IVV+SVMNGF +M RVL
Sbjct: 1 MFRPLFVFIGTRYTRAKRRNHFVSFISLTSMIGLALGVVVMIVVLSVMNGFDHEMRTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I + P+ D++ +A ++ P V+ V PF Q ++ +L
Sbjct: 61 GMVPHATI-ESADPITDWRGLAAKVQENPQVLAVAPFTQMQGLLTHDGKVQKVLLNGINP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G + + G++IG A LG+ +GDK+ ++P VTP GM
Sbjct: 120 AEERKVSIIDHFIQQGQLDSLSAGSFGIMIGDKAAAKLGVVVGDKLTFVAPEVTVTPAGM 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLENAVSGIEVFVKDPDAIEKTH 241
R K + V G+F + + D + +L + + V G+ + D A +T
Sbjct: 180 FPRMKRFEVTGIFHVGAGEIDGFLGLTNLDDLARLHRWKPDQVQGLRLKFDDLFAAPRTS 239
Query: 242 ENIVRILG-NGVVVIDWQQRYQIFFSCY 268
I + LG N DW + + +
Sbjct: 240 WEIAQKLGENNFYSRDWTRTHGNLYQAI 267
>gi|331019546|gb|EGH99602.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. lachrymans str. M302278PT]
Length = 416
Score = 124 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 74/268 (27%), Positives = 122/268 (45%), Gaps = 3/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RY + R+N F+S S S IG+ +GV+ +IVV+SVMNGF +M RVL
Sbjct: 1 MFRPLFVFIGTRYTRAKRRNHFVSFISLTSMIGLALGVVVMIVVLSVMNGFDHEMRTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I + P+ D++ +A ++ P V+ V PF Q ++ +L
Sbjct: 61 GMVPHATI-ESADPITDWRGLAAKVQENPQVLAVAPFTQMQGLLTHDGKVQKVLLNGINP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G + + G++IG A LG+ +GDK+ ++P VTP GM
Sbjct: 120 AEERKVSIIDHFIQQGQLDSLSAGSFGIMIGDKAAAKLGVVVGDKLTFVAPEVTVTPAGM 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLENAVSGIEVFVKDPDAIEKTH 241
R K + V G+F + + D + +L + + V G+ + D A +T
Sbjct: 180 FPRMKRFEVTGIFHVGAGEIDGFLGLTNLDDLARLHRWKPDQVQGLRLKFDDLFAAPRTS 239
Query: 242 ENIVRILG-NGVVVIDWQQRYQIFFSCY 268
I + LG N DW + + +
Sbjct: 240 WEIAQKLGENNFYSRDWTRTHGNLYQAI 267
>gi|39546312|ref|NP_460187.2| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Typhimurium
str. LT2]
gi|161614552|ref|YP_001588517.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Paratyphi B
str. SPB7]
gi|167991997|ref|ZP_02573096.1| lipoprotein-releasing system transmembrane protein LolC [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|168233097|ref|ZP_02658155.1| lipoprotein-releasing system transmembrane protein LolC [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|168239123|ref|ZP_02664181.1| lipoprotein-releasing system transmembrane protein LolC [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|168264272|ref|ZP_02686245.1| lipoprotein-releasing system transmembrane protein LolC [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
gi|168467177|ref|ZP_02701019.1| lipoprotein-releasing system transmembrane protein LolC [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|194470568|ref|ZP_03076552.1| lipoprotein-releasing system transmembrane protein LolC [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|194734536|ref|YP_002114223.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197265369|ref|ZP_03165443.1| lipoprotein-releasing system transmembrane protein LolC [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|200390873|ref|ZP_03217484.1| lipoprotein-releasing system transmembrane protein LolC [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|204930819|ref|ZP_03221692.1| lipoprotein-releasing system transmembrane protein LolC [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
gi|213051994|ref|ZP_03344872.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Typhi str.
E00-7866]
gi|213425040|ref|ZP_03357790.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Typhi str.
E02-1180]
gi|213609326|ref|ZP_03369152.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Typhi str.
E98-2068]
gi|213864857|ref|ZP_03386976.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Typhi str.
M223]
gi|238910963|ref|ZP_04654800.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Tennessee
str. CDC07-0191]
gi|161363916|gb|ABX67684.1| hypothetical protein SPAB_02301 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194456932|gb|EDX45771.1| lipoprotein-releasing system transmembrane protein LolC [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|194710038|gb|ACF89259.1| lipoprotein-releasing system transmembrane protein LolC [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|195630298|gb|EDX48924.1| lipoprotein-releasing system transmembrane protein LolC [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|197243624|gb|EDY26244.1| lipoprotein-releasing system transmembrane protein LolC [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|197288134|gb|EDY27521.1| lipoprotein-releasing system transmembrane protein LolC [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|199603318|gb|EDZ01864.1| lipoprotein-releasing system transmembrane protein LolC [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|204320278|gb|EDZ05482.1| lipoprotein-releasing system transmembrane protein LolC [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
gi|205329815|gb|EDZ16579.1| lipoprotein-releasing system transmembrane protein LolC [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|205332654|gb|EDZ19418.1| lipoprotein-releasing system transmembrane protein LolC [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|205347202|gb|EDZ33833.1| lipoprotein-releasing system transmembrane protein LolC [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
gi|301157758|emb|CBW17250.1| ABC transporter integral membrane subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. SL1344]
gi|312912205|dbj|BAJ36179.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Typhimurium
str. T000240]
gi|321223833|gb|EFX48896.1| Lipoprotein releasing system transmembrane protein LolC [Salmonella
enterica subsp. enterica serovar Typhimurium str.
TN061786]
gi|322616593|gb|EFY13502.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Montevideo
str. 315996572]
gi|322619892|gb|EFY16766.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-1]
gi|322622460|gb|EFY19305.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-3]
gi|322629422|gb|EFY26199.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-4]
gi|322633906|gb|EFY30644.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Montevideo
str. 515920-1]
gi|322636837|gb|EFY33540.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Montevideo
str. 515920-2]
gi|322641363|gb|EFY38002.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Montevideo
str. 531954]
gi|322645128|gb|EFY41657.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Montevideo
str. NC_MB110209-0054]
gi|322652292|gb|EFY48648.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Montevideo
str. OH_2009072675]
gi|322655643|gb|EFY51945.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Montevideo
str. CASC_09SCPH15965]
gi|322660948|gb|EFY57178.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Montevideo
str. 19N]
gi|322665466|gb|EFY61654.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Montevideo
str. 81038-01]
gi|322667557|gb|EFY63718.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Montevideo
str. MD_MDA09249507]
gi|322673649|gb|EFY69751.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Montevideo
str. 414877]
gi|322677575|gb|EFY73639.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Montevideo
str. 366867]
gi|322679760|gb|EFY75799.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Montevideo
str. 413180]
gi|322687233|gb|EFY83205.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Montevideo
str. 446600]
gi|323129486|gb|ADX16916.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Typhimurium
str. 4/74]
gi|323194019|gb|EFZ79220.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Montevideo
str. 609458-1]
gi|323199428|gb|EFZ84521.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Montevideo
str. 556150-1]
gi|323208843|gb|EFZ93781.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Montevideo
str. 507440-20]
gi|323217817|gb|EGA02532.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB101509-0077]
gi|323218872|gb|EGA03383.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB102109-0047]
gi|323228044|gb|EGA12185.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB110209-0055]
gi|323229620|gb|EGA13743.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB111609-0052]
gi|323232845|gb|EGA16941.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Montevideo
str. 2009083312]
gi|323240119|gb|EGA24163.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Montevideo
str. 2009085258]
gi|323242894|gb|EGA26915.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Montevideo
str. 315731156]
gi|323246810|gb|EGA30780.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2009159199]
gi|323254290|gb|EGA38107.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008282]
gi|323255556|gb|EGA39315.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008283]
gi|323266986|gb|EGA50471.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008285]
gi|323272090|gb|EGA55504.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008287]
Length = 399
Score = 124 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 102/267 (38%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q ++ L S S + +
Sbjct: 61 GLMPQAILSAEHGSLNPNQMPEKAVNLQGVNRIA----PLTTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S VI+G+ LA LG++ GD+I ++ P
Sbjct: 117 IDPAQKDPLTPYLVNVKQSELQPGKYNVILGEQLAGQLGVNRGDQIRLMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ + + D + +++Q+A ++G +++ +P ++
Sbjct: 177 RLPSQRLFTVIGTFAANSEVDGYEMLVNIQDASRLMRYPAGNITGWRLWLDEPLQVDTLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW++R F
Sbjct: 237 ---QQTLPQGTKWQDWRERKGELFQAV 260
>gi|262171150|ref|ZP_06038828.1| lipoprotein releasing system transmembrane protein LolC [Vibrio
mimicus MB-451]
gi|261892226|gb|EEY38212.1| lipoprotein releasing system transmembrane protein LolC [Vibrio
mimicus MB-451]
Length = 402
Score = 124 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 58/267 (21%), Positives = 106/267 (39%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RYL + F S++S G+ IGVM+L+ V+SVMNGF + R+L
Sbjct: 1 MFHPISAFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ V+ Q + + P V +A V S +G+L+
Sbjct: 61 GVLPQAVVAQDTGKTALTAEPPAFISALSTQRAPEPLVRSEAVVQSASQLAAGLLIGIEP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G VS + + +G LAR+L +++GDK+ ++
Sbjct: 121 QQND---PIEQYLIAGRVSALQEGEYQLFLGHLLARSLNVTVGDKVRLMVTEASQFTPLG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTH 241
+ S+ + D D ++ L++A + +SG +F DP + +
Sbjct: 178 RLPSQRNFTVAGIFNTGSDVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFDDPFVVSELS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + L +G DW+++ F
Sbjct: 238 K---KPLPDGWQWSDWREQRGELFQAV 261
>gi|194445682|ref|YP_002040472.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|197251806|ref|YP_002146824.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Agona str.
SL483]
gi|194404345|gb|ACF64567.1| lipoprotein-releasing system transmembrane protein LolC [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|197215509|gb|ACH52906.1| lipoprotein-releasing system transmembrane protein LolC [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
Length = 399
Score = 124 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 102/267 (38%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q ++ L S S + +
Sbjct: 61 GLMPQAILSAEHGSLNPSQMPEKAVNLQGVNRIA----PLTTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S VI+G+ LA LG++ GD+I ++ P
Sbjct: 117 IDPTQKDPLTPYLVNVKQSELQPGKYNVILGEQLAGQLGVNRGDQIRLMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ + + D + +++Q+A ++G +++ +P ++
Sbjct: 177 RLPSQRLFTVIGTFAANSEVDGYEMLVNIQDASRLMRYPAGNITGWRLWLDEPLQVDTLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW++R F
Sbjct: 237 ---QQTLPQGTKWQDWRERKGELFQAV 260
>gi|258626797|ref|ZP_05721604.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|258580844|gb|EEW05786.1| conserved hypothetical protein [Vibrio mimicus VM603]
Length = 406
Score = 124 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 58/267 (21%), Positives = 106/267 (39%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RYL + F S++S G+ IGVM+L+ V+SVMNGF + R+L
Sbjct: 5 MFHPISAFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRIL 64
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ V+ Q + + P V +A V S +G+L+
Sbjct: 65 GVLPQAVVAQDTGKTALTTEPPAFISALSTQRAPEPLVRSEAVVQSASQLAAGLLIGIEP 124
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G VS + + +G LAR+L +++GDK+ ++
Sbjct: 125 QQND---PIEQYLIAGRVSALQEGEYQLFLGHLLARSLNVTVGDKVRLMVTEASQFTPLG 181
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTH 241
+ S+ + D D ++ L++A + +SG +F DP + +
Sbjct: 182 RLPSQRNFTVAGIFNTGSDVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFDDPFVVSELS 241
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + L +G DW+++ F
Sbjct: 242 K---KPLPDGWKWSDWREQRGELFQAV 265
>gi|242239058|ref|YP_002987239.1| outer membrane-specific lipoprotein transporter subunit LolE
[Dickeya dadantii Ech703]
gi|242131115|gb|ACS85417.1| lipoprotein releasing system, transmembrane protein LolE [Dickeya
dadantii Ech703]
Length = 415
Score = 124 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 58/266 (21%), Positives = 107/266 (40%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F + V R+ R + +S+ S IS +G+ +GV LIV +S MNGF ++ R+L
Sbjct: 3 FPPLSLRVGLRFSRGRRCSGMVSLISIISTLGIALGVAVLIVGLSAMNGFERELNSRILA 62
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ H I+ P +Q + +++ +P ++ P+V + +S +
Sbjct: 63 VVPHGEIEAAEQPFNHWQPLIPKIEQVPGIVAAAPYVRFTGLLENGASLRAVQFKGVEPQ 122
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ S + VIIGK +A LG+ GD + ++ P D M +
Sbjct: 123 EEGRLSALPQFVLNQAWSRFRAGEQQVIIGKGVADALGVKAGDWVTVMIPNSD-PQMKLL 181
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ + D+ + + L +AQ Y ++ +AV+GI + V D +
Sbjct: 182 QPKRIRLQVSGILQLSGQLDHSLALVPLADAQQYLDMGDAVTGIAIKVTDVFDARNRVHD 241
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
G V + W Y + +
Sbjct: 242 AGEATGAYVYIRSWIGTYGYMYRDIQ 267
>gi|254294082|ref|YP_003060105.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Hirschia baltica ATCC 49814]
gi|254042613|gb|ACT59408.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Hirschia baltica ATCC 49814]
Length = 444
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 68/268 (25%), Positives = 122/268 (45%), Gaps = 3/268 (1%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F FE ++A+RY+ + R++ +++ S +S +GV + V ALI +MS+MNGFR +++ +V+G
Sbjct: 28 FGPFERMLAFRYIRAKREHGGLALISVVSTVGVTLAVFALITIMSIMNGFRLELLSKVVG 87
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
HV + P D + R+ + V+ V P + + +
Sbjct: 88 FEPHVYVNAVEMPTADADDLGRRISELDGVVNVAPVIEEMVLADSGGRKEGVSVKGLRPH 147
Query: 124 S---DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + + R ++IG+ LAR++G +G +I +LSP G T M
Sbjct: 148 DLEAIDLIVSHISEGDLSQFGVEGTRSDTIVIGEGLARSMGAVVGSRIKLLSPNGPSTVM 207
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G RSK YTV ++ + YD V M + A+L+F+ ++ + V ++DPD E
Sbjct: 208 GQVPRSKVYTVTAIYNVGNEKYDRYTVIMPMAHARLFFSKGDSYQYLGVRIEDPDQAENL 267
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCY 268
++ DW+
Sbjct: 268 VRSLREKGITNRYARDWKSLNAQLVGAL 295
>gi|238897366|ref|YP_002923043.1| transport protein of outer membrane lipoproteins (ABC superfamily,
membrane) [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229465121|gb|ACQ66895.1| transport protein of outer membrane lipoproteins (ABC superfamily,
membrane) [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 400
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 58/268 (21%), Positives = 115/268 (42%), Gaps = 7/268 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY++ R + F + S +S IG+M+GVM++IVV+SVMNGF D+ VL
Sbjct: 1 MYQPVTLFIGLRYIYGRRSDRFGRLVSSLSSIGIMLGVMSMIVVLSVMNGFERDLQNNVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H +I + + A++L + + + P + + + +GV++
Sbjct: 61 GLMPHALITTPENVIDPQKIPASKLQNLKGIKHIAPITTSDVVIQSAQNISAGVMLGINP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + +I+G LA+ LGI GD + ++ P
Sbjct: 121 EQYEPLSKYFINVH---QNLLQAGQYRIIMGAKLAQQLGIQSGDTVRLIVPSVRQLTPMG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
G+ S+ L + D +++ Q+A ++G +F+ P +
Sbjct: 178 GMLSQRLFTLVGVFSANSEVDADQFFVNQQDASRLMRYPLGDITGWRLFLTQPLKVASLS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + L +G V DW++R F +
Sbjct: 238 K---QKLPDGTVWKDWRERKGALFQAMQ 262
>gi|168244289|ref|ZP_02669221.1| lipoprotein-releasing system transmembrane protein LolC [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|194450537|ref|YP_002045217.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL476]
gi|198245184|ref|YP_002215920.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|205353049|ref|YP_002226850.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Gallinarum
str. 287/91]
gi|207857276|ref|YP_002243927.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Enteritidis
str. P125109]
gi|194408841|gb|ACF69060.1| lipoprotein-releasing system transmembrane protein LolC [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|197939700|gb|ACH77033.1| lipoprotein-releasing system transmembrane protein LolC [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|205272830|emb|CAR37756.1| ABC transporter integral membrane subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. 287/91]
gi|205336799|gb|EDZ23563.1| lipoprotein-releasing system transmembrane protein LolC [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|206709079|emb|CAR33412.1| ABC transporter integral membrane subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. P125109]
Length = 399
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 102/267 (38%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q ++ L S S + +
Sbjct: 61 GLMPQAILSAEHGSLNPSQMPEKAVNLQGVNRIA----PLTTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S VI+G+ LA LG++ GD+I ++ P
Sbjct: 117 IDPAQKDPLTPYLVNVKQSELQPGKYNVILGEQLAGQLGVNRGDQIRLMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ + + D + +++Q+A ++G +++ +P ++
Sbjct: 177 RLPSQRLFTVIGTFAANSEVDGYEMLVNIQDASRLMRYPAGNITGWRLWLDEPLQVDTLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW++R F
Sbjct: 237 ---QQTLPQGTKWQDWRERKGELFQAV 260
>gi|308186435|ref|YP_003930566.1| lipoprotein releasing system, transmembrane protein [Pantoea vagans
C9-1]
gi|308056945|gb|ADO09117.1| lipoprotein releasing system, transmembrane protein [Pantoea vagans
C9-1]
Length = 399
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 104/267 (38%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GV+A++ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRASDRFGRFVSWLSTIGITLGVLAMVTVLSVMNGFERELEGNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ +I L Q A+ L+ V L S S + +
Sbjct: 61 GLMPQALITSDKGSLNPQQQPADSLNL----QGVSRIAPLTTASVVLQSPHSVSVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S VI+G+ LA LG+ GD++ ++ P
Sbjct: 117 IEPDEKDPLTPFLVNTQQSVLQAGQYNVILGEQLASQLGVKRGDQLRLMVPSVSQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ + + D + ++LQ+A ++G +++ P +++
Sbjct: 177 RVPSQRLFTVAGTYAANSEVDGYQILVNLQDASRVMRYPAGNITGWRLWLDKPLSVDSLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G+V DW++R F
Sbjct: 237 ---QQTLPQGLVWKDWRERKGDLFQAV 260
>gi|304397241|ref|ZP_07379120.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Pantoea sp. aB]
gi|304355390|gb|EFM19758.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Pantoea sp. aB]
Length = 528
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 52/268 (19%), Positives = 104/268 (38%), Gaps = 8/268 (2%)
Query: 2 SIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
S++ + + RY+ + F S++S IG+ +GV+A++ V+SVMNGF ++ +
Sbjct: 129 SMYQPVALFIGLRYMRGRASDRFGRFVSWLSTIGITLGVLAMVTVLSVMNGFERELEGNI 188
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
LG+ +I L Q A L+ L S S + +
Sbjct: 189 LGLMPQALITSDKGSLNPQQQPAASLNLQGVNRIA----PLTTANVVLQSPRSVSVGVML 244
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ + S VI+G+ LA LG+ GD++ ++ P
Sbjct: 245 GINPDEKDPLTPFLVNTQQSVLQPGQYNVILGEQLASQLGVKRGDQLRLMVPSVSQFTPM 304
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKT 240
+ S+ + + D + ++LQ+A ++G +++ P +++
Sbjct: 305 GRVPSQRLFTVAGTYAANSEVDGYQILVNLQDASRVMRYPAGNITGWRLWLDKPLSVDSL 364
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G++ DW++R F
Sbjct: 365 S---QQTLPAGLIWKDWRERKGDLFQAV 389
>gi|292488005|ref|YP_003530882.1| lipoprotein releasing system, transmembrane protein [Erwinia
amylovora CFBP1430]
gi|292899223|ref|YP_003538592.1| lipoprotein releasing system transmembrane protein [Erwinia
amylovora ATCC 49946]
gi|291199071|emb|CBJ46182.1| lipoprotein releasing system transmembrane protein [Erwinia
amylovora ATCC 49946]
gi|291553429|emb|CBA20474.1| Lipoprotein releasing system, transmembrane protein [Erwinia
amylovora CFBP1430]
Length = 414
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 97/267 (36%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +++ R+ R+ +S+ S IS +G+ +GV LI+ +S MNGF ++ R+L
Sbjct: 1 MAGPLSLLLGLRFSRGRRRGGMVSLISAISTLGIALGVAVLIIGLSAMNGFERELNHRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ P +Q + ++ +P V P+++ + S V V+GI
Sbjct: 61 AVVPHGEIEPVNQPFTGWQAMLPKIAQVPGVAAAAPYINFTGLIESG-SKLQAVQVKGID 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S L S G+ +F GK II + +
Sbjct: 120 PQRESRLSALPSYVQGHAWQNFAPGKQQIILGQGVAGSLKLKQGDWLTVMIPNSDAGHKL 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + + L +AQ + V+GI + +P
Sbjct: 180 LQPKRVRLQVAGVLKLSGMLDHSLALVPLDDAQQLLGMGENVTGIAIKTNNPFDAAAVVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + V + W Y + +
Sbjct: 240 QAGEVTRSYVYIRSWISTYGYMYRDIQ 266
>gi|167623548|ref|YP_001673842.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Shewanella halifaxensis HAW-EB4]
gi|167353570|gb|ABZ76183.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella halifaxensis HAW-EB4]
Length = 417
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 60/269 (22%), Positives = 116/269 (43%), Gaps = 2/269 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ S + V WR+ + + N FI+ SF S G+ +GV LIVV+S MNGF +++ R+L
Sbjct: 1 MRSLLAMWVGWRFYLARQSNRFINFISFASTAGIALGVTVLIVVLSAMNGFEKELEHRLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H + P+ +Q I + + +P + PFV Q V + + ++
Sbjct: 61 GVVSHGELIGVNEPIHQWQSIVSDANKVPGITAAAPFVRMQGLVQKVGGFQALTVLGIDI 120
Query: 123 NSDFSYLQNSFSRFYGNVSND-FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
N++ + + +++GK LA++L + +G +++ P +
Sbjct: 121 NTESKVSNIQQFMSAKSWQSLGEQNTNNIVLGKGLAKSLDLKVGQSLSLYMPNINGQSQS 180
Query: 182 MGIRSKSYTVLGM-FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+KS+ + + D Y+ +Q A NL + VSG+ + V D A +
Sbjct: 181 KIGAAKSHRFVVSGIFELGGELDMTTAYIPMQYAAKTLNLGDNVSGVRIKVDDVFAAPRL 240
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ V + DW + + +
Sbjct: 241 IRDLGYSQQQYVYISDWTRTQGHLYQDIQ 269
>gi|83942875|ref|ZP_00955335.1| ABC lipoprotein efflux transporter, inner membrane subunit, LolE
[Sulfitobacter sp. EE-36]
gi|83845883|gb|EAP83760.1| ABC lipoprotein efflux transporter, inner membrane subunit, LolE
[Sulfitobacter sp. EE-36]
Length = 415
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 74/268 (27%), Positives = 123/268 (45%), Gaps = 11/268 (4%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
++AWRYL + R +S+ ++IS IG+ + V ALI ++V +GFR + + +LG N HV
Sbjct: 1 MIAWRYLRARRAEGGVSVMTWISLIGITLAVFALIATLAVRSGFRAEFVDTILGANAHVT 60
Query: 70 IQQK---------YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + DY +A R+ +P V +V P V GQ + + +
Sbjct: 61 VYNMASVDENGVSQTGIPDYTEMAARVAQVPGVTQVAPLVRGQVMANKGQANAGIEIFGI 120
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + + + DF +G+ IG +A+ L + +GD I I+SP G T
Sbjct: 121 EAADLANIPRIANPETADGDLADF--EQGIAIGSGVAQALRVGLGDTIKIISPNGVKTAF 178
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G R Y V +F D D Y+ L EAQ +FN E +EV V++PD+++
Sbjct: 179 GTSPRVNGYEVTYIFSAGRYDIDRTRAYLPLAEAQSFFNREGVADELEVMVENPDSVDDL 238
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCY 268
++ G ++ W+ F S
Sbjct: 239 TVPLLSAAGERGLIWTWRDASGSFLSAL 266
>gi|237706898|ref|ZP_04537379.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia sp. 3_2_53FAA]
gi|226898108|gb|EEH84367.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia sp. 3_2_53FAA]
Length = 436
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 101/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 38 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 97
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q + L S S + +
Sbjct: 98 GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVA----PITTGDVVLQSARSVAVGVMLG 153
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ VI+G+ LA LG++ GD+I ++ P
Sbjct: 154 IDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 213
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + +++++A ++G +++ +P ++
Sbjct: 214 RIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 273
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW+ R F
Sbjct: 274 ---QQKLPEGSKWQDWRDRKGELFQAV 297
>gi|163751454|ref|ZP_02158678.1| lipoprotein releasing system transmembrane protein LolE [Shewanella
benthica KT99]
gi|161328668|gb|EDP99817.1| lipoprotein releasing system transmembrane protein LolE [Shewanella
benthica KT99]
Length = 410
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 61/271 (22%), Positives = 112/271 (41%), Gaps = 5/271 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +RY + + N F S +F + G+++GV ALI+V SVMNG + +R+L
Sbjct: 1 MNLALSSHIGFRYWHARKANGFASFITFFAVSGILLGVAALIIVSSVMNGLEGQLKQRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G + + P+ +Q L +P VI V P ++ QA + S+ + +
Sbjct: 61 GAVPQLTVHSTA-PIEQWQSKITELSKLPGVIGVTPSIANQAMIQSRSNISAIQVYGIYP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + L F G+ +++G LAR L +S GDK+ +LS G +
Sbjct: 120 DFEHDLLATMQRSFNGSFEQLEAGQYRIVLGSLLARRLDVSSGDKVRLLSGEGVIYSPLG 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFN-LENAVSGIEVFVKDPDAIEKTH 241
+ S+ V+ D + Y+ ++AQ V + ++ DP
Sbjct: 180 PVPSQRNFVVAGVFEMGSQVDANLAYVHYEDAQRLMRQKPGEVKHLRFYLDDPFNAANLS 239
Query: 242 ENIVRILGNG---VVVIDWQQRYQIFFSCYE 269
+++ V DW++ Y F +
Sbjct: 240 ADVIAEFSKDNLKVTTSDWRETYGHLFGAVK 270
>gi|42521026|ref|NP_966941.1| hypothetical protein WD1229 [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|42410767|gb|AAS14875.1| conserved hypothetical protein [Wolbachia endosymbiont of
Drosophila melanogaster]
Length = 409
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 81/268 (30%), Positives = 132/268 (49%), Gaps = 6/268 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ FE+ +A YL + F SI + S IG+ +GV LIVVMSVMNGFR ++ +L
Sbjct: 1 MSIAFEITMAACYLRARNAR-FCSIMTLFSIIGIALGVATLIVVMSVMNGFRAKLLDSIL 59
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
GI+GH+ + DY ++ ++ IP ++K P + Q + V+ +
Sbjct: 60 GIDGHINVYFDRNINSDYYAVSKSIERIPGILKATPMTNDQVIIVANGKIAGSVVRGVST 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G+V +G+IIG LA L I GD+I +S +G
Sbjct: 120 KDLLDSTAVTNNVIIGDV---KKFNEGIIIGARLAEVLNIDYGDEITFISSEEFDALLGE 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K Y V+ +F M +YDN ++YM L+ AQ +F+ +N++ IEV V D +K +
Sbjct: 177 MPRMKKYKVIAIFDMGMFEYDNTLIYMPLKSAQAFFSYKNSIKNIEVLVDDVTRADKLAD 236
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYES 270
I + +G + WQ + +FS ++
Sbjct: 237 AIEKEIG--MEAESWQSQQSHYFSALKT 262
>gi|331672631|ref|ZP_08373420.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli TA280]
gi|331070274|gb|EGI41640.1| lipoprotein-releasing system transmembrane protein LolC
[Escherichia coli TA280]
Length = 436
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 101/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 38 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 97
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q + L S S + +
Sbjct: 98 GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVA----PITTGDVVLQSARSVAVGVMLG 153
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ VI+G+ LA LG++ GD+I ++ P
Sbjct: 154 IDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 213
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + +++++A ++G +++ +P ++
Sbjct: 214 RIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 273
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW+ R F
Sbjct: 274 ---QQKLPEGSKWQDWRDRKGELFQAV 297
>gi|297171074|gb|ADI22086.1| ABC-type transport system, involved in lipoprotein release,
permease component [uncultured Planctomycetales
bacterium HF0200_11L05]
Length = 414
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 68/270 (25%), Positives = 113/270 (41%), Gaps = 8/270 (2%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
S + +A +YL R F+S S F+GV +GV LI+V SVMNGF +++ +RVL
Sbjct: 1 MSSLPLYIAIKYLRGKRS-GFLSFVSSAGFVGVALGVAVLILVSSVMNGFEKELRERVLQ 59
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
H I Q + I + G S G+ + G++
Sbjct: 60 SIPHASIIGGIEIDRVPQ--VRDILLENKEIVASSPYIESQGLIGSSESLKGIYIFGVNP 117
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKG-VIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + R + K +++G LA LGI IGD +N+L P ++ G+
Sbjct: 118 NLENEVSIVGKRIIEGSWKSIEEEKYGIVVGDILAYQLGIGIGDMVNVLFPDTTLSLAGI 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R+K + V G+F + P+ D Y+++ AQ L++ V GI + KD +
Sbjct: 178 LPRTKRFKVTGIFSIGAPEMDQSFAYINIINAQKLLRLDDTVHGIRIRYKDLFQAPQMVH 237
Query: 243 ----NIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + L + +W Y F
Sbjct: 238 LDTIRVNQALNSYYSSSNWTNTYGTLFKAI 267
>gi|317047731|ref|YP_004115379.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Pantoea sp. At-9b]
gi|316949348|gb|ADU68823.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Pantoea sp. At-9b]
Length = 399
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 102/267 (38%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GV+AL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRASDRFGRFVSWLSTIGITLGVLALVTVLSVMNGFERELEGNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ + Q L+ V L S + + +
Sbjct: 61 GLMPQALVTSDKGSINPQQLTPQSLNL----QGVTRIAPLTTADVVLQSAHNVSVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + S VI+G+ LA LG+ GD++ ++ P
Sbjct: 117 INPDEKDPLTPYLVNTQQSVLQAGQYNVILGEQLAGQLGVKRGDQLRLMVPSVSQFTPVG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ + + D + ++ Q+A ++G +++ P ++
Sbjct: 177 RVPSQRIFTVAGTYAANSEVDGYQILVNQQDASRVMRYPLGNITGWRLWLDKPLNVDALS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L +G+V DW++R F
Sbjct: 237 ---QQKLADGLVWKDWRERKGDLFQAV 260
>gi|104782718|ref|YP_609216.1| lipoprotein releasing system transmembrane protein LolC
[Pseudomonas entomophila L48]
gi|95111705|emb|CAK16429.1| lipoprotein releasing system transmembrane protein LolC
[Pseudomonas entomophila L48]
Length = 416
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 73/268 (27%), Positives = 124/268 (46%), Gaps = 3/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RY + R+N F+S S S IG+ +GV+ +IVV+SVMNGF +M RVL
Sbjct: 1 MFRPLFVFIGTRYTRAKRRNHFVSFISLTSMIGLALGVVVMIVVLSVMNGFDHEMRTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H + + P+ D+Q +A+++ P V+ V PF Q ++ +L
Sbjct: 61 GMIPHATL-ETGQPIDDWQALASKVKQNPQVLAVAPFTQMQGLLTHEGKVQKVLLNGVDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G++ G++IG A+ LG+ IGDK+ ++P VTP GM
Sbjct: 120 AREREVSIIDKFVLDGSLDKLAPGEWGIMIGDKAAQKLGVGIGDKLTFVAPEVSVTPAGM 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
R K +TV+G F + + D + +L + + + V G+ + D +
Sbjct: 180 FPRMKRFTVVGTFHVGAGEIDGYLGLTNLSDLSRLHRWKADQVQGLRLKFDDLFQAPRAA 239
Query: 242 ENIVRILG-NGVVVIDWQQRYQIFFSCY 268
+I + LG DW + + +
Sbjct: 240 WDIAQQLGEQQFYPRDWTRTHGNLYQAI 267
>gi|307131509|ref|YP_003883525.1| outer membrane-specific lipoprotein ABC transporter membrane
protein [Dickeya dadantii 3937]
gi|306529038|gb|ADM98968.1| outer membrane-specific lipoprotein transporter subunit; membrane
component of ABC superfamily [Dickeya dadantii 3937]
Length = 400
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 103/267 (38%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSAIGITLGVMALVTVLSVMNGFERELENSIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ +I L ++ L + + ++ P L S S + +
Sbjct: 61 GLMPQAIITTPQGSLNPQTLPSSSLSSLKGISRIAP---LTTGDVVLQSARSVAVGVMLG 117
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++ VI+G+ LA LG+ GD++ ++
Sbjct: 118 VNPDEQEPLANYLVNTHLQQLQPGQYQVILGEQLASQLGVKPGDQLRLMVTSASQLTPMG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ + + D + ++ Q+A ++G +++ P ++
Sbjct: 178 RVPSQRLFTVAGTFSARSEVDGYQLLVNQQDASRLMRYPLGNITGWRLWLNQPLTVDTLS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW++R F
Sbjct: 238 ---QQALPPGTAWKDWRERKGELFQAV 261
>gi|156934398|ref|YP_001438314.1| outer membrane-specific lipoprotein transporter subunit LolC
[Cronobacter sakazakii ATCC BAA-894]
gi|156532652|gb|ABU77478.1| hypothetical protein ESA_02229 [Cronobacter sakazakii ATCC BAA-894]
Length = 399
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 100/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GV+AL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVLALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ +I + Q A+ L L S S + +
Sbjct: 61 GLMPQALISSSKGSVNPQQLPADSLHLQGVNRIA----PLTTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ N +I+G+ LA LG+ GD++ ++ P
Sbjct: 117 IDPAQRDPLTPYLVNVNQQALAAGKYNIILGEQLAGQLGVKRGDQLRLMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ + + D + +++Q+A ++G +++ +P ++
Sbjct: 177 RLPSQRLFTVIGTFAANSEVDGYQMLVNIQDASRLMRYPAGNITGWRLWLNEPLKVDTLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW++R F
Sbjct: 237 ---QQTLPPGTQWQDWRERKGELFQAV 260
>gi|83954045|ref|ZP_00962765.1| ABC lipoprotein efflux transporter, inner membrane subunit, LolE
[Sulfitobacter sp. NAS-14.1]
gi|83841082|gb|EAP80252.1| ABC lipoprotein efflux transporter, inner membrane subunit, LolE
[Sulfitobacter sp. NAS-14.1]
Length = 415
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 74/268 (27%), Positives = 123/268 (45%), Gaps = 11/268 (4%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
++AWRYL + R +S+ ++IS IG+ + V ALI ++V +GFR + + +LG N HV
Sbjct: 1 MIAWRYLRARRAEGGVSVMTWISLIGITLAVFALIATLAVRSGFRAEFVDTILGANAHVT 60
Query: 70 IQQK---------YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + DY +A R+ +P V +V P V GQ + + +
Sbjct: 61 VYNMASVDENGVSQTGIPDYTEMAARVAQVPGVTQVAPLVRGQVMANKGQANAGIEIFGI 120
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + + + DF +G+ IG +A+ L + +GD I I+SP G T
Sbjct: 121 EAADLANIPRIANPETADGDLADF--EQGIAIGSGVAQALRVGLGDTIKIISPNGVKTAF 178
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G R Y V +F D D Y+ L EAQ +FN E +EV V++PD+++
Sbjct: 179 GTSPRVNGYEVTYIFSAGRYDIDRTRAYLPLAEAQSFFNREGVADELEVMVENPDSVDDL 238
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCY 268
++ G ++ W+ F S
Sbjct: 239 TVPLLSAAGERGLIWTWRDASGSFLSAL 266
>gi|308050220|ref|YP_003913786.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Ferrimonas balearica DSM 9799]
gi|307632410|gb|ADN76712.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Ferrimonas balearica DSM 9799]
Length = 408
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 54/268 (20%), Positives = 111/268 (41%), Gaps = 10/268 (3%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
+ V RY + + F+S + S +G+ +GV ALI+V SVMNG + ++LG
Sbjct: 7 SLSLFVGLRYWRARKDTRFVSFITLFSVLGIALGVAALIIVSSVMNGLEGRLKGKILGAV 66
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+VI+ P+ ++ L P + +P ++ +A V S G L+ +++
Sbjct: 67 PQLVIEAGEGPISRFE---PLLQGDPRIRGAVPMLTSEAMVQRGSELGGVQLLGIDPDTE 123
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ YG + + +I+G LAR L + GD++ +++ G +
Sbjct: 124 TPLSVVTSHMLYGQLKDLSPGDYHIILGSQLARRLNVLPGDRVRVMTAQGARYTPMGRVP 183
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ + D D + ++L +A+ + +++ D +
Sbjct: 184 AQRQFTVAGVFELGSDIDKALALVNLSDAERLLRQSPD---LRLYLNDAFDAPLLSAELA 240
Query: 246 ----RILGNGVVVIDWQQRYQIFFSCYE 269
+ LG + + DW+ +Y FS +
Sbjct: 241 AKAPQQLGETLTLTDWRSQYGQLFSAVK 268
>gi|117623301|ref|YP_852214.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli APEC O1]
gi|115512425|gb|ABJ00500.1| ABC transporter integral membrane subunit [Escherichia coli APEC
O1]
Length = 434
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 101/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 36 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 95
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q + L S S + +
Sbjct: 96 GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVA----PITTGDVVLQSARSVAVGVMLG 151
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ VI+G+ LA LG++ GD+I ++ P
Sbjct: 152 IDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 211
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + +++++A ++G +++ +P ++
Sbjct: 212 RIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS 271
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW+ R F
Sbjct: 272 ---QQKLPEGSKWQDWRDRKGELFQAV 295
>gi|71280515|ref|YP_270151.1| lipoprotein releasing system transmembrane protein LolE [Colwellia
psychrerythraea 34H]
gi|71146255|gb|AAZ26728.1| lipoprotein releasing system transmembrane protein LolE [Colwellia
psychrerythraea 34H]
Length = 422
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 49/274 (17%), Positives = 96/274 (35%), Gaps = 7/274 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + WRY+ N F + S S IG+ +GV LIVV+S MNGF ++ +++L
Sbjct: 1 MFKPLSIFLGWRYVRGRHGNGFSAFISASSTIGIALGVTVLIVVLSAMNGFERELSEKLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
I HV + P+ D+ +++ VI P + + + + +
Sbjct: 61 SIVPHVELVSVNEPIKDWPKSIEKVEIESSVIAAAPVIKMTGMLQHGLKLKAVEVRGVDA 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVI-------IGKDLARNLGISIGDKINILSPYG 175
+ G + L+ LG I +
Sbjct: 121 KLEKQVSSIDDYIIAGEWQALMASELNENTIVIGSGVATKLSVELGDKIQLLLPPPGGSN 180
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD 235
DV + ++ V+G+F+ + +++ EN I + V D
Sbjct: 181 DVKQVFSAPITRQVEVVGIFKFGGTVDETLAYIPLTLASEVMGYKENETQSIRLKVTDVF 240
Query: 236 AIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ K + + V + +W + F+ +
Sbjct: 241 SAPKIARQVAYNFDHYVYINNWTRTQGHLFNDIQ 274
>gi|163751456|ref|ZP_02158680.1| lipoprotein releasing system transmembrane protein LolC, putative
[Shewanella benthica KT99]
gi|161328670|gb|EDP99819.1| lipoprotein releasing system transmembrane protein LolC, putative
[Shewanella benthica KT99]
Length = 419
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 57/271 (21%), Positives = 105/271 (38%), Gaps = 4/271 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + V WR+ + + N+FIS SF S G+ +GV LIVV+S MNGF ++ R+L
Sbjct: 1 MNRLLSIWVGWRFYRARQSNSFISFISFASTAGIALGVAVLIVVLSAMNGFERELENRLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H + P+ +Q IAN IP ++ PF+ Q V ++ +
Sbjct: 61 GVVAHGELTGVNEPIAHWQNIANDAAKIPGILASAPFIRLQGLVQKPGGFQGLSILGIDT 120
Query: 123 -NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ + F +++GK LA +L +S GD +++ P
Sbjct: 121 EKEQKVSVISDFMSKETWSKLAKGDENNIVLGKGLADSLDLSAGDSLSLYMPDVSHQSRE 180
Query: 182 MGIR---SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
V+ + D Y+ ++ A + VSG+ + V+
Sbjct: 181 STRIASAKSHRFVVAGVFELGGELDLTTAYIPMKYAASILGMGQGVSGVRIKVEQVFEAP 240
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + + DW + + +
Sbjct: 241 RLIRELGYSQDQYLYLSDWTRTQGNLYQDIQ 271
>gi|168822322|ref|ZP_02834322.1| lipoprotein-releasing system transmembrane protein LolC [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|205341213|gb|EDZ27977.1| lipoprotein-releasing system transmembrane protein LolC [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|320086343|emb|CBY96116.1| Macrolide export ATP-binding/permease protein macB [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
Length = 399
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 102/267 (38%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q ++ L S S + +
Sbjct: 61 GLMPQAILSAEHGSLNPNQMPEKAVNLQGVNRIA----PLTTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S VI+G+ LA LG++ GD+I ++ P
Sbjct: 117 IDPAQKDPLTPYLVNVKQSELQPGKYNVILGEQLAGQLGVNRGDQIRLMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ + + D + +++Q+A ++G +++ +P ++
Sbjct: 177 RLPSQRLFTVIGTFAANSEVDGYEMLVNIQDASRLMRYPAGNITGWRLWLDEPLQVDTLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW++R F
Sbjct: 237 ---QQPLPQGTKWQDWRERKGELFQAV 260
>gi|271500157|ref|YP_003333182.1| lipoprotein releasing system transmembrane protein [Dickeya
dadantii Ech586]
gi|270343712|gb|ACZ76477.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Dickeya dadantii Ech586]
Length = 401
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 109/267 (40%), Gaps = 6/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSAIGITLGVMALVTVLSVMNGFERELENSIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ +I L A L + + ++ P +G + S GV++
Sbjct: 61 GLMPQALITTPQGSLNPQTLSAASLSGLTGIRRIAPLTTGDVVLQSARSVAVGVMLGVNP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++ VI+G+ LA LG+ GD++ ++
Sbjct: 121 DEQEPLAN--YLTHGASLQQLQPGQYQVILGEQLANQLGVKPGDQLRLMVTSASQLTPMG 178
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ + + D + ++ Q+A + ++G +++ P A++
Sbjct: 179 RVPSQRLFTVVGTFYAHSEVDGYQLLVNQQDASRLMHYPLGNITGWRLWLDQPLAVDTLS 238
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L +G V DW++R F
Sbjct: 239 ---QQALPSGTVWKDWRERKGELFQAV 262
>gi|313676697|ref|YP_004054693.1| hypothetical protein Ftrac_2607 [Marivirga tractuosa DSM 4126]
gi|312943395|gb|ADR22585.1| protein of unknown function DUF214 [Marivirga tractuosa DSM 4126]
Length = 408
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 47/271 (17%), Positives = 103/271 (38%), Gaps = 5/271 (1%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+A RY S +K FI++ S I+ +GV IG AL++V+SV NG + +
Sbjct: 1 MKNLSFFIARRYFLSKKKKGFINVLSIIAMVGVAIGTAALVIVLSVFNGLEDLIRSLYSS 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ + I +Y + + + + V + + G S V ++G+S
Sbjct: 61 FDADIKISLNEGKFFEYDDELQKAIEESEGLATIVQVVEDNVLVRYNDGESVVRMKGVSP 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ G + ++G+ + +L I+ + L Y
Sbjct: 121 EFVKNSRLKNHITEGQLKLTEKEQNFAVVGQGIRYDLSINSRNDFLALQFYYPKNISPGR 180
Query: 184 IRSKSYTVLGMF-----RMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
S G+ YD +++ ++ A+ +N + IE+ + +I+
Sbjct: 181 TNPSSMYNSGILMPAGVFAIEKQYDEKYIFVPIRFARKLIGKKNECTSIEINLDAGVSID 240
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ E++ + LG+ V++ +++ +
Sbjct: 241 QVQESLQKDLGDEFEVLNSDEQHASLLKAIK 271
>gi|90408100|ref|ZP_01216270.1| Lipoprotein releasing system transmembrane protein LolE
[Psychromonas sp. CNPT3]
gi|90310786|gb|EAS38901.1| Lipoprotein releasing system transmembrane protein LolE
[Psychromonas sp. CNPT3]
Length = 414
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 102/267 (38%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RY KN F+S S S +G+ +GVMALIV +S MNGF + + ++L
Sbjct: 1 MFRPLSVFIGTRYSMVKNKNTFVSFISIASILGIALGVMALIVGLSAMNGFEKALRDQLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + Q + ++ P V F+ A + + + +
Sbjct: 61 SVVPHGELSTVDGSFKHLQRSLSIVENNPGVEAASAFIKLDALLEHNNKMQALQIRAITP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
++ G +I+GK +A+ L + +GD + +L P +
Sbjct: 121 ETESKVTHIERFIEQGGWQLLQKDKYTIILGKSVAKKLALEVGDSLLLLLPQQGASNRLK 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R + ++G+F D+ + ++ + A+ L N + I V +K
Sbjct: 181 SPRKIRFKLVGLF-SMGGQLDSKLAFIHIDNAKKILGL-NNANAIAFRVNKILDAQKIAR 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L + + W F+ +
Sbjct: 239 QVAYELNEYLYINSWITTQGSFYQDIK 265
>gi|170726166|ref|YP_001760192.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Shewanella woodyi ATCC 51908]
gi|169811513|gb|ACA86097.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella woodyi ATCC 51908]
Length = 416
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 61/272 (22%), Positives = 112/272 (41%), Gaps = 5/272 (1%)
Query: 2 SIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
++ + +RY + + NAF S +F + G+++GV ALI+V SVMNG + +R+
Sbjct: 6 TMNFALSAHIGFRYWRARKANAFASFITFFAVSGILLGVAALIIVSSVMNGLEGQLKQRI 65
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
LG + + + + L +P V+ P ++ QA V S+ + +
Sbjct: 66 LGAVPQLTVNSEQALTH-WHANVAELKTLPGVLAATPSIATQAMVQSPSNISAIQVYGIY 124
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ + S +I+G +LAR L +SIG+K+ +LS G V
Sbjct: 125 PEYEKVLEGKMQGVLNAHFSQLIPGKYRIILGSELARRLDVSIGEKVRVLSAEGVVYSPF 184
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKT 240
+ S+ V+ D + Y+ ++AQ + + +++ DP E
Sbjct: 185 GPVPSQRKFVVAGIFEMGSQVDASLAYVHYEDAQRLMRQPPGEIKHLRLYLADPFNAESL 244
Query: 241 HENIVRIL---GNGVVVIDWQQRYQIFFSCYE 269
+ + G V DW+ Y FS +
Sbjct: 245 SSEVTNLFKRQGIEVTTSDWRDTYGHLFSAVK 276
>gi|329297176|ref|ZP_08254512.1| outer membrane-specific lipoprotein transporter subunit LolC
[Plautia stali symbiont]
Length = 399
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 48/267 (17%), Positives = 100/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GV+AL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRASDRFGRFVSWLSTIGITLGVLALVTVLSVMNGFERELEGNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ + Q A L V L S + + +
Sbjct: 61 GLMPQALVTSDTGSINPQQMRAQDLKL----QGVTRIAPLTTADVVLQSAHNVSVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + S VI+G+ LA LG+ GD++ ++ P
Sbjct: 117 INPDEPDPLTPYLVNTQQSVLQPGQYKVILGELLASQLGVKRGDQLRLMVPSVSQFTPVG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ + + + D ++ ++ Q+A ++G +++ P ++
Sbjct: 177 RVPIQRIFTVAGTYAANSEVDGYLILVNQQDASRVMRYPLGNITGWRLWLDKPLNVDALS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G+ DW++R F
Sbjct: 237 ---QQPLPQGLTWKDWRERKGDLFQAV 260
>gi|46204233|ref|ZP_00050294.2| COG4591: ABC-type transport system, involved in lipoprotein
release, permease component [Magnetospirillum
magnetotacticum MS-1]
Length = 386
Score = 123 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 89/242 (36%), Positives = 138/242 (57%), Gaps = 1/242 (0%)
Query: 28 ASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRL 87
+ S +G+ +GV LI+V+SVMNGFR ++ +++G+NGHV DY +++RL
Sbjct: 2 VALFSVLGIAVGVATLIIVLSVMNGFRSELRSKIIGLNGHVFAAPIDKLFTDYVDLSDRL 61
Query: 88 DFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRG 147
+ + V V+P V GQAF S G SGVLVRG+ +D + S FD G
Sbjct: 62 EKVAGVRAVVPMVQGQAFASSPYGG-SGVLVRGVRAADLPKIPAVSSAIKSGTLEGFDDG 120
Query: 148 KGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMV 207
+GV +GK LA +LG+ GD++ + +P G TP G R+K+YTV +F + D+D+ M
Sbjct: 121 QGVALGKRLADSLGLQAGDQVTLSTPKGASTPFGTAPRTKAYTVKAIFEIGVTDFDSTMA 180
Query: 208 YMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSC 267
+M L E+Q +FN + VS IE+++ D D + + E + V++ DW+Q + FF
Sbjct: 181 FMPLSESQAFFNRDGDVSVIEIYLDDADTVGEMREPLEMAAERPVLLTDWRQTNRTFFGA 240
Query: 268 YE 269
E
Sbjct: 241 LE 242
>gi|152969667|ref|YP_001334776.1| outer membrane-specific lipoprotein transporter subunit LolC
[Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|238894150|ref|YP_002918884.1| outer membrane-specific lipoprotein transporter subunit LolC
[Klebsiella pneumoniae NTUH-K2044]
gi|262043182|ref|ZP_06016318.1| lipoprotein releasing system [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|329999624|ref|ZP_08303458.1| lipoprotein-releasing system transmembrane protein LolC [Klebsiella
sp. MS 92-3]
gi|150954516|gb|ABR76546.1| transport protein of outer membrane lipoproteins (ABC superfamily,
membrane) [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|238546466|dbj|BAH62817.1| ABC transport system integral membrane subunit [Klebsiella
pneumoniae subsp. pneumoniae NTUH-K2044]
gi|259039460|gb|EEW40595.1| lipoprotein releasing system [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328538271|gb|EGF64414.1| lipoprotein-releasing system transmembrane protein LolC [Klebsiella
sp. MS 92-3]
Length = 402
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 51/267 (19%), Positives = 98/267 (36%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 4 MYQPAALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 63
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ K + Q V L S S + +
Sbjct: 64 GLMPQAILSAKQGSVNPQQLPEREAKLN----GVTRVAPITTGDVVLQSARSVAVGVMLG 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S+ VI+G+ LA LG++ GDKI ++ P
Sbjct: 120 IDPAQNDPLTPYLVNVKQSDLQAGKYNVILGEQLAGQLGVNRGDKIRVMVPSASQFTPMG 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ + + D + ++ +A ++G +++ P ++
Sbjct: 180 RVPSQRLFTVIGTFAANSEVDGYQMLTNIDDASRLMRYPLGNITGWRLWLDKPLQVDTLS 239
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW++R F
Sbjct: 240 ---QQTLPPGTQWQDWRERKGELFQAV 263
>gi|260772488|ref|ZP_05881404.1| lipoprotein releasing system transmembrane protein LolC [Vibrio
metschnikovii CIP 69.14]
gi|260611627|gb|EEX36830.1| lipoprotein releasing system transmembrane protein LolC [Vibrio
metschnikovii CIP 69.14]
Length = 402
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 61/267 (22%), Positives = 107/267 (40%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RYL + F S++S G+ IGVMAL+ V+SVMNGF + R+L
Sbjct: 1 MFHPISIFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMALVTVLSVMNGFESQLKNRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ VI Q + + + P V +A V +G+LV
Sbjct: 61 GVLPQAVIGQAQEKTQWQAQAPDFIRELSTYKAPQPMVRSEAVVQSSWQLSAGLLVGIAP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+D + G +S+ + +G LAR+L +S+GD + ++
Sbjct: 121 QADD---PIADYLIAGRLSDLQPGAYHIFLGHTLARDLNVSVGDTVRLMVTRASQFTPLG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTH 241
I S+ + D D ++ L++A ++ +SG +F+ DP +
Sbjct: 178 RIPSQRNFTVAGLFNTGSDVDGQLMITHLRDAGRLLRFDDQTISGWRLFMADPFDVATLS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
L +G DW+++ F
Sbjct: 238 ---TTSLPDGWYWSDWREQRGELFQAV 261
>gi|289829625|ref|ZP_06547180.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Typhi str.
E98-3139]
Length = 313
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 102/267 (38%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q ++ L S S + +
Sbjct: 61 GLMPQAILSAEHGSLNPNQMPEKAVNLQGVNRIA----PLTTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S VI+G+ LA LG++ GD+I ++ P
Sbjct: 117 IDPAQKDPLTPYLVNVKQSELQPGKYNVILGEQLAGQLGVNRGDQIRLMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ + + D + +++Q+A ++G +++ +P ++
Sbjct: 177 RLPSQRLFTVIGTFAANSEVDGYEMLVNIQDASRLMRYPAGNITGWRLWLDEPLQVDTLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW++R F
Sbjct: 237 ---QQTLPQGTKWQDWRERKGELFQAV 260
>gi|86146943|ref|ZP_01065261.1| hypothetical protein MED222_19614 [Vibrio sp. MED222]
gi|85835193|gb|EAQ53333.1| hypothetical protein MED222_19614 [Vibrio sp. MED222]
Length = 402
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 64/267 (23%), Positives = 111/267 (41%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + V RYL + F S++S G+ IGV++L+ V+SVMNGF + R+L
Sbjct: 1 MFHPISLFVGLRYLKGRSGDRFSRFVSYMSTAGITIGVLSLVTVLSVMNGFEAQLKDRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ V+ ++ + + + V P V +A + + +G+L+
Sbjct: 61 GVLPQAVVYEQGGTTSLSAQAPSFAEQMSLNGHVEPIVRSEAVIQSPAQLSAGLLIGIEP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM-G 181
NSD G +S+ + +G LARNL +S+GDK+ ++ G
Sbjct: 121 NSDD---PLQNHLIAGRLSSLKAGQYQLFLGHTLARNLKVSMGDKVRLMVTSASQYTPLG 177
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+++TV G+F MV +L + +SG +F DP + +
Sbjct: 178 RIPSQRNFTVAGIFNTGSDIDAQLMVTDINDAGRLMRYKSDTISGWRLFFDDPFEVAELS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G V DW+ + F
Sbjct: 238 N---QPLPEGWVWSDWRDQRGELFQAV 261
>gi|260776193|ref|ZP_05885088.1| lipoprotein releasing system transmembrane protein LolC [Vibrio
coralliilyticus ATCC BAA-450]
gi|260607416|gb|EEX33681.1| lipoprotein releasing system transmembrane protein LolC [Vibrio
coralliilyticus ATCC BAA-450]
Length = 401
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 56/267 (20%), Positives = 105/267 (39%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RYL + F S++S G+ IGVM+L+ V+SVMNGF + R+L
Sbjct: 1 MFHPVSTFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKGRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ + Y I + + P V +A + + +G+L+
Sbjct: 61 GVLPQAIV-SEADSKTPYTAIPDFAKQLSTAAHPEPIVQSEAVIQSSDNLSAGLLIGIKP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G +S+ V IG LAR + +S+GDK+ ++
Sbjct: 120 SDHD---PIESHLIAGRLSSLQAGKYQVFIGHTLARAMDVSLGDKVRLMVTSASQFTPLG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFN-LENAVSGIEVFVKDPDAIEKTH 241
I S+ + D D ++ + +A ++ ++G +F DP + +
Sbjct: 177 RIPSQRIFTVAGIYNTGSDVDGQLMLTHIDDAARLLRFKKDTITGWRLFFDDPFVVGELS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + L G DW+ + F
Sbjct: 237 K---QPLPEGWQWQDWRDQRGELFQAV 260
>gi|218710047|ref|YP_002417668.1| lipoprotein-releasing system transmembrane protein LolC [Vibrio
splendidus LGP32]
gi|218323066|emb|CAV19243.1| Lipoprotein-releasing system transmembrane protein lolC [Vibrio
splendidus LGP32]
Length = 406
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 65/268 (24%), Positives = 112/268 (41%), Gaps = 7/268 (2%)
Query: 2 SIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
S+F + V RYL + F S++S G+ IGV++L+ V+SVMNGF + R+
Sbjct: 4 SMFHPISLFVGLRYLKGRSGDRFSRFVSYMSTAGITIGVLSLVTVLSVMNGFEAQLKDRI 63
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
LG+ V+ ++ + + + V P V +A + + +G+L+
Sbjct: 64 LGVLPQAVVYEQGGTTSLSAQAPSFAEQMSLNGHVEPIVRSEAVIQSPAQLSAGLLIGIE 123
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM- 180
NSD G +S+ + +G LARNL +S+GDK+ ++
Sbjct: 124 PNSDD---PLQNHLIAGRLSSLKAGQYQLFLGHTLARNLKVSMGDKVRLMVTSASQYTPL 180
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G +++TV G+F MV +L + +SG +F DP + +
Sbjct: 181 GRIPSQRNFTVAGIFNTGSDIDAQLMVTDINDAGRLMRYKSDTISGWRLFFDDPFEVAEL 240
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G V DW+ + F
Sbjct: 241 SN---QPLPEGWVWSDWRDQRGELFQAV 265
>gi|77460080|ref|YP_349587.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas fluorescens Pf0-1]
gi|77384083|gb|ABA75596.1| putative lipoprotein releasing system, membrane protein
[Pseudomonas fluorescens Pf0-1]
Length = 416
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 75/268 (27%), Positives = 121/268 (45%), Gaps = 3/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RY + R+N F+S S S IG+ +GV+ +IVV+SVMNGF +M RVL
Sbjct: 1 MFRPLFVFIGTRYTRAKRRNHFVSFISLTSMIGLALGVVVMIVVLSVMNGFDHEMRTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I+ + D+ +A ++ P V V PF Q ++ +L
Sbjct: 61 GMVPHATIESGE-AINDWPSLAAKVKQNPQVAAVAPFTQMQGLLTNNGQVSKVLLNAIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G + + G++IG A LG+ IGDKI ++P VTP GM
Sbjct: 120 ALERNVSIIDNFMKQGKLDDLTPGSFGIVIGDKAATKLGVGIGDKITFVAPEVSVTPAGM 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLENAVSGIEVFVKDPDAIEKTH 241
R K +TV+G+F + + D + +LQ+ + V G+ + D +
Sbjct: 180 FPRMKRFTVVGIFHVGAGELDGYLGVTNLQDLAKMHRWKPDQVQGLRLKFDDLFQAPREA 239
Query: 242 ENIVRILGNG-VVVIDWQQRYQIFFSCY 268
NI + LG DW + + +
Sbjct: 240 WNIAQRLGEDRYYARDWTRTHGNLYQAI 267
>gi|312172129|emb|CBX80386.1| Lipoprotein releasing system, transmembrane protein [Erwinia
amylovora ATCC BAA-2158]
Length = 414
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 97/267 (36%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +++ R+ R+ +S+ S IS +G+ +GV LI+ +S MNGF ++ R+L
Sbjct: 1 MAGPLSLLLGLRFSRGRRRGGMVSLISAISTLGIALGVAVLIIGLSAMNGFERELNHRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ P +Q + ++ +P V P+++ + S V V+GI
Sbjct: 61 AVVPHGEIEPVNQPFTGWQAMLPKIAQVPGVAAAAPYINFTGLIESG-SKLQAVQVKGID 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S L S G+ +F GK II + +
Sbjct: 120 PQRESRLSALPSYVQGHAWQNFAPGKQQIILGQGVAGSLKLKQGDWLTVMIPNSDAGHKL 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + + L +AQ + V+GI + +P
Sbjct: 180 LQPKRVRLQVAGVLKLSGMLDHSLALVPLDDAQQLLGMGENVTGIAIKTNNPFDAAAVVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + V + W Y + +
Sbjct: 240 QAGEVTRSYVYIRSWISTYGYMYRDIQ 266
>gi|260597487|ref|YP_003210058.1| outer membrane-specific lipoprotein transporter subunit LolC
[Cronobacter turicensis z3032]
gi|260216664|emb|CBA30000.1| Lipoprotein-releasing system transmembrane protein lolC
[Cronobacter turicensis z3032]
Length = 399
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 48/267 (17%), Positives = 100/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GV+AL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVLALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ +I + Q A+ L L S S + +
Sbjct: 61 GLMPQALISSSKGSVNPQQLPADSLHLEGVNRIA----PLTTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ N + +I+G+ LA LG+ GD++ ++ P
Sbjct: 117 IDPAQRDPLTPYLVNVNQQDLAAGKYNIILGEQLAGQLGVKRGDQLRLMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ + + D + +++Q+A ++G +++ +P ++
Sbjct: 177 RLPSQRLFTVIGTFAANSEVDGYQMLVNIQDASRLMRYPAGNITGWRLWLNEPLKVDVLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L DW++R F
Sbjct: 237 ---QQTLPANTQWQDWRERKGELFQAV 260
>gi|329889350|ref|ZP_08267693.1| lipoprotein releasing system, transmembrane protein, LolC/E family
protein [Brevundimonas diminuta ATCC 11568]
gi|328844651|gb|EGF94215.1| lipoprotein releasing system, transmembrane protein, LolC/E family
protein [Brevundimonas diminuta ATCC 11568]
Length = 437
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 82/270 (30%), Positives = 129/270 (47%), Gaps = 4/270 (1%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS +E+ +A RYL + RK +++ + ISFIG+M+ V LI VMS+M GFR ++ R+L
Sbjct: 20 FSSWEIGLALRYLRAKRKQGGVALIAMISFIGIMLAVAVLISVMSIMAGFRGTLMDRILS 79
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
NGH+ +Q D R+ +P V+ V P + A + GV+
Sbjct: 80 FNGHMYVQGPVLYAPDRDAALKRIADVPGVVAVTPLIESPAMFRAGGAATGGVVRGVRPQ 139
Query: 124 S---DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + G V+IGK LA +G+ GD I++ SP G +
Sbjct: 140 DLASTKFVYDSLTPEAREHFGKGQYGGDHVLIGKSLAEQMGLREGDPISLYSPTGADSAF 199
Query: 181 GMGIR-SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
G K+Y V G++ DYD ++M L++AQL+F + IE+ V +PD +E
Sbjct: 200 GNLGGLEKTYIVGGIYTSGAADYDRAFIFMPLEQAQLFFGKDGVWDVIEMKVAEPDLVEN 259
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ R G+G VV DW+ R + +
Sbjct: 260 LLTPVQRAAGSGSVVTDWRNRQAAIWGALK 289
>gi|157375964|ref|YP_001474564.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Shewanella sediminis HAW-EB3]
gi|157318338|gb|ABV37436.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella sediminis HAW-EB3]
Length = 419
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 55/271 (20%), Positives = 104/271 (38%), Gaps = 4/271 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ V WR+ + + N FIS SF S G+ +GV LI+V+S MNGF ++ R+L
Sbjct: 1 MSQLLSFWVGWRFYLARQSNRFISFISFASTAGIALGVAVLIIVLSAMNGFESELETRLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H + P+ +Q IA+ + IP ++ PF+ Q V ++ +
Sbjct: 61 GVVAHAELSGVNEPIHSWQAIADDANKIPGIVAAAPFIRLQGLVQKPGGFQGLSILGIDT 120
Query: 123 NSDFSYLQNSFSRFYGNVSND-FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ + S S +++GK LA +LG+ +GD +++ P
Sbjct: 121 IEEAKVSKISEFMSTSTWSKLAQHDANNIVLGKSLAESLGLDVGDALSLYMPDISGKNRS 180
Query: 182 MGIR---SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+ D Y+ +Q A + + VSG+ + +
Sbjct: 181 GSRIGAAKSYRFTVAGVFELGGSLDLTTAYIPMQYAASILKMGDDVSGVRIKTQQVFDAP 240
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + + DW + + +
Sbjct: 241 RLIRELGYSQEQYLYLNDWTRTQGNLYQDIQ 271
>gi|237731098|ref|ZP_04561579.1| outer membrane-specific lipoprotein transporter subunit LolC
[Citrobacter sp. 30_2]
gi|226906637|gb|EEH92555.1| outer membrane-specific lipoprotein transporter subunit LolC
[Citrobacter sp. 30_2]
Length = 429
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 100/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 31 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 90
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ V+ + L Q + L S S + +
Sbjct: 91 GLMPQAVLSSEQGSLNPQQLPEKAVVLNGVNRVA----PITTGDVVLQSARSVAVGVMLG 146
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ VI+G+ LA LG++ GD+I ++ P
Sbjct: 147 IDPAQKDPLTPYLVNVKQTDLQPGKYNVILGEQLAGQLGVNRGDQIRVMVPSASQFTPMG 206
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ + + D + ++Q+A ++G +++ +P ++
Sbjct: 207 RLPSQRLFTVIGTFAANSEVDGYQMLTNIQDASRLMRYPVGNITGWRLWLNEPLKVDTLS 266
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW++R F
Sbjct: 267 ---QQTLPQGTKWQDWRERKGELFQAV 290
>gi|320540383|ref|ZP_08040033.1| putative outer membrane-specific lipoprotein transporter subunit
[Serratia symbiotica str. Tucson]
gi|320029314|gb|EFW11343.1| putative outer membrane-specific lipoprotein transporter subunit
[Serratia symbiotica str. Tucson]
Length = 400
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 102/267 (38%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMA++ V+SVMNGF +D+ +L
Sbjct: 1 MYQPVALFIGLRYMRGRVSDRFGRFVSWLSTIGITLGVMAMVTVLSVMNGFEKDLENNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ +I K + A + + V V L S S + +
Sbjct: 61 GLMPQALITSKQGSINPQWLPALAVQGLKG---VSRVVPLTTGDVVLQSARSVAVGVMLG 117
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + +IIG+ LA LG+ GD + ++ P
Sbjct: 118 VNPDEADPLTPYLVNIKRQQLQPNHYNIIIGEQLASQLGVKRGDSLRLMVPSTSQFTPMG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D+ + ++ Q+A ++G +F++ P ++
Sbjct: 178 RIPSQRLFTIIGTFHANSEVDSYQLLVNQQDASRLMRYPAGNITGWRLFLQQPLMVDTLS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW++R F
Sbjct: 238 ---QQTLPQGTEWKDWRERKGELFQAV 261
>gi|237797695|ref|ZP_04586156.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. oryzae str. 1_6]
gi|331020545|gb|EGI00602.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. oryzae str. 1_6]
Length = 416
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 74/268 (27%), Positives = 122/268 (45%), Gaps = 3/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RY + R+N F+S S S IG+ +GV+ +IVV+SVMNGF +M RVL
Sbjct: 1 MFRPLFVFIGTRYTRAKRRNHFVSFISLTSMIGLALGVVVMIVVLSVMNGFDHEMRTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I + P+ D++ +A ++ P V+ V PF Q ++ +L
Sbjct: 61 GMVPHATI-ESADPITDWRGLAAKVQENPQVLAVAPFTQMQGLLTHDGKVQKVLLNGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G + + G++IG A LG+ +GDK+ ++P VTP GM
Sbjct: 120 VEERKVSIIDNFIKQGRLDSLSPGSFGIMIGDKAAAKLGVVVGDKLTFVAPEVTVTPAGM 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLENAVSGIEVFVKDPDAIEKTH 241
R K + V G+F + + D + +L + + V G+ + D A +T
Sbjct: 180 FPRMKRFEVTGIFHVGAGEIDGFLGLTNLDDLARLHRWKPHQVQGLRLKFDDLFAAPRTS 239
Query: 242 ENIVRILG-NGVVVIDWQQRYQIFFSCY 268
I + LG N DW + + +
Sbjct: 240 WEIAQKLGENNFYSRDWTRTHGNLYQAI 267
>gi|212712827|ref|ZP_03320955.1| hypothetical protein PROVALCAL_03924 [Providencia alcalifaciens DSM
30120]
gi|212684519|gb|EEB44047.1| hypothetical protein PROVALCAL_03924 [Providencia alcalifaciens DSM
30120]
Length = 415
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 62/268 (23%), Positives = 118/268 (44%), Gaps = 2/268 (0%)
Query: 3 IFS-RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+ + ++ A R+ R+ +S+ S +S +G+++GV LI+ +S MNGF ++ RV
Sbjct: 1 MINMPLTLLAALRFSRGRRRTGMVSLVSIVSTLGIVLGVAVLIIGLSAMNGFERELNNRV 60
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
L + H I P D++F N + P V V P+V+ + ++ + ++
Sbjct: 61 LSVVPHGQIYAVEAPYQDWEFAQNVIRKTPGVQAVSPYVNFTGLLERGANLKAIQIMGVS 120
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
++ + + +I+G+ +A +L + +GD + I+ P D +
Sbjct: 121 HETESQVSALPEFILNDAWQHFEAGKQSIILGQGVANSLNVKVGDWVTIMIPNTDDSMKI 180
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
R V G+FR D+ + + L +AQ Y N +SG E+ KDP +K
Sbjct: 181 QQPRRIRVQVTGIFR-LSGLLDHQLALVPLADAQEYLGYGNGISGFEIKAKDPFEADKVV 239
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + VVV W Y ++ +
Sbjct: 240 YDAGLKTMHHVVVKSWIGDYGYMYNDIQ 267
>gi|213583031|ref|ZP_03364857.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Typhi str.
E98-0664]
Length = 321
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 102/267 (38%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q ++ L S S + +
Sbjct: 61 GLMPQAILSAEHGSLNPNQMPEKAVNLQGVNRIA----PLTTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S VI+G+ LA LG++ GD+I ++ P
Sbjct: 117 IDPAQKDPLTPYLVNVKQSELQPGKYNVILGEQLAGQLGVNRGDQIRLMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ + + D + +++Q+A ++G +++ +P ++
Sbjct: 177 RLPSQRLFTVIGTFAANSEVDGYEMLVNIQDASRLMRYPAGNITGWRLWLDEPLQVDTLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW++R F
Sbjct: 237 ---QQTLPQGTKWQDWRERKGELFQAV 260
>gi|323144191|ref|ZP_08078826.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Succinatimonas hippei YIT 12066]
gi|322416032|gb|EFY06731.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Succinatimonas hippei YIT 12066]
Length = 395
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 49/266 (18%), Positives = 89/266 (33%), Gaps = 13/266 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + +A RYL + + + F S + IS IG+ +GV ALIVV SVM G ++ + +L
Sbjct: 1 MFKPLTLSIAVRYLLARKTHKFASFVALISTIGIALGVSALIVVTSVMQGLQDRLKDNLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G H+++ + I V Q+ + G +
Sbjct: 61 GSTPHLIVSSDAALDAAALKALPHVIAIA--PFVSGQALLQSDNGIVLVNVEGEDTLDLD 118
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G+ D G + + +L + + G+
Sbjct: 119 SDIKKADVPHDKLTEGSFELYADMGLLIKLNLNLHDKVRLISTQNARYTPL-------GL 171
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + + G D V + + + + N S +++ DP I +T E
Sbjct: 172 TPSQRIFYIKGATPSLTGDNSIPTVKGNYSDIKKLLRINNKSSSYRLYLSDPFLINETVE 231
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCY 268
L + WQ FF
Sbjct: 232 K----LPQNLKYTTWQDSKGDFFKAV 253
>gi|330961358|gb|EGH61618.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. maculicola str. ES4326]
Length = 316
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 75/268 (27%), Positives = 121/268 (45%), Gaps = 3/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RY + R+N F+S S S IG+ +GV+ +IVV+SVMNGF +M RVL
Sbjct: 1 MFRPLFVFIGTRYTRAKRRNHFVSFISLTSMIGLALGVVVMIVVLSVMNGFDHEMRTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I + P+ D++ + ++ P V+ V PF Q ++ +L
Sbjct: 61 GMVPHATI-ESADPITDWRGLGAKVQENPQVLAVAPFTQMQGLLTHDGKVQKVLLNGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G + + G++IG A LG+ IGDK+ ++P VTP GM
Sbjct: 120 VEERKVSIIDHFIKQGQLDSLTPGSFGIMIGDKAAAKLGVGIGDKLTFVAPEVTVTPAGM 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLENAVSGIEVFVKDPDAIEKTH 241
R K + V G+F + + D + +L + N V G+ + D A +T
Sbjct: 180 FPRMKRFEVTGIFHVGAGEIDGFLGLTNLDDLGRLHRWKPNQVQGLRLKFDDLFAAPRTS 239
Query: 242 ENIVRILG-NGVVVIDWQQRYQIFFSCY 268
I + LG N DW + + +
Sbjct: 240 WEIAQKLGENNFYSRDWTRTHGNLYQAI 267
>gi|329850611|ref|ZP_08265456.1| lipoprotein releasing system, transmembrane protein, LolC/E family
protein [Asticcacaulis biprosthecum C19]
gi|328840926|gb|EGF90497.1| lipoprotein releasing system, transmembrane protein, LolC/E family
protein [Asticcacaulis biprosthecum C19]
Length = 427
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 75/271 (27%), Positives = 120/271 (44%), Gaps = 5/271 (1%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F +E ++ +YL + RK+ I++ + ISF+G+M+ V ALI V+S+MNGFRE+++ RVL
Sbjct: 9 FRAWEFDLSLKYLRTKRKDGGIAVIAIISFVGIMLAVTALISVLSIMNGFREELMSRVLA 68
Query: 64 INGH-VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
GH V + + RL P V V PF+ + + G ++RG+
Sbjct: 69 FGGHGYVYGRTIDDFAHRDDMVARLKAAPGVTSVTPFIDSPGLIQAGNGRTGGGIMRGVV 128
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGIS----IGDKINILSPYGDVT 178
D S D L + I L G T
Sbjct: 129 PEDLKNTPIIAGTIAKGGSMDQFGVGDYGGDVVLIGDGLARTVNVIPGDEITLISPGRST 188
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
G K+Y V G+F D VYM +Q+AQL+F+ E+ +E+ V+ P ++
Sbjct: 189 SFGSTPLRKTYIVGGLFHSGVSQIDQSFVYMPIQQAQLFFDREDEWDALEIKVEKPYEVQ 248
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
K + IV+ +G G + DW + +S +
Sbjct: 249 KYRDAIVKAVGEGGLFEDWTIQNAATWSALK 279
>gi|327484430|gb|AEA78837.1| Lipoprotein releasing system transmembrane protein LolC [Vibrio
cholerae LMA3894-4]
Length = 402
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 56/267 (20%), Positives = 104/267 (38%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RYL + F S++S G+ IGVM+L+ V+SVMNGF + R+L
Sbjct: 1 MFHPISAFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ V+ + + + + P V +A V S +G+L+
Sbjct: 61 GVLPQAVVSEAAGKTTLSATPPDFVTALSTQRPPEPLVRSEAVVQSASQLAAGLLIGIEP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G V+ + +G LAR+L +++GDK+ ++
Sbjct: 121 QQND---PIEQHLIAGRVTALQAGEYQLFLGHLLARSLNVTVGDKVRLMVTEASQFTPLG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTH 241
+ S+ + D D ++ L++A + +SG +F DP + +
Sbjct: 178 RLPSQRNFTVAGIFNTGSDVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFDDPFVVSQLA 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
E + L DW+++ F
Sbjct: 238 E---QPLPQDWQWSDWREQRGELFQAV 261
>gi|212704561|ref|ZP_03312689.1| hypothetical protein DESPIG_02621 [Desulfovibrio piger ATCC 29098]
gi|212671960|gb|EEB32443.1| hypothetical protein DESPIG_02621 [Desulfovibrio piger ATCC 29098]
Length = 410
Score = 122 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 73/272 (26%), Positives = 129/272 (47%), Gaps = 5/272 (1%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + FE+ VA RYLFS RK FI I S +S +GV +GV AL+VV+ V NG DM +
Sbjct: 1 MRM--PFELFVALRYLFSRRKQTFIYIISIMSILGVALGVGALVVVLGVYNGLTTDMRDK 58
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
++G N H ++ + + ++ + + G G+++RG
Sbjct: 59 IIGANAHGIVMSYVPAAFQQHPDLVQRVEAVEHVRGATPFIYTEVMLSAAGGVKGLVLRG 118
Query: 121 ISNSDFSYLQNSFSRFYGNVSND--FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
I + + D + G++IG++LA+ LGI +G ++N+LSP G+
Sbjct: 119 IDPESAPKVLSMLREIRRGSVADLKREGTPGIVIGEELAKRLGIGLGSRVNLLSPSGEKG 178
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAV-SGIEVFVKDPDAI 237
G R + + V+G+F+ +YD + ++ L+ A+ L + +GIE+ V D
Sbjct: 179 ATGYSPRIRPFEVVGIFKTGMFEYDATLAFVDLKAARDILGLPDGFLTGIEIMVDDVYKA 238
Query: 238 EKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ +++ LG+ V W + F+ +
Sbjct: 239 DAIAQSVQDTLGSPFYVRHWMEMNANLFAALK 270
>gi|327393508|dbj|BAK10930.1| lipoprotein-releasing system transmembrane protein LolC [Pantoea
ananatis AJ13355]
Length = 399
Score = 122 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 100/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GV+A+I V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVLAMITVLSVMNGFERELEGNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ + QF A+ L L S S + +
Sbjct: 61 GLMPQALVTSDKGSINPQQFPASALKLNGVNRIA----PLTTANVVLQSPHSVSVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + VI+G+ LA LG+ GD + ++ P
Sbjct: 117 IQPDEKDPLTPYLVNTQQTVLQPGQYNVILGEQLASQLGVKRGDTLRLMVPSVSQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ + + D + ++ Q+A ++G +++ P ++
Sbjct: 177 RVPSQRLFTVAGTYAANSEVDGYQILVNQQDASRIMRYPAGNITGWRLWLDKPLQVDTVT 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G+V DW++R F
Sbjct: 237 ---QQRLPAGMVWKDWRERKGDLFQAV 260
>gi|254226049|ref|ZP_04919648.1| conserved hypothetical protein [Vibrio cholerae V51]
gi|125621432|gb|EAZ49767.1| conserved hypothetical protein [Vibrio cholerae V51]
Length = 406
Score = 122 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 55/267 (20%), Positives = 104/267 (38%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RYL + F S++S G+ IGVM+L+ V+SVMNGF + R+L
Sbjct: 5 MFHPISAFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRIL 64
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ V+ + + + + P V +A V S +G+L+
Sbjct: 65 GVLPQAVVTEAAGKTTLSTTPPDFVTALSTQRPPEPLVRSEAVVQSASQLAAGLLIGIEP 124
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G ++ + +G LAR+L +++GDK+ ++
Sbjct: 125 QQND---PIEQHLIAGRLTALQAGEYQLFLGHLLARSLNVTVGDKVRLMVTEASQFTPLG 181
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTH 241
+ S+ + D D ++ L++A + +SG +F DP + +
Sbjct: 182 RLPSQRNFTVAGIFNTGSDVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFDDPFVVSQLA 241
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
E + L DW+++ F
Sbjct: 242 E---QPLPQDWQWSDWREQRGELFQAV 265
>gi|238758412|ref|ZP_04619589.1| Lipoprotein-releasing system transmembrane protein lolE [Yersinia
aldovae ATCC 35236]
gi|238703316|gb|EEP95856.1| Lipoprotein-releasing system transmembrane protein lolE [Yersinia
aldovae ATCC 35236]
Length = 419
Score = 122 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 54/270 (20%), Positives = 112/270 (41%), Gaps = 2/270 (0%)
Query: 1 MSI-FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
M + S +++ R+ R+ +S+ S IS +G+ +GV LIV +S MNGF ++
Sbjct: 3 MGMGVSPLSLLIGLRFSRGRRRGGMVSLISVISTLGIALGVAVLIVGLSAMNGFERELKN 62
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + H I P + R++ +P ++ P+++ + + + +
Sbjct: 63 RILAVVPHGEIAVVNQPFSGWPQTLQRIEKVPGIVAAAPYINFTGLIENNAQLRAVQIKG 122
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
++ + + +I+GK LA LG+ G + ++ P D
Sbjct: 123 VDPQAEQHLSALPSFVPGNAWESFKAGQQQIILGKGLADALGVKQGSWLTVMIPNSDPEM 182
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+ + V G+F+ D+ + + L +AQ Y ++ ++V+GI + V D K
Sbjct: 183 KLLQPKRIRLQVAGVFQ-LSGQLDHSLALVPLADAQHYLDMGDSVTGIAIKVDDVYNANK 241
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + V + W Y + +
Sbjct: 242 LVRSAGEVTNAYVYISSWIGTYGYMYRDIQ 271
>gi|229523903|ref|ZP_04413308.1| lipoprotein releasing system transmembrane protein LolC [Vibrio
cholerae bv. albensis VL426]
gi|229337484|gb|EEO02501.1| lipoprotein releasing system transmembrane protein LolC [Vibrio
cholerae bv. albensis VL426]
Length = 406
Score = 122 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 56/267 (20%), Positives = 104/267 (38%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RYL + F S++S G+ IGVM+L+ V+SVMNGF + R+L
Sbjct: 5 MFHPISAFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRIL 64
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ V+ + + + + P V +A V S +G+L+
Sbjct: 65 GVLPQAVVTEAAGKTTLSAAPPDFVTALSTQRPPEPLVRSEAVVQSASQLAAGLLIGIEP 124
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G V+ + +G LAR+L +++GDK+ ++
Sbjct: 125 QQND---PIEQHLIAGRVTALQAGEYQLFLGHLLARSLNVTVGDKVRLMVTEASQFTPLG 181
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTH 241
+ S+ + D D ++ L++A + +SG +F DP + +
Sbjct: 182 RLPSQRNFTVAGIFNTGSDVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFDDPFVVSQLA 241
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
E + L DW+++ F
Sbjct: 242 E---QPLPQDWQWSDWREQRGELFQAV 265
>gi|291617058|ref|YP_003519800.1| LolC [Pantoea ananatis LMG 20103]
gi|291152088|gb|ADD76672.1| LolC [Pantoea ananatis LMG 20103]
Length = 402
Score = 122 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 51/268 (19%), Positives = 101/268 (37%), Gaps = 8/268 (2%)
Query: 2 SIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
S++ + + RY+ + F S++S IG+ +GV+A+I V+SVMNGF ++ +
Sbjct: 3 SMYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVLAMITVLSVMNGFERELEGNI 62
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
LG+ ++ + QF A+ L L S S + +
Sbjct: 63 LGLMPQALVTSDKGSINPQQFPASALKLNGVNRIA----PLTTANVVLQSPHSVSVGVML 118
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ + VI+G+ LA LG+ GD + ++ P
Sbjct: 119 GIQPDEKDPLTPYLVNTQQTVLQPGQYNVILGEQLASQLGVKRGDTLRLMVPSVSQFTPM 178
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKT 240
+ S+ + + D + ++ Q+A ++G +++ P ++
Sbjct: 179 GRVPSQRLFTVAGTYAANSEVDGYQILVNQQDASRIMRYPAGNITGWRLWLDKPLQVDTV 238
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G+V DW++R F
Sbjct: 239 T---QQRLPAGMVWKDWRERKGDLFQAV 263
>gi|327399437|ref|YP_004340306.1| hypothetical protein Hipma_1289 [Hippea maritima DSM 10411]
gi|327182066|gb|AEA34247.1| protein of unknown function DUF214 [Hippea maritima DSM 10411]
Length = 396
Score = 122 bits (304), Expect = 7e-26, Method: Composition-based stats.
Identities = 71/266 (26%), Positives = 131/266 (49%), Gaps = 10/266 (3%)
Query: 5 SRFEVIVAWRYLFSNR-KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FE +A+RY+ S++ K FIS ++ +S +G+++GV ALI+VM VMNGF ++ ++++
Sbjct: 1 MNFESFLAFRYIKSSKNKEKFISFSALMSILGIIVGVAALIIVMGVMNGFDNELQRKIVD 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+N HV+++ Q I NR++ V V P + Q +S + +
Sbjct: 61 VNPHVLVKNVSGLFDYNQTIINRINSQKGVKTVSPLLVTQGMISSNN---------ISTG 111
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + S + GV++G +L++ LG+ +G + I+ P+G TP G
Sbjct: 112 VVINGIDISKEQNIKRYITKGKLKGGVVLGFELSKILGVGVGGNVRIILPFGKTTPFGFA 171
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
S V+G+F+ DYD+ VY+ L+E +L+ ++ I V + DP K E+
Sbjct: 172 PLSFKEKVVGIFKSGMYDYDSSFVYIPLKELWAKTSLKGKINTIAVELNDPFKANKFTEH 231
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ ++ W + FF+ +
Sbjct: 232 LAGVMPFSFYASSWIKLNSNFFTALK 257
>gi|206580257|ref|YP_002239263.1| lipoprotein-releasing system transmembrane protein LolC [Klebsiella
pneumoniae 342]
gi|206569315|gb|ACI11091.1| lipoprotein-releasing system transmembrane protein LolC [Klebsiella
pneumoniae 342]
Length = 399
Score = 122 bits (304), Expect = 7e-26, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 98/267 (36%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPAALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ K + Q V L S S + +
Sbjct: 61 GLMPQAILSAKQGSVNPQQLPEREAKL----QGVTRVAPITTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S+ VI+G+ LA LG++ GD+I ++ P
Sbjct: 117 IDPAQNDPLTPYLVNVKQSDLQAGKYNVILGEQLAGQLGVNRGDQIRVMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ + + D + ++ +A ++G +++ P ++
Sbjct: 177 RVPSQRLFTVIGTFAANSEVDGYQMLTNIDDASRLMRYPLGNITGWRLWLDKPLQVDTLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW++R F
Sbjct: 237 ---QQTLPPGTQWQDWRERKGELFQAV 260
>gi|254286760|ref|ZP_04961714.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|150423187|gb|EDN15134.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
Length = 406
Score = 122 bits (304), Expect = 7e-26, Method: Composition-based stats.
Identities = 56/267 (20%), Positives = 104/267 (38%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RYL + F S++S G+ IGVM+L+ V+SVMNGF + R+L
Sbjct: 5 MFHPISAFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRIL 64
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ V+ + + + + P V +A V S +G+L+
Sbjct: 65 GVLPQAVVTEAAGKTTLSATPPDFVTALSTQRPPEPLVRSEAVVQSASQLAAGLLIGIEP 124
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G V+ + +G LAR+L +++GDK+ ++
Sbjct: 125 QQND---PIEQHLIAGRVTALQAGEYQLFLGHLLARSLNVTVGDKVRLMVTEASQFTPLG 181
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTH 241
+ S+ + D D ++ L++A + +SG +F DP + +
Sbjct: 182 RLPSQRNFTVAGIFNTGSDVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFDDPFVVSQLA 241
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
E + L DW+++ F
Sbjct: 242 E---QPLPQDWQWSDWREQRGELFQAV 265
>gi|288936121|ref|YP_003440180.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Klebsiella variicola At-22]
gi|288890830|gb|ADC59148.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Klebsiella variicola At-22]
Length = 402
Score = 122 bits (304), Expect = 7e-26, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 98/267 (36%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 4 MYQPAALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 63
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ K + Q V L S S + +
Sbjct: 64 GLMPQAILSAKQGSVNPQQLPEREAKL----QGVTRVAPITTGDVVLQSARSVAVGVMLG 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S+ VI+G+ LA LG++ GD+I ++ P
Sbjct: 120 IDPAQNDPLTPYLVNVKQSDLQAGKYNVILGEQLAGQLGVNRGDQIRVMVPSASQFTPMG 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ + + D + ++ +A ++G +++ P ++
Sbjct: 180 RVPSQRLFTVIGTFAANSEVDGYQMLTNIDDASRLMRYPLGNITGWRLWLDKPLQVDTLS 239
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW++R F
Sbjct: 240 ---QQTLPPGTQWQDWRERKGELFQAV 263
>gi|149912294|ref|ZP_01900864.1| putative ABC transporter integral membrane subunit [Moritella sp.
PE36]
gi|149804628|gb|EDM64689.1| putative ABC transporter integral membrane subunit [Moritella sp.
PE36]
Length = 408
Score = 122 bits (304), Expect = 7e-26, Method: Composition-based stats.
Identities = 69/268 (25%), Positives = 116/268 (43%), Gaps = 5/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY S R N F+S + S G+ IGV+ALI V+SVMNGF +D+ R+L
Sbjct: 1 MYYPLSLFIGLRYTRSKRNNRFVSFITLFSTAGITIGVLALITVLSVMNGFEQDLKTRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G HV++ K + + L P V V PF+ A V S L
Sbjct: 61 GAVPHVIVTPKSGSDNIDES-LSALADDPLVAAVTPFLQADAMVQSKSQIQGAQLQGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+S + + G++S +IIG+ +A++L + +GDKI ++S G +
Sbjct: 120 SSYPQWDVIRQNMLIGDISLLQPGKYNIIIGRSMAKSLNVKLGDKIRLISTKGSIFTPMG 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
+ S+ + D + V +++ +A L ++ VFV DP A+ +
Sbjct: 180 RVPSQRKFTVVGIYSVGSDVEATQVLVNITDAGKLVRLSPSSPMQHRVFVHDPFAVNELA 239
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
R + +DWQ F +
Sbjct: 240 ---SRNFFSNFDSLDWQTTRGELFQAVK 264
>gi|71279173|ref|YP_270153.1| lipoprotein releasing system transmembrane protein LolC [Colwellia
psychrerythraea 34H]
gi|71144913|gb|AAZ25386.1| lipoprotein releasing system transmembrane protein LolC [Colwellia
psychrerythraea 34H]
Length = 422
Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats.
Identities = 65/282 (23%), Positives = 120/282 (42%), Gaps = 16/282 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY S F+S +F S +G+++GV ALI V+SVMNGF ++ KR+L
Sbjct: 1 MFQPISIFIGLRYSRSKSHTGFVSFITFFSTVGILLGVAALITVVSVMNGFEGELKKRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANR------LDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
GI HV++ + L P+V++V PF+ +A + + G GV
Sbjct: 61 GIVPHVIVSDFSTIDTGTDQEKSWQNLREELLTQPNVLRVTPFLESEALIQ-STKGLQGV 119
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
LV+GI S G++ N + +++G+ LA L +S+GD++ ++ P
Sbjct: 120 LVQGIMPKFEQKNIVSTHMVAGSMENLSTQSYSLVLGQSLANKLQVSLGDEVRLVLPNKS 179
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPD 235
V I + + D+ MVY+ + + + + +++ D
Sbjct: 180 VFTPMGRIPVQRVFTVAGIFHIGSQVDDAMVYVDSRYGAKLLRRTGDGIDKLRLYLDDAF 239
Query: 236 AIEKTHENIVRILGN--------GVVVIDWQQRYQIFFSCYE 269
+ +N+ + N + W + FS +
Sbjct: 240 NAKTVVKNLEQKQQNTEHSKTLDSINFSTWDESQGALFSAVK 281
>gi|116620160|ref|YP_822316.1| hypothetical protein Acid_1033 [Candidatus Solibacter usitatus
Ellin6076]
gi|116223322|gb|ABJ82031.1| protein of unknown function DUF214 [Candidatus Solibacter usitatus
Ellin6076]
Length = 408
Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats.
Identities = 61/269 (22%), Positives = 116/269 (43%), Gaps = 6/269 (2%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FE+ +A RYL + RK A IS+ + IS +GV GVMAL++ ++V +GF + + +LG
Sbjct: 1 MKTFELFIAGRYLRARRKEAVISVITAISVLGVAAGVMALVIALAVTSGFSKTLQHNLLG 60
Query: 64 INGHV--VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
H+ + +Q + ++Q + + +P V V P + G ++G+
Sbjct: 61 AMAHISVIPRQPGDGIENWQELVVGIRKVPHVTAVSPALY-SPTFLTGPIQSKGAYIKGV 119
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKI--NILSPYGDVTP 179
L + + + G L L +G ++ N+ ++ P
Sbjct: 120 DLDSELALSGTLRKLKSGSLDRLRDPNASPPGIILGSRLAEDVGMRVGDNVELLADEMLP 179
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+G+ + + V G+F F + D+ YMS+ AQ F+ + ++ IE+ V D + +
Sbjct: 180 VGVRPVKRRFKVAGLFETGFYEIDDLWAYMSIGAAQKAFST-DQINQIEINVDDLNLAGR 238
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCY 268
I ++ G W +R +
Sbjct: 239 VAPEIEKVAGPRYTTTTWMERNKQILGAL 267
>gi|261417019|ref|YP_003250702.1| protein of unknown function DUF214 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373475|gb|ACX76220.1| protein of unknown function DUF214 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302326582|gb|ADL25783.1| lipoprotein releasing system transmembrane protein, LolC/E family
[Fibrobacter succinogenes subsp. succinogenes S85]
Length = 416
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 60/275 (21%), Positives = 112/275 (40%), Gaps = 9/275 (3%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ S+ E+++AWRYL + RK+ F+S+ S +GV IGV AL+V ++ +NGF E++ +++
Sbjct: 1 MISKLELLIAWRYLGAQRKSLFVSLIGIFSMLGVSIGVFALVVALAAVNGFEEEVTAQMI 60
Query: 63 GINGHVVIQQKYYPL--------VDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
G + H + + Q + I +S + G+ G
Sbjct: 61 GKDAHFELMAYNGNPIGPYDSLTQEVQKRVPDVVASSPFIVYKVGISSKKVNDGIVIYGI 120
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL-SP 173
Y++ R G+I+G LA L + +GDK+ +
Sbjct: 121 DPATAKGVTDIHKYIKWGEYSVDSLEDMGGKRRPGIILGTGLAARLRVVVGDKLVLQTFQ 180
Query: 174 YGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKD 233
D G + V G+F +YD + Y+ + + Q + N V+GI+ +KD
Sbjct: 181 SPDEAMSSGGPKMMMCVVSGIFETGTYEYDGNLAYVGISDLQKLLGMGNTVTGIQFRIKD 240
Query: 234 PDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ +++ L +DW+ +
Sbjct: 241 HWKAGEAVDSMATWLSYPYYGMDWKSKNITLLKWM 275
>gi|153213051|ref|ZP_01948589.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|124116098|gb|EAY34918.1| conserved hypothetical protein [Vibrio cholerae 1587]
Length = 406
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 56/267 (20%), Positives = 104/267 (38%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RYL + F S++S G+ IGVM+L+ V+SVMNGF + R+L
Sbjct: 5 MFHPISAFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRIL 64
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ V+ + + + + P V +A V S +G+L+
Sbjct: 65 GVLPQAVVSEAAGKTTLSATPPDFVTALSTQRPPEPLVRSEAVVQSTSQLAAGLLIGIEP 124
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G V+ + +G LAR+L +++GDK+ ++
Sbjct: 125 QQND---PIEQHLIAGRVTALQAGEYQLFLGHLLARSLNVTVGDKVRLMVTEASQFTPLG 181
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTH 241
+ S+ + D D ++ L++A + +SG +F DP + +
Sbjct: 182 RLPSQRNFTVAGIFNTGSDVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFDDPFVVSQLA 241
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
E + L DW+++ F
Sbjct: 242 E---QPLPQDWQWSDWREQRGELFQAV 265
>gi|30062649|ref|NP_836820.1| outer membrane-specific lipoprotein transporter subunit LolC
[Shigella flexneri 2a str. 2457T]
gi|56479828|ref|NP_707031.2| outer membrane-specific lipoprotein transporter subunit LolC
[Shigella flexneri 2a str. 301]
gi|30040897|gb|AAP16627.1| hypothetical protein S1200 [Shigella flexneri 2a str. 2457T]
gi|56383379|gb|AAN42738.2| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|313650428|gb|EFS14835.1| lipo-releasing system transmembrane protein lolC [Shigella flexneri
2a str. 2457T]
Length = 399
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 101/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAVDRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q + L S S + +
Sbjct: 61 GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVA----PITTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ VI+G+ LA LG++ GD+I ++ P
Sbjct: 117 IDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + +++++A ++G +++ +P ++
Sbjct: 177 RIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAANITGWRLWLDEPLRVDSLS 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW+ R F
Sbjct: 237 ---QQKLPEGSKWQDWRDRKGELFQAV 260
>gi|229529094|ref|ZP_04418484.1| lipoprotein releasing system transmembrane protein LolC [Vibrio
cholerae 12129(1)]
gi|229332868|gb|EEN98354.1| lipoprotein releasing system transmembrane protein LolC [Vibrio
cholerae 12129(1)]
Length = 406
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 56/267 (20%), Positives = 104/267 (38%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RYL + F S++S G+ IGVM+L+ V+SVMNGF + R+L
Sbjct: 5 MFHPISAFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRIL 64
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ V+ + + + + P V +A V S +G+L+
Sbjct: 65 GVLPQAVVSEAAGKTTLSATPPDFVTALSTQRPPEPLVRSEAVVQSASQLAAGLLIGIEP 124
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G V+ + +G LAR+L +++GDK+ ++
Sbjct: 125 QQND---PIEQHLIAGRVTALQAGEYQLFLGHLLARSLNVTVGDKVRLMVTEASQFTPLG 181
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTH 241
+ S+ + D D ++ L++A + +SG +F DP + +
Sbjct: 182 RLPSQRNFTVAGIFNTGSDVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFDDPFVVSQLA 241
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
E + L DW+++ F
Sbjct: 242 E---QPLPQDWQWSDWREQRGELFQAV 265
>gi|85059054|ref|YP_454756.1| outer membrane-specific lipoprotein transporter subunit LolC
[Sodalis glossinidius str. 'morsitans']
gi|84779574|dbj|BAE74351.1| lipoprotein releasing system transmembrane protein lolC [Sodalis
glossinidius str. 'morsitans']
Length = 400
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 57/267 (21%), Positives = 107/267 (40%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVVLYIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELESNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ L + A+ D + V V P L S S +
Sbjct: 61 GLMPQALLTSPEGRLDPKRIPASVPDALAGVTHVAP---LTTGDVVLQSARSVAVGVMFG 117
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S VI+G +LA LG+ GD + ++ P
Sbjct: 118 VNPTDPEPLSHYLVDTRQDYLVAGQYRVILGDELAAALGVKRGDAVRLMVPGASQFTPMG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + + D + ++ Q+A ++G ++++ P A+++
Sbjct: 178 RIPSQRLFTVVGTFVANSEVDGYQLLVNQQDASRLMRYPAGYITGWRLWLQQPLAVDELS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
R L +G+V DW++R F
Sbjct: 238 ---ARPLPDGLVWHDWRERKGELFQAV 261
>gi|290510826|ref|ZP_06550196.1| lipoprotein-releasing system permease [Klebsiella sp. 1_1_55]
gi|289777542|gb|EFD85540.1| lipoprotein-releasing system permease [Klebsiella sp. 1_1_55]
Length = 402
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 98/267 (36%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 4 MYQPAALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 63
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ K + Q V L S S + +
Sbjct: 64 GLMPQAILSAKQGSVNPQQLPEREAKL----QGVTRVAPITTGDVVLQSARSVAVGVMLG 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S+ VI+G+ LA LG++ GD+I ++ P
Sbjct: 120 IDPAQNDPLTPYLVNVKQSDLQAGKYNVILGEQLAGQLGVNRGDQIRVMVPSASQFTPMG 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ + + D + ++ +A ++G +++ P ++
Sbjct: 180 RVPSQRLFTVIGTFAANSEVDGYQMLTNIDDASRLMRYPLGNITGWRLWLDKPLQVDTLS 239
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW++R F
Sbjct: 240 ---QQTLPPGTQWQDWRERKGELFQAV 263
>gi|296102864|ref|YP_003613010.1| lipoprotein-releasing system permease protein [Enterobacter cloacae
subsp. cloacae ATCC 13047]
gi|295057323|gb|ADF62061.1| lipoprotein-releasing system permease protein [Enterobacter cloacae
subsp. cloacae ATCC 13047]
Length = 414
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 54/267 (20%), Positives = 114/267 (42%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ S +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L
Sbjct: 1 MASPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ P +++ ++++ +P + P+++ V + + +
Sbjct: 61 AVVPHGEIEPVNQPWNNWRDALSKVENVPGIAAAAPYINFTGLVESGVNLRAIQVKGVNP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G +N + +I+GK +A L + GD ++I+ P
Sbjct: 121 AQEARLSALPKYVQNGAWANFKAGEQQIIMGKGVADALKVKQGDWVSIMIPNASADHKLQ 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ V G+ + D+ + L++A+ Y ++ ++V+GI + V D K
Sbjct: 181 QPKRVRLHVTGILQ-LSGQLDHSFAMVPLEDARQYLDMGDSVTGIAIKVNDVFNANKLVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + N V + W Y + +
Sbjct: 240 DAGSVTNNYVYIKSWIGTYGYMYRDIQ 266
>gi|330870698|gb|EGH05407.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 272
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 75/268 (27%), Positives = 121/268 (45%), Gaps = 3/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RY + R+N F+S S S IG+ +GV+ +IVV+SVMNGF +M RVL
Sbjct: 4 MFRPLFVFIGTRYTRAKRRNHFVSFISLTSMIGLALGVVVMIVVLSVMNGFDHEMRTRVL 63
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I + P+ D+ +A ++ P V+ V PF Q ++ +L
Sbjct: 64 GMVPHATI-ESADPITDWCGLAAKVQENPQVLAVAPFTQMQGLLTHDGKVQKVLLNGIDP 122
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G + + G++IG A LG+ +GDK+ ++P VTP GM
Sbjct: 123 AEERKVSIIDHFIKQGQLDSLSPGSFGIMIGDKAAAKLGVVVGDKLTFVAPEVTVTPAGM 182
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLENAVSGIEVFVKDPDAIEKTH 241
R K + V G+F + + D + +L + N V G+ + D A +T
Sbjct: 183 FPRMKRFEVTGIFHVGAGEIDGFLGLTNLDDLARLHRWKPNQVQGLRLKFDDLFAAPRTS 242
Query: 242 ENIVRILG-NGVVVIDWQQRYQIFFSCY 268
I + LG N DW + + +
Sbjct: 243 WEIAQKLGENNFYSRDWTRTHGNLYQAI 270
>gi|153830800|ref|ZP_01983467.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|229515264|ref|ZP_04404724.1| lipoprotein releasing system transmembrane protein LolC [Vibrio
cholerae TMA 21]
gi|229520344|ref|ZP_04409770.1| lipoprotein releasing system transmembrane protein LolC [Vibrio
cholerae TM 11079-80]
gi|148873707|gb|EDL71842.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|229342710|gb|EEO07702.1| lipoprotein releasing system transmembrane protein LolC [Vibrio
cholerae TM 11079-80]
gi|229347969|gb|EEO12928.1| lipoprotein releasing system transmembrane protein LolC [Vibrio
cholerae TMA 21]
Length = 406
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 55/267 (20%), Positives = 104/267 (38%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RYL + F S++S G+ IGVM+L+ V+SVMNGF + R+L
Sbjct: 5 MFHPISAFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRIL 64
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ V+ + + + + P V +A V S +G+L+
Sbjct: 65 GVLPQAVVSEAAGKTTLSATPPDFVTALSTQRPPEPLVRSEAVVQSASQLAAGLLIGIEP 124
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G ++ + +G LAR+L +++GDK+ ++
Sbjct: 125 QQND---PIEQHLIAGRLTALQAGEYQLFLGHLLARSLNVTVGDKVRLMVTEASQFTPLG 181
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTH 241
+ S+ + D D ++ L++A + +SG +F DP + +
Sbjct: 182 RLPSQRNFTVAGIFNTGSDVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFDDPFVVSQLA 241
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
E + L DW+++ F
Sbjct: 242 E---QPLPQDWQWSDWREQRGELFQAV 265
>gi|297579401|ref|ZP_06941329.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297536995|gb|EFH75828.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 406
Score = 121 bits (303), Expect = 9e-26, Method: Composition-based stats.
Identities = 56/267 (20%), Positives = 103/267 (38%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RYL + F S++S G+ IGVM+L+ V+SVMNGF + R+L
Sbjct: 5 MFHPISAFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRIL 64
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ V+ + + + + P V +A V S +G+L+
Sbjct: 65 GVLPQAVVSEAAGKTTLSATPPDFVTALSTQRPPEPLVRSEAVVQSASQLAAGLLIGIEP 124
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G V + +G LAR+L +++GDK+ ++
Sbjct: 125 QQND---PIEQHLIAGRVMALQAGEYQLFLGHLLARSLNVTVGDKVRLMVTEASQFTPLG 181
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTH 241
+ S+ + D D ++ L++A + +SG +F DP + +
Sbjct: 182 RLPSQRNFTVAGIFNTGSDVDGELMVTHLRDAAKLLRYDAQTISGWRLFFDDPFVVSQLA 241
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
E + L DW+++ F
Sbjct: 242 E---QPLPQDWQWSDWREQRGELFQAV 265
>gi|306841941|ref|ZP_07474619.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Brucella sp. BO2]
gi|306287974|gb|EFM59382.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Brucella sp. BO2]
Length = 381
Score = 121 bits (303), Expect = 9e-26, Method: Composition-based stats.
Identities = 96/233 (41%), Positives = 140/233 (60%)
Query: 37 MIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKV 96
M+GV LI+VM+VMNGFR +++ R+LGINGH+++Q PL DY + R+D IP +
Sbjct: 1 MLGVATLIIVMAVMNGFRAELLTRILGINGHLIMQPIDRPLDDYADLIKRVDAIPGIKFA 60
Query: 97 LPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDL 156
+P V GQA V G G+G LVRG+ D L+ + FD GV IG +
Sbjct: 61 IPVVEGQALVQGNIGAGTGALVRGLREEDLDKLKLISTNIRQGTLKGFDHSGGVAIGTRM 120
Query: 157 ARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQL 216
A NLG+S+GD + ++SP GDVTP G+ R K+Y ++ +F + +YD+ +V M L EAQL
Sbjct: 121 AENLGLSVGDTLRVISPDGDVTPFGVNPRVKAYPIVAIFEIGMSEYDSSIVMMPLSEAQL 180
Query: 217 YFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+FN E V +E+FV +PD ++ + + ++DW+QR Q FFS E
Sbjct: 181 FFNQEGKVQSLEIFVDNPDKVDAMRAPVEEAAARQLSLVDWRQRNQTFFSALE 233
>gi|183179493|ref|ZP_02957704.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|183012904|gb|EDT88204.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
Length = 406
Score = 121 bits (303), Expect = 9e-26, Method: Composition-based stats.
Identities = 55/267 (20%), Positives = 104/267 (38%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RYL + F S++S G+ IGVM+L+ V+SVMNGF + R+L
Sbjct: 5 MFHPISAFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRIL 64
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ V+ + + + + P V +A V S +G+L+
Sbjct: 65 GVLPQAVVTEAAGKTTLSATPPDFVTALSTQRPPEPLVRSEAVVQSASQLAAGLLIGIEP 124
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G ++ + +G LAR+L +++GDK+ ++
Sbjct: 125 QQND---PIEQHLIAGRLTALQAGEYRLFLGHLLARSLNVTVGDKVRLMVTEASQFTPLG 181
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTH 241
+ S+ + D D ++ L++A + +SG +F DP + +
Sbjct: 182 RLPSQRNFTVAGIFNTGSDVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFDDPFVVSQLA 241
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
E + L DW+++ F
Sbjct: 242 E---QPLPQDWQWSDWREQRGELFQAV 265
>gi|300723613|ref|YP_003712918.1| outer membrane lipoprotein ABC transporter membrane protein
[Xenorhabdus nematophila ATCC 19061]
gi|297630135|emb|CBJ90772.1| transport protein of outer membrane lipoproteins (ABC superfamily,
membrane) [Xenorhabdus nematophila ATCC 19061]
Length = 415
Score = 121 bits (303), Expect = 9e-26, Method: Composition-based stats.
Identities = 55/264 (20%), Positives = 109/264 (41%), Gaps = 1/264 (0%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
+ A R+ R++ +S+ S IS +G+M+GV LI+ +S MNGF ++ R+L +
Sbjct: 5 PLALFTALRFSKGRRRSGMVSLISVISTLGIMLGVAVLIIGLSAMNGFERELNNRILSVV 64
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
H I P D++ R+ + P++ + + + S+
Sbjct: 65 PHGQIYAVNQPFHDWEQSLERVRRTSGIAGASPYIEFTGLMERGEKLHAVQVRGVDLASE 124
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
G VI+G+ +A +L + GD + ++ P D + + +
Sbjct: 125 SDVSTLPQFVRDGAWKTFSAGKNQVILGQGVAHSLHVKQGDWLTVMIPNSDPSLKLLQPK 184
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
V G+F+ D+ + + L +AQ Y + +A++GI + D A E+ +
Sbjct: 185 RIRLQVAGIFQ-LSGILDHSLALVPLVDAQKYLDYGHAITGIAIKADDVFAAEQRVWDAG 243
Query: 246 RILGNGVVVIDWQQRYQIFFSCYE 269
G V + W + Y ++ +
Sbjct: 244 NATGQYVYISTWIKDYGYMYNDIQ 267
>gi|262404231|ref|ZP_06080786.1| lipoprotein releasing system transmembrane protein LolC [Vibrio sp.
RC586]
gi|262349263|gb|EEY98401.1| lipoprotein releasing system transmembrane protein LolC [Vibrio sp.
RC586]
Length = 402
Score = 121 bits (303), Expect = 9e-26, Method: Composition-based stats.
Identities = 58/267 (21%), Positives = 103/267 (38%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RYL + F S++S G+ IGVM+L+ V+SVMNGF + R+L
Sbjct: 1 MFHPISAFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ V+ Q + + P V +A V S +G+L+
Sbjct: 61 GVLPQAVVAQDTGKTALTAEPPAFISALSTQRDPEPLVRSEAVVQSASQLAAGLLIGIEP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G VS + + +G LAR+L +++GDK+ ++
Sbjct: 121 LQND---PIEQYLIAGRVSALQEGEYQLFLGHLLARSLNVTVGDKVRLMVTEASQFTPLG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTH 241
+ S+ + D D ++ L++A + +SG +F DP +
Sbjct: 178 RLPSQRNFTVAGIFNTGSDVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFDDPFVVSDLA 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW+++ F
Sbjct: 238 ---TQPLPEGWQWSDWREQRGELFQAV 261
>gi|16760092|ref|NP_455709.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Typhi str.
CT18]
gi|29142137|ref|NP_805479.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Typhi str.
Ty2]
gi|62179737|ref|YP_216154.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|224584276|ref|YP_002638074.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Paratyphi C
strain RKS4594]
gi|25321153|pir||AB0645 ABC transporter integral membrane chain STY1257 [imported] -
Salmonella enterica subsp. enterica serovar Typhi
(strain CT18)
gi|16419735|gb|AAL20146.1| integral membrane protein ABC transporter [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|16502386|emb|CAD08341.1| ABC transporter integral membrane subunit [Salmonella enterica
subsp. enterica serovar Typhi]
gi|29137766|gb|AAO69328.1| ABC transporter integral membrane subunit [Salmonella enterica
subsp. enterica serovar Typhi str. Ty2]
gi|62127370|gb|AAX65073.1| ABC transporter, integral membrane protein [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|224468803|gb|ACN46633.1| ABC transporter integral membrane subunit [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
gi|261246429|emb|CBG24238.1| ABC transporter integral membrane subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. D23580]
gi|267992994|gb|ACY87879.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Typhimurium
str. 14028S]
gi|322714207|gb|EFZ05778.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. A50]
Length = 436
Score = 121 bits (303), Expect = 9e-26, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 102/267 (38%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 38 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 97
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q ++ L S S + +
Sbjct: 98 GLMPQAILSAEHGSLNPNQMPEKAVNLQGVNRIA----PLTTGDVVLQSARSVAVGVMLG 153
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S VI+G+ LA LG++ GD+I ++ P
Sbjct: 154 IDPAQKDPLTPYLVNVKQSELQPGKYNVILGEQLAGQLGVNRGDQIRLMVPSASQFTPMG 213
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ + + D + +++Q+A ++G +++ +P ++
Sbjct: 214 RLPSQRLFTVIGTFAANSEVDGYEMLVNIQDASRLMRYPAGNITGWRLWLDEPLQVDTLS 273
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW++R F
Sbjct: 274 ---QQTLPQGTKWQDWRERKGELFQAV 297
>gi|222475557|ref|YP_002563974.1| Lipoprotein-releasing system transmembrane protein (lolE)
[Anaplasma marginale str. Florida]
gi|222419695|gb|ACM49718.1| Lipoprotein-releasing system transmembrane protein (lolE)
[Anaplasma marginale str. Florida]
Length = 408
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 77/263 (29%), Positives = 125/263 (47%), Gaps = 10/263 (3%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
E ++A RY+ SN S A+ +S +G+ IGV LI V SVMNGF ++ +LG+NG
Sbjct: 8 LEWLLARRYIQSNGGRFLFSTATVLSILGICIGVATLISVTSVMNGFSAKLLSSILGMNG 67
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
H+ I + + +PDV+ P + GQA + ++ V+
Sbjct: 68 HITIHCNRPDYPNV---IAEIHHVPDVVSAAPVIEGQALLKYENNIMGAVVRGMHMCDIH 124
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
L R + +G+++G LA ++G GD+I I+SP T G R+
Sbjct: 125 RKLHGYVVR-----GDVDMLEEGIVLGFRLAESIGADYGDEITIISPETSPTIFGAVPRT 179
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
K+Y V G+F + +YD+ Y+ L+++QL F N + IEVF++D + I R
Sbjct: 180 KTYKVTGIFDVGVYEYDSAFAYIPLRDSQLLFGYANKIKYIEVFLEDVTKSSEALVEIAR 239
Query: 247 ILGNGVVVIDWQQRYQIFFSCYE 269
+ V DW+ + +F E
Sbjct: 240 R--TSLKVEDWKVQQGQYFRALE 260
>gi|255745356|ref|ZP_05419305.1| lipoprotein releasing system transmembrane protein LolC [Vibrio
cholera CIRS 101]
gi|262153540|ref|ZP_06028669.1| lipoprotein releasing system transmembrane protein LolC [Vibrio
cholerae INDRE 91/1]
gi|262167440|ref|ZP_06035147.1| lipoprotein releasing system transmembrane protein LolC [Vibrio
cholerae RC27]
gi|255737186|gb|EET92582.1| lipoprotein releasing system transmembrane protein LolC [Vibrio
cholera CIRS 101]
gi|262024137|gb|EEY42831.1| lipoprotein releasing system transmembrane protein LolC [Vibrio
cholerae RC27]
gi|262030667|gb|EEY49302.1| lipoprotein releasing system transmembrane protein LolC [Vibrio
cholerae INDRE 91/1]
Length = 402
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 56/267 (20%), Positives = 103/267 (38%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RYL + F S++S G+ IGVM+L+ V+SVMNGF + R+L
Sbjct: 1 MFHPISAFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ V+ + + + + P V A V S +G+L+
Sbjct: 61 GVLPQAVVTEAAGKTTLSATPPDFVTALSTQRPPEPLVRSDAVVQSASQLAAGLLIGIEP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G V+ + +G LAR+L +++GDK+ ++
Sbjct: 121 QQND---PIEQHLIAGRVTALQAGEYQLFLGHLLARSLNVTVGDKVRLMVTEASQFTPLG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTH 241
+ S+ + D D ++ L++A + +SG +F DP + +
Sbjct: 178 RLPSQRNFTVAGIFNTGSDVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFDDPFVVSQLA 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
E + L DW+++ F
Sbjct: 238 E---QPLPQDWQWSDWREQRGELFQAV 261
>gi|56413797|ref|YP_150872.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Paratyphi A
str. ATCC 9150]
gi|197362720|ref|YP_002142357.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Paratyphi A
str. AKU_12601]
gi|56128054|gb|AAV77560.1| ABC transporter integral membrane subunit [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|197094197|emb|CAR59701.1| ABC transporter integral membrane subunit [Salmonella enterica
subsp. enterica serovar Paratyphi A str. AKU_12601]
gi|326623668|gb|EGE30013.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Dublin str.
3246]
gi|326628128|gb|EGE34471.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Gallinarum
str. 9]
Length = 436
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 102/267 (38%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 38 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 97
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q ++ L S S + +
Sbjct: 98 GLMPQAILSAEHGSLNPSQMPEKAVNLQGVNRIA----PLTTGDVVLQSARSVAVGVMLG 153
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S VI+G+ LA LG++ GD+I ++ P
Sbjct: 154 IDPAQKDPLTPYLVNVKQSELQPGKYNVILGEQLAGQLGVNRGDQIRLMVPSASQFTPMG 213
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ + + D + +++Q+A ++G +++ +P ++
Sbjct: 214 RLPSQRLFTVIGTFAANSEVDGYEMLVNIQDASRLMRYPAGNITGWRLWLDEPLQVDTLS 273
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW++R F
Sbjct: 274 ---QQTLPQGTKWQDWRERKGELFQAV 297
>gi|84386596|ref|ZP_00989622.1| putative ABC transporter integral membrane subunit [Vibrio
splendidus 12B01]
gi|84378402|gb|EAP95259.1| putative ABC transporter integral membrane subunit [Vibrio
splendidus 12B01]
Length = 402
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 64/267 (23%), Positives = 112/267 (41%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + V RYL + F S++S G+ IGV++L+ V+SVMNGF + R+L
Sbjct: 1 MFHPISLFVGLRYLKGRSGDRFSRFVSYMSTAGITIGVLSLVTVLSVMNGFEAQLKDRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ V+ ++ + + + V P V +A + + +G+L+
Sbjct: 61 GVLPQAVVYEQGGTTSLSAQAPDFAEQMSLNGHVEPIVRSEAVIQSPAQLSAGLLIGIEP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM-G 181
NSD G +S+ + +G LARNL +S+GDK+ ++ G
Sbjct: 121 NSDD---PLQNHLIAGRLSSLEAGQYQLFLGHTLARNLKVSMGDKVRLMVTSASQYTPLG 177
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+++TV G+F MV +L + +SG +F +DP + K
Sbjct: 178 RIPSQRNFTVAGIFNTGSDIDAQLMVTDIKDAGRLMRYKSDTISGWRLFFEDPFEVAKLS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G + DW+ + F
Sbjct: 238 N---QPLPEGWLWSDWRDQRGELFQAV 261
>gi|110805130|ref|YP_688650.1| outer membrane-specific lipoprotein transporter subunit LolC
[Shigella flexneri 5 str. 8401]
gi|110614678|gb|ABF03345.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
Length = 416
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 101/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 18 MYQPVALFIGLRYMRGRAVDRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 77
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q + L S S + +
Sbjct: 78 GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVA----PITTGDVVLQSARSVAVGVMLG 133
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ VI+G+ LA LG++ GD+I ++ P
Sbjct: 134 IDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 193
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + +++++A ++G +++ +P ++
Sbjct: 194 RIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAANITGWRLWLDEPLKVDSLS 253
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW+ R F
Sbjct: 254 ---QQKLPEGSKWQDWRDRKGELFQAV 277
>gi|326423936|ref|NP_760941.2| lipoprotein releasing system transmembrane protein LolC [Vibrio
vulnificus CMCP6]
gi|319999315|gb|AAO10468.2| Lipoprotein releasing system transmembrane protein LolC [Vibrio
vulnificus CMCP6]
Length = 401
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 58/268 (21%), Positives = 103/268 (38%), Gaps = 8/268 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RYL + F S++S G+ +GVM+L+ V+SVMNGF + +R+L
Sbjct: 1 MFHPVSIFIGLRYLRGRSGDRFSRFVSYMSTAGITVGVMSLVTVLSVMNGFEAQLKERIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ V+ P + V S S + GI
Sbjct: 61 GVLPQAVVSMDGGKTPHTTPPDFVRALSPHYQP--TPLVRSEAVIQSPSQLSVGYLIGIE 118
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S ++N G +S V +G LAR+L +S+GDK+ ++
Sbjct: 119 PSADDPIENHL--IAGRLSQLEAGKYQVFLGHFLARSLNVSMGDKVRLMVTSASQFTPLG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTH 241
I S+ + D D ++ +++A L + +SG ++ DP + +
Sbjct: 177 RIPSQRNFTVAGMFNTGSDIDGQLMVTHIEDAGRLLRLPSKTISGWRLYFDDPFQVTEAA 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
L +G DW+ + F +
Sbjct: 237 NT---PLPDGWQWSDWRAQRGELFQAVK 261
>gi|190891306|ref|YP_001977848.1| probable lipoprotein ABC transporter, permease protein [Rhizobium
etli CIAT 652]
gi|190696585|gb|ACE90670.1| probable lipoprotein ABC transporter, permease protein [Rhizobium
etli CIAT 652]
Length = 381
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 96/233 (41%), Positives = 139/233 (59%)
Query: 37 MIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKV 96
M+GV LI+VM+VMNGFR +++ R+LGINGH+++Q P DY + +RL +P V
Sbjct: 1 MLGVATLIIVMAVMNGFRTELVSRILGINGHMIVQPSDGPFTDYTDLTSRLAAVPGVKMA 60
Query: 97 LPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDL 156
LP V GQ S + G +G LVRG D + L+ F G+GV+IG +
Sbjct: 61 LPLVEGQVLASAQAGGSTGALVRGARAEDLTKLKTISGNIKSGDMVGFASGQGVLIGTGM 120
Query: 157 ARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQL 216
A LG+S+GD I + SP GD+TPMG+ R KSY + G+F + +YD+ +++M L+E+QL
Sbjct: 121 ANQLGLSVGDLITLTSPDGDITPMGVSPRVKSYKISGLFEIGMSEYDSSIIFMPLEESQL 180
Query: 217 YFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+FN E V IE+FV PD I+ + G + + DW+QR Q FFS +
Sbjct: 181 FFNAEGLVQSIELFVDHPDDIDALRSKVEEAAGRQINLTDWRQRNQTFFSALQ 233
>gi|281600532|gb|ADA73516.1| Lipoprotein-releasing system transmembrane protein lolC [Shigella
flexneri 2002017]
Length = 416
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 101/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 18 MYQPVALFIGLRYMRGRAVDRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 77
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q + L S S + +
Sbjct: 78 GLMPQAILSSEHGSLNPQQLPETAVKLDGVNRVA----PITTGDVVLQSARSVAVGVMLG 133
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ VI+G+ LA LG++ GD+I ++ P
Sbjct: 134 IDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMG 193
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D + +++++A ++G +++ +P ++
Sbjct: 194 RIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAANITGWRLWLDEPLRVDSLS 253
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW+ R F
Sbjct: 254 ---QQKLPEGSKWQDWRDRKGELFQAV 277
>gi|157146179|ref|YP_001453498.1| outer membrane-specific lipoprotein transporter subunit LolC
[Citrobacter koseri ATCC BAA-895]
gi|157083384|gb|ABV13062.1| hypothetical protein CKO_01935 [Citrobacter koseri ATCC BAA-895]
Length = 435
Score = 121 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 100/267 (37%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 37 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 96
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ + L Q + L S S + +
Sbjct: 97 GLMPQAILSSEQGSLNPQQIPEKAVTLNGVNRIA----PLTTGDVVLQSARSVAVGVMLG 152
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ VI+G+ LA LG++ GD+I ++ P
Sbjct: 153 IDPAQKDPLTPYLVNVKQTSLEPGKYNVILGEQLAGQLGVNRGDQIRVMVPSASQFTPMG 212
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ + + D + ++Q+A ++G +++ +P ++
Sbjct: 213 RLPSQRLFTVIGTFAANSEVDGYQMLTNIQDASRLMRYPAGNITGWRLWLNEPLKVDTLS 272
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW++R F
Sbjct: 273 ---QQTLPEGTKWQDWRERKGELFQAV 296
>gi|118602817|ref|YP_904032.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Candidatus Ruthia magnifica str. Cm (Calyptogena
magnifica)]
gi|118567756|gb|ABL02561.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Candidatus Ruthia magnifica str. Cm (Calyptogena
magnifica)]
Length = 411
Score = 121 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 80/265 (30%), Positives = 138/265 (52%), Gaps = 4/265 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
E ++ +YL S+RK F+S S +S +G+++ ++ LI V+SVMNGF +++ RVL
Sbjct: 1 MSIEFTISNQYLCSSRKKGFVSFISGVSMVGLILSIVTLITVLSVMNGFHKELRDRVLNA 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H I Q + ++Q + +++ P++I P++ A +S +G G+ VRGI
Sbjct: 61 ISHSYITQYNNLINNWQDLQAKINQHPNIISTSPYIEKYALLS-AKNGTQGISVRGIKPD 119
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+R +N ++IG LA LG+ I DKI +L+P +G+
Sbjct: 120 LEKKTSILLNRIKSGNANLLKSD--ILIGAGLAAQLGVIINDKITLLTPKLSSNIIGIQS 177
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
R K +T+ G+F +YDN +V++SL++AQ ++++ VSGI + V D +K + +
Sbjct: 178 RFKRFTISGIFDAGISEYDNNLVFISLEQAQKLYSMKGQVSGIRLKVDDLFNAKKITQEV 237
Query: 245 VRIL-GNGVVVIDWQQRYQIFFSCY 268
V L N IDW ++ F
Sbjct: 238 VASLQSNQYYGIDWTEQKANFIKAL 262
>gi|251789259|ref|YP_003003980.1| outer membrane-specific lipoprotein transporter subunit LolC
[Dickeya zeae Ech1591]
gi|247537880|gb|ACT06501.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Dickeya zeae Ech1591]
Length = 401
Score = 121 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 52/267 (19%), Positives = 106/267 (39%), Gaps = 6/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSAIGITLGVMALVTVLSVMNGFERELENSIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ +I L A+ L + V ++ P +G + S GV++
Sbjct: 61 GLMPQALITTPQGSLNPQTLPASSLSALKGVNRIAPLTTGDVVLQSARSVAVGVMLGINP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++ VI+G+ LA LG+ GD + ++
Sbjct: 121 DEQEPLAS--YLTKAASLQQLQPSQYQVILGEQLANQLGVKPGDHVRLMVTGASQLTPMG 178
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
+ S+ + + D + ++ Q+A +++G +++ P ++
Sbjct: 179 RVPSQRLFTVAGTFYAHSEVDGYQLLVNQQDASRLMRYAPGSITGWRLWLDQPLTVDTLS 238
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G DW++R F
Sbjct: 239 ---QQALPAGTAWKDWRERKGELFQAV 262
>gi|330967934|gb|EGH68194.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. actinidiae str. M302091]
Length = 298
Score = 121 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 74/268 (27%), Positives = 122/268 (45%), Gaps = 3/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RY + R+N F+S S S IG+ +GV+ +IVV+SVMNGF +M RVL
Sbjct: 1 MFRPLFVFIGTRYTRAKRRNHFVSFISLTSMIGLALGVVVMIVVLSVMNGFDHEMRTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I + P+ D++ +A ++ P V+ V PF Q ++ +L
Sbjct: 61 GMVPHATI-ESADPITDWRGLAAKVQENPQVLAVAPFTQMQGLLTHDGKVQKVLLNGINP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G + + G++IG A LG+ +GDK+ ++P VTP GM
Sbjct: 120 AEERKVSIIDHFIKQGQLDSLSPGSFGIMIGDKAAAKLGVVVGDKLTFVAPEVTVTPAGM 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLENAVSGIEVFVKDPDAIEKTH 241
R K + V G+F + + D + +L + + V G+ + D A +T
Sbjct: 180 FPRMKRFEVTGIFHVGAGEIDGFLGLTNLDDLARLHRWKPDQVQGLRLKFDDLFAAPRTS 239
Query: 242 ENIVRILG-NGVVVIDWQQRYQIFFSCY 268
I + LG N DW + + +
Sbjct: 240 WEIAQKLGENNFYSRDWTRTHGNLYQAI 267
>gi|238762215|ref|ZP_04623187.1| Lipoprotein-releasing system transmembrane protein lolE [Yersinia
kristensenii ATCC 33638]
gi|238699562|gb|EEP92307.1| Lipoprotein-releasing system transmembrane protein lolE [Yersinia
kristensenii ATCC 33638]
Length = 419
Score = 121 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 55/270 (20%), Positives = 110/270 (40%), Gaps = 2/270 (0%)
Query: 1 MSI-FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
M + S +++ R+ R+ +S+ S IS +G+ +GV LIV +S MNGF ++
Sbjct: 3 MGMGVSPLSLLIGLRFSRGRRRGGMVSLISVISTLGIALGVAVLIVGLSAMNGFERELKN 62
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+L + H I P + R++ +P ++ P++ + + + +
Sbjct: 63 RILAVVPHGEIAVVNQPFSGWAQTLQRIEKVPGIVAAAPYIKFTGLIENATQLRAVEVKG 122
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
S+ N + +I+GK LA LG+ G + ++ P D
Sbjct: 123 VDPESEQHLSALPSFVLDHAWDNFKAGQQQIILGKGLADALGVKQGSWLTVMIPNSDPEM 182
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+ + V G+F+ D+ + + L +AQ Y ++ ++V+GI + V D +
Sbjct: 183 KLLQPKRIRLQVAGVFQ-LSGQLDHSLALVPLTDAQQYLDMGDSVTGIAIKVDDVYNANQ 241
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ V + W Y + +
Sbjct: 242 LVRSAGEASNAYVYISSWIGTYGYMYRDIQ 271
>gi|15641886|ref|NP_231518.1| hypothetical protein VC1884 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121587308|ref|ZP_01677080.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121727145|ref|ZP_01680319.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|147675143|ref|YP_001217417.1| hypothetical protein VC0395_A1474 [Vibrio cholerae O395]
gi|153818852|ref|ZP_01971519.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|153823445|ref|ZP_01976112.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|227082014|ref|YP_002810565.1| Lipoprotein-releasing system transmembrane protein lolC [Vibrio
cholerae M66-2]
gi|229508018|ref|ZP_04397523.1| lipoprotein releasing system transmembrane protein LolC [Vibrio
cholerae BX 330286]
gi|229511743|ref|ZP_04401222.1| lipoprotein releasing system transmembrane protein LolC [Vibrio
cholerae B33]
gi|229518881|ref|ZP_04408324.1| lipoprotein releasing system transmembrane protein LolC [Vibrio
cholerae RC9]
gi|229607565|ref|YP_002878213.1| lipoprotein releasing system transmembrane protein LolC [Vibrio
cholerae MJ-1236]
gi|254848971|ref|ZP_05238321.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|298498077|ref|ZP_07007884.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|9656415|gb|AAF95032.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121548468|gb|EAX58526.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121630523|gb|EAX62915.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|126510580|gb|EAZ73174.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|126519034|gb|EAZ76257.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|146317026|gb|ABQ21565.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|227009902|gb|ACP06114.1| Lipoprotein-releasing system transmembrane protein lolC [Vibrio
cholerae M66-2]
gi|227013782|gb|ACP09992.1| Lipoprotein-releasing system transmembrane protein lolC [Vibrio
cholerae O395]
gi|229343570|gb|EEO08545.1| lipoprotein releasing system transmembrane protein LolC [Vibrio
cholerae RC9]
gi|229351708|gb|EEO16649.1| lipoprotein releasing system transmembrane protein LolC [Vibrio
cholerae B33]
gi|229355523|gb|EEO20444.1| lipoprotein releasing system transmembrane protein LolC [Vibrio
cholerae BX 330286]
gi|229370220|gb|ACQ60643.1| lipoprotein releasing system transmembrane protein LolC [Vibrio
cholerae MJ-1236]
gi|254844676|gb|EET23090.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|297542410|gb|EFH78460.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
Length = 406
Score = 121 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 56/267 (20%), Positives = 103/267 (38%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RYL + F S++S G+ IGVM+L+ V+SVMNGF + R+L
Sbjct: 5 MFHPISAFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRIL 64
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ V+ + + + + P V A V S +G+L+
Sbjct: 65 GVLPQAVVTEAAGKTTLSATPPDFVTALSTQRPPEPLVRSDAVVQSASQLAAGLLIGIEP 124
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G V+ + +G LAR+L +++GDK+ ++
Sbjct: 125 QQND---PIEQHLIAGRVTALQAGEYQLFLGHLLARSLNVTVGDKVRLMVTEASQFTPLG 181
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTH 241
+ S+ + D D ++ L++A + +SG +F DP + +
Sbjct: 182 RLPSQRNFTVAGIFNTGSDVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFDDPFVVSQLA 241
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
E + L DW+++ F
Sbjct: 242 E---QPLPQDWQWSDWREQRGELFQAV 265
>gi|254995362|ref|ZP_05277552.1| hypothetical protein AmarM_05439 [Anaplasma marginale str.
Mississippi]
Length = 408
Score = 121 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 76/263 (28%), Positives = 124/263 (47%), Gaps = 10/263 (3%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
E ++A RY+ SN S A+ +S +G+ IGV LI V SVMNGF ++ +LG+NG
Sbjct: 8 LEWLLARRYIQSNGGRFLFSTATVLSILGICIGVATLISVTSVMNGFSAKLLSSILGMNG 67
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
H+ I + + +P V+ P + GQA + ++ V+
Sbjct: 68 HITIHCNRPDYPNV---IAEIYHVPGVVSAAPVIEGQALLKYENNIMGAVVRGMHMCDIR 124
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
L R + +G+++G LA ++G GD+I I+SP T G R+
Sbjct: 125 RKLHGYVVR-----GDVDMLEEGIVLGFRLAESIGADYGDEITIISPETSPTIFGAVPRT 179
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
K+Y V G+F + +YD+ Y+ L+++QL F N + IEVF++D + I R
Sbjct: 180 KTYKVTGIFDVGVYEYDSAFAYIPLRDSQLLFGYANKIKYIEVFLEDVTKSSEALVEIAR 239
Query: 247 ILGNGVVVIDWQQRYQIFFSCYE 269
+ V DW+ + +F E
Sbjct: 240 R--TSLKVEDWKVQQGQYFRALE 260
>gi|283833505|ref|ZP_06353246.1| lipoprotein releasing system, transmembrane protein LolE
[Citrobacter youngae ATCC 29220]
gi|291071168|gb|EFE09277.1| lipoprotein releasing system, transmembrane protein LolE
[Citrobacter youngae ATCC 29220]
Length = 414
Score = 121 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 55/267 (20%), Positives = 113/267 (42%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ S +++ R+ R+ +S+ S IS +G+ +GV LIV +S MNGF ++ R+L
Sbjct: 1 MASPLSLLIGLRFSRGRRRGGMVSLISVISTVGIALGVAVLIVGLSAMNGFERELNNRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ P ++Q +++ +P ++ P+++ V ++ + +
Sbjct: 61 AVVPHGEIEAVNQPWNNWQEALDKVQKVPGIVAAAPYINFTGLVESGANLRAVQVKGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ N + +IIGK +A L + GD ++I+ P
Sbjct: 121 KQEQRLSALPSFVQNHAWDNFKAGEQQIIIGKGIADALKVKQGDWVSIMIPNASADHKLQ 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ V G+ + D+ + +++AQ Y ++ ++VSGI + V D K
Sbjct: 181 QPKRVRLHVTGILQ-LSGQLDHSFAMIPMEDAQQYLDMGSSVSGIALKVNDVFNANKLVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + N V + W Y + +
Sbjct: 240 DAGEVTNNYVYIKSWIGTYGYMYRDIQ 266
>gi|325277321|ref|ZP_08142946.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas sp. TJI-51]
gi|324097511|gb|EGB95732.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas sp. TJI-51]
Length = 414
Score = 121 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 70/266 (26%), Positives = 119/266 (44%), Gaps = 3/266 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ RY + R+N F+S S S IG+ +GV+ +IVV+SVMNGF +M RVLG+
Sbjct: 1 RPLFAFIGTRYTRAKRRNHFVSFISLTSMIGLALGVVVMIVVLSVMNGFDHEMRTRVLGM 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H + + P+ D+Q +A ++ P V+ V PF Q ++ +L
Sbjct: 61 IPHATL-ESGQPIADWQALAQQVKQNPQVVAVAPFTQMQGLLTHDGKVQKVLLNGIDPAR 119
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ G + G++IG A LG++IGDK+ ++P VTP GM
Sbjct: 120 EREVSIIDNFVLQGRLDQLAPGEWGIMIGDKAAAKLGVAIGDKLTFVAPEVSVTPAGMFP 179
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLENAVSGIEVFVKDPDAIEKTHEN 243
R K +TV+G F + + D + ++ + + V G+ + D + +
Sbjct: 180 RMKRFTVVGTFHVGAGEIDGYLGLTNISDLSRLHRWKPDQVQGLRLKFDDLFQAPRVAWS 239
Query: 244 IVRILGNG-VVVIDWQQRYQIFFSCY 268
I + LG+ DW + + +
Sbjct: 240 IAQQLGDQAFYSRDWTRTHGNLYQAI 265
>gi|255003548|ref|ZP_05278512.1| hypothetical protein AmarPR_04909 [Anaplasma marginale str. Puerto
Rico]
Length = 408
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 76/263 (28%), Positives = 124/263 (47%), Gaps = 10/263 (3%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
E ++A RY+ SN S A+ +S +G+ IGV LI V SVMNGF ++ +LG+NG
Sbjct: 8 LEWLLARRYIQSNGGRFLFSTATVLSILGICIGVATLISVTSVMNGFSAKLLSSILGMNG 67
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
H+ I + + +P V+ P + GQA + ++ V+
Sbjct: 68 HITIHCNRPDYPNV---IAEIYHVPGVVSAAPVIEGQALLKYENNIMGAVVRGMHMCDIR 124
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
L R + +G+++G LA ++G GD+I I+SP T G R+
Sbjct: 125 RKLHGYVVR-----GDVDMLEEGIVLGFRLAESIGADYGDEITIISPETSPTIFGAVPRT 179
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
K+Y V G+F + +YD+ Y+ L+++QL F N + IEVF++D + I R
Sbjct: 180 KTYKVTGIFDVGVYEYDSAFAYIPLRDSQLLFGYANRIKYIEVFLEDVTKSSEALVEIAR 239
Query: 247 ILGNGVVVIDWQQRYQIFFSCYE 269
+ V DW+ + +F E
Sbjct: 240 R--TSLKVEDWKVQQGQYFRALE 260
>gi|255004675|ref|ZP_05279476.1| hypothetical protein AmarV_05264 [Anaplasma marginale str.
Virginia]
Length = 403
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 76/263 (28%), Positives = 124/263 (47%), Gaps = 10/263 (3%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
E ++A RY+ SN S A+ +S +G+ IGV LI V SVMNGF ++ +LG+NG
Sbjct: 3 LEWLLARRYIQSNGGRFLFSTATVLSILGICIGVATLISVTSVMNGFSAKLLSSILGMNG 62
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
H+ I + + +P V+ P + GQA + ++ V+
Sbjct: 63 HITIHCNRPDYPNV---IAEIYHVPGVVSAAPVIEGQALLKYENNIMGAVVRGMHMCDIR 119
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
L R + +G+++G LA ++G GD+I I+SP T G R+
Sbjct: 120 RKLHGYVVR-----GDVDMLEEGIVLGFRLAESIGADYGDEITIISPETSPTIFGAVPRT 174
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
K+Y V G+F + +YD+ Y+ L+++QL F N + IEVF++D + I R
Sbjct: 175 KTYKVTGIFDVGVYEYDSAFAYIPLRDSQLLFGYANRIKYIEVFLEDVTKSSEALVEIAR 234
Query: 247 ILGNGVVVIDWQQRYQIFFSCYE 269
+ V DW+ + +F E
Sbjct: 235 R--TSLKVEDWKVQQGQYFRALE 255
>gi|294636789|ref|ZP_06715127.1| lipoprotein releasing system, transmembrane protein LolE
[Edwardsiella tarda ATCC 23685]
gi|291090004|gb|EFE22565.1| lipoprotein releasing system, transmembrane protein LolE
[Edwardsiella tarda ATCC 23685]
Length = 415
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 55/269 (20%), Positives = 107/269 (39%), Gaps = 3/269 (1%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + + +A R+ R+ +S+ S IS +G+ +GV LIV +S MNGF ++ +R
Sbjct: 1 MGM--PLALQIARRFSRGRRRGGMVSLISVISTVGIALGVAVLIVGLSAMNGFERELDQR 58
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+L + H I P D+ + R+ + V+ P+V+ + S V VRG
Sbjct: 59 ILSVVPHGEIYPVEQPFHDWPSVLTRVAQVKGVVGAAPYVTFTGLMEHG-SQLRAVQVRG 117
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + + + + DF G ++ + + M
Sbjct: 118 VDPAQEHQVSSLPRYVLDDAWADFHAGAQQVVLGKGVADALGVRRGDWVTVMVPNSDPQM 177
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ + + D+ + + L +AQ Y +L ++V+GI + V DP + +K
Sbjct: 178 KLLQPKRIRLQVSGILQLSGMLDHTLALVPLADAQQYQDLGDSVTGIAIKVADPFSADKV 237
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + V + W+ Y F +
Sbjct: 238 VRAAGEVTNDYVYIRSWKGTYGYMFRDIQ 266
>gi|237731100|ref|ZP_04561581.1| outer membrane-specific lipoprotein transporter subunit LolE
[Citrobacter sp. 30_2]
gi|226906639|gb|EEH92557.1| outer membrane-specific lipoprotein transporter subunit LolE
[Citrobacter sp. 30_2]
Length = 414
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 55/267 (20%), Positives = 112/267 (41%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ S +++ R+ R+ +S+ S IS +G+ +GV LIV +S MNGF ++ R+L
Sbjct: 1 MASPLSLLIGLRFSRGRRRGGMVSLISVISTVGIALGVAVLIVGLSAMNGFERELNNRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ P ++Q +++ +P ++ P+++ V ++ + +
Sbjct: 61 AVVPHGEIEAVNQPWNNWQEAFDKVQKVPGIVAAAPYINFTGLVESGANLRAVQVKGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ N + +IIGK +A L + GD ++I+ P
Sbjct: 121 KQEQRLSALPSFVQNHAWDNFKAGEQQIIIGKGIADALKVKQGDWVSIMIPNASADHKLQ 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ V G+ + D+ + +++AQ Y ++ +VSGI + V D K
Sbjct: 181 QPKRVRLHVTGILQ-LSGQLDHSFAMIPMEDAQQYLDMGTSVSGIALKVNDVFNANKLVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + N V + W Y + +
Sbjct: 240 DAGEVTNNYVYIKSWIGTYGYMYRDIQ 266
>gi|91793034|ref|YP_562685.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Shewanella denitrificans OS217]
gi|91715036|gb|ABE54962.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella denitrificans OS217]
Length = 421
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 51/273 (18%), Positives = 115/273 (42%), Gaps = 6/273 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +I+ WR+ + + N FI SF S G+ +GV LI+V+S MNGF E + R+L
Sbjct: 1 MKALLPIIIGWRFYRARQSNGFIGFISFASTAGIALGVAVLILVLSAMNGFVEQLEDRLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + P+ ++Q +A+ +P++I PF+ Q V + ++ +
Sbjct: 61 AVVSHGELVGAQGPIRNWQAMADDASLMPEIIATAPFIRLQGLVQKSGGFQALMINGIET 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + + ++ +++G+ L LG+S+GD + + +P +
Sbjct: 121 SLETKVSKIADFMPESAWASLIPAVNNIVLGESLLNKLGLSVGDSLVLYTPNMAGSEATQ 180
Query: 183 GIRSK------SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
G + V+ + ++ Y+S+ + V+G+ + + D A
Sbjct: 181 GTAGRLNTAKSHVFVVSGVYRLGGEIESSQAYVSMGYLSQLLEMGEGVTGLRLNIADVFA 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ ++ + + DW + + +
Sbjct: 241 APRVTRSLGLTQEQYLYLNDWTRTQGHLYQDIQ 273
>gi|254229018|ref|ZP_04922439.1| lipoprotein releasing system, transmembrane protein LolE [Vibrio
sp. Ex25]
gi|151938486|gb|EDN57323.1| lipoprotein releasing system, transmembrane protein LolE [Vibrio
sp. Ex25]
Length = 407
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 53/260 (20%), Positives = 105/260 (40%), Gaps = 1/260 (0%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
++ R+ + ++N +S S S IG+ +GV +I+ +S MNGF ++ RVL + H
Sbjct: 1 MIGGRFSRAKKRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQSRVLSVIPHGE 60
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
++ PL +Y N+ V+ P+V S + + + +
Sbjct: 61 LEGVNGPLHNYTKTMNQALNHEHVVAAAPYVRFTGLAEKGSKLKAIEVRGVEPTFEQAVS 120
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
S N + + VI+G+ +A L +++GD I ++ P + +
Sbjct: 121 SLSNFIDQEAWQNFYAGQQQVILGRGVANELNVAVGDYITLMIPQAGG-ANKVQAPKRVR 179
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
+ F D+ + + L +AQ Y L V+GI + D + ++
Sbjct: 180 VKVSGFLTLNGQIDHSLALVPLADAQQYARLGEGVTGISLKTDDVLNAPSIVREVGSMVD 239
Query: 250 NGVVVIDWQQRYQIFFSCYE 269
V + WQQ++ + +
Sbjct: 240 VYVYLKSWQQKFGFLYRDIQ 259
>gi|261822039|ref|YP_003260145.1| outer membrane-specific lipoprotein transporter subunit LolC
[Pectobacterium wasabiae WPP163]
gi|261606052|gb|ACX88538.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Pectobacterium wasabiae WPP163]
Length = 400
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 54/267 (20%), Positives = 103/267 (38%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRASDRFGRFVSWLSAIGITLGVMALVTVLSVMNGFERELEGNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ VI L A+ L+ + V L S S + +
Sbjct: 61 GVMPQAVISTPQGSLNPALIPASSLNSLDG---VTRIAPLTTGDVVLQSARSVAVGVMLG 117
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S I+G+ LA LG+ +GD++ ++
Sbjct: 118 IDPDEKEPLSRYLVNVKQQQLQPGQYQAILGEKLAEQLGVKMGDQVRMMVTSASQLTPMG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D+ + ++ Q+A N ++G ++++ P +++
Sbjct: 178 RIPSQRIFTVAGTFAANSEVDSYQLLVNQQDASRLMRYPANQITGWRLWLEKPLSVDTLS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G V DW++R F
Sbjct: 238 ---TQTLPEGTVWKDWRERKGELFQAV 261
>gi|253688854|ref|YP_003018044.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Pectobacterium carotovorum subsp. carotovorum PC1]
gi|251755432|gb|ACT13508.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Pectobacterium carotovorum subsp. carotovorum PC1]
Length = 400
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 56/267 (20%), Positives = 102/267 (38%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRASDRFGRFVSWLSAIGITLGVMALVTVLSVMNGFERELEDNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ VI L A+ LD + V L S S + +
Sbjct: 61 GVMPQAVISTPQGSLNPALIPASSLDSLDG---VTRIAPLTTGDVVLQSARSVAVGVMLG 117
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S VI+G+ LA L + GD+I ++
Sbjct: 118 IDPDEQEPLSRYLVNVKQQQLQPGQYQVILGEKLAAQLEVKAGDQIRMMVTSASQLTPMG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D+ + ++ Q+A N ++G ++++ P +++
Sbjct: 178 RIPSQRIFTVVGTFAANSEVDSYQLLVNQQDASRLMRYPANHITGWRLWLEKPLSVDTLS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G V DW++R F
Sbjct: 238 ---TQTLPEGTVWKDWRERKGELFQAV 261
>gi|153825230|ref|ZP_01977897.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|149741209|gb|EDM55260.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
Length = 406
Score = 120 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 55/267 (20%), Positives = 104/267 (38%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RYL + F S++S G+ IGVM+L+ V+SVMNGF + R+L
Sbjct: 5 MFHPISAFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRIL 64
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ V+ + + + + P V +A V S +G+L+
Sbjct: 65 GVLPQAVVTEAAGKTTLSATPPDFVTALSTQRPPEPLVRSEAVVQSASQLAAGLLIGIEP 124
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G ++ + +G LAR+L +++GDK+ ++
Sbjct: 125 QQND---PIEQHLIAGRLTALQAGEYQLFLGHLLARSLNVTVGDKVRLMVTEASQFTPLG 181
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTH 241
+ S+ + D D ++ L++A + +SG +F DP + +
Sbjct: 182 RLPSQRNFTVAGIFNTGSDVDGQLMVTHLRDAAKLLRYDAQTISGWRLFFDDPFVVSQLA 241
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
E + L DW+++ F
Sbjct: 242 E---QPLPQYWQWSDWREQRGELFQAV 265
>gi|317486634|ref|ZP_07945451.1| LolC/E family lipoprotein releasing system [Bilophila wadsworthia
3_1_6]
gi|316922017|gb|EFV43286.1| LolC/E family lipoprotein releasing system [Bilophila wadsworthia
3_1_6]
Length = 430
Score = 120 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 85/290 (29%), Positives = 131/290 (45%), Gaps = 25/290 (8%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
RFE+ VA RYLF+ RK AFI I S +S +GV IGV AL+VV+ V NGF D+ ++LG
Sbjct: 1 MRFELFVALRYLFARRKQAFIYIISAMSVLGVAIGVAALVVVLGVYNGFTTDIRDKILGA 60
Query: 65 NGHVVI-------QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQA------------F 105
N H+++ + + + VL ++
Sbjct: 61 NAHIIVSGPLAALTAPPSDADFEKMRGGEAPELSGMAAVLRRINATPGVVGSTPFLYAEG 120
Query: 106 VSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFD-----RGKGVIIGKDLARNL 160
+ G GV++RGI + D + GV+IGK+LA+ L
Sbjct: 121 MLSSPRGVKGVVLRGIDPKTAPDVLTMLDNLSSGSVADLNASVEGAPPGVLIGKELAQRL 180
Query: 161 GISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL 220
G+ +G ++N+LSP G T G R + Y V G+F+ +YD+ + ++SL A+ L
Sbjct: 181 GLVVGSRVNLLSPSGQKTTAGFQPRIRPYKVAGIFQTGMFEYDSSLGFISLAAARDLLGL 240
Query: 221 E-NAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ +SGIEV VKD + + + LG V W F+ +
Sbjct: 241 PSDQISGIEVTVKDVYKADTVAAALQKELGPLASVRTWMDMNANLFAALK 290
>gi|146311289|ref|YP_001176363.1| outer membrane-specific lipoprotein transporter subunit LolE
[Enterobacter sp. 638]
gi|145318165|gb|ABP60312.1| lipoprotein releasing system, transmembrane protein LolE
[Enterobacter sp. 638]
Length = 414
Score = 120 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 111/267 (41%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ S +++ R+ R+ +S+ S IS +G+ +GV LIV +S MNGF ++ R+L
Sbjct: 1 MASSLSLLIGLRFSRGRRRGGMVSLISVISTVGIALGVAVLIVGLSAMNGFERELNNRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ P ++ +++ +P + P+++ V ++ + +
Sbjct: 61 AVVPHGEIEPVNQPWNNWNDALTKIEKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G + + +IIGK +A L + GD ++I+ P
Sbjct: 121 QQEERLSALPQFVQNGAWAGFKAGDQQIIIGKGVADALKVKQGDWVSIMIPNSSADHKLQ 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ V G+ + D+ + L +A+ Y ++ ++V+GI + V D K
Sbjct: 181 QPKRVRLHVTGILQ-LSGQLDHSFAMVPLDDARQYLDMGDSVTGIAIKVNDVFNANKLVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + N V + W Y + +
Sbjct: 240 DAGGVTNNYVYIKSWIGTYGYMYRDIQ 266
>gi|227111703|ref|ZP_03825359.1| outer membrane-specific lipoprotein transporter subunit LolC
[Pectobacterium carotovorum subsp. brasiliensis PBR1692]
Length = 400
Score = 120 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 57/267 (21%), Positives = 105/267 (39%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRASDRFGRFVSWLSAIGITLGVMALVTVLSVMNGFERELEGNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ VI L A+ L+ + V +V P L S S + +
Sbjct: 61 GVMPQAVISTPQGSLNPALIPASSLNSLEGVTRVAP---LTTGDVVLQSARSVAVGVMLG 117
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S I+G+ LA LG+ GD+I ++
Sbjct: 118 IDPDEQEPLSRYLVNVKQQQLQSGQYQAILGEKLAAQLGVKAGDQIRMMVTSASQLTPMG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D+ + ++ Q+A N ++G ++++ P +++
Sbjct: 178 RIPSQRIFTVAGTFAANSEVDSYQLLVNQQDASRLMRYPANHITGWRLWLEKPLSVDTLS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G V DW++R F
Sbjct: 238 ---TQTLPEGTVWKDWRERKGELFQAV 261
>gi|37680547|ref|NP_935156.1| putative ABC transporter integral membrane subunit [Vibrio
vulnificus YJ016]
gi|37199295|dbj|BAC95127.1| putative ABC transporter integral membrane subunit [Vibrio
vulnificus YJ016]
Length = 401
Score = 120 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 58/268 (21%), Positives = 103/268 (38%), Gaps = 8/268 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RYL + F S++S G+ +GVM+L+ V+SVMNGF + +R+L
Sbjct: 1 MFHPVSIFIGLRYLRGRSGDRFSRFVSYMSTAGITVGVMSLVTVLSVMNGFEAQLKERIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ V+ P + V S S + GI
Sbjct: 61 GVLPQAVVSMDGGKTPHTTPPEFVRALSPHYKP--TPLVRSEAVIQSPSQLSVGYLIGIE 118
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S ++N G +S V +G LAR+L +S+GDK+ ++
Sbjct: 119 PSADDPIENHL--IAGRLSQLEAGKYQVFLGHSLARSLNVSMGDKVRLMVTSASQFTPLG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTH 241
I S+ + D D ++ +++A L + +SG ++ DP + +
Sbjct: 177 RIPSQRNFTVAGMFNTGSDIDGQLMVTHIEDAGRLVRLPSKTISGWRLYFDDPFQVTEAA 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
L +G DW+ + F +
Sbjct: 237 NT---PLPDGWQWSDWRAQRGELFQAVK 261
>gi|329119522|ref|ZP_08248207.1| lipoprotein ABC superfamily ATP binding cassette transporter,
membrane protein [Neisseria bacilliformis ATCC BAA-1200]
gi|327464455|gb|EGF10755.1| lipoprotein ABC superfamily ATP binding cassette transporter,
membrane protein [Neisseria bacilliformis ATCC BAA-1200]
Length = 461
Score = 120 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 67/267 (25%), Positives = 121/267 (45%), Gaps = 1/267 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
E + RYL + +++ F+S IS IG+ IGV ALIVV+SV+NGF++D+ ++
Sbjct: 47 MLSLETWIGLRYLRAKKRSGFMSFIGAISIIGIAIGVTALIVVLSVVNGFQKDVRSQLFS 106
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ H I +Q + + +V+ P+++ QA ++ L
Sbjct: 107 VAPHAEIGYYDPAGGTWQELRKLVSGNKNVVGSAPYIADQALLANNGEVRGVQLRGIEPA 166
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ YG + +I+G+DLA LG+ G K+ +++P G+VTP GM
Sbjct: 167 EEKQVADYWQKMPYGRFEDLKAGEFDIILGQDLADALGVEKGGKVTVITPEGNVTPAGMV 226
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
R K + ++G + + DN + +++AQ + E G+ + + DP
Sbjct: 227 PRLKQFNLVGTVKTGIYELDNSLAMTHIRDAQTLYRTETGFGGLRLKLADPQNAPTIVAR 286
Query: 244 IV-RILGNGVVVIDWQQRYQIFFSCYE 269
++ + V DW Q +F+ E
Sbjct: 287 LLPAAASDKVWARDWTFSNQSYFNAVE 313
>gi|261346024|ref|ZP_05973668.1| lipoprotein releasing system, transmembrane protein LolE
[Providencia rustigianii DSM 4541]
gi|282565909|gb|EFB71444.1| lipoprotein releasing system, transmembrane protein LolE
[Providencia rustigianii DSM 4541]
Length = 415
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 57/268 (21%), Positives = 113/268 (42%), Gaps = 2/268 (0%)
Query: 3 IFS-RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+ ++ A R+ R+ +S+ S +S +G+++GV LI+ +S MNGF ++ RV
Sbjct: 1 MIKMPLTLLAALRFSRGRRRTGMVSLVSIVSTLGIVLGVAVLIIGLSAMNGFERELNNRV 60
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
L + H I P D+++ + P V V P+V+ + + + ++
Sbjct: 61 LSVVPHGQIYAVEAPYNDWEYAQKIIRNTPGVQAVSPYVNFTGLLERGVNLKAIQIMGVS 120
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
++ + + +I+G+ +A +L + GD + I+ P D +
Sbjct: 121 RETESQVSALPQFILNDAWQHFEAGKQSIILGQGVANSLNVKEGDWVTIMIPNTDASMKI 180
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ V G+FR D+ + + L +AQ Y + +SG E+ DP +K
Sbjct: 181 QQPKRIRVQVTGIFR-LSGLLDHQLALIPLADAQEYLGYGDGISGFEIKATDPFEADKVV 239
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + VVV W Y ++ +
Sbjct: 240 YDAGLKTMHHVVVKSWIGDYGYMYNDIQ 267
>gi|56417192|ref|YP_154266.1| hypothetical protein AM1183 [Anaplasma marginale str. St. Maries]
gi|56388424|gb|AAV87011.1| hypothetical protein AM1183 [Anaplasma marginale str. St. Maries]
Length = 408
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 76/263 (28%), Positives = 124/263 (47%), Gaps = 10/263 (3%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
E ++A RY+ SN S A+ +S +G+ IGV LI V SVMNGF ++ +LG+NG
Sbjct: 8 LEWLLARRYIQSNGGRFLFSTATVLSILGICIGVATLISVTSVMNGFSAKLLSSILGMNG 67
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
H+ I + + +P V+ P + GQA + ++ V+
Sbjct: 68 HITIHCNRPDYPNV---IAEIYHVPGVVSAAPVIEGQALLKYENNIMGAVVRGMHMCDIR 124
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
L R + +G+++G LA ++G GD+I I+SP T G R+
Sbjct: 125 RKLHGYVVR-----GDVDMLEEGIVLGFRLAESIGADYGDEITIISPETSPTIFGAVPRT 179
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
K+Y V G+F + +YD+ Y+ L+++QL F N + IEVF++D + I R
Sbjct: 180 KTYKVTGIFDVGVYEYDSAFAYIPLRDSQLLFGYANRIKYIEVFLEDVTKSSEALVEIAR 239
Query: 247 ILGNGVVVIDWQQRYQIFFSCYE 269
+ V DW+ + +F E
Sbjct: 240 R--TSLKVEDWKVQQGQYFRALE 260
>gi|290510828|ref|ZP_06550198.1| lipoprotein releasing system, transmembrane protein LolE
[Klebsiella sp. 1_1_55]
gi|289777544|gb|EFD85542.1| lipoprotein releasing system, transmembrane protein LolE
[Klebsiella sp. 1_1_55]
Length = 414
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 57/267 (21%), Positives = 112/267 (41%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ S +++A R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ RVL
Sbjct: 1 MASPLSLLIALRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ P ++Q ++ + ++ P+++ V S+ + +
Sbjct: 61 AVVPHGEIEPVNQPWNNWQEALAKVQKVKGIVAAAPYINFTGLVESGSNMRAIQVKGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + VI+GK +A L + GD ++I+ P D +
Sbjct: 121 QQETRLSALPTFVQNNAWAGFKAGEQQVILGKGVADALHVKQGDWVSIMIPNADADHQLL 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ V G+ + D+ + +Q+AQ Y + +V+GI + V D K
Sbjct: 181 QPKRVRLHVTGILQ-LSGQLDHSFAMIPMQDAQQYLEMGGSVTGIAIKVTDVFHANKLVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|225619121|ref|YP_002720347.1| LolC/E family lipoprotein releasing system protein [Brachyspira
hyodysenteriae WA1]
gi|225213940|gb|ACN82674.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Brachyspira hyodysenteriae WA1]
Length = 430
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 53/261 (20%), Positives = 106/261 (40%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
++ RYL + +K +F+SI + I +G+++G M +I V+SVMNGF++D+ ++LG+ H+
Sbjct: 1 MLGVRYLRAKKKFSFVSIITIICVLGILVGDMVMITVLSVMNGFQDDIRDKILGMRAHIN 60
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
I + I + + + VR ++ F+
Sbjct: 61 ISAYSDQPLTDYKYVVDNIMNNKEITSAYPYIVLPCIMRSYGFTTLITVRSFEDNIFTTD 120
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
++ F N+ D + + G + ++
Sbjct: 121 KDFIKYFNFVEGNNKDMNTNDALIGSEMAKDYALSIGDTIDIISASGSFERGFKPQKTTF 180
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
T+ G+++ + +YD+ MV + L Q +NAV+G+ V V++ +K + I L
Sbjct: 181 TIKGIYKTGYYEYDSRMVIVPLTTGQKMVGYDNAVTGVAVKVRNFFDADKVAKKIDTDLK 240
Query: 250 NGVVVIDWQQRYQIFFSCYES 270
V+ W + FF +
Sbjct: 241 EFYNVMPWMLFDRNFFQALHT 261
>gi|269967621|ref|ZP_06181671.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|269827708|gb|EEZ81992.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
Length = 407
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 52/260 (20%), Positives = 105/260 (40%), Gaps = 1/260 (0%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
++ R+ + ++N +S S S IG+ +GV +I+ +S MNGF ++ RVL + H
Sbjct: 1 MIGGRFSRAKKRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQSRVLSVIPHGE 60
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
++ PL DY N+ V+ P+V S + + + +
Sbjct: 61 LEGVNGPLHDYTKTMNQALKHEHVVAAAPYVRFTGLAEKGSKLKAIEVRGVEPTFEQAVS 120
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
S N + + VI+G+ +A L +++GD + ++ P + +
Sbjct: 121 SLSNFIDQEAWQNFYAGQQQVILGRGVANELNVAVGDYVTLMIPQTGG-ANKVQAPKRVR 179
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
+ F D+ + + L +A+ Y L V+GI + D + ++
Sbjct: 180 VKVSGFLTLNGQIDHSLALVPLADAKQYARLGEGVTGISLKTDDVLNAPSIVREVGSMVD 239
Query: 250 NGVVVIDWQQRYQIFFSCYE 269
V + WQQ++ + +
Sbjct: 240 VYVYLKSWQQKFGFLYRDIQ 259
>gi|152969669|ref|YP_001334778.1| outer membrane-specific lipoprotein transporter subunit LolE
[Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|150954518|gb|ABR76548.1| putative kinase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
Length = 414
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 57/267 (21%), Positives = 112/267 (41%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ S +++A R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ RVL
Sbjct: 1 MASPLSLLIALRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ P ++Q ++ + ++ P+++ V S+ + +
Sbjct: 61 AVVPHGEIEPVNQPWNNWQEALAKVQKVKGIVAAAPYINFTGLVESGSNMRAIQVKGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + VI+GK +A L + GD ++I+ P D +
Sbjct: 121 QQESQLSALPTFVQNNAWAGFKAGEQQVILGKGVADALHVKQGDWVSIMIPNADADHQLL 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ V G+ + D+ + +Q+AQ Y + +V+GI + V D K
Sbjct: 181 QPKRVRLHVTGILQ-LSGQLDHSFAMIPMQDAQQYLEMGGSVTGIAIKVTDVFHANKLVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|311279975|ref|YP_003942206.1| lipoprotein releasing system, transmembrane protein LolE
[Enterobacter cloacae SCF1]
gi|308749170|gb|ADO48922.1| lipoprotein releasing system, transmembrane protein LolE
[Enterobacter cloacae SCF1]
Length = 414
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 47/267 (17%), Positives = 101/267 (37%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ S +++ R+ R+ +S+ S IS +G+ +GV LIV +S MNGF ++ R+L
Sbjct: 1 MASPLSLLIGLRFSRGRRRGGMVSLISVISTVGIALGVAVLIVGLSAMNGFERELNNRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ + P +++ ++ + + P+++ + S + V+G+
Sbjct: 61 AVVPHGEIEPVHQPWNNWRDALAKVQKVKGIAAAAPYINFTGLIESG-SNLRAIQVKGVD 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ L N DF G II + + +
Sbjct: 120 PVEEMQLSALPKYVQNNAWADFKAGGQQIILGKGVADALKVKQGDWVSIMIPNSDAEHQL 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + + +AQ Y ++ ++V+GI + V D K
Sbjct: 180 LQPKRVRLHVAGILQLSGQLDHSFAMIPMADAQQYLDMGSSVTGIAIKVNDVFNANKLVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|50120753|ref|YP_049920.1| outer membrane-specific lipoprotein transporter subunit LolC
[Pectobacterium atrosepticum SCRI1043]
gi|49611279|emb|CAG74726.1| lipoprotein releasing system transmembrane protein [Pectobacterium
atrosepticum SCRI1043]
Length = 400
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 57/267 (21%), Positives = 106/267 (39%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRASDRFGRFVSWLSAIGITLGVMALVTVLSVMNGFERELEGNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ VI L A+ LD + V +V P L S S + +
Sbjct: 61 GVMPQAVISTPQGSLNPVLIPASSLDSLEGVTRVAP---LTTGDVVLQSARSVAVGVMLG 117
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S I+G+ LA LG++ GD++ ++
Sbjct: 118 IDPDEKEPLSRYLVNVKQQQLQPGQYQAILGEKLAEQLGVNTGDQVRMMVTSASQLTPMG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D+ + ++ Q+A N ++G ++++ P +++
Sbjct: 178 RIPSQRIFTVAGTFAANSEVDSYQLLVNQQDASRLMRYPANHITGWRLWLEKPLSVDTLS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G V DW++R F
Sbjct: 238 ---TQTLPEGTVWKDWRERKGELFQAV 261
>gi|268589236|ref|ZP_06123457.1| lipoprotein releasing system, transmembrane protein LolE
[Providencia rettgeri DSM 1131]
gi|291315494|gb|EFE55947.1| lipoprotein releasing system, transmembrane protein LolE
[Providencia rettgeri DSM 1131]
Length = 415
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 54/264 (20%), Positives = 112/264 (42%), Gaps = 1/264 (0%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
++ A R+ R+ +S+ S +S +G+++GV LI+ +S MNGF ++ RVL +
Sbjct: 5 PLSLVTALRFSRGRRRTGMVSLVSIVSTLGIVLGVAVLIIGLSAMNGFERELNNRVLSVV 64
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
H I P + +F + P V V P+++ + ++ + ++ +
Sbjct: 65 PHGQIFAVKPPYKNLEFAEQVIRKTPGVEGVSPYINFTGLLERGANLKAIQVMGVSRETQ 124
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ + +I+G+ +A L + +GD + I+ P D + +
Sbjct: 125 PQVSALPQFILNDAWQHFDAGKQSIILGQGVADALNVKVGDWVTIMIPNTDASLKIQQPK 184
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
V G+F+ D+ + + L +AQ Y + + V+G E+ DP ++ +
Sbjct: 185 RIRVQVTGIFK-LSGLLDHQLALVPLADAQEYLDYGDGVTGFEIKATDPFIADQVVYDAG 243
Query: 246 RILGNGVVVIDWQQRYQIFFSCYE 269
+ VVV W Y ++ +
Sbjct: 244 LKTMHHVVVKSWIGDYGYMYNDIQ 267
>gi|254508512|ref|ZP_05120630.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
parahaemolyticus 16]
gi|219548537|gb|EED25544.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
parahaemolyticus 16]
Length = 402
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 54/267 (20%), Positives = 103/267 (38%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RYL + F S++S G+ IGVM+L+ V+SVMNGF + R+L
Sbjct: 1 MFHPVSAFIGLRYLRGRSGDRFSRFVSYMSTAGITIGVMSLVTVLSVMNGFEAQLKSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ + + + P V +A + S +G+L+
Sbjct: 61 GVLPQAIVSEVDGKTHRQGVAPEFVSELSTAAHPEPIVQSEAVIQSASQLSAGLLIGIKP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G ++ + IG LAR++ +S+GDK+ ++
Sbjct: 121 SDHD---PIEDHMIAGRLAAMEAGQYQLFIGHTLARSMDVSVGDKVRLMVTSASQFTPLG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAV-SGIEVFVKDPDAIEKTH 241
+ S+ + D D ++ + +A ++N +G +F DP + +
Sbjct: 178 RMPSQRIFTIAGIYNTGSDVDGLLMLTHIDDAAKLNRMKNDTMTGWRLFFNDPFVVAQLS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
E + L G DW+ + F
Sbjct: 238 E---QPLPKGWQWQDWRDQRGELFQAV 261
>gi|238749647|ref|ZP_04611152.1| Lipoprotein-releasing system transmembrane protein lolE [Yersinia
rohdei ATCC 43380]
gi|238712302|gb|EEQ04515.1| Lipoprotein-releasing system transmembrane protein lolE [Yersinia
rohdei ATCC 43380]
Length = 415
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 56/265 (21%), Positives = 110/265 (41%), Gaps = 1/265 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
S +++ R+ R+ +S+ S IS +G+ +GV LIV +S MNGF ++ R+L +
Sbjct: 4 SPLSLLIGLRFSRGRRRGGMVSLISVISTLGIALGVAVLIVGLSAMNGFERELKNRILAV 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H I P D+ R++ +P ++ P+++ + + + + S
Sbjct: 64 VPHGEIAVVNQPFSDWSATLQRIEKVPGILSAAPYITFTGLIENATQLRAVQVKGVDPQS 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ N + +I+GK LA LG+ G + ++ P D +
Sbjct: 124 EQQLSALPSFVLDHAWDNFKAGHQQIILGKGLADALGVKQGSWLTVMIPNSDPEMKLLQP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ V G+F D+ + + L +AQ Y ++ ++V+GI + V D K +
Sbjct: 184 KRIRLQVAGVFE-LSGQLDHSLALVPLADAQQYLDMGDSVTGIAIKVDDVYNANKLVRSA 242
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ V + W Y + +
Sbjct: 243 GEVTNAYVYISSWIGTYGYMYRDIQ 267
>gi|86357258|ref|YP_469150.1| lipoprotein ABC transporter, permease protein [Rhizobium etli CFN
42]
gi|86281360|gb|ABC90423.1| probable lipoprotein ABC transporter, permease protein [Rhizobium
etli CFN 42]
Length = 381
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 94/233 (40%), Positives = 136/233 (58%)
Query: 37 MIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKV 96
M+GV LI+VM+VMNGFR +++ R+LGINGH+++Q P DY + +L +P V
Sbjct: 1 MLGVATLIIVMAVMNGFRTELVSRILGINGHMIVQPVDGPFTDYPELTAKLAAVPGVRMA 60
Query: 97 LPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDL 156
LP V GQ S + G +G LVRG D + L+ + G+GV+IG +
Sbjct: 61 LPLVEGQVLASAQAGGSTGALVRGARAEDLTKLKTISDNIKSGDMVGYASGEGVLIGTRM 120
Query: 157 ARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQL 216
A LG+ +GD I + SP GD+TPMG+ R KSY + G+F + +YD+ +++M L+EAQL
Sbjct: 121 ADQLGLRVGDLITLTSPEGDITPMGVNPRVKSYKISGLFEIGMSEYDSSIIFMPLEEAQL 180
Query: 217 YFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
YFN V IE+FV PD I+ + G + + DW+QR Q FFS +
Sbjct: 181 YFNAAGLVQSIELFVDHPDDIDALRPKVEEAAGRQINLTDWRQRNQTFFSALQ 233
>gi|152996168|ref|YP_001341003.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Marinomonas sp. MWYL1]
gi|150837092|gb|ABR71068.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Marinomonas sp. MWYL1]
Length = 414
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 67/267 (25%), Positives = 116/267 (43%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + RY + R N FIS SF S G+ +GVM LI V+SVMNGF ++ +R+L
Sbjct: 1 MINFLPFAIGLRYARAKRSNHFISFISFSSIAGLALGVMVLITVLSVMNGFDRELRQRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H + L D++ A + +PDV+ V P + Q S +L
Sbjct: 61 GMVPHATLWGDP-VLNDWRDTAKLVAKMPDVVGVAPHIQAQVMFQSGESVHGAILNGINP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + G++ D G+++G LA+ L ++IGDK+ + P +V+ G+
Sbjct: 120 DMEKKVSIIGDNIASGSLDALKDTSFGIVLGAQLAKMLRVNIGDKVTAILPKANVSIAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
K +TV+G F + + A+L + V + + D
Sbjct: 180 APVLKRFTVVGTFEVGAELDSSLAYINIADAAKLKRYKADDVEALRISFDDLFVAPSRIW 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+I R + V DW + + F +
Sbjct: 240 DIARAVPGQNRVSDWTRTHGSLFQAIK 266
>gi|238894152|ref|YP_002918886.1| outer membrane-specific lipoprotein transporter subunit LolE
[Klebsiella pneumoniae NTUH-K2044]
gi|238546468|dbj|BAH62819.1| ABC transport system integral membrane component [Klebsiella
pneumoniae subsp. pneumoniae NTUH-K2044]
Length = 414
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 57/267 (21%), Positives = 114/267 (42%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ S +++A R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ RVL
Sbjct: 1 MASPLSLLIALRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ P ++Q ++ + ++ P+++ V S+ + +
Sbjct: 61 AVVPHGEIEPVNQPWNNWQEALAKVQKVKGIVAAAPYINFTGLVESGSNMRAIQVKGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + VI+GK +A L + GD ++I+ P D +
Sbjct: 121 QQESQLSALPTFVQNNAWAGFKAGEQQVILGKGVADALHVKQGDWVSIMIPNADADHQLL 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ V G+ + D+ + +Q+AQ Y ++ ++V+GI + V D K
Sbjct: 181 QPKRVRLHVTGILQ-LSGQLDHSFAMIPMQDAQQYLDMGSSVTGIAIKVTDVFHANKLVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|303251813|ref|ZP_07337984.1| outer membrane-specific lipoprotein transporter subunit LolE
[Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|307249113|ref|ZP_07531120.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 2 str. S1536]
gi|302649243|gb|EFL79428.1| outer membrane-specific lipoprotein transporter subunit LolE
[Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|306854401|gb|EFM86597.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 2 str. S1536]
Length = 416
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 49/265 (18%), Positives = 102/265 (38%), Gaps = 3/265 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY +KN +S+ S S IG+ +GV LI+ +S MNGF ++ +RVL + H
Sbjct: 4 PFFISWRYQRGKQKNRLVSLISLFSSIGIALGVAVLIIGLSAMNGFERELNQRVLSVVPH 63
Query: 68 VVIQQKYYPLVDYQF---IANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ L + + + VRG+
Sbjct: 64 AELYSYNGNENAPIQAGKKLENLANSNPNVTASSPFVSFTGLIENGTQLKIAQVRGVDPV 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + F + G+I+G +A++L ++ GD++ +L P
Sbjct: 124 KQDKVSSLSHYIPSEQWQAFHQQGGLILGAGIAKDLEVAAGDEVTLLLPQPTEDGKLAQP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
S V G+ ++ + + + +L N SGIE+ +K+P +++
Sbjct: 184 LRFSLPVTGVLKLEGQLDHSYALLPIEKAQELLEYQPNEYSGIELALKEPFKVQELQMPE 243
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + W +++ ++ +
Sbjct: 244 LANFNQPLYLNTWIEKFGYMYNDIQ 268
>gi|284007309|emb|CBA72652.1| lipoprotein releasing system, transmembrane protein [Arsenophonus
nasoniae]
Length = 400
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 106/267 (39%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + RY+ + F S +S IG+ +GVMALI V +VMNGF + + +L
Sbjct: 1 MSQSVIFYIGLRYMRGRTGDRFGRFVSSLSTIGIALGVMALITVTAVMNGFERSLQQSIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
++ L ++ A + ++ + ++ P V + + G V++
Sbjct: 61 AYMPQAILTTPKGNLNPSEYPAKNVTYLQGIDRIAPIVESDVVLQSRQNVGVAVMIGVDE 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S L+ + + VI+G LA L + GD++ ++ P
Sbjct: 121 ASSEPLLK---HLQDVDPTVLTAGSYHVILGIKLAEQLEVKRGDQLRLIVPGVSQLTPMG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + DN + ++ Q+A ++G +++ P ++
Sbjct: 178 RIPSQRLFTVAGVFASQGEADNSELLVNQQDAARLMRYPIGNITGWRLYLDSPLTVDSLS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
E + L G++ DW++R FF
Sbjct: 238 E---QTLPVGMIWKDWRERKGEFFQAV 261
>gi|153949780|ref|YP_001400579.1| outer membrane-specific lipoprotein transporter subunit LolE
[Yersinia pseudotuberculosis IP 31758]
gi|152961275|gb|ABS48736.1| lipoprotein releasing system, transmembrane protein LolE [Yersinia
pseudotuberculosis IP 31758]
Length = 415
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 55/265 (20%), Positives = 112/265 (42%), Gaps = 1/265 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
S +++ R+ R+ +S+ S IS +G+ +GV LIV +S MNGF ++ R+L +
Sbjct: 4 SPLSLLIGLRFSRGRRRGGMVSLISVISTLGIALGVAVLIVGLSAMNGFERELKNRILAV 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H I P + R++ +P ++ P+++ + + + + +
Sbjct: 64 VPHGEIAVVNQPFSGWPQTLQRIEKVPGIVAAAPYINFTGLIENSTQLRAVQVKGVDPEA 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ S+ + +I+GK LA LG+ GD + ++ P D +
Sbjct: 124 EQHLSALPSFVLDNAWSHFKAGQQQIILGKGLADTLGVKQGDWLTVMIPNSDPEMKLLQP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ V G+F+ D+ + + L +AQ Y ++ ++V+GI + V D + N
Sbjct: 184 KRIRLQVAGIFQ-LSGQLDHSLALVPLIDAQQYLDMGDSVTGIAIKVNDVYNANQLVRNA 242
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ V + W Y + +
Sbjct: 243 GEVSNAYVYISSWIGTYGYMYRDIQ 267
>gi|237808982|ref|YP_002893422.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Tolumonas auensis DSM 9187]
gi|237501243|gb|ACQ93836.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Tolumonas auensis DSM 9187]
Length = 413
Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 60/267 (22%), Positives = 110/267 (41%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F F + + RY + R + F+S S S IG+ +GVMALI+ +S MNGF ++ +RVL
Sbjct: 1 MFQPFALFLGLRYSRTRRSSRFVSFISASSIIGIALGVMALILGLSAMNGFERELRQRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H ++ D+Q + L P + V P +S + + L +
Sbjct: 61 AVIPHAEVEMVSGGFSDWQSASALLKKQPGITAVAPLISLNGMLEAGGKMKAAQLRAVLP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ Q + + GVI+G+ +A LG+ IGD + + P
Sbjct: 121 AEEKQISQAAEYMTGSGLDALLPGENGVILGQQIADKLGVKIGDSVTMQVPDKQAQSAFS 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ +TV+G+ ++ + Y+ LQ+AQ ++ V G+ + V D +
Sbjct: 181 APMQRQFTVVGLLKLGGQLDGF-LGYIHLQDAQAMLGWQDEVQGLSIEVNDVLSAHTIAY 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
L + + W + +
Sbjct: 240 QAANQLPYRMYLRSWMTSQGYLYQDIQ 266
>gi|296125330|ref|YP_003632582.1| hypothetical protein Bmur_0277 [Brachyspira murdochii DSM 12563]
gi|296017146|gb|ADG70383.1| protein of unknown function DUF214 [Brachyspira murdochii DSM
12563]
Length = 431
Score = 119 bits (297), Expect = 5e-25, Method: Composition-based stats.
Identities = 54/261 (20%), Positives = 105/261 (40%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
++ RYL + +K +F+S+ + I +G+++G M +I V+SVMNGF++D+ ++LG+ H+
Sbjct: 1 MLGVRYLRAKKKFSFVSVITIICVLGILVGDMVMITVLSVMNGFQDDIRDKILGMRAHIN 60
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
I + I + + + VR ++ FS
Sbjct: 61 ISSYSDGAISDYKYVVDNIMDNKDITSAYPYIVIPCIMRSYNFTILITVRSFEDNIFSTD 120
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
++ F N+ D + + G + ++
Sbjct: 121 KDFIKYFNFVEGNNKDMKTNEALIGSEMAKDYALSVGDTIDIISASGSFDRGFKPQKTTF 180
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
T+ G+++ + +YD+ MV + L Q NAV+G+ V VK+ +K + I L
Sbjct: 181 TIKGVYKTGYYEYDSRMVIVPLSAGQSMVGYSNAVTGVAVKVKNFFDADKVAKQIDSDLK 240
Query: 250 NGVVVIDWQQRYQIFFSCYES 270
V+ W + FF +
Sbjct: 241 EFYNVMPWMLFDRNFFQALHT 261
>gi|22125681|ref|NP_669104.1| outer membrane-specific lipoprotein transporter subunit LolE
[Yersinia pestis KIM 10]
gi|45441568|ref|NP_993107.1| outer membrane-specific lipoprotein transporter subunit LolE
[Yersinia pestis biovar Microtus str. 91001]
gi|149366407|ref|ZP_01888441.1| lipoprotein releasing system, transmembrane protein [Yersinia
pestis CA88-4125]
gi|218928764|ref|YP_002346639.1| outer membrane-specific lipoprotein transporter subunit LolE
[Yersinia pestis CO92]
gi|21958595|gb|AAM85355.1|AE013781_6 putative kinase [Yersinia pestis KIM 10]
gi|45436429|gb|AAS61984.1| lipoprotein releasing system, transmembrane protein [Yersinia
pestis biovar Microtus str. 91001]
gi|115347375|emb|CAL20273.1| lipoprotein releasing system, transmembrane protein [Yersinia
pestis CO92]
gi|149290781|gb|EDM40856.1| lipoprotein releasing system, transmembrane protein [Yersinia
pestis CA88-4125]
Length = 416
Score = 119 bits (297), Expect = 5e-25, Method: Composition-based stats.
Identities = 56/269 (20%), Positives = 113/269 (42%), Gaps = 1/269 (0%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M S +++ R+ R+ +S+ S IS +G+ +GV LIV +S MNGF ++ R
Sbjct: 1 MMGVSPLSLLIGLRFSRGRRRGGMVSLISVISTLGIALGVAVLIVGLSAMNGFERELKNR 60
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+L + H I P + R++ +P ++ P+++ + + + +
Sbjct: 61 ILAVVPHGEIAVVNQPFSGWPQTLQRIEKVPGIVAAAPYINFTGLIENSTQLRAVQVKGV 120
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
++ S+ + +I+GK LA LG+ GD + ++ P D
Sbjct: 121 DPEAEQHLSALPSFVLDNAWSHFKAGQQQIILGKGLADTLGVKQGDWLTVMIPNSDPEMK 180
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ + V G+F+ D+ + + L +AQ Y ++ ++V+GI + V D +
Sbjct: 181 LLQPKRIRLQVAGIFQ-LSGQLDHSLALVPLIDAQQYLDMGDSVTGIAIKVNDVYNANQL 239
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
N + V + W Y + +
Sbjct: 240 VRNAGEVSNAYVYISSWIGTYGYMYRDIQ 268
>gi|53729138|ref|ZP_00348325.1| COG4591: ABC-type transport system, involved in lipoprotein
release, permease component [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126209490|ref|YP_001054715.1| outer membrane-specific lipoprotein transporter subunit LolE
[Actinobacillus pleuropneumoniae L20]
gi|126098282|gb|ABN75110.1| lipoprotein-releasing system transmembrane protein [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
Length = 416
Score = 119 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 48/265 (18%), Positives = 102/265 (38%), Gaps = 3/265 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY +KN +S+ S S +G+ +GV LI+ +S MNGF ++ +RVL + H
Sbjct: 4 PFFISWRYQRGKQKNRLVSLISLFSSVGIALGVAVLIIGLSAMNGFERELNQRVLSVVPH 63
Query: 68 VVIQQKYYPLVDYQF---IANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ L + + + VRG+
Sbjct: 64 AELYSYNGNENAPIQAGKKLENLANSNPNVTASSPFVSFTGLIENGTQLKIAQVRGVDPV 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + F + G+I+G +A++L ++ GD++ +L P
Sbjct: 124 KQDKVSSLSHYIPSEQWQAFHQQGGLILGAGIAKDLEVAAGDEVTLLLPQPTEDGKLAQP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
S V G+ ++ + + + +L N SGIE+ +K+P +++
Sbjct: 184 LRFSLPVTGVLKLEGQLDHSYALLPIEKAQELLEYQPNEYSGIELALKEPFKVQELQMPE 243
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + W +++ ++ +
Sbjct: 244 LANFNQPLYLNTWIEKFGYMYNDIQ 268
>gi|326795251|ref|YP_004313071.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Marinomonas mediterranea MMB-1]
gi|326546015|gb|ADZ91235.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Marinomonas mediterranea MMB-1]
Length = 413
Score = 119 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 68/267 (25%), Positives = 120/267 (44%), Gaps = 3/267 (1%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ V + RY + RKN FIS SF S G+ +GV LI V+SVMNGF ++ +R+LG
Sbjct: 1 MNLLPVKIGLRYARAKRKNHFISFISFSSIAGLALGVAVLITVLSVMNGFDRELRQRILG 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ H + L D++ A + +P V+ V P Q +L +
Sbjct: 61 MVPHATVWGDP-TLTDWKSTAEMVSKMPGVVGVAPHTQAQVMFQSTRGVHGALLNGIDPD 119
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + G++S ++ G+++G LAR LG+S+GDK+ L P +V+ G+
Sbjct: 120 MEAKISILDENMKSGSLSALNEKHFGIVLGAQLARMLGVSVGDKVTALLPKANVSIAGVT 179
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHE 242
K +TV+G F + D+ + Y+++ A V + + ++
Sbjct: 180 PTLKRFTVVGTF-SVGAELDSSLAYINIAGAAKLKRYPAGKVEALRISFENLFDAPTKIW 238
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+I R + + DW + + F +
Sbjct: 239 DIARAVPGQNRISDWTRTHGNLFQAIQ 265
>gi|238789091|ref|ZP_04632880.1| Lipoprotein-releasing system transmembrane protein lolE [Yersinia
frederiksenii ATCC 33641]
gi|238722855|gb|EEQ14506.1| Lipoprotein-releasing system transmembrane protein lolE [Yersinia
frederiksenii ATCC 33641]
Length = 415
Score = 119 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 54/265 (20%), Positives = 108/265 (40%), Gaps = 1/265 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
S +++ R+ R+ +S+ S IS +G+ +GV LIV +S MNGF ++ R+L +
Sbjct: 4 SPLSLLIGLRFSRGRRRGGMVSLISVISTLGIALGVAVLIVGLSAMNGFERELKNRILAV 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H I P + R++ +P ++ P+++ + + + + +
Sbjct: 64 VPHGEIAVVNQPFSGWPETLQRIEKVPGIVAAAPYINFTGLIENATQLRAVSVKGVDPEA 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ N + +I+GK LA LG+ G + ++ P D +
Sbjct: 124 EQHLSALPSFVLGNAWDNFKAGQQQIILGKGLADALGVKQGSWLTVMIPNSDPEMKLLQP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ V G+F D+ + + L +AQ Y + ++V+GI + V D K +
Sbjct: 184 KRIRLQVAGVFE-LSGQLDHSLALVPLADAQQYLEMGDSVTGIAIKVDDVYNANKLVRSA 242
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ V + W Y + +
Sbjct: 243 GEVTNAYVYISSWIGTYGYMYRDIQ 267
>gi|289548944|ref|YP_003473932.1| hypothetical protein Thal_1173 [Thermocrinis albus DSM 14484]
gi|289182561|gb|ADC89805.1| protein of unknown function DUF214 [Thermocrinis albus DSM 14484]
Length = 392
Score = 119 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 64/261 (24%), Positives = 123/261 (47%), Gaps = 13/261 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
++A RYL S+R + + S ++ +GV +GV A+++ M+V GF+ + ++L + HV
Sbjct: 5 FVIALRYLLSSRGSTLV--VSGVALLGVALGVSAVLLTMAVFAGFQHALKDKILASSPHV 62
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
V+ + A + + +K + V L S + + +
Sbjct: 63 VVSLMT------EKDARDVRSVIQKVKGVRSVKLVTVYQALLSYNGRIQSITVKGMEPED 116
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+++ KG+++G+ +A LG+ IGDK+ ++SP G TP+G ++ +
Sbjct: 117 IRSMEKFLVKGK-----LEKGLLLGEGVADVLGVKIGDKVVLVSPMGIRTPLGFLPKTAT 171
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ V G+F+ + D V + LQEAQ +F + + G EV++ DP ++ NI IL
Sbjct: 172 FEVAGIFKTGTFEQDYLTVILPLQEAQRFFGDDWQMRGFEVYLYDPYKADEIKRNISDIL 231
Query: 249 GNGVVVIDWQQRYQIFFSCYE 269
+ +V W F+ +
Sbjct: 232 QDDAIVRSWMDLNAPLFNALQ 252
>gi|108807892|ref|YP_651808.1| outer membrane-specific lipoprotein transporter subunit LolE
[Yersinia pestis Antiqua]
gi|108812166|ref|YP_647933.1| outer membrane-specific lipoprotein transporter subunit LolE
[Yersinia pestis Nepal516]
gi|145599103|ref|YP_001163179.1| outer membrane-specific lipoprotein transporter subunit LolE
[Yersinia pestis Pestoides F]
gi|162419757|ref|YP_001607242.1| outer membrane-specific lipoprotein transporter subunit LolE
[Yersinia pestis Angola]
gi|165925540|ref|ZP_02221372.1| lipoprotein releasing system, transmembrane protein LolE [Yersinia
pestis biovar Orientalis str. F1991016]
gi|165938473|ref|ZP_02227030.1| lipoprotein releasing system, transmembrane protein LolE [Yersinia
pestis biovar Orientalis str. IP275]
gi|166008546|ref|ZP_02229444.1| lipoprotein releasing system, transmembrane protein LolE [Yersinia
pestis biovar Antiqua str. E1979001]
gi|166210930|ref|ZP_02236965.1| lipoprotein releasing system, transmembrane protein LolE [Yersinia
pestis biovar Antiqua str. B42003004]
gi|167401719|ref|ZP_02307210.1| lipoprotein releasing system, transmembrane protein LolE [Yersinia
pestis biovar Antiqua str. UG05-0454]
gi|167421837|ref|ZP_02313590.1| lipoprotein releasing system, transmembrane protein LolE [Yersinia
pestis biovar Orientalis str. MG05-1020]
gi|167426331|ref|ZP_02318084.1| lipoprotein releasing system, transmembrane protein LolE [Yersinia
pestis biovar Mediaevalis str. K1973002]
gi|167469311|ref|ZP_02334015.1| lipoprotein releasing system, transmembrane protein LolE [Yersinia
pestis FV-1]
gi|229841614|ref|ZP_04461772.1| outer membrane-specific lipoprotein transporter subunit; membrane
component of ABC superfamily [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229843731|ref|ZP_04463874.1| outer membrane-specific lipoprotein transporter subunit; membrane
component of ABC superfamily [Yersinia pestis biovar
Orientalis str. India 195]
gi|229894474|ref|ZP_04509656.1| outer membrane-specific lipoprotein transporter subunit; membrane
component of ABC superfamily [Yersinia pestis Pestoides
A]
gi|229902487|ref|ZP_04517606.1| outer membrane-specific lipoprotein transporter subunit; membrane
component of ABC superfamily [Yersinia pestis Nepal516]
gi|270490334|ref|ZP_06207408.1| lipoprotein releasing system, transmembrane protein LolE [Yersinia
pestis KIM D27]
gi|294504174|ref|YP_003568236.1| lipoprotein releasing system, transmembrane protein [Yersinia
pestis Z176003]
gi|108775814|gb|ABG18333.1| lipoprotein releasing system, transmembrane protein [Yersinia
pestis Nepal516]
gi|108779805|gb|ABG13863.1| lipoprotein releasing system, transmembrane protein [Yersinia
pestis Antiqua]
gi|145210799|gb|ABP40206.1| lipoprotein releasing system, transmembrane protein [Yersinia
pestis Pestoides F]
gi|162352572|gb|ABX86520.1| lipoprotein releasing system, transmembrane protein LolE [Yersinia
pestis Angola]
gi|165913588|gb|EDR32208.1| lipoprotein releasing system, transmembrane protein LolE [Yersinia
pestis biovar Orientalis str. IP275]
gi|165922649|gb|EDR39800.1| lipoprotein releasing system, transmembrane protein LolE [Yersinia
pestis biovar Orientalis str. F1991016]
gi|165992928|gb|EDR45229.1| lipoprotein releasing system, transmembrane protein LolE [Yersinia
pestis biovar Antiqua str. E1979001]
gi|166208110|gb|EDR52590.1| lipoprotein releasing system, transmembrane protein LolE [Yersinia
pestis biovar Antiqua str. B42003004]
gi|166960322|gb|EDR56343.1| lipoprotein releasing system, transmembrane protein LolE [Yersinia
pestis biovar Orientalis str. MG05-1020]
gi|167048824|gb|EDR60232.1| lipoprotein releasing system, transmembrane protein LolE [Yersinia
pestis biovar Antiqua str. UG05-0454]
gi|167054686|gb|EDR64490.1| lipoprotein releasing system, transmembrane protein LolE [Yersinia
pestis biovar Mediaevalis str. K1973002]
gi|229680533|gb|EEO76630.1| outer membrane-specific lipoprotein transporter subunit; membrane
component of ABC superfamily [Yersinia pestis Nepal516]
gi|229689339|gb|EEO81402.1| outer membrane-specific lipoprotein transporter subunit; membrane
component of ABC superfamily [Yersinia pestis biovar
Orientalis str. India 195]
gi|229694077|gb|EEO84125.1| outer membrane-specific lipoprotein transporter subunit; membrane
component of ABC superfamily [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229703493|gb|EEO90510.1| outer membrane-specific lipoprotein transporter subunit; membrane
component of ABC superfamily [Yersinia pestis Pestoides
A]
gi|262362291|gb|ACY59012.1| lipoprotein releasing system, transmembrane protein [Yersinia
pestis D106004]
gi|262366226|gb|ACY62783.1| lipoprotein releasing system, transmembrane protein [Yersinia
pestis D182038]
gi|270338838|gb|EFA49615.1| lipoprotein releasing system, transmembrane protein LolE [Yersinia
pestis KIM D27]
gi|294354633|gb|ADE64974.1| lipoprotein releasing system, transmembrane protein [Yersinia
pestis Z176003]
gi|320014769|gb|ADV98340.1| outer membrane-specific lipoprotein transporter subunit; membrane
component of ABC superfamily [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 415
Score = 119 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 55/265 (20%), Positives = 112/265 (42%), Gaps = 1/265 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
S +++ R+ R+ +S+ S IS +G+ +GV LIV +S MNGF ++ R+L +
Sbjct: 4 SPLSLLIGLRFSRGRRRGGMVSLISVISTLGIALGVAVLIVGLSAMNGFERELKNRILAV 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H I P + R++ +P ++ P+++ + + + + +
Sbjct: 64 VPHGEIAVVNQPFSGWPQTLQRIEKVPGIVAAAPYINFTGLIENSTQLRAVQVKGVDPEA 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ S+ + +I+GK LA LG+ GD + ++ P D +
Sbjct: 124 EQHLSALPSFVLDNAWSHFKAGQQQIILGKGLADTLGVKQGDWLTVMIPNSDPEMKLLQP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ V G+F+ D+ + + L +AQ Y ++ ++V+GI + V D + N
Sbjct: 184 KRIRLQVAGIFQ-LSGQLDHSLALVPLIDAQQYLDMGDSVTGIAIKVNDVYNANQLVRNA 242
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ V + W Y + +
Sbjct: 243 GEVSNAYVYISSWIGTYGYMYRDIQ 267
>gi|220903888|ref|YP_002479200.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Desulfovibrio desulfuricans subsp. desulfuricans str.
ATCC 27774]
gi|219868187|gb|ACL48522.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Desulfovibrio desulfuricans subsp. desulfuricans str.
ATCC 27774]
Length = 411
Score = 119 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 75/268 (27%), Positives = 127/268 (47%), Gaps = 3/268 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
FE+ VA RYLFS RK FI I S +S +GV +GV AL+VV+ V NG DM ++LG
Sbjct: 4 MSFELFVALRYLFSRRKQTFIYIISLMSILGVALGVGALVVVLGVYNGMTTDMRDKILGA 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N H ++ + + + ++G GV++RGI
Sbjct: 64 NSHAIVMSYLPSAFENDDGLLERIRSIKGVTGATPFVYTEVMLSTANGVKGVVLRGIDPE 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRG--KGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + + D + G+IIG++LA+ LG+++G ++N+LSP G T G
Sbjct: 124 SGPRVLSMLRQMRSGSAADLQKEGAPGLIIGEELAKRLGLAVGSRVNLLSPSGQKTASGY 183
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAV-SGIEVFVKDPDAIEKTH 241
R + + V+G+F+ +YD+ + ++ L A+ L SG+E+ V D ++
Sbjct: 184 APRIRPFEVVGVFKTGMFEYDSSLAFVHLSAARDVLGLPEKYLSGVELTVNDLFKADQIS 243
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ LG+ V W + F+ +
Sbjct: 244 SRVATELGSPFYVRSWMEMNANLFAALK 271
>gi|161503688|ref|YP_001570800.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. arizonae serovar
62:z4,z23:-- str. RSK2980]
gi|160865035|gb|ABX21658.1| hypothetical protein SARI_01772 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 414
Score = 119 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 55/267 (20%), Positives = 113/267 (42%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ S +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L
Sbjct: 1 MASPLSLLIGLRFSRGRRRGGIVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ P +++ ++ +P + P+++ V ++ + +
Sbjct: 61 AVVPHGEIEAVNQPWTNWREALEKVRKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + VIIGK +A L + GD ++I+ P + +
Sbjct: 121 KQEQQLSALPSFVQNHAWDHFKAGEQQVIIGKGVADALKVKQGDWVSIMIPNANADHKLL 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ V G+ + D+ + L++AQ Y ++ ++VSGI + V D K
Sbjct: 181 QPKRVRLHVTGILQ-LSGQLDHSFAMIPLEDAQQYLDMGSSVSGIALKVHDVFNANKLVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|87118941|ref|ZP_01074839.1| hypothetical protein MED121_11765 [Marinomonas sp. MED121]
gi|86165332|gb|EAQ66599.1| hypothetical protein MED121_11765 [Marinomonas sp. MED121]
Length = 414
Score = 119 bits (296), Expect = 6e-25, Method: Composition-based stats.
Identities = 66/268 (24%), Positives = 121/268 (45%), Gaps = 3/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + V + RY + R N FIS SF S G+ +GV LI+V+SVMNGF ++ +R+L
Sbjct: 1 MLNFLPVRIGLRYARAKRNNHFISFISFSSIAGLALGVAVLIIVLSVMNGFDRELRQRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H + L+++Q A + +P V+ V P Q +L
Sbjct: 61 GMVPHATL-WGSPNLLNWQADAELIATMPGVLGVAPHTQAQVMFQSKKGVQGALLNGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G++ + G+I+G+ LA+ L +++GDK+ + P V+ G+
Sbjct: 120 ELEAKVSIIDEHMVKGSLEALNQQSFGIILGEQLAKILRVNVGDKVTAILPEASVSIAGI 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
R K +T++G+F++ + D+ + Y+ + +A L V + + D
Sbjct: 180 TPRLKRFTLVGVFKVG-AELDSSLAYIHINDAAKLKRLPKGQVEAVRISFDDLFKAPNMI 238
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+I R + V DW + + F +
Sbjct: 239 WDIARKVPGQNRVSDWTKTHGNLFQAIQ 266
>gi|317491832|ref|ZP_07950267.1| lipoprotein releasing protein [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316920266|gb|EFV41590.1| lipoprotein releasing protein [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 416
Score = 119 bits (296), Expect = 6e-25, Method: Composition-based stats.
Identities = 58/265 (21%), Positives = 111/265 (41%), Gaps = 1/265 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
S +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L +
Sbjct: 4 SPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELDHRILSV 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H I P + + R++ + ++ P+V + + + L
Sbjct: 64 VPHGEIFPVEQPFTGWPQVLERVEKVKGIVAAAPYVEFTGLIESGTQLVAVQLRGVNPEQ 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ S S + VI+GK +A L + +GD + ++ P D +
Sbjct: 124 ESRVSSLSQYVQDNAWSKFKAGEQQVILGKGVADALHVKVGDWVTVMVPNNDPQMKLLQP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ V G+ + D+ + + L +AQ Y +L ++V+GI + V D +K +
Sbjct: 184 KRIRLHVSGILQ-LSGMLDHSLAMVPLADAQQYQDLGDSVTGISIKVNDVFNADKLVRDA 242
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ V + W+ Y F +
Sbjct: 243 GEVTNAYVYLRSWKGTYGYMFRDIQ 267
>gi|225874329|ref|YP_002755788.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Acidobacterium capsulatum ATCC 51196]
gi|225793502|gb|ACO33592.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Acidobacterium capsulatum ATCC 51196]
Length = 410
Score = 119 bits (296), Expect = 6e-25, Method: Composition-based stats.
Identities = 64/270 (23%), Positives = 119/270 (44%), Gaps = 5/270 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
RFE+ +A RYL + R+ A + + + IS +GV +GV +LI+ +S+ G R D+ +L
Sbjct: 1 MRFELFIAARYLRAKRRQAVVGVITAISVVGVAVGVASLIIALSITTGMRRDLQGSLLSS 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
V + + + + + G+G +++GI
Sbjct: 61 TADVDLTRTMSDGIQNWEPLLARLRELPHVTAAAPGLYDPVLISHGVRGTGAMLKGIVPK 120
Query: 125 DFSYLQNSFSRFYGN-----VSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
D + N S F + +++G DLA +G S+GD + + SP GD+TP
Sbjct: 121 DERTVSNLLSDFTHGSGVALSDPESSATPPIVLGSDLADTIGASVGDTVLVTSPQGDLTP 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
G+ R + + V G+F F YD+ ++ L++AQ F + +S I + +
Sbjct: 181 YGLVPRYQRFQVAGIFHSGFYQYDSSFGFIRLKDAQALFGEPDVISIISFKIDNLYQAPA 240
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I + G G +W ++ + F+ +
Sbjct: 241 IGQQIEKAAGKGFSTTNWMEQNRQLFAALQ 270
>gi|213420044|ref|ZP_03353110.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Typhi str.
E01-6750]
Length = 331
Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats.
Identities = 52/267 (19%), Positives = 110/267 (41%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ S +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L
Sbjct: 1 MASPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ P +++ ++ +P + P+++ V ++ + +
Sbjct: 61 AVVPHGEIEAVNQPWTNWREALAKVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + +IIGK +A L + GD ++I+ P + +
Sbjct: 121 KQEQQLSALPSFVQNHAWDHFKAGEQQIIIGKGVADALNVKQGDWVSIMIPNANADHKLL 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + L++AQ Y ++ ++VSGI + V D K
Sbjct: 181 QPKRVRLH-VIGILQLSGQLDHSFAMIPLEDAQQYLDMGSSVSGIALKVHDVFNANKLVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|213609327|ref|ZP_03369153.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Typhi str.
E98-2068]
Length = 361
Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats.
Identities = 52/267 (19%), Positives = 110/267 (41%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ S +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L
Sbjct: 1 MASPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ P +++ ++ +P + P+++ V ++ + +
Sbjct: 61 AVVPHGEIEAVNQPWTNWREALAKVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + +IIGK +A L + GD ++I+ P + +
Sbjct: 121 KQEQQLSALPSFVQNHAWDHFKAGEQQIIIGKGVADALNVKQGDWVSIMIPNANADHKLL 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + L++AQ Y ++ ++VSGI + V D K
Sbjct: 181 QPKRVRLH-VIGILQLSGQLDHSFAMIPLEDAQQYLDMGSSVSGIALKVHDVFNANKLVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|51596762|ref|YP_070953.1| outer membrane-specific lipoprotein transporter subunit LolE
[Yersinia pseudotuberculosis IP 32953]
gi|186895830|ref|YP_001872942.1| outer membrane-specific lipoprotein transporter subunit LolE
[Yersinia pseudotuberculosis PB1/+]
gi|51590044|emb|CAH21678.1| ABC tranporter/lipoprotein releasing system, permease subunit lolE
[Yersinia pseudotuberculosis IP 32953]
gi|186698856|gb|ACC89485.1| lipoprotein releasing system, transmembrane protein LolE [Yersinia
pseudotuberculosis PB1/+]
Length = 415
Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats.
Identities = 54/265 (20%), Positives = 112/265 (42%), Gaps = 1/265 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
S +++ R+ R+ +S+ S IS +G+ +GV LIV +S MNGF ++ R+L +
Sbjct: 4 SPLSLLIGLRFSRGRRRGGMVSLISVISTLGIALGVAVLIVGLSAMNGFERELKNRILAV 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H I P + R++ +P ++ P+++ + + + + +
Sbjct: 64 VPHGEIAVVNQPFSGWPQTLQRIEKVPGIVAAAPYINFTGLIENSTQLRAVQVKGVDPEA 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ S+ + +I+GK LA LG+ G+ + ++ P D +
Sbjct: 124 EQHLSALPSFVLDNAWSHFKAGQQQIILGKGLADTLGVKQGNWLTVMIPNSDPEMKLLQP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ V G+F+ D+ + + L +AQ Y ++ ++V+GI + V D + N
Sbjct: 184 KRIRLQVAGIFQ-LSGQLDHSLALVPLIDAQQYLDMGDSVTGIAIKVNDVYNANQLVRNA 242
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ V + W Y + +
Sbjct: 243 GEVSNAYVYISSWIGTYGYMYRDIQ 267
>gi|89055807|ref|YP_511258.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Jannaschia sp. CCS1]
gi|88865356|gb|ABD56233.1| Lipoprotein releasing system transmembrane protein LolC/E family
[Jannaschia sp. CCS1]
Length = 461
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 76/289 (26%), Positives = 126/289 (43%), Gaps = 26/289 (8%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
RFE ++AWRYL + R +S ++ISFIG+ + VMALI V++V GFR + + +LG N
Sbjct: 26 RFEFLIAWRYLRARRTEGGVSAMTWISFIGIALAVMALIAVLAVRAGFRHEFVGTILGAN 85
Query: 66 GHVVIQQKYYPLVD---------YQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
HV + Y +A + + V + GQ S +
Sbjct: 86 PHVAVYDIAELNDAGQLERALEGYDAVAEAVRGVNGVTHAAAVIRGQVLSSYRGRNSAVE 145
Query: 117 LVRGISNSDFSYLQNSFSRFYGN----------------VSNDFDRGKGVIIGKDLARNL 160
++ + + + + G G+ IG +AR L
Sbjct: 146 VIGITPEDLSNVPLVAEPEWRQGLLSAFGAPTEITPEVDGAFPIPGGPGIAIGSGVAREL 205
Query: 161 GISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL 220
G S+GD+I ++SP G TP G R +Y V+ +F++ D D VY+ EAQ YFN
Sbjct: 206 GASVGDRIRLVSPDGARTPFGTSPRVSTYEVVYIFQVGRWDIDRTRVYIPFGEAQTYFNR 265
Query: 221 ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ ++V V +P+ I + +++ G V + W+ F + +
Sbjct: 266 DGVADEVQVTVAEPEQIAQYVLPLLQA-GGDVQIWTWEDSSGAFLTALQ 313
>gi|332162080|ref|YP_004298657.1| outer membrane-specific lipoprotein transporter subunit LolE
[Yersinia enterocolitica subsp. palearctica 105.5R(r)]
gi|318606128|emb|CBY27626.1| lipoprotein releasing system transmembrane protein LolE [Yersinia
enterocolitica subsp. palearctica Y11]
gi|325666310|gb|ADZ42954.1| outer membrane-specific lipoprotein transporter subunit LolE
[Yersinia enterocolitica subsp. palearctica 105.5R(r)]
Length = 419
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 55/265 (20%), Positives = 111/265 (41%), Gaps = 1/265 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
S +++ R+ R+ +S+ S IS +G+ +GV LIV +S MNGF ++ R+L +
Sbjct: 8 SPLSLLIGLRFSRGRRRGGMVSLISVISTLGIALGVAVLIVGLSAMNGFERELKNRILAV 67
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H I P + R++ +P ++ P+++ + + + + S +
Sbjct: 68 VPHGEIAVVNQPFSGWPQTLQRIEKVPGIVAAAPYINFTGLIENGTQLRAVQVKGVDSEA 127
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ N + +I+GK LA LG+ G + ++ P D +
Sbjct: 128 EQRLSALPSFVLDHAWDNFKAGQQQIILGKGLADALGVKQGSWLTVMIPNSDPEMKLLQP 187
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ V G+F+ D+ + + L +AQ Y ++ ++V+GI + V D K +
Sbjct: 188 KRIRLQVAGVFQ-LSGQLDHSLALVPLVDAQQYLDMGDSVTGIAIKVDDVYNANKLVRSA 246
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ V + W Y + +
Sbjct: 247 GEVSNAYVYISSWIGTYGYMYRDIQ 271
>gi|322513497|ref|ZP_08066607.1| lipoprotein-releasing ABC superfamily ATP binding cassette
transporter, permease protein [Actinobacillus ureae ATCC
25976]
gi|322120716|gb|EFX92600.1| lipoprotein-releasing ABC superfamily ATP binding cassette
transporter, permease protein [Actinobacillus ureae ATCC
25976]
Length = 416
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 52/265 (19%), Positives = 110/265 (41%), Gaps = 3/265 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY +KN +S+ S S +G+ +GV LI+ +S MNGF ++ +RVL + H
Sbjct: 4 PFFISWRYQRGKQKNRLVSLISLFSSVGIALGVAVLIIGLSAMNGFERELNQRVLSVVPH 63
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSG---VLVRGISNS 124
+ + +L+ + + VS +GL G+ VRG+
Sbjct: 64 AELYSYHGNENAPIQAGKKLENLAKSHPNVTAVSPFVSFTGLIENGTQLKIAQVRGVDPV 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + F + G+I+G +A++L ++ GD++ +L P
Sbjct: 124 KQDKVSSLSHYIPSEQWQAFHQQGGLILGAGIAKDLEVAAGDEVTLLLPQPTEDGKLAQP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
S V + ++ + + + +L N SGIE+ +K+P +++
Sbjct: 184 LRFSLPVTSVLKLEGQLDHSYALLPIEKAQELLEYQPNEYSGIELALKEPFKVQELQMPE 243
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + W +++ ++ +
Sbjct: 244 LANFNQPLYLNTWIEKFGYMYNDIQ 268
>gi|206577709|ref|YP_002239261.1| lipoprotein releasing system, transmembrane protein LolE
[Klebsiella pneumoniae 342]
gi|288936119|ref|YP_003440178.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Klebsiella variicola At-22]
gi|206566767|gb|ACI08543.1| lipoprotein releasing system, transmembrane protein LolE
[Klebsiella pneumoniae 342]
gi|288890828|gb|ADC59146.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Klebsiella variicola At-22]
Length = 414
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 57/267 (21%), Positives = 113/267 (42%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ S +++A R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ RVL
Sbjct: 1 MASPLSLLIALRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ P ++Q ++ + ++ P+++ V S+ + +
Sbjct: 61 AVVPHGEIEPVNQPWNNWQEALAKVQKVKGIVAAAPYINFTGLVESGSNMRAIQVKGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + VI+GK +A L + GD ++I+ P D +
Sbjct: 121 QQETRLSALPTFVQNNAWAGFKAGEQQVILGKGVADALHVKQGDWVSIMIPNADADHQLL 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ V G+ + D+ + +Q+AQ Y + ++V+GI + V D K
Sbjct: 181 QPKRVRLHVTGILQ-LSGQLDHSFAMIPMQDAQQYLEMGSSVTGIAIKVTDVFHANKLVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|239998980|ref|ZP_04718904.1| LolC [Neisseria gonorrhoeae 35/02]
gi|240016545|ref|ZP_04723085.1| LolC [Neisseria gonorrhoeae FA6140]
gi|240112966|ref|ZP_04727456.1| LolC [Neisseria gonorrhoeae MS11]
gi|240125752|ref|ZP_04738638.1| LolC [Neisseria gonorrhoeae SK-92-679]
gi|240128274|ref|ZP_04740935.1| LolC [Neisseria gonorrhoeae SK-93-1035]
Length = 394
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 60/246 (24%), Positives = 119/246 (48%), Gaps = 1/246 (0%)
Query: 25 ISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIA 84
+S + +S G+ +GV ALIVV+SVMNGF++++ ++L + H I D++ +
Sbjct: 1 MSFITMVSIAGIALGVTALIVVLSVMNGFQKEIRGQLLNVAPHAEIGYIDNTDTDWRNLL 60
Query: 85 NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDF 144
+ ++ P+VS QA ++ + + + + ++ G +
Sbjct: 61 RFAENRKGILAAAPYVSNQALLANAGEIRGVQIRGILPSEERKVVEYGDKMPAGKFEDLI 120
Query: 145 DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDN 204
+I+G LA LG +G K+ +++P G+VTP G+ R K +TV+G+ + + DN
Sbjct: 121 PGEFDIILGVGLAEALGAEVGGKVTVITPEGNVTPAGVVPRLKQFTVVGLVKTGVYEVDN 180
Query: 205 GMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV-RILGNGVVVIDWQQRYQI 263
+ +Q+A++ + L+ V+G+ + + DP ++ + V V DW +
Sbjct: 181 SLAMTHIQDARVLYRLDKEVAGLRLKLADPQNAPALTATLIPEAQRDTVWVRDWTYSNRS 240
Query: 264 FFSCYE 269
+F E
Sbjct: 241 YFEAVE 246
>gi|238791840|ref|ZP_04635477.1| Lipoprotein-releasing system transmembrane protein lolE [Yersinia
intermedia ATCC 29909]
gi|238728944|gb|EEQ20461.1| Lipoprotein-releasing system transmembrane protein lolE [Yersinia
intermedia ATCC 29909]
Length = 415
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 54/265 (20%), Positives = 109/265 (41%), Gaps = 1/265 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
S +++ R+ R+ +S+ S IS +G+ +GV LIV +S MNGF ++ R+L +
Sbjct: 4 SPLSLLIGLRFSRGRRRGGMVSLISVISTLGIALGVAVLIVGLSAMNGFERELKDRILAV 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H I P + R++ P ++ P+++ + + + + +
Sbjct: 64 VPHGEIAVVNQPFSGWPQTLQRIEKAPGIVAAAPYINFTGLIENATQLRAVQVKGVDPQA 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ N + +I+GK LA LG+ G + ++ P D +
Sbjct: 124 EQHLSALPSFVLDHAWDNFKAGQQQIILGKGLADALGVKQGSWLTVMIPNSDPEMKLLQP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ V G+F+ D+ + + L +AQ Y ++ ++V+GI + V D K +
Sbjct: 184 KRIRLQVAGVFQ-LSGQLDHSLALVPLADAQQYLDMGDSVTGIAIKVNDVYNANKLVRSA 242
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ V + W Y + +
Sbjct: 243 GEVSNAYVYISSWIGTYGYMYRDIQ 267
>gi|294671332|ref|ZP_06736183.1| hypothetical protein NEIELOOT_03041 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291306964|gb|EFE48207.1| hypothetical protein NEIELOOT_03041 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 415
Score = 118 bits (294), Expect = 9e-25, Method: Composition-based stats.
Identities = 64/268 (23%), Positives = 124/268 (46%), Gaps = 2/268 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
E + RYL + +++ F+S IS IG+ IGVMALIVV+SV+NGF++D+ ++
Sbjct: 1 MISLETWIGLRYLRAKKRSGFMSFIGIISIIGIAIGVMALIVVLSVVNGFQKDVRSQLFS 60
Query: 64 INGH-VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H + +Q + + DV+ P+++ QA ++ +
Sbjct: 61 VAPHAEIGFYDTENGGSWQDLRKMVAGNKDVLGSAPYIADQALLANNGVVRGVQVRGIDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G + +I+G++LA LG +G K+ +++P G+VTP G+
Sbjct: 121 QEEKQVVDYWQKMTTGKFEDLKPGEFDIILGQELANELGAEVGGKVTVITPEGNVTPAGV 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K + V+G+ + + DN + +++A+ + E +G+ + + DP
Sbjct: 181 VPRLKQFNVVGVVKTGLYELDNTLTLTHIEDARTLYRFEGGFAGLRLKLADPQNAPAVVP 240
Query: 243 NIV-RILGNGVVVIDWQQRYQIFFSCYE 269
++ + V DW Q +F+ E
Sbjct: 241 KLLPADAADRVWARDWTFSNQSYFNAVE 268
>gi|240080669|ref|ZP_04725212.1| LolC [Neisseria gonorrhoeae FA19]
gi|240118016|ref|ZP_04732078.1| LolC [Neisseria gonorrhoeae PID1]
gi|240123570|ref|ZP_04736526.1| LolC [Neisseria gonorrhoeae PID332]
Length = 394
Score = 118 bits (294), Expect = 9e-25, Method: Composition-based stats.
Identities = 60/246 (24%), Positives = 119/246 (48%), Gaps = 1/246 (0%)
Query: 25 ISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIA 84
+S + +S G+ +GV ALIVV+SVMNGF++++ ++L + H I D++ +
Sbjct: 1 MSFITMVSIAGIALGVTALIVVLSVMNGFQKEIRGQLLNVAPHAEIGYIDNTDTDWRNLL 60
Query: 85 NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDF 144
+ ++ P+VS QA ++ + + + + ++ G +
Sbjct: 61 RFAENRKGILAAAPYVSNQALLANAGEIRGVQIRGILPSEERKVVEYGDKMPAGKFEDLI 120
Query: 145 DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDN 204
+I+G LA LG +G K+ +++P G+VTP G+ R K +TV+G+ + + DN
Sbjct: 121 PGEFDIILGVGLAEALGAEVGGKVTVITPEGNVTPAGIVPRLKQFTVVGLVKTGVYEVDN 180
Query: 205 GMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV-RILGNGVVVIDWQQRYQI 263
+ +Q+A++ + L+ V+G+ + + DP ++ + V V DW +
Sbjct: 181 SLAMTHIQDARVLYRLDKEVAGLRLKLADPQNAPALTATLIPEAQRDTVWVRDWTYSNRS 240
Query: 264 FFSCYE 269
+F E
Sbjct: 241 YFEAVE 246
>gi|330861570|emb|CBX71769.1| lipoprotein-releasing system transmembrane protein lolE [Yersinia
enterocolitica W22703]
Length = 394
Score = 118 bits (294), Expect = 9e-25, Method: Composition-based stats.
Identities = 55/265 (20%), Positives = 111/265 (41%), Gaps = 1/265 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
S +++ R+ R+ +S+ S IS +G+ +GV LIV +S MNGF ++ R+L +
Sbjct: 8 SPLSLLIGLRFSRGRRRGGMVSLISVISTLGIALGVAVLIVGLSAMNGFERELKNRILAV 67
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H I P + R++ +P ++ P+++ + + + + S +
Sbjct: 68 VPHGEIAVVNQPFSGWPQTLQRIEKVPGIVAAAPYINFTGLIENGTQLRAVQVKGVDSEA 127
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ N + +I+GK LA LG+ G + ++ P D +
Sbjct: 128 EQRLSALPSFVLDHAWDNFKAGQQQIILGKGLADALGVKQGSWLTVMIPNSDPEMKLLQP 187
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ V G+F+ D+ + + L +AQ Y ++ ++V+GI + V D K +
Sbjct: 188 KRIRLQVAGVFQ-LSGQLDHSLALVPLVDAQQYLDMGDSVTGIAIKVDDVYNANKLVRSA 246
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ V + W Y + +
Sbjct: 247 GEVSNAYVYISSWIGTYGYMYRDIQ 271
>gi|227326998|ref|ZP_03831022.1| outer membrane-specific lipoprotein transporter subunit LolC
[Pectobacterium carotovorum subsp. carotovorum WPP14]
Length = 400
Score = 118 bits (294), Expect = 9e-25, Method: Composition-based stats.
Identities = 56/267 (20%), Positives = 104/267 (38%), Gaps = 7/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRASDRFGRFVSWLSAIGITLGVMALVTVLSVMNGFERELEGNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ +I L A+ LD + V +V P L S S + +
Sbjct: 61 GVMPQALISTPQGSLNPALIPASSLDSLEGVTRVAP---LTTGDVVLQSARSVAVGVMLG 117
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S I+G LA LG++ GD + ++
Sbjct: 118 IDPDEQEPLSRYLVNVKQQQLQSGQYQAILGDKLAAQLGVNAGDHVRMMVTSASQLTPMG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + D+ + ++ Q+A N ++G ++++ P +++
Sbjct: 178 RIPSQRIFTVAGTFAANSEVDSYQLLVNQQDASRLMRYPANHITGWRLWLEKPLSVDTLS 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G V DW++R F
Sbjct: 238 ---TQTLPEGTVWKDWRERKGELFQAV 261
>gi|204930762|ref|ZP_03221635.1| lipoprotein releasing system, transmembrane protein LolE
[Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|204320221|gb|EDZ05425.1| lipoprotein releasing system, transmembrane protein LolE
[Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
Length = 414
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 52/267 (19%), Positives = 110/267 (41%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ S +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L
Sbjct: 1 MASPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ P +++ ++ +P + P+++ V ++ + +
Sbjct: 61 AVVPHGEIEAVNQPWTNWREALAKVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + +IIGK +A L + GD ++I+ P + +
Sbjct: 121 KQEQQLSALPSFVQNHAWDHFKAGEQQIIIGKGVADALNVKQGDWVSIMIPNANADHKLL 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + L++AQ Y ++ ++VSGI + V D K
Sbjct: 181 QPKRVRLH-VIGILQLSGQLDHSFAMIPLEDAQQYLDMGSSVSGIALKVHDVFNANKLVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|240014110|ref|ZP_04721023.1| LolC [Neisseria gonorrhoeae DGI18]
gi|240115720|ref|ZP_04729782.1| LolC [Neisseria gonorrhoeae PID18]
gi|240121672|ref|ZP_04734634.1| LolC [Neisseria gonorrhoeae PID24-1]
Length = 394
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 60/246 (24%), Positives = 119/246 (48%), Gaps = 1/246 (0%)
Query: 25 ISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIA 84
+S + +S G+ +GV ALIVV+SVMNGF++++ ++L + H I D++ +
Sbjct: 1 MSFITMVSIAGIALGVTALIVVLSVMNGFQKEIRGQLLNVAPHAEIGYIDNTDTDWRNLL 60
Query: 85 NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDF 144
+ ++ P+VS QA ++ + + + + ++ G +
Sbjct: 61 RFAENRKGILAAAPYVSNQALLANAGEIRGVQIRGILPSEERKVVEYGDKMPAGKFEDLI 120
Query: 145 DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDN 204
+I+G LA LG +G K+ +++P G+VTP G+ R K +TV+G+ + + DN
Sbjct: 121 PGEFDIILGIGLAEALGAEVGGKVTVITPEGNVTPAGIVPRLKQFTVVGLVKTGVYEVDN 180
Query: 205 GMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV-RILGNGVVVIDWQQRYQI 263
+ +Q+A++ + L+ V+G+ + + DP ++ + V V DW +
Sbjct: 181 SLAMTHIQDARVLYRLDKEVAGLRLKLADPQNAPALTATLIPEAQRDTVWVRDWTYSNRS 240
Query: 264 FFSCYE 269
+F E
Sbjct: 241 YFEAVE 246
>gi|238920220|ref|YP_002933735.1| outer membrane-specific lipoprotein transporter subunit LolE
[Edwardsiella ictaluri 93-146]
gi|238869789|gb|ACR69500.1| lipoprotein releasing system, transmembrane protein LolE, putative
[Edwardsiella ictaluri 93-146]
Length = 415
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 61/267 (22%), Positives = 110/267 (41%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +A R+ R+ +S+ S IS +G+ +GV LIV +S MNGF ++ +R+L
Sbjct: 1 MDLALALHIARRFSRGRRRGGMVSLISVISTVGIALGVAVLIVGLSAMNGFERELDQRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I P D+Q + R+D + DV+ P+V+ + S V VRG+
Sbjct: 61 SVVPHGEIYPVEQPFTDWQSVLARVDRVKDVVGAAPYVNFTGLMEHG-SQLRAVQVRGVD 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S + + N DF G +I + + M +
Sbjct: 120 PAQESRVSSLPRYVLDNAWVDFHAGGQQVILGKGVADALGVRRGDWVTVMVPNSDPQMKL 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ +G D+ + + L +AQ Y +L ++V+GI + V DP +K
Sbjct: 180 LQPKRIRLQVGGILQLSGMLDHTLALVPLADAQQYQDLGDSVTGIAIRVADPFQADKVVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + V + W+ Y F +
Sbjct: 240 AAGEVTNDYVYIRSWKGTYGYMFRDIQ 266
>gi|170023950|ref|YP_001720455.1| outer membrane-specific lipoprotein transporter subunit LolE
[Yersinia pseudotuberculosis YPIII]
gi|169750484|gb|ACA68002.1| lipoprotein releasing system, transmembrane protein LolE [Yersinia
pseudotuberculosis YPIII]
Length = 415
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 55/265 (20%), Positives = 112/265 (42%), Gaps = 1/265 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
S +++ R+ R+ +S+ S IS +G+ +GV LIV +S MNGF ++ R+L +
Sbjct: 4 SPLSLLIGLRFSRGRRRGGMVSLISVISTLGIALGVAVLIVGLSAMNGFERELKNRILAV 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H I P + R++ +P ++ P+++ + + + + +
Sbjct: 64 VPHGEIAVVNQPFSGWPQTLQRIEKVPGIVAAAPYINFTGLIENSTQLRAVQVKGVDPEA 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ S+ + +I+GK LA LG+ GD + ++ P D +
Sbjct: 124 EQHLSALPSFVLDNAWSHFKAGQQQIILGKGLADTLGVKQGDWLTVMIPNSDPEMKLLQP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ V G+F+ D+ + + L +AQ Y ++ ++V+GI + V D + N
Sbjct: 184 KRIRLQVAGIFQ-LSGQLDHSLALVPLIDAQQYLDMGDSVTGIAIKVNDVYNANQLVRNA 242
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ V + W Y + +
Sbjct: 243 GEVSNAYVYINSWIGTYGYMYRDIQ 267
>gi|56413795|ref|YP_150870.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Paratyphi A
str. ATCC 9150]
gi|197362718|ref|YP_002142355.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Paratyphi A
str. AKU_12601]
gi|56128052|gb|AAV77558.1| ABC transporter integral membrane subunit [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|197094195|emb|CAR59699.1| ABC transporter integral membrane subunit [Salmonella enterica
subsp. enterica serovar Paratyphi A str. AKU_12601]
Length = 414
Score = 118 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 52/267 (19%), Positives = 109/267 (40%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ S +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L
Sbjct: 1 MASPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ P +++ ++ +P + P+++ V ++ + +
Sbjct: 61 AVVPHGEIEAVNQPWTNWREALAKVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + +IIGK +A L + GD ++I+ P + +
Sbjct: 121 KQEQQLSALPSFVQNHAWDHFKAGEQQIIIGKGVADALNVKQGDWVSIMIPNANADHKLL 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + L++AQ Y ++ + VSGI + V D K
Sbjct: 181 QPKRVRLH-VIGILQLSGQLDHSFAMIPLEDAQQYLDMGSRVSGIALKVHDVFNANKLVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|16760094|ref|NP_455711.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Typhi str.
CT18]
gi|29142135|ref|NP_805477.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Typhi str.
Ty2]
gi|168264270|ref|ZP_02686243.1| lipoprotein releasing system, transmembrane protein LolE
[Salmonella enterica subsp. enterica serovar Hadar str.
RI_05P066]
gi|168467179|ref|ZP_02701021.1| lipoprotein releasing system, transmembrane protein LolE
[Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|198244849|ref|YP_002215918.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|200389566|ref|ZP_03216177.1| lipoprotein releasing system, transmembrane protein LolE
[Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|207857274|ref|YP_002243925.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Enteritidis
str. P125109]
gi|213051992|ref|ZP_03344870.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Typhi str.
E00-7866]
gi|213425042|ref|ZP_03357792.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Typhi str.
E02-1180]
gi|213584501|ref|ZP_03366327.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Typhi str.
E98-0664]
gi|213649274|ref|ZP_03379327.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Typhi str.
J185]
gi|213864855|ref|ZP_03386974.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Typhi str.
M223]
gi|289828361|ref|ZP_06546274.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Typhi str.
E98-3139]
gi|25321155|pir||AD0645 ABC transporter integral membrane chain STY1259 [imported] -
Salmonella enterica subsp. enterica serovar Typhi
(strain CT18)
gi|16502388|emb|CAD08343.1| ABC transporter integral membrane subunit [Salmonella enterica
subsp. enterica serovar Typhi]
gi|29137764|gb|AAO69326.1| ABC transporter integral membrane subunit [Salmonella enterica
subsp. enterica serovar Typhi str. Ty2]
gi|195630344|gb|EDX48970.1| lipoprotein releasing system, transmembrane protein LolE
[Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|197939365|gb|ACH76698.1| lipoprotein releasing system, transmembrane protein LolE
[Salmonella enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|199602011|gb|EDZ00557.1| lipoprotein releasing system, transmembrane protein LolE
[Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|205347301|gb|EDZ33932.1| lipoprotein releasing system, transmembrane protein LolE
[Salmonella enterica subsp. enterica serovar Hadar str.
RI_05P066]
gi|206709077|emb|CAR33410.1| ABC transporter integral membrane subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. P125109]
gi|326623666|gb|EGE30011.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Dublin str.
3246]
Length = 414
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 52/267 (19%), Positives = 110/267 (41%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ S +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L
Sbjct: 1 MASPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ P +++ ++ +P + P+++ V ++ + +
Sbjct: 61 AVVPHGEIEAVNQPWTNWREALAKVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + +IIGK +A L + GD ++I+ P + +
Sbjct: 121 KQEQQLSALPSFVQNHAWDHFKAGEQQIIIGKGVADALNVKQGDWVSIMIPNANADHKLL 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + L++AQ Y ++ ++VSGI + V D K
Sbjct: 181 QPKRVRLH-VIGILQLSGQLDHSFAMIPLEDAQQYLDMGSSVSGIALKVHDVFNANKLVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|205353047|ref|YP_002226848.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Gallinarum
str. 287/91]
gi|205272828|emb|CAR37754.1| ABC transporter integral membrane subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. 287/91]
gi|326628126|gb|EGE34469.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Gallinarum
str. 9]
Length = 414
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 111/267 (41%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ S +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L
Sbjct: 1 MASPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ P +++ ++ +P + P+++ V ++ + +
Sbjct: 61 AVVPHGEIEAVNQPWTNWREALAKVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + +IIGK +A L + GD ++I+ P + +
Sbjct: 121 KQEQQLSALPSFVQNHAWDHFKAGEQQIIIGKGVADALNVKQGDWVSIMIPNANADHKLL 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ V + L++AQ Y ++ ++VSGI + V D K
Sbjct: 181 QPKRVRLH-VIGILQLSGQLDHSFVMIPLEDAQQYLDMGSSVSGIALKVHDVFNANKLVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|16764574|ref|NP_460189.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Typhimurium
str. LT2]
gi|62179739|ref|YP_216156.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|161614550|ref|YP_001588515.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Paratyphi B
str. SPB7]
gi|167991995|ref|ZP_02573094.1| lipoprotein releasing system, transmembrane protein LolE
[Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168233099|ref|ZP_02658157.1| lipoprotein releasing system, transmembrane protein LolE
[Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|168239125|ref|ZP_02664183.1| lipoprotein releasing system, transmembrane protein LolE
[Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|168244291|ref|ZP_02669223.1| lipoprotein releasing system, transmembrane protein LolE
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL486]
gi|168822324|ref|ZP_02834324.1| lipoprotein releasing system, transmembrane protein LolE
[Salmonella enterica subsp. enterica serovar Weltevreden
str. HI_N05-537]
gi|194445190|ref|YP_002040474.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194448241|ref|YP_002045219.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL476]
gi|194469530|ref|ZP_03075514.1| lipoprotein releasing system, transmembrane protein LolE
[Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|194734795|ref|YP_002114225.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197250638|ref|YP_002146822.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Agona str.
SL483]
gi|197264136|ref|ZP_03164210.1| lipoprotein releasing system, transmembrane protein LolE
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|224584274|ref|YP_002638072.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Paratyphi C
strain RKS4594]
gi|238910961|ref|ZP_04654798.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Tennessee
str. CDC07-0191]
gi|16419737|gb|AAL20148.1| integral membrane protein ABC transporter [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|62127372|gb|AAX65075.1| ABC transporter, integral membrane protein [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|161363914|gb|ABX67682.1| hypothetical protein SPAB_02299 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194403853|gb|ACF64075.1| lipoprotein releasing system, transmembrane protein LolE
[Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194406545|gb|ACF66764.1| lipoprotein releasing system, transmembrane protein LolE
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL476]
gi|194455894|gb|EDX44733.1| lipoprotein releasing system, transmembrane protein LolE
[Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|194710297|gb|ACF89518.1| lipoprotein releasing system, transmembrane protein LolE
[Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197214341|gb|ACH51738.1| lipoprotein releasing system, transmembrane protein LolE
[Salmonella enterica subsp. enterica serovar Agona str.
SL483]
gi|197242391|gb|EDY25011.1| lipoprotein releasing system, transmembrane protein LolE
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|197288121|gb|EDY27508.1| lipoprotein releasing system, transmembrane protein LolE
[Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|205329781|gb|EDZ16545.1| lipoprotein releasing system, transmembrane protein LolE
[Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205332665|gb|EDZ19429.1| lipoprotein releasing system, transmembrane protein LolE
[Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|205336809|gb|EDZ23573.1| lipoprotein releasing system, transmembrane protein LolE
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL486]
gi|205341222|gb|EDZ27986.1| lipoprotein releasing system, transmembrane protein LolE
[Salmonella enterica subsp. enterica serovar Weltevreden
str. HI_N05-537]
gi|224468801|gb|ACN46631.1| ABC transporter integral membrane subunit [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
gi|261246431|emb|CBG24240.1| ABC transporter integral membrane subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. D23580]
gi|267992996|gb|ACY87881.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Typhimurium
str. 14028S]
gi|301157760|emb|CBW17252.1| ABC transporter integral membrane subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. SL1344]
gi|312912207|dbj|BAJ36181.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Typhimurium
str. T000240]
gi|320086341|emb|CBY96114.1| Macrolide export ATP-binding/permease protein macB [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
gi|321223835|gb|EFX48898.1| Lipoprotein releasing system transmembrane protein LolE [Salmonella
enterica subsp. enterica serovar Typhimurium str.
TN061786]
gi|322714209|gb|EFZ05780.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. A50]
gi|323129488|gb|ADX16918.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Typhimurium
str. 4/74]
Length = 414
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 52/267 (19%), Positives = 110/267 (41%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ S +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L
Sbjct: 1 MASPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ P +++ ++ +P + P+++ V ++ + +
Sbjct: 61 AVVPHGEIEAVNQPWTNWREALAKVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + +IIGK +A L + GD ++I+ P + +
Sbjct: 121 KQEQQLSALPSFVQNHAWDHFKAGEQQIIIGKGVADALNVKQGDWVSIMIPNANADHKLL 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + L++AQ Y ++ ++VSGI + V D K
Sbjct: 181 QPKRVRLH-VIGILQLSGQLDHSFAMIPLEDAQQYLDMGSSVSGIALKVHDVFNANKLVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|223936218|ref|ZP_03628131.1| protein of unknown function DUF214 [bacterium Ellin514]
gi|223895080|gb|EEF61528.1| protein of unknown function DUF214 [bacterium Ellin514]
Length = 428
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 64/269 (23%), Positives = 109/269 (40%), Gaps = 17/269 (6%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
FE+++A RYL R F+SI + IS +GV +GV L++V+SVM+GF + +++LG N
Sbjct: 5 PFELLLALRYLRPKR--TFVSIITLISVLGVTLGVAVLVIVISVMSGFDSQLREKILGFN 62
Query: 66 GHVVIQQK----------YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSG 115
H+ + + + V + + + + VL V Q
Sbjct: 63 SHLKVFEIDPKTKQEGVLHDFAVVSNMVKSNQNVVSVSPFVLNRVYIQTEPPRGEPRIDV 122
Query: 116 VLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKI-----NI 170
VRG+ S + + + RG V L + + +
Sbjct: 123 PYVRGVDPSSKEAVSLIATNIKQGTFDISGRGMLVGTDFANMMGLQVGDPVSVLLPRDLM 182
Query: 171 LSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVF 230
I K Y + G+F + +Y+ +V SL+ AQ ++L V G+ V
Sbjct: 183 KMKESMDRGEKELILPKDYEITGIFDTGYYEYNFSVVVTSLENAQDMYDLGEDVHGLMVM 242
Query: 231 VKDPDAIEKTHENIVRILGNGVVVIDWQQ 259
+KDP +K + + LG+ V W Q
Sbjct: 243 IKDPTQSDKVRAQLQKSLGSNYKVTSWVQ 271
>gi|269139409|ref|YP_003296110.1| lipoprotein releasing system, transmembrane protein [Edwardsiella
tarda EIB202]
gi|267985070|gb|ACY84899.1| lipoprotein releasing system, transmembrane protein [Edwardsiella
tarda EIB202]
gi|304559305|gb|ADM41969.1| Lipoprotein releasing system transmembrane protein LolE
[Edwardsiella tarda FL6-60]
Length = 415
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 61/267 (22%), Positives = 111/267 (41%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +A R+ R+ +S+ S IS +G+ +GV LIV +S MNGF ++ +R+L
Sbjct: 1 MDLALALHIARRFSRGRRRGGMVSLISVISTVGIALGVAVLIVGLSAMNGFERELDQRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I P D+Q + R+D + DV+ P+V+ + S V VRG+
Sbjct: 61 SVVPHGEIYPVEQPFNDWQSVLARVDRVKDVVGAAPYVNFTGLMEHG-SQLRAVQVRGVD 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S + + N DF G +I + + M +
Sbjct: 120 PAQESRVSSLPRYVLDNAWADFRAGGQQVILGKGVADALGVRRGDWVTVMVPNSDPQMKL 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ +G D+ + + L +AQ Y +L+++V+GI + V DP +K
Sbjct: 180 LQPKRIRLQVGGILQLSGMLDHTLALVPLADAQQYQDLDDSVTGIAIRVADPFQADKVVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + V + W+ Y F +
Sbjct: 240 AAGEVTNDYVYIRSWKGTYGYMFRDIQ 266
>gi|293396553|ref|ZP_06640829.1| lipoprotein ABC superfamily ATP binding cassette transporter,
permease protein [Serratia odorifera DSM 4582]
gi|291420817|gb|EFE94070.1| lipoprotein ABC superfamily ATP binding cassette transporter,
permease protein [Serratia odorifera DSM 4582]
Length = 415
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 53/265 (20%), Positives = 108/265 (40%), Gaps = 1/265 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
S +++A R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ RVL +
Sbjct: 4 SPLSLLMALRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELQNRVLAV 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H I+ P + I R++ +P ++ P+++ + + V ++G+
Sbjct: 64 VPHGEIEPVNQPFNGWPQILQRVEKVPGILAAAPYINFTGLMENG-AQLRAVQLKGVDPQ 122
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ L G+ +F G+ +I + + M +
Sbjct: 123 QENQLSALPKYVQGDAWANFHSGEQQVILGKGVADALGVKQGSFVTVMIPNSDPQMKLLQ 182
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + D+ + + L +AQ Y ++ ++V+GI + V D A K +
Sbjct: 183 PKRIRLHVSGILQLSGQLDHSLAMVPLADAQQYLDMGDSVTGIAIKVNDVFAANKLVRDA 242
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ + V + W +Y + +
Sbjct: 243 GEVTNSYVYIKSWIGKYGYMYRDIQ 267
>gi|261822037|ref|YP_003260143.1| outer membrane-specific lipoprotein transporter subunit LolE
[Pectobacterium wasabiae WPP163]
gi|261606050|gb|ACX88536.1| lipoprotein releasing system, transmembrane protein LolE
[Pectobacterium wasabiae WPP163]
Length = 415
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 55/267 (20%), Positives = 113/267 (42%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
IF +++ R+ R+ +S+ S IS +G+ +GV LI+ +S MNGF ++ R+L
Sbjct: 2 IFPPLSLLIGLRFSRGRRRGGMVSLISVISTLGIALGVAVLILGLSAMNGFERELNNRIL 61
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ P D+Q I +++ +P V P+++ + + + +
Sbjct: 62 AVVPHGEIEPVNQPFDDWQDILPKIEQVPGVAAAAPYINFTGLLENGAKLQAIQVKGVDP 121
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + VIIG+ +A+ L ++ GD + ++ P D M
Sbjct: 122 QQETHLSALPNYVLNDAWQQFRPGEQQVIIGQGVAKTLNVAQGDWVTVMIPNSDPEMKLM 181
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + G+ + D+G+ + L +AQ Y ++ +V+GI + D + K
Sbjct: 182 QPKRIRLHISGILQ-LSGQLDHGLALIPLADAQQYLDMGPSVTGIAIKANDVFSANKLVR 240
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + V + W Y + +
Sbjct: 241 DAGNVTNAYVYIRSWIGTYGYMYRDIQ 267
>gi|238795994|ref|ZP_04639506.1| Lipoprotein-releasing system transmembrane protein lolE [Yersinia
mollaretii ATCC 43969]
gi|238720199|gb|EEQ12003.1| Lipoprotein-releasing system transmembrane protein lolE [Yersinia
mollaretii ATCC 43969]
Length = 415
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 55/264 (20%), Positives = 110/264 (41%), Gaps = 1/264 (0%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
+++ R+ R+ +S+ S IS +G+ +GV LIV +S MNGF ++ R+L +
Sbjct: 5 PLSLLIGLRFSRGRRRGGMVSLISVISTLGIALGVAVLIVGLSAMNGFERELKNRILAVV 64
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
H I P D+Q R++ +P ++ P+++ + + + + ++
Sbjct: 65 PHGEIAAVNQPFSDWQQSLQRIEKVPGILAAAPYINFTGLIENATQLRAVQVKGVDPEAE 124
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
N + +I+GK LA LG+ G + ++ P D + +
Sbjct: 125 QRLSALPSFVVDHAWDNFKAGQQQIILGKGLADALGVKQGSWLTVMIPNSDPEMKLLQPK 184
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
V G+F+ D+ + + L +AQ Y + ++V+GI + V D K +
Sbjct: 185 RIRLQVAGIFQ-LSGQLDHSLALVPLADAQQYLEMGDSVTGIAIKVNDVYNANKLVRSAG 243
Query: 246 RILGNGVVVIDWQQRYQIFFSCYE 269
+ V + W Y + +
Sbjct: 244 EVSNAYVYISSWIGTYGYMYRDIQ 267
>gi|165977483|ref|YP_001653076.1| outer membrane-specific lipoprotein transporter subunit LolE
[Actinobacillus pleuropneumoniae serovar 3 str. JL03]
gi|165877584|gb|ABY70632.1| lipoprotein releasing system transmembrane protein [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
Length = 416
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 49/265 (18%), Positives = 101/265 (38%), Gaps = 3/265 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY +KN +S+ S S IG+ +GV LI+ +S MNGF ++ +RVL + H
Sbjct: 4 PFFISWRYQRGKQKNRLVSLISLFSSIGIALGVAVLIIGLSAMNGFERELNQRVLSVVPH 63
Query: 68 VVIQQKYYPLVDYQF---IANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ L + + + VRG+
Sbjct: 64 AELYSYNGNENAPIQAGKKLENLANSNPNVTASSPFVSFTGLIENGTQLKIAQVRGVDPV 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + F + G+I+G +A++L ++ GD++ +L P
Sbjct: 124 KQDKVSSLSHYIPSEQWQAFHQQGGLILGAGIAKDLEVTAGDEVTLLLPQPTEDGKLAQP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
S V G+ ++ + + + +L N SGIE+ +K P +++
Sbjct: 184 LRFSLPVTGVLKLEGQLDHSYALLPIEKAQELLEYQPNEYSGIELALKAPFKVQELQMPE 243
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + W +++ ++ +
Sbjct: 244 LANFNQPLYLNTWIEKFGYMYNDIQ 268
>gi|91793032|ref|YP_562683.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Shewanella denitrificans OS217]
gi|91715034|gb|ABE54960.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella denitrificans OS217]
Length = 411
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 62/273 (22%), Positives = 121/273 (44%), Gaps = 6/273 (2%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M F + +RY + + NAF S + + G+ +GV+ALI+V SVMNG + +R
Sbjct: 1 MKNFG-VSFFIGYRYWRAKKANAFASFLTLFAVSGIFLGVVALILVSSVMNGLEGQLKQR 59
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+LG + + +Q ++ +P V+ +P V+ QA + + + G+ +
Sbjct: 60 ILGAIPQLTLVNDA-GFSQWQQDIAVIEALPQVLGAVPTVTTQAMIQSVDNIGAAQVYGI 118
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + S + +++G +LAR L ++IGDKI +LS G V
Sbjct: 119 FPEQEAALSAKIGSVYSDAFGTLEANQYHIVLGVELARKLNVNIGDKIRLLSGDGVVYSP 178
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN-AVSGIEVFVKDPDAIEK 239
+ S+ V+ D G+ Y+ Q+A+ LE+ +++ + +++ DP
Sbjct: 179 IGPVPSQRKFVVAGLFETGSQVDAGVAYVHYQDARRLMRLESLSINEVRLYLTDPFLAPD 238
Query: 240 THEN---IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ ++ G V DW+ + F+ +
Sbjct: 239 LSQQAISLMAQQGIEVHSRDWRADFGQLFAAVK 271
>gi|303250471|ref|ZP_07336668.1| outer membrane-specific lipoprotein transporter subunit LolE
[Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|307251512|ref|ZP_07533419.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|302650459|gb|EFL80618.1| outer membrane-specific lipoprotein transporter subunit LolE
[Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|306860976|gb|EFM92982.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 6 str. Femo]
Length = 416
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 49/265 (18%), Positives = 101/265 (38%), Gaps = 3/265 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY +KN +S+ S S IG+ +GV LI+ +S MNGF ++ +RVL + H
Sbjct: 4 PFFISWRYQRGKQKNRLVSLISLFSSIGIALGVAVLIIGLSAMNGFERELNQRVLSVVPH 63
Query: 68 VVIQQKYYPLVDYQF---IANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ L + + + VRG+
Sbjct: 64 AELYSYNGNENAPIQTGKKLENLANSNPNVTASSPFVSFTGLIENGTQLKIAQVRGVDPV 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + F + G+I+G +A++L ++ GD++ +L P
Sbjct: 124 KQDKVSSLSHYIPSEQWQAFHQQGGLILGAGIAKDLEVTAGDEVTLLLPQPTEDGKLAQP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
S V G+ ++ + + + +L N SGIE+ +K P +++
Sbjct: 184 LRFSLPVTGVLKLEGQLDHSYALLPIEKAQELLEYQPNEYSGIELALKAPFKVQELQMPE 243
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + W +++ ++ +
Sbjct: 244 LANFNQPLYLNTWIEKFGYMYNDIQ 268
>gi|123442015|ref|YP_001005998.1| outer membrane-specific lipoprotein transporter subunit LolE
[Yersinia enterocolitica subsp. enterocolitica 8081]
gi|122088976|emb|CAL11787.1| lipoprotein releasing system, transmembrane protein [Yersinia
enterocolitica subsp. enterocolitica 8081]
Length = 415
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 53/265 (20%), Positives = 110/265 (41%), Gaps = 1/265 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
S +++ R+ R+ +S+ S IS +G+ +GV LIV +S MNGF ++ R+L +
Sbjct: 4 SPLSLLIGLRFSRGRRRGGMVSLISVISTLGIALGVAVLIVGLSAMNGFERELKNRILAV 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H I P + R++ +P ++ P+++ + + + + +
Sbjct: 64 VPHGEIAVVNQPFSGWPQTLQRVEKVPGIVAAAPYINFTGLIENGTQLRAVQVKGVDPEA 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ N + +I+GK LA LG+ G + ++ P D +
Sbjct: 124 EQRLSALPSFVLDHAWDNFKAGQQQIILGKGLADALGVKQGSWLTVMIPNSDPEMKLLQP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ V G+F+ D+ + + L +AQ Y ++ ++V+G+ + V D K +
Sbjct: 184 KRIRLQVAGVFQ-LSGQLDHSLALVPLVDAQQYLDMGDSVTGVAIKVDDVYNANKLVRSA 242
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ V + W Y + +
Sbjct: 243 GEVSNAYVYISSWIGTYGYMYRDIQ 267
>gi|323228046|gb|EGA12187.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB110209-0055]
Length = 300
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 52/267 (19%), Positives = 109/267 (40%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ S +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L
Sbjct: 1 MASPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ P +++ ++ +P + P+++ V ++ + +
Sbjct: 61 AVVPHGEIEAVNQPWTNWREALAKVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + +IIGK +A L + GD ++I+ P + +
Sbjct: 121 KQEQQLSALPSFVQNHAWDHFKAGEQQIIIGKGVADALNVKQGDWVSIMIPNANADHKLL 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + L++AQ Y ++ +VSGI + V D K
Sbjct: 181 QPKRVRLH-VIGILQLSGQLDHSFAMIPLEDAQQYLDMGASVSGIALKVHDVFNANKLVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|307260441|ref|ZP_07542136.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 12 str. 1096]
gi|306869844|gb|EFN01626.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 12 str. 1096]
Length = 416
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 48/265 (18%), Positives = 101/265 (38%), Gaps = 3/265 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY +KN +S+ S S +G+ +GV LI+ +S MNGF ++ +RVL + H
Sbjct: 4 PFFISWRYQRGKQKNRLVSLISLFSSVGIALGVAVLIIGLSAMNGFERELNQRVLSVVPH 63
Query: 68 VVIQQKYYPLVDYQF---IANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ L + + + VRG+
Sbjct: 64 AELYSYNGNENAPIQAGKKLENLANSNPNVTASSPFVSFTGLIENGTQLKIAQVRGVDPV 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + F + G+I+G +A++L ++ GD++ +L P
Sbjct: 124 KQDKVSSLSHYIPSEQWQAFHQQGGLILGAGIAKDLEVAAGDEVTLLLPQPTEDGKLAQP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
S V G+ ++ + + + +L N SGIE+ +K P +++
Sbjct: 184 LRFSLPVTGVLKLEGQLDHSYALLPIEKAQELLEYQPNEYSGIELALKAPFKVQELQMPE 243
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + W +++ ++ +
Sbjct: 244 LANFNQPLYLNTWIEKFGYMYNDIQ 268
>gi|297172545|gb|ADI23515.1| ABC-type transport system, involved in lipoprotein release,
permease component [uncultured Gemmatimonadales
bacterium HF0770_41L09]
Length = 428
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 56/278 (20%), Positives = 105/278 (37%), Gaps = 17/278 (6%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
R +A YL + R +S+ ++I+ GV++GV AL+VV+ VM+G ++D+ ++L
Sbjct: 12 RLYWFIARHYLRAGRGRGLLSLITWIALGGVIVGVTALVVVIGVMSGMQKDLQAKILEST 71
Query: 66 GHVVIQQKYY--PLVDYQFIANRLDFIPDVIKVLPFVSGQ-----------AFVSGLSSG 112
H+++ + L +++ + + + + V+ PFV Q S G
Sbjct: 72 PHIMVLESGTTLRLYEWEEVVDLVMEVDGVVGAAPFVLSQVSVARTGTDGFYPQSANLYG 131
Query: 113 GSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILS 172
S R + S G + + G ++ +
Sbjct: 132 ISIDTGRVAPTEMERKIVEGIHNLTLPESGLSPLLMGGGLADRMQLFEGDTLL--VVSFE 189
Query: 173 PYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL--ENAVSGIEVF 230
G+ + + V G+F DYD VY +L+ AQ + VSG+ +
Sbjct: 190 NLKMDILGGLNPTMRQFEVTGVFTTGMYDYDMQNVYTTLEAAQELVGITNPGVVSGVGIR 249
Query: 231 VKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ P+ ++ I LG W + FS
Sbjct: 250 TRQPELADEVRGKIQESLGFPFHAESWMTTNRALFSAL 287
>gi|261879007|ref|ZP_06005434.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270334391|gb|EFA45177.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 445
Score = 117 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 52/273 (19%), Positives = 97/273 (35%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ F VA RYLFS +K I++ S IS IGV + MAL++VMSV NGF + +
Sbjct: 23 NSFPFFVARRYLFSKKKTHAINVISLISVIGVAVATMALVIVMSVFNGFHDLVASFFTNF 82
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + + V + V ++ + + V V+G+ ++
Sbjct: 83 DPQIKVMPVMGKTVPADDPILTEIRQLPQVDVATETVEDIALAVYNDNQAVVKVKGVDDN 142
Query: 125 DFSYLQNSFSRFYGNVSNDF-----DRGKGVIIGKDLARNLGISIGDKINILSPYGD--- 176
+ + G+ + ++L K+ G
Sbjct: 143 FDQLTHITEILYGEGEFKLHTANLQFGTPGIRLAQELGTGTQWRDYMKLYAPRREGQLDL 202
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
P + + +F + YD ++ SL AQ VS +E+ +K
Sbjct: 203 SNPEDGFVADSLISSGVVFSVNQGKYDKNLIITSLGFAQNLLGQPGMVSALELRLKPGSD 262
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + +I G+ V+D ++ F +
Sbjct: 263 FDNVKSKMQKIAGDKYKVLDRFEQQADTFKIMQ 295
>gi|284007311|emb|CBA72656.1| lipoprotein-releasing system transmembrane protein [Arsenophonus
nasoniae]
Length = 425
Score = 117 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 59/262 (22%), Positives = 116/262 (44%), Gaps = 1/262 (0%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A R+ ++ +S+ S IS +G+++GV LI+ +S MNGF ++ R+L + H
Sbjct: 17 ALKIALRFSRGKKRAGLVSLISIISTLGIVLGVAVLIIGLSAMNGFERELKNRILSVVPH 76
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
I P +++Q ++ P V+ V P+++ + S+ + + +S+ +
Sbjct: 77 GQIAAVNQPYLNWQADLAKVRQTPGVVGVSPYINFTGLLEKGSALKAIQVAGVDLSSEQT 136
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+I+G+ +A L +S GD I I+ P D
Sbjct: 137 VSSLPDFILNNAWQKLKPGNNEIILGQGVAETLKVSPGDHITIMIPNHDDKLRIQQPNRI 196
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ TV+G+F+ D+ + + LQ+AQ Y + ++G ++ V D A K +
Sbjct: 197 NVTVIGVFK-LNGMLDHQLAIVPLQDAQQYLAYGDGITGFQISVTDVFAANKVVYDAGIN 255
Query: 248 LGNGVVVIDWQQRYQIFFSCYE 269
G+ V + W Y +S +
Sbjct: 256 TGHYVTIKSWITDYGYMYSDIQ 277
>gi|300869872|ref|YP_003784743.1| lipoprotein [Brachyspira pilosicoli 95/1000]
gi|300687571|gb|ADK30242.1| lipoprotein releasing system transmembrane protein, LolC E family
[Brachyspira pilosicoli 95/1000]
Length = 431
Score = 117 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 53/261 (20%), Positives = 109/261 (41%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
++ RYL + +K +F+SI + I +G+++G M +I V+SVMNGF++D+ ++LG+ H+
Sbjct: 1 MLGVRYLKAKKKFSFVSIITVICILGILVGDMVMITVLSVMNGFQDDIRDKILGMRAHIN 60
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
I + I + + + + + VR + F+
Sbjct: 61 ISAYGDQPLLNYEYVVDNIKDNKEITSIYPYIVLPSIMRTYTFTTLITVRSFEDDIFTKD 120
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
++ F + + G + + + G + ++
Sbjct: 121 RDFIKYFKFIEGGNKNLGTNDALIGSEMADDYALSVGDTIDIVSASGSFEKGFRPQKTTF 180
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
T+ G+++ + +YD+ MV + L+ AQ E V+G+ V +K+ +K +NI L
Sbjct: 181 TIKGIYKTGYYEYDSKMVIVPLKTAQAMMGYEGGVTGVAVKIKNFFDADKVAKNIDLSLK 240
Query: 250 NGVVVIDWQQRYQIFFSCYES 270
V+ W + FF +
Sbjct: 241 QFYNVMPWMLFDRNFFQALHT 261
>gi|307253746|ref|ZP_07535600.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|307256011|ref|ZP_07537799.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 10 str. D13039]
gi|307258203|ref|ZP_07539946.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 11 str. 56153]
gi|306863230|gb|EFM95170.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|306865433|gb|EFM97328.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 10 str. D13039]
gi|306867663|gb|EFM99508.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 11 str. 56153]
Length = 416
Score = 117 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 48/265 (18%), Positives = 101/265 (38%), Gaps = 3/265 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY +KN +S+ S S +G+ +GV LI+ +S MNGF ++ +RVL + H
Sbjct: 4 PFFISWRYQRGKQKNRLVSLISLFSSVGIALGVAVLIIGLSAMNGFERELNQRVLSVVPH 63
Query: 68 VVIQQKYYPLVDYQF---IANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ L + + + VRG+
Sbjct: 64 AELYSYNGNENAPIQAGKKLENLANSNPNVTASSPFVSFTGLIENGTQLKIAQVRGVDPV 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + F + G+I+G +A++L ++ GD++ +L P
Sbjct: 124 KQDKVSSLSHYIPSEQWQAFHQQGGLILGAGIAKDLEVTAGDEVTLLLPQPTEDGKLAQP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
S V G+ ++ + + + +L N SGIE+ +K P +++
Sbjct: 184 LRFSLPVTGVLKLEGQLDHSYALLPIEKAQELLEYQPNEYSGIELALKAPFKVQELQMPE 243
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + W +++ ++ +
Sbjct: 244 LANFNQPLYLNTWIEKFGYMYNDIQ 268
>gi|262277282|ref|ZP_06055075.1| ABC transporter [alpha proteobacterium HIMB114]
gi|262224385|gb|EEY74844.1| ABC transporter [alpha proteobacterium HIMB114]
Length = 407
Score = 117 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 67/267 (25%), Positives = 126/267 (47%), Gaps = 8/267 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ ++ E+++ RYL K+ F+ + S SFIG+M+GV LI+VMSVMNGFR D++ ++L
Sbjct: 1 MINKAEILIISRYLKPKNKDGFLRVISNFSFIGIMLGVATLIIVMSVMNGFRIDLLDKLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G H+ Q K ++ + I N I L V+ + + GVLV+ S
Sbjct: 61 GYQPHISFQSKGKYNLEKESIINFAKKNNFKISDLNLVNNSEALILTQNKNYGVLVKSFS 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
++ + + N+ G G+ + L + +GD + +LS + TP G+
Sbjct: 121 KNEIKDIYFLKNSIVKGKVNENGIGVGLELASKL----SLGVGDNLTLLSNNTETTPFGI 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ ++ V +F ++DN + +L +++ + N EN IE+ + +PD
Sbjct: 177 LPKQFNFKVSFIFNTGMYEFDNNFLISNLDQSKFFSNKENE---IEIRINNPDNSNNFTN 233
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + + + W + FF +
Sbjct: 234 VLKQKYNDRL-IYSWVDSNKTFFDALK 259
>gi|322616595|gb|EFY13504.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Montevideo
str. 315996572]
gi|322619890|gb|EFY16764.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-1]
gi|322622458|gb|EFY19303.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-3]
gi|322629424|gb|EFY26201.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-4]
gi|322636835|gb|EFY33538.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Montevideo
str. 515920-2]
gi|322641365|gb|EFY38004.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Montevideo
str. 531954]
gi|322645130|gb|EFY41659.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Montevideo
str. NC_MB110209-0054]
gi|322652294|gb|EFY48650.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Montevideo
str. OH_2009072675]
gi|322655645|gb|EFY51947.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Montevideo
str. CASC_09SCPH15965]
gi|322660950|gb|EFY57180.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Montevideo
str. 19N]
gi|322665464|gb|EFY61652.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Montevideo
str. 81038-01]
gi|322667559|gb|EFY63720.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Montevideo
str. MD_MDA09249507]
gi|322673647|gb|EFY69749.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Montevideo
str. 414877]
gi|322677573|gb|EFY73637.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Montevideo
str. 366867]
gi|322679762|gb|EFY75801.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Montevideo
str. 413180]
gi|322687235|gb|EFY83207.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Montevideo
str. 446600]
gi|323194021|gb|EFZ79222.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Montevideo
str. 609458-1]
gi|323199430|gb|EFZ84523.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Montevideo
str. 556150-1]
gi|323203618|gb|EFZ88640.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Montevideo
str. 609460]
gi|323208841|gb|EFZ93779.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Montevideo
str. 507440-20]
gi|323209823|gb|EFZ94742.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Montevideo
str. 556152]
gi|323217815|gb|EGA02530.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB101509-0077]
gi|323218874|gb|EGA03385.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB102109-0047]
gi|323229618|gb|EGA13741.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB111609-0052]
gi|323232843|gb|EGA16939.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Montevideo
str. 2009083312]
gi|323240121|gb|EGA24165.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Montevideo
str. 2009085258]
gi|323242892|gb|EGA26913.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Montevideo
str. 315731156]
gi|323246808|gb|EGA30778.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2009159199]
gi|323254292|gb|EGA38109.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008282]
gi|323255558|gb|EGA39317.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008283]
gi|323259392|gb|EGA43028.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008284]
gi|323266988|gb|EGA50473.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008285]
gi|323272092|gb|EGA55506.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008287]
Length = 414
Score = 117 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 52/267 (19%), Positives = 109/267 (40%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ S +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L
Sbjct: 1 MASPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ P +++ ++ +P + P+++ V ++ + +
Sbjct: 61 AVVPHGEIEAVNQPWTNWREALAKVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + +IIGK +A L + GD ++I+ P + +
Sbjct: 121 KQEQQLSALPSFVQNHAWDHFKAGEQQIIIGKGVADALNVKQGDWVSIMIPNANADHKLL 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + L++AQ Y ++ +VSGI + V D K
Sbjct: 181 QPKRVRLH-VIGILQLSGQLDHSFAMIPLEDAQQYLDMGASVSGIALKVHDVFNANKLVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|307244792|ref|ZP_07526891.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|306854237|gb|EFM86443.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
Length = 416
Score = 117 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 48/265 (18%), Positives = 101/265 (38%), Gaps = 3/265 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY +KN +S+ S S +G+ +GV LI+ +S MNGF ++ +RVL + H
Sbjct: 4 PFFISWRYQRGKQKNRLVSLISLFSSVGIALGVAVLIIGLSAMNGFERELNQRVLSVVSH 63
Query: 68 VVIQQKYYPLVDYQF---IANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ L + + + VRG+
Sbjct: 64 AELYSYNGNENAPIQAGKKLENLANSNPNVTASSPFVSFTGLIENGTQLKIAQVRGVDPV 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + F + G+I+G +A++L ++ GD++ +L P
Sbjct: 124 KQDKVSSLSHYIPSEQWQAFHQQGGLILGAGIAKDLEVAAGDEVTLLLPQPTEDGKLAQP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
S V G+ ++ + + + +L N SGIE+ +K P +++
Sbjct: 184 LRFSLPVTGVLKLEGQLDHSYALLPIEKAQELLEYQPNEYSGIELALKAPFKVQELQMPE 243
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + W +++ ++ +
Sbjct: 244 LANFNQPLYLNTWIEKFGYMYNDIQ 268
>gi|226330508|ref|ZP_03806026.1| hypothetical protein PROPEN_04426 [Proteus penneri ATCC 35198]
gi|225201303|gb|EEG83657.1| hypothetical protein PROPEN_04426 [Proteus penneri ATCC 35198]
Length = 415
Score = 117 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 56/264 (21%), Positives = 105/264 (39%), Gaps = 1/264 (0%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
++ A R+ ++ +S+ S IS +G+M+GV LI+ +S MNGF ++ R+L +
Sbjct: 5 PLALVTALRFSRGRKRAGMVSLISVISTLGIMLGVAVLIIGLSAMNGFERELKNRILSVV 64
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
H I P V +Q R++ V+ P++ + + + ++
Sbjct: 65 PHGQIYSVEQPFVQWQSALPRIENTQGVVAAAPYILLTGLLEKGTELKAVQVMGVSPEKQ 124
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ + +IIG+ +A L I GD + +L P D + +
Sbjct: 125 SDISLLPRYVQNNAWQDFRAGKQQIIIGQGVADALKIKQGDWLTVLIPNNDDPTKLLQPK 184
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
V G+F+ D+ + + L +AQ Y + ++GIEV DP + +
Sbjct: 185 RIRLQVSGIFK-LSGMLDHQLALIPLADAQQYMDYGQGITGIEVKTVDPFFANEIIHDAG 243
Query: 246 RILGNGVVVIDWQQRYQIFFSCYE 269
V W Y +S +
Sbjct: 244 LNSKEYVYAKSWISDYGYMYSDIQ 267
>gi|307249189|ref|ZP_07531186.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 4 str. M62]
gi|306858713|gb|EFM90772.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 4 str. M62]
Length = 416
Score = 117 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 48/265 (18%), Positives = 100/265 (37%), Gaps = 3/265 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY +KN +S+ S S G+ +GV LI+ +S MNGF ++ +RVL + H
Sbjct: 4 PFFISWRYQRGKQKNRLVSLISLFSSFGIALGVAVLIIGLSAMNGFERELNQRVLSVVPH 63
Query: 68 VVIQQKYYPLVDYQF---IANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ L + + + VRG+
Sbjct: 64 AELYSYNGNENAPIQAGKKLENLANSNPNVTASSPFVSFTGLIENGTQLKIAQVRGVDPV 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + F + G+I+G +A++L ++ GD++ +L P
Sbjct: 124 KQDKVSSLSHYIPSEQWQAFHQQGGLILGAGIAKDLEVTAGDEVTLLLPQPTEDGKLAQP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
S V G+ ++ + + + +L N SGIE+ +K P +++
Sbjct: 184 LRFSLPVTGVLKLEGQLDHSYALLPIEKAQELLEYQPNEYSGIELALKAPFKVQELQMPE 243
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + W +++ ++ +
Sbjct: 244 LANFNQPLYLNTWIEKFGYMYNDIQ 268
>gi|294505835|ref|YP_003569893.1| Lipoprotein releasing system transmembrane protein lolC
[Salinibacter ruber M8]
gi|294342163|emb|CBH22941.1| Lipoprotein releasing system transmembrane protein lolC
[Salinibacter ruber M8]
Length = 419
Score = 117 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 57/275 (20%), Positives = 102/275 (37%), Gaps = 12/275 (4%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+ +A RYL S R+ + ISI + IS +GV +GV +LIVV+SVMNGF + + ++ ++
Sbjct: 3 YRFQIARRYLASRREVSLISIITGISTVGVTLGVASLIVVLSVMNGFYDVVRDVLVSLDP 62
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSG---GSGVLVRGISN 123
HV + V R+ + + + V VRG+
Sbjct: 63 HVRVVSAQGEGVANVDSLLRVARETRHVTAAAPYVEGKALLMSDNTGDANRVVRVRGVEA 122
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--------SPYG 175
S + + ++S + D GV++ + L + G+ +
Sbjct: 123 SMMEGAAPTTAMGRFDLSRNADGVPGVVLNQRLGQRAGLVPAGRTQSSTAVGLLSAPAVE 182
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD 235
G + V++SL EAQ F E V+G+E+ + + +
Sbjct: 183 RTLTNIFGSPPVRRFEVRGLFQSQGTSQGQRVFVSLAEAQQLFRTEGRVTGVELRLDNLE 242
Query: 236 AIEKTHENIVRILGNG-VVVIDWQQRYQIFFSCYE 269
+ R LG V W + + +
Sbjct: 243 RAAGVKAALQRKLGTDRYTVQTWYDLQRSLYDVMQ 277
>gi|304322125|ref|YP_003855768.1| hypothetical protein PB2503_12944 [Parvularcula bermudensis
HTCC2503]
gi|303301027|gb|ADM10626.1| hypothetical protein PB2503_12944 [Parvularcula bermudensis
HTCC2503]
Length = 429
Score = 117 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 69/269 (25%), Positives = 116/269 (43%), Gaps = 2/269 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F RFE VA RYL + R+ A +S+ + I+F G+M+ V LIVVMSV GFR +++ ++L
Sbjct: 14 FGRFEWSVARRYLGATRRGAGVSLITLIAFSGIMLSVATLIVVMSVFQGFRVNLLSQLLS 73
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+NGHV +Q Q + + S + +
Sbjct: 74 VNGHVFVQNTESVDRAQQISRIEDLTFVKRATPVLRIETYLVGPRGQSAAQTIGITAEDL 133
Query: 124 SDFSYLQNSFSRFYGNVSND-FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + + V IG L+R LG S+GD I+ ++ G TP G
Sbjct: 134 RAIEDIADGVRAGSLDTFGAGETGQREVAIGVGLSRLLGASVGDVISAITAGGAETPFGR 193
Query: 183 GIRSK-SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
++ Y V +F + +D +Y+ L++AQ + V+ IE+ + DP +
Sbjct: 194 TPTTQIQYRVGAIFSVGNSFFDQYYMYLPLEQAQRFARRPGEVTEIELRISDPLTPDLVL 253
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYES 270
I G + DW+ R F+ ++
Sbjct: 254 PAIQAAAGEAAYLSDWRDRNADLFNAVQA 282
>gi|262404229|ref|ZP_06080784.1| lipoprotein releasing system transmembrane protein LolE [Vibrio sp.
RC586]
gi|262349261|gb|EEY98399.1| lipoprotein releasing system transmembrane protein LolE [Vibrio sp.
RC586]
Length = 408
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 51/260 (19%), Positives = 104/260 (40%), Gaps = 1/260 (0%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+ R+ + ++N +S S S IG+ +GV +I+ +S MNGF ++ RVL + H
Sbjct: 2 FIGGRFSRAKQRNKMVSFISLSSTIGIAVGVAVIIIGLSAMNGFERELQSRVLSVIPHGE 61
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ P+ + + ++ P ++ P+V A + + + + +
Sbjct: 62 FEGVRGPIERWPEVMAQVTRHPKIVAAAPYVKMTALAEHGTQLKAIEVRGVDPQREQAVS 121
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
S + + VI+G+ +A LG+ +GD I ++ P +
Sbjct: 122 SLSRFITPQAWQHFIPGQQQVILGQGVADKLGVQLGDFITLMIPSATSGEKVQAPKRVRV 181
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
+ D+ + + L++AQ Y NL + V+G+ V V + + L
Sbjct: 182 -KVSGLLALNGQIDHSLALLPLEDAQAYANLGSGVTGVSVKVANVLQATEIVREAGNKLN 240
Query: 250 NGVVVIDWQQRYQIFFSCYE 269
+ WQQ+Y + +
Sbjct: 241 VYAYLHSWQQKYGFLYRDIQ 260
>gi|251792437|ref|YP_003007163.1| lipoprotein releasing system, transmembrane protein LolC
[Aggregatibacter aphrophilus NJ8700]
gi|247533830|gb|ACS97076.1| lipoprotein releasing system, transmembrane protein LolC
[Aggregatibacter aphrophilus NJ8700]
Length = 394
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 48/267 (17%), Positives = 91/267 (34%), Gaps = 11/267 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +A RY + + F + + ++ G+++GVMALI+V+SVMNG ++VL
Sbjct: 1 MMLSTPLFIALRYWRAKSADRFGRLVTNLASFGIVLGVMALIIVLSVMNGLEGHQKQQVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H ++ +D + V + V Q + GV
Sbjct: 61 SSLPHAIVSPANKVNIDETMPSMPNFVHKAVPINMTNVIFQTASGVSAGQVIGVREFDDD 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
F+ G +IIG LA+ L I +GDK+ ++
Sbjct: 121 PMLGGLPTQDFNS------VLPAGGFNIIIGDQLAQKLNIYVGDKVRLMITENSQYTPFG 174
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
+ + + + + +L + + G +F+ DP I
Sbjct: 175 RVPLQRLFTVSEIYFDTGEASGYEAFANLTDIGRLMRIQPGEAQGYRLFLTDPFLI---- 230
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + DW+ + FF
Sbjct: 231 TELPTAFPEPYQITDWRAQKGEFFQAV 257
>gi|317047733|ref|YP_004115381.1| lipoprotein releasing system, transmembrane protein LolE [Pantoea
sp. At-9b]
gi|316949350|gb|ADU68825.1| lipoprotein releasing system, transmembrane protein LolE [Pantoea
sp. At-9b]
Length = 414
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 105/267 (39%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +++ R+ R+ +S+ S IS +G+ +GV LI+ +S MNGF ++ R+L
Sbjct: 1 MTPSLSLLLGLRFSRGRRRGGMVSLISIISTVGIALGVAVLIIGLSAMNGFERELNNRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ P ++Q + ++ +P + P+V+ + + + V+G+
Sbjct: 61 AVVPHGEIEPVNQPFRNWQPMIAPIEQVPGIAAAAPYVNFTGLIESG-AKLQALQVKGVD 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
L G+ + F GK II + + +
Sbjct: 120 PQQEPRLSALPRFVAGDAWSQFAAGKQQIILGGGIATSLNVKQGDWITIMIPNNDGENKL 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + + L +AQ Y ++ ++VSGI + + DP +K
Sbjct: 180 LQPKRIRLQVSGILQLSGMLDHSLALVPLADAQSYLDMGDSVSGIALKMSDPFKAQKLVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 240 DAGEVTHSYVYIRSWIGTYGYMYRDIQ 266
>gi|83815798|ref|YP_444177.1| hypothetical protein SRU_0019 [Salinibacter ruber DSM 13855]
gi|83757192|gb|ABC45305.1| membrane protein, putative [Salinibacter ruber DSM 13855]
Length = 419
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 60/276 (21%), Positives = 112/276 (40%), Gaps = 14/276 (5%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+ +A RYL S R+ + ISI + IS +GV +GV +LIVV+SVMNGF + + ++ ++
Sbjct: 3 YRFQIARRYLASRREVSLISIITGISTVGVTLGVASLIVVLSVMNGFYDVVRGVLVSLDP 62
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSG---GSGVLVRGISN 123
HV + V R+ + + + V VRG+
Sbjct: 63 HVRVVSAQGEGVANVDSLLRVARETRHVTAAAPYVEGKALLMSDNTGDANRVVRVRGVEA 122
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSP---------Y 174
S + + ++S + D GV++ + L + G+ + +
Sbjct: 123 SMMKGAAPTMAMGRFDLSRNADGVPGVVLNQRLGQRAGLVPAGRTQSSTAVGLLSAPAVE 182
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
+T + + + V G+F+ + V++SL EAQ F E V+G+E+ + +
Sbjct: 183 RTLTNIFGSPPVRRFEVRGLFQSQGTSKG-QRVFVSLAEAQQLFRTEGRVTGVELRLDNL 241
Query: 235 DAIEKTHENIVRILGNG-VVVIDWQQRYQIFFSCYE 269
+ + R LG V W + + +
Sbjct: 242 ERAAGVKAALQRKLGTDRYTVQTWYDLQRSLYDVMQ 277
>gi|238783789|ref|ZP_04627808.1| Lipoprotein-releasing system transmembrane protein lolE [Yersinia
bercovieri ATCC 43970]
gi|238715340|gb|EEQ07333.1| Lipoprotein-releasing system transmembrane protein lolE [Yersinia
bercovieri ATCC 43970]
Length = 415
Score = 116 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 55/264 (20%), Positives = 110/264 (41%), Gaps = 1/264 (0%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
+++ R+ R+ +S+ S IS +G+ +GV LIV +S MNGF ++ R+L +
Sbjct: 5 PLSLLIGLRFSRGRRRGGMVSLISVISTLGIALGVTVLIVGLSAMNGFERELKNRILAVV 64
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
H I P D+ R++ +P ++ P+++ + + + + S+
Sbjct: 65 PHGEIAAVNQPFADWSSSLQRIEKVPGILAAAPYINFTGLIENATQLRAVQVKGVDPESE 124
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
N + +I+GK LA LG+ G + ++ P D + +
Sbjct: 125 QRLSALPSFVADHAWDNFKAGQQQIILGKGLADALGVKQGSWLTVMIPNSDPEMKLLQPK 184
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
V G+F+ D+ + + L +AQ Y ++ ++V+GI + V D K +
Sbjct: 185 RIRLQVAGIFQ-LSGQLDHSLALVPLADAQQYLDMGDSVTGIAIKVDDVYNANKLVRSAG 243
Query: 246 RILGNGVVVIDWQQRYQIFFSCYE 269
+ V + W Y + +
Sbjct: 244 EMSNAYVYISSWIGTYGYMYRDIQ 267
>gi|238754402|ref|ZP_04615758.1| Lipoprotein-releasing system transmembrane protein lolE [Yersinia
ruckeri ATCC 29473]
gi|238707435|gb|EEP99796.1| Lipoprotein-releasing system transmembrane protein lolE [Yersinia
ruckeri ATCC 29473]
Length = 415
Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 56/269 (20%), Positives = 105/269 (39%), Gaps = 2/269 (0%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
MS F +++ R+ R+ +S+ S +S +G+ +GV LI+ +S MNGF ++ R
Sbjct: 1 MSRF-PLSLLIGLRFSRGRRRGGMVSMISVVSTLGIALGVAVLIIGLSAMNGFERELKNR 59
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
VL + H I P + R++ +P V P++ + + + +
Sbjct: 60 VLAVVPHGQIAFLDQPFNSWNESLQRIEQVPGVAAAAPYIDFTGLMENGAQLRAVQVKGV 119
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + + VI+GK LA LG+ G + ++ P D
Sbjct: 120 NPQQEEQLSALPKFVQDNAWKDFKAGQQQVILGKGLADALGVKPGSWLTVMIPNSDPEMK 179
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ + V G+F+ D+ + + L +AQ Y ++ N+V+GI + D
Sbjct: 180 LLQPKRIRLQVAGVFQ-LSGQLDHSLALVPLSDAQQYLDMGNSVTGIALKFNDVFNANNL 238
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
N V W Y + +
Sbjct: 239 TRNAAEASNAYVNYSSWIGTYGYMYRDIQ 267
>gi|304312928|ref|YP_003812526.1| ABC lipoprotein exporter, inner membrane subunit [gamma
proteobacterium HdN1]
gi|301798661|emb|CBL46893.1| ABC lipoprotein exporter, inner membrane subunit [gamma
proteobacterium HdN1]
Length = 416
Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 64/272 (23%), Positives = 120/272 (44%), Gaps = 7/272 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+N FIS S S +G+ +GV LIVV++VM+GF ++ R+L
Sbjct: 1 MFRPLPLYIGLRYTRAKRRNHFISFISLTSILGLTLGVAVLIVVLAVMSGFDRELQSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ + + L D+Q + + V+ P+V Q +S ++
Sbjct: 61 GMVSQAEV-TEEGGLKDWQRVVDVAQKTRGVVGAAPYVQLQGLLSHQGLVSGALVSGISP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G + + +++G +AR LG+++GD++ ++ P + P G+
Sbjct: 120 DLEGRVSVLPEHMVSGQIESLQAGQFNIVLGYGVARKLGLALGDRVALVLPEASIGPAGV 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R K +TV G+FR+ D + Y++L++A+ V G+ + V D E
Sbjct: 180 LPRFKRFTVTGVFRVGAEVDDL-IAYIALEDARKLARSGERVHGVRLKVDDLLKARVIAE 238
Query: 243 NIVRILGNG-----VVVIDWQQRYQIFFSCYE 269
+ L DW + Y F +
Sbjct: 239 RVAAQLQASTEAGLYQTGDWTRTYGNLFQAVK 270
>gi|297171665|gb|ADI22659.1| ABC-type transport system, involved in lipoprotein release,
permease component [uncultured Gemmatimonadales
bacterium HF0500_22O06]
Length = 428
Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 55/278 (19%), Positives = 105/278 (37%), Gaps = 17/278 (6%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
R +A YL + R +S+ ++I+ GV++GV AL+VV+ VM+G ++D+ ++L
Sbjct: 12 RLYWFIARHYLRAGRGRGLLSLITWIALGGVIVGVTALVVVIGVMSGMQKDLQAKILEST 71
Query: 66 GHVVIQQKYY--PLVDYQFIANRLDFIPDVIKVLPFVSGQ-----------AFVSGLSSG 112
H+++ + L +++ + + + + V+ PFV Q S G
Sbjct: 72 PHIIVLESGTTLRLHEWEEVVDLVMEVDGVVGAAPFVLSQVSVARTGTDGLYPQSANLYG 131
Query: 113 GSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILS 172
S R + S GV + + G ++ +
Sbjct: 132 ISIDTGRVAPTEMERQIVEGIYNLTLPESGLSPLLMGVGLADRMQLFEGDTLL--VVSFE 189
Query: 173 PYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL--ENAVSGIEVF 230
G+ + + V G+F DYD VY +L+ AQ + V G+ +
Sbjct: 190 NLKMDILGGLNPTMRQFEVTGVFTTGMYDYDMQNVYTTLEAAQELVGITNPGVVGGVGIR 249
Query: 231 VKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ P+ ++ + LG W + FS
Sbjct: 250 TRQPELADEVRGKVQESLGFPFYAESWMTTNRALFSAL 287
>gi|290475835|ref|YP_003468727.1| transport protein of outer membrane lipoproteins (ABC superfamily,
membrane) [Xenorhabdus bovienii SS-2004]
gi|289175160|emb|CBJ81963.1| transport protein of outer membrane lipoproteins (ABC superfamily,
membrane) [Xenorhabdus bovienii SS-2004]
Length = 415
Score = 116 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 51/264 (19%), Positives = 107/264 (40%), Gaps = 1/264 (0%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
+ A R+ R+ +S+ S IS +G+M+GV LI+ +S MNGF ++ RVL +
Sbjct: 5 PLALFTALRFSRGRRRAGMVSLVSVISTLGIMLGVAVLIIGLSAMNGFERELKNRVLSVV 64
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
H I P ++ R+ ++ P++ + + + ++
Sbjct: 65 PHGQIYTVEQPFQHWEQALERVKQTVGIVGASPYIEFTGLMEKGEKLHAVQIQGVEPTTE 124
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
VI+G+ +A +L + GD + ++ P D + + +
Sbjct: 125 ADVSALPQFVGDDAWKAFHAGKHQVILGQGVAHSLHVKQGDWLTVMIPNSDPSLKLLQPK 184
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
V G+F+ D+ + + L +AQ Y + +A++GI + + A E+ +
Sbjct: 185 RIRLQVAGIFQ-LSGMLDHRLALVPLSDAQQYLDYGHAITGIAIKADNVFAAEQRVLDAG 243
Query: 246 RILGNGVVVIDWQQRYQIFFSCYE 269
+ V + W + Y ++ +
Sbjct: 244 KSTEKYVYISTWIKDYGYMYNDIQ 267
>gi|325105737|ref|YP_004275391.1| protein of unknown function DUF214 [Pedobacter saltans DSM 12145]
gi|324974585|gb|ADY53569.1| protein of unknown function DUF214 [Pedobacter saltans DSM 12145]
Length = 408
Score = 116 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 59/268 (22%), Positives = 108/268 (40%), Gaps = 4/268 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+A RYLFS + I+I S IS +GV +G ALI+++SV NGF + ++
Sbjct: 1 MNIAFYIAKRYLFSKKSTNAINIISGISMLGVFVGSAALIIILSVFNGFEDLVLSMYNYH 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + I+ K + D + V + + + ++G+S+
Sbjct: 61 SPDLKIEPKTGKVFDPTTSDFEKVKSLNNYVSYTQVLQEKALLRYGNYQFIGQIKGVSDD 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN----ILSPYGDVTPM 180
S G D +IG + LG++I D+I G +
Sbjct: 121 YLKDPYVDSSLVNGEFILKDDYANYAVIGSTVQYVLGVNINDQIRKLEIYSPIKGRKSSF 180
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
S + + + +N M + L A++ + VS IE+F+KDP+ +
Sbjct: 181 SAAEEFVSEQLQPVGVFQVQQEENNMAIIPLNTARILVGEDKNVSYIEIFLKDPEQSDAI 240
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ I +ILGN +V + Q+ ++ +
Sbjct: 241 KKKIEQILGNKFLVKNRIQQNELLYKVL 268
>gi|15801235|ref|NP_287252.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli O157:H7 EDL933]
gi|15830750|ref|NP_309523.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli O157:H7 str. Sakai]
gi|168751332|ref|ZP_02776354.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli O157:H7 str. EC4113]
gi|168771344|ref|ZP_02796351.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli O157:H7 str. EC4486]
gi|168776788|ref|ZP_02801795.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli O157:H7 str. EC4196]
gi|168783488|ref|ZP_02808495.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli O157:H7 str. EC4076]
gi|168790096|ref|ZP_02815103.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli O157:H7 str. EC869]
gi|195938877|ref|ZP_03084259.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli O157:H7 str. EC4024]
gi|208816224|ref|ZP_03257403.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli O157:H7 str. EC4045]
gi|208822137|ref|ZP_03262456.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli O157:H7 str. EC4042]
gi|209397376|ref|YP_002269963.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli O157:H7 str. EC4115]
gi|217328187|ref|ZP_03444269.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli O157:H7 str. TW14588]
gi|254792501|ref|YP_003077338.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli O157:H7 str. TW14359]
gi|261226978|ref|ZP_05941259.1| outer membrane-specific lipoprotein transporter subunit; membrane
component of ABC superfamily [Escherichia coli O157:H7
str. FRIK2000]
gi|261256212|ref|ZP_05948745.1| outer membrane-specific lipoprotein transporter subunit; membrane
component of ABC superfamily [Escherichia coli O157:H7
str. FRIK966]
gi|291282138|ref|YP_003498956.1| Lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli O55:H7 str. CB9615]
gi|12514668|gb|AAG55864.1|AE005321_7 putative kinase [Escherichia coli O157:H7 str. EDL933]
gi|13360960|dbj|BAB34919.1| putative kinase [Escherichia coli O157:H7 str. Sakai]
gi|187767879|gb|EDU31723.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli O157:H7 str. EC4196]
gi|188014635|gb|EDU52757.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli O157:H7 str. EC4113]
gi|188999144|gb|EDU68130.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli O157:H7 str. EC4076]
gi|189359880|gb|EDU78299.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli O157:H7 str. EC4486]
gi|189370362|gb|EDU88778.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli O157:H7 str. EC869]
gi|208732872|gb|EDZ81560.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli O157:H7 str. EC4045]
gi|208737622|gb|EDZ85305.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli O157:H7 str. EC4042]
gi|209158776|gb|ACI36209.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli O157:H7 str. EC4115]
gi|209772958|gb|ACI84791.1| putative kinase [Escherichia coli]
gi|209772960|gb|ACI84792.1| putative kinase [Escherichia coli]
gi|209772962|gb|ACI84793.1| putative kinase [Escherichia coli]
gi|209772964|gb|ACI84794.1| putative kinase [Escherichia coli]
gi|209772966|gb|ACI84795.1| putative kinase [Escherichia coli]
gi|217318614|gb|EEC27040.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli O157:H7 str. TW14588]
gi|254591901|gb|ACT71262.1| outer membrane-specific lipoprotein transporter subunit; membrane
component of ABC superfamily [Escherichia coli O157:H7
str. TW14359]
gi|290762011|gb|ADD55972.1| Lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli O55:H7 str. CB9615]
gi|320637570|gb|EFX07370.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli O157:H7 str. G5101]
gi|320643130|gb|EFX12331.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli O157:H- str. 493-89]
gi|320648588|gb|EFX17243.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli O157:H- str. H 2687]
gi|320653902|gb|EFX21976.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli O55:H7 str. 3256-97 TW 07815]
gi|320659383|gb|EFX26952.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli O55:H7 str. USDA 5905]
gi|320664518|gb|EFX31669.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli O157:H7 str. LSU-61]
Length = 414
Score = 116 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 105/269 (39%), Gaps = 3/269 (1%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R
Sbjct: 1 MAM--PLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNR 58
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+L + H I+ P ++Q + + +P + P+++ V + + V+G
Sbjct: 59 ILAVVPHGEIEAVDQPWTNWQEALDNVQKVPGIAAAAPYINFTGLVESG-ANLRAIQVKG 117
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
++ L S G+ +F G+ II + +
Sbjct: 118 VNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEH 177
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ + + D+ + L +AQ Y ++ ++VSGI + + D K
Sbjct: 178 KLMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKL 237
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|331652170|ref|ZP_08353189.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli M718]
gi|331050448|gb|EGI22506.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli M718]
Length = 414
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 55/269 (20%), Positives = 113/269 (42%), Gaps = 3/269 (1%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R
Sbjct: 1 MAM--PLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNR 58
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+L + H I+ P ++Q + + +P + P+++ V ++ + +
Sbjct: 59 ILAVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGV 118
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ N + +IIGK +A L + GD ++I+ P +
Sbjct: 119 NPQQEQHLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHK 178
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
M + + G+ + D+ + L +AQ Y ++ ++VSGI + + D K
Sbjct: 179 LMQPKRVRLHIAGILQ-LSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKL 237
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|56460622|ref|YP_155903.1| ABC-type transport system, involved in lipoprotein release,
permease [Idiomarina loihiensis L2TR]
gi|56179632|gb|AAV82354.1| ABC-type transport system, involved in lipoprotein release,
permease component [Idiomarina loihiensis L2TR]
Length = 411
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 61/265 (23%), Positives = 109/265 (41%), Gaps = 3/265 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ ++A R+ K F+S S S IG+ +G LI +S+MNGF + + +R+L +
Sbjct: 1 MQLAWLIARRFRKGTAKQGFLSFISASSTIGIALGCAVLIAALSMMNGFNQVLQERLLAV 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
V L D+Q +A P+VI P ++ V S G+ VRG+S
Sbjct: 61 VPQVEYSAVEGALEDWQEVAEIARQHPEVIAAAPGINSTVMVQ-TQSTFHGIQVRGVSAE 119
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + + G+++G LA L +++GD +++L+P G
Sbjct: 120 QEQNVSALSDYVSSEDWQRWQQEGGLLLGAGLADKLNLAVGDSVSLLTPEKSE--RGFRS 177
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + D Y+SLQ A+ + + VS + + +KD + I
Sbjct: 178 PERVRLEVTGLFKFGGQIDYQNAYVSLQTAKNELSFASDVSSVRLRLKDVFSAPAVAREI 237
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
L V + DW + + + E
Sbjct: 238 GNQLPELVYLDDWTRSHGHLYRDIE 262
>gi|256018626|ref|ZP_05432491.1| outer membrane-specific lipoprotein transporter subunit LolE
[Shigella sp. D9]
gi|332102046|gb|EGJ05392.1| outer membrane-specific lipoprotein transporter subunit LolE
[Shigella sp. D9]
Length = 414
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 50/269 (18%), Positives = 105/269 (39%), Gaps = 3/269 (1%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R
Sbjct: 1 MAM--PLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNR 58
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+L + H I+ P ++Q + + +P + P+++ V + + V+G
Sbjct: 59 ILAVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESG-ANLRAIQVKG 117
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
++ L S G+ +F G+ II + +
Sbjct: 118 VNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEH 177
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ + + D+ + + +AQ Y ++ ++VSGI + + D K
Sbjct: 178 KLMQPKRVRLHVAGILQLSGQLDHSFAMIPVADAQQYLDMGSSVSGIALKMTDVFNANKL 237
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|16129081|ref|NP_415636.1| lipoprotein-releasing system transmembrane protein [Escherichia
coli str. K-12 substr. MG1655]
gi|89107964|ref|AP_001744.1| outer membrane-specific lipoprotein transporter subunit
[Escherichia coli str. K-12 substr. W3110]
gi|157155645|ref|YP_001462351.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli E24377A]
gi|157160644|ref|YP_001457962.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli HS]
gi|170080769|ref|YP_001730089.1| outer membrane-specific lipoprotein ABC transporter membrane
protein [Escherichia coli str. K-12 substr. DH10B]
gi|188492451|ref|ZP_02999721.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli 53638]
gi|191168595|ref|ZP_03030379.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli B7A]
gi|193066278|ref|ZP_03047329.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli E22]
gi|194429793|ref|ZP_03062307.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli B171]
gi|209918374|ref|YP_002292458.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli SE11]
gi|238900372|ref|YP_002926168.1| outer membrane-specific lipoprotein transporter subunit
[Escherichia coli BW2952]
gi|256023184|ref|ZP_05437049.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia sp. 4_1_40B]
gi|260843358|ref|YP_003221136.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli O103:H2 str. 12009]
gi|260854601|ref|YP_003228492.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli O26:H11 str. 11368]
gi|260867480|ref|YP_003233882.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli O111:H- str. 11128]
gi|300917889|ref|ZP_07134522.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 115-1]
gi|300922647|ref|ZP_07138744.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 182-1]
gi|300948708|ref|ZP_07162785.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 116-1]
gi|300956216|ref|ZP_07168528.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 175-1]
gi|301328508|ref|ZP_07221574.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 78-1]
gi|301644534|ref|ZP_07244527.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 146-1]
gi|309796538|ref|ZP_07690945.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 145-7]
gi|312971256|ref|ZP_07785434.1| liporeleasing system, transmembrane protein LolE [Escherichia coli
1827-70]
gi|12230915|sp|P75958|LOLE_ECOLI RecName: Full=Lipoprotein-releasing system transmembrane protein
lolE
gi|1787362|gb|AAC74202.1| lipoprotein-releasing system transmembrane protein [Escherichia
coli str. K-12 substr. MG1655]
gi|4062690|dbj|BAA35938.1| outer membrane-specific lipoprotein transporter subunit
[Escherichia coli str. K12 substr. W3110]
gi|157066324|gb|ABV05579.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli HS]
gi|157077675|gb|ABV17383.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli E24377A]
gi|169888604|gb|ACB02311.1| outer membrane-specific lipoprotein transporter subunit; membrane
component of ABC superfamily [Escherichia coli str. K-12
substr. DH10B]
gi|188487650|gb|EDU62753.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli 53638]
gi|190901389|gb|EDV61154.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli B7A]
gi|192926050|gb|EDV80693.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli E22]
gi|194412140|gb|EDX28448.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli B171]
gi|209911633|dbj|BAG76707.1| putative ABC transporter permease component [Escherichia coli SE11]
gi|238861964|gb|ACR63962.1| outer membrane-specific lipoprotein transporter subunit
[Escherichia coli BW2952]
gi|257753250|dbj|BAI24752.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli O26:H11 str. 11368]
gi|257758505|dbj|BAI30002.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli O103:H2 str. 12009]
gi|257763836|dbj|BAI35331.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli O111:H- str. 11128]
gi|300316944|gb|EFJ66728.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 175-1]
gi|300414879|gb|EFJ98189.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 115-1]
gi|300420996|gb|EFK04307.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 182-1]
gi|300451802|gb|EFK15422.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 116-1]
gi|300845115|gb|EFK72875.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 78-1]
gi|301077116|gb|EFK91922.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 146-1]
gi|308119850|gb|EFO57112.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 145-7]
gi|309701389|emb|CBJ00690.1| lipoprotein-releasing system transmembrane protein [Escherichia
coli ETEC H10407]
gi|310336458|gb|EFQ01644.1| liporeleasing system, transmembrane protein LolE [Escherichia coli
1827-70]
gi|315135750|dbj|BAJ42909.1| outer membrane-specific lipoprotein transporter subunit
[Escherichia coli DH1]
gi|315618290|gb|EFU98880.1| liporeleasing system, transmembrane protein LolE [Escherichia coli
3431]
gi|323156755|gb|EFZ42891.1| liporeleasing system, transmembrane protein LolE [Escherichia coli
EPECa14]
gi|323163662|gb|EFZ49484.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli E128010]
gi|323175649|gb|EFZ61243.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli 1180]
gi|323185759|gb|EFZ71120.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli 1357]
gi|323937858|gb|EGB34122.1| lipoprotein releasing system [Escherichia coli E1520]
gi|323942588|gb|EGB38755.1| lipoprotein releasing system [Escherichia coli E482]
gi|323947578|gb|EGB43582.1| lipoprotein releasing system [Escherichia coli H120]
gi|324017512|gb|EGB86731.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 117-3]
gi|324117311|gb|EGC11218.1| lipoprotein releasing system [Escherichia coli E1167]
Length = 414
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 105/269 (39%), Gaps = 3/269 (1%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R
Sbjct: 1 MAM--PLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNR 58
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+L + H I+ P ++Q + + +P + P+++ V + + V+G
Sbjct: 59 ILAVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESG-ANLRAIQVKG 117
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
++ L S G+ +F G+ II + +
Sbjct: 118 VNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEH 177
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ + + D+ + L +AQ Y ++ ++VSGI + + D K
Sbjct: 178 KLMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKL 237
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|332174289|gb|AEE23543.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Glaciecola agarilytica 4H-3-7+YE-5]
Length = 403
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 64/270 (23%), Positives = 124/270 (45%), Gaps = 12/270 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RY S++ N FI+ + S IG+ +G+M+LI V+SVMNGF D+ R+L
Sbjct: 1 MFHSVSAFIGLRYAKSSKGNHFIAFINAFSAIGIALGLMSLITVLSVMNGFEGDLKDRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
GI HVV+ + + + I + L +P VI F+ + V S ++
Sbjct: 61 GIAPHVVVDTQG----ESEQIISSLSQLPGVIAASDFIESEGVVQSSRSLEGVMIQGIEP 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ + + G +++ G+I+G+ L+ L + +G++ ILS G V
Sbjct: 117 QTTDAHSIIAENMMMGQINDLTPGSYGIIVGRALSTRLDLRLGEQTRILSAQGSVFGPFG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGI---EVFVKDPDAIEK 239
+ S+ + + D+ ++ M++ ++ N VS I +F++DP +
Sbjct: 177 QMPSQRLFTVVGIYDVGSELDSKVILMNINDSAKLMR--NKVSRIAQTRLFLQDPFEYKS 234
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + G+ DW+ R F +
Sbjct: 235 VVDTLSEM---GLSSDDWRTRQGPLFDAVK 261
>gi|85059056|ref|YP_454758.1| outer membrane-specific lipoprotein transporter subunit LolE
[Sodalis glossinidius str. 'morsitans']
gi|84779576|dbj|BAE74353.1| lipoprotein releasing system transmembrane protein lolE [Sodalis
glossinidius str. 'morsitans']
Length = 414
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 54/270 (20%), Positives = 106/270 (39%), Gaps = 5/270 (1%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ + +A R+ R+ +S+ S IS IG+ +GV LI+ +S MNGF ++ R
Sbjct: 1 MTM--PLSLQIALRFSRGRRRGGMVSLISVISTIGIALGVAVLIIGLSAMNGFERELNNR 58
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+L + H I+ P D+Q + R++ +P ++ P+++ V + +
Sbjct: 59 ILAVVPHGEIEPVDPPFADWQGVLKRIEQVPGILAAAPYLNFTGLVERDDKLQAIQVKGV 118
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + + +I+GK +A L + GD + ++ P D +
Sbjct: 119 DLALEMRLSALPRYVQDNAWARFQAGQQQIIVGKGVADTLKVKPGDWLTVMIPNSDPQKL 178
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
R + + D+ + L +AQ Y V GI + V+D K
Sbjct: 179 LQPKRIR--LQVSGVLALNGQLDHSFAMVPLADAQRYLQRGEDVGGIAIKVRDVFNANKL 236
Query: 241 HENIVRILGNGV-VVIDWQQRYQIFFSCYE 269
+ + N + W Y + +
Sbjct: 237 VRDAGEEVTNAYVKIRSWIGTYGYMYRDIQ 266
>gi|50120755|ref|YP_049922.1| outer membrane-specific lipoprotein transporter subunit LolE
[Pectobacterium atrosepticum SCRI1043]
gi|49611281|emb|CAG74728.1| lipoprotein releasing system transmembrane protein [Pectobacterium
atrosepticum SCRI1043]
Length = 415
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 52/266 (19%), Positives = 107/266 (40%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F + + R+ R+ +S+ S IS +G+ +GV LI+ +S MNGF ++ R+L
Sbjct: 3 FPPLSLQIGLRFSRGRRRGGMVSLISVISTLGIALGVAVLILGLSAMNGFERELNNRILA 62
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ H I+ P +Q ++ +P V P+++ + + + +
Sbjct: 63 VVPHGEIEPVNQPFDGWQDFLPTIEQVPGVAAAAPYINFTGLLESGAKLQAIQVKGVDPQ 122
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + VIIG+ +A+ L ++ GD + ++ P D M
Sbjct: 123 QETHLSALPNYVLNDAWQRFRPGEQQVIIGQGVAKTLNVAQGDWVTVMIPNSDPEMKLMQ 182
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ V G+ + D+ + + L +AQ Y ++ +V+GI + D + K +
Sbjct: 183 PKRIRLHVSGILQ-LSGQLDHSLALIPLADAQQYLDMGQSVTGIAIKANDVFSANKLVRD 241
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ V + W Y + +
Sbjct: 242 AGKATNLYVHIRSWIGTYGYMYRDIQ 267
>gi|218553695|ref|YP_002386608.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli IAI1]
gi|300816820|ref|ZP_07097040.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 107-1]
gi|300821101|ref|ZP_07101250.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 119-7]
gi|331667518|ref|ZP_08368382.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli TA271]
gi|331676909|ref|ZP_08377605.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli H591]
gi|218360463|emb|CAQ98017.1| outer membrane-specific lipoprotein transporter subunit ; membrane
component of ABC superfamily [Escherichia coli IAI1]
gi|300526400|gb|EFK47469.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 119-7]
gi|300530594|gb|EFK51656.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 107-1]
gi|331065103|gb|EGI36998.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli TA271]
gi|331075598|gb|EGI46896.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli H591]
Length = 414
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 104/269 (38%), Gaps = 3/269 (1%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R
Sbjct: 1 MAM--PLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNR 58
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+L + H I+ P ++Q + + +P + P+++ V + V+G
Sbjct: 59 ILAVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESG-VNLRAIQVKG 117
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
++ L S G+ +F G+ II + +
Sbjct: 118 VNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEH 177
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ + + D+ + L +AQ Y ++ ++VSGI + + D K
Sbjct: 178 KLMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKL 237
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|190151392|ref|YP_001969917.1| lipoprotein-releasing system transmembrane protein [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|307262571|ref|ZP_07544202.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 13 str. N273]
gi|189916523|gb|ACE62775.1| lipoprotein-releasing system transmembrane protein [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|306872069|gb|EFN03782.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 13 str. N273]
Length = 416
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 47/265 (17%), Positives = 100/265 (37%), Gaps = 3/265 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY +KN +S+ S S G+ +GV LI+ +S MNGF ++ +RVL + H
Sbjct: 4 PFFISWRYQRGKQKNRLVSLISLFSSFGIALGVAVLIIGLSAMNGFERELNQRVLSVVPH 63
Query: 68 VVIQQKYYPLVDYQF---IANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ L + + + VRG+
Sbjct: 64 AELYSYNGNENAPIQAGKKLENLANSNPNVTASSPFVSFTGLIENGTQLKIAQVRGVDPV 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + F + G+I+G +A++L ++ GD++ +L P
Sbjct: 124 KQDKVSSLSHYIPSEQWQAFHQQGGLILGAGIAKDLEVTAGDEVTLLLPQPTEDGKLAQP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
S V G+ ++ + + + +L N SGI++ +K P +++
Sbjct: 184 LRFSLPVTGVLKLEGQLDHSYALLPIEKAQELLEYQPNEYSGIDLALKAPFKVQELQMPE 243
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + W +++ ++ +
Sbjct: 244 LANFNQPLYLNTWIEKFGYMYNDIQ 268
>gi|218700380|ref|YP_002408009.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli IAI39]
gi|218370366|emb|CAR18169.1| outer membrane-specific lipoprotein transporter subunit ; membrane
component of ABC superfamily [Escherichia coli IAI39]
Length = 414
Score = 115 bits (287), Expect = 7e-24, Method: Composition-based stats.
Identities = 54/269 (20%), Positives = 111/269 (41%), Gaps = 3/269 (1%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R
Sbjct: 1 MAM--PLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNR 58
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+L + H I+ P ++Q + + +P + P+++ V ++ + +
Sbjct: 59 ILAVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGV 118
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ N + +IIGK +A L + GD+++I+ P +
Sbjct: 119 NPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDRVSIMIPNSNPEHK 178
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
M + + D+ + L +AQ Y ++ ++VSGI + + D K
Sbjct: 179 LMQPKRVRLH-VAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKL 237
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|196233123|ref|ZP_03131970.1| protein of unknown function DUF214 [Chthoniobacter flavus Ellin428]
gi|196222767|gb|EDY17290.1| protein of unknown function DUF214 [Chthoniobacter flavus Ellin428]
Length = 460
Score = 115 bits (286), Expect = 7e-24, Method: Composition-based stats.
Identities = 60/282 (21%), Positives = 97/282 (34%), Gaps = 20/282 (7%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ F + +A RYL R F+S+ + IS +GV++GVM LIVV+SVM GF + K +LG
Sbjct: 32 APFSLFLALRYLRPKR--TFVSVITVISVLGVILGVMVLIVVISVMTGFERTLQKAILGF 89
Query: 65 NGH-VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
H V + IP ++ V P+V G V +L
Sbjct: 90 EPHLRVTNGEIMRNWREVMGKIDNGKIPGLVAVAPYVQGPVLVEHEGRVNPAILRGIDVE 149
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL------------ 171
++ + G + DL N+G I
Sbjct: 150 AEEKLIDLKKFVIGTVDMPLDSVIVGKELAMDLGANIGDEITIYAPGNIHGILQEIQRES 209
Query: 172 -----SPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSG 226
P G + ++G+ D+ + + L AQ + L++ V G
Sbjct: 210 DDPNAKPKTLAELKGDVVFPAPMKIVGLINSGRNSVDSSTLLVPLTNAQALYELKDGVHG 269
Query: 227 IEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ V +P + T I + L W + F
Sbjct: 270 LSVNTTNPYDVRTTKRLIDQALDGKAFTTSWFDENRERFEAI 311
>gi|237706896|ref|ZP_04537377.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia sp. 3_2_53FAA]
gi|226898106|gb|EEH84365.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia sp. 3_2_53FAA]
Length = 414
Score = 115 bits (286), Expect = 7e-24, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 104/267 (38%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L
Sbjct: 1 MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ P ++Q + + +P + P+++ V + + V+G++
Sbjct: 61 AVVPHGEIEAVDQPWTNWQEALDNVQKVPGIAAAAPYINFTGLVESG-ANLRAIQVKGVN 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
L S G+ +F G+ II + + +
Sbjct: 120 PQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKL 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + L +AQ Y ++ ++VSGI + + D K
Sbjct: 180 MQPKRVRLHIAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ ++ + V + W Y + +
Sbjct: 240 DAGEVINSYVYIKSWIGTYGYMYRDIQ 266
>gi|227327000|ref|ZP_03831024.1| outer membrane-specific lipoprotein transporter subunit LolE
[Pectobacterium carotovorum subsp. carotovorum WPP14]
Length = 415
Score = 115 bits (286), Expect = 7e-24, Method: Composition-based stats.
Identities = 55/269 (20%), Positives = 110/269 (40%), Gaps = 2/269 (0%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M F +++ R+ R+ +S+ S IS +G+ +GV LI+ +S MNGF ++ R
Sbjct: 1 MR-FPPLSLLIGLRFSRGRRRGGMVSLISVISTLGIALGVAVLILGLSAMNGFERELNNR 59
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+L + H I P +Q I +++ +P V P+++ + + + +
Sbjct: 60 ILAVVPHGEIAPVNQPFDGWQDILPKIEQVPGVAAAAPYINFTGLLENGAKLQAVQVKGV 119
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + VIIG+ +A+ L + GD + ++ P D
Sbjct: 120 DPQQEKRLSALPNYVLNDAWQRFRAGEQQVIIGQGVAKALNVVEGDWVTVMIPNSDPEMK 179
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
M + V G+ + D+G+ + L +AQ Y ++ +V+GI + D + K
Sbjct: 180 LMQPKRIRLHVSGILQ-LSGQLDHGLALIPLADAQQYLDMGQSVTGIAIKANDVFSANKL 238
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + V + W Y + +
Sbjct: 239 VRDAGEVTNAYVTIRSWIGTYGYMYRDIQ 267
>gi|82777269|ref|YP_403618.1| outer membrane-specific lipoprotein transporter subunit LolE
[Shigella dysenteriae Sd197]
gi|309788190|ref|ZP_07682796.1| liporeleasing system, transmembrane protein LolE [Shigella
dysenteriae 1617]
gi|81241417|gb|ABB62127.1| putative kinase [Shigella dysenteriae Sd197]
gi|308924042|gb|EFP69543.1| liporeleasing system, transmembrane protein LolE [Shigella
dysenteriae 1617]
Length = 414
Score = 115 bits (286), Expect = 7e-24, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 105/269 (39%), Gaps = 3/269 (1%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R
Sbjct: 1 MAM--PLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNR 58
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+L + H I+ P ++Q + + +P + P+++ V + + V+G
Sbjct: 59 ILAVVPHGEIEAVDQPWTNWQEALDNVQKVPGIAAAAPYINFTGLVESG-ANLRAIQVKG 117
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
++ L S G+ +F G+ II + +
Sbjct: 118 VNPQQEQRLSALSSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEH 177
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ + + D+ + L +AQ Y ++ ++VSGI + + D K
Sbjct: 178 KLMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKL 237
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|255011428|ref|ZP_05283554.1| hypothetical protein Bfra3_19955 [Bacteroides fragilis 3_1_12]
gi|313149244|ref|ZP_07811437.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313138011|gb|EFR55371.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 412
Score = 115 bits (286), Expect = 7e-24, Method: Composition-based stats.
Identities = 54/273 (19%), Positives = 100/273 (36%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+A RYLFS +K+ I+I S IS GV + MA++ +SV NGF++ +
Sbjct: 1 MNLPFYIARRYLFSKKKHNAINIISAISVCGVALATMAMVCTLSVFNGFQDTVADLFTVF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + + + D Q + + VL + + + +++G+ ++
Sbjct: 61 DPELKVTIAEGKVFDAQDPRIQAIRQMPEVDVLTETLEENAMVQYKDRQTMAVIKGVQDN 120
Query: 125 DFSYLQNSFSRFYGNVSNDFD---RGKGVIIGKDLARNLGISIGDKINILSPYGDV---- 177
+ D + I GI D + + P +
Sbjct: 121 FEQLTAIDSILYGAGEFLLNDSVVDYGVMGIELVSTLGTGIRFVDPLQVYIPKRNGKVNL 180
Query: 178 -TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
P Y+ +F + YD + SL A+ + VS IE+ +K
Sbjct: 181 ANPAASFNMDYLYSPGVVFVVNQQKYDGQYILTSLDFARRLLDYTTEVSAIELKLKPGSN 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
I E I + LG+G V+ + ++ + F E
Sbjct: 241 ISVVKEKIGKALGDGFVIRNRYEQQEDVFRIME 273
>gi|170726168|ref|YP_001760194.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Shewanella woodyi ATCC 51908]
gi|169811515|gb|ACA86099.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Shewanella woodyi ATCC 51908]
Length = 418
Score = 115 bits (286), Expect = 7e-24, Method: Composition-based stats.
Identities = 54/270 (20%), Positives = 105/270 (38%), Gaps = 3/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + V WR+ + + N+ IS SF S G+ +GV LIVV+S MNGF ++ R+L
Sbjct: 1 MNPFLSIWVGWRFYMARQSNSLISFISFASTAGIALGVAVLIVVLSAMNGFESELENRML 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H + P+ ++ I +P ++ PF+ Q V ++ +
Sbjct: 61 GVVSHGELSGVNQPVNNWPAIVEDAKKVPGIVASAPFIRLQGLVQKPGGFQGLTILGVDT 120
Query: 123 NSDFSYLQN-SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ F +++G+ LA++LG+++GD +++ P + P
Sbjct: 121 QYEQKVSNIAQFMPAETWEKLAETDKNNIVLGRGLAKSLGLNLGDSLSMYMPNVNADPTV 180
Query: 182 MGIRSKSYT--VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
I S + + D Y+ +Q A + VSGI + +
Sbjct: 181 KRIGSAKSYRFTVAGIFELGGELDLSTAYVPMQYAASILAMGEQVSGIRIKADKVFEAPR 240
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + DW + + +
Sbjct: 241 LIRELGFSQDQYLYITDWTRTQGHLYQDIQ 270
>gi|300938689|ref|ZP_07153413.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 21-1]
gi|300456334|gb|EFK19827.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 21-1]
Length = 414
Score = 115 bits (286), Expect = 8e-24, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 106/269 (39%), Gaps = 3/269 (1%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R
Sbjct: 1 MAM--PLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNR 58
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+L + H I+ P ++Q +++ +P + P+++ V + + V+G
Sbjct: 59 ILAVVPHGEIEAVDQPWTNWQEALDKVQKVPGIAAAAPYINFTGLVESG-ANLRAIQVKG 117
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
++ L S G+ +F G+ II + +
Sbjct: 118 VNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEH 177
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ + + D+ + L +AQ Y ++ ++VSGI + + D K
Sbjct: 178 KLMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKL 237
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|126642648|ref|YP_001085632.1| transport protein of outer membrane lipoproteins [Acinetobacter
baumannii ATCC 17978]
gi|126388532|gb|ABO13030.1| transport protein of outer membrane lipoproteins [Acinetobacter
baumannii ATCC 17978]
Length = 254
Score = 115 bits (286), Expect = 8e-24, Method: Composition-based stats.
Identities = 55/237 (23%), Positives = 110/237 (46%), Gaps = 2/237 (0%)
Query: 33 FIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPD 92
+G+ +GV LI V+SVMNGF ++ RVLG+ + L D+ + R++ P
Sbjct: 1 MVGLTLGVAVLITVLSVMNGFDRELKNRVLGMVPQATVSS-TQILTDWPELVKRVENHPH 59
Query: 93 VIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVII 152
V V PF Q ++ ++ + + G++ + G+++
Sbjct: 60 VTGVAPFTQLQGMLTAQGQVAGIMVTGIDPKYEKNVSIIQNHIVAGSLDSLKKGEFGIVL 119
Query: 153 GKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQ 212
GKD+A +LG+ + D + ++ P +P G+ R K + V+G+F + D+ + Y++L
Sbjct: 120 GKDMADSLGLRLNDSVTLVLPEATPSPAGVVPRFKRFKVVGIF-SVGAEVDSMVGYIALY 178
Query: 213 EAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+A L + G+ + + D A + ++IV+ L + +W + F+ +
Sbjct: 179 DASTLLRLPDGAQGVRLKLDDIFAAPQVADDIVKNLPSNFYATNWTYTHGNLFNAIQ 235
>gi|323190470|gb|EFZ75744.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli RN587/1]
Length = 414
Score = 115 bits (286), Expect = 8e-24, Method: Composition-based stats.
Identities = 54/267 (20%), Positives = 111/267 (41%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L
Sbjct: 1 MVMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ P ++Q + + +P + P+++ V ++ + +
Sbjct: 61 AVVPHGEIEAVDQPWTNWQEALDNVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ N + +IIGK +A L + GD ++I+ P + M
Sbjct: 121 QQEQRLSALPSFVQGDAWHNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + G+ + D+ + L +AQ Y ++ ++VSGI + + D K
Sbjct: 181 QPKRVRLHIAGILQ-LSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|187732240|ref|YP_001880712.1| outer membrane-specific lipoprotein transporter subunit LolE
[Shigella boydii CDC 3083-94]
gi|187429232|gb|ACD08506.1| lipoprotein releasing system, transmembrane protein LolE [Shigella
boydii CDC 3083-94]
Length = 414
Score = 115 bits (286), Expect = 8e-24, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 106/269 (39%), Gaps = 3/269 (1%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R
Sbjct: 1 MAM--PLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNR 58
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+L + H I+ P ++Q +++ +P + P+++ V + + V+G
Sbjct: 59 ILAVLPHGEIEAVNQPWTNWQEALDKVQKVPGIAAAAPYINFTGLVESG-ANLRAIQVKG 117
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
++ L S G+ +F G+ II + +
Sbjct: 118 VNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEH 177
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ + + D+ + L +AQ Y ++ ++VSGI + + D K
Sbjct: 178 KLMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKL 237
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 238 VRDAGEMTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|330997440|ref|ZP_08321291.1| efflux ABC transporter, permease protein [Paraprevotella
xylaniphila YIT 11841]
gi|329570814|gb|EGG52530.1| efflux ABC transporter, permease protein [Paraprevotella
xylaniphila YIT 11841]
Length = 409
Score = 115 bits (286), Expect = 8e-24, Method: Composition-based stats.
Identities = 58/273 (21%), Positives = 103/273 (37%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RYLFS + + I+I S IS GV + MAL+ MSV NGF++ + I
Sbjct: 1 MNFPFYIARRYLFSKKSHHAINIISAISVCGVALATMALVCTMSVFNGFQDLVASFFTAI 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + + + IK+ + + V ++G+ ++
Sbjct: 61 DPQLKVTPSQGKTMAADDPRLTALKTYPGIKIYTETLEDHALVICGDHQAMVTIKGVDDN 120
Query: 125 DFSYLQNSFSRFYGNVSNDF-----DRGKGVIIGKDLARNLGISIGDKINILSPYGD--- 176
+ + G+ + L K+
Sbjct: 121 FAQMADLNKLLYGDGTFTLHADVLEFGVLGIQLAAQLGLGASFDTPLKVYAPQKGERVNL 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
P +S+ Y+ +F ++ YD G + SL+ A+ F + VS IE+ ++D
Sbjct: 181 SNPTESFTQSELYSPGVVFAVKQAKYDAGYILTSLRFARDLFGQQRRVSAIELQLQDGVD 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
I + +I +ILGNG V D ++ + F E
Sbjct: 241 IRQAQADIQKILGNGFTVKDRYEQQEDVFRIME 273
>gi|227357771|ref|ZP_03842120.1| lipoprotein-releasing system transmembrane protein [Proteus
mirabilis ATCC 29906]
gi|227162100|gb|EEI47114.1| lipoprotein-releasing system transmembrane protein [Proteus
mirabilis ATCC 29906]
Length = 415
Score = 115 bits (286), Expect = 8e-24, Method: Composition-based stats.
Identities = 58/264 (21%), Positives = 107/264 (40%), Gaps = 1/264 (0%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
++ A R+ ++ +S+ S IS +G+M+GV LI+ +S MNGF ++ R+L +
Sbjct: 5 PLALVTALRFSKGRKRAGMVSLISIISTLGIMLGVAVLIIGLSAMNGFERELKNRILSVV 64
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
H I P + +Q +R++ V+ P++ + + + ++ N
Sbjct: 65 PHGQIYSVEQPFISWQPALSRIENTEGVVAAAPYILLTGLLEKGTELKAVQVMGVEPNKQ 124
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ + +IIG+ +A L I GD + IL P D + +
Sbjct: 125 SDISLLPSYVQNNAWQHFQAGQQQIIIGQGVADALKIKQGDWLTILIPNNDDPKKLLQPK 184
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
V G+F+ D+ + + L +AQ Y + ++GIEV DP + N
Sbjct: 185 RIRLQVSGIFK-LSGMLDHQLALIPLADAQQYLDYGKGITGIEVKTSDPFLANEIIHNAG 243
Query: 246 RILGNGVVVIDWQQRYQIFFSCYE 269
V W Y +S +
Sbjct: 244 LNSQAYVYAKSWISDYGYMYSDIQ 267
>gi|315287486|gb|EFU46897.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 110-3]
gi|323957944|gb|EGB53656.1| lipoprotein releasing system [Escherichia coli H263]
Length = 414
Score = 115 bits (286), Expect = 8e-24, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 104/267 (38%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L
Sbjct: 1 MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ P ++Q + + +P + P+++ V + + V+G++
Sbjct: 61 AVVPHGEIEAVDQPWTNWQEALDNVQKVPGIAAAAPYINFTGLVESG-ANLRAIQVKGVN 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
L S G+ +F G+ II + + +
Sbjct: 120 PQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKL 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + L +AQ Y ++ ++VSGI + + D K
Sbjct: 180 MQPKRVRLHIAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ ++ + V + W Y + +
Sbjct: 240 DAGEVINSYVYIKSWIGTYGYMYRDIQ 266
>gi|226952097|ref|ZP_03822561.1| outer membrane lipoprotein ABC transporter membrane protein
[Acinetobacter sp. ATCC 27244]
gi|294651092|ref|ZP_06728428.1| lipoprotein ABC superfamily ATP binding cassette transporter,
membrane protein [Acinetobacter haemolyticus ATCC 19194]
gi|226837153|gb|EEH69536.1| outer membrane lipoprotein ABC transporter membrane protein
[Acinetobacter sp. ATCC 27244]
gi|292822986|gb|EFF81853.1| lipoprotein ABC superfamily ATP binding cassette transporter,
membrane protein [Acinetobacter haemolyticus ATCC 19194]
Length = 381
Score = 115 bits (286), Expect = 9e-24, Method: Composition-based stats.
Identities = 55/237 (23%), Positives = 105/237 (44%), Gaps = 2/237 (0%)
Query: 33 FIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPD 92
IG+ +GV LI V+SVMNGF ++ RVLG+ + L D+ +A +++ P
Sbjct: 1 MIGLTLGVAVLITVLSVMNGFDRELKTRVLGMVPQATVSS-TQILTDWPELAKKVESHPH 59
Query: 93 VIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVII 152
V V PF Q ++ ++ + G+++ G+++
Sbjct: 60 VTGVAPFTQLQGMLTAHGQVAGIMVTGIEPEYEKQVSIIQNHMVTGDLNALQKGEFGIVL 119
Query: 153 GKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQ 212
GKD+ LG+ + D + ++ P +P G+ R K + ++G+F + D+ + Y++L
Sbjct: 120 GKDMTDALGLGLNDNVTLVLPEATPSPAGVVPRFKRFKIVGIF-SVGAEVDSMVGYIALN 178
Query: 213 EAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+A L + GI + + + A K IV L + +W + F+ +
Sbjct: 179 DASTLLRLPDGAQGIRLKLDNIFAAPKVANEIVSELPSNFYASNWTYTHGNLFNAIQ 235
>gi|197284765|ref|YP_002150637.1| outer membrane-specific lipoprotein transporter subunit LolE
[Proteus mirabilis HI4320]
gi|194682252|emb|CAR41983.1| lipoprotein-releasing system transmembrane protein [Proteus
mirabilis HI4320]
Length = 415
Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats.
Identities = 58/264 (21%), Positives = 107/264 (40%), Gaps = 1/264 (0%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
++ A R+ ++ +S+ S IS +G+M+GV LI+ +S MNGF ++ R+L +
Sbjct: 5 PLALVTALRFSKGRKRAGMVSLISIISTLGIMLGVAVLIIGLSAMNGFERELKNRILSVV 64
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
H I P + +Q +R++ V+ P++ + + + ++ N
Sbjct: 65 PHGQIYSVEQPFISWQPALSRIENTEGVVAAAPYILLTGLLEKGTELKAVQVMGVEPNKQ 124
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ + +IIG+ +A L I GD + IL P D + +
Sbjct: 125 SDISLLPSYVQNNAWQHFQAGQQQIIIGQGVADALKIKQGDWLTILIPNNDDPKKLLQPK 184
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
V G+F+ D+ + + L +AQ Y + ++GIEV DP + N
Sbjct: 185 RIRLQVSGIFK-LSGMLDHQLALIPLADAQQYLDYGKGITGIEVKTSDPFLANEIIHNAG 243
Query: 246 RILGNGVVVIDWQQRYQIFFSCYE 269
V W Y +S +
Sbjct: 244 LNSQAYVYAKSWISDYGYMYSDIQ 267
>gi|331682624|ref|ZP_08383243.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli H299]
gi|331080255|gb|EGI51434.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli H299]
Length = 414
Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 105/269 (39%), Gaps = 3/269 (1%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R
Sbjct: 1 MAM--PLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNR 58
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+L + H I+ P ++Q + + +P + P+++ V + + V+G
Sbjct: 59 ILAVVPHGEIEAVDQPWTNWQEALDNVQKVPGIAAAAPYINFTGLVESG-ANLRAIQVKG 117
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
++ L S G+ +F G+ II + +
Sbjct: 118 VNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEH 177
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ + + D+ + L +AQ Y ++ ++VSGI + + D K
Sbjct: 178 KLMQPKRVRLHIAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKL 237
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|163782902|ref|ZP_02177898.1| hypothetical protein HG1285_16241 [Hydrogenivirga sp. 128-5-R1-1]
gi|159882023|gb|EDP75531.1| hypothetical protein HG1285_16241 [Hydrogenivirga sp. 128-5-R1-1]
Length = 395
Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats.
Identities = 57/266 (21%), Positives = 112/266 (42%), Gaps = 12/266 (4%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ +A RYL S + + + +FISF GV + V A+++ + V GF++ + +++L
Sbjct: 1 MSLTLRIALRYLLSVKGSTLL--ITFISFFGVFLSVGAILLTLGVFTGFQDSLKEKILST 58
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
HV++ L I ++ + V S+
Sbjct: 59 APHVIVSVVGDAD---------LKEIRKDVERVKGVKETLPFILYSAILGKEERLQPVTV 109
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ KG+++GK +A LG+S GD ++ P G TP G
Sbjct: 110 KAVDFGEKAFKRLVGSHLVKGDLKGLVVGKGIADVLGVSAGDTAVLVFPMGIRTPTGFIP 169
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+++ + G+F D D +V+M +EA+ +F G+E++++DP ++ E I
Sbjct: 170 KTREVVIGGVFHTGAYDRDFVIVFMERREAKRFFRRGFKFEGLEIYLEDPYRAQEVKERI 229
Query: 245 VRILGNGVV-VIDWQQRYQIFFSCYE 269
+ + N ++ V W + F+ +
Sbjct: 230 EKAVNNELILVRSWIDLNKPLFNALQ 255
>gi|170682380|ref|YP_001744060.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli SMS-3-5]
gi|170520098|gb|ACB18276.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli SMS-3-5]
Length = 414
Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 105/269 (39%), Gaps = 3/269 (1%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R
Sbjct: 1 MAM--PLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNR 58
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+L + H I+ P ++Q + + +P + P+++ V + + V+G
Sbjct: 59 ILAVVPHGEIEAVDQPWTNWQEALDNVQKVPGIAAAAPYINFTGLVESG-ANLRAIQVKG 117
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
++ L S G+ +F G+ II + +
Sbjct: 118 VNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEH 177
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ + + D+ + L +AQ Y ++ ++VSGI + + D K
Sbjct: 178 KLMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKL 237
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|306814032|ref|ZP_07448205.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli NC101]
gi|331672633|ref|ZP_08373422.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli TA280]
gi|305852669|gb|EFM53117.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli NC101]
gi|331070276|gb|EGI41642.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli TA280]
Length = 414
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 106/269 (39%), Gaps = 3/269 (1%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R
Sbjct: 1 MAM--PLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNR 58
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+L + H I+ P ++Q +++ +P + P+++ V + + V+G
Sbjct: 59 ILAVVPHGEIEAVDQPWTNWQEALDKVQKVPGIAAAAPYINFTGLVESG-ANLRAIQVKG 117
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
++ L S G+ +F G+ II + +
Sbjct: 118 VNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEH 177
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ + + D+ + L +AQ Y ++ ++VSGI + + D K
Sbjct: 178 KLMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKL 237
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|194433671|ref|ZP_03065947.1| lipoprotein releasing system, transmembrane protein LolE [Shigella
dysenteriae 1012]
gi|194418100|gb|EDX34193.1| lipoprotein releasing system, transmembrane protein LolE [Shigella
dysenteriae 1012]
gi|320179180|gb|EFW54138.1| Lipoprotein releasing system transmembrane protein LolE [Shigella
boydii ATCC 9905]
Length = 414
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 103/267 (38%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L
Sbjct: 1 MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ P ++Q + + +P + P+++ V + + V+G++
Sbjct: 61 AVVPHGEIEAVNQPWTNWQEALDNVQKVPGIAAAAPYINFTGLVESG-ANLRAIQVKGVN 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
L S G+ +F G+ II + + +
Sbjct: 120 PQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKL 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + L +AQ Y ++ ++VSGI + + D K
Sbjct: 180 MQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|218689070|ref|YP_002397282.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli ED1a]
gi|218426634|emb|CAR07462.1| outer membrane-specific lipoprotein transporter subunit ; membrane
component of ABC superfamily [Escherichia coli ED1a]
Length = 414
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 55/269 (20%), Positives = 113/269 (42%), Gaps = 3/269 (1%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R
Sbjct: 1 MAM--PLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNR 58
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+L + H I+ P ++Q + + +P + P+++ V ++ + +
Sbjct: 59 ILAVVPHGEIEAVDQPWTNWQEALDNVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGV 118
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ N + +IIGK +A L + GD ++I+ P +
Sbjct: 119 NPQQEQRLSALPSFVQGDAWHNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHK 178
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
M + + G+ + D+ + L +AQ Y ++ ++VSGI + + D K
Sbjct: 179 LMQPKRVRLHIAGILQ-LSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKL 237
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|74311679|ref|YP_310098.1| outer membrane-specific lipoprotein transporter subunit LolE
[Shigella sonnei Ss046]
gi|73855156|gb|AAZ87863.1| putative kinase [Shigella sonnei Ss046]
gi|323165628|gb|EFZ51415.1| liporeleasing system, transmembrane protein LolE [Shigella sonnei
53G]
Length = 414
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 105/269 (39%), Gaps = 3/269 (1%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R
Sbjct: 1 MAM--PLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNR 58
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+L + H I+ P ++Q + + +P + P+++ V + + V+G
Sbjct: 59 ILAVVPHGEIEAVNQPWTNWQEALDNVQKVPGIAAAAPYINFTGLVESG-TNLRAIQVKG 117
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
++ L S G+ +F G+ II + +
Sbjct: 118 VNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEH 177
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ + + D+ + L +AQ Y ++ ++VSGI + + D K
Sbjct: 178 KLMQPKRVRLHIAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKL 237
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|293409484|ref|ZP_06653060.1| lipoprotein releasing system [Escherichia coli B354]
gi|291469952|gb|EFF12436.1| lipoprotein releasing system [Escherichia coli B354]
Length = 414
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 52/269 (19%), Positives = 107/269 (39%), Gaps = 3/269 (1%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R
Sbjct: 1 MAM--PLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNR 58
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+L + H I+ P ++Q +++ +P + P+++ V + + V+G
Sbjct: 59 ILAVVPHGEIEAVNQPWTNWQEALDKVQKVPGIAAAAPYINFTGLVESG-ANLRAIQVKG 117
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
++ L S G+ N+F G+ II + +
Sbjct: 118 VNPQQEQRLSALPSFVQGDAWNNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEH 177
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ + + D+ + L +AQ Y ++ ++VSGI + + D K
Sbjct: 178 KLMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKL 237
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|324005966|gb|EGB75185.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 57-2]
Length = 414
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 105/269 (39%), Gaps = 3/269 (1%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R
Sbjct: 1 MAM--PLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNR 58
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+L + H I+ P ++Q + + +P + P+++ V + + V+G
Sbjct: 59 ILAVVPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESG-ANLRAIQVKG 117
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
++ L S G+ +F G+ II + +
Sbjct: 118 VNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEH 177
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ + + D+ + L +AQ Y ++ ++VSGI + + D K
Sbjct: 178 KLMQPKRVRLHIAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKL 237
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|299137494|ref|ZP_07030676.1| protein of unknown function DUF214 [Acidobacterium sp. MP5ACTX8]
gi|298600899|gb|EFI57055.1| protein of unknown function DUF214 [Acidobacterium sp. MP5ACTX8]
Length = 413
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 65/273 (23%), Positives = 129/273 (47%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
RFE+ +A RYL + R+ A + + IS IGV GV +LIV +++ NG R D+ +R++G
Sbjct: 1 MRFELFIAARYLRARRRQAVVGFITVISIIGVAAGVASLIVALAITNGMRRDLQERLVGS 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
HV++ + + ++ + + + G L++GI +
Sbjct: 61 TAHVMLMRTAGDGIHNWRPLMAQLAQMPHVQAVAPGLFGQVLISRGAHSGGALIKGIIPA 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRG--------KGVIIGKDLARNLGISIGDKINILSPYGD 176
D + + + + + ++IG DLA LG ++GD + + SP G+
Sbjct: 121 DELKVGDLLQSIKQGSAAELEPTATAGNELAPPIVIGNDLAETLGATVGDALLVTSPQGE 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
+TP+G+ R + + V+G+F F YD+ +M L ++Q F+ + +S + + D
Sbjct: 181 LTPLGLVPRYQRFRVVGIFASGFYQYDSSYAFMRLSDSQRLFSEPDLISAMSFRIDDLYR 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ + + + G G V +W ++ + F +
Sbjct: 241 AQEVGQTLEQAAGPGFQVTNWMEQNRELFRALK 273
>gi|193070936|ref|ZP_03051867.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli E110019]
gi|192955790|gb|EDV86262.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli E110019]
Length = 414
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 105/269 (39%), Gaps = 3/269 (1%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R
Sbjct: 1 MAM--PLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNR 58
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+L + H I+ P ++Q + + +P + P+++ V + + V+G
Sbjct: 59 ILAVVPHGEIEAVNQPWTNWQEALDNVQKVPGIAAAAPYINFTGLVESG-ANLRAIQVKG 117
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
++ L S G+ +F G+ II + +
Sbjct: 118 VNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEH 177
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ + + D+ + L +AQ Y ++ ++VSGI + + D K
Sbjct: 178 KLMQPKRVRLHIAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKL 237
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|255689942|ref|ZP_05413617.1| putative membrane protein [Bacteroides finegoldii DSM 17565]
gi|260624548|gb|EEX47419.1| putative membrane protein [Bacteroides finegoldii DSM 17565]
Length = 408
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 54/273 (19%), Positives = 101/273 (36%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RYLFS +K+ I+I S IS GV + +AL+ +SV NGF++ +
Sbjct: 1 MNFPFYIARRYLFSKKKHNAINIISGISVCGVALATLALVCTLSVFNGFQDMVASFFTAF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + I + + D Q + + + V + + + V+++G+ ++
Sbjct: 61 DPQLKITVREGKVFDGQDKRIGVVCLLPEVDVFTETLEENAMVQYKDRQAMVVLKGVEDN 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVII---GKDLARNLGISIGDKINILSPYGD----- 176
+ D + G+ D + + P +
Sbjct: 121 FEELTAIDSILYGAGDFLLHDSIVNYGVMGGELVATLGTGLQFVDPLQVYLPKRNAKVNM 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
P R Y+ +F + +YD + SL + + VS IE+ +K
Sbjct: 181 ANPGASFNRDYLYSPGVVFVVNQQEYDGKYILTSLDFLRQLLDYTTEVSAIELKLKPGAN 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I +ILGN +V + Q+ F E
Sbjct: 241 VSSVQAKIEKILGNDFIVQNRYQQQADVFRIME 273
>gi|82544414|ref|YP_408361.1| outer membrane-specific lipoprotein transporter subunit LolE
[Shigella boydii Sb227]
gi|81245825|gb|ABB66533.1| putative kinase [Shigella boydii Sb227]
Length = 414
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 104/267 (38%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L
Sbjct: 1 MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ P ++Q +++ +P + P+++ V + + V+G++
Sbjct: 61 AVVPHGEIEAVNQPWTNWQEALDKVQKVPGIAAAAPYINFTGLVESG-ANLRAIQVKGVN 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
L S G+ +F G+ II + + +
Sbjct: 120 PQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKL 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + L +AQ Y ++ ++VSGI + + D K
Sbjct: 180 MQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 240 DAGEMTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|215486329|ref|YP_002328760.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli O127:H6 str. E2348/69]
gi|215264401|emb|CAS08758.1| outer membrane-specific lipoprotein transporter subunit LolE,
membrane component of ABC superfamily [Escherichia coli
O127:H6 str. E2348/69]
Length = 414
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 54/267 (20%), Positives = 111/267 (41%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L
Sbjct: 1 MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ P ++Q + + +P + P+++ V ++ + +
Sbjct: 61 AVVPHGEIEAVDQPWTNWQEALDNVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ N + +IIGK +A L + GD ++I+ P + M
Sbjct: 121 QQEQRLSALPSFVQGDAWHNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + G+ + D+ + L +AQ Y ++ ++VSGI + + D K
Sbjct: 181 QPKRVRLHIAGILQ-LSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|148980818|ref|ZP_01816228.1| putative ABC transporter integral membrane subunit [Vibrionales
bacterium SWAT-3]
gi|145961053|gb|EDK26374.1| putative ABC transporter integral membrane subunit [Vibrionales
bacterium SWAT-3]
Length = 396
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 64/260 (24%), Positives = 110/260 (42%), Gaps = 7/260 (2%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
V RYL + F S++S G+ IGV++LI V+SVMNGF + R+LG+ V
Sbjct: 2 FVGLRYLKGRSGDRFSRFVSYMSTAGITIGVLSLITVLSVMNGFEAQLKDRILGVLPQAV 61
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ ++ + + I V P V +A + + +G+L+ NSD
Sbjct: 62 VYEQGGKTLLSEQAPGFAKQISLNGHVEPIVRSEAVIQSPAQLSAGLLIGIQPNSDD--- 118
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM-GMGIRSKS 188
G +S+ + +G LARNL +S+GDK+ ++ G ++
Sbjct: 119 PLQDHLIAGRLSSLKAGQYQLFLGHTLARNLKVSMGDKVRLMVTSASQYTPLGRIPSQRN 178
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+TV G+F MV +L + +SG +F +DP + + + L
Sbjct: 179 FTVAGIFNTGSDIDAQLMVTDIQDAGRLMRYKSDTISGWRLFFEDPFEVAELS---SQPL 235
Query: 249 GNGVVVIDWQQRYQIFFSCY 268
+G + DW+ + F
Sbjct: 236 PDGWLWSDWRDQRGELFQAV 255
>gi|109898047|ref|YP_661302.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudoalteromonas atlantica T6c]
gi|109700328|gb|ABG40248.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Pseudoalteromonas atlantica T6c]
Length = 403
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 63/270 (23%), Positives = 122/270 (45%), Gaps = 12/270 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + RY S++ N FI+ + S IG+ +G+M+LI V+SVMNGF D+ R+L
Sbjct: 1 MFHSVSAFIGLRYAKSSKGNQFIAFINAFSAIGIALGLMSLITVLSVMNGFEGDLKDRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
GI H+V+ + + + I + L +P V F+ + V S ++
Sbjct: 61 GIAPHIVVDTQG----ENEQIISSLSKLPGVTATSDFIESEGVVQSSRSLEGVMIQGVEP 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + + G +++ G+I+G+ L+ LG+ +G++ ILS G V
Sbjct: 117 QTTHEHSIIAKNMLVGQIADLTPGSYGIIVGRALSTRLGLRVGEQTRILSAQGSVFGPFG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGI---EVFVKDPDAIEK 239
+ S+ + + D ++ M++ ++ N VS I +F++DP +
Sbjct: 177 QMPSQRLFTVVGVFDVGSELDAKVILMNINDSAKLMR--NKVSRIAQTRLFLQDPFEYKT 234
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + G+ DW+ R F +
Sbjct: 235 VVDKVTEV---GLKSDDWRTRQGPLFDAVK 261
>gi|119505778|ref|ZP_01627846.1| ABC-type transport system, involved in lipoprotein release,
permease component [marine gamma proteobacterium
HTCC2080]
gi|119458412|gb|EAW39519.1| ABC-type transport system, involved in lipoprotein release,
permease component [marine gamma proteobacterium
HTCC2080]
Length = 413
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 67/264 (25%), Positives = 115/264 (43%), Gaps = 10/264 (3%)
Query: 14 RYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQK 73
RY F+ R+ F + S S +G+++GV +LI V+SVMNGF ++ R+L + H V+
Sbjct: 4 RYTFTGRREGFARLVSRASMLGMILGVASLITVLSVMNGFALELRDRILSLVPHAVVSSP 63
Query: 74 YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSF 133
PL +Q +A+ L +P V V PF+ A + S + +
Sbjct: 64 GNPLTQWQQLASELQAVPSVQSVAPFIEDIALLQSRSRRVGSQVTGIDLKAQRGVSDLHE 123
Query: 134 SRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLG 193
G++ + + +G LA LG GD I ++ P VTP+G+ R + V+
Sbjct: 124 RILSGDLGLLQSQPFTIALGSTLAGQLGAMAGDVIEVVLPTLSVTPLGVFPRVRKLVVVA 183
Query: 194 MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL----- 248
F + Y+SL+ A F V G+++ + PD + + +L
Sbjct: 184 EFEVGSSIDAVQS-YVSLETAGRLFARRG-VDGLQIDLGSPDNVADAAPPLREMLRMTTA 241
Query: 249 ---GNGVVVIDWQQRYQIFFSCYE 269
+ +V+ DW+ FS +
Sbjct: 242 VSSPSDLVITDWRDSQGSLFSAVK 265
>gi|26247262|ref|NP_753302.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli CFT073]
gi|227886525|ref|ZP_04004330.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli 83972]
gi|300974590|ref|ZP_07172651.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 45-1]
gi|301051093|ref|ZP_07197927.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 185-1]
gi|26107663|gb|AAN79862.1|AE016759_136 Lipoprotein releasing system transmembrane protein lolE
[Escherichia coli CFT073]
gi|222032871|emb|CAP75610.1| Lipoprotein-releasing system transmembrane protein lolE
[Escherichia coli LF82]
gi|227836729|gb|EEJ47195.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli 83972]
gi|300297265|gb|EFJ53650.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 185-1]
gi|300410532|gb|EFJ94070.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 45-1]
gi|307553119|gb|ADN45894.1| lipoprotein releasing system [Escherichia coli ABU 83972]
gi|312945680|gb|ADR26507.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli O83:H1 str. NRG 857C]
gi|315291018|gb|EFU50383.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 153-1]
Length = 414
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 105/269 (39%), Gaps = 3/269 (1%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R
Sbjct: 1 MAM--PLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNR 58
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+L + H I+ P ++Q + + +P + P+++ V + + V+G
Sbjct: 59 ILAVVPHGEIEAVDQPWTNWQEALDNVQKVPGIAAAAPYINFTGLVESG-ANLRAIQVKG 117
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
++ L S G+ +F G+ II + +
Sbjct: 118 VNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEH 177
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ + + D+ + L +AQ Y ++ ++VSGI + + D K
Sbjct: 178 KLMQPKRVRLHIAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKL 237
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|254362302|ref|ZP_04978414.1| possible lipoprotein ABC superfamily ATP binding cassette
transporter, membrane protein [Mannheimia haemolytica
PHL213]
gi|153093882|gb|EDN74810.1| possible lipoprotein ABC superfamily ATP binding cassette
transporter, membrane protein [Mannheimia haemolytica
PHL213]
Length = 390
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 46/267 (17%), Positives = 104/267 (38%), Gaps = 13/267 (4%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ +A+RY S + F + + ++ +G+++GVMAL++V+SVMNG +L
Sbjct: 1 MNLTPFFIAFRYFRSKSADRFGRLVTNLASLGIVLGVMALVIVLSVMNGLENMQKTNLLS 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
H +I + + +A L V+ + S + G + V ++
Sbjct: 61 TLPHAIITPQEGHFAKGEKLA--LPEFAKQSVVINRANVIIQSSQGINAGQLIGVENATD 118
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+N + V+IG LA L +++GDK+ ++
Sbjct: 119 DPLLVAENIPALLPSGEFK-------VVIGSRLANKLNVTVGDKLRLMITENSQYTPLGR 171
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHE 242
+ + + + ++ +L + + E+ V G+ ++++DP + + +
Sbjct: 172 VPVQRLFEISGVYQSNREASEFTLFANLADVGRLLRISEDQVQGVRLYLQDPFQVTELSQ 231
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ DW+++ FF +
Sbjct: 232 YFDA---ERYQISDWREQKGEFFQAVK 255
>gi|253688852|ref|YP_003018042.1| lipoprotein releasing system, transmembrane protein LolE
[Pectobacterium carotovorum subsp. carotovorum PC1]
gi|251755430|gb|ACT13506.1| lipoprotein releasing system, transmembrane protein LolE
[Pectobacterium carotovorum subsp. carotovorum PC1]
Length = 415
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 53/266 (19%), Positives = 111/266 (41%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F +++ R+ R+ +S+ S IS +G+ +GV LI+ +S MNGF ++ R+L
Sbjct: 3 FPPLSLLIGLRFSRGRRRGGMVSLISVISTLGIALGVAVLILGLSAMNGFERELNNRILA 62
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ H I P +Q I +++ +P V P+++ + + + +
Sbjct: 63 VVPHGEIAPVNQPFDGWQDILPKIEQVPGVAAAAPYINFTGLLENGAKLQAVQVKGVDPQ 122
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + VIIG+ +A+ L ++ GD + ++ P D M
Sbjct: 123 QEKRLSALPNYVLNDAWQRFHAGEQQVIIGQGVAKALNVAQGDWVTVMIPNSDPEMKLMQ 182
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ + G+ + D+G+ + L +AQ Y ++ +V+GI + D + K +
Sbjct: 183 PKRIRLHISGILQ-LSGQLDHGLALIPLADAQQYLDMGQSVTGIAIKANDVFSANKLVRD 241
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + V + W Y + +
Sbjct: 242 AGLVTKSYVTIRSWIGTYGYMYRDIQ 267
>gi|331662529|ref|ZP_08363452.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli TA143]
gi|331060951|gb|EGI32915.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli TA143]
Length = 414
Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 105/269 (39%), Gaps = 3/269 (1%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R
Sbjct: 1 MAM--PLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNR 58
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+L + H I+ P ++Q + + +P + P+++ V + + V+G
Sbjct: 59 ILAVVPHGEIEAVDQPWTNWQEALDNVQKVPGIAAAAPYINFTGLVESG-ANLRAIQVKG 117
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
++ L S G+ +F G+ II + +
Sbjct: 118 VNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEH 177
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ + + D+ + L +AQ Y ++ ++VSGI + + D K
Sbjct: 178 KLMQPKRVRLHIAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKL 237
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|24112523|ref|NP_707033.1| outer membrane-specific lipoprotein transporter subunit LolE
[Shigella flexneri 2a str. 301]
gi|30062651|ref|NP_836822.1| outer membrane-specific lipoprotein transporter subunit LolE
[Shigella flexneri 2a str. 2457T]
gi|110805132|ref|YP_688652.1| outer membrane-specific lipoprotein transporter subunit LolE
[Shigella flexneri 5 str. 8401]
gi|24051415|gb|AAN42740.1| putative kinase [Shigella flexneri 2a str. 301]
gi|30040899|gb|AAP16629.1| putative kinase [Shigella flexneri 2a str. 2457T]
gi|110614680|gb|ABF03347.1| putative kinase [Shigella flexneri 5 str. 8401]
Length = 414
Score = 114 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 103/267 (38%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L
Sbjct: 1 MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ P ++Q + + +P + P+++ V + + V+G++
Sbjct: 61 AVVPHGEIEAVNQPWTNWQEALDNVQKVPGIAAAAPYINFTGLVESG-ANLRAIQVKGVN 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
L S G+ +F G+ II + + +
Sbjct: 120 PQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKL 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + L +AQ Y ++ ++VSGI + + D K
Sbjct: 180 MQPKRVRLHIAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|312968803|ref|ZP_07783010.1| liporeleasing system, transmembrane protein LolE [Escherichia coli
2362-75]
gi|312286205|gb|EFR14118.1| liporeleasing system, transmembrane protein LolE [Escherichia coli
2362-75]
Length = 414
Score = 114 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 54/267 (20%), Positives = 111/267 (41%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L
Sbjct: 1 MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ P ++Q + + +P + P+++ V ++ + +
Sbjct: 61 AVVPHGEIEAVDQPWTNWQEALDNVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ N + +IIGK +A L + GD ++I+ P + M
Sbjct: 121 QQEQRLSALPSFVQGDAWHNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + G+ + D+ + L +AQ Y ++ ++VSGI + + D K
Sbjct: 181 QPKRVRLHIAGILQ-LSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|261493245|ref|ZP_05989772.1| putative lipoprotein ABC superfamily ATP binding cassette
transporter, membrane protein [Mannheimia haemolytica
serotype A2 str. BOVINE]
gi|261496512|ref|ZP_05992892.1| putative lipoprotein ABC superfamily ATP binding cassette
transporter, membrane protein [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261307715|gb|EEY09038.1| putative lipoprotein ABC superfamily ATP binding cassette
transporter, membrane protein [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261311095|gb|EEY12271.1| putative lipoprotein ABC superfamily ATP binding cassette
transporter, membrane protein [Mannheimia haemolytica
serotype A2 str. BOVINE]
Length = 390
Score = 114 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 46/267 (17%), Positives = 104/267 (38%), Gaps = 13/267 (4%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ +A+RY S + F + + ++ +G+++GVMAL++V+SVMNG +L
Sbjct: 1 MNLTPFFIAFRYFRSKSADRFGRLVTNLASLGIVLGVMALVIVLSVMNGLENMQKTNLLS 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
H +I + + +A L V+ + S + G + V ++
Sbjct: 61 TLPHAIITPQEGHFAKGEKLA--LPEFAKQSVVINRANVIIQSSQGINAGQLIGVENATD 118
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+N + V+IG LA L +++GDK+ ++
Sbjct: 119 DPLLVAENIPALLPSGEFK-------VVIGSRLANKLNVTVGDKLRLMITENSQYTPLGR 171
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHE 242
+ + + + ++ +L + + E+ V G+ ++++DP + + +
Sbjct: 172 VPVQRLFEISGVYQSNREASEFTLFANLADVGRLLRISEDQVQGVRLYLQDPFQVTELSQ 231
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ DW+++ FF +
Sbjct: 232 YFDA---ERYQISDWREQKGEFFQAVK 255
>gi|91210273|ref|YP_540259.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli UTI89]
gi|117623303|ref|YP_852216.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli APEC O1]
gi|218557999|ref|YP_002390912.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli S88]
gi|218704529|ref|YP_002412048.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli UMN026]
gi|293404407|ref|ZP_06648401.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli FVEC1412]
gi|298380184|ref|ZP_06989789.1| lipoprotein-releasing system permease [Escherichia coli FVEC1302]
gi|300896881|ref|ZP_07115371.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 198-1]
gi|301023329|ref|ZP_07187122.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 69-1]
gi|331646376|ref|ZP_08347479.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli M605]
gi|331657182|ref|ZP_08358144.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli TA206]
gi|91071847|gb|ABE06728.1| lipoprotein releasing system transmembrane protein lolE
[Escherichia coli UTI89]
gi|115512427|gb|ABJ00502.1| ABC transporter integral membrane subunit [Escherichia coli APEC
O1]
gi|218364768|emb|CAR02458.1| outer membrane-specific lipoprotein transporter subunit ; membrane
component of ABC superfamily [Escherichia coli S88]
gi|218431626|emb|CAR12505.1| outer membrane-specific lipoprotein transporter subunit ; membrane
component of ABC superfamily [Escherichia coli UMN026]
gi|284920943|emb|CBG34006.1| lipoprotein-releasing system transmembrane protein [Escherichia
coli 042]
gi|291428993|gb|EFF02018.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli FVEC1412]
gi|294493799|gb|ADE92555.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli IHE3034]
gi|298279882|gb|EFI21390.1| lipoprotein-releasing system permease [Escherichia coli FVEC1302]
gi|300359288|gb|EFJ75158.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 198-1]
gi|300397054|gb|EFJ80592.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 69-1]
gi|307627411|gb|ADN71715.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli UM146]
gi|315296623|gb|EFU55918.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 16-3]
gi|323953195|gb|EGB49061.1| lipoprotein releasing system [Escherichia coli H252]
gi|331045128|gb|EGI17255.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli M605]
gi|331055430|gb|EGI27439.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli TA206]
Length = 414
Score = 114 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 103/267 (38%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L
Sbjct: 1 MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ P ++Q + + +P + P+++ V + + V+G++
Sbjct: 61 AVVPHGEIEAVDQPWTNWQEALDNVQKVPGIAAAAPYINFTGLVESG-ANLRAIQVKGVN 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
L S G+ +F G+ II + + +
Sbjct: 120 PQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKL 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + L +AQ Y ++ ++VSGI + + D K
Sbjct: 180 MQPKRVRLHIAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|194439717|ref|ZP_03071786.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli 101-1]
gi|254161224|ref|YP_003044332.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli B str. REL606]
gi|300928327|ref|ZP_07143862.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 187-1]
gi|194421336|gb|EDX37354.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli 101-1]
gi|242376920|emb|CAQ31639.1| lolE, subunit of LolCDE ABC lipoprotein transporter [Escherichia
coli BL21(DE3)]
gi|253973125|gb|ACT38796.1| outer membrane-specific lipoprotein transporter subunit
[Escherichia coli B str. REL606]
gi|253977339|gb|ACT43009.1| outer membrane-specific lipoprotein transporter subunit
[Escherichia coli BL21(DE3)]
gi|300463659|gb|EFK27152.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 187-1]
gi|323962717|gb|EGB58295.1| lipoprotein releasing system [Escherichia coli H489]
gi|323973292|gb|EGB68481.1| lipoprotein releasing system [Escherichia coli TA007]
Length = 414
Score = 114 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 54/267 (20%), Positives = 111/267 (41%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L
Sbjct: 1 MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ P ++Q + + +P + P+++ V ++ + +
Sbjct: 61 AVVPHGEIEAVNQPWTNWQEALDNVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ N + +IIGK +A L + GD ++I+ P + M
Sbjct: 121 QQEQHLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + G+ + D+ + L +AQ Y ++ ++VSGI + + D K
Sbjct: 181 QPKRVRLHIAGILQ-LSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|189402496|ref|ZP_02782840.2| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli O157:H7 str. EC4401]
gi|189405965|ref|ZP_02825497.2| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli O157:H7 str. EC508]
gi|293414411|ref|ZP_06657060.1| lipoprotein releasing system [Escherichia coli B185]
gi|189355214|gb|EDU73633.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli O157:H7 str. EC4401]
gi|189377286|gb|EDU95702.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli O157:H7 str. EC508]
gi|291434469|gb|EFF07442.1| lipoprotein releasing system [Escherichia coli B185]
gi|320188125|gb|EFW62790.1| Lipoprotein releasing system transmembrane protein LolE
[Escherichia coli O157:H7 str. EC1212]
gi|326339341|gb|EGD63155.1| Lipoprotein releasing system transmembrane protein LolE
[Escherichia coli O157:H7 str. 1125]
gi|326340422|gb|EGD64225.1| Lipoprotein releasing system transmembrane protein LolE
[Escherichia coli O157:H7 str. 1044]
Length = 412
Score = 114 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 50/265 (18%), Positives = 102/265 (38%), Gaps = 1/265 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L +
Sbjct: 1 MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H I+ P ++Q + + +P + P+++ V + + V+G++
Sbjct: 61 VPHGEIEAVDQPWTNWQEALDNVQKVPGIAAAAPYINFTGLVESG-ANLRAIQVKGVNPQ 119
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
L S G+ +F G+ II + + +
Sbjct: 120 QEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQ 179
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + D+ + L +AQ Y ++ ++VSGI + + D K +
Sbjct: 180 PKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDA 239
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ + V + W Y + +
Sbjct: 240 GEVTNSYVYIKSWIGTYGYMYRDIQ 264
>gi|29348247|ref|NP_811750.1| hypothetical protein BT_2838 [Bacteroides thetaiotaomicron
VPI-5482]
gi|29340150|gb|AAO77944.1| putative lipoprotein releasing system transmembrane permease
[Bacteroides thetaiotaomicron VPI-5482]
Length = 408
Score = 114 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 56/273 (20%), Positives = 103/273 (37%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RYLFS +K+ I+I S IS GV + +AL+ +SV NGF++ +
Sbjct: 1 MNFPFYIARRYLFSKKKHNAINIISGISVCGVALATLALVCTLSVFNGFQDMVASFFTAF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + I + + D Q R + V + + + V+++G+ ++
Sbjct: 61 DPQLKITIREGKVFDGQDERIRAVCALPEVSVSTETLEENAMVQYKDRQAMVVLKGVEDN 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKG---VIIGKDLARNLGISIGDKINILSPYGD----- 176
+ + D + + G++ D + + P +
Sbjct: 121 FEDLTEIDNILYGAGEFILHDSIVNYGVMGVELVSTLGTGLAFVDPLQVYLPKRNAKVNM 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
P R Y+ +F + YD + SL + + VSGIE+ +K
Sbjct: 181 ANPGASFNRDYLYSPGVVFVVNQQKYDESYILTSLDFLRNLLDYTTEVSGIELKLKPNTN 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
I I ++LG+ VV + Q+ F E
Sbjct: 241 ISSVQSKIEKMLGDDFVVQNRYQQQADVFRIME 273
>gi|218548648|ref|YP_002382439.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia fergusonii ATCC 35469]
gi|218356189|emb|CAQ88806.1| outer membrane-specific lipoprotein transporter subunit ; membrane
component of ABC superfamily [Escherichia fergusonii
ATCC 35469]
gi|281178228|dbj|BAI54558.1| putative ABC transporter permease component [Escherichia coli SE15]
gi|323967059|gb|EGB62485.1| lipoprotein releasing system [Escherichia coli M863]
gi|323976509|gb|EGB71597.1| lipoprotein releasing system [Escherichia coli TW10509]
gi|324113531|gb|EGC07506.1| lipoprotein releasing system [Escherichia fergusonii B253]
gi|325497059|gb|EGC94918.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia fergusonii ECD227]
gi|327253517|gb|EGE65155.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli STEC_7v]
Length = 414
Score = 114 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 55/269 (20%), Positives = 111/269 (41%), Gaps = 3/269 (1%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R
Sbjct: 1 MAM--PLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNR 58
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+L + H I+ P ++Q + + +P + P+++ V ++ + +
Sbjct: 59 ILAVVPHGEIEAVDQPWTNWQEALDNVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGV 118
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ SN + +IIGK +A L + GD ++I+ P +
Sbjct: 119 NPQQEQRLSALPSFVQDDAWSNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHK 178
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
M + + D+ + L +AQ Y ++ ++VSGI + + D K
Sbjct: 179 LMQPKRVRLH-VAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKL 237
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|218694651|ref|YP_002402318.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli 55989]
gi|300902512|ref|ZP_07120492.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 84-1]
gi|301305643|ref|ZP_07211732.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 124-1]
gi|218351383|emb|CAU97089.1| outer membrane-specific lipoprotein transporter subunit ; membrane
component of ABC superfamily [Escherichia coli 55989]
gi|300405413|gb|EFJ88951.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 84-1]
gi|300839071|gb|EFK66831.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 124-1]
gi|315253018|gb|EFU32986.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 85-1]
Length = 414
Score = 114 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 103/267 (38%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L
Sbjct: 1 MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ P ++Q + + +P + P+++ V + + V+G++
Sbjct: 61 AVVPHGEIEAVNQPWTNWQEALDNVQKVPGIAAAAPYINFTGLVESG-ANLRAIQVKGVN 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
L S G+ +F G+ II + + +
Sbjct: 120 PQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKL 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + L +AQ Y ++ ++VSGI + + D K
Sbjct: 180 MQPKRVRLHIAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|227111705|ref|ZP_03825361.1| outer membrane-specific lipoprotein transporter subunit LolE
[Pectobacterium carotovorum subsp. brasiliensis PBR1692]
Length = 415
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 55/269 (20%), Positives = 110/269 (40%), Gaps = 2/269 (0%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M F +++ R+ R+ +S+ S IS +G+ +GV LI+ +S MNGF ++ R
Sbjct: 1 MR-FPPLSLLIGLRFSRGRRRGGMVSLISVISTLGIALGVAVLILGLSAMNGFERELNNR 59
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+L + H I P +Q I +++ +P V P+++ + + + +
Sbjct: 60 ILAVVPHGEIAPVNQPFDGWQDILPKIEQVPGVAAAAPYINFTGLLENGAKLQAVQVKGV 119
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + VIIG+ +A+ L + GD + ++ P D
Sbjct: 120 DPQQEKRLSALPNYVLNNAWQRFRAGEQQVIIGQGVAKALNVVEGDWVTVMIPNSDPEMK 179
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
M + V G+ + D+G+ + L +AQ Y ++ +V+GI + D + K
Sbjct: 180 LMQPKRIRLHVSGILQ-LSGQLDHGLALIPLADAQQYLDMGLSVTGIAIKANDVFSANKL 238
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + V + W Y + +
Sbjct: 239 VRDAGEVTKAYVTIRSWIGTYGYMYRDIQ 267
>gi|153003985|ref|YP_001378310.1| hypothetical protein Anae109_1118 [Anaeromyxobacter sp. Fw109-5]
gi|152027558|gb|ABS25326.1| protein of unknown function DUF214 [Anaeromyxobacter sp. Fw109-5]
Length = 661
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 63/283 (22%), Positives = 118/283 (41%), Gaps = 28/283 (9%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
LF + + + IS GV IGV AL VV+SVM+GF D+ +++LG N H ++
Sbjct: 241 LFVRPRMPATLLMTLISIGGVAIGVWALTVVLSVMSGFEADLKQKILGQNAHGMLLTYGQ 300
Query: 76 PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSR 135
+ + + ++ + + +G +V+GI + +
Sbjct: 301 DELTDWRATRQRVLVVPGVEGATPILYNEVMLSAGQNLTGAIVKGIDVASVGTVTELPRS 360
Query: 136 FYGNVSNDFDRGKGVIIG---------------------------KDLARNLGISIGDKI 168
++ + + ++LAR L + +GD++
Sbjct: 361 IEEGKLEWLEQPGRIPLPGRDERAAEGEGRPPARAGKTLPGIVVGRELARALRVFVGDQV 420
Query: 169 NILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIE 228
N++SP+GD+ P G +S+ + V +F +YD+ Y+ L E Q +F ++++ E
Sbjct: 421 NVVSPFGDLGPAGPQPKSRPFRVAAIFHSGMFEYDSKFAYVDLAEGQRFFGTGDSITAFE 480
Query: 229 VFVKDPDAIEKTHENIVRILGN-GVVVIDWQQRYQIFFSCYES 270
+ V DPDA +V LG DW + + FS ++
Sbjct: 481 LKVHDPDAARAVMGRVVFELGGWPYRARDWTELNRSLFSALQT 523
>gi|170020487|ref|YP_001725441.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli ATCC 8739]
gi|301029575|ref|ZP_07192653.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 196-1]
gi|307310105|ref|ZP_07589755.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli W]
gi|169755415|gb|ACA78114.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli ATCC 8739]
gi|260449743|gb|ACX40165.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli DH1]
gi|299877570|gb|EFI85781.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 196-1]
gi|306909823|gb|EFN40317.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Escherichia coli W]
gi|315060395|gb|ADT74722.1| outer membrane-specific lipoprotein transporter subunit
[Escherichia coli W]
gi|320201013|gb|EFW75597.1| Lipoprotein releasing system transmembrane protein LolE
[Escherichia coli EC4100B]
gi|323175275|gb|EFZ60888.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli LT-68]
gi|323379045|gb|ADX51313.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli KO11]
Length = 412
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 50/265 (18%), Positives = 102/265 (38%), Gaps = 1/265 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L +
Sbjct: 1 MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H I+ P ++Q + + +P + P+++ V + + V+G++
Sbjct: 61 VPHGEIEAVDQPWTNWQEALDHVQKVPGIAAAAPYINFTGLVESG-ANLRAIQVKGVNPQ 119
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
L S G+ +F G+ II + + +
Sbjct: 120 QEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQ 179
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + D+ + L +AQ Y ++ ++VSGI + + D K +
Sbjct: 180 PKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDA 239
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ + V + W Y + +
Sbjct: 240 GEVTNSYVYIKSWIGTYGYMYRDIQ 264
>gi|301156082|emb|CBW15553.1| outer membrane-specific lipoprotein transporter subunit
[Haemophilus parainfluenzae T3T1]
Length = 416
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 55/269 (20%), Positives = 114/269 (42%), Gaps = 5/269 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
++WRY +KN +++ S S IG+ +GV LIV +S MNGF ++ R+L +
Sbjct: 1 MSTPFFISWRYQRGKQKNPLVALISKFSAIGIALGVAVLIVGLSAMNGFERELNSRILAV 60
Query: 65 NGHVVIQQKYYPL----VDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
H I + +Q +A RL + + PFVS A V + V V+G
Sbjct: 61 VPHTEIMVNPHANEATLNHWQNLAERLKTNKKITALSPFVSFTALVENG-NKLKVVQVKG 119
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + + G+ F G+++G +A+ L + GD +++L +
Sbjct: 120 VDKQAEDQVSSLGQFVEGDGWQKFAEEGGLVLGSGIAKELDVKAGDWVSLLISQPNGEDQ 179
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ V + R+ + + Q +L E+ ++G+E+ + DP +++
Sbjct: 180 MAQPNRERVQVTAILRLDGQLDHSYALLALPQAQELMGYREDQITGVELKIDDPFKVQEM 239
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+++ + + +W ++ + +
Sbjct: 240 DYSMLNDYPQLLYIQNWVAKFGYMYRDIQ 268
>gi|167041422|gb|ABZ06174.1| putative Predicted permease [uncultured marine microorganism
HF4000_006O13]
Length = 396
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 66/245 (26%), Positives = 109/245 (44%)
Query: 25 ISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIA 84
+S S S +G+ IGV ++ VMSVMNGF+ ++ R+LGI H I L + +
Sbjct: 3 MSFISMFSVLGIAIGVAVIVTVMSVMNGFQSEVKNRMLGILPHAKIMGLGGSLENRDALQ 62
Query: 85 NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDF 144
L DV FVS +A + G S + G + +
Sbjct: 63 AALIANKDVKSFSAFVSSEALLLGSKEVSGIQFKGIDPKESGSAQKLEGLMVQGQLDSMS 122
Query: 145 DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDN 204
+ +++GK LA +L +S+GD + ++ P ++ MG+ R K +TV G F ++D
Sbjct: 123 NGSFNIVLGKGLADDLNLSLGDPVTVMIPNSLISAMGVIPRLKRFTVSGFFEAGVYEFDR 182
Query: 205 GMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIF 264
+ + +L +AQ + +SG+E+ DP + I G G + DW + F
Sbjct: 183 NLAFANLLDAQTLLQMPGKISGMEIDFFDPKQSREMVRKIAIGSGGGYTITDWTVQNPNF 242
Query: 265 FSCYE 269
F E
Sbjct: 243 FRSLE 247
>gi|320175626|gb|EFW50718.1| Lipoprotein releasing system transmembrane protein LolE [Shigella
dysenteriae CDC 74-1112]
gi|320184245|gb|EFW59059.1| Lipoprotein releasing system transmembrane protein LolE [Shigella
flexneri CDC 796-83]
gi|332094395|gb|EGI99444.1| lipoprotein releasing system, transmembrane protein LolE [Shigella
boydii 3594-74]
Length = 412
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 50/265 (18%), Positives = 103/265 (38%), Gaps = 1/265 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L +
Sbjct: 1 MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H I+ P ++Q +++ +P + P+++ V + + V+G++
Sbjct: 61 VPHGEIEAVNQPWTNWQEALDKVQKVPGIAAAAPYINFTGLVESG-ANLRAIQVKGVNPQ 119
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
L S G+ +F G+ II + + +
Sbjct: 120 QEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQ 179
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + D+ + L +AQ Y ++ ++VSGI + + D K +
Sbjct: 180 PKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDA 239
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ + V + W Y + +
Sbjct: 240 GEMTNSYVYIKSWIGTYGYMYRDIQ 264
>gi|15602425|ref|NP_245497.1| hypothetical protein PM0560 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12720826|gb|AAK02644.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 396
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 52/267 (19%), Positives = 104/267 (38%), Gaps = 9/267 (3%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +A RY + + F + + ++ IG+++GVMALI+V+SVMNG + K VL
Sbjct: 1 MKFSVPLFIALRYWRAKSADRFGRLVTNLASIGIVLGVMALIIVLSVMNGLEQHQKKHVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H ++ + + P V K +P Q + + +G ++
Sbjct: 61 ANIPHAIVMPVTQRITLTDE---MIALPPFVQKAVPINQTQVILQTATGVSAGQVIGVQQ 117
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
++D L + S + ++IG LA+ L + IGDK+ ++
Sbjct: 118 SADDPLLMDMLSPDF--EQILPPGAFNLVIGAQLAQKLQLHIGDKVRLMMTENSQYTPFG 175
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
+ + + + + V+ L + + G +F++DP I +
Sbjct: 176 RVPVQRLFTVSDIYYSGDEASSYEVFAHLSDIGRLMRIQPELAQGYRLFLQDPFQITELP 235
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + DW+Q+ FF
Sbjct: 236 QYFAE---QSWQLYDWRQQKGEFFQAV 259
>gi|90417519|ref|ZP_01225441.1| hypothetical protein GB2207_03202 [marine gamma proteobacterium
HTCC2207]
gi|90330672|gb|EAS45956.1| hypothetical protein GB2207_03202 [marine gamma proteobacterium
HTCC2207]
Length = 405
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 48/268 (17%), Positives = 99/268 (36%), Gaps = 12/268 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRK-NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
++ + + RY S N +S S ++ G+++GV LIVV+SVMNGF ++ +R+
Sbjct: 1 MYKPLPLFIGLRYFSSGGGGNRLVSFISLLAISGLVLGVCLLIVVLSVMNGFDRELRERI 60
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
L + H V + D++ A + P V +V P+ V + L+
Sbjct: 61 LSVVPH-VQVIHQQGVADWRTDAGLIARQPSVTEVTPYAEVNGMVHFRQTSRPIQLLGLE 119
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+++ LQ ++ ++ + L I +G ++ ++ P + +
Sbjct: 120 ADAVPLGLQAVLDEAGVSLPQGNQLLVSEVVAESL----NIQLGQRLTLIVPSAEGPTVA 175
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ D + +L + V+G V + D +
Sbjct: 176 QAFTLAGVFATHT------EIDQLLAIGALPVVADVAGISGLVNGFRVQIDDQFNARQLG 229
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ L G DW Q + + +
Sbjct: 230 YRMLEELPFGYGFRDWFQTHGNLYQAIQ 257
>gi|294788969|ref|ZP_06754209.1| lipoprotein-releasing system transmembrane protein LolC
[Simonsiella muelleri ATCC 29453]
gi|294483071|gb|EFG30758.1| lipoprotein-releasing system transmembrane protein LolC
[Simonsiella muelleri ATCC 29453]
Length = 415
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 69/265 (26%), Positives = 124/265 (46%), Gaps = 2/265 (0%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
E + RYL + +++ F+S S IS +G+ +GV+ LI+V+SV+NGF++++ ++L I
Sbjct: 3 LETWIGLRYLRAKKRSGFMSFISMISMVGITLGVVVLILVLSVVNGFQKEIRGQLLNIAP 62
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
H I D +L + + S G +RGI
Sbjct: 63 HAEIGYIQTEENDTWQNLQKLVVDKKGVISTAPYVAGQALLASSGEVRGAQIRGILPDME 122
Query: 127 SYLQNSFSRFYGNVSND-FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ + + ++ ND D G+I+G LA ++G G KI I++P G+VTP G+ R
Sbjct: 123 TKVVDYGNKMVSGSFNDLKDDEFGIILGSGLAESIGAEKGGKITIITPEGNVTPAGVVPR 182
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
K + V+G+ + + D+ + L +AQ + L N + + + DP IV
Sbjct: 183 LKQFNVVGIVKTGVDEADSSLAITHLADAQKLYRLGNEGVALRLRLADPQNAPAFMSEIV 242
Query: 246 -RILGNGVVVIDWQQRYQIFFSCYE 269
+ L + + V +W + +F+ E
Sbjct: 243 PKDLLDKIWVRNWTDNNRSYFNAVE 267
>gi|254785844|ref|YP_003073273.1| lipoprotein releasing system, transmembrane protein, LolC
[Teredinibacter turnerae T7901]
gi|237684251|gb|ACR11515.1| lipoprotein releasing system, transmembrane protein, LolC
[Teredinibacter turnerae T7901]
Length = 409
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 52/265 (19%), Positives = 109/265 (41%), Gaps = 4/265 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
RF V +RY + R++ +S S +S G+M+GV L+ V+S+MNGF +M R+LG+
Sbjct: 1 MRFSFFVGFRYAGAKRRSQLVSFLSGMSVAGLMVGVGLLVAVLSIMNGFDREMRDRILGL 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + + D++ + L + V PFV S ++ +L S
Sbjct: 61 VPQAAV-FERDGIEDWRAVMKTLMKDSRIAGVAPFVQVDGLASYRNNTAPVLLYGIDPAS 119
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + + +++ + +++G LA LG+ G ++ ++ P
Sbjct: 120 ETNVSRILEYVDEQSLAALDASSENLLLGASLAEKLGVEQGSRLMVVIPDS---HGTTSA 176
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+Y + + DN + SL + V+G+ + + + + +T
Sbjct: 177 PHIAYFKVSALIKSNTELDNTLALASLASVATLTGNPSTVTGVRLRLHNIFSAPQTVYEN 236
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ LG G +W + + + +
Sbjct: 237 LVKLGPGYYGTNWTRTHGNLYQAIQ 261
>gi|325578180|ref|ZP_08148315.1| lipoprotein ABC superfamily ATP binding cassette transporter,
permease protein [Haemophilus parainfluenzae ATCC 33392]
gi|325159916|gb|EGC72045.1| lipoprotein ABC superfamily ATP binding cassette transporter,
permease protein [Haemophilus parainfluenzae ATCC 33392]
Length = 416
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 57/266 (21%), Positives = 114/266 (42%), Gaps = 5/266 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY +KN +++ S S IG+ +GV LIV +S MNGF ++ R+L + H
Sbjct: 4 PFFISWRYQRGKQKNPLVALISKFSAIGIALGVAVLIVGLSAMNGFERELNSRILAVVPH 63
Query: 68 VVIQQKYYPL----VDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
V I +Q +A RL + + PFVS A V + V V+G+
Sbjct: 64 VEITVNPQGNDPTLNHWQKLAERLKTNKKITALSPFVSFTALVENG-NKLKVVQVKGVDK 122
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + G+ F G+++G +A+ L + GD +++L +
Sbjct: 123 QAEDQVSSLSKFVEGDGWQKFAEEGGLVLGSGIAKALDVKAGDWVSLLISQPNGEDQMAQ 182
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ V + R+ + + Q +L E+ ++G+E+ V DP +++ +
Sbjct: 183 PNRERVQVTAILRLDGQLDHSYALLALPQAQELMGYREDQITGVELKVDDPFKVQEMDYS 242
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
++ + + +W ++ + +
Sbjct: 243 MLNDYPQLLYIQNWVAKFGYMYRDIQ 268
>gi|299769096|ref|YP_003731122.1| ABC-type transport system [Acinetobacter sp. DR1]
gi|298699184|gb|ADI89749.1| ABC-type transport system [Acinetobacter sp. DR1]
gi|325123112|gb|ADY82635.1| transport protein of outer membrane lipoproteins (ABC superfamily,
membrane) [Acinetobacter calcoaceticus PHEA-2]
Length = 381
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 54/237 (22%), Positives = 110/237 (46%), Gaps = 2/237 (0%)
Query: 33 FIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPD 92
+G+ +GV LI V+SVMNGF ++ RVLG+ + L D+ + R++ P
Sbjct: 1 MVGLTLGVAVLITVLSVMNGFDRELKNRVLGMVPQATVSS-TQILTDWPELVKRVEHHPH 59
Query: 93 VIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVII 152
V V PF Q ++ ++ + + G++ + G+++
Sbjct: 60 VTGVAPFTQLQGMLTAQGQVAGIMVTGIDPKYEKNVSIIQNHIVAGSLDSLKKGEFGIVL 119
Query: 153 GKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQ 212
GKD+A +LG+ + D + ++ P +P G+ R K + V+G+F + D+ + Y++L
Sbjct: 120 GKDMADSLGLRLNDSVTLVLPEATPSPAGVVPRFKRFKVVGIF-SVGAEVDSMVGYIALY 178
Query: 213 EAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+A L + G+ + + D A + +++V+ L + +W + F+ +
Sbjct: 179 DASTLLRLPDGAQGVRLKLDDIFAAPQVADDLVKSLPSNFYATNWTYTHGNLFNAIQ 235
>gi|213158297|ref|YP_002320348.1| lipoprotein-releasing system transmembrane protein LolE
[Acinetobacter baumannii AB0057]
gi|215482590|ref|YP_002324782.1| Lipoprotein-releasing system transmembrane protein lolE
[Acinetobacter baumannii AB307-0294]
gi|213057457|gb|ACJ42359.1| lipoprotein-releasing system transmembrane protein LolE
[Acinetobacter baumannii AB0057]
gi|213989045|gb|ACJ59344.1| Lipoprotein-releasing system transmembrane protein lolE
[Acinetobacter baumannii AB307-0294]
gi|322509089|gb|ADX04543.1| Transport protein of outer membrane lipoproteins [Acinetobacter
baumannii 1656-2]
gi|323519120|gb|ADX93501.1| ABC-type transport system [Acinetobacter baumannii TCDC-AB0715]
Length = 381
Score = 113 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 55/237 (23%), Positives = 110/237 (46%), Gaps = 2/237 (0%)
Query: 33 FIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPD 92
+G+ +GV LI V+SVMNGF ++ RVLG+ + L D+ + R++ P
Sbjct: 1 MVGLTLGVAVLITVLSVMNGFDRELKNRVLGMVPQATVSS-TQILTDWPELVKRVENHPH 59
Query: 93 VIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVII 152
V V PF Q ++ ++ + + G++ + G+++
Sbjct: 60 VTGVAPFTQLQGMLTAQGQVAGIMVTGIDPKYEKNVSIIQNHIVAGSLDSLKKGEFGIVL 119
Query: 153 GKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQ 212
GKD+A +LG+ + D + ++ P +P G+ R K + V+G+F + D+ + Y++L
Sbjct: 120 GKDMADSLGLRLNDSVTLVLPEATPSPAGVVPRFKRFKVVGIF-SVGAEVDSMVGYIALY 178
Query: 213 EAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+A L + G+ + + D A + ++IV+ L + +W + F+ +
Sbjct: 179 DASTLLRLPDGAQGVRLKLDDIFAAPQVADDIVKNLPSNFYATNWTYTHGNLFNAIQ 235
>gi|332089278|gb|EGI94384.1| lipoprotein releasing system, transmembrane protein LolE [Shigella
boydii 5216-82]
gi|332092810|gb|EGI97878.1| lipoprotein releasing system, transmembrane protein LolE [Shigella
dysenteriae 155-74]
Length = 412
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 50/265 (18%), Positives = 102/265 (38%), Gaps = 1/265 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L +
Sbjct: 1 MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H I+ P ++Q + + +P + P+++ V + + V+G++
Sbjct: 61 VPHGEIEAVNQPWTNWQEALDNVQKVPGIAAAAPYINFTGLVESG-ANLRAIQVKGVNPQ 119
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
L S G+ +F G+ II + + +
Sbjct: 120 QEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQ 179
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + D+ + L +AQ Y ++ ++VSGI + + D K +
Sbjct: 180 PKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDA 239
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ + V + W Y + +
Sbjct: 240 GEVTNSYVYIKSWIGTYGYMYRDIQ 264
>gi|170768027|ref|ZP_02902480.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia albertii TW07627]
gi|170122793|gb|EDS91724.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia albertii TW07627]
Length = 414
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 113/267 (42%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L
Sbjct: 1 MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ P ++Q +++ +P + P+++ V ++ + +
Sbjct: 61 AVVPHGEIEAVNQPWTNWQEALDKVQKVPGIAAAAPYINFTGLVESGTNLRALQVKGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ + +IIGK +A L + GD ++I+ P + M
Sbjct: 121 QQEQQLSALPSFVQGDAWNHFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLM 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + G+ + D+ + L +AQ Y ++ ++VSGI + + D K
Sbjct: 181 QPKRVRLHIAGILQ-LSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 240 DAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|209809470|ref|YP_002265008.1| outer membrane-specific lipoprotein transporter subunit LolE
[Aliivibrio salmonicida LFI1238]
gi|208011032|emb|CAQ81446.1| lipoprotein-releasing system transmembrane protein [Aliivibrio
salmonicida LFI1238]
Length = 414
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 64/267 (23%), Positives = 115/267 (43%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS + + R+ + ++N +S S S +G+ IGV +I+ +S MNGF ++ RVL
Sbjct: 1 MFSPLSLFIGGRFARAKQRNKMVSFISISSTLGIAIGVAVIIIGLSAMNGFERELQNRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H ++ P+ D+Q + + P V P+V A + S + +
Sbjct: 61 SVIPHAELEGVKNPITDWQTMMQQAKQHPKVTGAAPYVRFTALLERGSKLKAVEVRGVDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S + G + + VI+GK +A L +++GD I L P +
Sbjct: 121 VLETSVSKLPEYINKGAWESFSAHKQSVILGKGVADTLNVNVGDWITALIPDENSDKQLR 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + V+ D+G+ + LQ+AQ Y NL AVSG+ + V D +
Sbjct: 181 SPKRQRLQVV-GLLSLGGQVDHGLAIIPLQDAQQYINLGKAVSGVSLQVSDVLEAQDIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L V + W Q+Y + +
Sbjct: 240 EVGGTLTEYVYLRSWIQKYGYLYRDIQ 266
>gi|218131519|ref|ZP_03460323.1| hypothetical protein BACEGG_03138 [Bacteroides eggerthii DSM 20697]
gi|217986451|gb|EEC52788.1| hypothetical protein BACEGG_03138 [Bacteroides eggerthii DSM 20697]
Length = 410
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 56/273 (20%), Positives = 106/273 (38%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+A RYLFS +K+ I+I S IS GV + +AL+ +SV NGF++ +
Sbjct: 1 MNLPFFIARRYLFSKKKHNAINIISGISVCGVALATLALVCTLSVFNGFQDMVAGFFTAF 60
Query: 65 NGH-VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ + ++ + ++ +P++ + A V V+ N
Sbjct: 61 DPELKITIREGKVFDPLESRIRQVRVLPEIDVWTETLEENAMVQYKDRQAMAVIKGVEDN 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARN--LGISIGDKINILSPYGDV---- 177
+ +S G + +G +L GI D + + +P +V
Sbjct: 121 FEQLTSIDSLLYGTGKFILNDSVVDYGFMGVELVSELGTGIQFVDPLRVYAPKRNVRVNI 180
Query: 178 -TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
P + ++ +F + YD+ + L A+ FN + VS IE+ +K
Sbjct: 181 ANPAAAFNQDYLFSPGAVFVVNQQKYDSRYILTPLSFARRLFNYDTEVSAIELKLKPGSN 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + RILG+ VV + ++ F E
Sbjct: 241 TDAVQKKMERILGDRFVVQNRYEQQADVFRIME 273
>gi|167041978|gb|ABZ06715.1| putative Predicted permease [uncultured marine microorganism
HF4000_141E02]
Length = 396
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 66/245 (26%), Positives = 109/245 (44%)
Query: 25 ISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIA 84
+S S S +G+ IGV ++ VMSVMNGF+ ++ R+LGI H I L + +
Sbjct: 3 MSFISMFSVLGIAIGVAVIVTVMSVMNGFQSEVKNRMLGILPHAKIMGLGGSLENRDALQ 62
Query: 85 NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDF 144
L DV FVS +A + G S + G + +
Sbjct: 63 AALIANKDVKSFSAFVSSEALLLGSKEVSGIQFKGIDPKESGSAQKLEGLMVQGQLDSMS 122
Query: 145 DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDN 204
+ +++GK LA +L +S+GD + ++ P ++ MG+ R K +TV G F ++D
Sbjct: 123 NGSFNIVLGKGLADDLNLSLGDPVTVMIPNSLISAMGVIPRLKQFTVSGFFEAGVYEFDR 182
Query: 205 GMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIF 264
+ + +L +AQ + +SG+E+ DP + I G G + DW + F
Sbjct: 183 NLAFANLLDAQTLLQMPGKISGMEIDFFDPKQSREMVRKIAIGSGGGYTITDWTVQNPNF 242
Query: 265 FSCYE 269
F E
Sbjct: 243 FRSLE 247
>gi|261867667|ref|YP_003255589.1| lipoprotein releasing system, transmembrane protein LolC
[Aggregatibacter actinomycetemcomitans D11S-1]
gi|261412999|gb|ACX82370.1| lipoprotein releasing system, transmembrane protein LolC
[Aggregatibacter actinomycetemcomitans D11S-1]
Length = 394
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 46/267 (17%), Positives = 89/267 (33%), Gaps = 11/267 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +A RY + + F + + ++ G+++GVMALI+V+SVMNG ++VL
Sbjct: 1 MTLSTPLFIALRYWRAKSADRFGRLVTNLAGFGIVLGVMALIIVLSVMNGLEGYQKQQVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H ++ +D V + V Q + G+
Sbjct: 61 STIPHAIVSPNGNAKIDDAPPTMPDFVQKAVPINMTNVIFQTAGGVSAGQVIGIRQFSDD 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
G +IIG LA+ L + +GDK+ ++
Sbjct: 121 P------LLFDFPEQEFDKMLPTGGFRIIIGDQLAQKLNLHVGDKVRLMITENSQYTPFG 174
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
+ + + + + +L + + V G +F+ DP I
Sbjct: 175 RVPLQRLFTVSEIYFDNSEVSGYEAFTNLTDIGRLMRIQPGEVQGFRLFLADPFQI---- 230
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + DW+ + FF
Sbjct: 231 TALPTAFPADYQISDWRTQKGEFFQAV 257
>gi|191173051|ref|ZP_03034584.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli F11]
gi|300982399|ref|ZP_07176097.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 200-1]
gi|190906596|gb|EDV66202.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli F11]
gi|300307236|gb|EFJ61756.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 200-1]
gi|324013209|gb|EGB82428.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli MS 60-1]
Length = 414
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 50/269 (18%), Positives = 105/269 (39%), Gaps = 3/269 (1%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ +++ R+ R+ +S+ S IS IG+ +GV L+V +S MNGF ++ R
Sbjct: 1 MAM--PLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLLVGLSAMNGFERELNNR 58
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+L + H I+ P ++Q + + +P + P+++ V + + V+G
Sbjct: 59 ILAVVPHGEIEAVDQPWTNWQEALDNVQKVPGIAAAAPYINFTGLVESG-ANLRAIQVKG 117
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
++ L S G+ +F G+ II + +
Sbjct: 118 VNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEH 177
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ + + D+ + L +AQ Y ++ ++VSGI + + D K
Sbjct: 178 KLMQPKRVRLHIAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKL 237
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 238 VRDAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|192359404|ref|YP_001982254.1| lipoprotein releasing system, permease [Cellvibrio japonicus
Ueda107]
gi|190685569|gb|ACE83247.1| lipoprotein releasing system, permease protein [Cellvibrio
japonicus Ueda107]
Length = 412
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 61/267 (22%), Positives = 106/267 (39%), Gaps = 4/267 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + ++ RY S+R + +S S +S G++IGV L++VMS+MNGF D+ + +L
Sbjct: 1 MIKPYIFLLGARYGLSHRHSQLVSFISRLSTAGLVIGVGLLVLVMSIMNGFDRDLRENIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
GI + D + +L P ++ PFV +S L
Sbjct: 61 GIMPQA-SLYHRDAITDADALIGQLSQDPRILGASPFVQLNGLLSVRKQVAPVALFGVDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S G + G++IG+ +A L S+GD ++++ P G
Sbjct: 120 AQESSTSNLEKYLPGGTFAQLAQSPMGIVIGRGVAEKLNTSVGDNLSLIVPAGSGDTQAP 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
I+ + + DNG+ M+L EA V+GI + V D A +
Sbjct: 180 RIQVVHVLAIIDSHT---ELDNGLALMNLTEASSLSGHPGQVTGIRLKVADLFAAPEIVY 236
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
V L G W + + + +
Sbjct: 237 EWVGQLPPGYYGSSWMRTHGNVYQAIQ 263
>gi|99034569|ref|ZP_01314537.1| hypothetical protein Wendoof_01000651 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 385
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 74/243 (30%), Positives = 120/243 (49%), Gaps = 5/243 (2%)
Query: 28 ASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRL 87
+ S IG+ +GV LIVVMSVMNGFR ++ +LGI+GH+ + DY ++ +
Sbjct: 1 MTLFSIIGIALGVATLIVVMSVMNGFRAKLLDSILGIDGHINVYFDRNINSDYYAVSKSI 60
Query: 88 DFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRG 147
+ IP ++K P + Q + V+ + + + G+V
Sbjct: 61 ERIPGILKATPMTNDQVIIVANGKIAGSVVRGVSTKDLLDSTAVTNNVIIGDV---KKFD 117
Query: 148 KGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMV 207
+G+IIG LA L I GD+I +S +G R K Y V+ +F M +YDN ++
Sbjct: 118 EGIIIGARLAEVLNIDYGDEITFISSEEFDALLGEMPRMKKYKVIAIFDMGMFEYDNTLI 177
Query: 208 YMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSC 267
YM L+ AQ +FN +N++ IEV V D +K + I + +G + WQ + +FS
Sbjct: 178 YMPLKSAQAFFNYKNSIKNIEVLVDDVTRADKLADAIEKEIG--MEAESWQSQQSHYFSA 235
Query: 268 YES 270
++
Sbjct: 236 LKT 238
>gi|315126505|ref|YP_004068508.1| outer membrane lipoproteins ABC transporter membrane protein
[Pseudoalteromonas sp. SM9913]
gi|315015019|gb|ADT68357.1| outer membrane lipoproteins ABC transporter membrane protein
[Pseudoalteromonas sp. SM9913]
Length = 405
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 72/267 (26%), Positives = 123/267 (46%), Gaps = 3/267 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY S++ NAFIS SF S G+ IG+MAL V SVMNGF + +L
Sbjct: 1 MFQPVSLFIGLRYSRSSKGNAFISFISFFSIAGIAIGLMALFTVSSVMNGFESSLKSNML 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ HV IQ K + + L+ P V V + G+A + + GVL++G+
Sbjct: 61 GLIPHVEIQAKDHSKAQMNSLKPALEQSPYVDHVSLYRHGEAILQ-TNKDLHGVLLQGLY 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+++ S + + GN N + + I + L+R LG+ +GDK+ ++ P
Sbjct: 120 DNNGSLYKITDKIVQGNWQNVLNNNYNIAISRYLSRKLGVGLGDKLRVIMPNASTYTPLG 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTH 241
+ S+ + + D G+ + S Q L N V + V + +P A+++
Sbjct: 180 RMPSQRLFKIAAIYETGSEIDMGLAFTSGVSLQRVLKLSNNTVPNLSVSLHEPFALDQFM 239
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
++ IL N + DW+ F+
Sbjct: 240 QDSQHIL-NDFKLTDWRSSQGTLFAAV 265
>gi|293392256|ref|ZP_06636590.1| lipoprotein releasing system, transmembrane protein LolC
[Aggregatibacter actinomycetemcomitans D7S-1]
gi|290952790|gb|EFE02909.1| lipoprotein releasing system, transmembrane protein LolC
[Aggregatibacter actinomycetemcomitans D7S-1]
Length = 394
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 51/267 (19%), Positives = 100/267 (37%), Gaps = 11/267 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +A RY + + F + + ++ G+++GVMALI+V+SVMNG ++VL
Sbjct: 1 MTLSTPLFIALRYWRAKSADRFGRLVTNLAGFGIVLGVMALIIVLSVMNGLEGYQKQQVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H ++ I + +PD ++ ++ + + G S V GI
Sbjct: 61 STIPHAIVSPNGNA-----KIDDVPPTMPDFVQKAVPINMTNVIFQTAGGVSAGQVIGIR 115
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
L +F + G +IIG LA+ L + +GDK+ ++
Sbjct: 116 QFSDDPLLFNFPEQEFDKI-LPTGGFKIIIGDQLAQKLNLHVGDKVRLMITENSQYTPFG 174
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
+ + + + + +L + + V G +F+ DP I
Sbjct: 175 RVPLQRLFTVSEIYFDNSEVSGYEAFTNLTDIGRLMRIQPGEVQGFRLFLADPFQI---- 230
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + DW+ + FF
Sbjct: 231 TALPTAFPADYQISDWRTQKGEFFQAV 257
>gi|253773859|ref|YP_003036690.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253324903|gb|ACT29505.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli 'BL21-Gold(DE3)pLysS AG']
Length = 412
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 54/265 (20%), Positives = 110/265 (41%), Gaps = 1/265 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L +
Sbjct: 1 MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H I+ P ++Q + + +P + P+++ V ++ + +
Sbjct: 61 VPHGEIEAVNQPWTNWQEALDNVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQ 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ N + +IIGK +A L + GD ++I+ P + M
Sbjct: 121 EQHLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQP 180
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + G+ + D+ + L +AQ Y ++ ++VSGI + + D K +
Sbjct: 181 KRVRLHIAGILQ-LSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDA 239
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ + V + W Y + +
Sbjct: 240 GEVTNSYVYIKSWIGTYGYMYRDIQ 264
>gi|224537526|ref|ZP_03678065.1| hypothetical protein BACCELL_02405 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520839|gb|EEF89944.1| hypothetical protein BACCELL_02405 [Bacteroides cellulosilyticus
DSM 14838]
Length = 410
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 56/273 (20%), Positives = 104/273 (38%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+A RYLFS +K+ I+I S IS GV + +AL+ +SV NGF++ +
Sbjct: 1 MNLPFYIARRYLFSKKKHNAINIISGISVCGVALATLALVCTLSVFNGFQDMVAGFFTAF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + I + + + Q A + I V + + + +++G+ ++
Sbjct: 61 DPELKITIREGKVFEPQGAAFQEVRSLPEIGVWTETLEENAMVQYKDRQAMAIIKGVEDN 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGV---IIGKDLARNLGISIGDKINILSPYGDV---- 177
+ D + G+ D + + +P +V
Sbjct: 121 FEELTSIDSLLYGAGEFILHDSIVDYGVLGVELISELGTGLQFVDPLQVYAPKRNVRVNM 180
Query: 178 -TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
P R ++ +F + YD + SL A+ FN + VS +E+ +K
Sbjct: 181 ANPSASFNRDYLFSPGVVFVVNQQKYDARYILTSLSFARNLFNYDTEVSAVELKLKPGAD 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I RILG+ VV+D ++ F E
Sbjct: 241 VTAVQRKIARILGDEFVVLDRYEQQADVFRIME 273
>gi|313650426|gb|EFS14833.1| liporeleasing system, transmembrane protein LolE [Shigella flexneri
2a str. 2457T]
Length = 412
Score = 112 bits (279), Expect = 6e-23, Method: Composition-based stats.
Identities = 50/265 (18%), Positives = 102/265 (38%), Gaps = 1/265 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L +
Sbjct: 1 MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H I+ P ++Q + + +P + P+++ V + + V+G++
Sbjct: 61 VPHGEIEAVNQPWTNWQEALDNVQKVPGIAAAAPYINFTGLVESG-ANLRAIQVKGVNPQ 119
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
L S G+ +F G+ II + + +
Sbjct: 120 QEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQ 179
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + D+ + L +AQ Y ++ ++VSGI + + D K +
Sbjct: 180 PKRVRLHIAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDA 239
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ + V + W Y + +
Sbjct: 240 GEVTNSYVYIKSWIGTYGYMYRDIQ 264
>gi|330910934|gb|EGH39444.1| lipoprotein releasing system transmembrane protein LolE
[Escherichia coli AA86]
Length = 412
Score = 112 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 50/265 (18%), Positives = 102/265 (38%), Gaps = 1/265 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L +
Sbjct: 1 MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H I+ P ++Q + + +P + P+++ V + + V+G++
Sbjct: 61 VPHGEIEAVDQPWTNWQEALDNVQKVPGIAAAAPYINFTGLVESG-ANLRAIQVKGVNPQ 119
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
L S G+ +F G+ II + + +
Sbjct: 120 QEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQ 179
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + D+ + L +AQ Y ++ ++VSGI + + D K +
Sbjct: 180 PKRVRLHIAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDA 239
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ + V + W Y + +
Sbjct: 240 GEVTNSYVYIKSWIGTYGYMYRDIQ 264
>gi|329962337|ref|ZP_08300342.1| efflux ABC transporter, permease protein [Bacteroides fluxus YIT
12057]
gi|328530198|gb|EGF57079.1| efflux ABC transporter, permease protein [Bacteroides fluxus YIT
12057]
Length = 409
Score = 112 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 57/273 (20%), Positives = 102/273 (37%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+A RYLFS +K+ I++ S IS GV + +AL+ +SV NGF++ +
Sbjct: 1 MNLPFYIARRYLFSKKKHNAINVISGISVCGVALATLALVCTLSVFNGFQDMVAGFFTAF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + I + + A I+V + + + +++G+ +
Sbjct: 61 DPELKITVREGKVFSPGGSAFEEVRALPEIEVWTETLEENAMVQYKDRQAMAVIKGVDEN 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVII---GKDLARNLGISIGDKINILSPYGDV---- 177
+ D I GI D + + +P +V
Sbjct: 121 FEQLTSIDSLLYGTGKFILHDEAVDYGILGVELISELGTGIQFVDPLQVYAPKRNVRVNM 180
Query: 178 -TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
P R ++ +F + YD + SL A+ FN + VS IE+ +K +
Sbjct: 181 ANPSASFNRDYLFSPGAVFIVNQQKYDANYILTSLDFARRLFNYDTEVSAIELKLKPDAS 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + I RILGNG V + ++ F E
Sbjct: 241 PDAVQKKISRILGNGFSVQNRYEQQADVFRIME 273
>gi|161870078|ref|YP_001599248.1| lipoprotein releasing system transmembrane protein lolC [Neisseria
meningitidis 053442]
gi|161595631|gb|ABX73291.1| Lipoprotein releasing system transmembrane protein lolC [Neisseria
meningitidis 053442]
Length = 389
Score = 112 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 59/241 (24%), Positives = 117/241 (48%), Gaps = 1/241 (0%)
Query: 30 FISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDF 89
+S G+ +GV ALIVV+SVMNGF++++ ++L + H I D++ + +
Sbjct: 1 MVSIAGIALGVTALIVVLSVMNGFQKEIRGQLLNVAPHAEIGYIDNTDTDWRNLLRFTEN 60
Query: 90 IPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKG 149
++ P+VS QA ++ + + + + ++ G +
Sbjct: 61 RKGILAAAPYVSNQALLANAGEIRGVQMRGILPSEERKVVEYGDKMPAGKFEDLIPGEFD 120
Query: 150 VIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYM 209
+I+G LA LG +G+K+ +++P G+VTP G+ R K +TV+G+ + + DN +
Sbjct: 121 IILGVGLAEALGAEVGNKVTVITPEGNVTPAGVVPRLKQFTVVGLVKTGVYEVDNSLAMT 180
Query: 210 SLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV-RILGNGVVVIDWQQRYQIFFSCY 268
+Q+A++ + L+ V+G+ + + DP ++ + V V DW + +F
Sbjct: 181 HIQDARVLYRLDKEVAGLRLKLADPQNAPALTATLIPEAQRDTVWVRDWTFSNRSYFEAV 240
Query: 269 E 269
E
Sbjct: 241 E 241
>gi|212712825|ref|ZP_03320953.1| hypothetical protein PROVALCAL_03922 [Providencia alcalifaciens DSM
30120]
gi|212684517|gb|EEB44045.1| hypothetical protein PROVALCAL_03922 [Providencia alcalifaciens DSM
30120]
Length = 387
Score = 112 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 59/254 (23%), Positives = 108/254 (42%), Gaps = 7/254 (2%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
+ + F S +S IG+ +GV ALI V SVMNGF + +L ++
Sbjct: 1 MRGRAVDKFGRFVSSLSAIGITLGVAALITVTSVMNGFERSLQDSILAYMPQAILTSSTG 60
Query: 76 PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSR 135
+ Q L + V K+ P V + + ++ G G++ S+ L
Sbjct: 61 NIDPNQHPITDLKNLHGVKKIEPIVQSEVVLQSRTNVGVGMMSGIRSDESSLLLDK---L 117
Query: 136 FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSP-YGDVTPMGMGIRSKSYTVLGM 194
G+ + D V +G LA LG+ GD+I ++ P +TPMG + +TV G+
Sbjct: 118 ISGDRHDLIDGEYNVFLGNRLAETLGVKRGDQIRLIIPGVSQLTPMGRIPSQRLFTVAGI 177
Query: 195 FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVV 254
F+ + ++ A++ ++G +++ +P ++ + + L G+V
Sbjct: 178 FQTNGEADTSELIVAQPDAARMLRYPAGNITGWRLYLDEPLQVDVASK---QTLPEGLVW 234
Query: 255 IDWQQRYQIFFSCY 268
DW++R FF
Sbjct: 235 TDWRERKGEFFQAV 248
>gi|253989208|ref|YP_003040564.1| outer membrane-specific lipoprotein transporter subunit LolE
[Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
gi|253780658|emb|CAQ83820.1| lipoprotein releasing system transmembrane protein lole
[Photorhabdus asymbiotica]
Length = 415
Score = 112 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 53/264 (20%), Positives = 106/264 (40%), Gaps = 1/264 (0%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
++ A R+ R +S+ S IS +G+M+GV LI+ +S MNGF ++ R+L +
Sbjct: 5 PLSLVTALRFSRGRRGGGMVSLISVISTLGIMLGVAVLIIGLSAMNGFERELRNRILSVV 64
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
H I P +Q R+ V+ P+++ + +S + + ++
Sbjct: 65 PHGEIYAVNQPFEQWQSALERVKNTTGVVAASPYITFTGLMEKGASLHAVQVRGVDLVTE 124
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ + VI+G+ +A L + GD + ++ P D + +
Sbjct: 125 AQVSSLPTFVQDNAWQHFQSGHQQVILGQGVANALKVKQGDWLTVMIPNNDPEMKLLQPK 184
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
V G+F+ D+ + + L +AQ Y + + ++GI + V D A +
Sbjct: 185 RIRLQVSGIFQ-LSGLLDHSLALIPLADAQRYLDYDQGITGIAIKVDDVFAANQRVRAAG 243
Query: 246 RILGNGVVVIDWQQRYQIFFSCYE 269
V + W + Y + +
Sbjct: 244 EASQEYVYISSWIRNYGYMYQDIQ 267
>gi|59713647|ref|YP_206422.1| outer membrane-specific lipoprotein transporter subunit LolE
[Vibrio fischeri ES114]
gi|59481895|gb|AAW87534.1| outer membrane-specific lipoprotein transporter subunit [Vibrio
fischeri ES114]
Length = 414
Score = 112 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 58/267 (21%), Positives = 113/267 (42%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS + + R+ + ++N +S S S +G+ IGV +I+ +S MNGF ++ RVL
Sbjct: 1 MFSPLSLFIGSRFARAKQRNKMVSFISISSTLGIAIGVAVIIIGLSAMNGFERELQNRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H ++ P+ D+Q + + P V P+V A + S + +
Sbjct: 61 SVIPHAELEGVKKPVTDWQSMMIQAKKHPKVTGAAPYVRFTALLERGSKLKAVEVRGVEP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S + + + VI+GK +A L + +GD I + P +
Sbjct: 121 LLENSVSKLPEYIDKAAWNAFEANKQSVILGKGVADTLNVKVGDWITAMIPDENADRQLR 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + V+ D+G+ + L++AQ Y NL ++V+G+ + V +
Sbjct: 181 SPKRQRLQVV-GLLSLGGQVDHGLAIVPLKDAQQYINLGDSVTGVSLQVSSVLNAQDIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L V + W Q+Y + +
Sbjct: 240 EVGGTLSEYVYLRSWIQKYGYLYRDIQ 266
>gi|124246479|ref|YP_588867.2| lipoprotein releasing system, transmembrane protein LolC [Baumannia
cicadellinicola str. Hc (Homalodisca coagulata)]
gi|114841164|gb|ABF14127.2| lipoprotein releasing system, transmembrane protein LolC [Baumannia
cicadellinicola str. Hc (Homalodisca coagulata)]
Length = 397
Score = 112 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 52/267 (19%), Positives = 104/267 (38%), Gaps = 5/267 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ N S +S IG+++GVMAL+ ++S+MNGF + VL
Sbjct: 1 MYQPLALYIGLRYMCRQVSNG--RFISLLSTIGIILGVMALVTILSIMNGFERVLENNVL 58
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
++ K L + I V+ L S S + +
Sbjct: 59 RFIPQALLTTKNGCLNPLSAPFFXKEDILKDKGVIGIAPFTTGDVILQSPNSFAMGIILG 118
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++S +I+G+ LA LG+ DKI I+ P
Sbjct: 119 INSSDSEPLANYLVDTHISQLSPGKYHIILGQKLADKLGVKYNDKIRIIVPSVSQFTPLG 178
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + + + D + ++ Q+A + V+G ++++ P ++
Sbjct: 179 RIPSQRLFTVIGTYITNSEVDQYQILVNQQDASHLMHYPSGYVTGWRLWLQQPLKVDSIS 238
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ ++ L N ++ DW++R F
Sbjct: 239 K--IQCLPNELIWKDWRERKSELFHAI 263
>gi|283784911|ref|YP_003364776.1| lipoprotein-releasing system transmembrane protein [Citrobacter
rodentium ICC168]
gi|282948365|emb|CBG87951.1| lipoprotein-releasing system transmembrane protein [Citrobacter
rodentium ICC168]
Length = 414
Score = 112 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 109/267 (40%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ S +++ R+ R++ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L
Sbjct: 1 MASPLSLLIGLRFSRGRRRSGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ P +++ ++ +P ++ P+++ V ++ + +
Sbjct: 61 AVVPHGEIEAVEQPWNNWREALEKVQKVPGIVAAAPYINFTGLVESGANLRAIQVKGVEP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ + +IIGK +A L + GD ++I+ P M
Sbjct: 121 QQEQRLSALPSFVRNNAWASFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNASADHKLM 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + + +AQ Y ++ N VSGI + V D K
Sbjct: 181 QPKRVRLH-VAGILQLSGQLDHSFAMIPMADAQQYLDMNNTVSGIALKVNDVFNANKLVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + V + W Y + +
Sbjct: 240 AAGEVTNSYVYIKSWIGTYGYMYRDIQ 266
>gi|15606709|ref|NP_214089.1| hypothetical protein aq_1585 [Aquifex aeolicus VF5]
gi|2983943|gb|AAC07492.1| hypothetical protein aq_1585 [Aquifex aeolicus VF5]
Length = 394
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 66/265 (24%), Positives = 126/265 (47%), Gaps = 11/265 (4%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ V RYLF + ++ +F+SF G+ + V A+I+ + V +GF++++ ++L
Sbjct: 1 MSLYLKVVLRYLFHAKGSSL--FMTFMSFFGIFLSVNAIILTLGVFSGFQDELKNKILSK 58
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H+VI + I +V++ V ++ S V +
Sbjct: 59 TPHLVITLYSDYERER---------IKEVLEKEKEVEYFLSFVVYNAFLSSGEVIQSVSV 109
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
++ + + KG+I+GK +A G+ +GD+++++SP+G TP G+
Sbjct: 110 KAIDYKDGEFQKFIKRFLTEGGTKGLILGKGIAEVFGLLVGDEVSLISPFGIRTPTGVIP 169
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ K + V G+F D D +VYM+L++A+ +F + V+ EV++KDP + E +
Sbjct: 170 KVKKFRVGGIFYTGSYDKDYAVVYMNLKDAKEFFKRDYGVNFTEVYIKDPYRADIVKEKV 229
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ LG VVV W + F+ E
Sbjct: 230 KKELGERVVVRSWIDLNKPLFNALE 254
>gi|160891601|ref|ZP_02072604.1| hypothetical protein BACUNI_04054 [Bacteroides uniformis ATCC 8492]
gi|270295325|ref|ZP_06201526.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|156859008|gb|EDO52439.1| hypothetical protein BACUNI_04054 [Bacteroides uniformis ATCC 8492]
gi|270274572|gb|EFA20433.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 411
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 57/273 (20%), Positives = 105/273 (38%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+A RYLFS +K+ I+I S IS GV + +AL+ +SV NGF++ +
Sbjct: 1 MSLPFFIARRYLFSKKKHNAINIISGISVCGVALATLALVCTLSVFNGFQDMVAGFFTAF 60
Query: 65 NGH-VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ + ++ ++ ++ + ++ + A V V+ N
Sbjct: 61 DPELKITVREGKVFDPHEACIRQVHALSEIDVWTETLEENAMVQYKDRQAMAVIKGVEDN 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARN--LGISIGDKINILSPYGDV---- 177
+ +S G +G +L GI D + + +P +V
Sbjct: 121 FEQLTSIDSLLYGTGKFLLSDSVVDYGFLGVELISELGTGIQFVDPLQVYAPKRNVRVNI 180
Query: 178 -TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
P R ++ +F + YD+ + SL A+ FN + VS IE+ +K
Sbjct: 181 ANPTAAFNREYLFSPGAIFAVNQQKYDSRYILTSLDFARRLFNYDTEVSAIEMKLKPGSN 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
I + I ILG+ +V + ++ F E
Sbjct: 241 IGSVQKKIAGILGDRFIVQNRYEQQADVFRIME 273
>gi|197337246|ref|YP_002158062.1| lipoprotein releasing system, transmembrane protein LolE [Vibrio
fischeri MJ11]
gi|197314498|gb|ACH63947.1| lipoprotein releasing system, transmembrane protein LolE [Vibrio
fischeri MJ11]
Length = 414
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 58/267 (21%), Positives = 113/267 (42%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS + + R+ + ++N +S S S +G+ IGV +I+ +S MNGF ++ RVL
Sbjct: 1 MFSPLSLFIGSRFARAKQRNKMVSFISISSTLGIAIGVAVIIIGLSAMNGFERELQNRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H ++ P+ D+Q + + P V P+V A + S + +
Sbjct: 61 SVIPHAELEGVKKPVTDWQSMMIQAKKHPKVTGAAPYVRFTALLERGSKLKAVEVRGVEP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S + + + VI+GK +A L + +GD I + P +
Sbjct: 121 LLENSVSKLPEYIDKAAWNAFEANKQSVILGKGVADTLNVKVGDWITAMIPDENADRQLR 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + V+ D+G+ + L++AQ Y NL ++V+G+ + V +
Sbjct: 181 SPKRQRLQVV-GLLSLGGQVDHGLAIVPLKDAQQYINLGDSVTGVSLQVSSVLNAQDIVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L V + W Q+Y + +
Sbjct: 240 EVGGTLSEYVYLRSWIQKYGYLYRDIQ 266
>gi|258544985|ref|ZP_05705219.1| lipoprotein releasing system transmembrane protein LolC
[Cardiobacterium hominis ATCC 15826]
gi|258519788|gb|EEV88647.1| lipoprotein releasing system transmembrane protein LolC
[Cardiobacterium hominis ATCC 15826]
Length = 415
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 65/269 (24%), Positives = 112/269 (41%), Gaps = 2/269 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ RY ++ FI + + ++ IG+ IG+ ALIVV+SVMNG + ++L
Sbjct: 1 MQILPSKIGLRYSYARSGARFIGLNAILAIIGITIGIAALIVVLSVMNGVVTQVRDKMLS 60
Query: 64 INGHVVIQQKYYP--LVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ H +++ + A L IP++I P+V GQ + VL
Sbjct: 61 MTSHAMLRSSDGTGVIPPEFDPAPYLANIPELIAYAPYVQGQGLIGDSEHFQGVVLQGVD 120
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ Q +I+G+ LA + +GDK+ I+ P + G
Sbjct: 121 PAEEGKVSQTFAKIDPEISGQLEAGHFNLILGQVLAEKINAKVGDKVTIIVPQVTASAAG 180
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ R K +T++G F +DNG+ ++ Q+A L V+G + + DP
Sbjct: 181 LLPRIKRFTLVGTFSSGHYSFDNGVALVNYQDAAKLLQLPEGVTGYHIMLHDPMQAPLVR 240
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYES 270
E + L GV DW +FS ++
Sbjct: 241 ERLTPQLPYGVYASDWSVDNASYFSAVQT 269
>gi|167763869|ref|ZP_02435996.1| hypothetical protein BACSTE_02250 [Bacteroides stercoris ATCC
43183]
gi|167697985|gb|EDS14564.1| hypothetical protein BACSTE_02250 [Bacteroides stercoris ATCC
43183]
Length = 410
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 55/273 (20%), Positives = 107/273 (39%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+A RYLFS +K+ I+I S IS GV + +AL+ +SV NGF++ +
Sbjct: 1 MNLPFFIARRYLFSKKKHNAINIISGISVCGVALATLALVCTLSVFNGFQDMVAGFFTAF 60
Query: 65 NGH-VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ + ++ + ++ +P++ + A V V+ N
Sbjct: 61 DPELKITVREGKVFDPLESRVQQVRALPEIDVWTETLEENAMVQYKDRQAMAVIKGVEDN 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARN--LGISIGDKINILSPYGDV---- 177
+ +S G + +G +L G+ D + + +P +V
Sbjct: 121 FEQLTSIDSLLYGTGKFILNDSVVDYGFMGVELVSELGTGLQFVDPLRVYAPKRNVRVNI 180
Query: 178 -TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
P + ++ +F + YD+ + SL A+ FN + VS IE+ +K
Sbjct: 181 ANPSAAFNQDYLFSPGAVFVVNQQKYDSRYILTSLGFARRLFNYDTEVSAIELKLKPGSN 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + RILG+ +V + ++ F E
Sbjct: 241 TDAVQKKMERILGDRFIVQNRYEQQADVFRIME 273
>gi|53715757|ref|YP_101749.1| hypothetical protein BF4478 [Bacteroides fragilis YCH46]
gi|52218622|dbj|BAD51215.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
Length = 412
Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats.
Identities = 53/273 (19%), Positives = 97/273 (35%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+A RYLFS +K+ I+I S IS GV + MA++ +SV NGF++ +
Sbjct: 1 MNLPFYIARRYLFSKKKHNAINIISAISVCGVALATMAMVCTLSVFNGFQDTVADLFTVF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + + + D Q + + VL + + + +++G+ N+
Sbjct: 61 DPELKVTIAEGKVFDAQDPRIQAIRQMPEVDVLTETLEENAMVQYKDRQTMAVIKGVQNN 120
Query: 125 DFSYLQNSFSRFYGNVSNDFD---RGKGVIIGKDLARNLGISIGDKINILSPYGDV---- 177
+ D + I GI D + I P
Sbjct: 121 FEQLTAIDSILYGAGEFLLNDSIVDYGVMGIELVSTLGTGIRFVDPLQIYIPKRSGKVNM 180
Query: 178 -TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
P Y+ +F + YD + SL A+ + VS IE+ +K
Sbjct: 181 ANPAASFNMDYLYSPGVVFVVNQQKYDGQYILTSLDFARRLLDYTTEVSAIELKLKPGSD 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I + LG+ V+ + ++ + F E
Sbjct: 241 LSFVKAKIKKELGDDFVIRNRYEQQEDVFRIME 273
>gi|152979096|ref|YP_001344725.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Actinobacillus succinogenes 130Z]
gi|150840819|gb|ABR74790.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Actinobacillus succinogenes 130Z]
Length = 405
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 55/273 (20%), Positives = 108/273 (39%), Gaps = 12/273 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +A RY + + F + + ++ G+M+GVMALI+V+SVMNG + K+VL
Sbjct: 1 MNLGISLFIALRYWRAKSADRFGRLVTNLASAGIMLGVMALIIVLSVMNGLEQYQKKQVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDF-----IPDVIKVLPFVSGQAFVSGLSSGGSGVL 117
H ++ K + Q N++ P +++ + ++ + +G S
Sbjct: 61 SDIPHAIVMPKDDVRIPRQENQNKIRQVYLSANPGILQDVALINTTNAIYQTVNGVSAGQ 120
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
V G+ N L + + + +IIG LA L + IGDK+ ++
Sbjct: 121 VIGVQNPTDDKLLTYLDKTQFDS-LLPEGEFKLIIGSQLAEKLHVKIGDKVRLMLTENSQ 179
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFN-LENAVSGIEVFVKDPDA 236
+ ++ + + + ++ + V G+ +F+KDP
Sbjct: 180 YTPFGRVPAQRLFTVSDVYFSGNEVSGYESFANIADIGRLMRIKPQEVQGMRLFLKDPFQ 239
Query: 237 IEKTHENIVRILGNG-VVVIDWQQRYQIFFSCY 268
I + RI + DW+ + FF
Sbjct: 240 I----TELPRIFPEEQWNISDWRSQKGEFFQAV 268
>gi|262382835|ref|ZP_06075972.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|298374243|ref|ZP_06984201.1| membrane protein [Bacteroides sp. 3_1_19]
gi|262295713|gb|EEY83644.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|298268611|gb|EFI10266.1| membrane protein [Bacteroides sp. 3_1_19]
Length = 409
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 50/271 (18%), Positives = 104/271 (38%), Gaps = 6/271 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+A RYLFS + + I+I S +S GV++ +AL+ +SV NGF + +
Sbjct: 1 MNLPFYIARRYLFSKKSHNAINIISMVSVCGVVVATIALVCALSVYNGFNDLVSSLFSNF 60
Query: 65 NGHVVIQQKY-YPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGL-SSGGSGVLVRGIS 122
+ + I + ++ +P ++ + A V G + +
Sbjct: 61 DPELKIMPRKGKVFDPTSEEIRKVRELPGIVCFSEVLQDNALVRYRDRQGVATLKGVDEQ 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT---- 178
+ + + ++++ + IG + + + I +P +
Sbjct: 121 YEKLAQIDSILIDGKFLLNDEVANYANMGIGLAFSLGINAGFVSPLEIYAPKREEKVNMA 180
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+ + +FR YD+ + + L A+ FN + V+ +E+ VKD I
Sbjct: 181 NPASSFNLEYAYIGAVFRTDQQVYDDSYMIVPLSLARSLFNYDKEVTAVELKVKDSGDIA 240
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I RILG+ +V D ++ + F +
Sbjct: 241 PVKKEIQRILGDQYIVQDRFEQQEASFKMMQ 271
>gi|260593342|ref|ZP_05858800.1| putative membrane protein [Prevotella veroralis F0319]
gi|260534618|gb|EEX17235.1| putative membrane protein [Prevotella veroralis F0319]
Length = 410
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 56/272 (20%), Positives = 108/272 (39%), Gaps = 8/272 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RYLFS + I++ S IS +GV + MAL+VV+S NGF + +
Sbjct: 1 MNFPFYIARRYLFSKKSTHAINVISLISVLGVAVATMALVVVLSGFNGFSDLVASFFTNF 60
Query: 65 NGHVVIQQKYYPLVDYQFI-ANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ + I+ + ++ +P V V QA + N
Sbjct: 61 DPQLKIEATKGKAMPADDPLLVKVKHLPGVEVATECVQDQALAVYHDKQAMVTVKGVEDN 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD------- 176
D ++ G+ + + +IG LA++LG + + +
Sbjct: 121 FDSLTHISNILYGDGDFTLHVANLQYGVIGIRLAQDLGTGVTWQDYLQIYAPQREGQYDA 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
P ++ + +F+++ YD G + S+ A+ FN + ++ +E+ +K
Sbjct: 181 SNPTNAFVKDSLVSPGALFQVKQSKYDQGYIITSIDFARRIFNRQGEITSLELRMKPGVD 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
I+ E I +LG+ V+D ++ F+
Sbjct: 241 IDNAKEEIQAMLGDKYKVLDRYEQQADTFNIM 272
>gi|317478321|ref|ZP_07937485.1| lipoprotein-releasing system permease [Bacteroides sp. 4_1_36]
gi|316905480|gb|EFV27270.1| lipoprotein-releasing system permease [Bacteroides sp. 4_1_36]
Length = 411
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 57/273 (20%), Positives = 105/273 (38%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+A RYLFS +K+ I+I S IS GV + +AL+ +SV NGF++ +
Sbjct: 1 MSLPFFIARRYLFSKKKHNAINIISGISVCGVALATLALVCTLSVFNGFQDMVAGFFTAF 60
Query: 65 NGH-VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ + ++ ++ ++ + ++ + A V V+ N
Sbjct: 61 DPELKITVREGKVFDPHEACIRQVHALSEIDVWTETLEENAMVQYKDRQAMAVIKGVEDN 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARN--LGISIGDKINILSPYGDV---- 177
+ +S G +G +L GI D + + +P +V
Sbjct: 121 FEQLTSIDSLLYGTGKFLLSDSVVDYGFLGVELISELGTGIQFVDPLQVYAPKRNVRVNI 180
Query: 178 -TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
P R ++ +F + YD+ + SL A+ FN + VS IE+ +K
Sbjct: 181 ANPTAAFNREYLFSPGAIFAVNQQKYDSRYILTSLDFARRLFNYDTEVSAIEMKLKPGSN 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
I + I ILG+ +V + ++ F E
Sbjct: 241 IGSIQKKIAGILGDRFIVQNRYEQQADVFRIME 273
>gi|262275598|ref|ZP_06053407.1| lipoprotein releasing system transmembrane protein LolC [Grimontia
hollisae CIP 101886]
gi|262219406|gb|EEY70722.1| lipoprotein releasing system transmembrane protein LolC [Grimontia
hollisae CIP 101886]
Length = 398
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 53/268 (19%), Positives = 104/268 (38%), Gaps = 11/268 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RYL + F S++S G+ IGVMAL+ V+SVMNGF + R+L
Sbjct: 1 MFHPLPVFIGIRYLRGRSGDKFGRFVSYMSTAGITIGVMALVTVLSVMNGFEGQLKHRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ A ++ + + V + + + S S R +
Sbjct: 61 GVIPQAIVVGDA-------QHAPDVNTLASLEGVTDTAPIVSTDAVVQSAKSISAGRLLG 113
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G+ ++ +++G+ AR L +S+GDK+ ++
Sbjct: 114 IDAGGHEPIREFMVRGDFNSLKPGSYNLVLGRKTARELDVSVGDKVRVMITSASQFTPVG 173
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
I S+ + D D +++ +L + L + + +FV +P + +
Sbjct: 174 RIPSQRNFTVTGIYDTATDVDAQLMFANLNDVGRLMRLPRTQPADLRLFVAEPFDVPEL- 232
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I +G DW+ F +
Sbjct: 233 QKIAESMG--YEWSDWRVLRGELFQAVK 258
>gi|150009889|ref|YP_001304632.1| hypothetical protein BDI_3305 [Parabacteroides distasonis ATCC
8503]
gi|256838402|ref|ZP_05543912.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|301312379|ref|ZP_07218295.1| putative membrane protein [Bacteroides sp. 20_3]
gi|149938313|gb|ABR45010.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
8503]
gi|256739321|gb|EEU52645.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|300829562|gb|EFK60216.1| putative membrane protein [Bacteroides sp. 20_3]
Length = 409
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 50/271 (18%), Positives = 104/271 (38%), Gaps = 6/271 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+A RYLFS + + I+I S +S GV++ +AL+ +SV NGF + +
Sbjct: 1 MNLPFYIARRYLFSKKSHNAINIISMVSVCGVVVATIALVCALSVYNGFNDLVSSLFSNF 60
Query: 65 NGHVVIQQKY-YPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGL-SSGGSGVLVRGIS 122
+ + I + ++ +P ++ + A V G + +
Sbjct: 61 DPELKIMPRKGKVFDPTSEEIRKVRELPGIVCFSEVLQDNALVRYRDRQGVATLKGVDEQ 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT---- 178
+ + + ++++ + IG + + + I +P +
Sbjct: 121 YEKLAQIDSILIDGKFLLNDEVANYANMGIGLAFSLGINAGFVSPLEIYAPKREEKVNMA 180
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+ + +FR YD+ + + L A+ FN + V+ +E+ VKD I
Sbjct: 181 NPASSFNLEYAYIGAVFRTDQQVYDDSYMIVPLSLARSLFNYDKEVTAVELKVKDSGDIA 240
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I RILG+ +V D ++ + F +
Sbjct: 241 PVKKEIQRILGDQYIVQDRFEQQEASFKMMQ 271
>gi|317476474|ref|ZP_07935723.1| hypothetical protein HMPREF1016_02706 [Bacteroides eggerthii
1_2_48FAA]
gi|316907500|gb|EFV29205.1| hypothetical protein HMPREF1016_02706 [Bacteroides eggerthii
1_2_48FAA]
Length = 410
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 56/273 (20%), Positives = 107/273 (39%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RYLFS +K+ I+I S IS GV + +AL+ +SV NGF++ +
Sbjct: 1 MNFPFFIARRYLFSKKKHNAINIISGISVCGVALATLALVCTLSVFNGFQDMVAGFFTAF 60
Query: 65 NGH-VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ + ++ + ++ +P++ + A V V+ N
Sbjct: 61 DPELKITIREGKVFDPLESRIRQVRVLPEIDVWTETLEENAMVQYKDRQAMAVIKGVEDN 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARN--LGISIGDKINILSPYGDV---- 177
+ +S G + +G +L GI D + + +P +V
Sbjct: 121 FEQLTSIDSLLYGTGKFILNDSVVDYGFMGVELVSELGTGIQFVDPLRVYAPKRNVRVNI 180
Query: 178 -TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
P + ++ +F + YD+ + L A+ FN + VS IE+ +K
Sbjct: 181 ANPAAAFNQDYLFSPGAVFVVNQQKYDSRYILTPLSFARRLFNYDTEVSAIELKLKPGSN 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + RI+G+ VV + ++ F E
Sbjct: 241 TDAVQKKMERIMGDRFVVQNRYEQQADVFRIME 273
>gi|265767301|ref|ZP_06094967.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|263252606|gb|EEZ24118.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
Length = 412
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 53/273 (19%), Positives = 97/273 (35%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+A RYLFS +K+ I+I S IS GV + MA++ +SV NGF++ +
Sbjct: 1 MNLPFYIARRYLFSKKKHNAINIISAISVCGVALATMAMVCTLSVFNGFQDTVADLFTVF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + + + D Q + + VL + + + +++G+ N+
Sbjct: 61 DPELKVTIAEGKVFDAQAPRIQAIRQMPEVDVLTETLEENAMVQYKDRQTMAVIKGVQNN 120
Query: 125 DFSYLQNSFSRFYGNVSNDFD---RGKGVIIGKDLARNLGISIGDKINILSPYGDV---- 177
+ D + I GI D + I P
Sbjct: 121 FEQLTAIDSILYGAGEFLLNDSIVDYGVMGIELVSTLGTGIRFVDPLQIYIPKRSGKVNM 180
Query: 178 -TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
P Y+ +F + YD + SL A+ + VS IE+ +K
Sbjct: 181 ANPAASFNMDYLYSPGVVFVVNQQKYDGQYILTSLDFARRLLDYTTEVSAIELKLKPGSD 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I + LG+ V+ + ++ + F E
Sbjct: 241 LSFVKAKIKKELGDDFVIRNRYEQQEDVFRIME 273
>gi|320197555|gb|EFW72168.1| Lipoprotein releasing system transmembrane protein LolE
[Escherichia coli WV_060327]
Length = 412
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 49/265 (18%), Positives = 101/265 (38%), Gaps = 1/265 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L +
Sbjct: 1 MPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAV 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H I+ P ++Q + + + + P+++ V + + V+G++
Sbjct: 61 VPHGEIEAVDQPWTNWQEALDNVQKVSGIAAAAPYINFTGLVESG-ANLRAIQVKGVNPQ 119
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
L S G+ +F G+ II + + +
Sbjct: 120 QEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQ 179
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + D+ + L +AQ Y ++ ++VSGI + + D K +
Sbjct: 180 PKRVRLHIAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDA 239
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ + V + W Y + +
Sbjct: 240 GEVTNSYVYIKSWIGTYGYMYRDIQ 264
>gi|253566430|ref|ZP_04843883.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|251944602|gb|EES85077.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|301165201|emb|CBW24772.1| putative lipoprotein releasing system transmembrane protein
[Bacteroides fragilis 638R]
Length = 412
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 53/273 (19%), Positives = 97/273 (35%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+A RYLFS +K+ I+I S IS GV + MA++ +SV NGF++ +
Sbjct: 1 MNLPFYIARRYLFSKKKHNAINIISAISVCGVALATMAMVCTLSVFNGFQDTVADLFTVF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + + + D Q + + VL + + + +++G+ N+
Sbjct: 61 DPELKVTIAEGKVFDAQDPRIQAIRQMPEVDVLTETLEENAMVRYKDRQTMAVIKGVQNN 120
Query: 125 DFSYLQNSFSRFYGNVSNDFD---RGKGVIIGKDLARNLGISIGDKINILSPYGDV---- 177
+ D + I GI D + I P
Sbjct: 121 FEQLTAIDSILYGAGEFLLNDSIVDYGVMGIELVSTLGTGIRFVDPLQIYIPKRSGKVNM 180
Query: 178 -TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
P Y+ +F + YD + SL A+ + VS IE+ +K
Sbjct: 181 ANPAASFNMDYLYSPGVVFVVNQQKYDGQYILTSLDFARRLLDYTTEVSAIELKLKPGSD 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I + LG+ V+ + ++ + F E
Sbjct: 241 LSFVKAKIKKELGDDFVIRNRYEQQEDVFRIME 273
>gi|124007682|ref|ZP_01692385.1| releasing system transmembrane protein [Microscilla marina ATCC
23134]
gi|123986804|gb|EAY26576.1| releasing system transmembrane protein [Microscilla marina ATCC
23134]
Length = 411
Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 52/273 (19%), Positives = 105/273 (38%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ +A RY FS K FI++ S +S I V +G +ALI+V+SV NG +E +
Sbjct: 1 MNLPLFIARRYFFSKHKKQFINVISILSMIEVAVGTIALILVLSVFNGLQELIQGLHDTF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N + ++ + + +K++ + V +G V V+G+S +
Sbjct: 61 NPELKVEPIKGKSFEVSSQLIKKIEAVPGVKIVSEIIEDNAVLRYKNGQMVVKVKGVSEN 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG--- 181
+ + G + + +IG+ + L I + + + L +
Sbjct: 121 YLEQTRMDSAIRKGEFALYKNGRPRAVIGQGVQYTLAIGLRNDFDALQLWYPKKVKKITL 180
Query: 182 -----MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
+ +K YD V++ L+ A +N + +E+ +K+
Sbjct: 181 GINAEKKLINKKAIFPIGVFSLEQQYDASYVFVPLKFAANLLQYDNRRTSLEIQLKEKAD 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ T + I +LGN V+D ++ +
Sbjct: 241 TDATKKGIKEVLGNNFKVLDRNEQQANLLKAIQ 273
>gi|288818272|ref|YP_003432620.1| lipoprotein releasing system transmembrane protein, LolC/E family
[Hydrogenobacter thermophilus TK-6]
gi|288787672|dbj|BAI69419.1| lipoprotein releasing system transmembrane protein, LolC/E family
[Hydrogenobacter thermophilus TK-6]
gi|308751869|gb|ADO45352.1| protein of unknown function DUF214 [Hydrogenobacter thermophilus
TK-6]
Length = 396
Score = 111 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 64/261 (24%), Positives = 117/261 (44%), Gaps = 13/261 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A RY +++ + + S I+ +GV++ ++A+++ M V GF+ + +++L + H+
Sbjct: 9 FNIALRYTLASKGSTLL--VSVIALLGVVLSIVAILLTMGVFAGFQHALKEKILSTSPHI 66
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
V+ + R+ + V V P V QA VS S S + +
Sbjct: 67 VVSLLDSQNMP--DYQERIKTLKGVKSVYPVVLYQAIVSKGGSLQSVSIKGMKPSDIIQK 124
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ + G+++GK LA +GI GD++ ++SP G TP G +
Sbjct: 125 KKFLVKGEFKG---------GLLVGKGLADIMGIKPGDEVLLVSPMGKSTPFGFLPKVGH 175
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ V G+F+ D D V M + EA +F + G EVF+KDP ++ I + L
Sbjct: 176 FRVDGIFQTGSFDQDYLTVLMPMSEANDFFGPSWQLYGFEVFIKDPYKAQQVKAQIEKEL 235
Query: 249 GNGVVVIDWQQRYQIFFSCYE 269
+ +V W + F+ E
Sbjct: 236 SDSAIVRSWIDLNKPLFNALE 256
>gi|60683688|ref|YP_213832.1| putative lipoprotein releasing system transmembrane protein
[Bacteroides fragilis NCTC 9343]
gi|60495122|emb|CAH09943.1| putative lipoprotein releasing system transmembrane protein
[Bacteroides fragilis NCTC 9343]
Length = 412
Score = 111 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 53/273 (19%), Positives = 97/273 (35%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+A RYLFS +K+ I+I S IS GV + MA++ +SV NGF++ +
Sbjct: 1 MNLPFYIARRYLFSKKKHNAINIISAISVCGVALATMAMVCTLSVFNGFQDTVADLFTVF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + + + D Q + + VL + + + +++G+ N+
Sbjct: 61 DPELKVTIAEGKVFDAQAPRIQAIRQMPEVDVLTETLEENAMVQYKDRQTMAVIKGVQNN 120
Query: 125 DFSYLQNSFSRFYGNVSNDFD---RGKGVIIGKDLARNLGISIGDKINILSPYGDV---- 177
+ D + I GI D + I P
Sbjct: 121 FEQLTAIDSILYGAGEFLLNDSIVDYGVMGIELVSTLGTGIRFVDPLQIYIPKRSGKVNM 180
Query: 178 -TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
P Y+ +F + YD + SL A+ + VS IE+ +K
Sbjct: 181 ANPAASFNMDYLYSPGVVFVVNQQKYDGQYILTSLDFARRLLDYTTEVSAIELKLKPGSD 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I + LG+ V+ + ++ + F E
Sbjct: 241 LSFVKAKIKKELGDDFVIRNRYEQQEDVFRIME 273
>gi|315634394|ref|ZP_07889681.1| lipoprotein ABC superfamily ATP binding cassette transporter,
membrane protein [Aggregatibacter segnis ATCC 33393]
gi|315476984|gb|EFU67729.1| lipoprotein ABC superfamily ATP binding cassette transporter,
membrane protein [Aggregatibacter segnis ATCC 33393]
Length = 394
Score = 111 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 47/267 (17%), Positives = 96/267 (35%), Gaps = 11/267 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +A RY + + F + + ++ G+++GVMALI+V+SVMNG ++VL
Sbjct: 1 MTLSTPLFIALRYWRAKSADRFGRLVTNLASFGIVLGVMALIIVLSVMNGLEGYQKQQVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H ++ +D V + V Q +G ++
Sbjct: 61 SSIPHAIVSPNGKVKIDDAEPTMPNFVQKAVPINMTNVIFQTAGGV----SAGQVIGIRQ 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+D L + + + +IIG LA+ L + +GDK+ ++
Sbjct: 117 FADDPILSILSEQHFED--LLPTGEFKIIIGDQLAQKLNLHVGDKVRLMITENSQYTPFG 174
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
+ + + + + +L + + G +F+ DP I
Sbjct: 175 RVPLQRLFTVSEIYFETGEVSGYEAFANLTDIGRLMRIQPGEAQGFRLFLTDPFQI---- 230
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + +IDW+ + FF
Sbjct: 231 TELPAAFPSAEQIIDWRTQKGEFFQAV 257
>gi|260910467|ref|ZP_05917136.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
F0295]
gi|260635413|gb|EEX53434.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
F0295]
Length = 409
Score = 111 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 52/270 (19%), Positives = 97/270 (35%), Gaps = 8/270 (2%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+ +A RYLFS + I++ S IS +GV + MAL++V+SV NGF + + +
Sbjct: 3 VSLFIARRYLFSKKSTNAINVISAISVVGVAVATMALVIVLSVFNGFHDLVASLFTAFDP 62
Query: 67 HVVIQQKYYPLVDYQFI-ANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+ + + +P+V V A V + N
Sbjct: 63 QIEVVPAKGKDAPTDDPLLTEIKQLPEVDVATECVEDNALVFYGDKQAMVTIKGVEDNFT 122
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
N G + + ++G LA+ LG K + +
Sbjct: 123 QLTRINDLLYGEGEFALRAANLQYGVLGIRLAQQLGTGARWKGFMRVFAPNREGQFDISN 182
Query: 186 SKSYTVLGM-------FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
S V+ F +R YD + S+ A+ F ++ ++ +E+ +K
Sbjct: 183 PASGFVVDSLLSPGVVFSVRQAKYDQRYILTSVSFARNLFGMQGMLTALELKLKPNANTA 242
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + I ++GN V D ++ + F
Sbjct: 243 EVKKKIQTLVGNKYKVRDRYEQQEDTFRIM 272
>gi|152979094|ref|YP_001344723.1| outer membrane-specific lipoprotein transporter subunit LolE
[Actinobacillus succinogenes 130Z]
gi|150840817|gb|ABR74788.1| lipoprotein releasing system, transmembrane protein LolE
[Actinobacillus succinogenes 130Z]
Length = 412
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 53/263 (20%), Positives = 112/263 (42%), Gaps = 3/263 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY + +KN +S+ SF S +G+ +GVM LI+ +S MNGF ++ R+L + H
Sbjct: 4 PFFISWRYQRAKQKNRLVSLISFFSTLGIALGVMVLIIGLSAMNGFERELNNRILAVVPH 63
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
I V + + I+ + + + V V+G+ + +
Sbjct: 64 AEITAADENTVQDAGLLEKRLQTVPQIQGVSPFVSFTALIENGAKMKVVQVKGVDKTAQN 123
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ + + +F + G+++G +A L + GD + +L + M R +
Sbjct: 124 KVSSLGKFVLDDGWTNFGKNGGLVLGYAIANELDVHEGDWVTLLISQNNGDEMAQPARER 183
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHENIVR 246
+ D+ M +AQ + L N VSG+E+ V++P ++ +++
Sbjct: 184 --IQVSGILRLDGQLDHSYALMPKAQAQEFLGLTINQVSGVELKVQNPFHMQNMDYSVLN 241
Query: 247 ILGNGVVVIDWQQRYQIFFSCYE 269
+ + +WQ ++ + +
Sbjct: 242 DYPQLLNLQNWQAKFGYMYRDIQ 264
>gi|300725870|ref|ZP_07059334.1| putative membrane protein [Prevotella bryantii B14]
gi|299776858|gb|EFI73404.1| putative membrane protein [Prevotella bryantii B14]
Length = 409
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 50/272 (18%), Positives = 98/272 (36%), Gaps = 8/272 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RYLFS + I+I S IS +GV + AL++V+SV NGF + +
Sbjct: 1 MNFPFFIARRYLFSKKSTHAINIISAISVVGVAVATTALVIVLSVFNGFHDLVASLFTSF 60
Query: 65 NGHVVIQQKYYPLVDYQFIA-NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ + + V ++ +P + + QA + + N
Sbjct: 61 DPQLTVVPVTGKTVPNDDPILTQIKALPQIDIASETIEDQALAVYNNKQAMVTVKGVEDN 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD------- 176
G + +IG LA++LG +
Sbjct: 121 FSDLTHIKEILYGDGEYELHAANLQYGVIGIRLAQDLGTGAKWNGYLKIYAPQREGQLDM 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
G + + +F ++ YD G + S++ A+ F + +S +E+ +K
Sbjct: 181 SNLDGGFVVDSLISPGVVFSVKQSKYDAGYILTSIEFARNLFGQQGMLSALELRLKPGSD 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
++ I ++ G+ V+D ++ + F
Sbjct: 241 LDAVKMKIQQLAGDKYRVMDRFEQQEDTFKIM 272
>gi|94676859|ref|YP_588865.1| lipoprotein releasing system, transmembrane protein LolE [Baumannia
cicadellinicola str. Hc (Homalodisca coagulata)]
gi|94220009|gb|ABF14168.1| lipoprotein releasing system, transmembrane protein LolE [Baumannia
cicadellinicola str. Hc (Homalodisca coagulata)]
Length = 415
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 47/267 (17%), Positives = 101/267 (37%), Gaps = 2/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNR-KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+ + +A R+ + + +SI + IS I + +GVM LI+V+SV+NGF ++ +R+
Sbjct: 1 MRIPLSLQIALRFHRKQQNRKGMVSIIAMISTISISLGVMVLIIVLSVINGFERELNQRI 60
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
L + H I+ P ++ + ++ +P +I P++ + + + + V+ +
Sbjct: 61 LAVVAHGEIEPVNPPFDNWLTLIKSIEQMPGIIAATPYIHFNSIIE-SAEKQQVIQVKAV 119
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
L + + N ++F K II + +
Sbjct: 120 DPEQEKRLSSLPNFMLNNAWHNFVAHKQQIILGKGIATTLHVKPGDWLTMVISHADVDIN 179
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ + DN + L +AQ Y N + + GI + V D +
Sbjct: 180 RLQFKRIRLQVSGIFALSSQIDNHFALIPLADAQEYLNKGDDIDGIAMKVNDIYHANQII 239
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + + V + W + Y +
Sbjct: 240 RYVGKNINRSVFIRSWIETYGYMYRDI 266
>gi|52425240|ref|YP_088377.1| outer membrane-specific lipoprotein transporter subunit LolE
[Mannheimia succiniciproducens MBEL55E]
gi|52307292|gb|AAU37792.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 413
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 55/263 (20%), Positives = 107/263 (40%), Gaps = 2/263 (0%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY + +KN +S+ + S IG+ +GV LI+ +S MNGF ++ R+L + H
Sbjct: 4 PFFISWRYQRTKQKNRLVSLIALFSSIGIALGVAVLILGLSAMNGFERELNNRILAVVPH 63
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
I ++ + R IK + + + V V G+ +
Sbjct: 64 SDITAYQDGRINDRQDLERRLMANSDIKAVSPYVSFTALVENGAKLKVVQVHGVDHKMLD 123
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ + N F G+++G +AR+L +S GD + +L +
Sbjct: 124 NVSSLGKFVLNNGWQQFAERGGLVLGSGIARDLDVSEGDWVTLLISQNTDGDQLSQPARE 183
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHENIVR 246
V G+ R D+ + L AQ + +N +SGIE+ V DP +++ + +
Sbjct: 184 RVQVTGILR-LDGQLDHSYALIPLATAQEFLGFAKNEISGIEMKVADPFKVQQLNFANLN 242
Query: 247 ILGNGVVVIDWQQRYQIFFSCYE 269
+ + W ++ + +
Sbjct: 243 DYPQMLNLQTWINKFGYMYRDIQ 265
>gi|288928932|ref|ZP_06422778.1| membrane protein [Prevotella sp. oral taxon 317 str. F0108]
gi|288329916|gb|EFC68501.1| membrane protein [Prevotella sp. oral taxon 317 str. F0108]
Length = 409
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 51/270 (18%), Positives = 98/270 (36%), Gaps = 8/270 (2%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+ +A RYLFS + I++ S IS +GV + MAL++V+SV NGF + + +
Sbjct: 3 VSLFIARRYLFSKKSTNAINVISAISVVGVAVATMALVIVLSVFNGFHDLVASLFTAFDP 62
Query: 67 HVVIQQKYYPLVDYQFI-ANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+ + ++ +P+V V A V + N
Sbjct: 63 QIEVVPAKGKDAPTDDPVLTQIKQLPEVDVATECVEDNALVFYGDKQAMVTIKGVDDNFT 122
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
N G + + ++G LA+ LG + +
Sbjct: 123 QLTRINDLLYGDGEFALRAANLQYGVLGIRLAQQLGTGARWNGFMRVFAPNREGQFDISN 182
Query: 186 SKSYTVLGM-------FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
S V+ F +R YD + S+ A+ F ++ ++ +E+ +K +
Sbjct: 183 PTSGFVVDSLLSPGVVFSVRQAKYDQRYILTSVSFARNLFGMQGMLTALELKLKPNANTD 242
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + I I G+ V+D ++ + F
Sbjct: 243 EVKKKIQTIAGSKYKVLDRYEQQEDTFRIM 272
>gi|37526702|ref|NP_930046.1| outer membrane-specific lipoprotein transporter subunit LolE
[Photorhabdus luminescens subsp. laumondii TTO1]
gi|36786134|emb|CAE15186.1| Lipoprotein releasing system transmembrane protein lolE
[Photorhabdus luminescens subsp. laumondii TTO1]
Length = 415
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 54/264 (20%), Positives = 109/264 (41%), Gaps = 1/264 (0%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
++ A R+ R+ +S+ S IS +G+M+GV LI+ +S MNGF ++ R+L +
Sbjct: 5 PLSLVTALRFSRGRRRGGMVSLISVISTLGIMLGVAVLIIGLSAMNGFERELRNRILSVV 64
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
H I + P +Q R+ V+ P+++ + +S + + ++
Sbjct: 65 PHGEIYTVHQPFEQWQPALERVKNTTGVVAASPYITFTGLMEKGASLHAVQVRGVDLATE 124
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
N + VI+G+ +A L + GD + ++ P D + +
Sbjct: 125 SQVSSLPQFVQDNVWQNFQAGHQQVILGQGVANALKVKQGDWLTVMIPNNDPEMKLLQPK 184
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
V G+F+ D+ + + L +AQ Y + ++GI + V D A ++ +
Sbjct: 185 RIRLQVSGIFQ-LSGLLDHSLALVPLADAQQYLDYGQGITGIAIKVDDVFAADQRVRSAG 243
Query: 246 RILGNGVVVIDWQQRYQIFFSCYE 269
V + W + Y + +
Sbjct: 244 EASQEYVYISSWIRNYGYMYHDIQ 267
>gi|307256013|ref|ZP_07537801.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 10 str. D13039]
gi|306865435|gb|EFM97330.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 10 str. D13039]
Length = 390
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 44/261 (16%), Positives = 97/261 (37%), Gaps = 13/261 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A+RY S + F + + ++ G+++GVMAL++V+SVMNG + +L H
Sbjct: 6 LFIAFRYWRSKSADRFGRLVTNLASFGIVLGVMALVIVLSVMNGLENMQKRNLLSTLPHA 65
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
++ + Q ++ V V Q+ + G +
Sbjct: 66 IVLPQEGHFDKNQSLSLPAFASKSVAINKANVIIQS---------QQGINAGQLLGVENE 116
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ + V+IG LA L I G+KI ++ + +
Sbjct: 117 SDDPMLIGEAVKTLLPQGEFNVLIGSRLANKLNIGTGEKIRLMITENSQYTPIGRVPVQR 176
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ + ++ +L + + E+ V G+ ++++DP + + +
Sbjct: 177 LFNVAGIYHTNNEASEYTLFANLADVGRLLRITEDQVQGMRLYLQDPFQVTELSQYFNA- 235
Query: 248 LGNGVVVIDWQQRYQIFFSCY 268
+ + DW+++ FF
Sbjct: 236 --DSYKISDWREQKGEFFQAV 254
>gi|299142406|ref|ZP_07035538.1| membrane protein [Prevotella oris C735]
gi|298576128|gb|EFI48002.1| membrane protein [Prevotella oris C735]
Length = 414
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 47/273 (17%), Positives = 91/273 (33%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F + VA RYLFS + I++ S IS IGV + MAL++V+SV NGF + +
Sbjct: 1 MNFPLYVARRYLFSKKSTNAINVISVISVIGVAVATMALVIVLSVFNGFHDLVATFFTNF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + + + V ++ + V+V+G+ ++
Sbjct: 61 DPQLEVVPTQGKTAPSDDPLLAKMKALPEVDVATESVEDQALAIYQDHQAMVIVKGVDDN 120
Query: 125 DFSYLQNSFSRFYGNVSNDF-----DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
F + G+ + L +I G
Sbjct: 121 FDQLTHIKDILFGDGTYSLHAGNLQYGIMGIRLAAALGTGARFGDYLRIYAPQKEGQFDA 180
Query: 180 MGMGIRSKSY---TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
+ +F + YD + + A+ F + +S +E +KD
Sbjct: 181 TNPSEAFVVDSLLSPGVVFSVNQSKYDKNYIIAPIAFARNLFGQQGRLSSLEFRLKDGSD 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ + + I G V+D ++ F +
Sbjct: 241 LDAVKKEMQEIGGTKYKVMDRFEQQADTFKIMQ 273
>gi|307253748|ref|ZP_07535602.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|307258205|ref|ZP_07539948.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 11 str. 56153]
gi|306863232|gb|EFM95172.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|306867665|gb|EFM99510.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 11 str. 56153]
Length = 390
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 45/261 (17%), Positives = 99/261 (37%), Gaps = 13/261 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A+RY S + F + + ++ G+++GVMAL++V+SVMNG + +L H
Sbjct: 6 LFIAFRYWRSKSADRFGRLVTNLASFGIVLGVMALVIVLSVMNGLENMQKRNLLSTLPHA 65
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
++ + Q ++ V V Q+ + G +
Sbjct: 66 IVLPQEGHFDKNQSLSLPAFASKSVAINKANVIIQS---------QQGINAGQLLGVENE 116
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ + V+IG LA L I G+KI ++ + +
Sbjct: 117 SDDPMLIGEDVKTLLPQGEFNVLIGSRLANKLNIGTGEKIRLMITENSQYTPMGRVPVQR 176
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ + ++ +L + + E+ V G+ ++++DP + + +++
Sbjct: 177 LFNVVGIYHTNNEASEYTLFANLADVGRLLRITEDQVQGMRLYLQDPFQVTELNQHFDA- 235
Query: 248 LGNGVVVIDWQQRYQIFFSCY 268
N + DW+++ FF
Sbjct: 236 --NNYKISDWREQKGEFFQAV 254
>gi|322380255|ref|ZP_08054476.1| lipoprotein release system transmembrane protein [Helicobacter suis
HS5]
gi|321147333|gb|EFX42012.1| lipoprotein release system transmembrane protein [Helicobacter suis
HS5]
Length = 411
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 60/270 (22%), Positives = 109/270 (40%), Gaps = 5/270 (1%)
Query: 3 IFSRFEV--IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+F + + RYL ++ FISI + ++F+GV +GVM LIV M++MNG ++ +
Sbjct: 2 MFKPSSLAVFLVRRYLRFDKTQPFISITALLAFLGVGVGVMVLIVAMAIMNGMGKEFENK 61
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ +N + + Q L+ + PF+ Q G+L
Sbjct: 62 LFVMN-YPLTLYATSYYGIDQKTVIALEQRFPHLIFSPFLQAQVMARFNGMLSGGMLFGV 120
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ GNV ++ GK +L ++ KI++ + T
Sbjct: 121 NIKQEVRINHILKKGLEGNVKTFMQTPFNLVAGKGFKESLMLAEAHKIDLFFTKLEPTGF 180
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAV-SGIEVFVKD-PDAIE 238
+ K + + G F YD +Y ++Q + +L + G+ V+ KD +E
Sbjct: 181 VLSPTMKRFNLQGYFESGLKAYDGSYLYTNIQALRAIRDLPEGIYDGVHVYSKDAMKDLE 240
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + + I NGV + W Q+ FFS
Sbjct: 241 RIKQALKSIPNNGVGIEGWWQQNGNFFSAM 270
>gi|261346026|ref|ZP_05973670.1| lipoprotein releasing system, transmembrane protein LolC
[Providencia rustigianii DSM 4541]
gi|282565911|gb|EFB71446.1| lipoprotein releasing system, transmembrane protein LolC
[Providencia rustigianii DSM 4541]
Length = 387
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 61/254 (24%), Positives = 109/254 (42%), Gaps = 7/254 (2%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
+ + F S +S IG+ +GV ALI V SVMNGF + +L ++
Sbjct: 1 MRGRAVDKFGRFVSSLSAIGITLGVAALITVTSVMNGFERSLQDSILAYMPQAILTSSAG 60
Query: 76 PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSR 135
+ Q+ L + V K+ P V + ++ G GV+ S+ L
Sbjct: 61 NIDPKQYPITDLQHLQGVKKIEPIVQSDVVLQSRTNVGVGVMAGINSDESSLLLDK---L 117
Query: 136 FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSP-YGDVTPMGMGIRSKSYTVLGM 194
G+ ++ D V +GK LA LG+ G+ I ++ P +TPMG + +TV G+
Sbjct: 118 ISGDRNDLIDGRYNVFLGKRLAETLGVKRGEDIRLIIPGVSQLTPMGRIPSQRLFTVAGI 177
Query: 195 FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVV 254
F+ + ++ A++ ++G +++ +P ++ E I L G++
Sbjct: 178 FQTNGEADTSELIVAQADAARMLRYPAGNITGWRLYLDEPLKVDVLSEQI---LPKGLIW 234
Query: 255 IDWQQRYQIFFSCY 268
DW++R FF
Sbjct: 235 TDWRERKGEFFQAV 248
>gi|322378911|ref|ZP_08053327.1| lipoprotein release system transmembrane protein [Helicobacter suis
HS1]
gi|321148653|gb|EFX43137.1| lipoprotein release system transmembrane protein [Helicobacter suis
HS1]
Length = 411
Score = 110 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 60/270 (22%), Positives = 109/270 (40%), Gaps = 5/270 (1%)
Query: 3 IFSRFEV--IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+F + + RYL ++ FISI + ++F+GV +GVM LIV M++MNG ++ +
Sbjct: 2 MFKPSSLAVFLVRRYLRFDKTQPFISITALLAFLGVGVGVMVLIVAMAIMNGMGKEFENK 61
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ +N + + Q L+ + PF+ Q G+L
Sbjct: 62 LFVMN-YPLTLYATSYYGIDQKTVIALEQRFPHLIFSPFLQAQVMARFNGMLSGGMLFGV 120
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ GNV ++ GK +L ++ KI++ + T
Sbjct: 121 NIKQEVRINHILKKGLEGNVKTFMQTPFNLVAGKGFKESLMLAEAHKIDLFFTKLEPTGF 180
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAV-SGIEVFVKD-PDAIE 238
+ K + + G F YD +Y ++Q + +L + G+ V+ KD +E
Sbjct: 181 VLSPTMKRFNLQGYFESGLKAYDGSYLYTNIQALRAIRDLPEEIYDGVHVYSKDAMKDLE 240
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + + I NGV + W Q+ FFS
Sbjct: 241 RIKQALKSIPNNGVGIEGWWQQNGNFFSAM 270
>gi|223041843|ref|ZP_03612031.1| lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus minor 202]
gi|223017336|gb|EEF15759.1| lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus minor 202]
Length = 390
Score = 110 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 50/266 (18%), Positives = 92/266 (34%), Gaps = 13/266 (4%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ +A+RY + + F + + ++ G+++GVMALI+++SVMNG + +L
Sbjct: 1 MNLTPFFIAFRYWRAKSADRFGRLVTNLASFGIVLGVMALIIMLSVMNGLENMQKRNLLS 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
H VI Q + I V V Q+ + G
Sbjct: 61 TLPHAVISPLEGHFSKTQQLTLPEFVIKQVPINRTNVMIQS---------QQGINAGQLI 111
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ V+IG LA L I +GDKI ++
Sbjct: 112 GVEQEHDDPLLTGENITQLLPQGEFNVLIGSRLADKLNIGVGDKIRLMITENSQYTPMGR 171
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHE 242
+ + + + ++ +L + + E+ V GI +F+ DP + +
Sbjct: 172 VPVQRLFHISGIYYSNNEASEYTLFANLADVGRLLRITEDQVQGIRLFLTDPFKVTELPL 231
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCY 268
V DW+++ FF
Sbjct: 232 YFDE---TQYQVSDWREQKGEFFQAV 254
>gi|190151394|ref|YP_001969919.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 7 str. AP76]
gi|189916525|gb|ACE62777.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 7 str. AP76]
Length = 390
Score = 110 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 45/261 (17%), Positives = 99/261 (37%), Gaps = 13/261 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A+RY S + F + + ++ G+++GVMAL++V+SVMNG + +L H
Sbjct: 6 LFIAFRYWRSKSADRFGRLVTNLASFGIVLGVMALVIVLSVMNGLENMQKRNLLSTLPHA 65
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
++ + Q P + S + + + G +
Sbjct: 66 IVLPQEGHFDKNQ---------PLNLPAFASKSVAINKANVIIQSRQGINAGQLLGVENE 116
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ + V+IG LA L IS G+KI ++ + +
Sbjct: 117 SDDPMLFGENVKALLPQGEFNVLIGSRLANKLNISTGEKIRLMITENSQYTPMGRVPVQR 176
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ + ++ +L + + E+ V G+ ++++DP + + +++
Sbjct: 177 LFNVVGIYHSNNEASEYTLFANLADVGRLLRITEDQVQGMRLYLQDPFQVTELNQHFDA- 235
Query: 248 LGNGVVVIDWQQRYQIFFSCY 268
N + DW+++ FF
Sbjct: 236 --NNYKISDWREQKGEFFQAV 254
>gi|219871779|ref|YP_002476154.1| outer membrane-specific lipoprotein transporter subunit LolE
[Haemophilus parasuis SH0165]
gi|219691983|gb|ACL33206.1| outer membrane-specific lipoprotein transporter subunit LolE
[Haemophilus parasuis SH0165]
Length = 416
Score = 110 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 54/265 (20%), Positives = 104/265 (39%), Gaps = 3/265 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY +KN +S+ S S +G+ +GV LI+ +S MNGF ++ +RVL + H
Sbjct: 4 PFFISWRYQRGKQKNRLVSLISLFSSVGIALGVAVLIIGLSAMNGFERELNQRVLSVVPH 63
Query: 68 VVIQQKYYPLVDYQ---FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
I + + L + S VRGI +
Sbjct: 64 AEIMAYNESKSATIVQGDRLENIVKDTPNVTALSPFVSFTGLIENGSQLKIAQVRGIDPT 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + F + G+I+G +AR+L I++GD++ +L P+
Sbjct: 124 KQEQVSRLAQFIPQDQWQAFKQEGGLILGAGIARSLDINVGDEVTLLLPHPTDDGKLAQP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
S TV G+ R+ + + + +L + +GIE+ VK P + +
Sbjct: 184 LRFSLTVTGILRLDGQLDHSYALLPIAKAQELLELKPSQYTGIELAVKQPFQVREITFPE 243
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + W ++ ++ +
Sbjct: 244 LANYPQQLYMQTWIDKFGYMYNDIQ 268
>gi|281421509|ref|ZP_06252508.1| putative membrane protein [Prevotella copri DSM 18205]
gi|281404581|gb|EFB35261.1| putative membrane protein [Prevotella copri DSM 18205]
Length = 409
Score = 110 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 47/272 (17%), Positives = 99/272 (36%), Gaps = 8/272 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RYLFS + I++ S IS IGV + MAL++V+SV NGF + +
Sbjct: 1 MNFPFFIARRYLFSKKSTHVINVISSISVIGVAVATMALVIVLSVFNGFHDLVASLFTSF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + + + + V ++ + + V ++G+ ++
Sbjct: 61 DPQLKVVPVEGKTAPADDPILTKIRLLPQVDVATETVEDQALAIYNDHQAMVKIKGVDDN 120
Query: 125 DFSYLQNSFSRFYGNVSNDF-----DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + + G+ + ++L KI G +
Sbjct: 121 FAELSHITDILYGDGSFSLHAANLEYGTVGIRLAQNLGIGAQWDGFLKIYAPKKEGQLDM 180
Query: 180 MGMGIRSKSYTVLGM---FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
G ++ F ++ YD + S+ A+ F + +S +E+ +K
Sbjct: 181 TNPGDGFVVDSLNSPGVLFAVKQAKYDKNYIITSISFARNLFGQQGMLSDLELRLKPGSN 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
++ + +I GN V+D ++ + F
Sbjct: 241 LDAVKAEMQQIAGNKYKVLDRFEQQEDTFKIM 272
>gi|165977485|ref|YP_001653078.1| lipoprotein releasing system transmembrane protein [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|165877586|gb|ABY70634.1| lipoprotein releasing system transmembrane protein [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
Length = 390
Score = 110 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 44/261 (16%), Positives = 97/261 (37%), Gaps = 13/261 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A+RY S + F + + ++ G+++GVMAL++V+SVMNG + +L H
Sbjct: 6 LFIAFRYWRSKSADRFGRLVTNLASFGIVLGVMALVIVLSVMNGLENMQKRNLLSTLPHA 65
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
++ + Q ++ V V Q+ + G +
Sbjct: 66 IVLPQEGHFDKNQSLSLPAFASKSVAINKANVIIQS---------RQGINAGQLLGVENE 116
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ + V+IG LA L I G+KI ++ + +
Sbjct: 117 SDDPMLIGEDVKTLLPQGEFNVLIGSRLANKLNIGTGEKIRLMITENSQYTPMGRVPVQR 176
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ + ++ +L + + E+ V G+ ++++DP + + +
Sbjct: 177 LFNVVGIYHTNNEASEYTLFANLADVGRLLRITEDQVQGMRLYLQDPFQVTELSQYFNA- 235
Query: 248 LGNGVVVIDWQQRYQIFFSCY 268
+ + DW+++ FF
Sbjct: 236 --DSYKISDWREQKGEFFQAV 254
>gi|167041423|gb|ABZ06175.1| putative Predicted permease [uncultured marine microorganism
HF4000_006O13]
Length = 408
Score = 110 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 67/264 (25%), Positives = 124/264 (46%), Gaps = 15/264 (5%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A+R LFS +++ FISI +FIS + + +GV +LIVV+SVMNGF+ ++ +RV+ ++ H
Sbjct: 5 LFIAYRQLFSKQQSQFISIVTFISILAIALGVSSLIVVLSVMNGFQAEIEERVIRLSSH- 63
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ Q P+ +Q I N L+ P++ +PFV + +S ++
Sbjct: 64 ITIQSDQPIRRWQSIVNELEQFPEIKHTIPFVEAKGIISNGQESKGALITGINPAD---- 119
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
F+ + +I+G+ +A L + GD+ + P ++ S+
Sbjct: 120 ------EFFFGIKLKDLENGELILGRGIALQLNLRAGDQAQLTVPSMNLQGKISFPDSQY 173
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ + + YD+ V M L +A L NAV+GI V + + ++ + I L
Sbjct: 174 FRIKEVVEFGLQRYDSSQVVMHLVDASSLLGLGNAVNGISVELGNVYQVKSMVKEIESSL 233
Query: 249 ----GNGVVVIDWQQRYQIFFSCY 268
G + + DW ++ Q F
Sbjct: 234 KKIKGLEITITDWSKQNQALFDAI 257
>gi|307260443|ref|ZP_07542138.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 12 str. 1096]
gi|306869846|gb|EFN01628.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 12 str. 1096]
Length = 390
Score = 110 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 44/261 (16%), Positives = 97/261 (37%), Gaps = 13/261 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A+RY S + F + + ++ G+++GVMAL++V+SVMNG + +L H
Sbjct: 6 LFIAFRYWRSKSADRFGRLVTNLASFGIVLGVMALVIVLSVMNGLENMQKRNLLSTLPHA 65
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
++ + Q ++ V V Q+ + G +
Sbjct: 66 IVLPQEGHFDKNQSLSLPAFASKSVAINKANVIIQS---------QQGINAGQLLGVENE 116
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ + V+IG LA L I G+KI ++ + +
Sbjct: 117 SDDPMLIGEAVKTLLPQGEFNVLIGSRLANKLNIGTGEKIRLMITENSQYTPIGRVPVQR 176
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ + ++ +L + + E+ V G+ ++++DP + + +
Sbjct: 177 LFNVAGIYHTNNEASEYTLFANLADVGRLLRITEDQVQGMRLYLQDPFQVTELSQYFNA- 235
Query: 248 LGNGVVVIDWQQRYQIFFSCY 268
+ + DW+++ FF
Sbjct: 236 --DSYKISDWREQKGEFFQAV 254
>gi|319900774|ref|YP_004160502.1| hypothetical protein Bache_0899 [Bacteroides helcogenes P 36-108]
gi|319415805|gb|ADV42916.1| protein of unknown function DUF214 [Bacteroides helcogenes P
36-108]
Length = 412
Score = 110 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 57/273 (20%), Positives = 103/273 (37%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+A RYLFS +K+ I+I S IS GV + +AL+ +SV NGF++ +
Sbjct: 1 MNLPFYIARRYLFSKKKHNAINIISGISVCGVALATLALVCTLSVFNGFQDMVAGFFTAF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + I + + + A R I V + + + +V+G+ ++
Sbjct: 61 DPELKITVREGKVFEPNSAAFRQVRSFSEIAVWTETLEENAMVQYKDRQTMAVVKGVDDN 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVII---GKDLARNLGISIGDKINILSPYGDV---- 177
+ D I GI D + + +P +V
Sbjct: 121 FEQLTSIDSLLYGTGKFILHDADVDYGILGVELISELGTGIQFVDPLQVYAPKRNVRVNM 180
Query: 178 -TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
P R ++ +F + YD + S+ A+ F+ + VS +E+ +K
Sbjct: 181 ANPSASFNRDYLFSPGAVFVVNQQKYDARYILTSIGFARRLFDYDTEVSAVELKLKPGAD 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
I I RILG+G +V + ++ F E
Sbjct: 241 ITSVRNRITRILGDGFLVQNRYEQQADVFRIME 273
>gi|307244794|ref|ZP_07526893.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|306854239|gb|EFM86445.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
Length = 390
Score = 110 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 45/261 (17%), Positives = 99/261 (37%), Gaps = 13/261 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A+RY S + F + + ++ G+++GVMAL++V+SVMNG + +L H
Sbjct: 6 LFIAFRYWRSKSADRFGRLVTNLASFGIVLGVMALVIVLSVMNGLENMQKRNLLSTLPHA 65
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
++ + Q ++ V V Q+ + G +
Sbjct: 66 IVLPQEGHFDKNQSLSLPAFASKSVAINKANVIIQS---------QQGINAGQLLGVENE 116
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ + V+IG LA L I G+KI ++ + +
Sbjct: 117 SDDPMLIGEDVKTLLPQGEFNVLIGSRLANKLNIGTGEKIRLMITENSQYTPMGRVPVQR 176
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ + ++ +L + + E+ V G+ ++++DP + + +++
Sbjct: 177 LFNVVGIYHSNNEASEYTLFANLADVGRLLRITEDQVQGMRLYLQDPFQVTELNQHFDA- 235
Query: 248 LGNGVVVIDWQQRYQIFFSCY 268
N + DW+++ FF
Sbjct: 236 --NNYKISDWREQKGEFFQAV 254
>gi|332173697|gb|AEE22951.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Glaciecola agarilytica 4H-3-7+YE-5]
Length = 411
Score = 110 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 41/270 (15%), Positives = 83/270 (30%), Gaps = 7/270 (2%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + +AWR+ S ++N +IS S S +G+ +G LI+++SVMNGF ++ R
Sbjct: 1 MKLI----FQLAWRFRSSKQQNGYISFISASSTVGIALGCFVLILLLSVMNGFERELKDR 56
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+L I H + + + ++ L G +
Sbjct: 57 LLSIIPHGEL--YAVGKQGITDWQKEIAALEKDARIESIQPYTKATGMLQKGKKMKAIEL 114
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + + + I + ++
Sbjct: 115 VGIDPQFAENDGMLSSVAKQQWQTFSNDPQGVLLGAGAMDKLGIELGDKVKLLLPQLSDD 174
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMV-YMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
K+ + + ++ + + YM L A + + V G+ DP A
Sbjct: 175 LSIRAPKTLWLNVLGEVKIGGELDNHIGYMHLPLASKTLGVTHGVQGLRFRYHDPFAAPL 234
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
I V + DW + + +
Sbjct: 235 ITREIGFGFSQEVYMSDWTRTQGHLYQDIQ 264
>gi|307249191|ref|ZP_07531188.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 4 str. M62]
gi|306858715|gb|EFM90774.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 4 str. M62]
Length = 390
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 45/261 (17%), Positives = 99/261 (37%), Gaps = 13/261 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A+RY S + F + + ++ G+++GVMAL++V+SVMNG + +L H
Sbjct: 6 LFIAFRYWRSKSADRFGRLVTNLASFGIVLGVMALVIVLSVMNGLENMQKRNLLSTLPHA 65
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
++ + Q ++ V V Q+ + G +
Sbjct: 66 IVLPQEGHFDKNQSLSLPAVASKSVAINKANVIIQS---------QQGINAGQLLGVENE 116
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ + V+IG LA L I G+KI ++ + +
Sbjct: 117 SDDPMLIGEDVKTLLPQGEFNVLIGSRLANKLNIGTGEKIRLMITENSQYTPMGRVPVQR 176
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ + ++ +L + + E+ V G+ ++++DP + + +++
Sbjct: 177 LFNVVGIYHTNNEASEYTLFANLADVGRLLRITEDQVQGMRLYLQDPFQVTELNQHFDA- 235
Query: 248 LGNGVVVIDWQQRYQIFFSCY 268
N + DW+++ FF
Sbjct: 236 --NNYKISDWREQKGEFFQAV 254
>gi|229847129|ref|ZP_04467234.1| adenosylmethionine--8-amino-7-oxononanoate transaminase
[Haemophilus influenzae 7P49H1]
gi|229809958|gb|EEP45679.1| adenosylmethionine--8-amino-7-oxononanoate transaminase
[Haemophilus influenzae 7P49H1]
Length = 393
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 105/267 (39%), Gaps = 12/267 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +A RY + + F + + ++ +G+++GVMALI+V+SVMNG ++VL
Sbjct: 1 MNFPISFYIALRYWRAKSADRFGRLVTNLASLGIVLGVMALIIVLSVMNGLENYQKQQVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H ++ + L+ +P ++ ++ + + G S + GI
Sbjct: 61 SSIPHAIVSEDQPI-----STEKTLENLPHFVQKAVPINTTNVIYQTTKGVSAGQIIGIQ 115
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ L +SF + N ++IG LA+ LG++IGDKI ++
Sbjct: 116 SFSDDPLVDSFEQTKFNEI-LPSGEFKLVIGDQLAQKLGMNIGDKIRLMITENSQYTPFG 174
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
+ + + + + + ++ + + G +F+ DP I
Sbjct: 175 RVPMQRLFTVSDIYYDYGEASGYEAFANITDIGRLMRIQPQQAQGYRLFLNDPFQI---- 230
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + + DW+ + FF
Sbjct: 231 TELPQYFPTQ-KITDWRVQKGEFFQAV 256
>gi|329956558|ref|ZP_08297155.1| efflux ABC transporter, permease protein [Bacteroides clarus YIT
12056]
gi|328524455|gb|EGF51525.1| efflux ABC transporter, permease protein [Bacteroides clarus YIT
12056]
Length = 410
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 55/273 (20%), Positives = 104/273 (38%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+A RYLFS +K+ I+I S IS GV + +AL+ +SV NGF++ +
Sbjct: 1 MNLPFFIARRYLFSKKKHNAINIISGISVCGVALATLALVCTLSVFNGFQDMVAGFFTAF 60
Query: 65 NGH-VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ + ++ + ++ +P++ + A V V+ N
Sbjct: 61 DPELKITVREGKVFDPLESRVQQVRALPEIDIWTETLEENAMVQYKDRQAMAVIKGVEDN 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARN--LGISIGDKINILSPYGDV---- 177
+ +S G + +G +L GI D + + +P +V
Sbjct: 121 FEQLTSIDSLLYGTGEFILNDSVVDYGFMGVELVSELGTGIQFVDPLRVYAPKRNVRVNI 180
Query: 178 -TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
P + ++ +F + YD + SL A+ FN + VS IE+ +K
Sbjct: 181 ANPSAAFNQDYLFSPGAVFVVNQQKYDARYILTSLSFARRLFNYDTEVSAIELKLKPGSN 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + R+LG+ V + ++ F E
Sbjct: 241 TNAVQKKMERMLGDRFTVQNRYEQQADVFRIME 273
>gi|282879082|ref|ZP_06287842.1| efflux ABC transporter, permease protein [Prevotella buccalis ATCC
35310]
gi|281298816|gb|EFA91225.1| efflux ABC transporter, permease protein [Prevotella buccalis ATCC
35310]
Length = 411
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 48/273 (17%), Positives = 103/273 (37%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F + VA RYLFS + I++ S IS IGV + MAL++VMSV NGF + + +
Sbjct: 1 MNFPLFVARRYLFSKKSTNAINVISIISMIGVAVATMALVIVMSVFNGFHDLVASFLTNF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + + + + V ++ + V ++G+ ++
Sbjct: 61 DPQLEVVPTEGKSANANDPLLTKVKQLRQVDVATENVEDMAMAMYGDKLTMVTIKGVDDN 120
Query: 125 DFSYLQNSFSRFYGNVSNDF-----DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ G+ + + L + KI G +
Sbjct: 121 FDKLTHIKEILYGDGEYELHAGNLEYGIIGIRLAQTLDVGATWNGYLKIYAPKRSGQLDM 180
Query: 180 MGMGIRSKSY---TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
+ +F + YD G + S++ A+ F+++ +S +E+ +++
Sbjct: 181 SNPASGFAVDSLLSPGVVFSVNQARYDKGHILTSIEFARNLFDMKGRISSLELRLQENCN 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+++ + I I+G+ V+D ++ F +
Sbjct: 241 LKEVKKEIQAIVGSRYKVLDRFEQQADTFKIMQ 273
>gi|16273455|ref|NP_439704.1| hypothetical protein HI1555 [Haemophilus influenzae Rd KW20]
gi|68249930|ref|YP_249042.1| lipoprotein releasing system transmembrane protein [Haemophilus
influenzae 86-028NP]
gi|145631797|ref|ZP_01787557.1| adenosylmethionine--8-amino-7-oxononanoate transaminase
[Haemophilus influenzae R3021]
gi|260580336|ref|ZP_05848165.1| lipoprotein releasing system, transmembrane protein LolE
[Haemophilus influenzae RdAW]
gi|1175892|sp|P44252|LOLC_HAEIN RecName: Full=Lipoprotein-releasing system transmembrane protein
lolC
gi|1574399|gb|AAC23204.1| conserved hypothetical transmembrane protein [Haemophilus
influenzae Rd KW20]
gi|68058129|gb|AAX88382.1| lipoprotein releasing system transmembrane protein [Haemophilus
influenzae 86-028NP]
gi|144982587|gb|EDJ90137.1| adenosylmethionine--8-amino-7-oxononanoate transaminase
[Haemophilus influenzae R3021]
gi|260093013|gb|EEW76947.1| lipoprotein releasing system, transmembrane protein LolE
[Haemophilus influenzae RdAW]
Length = 393
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 106/267 (39%), Gaps = 12/267 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +A RY + + F + + ++ +G+++GVMALI+V+SVMNG ++VL
Sbjct: 1 MNFPISLYIALRYWRAKSADRFGRLVTNLASLGIVLGVMALIIVLSVMNGLEGYQKQQVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H ++ ++ L+ +P ++ ++ + + G S + GI
Sbjct: 61 SSIPHAIVSEEQPI-----STEKTLENLPHFVQKAVPINTTNVIYQTAKGVSAGQIIGIQ 115
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ L SF + N ++IG LA+ LG++IGDKI ++
Sbjct: 116 SFSDDPLVESFDQTKFNEI-LPRGEFKLVIGDQLAQKLGVNIGDKIRLMITENSQYTPFG 174
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
+ + + + + + ++ + + G +F+ DP I
Sbjct: 175 RVPMQRLFTVSDIYYGYGEASGYEAFANITDIGRLMRIQPQQAQGYRLFLNDPFQI---- 230
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + + DW+ + FF
Sbjct: 231 TELPQHFPTQ-KITDWRVQKGEFFQAV 256
>gi|330502575|ref|YP_004379444.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas mendocina NK-01]
gi|328916861|gb|AEB57692.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas mendocina NK-01]
Length = 385
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 55/237 (23%), Positives = 104/237 (43%), Gaps = 2/237 (0%)
Query: 33 FIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPD 92
+G+ +GVM +I+V+SVMNGF +M RVLG+ H ++ P+ D+ +A +++ P
Sbjct: 1 MLGLTLGVMVMILVLSVMNGFDHEMRTRVLGMIPHATVES-PTPVSDWPALARQVERHPR 59
Query: 93 VIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVII 152
V + PF Q ++ ++ + G++ + ++I
Sbjct: 60 VEALAPFTQMQGLLTHDGKVQKVLINAIDPEQERKVSIIDDFFQEGSLDSLQPGDFAMVI 119
Query: 153 GKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQ 212
G A LG+ +GDK+ ++P VTP GM R K +TV G+F + + D + ++
Sbjct: 120 GDKAAAKLGLKLGDKVTFVAPEVTVTPAGMFPRLKRFTVTGIFHVGAGEIDGALALANIS 179
Query: 213 EAQLY-FNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + V G+ + D ++ I + L DW + + +
Sbjct: 180 DLARLQRWKPDQVQGLRLKFDDLFQAPRSAWEIAQTLDGDFYARDWTRTHGNLYQAI 236
>gi|188534109|ref|YP_001907906.1| outer membrane-specific lipoprotein transporter subunit LolE
[Erwinia tasmaniensis Et1/99]
gi|188029151|emb|CAO97023.1| Lipoprotein releasing system transmembrane protein [Erwinia
tasmaniensis Et1/99]
Length = 414
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 49/256 (19%), Positives = 95/256 (37%), Gaps = 1/256 (0%)
Query: 14 RYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQK 73
R+ R+ +S+ S IS +G+ +GV LI+ +S MNGF ++ R+L + H I+
Sbjct: 12 RFSRGRRRGGMVSLISAISTVGIALGVAVLIIGLSAMNGFERELNHRILAVVPHGEIEPV 71
Query: 74 YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSF 133
P +Q + ++ +P V P+++ + S V V+G+ S L
Sbjct: 72 NQPFSGWQALLPKIAQVPGVAAAAPYINFTGLIESG-SKLQAVQVKGVDPQQESRLSALP 130
Query: 134 SRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLG 193
S G+ +F GK I+ + + + + +
Sbjct: 131 SYVQGDAWQNFAPGKQQILLGQGVADSLKLKQGDWLTIMIPNSDAGHKLLQPKRVRLQVA 190
Query: 194 MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVV 253
D+ + + L +AQ + + V+GI + DP + + V
Sbjct: 191 GVLKLSGMLDHSLALVPLDDAQRLLGMGDNVTGIAIKANDPFNAAALVRQAGEVTHSYVY 250
Query: 254 VIDWQQRYQIFFSCYE 269
+ W Y + +
Sbjct: 251 IRSWMGTYGYMYRDIQ 266
>gi|303251815|ref|ZP_07337986.1| lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|307249115|ref|ZP_07531122.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 2 str. S1536]
gi|302649245|gb|EFL79430.1| lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|306854403|gb|EFM86599.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 2 str. S1536]
Length = 390
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 45/261 (17%), Positives = 99/261 (37%), Gaps = 13/261 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A+RY S + F + + ++ G+++GVMAL++V+SVMNG + +L H
Sbjct: 6 LFIAFRYWRSKSADRFGRLVTNLASFGIVLGVMALVIVLSVMNGLENMQKRNLLSTLPHA 65
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
++ + Q ++ V V Q+ + G +
Sbjct: 66 IVLPQEGHFDKNQSLSLPAFASKSVAINKANVIIQS---------QQGINAGQLLGVENE 116
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ + V+IG LA L I G+KI ++ + +
Sbjct: 117 SDDPMLIGEDVKTLLPQGEFNVLIGSRLANKLNIGTGEKIRLMITENSQYTPMGRVPVQR 176
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ + ++ +L + + E+ V G+ ++++DP + + +++
Sbjct: 177 LFNVVGIYHSNNEASEYTLFANLADVGRLLRITEDQVQGMRLYLQDPFQVTELNQHFDA- 235
Query: 248 LGNGVVVIDWQQRYQIFFSCY 268
N + DW+++ FF
Sbjct: 236 --NNYKISDWREQKGEFFQAV 254
>gi|281425968|ref|ZP_06256881.1| putative membrane protein [Prevotella oris F0302]
gi|281399861|gb|EFB30692.1| putative membrane protein [Prevotella oris F0302]
Length = 414
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/273 (17%), Positives = 91/273 (33%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F + VA RYLFS + I++ S IS IGV + MAL++V+SV NGF + +
Sbjct: 1 MNFPLYVARRYLFSKKSTNAINVISVISVIGVAVATMALVIVLSVFNGFHDLVATFFTNF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + + + V ++ + V+V+G+ ++
Sbjct: 61 DPQLEVVPTQGKTAPSDDPLLAKMKALPEVDVATESVEDQALAIYQDHQAMVIVKGVDDN 120
Query: 125 DFSYLQNSFSRFYGNVSNDF-----DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
F + G+ + L +I G
Sbjct: 121 FDQLTHIKDILFGDGTYSLHAGNLQYGIMGIRLAAALGTGARFGDYLRIYAPQKEGQFDA 180
Query: 180 MGMGIRSKSY---TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
+ +F + YD + + A+ F + +S +E +KD
Sbjct: 181 TNPSEAFVVDSLLSPGVVFSVNQSKYDKNYIIAPIAFARNLFGQQGRLSSLEFRLKDGSD 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ + + I G V+D ++ F +
Sbjct: 241 LDAVKKEMQEIGGAKYKVMDRFEQQADTFKIMQ 273
>gi|145637549|ref|ZP_01793206.1| glycerate dehydrogenase [Haemophilus influenzae PittHH]
gi|145269235|gb|EDK09181.1| glycerate dehydrogenase [Haemophilus influenzae PittHH]
Length = 393
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 104/267 (38%), Gaps = 12/267 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +A RY + + F + + ++ +G+++GVMALI+V+SVMNG ++VL
Sbjct: 1 MNFPISLYIALRYWRAKSADRFGRLVTNLASLGIVLGVMALIIVLSVMNGLEGYQKQQVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H ++ ++ L+ +P ++ ++ + + G S + GI
Sbjct: 61 SSIPHAIVSEEQPI-----STEKTLENLPHFVQKAVPINTTNVIYQTAKGVSAGQIIGIQ 115
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ L SF ++IG LA+ LG++IGDKI ++
Sbjct: 116 SFSDDPLVESF-EQTKFNEILPSGEFKLVIGDQLAQKLGVNIGDKIRLMITENSQYTPFG 174
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
+ + + + + + ++ + + G +F+ DP I
Sbjct: 175 RVPMQRLFTVSDIYYDYGEASGYEAFANITDIGRLMRIQPQQAQGYRLFLNDPFQI---- 230
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + + DW+ + FF
Sbjct: 231 TELPQHFPTQ-KITDWRVQKGEFFQAV 256
>gi|240950339|ref|ZP_04754609.1| outer membrane-specific lipoprotein transporter subunit LolE
[Actinobacillus minor NM305]
gi|240295150|gb|EER45969.1| outer membrane-specific lipoprotein transporter subunit LolE
[Actinobacillus minor NM305]
Length = 416
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 48/268 (17%), Positives = 108/268 (40%), Gaps = 3/268 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ ++WRY +KN +S+ S S +G+ +GV LI+ +S MNGF ++ +RVL +
Sbjct: 1 MKASFFISWRYQRGKQKNRLVSLISLFSTMGIALGVAVLIIGLSAMNGFERELNQRVLSV 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS---GVLVRGI 121
H + + +L+ + + + V+ + L G+ VRG+
Sbjct: 61 VPHAELFSYGQQGNMPIKESAKLEALVKQNQNVRAVAPFVSFTALIENGTALKIAQVRGV 120
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ + F + G+I+G +A++L ++ GD++ +L P
Sbjct: 121 DPAKQDQVSQIGQFVPVAQWQQFHQEGGLILGAGIAKSLDVNAGDEVTLLLPQPAEDGKL 180
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ V G+ ++ + + + +L N +SG+E+ + P +
Sbjct: 181 AQPLRFNLPVTGILKLEGQLDHSYALLPLEKAQELLEYRPNEISGLELALTSPFEAQMLE 240
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + W ++ ++ +
Sbjct: 241 LPQLETFKQPLYLNTWINKFGYMYNDIQ 268
>gi|167855736|ref|ZP_02478491.1| lipoprotein-releasing system transmembrane protein [Haemophilus
parasuis 29755]
gi|167853133|gb|EDS24392.1| lipoprotein-releasing system transmembrane protein [Haemophilus
parasuis 29755]
Length = 416
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 51/265 (19%), Positives = 103/265 (38%), Gaps = 3/265 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY +KN +S+ S S +G+ +GV LI+ +S MNGF ++ +RVL + H
Sbjct: 4 PFFISWRYQRGKQKNRLVSLISLFSSVGIALGVAVLIIGLSAMNGFERELNQRVLSVVPH 63
Query: 68 VVIQQKYYPLVDYQ---FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
I + + L + S VRGI +
Sbjct: 64 AEIMAYNESKSATIAQGDRLEHIVKDNPNVTALSPFVSFTGLIENDSQLKIAQVRGIDPT 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + F + G+++G +AR+L I++GD++ +L
Sbjct: 124 KQEQVSQLTQFIPQDQWQAFKQEGGLVLGAGIARSLDINVGDEVTLLLSQPTDDGKLAQP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
S T+ G+ R+ + + + +L + +GIE+ VK P + + +
Sbjct: 184 LRFSLTMTGILRLDGQLDHSYALLPIAKAQELLELKPSQYTGIELAVKQPFQVREITFSE 243
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + W ++ ++ +
Sbjct: 244 LANYPQQLYMQTWIDKFGYMYNDIQ 268
>gi|183599468|ref|ZP_02960961.1| hypothetical protein PROSTU_02947 [Providencia stuartii ATCC 25827]
gi|188021715|gb|EDU59755.1| hypothetical protein PROSTU_02947 [Providencia stuartii ATCC 25827]
Length = 387
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 60/255 (23%), Positives = 110/255 (43%), Gaps = 7/255 (2%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
+ + F S +S IG+ +GV ALI V SVMNGF + +L V+
Sbjct: 1 MRGRAVDKFGRFVSSLSAIGITLGVAALITVTSVMNGFERSLQDSILSYMPQAVLTSATG 60
Query: 76 PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSR 135
+ ++ L + V + P V + S+ G G+++ S+ L N
Sbjct: 61 HIDPQKYPIADLQGLQGVSHIAPLVQSDVVLQSRSNVGVGMMLGITSDERSPLLDNLID- 119
Query: 136 FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSP-YGDVTPMGMGIRSKSYTVLGM 194
G S + V +G LA NLG+ GD++ ++ P +TPMG + +TV G+
Sbjct: 120 --GQRSELVEGQYRVFLGNKLAENLGLKRGDEVRLIIPGVSQLTPMGRIPSQRLFTVAGV 177
Query: 195 FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVV 254
F+ + ++ A++ ++G +F+ +P ++ + L +G++
Sbjct: 178 FQTNGEADASELIVAQNDAARMMRYPAGHITGWRLFLNEPLKVDTLS---QQNLPDGLIW 234
Query: 255 IDWQQRYQIFFSCYE 269
DW++R FF +
Sbjct: 235 TDWRERKGEFFQAVK 249
>gi|53729136|ref|ZP_00134109.2| COG4591: ABC-type transport system, involved in lipoprotein
release, permease component [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126209492|ref|YP_001054717.1| lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae L20]
gi|126098284|gb|ABN75112.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 5b str. L20]
Length = 390
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 45/261 (17%), Positives = 99/261 (37%), Gaps = 13/261 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A+RY S + F + + ++ G+++GVMAL++V+SVMNG + +L H
Sbjct: 6 LFIAFRYWRSKSADRFGRLVTNLASFGIVLGVMALVIVLSVMNGLENMQKRNLLSTLPHA 65
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
++ + Q ++ V V Q+ + G +
Sbjct: 66 IVLPQEGHFDKNQSLSLPAFASKSVAINKANVIIQS---------QQGINAGQLLGVENE 116
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ + V+IG LA L I G+KI ++ + +
Sbjct: 117 SDDPMLIGEDVKTLLPQGEFNVLIGSRLANKLNIGTGEKIRLMITENSQYTPMGRVPVQR 176
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ + ++ +L + + E+ V G+ ++++DP + + +++
Sbjct: 177 LFNVVGIYHSNNEASEYTLFANLADVGRLLRITEDQVQGMRLYLQDPFQVTELNQHFDA- 235
Query: 248 LGNGVVVIDWQQRYQIFFSCY 268
N + DW+++ FF
Sbjct: 236 --NNYKISDWREQKGEFFQAV 254
>gi|251792439|ref|YP_003007165.1| outer membrane-specific lipoprotein transporter subunit LolE
[Aggregatibacter aphrophilus NJ8700]
gi|247533832|gb|ACS97078.1| lipoprotein releasing system, transmembrane protein LolE
[Aggregatibacter aphrophilus NJ8700]
Length = 416
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 50/265 (18%), Positives = 94/265 (35%), Gaps = 3/265 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY S KN +S+ SF S +G+ +GV LIV +S MNGF ++ +R+L + H
Sbjct: 4 PFFISWRYQRSKHKNRLVSLISFFSSLGIALGVAVLIVGLSAMNGFERELNQRILAVVPH 63
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS--NSD 125
I L + +S + L G+ + V I S
Sbjct: 64 AEITSAPGQHETSIRHWQNLQTKLKQNPQINGISPFVSFTALVENGAKLKVVQIKGVESL 123
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
++ RF N +G +I L +
Sbjct: 124 LQDSVSTLGRFVLNDGWQHFAKQGGLILGYGIARDLGVQEGDWVSLLISQQKGSENLSQP 183
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHENI 244
+ + D+ M L +AQ + VSG+E+ DP +++ + ++
Sbjct: 184 LRERVQVTGILRLDGQLDHSYALMPLSQAQQLMEYQPDEVSGVELKTTDPFSVQTMNYSM 243
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
++ + + W ++ + +
Sbjct: 244 LQDYPQTLYLQTWISKFGYMYRDIQ 268
>gi|33152008|ref|NP_873361.1| outer membrane-specific lipoprotein transporter subunit LolE
[Haemophilus ducreyi 35000HP]
gi|33148230|gb|AAP95750.1| lipoprotein releasing system transmembrane protein [Haemophilus
ducreyi 35000HP]
Length = 416
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 50/265 (18%), Positives = 100/265 (37%), Gaps = 3/265 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY +KN IS+ S S IG+ +GV LI+ +S MNGF ++ +RVL + H
Sbjct: 4 PFFISWRYQRGKQKNRLISLISLFSSIGIALGVAVLIIGLSAMNGFERELNQRVLSVVPH 63
Query: 68 ---VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
V + + L + L + VRGI +
Sbjct: 64 AELRVFNEVENSPIYAGEKLAELAKRNQDVIALAPFVSFTGLIENGRQLKIAQVRGIDAT 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + F + G+I+G +A+ L +++GD + +L P
Sbjct: 124 KQDQVSSLSQYVASQQWQAFQQQGGLILGAGIAKALNVTVGDDVTLLLPQTSGENKLAQP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + G+ R+ + + + QL +GI++ +K P ++
Sbjct: 184 LRFNLPISGILRLEGQLDHSYALLPLAKAQQLLDYQPTEYTGIQLALKQPFNAQRLQLPE 243
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + W ++ ++ +
Sbjct: 244 LAEFEQPLYLATWIDKFGYMYNDIQ 268
>gi|167854702|ref|ZP_02477482.1| glycerate dehydrogenase [Haemophilus parasuis 29755]
gi|167854239|gb|EDS25473.1| glycerate dehydrogenase [Haemophilus parasuis 29755]
Length = 393
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 47/268 (17%), Positives = 100/268 (37%), Gaps = 14/268 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +A+RY S + F + + ++ +G+++GVMAL++V+SVMNG + +L
Sbjct: 1 MNLTTPLFIAFRYWRSKSGDRFGRLVTNLASLGIVLGVMALVIVLSVMNGLENMQKRNLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H +I Q +P ++ +S + G + + G+
Sbjct: 61 STLPHAIISPIDEAWSKEQQ-----LNLPAYVEKSVPISRANVMIQSQHGINAGQLIGVE 115
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ L + V+IG LA L +++GDKI ++
Sbjct: 116 KNSDDPL---LTEVSDLAERLPAGDFNVLIGSRLANQLDLNVGDKIRLMITENSQYTPFG 172
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
+ + + + ++ +L + + E G+ +F+ DP
Sbjct: 173 RVPVQRLFTVSDIYYSNNEASAYTLFANLADVGRLLRIEEGKSQGVRLFLTDPF----LV 228
Query: 242 ENIVRILG-NGVVVIDWQQRYQIFFSCY 268
+ + +V DW+++ FF
Sbjct: 229 TELPSAFPADKWLVNDWREQKGEFFQAV 256
>gi|145632946|ref|ZP_01788679.1| adenosylmethionine--8-amino-7-oxononanoate transaminase
[Haemophilus influenzae 3655]
gi|229844227|ref|ZP_04464368.1| adenosylmethionine--8-amino-7-oxononanoate transaminase
[Haemophilus influenzae 6P18H1]
gi|144986602|gb|EDJ93168.1| adenosylmethionine--8-amino-7-oxononanoate transaminase
[Haemophilus influenzae 3655]
gi|229813221|gb|EEP48909.1| adenosylmethionine--8-amino-7-oxononanoate transaminase
[Haemophilus influenzae 6P18H1]
Length = 393
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 105/267 (39%), Gaps = 12/267 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +A RY + + F + + ++ +G+++GVMALI+V+SVMNG ++VL
Sbjct: 1 MNFPISFYIALRYWRAKSADRFGRLVTNLASLGIVLGVMALIIVLSVMNGLEGYQKQQVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H ++ ++ L+ +P ++ ++ + + G S + GI
Sbjct: 61 SSIPHAIVSEEQPI-----STEKTLENLPHFVQKAVPINTTNVIYQTAKGVSAGQIIGIQ 115
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ L SF + N ++IG LA+ LG++IGDKI ++
Sbjct: 116 SFSDDPLVESFEQAKFNEI-LPSGEFKLVIGDQLAQKLGVNIGDKIRLMITENSQYTPFG 174
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
+ + + + + + ++ + + G +F+ DP I
Sbjct: 175 RVPMQRLFTVSDIYYDYGEASGYEAFANITDIGRLMRIQPQQAQGYRLFLNDPFQI---- 230
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + + DW+ + FF
Sbjct: 231 TELPQHFPTQ-KITDWRVQKGEFFQAV 256
>gi|291278886|ref|YP_003495721.1| lipoprotein-releasing system permease protein [Deferribacter
desulfuricans SSM1]
gi|290753588|dbj|BAI79965.1| lipoprotein-releasing system permease protein [Deferribacter
desulfuricans SSM1]
Length = 410
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 73/270 (27%), Positives = 136/270 (50%), Gaps = 4/270 (1%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
++ + +A+RYL S + + +S SFIS +G+++GV LIVV SV+ GF E++ ++++G
Sbjct: 1 MAKIDGFIAFRYLKSKKSSKVLSFISFISIVGIVLGVATLIVVTSVLTGFSENLKEKIVG 60
Query: 64 INGHVVIQQ-KYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLS--SGGSGVLVRG 120
N H+VI + P+ +++ I+ +++ + V+ V PF+ Q VS +G + +
Sbjct: 61 ANSHIVINKLDGTPIENWKKISKKVEKVDGVVAVAPFIMSQVLVSTKDVVNGVAVKGIIP 120
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ L + +D + IGK+LA LG+ +GD + ++SP+G P
Sbjct: 121 ELEVKATNLGKFIKQGDLKSLSDNSTKPYIAIGKELANTLGVVVGDDVVLISPFGKKGPF 180
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEK 239
G K + V +F +Y+N ++++ L + +F ++ VSG+ V D + +
Sbjct: 181 GFTPIMKHFRVGAIFDTGMYEYNNSLIFVDLNVLKNFFKIKREGVSGLSVKTIDFNKSGE 240
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
NI LG DW + FS +
Sbjct: 241 IAVNIQAKLGFPYWARDWLSMNRNLFSALK 270
>gi|295096193|emb|CBK85283.1| ABC-type transport system, involved in lipoprotein release,
permease component [Enterobacter cloacae subsp. cloacae
NCTC 9394]
Length = 331
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 52/246 (21%), Positives = 104/246 (42%), Gaps = 1/246 (0%)
Query: 24 FISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFI 83
+S+ S IS IG+ +GV LIV +S MNGF ++ R+L + H I+ P ++
Sbjct: 1 MVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEPVNQPWSSWRDA 60
Query: 84 ANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSND 143
N+++ +P + P+++ V + + + + G +N
Sbjct: 61 LNKVEKVPGIAAAAPYINFTGLVESGVNLRAIQVKGVNPRQEERLSALPRYVQNGAWANF 120
Query: 144 FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYD 203
+ +I+GK +A L + GD ++I+ P + V G+ + D
Sbjct: 121 KAGEQQIIMGKGVADALKVKQGDWVSIMIPNASADHKLQQPKRVRLHVTGILQ-LSGQLD 179
Query: 204 NGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQI 263
+ + L++A+ Y ++ ++V+GI + V D K + + N V + W Y
Sbjct: 180 HSFAMVPLEDARQYLDMSDSVTGIAIKVNDVFNANKLVRDAGSVTNNYVYIKSWIGTYGY 239
Query: 264 FFSCYE 269
+ +
Sbjct: 240 MYRDIQ 245
>gi|312891239|ref|ZP_07750759.1| protein of unknown function DUF214 [Mucilaginibacter paludis DSM
18603]
gi|311296287|gb|EFQ73436.1| protein of unknown function DUF214 [Mucilaginibacter paludis DSM
18603]
Length = 408
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 54/265 (20%), Positives = 97/265 (36%), Gaps = 4/265 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
V +A RYLFS + I+I S IS +GV IG ALIV++SV NGF + ++ +
Sbjct: 4 SVYIARRYLFSRKSTHAINIISGISMLGVFIGSAALIVILSVFNGFEKVILALYNNFSPE 63
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ I+ D + V + + V+G+S +
Sbjct: 64 LKIEPVRGKTFDPNTPYFNTLHKNAALFSFAEVLEEKALVRYGDRQVISTVKGVSTEFLN 123
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN----ILSPYGDVTPMGMG 183
+ G+ + + + +IG + +L ++I D++ G V +
Sbjct: 124 NRGLDSTIISGSFTLELHKQAAAVIGTIVQSSLSVNIKDELTPLQIYSPRRGLVNSVNPM 183
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ + +V L + + N VS IE+ KD ++K
Sbjct: 184 DEFIQKNIYPSGVFSIQQDFDDIVVTPLSFTRELLDEPNEVSSIELNFKDGTDLDKVQNE 243
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCY 268
I +GN V D ++ +
Sbjct: 244 IKTKIGNAFTVKDRYEQNTSLYRIL 268
>gi|88798816|ref|ZP_01114399.1| ABC-type transport system, involved in lipoprotein release,
permease component [Reinekea sp. MED297]
gi|88778579|gb|EAR09771.1| ABC-type transport system, involved in lipoprotein release,
permease component [Reinekea sp. MED297]
Length = 384
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 62/237 (26%), Positives = 100/237 (42%), Gaps = 2/237 (0%)
Query: 33 FIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPD 92
IG+ +GVM LI+V+SVMNGF +M R+LG+ H I + L P
Sbjct: 1 MIGLTLGVMVLIIVLSVMNGFDREMRNRILGMVPHAEIYLPGEMRNAEEVRQAAL-EHPL 59
Query: 93 VIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVII 152
V+ P++ Q +L ++ S G++ GVII
Sbjct: 60 VVGASPYIKTQGMAISNDRTQGALLTGVDPDTLGSVSILPDHMVAGSLEALEQSSFGVII 119
Query: 153 GKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQ 212
G+ LAR L +S+GDK ++ P V G+ R K +TV+G+F++ D +V +
Sbjct: 120 GQSLARILNVSVGDKFRVMVPELSVNIAGIQPRFKRFTVVGIFKVGAEL-DASLVVTHID 178
Query: 213 EAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ +AV G+++ D + + R L V DW + F +
Sbjct: 179 DLAKLMMYGDAVDGVQLKTADLFKATQIALEVGRSLPQVYYVSDWTRTQGNLFQAIQ 235
>gi|261493243|ref|ZP_05989770.1| putative lipoprotein ABC superfamily ATP binding cassette
transporter, membrane protein [Mannheimia haemolytica
serotype A2 str. BOVINE]
gi|261496514|ref|ZP_05992894.1| putative lipoprotein ABC superfamily ATP binding cassette
transporter, membrane protein [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261307717|gb|EEY09040.1| putative lipoprotein ABC superfamily ATP binding cassette
transporter, membrane protein [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261311093|gb|EEY12269.1| putative lipoprotein ABC superfamily ATP binding cassette
transporter, membrane protein [Mannheimia haemolytica
serotype A2 str. BOVINE]
Length = 421
Score = 109 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 47/273 (17%), Positives = 101/273 (36%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
++WRY +KN +S+ + S IG+ +GV LI+ +S MNGF ++ RVL +
Sbjct: 1 MSTPFFISWRYQRGKQKNRLVSLIALFSNIGIALGVAVLIIGLSAMNGFERELNNRVLSV 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFI--------PDVIKVLPFVSGQAFVSGLSSGGSGV 116
H + F + +L+ + V + + GV
Sbjct: 61 VPHAELVSFQGNQPQPIFDSKKLEALVKKSQNVTASSPFVSFTALIENGAQLKIAQVRGV 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
+ + ++ G+I+G +A+ L + GD++ +L P
Sbjct: 121 DPKKQDQASQLSQFIPPEQWQAFNQQFQADEDGLILGAGIAKALEVEAGDEVTLLIPQPT 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
+ V G+ R+ + + + +L N VSG+E+ + +P
Sbjct: 181 EDGKLAQPLRFNLNVTGILRLDGQLDHSYALIPLNKAQELMEYQANEVSGLEISLANPFD 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+++ + + + W ++ ++ +
Sbjct: 241 VQQLEMPQLNGYTQPLYLNTWIDKFGYMYNDIQ 273
>gi|294674934|ref|YP_003575550.1| putative permease [Prevotella ruminicola 23]
gi|294474043|gb|ADE83432.1| putative permease [Prevotella ruminicola 23]
Length = 409
Score = 109 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 57/273 (20%), Positives = 97/273 (35%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RYLFS + I++ S IS IGV + MAL+V +SV NGF + +
Sbjct: 1 MNFPFFIARRYLFSKKSTHAINVISGISVIGVAVATMALVVTLSVFNGFHDLVATFFTSF 60
Query: 65 NGHVVIQQKYYPLVDYQFIA-NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ + + V + +P++ V A V+ N
Sbjct: 61 DPQLKVVPAEGKTVAADDPILTEIRQLPEIEVATESVEDMALAIYRGRQAMVVIKGVDDN 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD------- 176
N G+ S +G LA LG + I
Sbjct: 121 FAQLTHINEILVGDGDFSLHAADMDYGTLGIRLAETLGTGYTYEEPIHIYAPRREGQLDM 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
P + Y+ +F ++ YD + S+ A+ F + +S +E+ +K
Sbjct: 181 TNPDEAFEEDELYSPGVLFNVKQSRYDKNYILTSIAFARRIFGQQGMLSSLELRLKPGSN 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+KT + I ++ G VV D ++ F +
Sbjct: 241 FDKTKDQIKQLCGTKFVVKDRFEQQDDTFKIMK 273
>gi|282880569|ref|ZP_06289276.1| efflux ABC transporter, permease protein [Prevotella timonensis
CRIS 5C-B1]
gi|281305672|gb|EFA97725.1| efflux ABC transporter, permease protein [Prevotella timonensis
CRIS 5C-B1]
Length = 412
Score = 109 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 50/273 (18%), Positives = 105/273 (38%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F V+ RYLFS + I++ S IS IGV + M+L++V+SV NGF + + +
Sbjct: 1 MNFPFFVSRRYLFSKKSTNAINVISIISMIGVAVATMSLVIVLSVFNGFHDLVASFLTNF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + I D Q + + + + ++ + V ++G+ ++
Sbjct: 61 DPQLEIVPTQGKSADAQDKLLKQVKQLKQVAISTENVEEMAIAMYQDKQAMVTIKGVEDN 120
Query: 125 DFSYLQNSFSRFYGNVSNDF-----DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
S + G+ + + L KI G +
Sbjct: 121 FDSLTHIKDILYGDGEYQLHAGNLEYGVLGIRLAQSLDVGASWDGFIKIYAPKRIGQLDM 180
Query: 180 MGMGIRSKSY---TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
G + +F + YD G + S+ A+ F+++ ++ +E+ +K
Sbjct: 181 SNPGDGFVVDSLLSPGVVFSVNQAKYDKGHIITSIDFARQLFDMKGRITSLELRLKAGSD 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+++T + I I+G+ V+D ++ F +
Sbjct: 241 LKETQKEIQHIVGDKYKVLDRFEQQADTFKIMQ 273
>gi|88606867|ref|YP_505846.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Anaplasma phagocytophilum HZ]
gi|88597930|gb|ABD43400.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Anaplasma phagocytophilum HZ]
Length = 399
Score = 109 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 59/263 (22%), Positives = 107/263 (40%), Gaps = 14/263 (5%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
E ++A RYL S + S S S +G+ IGV L+ VM+VM+GF ++ +LG+NG
Sbjct: 3 LEWLLARRYLSSKKGRFLCSPMSVFSILGISIGVATLVSVMAVMSGFSAKLLHNILGMNG 62
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
H+ + + + + V+ V+ + S + V
Sbjct: 63 HITVHCQDVDYHTV------IPEVESTAGVVSAVAVLEGQVMVKSEHAAVGAVLRGMEMP 116
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ + G+IIG LA +L + GD++ + + R+
Sbjct: 117 DISDKLSQYVVSGDTEE--LEAGIIIGSRLAESLNVYYGDEVVV----ISSSSFSTMPRT 170
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
Y V G+F + +YD+ VY+ L+ AQ + + +EV V D + ++
Sbjct: 171 HEYKVTGIFNVGMYEYDSAFVYVPLESAQTLLGYDGGMQYVEVRVDDALHSSNIVKELIE 230
Query: 247 ILGNGVVVIDWQQRYQIFFSCYE 269
+ V DW+ ++ +F E
Sbjct: 231 K--TKMRVEDWKVQHGQYFYALE 251
>gi|301170292|emb|CBW29898.1| outer membrane-specific lipoprotein transporter subunit
[Haemophilus influenzae 10810]
Length = 393
Score = 109 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 51/267 (19%), Positives = 107/267 (40%), Gaps = 12/267 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +A RY + + F + + ++ +G+++GVMALI+V+SVMNG ++VL
Sbjct: 1 MNFPISLYIALRYWRAKSADRFGRLVTNLASLGIVLGVMALIIVLSVMNGLEGYQKQQVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H ++ ++ I L+ +P ++ ++ + + G S + GI
Sbjct: 61 SSIPHAIVSEEQPI-----SIEKTLENLPHFVQKAVPINTTNVIYQTAKGVSAGQIIGIQ 115
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ L SF + N ++IG LA+ LG++IGDKI ++
Sbjct: 116 SFSDDPLVESFEQAKFNEI-LPSGAFKLVIGDQLAQKLGVNIGDKIRLMITENSQYTPFG 174
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
+ + + + + + ++ + + G +F+ DP I
Sbjct: 175 RVPMQRLFTVSDIYYDYGEASGYEAFANITDIGRLMRIQPQQAQGYRLFLNDPFQI---- 230
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + + DW+ + FF
Sbjct: 231 TELPQHFPTQ-KITDWRVQKGEFFQAV 256
>gi|148826077|ref|YP_001290830.1| adenosylmethionine--8-amino-7-oxononanoate transaminase
[Haemophilus influenzae PittEE]
gi|148716237|gb|ABQ98447.1| adenosylmethionine--8-amino-7-oxononanoate transaminase
[Haemophilus influenzae PittEE]
gi|309973228|gb|ADO96429.1| Outer membrane-specific lipoprotein ABC transporter, permease
component LolE [Haemophilus influenzae R2846]
Length = 393
Score = 109 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 107/267 (40%), Gaps = 12/267 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +A RY + + F + + ++ +G+++GVMALI+V+SVMNG ++VL
Sbjct: 1 MNFPISLYIALRYWRAKSADRFGRLVTNLASLGIVLGVMALIIVLSVMNGLEGYQKQQVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H ++ ++ L+ +P ++ ++ + + G S + GI
Sbjct: 61 SSIPHAIVSEEQPI-----STEKTLENLPHFVQKAVPINTTNVIYQTAKGVSAGQIIGIQ 115
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ L SF + N ++IG LA+ LG++IGDKI ++
Sbjct: 116 SFSDDPLVESFDQTKFNEI-LPRGEFKLVIGDQLAQKLGVNIGDKIRLMITENSQYTPFG 174
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
+ + + + + + ++ + + G +F+ DP I +
Sbjct: 175 RVPMQRLFTVSDIYYDYGEASGYEAFANITDIGRLMRIQPQQAQGYRLFLNDPFQITELP 234
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
++ + DW+ + FF
Sbjct: 235 QHFSTQ-----KITDWRVQKGEFFQAV 256
>gi|332036274|gb|EGI72746.1| lipoprotein releasing system transmembrane protein LolC
[Pseudoalteromonas haloplanktis ANT/505]
Length = 405
Score = 109 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 67/267 (25%), Positives = 116/267 (43%), Gaps = 3/267 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY S++ NAFIS SF S G+ IG+MAL V SVMNGF + +L
Sbjct: 1 MFQPVSLFIGLRYSRSSKGNAFISFISFFSIAGIAIGLMALFTVSSVMNGFENSLKTNML 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ HV + + + L+ P V V + G+A + + GVL++G+
Sbjct: 61 GLIPHVEVSAGKHTATQMGTLKTDLEQSPYVDHVSLYRHGEAILQ-TNKDLHGVLLQGLY 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
N S + + G+ ++ + I + L+R LG+S+GDK+ ++ P
Sbjct: 120 NDSGSLYKITDKIVQGDWKTVLNKNYNIAISRYLSRKLGVSVGDKLRVIMPNASTYTPLG 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ + + D + + S Q L+ N + V + +P +++
Sbjct: 180 RVPSQRLFKVAAIYETGSEIDMALAFTSGASLQRVLKLDKNTAPNLSVSLHEPFELDEFI 239
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
E RIL DW+ F+
Sbjct: 240 EASQRIL-KDHNYSDWRSTQGTLFTAV 265
>gi|150003446|ref|YP_001298190.1| hypothetical protein BVU_0873 [Bacteroides vulgatus ATCC 8482]
gi|254881256|ref|ZP_05253966.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|294777672|ref|ZP_06743123.1| efflux ABC transporter, permease protein [Bacteroides vulgatus
PC510]
gi|319640258|ref|ZP_07994983.1| hypothetical protein HMPREF9011_00580 [Bacteroides sp. 3_1_40A]
gi|149931870|gb|ABR38568.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
gi|254834049|gb|EET14358.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|294448740|gb|EFG17289.1| efflux ABC transporter, permease protein [Bacteroides vulgatus
PC510]
gi|317388033|gb|EFV68887.1| hypothetical protein HMPREF9011_00580 [Bacteroides sp. 3_1_40A]
Length = 412
Score = 109 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 56/273 (20%), Positives = 96/273 (35%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RYLFS + + I++ S IS GV + +AL+ +SV NGF++ +
Sbjct: 1 MNFPFYIAKRYLFSKKSHNAINVISAISVCGVALATLALVCTLSVFNGFQDLVATFFTAF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + I + D Q I V + + + +++GI ++
Sbjct: 61 DPELKITAVTGKVFDGQEARIEALRRMPEIAVFSESLEENAMVQYKGRQTMAVIKGIEDN 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIG-----KDLARNLGISIGDKINILSPYGDVTP 179
F D I L + +I V
Sbjct: 121 FEDLTAIDSILFGRGQFVLHDEVVDYAIPGIELVSILGTGIKFLDPLEIYAPKRGAKVNM 180
Query: 180 MGMGIRSKS---YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
S Y+ +F + YD+ + SLQ A+ F + VS +E+ +K
Sbjct: 181 ANPASSFNSADLYSSGLVFAVNQQKYDSSYILTSLQFARRLFQYDTEVSSVELKLKPDAD 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I +ILG+G V D ++ F E
Sbjct: 241 VGSVKSKIQKILGDGFRVQDRYEQQADTFRIME 273
>gi|254468349|ref|ZP_05081755.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[beta proteobacterium KB13]
gi|207087159|gb|EDZ64442.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[beta proteobacterium KB13]
Length = 420
Score = 109 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 77/268 (28%), Positives = 136/268 (50%), Gaps = 6/268 (2%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+ V+ + L + KN F+S F S +G+ IGVMALIVVMSVMNGF ++ KR+L
Sbjct: 6 LDFWVSRKILINGSKNRFLSFIGFSSILGISIGVMALIVVMSVMNGFHFELKKRILDATS 65
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
H+ + + + ++ + V V P+VSG+ +S S GVLV+GI+
Sbjct: 66 HIEVTGGLDNQDEITQLIKKITDLKHVKAVSPYVSGEGLLSNRSVN-RGVLVKGINPQYE 124
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ + ++ + +IIG DLAR LG+ IGD +++L P + +P+G
Sbjct: 125 NNVNQLLNKVVKGSKKFSSKPFEIIIGVDLARLLGVDIGDDVSLLIPKLNFSPIGNYPTI 184
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF--NLENAVSGIEVFVKDPD---AIEKTH 241
K + ++G+F ++D+ + M Q+AQ F N + + +++ + D + +E
Sbjct: 185 KKFNIVGIFDAGIYEFDSSLALMDYQDAQKIFFKNQKTKFTAMQIQLTDSNKTLNVESDI 244
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I+ L + +W + + FFS +
Sbjct: 245 KKILTELNINSFITNWTNKNKNFFSAIQ 272
>gi|329123570|ref|ZP_08252132.1| lipoprotein ABC superfamily ATP binding cassette transporter,
membrane protein [Haemophilus aegyptius ATCC 11116]
gi|327470312|gb|EGF15772.1| lipoprotein ABC superfamily ATP binding cassette transporter,
membrane protein [Haemophilus aegyptius ATCC 11116]
Length = 393
Score = 109 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 107/267 (40%), Gaps = 12/267 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +A RY + + F + + ++ +G+++GVMALI+V+SVMNG ++VL
Sbjct: 1 MNFPISLYIALRYWRAKSADRFGRLVTNLASLGIVLGVMALIIVLSVMNGLEGYQKQQVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H ++ ++ L+ +P ++ ++ + + G S + GI
Sbjct: 61 SSIPHAIVSEEQPI-----STEKTLENLPHFVQKAVPINTTNVIYQTAKGVSAGQIIGIQ 115
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ L SF + N ++IG LA+ LG++IGDKI ++
Sbjct: 116 SFSDDPLVESFDQTKFNEI-LPRGEFKLVIGDQLAQKLGVNIGDKIRLMITENSQYTPFG 174
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
+ + + + + + ++ + + G +F+ DP I +
Sbjct: 175 RVPMQRLFTVSDIYYDYGEASGYEAFANITDIGRLMRIQPQQAQGYRLFLNDPFQITELP 234
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
++ + DW+ + FF
Sbjct: 235 QHFSTQ-----KITDWRVQKGEFFQAV 256
>gi|189465193|ref|ZP_03013978.1| hypothetical protein BACINT_01538 [Bacteroides intestinalis DSM
17393]
gi|189437467|gb|EDV06452.1| hypothetical protein BACINT_01538 [Bacteroides intestinalis DSM
17393]
Length = 410
Score = 109 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 54/273 (19%), Positives = 102/273 (37%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+A RYLFS +K+ I+I S IS GV + +AL+ +SV NGF++ +
Sbjct: 1 MNLPFYIARRYLFSKKKHNAINIISGISVCGVALATLALVCTLSVFNGFQDMVAGLFTAF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + I + + + A + I V + + +++G+ ++
Sbjct: 61 DPELKIMVREGKVFEPNGAAFQEVRSLPEIDVWTETLEDNAMVQYKDRQAMAIIKGVEDN 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGV---IIGKDLARNLGISIGDKINILSPYGDV---- 177
+ D + G+ D + + +P +V
Sbjct: 121 FELLTSIDSLLYGAGDFILHDSIVDYGVLGVELISELGTGLQFVDPLQVYAPKRNVRVNV 180
Query: 178 -TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
P R ++ +F + YD + SL A+ FN + VS +E+ +K
Sbjct: 181 ANPSASFNRDYLFSPGVVFVVNQQKYDARYILTSLDFARNLFNYDTEVSAVELKLKSDTD 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I RILG+ VV++ ++ F E
Sbjct: 241 ASAVQKKISRILGDDFVVLNRYEQQADVFRIME 273
>gi|307131507|ref|YP_003883523.1| outer membrane-specific lipoprotein ABC transporter membrane
protein [Dickeya dadantii 3937]
gi|306529036|gb|ADM98966.1| outer membrane-specific lipoprotein transporter subunit; membrane
component of ABC superfamily [Dickeya dadantii 3937]
Length = 415
Score = 109 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 59/266 (22%), Positives = 110/266 (41%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F +++ R+ R++ +S+ S IS +G+ +GV LIV +S MNGF ++ R+L
Sbjct: 3 FPPLSLLIGLRFSRGRRRSGMVSLISVISTLGIALGVAVLIVGLSAMNGFERELNNRILA 62
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ H I+ P D+Q + +++ +P V P+VS + +S +
Sbjct: 63 VVPHGEIEAANQPFRDWQPLLPKIERVPGVAAAAPYVSFTGLLENGASLKAIQFKGVDPQ 122
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ S + VIIGK +A LG+ GD + ++ P D M +
Sbjct: 123 QELKLSALPQFVQDNAWSRFHAGAQQVIIGKGVADALGVKNGDWVTVMIPNSD-PQMKLL 181
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ + D+ + + L +AQ Y L + ++GI + +D A +K +
Sbjct: 182 QPKRIRLQVAGILQLSGQLDHSLALVPLADAQQYLELGDGITGIAIKAQDVFAAQKLVHD 241
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
V + W Y + +
Sbjct: 242 AGEATNVYVYIRSWVGTYGYMYRDIQ 267
>gi|145639097|ref|ZP_01794705.1| adenosylmethionine--8-amino-7-oxononanoate transaminase
[Haemophilus influenzae PittII]
gi|145272069|gb|EDK11978.1| adenosylmethionine--8-amino-7-oxononanoate transaminase
[Haemophilus influenzae PittII]
gi|309751048|gb|ADO81032.1| Outer membrane-specific lipoprotein ABC transporter, permease
component LolE [Haemophilus influenzae R2866]
Length = 393
Score = 109 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 107/267 (40%), Gaps = 12/267 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +A RY + + F + + ++ +G+++GVMALI+V+SVMNG ++VL
Sbjct: 1 MNFPISLYIALRYWRAKSADRFGRLVTNLASLGIVLGVMALIIVLSVMNGLEGYQKQQVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H ++ ++ L+ +P ++ ++ + + G S + GI
Sbjct: 61 SSIPHAIVSEEQPI-----STEKTLENLPHFVQKAVPINTTNVIYQTAKGVSAGQIIGIQ 115
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ L SF + N ++IG LA+ LG++IGDKI ++
Sbjct: 116 SFSDDPLVESFDQTKFNEI-LPRGEFKLVIGDQLAQKLGVNIGDKIRLMITDNSQYTPFG 174
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
+ + + + + + ++ + + G +F+ DP I +
Sbjct: 175 RVPMQRLFTVSDIYYGYGEASGYEAFANITDIGRLMRIQPQQAQGYRLFLNDPFQITELP 234
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
++ + DW+ + FF
Sbjct: 235 QHFSTQ-----KITDWRVQKGEFFQAV 256
>gi|145634878|ref|ZP_01790585.1| glycerate dehydrogenase [Haemophilus influenzae PittAA]
gi|145267744|gb|EDK07741.1| glycerate dehydrogenase [Haemophilus influenzae PittAA]
Length = 393
Score = 109 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 103/267 (38%), Gaps = 12/267 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +A RY + + F + + ++ +G+++GVMALI+V+SVMNG + VL
Sbjct: 1 MNFPISLYIALRYWRAKSADRFGRLVTNLASLGIVLGVMALIIVLSVMNGLEGYQKQLVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H ++ ++ L+ +P ++ ++ + + G S + GI
Sbjct: 61 SSIPHAIVSEERPI-----STEKTLENLPHFVQKAVPINTTNVIYQTAKGVSAGQIIGIQ 115
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ L SF ++IG LA+ LG++IGDKI ++
Sbjct: 116 SFSDDPLVESF-EQTKFNEILPSGEFKLVIGDQLAQKLGVNIGDKIRLMITENSQYTPFG 174
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
+ + + + + + ++ + + G +F+ DP I
Sbjct: 175 RVPMQRLFTVSDIYYDYGEASGYEAFANITDIGRLMRIQPQQAQGYRLFLNDPFQI---- 230
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + + DW+ + FF
Sbjct: 231 TELPQHFPTQ-KITDWRVQKGEFFQAV 256
>gi|52425242|ref|YP_088379.1| hypothetical protein MS1187 [Mannheimia succiniciproducens MBEL55E]
gi|52307294|gb|AAU37794.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 397
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 51/268 (19%), Positives = 106/268 (39%), Gaps = 10/268 (3%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +A RY + + F + + ++ G+++GVMALI+V+SVMNG + ++VL
Sbjct: 1 MNFPVSLYIALRYWRAKSADRFARLVTNLASSGIVLGVMALIIVLSVMNGLEKHQKQQVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H V+ + L + PD ++ ++ + + G S + G+
Sbjct: 61 SGIPHAVLMPQEGYLDLQAAQPSM----PDFVRQAVPINSTNVILQTAQGVSAGHIIGVQ 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT-PMG 181
+ + ++ ++IG LA L ++IGDK+ ++ P G
Sbjct: 117 KPSDDLILDYLTQQQL-SELLPAGEFKILIGNRLADKLRLNIGDKVRLMITENSQYTPFG 175
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFN-LENAVSGIEVFVKDPDAIEKT 240
+ +TV ++ + ++ +L + V G +F+ DP I
Sbjct: 176 RVPTQRLFTVSDIYFSDNSEVSGYEIFANLSDIGRLMRIRPEQVQGYRLFLDDPFQITAL 235
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + + DW+ + FF
Sbjct: 236 PQFFSA---DKWKLEDWRSQKGEFFQAV 260
>gi|271500159|ref|YP_003333184.1| lipoprotein releasing system transmembrane protein LolE [Dickeya
dadantii Ech586]
gi|270343714|gb|ACZ76479.1| lipoprotein releasing system, transmembrane protein LolE [Dickeya
dadantii Ech586]
Length = 415
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 61/266 (22%), Positives = 114/266 (42%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F ++V R+ R++ +S+ S IS +G+ +GV LIV +S MNGF ++ R+L
Sbjct: 3 FPPLSLLVGLRFSRGRRRSGMVSLISVISTLGIALGVAVLIVGLSAMNGFERELNNRILA 62
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ H I+ P ++Q + +++ +P V P+VS + +S +
Sbjct: 63 VVPHGEIEAGEQPFRNWQPLLPKIEQVPGVAAAAPYVSFTGLLENGASLKAIQFKGVDPQ 122
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ S + VIIGK +A LG+ GD + ++ P D +
Sbjct: 123 QELKLSALPTFVQDNAWSRFHAGAQQVIIGKGVADTLGVKSGDWVTVMIPNSDPQMKLLQ 182
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ + G+ + D+ + + L +AQ Y +L + V+GI + V+D A +K +
Sbjct: 183 PKRIRLQIAGILK-LSGQLDHSLALVPLADAQQYLDLGDGVTGIAIKVQDVFAAQKVVHD 241
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
V + W Y + +
Sbjct: 242 AGEATNLFVYIRSWIGTYGYMYRDIQ 267
>gi|254362300|ref|ZP_04978412.1| possible lipoprotein ABC superfamily ATP binding cassette
transporter, membrane protein [Mannheimia haemolytica
PHL213]
gi|153093880|gb|EDN74808.1| possible lipoprotein ABC superfamily ATP binding cassette
transporter, membrane protein [Mannheimia haemolytica
PHL213]
Length = 421
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 47/273 (17%), Positives = 101/273 (36%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
++WRY +KN +S+ + S IG+ +GV LI+ +S MNGF ++ RVL +
Sbjct: 1 MSTPFFISWRYQRGKQKNKLVSLIALFSNIGIALGVAVLIIGLSAMNGFERELNNRVLSV 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDV--------IKVLPFVSGQAFVSGLSSGGSGV 116
H + F + +L+ + V + + GV
Sbjct: 61 VPHAELVSFQGNQPQPIFDSKKLEALIKKSQNVTASSPFVSFTALIENGAQLKIAQVRGV 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
+ + ++ G+I+G +A+ L + GD++ +L P
Sbjct: 121 DPKKQDQASQLSQFIPPEQWQAFNQQFQADEDGLILGAGIAKALEVEAGDEVTLLIPQPT 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
+ V G+ R+ + + + +L N VSG+E+ + +P
Sbjct: 181 EDGKLAQPLRFNLNVTGILRLDGQLDHSYALIPLNKAQELMEYQANEVSGLEISLANPFD 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+++ + + + W ++ ++ +
Sbjct: 241 VQQLEMPQLNGYTQPLYLNTWIDKFGYMYNDIQ 273
>gi|90021456|ref|YP_527283.1| addiction module toxin, Txe/YoeB [Saccharophagus degradans 2-40]
gi|89951056|gb|ABD81071.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Saccharophagus degradans 2-40]
Length = 412
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 57/268 (21%), Positives = 114/268 (42%), Gaps = 5/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNA-FISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+ + +++ RY + RK + IS S IS G+++GV LI V+SVMNGF ++ + +
Sbjct: 1 MLNLLPIVIGLRYTGAKRKKSQLISFLSGISIAGLVVGVGLLITVLSVMNGFDRELRENI 60
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
LG+ VI + + ++Q + + L D++ P+V V+ VL
Sbjct: 61 LGLVPQAVINHQE-GIAEWQPLVDELTADKDILAAAPYVQTYGLVALGKQAEPVVLYGVE 119
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ + + +++ +++GKDLA L +S+G+K+ ++ P D G
Sbjct: 120 PEYEVRVSRITDFIAADVLASIEQGEPSILLGKDLAATLNVSVGNKVMMVVPGADG---G 176
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
Y + + D + SL + + NAV+G+ + + +
Sbjct: 177 RAAPKTGYFKVVGLVDSKTELDATLAITSLTHSLPLTSHPNAVTGVRLKLNNLFDAPYVV 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ LG G +W + + + +
Sbjct: 237 YRHLLELGPGYSGNNWTRTHGNLYHAIK 264
>gi|237725977|ref|ZP_04556458.1| conserved hypothetical protein [Bacteroides sp. D4]
gi|265752998|ref|ZP_06088567.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|229435785|gb|EEO45862.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
gi|263236184|gb|EEZ21679.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 412
Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats.
Identities = 55/273 (20%), Positives = 94/273 (34%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RYLFS + + I++ S IS GV + +AL+ +SV NGF++ +
Sbjct: 1 MNFPFYIAKRYLFSKKSHNAINVISAISVCGVALATLALVCTLSVFNGFQDLVATFFTAF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + I + D Q I V + + + +++GI ++
Sbjct: 61 DPELKITAVTGKVFDGQEARIEALRRMPEIAVFSESLEENAMVQYKDRQTMAVIKGIEDN 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIG-----KDLARNLGISIGDKINILSPYGDVTP 179
F D I L + +I V
Sbjct: 121 FEDLTAIDSILFGRGQFVLHDEVVDYAIPGIELVSILGTGIKFLDPLEIYAPKRGVKVNM 180
Query: 180 MGMGIRSKS---YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
S Y+ +F + YD+ + SLQ A+ F + VS +E+ +K
Sbjct: 181 ANPASSFNSADLYSSGLVFAVNQQKYDSSYILTSLQFARRLFQYDTEVSSVELKLKPDVD 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
I +ILG+ V D ++ F E
Sbjct: 241 AGSVKSKIQKILGDDFRVQDRYEQQADTFRIME 273
>gi|327312747|ref|YP_004328184.1| efflux ABC transporter permease [Prevotella denticola F0289]
gi|326945069|gb|AEA20954.1| efflux ABC transporter, permease protein [Prevotella denticola
F0289]
Length = 410
Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats.
Identities = 58/272 (21%), Positives = 109/272 (40%), Gaps = 8/272 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RYLFS + I++ S IS +GV + MAL+VV+S NGF + +
Sbjct: 1 MNFPFYIARRYLFSKKSTHAINVISLISVLGVSVATMALVVVLSGFNGFSDLVASFFTNF 60
Query: 65 NGHVVIQQKYYPLVDYQFI-ANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ + I+ + + ++ +P V V QA + N
Sbjct: 61 DPQLKIEAAKGKAMSAKDPSLLKVKRLPIVEVATECVEDQALAVYHDKQAMVNVKGVEDN 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGIS--IGDKINILSPYGDVTPMG 181
D ++ G+ + + ++G LA++LG D + I +P +
Sbjct: 121 FDSLTHISNILYGDGDFTLHAANLQYGVLGIRLAQDLGTGVVWQDYLQIYAPQREGQYDA 180
Query: 182 MGIRSKSYT-----VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
+F+++ YD G + SL A+ FN + ++ +E+ +K
Sbjct: 181 SNPTDAFVKDSLVSPGALFQVKQMKYDKGYIITSLDFARHIFNRQGEITSLELRMKPDVD 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
I+K +I +LG+ V+D ++ F+
Sbjct: 241 IDKAKNDIQTLLGDKYKVLDRYEQQADTFNIM 272
>gi|315607049|ref|ZP_07882053.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
gi|315251103|gb|EFU31088.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
Length = 453
Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats.
Identities = 46/271 (16%), Positives = 95/271 (35%), Gaps = 10/271 (3%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
F +A RYLFS + I++ S IS IGV + MAL++V+SV NGF + + +
Sbjct: 47 FPFYIARRYLFSKKSTHAINVISAISVIGVAVATMALVIVLSVFNGFHDLVATLFTSFDP 106
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
+ + V + V ++ + V ++G+ ++
Sbjct: 107 QIEVVPVKGKTVPSDDPILTEIRNLPEVDVATETVEDQALAIYGDKQAMVKIKGVDDNF- 165
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ L + YG+ + + + G + G S
Sbjct: 166 AELSHITDILYGDGTFQLRAANLQYGTPGIRLAQQLGTGARWQGYMRIYAPRKDGQLDLS 225
Query: 187 KSYTVLG---------MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
+F ++ YD + + A+ F + +S +E+ +K +
Sbjct: 226 NPTEGFMVDSLLSSGVVFSVKQAKYDKDYIITPIAFARNLFEQQGMLSALEIRLKMDSDL 285
Query: 238 EKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
++ + I G+ V+D ++ + F
Sbjct: 286 DRVKAKMQAIAGDKYKVLDRFEQQEDTFKIM 316
>gi|315634392|ref|ZP_07889679.1| lipoprotein ABC superfamily ATP binding cassette transporter,
membrane protein [Aggregatibacter segnis ATCC 33393]
gi|315476982|gb|EFU67727.1| lipoprotein ABC superfamily ATP binding cassette transporter,
membrane protein [Aggregatibacter segnis ATCC 33393]
Length = 416
Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats.
Identities = 64/266 (24%), Positives = 120/266 (45%), Gaps = 5/266 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY S KN +S+ SF S +G+ +GV LI+ +S MNGF ++ +R+L + H
Sbjct: 4 PFFISWRYQRSKHKNRLVSLISFFSSMGIALGVAVLIIGLSAMNGFERELNQRILAVVPH 63
Query: 68 VVIQ----QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
I Q P+ +Q +A +L P +I V PFVS A V + V ++G+
Sbjct: 64 AEISSASGQSNAPIDHWQHLAAKLKQNPQIIGVSPFVSFTALVENG-AKLKVVQIKGVET 122
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + +F + G+++G +AR+L + GD +++L T
Sbjct: 123 ALQDQVSSLGHFVLNQGWQNFAQNGGLVLGSGIARDLDVQEGDWVSLLISQQKGTENLTQ 182
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ V G+ R+ + + Q QL VSG+E+ DP I+ +
Sbjct: 183 PLRERIQVTGILRLDGQLDHSYALMPLAQAQQLMDYQAEQVSGVELKTADPFNIQTLDYS 242
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+++ + + +W ++ + +
Sbjct: 243 MLQDYPQMLYLQNWISKFGYMYRDIQ 268
>gi|219870974|ref|YP_002475349.1| lipoprotein releasing system transmembrane protein/ABC-type
transport system, involved in lipoprotein release,
permease [Haemophilus parasuis SH0165]
gi|219691178|gb|ACL32401.1| lipoprotein releasing system transmembrane protein/ABC-type
transport system, involved in lipoprotein release,
permease component [Haemophilus parasuis SH0165]
Length = 393
Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats.
Identities = 48/268 (17%), Positives = 101/268 (37%), Gaps = 14/268 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +A+RY S + F + + ++ +G+++GVMAL++V+SVMNG + +L
Sbjct: 1 MNLTTPLFIAFRYWRSKSGDRFGRLVTNLASLGIVLGVMALVIVLSVMNGLENMQKRNLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
I H +I Q +P ++ +S + G + + G+
Sbjct: 61 SILPHAIISPIDEAWSKEQQ-----LNLPAYVEKSVPISRANVMIQSQHGINAGQLIGVE 115
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ L + V+IG LA L +++GDKI ++
Sbjct: 116 KNSDDPL---LTEVSDLAERLPAGDFNVLIGSRLANQLDLNVGDKIRLMITENSQYTPFG 172
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
+ + + + ++ +L + + E G+ +F+ DP
Sbjct: 173 RVPVQRLFTVSDIYYSNNEASAYTLFANLADIGRLLRIEEGKSQGVRLFLTDPF----LV 228
Query: 242 ENIVRILG-NGVVVIDWQQRYQIFFSCY 268
+ + +V DW+++ FF
Sbjct: 229 TELPSAFPADKWLVNDWREQKGEFFQAV 256
>gi|304384252|ref|ZP_07366663.1| conserved hypothetical protein [Prevotella marshii DSM 16973]
gi|304334568|gb|EFM00850.1| conserved hypothetical protein [Prevotella marshii DSM 16973]
Length = 410
Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats.
Identities = 53/272 (19%), Positives = 95/272 (34%), Gaps = 8/272 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RYLFS + I++ S IS IGV++ MAL++V+SV NGF + +
Sbjct: 1 MNFPFYIARRYLFSKKSTNAINVISLISVIGVIVATMALVIVLSVFNGFHDLVASLFTTF 60
Query: 65 NGHVVIQQKYYPLVDYQFIA-NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ + + V R+ P++ + QA + N
Sbjct: 61 DPQLEVVPAKGKSVPSDDPILTRIRQQPEIAVATECLEDQALAVYRDKQAMVTVKGVEDN 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
G + +IG LA+ LG +
Sbjct: 121 FTQLTHIEDILYGDGTFGLQAANLQYGVIGIRLAQVLGTGTRWNGYLKLFAPSRDADFDI 180
Query: 184 IRSKSYTVLGM-------FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
+S V+ F ++ YD G + S+ A+ F + +S +E+ +K
Sbjct: 181 TNPRSGFVVDSLFSPGVVFSVKQARYDRGYILTSIAFARSLFERQGELSSLEIKLKPDCD 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+E + I G ++D +++ F
Sbjct: 241 VEAVKTRMQHIAGEKYRILDRYEQHADTFRIM 272
>gi|259908749|ref|YP_002649105.1| outer membrane-specific lipoprotein transporter subunit LolE
[Erwinia pyrifoliae Ep1/96]
gi|224964371|emb|CAX55880.1| Lipoprotein releasing system transmembrane protein [Erwinia
pyrifoliae Ep1/96]
gi|283478722|emb|CAY74638.1| Lipoprotein releasing system, transmembrane protein [Erwinia
pyrifoliae DSM 12163]
Length = 414
Score = 108 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 50/256 (19%), Positives = 95/256 (37%), Gaps = 1/256 (0%)
Query: 14 RYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQK 73
R+ R+ +S+ S IS +G+ +GV LI+ +S MNGF ++ +R+L + H I+
Sbjct: 12 RFSRGRRRGGMVSLISAISTVGIALGVAVLIIGLSAMNGFERELNQRILAVVPHGEIEPV 71
Query: 74 YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSF 133
P +Q + ++ +P V P+++ + S V V+GI S L
Sbjct: 72 NQPFTGWQALLPKIAQVPGVAAAAPYINFTGLIESG-SKLQAVQVKGIDPQLESRLSALP 130
Query: 134 SRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLG 193
S G+ F GK I+ + + + + + +
Sbjct: 131 SYVQGHAWQSFAPGKQQILLGQGVADSLKLKQGEWLTVMIPNSDAGHKLLQPKRVRLQVA 190
Query: 194 MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVV 253
D+ + + L +AQ + V+GI + DP + + V
Sbjct: 191 GVLKLSGMLDHSLALVPLDDAQQLLGMGENVTGIAIKANDPFNAAAVVRQAGEVTHSYVY 250
Query: 254 VIDWQQRYQIFFSCYE 269
+ W Y + +
Sbjct: 251 IRSWIGTYGYMYRDIQ 266
>gi|88860113|ref|ZP_01134752.1| transport protein of outer membrane lipoproteins (ABC superfamily,
membrane) [Pseudoalteromonas tunicata D2]
gi|88818107|gb|EAR27923.1| transport protein of outer membrane lipoproteins (ABC superfamily,
membrane) [Pseudoalteromonas tunicata D2]
Length = 404
Score = 108 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 55/267 (20%), Positives = 111/267 (41%), Gaps = 4/267 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + + NAFIS SF S G+ +G+MALI V+SVMNGF + + + +L
Sbjct: 1 MFQPVSLFIGLRYSRAAKGNAFISFISFFSITGISLGLMALITVVSVMNGFEDKLKQTML 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G H+ + + L + + + + P++ +A + + +L
Sbjct: 61 GYIPHLTLAKNDQSLAEITAFNEKWQATSPIKSIAPYIKAEALLQSSADIRPILLQGLYQ 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ F + N+ ++ G F++ + + + LA L + +G++I +L P
Sbjct: 121 PTQFEAIVNTVTQ--GRWQALFEQRYSIAMSQYLASKLQLRVGEQIRVLVPSAANYTPAG 178
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ L + D + + + + N + I + + D +++
Sbjct: 179 RVPSQRLFTLVATFSTGSEVDTAIAFTGGEYVARLLKQDANTIPDIAIQLDDAFLVDELL 238
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
L +G V DW+ FS
Sbjct: 239 TR-HPELIDGFNVTDWRSVQGALFSAV 264
>gi|260583297|ref|ZP_05851072.1| lipoprotein releasing system, transmembrane protein LolE
[Haemophilus influenzae NT127]
gi|260093657|gb|EEW77570.1| lipoprotein releasing system, transmembrane protein LolE
[Haemophilus influenzae NT127]
Length = 393
Score = 108 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 106/267 (39%), Gaps = 12/267 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +A RY + + F + + ++ +G+++GVMALI+V+SVMNG ++VL
Sbjct: 1 MNFPISLYIALRYWRAKSADRFGRLVTNLASLGIVLGVMALIIVLSVMNGLEGYQKQQVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H ++ ++ L+ +P ++ ++ + + G S + GI
Sbjct: 61 SSIPHAIVSEEQPI-----STEKTLENLPHFVQKAVPINTTNVIYQTAKGVSAGQIIGIQ 115
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ L SF + N ++IG LA+ LG++IGDKI ++
Sbjct: 116 SFSDDPLVESFEQAKFNEI-LPSGEFKLVIGDQLAQKLGVNIGDKIRLMITENSQYTPFG 174
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
+ + + + + + ++ + + G +F+ DP I
Sbjct: 175 RVPMQRLFTVSDIYYGYGEASGYEAFANITDIGRLMRIQPQQAQGYRLFLNDPFLI---- 230
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + + DW+ + FF
Sbjct: 231 TELPQHFPTQ-KITDWRVQKGEFFQAV 256
>gi|258648696|ref|ZP_05736165.1| putative membrane protein [Prevotella tannerae ATCC 51259]
gi|260851000|gb|EEX70869.1| putative membrane protein [Prevotella tannerae ATCC 51259]
Length = 412
Score = 108 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 46/271 (16%), Positives = 90/271 (33%), Gaps = 6/271 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RYLFS +++ I+I S I+ GV + MA++ V+S NGF + + I
Sbjct: 1 MNFPFFIARRYLFSKKRHNAINIISSIAVGGVALATMAMVCVLSGFNGFHDLIGGLFTTI 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + + + + + + + ++GI
Sbjct: 61 DPQLEVVPTKGKVAAADDPHLDAIRKDPAVAAFSATLNDDALILFKGRPTVIRLKGIDER 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKD-LARNLGISIGDKINILSPYGDVTPMGMG 183
+ I LA +LG ++ I P +
Sbjct: 121 YADVTGIRQILYGKGDFELQRANLNYGIPGFGLANSLGGLNFGEVEICVPRKGEQINLLN 180
Query: 184 IRSKSYTVLGM-----FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
F++ YDN + L AQ F + +S +E+ +K
Sbjct: 181 PAENINVGTLQSSNLCFQVYQSKYDNNYMLCPLSFAQDLFEKQGCISALELKLKSDADEA 240
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
E + ++ G V+D ++ + F+ +
Sbjct: 241 DVKERLQKLAGPTFKVMDRYEQQEGTFNVMK 271
>gi|319897173|ref|YP_004135368.1| outer membrane-specific lipoprotein transporter subunit
[Haemophilus influenzae F3031]
gi|317432677|emb|CBY81040.1| outer membrane-specific lipoprotein transporter subunit
[Haemophilus influenzae F3031]
Length = 393
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 103/267 (38%), Gaps = 12/267 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +A RY + + F + + ++ +G+++GVMALI+V+SVMNG ++VL
Sbjct: 1 MNFPISLYIALRYWRAKSADRFGRLVTNLASLGIVLGVMALIIVLSVMNGLEGYQKQQVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H ++ ++ L+ +P ++ ++ + + G S + GI
Sbjct: 61 SSIPHAIVSEEQPI-----STEKTLENLPHFVQKAVPINTTNVIYQTAKGVSAGQIIGIQ 115
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ L SF ++IG LA+ LG++IGDKI ++
Sbjct: 116 SFSDDPLVESF-EQTKFNEILPSGEFKLVIGDQLAQKLGVNIGDKIRLMITENSQYTPFG 174
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
+ + + + + ++ + + G +F+ DP I
Sbjct: 175 RAPMQRLFTVSDIYYDYGEASGYEAFANITDIGRLMRIQPQQAQGYRLFLNDPFQI---- 230
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + + DW+ + FF
Sbjct: 231 TELPQHFPIQ-KITDWRVQKGEFFQAV 256
>gi|310767354|gb|ADP12304.1| outer membrane-specific lipoprotein transporter subunit LolE
[Erwinia sp. Ejp617]
Length = 414
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 50/256 (19%), Positives = 95/256 (37%), Gaps = 1/256 (0%)
Query: 14 RYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQK 73
R+ R+ +S+ S IS +G+ +GV LI+ +S MNGF ++ +R+L + H I+
Sbjct: 12 RFSRGRRRGGMVSLISAISTVGIALGVAVLIIGLSAMNGFERELNQRILAVVPHGEIEPV 71
Query: 74 YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSF 133
P +Q + ++ +P V P+++ + S V V+GI S L
Sbjct: 72 NQPFTGWQALLPKIAQVPGVAAAAPYINFTGLIESG-SKLQAVQVKGIDPQLESRLSALP 130
Query: 134 SRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLG 193
S G+ F GK I+ + + + + + +
Sbjct: 131 SYVQGHAWQSFAPGKQQILLGQGVADSLKLKQGEWLTVMIPNSDAGHKLLQPKRVRLQVA 190
Query: 194 MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVV 253
D+ + + L +AQ + V+GI + DP + + V
Sbjct: 191 GVLKLSGMLDHSLALVPLDDAQQLLGMGENVTGIAIKANDPFNAAAVVRQAGDVTHSYVY 250
Query: 254 VIDWQQRYQIFFSCYE 269
+ W Y + +
Sbjct: 251 IRSWIGTYGYMYRDIQ 266
>gi|260173074|ref|ZP_05759486.1| hypothetical protein BacD2_14478 [Bacteroides sp. D2]
gi|315921351|ref|ZP_07917591.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313695226|gb|EFS32061.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 408
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 55/273 (20%), Positives = 101/273 (36%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RYLFS +K+ I+I S IS GV + +AL+ +SV NGF++ +
Sbjct: 1 MNFPFYIARRYLFSKKKHNAINIISGISVCGVALATLALVCTLSVFNGFQDMVASFFTAF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + I + + D Q R ++V + + + V+++G+ ++
Sbjct: 61 DPQLKITVREGKVFDAQDKRIRAVCALPEVEVFTETLEENAMVQYKDRQAMVVLKGVEDN 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKG---VIIGKDLARNLGISIGDKINILSPYGD----- 176
+ D + + G+ D + + P +
Sbjct: 121 FEELTAIDSILYGAGEFVLHDSIVNYGVMGVELVATLGTGLEFVDPLQVYLPKRNAKVNM 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
P R Y+ +F + +YD + SL + + VS +E+ +K
Sbjct: 181 ANPGASFNRDYLYSPGVVFVVNQQEYDGKYILTSLDFLRELLDYTTEVSAMELKLKTNVN 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
I I ILG+ VV + Q+ F E
Sbjct: 241 ISSVQSKIENILGDDFVVQNRYQQQADVFRIME 273
>gi|237711570|ref|ZP_04542051.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|229454265|gb|EEO59986.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
Length = 412
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 55/273 (20%), Positives = 95/273 (34%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RYLFS + + I++ S IS GV + +AL+ +SV NGF++ +
Sbjct: 1 MNFPFYIAKRYLFSKKSHNAINVISAISVCGVALATLALVCTLSVFNGFQDLVATFFTAF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + I + D Q I V + + + +++GI ++
Sbjct: 61 DPELKITAVTGKVFDGQEARIEALRRMPEIAVFSESLEENAMVQYKDRQTMAVIKGIEDN 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIG-----KDLARNLGISIGDKINILSPYGDVTP 179
F D I L + +I V
Sbjct: 121 FEDLTAIDSILFGRGQFVLHDEVVDYAIPGIELVSILGTGIKFLDPLEIYAPKRGVKVNM 180
Query: 180 MGMGIRSKS---YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
S Y+ +F + YD+ + SLQ A+ F + VS +E+ +K
Sbjct: 181 ANPASSFNSADLYSSGLVFAVNQQKYDSSYILTSLQFARRLFQYDTEVSSVELKLKPDVD 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I +ILG+ V D ++ F E
Sbjct: 241 VGSVKSKIQKILGDDFRVQDRYEQQADTFRIME 273
>gi|322513495|ref|ZP_08066605.1| lipoprotein-releasing ABC superfamily ATP binding cassette
transporter, membrane protein [Actinobacillus ureae ATCC
25976]
gi|322120714|gb|EFX92598.1| lipoprotein-releasing ABC superfamily ATP binding cassette
transporter, membrane protein [Actinobacillus ureae ATCC
25976]
Length = 390
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 45/261 (17%), Positives = 94/261 (36%), Gaps = 13/261 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A+RY S + F + + + G+++GVMAL++V+SVMNG + +L H
Sbjct: 6 LFIAFRYWRSKSADRFGRLVTNLVSFGIVLGVMALVIVLSVMNGLENMQKRNLLSTLPHA 65
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
++ + Q + V V Q+ + G +
Sbjct: 66 IVLPQEGYFDKNQSLNLPAFASKSVAINKANVIIQS---------QQGINAGQLLGVENE 116
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ V+IG LA L I G+KI ++ + +
Sbjct: 117 SDDPMLFGENVKVLLPQGEFNVLIGSPLANKLNIGTGEKIRLMITENSQYTPMGRVPVQR 176
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ + ++ +L + + E+ V G+ ++++DP + + +
Sbjct: 177 LFNVVGIYHTNNEASEYTLFANLADVGRLLRITEDQVQGMRLYLQDPFQVTELSQYFDA- 235
Query: 248 LGNGVVVIDWQQRYQIFFSCY 268
N + DW+++ FF
Sbjct: 236 --NNYKISDWREQKGEFFQAV 254
>gi|109898675|ref|YP_661930.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudoalteromonas atlantica T6c]
gi|109700956|gb|ABG40876.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Pseudoalteromonas atlantica T6c]
Length = 411
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 54/265 (20%), Positives = 97/265 (36%), Gaps = 1/265 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+AWR+ S ++N +IS S S G+ +G LI+++SVMNGF ++ R+L I
Sbjct: 1 MNLIFQLAWRFRSSKQQNGYISFISASSTFGIALGCFVLILLLSVMNGFERELKDRLLSI 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H + + I+ + + + + + GI
Sbjct: 61 IPHGELYAVSSQGISDWQKEVTALQSDPRIESVQPYTKATGMLQKGKKMKAIELVGIDTK 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
S +GV++G LGI +GDK+ +L P
Sbjct: 121 YAENDGMLSSVPAEQWQAFSANQQGVMLGAGAMAKLGILLGDKVKLLLPQLSDDLSIRAP 180
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
++ TV+G ++ ++ + YM L A + + V G+ DP A I
Sbjct: 181 KTLWLTVVGEVKIGGELDNH-IGYMHLPLASETLGVTHGVQGLRFRYHDPFAAPMITREI 239
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
+ V + DW + + +
Sbjct: 240 GYGFPHEVFMSDWTRTQGHLYQDIQ 264
>gi|300716255|ref|YP_003741058.1| Lipoprotein releasing system transmembrane protein [Erwinia
billingiae Eb661]
gi|299062091|emb|CAX59207.1| Lipoprotein releasing system transmembrane protein [Erwinia
billingiae Eb661]
Length = 414
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 102/267 (38%), Gaps = 1/267 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +++ R+ R++ +S+ S IS +G+ +GV LIV +S MNGF ++ R+L
Sbjct: 1 MAGNLSLLLGLRFSRGRRRSGMVSLISVISTVGIALGVAVLIVGLSAMNGFERELNNRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H I+ P +Q + +++ + + P+++ + + V V+G+
Sbjct: 61 AVVPHGEIEPVNQPFTGWQQLLPKVEQVKGIAAAAPYINFTGLIESG-AKLQAVQVKGVD 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ L N F GK II + +
Sbjct: 120 PQQENNLSALPKYVQNNAWQSFSAGKQQIILGQGVATSLKVKQGDWLTIMIPNSDPEHKL 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + D+ + + L +AQ Y + + V+GI + + DP A +K
Sbjct: 180 LQPKRVRLQVSGILALSGMLDHSLALVPLGDAQQYLGMGDNVTGIALKMSDPFAAQKLVR 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + V + W Y + +
Sbjct: 240 DAGEVTHSYVYIRSWIGTYGYMYRDIQ 266
>gi|223041841|ref|ZP_03612029.1| outer membrane-specific lipoprotein transporter subunit LolE
[Actinobacillus minor 202]
gi|223017334|gb|EEF15757.1| outer membrane-specific lipoprotein transporter subunit LolE
[Actinobacillus minor 202]
Length = 416
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 49/269 (18%), Positives = 109/269 (40%), Gaps = 5/269 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ ++WRY +KN +S+ S S +G+ +GV LI+ +S MNGF ++ +RVL +
Sbjct: 1 MKASFFISWRYQRGKQKNRLVSLISLFSTMGIALGVAVLIIGLSAMNGFERELNQRVLSV 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS---GVLVRGI 121
H + + + +L+ + + + V+ + L G+ VRG+
Sbjct: 61 VPHAELFSYSHQGNQPIKESAKLESLVKQNQNVRAVAPFVSFTALIENGTALKIAQVRGV 120
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ + F + G+I+G +A++L ++ GD++ +L P
Sbjct: 121 DPAKQDQVSQIGQFVPAAQWQQFHQEGGLILGAGIAKSLDVNAGDEVTLLLPQPAEDGK- 179
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKT 240
+ + + D+ + L++AQ N +SG+E+ + P +
Sbjct: 180 LAQPLRFNLPVTGILKLEGQLDHSYALLPLEKAQELLEYRLNEISGLELALTSPFEAQML 239
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + W ++ ++ +
Sbjct: 240 ELPQLETFKQPLYLNTWINKFGYMYNDIQ 268
>gi|325578173|ref|ZP_08148308.1| lipoprotein ABC superfamily ATP binding cassette transporter,
membrane protein [Haemophilus parainfluenzae ATCC 33392]
gi|325159909|gb|EGC72038.1| lipoprotein ABC superfamily ATP binding cassette transporter,
membrane protein [Haemophilus parainfluenzae ATCC 33392]
Length = 393
Score = 108 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 47/267 (17%), Positives = 91/267 (34%), Gaps = 12/267 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + VA RY + + F + + ++ G+++GVMALI+V+SVMNG ++VL
Sbjct: 1 MNLPISLYVALRYWRAKSADRFGRLVANLASFGIVLGVMALIIVLSVMNGLEGYQKQQVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H ++ Q + V V Q + G+
Sbjct: 61 STIPHAIVSQDTPISAEKTLENTPHFVQKAVPINTTNVVFQTAKGVSAGQVIGIQSFSDD 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+IIG +LA+ LG+++GDK+ ++
Sbjct: 121 P------LLEGFDPSQFNQLLPQGEFKLIIGDNLAQKLGLAVGDKVRLMITENSQYTPFG 174
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
+ + + + + V+ +L + + G +F+ DP I +
Sbjct: 175 RVPMQRLFTVSEIYYDYGEASGYEVFANLADIGRLMRIQPGEAQGYRLFLDDPFQITELP 234
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ DW+ + FF
Sbjct: 235 TYFKES-----HISDWRVQKGEFFQAV 256
>gi|212695393|ref|ZP_03303521.1| hypothetical protein BACDOR_04942 [Bacteroides dorei DSM 17855]
gi|212662028|gb|EEB22602.1| hypothetical protein BACDOR_04942 [Bacteroides dorei DSM 17855]
Length = 412
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 55/273 (20%), Positives = 95/273 (34%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RYLFS + + I++ S IS GV + +AL+ +SV NGF++ +
Sbjct: 1 MNFPFYIAKRYLFSKKSHNAINVISAISVCGVALATLALVCTLSVFNGFQDLVATFFTAF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + I + D Q I V + + + +++GI ++
Sbjct: 61 DPELKITAVTGKVFDGQEARIEALRRMPEIAVFSESLEENAMVQYKDRQTMAVIKGIEDN 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIG-----KDLARNLGISIGDKINILSPYGDVTP 179
F D I L + +I V
Sbjct: 121 FEDLTAIDSILFGRGQFVLHDEVVDYAIPGIELVSILGTGIKFLDPLEIYAPKRGVKVNM 180
Query: 180 MGMGIRSKS---YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
S Y+ +F + YD+ + SLQ A+ F + VS +E+ +K
Sbjct: 181 ANPASSFNSADLYSSGLVFAVNQQKYDSSYILTSLQFARRLFQYDTEVSSVELKLKPDVD 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I +ILG+ V D ++ F E
Sbjct: 241 VGSVKSKIQKILGDDFRVQDRYEQQADTFRIME 273
>gi|301156080|emb|CBW15551.1| outer membrane-specific lipoprotein transporter subunit
[Haemophilus parainfluenzae T3T1]
Length = 393
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 46/267 (17%), Positives = 91/267 (34%), Gaps = 12/267 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + VA RY + + F + + ++ G+++GVMALI+V+SVMNG ++VL
Sbjct: 1 MNLPISLYVALRYWRAKSADRFGRLVANLASFGIVLGVMALIIVLSVMNGLEGYQKQQVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H ++ Q+ + V V Q + G+
Sbjct: 61 SSIPHAIVSQEAPISAEKPLENTPHFVQKAVPINTTNVVFQTAKGVSAGQVIGIQSFSDD 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+I+G LA+ LG+++GDK+ ++
Sbjct: 121 P------LLEDIDPSQFNQLLPQGEFKLIMGDKLAQKLGLAVGDKVRLMITENSQYTPFG 174
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
+ + + + + V+ +L + + G +F+ DP I +
Sbjct: 175 RVPMQRLFTVSELYYDYGEASGYEVFANLADIGRLMRIQPGEAQGYRLFLDDPFQITEL- 233
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ DW+ + FF
Sbjct: 234 ----PTYFKDSHISDWRVQKGEFFQAV 256
>gi|167950861|ref|ZP_02537935.1| lipoprotein ABC transporter, permease protein LolE [Endoriftia
persephone 'Hot96_1+Hot96_2']
Length = 215
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 68/202 (33%), Positives = 111/202 (54%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ FE+ + RY + R+N FIS S IS +G+M+GV+ALIVV+SVMNGF +++ +R+L
Sbjct: 1 MYKPFELFIGLRYTRAKRRNHFISFISLISTLGIMLGVVALIVVLSVMNGFHKEVRERIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I L D++ + + P VI P+V GQ +L
Sbjct: 61 GMASHATISAVKGGLSDWRDVMAQAGKNPHVIGRAPYVEGQGMFINGQKVSGAILRGIDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G+V++ G GVI+G++LA LG+ +GDK+ +++P +VTP G+
Sbjct: 121 AEEGKVSVVVEAMKVGSVTDLQPGGYGVILGQELAYLLGVGMGDKVTLVTPQINVTPAGI 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDN 204
R K + V G+F + DY+
Sbjct: 181 MPRLKRFKVTGIFEVGMGDYEP 202
>gi|237721799|ref|ZP_04552280.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|293372465|ref|ZP_06618849.1| efflux ABC transporter, permease protein [Bacteroides ovatus SD CMC
3f]
gi|299144798|ref|ZP_07037866.1| putative membrane protein [Bacteroides sp. 3_1_23]
gi|229448668|gb|EEO54459.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|292632648|gb|EFF51242.1| efflux ABC transporter, permease protein [Bacteroides ovatus SD CMC
3f]
gi|298515289|gb|EFI39170.1| putative membrane protein [Bacteroides sp. 3_1_23]
Length = 408
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 55/273 (20%), Positives = 101/273 (36%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RYLFS +K+ I+I S IS GV + +AL+ +SV NGF++ +
Sbjct: 1 MNFPFYIARRYLFSKKKHNAINIISGISVCGVALATLALVCTLSVFNGFQDMVASFFTAF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + I + + D Q R ++V + + + V+++G+ ++
Sbjct: 61 DPQLKITVREGKVFDAQDERIRAVCALPEVEVFTETLEENAMVQYKDRQAMVVLKGVEDN 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKG---VIIGKDLARNLGISIGDKINILSPYGDV---- 177
+ D + + G+ D + + P +V
Sbjct: 121 FEELTAIDSILYGAGEFVLHDSIVNYGVMGVELVATLGTGLEFVDPLQVYLPKRNVKVNM 180
Query: 178 -TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
P R Y+ +F + +YD + SL + + VS +E+ +K
Sbjct: 181 ANPGASFNRDYLYSPGVVFVVNQQEYDGKYILTSLDFLRQLLDYTTEVSAMELKLKPNVN 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
I ILG+ VV + Q+ F E
Sbjct: 241 TSSVQSKIENILGDDFVVQNRYQQQADVFRIME 273
>gi|148826789|ref|YP_001291542.1| glycerate dehydrogenase [Haemophilus influenzae PittGG]
gi|148718031|gb|ABQ99158.1| glycerate dehydrogenase [Haemophilus influenzae PittGG]
Length = 358
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 107/267 (40%), Gaps = 12/267 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +A RY + + F + + ++ +G+++GVMALI+V+SVMNG ++VL
Sbjct: 1 MNFPISLYIALRYWRAKSADRFGRLVTNLASLGIVLGVMALIIVLSVMNGLEGYQKQQVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H ++ ++ L+ +P ++ ++ + + G S + GI
Sbjct: 61 SSIPHAIVSEEQPI-----STEKTLENLPHFVQKAVPINTTNVIYQTAKGVSAGQIIGIQ 115
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ L SF + N ++IG LA+ LG++IGDKI ++
Sbjct: 116 SFSDDPLVESFDQTKFNEI-LPSGEFKLVIGDQLAQKLGVNIGDKIRLMITENSQYTPFG 174
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
+ + + + + + ++ + + G +F+ DP I +
Sbjct: 175 RVPMQRLFTVSDIYYGYGEASGYEAFANITDIGRLMRIQPQQAQGYRLFLNDPFQITELP 234
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
++ + DW+ + FF
Sbjct: 235 QHFSTQ-----KITDWRVQKGEFFQAV 256
>gi|317504479|ref|ZP_07962457.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
gi|315664422|gb|EFV04111.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
Length = 414
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 45/273 (16%), Positives = 92/273 (33%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F + +A RYLFS + I++ S IS IGV + MAL++V+SV NGF + +
Sbjct: 1 MNFPLYIAKRYLFSKKSTNAINVISVISVIGVAVATMALVIVLSVFNGFHDLVATFFTNF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + + + V ++ + V+V+G+ ++
Sbjct: 61 DPQLEVVPTQGKTAPSDDPLLAKMKALPSVDVATESVEDQALALYKGQQAMVIVKGVDDN 120
Query: 125 DFSYLQNSFSRFYGNVSNDF-----DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
F + G+ + L +I G
Sbjct: 121 FDQLTHVKDILFGDGTYSLHAGNLQYGIMGIRLAAALGTGARFGDYLRIYAPQKEGQFDA 180
Query: 180 MGMGIRSKSY---TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
+ +F + YD + + A+ F + +S +E +K+
Sbjct: 181 ANPTQAFVVDSLLSPGVVFAVNQSKYDKNYIIAPIAFARNLFGQQGRLSSLEFRLKNGSD 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ + + I G+ V+D ++ F +
Sbjct: 241 LDAVKKEMQSIGGSKYKVMDRFEQQADTFKIMQ 273
>gi|298479977|ref|ZP_06998176.1| membrane protein [Bacteroides sp. D22]
gi|298273786|gb|EFI15348.1| membrane protein [Bacteroides sp. D22]
Length = 408
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 54/273 (19%), Positives = 100/273 (36%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RYLFS +K+ I+I S IS GV + +AL+ +SV NGF++ +
Sbjct: 1 MNFPFYIARRYLFSKKKHNAINIISGISVCGVALATLALVCTLSVFNGFQDMVASFFTAF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + I + + D Q R ++V + + + V+++G+ ++
Sbjct: 61 DPQLKITVREGKVFDAQDERIRAVCALPEVEVFTETLEENAMVQYKDRQAMVVLKGVEDN 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKG---VIIGKDLARNLGISIGDKINILSPYGD----- 176
+ D + + G+ D + + P +
Sbjct: 121 FEELTAIDSILYGAGEFVLHDSIVNYGVMGVELVATLGTGLEFVDPLQVYLPKRNAKVNM 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
P R Y+ +F + +YD + SL + + VS +E+ +K
Sbjct: 181 ANPGASFNRDYLYSPGVVFVVNQQEYDGKYILTSLDFLRQLLDYTTEVSAMELKLKPNVN 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
I ILG+ VV + Q+ F E
Sbjct: 241 TSSVQSKIENILGDDFVVQNRYQQQADVFRIME 273
>gi|312129255|ref|YP_003996595.1| hypothetical protein Lbys_0468 [Leadbetterella byssophila DSM
17132]
gi|311905801|gb|ADQ16242.1| protein of unknown function DUF214 [Leadbetterella byssophila DSM
17132]
Length = 404
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 35/268 (13%), Positives = 89/268 (33%), Gaps = 4/268 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+A +Y S +K +FI S IS +GV IG+ ALI+++SV NG + +
Sbjct: 1 MNLSFFIAKKYFLSKKKRSFIHFISLISMLGVGIGLAALIIILSVFNGLEDLNREIFKSF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + I K + + + V ++ + V ++G+ +
Sbjct: 61 DPDLKISAKTSKSFHPDADFLQRIRSTEGVAYCTEVYQDKALAKNQRAQTIVDIKGVDTT 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN----ILSPYGDVTPM 180
+ G + IG + L +++ D + + +
Sbjct: 121 FALNKDFQKALVGGEMKVYVGPRAAAFIGAGVYNTLELTVNDFFKPIELLYPKNEKLNAL 180
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
++ + + VY+ ++ + + +E+ ++ +++
Sbjct: 181 NPESNVNRVSLEISGVFLLEQHYDNFVYLPIEVMEDLNEQVGRRTSLEINIQQGKDVQRI 240
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + L + + D ++
Sbjct: 241 KAALKKFLPENLQIQDRDEQNASLLRAI 268
>gi|88860116|ref|ZP_01134755.1| putative lipoprotein releasing system transmembrane protein
[Pseudoalteromonas tunicata D2]
gi|88818110|gb|EAR27926.1| putative lipoprotein releasing system transmembrane protein
[Pseudoalteromonas tunicata D2]
Length = 410
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 53/266 (19%), Positives = 105/266 (39%), Gaps = 3/266 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ ++ R+ + R N FI S G+ +G+ LIV +SV NGF + +++R+L +
Sbjct: 1 MNLSLFLSQRFRKAKRDNGFIGFIGKASSAGIGLGIAVLIVALSVFNGFEQQLVERLLAV 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
HV + P+ ++ +L +V PF+ + + +
Sbjct: 61 VPHVEYEAPNRPINNWPSKVKQLADHSEVAAASPFIKLNGMAQFKNELKAVEVSAIDPAF 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + +F + +I+GK + LG++IGD I +L P + +
Sbjct: 121 ETEV--SDIGKFISPTPLQALQKGQIILGKQIFEALGVNIGDSITVLLPNLNTKSDHLAA 178
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHEN 243
K V+ D+ + L +AQ +L + V G+ + + D +T +
Sbjct: 179 AKKLRLVVVGQIAMGGPVDHSTGLIHLSQAQDLLDLSADQVMGLRLKLYDVFNAHRTAMS 238
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
I L + V V W + + +
Sbjct: 239 IGSELNDYVYVNTWFRSQGNLYQDIQ 264
>gi|149280543|ref|ZP_01886660.1| putative lipoprotein releasing system transmembrane protein
[Pedobacter sp. BAL39]
gi|149228725|gb|EDM34127.1| putative lipoprotein releasing system transmembrane protein
[Pedobacter sp. BAL39]
Length = 410
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 49/262 (18%), Positives = 94/262 (35%), Gaps = 5/262 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A RYLF+ + I+I S IS +GV +G ALI+++SV NGF E ++K +
Sbjct: 4 AFYIARRYLFAKKSTNAINIISTISVLGVFVGSAALIIILSVFNGFEEVVLKMFNTMTPQ 63
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
VVI + + + + I V + + + S LV+G+
Sbjct: 64 VVIMPEKGKTFEPGTEYFQQLKLDKSIYSYVEVLSENALLRYNDKQSVGLVKGVGPEYLK 123
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ G+ +IG + L ++ D N L Y +
Sbjct: 124 NKSLDSTIIDGHFLLGAADADYAVIGSAIQNFLMVNTTDPFNPLQIYSPKKGARPSNINP 183
Query: 188 SYTVLG-----MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + + L A+ + +S IE+ + ++ +
Sbjct: 184 GDDFTMLSIPVSGVFEVQQDFDNVAIVPLAFARRLLDEPTKISAIEINLNKGVDADQFKD 243
Query: 243 NIVRILGNGVVVIDWQQRYQIF 264
+ + + G V D Q+ ++
Sbjct: 244 KLEQTIPKGFEVKDRIQQNKVL 265
>gi|240950337|ref|ZP_04754607.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus minor NM305]
gi|240295148|gb|EER45967.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus minor NM305]
Length = 390
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 50/266 (18%), Positives = 92/266 (34%), Gaps = 13/266 (4%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ +A RY + + F + + ++ G+++GVMALI+++SVMNG + +L
Sbjct: 1 MNLTPFFIACRYWRAKSADRFGRLVTNLASFGIVLGVMALIIMLSVMNGLENMQKRNLLS 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
H VI Q + I V V Q+ + G
Sbjct: 61 TLPHAVISPLEGHFSKMQQLTLPEFVIKQVPINRTNVMIQS---------QQGINAGQLI 111
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ V+IG LA L I +GDKI ++
Sbjct: 112 GVEQENDDPLLTGENIAQLLPQGEFNVLIGSRLADKLKIGVGDKIRLMITENSQYTPMGR 171
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHE 242
+ + + + ++ +L + + E+ V GI +F+ DP + +
Sbjct: 172 VPVQRLFHISGIYYSNNEASEYTLFANLADVGRLLRITEDQVQGIRLFLTDPFKVTELPF 231
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCY 268
+ V DW+++ FF
Sbjct: 232 SFDE---TQYQVSDWREQKGEFFQAV 254
>gi|170717660|ref|YP_001784737.1| outer membrane-specific lipoprotein transporter subunit LolE
[Haemophilus somnus 2336]
gi|168825789|gb|ACA31160.1| lipoprotein releasing system, transmembrane protein LolE
[Haemophilus somnus 2336]
Length = 416
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 56/266 (21%), Positives = 107/266 (40%), Gaps = 5/266 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY +S KN +S+ + S IG+ +GV LIV +S MNGF ++ +R+L + H
Sbjct: 4 PFFISWRYQYSRSKNKLVSLIALFSTIGIALGVAVLIVGLSAMNGFERELNQRILSVVPH 63
Query: 68 VVIQQKYYPLVDYQFIANRLD---FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
I ++ + + + VRGI
Sbjct: 64 SEIISYQEQGNVKIESRQKITALLQQDPNVLAQSPFVEFTALIENGTKLKVAQVRGIEQV 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ N + F + G+++G +A+ LG+S D + +L + +
Sbjct: 124 TQDQVSNLSKFVLNDGWQQFQKNGGLVLGYGIAKELGVSENDWVTLLISFANSDNQLSQP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHEN 243
V G+ R D+ MSL +AQ+ + + ++G+E+ V+DP A+
Sbjct: 184 LRYRIQVTGILR-LDGQLDHSYALMSLSQAQVLLDYTPDEITGVELKVQDPFAVRNMTYE 242
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + V DW ++ ++ +
Sbjct: 243 YLYDYPQRLQVQDWIGKFGYMYNDIQ 268
>gi|307565013|ref|ZP_07627530.1| efflux ABC transporter, permease protein [Prevotella amnii CRIS
21A-A]
gi|307346326|gb|EFN91646.1| efflux ABC transporter, permease protein [Prevotella amnii CRIS
21A-A]
Length = 410
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 51/274 (18%), Positives = 102/274 (37%), Gaps = 10/274 (3%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RY+FS + I++ S IS IGV + MAL+VVMS NGF + + G
Sbjct: 1 MNFSFYIARRYIFSKKSTHAINVISLISVIGVAVATMALVVVMSGFNGFADLVASFFTGF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + I+ + + + V ++ ++++G+ +
Sbjct: 61 DPQIKIEAATGKAMPADDPLLKKVKHLKEVAVSTECVEDQALAVYHGNQKMIMIKGMEAN 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
L + + YG+ + + + + G G
Sbjct: 121 -LDSLTHISNICYGDGDLNLETANLQYGLLGVRVAQDLGTGVFWRDYLYIYAPQREGQYD 179
Query: 185 RSKSYT---------VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD 235
+ +F+++ YD G + SL A+ FN + ++ +E+ +K+
Sbjct: 180 PTDPTQSFVKDSLISPGLVFQVKQNKYDGGYIITSLNFARRLFNRQGQITSLELRMKEGV 239
Query: 236 AIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
I K E I I+G+ V + ++ F+ +
Sbjct: 240 DINKIQEKIKSIVGSKYTVKNRYEQQADTFNIMK 273
>gi|288926933|ref|ZP_06420831.1| membrane protein [Prevotella buccae D17]
gi|288336292|gb|EFC74675.1| membrane protein [Prevotella buccae D17]
Length = 437
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 46/271 (16%), Positives = 95/271 (35%), Gaps = 10/271 (3%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
F +A RYLFS + I++ S IS IGV + MAL++V+SV NGF + + +
Sbjct: 31 FPFYIARRYLFSKKSTHAINVISAISVIGVAVATMALVIVLSVFNGFHDLVATLFTSFDP 90
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
+ + V + V ++ + V ++G+ ++
Sbjct: 91 QIEVVPVKGKTVPADDPILTEIRNLPEVDVATETVEDQALAIYGDKQAMVKIKGVDDNF- 149
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ L + YG+ + + + G + G S
Sbjct: 150 AELSHITDILYGDGTFQLRAANLQYGTPGIRLAQQLGTGARWQGYMRIYAPRKDGQLDLS 209
Query: 187 KSYTVLG---------MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
+F ++ YD + + A+ F + +S +E+ +K +
Sbjct: 210 NPTEGFMVDSLLSSGVVFSVKQAKYDKDYIITPIAFARNLFEQQGMLSALEIRLKMDSDL 269
Query: 238 EKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
++ + I G+ V+D ++ + F
Sbjct: 270 DRVKAKMQAIAGDKYKVLDRFEQQEDTFKIM 300
>gi|331006722|ref|ZP_08329997.1| Lipoprotein releasing system transmembrane protein LolE [gamma
proteobacterium IMCC1989]
gi|330419475|gb|EGG93866.1| Lipoprotein releasing system transmembrane protein LolE [gamma
proteobacterium IMCC1989]
Length = 431
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 53/284 (18%), Positives = 115/284 (40%), Gaps = 18/284 (6%)
Query: 3 IFSRFE----VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMI 58
+FS +++ RY + +++ ++ S ++ +G+++GV LIVV+SVMNGF +++
Sbjct: 1 MFSALSNSVSLLLGLRYTIARQRSRSVAFISRVTMMGIVLGVSLLIVVLSVMNGFDKELR 60
Query: 59 KRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
+R+L I V + + D+ F+ +L +I V PFV QA V+ + ++
Sbjct: 61 ERILQIMP-QVTLYQTGGMQDWSFLREQLLSNEQIIGVSPFVELQAMVNVGKNTEPTLIY 119
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
+ + + +++G+ LA LG+++G K++++ P +
Sbjct: 120 GIDHQLESTTSIIHQFLQPKTRLELVNNKGAIVLGRGLADTLGVNVGSKVSVIVPRAEGQ 179
Query: 179 PMGMGIRSKSYTVLGMFRMRFP----------DYDNGMVYMSLQEAQLYFNLENA---VS 225
IR + + + + N ++ VS
Sbjct: 180 SAPPAIRRLQVIDILNTGTEIDAALALMDIRVAASLSVYGTPISADEKSNNADDQSLVVS 239
Query: 226 GIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
G+ + + D A N+ L G +W + + + +
Sbjct: 240 GVHLKLDDLFAAASLANNLQAQLPYGFYTTNWTRTHGNIYYAIQ 283
>gi|260580329|ref|ZP_05848158.1| lipoprotein releasing system, transmembrane protein LolE
[Haemophilus influenzae RdAW]
gi|260093006|gb|EEW76940.1| lipoprotein releasing system, transmembrane protein LolE
[Haemophilus influenzae RdAW]
Length = 416
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 53/266 (19%), Positives = 111/266 (41%), Gaps = 5/266 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY +KN +++ + S IG+ +GV LIV +S MNGF ++ +R+L + H
Sbjct: 4 PFFISWRYQRGKQKNPLVALIAKFSAIGIALGVAVLIVGLSAMNGFERELNQRILAVVPH 63
Query: 68 VV----IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ +Q + RL P + + PFVS A V S V V+G+
Sbjct: 64 AEILSAPNATDPTIHHWQNLEKRLQQNPQIKGISPFVSFTALVENG-SKLKVVQVKGVEK 122
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + N F++ G+++G +A+ L + +GD I +L +
Sbjct: 123 QAEDKVSSIGNFVQEQGWNKFEKEGGLVLGSGIAKELDVKVGDWITLLISQQNGDEQFAQ 182
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ V + R+ + + Q + ++G+E+ + DP + +
Sbjct: 183 PTREPVQVTSILRLDGQLDYSYALLPLAQAQTFLTYQPDQITGVELKLDDPFSARNLDLS 242
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
++ + + +W ++ + +
Sbjct: 243 MLNDYPQMLYMQNWISKFGYMYRDIQ 268
>gi|16273448|ref|NP_439697.1| outer membrane-specific lipoprotein transporter subunit LolE
[Haemophilus influenzae Rd KW20]
gi|1175890|sp|P44250|LOLE_HAEIN RecName: Full=Lipoprotein-releasing system transmembrane protein
lolC
gi|1574393|gb|AAC23198.1| conserved hypothetical transmembrane protein [Haemophilus
influenzae Rd KW20]
Length = 416
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 53/266 (19%), Positives = 111/266 (41%), Gaps = 5/266 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY +KN +++ + S IG+ +GV LIV +S MNGF ++ +R+L + H
Sbjct: 4 PFFISWRYQRGKQKNPLVALIAKFSAIGIALGVAVLIVGLSAMNGFERELNQRILAVVPH 63
Query: 68 VV----IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ +Q + RL P + + PFVS A V S V V+G+
Sbjct: 64 AEILSAPNATEPTIHHWQNLEKRLQQNPQIKGISPFVSFTALVENG-SKLKVVQVKGVEK 122
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + N F++ G+++G +A+ L + +GD I +L +
Sbjct: 123 QAEDKVSSIGNFVQEQGWNKFEKEGGLVLGSGIAKELDVKVGDWITLLISQQNGDEQFAQ 182
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ V + R+ + + Q + ++G+E+ + DP + +
Sbjct: 183 PTREPVQVTSILRLDGQLDYSYALLPLAQAQTFLTYQPDQITGVELKLDDPFSARNLDLS 242
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
++ + + +W ++ + +
Sbjct: 243 MLNDYPQMLYMQNWISKFGYMYRDIQ 268
>gi|251789261|ref|YP_003003982.1| outer membrane-specific lipoprotein transporter subunit LolE
[Dickeya zeae Ech1591]
gi|247537882|gb|ACT06503.1| lipoprotein releasing system, transmembrane protein LolE [Dickeya
zeae Ech1591]
Length = 415
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 59/266 (22%), Positives = 111/266 (41%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F ++V R+ R++ +S+ S IS +G+ +GV LIV +S MNGF ++ R+L
Sbjct: 3 FPPLSLLVGLRFSRGRRRSGMVSLISVISTLGIALGVAVLIVGLSAMNGFERELNNRILA 62
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ H I+ P ++Q + +++ +P V P+VS + +S +
Sbjct: 63 VVPHGEIEAGEQPFKNWQPLLPKVEQVPGVAAAAPYVSFTGLLENGASLKAIQFKGVDPQ 122
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ S + VIIGK +A LG+ GD + ++ P D M +
Sbjct: 123 QELKLSALPQFVQDNAWSRFHAGTQQVIIGKGVADTLGVKSGDWVTVMIPNSD-PQMKLL 181
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ + D+ + + L +AQ Y +L + ++GI + +D A +K +
Sbjct: 182 QPKRIRLQVAGILQLSGQLDHSLALVPLADAQQYLDLGDGITGIAIKAQDVFAAQKLVHD 241
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
V + W Y + +
Sbjct: 242 AGEATNRFVYIRSWIGTYGYMYRDIQ 267
>gi|319789982|ref|YP_004151615.1| protein of unknown function DUF214 [Thermovibrio ammonificans HB-1]
gi|317114484|gb|ADU96974.1| protein of unknown function DUF214 [Thermovibrio ammonificans HB-1]
Length = 408
Score = 107 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 78/268 (29%), Positives = 136/268 (50%), Gaps = 4/268 (1%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ + +A R L K + S A I+ +GV++GV ALI+V SVM GF++ + KR+L
Sbjct: 1 MNPLLLWLAVRSL--KPKGGYHSFAVLIAVLGVVVGVAALIIVNSVMTGFQDAIKKRLLS 58
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV-LVRGIS 122
N +++ ++ P V Y + + + I V+ V PF+ A + + + +RG
Sbjct: 59 ANADIIVMKRSGPFVRYDYAQHVISKIKGVVGVEPFIYVPAMATAGQAQTAASASIRGCV 118
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDR-GKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ + + F+ KGV+IG+ LA LGI++GD+I +SPYG TP G
Sbjct: 119 PALEPKVTSIPRHMVVGDWKLFESSPKGVVIGRILADTLGITVGDEITFISPYGRKTPFG 178
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ R+ +TV+G+F + +D+ +V L + F ++V+G+ V V+D + ++
Sbjct: 179 VIPRTAKFTVVGIFEVGMYQFDSSLVLAHLDAVRKAFGFGDSVTGLMVKVRDLNLVKPVE 238
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
I +LG V DW + FS +
Sbjct: 239 RQIEAVLGPAYSVQDWISLNKSLFSALK 266
>gi|329297174|ref|ZP_08254510.1| outer membrane-specific lipoprotein transporter subunit LolE
[Plautia stali symbiont]
Length = 414
Score = 107 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 50/256 (19%), Positives = 99/256 (38%), Gaps = 1/256 (0%)
Query: 14 RYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQK 73
R+ R+ +S+ S IS IG+ +GV LI+ +S MNGF ++ R+L + H I+
Sbjct: 12 RFSRGRRRGGMVSLISIISTIGIALGVAVLIIGLSAMNGFERELNNRILAVVPHGEIEAV 71
Query: 74 YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSF 133
P ++Q + ++ +P + P+V+ + + + V+G+ L
Sbjct: 72 NQPFRNWQPMIAPIEQVPGIAAAAPYVNFTGLIESG-AKLQALQVKGVDPQQEPRLSALP 130
Query: 134 SRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLG 193
G+ + F K II + + + + +
Sbjct: 131 RFVSGDAWSQFSAVKQQIILGGGIAKSLNVKQGDWITIMIPNNDGENKLLQPKRIRLQVS 190
Query: 194 MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVV 253
D+ + + L +AQ Y +L ++VSGI + + DP +K + + V
Sbjct: 191 GILQLSGMLDHSLALVPLADAQKYLDLGDSVSGIALKMSDPFQAQKLVRDAGEATHSYVN 250
Query: 254 VIDWQQRYQIFFSCYE 269
+ W Y + +
Sbjct: 251 IRSWIGTYGYMYRDIQ 266
>gi|288549509|ref|ZP_05967278.2| lipoprotein releasing system, transmembrane protein LolE
[Enterobacter cancerogenus ATCC 35316]
gi|288318225|gb|EFC57163.1| lipoprotein releasing system, transmembrane protein LolE
[Enterobacter cancerogenus ATCC 35316]
Length = 393
Score = 107 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 53/246 (21%), Positives = 102/246 (41%), Gaps = 1/246 (0%)
Query: 24 FISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFI 83
+S+ S IS +G+ +GV LIV +S MNGF ++ R+L + H I+ P ++
Sbjct: 1 MVSLISVISTVGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEPVNQPWNNWSEA 60
Query: 84 ANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSND 143
R++ +P V P+++ V + + + + G S+
Sbjct: 61 LARMEKVPGVAAAAPYINFTGLVESGVNLRAIQVKGVNPAQEARLSALPNYVQNGAWSSF 120
Query: 144 FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYD 203
+ +IIGK +A L + GD I+I+ P + V G+ + D
Sbjct: 121 RAGEQQIIIGKGVADALKVKQGDWISIMIPNASADHKLQQPKRIRLHVTGILQ-LSGQLD 179
Query: 204 NGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQI 263
+ + + +A+ Y ++ ++V+GI + V D K + + N V + W Y
Sbjct: 180 HSFAMVPMDDARQYLDMGDSVTGIAIKVNDVFNANKLVRDAGEVTNNYVYIKSWIGTYGY 239
Query: 264 FFSCYE 269
+ +
Sbjct: 240 MYRDIQ 245
>gi|156934396|ref|YP_001438312.1| outer membrane-specific lipoprotein transporter subunit LolE
[Cronobacter sakazakii ATCC BAA-894]
gi|156532650|gb|ABU77476.1| hypothetical protein ESA_02227 [Cronobacter sakazakii ATCC BAA-894]
Length = 393
Score = 107 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 50/246 (20%), Positives = 93/246 (37%), Gaps = 1/246 (0%)
Query: 24 FISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFI 83
+S+ S IS IG+ +GV LIV +S MNGF ++ R+L + H I+ P +Q +
Sbjct: 1 MVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEPVEQPWRGWQDV 60
Query: 84 ANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSND 143
R++ + ++ P+V+ V + + V+G+ + L N
Sbjct: 61 VTRVEKVNGIVAAAPYVNFTGLVESG-ANLRAIQVKGVDPAQEQRLSALPHYVQNNAWQS 119
Query: 144 FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYD 203
F GK II + + + + + D
Sbjct: 120 FQAGKQQIIIGKGVADALKVKQGDWLSIMIPNSDADHKLLQPKRVRLQVAGILQLSGQLD 179
Query: 204 NGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQI 263
+ + L +AQ Y NL ++V+GI + V D + + ++ V + W Y
Sbjct: 180 HSFAMVPLADAQGYLNLGDSVTGIAIKVNDVFNANQLVRDAGQVTDAYVYIKSWINTYGY 239
Query: 264 FFSCYE 269
+ +
Sbjct: 240 MYRDIQ 245
>gi|302346039|ref|YP_003814392.1| efflux ABC transporter, permease protein [Prevotella melaninogenica
ATCC 25845]
gi|302149024|gb|ADK95286.1| efflux ABC transporter, permease protein [Prevotella melaninogenica
ATCC 25845]
Length = 410
Score = 107 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 56/272 (20%), Positives = 107/272 (39%), Gaps = 8/272 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RYLFS + I++ S IS +GV + MAL+VV+S NGF + +
Sbjct: 1 MNFPFYIARRYLFSKKSTHAINVISLISVLGVSVATMALVVVLSGFNGFSDLVASFFTNF 60
Query: 65 NGHVVIQQKYYPLVDYQFI-ANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ + I+ + ++ +P V V QA + N
Sbjct: 61 DPQIKIEAAKGKAMSANDPLLLKVKKLPSVEVATECVEDQALAIYHDKQAMVNVKGVEDN 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD------- 176
D ++ G+ + ++G LA++LG + +
Sbjct: 121 FDSLTHISNILYGEGDFRLHTANLQYGVLGIRLAQDLGTGVAWPDYLHIYAPQREGQYDA 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
P ++ + +F+++ YD G + SL A+ FN + ++ +E+ +K
Sbjct: 181 SDPTNAFVKDSLISPGVLFQVKQMKYDKGYIITSLDFARRIFNRQGEMTSLELRMKPGVD 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
I+K + I +LG+ V+D ++ F+
Sbjct: 241 IDKAKDEIQTLLGDKYKVLDRYEQQADTFNIM 272
>gi|148826070|ref|YP_001290823.1| outer membrane-specific lipoprotein transporter subunit LolE
[Haemophilus influenzae PittEE]
gi|148716230|gb|ABQ98440.1| hypothetical protein CGSHiEE_05320 [Haemophilus influenzae PittEE]
Length = 416
Score = 107 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 52/266 (19%), Positives = 111/266 (41%), Gaps = 5/266 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY +KN +++ + S IG+ +GV LIV +S MNGF ++ +R+L + H
Sbjct: 4 PFFISWRYQRGKQKNPLVALIAKFSAIGIALGVAVLIVGLSAMNGFERELNQRILAVVPH 63
Query: 68 VV----IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ +Q + RL P + + PFVS A V S V V+G+
Sbjct: 64 AEILSAPNATDPTIHHWQNLEKRLQQNPQIKGISPFVSFTALVENG-SKLKVVQVKGVEK 122
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + N F++ G+++G +A+ + +GD I +L +
Sbjct: 123 QAEDKVSSIGNFVQEQGWNKFEKEGGLVLGAGIAKEFDVKVGDWITLLISQQNGDEQFAQ 182
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ V + R+ + + Q + ++G+E+ + DP ++ +
Sbjct: 183 PTREPVQVTAILRLDGQLDYSYALLPLAQAQTFLTYQPDQITGVELKLDDPFSVRNLDLS 242
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
++ + + +W ++ + +
Sbjct: 243 MLNDYPQMLYMQNWISKFGYMYRDIQ 268
>gi|327481333|gb|AEA84643.1| lipoprotein releasing system, permease protein [Pseudomonas
stutzeri DSM 4166]
Length = 385
Score = 107 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 60/237 (25%), Positives = 107/237 (45%), Gaps = 2/237 (0%)
Query: 33 FIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPD 92
IG+ +GV+ +IVV+SVMNGF +M RVLG+ H I+ P+ D+Q + RL+
Sbjct: 1 MIGLALGVLVMIVVLSVMNGFDHEMRTRVLGMVPHATIES-PTPINDWQALGARLEQHAQ 59
Query: 93 VIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVII 152
V+ PF+ Q ++ ++ ++ G++ + G++I
Sbjct: 60 VLASAPFIQSQGLLTHQGQVTKILINAVEPQAERQVSIIDQFFREGSLDDLKPGEFGIVI 119
Query: 153 GKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQ 212
G A LG+++GDKI ++P VTP GM R K +TV G+F + + D + ++
Sbjct: 120 GDKAAAKLGVAVGDKITFVAPEVTVTPAGMFPRMKRFTVTGIFHVGAGEIDGYVALANIA 179
Query: 213 EAQLY-FNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + V G+ + D + + LG+ DW + + +
Sbjct: 180 DMARLQRWQPDQVQGLRLRFADLFQAPRIAWELAGQLGDDFYSRDWTRTHGNLYQAI 236
>gi|91200648|emb|CAJ73698.1| similar to lipoprotein releasing system transmembrane protein LolC
[Candidatus Kuenenia stuttgartiensis]
Length = 420
Score = 107 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 54/277 (19%), Positives = 92/277 (33%), Gaps = 22/277 (7%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
++ + RYL S + SF + GV +GVM LIVV+SVMNGF +++ R+ G
Sbjct: 2 YKFFITLRYLRSRK-------ISFFAVAGVAVGVMTLIVVLSVMNGFDQELRSRIRGTLT 54
Query: 67 HVV-----IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
H++ + + + V + G+
Sbjct: 55 HIIITKGGMYGLENYTQVMEKVKATEHVSSCAPFVEGPALIKIRGRKEFVYFKGINPVEE 114
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ S R L +S GD +
Sbjct: 115 ATVGDFKAFLSPFRKEPEDLQKTHGENQTASAFCGIELLRVSPGDPETDPISFVQEGEQI 174
Query: 182 MGIRSKSYTVLG--------MFRMRFPDYDNGMVYMSLQEAQLYFNLE--NAVSGIEVFV 231
+ + K++ + F+ DYD VY+ L AQ ++ +AVSGI V +
Sbjct: 175 VLVTLKNWDKISVKAFVIEGTFKSGMYDYDKNYVYIPLAAAQELTGIKERDAVSGISVKL 234
Query: 232 KDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
D + + + LG V W+ + F +
Sbjct: 235 HDYRYANEVRDKLQSSLGFEYYVQTWEDARRTFLTAV 271
>gi|229847136|ref|ZP_04467241.1| outer membrane-specific lipoprotein transporter subunit LolE
[Haemophilus influenzae 7P49H1]
gi|229809965|gb|EEP45686.1| outer membrane-specific lipoprotein transporter subunit LolE
[Haemophilus influenzae 7P49H1]
Length = 416
Score = 107 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 52/266 (19%), Positives = 111/266 (41%), Gaps = 5/266 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY +KN +++ + S IG+ +GV LIV +S MNGF ++ +R+L + H
Sbjct: 4 PFFISWRYQRGKQKNPLVALIAKFSAIGIALGVAVLIVGLSAMNGFERELNQRILAVVPH 63
Query: 68 VV----IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ +Q + RL P + + PFVS A V S V V+G+
Sbjct: 64 AEILSAPNATDPTIHHWQNLEKRLQQNPQIKGISPFVSFTALVENG-SKLKVVQVKGVEK 122
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + N F++ G+++G +A+ + +GD I +L +
Sbjct: 123 QAEDKVSSIGNFVQEQGWNKFEKEGGLVLGAGIAKEFDVKVGDWITLLISQQNGDEQFAQ 182
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ V + R+ + + Q + ++G+E+ + DP ++ +
Sbjct: 183 PTREPVQVTAILRLDGQLDYSYALLPLAQAQTFLTYQPDQITGVELKLDDPFSVRNLDLS 242
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
++ + + +W ++ + +
Sbjct: 243 MLNDYPQMLYMQNWISKFGYMYRDIQ 268
>gi|288800320|ref|ZP_06405778.1| membrane protein [Prevotella sp. oral taxon 299 str. F0039]
gi|288332533|gb|EFC71013.1| membrane protein [Prevotella sp. oral taxon 299 str. F0039]
Length = 409
Score = 107 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 58/275 (21%), Positives = 99/275 (36%), Gaps = 12/275 (4%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+A RYLFS + A I++ S IS +GV I MAL+V++SV NGF + + L
Sbjct: 1 MNLPFFIARRYLFSKKSTAVINVISAISVVGVAIATMALVVILSVFNGFHDLVAS--LFT 58
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI-SN 123
N IQ A ++ I + +V ++ ++VR
Sbjct: 59 NFDPQIQVVPAVGKTISADAISINKIKKMPQVAVATECVEDMALAVYRDKQLMVRVKGVQ 118
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+F L N YG + + G + + G + G
Sbjct: 119 DNFPELTNIQKILYGEGNFETHAGILQYGIFGVRAAQTLGFGTRWEGFLRIYAPIKEGQV 178
Query: 184 IRSKSYT---------VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
S T +F YD V S+ A+ F + +S +E+ +K
Sbjct: 179 DPSNPTTAFVVDSLLSPDVIFIANQQKYDKDHVVTSIDFARNLFGEQGMISSLEIKLKPG 238
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
I+ + + I G + V+D ++ + F +
Sbjct: 239 ADIDAVKKEMQNIGGKELKVLDRFEQQEDTFKIMQ 273
>gi|160884141|ref|ZP_02065144.1| hypothetical protein BACOVA_02118 [Bacteroides ovatus ATCC 8483]
gi|156110483|gb|EDO12228.1| hypothetical protein BACOVA_02118 [Bacteroides ovatus ATCC 8483]
Length = 408
Score = 107 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 54/273 (19%), Positives = 100/273 (36%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RYLFS +K+ I+I S IS GV + +AL+ +SV NGF++ +
Sbjct: 1 MNFPFYIARRYLFSKKKHNAINIISGISVCGVALATLALVCTLSVFNGFQDMVASFFTAF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + I + + D Q R ++V + + + V+++G+ ++
Sbjct: 61 DPQLKITVREGKVFDAQDKRIRAVCALPEVEVFTETLEENAMVQYKDRQAMVVLKGVEDN 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKG---VIIGKDLARNLGISIGDKINILSPYGD----- 176
+ D + + G+ D + + P +
Sbjct: 121 FEELTAIDSILYGAGEFVLHDSIVNYGVMGVELVATLGTGLEFVDPLQVYLPKRNAKVNM 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
P R Y+ +F + +YD + SL + + VS +E+ +K
Sbjct: 181 ANPGASFNRDYLYSPGVVFVVNQQEYDGKYILTSLDFLRQLLDYTTEVSAMELKLKPNVN 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
I ILG+ VV + Q+ F E
Sbjct: 241 TSSVQSKIENILGDDFVVQNRYQQQADVFRIME 273
>gi|68249937|ref|YP_249049.1| outer membrane-specific lipoprotein transporter subunit LolE
[Haemophilus influenzae 86-028NP]
gi|68058136|gb|AAX88389.1| ABC-type transport system, involved in lipoprotein release,
permease component [Haemophilus influenzae 86-028NP]
Length = 416
Score = 107 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 55/266 (20%), Positives = 114/266 (42%), Gaps = 5/266 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY +KN +++ + S IG+ +GV LIV +S MNGF ++ +R+L + H
Sbjct: 4 PFFISWRYQRGKQKNPLVALIAKFSAIGIALGVAVLIVGLSAMNGFERELNQRILAVVPH 63
Query: 68 VV----IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ Q K + +Q + RL P + + PFVS A V S V V+G+
Sbjct: 64 IEIFSAHQAKDPTIHHWQNLEKRLQQNPQIKGISPFVSFTALVENG-SKLKVVQVKGVEK 122
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + N F++ G+++G +A+ L + +GD I +L +
Sbjct: 123 QAEDKVSSIGNFVQEQGWNKFEKEGGLVLGAGIAKELDVKVGDWITLLISQQNGDEQFAQ 182
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ V + R+ + + Q + ++G+E+ + DP + +
Sbjct: 183 PTREPVQVTAILRLDGQLDYSYALLPLAQAQTFLTYQPDQITGVELKLDDPFSARNLDLS 242
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
++ + + +W ++ + +
Sbjct: 243 MLNDYPQMLYMQNWISKFGYMYRDIQ 268
>gi|145639090|ref|ZP_01794698.1| ABC-type transport system, involved in lipoprotein release,
permease component [Haemophilus influenzae PittII]
gi|145272062|gb|EDK11971.1| ABC-type transport system, involved in lipoprotein release,
permease component [Haemophilus influenzae PittII]
Length = 416
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 55/266 (20%), Positives = 115/266 (43%), Gaps = 5/266 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY +KN +++ + S IG+ +GV LIV +S MNGF ++ +R+L + H
Sbjct: 4 PFFISWRYQRGKQKNPLVALIAKFSAIGIALGVAVLIVGLSAMNGFERELNQRILAVVPH 63
Query: 68 VV----IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ Q K + +Q + RL P + + PFVS A V S V V+G+
Sbjct: 64 IEIFSAHQAKDPTIHHWQNLEKRLQQNPQIKGISPFVSFTALVENG-SKLKVVQVKGVEK 122
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + N F++ G+++G +A+ L + +GD I +L +
Sbjct: 123 QAEDKVSSIGNFVQEQGWNKFEKEGGLVLGAGIAKELDVKVGDWITLLISQQNGDEQFAQ 182
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ V + R+ + + Q + ++G+E+ + DP ++ +
Sbjct: 183 PTREPVQVTAILRLDGQLDYSYALLPLAQAQTFLTYQPDQITGVELKLDDPFSVRNLDLS 242
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
++ + + +W ++ + +
Sbjct: 243 MLNDYPQMLYMQNWISKFGYMYRDIQ 268
>gi|171910221|ref|ZP_02925691.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Verrucomicrobium spinosum DSM 4136]
Length = 475
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 48/302 (15%), Positives = 101/302 (33%), Gaps = 38/302 (12%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F + +A RYL R F+S+ + IS +GV +GV LIVV++VM GF M + +G
Sbjct: 30 KNFSLYLALRYLRPKR--TFVSVITLISILGVTLGVSVLIVVIAVMAGFHAQMKELAVGY 87
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H+ + + + + +V+ + V S G+L+ +
Sbjct: 88 EAHIEARDAWGTSMFGENHRPPDAADKPWREVIKDLRNTPGVVSASPMVRGLLLIEAEGN 147
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGK-----------GVIIGKDLARNLGISIGDKINILSP 173
+ GN + + +++ +AR G+ +GD + + +P
Sbjct: 148 MAPAWMWGIQQEDGNRLAEKQKEMVESGELDLSGDNIVLDGGVARAFGLKVGDTVTVYAP 207
Query: 174 YGDVTPMGMGIRSKSYTVLGMFRMRFPDYD-----------------------NGMVYMS 210
+ + + +
Sbjct: 208 SNLNGIVQTIREIDDKPEAEKQAAFKQLKELVLPLDLKVTGIINPPQFQDSDKMAIGVVP 267
Query: 211 LQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI--VRILGNGVVVIDWQQRYQIFFSCY 268
L AQ +++ +S I + +++P E + ++L W + + F
Sbjct: 268 LHVAQELRGIDDGISSIGIELQEPYMAGPIKEQLLKDKVLPESWEAFTWMEAHARLFGAV 327
Query: 269 ES 270
++
Sbjct: 328 QN 329
>gi|301170285|emb|CBW29891.1| outer membrane-specific lipoprotein transporter subunit
[Haemophilus influenzae 10810]
Length = 416
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 56/266 (21%), Positives = 116/266 (43%), Gaps = 5/266 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY +KN +++ + S IG+ +GV LIV +S MNGF ++ +R+L + H
Sbjct: 4 PFFISWRYQRGKQKNPLVALIAKFSAIGIALGVAVLIVGLSAMNGFERELNQRILAVVPH 63
Query: 68 V----VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ V Q K + +Q + RL P + + PFVS A V S V V+G+
Sbjct: 64 IEIFSVHQAKDPTIHHWQNLEKRLQQNPQIKGISPFVSFTALVENG-SKLKVVQVKGVEK 122
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + N F++ G+++G +A+ L + +GD I +L +
Sbjct: 123 QAEDKVSSIGNFVQEQGWNKFEKEGGLVLGAGIAKELDVKVGDWITLLISQQNGDEQFAQ 182
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ V + R+ + + Q + ++G+E+ + DP ++ +
Sbjct: 183 PTREPVQVTAILRLDGQLDYSYALLPLAQAQTFLTYQPDQITGVELKLDDPFSVRNLDLS 242
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
++ + + +W ++ + +
Sbjct: 243 MLNDYPQMLYMQNWISKFGYMYRDIQ 268
>gi|119472996|ref|ZP_01614831.1| putative lipoprotein releasing system transmembrane protein
[Alteromonadales bacterium TW-7]
gi|119444616|gb|EAW25927.1| putative lipoprotein releasing system transmembrane protein
[Alteromonadales bacterium TW-7]
Length = 414
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 54/268 (20%), Positives = 112/268 (41%), Gaps = 7/268 (2%)
Query: 7 FEVIVAWRY--LFSNR--KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ R+ ++ KN F+S + S IG+++GV LIV +SV+NGF + ++ R+L
Sbjct: 3 LSAFLSKRFRAYSGHKDEKNGFVSFIAKASTIGILLGVAVLIVALSVINGFEQQLVHRLL 62
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ V P+ ++Q ++ P V PF++ S V +RG+S
Sbjct: 63 SVVPQVEYVAPSRPIANWQLKVANIENQPHVTGAAPFIAVNGMAQ-YKSQLKAVEIRGVS 121
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S + + ++F + V++G+ + + L +GD I +L P +
Sbjct: 122 PSYEGNVS-AVNQFVTGKLVSQLSSEEVVLGQQIVKQLDAKVGDNITLLIPQVGQAGGQL 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN-AVSGIEVFVKDPDAIEKTH 241
+ L D+ ++ L +AQ + V+G+ + V D + +
Sbjct: 181 LAPKRVTLSLAGVIEMGGPIDSTAAFIHLSKAQQTLGYDETQVTGLRLSVDDVFSAHQIA 240
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
N+ + + + V + W + + +
Sbjct: 241 LNVGQTISDYVYISSWFRTQGSLYQDIQ 268
>gi|322833629|ref|YP_004213656.1| lipoprotein releasing system, transmembrane protein LolE [Rahnella
sp. Y9602]
gi|321168830|gb|ADW74529.1| lipoprotein releasing system, transmembrane protein LolE [Rahnella
sp. Y9602]
Length = 416
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 50/264 (18%), Positives = 109/264 (41%), Gaps = 1/264 (0%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
F +++ R+ R++ +S+ S IS +G+ +GV LIV +S MNGF ++ +RVL +
Sbjct: 5 PFSLLIGLRFSRGRRRSGMVSLISVISTLGIALGVAVLIVGLSAMNGFERELKERVLAVV 64
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
H I+ P ++Q + +R+ +P ++ P++ + + + ++G+
Sbjct: 65 PHGEIRPVNQPFNNWQGVLDRVGKVPGIVAAAPYIQFNGLIEHG-AKLRAIQLKGVDPQS 123
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ + N DF G+ +I + + M +
Sbjct: 124 EPRVSAAPKFVQNNAWQDFKAGQQQLILGKGVADAVGVKQGDWVTVMIPNSDPEMKLLQP 183
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ + D+ + + L +AQ Y ++ ++V+GI++ V D A +K +
Sbjct: 184 KRIRLQVAGILQLSGQLDHSLGMVPLADAQQYQDMGSSVTGIDIKVNDVFAAQKLVHDAG 243
Query: 246 RILGNGVVVIDWQQRYQIFFSCYE 269
+ V + W Y + +
Sbjct: 244 EVTQAYVYISSWIGTYGYMYRDIQ 267
>gi|119472998|ref|ZP_01614833.1| transport protein of outer membrane lipoproteins (ABC superfamily,
membrane) [Alteromonadales bacterium TW-7]
gi|119444618|gb|EAW25929.1| transport protein of outer membrane lipoproteins (ABC superfamily,
membrane) [Alteromonadales bacterium TW-7]
Length = 405
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 60/267 (22%), Positives = 116/267 (43%), Gaps = 3/267 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY S++ NAFIS SF S G+ IG+MAL V SVMNGF + +L
Sbjct: 1 MFQPVSLFIGLRYSRSSKGNAFISFISFFSIAGIAIGLMALFTVSSVMNGFEHSLKTNML 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H+ ++ + + L V V + G+A + + GVL++G+
Sbjct: 61 GLIPHIEVKSDQHTPEQITSLKADLTKSSYVKHVNLYRQGEAILQ-TNKDLHGVLLQGLY 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+++ + + + GN + + I + L+R LG+ +GDK+ ++ P
Sbjct: 120 DNNGALYKVTEKIVQGNWQTVLNSNYNIAISRYLSRKLGVGLGDKLRVIMPNASTYTPLG 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVS-GIEVFVKDPDAIEKTH 241
+ S+ + + D + + S Q L V+ + V + +P +++
Sbjct: 180 RVPSQRLFKVAAIYETGSEIDMALAFTSGPSLQRVLKLNKNVAPNLSVSLFEPFELDEFT 239
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ +++ G DW+ F+
Sbjct: 240 DA-SQLILQGYNYSDWRSSQGTLFAAV 265
>gi|148826796|ref|YP_001291549.1| outer membrane-specific lipoprotein transporter subunit LolE
[Haemophilus influenzae PittGG]
gi|148718038|gb|ABQ99165.1| outer membrane-specific lipoprotein transporter subunit LolE
[Haemophilus influenzae PittGG]
Length = 416
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 55/266 (20%), Positives = 115/266 (43%), Gaps = 5/266 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY +KN +++ + S IG+ +GV LIV +S MNGF ++ +R+L + H
Sbjct: 4 PFFISWRYQRGKQKNPLVALIAKFSAIGIALGVAVLIVGLSAMNGFERELNQRILAVVPH 63
Query: 68 VV----IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ Q K + +Q + RL P + + PFVS A V S V V+G+
Sbjct: 64 IEIFSAHQAKDPTIHHWQNLEKRLQQNPQIKGISPFVSFTALVENG-SKLKVVQVKGVEK 122
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + N F++ G+++G +A+ L + +GD I +L +
Sbjct: 123 QAEDKVSSIGNFVQEQGWNKFEKEGGLVLGAGIAKELDVKVGDWITLLISQQNGDEQFAQ 182
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ V + R+ + + Q + ++G+E+ + DP ++ +
Sbjct: 183 PTREPVQVTAILRLDGQLDYSYALLPLAQAQTFLTYQPDQITGVELKLDDPFSVRNLDLS 242
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
++ + + +W ++ + +
Sbjct: 243 MLNDYPQMLYMQNWISKFGYMYRDIQ 268
>gi|145629721|ref|ZP_01785517.1| ABC-type transport system, involved in lipoprotein release,
permease component [Haemophilus influenzae 22.1-21]
gi|144978058|gb|EDJ87837.1| ABC-type transport system, involved in lipoprotein release,
permease component [Haemophilus influenzae 22.1-21]
Length = 416
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 55/266 (20%), Positives = 116/266 (43%), Gaps = 5/266 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY +KN +++ + S IG+ +GV LIV +S MNGF ++ +R+L + H
Sbjct: 4 PFFISWRYQRGKQKNPLVALIAKFSAIGIALGVAVLIVGLSAMNGFERELNQRILAVVPH 63
Query: 68 VV----IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ Q K + +Q + RL P + + PFVS A V S V V+G+
Sbjct: 64 IEIFSAPQAKDPTIHHWQNLEKRLQQNPQIKGISPFVSFTALVENG-SKLKVVQVKGVEK 122
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + N F++ G+++G +A+ L + +GD I +L +
Sbjct: 123 QAEDKVSSIGNFVQEQGWNKFEKEGGLVLGSGIAKELDVKVGDWITLLISQQNGDEQFTQ 182
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ V + R+ + + Q + ++G+E+ + DP ++ + +
Sbjct: 183 PTREPVQVTAILRLDGQLDYSYALLPLAQAQTFLTYQPDQITGVELKLDDPFSVRNLNLS 242
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
++ + + +W ++ + +
Sbjct: 243 MLNDYPQMLYMQNWISKFGYMYRDIQ 268
>gi|294647945|ref|ZP_06725497.1| efflux ABC transporter, permease protein [Bacteroides ovatus SD CC
2a]
gi|294806343|ref|ZP_06765190.1| efflux ABC transporter, permease protein [Bacteroides xylanisolvens
SD CC 1b]
gi|292636853|gb|EFF55319.1| efflux ABC transporter, permease protein [Bacteroides ovatus SD CC
2a]
gi|294446599|gb|EFG15219.1| efflux ABC transporter, permease protein [Bacteroides xylanisolvens
SD CC 1b]
Length = 408
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 54/273 (19%), Positives = 100/273 (36%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RYLFS +K+ I+I S IS GV + +AL+ +SV NGF++ +
Sbjct: 1 MNFPFYIARRYLFSKKKHNAINIISGISVCGVALATLALVCTLSVFNGFQDMVASFFTAF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + I + + D Q R ++V + + + V+++G+ ++
Sbjct: 61 DPQLKITVREGKVFDAQDERIRTVCALPEVEVFTETLEENAMVQYKDRQAMVVLKGVEDN 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKG---VIIGKDLARNLGISIGDKINILSPYGDV---- 177
+ D + + G+ D + + P +
Sbjct: 121 FEELTAIDSILYGAGEFVLHDSIVNYGVMGVELVATLGTGLEFVDPLQVYLPKRNSKVNM 180
Query: 178 -TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
P R Y+ +F + +YD + SL + + VS +E+ +K
Sbjct: 181 ANPGASFNRDYLYSPGVVFVVNQQEYDGKYILTSLGFLRQLLDYTTEVSAMELKLKPNVN 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
I ILG+ VV + Q+ F E
Sbjct: 241 TSSVQSKIENILGDDFVVQNRYQQQADVFRIME 273
>gi|325268520|ref|ZP_08135150.1| hypothetical protein HMPREF9141_0359 [Prevotella multiformis DSM
16608]
gi|324989048|gb|EGC21001.1| hypothetical protein HMPREF9141_0359 [Prevotella multiformis DSM
16608]
Length = 410
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 51/272 (18%), Positives = 103/272 (37%), Gaps = 8/272 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RYLFS + I++ S IS +GV + MAL+VV+S NGF + +
Sbjct: 1 MNFPFYIARRYLFSKKSTHAINVISLISVLGVSVATMALVVVLSGFNGFSDLVASFFTNF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + I+ + R ++V ++ + V V+G+ ++
Sbjct: 61 DPQLKIEAAKGKAMPADDALLRKVRHLPTVEVATECVEDQALAVYHDKQAMVTVKGVEDN 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNL---GISIGDKINILSPYGDVTPMG 181
S S + + G++ D + I +P +
Sbjct: 121 FDSLTHISNILYGDGDFTLHAANLQYGVPGIRLAQDLGTGVAWQDYLQIYAPQREGQYDA 180
Query: 182 MGIRSKSYT-----VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
+ +F+++ YD G + S+ A+ FN + ++ +E+ ++
Sbjct: 181 SDPTNAFVKDSLVSPGVLFQVKQTKYDKGYLLTSIDFARRIFNRQGEITSLELRMRPGVD 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
I++ + I ILG V+D ++ F+
Sbjct: 241 IDREKQEIQDILGRKYRVLDRYEQQADTFNIM 272
>gi|145634885|ref|ZP_01790592.1| outer membrane-specific lipoprotein transporter subunit LolE
[Haemophilus influenzae PittAA]
gi|145267751|gb|EDK07748.1| outer membrane-specific lipoprotein transporter subunit LolE
[Haemophilus influenzae PittAA]
Length = 416
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 55/266 (20%), Positives = 114/266 (42%), Gaps = 5/266 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY +KN +++ + S IG+ +GV LIV +S MNGF ++ +R+L + H
Sbjct: 4 PFFISWRYQRGKQKNPLVALIAKFSAIGIALGVAVLIVGLSAMNGFERELNQRILAVVPH 63
Query: 68 VV----IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ Q K + +Q + RL P + + PFVS A V S V V+G+
Sbjct: 64 IEIFSAPQVKDPTIHHWQNLEKRLQQNPQIKGISPFVSFTALVENG-SKLKVVQVKGVEK 122
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + N F++ G+++G +AR L + GD + +L +
Sbjct: 123 QAEDKVSSIGNFVQEQGWNKFEKEGGLVLGSGIARELNVKAGDWVTLLISQQNGDEQFAQ 182
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ V + R+ + + Q + ++G+E+ + DP ++ +
Sbjct: 183 PTREPVQVTAILRLDGQLDYSYALLPLAQAQTFLTYQPDQITGVELKLDDPFSVRNLDLS 242
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
++ + + +W ++ + +
Sbjct: 243 MLNDYPQMLYMQNWISKFGYMYRDIQ 268
>gi|145642057|ref|ZP_01797628.1| outer membrane-specific lipoprotein transporter subunit LolE
[Haemophilus influenzae R3021]
gi|145273237|gb|EDK13112.1| outer membrane-specific lipoprotein transporter subunit LolE
[Haemophilus influenzae 22.4-21]
Length = 416
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 54/266 (20%), Positives = 114/266 (42%), Gaps = 5/266 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY +KN +++ + S IG+ +GV LIV +S MNGF ++ +R+L + H
Sbjct: 4 PFFISWRYQRGKQKNPLVALIAKFSAIGIALGVAVLIVGLSAMNGFERELNQRILAVVPH 63
Query: 68 VV----IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ Q K + +Q + RL P + + PFVS A V S V V+G+
Sbjct: 64 IEIFSAPQAKDPTIHHWQNLEKRLQQNPQIKGISPFVSFTALVENG-SKLKVVQVKGVEK 122
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + + F + G+++G +A+ L + +GD I +L +
Sbjct: 123 QAEDKVSSIGNFVQEQGWDKFGKEGGLVLGAGIAKELDVKVGDWITLLISQQNGDEQFAQ 182
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ V + R+ + + Q + ++G+E+ + DP ++ +
Sbjct: 183 PTREPVQVTAILRLDGQLDYSYALLPLAQAQTFLTYQPDQITGVELKLDDPFSVRNLDLS 242
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
++ + + +W ++ + +
Sbjct: 243 MLNDYPQMLYMQNWISKFGYMYRDIQ 268
>gi|308186437|ref|YP_003930568.1| Lipoprotein releasing system transmembrane protein [Pantoea vagans
C9-1]
gi|308056947|gb|ADO09119.1| Lipoprotein releasing system transmembrane protein [Pantoea vagans
C9-1]
Length = 414
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 52/256 (20%), Positives = 104/256 (40%), Gaps = 1/256 (0%)
Query: 14 RYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQK 73
R+ R+ +S+ S IS IG+ +GV LI+ +S MNGF ++ R+L + H I+
Sbjct: 12 RFSRGRRRGGMVSLISVISTIGIALGVAVLIIGLSAMNGFERELNNRILAVVPHGEIEAV 71
Query: 74 YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSF 133
P +Q + ++ +P + P+V+ + + + + +
Sbjct: 72 NQPFQHWQSMIAPIEKVPGIAAAAPYVNFTGLIESGARLEALQVKGVDPAQEPRLSALPQ 131
Query: 134 SRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLG 193
S+ + +I+G +A +L + GD I I+ P D + + +
Sbjct: 132 FVAGNGWSSFAAGKQQIILGGGIAESLKVKQGDWITIMIPNNDGDNK-LLQPKRIRLQVS 190
Query: 194 MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVV 253
D+ + + L +AQ Y ++ ++VSGI + + DP K + + V
Sbjct: 191 GILQLSGMLDHSLALVPLADAQHYLDMGDSVSGIALKMTDPFQAVKLVRDAGEATRSYVY 250
Query: 254 VIDWQQRYQIFFSCYE 269
+ W Y + +
Sbjct: 251 IKSWIGTYGYMYRDIQ 266
>gi|309751041|gb|ADO81025.1| Outer membrane-specific lipoprotein ABC transporter, permease
component LolE [Haemophilus influenzae R2866]
Length = 416
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 55/266 (20%), Positives = 115/266 (43%), Gaps = 5/266 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY +KN +++ + S IG+ +GV LIV +S MNGF ++ +R+L + H
Sbjct: 4 PFFISWRYQRGKQKNPLVALIAKFSAIGIALGVAVLIVGLSAMNGFERELNQRILAVVPH 63
Query: 68 VV----IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ Q K + +Q + RL P + + PFVS A V S V V+G+
Sbjct: 64 IEIFSAHQAKDPTIHHWQNLEKRLQQNPQIKGISPFVSFTALVENG-SKLKVVQVKGVEK 122
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + N F++ G+++G +A+ L + +GD I +L +
Sbjct: 123 QAEDKVSSIGNFVQEQGWNKFEKEGGLVLGAGIAKELDVKVGDWITLLISQQNGDEQFAQ 182
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ V + R+ + + Q + ++G+E+ + DP ++ +
Sbjct: 183 PTREPVQVTAILRLDGQLDYSYALLPLAQAQTFLTYQPDQITGVELKLDDPFSVRNLDLS 242
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
++ + + +W ++ + +
Sbjct: 243 MLNDYPQMLYMQNWISKFGYMYRDIQ 268
>gi|282859949|ref|ZP_06269037.1| efflux ABC transporter, permease protein [Prevotella bivia
JCVIHMP010]
gi|282587352|gb|EFB92569.1| efflux ABC transporter, permease protein [Prevotella bivia
JCVIHMP010]
Length = 410
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 53/273 (19%), Positives = 99/273 (36%), Gaps = 10/273 (3%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RYLFS + I++ S IS IGV + MAL+VVMS NGF + +
Sbjct: 1 MNFPFYIARRYLFSKKSTHAINVISSISVIGVAVATMALVVVMSGFNGFSDLVASFFTEF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + I+ + + V ++ + V+G+ +
Sbjct: 61 DPQLKIEAVTGKAMPADDPLLVKVKQMPEVSVSTECVEDQALAIYHGKQKMITVKGMQEN 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVI---------IGKDLARNLGISIGDKINILSPYG 175
S S + + +G L + I + Y
Sbjct: 121 FDSLTHISNICYGEGDLDLEVANLQYALLGIRVAQDLGTGLLWRDYLHIYAPLR-EGQYD 179
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD 235
+ P ++ + +F+++ YD G + SL A+ FN + ++ +E+ +K
Sbjct: 180 PLDPSQSFVKDSLLSPGMVFQVKQSKYDGGYIITSLNFARRLFNRQGEITSLELRMKSGV 239
Query: 236 AIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
I+K + I +LG V + ++ F
Sbjct: 240 DIDKVQDQIKTLLGEKYTVKNRYEQQADTFKIM 272
>gi|254480438|ref|ZP_05093685.1| efflux ABC transporter, permease protein [marine gamma
proteobacterium HTCC2148]
gi|214039021|gb|EEB79681.1| efflux ABC transporter, permease protein [marine gamma
proteobacterium HTCC2148]
Length = 414
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 56/259 (21%), Positives = 112/259 (43%), Gaps = 3/259 (1%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
VA RY F++ + + S +S +G+++ + LIVV+SVMNGF +M +R+L + H+ +
Sbjct: 9 VALRYTFAHGQGHLSTFLSSLSMLGLVLAIALLIVVLSVMNGFDREMRERILSLVPHITV 68
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
P+ D+Q + + P V++V PF A + + + S
Sbjct: 69 SSHQ-PMDDWQTRRDEVLIHPQVLQVSPFTQFDALFMTGTEIETASGIGIDVTEPGSEAL 127
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
+ + R +++G +A L +GD + ++ P G +T R ++
Sbjct: 128 LAS-LPESARAVFNRRQDALVLGVGIAERLDAQVGDTLTLIVPGGGLTGDTGATRFEALH 186
Query: 191 VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN 250
+ G+ + D + + L+ A L ++VSG+ + D + K +V L
Sbjct: 187 LAGVLETG-TELDQAVALLRLETASELAGLGSSVSGLRLVSSDIFDVSKIGWQVVNNLPV 245
Query: 251 GVVVIDWQQRYQIFFSCYE 269
G +W + ++ +
Sbjct: 246 GHYTTNWMMTHGNLYAAIQ 264
>gi|58584740|ref|YP_198313.1| ABC-type transport system, involved in lipoprotein release,
permease component [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|58419056|gb|AAW71071.1| ABC-type transport system, involved in lipoprotein release,
permease component [Wolbachia endosymbiont strain TRS of
Brugia malayi]
Length = 385
Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 74/243 (30%), Positives = 118/243 (48%), Gaps = 5/243 (2%)
Query: 28 ASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRL 87
+ S IG+ +GV LIVVMSVMNGFR ++ +LGI+GH+ + DY+ + +
Sbjct: 1 MTLFSIIGIALGVATLIVVMSVMNGFRARLLDSILGIDGHINVYFDRNINSDYRTVLESV 60
Query: 88 DFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRG 147
IP V+K + Q ++ + V S L N+ + V +
Sbjct: 61 KKIPGVLKATLMTNDQVIIT---ANSRIVGAVVRGVSAKDLLNNTTIKNSVIVGDVRKFD 117
Query: 148 KGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMV 207
KGV+IG LA L + GDKI ++S G + + R K Y V+ +F M +YDN ++
Sbjct: 118 KGVVIGARLAEVLDVGYGDKIVLISSEGFDSLLSEVPRMKEYEVIAIFDMGMFEYDNTLI 177
Query: 208 YMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSC 267
YM ++ AQ +F+ ++ IEVFV D + I + G+ WQ + +F+
Sbjct: 178 YMPIKSAQAFFHYRDSARNIEVFVSDLTKANELANIIEKE--TGMEARSWQLQQSHYFNA 235
Query: 268 YES 270
E+
Sbjct: 236 LET 238
>gi|290475837|ref|YP_003468729.1| transport protein of outer membrane lipoproteins (ABC superfamily,
membrane) [Xenorhabdus bovienii SS-2004]
gi|289175162|emb|CBJ81965.1| transport protein of outer membrane lipoproteins (ABC superfamily,
membrane) [Xenorhabdus bovienii SS-2004]
Length = 387
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 55/254 (21%), Positives = 106/254 (41%), Gaps = 7/254 (2%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
+ + F S++S IG+ +GV ALI V+SVMNGF + +LG +I +
Sbjct: 1 MRGRAVDKFGRFVSWLSAIGITLGVAALITVLSVMNGFERSLESSILGFMPQAIITSEKG 60
Query: 76 PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSR 135
+ + N+L + V ++ P V + + G GV++ + +
Sbjct: 61 SINPDEHPMNQLSGLKGVNRITPIVQSDVVLQSARNVGVGVMLGITPDEYT---PLAAHV 117
Query: 136 FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMF 195
+ + VI+G+ LA LG+ GD+I ++ P I S+ +
Sbjct: 118 ADTDRTQLQPGRYFVILGEKLAIKLGVKRGDQIRVIVPSASQLTPMGRIPSQRLFTVIGT 177
Query: 196 RMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHENIVRILGNGVVV 254
+ D+ + ++ Q+A F + ++G +++ P ++ + L G+V
Sbjct: 178 FFANSEVDDTEMLVNQQDAVRLFRYPMDNITGWRLYLNQPLTVDVLS---QQTLPEGLVW 234
Query: 255 IDWQQRYQIFFSCY 268
DW++R FF
Sbjct: 235 KDWRERKGEFFQAV 248
>gi|145642046|ref|ZP_01797617.1| lipoprotein releasing system transmembrane protein [Haemophilus
influenzae R3021]
gi|145273226|gb|EDK13101.1| lipoprotein releasing system transmembrane protein [Haemophilus
influenzae 22.4-21]
Length = 261
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 107/267 (40%), Gaps = 12/267 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +A RY + + F + + ++ +G+++GVMALI+V+SVMNG ++VL
Sbjct: 1 MNFPISLYIALRYWRAKSADRFGRLVTNLASLGIVLGVMALIIVLSVMNGLEGYQKQQVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H ++ ++ L+ +P ++ ++ + + G S + GI
Sbjct: 61 SSIPHAIVSEEQPI-----STEKTLENLPHFVQKAVPINTTNVIYQTAKGVSAGQIIGIQ 115
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ L SF + N ++IG LA+ LG++IGDKI ++
Sbjct: 116 SFSDDPLVESFEQAKFNEI-LPSGEFKLVIGDQLAQKLGVNIGDKIRLMITENSQYTPFG 174
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
+ + + + + + ++ + + G +F+ DP I +
Sbjct: 175 RVPMQRLFTVSDIYYDYGEASGYEAFANITDIGRLMRIQPQQAQGYRLFLNDPFQITELP 234
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
++ + DW+ + FF
Sbjct: 235 QHFSTQ-----KITDWRVQKGEFFQAV 256
>gi|268680011|ref|YP_003304442.1| hypothetical protein Sdel_1387 [Sulfurospirillum deleyianum DSM
6946]
gi|268618042|gb|ACZ12407.1| protein of unknown function DUF214 [Sulfurospirillum deleyianum DSM
6946]
Length = 400
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 61/267 (22%), Positives = 114/267 (42%), Gaps = 9/267 (3%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + +YL ++ FI++ SF++F GV IG+M L+V M++MNGF ++ K++
Sbjct: 1 MQTNLSFYLVKKYLRFDKSQPFITVISFLAFFGVAIGLMVLMVAMAIMNGFDKEFEKKLF 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+N + + + RL +K P++S Q V + G ++ G++
Sbjct: 61 TMN-YPLSIYSRSFNLVSHADLERLKAQFPALKFSPYISTQVIVKKG-NRLEGGMLFGVN 118
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + + D +I G ++A+ S DK ++ D M +
Sbjct: 119 FDQEAQINAILAEAIAGKTLDKYD---LITGSEIAKTHHFSAEDKATLIFTKNDPGGMSL 175
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQE-AQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ K + G FR YD +Y +L AQ+ E GI ++ DP
Sbjct: 176 IPKMKRFNYQGSFRSGLMAYDKAYMYTTLDSLAQVLQYEEGFYDGIHIYSDDPF---ADI 232
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
E I +L + ++ W Q FF+
Sbjct: 233 EKIRSVLSEDLGIVGWWQMNGNFFAAL 259
>gi|77360331|ref|YP_339906.1| outer membrane lipoproteins ABC transporter membrane protein
[Pseudoalteromonas haloplanktis TAC125]
gi|76875242|emb|CAI86463.1| transport protein of outer membrane lipoproteins (ABC superfamily,
membrane) [Pseudoalteromonas haloplanktis TAC125]
Length = 410
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 65/268 (24%), Positives = 118/268 (44%), Gaps = 3/268 (1%)
Query: 2 SIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
++F + + RY S++ NAFIS SF S G+ IG+MAL V SVMNGF + +
Sbjct: 5 NMFQPVSLFIGLRYSRSSKGNAFISFISFFSIAGIAIGLMALFTVSSVMNGFESSLKTNM 64
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
LG+ HV +Q + L+ P V V + G+A + + GVL++G+
Sbjct: 65 LGLIPHVEVQANKRTAAQMSSLKADLEQSPYVSTVSLYQHGEAILQ-TNKDLHGVLLQGL 123
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
D S + + GN ++ + I + L+R LG+ +GDK+ ++ P
Sbjct: 124 YGDDGSLYKITDKIVQGNWQTVLNKNYSIAISRYLSRKLGVGLGDKLRVIMPNASTYTPL 183
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKT 240
+ S+ + + D G+ + S Q L+ N + + + +P A+++
Sbjct: 184 GRMPSQRLFKIAAIYETGSEIDMGLAFTSGASLQRVLKLDQNTAPNLSISLYEPFALDEF 243
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ +++ DW+ F+
Sbjct: 244 IQA-SKLILKDHTYTDWRSSQGTLFAAV 270
>gi|260583290|ref|ZP_05851065.1| lipoprotein releasing system, transmembrane protein LolE
[Haemophilus influenzae NT127]
gi|260093650|gb|EEW77563.1| lipoprotein releasing system, transmembrane protein LolE
[Haemophilus influenzae NT127]
Length = 416
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 54/266 (20%), Positives = 114/266 (42%), Gaps = 5/266 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY +KN +++ + S IG+ +GV LIV +S MNGF ++ +R+L + H
Sbjct: 4 PFFISWRYQRGKQKNPLVALIAKFSAIGIALGVAVLIVGLSAMNGFERELNQRILAVVPH 63
Query: 68 VV----IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ Q K + +Q + RL P + + PFVS A V S V V+G+
Sbjct: 64 IEIFSAPQAKDPTIHHWQNLEKRLQQNPQIKGISPFVSFTALVENG-SKLKVVQVKGVEK 122
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + N F++ G+++G +A+ L + +GD + +L +
Sbjct: 123 QAEDKVSSIGNFVQEQGWNKFEKEGGLVLGSGIAKELDVKVGDWVTLLISQQNGDEQFAQ 182
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ V + R+ + + Q + ++G+E+ + DP + +
Sbjct: 183 PTREPVQVTAILRLDGQLDYSYALLPLAQAQTFLTYQPDQITGVELKLDDPFSARNLDLS 242
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
++ + + +W ++ + +
Sbjct: 243 MLNDYPQMLYMQNWISKFGYMYRDIQ 268
>gi|152990578|ref|YP_001356300.1| hypothetical protein NIS_0831 [Nitratiruptor sp. SB155-2]
gi|151422439|dbj|BAF69943.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
Length = 399
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 61/267 (22%), Positives = 116/267 (43%), Gaps = 10/267 (3%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ RF V RYL +++ FI +++ ++F+G+ IGVM LIV M +MNG ++ K++
Sbjct: 1 MDKRFVNFVVRRYLRFDKEQPFIFLSALLAFLGIAIGVMVLIVAMGIMNGMDKEFEKKLF 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+N + + + + + RL + + P+++ Q ++ GV+
Sbjct: 61 TMN-YPLTILPKFSARIDKTVVERLQKKFPNLLMSPYITAQVIYKKGNNLEGGVIFGVDF 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + + + + +I+GK+L + ++ +KI ++ P + +
Sbjct: 120 DK-----ERKINDVFKHYVKQPPKKYEIIVGKELYKEFYLTPNEKIFVIFPQSEPNGFSV 174
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN-AVSGIEVFVKDPDAIEKTH 241
K + V G F YD Y +L + +++ SGI V+ P K
Sbjct: 175 TPIFKRFRVKGYFHSGLIAYDKAYSYTTLASLRKILHMKKTDFSGIHVYSSQP---RKDK 231
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
E I LG+ VI W Q FFS
Sbjct: 232 EKIEAFLGDDYSVIGWWQLNGNFFSAL 258
>gi|145637558|ref|ZP_01793215.1| outer membrane-specific lipoprotein transporter subunit LolE
[Haemophilus influenzae PittHH]
gi|145269244|gb|EDK09190.1| outer membrane-specific lipoprotein transporter subunit LolE
[Haemophilus influenzae PittHH]
Length = 416
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 55/266 (20%), Positives = 115/266 (43%), Gaps = 5/266 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY +KN +++ + S IG+ +GV LIV +S MNGF ++ +R+L + H
Sbjct: 4 PFFISWRYQRGKQKNPLVALIAKFSAIGIALGVAVLIVGLSAMNGFERELNQRILAVVPH 63
Query: 68 VV----IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ Q K + +Q + RL P + + PFVS A V S V V+G+
Sbjct: 64 IEIFSAPQAKDPTIHHWQNLEKRLQQNPQIKGISPFVSFTALVENG-SKLKVVQVKGVEK 122
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + N F++ G+++G +A+ L + +GD I +L +
Sbjct: 123 QAEDKVSSIGNFVQEQGWNKFEKEGGLVLGSGIAKELDVKVGDWITLLISQQNGDEQFAQ 182
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ V + R+ + + Q + ++G+E+ + DP ++ +
Sbjct: 183 PTREPVQVTAILRLDGQLDYSYALLPLAQAQTFLTYQPDQITGVELKLDDPFSVRNLDLS 242
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
++ + + +W ++ + +
Sbjct: 243 MLNDYPQMLYMQNWISKFGYMYRDIQ 268
>gi|319897166|ref|YP_004135361.1| outer membrane-specific lipoprotein transporter subunit
[Haemophilus influenzae F3031]
gi|317432670|emb|CBY81033.1| outer membrane-specific lipoprotein transporter subunit
[Haemophilus influenzae F3031]
Length = 416
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 54/266 (20%), Positives = 116/266 (43%), Gaps = 5/266 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY +KN +++ + S IG+ +GV LIV +S MNGF ++ +R+L + H
Sbjct: 4 PFFISWRYQRGKQKNPLVALIAKFSAIGIALGVAVLIVGLSAMNGFERELNQRILAVVPH 63
Query: 68 VV----IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ Q K + +Q + RL P + + PFVS A V S V V+G+
Sbjct: 64 IEIFSAHQAKDPTIHHWQNLEKRLQQNPQIKGISPFVSFTALVENG-SKLKVVQVKGVEK 122
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + N F++ G+++G +A+ L + +GD + +L +
Sbjct: 123 QAEDKVSSIGNFVQEQGWNKFEKEGGLVLGSGIAKELDVKVGDWVTLLISQQNGDEQFAQ 182
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ + V + R+ + + Q + ++G+E+ + DP ++ +
Sbjct: 183 LTREPVQVTAILRLDGQLDYSYALLPLAQAQTFLTYQPDQITGVELKLDDPFSVRNLDLS 242
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
++ + + +W ++ + +
Sbjct: 243 MLNDYPQMLYMQNWISKFGYMYRDIQ 268
>gi|88705093|ref|ZP_01102805.1| lipoprotein releasing system transmembrane protein LolC
[Congregibacter litoralis KT71]
gi|88700788|gb|EAQ97895.1| lipoprotein releasing system transmembrane protein LolC
[Congregibacter litoralis KT71]
Length = 419
Score = 106 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 63/272 (23%), Positives = 108/272 (39%), Gaps = 9/272 (3%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ + + RY FS +++ F ++ S S +G+M+GV +LI V+SVMNGF ++ R+L
Sbjct: 1 MASYTSFLGLRYGFSRQRSRFTALVSMASMLGMMLGVASLITVLSVMNGFAGELRGRILA 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDF-------IPDVIKVLPFVSGQAFVSGLSSGGSGV 116
+ H ++ + R I + + + G
Sbjct: 61 LIPHAYVELLPAQDSKKGEESARATEALSSDLLADPRILAIAPFVRETVLFSGPYRQQGA 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
++ GI S S L D VI+G +AR LG+ GD++ I+ P
Sbjct: 121 VLTGIDISRQSALTELEDFLRVGRLEDLREDFTVILGSSMARMLGVVPGDELRIVLPQVS 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
VTP+G+ RS+ TV+G+F + + Y+SL A G+++ D
Sbjct: 181 VTPLGLFPRSRLLTVVGLFEVGAQQDSM-LAYVSLPTANRLLKTGGT-RGLQLRTSDLMT 238
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ +L V W + F
Sbjct: 239 APTLGAALDPVLQGRGVYRPWSETQGSLFRAI 270
>gi|227357768|ref|ZP_03842117.1| lipoprotein releasing system, transmembrane protein [Proteus
mirabilis ATCC 29906]
gi|227162097|gb|EEI47111.1| lipoprotein releasing system, transmembrane protein [Proteus
mirabilis ATCC 29906]
Length = 387
Score = 106 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 59/255 (23%), Positives = 92/255 (36%), Gaps = 7/255 (2%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
+ + F S++S +G+M+GV ALI V SVMNGF + +L VI
Sbjct: 1 MRGRAVDKFGRFVSWLSALGIMLGVAALITVTSVMNGFERSLQNSILAYIPQAVITTPNG 60
Query: 76 PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSR 135
L A L V+ V L S + + + +
Sbjct: 61 QLPKQDSTAQMLL---KREDVINVVPLVEGDVVLQSKDNIGVGVMLGIDKAQDEPLTQFI 117
Query: 136 FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMF 195
YG+ S GVI+G LA+ L GD I ++ P + S+ +
Sbjct: 118 RYGDFSLLKPGEYGVILGSGLAKQLKTKEGDSIRLIVPGVSQLTPMGRVPSQRLFTVKGI 177
Query: 196 RMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVV 254
D D + ++ Q+A ++G +F P IEK L G+
Sbjct: 178 FQSGGDADASQLLVNQQDAARLMRYQPGNITGWRLFFSTPLNIEKYSAE---PLPAGLSW 234
Query: 255 IDWQQRYQIFFSCYE 269
DW++R FF +
Sbjct: 235 KDWRERKGEFFQAVK 249
>gi|332036272|gb|EGI72744.1| lipoprotein releasing system transmembrane protein LolE
[Pseudoalteromonas haloplanktis ANT/505]
Length = 414
Score = 106 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 51/268 (19%), Positives = 104/268 (38%), Gaps = 7/268 (2%)
Query: 7 FEVIVAWRY--LFSNR--KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ R+ ++ KN F+S + S IG+++GV LIV +SV+NGF + ++ R+L
Sbjct: 3 LSAFLSKRFRAYSGHKDEKNGFVSFIAKASTIGILLGVAVLIVALSVINGFEQQLVHRLL 62
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ V P+ ++ L P V PF++ S + +
Sbjct: 63 SVVPQVEYVAPSRPIANWSQKVEDLQTQPHVTGAAPFIAVNGMAQYKSQLKAIEIRGVEP 122
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ ++F VI+GK + + L +GD I +L P +
Sbjct: 123 S--LESNVSAVNQFTSGKLVSQLGLDDVILGKQIVKQLDAKVGDNITLLIPQISQKGQSL 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN-AVSGIEVFVKDPDAIEKTH 241
+ L D+ ++ L +AQ + V+G+ + V D + +
Sbjct: 181 LAPKRVTLNLAGVIEMGGPIDSTAAFIHLNKAQQTLGYDETQVTGLRLSVDDVFSAHQIA 240
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + + V V W + + +
Sbjct: 241 LKVGQTIDDYVYVSSWFRTQGSLYQDIQ 268
>gi|327312737|ref|YP_004328174.1| efflux ABC transporter permease [Prevotella denticola F0289]
gi|326946245|gb|AEA22130.1| efflux ABC transporter, permease protein [Prevotella denticola
F0289]
Length = 410
Score = 106 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 55/272 (20%), Positives = 109/272 (40%), Gaps = 8/272 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RYLFS + I++ S IS +GV + MAL+VV+S NGF + +
Sbjct: 1 MNFPFYIARRYLFSKKSTHAINVISLISVLGVSVATMALVVVLSGFNGFSDLVASFFTNF 60
Query: 65 NGHVVIQQKYYPLVDYQFI-ANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ + I+ + ++ +P V V QA + N
Sbjct: 61 DPQLKIEAAKGKAMPADDALLRKVRHLPTVEVATECVEDQALAVYHDKQAMVTVKGVEDN 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARN--LGISIGDKINILSPYGDVTPMG 181
D ++ G+ + + ++G LA++ G++ D + I +P +
Sbjct: 121 FDSLTHISNILYGDGDFTLHAANLQYGVLGIRLAQDLGTGVAWQDYLQIYAPQREGQYDA 180
Query: 182 MGIRSKSYT-----VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
+ +F+++ YD G + S+ A+ FN + ++ +E+ ++
Sbjct: 181 SDPTNAFVKDSLVSPGVLFQVKQTKYDKGYIITSIDFARRIFNRQGEITSLELRMRPGVD 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
I++ + I ILG V+D ++ F+
Sbjct: 241 IDREKQEIQDILGRKYRVLDRYEQQADTFNIM 272
>gi|15602427|ref|NP_245499.1| outer membrane-specific lipoprotein transporter subunit LolE
[Pasteurella multocida subsp. multocida str. Pm70]
gi|12720828|gb|AAK02646.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 417
Score = 106 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 57/268 (21%), Positives = 112/268 (41%), Gaps = 8/268 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY S +KN +S+ S S IG+ +GV LIV +S MNGF ++ +R+L + H
Sbjct: 4 PFFISWRYQRSKQKNRLVSLISAFSSIGIALGVAVLIVGLSAMNGFERELNQRILAVVPH 63
Query: 68 VVIQQKYYP-----LVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
V I + +Q + L + + P+V+ A V + V V+G+
Sbjct: 64 VEIMAYPNEKGTSSIKPWQPLVKTLAQHEQIDGISPYVTFTALVENG-TKLKVVQVKGVE 122
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S + F++ G+I+G +AR+L + GD +++L + +
Sbjct: 123 KSAQDQVSALGQFVLDEGWKVFEQQSGLILGYGIARDLDVVAGDWVSLLISPPNEQNQ-L 181
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ + D+ + L +AQ + + V G+E+ VK P ++
Sbjct: 182 AQPIRHRIQVSGILRLEGQLDHSYALLPLTQAQTLLGISTDEVHGVELKVKQPFQVQTLT 241
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+++ + W ++ + +
Sbjct: 242 FPMLQDYPQALYAQHWIHKFGYMYRDIQ 269
>gi|197121549|ref|YP_002133500.1| hypothetical protein AnaeK_1138 [Anaeromyxobacter sp. K]
gi|196171398|gb|ACG72371.1| protein of unknown function DUF214 [Anaeromyxobacter sp. K]
Length = 658
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 68/283 (24%), Positives = 117/283 (41%), Gaps = 30/283 (10%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
LF + + + IS GV IGV AL VV+SVM+GF D+ K++LG H ++
Sbjct: 238 LFHRPRMPATLLMTLISIGGVAIGVWALTVVLSVMSGFEADLKKKILGHTAHGMVLSYGQ 297
Query: 76 PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSR 135
++ + +G +++GI + + +
Sbjct: 298 DDFGDWRRIRETVLGVRGVEAATPFLYNEVMLSTGQNLTGAILKGIDVKTIGSVTDLPAS 357
Query: 136 FYGNVSND----------------------------FDRGKGVIIGKDLARNLGISIGDK 167
G++IG++LA L + +GD+
Sbjct: 358 VQDGRLEWLEAPAEIPLPRDGGSGDGGGAAPERPRPGRPLPGIVIGRELAHALRVFVGDQ 417
Query: 168 INILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGI 227
+N++SP+GD+ P G +S+ + V +F +YD+ Y+SL +AQ +F +E V+G+
Sbjct: 418 VNLVSPFGDLGPGGPQPKSRPFRVAAVFYSGMYEYDSKFAYISLADAQRFFGVE-TVTGL 476
Query: 228 EVFVKDPDAIEKTHENIVRILGN-GVVVIDWQQRYQIFFSCYE 269
EV V+D DA +V LG DW + + FS +
Sbjct: 477 EVKVRDADAARSVMGRVVFALGGWPYRAKDWGELNRSLFSALQ 519
>gi|145632938|ref|ZP_01788671.1| ABC-type transport system, involved in lipoprotein release,
permease component [Haemophilus influenzae 3655]
gi|229844220|ref|ZP_04464361.1| outer membrane-specific lipoprotein transporter subunit LolE
[Haemophilus influenzae 6P18H1]
gi|144986594|gb|EDJ93160.1| ABC-type transport system, involved in lipoprotein release,
permease component [Haemophilus influenzae 3655]
gi|229813214|gb|EEP48902.1| outer membrane-specific lipoprotein transporter subunit LolE
[Haemophilus influenzae 6P18H1]
Length = 416
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 54/266 (20%), Positives = 114/266 (42%), Gaps = 5/266 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY +KN +++ + S IG+ +GV LIV +S MNGF ++ +R+L + H
Sbjct: 4 PFFISWRYQRGKQKNPLVALIAKFSAIGIALGVAVLIVGLSAMNGFERELNQRILAVVPH 63
Query: 68 VV----IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ Q K + +Q + RL P + + PFVS A V S V V+G+
Sbjct: 64 IEIFSAPQAKDPTIHHWQNLEKRLQQNPQIKGISPFVSFTALVENG-SKLKVVQVKGVEK 122
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + + F + G+++G +A+ L + +GD I +L +
Sbjct: 123 QAEDKVSSIGNFVQEQGWDKFGKEGGLVLGAGIAKELDVKVGDWITLLISQQNGDEQFAQ 182
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ V + R+ + + Q + ++G+E+ + DP ++ +
Sbjct: 183 PTREPVQVTAILRLDGQLDYSYALLPLAQAQTFLTYKSDQITGVELKLDDPFSVRNLDLS 242
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
++ + + +W ++ + +
Sbjct: 243 MLNDYPQMLYMQNWISKFGYMYRDIQ 268
>gi|330433179|gb|AEC18238.1| outer membrane-specific lipoprotein transporter subunit LolE
[Gallibacterium anatis UMN179]
Length = 416
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 44/264 (16%), Positives = 92/264 (34%), Gaps = 3/264 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY + +KN +S+ S+ S +G+ +GV LI+ +S MNGF+ ++ +R+L + H
Sbjct: 4 PFFISWRYQRAKQKNRLVSLISWFSTLGIALGVAVLIIGLSAMNGFQRELDQRILAVVPH 63
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ I + + +K + ++ + V+G+
Sbjct: 64 IDISGYQKEPIQNWQKLVEALRTNNEVKGISPYVTFTTLAEAGGKLKVIQVKGVEPQLLQ 123
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN--ILSPYGDVTPMGMGIR 185
+ F + II ++S M
Sbjct: 124 QVSAVGQFVLDGHWQTFSKQNQGIILGYGIAKDLNVNVGDWVSLLVSNQNQQELNKMTQP 183
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHENI 244
+ + D+ ++ L AQ Y + VSG+E+ V P A+ + +
Sbjct: 184 QRHRLQVAGILRLDGQLDHSYAFIPLALAQQYLDYQPTQVSGVEIAVHSPFAVNEFDFSA 243
Query: 245 VRILGNGVVVIDWQQRYQIFFSCY 268
+ + W +R+ +
Sbjct: 244 LADYPQALTAHSWIERFGYMYRDI 267
>gi|325299552|ref|YP_004259469.1| hypothetical protein Bacsa_2455 [Bacteroides salanitronis DSM
18170]
gi|324319105|gb|ADY36996.1| protein of unknown function DUF214 [Bacteroides salanitronis DSM
18170]
Length = 407
Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 46/266 (17%), Positives = 86/266 (32%), Gaps = 8/266 (3%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RYLFS + + I++ S IS GV + +AL+ +SV NGF++ +
Sbjct: 1 MNFPFYIARRYLFSKKSHNAINVISAISVCGVALATLALVCTLSVFNGFQDLVASFFTAF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + I + D Q + V + + +++G+ ++
Sbjct: 61 DPELKITAVRGKVFDGQDPRVLALKQMPEVAVYSESLEDNAMVQYQGRQAMAVIKGVEDN 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKD-----LARNLGISIGDKINILSPYGDVTP 179
F D I L + +I V
Sbjct: 121 FDRLTPIDSILFGRGSLTLHDEVADYAIPGIQLLSALGSGIRFLDPLEIYAPKRGAKVNV 180
Query: 180 MGMGIRS---KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
++ +F + YD + SL A+ F + VS + + +K
Sbjct: 181 ANPSAAFVSGNLFSSGLVFAVNQEKYDASYILTSLAFARRLFQYDTEVSSVNLRLKPDAD 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQ 262
I+ + LG V D ++
Sbjct: 241 IDAVKRKLQDRLGEEFRVQDRYEQQA 266
>gi|309973221|gb|ADO96422.1| Outer membrane-specific lipoprotein ABC transporter, permease
component LolE [Haemophilus influenzae R2846]
Length = 416
Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 54/266 (20%), Positives = 114/266 (42%), Gaps = 5/266 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY +KN +++ + S IG+ +GV LIV +S MNGF ++ +R+L + H
Sbjct: 4 PFFISWRYQRGKQKNPLVALIAKFSAIGIALGVAVLIVGLSAMNGFERELNQRILAVVPH 63
Query: 68 VV----IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ Q K + +Q + RL P + + PFVS A V S V V+G+
Sbjct: 64 IEIFSAPQAKDPTIHHWQNLEKRLQQNPQIKGISPFVSFTALVENG-SKLKVVQVKGVEK 122
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + N F + G+++G +A+ L + +GD I +L +
Sbjct: 123 QAEDKVSSIGNFVQEQGWNKFGKEGGLVLGSGIAKELDVKVGDWITLLISQQNGDEQFAQ 182
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ + + R+ + + Q + ++G+E+ + DP ++ +
Sbjct: 183 PTREPVQITAILRLDGQLDYSYALLPLAQAQTFLTYQPDQITGVELKLDDPFSVRNLDLS 242
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
++ + + +W ++ + +
Sbjct: 243 MLNDYPQMLYMQNWISKFGYMYRDIQ 268
>gi|313204742|ref|YP_004043399.1| hypothetical protein Palpr_2278 [Paludibacter propionicigenes WB4]
gi|312444058|gb|ADQ80414.1| protein of unknown function DUF214 [Paludibacter propionicigenes
WB4]
Length = 422
Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 52/271 (19%), Positives = 98/271 (36%), Gaps = 7/271 (2%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
F +A RYLFS + + I+I S IS GV +G MAL+ V+SV NGF + +
Sbjct: 17 SFSFRIARRYLFSKKSHNAINIISGISAGGVAVGTMALVCVLSVFNGFDSLISNMFSAFD 76
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+ I + D + + V + + + V+G+ N
Sbjct: 77 PDLKITLTHGKTFDVNSVEFNQLRKDKSVAYFTEVIEENALLRFKNKQMPATVKGVGNDF 136
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGK------DLARNLGISIGDKINILSPYGDVTP 179
+ + GN + + G L + + + ++
Sbjct: 137 EKMTRIDSIMYDGNFILYDGAFQRAVPGVGVAGILGLGAHFIDPLYIFAPKRTSKINLLR 196
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIE 238
V G+F ++ YD+ V +S+ A+ F ++ VS +E+ + +
Sbjct: 197 PENSFNQIGTFVSGIFTVKQSVYDDHYVLVSIDVARDLFEYQKSTVSAVELKLAKGVDSD 256
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
I + LG V + ++ + FF +
Sbjct: 257 VFQAKIRKQLGKDYQVKNRYEQQESFFKIMK 287
>gi|260914184|ref|ZP_05920657.1| lipoprotein ABC superfamily ATP binding cassette transporter,
membrane protein [Pasteurella dagmatis ATCC 43325]
gi|260631817|gb|EEX49995.1| lipoprotein ABC superfamily ATP binding cassette transporter,
membrane protein [Pasteurella dagmatis ATCC 43325]
Length = 396
Score = 105 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 105/267 (39%), Gaps = 9/267 (3%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +A+RY + + F + + ++ IG+ +GVMALI+V+SVMNG + K+VL
Sbjct: 1 MTFSVPLFIAFRYWRAKSADRFGRLVTNLASIGITLGVMALIIVLSVMNGLEQHQKKQVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H ++ + + + N V KV+P + S G+G ++
Sbjct: 61 SHIPHAILMPNEGNVNVNEQLRNVP---DFVQKVVPVNQTGVILQTRSGVGAGQVIGVQQ 117
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
SD L + + ++IG LA+NL ++IGDK+ ++
Sbjct: 118 LSDDPLLSEVLKDSF--ETILAQGSFNLVIGSQLAQNLKLNIGDKVRVMITENSQYTPFG 175
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
+ + + + + +L + + G +F+ DP I +
Sbjct: 176 RVPVQRLFTISDIYYSNSEASGYQAFANLSDIGRLMRIAPTQAQGYRLFLSDPFQINELP 235
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ ++DW+ + FF
Sbjct: 236 YSFNV---EQWKILDWRAQKGEFFQAV 259
>gi|262195151|ref|YP_003266360.1| hypothetical protein Hoch_1920 [Haliangium ochraceum DSM 14365]
gi|262078498|gb|ACY14467.1| protein of unknown function DUF214 [Haliangium ochraceum DSM 14365]
Length = 470
Score = 105 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 68/258 (26%), Positives = 126/258 (48%), Gaps = 13/258 (5%)
Query: 24 FISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFI 83
F S+ + +S +GV++GV AL V ++V GF+E+ +VLG+N HV+I + +Y+ +
Sbjct: 73 FFSVLTSVSGLGVVLGVAALTVTLAVATGFQEEFRAKVLGVNAHVIIMKNTTDFPEYRKV 132
Query: 84 ANRLDFI-PDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGN--- 139
I P+V V PF+ + + + SGV ++G+ + + +
Sbjct: 133 EEVARNIDPEVRAVQPFLFEEMLATRGNGKQSGVAIKGVDPARVGQVLDLQKHIIEGSVE 192
Query: 140 ---VSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD-----VTPMGMGIRSKSYTV 191
+++G++LAR L ++GD+I +++P + T G ++ + V
Sbjct: 193 PLAEQPPPGEPAAIVMGRELARKLDATVGDEITVVAPLSNLDLDTWTASGSAPLTRKFRV 252
Query: 192 LGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL-GN 250
G+F F +YD ++Y+SL EAQ + V G+E+ V D + + + I L G+
Sbjct: 253 GGIFYSGFAEYDQRLMYVSLSEAQELRGQGDRVLGVELKVADVERAREIADKIEAELGGS 312
Query: 251 GVVVIDWQQRYQIFFSCY 268
VV DW + + F+
Sbjct: 313 PYVVQDWYELNRNLFTAL 330
>gi|86157506|ref|YP_464291.1| hypothetical protein Adeh_1079 [Anaeromyxobacter dehalogenans
2CP-C]
gi|85774017|gb|ABC80854.1| protein of unknown function DUF214 [Anaeromyxobacter dehalogenans
2CP-C]
Length = 655
Score = 105 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 70/281 (24%), Positives = 118/281 (41%), Gaps = 28/281 (9%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
LF + + + IS GV IGV AL VV+SVM+GF D+ K++LG H ++
Sbjct: 237 LFHRPRMPATLLMTLISIGGVAIGVWALTVVLSVMSGFEADLKKKILGHTAHGMVLSYGQ 296
Query: 76 PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSR 135
++ + +G +++GI + + +
Sbjct: 297 DDFGDWRRIRETVLGVRGVEAATPFLYNEVMLSTGQNLTGAILKGIDVKTIGSVTDLPAS 356
Query: 136 FYGNVSNDFDRG--------------------------KGVIIGKDLARNLGISIGDKIN 169
D G++IG++LA L + +GD++N
Sbjct: 357 VQDGRLEWLDAPAEIPLPRDGGEAGGAAPERPRPGRPLPGIVIGRELAHALRVFVGDQVN 416
Query: 170 ILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV 229
++SP+GD+ P G +S+ + V +F +YD+ Y+SL EAQ +F +E V+G+EV
Sbjct: 417 LVSPFGDLGPGGPQPKSRPFRVAAVFYSGMYEYDSKFAYISLAEAQRFFGVE-TVTGLEV 475
Query: 230 FVKDPDAIEKTHENIVRILGN-GVVVIDWQQRYQIFFSCYE 269
V+D DA +V LG DW + + FS +
Sbjct: 476 KVRDADAARSVMGRVVFALGGWPYRAKDWGELNRSLFSALQ 516
>gi|329999626|ref|ZP_08303460.1| lipoprotein releasing system, transmembrane protein LolE
[Klebsiella sp. MS 92-3]
gi|328538273|gb|EGF64416.1| lipoprotein releasing system, transmembrane protein LolE
[Klebsiella sp. MS 92-3]
Length = 393
Score = 105 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 53/246 (21%), Positives = 102/246 (41%), Gaps = 1/246 (0%)
Query: 24 FISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFI 83
+S+ S IS IG+ +GV LIV +S MNGF ++ RVL + H I+ P ++Q
Sbjct: 1 MVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRVLAVVPHGEIEPVNQPWNNWQEA 60
Query: 84 ANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSND 143
++ + ++ P+++ V S+ + + + +
Sbjct: 61 LAKVQKVKGIVAAAPYINFTGLVESGSNMRAIQVKGVDPQQESQLSALPTFVQNNAWAGF 120
Query: 144 FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYD 203
+ VI+GK +A L + GD ++I+ P D + + V G+ + D
Sbjct: 121 KAGEQQVILGKGVADALHVKQGDWVSIMIPNADADHQLLQPKRVRLHVTGILQ-LSGQLD 179
Query: 204 NGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQI 263
+ + +Q+AQ Y + +V+GI + V D K + + + V + W Y
Sbjct: 180 HSFAMIPMQDAQQYLEMGGSVTGIAIKVTDVFHANKLVRDAGEVTNSYVYIKSWIGTYGY 239
Query: 264 FFSCYE 269
+ +
Sbjct: 240 MYRDIQ 245
>gi|315126507|ref|YP_004068510.1| lipoprotein releasing system transmembrane protein
[Pseudoalteromonas sp. SM9913]
gi|315015021|gb|ADT68359.1| lipoprotein releasing system transmembrane protein
[Pseudoalteromonas sp. SM9913]
Length = 414
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 53/268 (19%), Positives = 111/268 (41%), Gaps = 7/268 (2%)
Query: 7 FEVIVAWRY--LFSNR--KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ R+ ++ KNAF+S + S IG+++GV LIV +SV+NGF + ++ R+L
Sbjct: 3 LSAFISKRFRAYSGHKDEKNAFVSFIAKASTIGILLGVAVLIVALSVINGFEQQLVHRLL 62
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ V P+ D+ +L P V PF++ S + +
Sbjct: 63 SVVPQVEYVAPSRPIADWPTKVEKLKQQPHVTGAAPFIAVNGMAQFKSQLKAVEIRGVEP 122
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++ ++F G VI+GK + + L I++GD + +L P +
Sbjct: 123 SLEGDV--SAINQFTQGKLVSQLTGDDVILGKQIVKQLNIALGDNVTLLIPQISEKGQSL 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ L D+ ++ L +AQ + + V+G+ + V D + +
Sbjct: 181 LAPKRVTLTLAGIIEMGGPIDSSAAFIHLNKAQQTLGYDQSQVTGLRLRVDDVFSAHQIA 240
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + + V + W + + +
Sbjct: 241 LRVGQTITDYVYISSWLRTQGSLYQDIQ 268
>gi|288803486|ref|ZP_06408918.1| membrane protein [Prevotella melaninogenica D18]
gi|288334096|gb|EFC72539.1| membrane protein [Prevotella melaninogenica D18]
Length = 410
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 56/272 (20%), Positives = 107/272 (39%), Gaps = 8/272 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RYLFS + I++ S IS +GV + MAL+VV+S NGF + +
Sbjct: 1 MNFPFYIARRYLFSKKSTHAINVISLISVLGVSVATMALVVVLSGFNGFSDLVASFFTNF 60
Query: 65 NGHVVIQQKYYPLVDYQFI-ANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ + I+ + ++ +P V V QA + N
Sbjct: 61 DPQIKIEAAKGKAMSANAPLLLKVKKLPSVEVATECVEDQALAIYHDKQAMVNVKGVEDN 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD------- 176
D ++ G+ + ++G LA++LG + +
Sbjct: 121 FDSLTHISNILYGEGDFRLHTANLQYGVLGIRLAQDLGTGVAWPDYLHIYAPQREGQYDA 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
P ++ + +F+++ YD G + SL A+ FN + ++ +E+ +K
Sbjct: 181 SNPTDAFVKDSLISPGVLFQVKQMKYDKGYIITSLDFARRIFNRQGEMTSLELRMKLGVD 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
I+K + I +LG+ V+D ++ F+
Sbjct: 241 IDKAKDEIQTLLGDKYKVLDRYEQQADTFNIM 272
>gi|323261590|gb|EGA45167.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008284]
Length = 244
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 44/242 (18%), Positives = 94/242 (38%), Gaps = 5/242 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q ++ L S S + +
Sbjct: 61 GLMPQAILSAEHGSLNPNQMPEKAVNLQGVNRIA----PLTTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S VI+G+ LA LG++ GD+I ++ P
Sbjct: 117 IDPAQKDPLTPYLVNVKQSELQPGKYNVILGEQLAGQLGVNRGDQIRLMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ + + D + +++Q+A ++G +++ +P ++
Sbjct: 177 RLPSQRLFTVIGTFAANSEVDGYEMLVNIQDASRLMRYPAGNITGWRLWLDEPLQVDTLS 236
Query: 242 EN 243
+
Sbjct: 237 QQ 238
>gi|291617060|ref|YP_003519802.1| LolE [Pantoea ananatis LMG 20103]
gi|291152090|gb|ADD76674.1| LolE [Pantoea ananatis LMG 20103]
Length = 393
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 47/246 (19%), Positives = 92/246 (37%), Gaps = 1/246 (0%)
Query: 24 FISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFI 83
+S+ S IS IG+ +GV LI+ +S MNGF ++ KR+L + H I+ P +Q +
Sbjct: 1 MVSLISVISTIGIALGVAVLIIGLSAMNGFERELNKRILAVVPHGEIEAVNPPFQHWQSM 60
Query: 84 ANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSND 143
++ +P + P+++ + + + V+G+ + L N
Sbjct: 61 IAPIEQVPGIAAAAPYINFTGLIESG-TKMEALQVKGVDPAQEPRLSALPQFVTNNAWAS 119
Query: 144 FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYD 203
F GK II + + + + + D
Sbjct: 120 FAPGKSQIILGGGIAQALNVKQGDWITIMIPNNDGENKLLQPKRIRLQVSGILQLSGMLD 179
Query: 204 NGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQI 263
+ + + L +AQ Y ++ + V+GI + + DP K + V + W Y
Sbjct: 180 HSLALVPLADAQQYLDMGDNVTGIALKMNDPFQAAKLVRAAGEVTHAYVYIKSWIGTYGY 239
Query: 264 FFSCYE 269
+ +
Sbjct: 240 MYRDIQ 245
>gi|295096195|emb|CBK85285.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 386
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 47/254 (18%), Positives = 94/254 (37%), Gaps = 8/254 (3%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +LG+ V+
Sbjct: 1 MRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAVLSSTQG 60
Query: 76 PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSR 135
+ Q + + V L S S + + +
Sbjct: 61 SVNPQQLPESAVKL----QGVTRVAPLTTGDVVLQSARSVAVGVMLGIDPAQKDPLTPFL 116
Query: 136 FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMF 195
++ VI+G+ LA LG++ GD++ ++ P + S+ +
Sbjct: 117 VNVKQTDLEAGKYNVILGEQLAGQLGVNRGDQLRVMVPSASQFTPMGRLPSQRLFNVIGT 176
Query: 196 RMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHENIVRILGNGVVV 254
+ D + +++Q+A ++G +++ P ++ + L G
Sbjct: 177 FAANSEVDGYQMLVNIQDASRLMRYPAGNITGWRLWLDAPLKVDTLS---QQTLPEGTKW 233
Query: 255 IDWQQRYQIFFSCY 268
DW+ R F
Sbjct: 234 QDWRDRKGELFQAV 247
>gi|317180551|dbj|BAJ58337.1| lipoprotein release system transmembrane protein [Helicobacter
pylori F32]
Length = 430
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 62/267 (23%), Positives = 109/267 (40%), Gaps = 2/267 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ RYL ++ FISI + ++F GV +GVM LIV M++MNG ++ K++ +
Sbjct: 24 RSLIFFLIKRYLRFDKSQPFISITALLAFFGVAVGVMVLIVAMAIMNGMSKEFEKKLFVM 83
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N + + + + + P+++ + S S G V S
Sbjct: 84 NYPLTLYTTSPYGISEEVVQALEKKFPNLLFSPYLQTQSLIKSAHSMNGGMVFGVDFSKE 143
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + N ++ F +I+GK L +L + + K ++ + T + +
Sbjct: 144 RRINEVLNDALKNTNENDLFKNPFNLIVGKSLRYSLNLDLNQKADLFFTELEPTGLTLSP 203
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDP-DAIEKTHE 242
K +T+ G F YD +Y SLQ L G+ V+ K P IE
Sbjct: 204 IMKRFTIKGDFDSGLKSYDMSYMYSSLQAISAIRRLPLGLYDGVHVYSKTPMKDIENLRN 263
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I +G+ + W Q+ FFS E
Sbjct: 264 ALKTINHHGIGIEGWWQQNGNFFSAME 290
>gi|261867669|ref|YP_003255591.1| outer membrane-specific lipoprotein transporter subunit LolE
[Aggregatibacter actinomycetemcomitans D11S-1]
gi|261413001|gb|ACX82372.1| lipoprotein releasing system, transmembrane protein LolE
[Aggregatibacter actinomycetemcomitans D11S-1]
Length = 416
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 58/266 (21%), Positives = 121/266 (45%), Gaps = 5/266 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY S +N +S+ +F S +G+ +GV LIV +S MNGF ++ +R+L + H
Sbjct: 4 PFFISWRYQRSKHRNRLVSLIAFFSSMGIALGVAVLIVGLSAMNGFERELNQRILAVVPH 63
Query: 68 VVIQ----QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
I Q P+ +Q +A +L P + + PFVS A V + V ++G+
Sbjct: 64 AEIISAPGQGDAPIDHWQNLAAKLKQNPQIRGISPFVSFTALVENG-AKLKVVQIKGVET 122
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + +F + G+++G +AR+L + GD +++L +
Sbjct: 123 ALQDQVSSLGRFVLNAGWQNFAQNGGLVLGSGIARDLDVQEGDWVSLLISQQKGSENLTQ 182
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ V G+ R+ + + Q QL + V+G+E+ DP +++ +
Sbjct: 183 PLRERIQVTGILRLDGQLDHSYALMPLAQAQQLMNYQADQVTGVELKTADPFSVQNMDYS 242
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+++ + + +W ++ + +
Sbjct: 243 MLQDYPQMLYLQNWISKFGYMYRDIQ 268
>gi|33152006|ref|NP_873359.1| lipoprotein releasing system transmembrane protein [Haemophilus
ducreyi 35000HP]
gi|33148228|gb|AAP95748.1| lipoprotein releasing system transmembrane protein [Haemophilus
ducreyi 35000HP]
Length = 390
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 43/266 (16%), Positives = 89/266 (33%), Gaps = 13/266 (4%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ + +A RY S + F + + ++ +G+++GVMALI V+SVMNG + +L
Sbjct: 1 MNLTSLFIAVRYWRSKSADRFGRLVTNLASLGIILGVMALITVLSVMNGLENMQKRNLLS 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
H ++ Q + V V Q+ + G
Sbjct: 61 ALPHAIVSPVNGYFEKTQTLDLPAFVTQSVAINQTNVIIQS---------QQAINAGQLI 111
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + V+IG LA L I G+KI ++
Sbjct: 112 GVEQASDDPLLTDHDIEHLLPSGRFNVLIGSRLAHKLNIHPGEKIRLMITENSQYTPMGR 171
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHE 242
+ + + + ++ +L + + + G ++++DP + +
Sbjct: 172 VPVQRLFTVAGLYFADHESSEYTLFANLADVGRLLRIDPEQLQGKRLYLQDPFMVTELAT 231
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCY 268
+ DW+++ FF
Sbjct: 232 FFS---PTQYKISDWREQKGEFFQAV 254
>gi|323202443|gb|EFZ87485.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Montevideo
str. 609460]
Length = 245
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 44/242 (18%), Positives = 94/242 (38%), Gaps = 5/242 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q ++ L S S + +
Sbjct: 61 GLMPQAILSAEHGSLNPNQMPEKAVNLQGVNRIA----PLTTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S VI+G+ LA LG++ GD+I ++ P
Sbjct: 117 IDPAQKDPLTPYLVNVKQSELQPGKYNVILGEQLAGQLGVNRGDQIRLMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ + + D + +++Q+A ++G +++ +P ++
Sbjct: 177 RLPSQRLFTVIGTFAANSEVDGYEMLVNIQDASRLMRYPAGNITGWRLWLDEPLQVDTLS 236
Query: 242 EN 243
+
Sbjct: 237 QQ 238
>gi|303236419|ref|ZP_07323008.1| efflux ABC transporter, permease protein [Prevotella disiens
FB035-09AN]
gi|302483391|gb|EFL46397.1| efflux ABC transporter, permease protein [Prevotella disiens
FB035-09AN]
Length = 409
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 54/272 (19%), Positives = 100/272 (36%), Gaps = 8/272 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RYLFS + I++ S IS IGV + MAL+VV+S NGF + +
Sbjct: 1 MNFPFYIARRYLFSKKSTHAINVISLISVIGVAVATMALVVVLSGFNGFSDLVASFFTNF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + ++ + + V ++ V ++G+ N+
Sbjct: 61 DPQIKVEAAKGKAIAADNPTLAKIKKLPFVAVSTECVTDQALATYHGKQVMVTIKGVENN 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGV---IIGKDLARNLGISIGDKINILSPYGDVTPMG 181
S + F IG N + D + I +P
Sbjct: 121 FDSLTNIRETLFGDGDFRLQVANLEYGVLGIGVAQQLNTSVHWDDFLRIYAPQRKGQYDA 180
Query: 182 MGIRSKS-----YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
+ + +F+++ YDN + S+ A+ FN + ++ +E+ +K +
Sbjct: 181 SNPTNAFVADSLVSPGVVFQVKQSKYDNNFIVTSIGFARRIFNRQGEITSLELRLKAGED 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
IEK I ++ G VV D ++ F+
Sbjct: 241 IEKAKAGIEQLAGKDFVVKDRYEQQADTFNIM 272
>gi|220916313|ref|YP_002491617.1| protein of unknown function DUF214 [Anaeromyxobacter dehalogenans
2CP-1]
gi|219954167|gb|ACL64551.1| protein of unknown function DUF214 [Anaeromyxobacter dehalogenans
2CP-1]
Length = 655
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 69/282 (24%), Positives = 117/282 (41%), Gaps = 29/282 (10%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
LF + + + IS GV IGV AL VV+SVM+GF D+ K++LG H ++
Sbjct: 236 LFHRPRMPATLLMTLISIGGVAIGVWALTVVLSVMSGFEADLKKKILGHTAHGMVLSYGQ 295
Query: 76 PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSR 135
++ + +G +++GI + + +
Sbjct: 296 DDFGDWRRIRETVLGVRGVEAATPFLYNEVMLSTGQNLTGAILKGIDVKTIGSVTDLPAS 355
Query: 136 FYGNVSND---------------------------FDRGKGVIIGKDLARNLGISIGDKI 168
G++IG++LA L + +GD++
Sbjct: 356 VQDGRLEWLEAPAEIPLPREGGNGDAGAAPERPRPGRPLPGIVIGRELAHALRVFVGDQV 415
Query: 169 NILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIE 228
N++SP+GD+ P G +S+ + V +F +YD+ Y+SL EAQ +F +E V+G+E
Sbjct: 416 NLVSPFGDLGPGGPQPKSRPFRVAAVFYSGMYEYDSKFAYISLPEAQRFFGVE-TVTGLE 474
Query: 229 VFVKDPDAIEKTHENIVRILGN-GVVVIDWQQRYQIFFSCYE 269
V V+D DA +V LG DW + + FS +
Sbjct: 475 VKVRDADAARSVMGRVVFALGGWPYRAKDWGELNRSLFSALQ 516
>gi|224025277|ref|ZP_03643643.1| hypothetical protein BACCOPRO_02016 [Bacteroides coprophilus DSM
18228]
gi|224018513|gb|EEF76511.1| hypothetical protein BACCOPRO_02016 [Bacteroides coprophilus DSM
18228]
Length = 407
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 45/266 (16%), Positives = 88/266 (33%), Gaps = 8/266 (3%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RYLFS + + I++ S IS GV + +AL+ +SV NGF+ +
Sbjct: 1 MNFSFYIARRYLFSKKSHNAINVISGISVCGVALATLALVCTLSVFNGFQSLVSDYFTAF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + I + D Q + I+V+ + + +++G+ ++
Sbjct: 61 DPELKITPVTGKVFDGQDPKIQALRSMPEIEVVSESLEDNAMVQYKGRQAMAVIKGVEDN 120
Query: 125 DFSYLQNSFSRFYGNVSNDF-----DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
F G+ + L + +I V
Sbjct: 121 FDRLTPIDSILFGRGDLLLHDEVADYAIPGIQLLSVLGSGIRFLDPLEIYAPKRGAKVNL 180
Query: 180 MGMGIRS---KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
+ + ++ F + YD + SL A+ F VS + + +K
Sbjct: 181 ANPAMAFTGERLFSTGLTFAVNQEKYDASYILTSLSFARRLFQYTTEVSSVGLKLKPDAD 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQ 262
+ LG+ V D ++
Sbjct: 241 PGVVKRKLKEHLGDRFRVEDRYEQQA 266
>gi|327393510|dbj|BAK10932.1| lipoprotein-releasing system transmembrane protein LolE [Pantoea
ananatis AJ13355]
Length = 414
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 49/256 (19%), Positives = 96/256 (37%), Gaps = 1/256 (0%)
Query: 14 RYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQK 73
R+ R+ +S+ S IS IG+ +GV LI+ +S MNGF ++ KR+L + H I+
Sbjct: 12 RFSRGRRRGGMVSLISVISTIGIALGVAVLIIGLSAMNGFERELNKRILAVVPHGEIEAV 71
Query: 74 YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSF 133
P +Q + ++ +P + P+++ + + + V+G+ + L
Sbjct: 72 NPPFQHWQSMIAPIEQVPGIAAAAPYINFTGLIESG-TKMEALQVKGVDPAQEPRLSALP 130
Query: 134 SRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLG 193
N F GK II + + + + +
Sbjct: 131 QFVTNNAWASFAPGKSQIILGGGIAQALNVKQGDWITIMIPNNDGENKLLQPKRIRLQVS 190
Query: 194 MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVV 253
D+ + + L +AQ Y ++ + V+GI + + DP K + V
Sbjct: 191 GILQLSGMLDHSLALVPLADAQQYLDMGDNVTGIALKMNDPFQAAKLVRAAGEVTHAYVY 250
Query: 254 VIDWQQRYQIFFSCYE 269
+ W Y + +
Sbjct: 251 IKSWIGTYGYMYRDIQ 266
>gi|255534035|ref|YP_003094407.1| hypothetical protein Phep_4154 [Pedobacter heparinus DSM 2366]
gi|255347019|gb|ACU06345.1| protein of unknown function DUF214 [Pedobacter heparinus DSM 2366]
Length = 411
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 91/267 (34%), Gaps = 6/267 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A RYLF+ + I+I S IS GV +G ALI+++SV NGF E ++K I
Sbjct: 4 PFYIARRYLFAKKSTNAINIISTISVAGVFVGSAALIIILSVFNGFEEVVLKMFNTITPQ 63
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+VI + I V + + + S LV+G+S
Sbjct: 64 IVISPLKGKTFNPNTTYFNELRKDKEIYSFTEVLSENALLRYNDKQSVGLVKGVSTDYLK 123
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
GN + +IG + L ++ D L +
Sbjct: 124 NKSLDSITIDGNFVLESKSLNYAVIGSAIQNFLMVNTTDPFYPLQIFSPKKKANQASSIN 183
Query: 188 SYTVLGMFRMR------FPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ + + M + L+ A+ +S IE+ + +
Sbjct: 184 PADDFTILSIPVSGVFEVQQDFDNMAIVPLRFARKLLEEPLNISAIEINLHKGADADLFR 243
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ I +G + D Q+ ++ ++
Sbjct: 244 QKIEDQIGENFEIKDRIQQNKVLYNIL 270
>gi|319776399|ref|YP_004138887.1| outer membrane-specific lipoprotein transporter subunit
[Haemophilus influenzae F3047]
gi|317450990|emb|CBY87220.1| outer membrane-specific lipoprotein transporter subunit
[Haemophilus influenzae F3047]
Length = 416
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 55/266 (20%), Positives = 116/266 (43%), Gaps = 5/266 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY +KN +++ + S IG+ +GV LIV +S MNGF ++ +R+L + H
Sbjct: 4 PFFISWRYQRGKQKNPLVALIAKFSAIGIALGVAVLIVGLSAMNGFERELNQRILAVVPH 63
Query: 68 VV----IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ Q+K + +Q + RL P + + PFVS A V S V V+G+
Sbjct: 64 IEIFSAPQEKDPTIHHWQNLEKRLQQNPQIKGISPFVSFTALVENG-SKLKVVQVKGVKK 122
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + N F++ G+++G +A+ L + +GD I +L +
Sbjct: 123 QAEDKVSSIGNFVQEQGWNKFEKEGGLVLGAGIAKELDVKVGDWITLLISQQNGDEQFAQ 182
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ V + R+ + + Q + ++G+E+ + DP ++ +
Sbjct: 183 PTREPVQVTAILRLDGQLDYSYALLPFAQAQTFLTYQPDQITGVELKLDDPFSVRNLDLS 242
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
++ + + +W ++ + +
Sbjct: 243 MLNDYPQMLYMQNWISKFGYMYRDIQ 268
>gi|15611791|ref|NP_223442.1| hypothetical protein jhp0724 [Helicobacter pylori J99]
gi|4155280|gb|AAD06298.1| putative [Helicobacter pylori J99]
Length = 410
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 63/267 (23%), Positives = 110/267 (41%), Gaps = 2/267 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ RYL ++ FISI + ++F GV +GVM LIV M++MNG ++ K++ +
Sbjct: 4 RSLIFFLIKRYLRFDKSQPFISITALLAFFGVAVGVMVLIVAMAIMNGMSKEFEKKLFVM 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N + + + + + P+++ + S S G V S
Sbjct: 64 NYPLTLYTTSPYGISEEVVQALEKKFPNLLFSPYLQTQSPIKSAHSMNGGVVFGVDFSKE 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + N ++ F +I+GK L +L + + K ++ + T + +
Sbjct: 124 RHINEVLNDALKNINENDLFKNPFNLIVGKSLRYSLNLDLNQKADLFFTELEPTGLTLSP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDP-DAIEKTHE 242
K +T+ G F YD +Y SLQ L G+ V+ K P IEK
Sbjct: 184 IMKRFTIKGDFDSGLKSYDMSYMYASLQAISAIRRLPLGLYDGVHVYSKTPMKDIEKLRN 243
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I +G+ + W Q+ FFS E
Sbjct: 244 ALKTINHHGIGIEGWWQQNGNFFSAME 270
>gi|325860219|ref|ZP_08173344.1| efflux ABC transporter, permease protein [Prevotella denticola CRIS
18C-A]
gi|325482306|gb|EGC85314.1| efflux ABC transporter, permease protein [Prevotella denticola CRIS
18C-A]
Length = 410
Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 54/272 (19%), Positives = 108/272 (39%), Gaps = 8/272 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RYLFS + I++ S IS +GV + MAL+VV+S NGF + +
Sbjct: 1 MNFPFYIARRYLFSKKSTHAINVISLISVLGVSVATMALVVVLSGFNGFSDLVASFFTNF 60
Query: 65 NGHVVIQQKYYPLVDYQFI-ANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ + I+ + ++ +P V V QA + N
Sbjct: 61 DPQLKIEAAKGKAMPADDALLQKVKRLPTVEVATECVEDQALAVYHDKQAMVTVKGVEDN 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARN--LGISIGDKINILSPYGDVTPMG 181
D ++ G+ + + ++G LA++ G++ D + I +P +
Sbjct: 121 FDSLTHISNILYGDGDFTLHAANLQYGVLGIRLAQDLGTGVAWQDYLQIYAPRREGQYDA 180
Query: 182 MGIRSKSYT-----VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
+ +F+++ YD G + S+ A+ FN + ++ +E+ ++
Sbjct: 181 SDPTNAFVKDSLVSPGVLFQVKQTKYDKGYIITSIDFARRIFNRQGEITSLELRMRPGVD 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
I++ + I I G V+D ++ F+
Sbjct: 241 IDREKQEIQDIFGRKYRVLDRYEQQADTFNIM 272
>gi|304413561|ref|ZP_07395034.1| membrane component LolE of outer membrane-specific lipoprotein
transporter [Candidatus Regiella insecticola LSR1]
gi|304284404|gb|EFL92797.1| membrane component LolE of outer membrane-specific lipoprotein
transporter [Candidatus Regiella insecticola LSR1]
Length = 426
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 51/279 (18%), Positives = 98/279 (35%), Gaps = 13/279 (4%)
Query: 3 IFS-RFEVIVAWRYLFSNRKNA-----------FISIASFISFIGVMIGVMALIVVMSVM 50
+F+ ++A R+ R +S+ S IS +G+ +GV LI+ +S M
Sbjct: 1 MFAWPLSFLIALRFSCGRRARGGDKTNANAGNPILSLLSVISTLGITLGVAVLILGLSAM 60
Query: 51 NGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLS 110
NGF ++ RVL + H I P + + R++ + +I P++ +
Sbjct: 61 NGFERELKNRVLAVVPHGKIAFVEQPFNRWPSLLERIEQVTGIIAAAPYIEFTGLIESG- 119
Query: 111 SGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINI 170
S V ++G+ L + +DF G+ II +
Sbjct: 120 SQLRAVQIKGVDPQAEKKLSALPHFMINSAWDDFRAGEQQIILGKGLADALGVTQGAWLT 179
Query: 171 LSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVF 230
L + M + + + D+ + + L AQ Y + +V+GI +
Sbjct: 180 LMISNNDPSMKLLQPKRIRLRVAGLFQLSGQLDHSLAMLPLVHAQKYLEMGQSVTGIAIK 239
Query: 231 VKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
V D + + + V W Y + +
Sbjct: 240 VSDVFNAHQLTRDAAEVTQAYVQFSSWMGTYGYMYRDIQ 278
>gi|317011003|gb|ADU84750.1| lipoprotein release system transmembrane protein [Helicobacter
pylori SouthAfrica7]
Length = 410
Score = 104 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 58/267 (21%), Positives = 105/267 (39%), Gaps = 2/267 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ RYL ++ FISI + ++F GV +GVM LIV M++MNG ++ K++ +
Sbjct: 4 RSLIFFLIKRYLRFDKSQPFISITALLAFFGVAVGVMVLIVAMAIMNGMSKEFEKKLFVM 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N + + + + + P+++ + S S G V S
Sbjct: 64 NYPLTLYTTSPYGISEEVVQALEKKFPNLLFSPYLQTQSLIKSAHSMNGGVVFGVDFSKE 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + + +IIGK L +L + + K ++ + T + +
Sbjct: 124 RRINEVLNDALKNMDEKELTKNPFSLIIGKSLRYSLNLDLNQKADLFFTELEPTGLTLSP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDP-DAIEKTHE 242
K + + G F YD +Y ++Q L G+ V+ K P IE
Sbjct: 184 IMKRFVIKGGFDSGLKSYDMSYMYTNIQALSAIRRLPLGLYDGVHVYSKTPMKDIENIRN 243
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I +G+ + W Q+ FFS E
Sbjct: 244 ALKTINHHGIGIEGWWQQNGNFFSAME 270
>gi|213024281|ref|ZP_03338728.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Typhi str.
404ty]
Length = 242
Score = 104 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/241 (18%), Positives = 94/241 (39%), Gaps = 5/241 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ ++ L Q ++ L S S + +
Sbjct: 61 GLMPQAILSAEHGSLNPNQMPEKAVNLQGVNRIA----PLTTGDVVLQSARSVAVGVMLG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S VI+G+ LA LG++ GD+I ++ P
Sbjct: 117 IDPAQKDPLTPYLVNVKQSELQPGKYNVILGEQLAGQLGVNRGDQIRLMVPSASQFTPMG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ S+ + + D + +++Q+A ++G +++ +P ++
Sbjct: 177 RLPSQRLFTVIGTFAANSEVDGYEMLVNIQDASRLMRYPAGNITGWRLWLDEPLQVDTLS 236
Query: 242 E 242
+
Sbjct: 237 Q 237
>gi|260914182|ref|ZP_05920655.1| lipoprotein ABC superfamily ATP binding cassette transporter,
permease protein [Pasteurella dagmatis ATCC 43325]
gi|260631815|gb|EEX49993.1| lipoprotein ABC superfamily ATP binding cassette transporter,
permease protein [Pasteurella dagmatis ATCC 43325]
Length = 417
Score = 104 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 52/266 (19%), Positives = 101/266 (37%), Gaps = 4/266 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY S +KN +S+ S S IG+ +GV LIV +S MNGF ++ +R+L + H
Sbjct: 4 PFFISWRYQRSKQKNRLVSLISTFSSIGIALGVAVLIVGLSAMNGFERELNQRILAVVPH 63
Query: 68 VVIQQKYYPLVDY----QFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
I + + L I + + + V V+G+
Sbjct: 64 AEIAAYPNHKGERVILSKHKLKYLLESHSEIIGVSPYVSFTALVENGTKLKVVQVKGVEK 123
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + F+ G+I+G +A+ LG++IGD +++L
Sbjct: 124 QAQDKVSSIGNFVLDKAWQSFNEKSGLILGYGIAKELGVNIGDWVSLLISQTTDEQQLSQ 183
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
V G+ R+ + + Q Q +G+E+ VK P + +
Sbjct: 184 PTRHRIQVSGILRLDGQLDHSYALLPLEQAQQFLNFRPEQATGVELKVKHPFEVRQLEYP 243
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
++ + W ++ + +
Sbjct: 244 MLSDYPQALYAQHWINKFGYMYRDIQ 269
>gi|319776406|ref|YP_004138894.1| Lipoprotein releasing system transmembrane protein [Haemophilus
influenzae F3047]
gi|317450997|emb|CBY87227.1| Lipoprotein releasing system transmembrane protein [Haemophilus
influenzae F3047]
Length = 388
Score = 104 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 54/267 (20%), Positives = 108/267 (40%), Gaps = 17/267 (6%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +A RY + + F + + ++ +G+++GVMALI+V+SVMNG ++VL
Sbjct: 1 MNFPISLYIALRYWRAKSADRFGRLVTNLASLGIVLGVMALIIVLSVMNGLEGYQKQQVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H ++ ++ L+ +P ++ ++ + + G S + GI
Sbjct: 61 SSIPHAIVSEEQPI-----STEKTLENLPHFVQKAVPINTTNVIYQTAKGVSAGQIIGIQ 115
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ L SF + N ++IG LA+ LG++IGDKI ++
Sbjct: 116 SFSDDPLVESFDQTKFNEI-LPRGEFKLVIGDQLAQKLGVNIGDKIRLMITENSQYTPFG 174
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
+ + F + YD G + ++ + + G +F+ DP I
Sbjct: 175 RVPMQRL-----FTVSDIYYDYGEAFANITDIGRLMRIQPQQAQGYRLFLNDPFQI---- 225
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + + DW+ + FF
Sbjct: 226 TELPQHFPIQ-KITDWRVQKGEFFQAV 251
>gi|315586549|gb|ADU40930.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Helicobacter pylori 35A]
Length = 430
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 62/267 (23%), Positives = 109/267 (40%), Gaps = 2/267 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ RYL ++ FISI + ++F GV +GVM LIV M++MNG ++ K++ +
Sbjct: 24 RSLIFFLIKRYLRFDKSQPFISITALLAFFGVAVGVMVLIVAMAIMNGMSKEFEKKLFVM 83
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N + + + + + P+++ + S S G V S
Sbjct: 84 NYPLTLYTTSPYGISEEVVQALEKKFPNLLFSPYLQTQSLIKSAHSMNGGVVFGVDFSKE 143
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + N ++ F +I+GK L +L + + K ++ + T + +
Sbjct: 144 RRINEVLNDALKNTNENDLFKNPFNLIVGKSLRYSLNLDLNQKADLFFTELEPTGLTLSP 203
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDP-DAIEKTHE 242
K +T+ G F YD +Y SLQ L G+ V+ K P IE
Sbjct: 204 IMKRFTIKGDFDSGLKSYDMSYMYSSLQAISTIRRLPLGLYDGVHVYSKTPMKDIENLRN 263
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I +G+ + W Q+ FFS E
Sbjct: 264 ALKTINHHGIGIEGWWQQNGNFFSAME 290
>gi|260597489|ref|YP_003210060.1| outer membrane-specific lipoprotein transporter subunit LolE
[Cronobacter turicensis z3032]
gi|260216666|emb|CBA30004.1| Lipoprotein-releasing system transmembrane protein lolE
[Cronobacter turicensis z3032]
Length = 389
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 49/242 (20%), Positives = 90/242 (37%), Gaps = 1/242 (0%)
Query: 28 ASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRL 87
S IS IG+ +GV LIV +S MNGF ++ R+L + H I+ P +Q + R+
Sbjct: 1 MSVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEPVEQPWRGWQDVVTRV 60
Query: 88 DFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRG 147
+ + ++ P+V+ V + + V+G+ + L N F G
Sbjct: 61 EKVNGIVAAAPYVNFTGLVESG-TNLRAIQVKGVDPAQEQRLSALPHYVQNNAWQSFQAG 119
Query: 148 KGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMV 207
K II + + + + + D+
Sbjct: 120 KQQIIVGKGVADALKVKQGDWLSIMIPNSDADHKLLQPKRVRLQVAGILQLSGQLDHSFA 179
Query: 208 YMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSC 267
+ L +AQ Y NL ++V+GI + V D + + ++ V + W Y +
Sbjct: 180 MVPLTDAQGYLNLGDSVTGIAIKVNDVFNANQLVRDAGQVTDAYVYIKSWINTYGYMYRD 239
Query: 268 YE 269
+
Sbjct: 240 IQ 241
>gi|154148848|ref|YP_001406500.1| lipoprotein release system transmembrane protein [Campylobacter
hominis ATCC BAA-381]
gi|153804857|gb|ABS51864.1| lipoprotein release system transmembrane protein [Campylobacter
hominis ATCC BAA-381]
Length = 396
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 51/260 (19%), Positives = 103/260 (39%), Gaps = 9/260 (3%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+ ++YL ++ FI++++ ++FIGV +G+M LIV M++MNGF ++ +++ +N +
Sbjct: 4 YLLFKYLRFDKTQPFITLSAILAFIGVSVGLMVLIVAMAIMNGFDKEFERKLFTMNYPIT 63
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
I + + + N P + S + G + I +
Sbjct: 64 IFSPFRGAITADEVDNLKTMFPQMKF-----SPYITSQVIVKSGEKLEGGLIFGVNIEDE 118
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
+ S + + G+++G L L + DK+ ++ D + + + K +
Sbjct: 119 KQINSVVKDGIKDANLTDFGILLGSGLTGELNTAKNDKVTLIFTKNDPSGFSLIPKMKRF 178
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHENIVRIL 248
V F YD +Y + + E G+ ++ DP + I IL
Sbjct: 179 DVRADFTSGLIAYDKVYMYANADDLAKILGYESGDFDGVHIYSDDPFN---DIKKINEIL 235
Query: 249 GNGVVVIDWQQRYQIFFSCY 268
I W ++ FFS
Sbjct: 236 PQTARAIGWWEQNGNFFSAL 255
>gi|268316896|ref|YP_003290615.1| hypothetical protein Rmar_1338 [Rhodothermus marinus DSM 4252]
gi|262334430|gb|ACY48227.1| protein of unknown function DUF214 [Rhodothermus marinus DSM 4252]
Length = 414
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 52/273 (19%), Positives = 108/273 (39%), Gaps = 7/273 (2%)
Query: 3 IFSR--FEVIVAWRYLF----SNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFRED 56
+ R FE+ VA RYL F+ ++I+ GV +GV AL++ +S+++GF +
Sbjct: 1 MLRRLYFELFVALRYLRGAQGREEGRRFLRFITYIAIGGVTVGVAALLLALSIVHGFSRE 60
Query: 57 MIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
+ ++ G H+ ++ + + + V + +
Sbjct: 61 IEAKITGFGAHIQVENLRDAPLSDAAWMETALQHMPGVVSVRPVIQEFVLIRRGRREVDG 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
+ S + YLQ + D G+IIG+ LA LG+ +GD + + S
Sbjct: 121 VALWGSPTLPEYLQQHLVAGTARFTPDSLGRPGLIIGRQLAEQLGLKVGDLVTLFSMRRL 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPD 235
+ + +R + + V G++ D+D V+ SL A+ + V+ ++ +++
Sbjct: 181 PSSVRPRVRVRQFYVAGLYETLLADFDQLYVFTSLDAARALLEYGPDEVTRFDLTLQNVQ 240
Query: 236 AIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
I G V+ + ++ F+
Sbjct: 241 DALHIARQIEDHFGLPVIARTIYEVFRNLFAWV 273
>gi|307137753|ref|ZP_07497109.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli H736]
gi|331641661|ref|ZP_08342796.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli H736]
gi|331038459|gb|EGI10679.1| lipoprotein releasing system, transmembrane protein LolE
[Escherichia coli H736]
Length = 393
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/246 (19%), Positives = 95/246 (38%), Gaps = 1/246 (0%)
Query: 24 FISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFI 83
+S+ S IS IG+ +GV LIV +S MNGF ++ R+L + H I+ P ++Q
Sbjct: 1 MVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWTNWQEA 60
Query: 84 ANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSND 143
+ + +P + P+++ V + + V+G++ L S G+ +
Sbjct: 61 LDHVQKVPGIAAAAPYINFTGLVESG-ANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRN 119
Query: 144 FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYD 203
F G+ II + + + + + D
Sbjct: 120 FKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQLSGQLD 179
Query: 204 NGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQI 263
+ + L +AQ Y ++ ++VSGI + + D K + + + V + W Y
Sbjct: 180 HSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGEVTNSYVYIKSWIGTYGY 239
Query: 264 FFSCYE 269
+ +
Sbjct: 240 MYRDIQ 245
>gi|293433407|ref|ZP_06661835.1| lipoprotein releasing system [Escherichia coli B088]
gi|291324226|gb|EFE63648.1| lipoprotein releasing system [Escherichia coli B088]
Length = 393
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/246 (19%), Positives = 94/246 (38%), Gaps = 1/246 (0%)
Query: 24 FISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFI 83
+S+ S IS IG+ +GV LIV +S MNGF ++ R+L + H I+ P ++Q
Sbjct: 1 MVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWTNWQEA 60
Query: 84 ANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSND 143
+ + +P + P+++ V + V+G++ L S G+ +
Sbjct: 61 LDHVQKVPGIAAAAPYINFTGLVESG-VNLRAIQVKGVNPQQEQRLSALPSFVQGDAWRN 119
Query: 144 FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYD 203
F G+ II + + + + + D
Sbjct: 120 FKAGEQQIIIGKGVADALKVKQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQLSGQLD 179
Query: 204 NGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQI 263
+ + L +AQ Y ++ ++VSGI + + D K + + + V + W Y
Sbjct: 180 HSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRDAGEVTNSYVYIKSWIGTYGY 239
Query: 264 FFSCYE 269
+ +
Sbjct: 240 MYRDIQ 245
>gi|262043180|ref|ZP_06016316.1| lipoprotein releasing system [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259039458|gb|EEW40593.1| lipoprotein releasing system [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 393
Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 53/246 (21%), Positives = 102/246 (41%), Gaps = 1/246 (0%)
Query: 24 FISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFI 83
+S+ S IS IG+ +GV LIV +S MNGF ++ RVL + H I+ P ++Q
Sbjct: 1 MVSLISVISTIGIAMGVAVLIVGLSAMNGFERELNNRVLAVVPHGEIEPVNQPWNNWQEA 60
Query: 84 ANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSND 143
++ + ++ P+++ V S+ + + + +
Sbjct: 61 LAKVQKVKGIVAAAPYINFTGLVESGSNMRAIQVKGVDPQQESQLSALPTFVQNNAWAGF 120
Query: 144 FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYD 203
+ VI+GK +A L + GD ++I+ P D + + V G+ + D
Sbjct: 121 KAGEQQVILGKGVADALHVKQGDWVSIMIPNADADHQLLQPKRVRLHVTGILQ-LSGQLD 179
Query: 204 NGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQI 263
+ + +Q+AQ Y + +V+GI + V D K + + + V + W Y
Sbjct: 180 HSFAMIPMQDAQQYLEMGGSVTGIAIKVTDVFHANKLVRDAGEVTNSYVYIKSWIGTYGY 239
Query: 264 FFSCYE 269
+ +
Sbjct: 240 MYRDIQ 245
>gi|113461087|ref|YP_719155.1| lipoprotein releasing system, transmembrane protein [Haemophilus
somnus 129PT]
gi|112823130|gb|ABI25219.1| lipoprotein releasing system, transmembrane protein [Haemophilus
somnus 129PT]
Length = 396
Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 52/268 (19%), Positives = 104/268 (38%), Gaps = 11/268 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +A RY + + F + + ++ +G+++GVMALI+V+SVMNG + ++VL
Sbjct: 1 MTFPISLFIALRYWRAKSADHFGQLVTTLATVGIILGVMALIIVLSVMNGLEKYQKQQVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H ++ K + + V KV+P + +G ++
Sbjct: 61 SNIPHSILMPKNNSIYLTASQPDMP---DFVQKVVPINTTSVVFQTAQGVSAGQILGVQK 117
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
SD L + +IIG LA+ L + IGDK+ ++
Sbjct: 118 FSDDPLLSEFSENHFS--QLLPIGEFKLIIGWKLAQKLNVQIGDKVRVMVTENSQYTPFG 175
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFN-LENAVSGIEVFVKDPDAIEKTH 241
+ + + F + + V+ +L + V G +F++DP I +
Sbjct: 176 RVPVQRLFTISDIYSSFSEQASYAVFANLADIGRLMRIKPEQVQGYRLFLQDPFFISE-- 233
Query: 242 ENIVRILG-NGVVVIDWQQRYQIFFSCY 268
+ + ++DW+ + FF
Sbjct: 234 --LPKFFPTEQWKIVDWRSQKGEFFQAV 259
>gi|319956888|ref|YP_004168151.1| hypothetical protein Nitsa_1149 [Nitratifractor salsuginis DSM
16511]
gi|319419292|gb|ADV46402.1| protein of unknown function DUF214 [Nitratifractor salsuginis DSM
16511]
Length = 406
Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 50/266 (18%), Positives = 100/266 (37%), Gaps = 7/266 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
SR + YL + +N FI +++ ++F+G+ GVM L++ M +M G +++ K++ +
Sbjct: 7 SRLVRRIVRHYLRYDPENPFIFVSALLAFLGIAAGVMVLMIAMGIMTGTQKEFEKKLFVM 66
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N + I + + ++ G ++ G+ +
Sbjct: 67 NYPLTIISYSGGVRRATLKK---IRQRFPEMKMSPFYTTQVIARNGEALEGGILYGVDFA 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + F++ + +I G DLA L G KI + +G
Sbjct: 124 KEAAINPIFAKTLKEHNITRPGRYDLITGDDLAMVLDARPGQKITLFFSQYQAAGLGTLP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHEN 243
K + + G F YD ++Y +L + G+ ++ DP +
Sbjct: 184 LQKRFVLRGTFDSGLKAYDKALMYTTLGAFHKILKKAPDRYDGVHLYTDDPFGA---IKE 240
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
I +L + V W Q+ FFS +
Sbjct: 241 IKALLPDDADVEGWWQQNGNFFSAMQ 266
>gi|315453132|ref|YP_004073402.1| Lipoprotein release system protein [Helicobacter felis ATCC 49179]
gi|315132184|emb|CBY82812.1| putative Lipoprotein release system protein [Helicobacter felis
ATCC 49179]
Length = 410
Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 56/261 (21%), Positives = 102/261 (39%), Gaps = 2/261 (0%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+ RYL ++ FISI + ++F GV +GVM LIV M++MNG ++ ++ +N +
Sbjct: 9 FLVRRYLRFDKNQPFISITALLAFFGVAVGVMVLIVAMAIMNGMSKEFEDKLFVMNYPLT 68
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ Y + + P++ S S G + +
Sbjct: 69 LYTTSYSGISQNTLNALEKKFPNLRFSPYLQSQVVVRSQGMVNGGMLFGVDMDKELQLNS 128
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
+ + ++IGK LA++L + +I++ + T + K +
Sbjct: 129 VLKKGLSPTQIESFKSNPFHIVIGKTLAQSLSLGHATQIDLFFTKLEPTGFVLSPTMKRF 188
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKD-PDAIEKTHENIVRI 247
V G F YDN +Y SL+ NL G+ ++ + + K E + I
Sbjct: 189 RVDGFFESGLHAYDNSYLYTSLEALSAIRNLPPGIYDGVHIYSAHAMEDMPKIKEALKSI 248
Query: 248 LGNGVVVIDWQQRYQIFFSCY 268
+G + W Q+ FFS
Sbjct: 249 PNDGADIEGWWQQNGNFFSAM 269
>gi|167753900|ref|ZP_02426027.1| hypothetical protein ALIPUT_02185 [Alistipes putredinis DSM 17216]
gi|167658525|gb|EDS02655.1| hypothetical protein ALIPUT_02185 [Alistipes putredinis DSM 17216]
Length = 402
Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 52/264 (19%), Positives = 100/264 (37%), Gaps = 4/264 (1%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
A RYLFS + + I++ + +S + + V A+IV++SV+NGF + +
Sbjct: 2 LTRFFARRYLFSPKSRSVINVIAGVSVLSFAMPVAAMIVLLSVLNGFGDFAKSMSSAFDA 61
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
+ + + I + + V+ ++ Q + + +RG+ +
Sbjct: 62 DLTVAPREGQTFASAEIDSLALTRVKGVGVVSYLLEQQVLLERDGLQTMATLRGVDDRYT 121
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ G+ S +++G+D+AR LGI + + +
Sbjct: 122 EVFPIEETIPLGSWSVRTGDLDRLVLGRDMARTLGIRSLVRAEVAVYALRRGSFSSLLPV 181
Query: 187 KSYT----VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
Y+ +G + +N SL+ AQ F+ +S I V V D EK
Sbjct: 182 DGYSVRRLDVGGLFFLDLESENEYALTSLRAAQELFDRPGRISAISVRVADGADAEKVRR 241
Query: 243 NIVRILGNGVVVIDWQQRYQIFFS 266
I I+G+ V + +FF
Sbjct: 242 EIAGIVGDDFTVRTRDEMNALFFR 265
>gi|284035919|ref|YP_003385849.1| hypothetical protein Slin_0999 [Spirosoma linguale DSM 74]
gi|283815212|gb|ADB37050.1| protein of unknown function DUF214 [Spirosoma linguale DSM 74]
Length = 402
Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 47/269 (17%), Positives = 96/269 (35%), Gaps = 5/269 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+A RY FS +K +FIS S +S +GV +G MAL+VV+SV NG E +
Sbjct: 1 MNLPAWIARRYFFSRKKRSFISWLSILSMLGVGVGTMALVVVLSVFNGMEELNKQIFRTF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ I K + + +L V+ ++ + + V ++G+ N+
Sbjct: 61 EADMTIAPKQGKRFLATPALKKRLQKIPGVNLLTTVAQDNALARYGNAQTVVRLKGVDNN 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
Q + G + I+ + +L +S D + L + +
Sbjct: 121 YLQRQQLDSALLEGKLLLQRQGVNYAIVADGVRSDLSVSPIDILTPLEILYPQSGQSFSV 180
Query: 185 RSKSYTVLGMFRMRFPDYD----NGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEK 239
+ F + + + V + AQ F + V+ +E+ ++
Sbjct: 181 LNPDAFNREAFTVSGVFFIESKYDNFVLAPITSAQTLFGYQPDEVTSLEIQLRPGTNEVD 240
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + +G+ ++V +
Sbjct: 241 VKQALQDAVGDKLIVQSRDDLNVDLYRAI 269
>gi|254514454|ref|ZP_05126515.1| ABC-type transport system, involved in lipoprotein release,
permease component [gamma proteobacterium NOR5-3]
gi|219676697|gb|EED33062.1| ABC-type transport system, involved in lipoprotein release,
permease component [gamma proteobacterium NOR5-3]
Length = 405
Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 54/261 (20%), Positives = 99/261 (37%), Gaps = 11/261 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A RY + + + +S G+++G L+ V+SVMNGF +M +R+L + H
Sbjct: 7 LRIALRYTLAFGRGHLSVFMAGVSMTGLILGTALLLTVLSVMNGFEREMRERILALVPHA 66
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + RL+ +P V V FVS + + S +
Sbjct: 67 TVHTPASFDI-NDGFVERLESLPQVASVSQFVSFDGMAIRGRDVVAISGLGLASMVQVTP 125
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
D + GV++G +A LG+ GD I I+ P + +
Sbjct: 126 AMAEL--------ADLNDLSGVVLGDSVAARLGVEAGDNITIIVPARGRDRRTDIVTQR- 176
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ + D + MSL +A L VSG+++ DP ++ + R L
Sbjct: 177 -LNVVSLVDTGTELDESLALMSLTQASALAGLGGGVSGLQLRYDDPFEVDSLLPQLRREL 235
Query: 249 GNGVVVIDWQQRYQIFFSCYE 269
G W+ + ++ +
Sbjct: 236 VPGSYATTWRMTHGNLYAAIQ 256
>gi|317182098|dbj|BAJ59882.1| lipoprotein release system transmembrane protein [Helicobacter
pylori F57]
Length = 410
Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 62/267 (23%), Positives = 109/267 (40%), Gaps = 2/267 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ RYL ++ FISI + ++F GV +GVM LIV M++MNG ++ K++ +
Sbjct: 4 RSLIFFLIKRYLRFDKSQPFISITALLAFFGVAVGVMVLIVAMAIMNGMSKEFEKKLFVM 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N + + + + + P+++ + S S G V S
Sbjct: 64 NYPLTLYTTSPYGISEEVVQALEKKFPNLLFSPYLQTQSLIKSAHSMNGGVVFGVDFSKE 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + N ++ F +I+GK L +L + + K ++ + T + +
Sbjct: 124 RRINEVLNDALKNTNENDLFKNPFNLIVGKSLRYSLNLDLNQKADLFFTELEPTGLTLSP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDP-DAIEKTHE 242
K +T+ G F YD +Y SLQ L G+ V+ K P IE
Sbjct: 184 IMKRFTIKGDFDSGLKSYDMSYMYSSLQAISAIRRLPLGLYDGVHVYSKTPMKDIENLRN 243
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I +G+ + W Q+ FFS E
Sbjct: 244 ALKTINHHGIGIEGWWQQNGNFFSAME 270
>gi|308182944|ref|YP_003927071.1| hypothetical protein HPPC_03975 [Helicobacter pylori PeCan4]
gi|308065129|gb|ADO07021.1| hypothetical protein HPPC_03975 [Helicobacter pylori PeCan4]
Length = 410
Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 61/267 (22%), Positives = 108/267 (40%), Gaps = 2/267 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ RYL ++ FISI + ++F GV +GVM LIV M++MNG ++ K++ +
Sbjct: 4 RSLIFFLIKRYLRFDKSQPFISITALLAFFGVAVGVMVLIVAMAIMNGMSKEFEKKLFVM 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N + + + + + P+++ + S S G V S
Sbjct: 64 NYPLTLYTTSPYGISEEVVQALEKKFPNLLFSPYLQTQSLIKSAHSMNGGVVFGVDFSKE 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + N ++ F +I+GK L +L + + K ++ + T + +
Sbjct: 124 RRINEVLNDALKNTNENDLFKNPFNLIVGKSLRYSLNLDLNQKADLFFTELEPTGLTLSP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDP-DAIEKTHE 242
K + + G F YD +Y SLQ L G+ V+ K P IE
Sbjct: 184 IMKRFIIKGDFDSGLKSYDMSYMYTSLQAISAIRRLPLGLYDGVHVYSKTPMKDIEILRN 243
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I +G+ + W Q+ FFS E
Sbjct: 244 ALKTINHHGIGIEGWWQQNGNFFSAME 270
>gi|329123563|ref|ZP_08252125.1| lipoprotein ABC superfamily ATP binding cassette transporter,
permease protein [Haemophilus aegyptius ATCC 11116]
gi|327470305|gb|EGF15765.1| lipoprotein ABC superfamily ATP binding cassette transporter,
permease protein [Haemophilus aegyptius ATCC 11116]
Length = 416
Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 55/266 (20%), Positives = 115/266 (43%), Gaps = 5/266 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY +KN +++ + S IG+ +GV LIV +S MNGF ++ +R+L + H
Sbjct: 4 PFFISWRYQRGKQKNPLVALIAKFSAIGIALGVAVLIVGLSAMNGFERELNQRILAVVPH 63
Query: 68 VV----IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ Q+K + +Q + RL P + + PFVS A V S V V+G+
Sbjct: 64 IEIFSAPQEKDPTIHHWQNLEKRLQQNPQIKGISPFVSFTALVENG-SKLKVVQVKGVKK 122
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + N F++ G+++G +A+ L + +GD I +L +
Sbjct: 123 QAEDKVSSIGNFVQEQGWNKFEKEGGLVLGAGIAKELDVKVGDWITLLISQQNGDEQFAQ 182
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ V + R+ + + Q + ++G+E+ + DP ++ +
Sbjct: 183 PIREPVQVTAILRLDGQLDYSYALLPLAQAQTFLTYQPDQITGVELKLDDPFSVRNLDLS 242
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + +W ++ + +
Sbjct: 243 MFNDYPQMLYMQNWISKFGYMYRDIQ 268
>gi|317014197|gb|ADU81633.1| lipoprotein release system transmembrane protein [Helicobacter
pylori Gambia94/24]
Length = 410
Score = 103 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 62/267 (23%), Positives = 109/267 (40%), Gaps = 2/267 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ RYL ++ FISI + ++F GV +GVM LIV M++MNG ++ K++ +
Sbjct: 4 RSLIFFLIKRYLRFDKSQPFISITALLAFFGVAVGVMVLIVAMAIMNGMSKEFEKKLFVM 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N + + + + + P+++ + S S G V S
Sbjct: 64 NYPLTLYTTSPYGISEEVVQALEKKFPNLLFSPYLQTQSLIKSAHSMNGGVVFGVDFSKE 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + N ++ F +I+GK L +L + + K ++ + T + +
Sbjct: 124 KRINEVLNDALKNINENDLFKNPFNLIVGKSLRYSLNLDLNQKADLFFTELEPTGLTLSP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDP-DAIEKTHE 242
K +T+ G F YD +Y SLQ L G+ V+ K P IE
Sbjct: 184 IMKRFTIKGDFDSGLKSYDMSYMYASLQAISAIRRLPLGLYDGVHVYSKTPMKDIENLRN 243
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I +G+ + W Q+ FFS E
Sbjct: 244 ALKTINHHGIGIEGWWQQNGNFFSAME 270
>gi|189459726|ref|ZP_03008511.1| hypothetical protein BACCOP_00354 [Bacteroides coprocola DSM 17136]
gi|189433573|gb|EDV02558.1| hypothetical protein BACCOP_00354 [Bacteroides coprocola DSM 17136]
Length = 409
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 47/273 (17%), Positives = 93/273 (34%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RYLFS + + I++ S IS GV + +AL+ +SV NGF++ +
Sbjct: 1 MNFPFYIARRYLFSKKSHNAINVISAISVCGVALATLALVCTLSVFNGFQDLVTTFFTAF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + I + D Q ++V + + +V+G+ ++
Sbjct: 61 DSQLKITAVRGKVFDGQDKRVLQLKKMPDVEVYSESLEDNVMVQYQGRQAMAVVKGVEDN 120
Query: 125 DFSYLQNSFSRFYGNVSNDF-----DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
F G+ + L + +I V
Sbjct: 121 FDQLTPIDSILFGRGDLLLHDEVVDYAIPGIQLLSTLGSGIRFLDPLEIYAPRRGAKVNM 180
Query: 180 MGMGIRS---KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
++ +F + YD + S+ A+ F VS I + +K
Sbjct: 181 ANPSTAFVTGNLFSSGLVFAVNQEKYDASYILTSIDFARRLFQYTTEVSAINLKLKAGAD 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ ++I +LG+ +V D ++ + E
Sbjct: 241 TDAVKKHIQDLLGDDFLVQDRYEQQADTYRIME 273
>gi|170717662|ref|YP_001784739.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Haemophilus somnus 2336]
gi|168825791|gb|ACA31162.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Haemophilus somnus 2336]
Length = 396
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 52/268 (19%), Positives = 104/268 (38%), Gaps = 11/268 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +A RY + + F + + ++ +G+++GVMALI+V+SVMNG + ++VL
Sbjct: 1 MTFPISLFIALRYWRAKSADHFGQLVTTLATVGIILGVMALIIVLSVMNGLEKYQKQQVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H ++ K + + V KV+P + +G ++
Sbjct: 61 SNIPHSILMPKNNSIYLIASQPDMP---DFVQKVVPINTTSVVFQTAQGVSAGQILGVQK 117
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
SD L + +IIG LA+ L + IGDK+ ++
Sbjct: 118 FSDDPLLSEFSENHFS--QLLPIGEFKLIIGWKLAQKLNVQIGDKVRVMVTENSQYTPFG 175
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFN-LENAVSGIEVFVKDPDAIEKTH 241
+ + + F + + V+ +L + V G +F++DP I +
Sbjct: 176 RVPVQRLFTISDIYSSFSEQASYAVFANLADIGRLMRIKPEQVQGYRLFLQDPFFISE-- 233
Query: 242 ENIVRILG-NGVVVIDWQQRYQIFFSCY 268
+ + ++DW+ + FF
Sbjct: 234 --LPKFFPTEQWKIVDWRSQKGEFFQAV 259
>gi|317009203|gb|ADU79783.1| lipoprotein release system transmembrane protein [Helicobacter
pylori India7]
Length = 410
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 62/267 (23%), Positives = 109/267 (40%), Gaps = 2/267 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ RYL ++ FISI + ++F GV +GVM LIV M++MNG ++ K++ +
Sbjct: 4 RSLIFFLIKRYLRFDKSQPFISITALLAFFGVAVGVMVLIVAMAIMNGMSKEFEKKLFVM 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N + + + + + P+++ + S S G V S
Sbjct: 64 NYPLTLYTTSPYGISEEVVQALEKKFPNLLFSPYLQTQSLIKSVHSMNGGVVFGVDFSKE 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + N ++ F +I+GK L +L + + K ++ + T + +
Sbjct: 124 RRINEVLNDALKNTNENDLFKNPFNLIVGKSLRYSLNLDLNQKADLFFTELEPTGLTLSP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDP-DAIEKTHE 242
K +T+ G F YD +Y SLQ L G+ V+ K P IE
Sbjct: 184 IMKRFTIKGDFDSGLKSYDMSYMYTSLQAISAIRRLPLGLYDGVHVYSKTPMKDIEILRN 243
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I +G+ + W Q+ FFS E
Sbjct: 244 ALKTINHHGISIEGWWQQNGNFFSAME 270
>gi|77360333|ref|YP_339908.1| lipoprotein releasing system transmembrane protein
[Pseudoalteromonas haloplanktis TAC125]
gi|76875244|emb|CAI86465.1| putative lipoprotein releasing system transmembrane protein
[Pseudoalteromonas haloplanktis TAC125]
Length = 414
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 50/268 (18%), Positives = 105/268 (39%), Gaps = 7/268 (2%)
Query: 7 FEVIVAWRY--LFSNR--KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ R+ ++ KN F+S + S +G+++GV LIV +SV+NGF + ++ R+L
Sbjct: 3 LSAFISKRFRAYSGHKDEKNGFVSFIAKASTVGILLGVAVLIVALSVINGFEQQLVHRLL 62
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ V P+ ++ +L V PF++ S + +
Sbjct: 63 SVVPQVEYVAPNRPIANWPQKVEQLQQQDHVTGAAPFIAVNGMAQFKSQLKAVEIRGVEP 122
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ ++F VI+GK + L S+GD I +L P +
Sbjct: 123 S--LEGSVSAINQFTKGKLVSQLGIDEVILGKQIVNQLDASVGDSITLLIPQIAQQGQSL 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
+ +L D+ ++ L +AQ E+ V+G+ + V D +
Sbjct: 181 LAPKRVTLLLAGIVEMGGPIDSTAAFIHLNKAQQTLGYDESQVTGLRLSVDDVFTAHQIA 240
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + + V + W + + +
Sbjct: 241 LRVGQTIDDYVYISSWFRTQGSLYQDIQ 268
>gi|317178853|dbj|BAJ56641.1| lipoprotein release system transmembrane protein [Helicobacter
pylori F30]
Length = 410
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 62/267 (23%), Positives = 109/267 (40%), Gaps = 2/267 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ RYL ++ FISI + ++F GV +GVM LIV M++MNG ++ K++ +
Sbjct: 4 RSLIFFLIKRYLRFDKSQPFISITALLAFFGVAVGVMVLIVAMAIMNGMSKEFEKKLFVM 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N + + + + + P+++ + S S G V S
Sbjct: 64 NYPLTLYTTSPYGISEEVVQALEKKFPNLLFSPYLQTQSLIKSAHSMNGGVVFGVDFSKE 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + N ++ F +I+GK L +L + + K ++ + T + +
Sbjct: 124 RRINEVLNDALKNTNENDLFKNPFNLIVGKSLRYSLNLDLNQKADLFFTELEPTGLTLSP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDP-DAIEKTHE 242
K +T+ G F YD +Y SLQ L G+ V+ K P IE
Sbjct: 184 IMKRFTIKGDFDSGLKSYDMSYMYSSLQAISAIRRLPLGLYDGVHVYSKTPMKDIEILRN 243
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I +G+ + W Q+ FFS E
Sbjct: 244 ALKTINHHGIGIEGWWQQNGNFFSAME 270
>gi|15645406|ref|NP_207580.1| hypothetical protein HP0787 [Helicobacter pylori 26695]
gi|2313911|gb|AAD07831.1| conserved hypothetical integral membrane protein [Helicobacter
pylori 26695]
Length = 410
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 61/267 (22%), Positives = 108/267 (40%), Gaps = 2/267 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ RYL ++ FISI + ++F GV +GVM LIV M++MNG ++ K++ +
Sbjct: 4 RSLIFFLIKRYLRFDKSQPFISITALLAFFGVAVGVMVLIVAMAIMNGMSKEFEKKLFVM 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N + + + + + P+++ + S S G V S
Sbjct: 64 NYPLTLYTTSPYGISEEVVQALEKKFPNLLFSPYLQTQSLIKSAHSMNGGVVFGVDFSKE 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + N ++ F +I+GK L +L + + K ++ + T + +
Sbjct: 124 KRINEVLNDALKNINENDLFKNPFNLIVGKSLRYSLNLDLNQKADLFFTELEPTGLTLSP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDP-DAIEKTHE 242
K +T+ G F YD +Y LQ L G+ V+ K P IE
Sbjct: 184 IMKRFTIKGDFDSGLKSYDMSYMYAGLQAISAIRRLPLGLYDGVHVYSKTPMKDIEILRN 243
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I +G+ + W Q+ FFS E
Sbjct: 244 ALKTINHHGIGIEGWWQQNGNFFSAME 270
>gi|317012598|gb|ADU83206.1| hypothetical protein HPLT_03970 [Helicobacter pylori Lithuania75]
Length = 410
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 62/267 (23%), Positives = 109/267 (40%), Gaps = 2/267 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ RYL ++ FISI + ++F GV +GVM LIV M++MNG ++ K++ +
Sbjct: 4 RSLIFFLIKRYLRFDKSQPFISITALLAFFGVAVGVMVLIVAMAIMNGMSKEFEKKLFVM 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N + + + + + P+++ + S S G V S
Sbjct: 64 NYPLTLYTTSPYGISEEVVQALEKKFPNLLFSPYLQTQSLIKSAHSMNGGVVFGVDFSKE 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + N ++ F +I+GK L +L + + K ++ + T + +
Sbjct: 124 RRINEVLNDALKNTNTNDLFKNPFNLIVGKSLRYSLNLDLNQKADLFFTELEPTGLTLSP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDP-DAIEKTHE 242
K +T+ G F YD +Y SLQ L G+ V+ K P IE
Sbjct: 184 IMKRFTIKGDFDSGLKSYDMSYMYASLQAISAIRRLPLGLYDGVHVYSKTPMKDIEILRN 243
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I +G+ + W Q+ FFS E
Sbjct: 244 ALKTINHHGIGIEGWWQQNGNFFSAME 270
>gi|188026125|ref|ZP_02960959.2| hypothetical protein PROSTU_02945 [Providencia stuartii ATCC 25827]
gi|188021713|gb|EDU59753.1| hypothetical protein PROSTU_02945 [Providencia stuartii ATCC 25827]
Length = 393
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 53/246 (21%), Positives = 107/246 (43%), Gaps = 1/246 (0%)
Query: 24 FISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFI 83
+S+ S +S +G+++GV LI+ +S MNGF ++ RVL + H I P D+Q+
Sbjct: 1 MVSLVSIVSTLGIVLGVAVLIIGLSAMNGFERELENRVLSVVPHGQIYAVKAPYQDWQYA 60
Query: 84 ANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSND 143
N + P V V P+V + ++ + ++ ++ +
Sbjct: 61 ENVIRNTPGVKAVSPYVGFTGLLERGANLKAIQVMGVSPKTESEVSALPKFVLDDAWKDF 120
Query: 144 FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYD 203
+ +I+G+ +A +L + +GD + I+ P D + + V G+FR D
Sbjct: 121 KAGKQSIILGQGVADSLNVKVGDWVTIMIPNTDASLKIQQPKRIRVQVSGVFR-LSGLLD 179
Query: 204 NGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQI 263
+ + + + +AQ Y + ++G E+ +P +K + + VVV W Y
Sbjct: 180 HQLALIPIADAQAYLGYGDGITGFEIKADNPFNADKVVYDAGLKTMHHVVVKSWIGDYGY 239
Query: 264 FFSCYE 269
++ +
Sbjct: 240 MYNDIQ 245
>gi|261837981|gb|ACX97747.1| transmembrane protein [Helicobacter pylori 51]
Length = 410
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 62/267 (23%), Positives = 109/267 (40%), Gaps = 2/267 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ RYL ++ FISI + ++F GV +GVM LIV M++MNG ++ K++ +
Sbjct: 4 RSLIFFLIKRYLRFDKSQPFISITALLAFFGVAVGVMVLIVAMAIMNGMSKEFEKKLFVM 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N + + + + + P+++ + S S G V S
Sbjct: 64 NYPLTLYTTSPYGISEEVVQALEKKFPNLLFSPYLQTQSLIKSAHSMNGGVVFGVDFSKE 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + N ++ F +I+GK L +L + + K ++ + T + +
Sbjct: 124 RRINEVLNDALKNTNENDLFKNPFNLIVGKSLRYSLNLDLNQKADLFFTELEPTGLTLSP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDP-DAIEKTHE 242
K +T+ G F YD +Y SLQ L G+ V+ K P IE
Sbjct: 184 IMKRFTIKGDFDSGLKSYDMSYMYSSLQAISAIRRLPLGLYDGVHVYSKTPMKDIENLRN 243
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I +G+ + W Q+ FFS E
Sbjct: 244 ALKTINHHGIGIEGWWQQNGNFFSAME 270
>gi|317177382|dbj|BAJ55171.1| lipoprotein release system transmembrane protein [Helicobacter
pylori F16]
Length = 428
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 62/267 (23%), Positives = 109/267 (40%), Gaps = 2/267 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ RYL ++ FISI + ++F GV +GVM LIV M++MNG ++ K++ +
Sbjct: 22 RSLIFFLIKRYLRFDKSQPFISITALLAFFGVAVGVMVLIVAMAIMNGMSKEFEKKLFVM 81
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N + + + + + P+++ + S S G V S
Sbjct: 82 NYPLTLYTTSPYGISEEVVQALEKKFPNLLFSPYLQTQSLIKSAHSMNGGVVFGVDFSKE 141
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + N ++ F +I+GK L +L + + K ++ + T + +
Sbjct: 142 RRINEVLNDALKNTNENDLFKNPFNLIVGKSLRYSLNLDLNQKADLFFTELEPTGLTLSP 201
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDP-DAIEKTHE 242
K +T+ G F YD +Y SLQ L G+ V+ K P IE
Sbjct: 202 IMKRFTIKGDFDSGLKSYDMSYMYSSLQAISAIRRLPLGLYDGVHVYSKTPMKDIENLRN 261
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I +G+ + W Q+ FFS E
Sbjct: 262 ALKTINHHGIGIEGWWQQNGNFFSAME 288
>gi|188527368|ref|YP_001910055.1| lipoprotein release system transmembrane protein [Helicobacter
pylori Shi470]
gi|188143608|gb|ACD48025.1| lipoprotein release system transmembrane protein [Helicobacter
pylori Shi470]
Length = 428
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 62/267 (23%), Positives = 109/267 (40%), Gaps = 2/267 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ RYL ++ FISI + ++F GV +GVM LIV M++MNG ++ K++ +
Sbjct: 22 RSLIFFLIKRYLRFDKSQPFISITALLAFFGVAVGVMVLIVAMAIMNGMSKEFEKKLFVM 81
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N + + + + + P+++ + S S G V S
Sbjct: 82 NYPLTLYTTSPYGISEEVVQALEKKFPNLLFSPYLQTQSLIKSAHSMNGGVVFGVDFSKE 141
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + N ++ F +I+GK L +L + + K ++ + T + +
Sbjct: 142 RRINEVLNDALKNTNENDLFKNPFNLIVGKSLRYSLNLDLNQKADLFFTELEPTGLTLSP 201
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDP-DAIEKTHE 242
K +T+ G F YD +Y SLQ L G+ V+ K P IE
Sbjct: 202 IMKRFTIKGDFDSGLKSYDMSYMYSSLQAISAIRRLPLGLYDGVHVYSKTPMKDIENLRN 261
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I +G+ + W Q+ FFS E
Sbjct: 262 ALKTINHHGIGIEGWWQQNGNFFSAME 288
>gi|34557623|ref|NP_907438.1| hypothetical protein WS1259 [Wolinella succinogenes DSM 1740]
gi|34483340|emb|CAE10338.1| conserved hypothetical protein [Wolinella succinogenes]
Length = 403
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 60/270 (22%), Positives = 109/270 (40%), Gaps = 8/270 (2%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + + RYL ++ FISIA+ ++F GV IGVM LIV M++MNGF +D ++
Sbjct: 1 MKQETALIPYLTKRYLRFDKSQPFISIAAILAFAGVAIGVMVLIVAMAIMNGFDKDFERK 60
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ +N + + K + + L + L F + SG +
Sbjct: 61 LFTMNYPLTLYPKVSQGISEEL----LKELESSFPHLLFSPYLRTQAISKSGDAMEGAVV 116
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
Q + ++ +++G +L ++ K+ ++ + T +
Sbjct: 117 FGVDFEREKQINEVIAEALKESEISGRFDILVGSELRNEFFLARDSKLMLIFTQLEPTGL 176
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEK 239
+ K + V G FR YD G ++ SL+ + E GI VF K+P
Sbjct: 177 SLSPTMKRFDVKGFFRSGLTAYDKGYIFASLEAIRAIKKKEEGYYDGIHVFAKEPMKE-- 234
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
++I L ++ W Q+ FF+ +
Sbjct: 235 -IDSIRAKLPLEAGIVGWWQQNGNFFAALQ 263
>gi|298736490|ref|YP_003729016.1| hypothetical protein HPB8_995 [Helicobacter pylori B8]
gi|298355680|emb|CBI66552.1| conserved hypothetical protein [Helicobacter pylori B8]
Length = 410
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 61/267 (22%), Positives = 109/267 (40%), Gaps = 2/267 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ RYL ++ FISI + ++F GV +GVM LIV M++MNG ++ K++ +
Sbjct: 4 RSLIFFLIKRYLRFDKSQPFISITALLAFFGVAVGVMVLIVAMAIMNGMSKEFEKKLFVM 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N + + + + + + P+++ + S S G V S
Sbjct: 64 NYPLTLYTISPYGISEEVVQDLEKKFPNLLFSPYLQTQSLIKSAHSMNGGVVFGVDFSKE 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + N ++ +I+GK L +L + + K ++ + T + +
Sbjct: 124 RRINGVLNDALKNTNENDLSKNPFNLIVGKSLRYSLNLDLNQKADLFFTELEPTGLTLSP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDP-DAIEKTHE 242
K +T+ G F YD +Y SLQ L G+ V+ K P IE
Sbjct: 184 IMKRFTIKGDFDSGLKSYDMSYMYASLQAISAIRRLPLGLYDGVHVYSKTPMKDIEILRN 243
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I +G+ + W Q+ FFS E
Sbjct: 244 ALKTINHHGIGIEGWWQQNGNFFSAME 270
>gi|254779241|ref|YP_003057346.1| ABC-type transport system, permease; putative lipoprotein release
system transmembrane protein LolC; putative membrane
protein; putative signal peptide [Helicobacter pylori
B38]
gi|254001152|emb|CAX29111.1| ABC-type transport system, permease; putative lipoprotein release
system transmembrane protein LolC; putative membrane
protein; putative signal peptide [Helicobacter pylori
B38]
Length = 410
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 62/267 (23%), Positives = 109/267 (40%), Gaps = 2/267 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ RYL ++ FISI + ++F GV +GVM LIV M++MNG ++ K++ +
Sbjct: 4 RSLIFFLIKRYLRFDKSQPFISITALLAFFGVAVGVMVLIVAMAIMNGMSKEFEKKLFVM 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N + + + + + P+++ + S S G V S
Sbjct: 64 NYPLTLYTTSPYGISEEVVQALEKKFPNLLFSPYLQTQSLIKSAHSMNGGVVFGVDFSKE 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + N ++ F +I+GK L +L + + K ++ + T + +
Sbjct: 124 RRINGVLNDALKNINENDLFKNPFNLIVGKSLRYSLNLDLNQKADLFFTELEPTGLTLSP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDP-DAIEKTHE 242
K +T+ G F YD +Y SLQ L G+ V+ K P IE
Sbjct: 184 IMKRFTIKGDFDSGLKSYDMSYMYASLQAISAIRRLPLGLYDGVHVYSKTPMKDIEILRN 243
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I +G+ + W Q+ FFS E
Sbjct: 244 ALKTINHHGIGIEGWWQQNGNFFSAME 270
>gi|157146177|ref|YP_001453496.1| outer membrane-specific lipoprotein transporter subunit LolE
[Citrobacter koseri ATCC BAA-895]
gi|157083382|gb|ABV13060.1| hypothetical protein CKO_01933 [Citrobacter koseri ATCC BAA-895]
Length = 393
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 50/246 (20%), Positives = 99/246 (40%), Gaps = 1/246 (0%)
Query: 24 FISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFI 83
+S+ S IS IG+ +GV LIV +S MNGF ++ R+L + H I+ P ++
Sbjct: 1 MVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVNQPWTHWREA 60
Query: 84 ANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSND 143
++ + + P+++ V ++ + + + N
Sbjct: 61 LEKVQHVQGIAAAAPYINFTGLVESGANLRAIQVKGVDPKQEQRLSALPSFVQNHAWDNF 120
Query: 144 FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYD 203
+ +IIGK +A L + GD ++I+ P + V G+ + D
Sbjct: 121 RAGEQQIIIGKGVADALKVKQGDWVSIMIPNASADHKLQQPKRVRLHVTGILQ-LSGQLD 179
Query: 204 NGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQI 263
+ + +++AQ Y ++ +VSGI + V D K + + + V + W Y
Sbjct: 180 HSFAMIPMEDAQQYLDMGASVSGIAIKVNDVFNANKLVRDAGEVTDSYVYIKSWIGTYGY 239
Query: 264 FFSCYE 269
+ +
Sbjct: 240 MYHDIQ 245
>gi|315638244|ref|ZP_07893426.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Campylobacter upsaliensis JV21]
gi|315481780|gb|EFU72402.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Campylobacter upsaliensis JV21]
Length = 395
Score = 102 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 53/261 (20%), Positives = 117/261 (44%), Gaps = 8/261 (3%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ ++YL +++ FI+++ ++F+GV +G+ L+V M++MNGF ++ KR +N +
Sbjct: 3 RYLLFKYLRFDKEQPFINLSMLLAFLGVCVGLCVLLVAMAIMNGFDKEFQKRFFVMNYPI 62
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
I K+Y VD +F+A P ++ G ++ + G +V G++ +
Sbjct: 63 TILPKFYAPVDDEFVAELRREFPHLLF--SPYLGTQVIAKGDNRFEGGVVFGVNFEEEKK 120
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ + + ++IG+ LA + DK++++ + + + +K
Sbjct: 121 INEVVKNAIKDTNLSSYD---IVIGEILAEEFRLKKNDKLSLIFSNLNPSGFSLTPTTKR 177
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ V F YD +Y+ + + ++ G+ ++ ++ + E + L
Sbjct: 178 FDVKAKFNSGLIFYDKAYMYVKAEALRKVLGVKEGYDGVHIYSENAF---EDIEKLRAYL 234
Query: 249 GNGVVVIDWQQRYQIFFSCYE 269
G I W ++ Q FFS E
Sbjct: 235 GQDYAAIGWWEQNQNFFSALE 255
>gi|108563198|ref|YP_627514.1| hypothetical protein HPAG1_0773 [Helicobacter pylori HPAG1]
gi|107836971|gb|ABF84840.1| lipoprotein release system transmembrane protein [Helicobacter
pylori HPAG1]
Length = 410
Score = 102 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 62/267 (23%), Positives = 109/267 (40%), Gaps = 2/267 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ RYL ++ FISI + ++F GV +GVM LIV M++MNG ++ K++ +
Sbjct: 4 RSLIFFLIKRYLRFDKSQPFISITALLAFFGVAVGVMVLIVAMAIMNGMSKEFEKKLFVM 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N + + + + + P+++ + S S G V S
Sbjct: 64 NYPLTLYTTSPYGISEEVVQALEKKFPNLLFSPYLQTQSLIKSAHSMNGGVVFGVDFSKE 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + N ++ F +I+GK L +L + + K ++ + T + +
Sbjct: 124 RRINEVLNDALKNTNTNDLFKNPFNLIVGKSLRYSLNLDLNQKADLFFTELEPTGLTLSP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDP-DAIEKTHE 242
K +T+ G F YD +Y SLQ L G+ V+ K P IE
Sbjct: 184 IMKRFTIKGDFDSGLKSYDMSYMYASLQAISAIRRLPLGLYDGVHVYSKTPMKDIEILRN 243
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I +G+ + W Q+ FFS E
Sbjct: 244 ALKTINHHGIGIEGWWQQNGNFFSAME 270
>gi|304397243|ref|ZP_07379122.1| lipoprotein releasing system, transmembrane protein LolE [Pantoea
sp. aB]
gi|304355392|gb|EFM19760.1| lipoprotein releasing system, transmembrane protein LolE [Pantoea
sp. aB]
Length = 414
Score = 102 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 52/256 (20%), Positives = 103/256 (40%), Gaps = 1/256 (0%)
Query: 14 RYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQK 73
R+ R+ +S+ S IS IG+ +GV LI+ +S MNGF ++ R+L + H I+
Sbjct: 12 RFSRGRRRGGMVSLISVISTIGIALGVAVLIIGLSAMNGFERELNNRILAVVPHGEIEAV 71
Query: 74 YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSF 133
P +Q + ++ +P + P+V+ + + + + +
Sbjct: 72 NQPFQHWQSMIAPIEKVPGIAAAAPYVNFTGLIESGARLEALQVKGVDPAQEPRLSALPQ 131
Query: 134 SRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLG 193
S + +I+G +A++L + GD I I+ P D + + +
Sbjct: 132 FVANNAWSTFAAGKQQIILGGGIAKSLNVKQGDWITIMIPNNDGDNK-LLQPKRIRLQVS 190
Query: 194 MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVV 253
D+ + + L +AQ Y + ++VSGI + + DP K + + V
Sbjct: 191 GILQLSGMLDHSLALVPLADAQHYLEMGDSVSGIALKMTDPFQAVKLVRDAGEATRSYVY 250
Query: 254 VIDWQQRYQIFFSCYE 269
+ W Y + +
Sbjct: 251 IKSWIGTYGYMYRDIQ 266
>gi|157737554|ref|YP_001490237.1| hypothetical protein Abu_1311 [Arcobacter butzleri RM4018]
gi|157699408|gb|ABV67568.1| conserved hypothetical integral membrane protein [Arcobacter
butzleri RM4018]
Length = 401
Score = 102 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 60/269 (22%), Positives = 115/269 (42%), Gaps = 10/269 (3%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + +YL ++KN FISI++ ++F+GV IGVM LI+ MS+MNG ++ +++
Sbjct: 1 MNKKLVNFIVKKYLRFDKKNPFISISAILAFVGVSIGVMVLILAMSIMNGTAKEFERKLF 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+N + + + Q + +L +K PFVS QA V + G++ S
Sbjct: 61 TMN-YPLTIYPKFADSVNQNLLEKLQKEYPNLKFSPFVSTQAIVQNGDNMSGGIIFGVDS 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + +D G I L ++ G K+ + + +
Sbjct: 120 QKEANINPIYKEAVGDLLLGKYDVITGSGIKDKL----YLNSGSKVTLYFTELNPAGFSL 175
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAV-SGIEVFVKD-PDAIEKT 240
+ K + + F YD +Y SL+ Q ++ + GI + + + IEK
Sbjct: 176 MPKMKRFDYVTSFTSGLNAYDKAYMYTSLEALQTLLQKDSNIYDGIHIHSDNALEDIEKL 235
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ G +I W Q+ FF+ +
Sbjct: 236 KVSLQ---GTNASIIGWWQQNGNFFAAMK 261
>gi|210134988|ref|YP_002301427.1| lipoprotein release system transmembrane protein LolE [Helicobacter
pylori P12]
gi|210132956|gb|ACJ07947.1| lipoprotein release system transmembrane protein LolE [Helicobacter
pylori P12]
Length = 410
Score = 102 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 62/267 (23%), Positives = 109/267 (40%), Gaps = 2/267 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ RYL ++ FISI + ++F GV +GVM LIV M++MNG ++ K++ +
Sbjct: 4 RSLIFFLIKRYLRFDKSQPFISITALLAFFGVAVGVMVLIVAMAIMNGMSKEFEKKLFVM 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N + + + + + P+++ + S S G V S
Sbjct: 64 NYPLTLYTTSPYGISEEVVQALEKKFPNLLFSPYLQTQSLIKSAHSMNGGVVFGVDFSKE 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + N ++ F +I+GK L +L + + K ++ + T + +
Sbjct: 124 RRINGVLNDALKNTNTNDLFKNPFNLIVGKSLRYSLNLDLNQKADLFFTELEPTGLTLSP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDP-DAIEKTHE 242
K +T+ G F YD +Y SLQ L G+ V+ K P IE
Sbjct: 184 IMKRFTIKGDFDSGLKSYDMSYMYASLQAISAIRRLPLGLYDGVHVYSKTPMKDIEILRN 243
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I +G+ + W Q+ FFS E
Sbjct: 244 ALKTINHHGIGIEGWWQQNGNFFSAME 270
>gi|315637337|ref|ZP_07892555.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Arcobacter butzleri JV22]
gi|315478380|gb|EFU69095.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Arcobacter butzleri JV22]
Length = 401
Score = 102 bits (252), Expect = 8e-20, Method: Composition-based stats.
Identities = 60/269 (22%), Positives = 115/269 (42%), Gaps = 10/269 (3%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + +YL ++KN FISI++ ++F+GV IGVM LI+ MS+MNG ++ +++
Sbjct: 1 MNKKLVNFIVKKYLRFDKKNPFISISAILAFVGVSIGVMVLILAMSIMNGTAKEFERKLF 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+N + + + Q + +L +K PFVS QA V + G++ S
Sbjct: 61 TMN-YPLTIYPKFADSVNQNLLEKLQKEYPNLKFSPFVSTQAIVQNGDNMSGGIIFGVDS 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + +D G I L ++ G K+ + + +
Sbjct: 120 QKEANINPIYKEAVGDLLLGKYDVITGSGIKDKL----YLNSGSKVTLYFTELNPAGFSL 175
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAV-SGIEVFVKD-PDAIEKT 240
+ K + + F YD +Y SL+ Q ++ + GI + + + IEK
Sbjct: 176 MPKMKRFDYVTSFTSGLNAYDKAYMYTSLEALQTLLQKDSNIYDGIHIHSDNALEDIEKL 235
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ G +I W Q+ FF+ +
Sbjct: 236 KISLQ---GTNASIIGWWQQNGNFFAAMK 261
>gi|109947456|ref|YP_664684.1| putative integral membrane protein [Helicobacter acinonychis str.
Sheeba]
gi|109714677|emb|CAJ99685.1| putative integral membrane protein [Helicobacter acinonychis str.
Sheeba]
Length = 410
Score = 102 bits (252), Expect = 8e-20, Method: Composition-based stats.
Identities = 58/267 (21%), Positives = 105/267 (39%), Gaps = 2/267 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ RYL ++ FISI + ++F GV +GVM LIV M++MNG ++ K++ +
Sbjct: 4 RSLIFFLIKRYLRFDKSQPFISITALLAFFGVAVGVMVLIVAMAIMNGMSKEFEKKLFVM 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N + + + + P+++ + S S G V S
Sbjct: 64 NYPLTLYTTSPYGISEGVVQILEKEFPNLLFSPYLQTQSLIKSVHSMNGGVVFGVDFSKE 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + + + +I+GK L +L + + K ++ + T + +
Sbjct: 124 RRINAVLNDALKNIDEKDLIKNPFSLIVGKSLRYSLNLDLNQKADLFFTELEPTGLTLSP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDP-DAIEKTHE 242
K + + G F YD +Y SLQ L G+ V+ K P IE
Sbjct: 184 IMKRFIIKGDFDSGLRSYDMSYMYASLQAVSAIRRLPLGLYDGVHVYSKTPMKDIENLRN 243
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I +G+ + W Q+ FFS +
Sbjct: 244 ALKTINHHGIGIEGWWQQNGNFFSAMQ 270
>gi|88608320|ref|YP_506036.1| putative permease [Neorickettsia sennetsu str. Miyayama]
gi|88600489|gb|ABD45957.1| putative permease [Neorickettsia sennetsu str. Miyayama]
Length = 407
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 71/268 (26%), Positives = 122/268 (45%), Gaps = 8/268 (2%)
Query: 3 IFS-RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+F + E+ +A+ YL S +F + +F+S IGV IGV +LIVV SVM+GF+ ++I +
Sbjct: 1 MFVIKLELELAFSYLISK---SFRGLVTFLSLIGVAIGVASLIVVTSVMDGFKAELISNI 57
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+G++GH V + + + + V V + +S+ + V V
Sbjct: 58 VGMSGH-VNIWFQRSTNENEDVMRLRSLATGMPHVAKVVPALEARAIISNELTNVGVLVR 116
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ + S D G++IG +A+ LG+++GD++ LS T +G
Sbjct: 117 GMELNDFERESLVTEKIIQGKVADFEDGIVIGTRMAKELGVNVGDEVRFLSASYTNTILG 176
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
R K V +F + +YD+ +VYM A +F E + I ++ DP
Sbjct: 177 PIPRMKHLKVAAIFALGLVEYDSTLVYMPFNIASTFFRSEMNTASI--YLDDPYFASDVS 234
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
E I L N + V +WQ +F +
Sbjct: 235 ERIKEKLPN-LHVTNWQDVGNPYFRALK 261
>gi|308063428|gb|ADO05315.1| lipoprotein release system transmembrane protein [Helicobacter
pylori Sat464]
Length = 410
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 62/267 (23%), Positives = 109/267 (40%), Gaps = 2/267 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ RYL ++ FISI + ++F GV +GVM LIV M++MNG ++ K++ +
Sbjct: 4 RSLIFFLIKRYLRFDKSQPFISITALLAFFGVAVGVMVLIVAMAIMNGMSKEFEKKLFVM 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N + + + + + P+++ + S S G V S
Sbjct: 64 NYPLTLYTTSPYGISEEVVQALEKKFPNLLFSPYLQTQSLIKSAHSMNGGVVFGVDFSKE 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + N ++ F +I+GK L +L + + K ++ + T + +
Sbjct: 124 RRINEVLNDALKNTNENDLFKNPFNLIVGKSLRYSLNLDLNQKADLFFTELEPTGLTLSP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDP-DAIEKTHE 242
K +T+ G F YD +Y SLQ L G+ V+ K P IE
Sbjct: 184 IMKRFTIKGDFDSGLKSYDMSYMYSSLQAISAIRRLPLGLYDGVHVYSKTPMKDIENLRN 243
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I +G+ + W Q+ FFS E
Sbjct: 244 ALKTINHHGIGIEGWWQQNGNFFSAME 270
>gi|308062107|gb|ADO03995.1| lipoprotein release system transmembrane protein [Helicobacter
pylori Cuz20]
Length = 410
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 62/267 (23%), Positives = 109/267 (40%), Gaps = 2/267 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ RYL ++ FISI + ++F GV +GVM LIV M++MNG ++ K++ +
Sbjct: 4 RSLIFFLIRRYLRFDKSQPFISITALLAFFGVAVGVMVLIVAMAIMNGMSKEFEKKLFVM 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N + + + + + P+++ + S S G V S
Sbjct: 64 NYPLTLYTTSPYGISEEVVQALEKKFPNLLFSPYLQTQSLIKSAHSMNGGVVFGVDFSKE 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + N ++ F +I+GK L +L + + K ++ + T + +
Sbjct: 124 RRINEVLNDALKNTNENDLFKNPFNLIVGKSLRYSLNLDLNQKADLFFTELEPTGLTLSP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDP-DAIEKTHE 242
K +T+ G F YD +Y SLQ L G+ V+ K P IE
Sbjct: 184 IMKRFTIKGDFDSGLKSYDMSYMYSSLQAISAIRRLPLGLYDGVHVYSKTPMKDIEILRN 243
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I +G+ + W Q+ FFS E
Sbjct: 244 ALKTINHHGIGIEGWWQQNGNFFSAME 270
>gi|239996502|ref|ZP_04717026.1| ABC transporter integral membrane subunit [Alteromonas macleodii
ATCC 27126]
Length = 408
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/263 (17%), Positives = 86/263 (32%), Gaps = 2/263 (0%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+A R+ + + FIS S S IG+ +G LIV++SVMNGF +++ R+L +
Sbjct: 2 LAFELAQRFRKTRSEQRFISFISMSSTIGIALGCFVLIVLLSVMNGFEKELTSRILSVVP 61
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
H + + + +L + ++ L S G +
Sbjct: 62 HGEL--YSKSESGIENLDAQLYRLSQDSRIASVTPYTGITGMLQSKGELKAISVTGIPVN 119
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
S R F K +I I + +
Sbjct: 120 SVSDKYTERVTSEDWQRFSTQKNGLIVGKGIFASMDLNIGDIVQILIPQTTQDLTFKAPR 179
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ + DN + M L+ A + + GI+ + DP + T +I
Sbjct: 180 SITLSISGVLSVGGELDNQLGLMHLETASEAIGISSKSQGIQFTLIDPFSSYDTMRDIGY 239
Query: 247 ILGNGVVVIDWQQRYQIFFSCYE 269
GV + DW + ++ +
Sbjct: 240 SYPQGVYMSDWTRTQGHLYNDIQ 262
>gi|57242035|ref|ZP_00369975.1| conserved hypothetical integral membrane protein [Campylobacter
upsaliensis RM3195]
gi|57017227|gb|EAL54008.1| conserved hypothetical integral membrane protein [Campylobacter
upsaliensis RM3195]
Length = 397
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 54/265 (20%), Positives = 116/265 (43%), Gaps = 8/265 (3%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ ++YL +++ FI+++ ++F+GV +G+ L+V M++MNGF ++ KR +
Sbjct: 1 MSLTRYLLFKYLRFDKEQPFINLSMLLAFLGVCVGLCVLLVAMAIMNGFDKEFQKRFFVM 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N + I K+Y VD +F+A L + P++S Q + G +V G++
Sbjct: 61 NYPITILPKFYAPVDDEFVA-ELRREFSHLLFSPYLSTQVIAK-GDNRFEGGVVFGVNFE 118
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + + + ++IG LA + DK++++ + + +
Sbjct: 119 EEKKINEVVKDALKDTNLSSYD---ILIGGALAEEFRLKKNDKLSLIFSNLNPSGFSLTP 175
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+K + V F YD +Y+ + + ++ G+ ++ ++ + +
Sbjct: 176 TTKRFDVKAKFNSGLIFYDKAYMYVKAETLRKVLGVKEGYDGVHIYSENAF---EDIAKL 232
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
LG I W ++ Q FFS E
Sbjct: 233 RTYLGQDYAAIGWWEQNQNFFSALE 257
>gi|268315601|ref|YP_003289320.1| hypothetical protein Rmar_0023 [Rhodothermus marinus DSM 4252]
gi|262333135|gb|ACY46932.1| protein of unknown function DUF214 [Rhodothermus marinus DSM 4252]
Length = 418
Score = 101 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 52/271 (19%), Positives = 100/271 (36%), Gaps = 11/271 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH- 67
+++A RYL + + I++ + IS +GV +GV ALIVV+SVMNGF + ++ ++ H
Sbjct: 5 LLLARRYLMARHQVTLIAVITGISVLGVAVGVAALIVVLSVMNGFYRVVRDLLVSVDPHV 64
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
++ L + L +P V +V +V G+A + G +V +
Sbjct: 65 RIVSVAPGGLAVDDSLEQYLRRLPHVTEVTAYVEGKALLLYEGEGEVNKVVIVRGVEPEA 124
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN---------ILSPYGDVT 178
+R +G+V G+ I+ + +
Sbjct: 125 LEAMGAARVFGSVDLQRREGRPGILVGMPLARRLGLLPASSTEPASQVGLLSAPALEQLL 184
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+ + YD V+++L+EA+ F + + V GI + + D
Sbjct: 185 TQPLAPPPLIRFEVRGLYQLTSGYDESHVFVALEEARRLFRMGDRVDGIALRLDDVAHAA 244
Query: 239 KTHENIVRILG-NGVVVIDWQQRYQIFFSCY 268
+ + L V W + +
Sbjct: 245 ALKALLEQRLDTTRYRVQTWYDLQRGLYDVM 275
>gi|304559307|gb|ADM41971.1| Lipoprotein releasing system transmembrane protein LolC
[Edwardsiella tarda FL6-60]
Length = 375
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 59/243 (24%), Positives = 101/243 (41%), Gaps = 7/243 (2%)
Query: 28 ASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRL 87
S++S IG+ +GVMAL+ V+SVMNGF D+ + +L + V+ L ++ A+ L
Sbjct: 1 MSWLSTIGITLGVMALVTVLSVMNGFERDLEQSILNLMPQAVVTTPQGQLDPARYPASLL 60
Query: 88 DFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRG 147
+P V +V P +G + S G GV++ + S
Sbjct: 61 QGLPGVHRVAPLTTGDVVLQSPHSVGVGVMIGVNPTEAD---PLDRYLNGVSQSALQPGQ 117
Query: 148 KGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMV 207
I+G LA LG+ GD++ ++ P I S+ + + D +
Sbjct: 118 YRAILGSQLAAELGVKAGDRVRLMVPSASQFTPMGRIPSQRIFTVIGTFNADSEVDQTQL 177
Query: 208 YMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFS 266
++ Q+A +SG +F+ P IE + L +G+V DW+ R F
Sbjct: 178 LVNQQDASRLMRYPLGHISGWRLFMDRPLDIEAL---VAHALPDGLVWQDWRARKGELFQ 234
Query: 267 CYE 269
+
Sbjct: 235 AVK 237
>gi|308184571|ref|YP_003928704.1| lipoprotein release system transmembrane protein [Helicobacter
pylori SJM180]
gi|308060491|gb|ADO02387.1| lipoprotein release system transmembrane protein [Helicobacter
pylori SJM180]
Length = 410
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 62/267 (23%), Positives = 109/267 (40%), Gaps = 2/267 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ RYL ++ FISI + ++F GV +GVM LIV M++MNG ++ K++ +
Sbjct: 4 RSLIFFLIKRYLRFDKSQPFISITALLAFFGVAVGVMVLIVAMAIMNGMSKEFEKKLFVM 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N + + + + + P+++ + S S G V S
Sbjct: 64 NYPLTLYTTSPYGISEEVVQALEKKFPNLLFSPYLQTQSLIKSAHSMNGGVVFGVDFSKE 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + N ++ F +I+GK L +L + + K ++ + T + +
Sbjct: 124 RRINEVLNDALKNTNTNDLFKNPFNLIVGKSLRYSLNLDLNQKADLFFTELEPTGLTLSP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDP-DAIEKTHE 242
K +T+ G F YD +Y SLQ L G+ V+ K P IE
Sbjct: 184 IMKRFTIKGDFDSGLKSYDMSYMYASLQAISAIRRLPLGLYDGVHVYSKAPMKDIENLRN 243
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I +G+ + W Q+ FFS E
Sbjct: 244 ALKTINHHGIGIEGWWQQNGNFFSAME 270
>gi|261839397|gb|ACX99162.1| lipoprotein release system transmembrane protein [Helicobacter
pylori 52]
Length = 410
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 62/267 (23%), Positives = 109/267 (40%), Gaps = 2/267 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ RYL ++ FISI + ++F GV +GVM LIV M++MNG ++ K++ +
Sbjct: 4 RSLIFFLIKRYLRFDKSQPFISITALLAFFGVAVGVMVLIVAMAIMNGMSKEFEKKLFVM 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N + + + + + P+++ + S S G V S
Sbjct: 64 NYPLTLYTTSPYGISEEVVQALEKKFPNLLFSPYLQTQSLIKSAHSMNGGVVFGVDFSKE 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + N ++ F +I+GK L +L + + K ++ + T + +
Sbjct: 124 RRINEVLNDALKNTNENDLFKNPFNLIVGKSLRYSLNLDLNQKADLFFTELEPTGLTLSP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDP-DAIEKTHE 242
K +T+ G F YD +Y SLQ L G+ V+ K P IE
Sbjct: 184 IMKRFTIKGDFDSGLKSYDMSYMYSSLQAISAIRRLPLGLYDGVHVYSKAPMKDIENLRN 243
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I +G+ + W Q+ FFS E
Sbjct: 244 ALKTINHHGIGIEGWWQQNGNFFSAME 270
>gi|150024348|ref|YP_001295174.1| ABC transporter permease [Flavobacterium psychrophilum JIP02/86]
gi|149770889|emb|CAL42354.1| Probable ABC-type transport system, permease component
[Flavobacterium psychrophilum JIP02/86]
Length = 399
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 48/270 (17%), Positives = 93/270 (34%), Gaps = 4/270 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RY+FS N I+I S I+ G++IG M L V MS+ +G +E +
Sbjct: 1 MNFPFYIAKRYVFSRSSNNAINIISKIALGGIVIGAMVLFVFMSIFSGLKEFSLSFSNNF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR--GIS 122
+ + I KY R I + + + ++
Sbjct: 61 DPDLKIIPKYGKSFLISEDQKRRIGANTDIAFCSKTIEEKVLFLYKNKEQVAYLKGVDSQ 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARN-LGISIGDKINILSPYGDVTPMG 181
+ + + V G +I + L+ + +I + P
Sbjct: 121 YNLVNNVSKVMYEGQWLVPKTPQVVVGNMIAQKLSLGLFDLDNAFEIFVPKPGKGAISNP 180
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFN-LENAVSGIEVFVKDPDAIEKT 240
+KS V + D+ V+ L+ AQ N +SG+E+ + E
Sbjct: 181 ENAFNKSNLVPIGIYAVNDELDSKYVFADLELAQELLEFKPNQISGLEIKLSSKAKSETV 240
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+++ + N V++ + Q+ + +
Sbjct: 241 VDDLNVVFSNQVIIKNRAQQNDSLYKMLNT 270
>gi|330433177|gb|AEC18236.1| outer membrane-specific lipoprotein transporter subunit LolC
[Gallibacterium anatis UMN179]
Length = 394
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 54/268 (20%), Positives = 99/268 (36%), Gaps = 11/268 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ ++VA RY S + F + + ++ +G+ +GVMALI+V+SVMNG + VL
Sbjct: 1 MSVNVPLMVALRYWRSKSGDRFGRLVTRLAGVGITLGVMALIIVLSVMNGLENYQKQNVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+I + P Q +L V V + S + I
Sbjct: 61 ENIPQAIITPQQAPFSLTQDQLPKL-----PKFVTKVVPINRANVIMQSSDGLSAAQLIG 115
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ +IIG LAR + +GDK+ +L P V
Sbjct: 116 VQQRQDDPLLSGIDEKLATLIPPGEFNLIIGVQLARQNKLVVGDKVRLLIPENSVYTPLG 175
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
+ + + + + ++ +LQ+ L + V G +F++DP I +
Sbjct: 176 RVPMQRLFTVAAIYPDW--SADNQIFAALQDVGRLLRLKPDQVQGQRLFLQDPFLITELP 233
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + DW+ + FF +
Sbjct: 234 NYFPK---DKWQIDDWRSQKGEFFQSVK 258
>gi|331000226|ref|ZP_08323910.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Parasutterella excrementihominis YIT 11859]
gi|329572392|gb|EGG54045.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Parasutterella excrementihominis YIT 11859]
Length = 377
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 56/230 (24%), Positives = 107/230 (46%), Gaps = 2/230 (0%)
Query: 41 MALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFV 100
MALI+V+SVMNGF++++ ++L + H + P+ D+Q A L I
Sbjct: 1 MALIIVLSVMNGFQKEVRDKMLSVLSHAEVLSIGAPIPDWQKTAAELKKQQPEIIGAAPF 60
Query: 101 SGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSND-FDRGKGVIIGKDLARN 159
+ + GV + GI S + + +D +I+G DLAR
Sbjct: 61 LRGQGLLTSGTNVRGVQLNGIDPETESQVSDVAKNMKIGRLSDLKPGEFKIILGTDLARM 120
Query: 160 LGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFN 219
LG+ G+K+N++ P G TP G R + +TV G+F ++D+ M +++L +A+
Sbjct: 121 LGVIPGEKVNVMVPQGQFTPAGTMPRMRQFTVAGVFNSGHYEFDSAMSFINLTDAEKLMR 180
Query: 220 LENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ GI + + + + + + G++ DW ++ + +F+ +
Sbjct: 181 TQTP-GGIRLKLSNMQDAPRVAAELNNQMPPGLLATDWSRQNRTWFAAVQ 229
>gi|88705095|ref|ZP_01102807.1| lipoprotein releasing system transmembrane protein LolE
[Congregibacter litoralis KT71]
gi|88700790|gb|EAQ97897.1| lipoprotein releasing system transmembrane protein LolE
[Congregibacter litoralis KT71]
Length = 405
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 54/261 (20%), Positives = 100/261 (38%), Gaps = 11/261 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A RY + + + +S G+++G L+ V+SVMNGF +M +R+L + HV
Sbjct: 7 LRIALRYTLAFGRGHLSVFMAGVSMTGLVLGTALLLTVLSVMNGFEREMRERILALVPHV 66
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + A RL+ + V V PFVS + + +
Sbjct: 67 TVHTSPDGGAASEL-AGRLEALTSVETVSPFVSFDGMAIRGRDVMAISALGLQRLPAETA 125
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
GV++G +A LG+ GD I I+ P +
Sbjct: 126 DVLGV--------ESLGELSGVVLGDSVAGRLGVETGDSITIIVPPRSRERRNAIATER- 176
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ + D + MSL +A L+ +SG+++ DP A+++ + R L
Sbjct: 177 -LPVAAVVDTGTELDESLALMSLGQASTLAGLQGGISGLQLRYSDPFAVDRLLPQLRREL 235
Query: 249 GNGVVVIDWQQRYQIFFSCYE 269
G W+ + ++ +
Sbjct: 236 PPGSYATTWRMTHGNLYAAIQ 256
>gi|269120176|ref|YP_003308353.1| hypothetical protein Sterm_1563 [Sebaldella termitidis ATCC 33386]
gi|268614054|gb|ACZ08422.1| protein of unknown function DUF214 [Sebaldella termitidis ATCC
33386]
Length = 385
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 48/263 (18%), Positives = 102/263 (38%), Gaps = 18/263 (6%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
E+ +A R+L + S S +GV I V L+V ++V NG ++M+K +L +N
Sbjct: 2 VELFIAVRHLKERK------FQSIFSILGVAISVTVLMVSLTVSNGLEKNMLKSLLTLNP 55
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
H+V+ + + I ++ V + S + + V +
Sbjct: 56 HIVL--TKGNGDVSEDYMDVKKKIEEINGVKGVIPKYTAQSIIKTDEYAKGVLANGIPNE 113
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ + + + +I + G+ +GD I +++
Sbjct: 114 DLEKTIDLKMVAGKKSLPELDSAIIGEEMAYEFGGLKVGDDIKVITTENKEVR------- 166
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ + G+F+ + +YD ++ + LQ Q+ +S I+V + +P E + I +
Sbjct: 167 --FKISGIFKTGYYEYDRNLLLIPLQTMQILQERGEVISEIDVMLNNPKDAEAVKQKIEK 224
Query: 247 ILGNGVVVIDWQQRYQIFFSCYE 269
LG V W ++ Q + +
Sbjct: 225 -LGFNYQVNTWGEQNQQLLNAVK 246
>gi|154174987|ref|YP_001408405.1| PglC [Campylobacter curvus 525.92]
gi|112802928|gb|EAU00272.1| PglC [Campylobacter curvus 525.92]
Length = 399
Score = 100 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 53/266 (19%), Positives = 110/266 (41%), Gaps = 9/266 (3%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ + ++YL ++ FI++++ ++F+GV IG+M LIV M++MNGF ++ +++
Sbjct: 1 MTSLPKYLLFKYLRFDKTQPFITLSAMLAFLGVSIGLMVLIVAMAIMNGFDKEFERKLFT 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+N + + + ++ + A P++ + ++ G L+ G+++
Sbjct: 61 MNYPISVMSAFKGEINDELTAELKAKFPELKF--SPYISTQVIYRGANTLEGGLLFGVNS 118
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+D + + + D ++IG + G+ DK+ ++ D +
Sbjct: 119 ADEKQINSVVKEALKDKELDGY---EILIGSGIKSEFGLKQNDKLTLIFTKADPGGFSLI 175
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAV-SGIEVFVKDPDAIEKTHE 242
+ K + V F YD Y S Q + + V GI V+ P
Sbjct: 176 PKMKRFDVAAGFSSGLIAYDKTYSYTSAQALRKILDYPEGVYDGIHVYSPKPFD---DLA 232
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G+ I W Q+ FFS
Sbjct: 233 RVQEALPMGLKAIGWWQQNGNFFSAL 258
>gi|71892175|ref|YP_277907.1| outer membrane lipoproteins ABC transporter membrane protein
[Candidatus Blochmannia pennsylvanicus str. BPEN]
gi|71796281|gb|AAZ41032.1| transport protein of outer membrane lipoproteins (ABC superfamily,
membrane) [Candidatus Blochmannia pennsylvanicus str.
BPEN]
Length = 401
Score = 100 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/268 (17%), Positives = 100/268 (37%), Gaps = 6/268 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +A RY+ + F + S +MIGVM+ I V+SVMNGF ++ + +L
Sbjct: 1 MHRSTILFIALRYISGKSIDQFGRYIYWFSSFAIMIGVMSTITVLSVMNGFERELKQNLL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H ++ + LD + ++ P V + + GV++
Sbjct: 61 NFIPHALLTTSKGYVHVRDKPNLVLDQLHNITHEEPLVISDVILQSSNKISFGVMLGINP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + +I+G +LA+ L I D+I ++ P
Sbjct: 121 DCFE---PLCDYLVNKHENQLVLGKYYIILGSELAKKLEAHINDQIRLIIPSVMQITPIG 177
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTH 241
I S+ + + + D+ V + +A + V+G +++ +P +
Sbjct: 178 YIPSQRLFTVLDIFITNSEVDSYQVLVHQSDAAALMHYPLQCVTGWRLWLHEPFLLSNYT 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + L + DW++ F +
Sbjct: 238 QQLR--LHTDWIWKDWREYKGSLFQAMK 263
>gi|257459668|ref|ZP_05624777.1| lipoprotein release system transmembrane protein [Campylobacter
gracilis RM3268]
gi|257443093|gb|EEV18227.1| lipoprotein release system transmembrane protein [Campylobacter
gracilis RM3268]
Length = 404
Score = 100 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 56/271 (20%), Positives = 106/271 (39%), Gaps = 11/271 (4%)
Query: 1 MSIFSR--FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMI 58
M + + ++YL +R FI++++ ++F+GV +G+ LIV M++MNGF ++
Sbjct: 1 MKFYKDSFLVKYLLFKYLRFDRSQPFITLSALLAFLGVGVGLTVLIVAMAIMNGFDKEFE 60
Query: 59 KRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
+++ +N + + ++ + L + P++S Q G G++
Sbjct: 61 RKLFTMN-YPITIHSHFRGGISKDDVEGLRADFPDLIFSPYISSQVIAKGGDRLEGGLIF 119
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
N + + S + G++IG+ + + G KI ++ D
Sbjct: 120 GVNLNDE----KRINSVVAAGAKDANLTDYGIMIGRGIKDEFMLDEGSKITMIFTKSDPG 175
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAI 237
+ + K + V F YD Y + E G+ VF DP
Sbjct: 176 GFALIPKMKRFDVRADFSSGLIAYDKAYSYADASDLAKILGYDEGTFDGVHVFSNDPF-- 233
Query: 238 EKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
K E I + L G + W Q+ FFS
Sbjct: 234 -KDLERIKKSLPGGASAVGWWQQNGNFFSAL 263
>gi|329895070|ref|ZP_08270815.1| Lipoprotein releasing system transmembrane protein LolC [gamma
proteobacterium IMCC3088]
gi|328922515|gb|EGG29853.1| Lipoprotein releasing system transmembrane protein LolC [gamma
proteobacterium IMCC3088]
Length = 400
Score = 100 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 51/268 (19%), Positives = 109/268 (40%), Gaps = 17/268 (6%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +F + +A RY+ + + S +S G+++ V + VVMSVMNGF +M RVL
Sbjct: 1 MNLKFRLGIALRYVLTREQAPLSRFLSLLSVTGLVLAVALMAVVMSVMNGFDREMRTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ HV + A L+ ++L Q+ + G + +
Sbjct: 61 AVIPHVSVMG-----------AGGLEPSDLAEQLLSNADVQSVTPFVELQGLVQNGKQVE 109
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + S + ++ GV +G+ L + L S+GD+++++ P
Sbjct: 110 AFVGVGVSDPSSWLLPGMISNDKPKPGVWVGERLGQRLNASVGDRVSVVIPDSGDQKARA 169
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN-AVSGIEVFVKDPDAIEKTH 241
+ + + + D+ ++ + LQ+AQ + ++ VSG++V ++D
Sbjct: 170 YTVTIAGWL-----STQTEADDALILLPLQDAQRFVGYDSVKVSGLKVQLQDVFLAPWFA 224
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + L V W + ++ +
Sbjct: 225 QGLQYTLAPTQYVRHWGMTHGNLYAAIQ 252
>gi|298373456|ref|ZP_06983445.1| membrane protein [Bacteroidetes oral taxon 274 str. F0058]
gi|298274508|gb|EFI16060.1| membrane protein [Bacteroidetes oral taxon 274 str. F0058]
Length = 411
Score = 99.8 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 53/270 (19%), Positives = 112/270 (41%), Gaps = 8/270 (2%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
+ VAWRYLFS + I+I S IS IG++I AL+ V+SV NGF + +
Sbjct: 7 KLTFFVAWRYLFSKKSRNVINIISLISAIGIVISTAALVCVLSVFNGFVGIIEDSYSAFD 66
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+ I + D+ +A++++ + ++ V +V + + + +RG+ +
Sbjct: 67 SELQITAATGKVFDFTDVAHKVETVDNIAAVS-YVLEDDALIAYYNSQTPFRMRGVDAAY 125
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGK------DLARNLGISIGDKINILSPYGDVTP 179
L G ++G +L + + + ++
Sbjct: 126 SKVLDMDSMMMEGQFRLYDFDFDVSVVGIGLASKLNLGVDYVNGLTIYVPQRQGKINIAR 185
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN-AVSGIEVFVKDPDAIE 238
R V G+F P+ D+ M+ + L+ AQ ++ ++ VS +E +++ + ++
Sbjct: 186 PDAAFRKGELFVCGIFASHQPEIDDNMLIVPLEFAQKMYDYDSLTVSSVEFKLRNIEQLK 245
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
KT + +LG+ V + ++ +
Sbjct: 246 KTEREVQNLLGDRYKVQNRGEQQADYLRII 275
>gi|319760528|ref|YP_004124466.1| lipoprotein-releasing system transmembrane protein lolC [Candidatus
Blochmannia vafer str. BVAF]
gi|318039242|gb|ADV33792.1| lipoprotein-releasing system transmembrane protein lolC [Candidatus
Blochmannia vafer str. BVAF]
Length = 403
Score = 99.8 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 53/262 (20%), Positives = 107/262 (40%), Gaps = 6/262 (2%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A+RY+F N F ++S I +M+ + +I+++SVMNGF ++ K +L + H++
Sbjct: 8 FIAFRYIFGKTINQFSRYIYWVSSIFIMLSIAVMIIILSVMNGFESELKKNLLYLTPHIL 67
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
I + D I + + S ++ GI + F L
Sbjct: 68 ITSSSGYTHVNNIPNFLFHEMSDNIAYFKPLVISNIILQGLKEISLGMLLGIDPNHFEPL 127
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM-GMGIRSKS 188
+ N++ +IIG +LA+ L + I D+I I+ P + G +
Sbjct: 128 SKYLKQN-NNITKLVSGEYNIIIGSELAQKLSVKINDQIRIIVPSVNQITPIGCLFSQRL 186
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTHENIVRI 247
+T+ ++ +D V M +A + + + V+G ++V +P + K
Sbjct: 187 FTISDIYFSNNGGFDTNQVLMHKDDAAVLLHYPDRCVTGWRIWVHEPFKLNKFD---YLD 243
Query: 248 LGNGVVVIDWQQRYQIFFSCYE 269
+ + DW++ F +
Sbjct: 244 IPKDWIWKDWREYKGSLFQAIK 265
>gi|313682601|ref|YP_004060339.1| hypothetical protein Sulku_1477 [Sulfuricurvum kujiense DSM 16994]
gi|313155461|gb|ADR34139.1| protein of unknown function DUF214 [Sulfuricurvum kujiense DSM
16994]
Length = 398
Score = 99.5 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 9/261 (3%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+ R+L +++ FI +++ ++F G+ +GVM LI+ M++MNGF + K++ +N +
Sbjct: 6 YLVKRFLRFDKEQPFIFLSALLAFSGIALGVMVLIIAMALMNGFDNEFKKKLTVMNYPMT 65
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
IQ K+Y D + PD+ S SG G + +
Sbjct: 66 IQPKFYATCDTALLEQLRQKFPDLSFSPYVTSAVLSRSGDQMEGGYLFGVDFAQEAKVN- 124
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
+ + V++GK L + G+K+ + + + + + K +
Sbjct: 125 ----RIVAEGLRGGIPKNFEVMVGKSLKEEFQLDSGEKLTYIFTQMEPGGLALTPKIKRF 180
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHENIVRIL 248
V+ F YD G Y SL Q + N GI V +P E + L
Sbjct: 181 NVVSTFNSGLSAYDKGFSYTSLSALQRILGIPENLYDGIHVHSANP---EADIGRVAAAL 237
Query: 249 GNGVVVIDWQQRYQIFFSCYE 269
+ V + W + FF+ +
Sbjct: 238 PDTVSIRGWWEDNGNFFAALK 258
>gi|224372994|ref|YP_002607366.1| efflux ABC transporter, permease protein [Nautilia profundicola
AmH]
gi|223590009|gb|ACM93745.1| efflux ABC transporter, permease protein [Nautilia profundicola
AmH]
Length = 397
Score = 99.5 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 57/266 (21%), Positives = 119/266 (44%), Gaps = 10/266 (3%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +F + RYL ++K+ FI I+ ++F+G+M GV L++ M +MNG ++ K++
Sbjct: 1 MNKKFVNFIIRRYLRFDKKHPFIYISFILAFLGIMTGVATLMIAMGIMNGMDKEFEKKLK 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+N + + + + + ++L K P++ A + S G + +
Sbjct: 61 VMNYPITVYSSL--VNVDEKLLHKLQKKFPDFKYSPYIESSAVIQKNSLNGVMLYGVDFN 118
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ V++G L +LGI+ G+K+ ++ G+
Sbjct: 119 KES----EINYIFKKAVKDLKKPGLFDVVVGSRLFADLGIARGEKVIMIFSKLSPMGFGI 174
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
K ++G+F YD G+ YM+++ + + +N SGI ++ +P K +
Sbjct: 175 SPILKKVKIVGVFNSGLVAYDKGIAYMNIEGLKRILH-QNHYSGIHIWSPNPF---KDIQ 230
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCY 268
I + + GV VI W ++ FF+
Sbjct: 231 KIKKAVPPGVGVIGWWEQNGNFFAAL 256
>gi|149194618|ref|ZP_01871714.1| permease, putative [Caminibacter mediatlanticus TB-2]
gi|149135362|gb|EDM23842.1| permease, putative [Caminibacter mediatlanticus TB-2]
Length = 397
Score = 99.5 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 58/267 (21%), Positives = 113/267 (42%), Gaps = 10/267 (3%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +F + RYL ++K+ FI I+ ++F+G++ GV L++ M +MNG ++ K++
Sbjct: 1 MNKKFVNFIVKRYLRFDKKHPFIYISFLLAFLGILTGVATLMIAMGIMNGMDKEFEKKLK 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+N + + + + F S +GL+ +
Sbjct: 61 VMNYPITVYSSLVKVDKKLLLYLEKKFPNYKYSPYIQTSAIIQKNGLNGVLVYGVDFEKE 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ D VI+GK L ++G+ +K+ ++ G+
Sbjct: 121 RKINFVINDALKNIKNIGKFD------VIVGKRLFEDIGLYPNEKVIMIFSKMTPIGFGV 174
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
K + G F YD G+ YM++Q ++ N ++ SGI ++ +P K E
Sbjct: 175 SPLMKKVKIRGYFNSGLVAYDKGIAYMNIQGLKIILN-QDYYSGIHIWTPNPF---KDIE 230
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I +IL GV +I W Q+ FF+ +
Sbjct: 231 KIKKILPPGVGIIGWWQQNGNFFAALK 257
>gi|116332221|ref|YP_801939.1| lipoprotein releasing system, LolE permease component [Leptospira
borgpetersenii serovar Hardjo-bovis JB197]
gi|116125910|gb|ABJ77181.1| Lipoprotein releasing system, LolE permease component [Leptospira
borgpetersenii serovar Hardjo-bovis JB197]
Length = 457
Score = 99.5 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 60/288 (20%), Positives = 123/288 (42%), Gaps = 24/288 (8%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
++ RY+ +R +S+ S +SFI + +GV LIVV+S+ NGF+ + + +
Sbjct: 9 SLIFLITSRYIRGSRVAGLLSLKSRLSFIVMTVGVSLLIVVLSIFNGFQRQVKESLWQGG 68
Query: 66 GHVVIQQKYY--PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
H+ ++ K+ + +Y+ I + P + + +SG GL + + +
Sbjct: 69 PHITVENKFDSGDIQNYEKIIAWIRKNPYLKDRIVSISGSITSHGLIQNANSFIPIMVRA 128
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVI----------IGKDLARNLGISIGDKINILSP 173
+ + + N + I IGK++A ++G + + P
Sbjct: 129 LPVENIHDLITNRLTNFPRIVHHNREEIEKYNVDNQVLIGKEMAGLYDFNLGANLTMAVP 188
Query: 174 YGD-VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK 232
G G+ + K++ +G F+ + +YD V++SL AQ +FNL+N+V+ I + VK
Sbjct: 189 GGRFSLGKGVDVSIKTFRTVGFFKTGYYNYDTHYVFLSLPVAQKFFNLKNSVNQIAIKVK 248
Query: 233 DPDAIEKTHENIVRILGNG-----------VVVIDWQQRYQIFFSCYE 269
D ++ I++ + V + + FF+ +
Sbjct: 249 SLDDLQNCKREILKEFRDPEFENEIGYSASFSVRTIAEEQENFFTALK 296
>gi|307637477|gb|ADN79927.1| Lipoprotein releasing transmembrane protein [Helicobacter pylori
908]
gi|325996067|gb|ADZ51472.1| Lipoprotein release system transmembrane protein [Helicobacter
pylori 2018]
gi|325997663|gb|ADZ49871.1| putative lipoprotein releasing system transmembrane protein
[Helicobacter pylori 2017]
Length = 410
Score = 99.5 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 62/267 (23%), Positives = 110/267 (41%), Gaps = 2/267 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ RYL ++ FISI + ++F GV +GVM LIV M++MNG ++ K++ +
Sbjct: 4 RSLIFFLIKRYLRFDKSQPFISITALLAFFGVAVGVMVLIVAMAIMNGMSKEFEKKLFVM 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N + + + + + P+++ + S S G V S
Sbjct: 64 NYPLTLYTTSPYGISEEVVQALEKKFPNLLFSPYLQTQSLIKSAHSMNGGVVFGVDFSKE 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + N ++ F+ +I+GK L +L + + K ++ + T + +
Sbjct: 124 RRINEVLNDALKNINTNDLFNNPFSLIVGKSLRYSLNLDLNQKADLFFTELEPTGLTLSP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDP-DAIEKTHE 242
K +T+ G F YD +Y SLQ L G+ V+ K P IE
Sbjct: 184 IMKRFTIKGDFDSGLKSYDMSYMYASLQAISAIRRLPLWLYDGVHVYSKTPMKDIENLRN 243
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I +G+ + W Q+ FFS E
Sbjct: 244 ALKTINHHGIGIEGWWQQNGNFFSAME 270
>gi|116327122|ref|YP_796842.1| lipoprotein releasing system, LolE permease component [Leptospira
borgpetersenii serovar Hardjo-bovis L550]
gi|116119866|gb|ABJ77909.1| Lipoprotein releasing system, LolE permease component [Leptospira
borgpetersenii serovar Hardjo-bovis L550]
Length = 457
Score = 99.5 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 59/288 (20%), Positives = 122/288 (42%), Gaps = 24/288 (8%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
++ RY+ +R +S+ S +SFI + +GV LIVV+S+ NGF+ + + +
Sbjct: 9 SLIFLITSRYIRGSRVAGLLSLKSRLSFIVMTVGVSLLIVVLSIFNGFQRQVKESLWQGG 68
Query: 66 GHVVIQQKYY--PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
H+ ++ K+ + +Y+ I + P + + + G GL + + +
Sbjct: 69 PHITVENKFDSGDIQNYEKIIAWIRKNPYLKDRIVSIGGSITSHGLIQNANSFIPIMVRA 128
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVI----------IGKDLARNLGISIGDKINILSP 173
+ + + N + I IGK++A ++G + + P
Sbjct: 129 LPVENIHDLIANRLTNFPRIVHHNREEIEKYNVDNQVLIGKEMAGLYDFNLGANLTMAVP 188
Query: 174 YGD-VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK 232
G G+ + K++ +G F+ + +YD V++SL AQ +FNL+N+V+ I + VK
Sbjct: 189 GGRFSLGKGVDVSIKTFRTVGFFKTGYYNYDTHYVFLSLPVAQKFFNLKNSVNQIAIKVK 248
Query: 233 DPDAIEKTHENIVRILGNG-----------VVVIDWQQRYQIFFSCYE 269
D ++ I++ + V + + FF+ +
Sbjct: 249 SLDDLQNCKREILKEFRDPEFENEIGYSASFSVRTIAEEQENFFTALK 296
>gi|223040366|ref|ZP_03610641.1| PglC [Campylobacter rectus RM3267]
gi|222878324|gb|EEF13430.1| PglC [Campylobacter rectus RM3267]
Length = 398
Score = 99.5 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 59/266 (22%), Positives = 116/266 (43%), Gaps = 11/266 (4%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ ++YL ++ FI +++ ++F+GV +G+M LIV M++MNGF ++ +++ +
Sbjct: 1 MSLTKYLLFKYLRFDKTQPFIMLSALLAFLGVGVGLMVLIVAMAIMNGFDKEFERKLFTM 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N + + + ++L +K P++ Q + G +S G+L S
Sbjct: 61 N-YPITILSAIRGNIDESDVSKLQQKFPNLKFSPYIMSQVIIKGANSFEGGLLFGVNSTD 119
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + + G G+++G+ + + I+ DK+ ++ D + +
Sbjct: 120 EKQINS----VVAAGLEDRELDGYGLLVGQGVKNEMMINENDKLTLIFTKNDPSGFALTP 175
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPD-AIEKTHE 242
+ K + V+ F YD +Y S++ + + E GI VF DP IEK
Sbjct: 176 KMKRFDVVSSFSSGLVAYDKSYLYTSVEALRKILDYEEGKFDGIHVFSNDPFADIEKISR 235
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCY 268
+ LG I W Q+ FFS
Sbjct: 236 ELR--LGQ--KAIGWWQQNGNFFSAL 257
>gi|149369323|ref|ZP_01889175.1| hypothetical protein SCB49_05847 [unidentified eubacterium SCB49]
gi|149356750|gb|EDM45305.1| hypothetical protein SCB49_05847 [unidentified eubacterium SCB49]
Length = 399
Score = 99.5 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 43/270 (15%), Positives = 98/270 (36%), Gaps = 4/270 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F + +A RYLF+ N I+I + I+ GV++G MAL +V+S G +E ++
Sbjct: 1 MSFSLYIAKRYLFTKSSNNAINIITGIAATGVVVGAMALFIVLSGFGGLKEFSLQFSNFF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + + + + + I + V + + +++G+ +
Sbjct: 61 DSDLKVFPSEGKTITLDDALSSEILNIEGITAISEVIEERVYAQYKGKSHLAIIKGVDVN 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLA---RNLGISIGDKINILSPYGDVTPMG 181
+ +Y + + IG + K+++ P
Sbjct: 121 YGNVNPIDSILYYDSWLVPNKAEVVIGIGMATKLSTGTRDYANLLKLSVPKPGKGQILDP 180
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN-AVSGIEVFVKDPDAIEKT 240
+ S V+ D ++ V+ + A+ +L++ VS +E+ +KD E+
Sbjct: 181 SKAFTYSRAVISGIYNVNEDLNSKYVFSDIDFARELLSLDSTKVSALEIRLKDNANEERV 240
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ N V++ Q+ + +
Sbjct: 241 ITALNDAFSNKVIIKTRAQQNDALYKMLNA 270
>gi|242309282|ref|ZP_04808437.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
gi|239524323|gb|EEQ64189.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
Length = 411
Score = 99.5 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 61/266 (22%), Positives = 107/266 (40%), Gaps = 11/266 (4%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+ RYL N+ FISI + ++F+GV IGVM LIV M++MNGF ++ +++ +N +
Sbjct: 9 FLIRRYLRFNKHQPFISITAILAFLGVCIGVMVLIVAMALMNGFDKEFERKLFIMNYPLT 68
Query: 70 IQQKYYPL------VDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ + + D Q L F P + G + G L I+
Sbjct: 69 MISETFEKLDKTILEDLQKSFPHLKFSPFIQTQAISKMGNRMEGAMVFGVDFTLESQINP 128
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
Q + + N +IIG+ L G+ + ++ + +
Sbjct: 129 VFHQAYQQMQNFYTQNNQTYTPNTFDIIIGESLQNLYGLKYNSNLLLIFTHITPNATNLS 188
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHE 242
K + V G F YD G +Y SL+ Q+ N+ N GI ++ +P +K
Sbjct: 189 PTIKRFNVNGFFHSGLIAYDKGYIYTSLEAMQIIKNMPKNTYDGIHIYSSNP---QKDIL 245
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + +I W ++ FF+
Sbjct: 246 ALQESYPQ-MRIIGWWEQNGNFFAAL 270
>gi|307611128|emb|CBX00772.1| hypothetical protein LPW_24761 [Legionella pneumophila 130b]
Length = 385
Score = 99.1 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 69/239 (28%), Positives = 123/239 (51%), Gaps = 4/239 (1%)
Query: 33 FIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPD 92
+G+ +GVM LI V+SVMNGF +++ +R G+ + I L D+ + +++ IP
Sbjct: 1 MLGIGMGVMVLITVLSVMNGFDQEIHRRFFGMAPEITITGPDERLSDWPEVVKKVETIPG 60
Query: 93 VIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVII 152
+ + P+V Q ++ VL + + S + GN+ D + G+I+
Sbjct: 61 IKAIAPYVGSQGLLTHEGQVLPIVLTGILPEKEQSVTHLNKKLLAGNM--DNLKHFGIIL 118
Query: 153 GKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGM-VYMSL 211
GK LA +LG+ IGDK+ I+ P VTP GM R K +TV+G+F + ++++
Sbjct: 119 GKGLADSLGVMIGDKVTIMIPQATVTPAGMIPRFKRFTVVGVFSAGTGFNFDTKLAFINI 178
Query: 212 QEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
++AQ ++ N VSGI++ + + + + +LG G V +W Q++ FF +
Sbjct: 179 EDAQKLMQMDKNDVSGIKMKINNVYKAPELSYELSDLLGEGYQVGNWTQQFGAFFEAVK 237
>gi|296107876|ref|YP_003619577.1| lipoprotein-releasing system permease protein [Legionella
pneumophila 2300/99 Alcoy]
gi|295649778|gb|ADG25625.1| lipoprotein-releasing system permease protein [Legionella
pneumophila 2300/99 Alcoy]
Length = 385
Score = 98.7 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 69/239 (28%), Positives = 123/239 (51%), Gaps = 4/239 (1%)
Query: 33 FIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPD 92
+G+ +GVM LI V+SVMNGF +++ +R G+ + I L D+ + +++ IP
Sbjct: 1 MLGIGMGVMVLITVLSVMNGFDQEIHRRFFGMAPEITITGPDERLSDWPEVVKKVETIPG 60
Query: 93 VIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVII 152
+ + P+V Q ++ VL + + S + GN+ D + G+I+
Sbjct: 61 IKAIAPYVGSQGLLTHEGQVLPIVLTGILPEKEQSVTHLNKKLLAGNM--DNLKHFGIIL 118
Query: 153 GKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGM-VYMSL 211
GK LA +LG+ IGDK+ I+ P VTP GM R K +TV+G+F + ++++
Sbjct: 119 GKGLADSLGVMIGDKVTIMIPQATVTPAGMIPRFKRFTVVGVFSAGTGFNFDTKLAFINI 178
Query: 212 QEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
++AQ ++ N VSGI++ + + + + +LG G V +W Q++ FF +
Sbjct: 179 EDAQKLMQMDKNDVSGIKMKINNVYKAPELSYELSDLLGEGYQVGNWTQQFGAFFEAVK 237
>gi|294827608|ref|NP_710454.2| lipoprotein releasing system permease [Leptospira interrogans
serovar Lai str. 56601]
gi|293385452|gb|AAN47472.2| permease component of lipoprotein releasing system [Leptospira
interrogans serovar Lai str. 56601]
Length = 457
Score = 98.7 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 61/288 (21%), Positives = 121/288 (42%), Gaps = 24/288 (8%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
+V RY+ +R +S+ S +SFI + +GV LIVV+S+ NGF+ + + +
Sbjct: 9 SLIFLVTSRYIRGSRVAGLLSLKSRLSFIVMAVGVSLLIVVLSIFNGFQRQVKESLWQGG 68
Query: 66 GHVVIQQKYY--PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
H+ ++ K+ + +Y+ I L P + + + G GL + + +
Sbjct: 69 PHITVENKFDSGDIKNYEKIIAWLSRNPYLKDRIVSIGGSITSHGLIQNTNSFIPIMVRA 128
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVI----------IGKDLARNLGISIGDKINILSP 173
+ + N + I IGK++A +G + + P
Sbjct: 129 LPVENIHDLVGNKLTNFPRIVHHNREEIARYNVENQVLIGKEMAGIYDFDLGANLTMAVP 188
Query: 174 YGD-VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK 232
G G+ + K++ +G F+ + +YD V++SL AQ +FNL+++V+ I + VK
Sbjct: 189 GGRFSLGKGVDVSIKTFRTVGFFKTGYYNYDTHYVFLSLPVAQKFFNLKDSVNQIAIKVK 248
Query: 233 DPDAIEKTHENIVRILGNG-----------VVVIDWQQRYQIFFSCYE 269
D ++ + I++ N V + + FF+ +
Sbjct: 249 SLDDLQNCKKEILKEFRNPDFENEIGYSASFSVRTIAEEQENFFTALK 296
>gi|157165025|ref|YP_001466675.1| Rrf2 family protein [Campylobacter concisus 13826]
gi|112800471|gb|EAT97815.1| lipoprotein release system transmembrane protein [Campylobacter
concisus 13826]
Length = 399
Score = 98.7 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 50/266 (18%), Positives = 107/266 (40%), Gaps = 9/266 (3%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ + ++YL ++ FI++++ ++F+GV IG+M LIV M++MNGF ++ +++
Sbjct: 1 MTSLPKYLLFKYLRFDKTQPFIALSALLAFLGVSIGLMVLIVAMAIMNGFDKEFERKLFT 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+N + + Q + + L +K P++S Q ++ G++
Sbjct: 61 MN-YPITVQSAFKGSIDDGFVDELKAKFSDLKFSPYISTQVIYRSANALEGGLIYGVNFK 119
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + G +++G + + +K+ ++ D +
Sbjct: 120 DEKQINSVVNEA----LKDKELEGFEILVGSGITSEFRLRDDEKLTLIFTKADPAGFSLT 175
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAV-SGIEVFVKDPDAIEKTHE 242
+ K + + G F YD Y S+ + + V GI +F P +
Sbjct: 176 PKMKRFDIGGSFTSGLIAYDKAFSYTSVDALRKILDYPKGVYDGIHIFSSKPFD---DIK 232
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L G V I W ++ FFS
Sbjct: 233 RVREWLPAGTVAIGWWEQNGNFFSAL 258
>gi|85711276|ref|ZP_01042335.1| ABC-type transport system, involved in lipoprotein release,
permease component [Idiomarina baltica OS145]
gi|85694777|gb|EAQ32716.1| ABC-type transport system, involved in lipoprotein release,
permease component [Idiomarina baltica OS145]
Length = 408
Score = 98.7 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 43/263 (16%), Positives = 95/263 (36%), Gaps = 5/263 (1%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+A R+ ++ + + S +G+++G LI +S+MNGF + +++L
Sbjct: 2 LTFKLAQRFSERRSRSGLFAFIASSSTVGIVLGCAVLIASLSMMNGFENVLEQKLLKAVP 61
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
H + A + +V + L SG + +
Sbjct: 62 HA---SFTKVEGTFDNWARIVKIAKRDSRVAEAYPVIKQTAMLRSGDQFKGIMLEGIAPN 118
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
++ F ++ +++G+ +A G+ +GD + +L R
Sbjct: 119 GPHPSATEFFTDGARAQLNQLNTIVLGQGIAHTYGVEVGDTLELLVADKSSQQFRSPQRH 178
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ + + D+ M Y+SL A++ +++ VS +E+ V D + ++
Sbjct: 179 R--LKVVGLFEFGGELDHQMGYVSLDTARVIGEIKHGVSTVELKVTDVFQAPQVANSVGN 236
Query: 247 ILGNGVVVIDWQQRYQIFFSCYE 269
L V V W + + E
Sbjct: 237 QLPELVYVDHWMRTQGHLYRDIE 259
>gi|227536016|ref|ZP_03966065.1| lipoprotein releasing system transmembrane protein
[Sphingobacterium spiritivorum ATCC 33300]
gi|227244129|gb|EEI94144.1| lipoprotein releasing system transmembrane protein
[Sphingobacterium spiritivorum ATCC 33300]
Length = 411
Score = 98.7 bits (243), Expect = 9e-19, Method: Composition-based stats.
Identities = 46/270 (17%), Positives = 96/270 (35%), Gaps = 4/270 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
A RYLFS + I+I S IS IGV++ AL++V+S NG + ++
Sbjct: 1 MNLSYFFAKRYLFSKKSVNAINIISMISVIGVLVSSAALVIVLSFYNGMEKLILSMFSTF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + I+ L + IK V + + + ++GI +
Sbjct: 61 SPELRIEPAEGKLFSTKNQLFEELRKSKDIKSYSEVLEEKALLQFGNHQFIGKLKGIEPN 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGIS----IGDKINILSPYGDVTPM 180
+ + G + IIG ++ NL I + G +
Sbjct: 121 SLHQHASDSMLYAGEFEIFKEDVSYAIIGANVQANLQIPIVGLRNTMLINSPRKGSTNAV 180
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ +++ + +V + A+ + VS IE++ + P+ + +
Sbjct: 181 NPADDIIQRGISPRGVLKYQQGFDDLVITPIDFARDALGEYDKVSAIEMYTRQPEKLAEI 240
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ I LG V++ +++ + +
Sbjct: 241 EKQIQDKLGKDFKVLNREEQNPTLYKTVST 270
>gi|332176748|gb|AEE12438.1| protein of unknown function DUF214 [Porphyromonas asaccharolytica
DSM 20707]
Length = 404
Score = 98.3 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 47/271 (17%), Positives = 102/271 (37%), Gaps = 6/271 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
R + +AWRYLF+++K I+I + +S + + + M +I V+S+ NG+ + ++ +V+G+
Sbjct: 1 MRLPLFIAWRYLFAHKKLGAINIVTRVSVLAIAVVSMTMICVLSIYNGYEQMILDKVVGL 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ ++I + +D + + I + + P V G+ VS + +S
Sbjct: 61 DPQLLITKGDEAPLDQGVVTQEIRSIKGIKSIAPLVWGEGLVSRMEGESFSAAHLYGVDS 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + N Y + L N D + I P +
Sbjct: 121 TYLRISNMERYLYSGDIAIHPGQYNLGASIALNLNTIAHDTDPLVITLPKRKGYINPIMP 180
Query: 185 RSKSYTVLGMFRMRFPDYD---NGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKT 240
+ G+ + + +++ L E + L EN G+ + + +
Sbjct: 181 MTSLRRSQGVPVSVLFTDNVVYDNSIFIPLSELRSLLMLDENQAHGLALQLDEGADEGAI 240
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFS--CYE 269
+ I LG +V + ++ E
Sbjct: 241 QKAIATKLGEEYLVRNRPEQQPHLMRLVAIE 271
>gi|254446520|ref|ZP_05059996.1| efflux ABC transporter, permease protein [Verrucomicrobiae
bacterium DG1235]
gi|198260828|gb|EDY85136.1| efflux ABC transporter, permease protein [Verrucomicrobiae
bacterium DG1235]
Length = 409
Score = 98.3 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 52/266 (19%), Positives = 97/266 (36%), Gaps = 6/266 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ + +A R+ F K + +S GV++G MAL+VV+SV NGF + + V
Sbjct: 1 MPWYLYIAIRHTFPKGKR--WPFFTIMSVTGVVLGTMALVVVLSVFNGFGHAIREVVSET 58
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
G + + DY+ L P V P G + + +
Sbjct: 59 TGDLKVMNGLIFE-DYEDKIETLKESPLVHSAAPSAFGVVVLQAGNRPIFPQIQGVDIEE 117
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT-PMGMG 183
+ + + G S D ++I +A L I +GD+++I +P
Sbjct: 118 EREIVPLDNYVYSG--SLDEMDDDSILISSGIANTLRIRVGDEVDIYTPLMIEHLKKDEI 175
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ + V G+F F D + +L+ Q + L V I+V + D +
Sbjct: 176 LLPRLMRVAGLFETGFAKIDENTIISTLRTMQDLYGLGEGVHAIKVKLNDGVDADSAATE 235
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + V W + + + +
Sbjct: 236 LQKSFERPFRVSTWLESNAEYLAIIQ 261
>gi|300771721|ref|ZP_07081596.1| probable lipoprotein releasing system transmembrane protein
[Sphingobacterium spiritivorum ATCC 33861]
gi|300761710|gb|EFK58531.1| probable lipoprotein releasing system transmembrane protein
[Sphingobacterium spiritivorum ATCC 33861]
Length = 411
Score = 98.3 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/270 (17%), Positives = 97/270 (35%), Gaps = 4/270 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
A RYLFS + I+I S IS IGV++ AL++V+S NG + ++
Sbjct: 1 MNLSYFFAKRYLFSKKSVNAINIISMISVIGVLVSSAALVIVLSFYNGMEKLILSMFSTF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + I+ L + IK V + + + ++GI +
Sbjct: 61 SPELRIEPAEGKLFSTKNQLFEELRKSKDIKSYSEVLEEKALLQFGNHQFIGKLKGIEPN 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGIS----IGDKINILSPYGDVTPM 180
+ + G + IIG ++ NL I + G +
Sbjct: 121 SLHQHASDSMLYAGEFEIFKEDVSYAIIGANVQANLQIPIVGLRNTMLINSPRKGSTNAV 180
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ +++ + +V + A+ + VS IE++ + P+ + +
Sbjct: 181 NPADDIIQRGISPRGVLKYQQGFDDLVITPIDFARDALGEYDKVSAIEMYTRQPEKLAEI 240
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ I LG G V++ +++ + +
Sbjct: 241 EKQIQDKLGKGFKVLNREEQNPTLYKTVST 270
>gi|293392258|ref|ZP_06636592.1| lipoprotein releasing system, transmembrane protein LolE
[Aggregatibacter actinomycetemcomitans D7S-1]
gi|290952792|gb|EFE02911.1| lipoprotein releasing system, transmembrane protein LolE
[Aggregatibacter actinomycetemcomitans D7S-1]
Length = 416
Score = 98.3 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 51/265 (19%), Positives = 110/265 (41%), Gaps = 3/265 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++WRY S KN +S+ +F S +G+ +GV+ LIV +S MNGF ++ +R+L + H
Sbjct: 4 PFFISWRYQHSKHKNRLVSLIAFFSSMGIALGVVVLIVGLSAMNGFERELNQRILAVVPH 63
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGG---SGVLVRGISNS 124
I L + +S + L G V ++G+ +
Sbjct: 64 AEIISAPGQGDAPIDHWQNLAVKLKQNSQIRGISPFVSFTALVENGAKLKVVQIKGVETT 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + +F + G+++G +AR+L + GD +++L +
Sbjct: 124 LQDQVSSLGRFVLNAGWQNFAQNGGLVLGSGIARDLDVQEGDWVSLLISQQKGSENLTQP 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ V G+ R+ + + Q QL + V+G+E+ DP +++ ++
Sbjct: 184 LRERIQVTGILRLDGQLDHSYALMPLAQAQQLMSYRADQVTGVELKTADPFSVQNMDYSM 243
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
++ + + +W ++ + +
Sbjct: 244 LQNHPQMLYLQNWISKFGYMYRDIQ 268
>gi|45656137|ref|YP_000223.1| lipoprotein releasing system transmembrane protein [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|45599370|gb|AAS68860.1| lipoprotein releasing system transmembrane protein [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
Length = 458
Score = 98.3 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 61/288 (21%), Positives = 121/288 (42%), Gaps = 24/288 (8%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
+V RY+ +R +S+ S +SFI + +GV LIVV+S+ NGF+ + + +
Sbjct: 10 SLIFLVTSRYIRGSRVAGLLSLKSRLSFIVMAVGVSLLIVVLSIFNGFQRQVKESLWQGG 69
Query: 66 GHVVIQQKYY--PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
H+ ++ K+ + +Y+ I L P + + + G GL + + +
Sbjct: 70 PHITVENKFDSGDIKNYEKIIAWLSRNPYLKDRIVSIGGSITSHGLIQNTNSFIPIMVRA 129
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVI----------IGKDLARNLGISIGDKINILSP 173
+ + N + I IGK++A +G + + P
Sbjct: 130 LPVENIHDLVGNKLTNFPRIVHHSREEIARYNVENQVLIGKEMAGIYDFDLGANLTMAVP 189
Query: 174 YGD-VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK 232
G G+ + K++ +G F+ + +YD V++SL AQ +FNL+++V+ I + VK
Sbjct: 190 GGRFSLGKGVDVSIKTFRTVGFFKTGYYNYDTHYVFLSLPVAQKFFNLKDSVNQIAIKVK 249
Query: 233 DPDAIEKTHENIVRILGNG-----------VVVIDWQQRYQIFFSCYE 269
D ++ + I++ N V + + FF+ +
Sbjct: 250 SLDDLQNCKKEILKEFRNPDFENEIGYSASFSVRTIAEEQENFFTALK 297
>gi|163802117|ref|ZP_02196013.1| hypothetical protein 1103602000573_AND4_03829 [Vibrio sp. AND4]
gi|159174258|gb|EDP59066.1| hypothetical protein AND4_03829 [Vibrio sp. AND4]
Length = 375
Score = 97.9 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/240 (23%), Positives = 95/240 (39%), Gaps = 6/240 (2%)
Query: 31 ISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFI 90
+S G+ IGVMAL+ V+SVMNGF + +R+LG+ H V+ Q
Sbjct: 1 MSTAGITIGVMALVTVLSVMNGFESQLKERILGVLPHAVVSQHDGKTPVNGGAVPPFIAN 60
Query: 91 PDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGV 150
I + V S+ + + GI + N G +S+ V
Sbjct: 61 MSTIAKPEPIVRGEAVIQSSAQLTAGYLIGIEPKLGDPISNHL--IAGRLSSLQAGEYNV 118
Query: 151 IIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMS 210
+G LAR L +S+GDK+ ++ I S+ + D D ++ ++
Sbjct: 119 FLGHSLARALKVSMGDKVRLMVTNATQFTPLGRIPSQRNFTVAGIFNTGSDVDGQLMIVN 178
Query: 211 LQEAQLYFNLENA-VSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ +A L VSG VF DP + + + + L G DW+++ F +
Sbjct: 179 MTDASKLMRLPKETVSGWRVFFADPFTVTEFAD---KPLPEGWQWSDWREQRGELFQAVK 235
>gi|228469891|ref|ZP_04054830.1| efflux ABC transporter, permease protein [Porphyromonas uenonis
60-3]
gi|228308526|gb|EEK17314.1| efflux ABC transporter, permease protein [Porphyromonas uenonis
60-3]
Length = 402
Score = 97.9 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 45/266 (16%), Positives = 98/266 (36%), Gaps = 4/266 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
R +AWRYLF+++K I+I + +S + + + M +I V+S+ NG+ + ++ +V+G+
Sbjct: 1 MRLPFFIAWRYLFAHKKLGAINIVTRVSVLAIAVVSMTMICVLSIYNGYEQMILDKVVGL 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ ++I + D + + I + + P V G+ VS +S
Sbjct: 61 DPQLLITKGDEAPFDQSVVTQEIHTIKGIKAIAPLVWGEGLVSRSEGESFSAAHLYGVDS 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + Y + + N D + I P +
Sbjct: 121 SYLRISQMDKYLYSGDIAIHPGQYNLGASIAINLNTIAHDTDPLIITLPKRKGYINPIMP 180
Query: 185 RSKSYTVLGMFRMRFPDYD---NGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKT 240
+ G+ + + ++M L E + L EN G+ + + +
Sbjct: 181 MTSLRRSQGVPVSVLFTDNVVYDNSIFMPLSELRSLLMLDENQAHGLALQLAEGADEGAV 240
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFS 266
+ I LG+ +V + ++
Sbjct: 241 QKAIATTLGDEYIVRNRPEQQPHLMR 266
>gi|262394763|ref|YP_003286617.1| lipoprotein releasing system transmembrane protein LolC [Vibrio sp.
Ex25]
gi|262338357|gb|ACY52152.1| lipoprotein releasing system transmembrane protein LolC [Vibrio sp.
Ex25]
Length = 374
Score = 97.9 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 56/240 (23%), Positives = 101/240 (42%), Gaps = 7/240 (2%)
Query: 31 ISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFI 90
+S G+ IGVMAL+ V+SVMNGF + +R+LG+ H V+ Q + + +
Sbjct: 1 MSTAGITIGVMALVTVLSVMNGFESQLKERILGVLPHAVVSQHDGKTPLTESAPPFVQAM 60
Query: 91 PDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGV 150
+ P V G+A + + +G L+ S G +S+ V
Sbjct: 61 SSESEPEPIVRGEAVIQSSAQLTAGYLIGIEPKKGD---PISNHLIAGRLSSLQAGDYNV 117
Query: 151 IIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMS 210
+G LAR+L +S+GDK+ ++ I S+ + D D ++ ++
Sbjct: 118 FLGHSLARSLKVSMGDKVRLMVTNATQFTPLGRIPSQRNFTVAGIFNTGSDVDGQLMIVN 177
Query: 211 LQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ +A + VSG VF DP + + + + +G DW+++ F +
Sbjct: 178 MTDASKLMRFPKDTVSGWRVFFSDPFMVTDFAD---QPMPDGWQWSDWREQRGELFQAVK 234
>gi|254796537|ref|YP_003081373.1| lipoprotein releasing system transmembrane protein LolE
[Neorickettsia risticii str. Illinois]
gi|254589774|gb|ACT69136.1| lipoprotein releasing system transmembrane protein LolE
[Neorickettsia risticii str. Illinois]
Length = 405
Score = 97.9 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 75/268 (27%), Positives = 125/268 (46%), Gaps = 10/268 (3%)
Query: 3 IFS-RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+F + E+ +A YL S +F + +F+S +GV IGV +LIVV SVM+GF+ ++I +
Sbjct: 1 MFIIKLELELACSYLISK---SFRGLVTFLSLVGVAIGVASLIVVTSVMDGFKAELISNI 57
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+G++GHV I + D I + IP V V + +S+ + V V
Sbjct: 58 VGVSGHVNIWFQRGINEDVTRIRSIATGIP---HVAKVVPALEARAIISNELTNVGVLVR 114
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+++ S D G++IG +A LG+S+GD++ LS T +G
Sbjct: 115 GMELNDFVRESLVTEKIIQGKVADFEDGIVIGARMAEELGVSVGDEVKFLSASYTNTMLG 174
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
R K + +F + +YD+ +VYM A +F E + I F+ DP
Sbjct: 175 PIPRMKHLKIAAIFALGLVEYDSALVYMPFNVASTFFRSEMNTASI--FLDDPYFASDVS 232
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
E I + L + + V +WQ +F +
Sbjct: 233 ERIKQKLPD-LHVTNWQDVGNPYFRALK 259
>gi|156973820|ref|YP_001444727.1| hypothetical protein VIBHAR_01530 [Vibrio harveyi ATCC BAA-1116]
gi|156525414|gb|ABU70500.1| hypothetical protein VIBHAR_01530 [Vibrio harveyi ATCC BAA-1116]
Length = 374
Score = 97.5 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 58/240 (24%), Positives = 103/240 (42%), Gaps = 7/240 (2%)
Query: 31 ISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFI 90
+S G+ IGVMAL+ V+SVMNGF + +R+LG+ H V+ Q + + +
Sbjct: 1 MSTAGITIGVMALVTVLSVMNGFEAQLKERILGVLPHAVVSQHDGKTPMSETAPQFIQNM 60
Query: 91 PDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGV 150
+ K P V G+A + + +G L+ S G +S+ V
Sbjct: 61 STIAKPEPIVRGEAVIQSSAQLTAGYLIGI---EPKLGDPISNHLIAGRLSSLQAGEYKV 117
Query: 151 IIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMS 210
+G LAR+L +S+GDK+ ++ I S+ + D D ++ ++
Sbjct: 118 FLGHSLARSLKVSMGDKVRLMVTNATQFTPLGRIPSQRNFTVAGIFNTGSDVDGQLMIVN 177
Query: 211 LQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ +A L + VSG VF DP + + + + + G DW+++ F +
Sbjct: 178 MTDASKLMRLPKDTVSGWRVFFSDPFMVTEFAD---KPMPEGWQWSDWREQRGELFQAVK 234
>gi|91225268|ref|ZP_01260436.1| hypothetical protein V12G01_20913 [Vibrio alginolyticus 12G01]
gi|91189907|gb|EAS76179.1| hypothetical protein V12G01_20913 [Vibrio alginolyticus 12G01]
Length = 374
Score = 97.5 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/240 (23%), Positives = 101/240 (42%), Gaps = 7/240 (2%)
Query: 31 ISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFI 90
+S G+ IGVMAL+ V+SVMNGF + +R+LG+ H V+ Q + + +
Sbjct: 1 MSTAGITIGVMALVTVLSVMNGFESQLKERILGVLPHAVVSQHDGKTPMTESAPPFVQAM 60
Query: 91 PDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGV 150
+ P V G+A + + +G L+ S G +S+ V
Sbjct: 61 SSESQPEPIVRGEAVIQSSAQLTAGYLIGIEPKKGD---PISNHLIAGRLSSLQAGDYNV 117
Query: 151 IIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMS 210
+G LAR+L +SIGDK+ ++ I S+ + D D ++ ++
Sbjct: 118 FLGHSLARSLKVSIGDKVRLMVTNATQFTPLGRIPSQRNFTVSGIFNTGSDVDGQLMIVN 177
Query: 211 LQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ +A + VSG VF DP + + + + +G DW+++ F +
Sbjct: 178 MTDASKLMRFPKDTVSGWRVFFSDPFMVTDFAD---QPMPDGWEWSDWREQRGELFQAVK 234
>gi|296273448|ref|YP_003656079.1| hypothetical protein Arnit_1918 [Arcobacter nitrofigilis DSM 7299]
gi|296097622|gb|ADG93572.1| protein of unknown function DUF214 [Arcobacter nitrofigilis DSM
7299]
Length = 402
Score = 97.5 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 59/268 (22%), Positives = 107/268 (39%), Gaps = 9/268 (3%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ ++ V +YL ++KN FISI++ ++F+GV +GVM LI+ M++MNG ++ ++
Sbjct: 1 MNNQLINFVVKKYLKFDKKNPFISISAILAFVGVAVGVMVLIITMAIMNGTEKEFKDKLF 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+N + + + + N L+ +K P++S QA V G++
Sbjct: 61 TMN-YPLSVYAKFGNGINDNLLNHLEKKFPNLKFSPYISSQAIVQHDEKISGGLIFGVDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ V N +D G+ L + L+P G
Sbjct: 120 KREAKINSIYAKATKNLVLNKYDLITGIGTSDKLYLYDDSKVTMYFTSLNPNGFSMM--- 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDA-IEKT 240
+ K + G F YDN +Y S + ++ GI ++ D I+
Sbjct: 177 -PKMKRFNYKGSFSSGLNAYDNSYMYTSAAALRTILRKKDDYYDGIHIYSNDAFNDIKLL 235
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + + V VI W Q+ FFS
Sbjct: 236 EKELQKY--PSVGVIGWWQQNGNFFSAM 261
>gi|146282980|ref|YP_001173133.1| lipoprotein releasing system transmembrane protein LolE
[Pseudomonas stutzeri A1501]
gi|145571185|gb|ABP80291.1| lipoprotein releasing system transmembrane protein LolE
[Pseudomonas stutzeri A1501]
Length = 374
Score = 97.5 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 56/227 (24%), Positives = 99/227 (43%), Gaps = 1/227 (0%)
Query: 43 LIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSG 102
+I+V+SVMNGF+ +M R+LG+ H + PL D+Q +A RL P ++ + P
Sbjct: 1 MIMVLSVMNGFQREMSARILGMVPHATVIG-EQPLDDWQAVAARLSAHPQIVGMAPVTQL 59
Query: 103 QAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGI 162
+ +S S + ++ G++ GVIIG AR G+
Sbjct: 60 EGMLSFKGSMQPIQISGIDPQAEAQVSIVGERLVGGSLDALKPGEYGVIIGLMTARRFGL 119
Query: 163 SIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN 222
+GDK+ ++ P +P G+ R + V+G+F++ + + AQ++ +
Sbjct: 120 KLGDKLTLIVPEVSSSPGGVTPRMQRLNVVGVFKVGADLDGSLGMIHRADAAQIHRWMPQ 179
Query: 223 AVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
V G+ + + D + + LG G V DW FS +
Sbjct: 180 QVQGVRLKLDDLYRAPEVAAQVQATLGKGYRVEDWSYTQGSLFSAMK 226
>gi|255322637|ref|ZP_05363781.1| efflux ABC transporter, permease protein [Campylobacter showae
RM3277]
gi|255300198|gb|EET79471.1| efflux ABC transporter, permease protein [Campylobacter showae
RM3277]
Length = 398
Score = 97.5 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 58/266 (21%), Positives = 113/266 (42%), Gaps = 11/266 (4%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ ++YL ++ FI +++ ++F+GV +G+M LIV M++MNGF ++ +++ +
Sbjct: 1 MNLTKYLLFKYLRFDKTQPFIMLSALLAFLGVGVGLMVLIVAMAIMNGFDKEFERKLFTM 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N + + + + L +K P++ Q + G +S G+L S
Sbjct: 61 N-YPITILSAIRGNIDESDVSELKQKFPNLKFSPYIMSQVIIKGANSFEGGLLFGVNSAD 119
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + + G +++G+ + + I+ DK+ ++ D + +
Sbjct: 120 EKQINS----VVAAGLEDRELDGYSLLVGQGVKNEIMINENDKLTLIFTKNDPSGFALTP 175
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPD-AIEKTHE 242
+ K + V+ F YD +Y S++ + E GI VF DP IEK
Sbjct: 176 KMKRFDVVSSFSSGLVAYDKSYLYTSVEALRKILEYDEGKFDGIHVFSNDPFADIEKISR 235
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCY 268
+ LG I W Q+ FFS
Sbjct: 236 ELR--LGQ--KAIGWWQQNGNFFSAL 257
>gi|323343543|ref|ZP_08083770.1| hypothetical protein HMPREF0663_10305 [Prevotella oralis ATCC
33269]
gi|323095362|gb|EFZ37936.1| hypothetical protein HMPREF0663_10305 [Prevotella oralis ATCC
33269]
Length = 410
Score = 97.5 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 52/273 (19%), Positives = 94/273 (34%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F + VA RYLFS + I+I S IS IGV + MAL++V+SV NGF + + +
Sbjct: 1 MNFPLFVARRYLFSKKSTNAINIISIISVIGVAVATMALVIVLSVFNGFSDLVASFLTNF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + I V + + + ++ V V G+ ++
Sbjct: 61 DPQLKIVPVQGKTVPTDDPVLERIKHFEAVAIATECMEDQALATYQDKQQMVTVMGVDDN 120
Query: 125 DFSYLQNSFSRFYGNVSNDF-----DRGKGVIIGKDLARNLGISIGDKINILSPYGD--- 176
+ GV + + L K+ G
Sbjct: 121 FSELTHIKEILYGDGEFELHAANLQYGVIGVRLAQLLGTGARWQGYIKVYAPKRNGQLDL 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
P + +F + YD + SL A+ F + +S +E+ +K
Sbjct: 181 SNPYDGFTVDSLLSPGVVFAVNQAKYDKDHIITSLAFARNLFGQQGRISSLELRLKAGAD 240
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+K + + +I G V+D ++ F +
Sbjct: 241 FDKAKKQLQQIAGTKYRVLDRFEQQADTFRIMQ 273
>gi|255535784|ref|YP_003096155.1| Lipoprotein releasing system transmembrane protein lolC
[Flavobacteriaceae bacterium 3519-10]
gi|255341980|gb|ACU08093.1| Lipoprotein releasing system transmembrane protein lolC
[Flavobacteriaceae bacterium 3519-10]
Length = 402
Score = 97.1 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 32/272 (11%), Positives = 92/272 (33%), Gaps = 6/272 (2%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+A RYL + + + ++ ++++ + + + A+ +++SV +G + +
Sbjct: 1 MKNTPFYIARRYLLAKKGSTAVTFITWLAALAMTVATTAMFIIISVFSGLEDLNQDLIAN 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
++ + ++ K + A ++ I V + G +RG+
Sbjct: 61 LHADLTLKSKTGKTLPSIEKAEKILQAEPEIAHFSKVIEEKVYINFRENGDIANLRGVD- 119
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
S + + + F V++ L L I +G+ + + GM
Sbjct: 120 SAYVLVNPIDKNIFYGSYPSFKYSNEVLLENKLDNRLSIPVGESSEVANLMMPKPGTGMI 179
Query: 184 IRSKSYTVLGMFRM----RFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIE 238
+ + + D + + ++ ++ +L I + +K+P +
Sbjct: 180 SKEEDIFNKRDIFVSGVFPGNDQLDNTIISPIELSRELLDLPKESAYQIVIKLKNPYHTD 239
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ LG ++ + F+ +
Sbjct: 240 AVKARLQNKLGAKYILTTKSEENAAFWKMINT 271
>gi|291277303|ref|YP_003517075.1| putative Lipoprotein release system protein [Helicobacter mustelae
12198]
gi|290964497|emb|CBG40349.1| putative Lipoprotein release system protein [Helicobacter mustelae
12198]
Length = 405
Score = 97.1 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/268 (21%), Positives = 102/268 (38%), Gaps = 6/268 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + ++YL +R FISI + ++F+GV IGVM L+V M++MNG ++ K++
Sbjct: 1 MSKNLTGFLIFKYLRFDRTQPFISITAILAFLGVGIGVMVLLVAMAIMNGMSKEFEKKLF 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+N + + +D + L + L F
Sbjct: 61 VMNYPLSLFATSSKGID----ESVLIALEKRFPHLLFSPYLQMQVVARKNYEMSAGVIFG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + + +I+GK L + GDK+ + + T +
Sbjct: 117 VDMQREARINEIFAKAYDAKNLQGNFPIIVGKGLYEKFLLRQGDKLTLFFTKLEPTGLVF 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDP-DAIEKT 240
K + V G+F YD G +Y SL N+ N GI ++ P +E
Sbjct: 177 SPVMKRFDVSGVFESGLRAYDVGYLYTSLNTLAKIRNIPPNHYDGIHIYSTHPMQDLESV 236
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + I G+ V W Q+ FF+
Sbjct: 237 RQALKEIPHFGIGVEGWWQQNGNFFAAM 264
>gi|152993073|ref|YP_001358794.1| hypothetical protein SUN_1486 [Sulfurovum sp. NBC37-1]
gi|151424934|dbj|BAF72437.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 408
Score = 97.1 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 59/267 (22%), Positives = 110/267 (41%), Gaps = 12/267 (4%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
RF + YL +++N FI I++ ++F G+ GVM L++ M VMNG +++ K++ +
Sbjct: 12 KRFVGHIIKHYLKYDKENPFIFISALLAFFGIAAGVMVLMIAMGVMNGTQQEFTKKLFVM 71
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N + + V+ + PD+ + + + + GS +
Sbjct: 72 NYPLTVLPIEENAVNIDLVKELSRKFPDMKFSPYYTTQVITKNDGAVQGSLLYGVDYDKE 131
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + + D V+IG+ L+ + GDK+ + G
Sbjct: 132 ------SQLNDVFRKARGDGKSKFKVVIGEGLSYEMNAMKGDKVTLYFSEQTAAGFGTMP 185
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDP-DAIEKTHE 242
K + V G+F+ YD ++Y +L+ + E G+ ++ K+P D IEK +
Sbjct: 186 LQKRFVVDGVFKSGLKAYDKAIMYTTLEAFEKLLKREVGYYDGLHIYSKNPVDDIEKVRK 245
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
L VV+ W + FFS E
Sbjct: 246 Q----LPPSVVIEGWWMQNGNFFSAME 268
>gi|195952832|ref|YP_002121122.1| protein of unknown function DUF214 [Hydrogenobaculum sp. Y04AAS1]
gi|195932444|gb|ACG57144.1| protein of unknown function DUF214 [Hydrogenobaculum sp. Y04AAS1]
Length = 400
Score = 96.8 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 63/264 (23%), Positives = 115/264 (43%), Gaps = 8/264 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A RYL S + + FI S ISF G++I +++ V GF++++ ++LG +
Sbjct: 5 ALKIAIRYLLSFKGSTFI--ISLISFFGIVISTAGILLTNGVFEGFQDNLRIKLLGSMPN 62
Query: 68 VVIQQKYYPLV-DYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
+++ D + L+ IK+ + S S V V + +
Sbjct: 63 LILTYVGDNSKADIPKVLGLLEKNKKDIKMFSYFKIYHGAIQRGSYISAVNVDAMDFGNT 122
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
L ++ G++ KGVI+GKDLA LG+S GD ++I+SP G TP G +
Sbjct: 123 KNLSFFANKIKGSL-----DKKGVILGKDLAAMLGVSKGDYVSIISPVGVQTPFGYMPKV 177
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
++ V+G D D V M A F +E+ +K+P +++
Sbjct: 178 QNLPVVGTLNSGIFDIDYSTVLMDNSVADKLFVNNPPTRVVEINLKNPFYAPSFAKSLKP 237
Query: 247 ILGNGVVVIDWQQRYQIFFSCYES 270
++G ++ W + F ++
Sbjct: 238 MIGEKFIITTWIDMNKPLFEALQT 261
>gi|260768912|ref|ZP_05877846.1| lipoprotein releasing system transmembrane protein LolC [Vibrio
furnissii CIP 102972]
gi|260616942|gb|EEX42127.1| lipoprotein releasing system transmembrane protein LolC [Vibrio
furnissii CIP 102972]
Length = 374
Score = 96.8 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 56/239 (23%), Positives = 96/239 (40%), Gaps = 7/239 (2%)
Query: 31 ISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFI 90
+S G+ IGVMAL+ V+SVMNGF + R+LG+ VI Q + +
Sbjct: 1 MSTAGITIGVMALVTVLSVMNGFEAQLKSRILGVLPQAVISQAQDKTALTDTAPAFIRAL 60
Query: 91 PDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGV 150
+ P V +A + S +G++V N G +++ + V
Sbjct: 61 STQREPEPIVRSEAVIQSASQLSAGLMVGIAPNQHD---PIGDYLIAGRLASLMEGEYRV 117
Query: 151 IIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMS 210
+G LARNL +S+GDK+ ++ I S+ + D D ++
Sbjct: 118 FLGHTLARNLNVSVGDKVRLMVTSASQFTPLGRIPSQRNFTVAGIFNTGSDVDGQLMITH 177
Query: 211 LQEAQLYFNLENA-VSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ +A ++ VSG +F DP + + + L +G DW+ + F
Sbjct: 178 IHDAGKLLRFDDQTVSGWRLFFNDPFVVGELSKT---ALPDGWQWSDWRDQRGELFQAV 233
>gi|254304222|ref|ZP_04971580.1| lipoprotein ABC superfamily ATP binding cassette transporter
membrane protein [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148324414|gb|EDK89664.1| lipoprotein ABC superfamily ATP binding cassette transporter
membrane protein [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 389
Score = 96.8 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 45/262 (17%), Positives = 87/262 (33%), Gaps = 14/262 (5%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
E +A + +F +K S +S +GV IG+ LIV + V NG ++MI +L +
Sbjct: 2 IEFFIAKKQMFERKKQ------SILSIVGVFIGITVLIVSLGVSNGLDKNMINSILSLTS 55
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
H+ + + + V + V+ +
Sbjct: 56 HITVYSPENIQDYEEISKDIETLKGVKGVVPTIETQGIVKYEGGIEPYVAGVKVVGYDLE 115
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
++ Y K ++ + K S + +
Sbjct: 116 KAVKTMNLDKYIIDGKIDFEDKKGVL--------IGNELAKATGASVGDKIKLITSEETD 167
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
V G+F+ F +YD MV + L AQ +N V + V + +P ++ ++ R
Sbjct: 168 LEMNVAGIFQSGFYEYDINMVLIPLTTAQYITYSDNTVGRLSVRLDNPYDAQEIVFDVAR 227
Query: 247 ILGNGVVVIDWQQRYQIFFSCY 268
L + W ++ + S
Sbjct: 228 KLPETYFIGTWGEQNKALLSAL 249
>gi|57237769|ref|YP_179017.1| permease, putative [Campylobacter jejuni RM1221]
gi|57166573|gb|AAW35352.1| permease, putative [Campylobacter jejuni RM1221]
gi|315058380|gb|ADT72709.1| Lipoprotein releasing system transmembrane protein LolC
[Campylobacter jejuni subsp. jejuni S3]
Length = 401
Score = 96.4 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 50/269 (18%), Positives = 114/269 (42%), Gaps = 10/269 (3%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + ++YL +++ FI+++ ++F+GV +G+ L+V M++MNGF ++ KR
Sbjct: 1 MNKSVLKYLLFKYLRFDKEQPFINLSMLLAFLGVCVGLCVLLVAMAIMNGFDKEFEKRFF 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+N + + + + L + P++S Q V + G ++ G++
Sbjct: 61 VMN-YPITILPKFYAPVNDEFIDELRKTFPNLLFSPYISTQVVVK-GDNRFEGGVLFGVN 118
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+D + ++ + + +++G L G+ DK++++ + + +
Sbjct: 119 FNDEKKINEVVAKALKDENLSGFD---ILVGSALTDEFGLHKNDKLSLIFSNLNPSGFSL 175
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN--AVSGIEVFVKDPDAIEKT 240
++K + V F YD +Y + + + GI V+ + K
Sbjct: 176 IPQTKRFDVKARFTSGLAFYDKAYMYTDVDALKKVLGMPKNPNYDGIHVYSDNAF---KD 232
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
E I L + V+ W ++ + FFS E
Sbjct: 233 VEKIKSYLKDDYAVVGWWEQNKNFFSALE 261
>gi|153952422|ref|YP_001398238.1| permease, putative [Campylobacter jejuni subsp. doylei 269.97]
gi|152939868|gb|ABS44609.1| putative permease [Campylobacter jejuni subsp. doylei 269.97]
Length = 401
Score = 96.4 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 50/269 (18%), Positives = 114/269 (42%), Gaps = 10/269 (3%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + ++YL +++ FI+++ ++F+GV +G+ L+V M++MNGF ++ KR
Sbjct: 1 MNKSVLKYLLFKYLRFDKEQPFINLSMLLAFLGVCVGLCVLLVAMAIMNGFDKEFEKRFF 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+N + + + + L + P++S Q V + G ++ G++
Sbjct: 61 VMN-YPITILPKFYTPVNDEFIDELRKTFPNLLFSPYISTQVVVK-GDNRFEGGVLFGVN 118
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+D + ++ + + +++G L G+ DK++++ + + +
Sbjct: 119 FNDEKKINEVLAKALKDENLSGFD---ILVGSALTDEFGLHKNDKLSLIFSNLNPSGFSL 175
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN--AVSGIEVFVKDPDAIEKT 240
++K + V F YD +Y + + + GI V+ + K
Sbjct: 176 VPQTKRFDVKARFTSGLAFYDKAYMYTDVDALKKVLGMPRNPNYDGIHVYSDNAF---KD 232
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
E I L + V+ W ++ + FFS E
Sbjct: 233 VEKIKSYLKDDYAVVGWWEQNKNFFSALE 261
>gi|148926134|ref|ZP_01809820.1| putative integral membrane protein [Campylobacter jejuni subsp.
jejuni CG8486]
gi|145845613|gb|EDK22705.1| putative integral membrane protein [Campylobacter jejuni subsp.
jejuni CG8486]
Length = 401
Score = 96.4 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 53/269 (19%), Positives = 117/269 (43%), Gaps = 10/269 (3%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + ++YL +++ FI+++ ++F+GV +G+ L+V M++MNGF ++ KR
Sbjct: 1 MNKSVLKYLLFKYLRFDKEQPFINLSMLLAFLGVCVGLCVLLVAMAIMNGFDKEFEKRFF 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+N + I K+Y V+ +FI P+++ V + G ++ G++
Sbjct: 61 VMNYPITILPKFYAPVNDEFIDELRKTFPNLLF--SPYLSTQVVVKGDNRFEGGVLFGVN 118
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+D + ++ + + +++G L G+ DK++++ + + +
Sbjct: 119 FNDEKKINEVVAKALKDENLSGFD---ILVGSALTDEFGLHKNDKLSLIFSNLNPSGFSL 175
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN--AVSGIEVFVKDPDAIEKT 240
++K + V F YD +Y + + + GI V+ + K
Sbjct: 176 VPQTKRFDVKARFTSGLAFYDKAYMYTDVDALKKVLGIPKNPNYDGIHVYSDNAF---KD 232
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
E I L + V+ W ++ + FFS E
Sbjct: 233 VEKIKSYLKDDYAVVGWWEQNKNFFSALE 261
>gi|256844927|ref|ZP_05550385.1| lipoprotein releasing system transmembrane protein LolE
[Fusobacterium sp. 3_1_36A2]
gi|256718486|gb|EEU32041.1| lipoprotein releasing system transmembrane protein LolE
[Fusobacterium sp. 3_1_36A2]
Length = 389
Score = 96.4 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 50/262 (19%), Positives = 93/262 (35%), Gaps = 14/262 (5%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
E +A + +F +K S +S +GV IG+ LIV + V NG ++MI +L +
Sbjct: 2 IEFFIAKKQMFERKKQ------SILSIVGVFIGITVLIVSLGVSNGLDKNMINSILSLTS 55
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
H+ + + I I+ + V G +
Sbjct: 56 HITVYSPENISDYEE--------ISKEIETIKGVKGVVPTIETQGIVKYEGGIEPYVAGV 107
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ + ++ D G I +D L + K + + +
Sbjct: 108 KVVGYDLEKAVKTMNLDKYIIDGKIDLEDKKGVLIGNELAKATGATVGDKIKLITSEETD 167
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
V+G+F+ F +YD MV + L AQ +N V + V + +P +K ++ R
Sbjct: 168 LEMNVVGIFQSGFYEYDINMVLIPLTTAQYITYSDNTVGRLSVRLDNPYDAQKLVIDVAR 227
Query: 247 ILGNGVVVIDWQQRYQIFFSCY 268
L + W ++ + S
Sbjct: 228 KLPETFYIGTWGEQNKALLSAL 249
>gi|86150650|ref|ZP_01068872.1| permease, putative [Campylobacter jejuni subsp. jejuni CF93-6]
gi|88596019|ref|ZP_01099256.1| permease, putative [Campylobacter jejuni subsp. jejuni 84-25]
gi|218562560|ref|YP_002344339.1| putative permease [Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|85838911|gb|EAQ56178.1| permease, putative [Campylobacter jejuni subsp. jejuni CF93-6]
gi|88190860|gb|EAQ94832.1| permease, putative [Campylobacter jejuni subsp. jejuni 84-25]
gi|112360266|emb|CAL35061.1| putative permease [Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|284926174|gb|ADC28526.1| putative permease [Campylobacter jejuni subsp. jejuni IA3902]
gi|315927898|gb|EFV07221.1| permease family protein [Campylobacter jejuni subsp. jejuni
DFVF1099]
gi|315929287|gb|EFV08499.1| permease family protein [Campylobacter jejuni subsp. jejuni 305]
Length = 401
Score = 96.4 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 53/269 (19%), Positives = 117/269 (43%), Gaps = 10/269 (3%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + ++YL +++ FI+++ ++F+GV +G+ L+V M++MNGF ++ KR
Sbjct: 1 MNKSVLKYLLFKYLRFDKEQPFINLSMLLAFLGVCVGLCVLLVAMAIMNGFDKEFEKRFF 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+N + I K+Y V+ +FI P+++ V + G ++ G++
Sbjct: 61 VMNYPITILPKFYAPVNDEFIDELRKTFPNLLF--SPYLSTQVVVKGDNRFEGGVLFGVN 118
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+D + ++ + + +++G L G+ DK++++ + + +
Sbjct: 119 FNDEKKINEVVAKALKDENLSGFD---ILVGSALTDEFGLHKNDKLSLIFSNLNPSGFSL 175
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN--AVSGIEVFVKDPDAIEKT 240
++K + V F YD +Y + + + GI V+ + K
Sbjct: 176 VPQTKRFDVKARFTSGLAFYDKAYMYTDVDALKKVLGIPKNPNYDGIHVYSDNAF---KD 232
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
E I L + V+ W ++ + FFS E
Sbjct: 233 VEKIKSYLKDDYAVVGWWEQNKNFFSALE 261
>gi|254458004|ref|ZP_05071431.1| lipoprotein release system transmembrane protein [Campylobacterales
bacterium GD 1]
gi|207085397|gb|EDZ62682.1| lipoprotein release system transmembrane protein [Campylobacterales
bacterium GD 1]
Length = 400
Score = 96.4 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 58/268 (21%), Positives = 113/268 (42%), Gaps = 9/268 (3%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + R+L + + FI +++ ++F+G+ +GVM L++ M++MNGF ++ K++
Sbjct: 1 MKTSIVPYLVKRFLRFDNEQPFIFLSALLAFLGITLGVMVLLIAMALMNGFDKEFKKKLT 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+N + + K+Y V+ + + P++ A ++ + G + GI+
Sbjct: 61 IMNYPLTVIPKFYGAVNEDLLIDLESRFPELKF--SPYVQSAVMARSGTKLEGGYIFGIN 118
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
D + + + V+IGK L + DK+ + + + + +
Sbjct: 119 FKDEAKVNSVLGEAIE---KSSFSKFDVLIGKSLKDEFNLYTDDKLMYIFTHVEPGGLSI 175
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ K + V G+F YD Y +L Q + N GI VF DP +
Sbjct: 176 TPKIKRFKVKGIFDSGLSAYDKAYSYTTLSSMQSMLGIPSNQYDGIHVFSNDP-HADIVK 234
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
I IL V V W + FF+ E
Sbjct: 235 --IKEILPVSVTVKGWWEDNVNFFAALE 260
>gi|296327486|ref|ZP_06870032.1| lipoprotein ABC superfamily ATP binding cassette transporter,
permease protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296155312|gb|EFG96083.1| lipoprotein ABC superfamily ATP binding cassette transporter,
permease protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 389
Score = 96.0 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 51/262 (19%), Positives = 91/262 (34%), Gaps = 14/262 (5%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
E +A + +F +K S +S +GV IG+ LIV + V NG ++MI +L +
Sbjct: 2 IEFFIAKKQMFERKKQ------SILSIVGVFIGITVLIVSLGVSNGLDKNMINSILSLTS 55
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
H+ + + I I+ + V G S
Sbjct: 56 HITVYSPENISDYEE--------ISKDIETIKGVKGVVPTIETQGIVKYEGGIEPYVSGV 107
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ + + D G I +D L + K + + +
Sbjct: 108 KVVGYDLEKAIKTMKLDTYIIDGKIDLEDKKGVLIGNELAKATGATVGDKIKLITSEETD 167
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
V G+F+ F +YD MV + L AQ +N V + V + +P +K ++ R
Sbjct: 168 LEMNVAGIFQSGFYEYDINMVLIPLTTAQYITYSDNTVGRLSVRLDNPYDAQKLVLDVAR 227
Query: 247 ILGNGVVVIDWQQRYQIFFSCY 268
L + W ++ + S
Sbjct: 228 KLPETYFIGTWGEQNKALLSAL 249
>gi|315180608|gb|ADT87522.1| hypothetical ABC transporter integral membrane subunit [Vibrio
furnissii NCTC 11218]
Length = 374
Score = 96.0 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 56/239 (23%), Positives = 96/239 (40%), Gaps = 7/239 (2%)
Query: 31 ISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFI 90
+S G+ IGVMAL+ V+SVMNGF + R+LG+ VI Q + +
Sbjct: 1 MSTAGITIGVMALVTVLSVMNGFEAQLKSRILGVLPQAVISQAQDKTALTDTAPAFIRAL 60
Query: 91 PDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGV 150
+ P V +A + S +G++V N G +++ + V
Sbjct: 61 STQREPEPIVRSEAVIQSASQLSAGLMVGIAPNQHD---PIGDYLIAGRLASLMEGEYRV 117
Query: 151 IIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMS 210
+G LARNL +S+GDK+ ++ I S+ + D D ++
Sbjct: 118 FLGHTLARNLNVSVGDKVRLMVTSASQFTPLGRIPSQRNFTVAGIFNTGSDVDGQLMITH 177
Query: 211 LQEAQLYFNLENA-VSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ +A ++ VSG +F DP + + + L +G DW+ + F
Sbjct: 178 IHDAGKLLRFDDQTVSGWRLFFNDPFVVGELSKT---ALPDGWQWSDWRDQRGELFQAV 233
>gi|157415204|ref|YP_001482460.1| permease, putative [Campylobacter jejuni subsp. jejuni 81116]
gi|157386168|gb|ABV52483.1| permease, putative [Campylobacter jejuni subsp. jejuni 81116]
gi|307747846|gb|ADN91116.1| Permease, putative [Campylobacter jejuni subsp. jejuni M1]
gi|315931226|gb|EFV10197.1| permease family protein [Campylobacter jejuni subsp. jejuni 327]
Length = 401
Score = 96.0 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 50/269 (18%), Positives = 114/269 (42%), Gaps = 10/269 (3%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + ++YL +++ FI+++ ++F+GV +G+ L+V M++MNGF ++ KR
Sbjct: 1 MNKSVLKYLLFKYLRFDKEQPFINLSMLLAFLGVCVGLCVLLVAMAIMNGFDKEFEKRFF 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+N + + + + L + P++S Q V + G ++ G++
Sbjct: 61 VMN-YPITILPKFYAPVNDEFIDELRKTFPNLLFSPYISTQVVVK-GDNRFEGGVLFGVN 118
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+D + ++ + + +++G L G+ DK++++ + + +
Sbjct: 119 FNDEKKINEVVAKALRDENLSGFD---ILVGSALIDEFGLHKNDKLSLIFSNLNPSGFSL 175
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN--AVSGIEVFVKDPDAIEKT 240
++K + V F YD +Y + + + GI V+ + K
Sbjct: 176 VPQTKRFDVKARFTSGLAFYDKAYMYTDVDALKKVLGMPKNPNYDGIHVYSDNAF---KD 232
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
E I L + V+ W ++ + FFS E
Sbjct: 233 VEKIKSYLKDDYAVVGWWEQNKNFFSALE 261
>gi|32265817|ref|NP_859849.1| hypothetical protein HH0318 [Helicobacter hepaticus ATCC 51449]
gi|32261866|gb|AAP76915.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
Length = 417
Score = 96.0 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 61/278 (21%), Positives = 110/278 (39%), Gaps = 13/278 (4%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ RYL ++ FISI + ++F GV IGVM L V M++MNG ++ +++
Sbjct: 1 MKTLIFYLLPRYLRFDKTQPFISITALLAFFGVGIGVMVLCVAMAIMNGMTKEFERKLSI 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+N + + I L P++ QA ++ + ++
Sbjct: 61 MN-YPLSIYSTTYEGVDANILQALKAHFPQFLFSPYLRYQAVGKIGNTMSAAMVFGVDMQ 119
Query: 124 ----------SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSP 173
F QNS + F N+ + + ++IGK + N G+ GDK+++
Sbjct: 120 AESQINAVVKKAFKTSQNSDTEFKKNIESFMQKEFSILIGKSMEENFGLESGDKLDLFFT 179
Query: 174 YGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAV-SGIEVFVK 232
+ + +K +++ G F YD VY +L Q +L + GI ++
Sbjct: 180 QLEPSGFSYTPINKRFSIAGFFESGLRAYDEAYVYTNLSALQKIRHLNEGIYDGIHIYTP 239
Query: 233 DP-DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+P I + + V W Q+ FFS E
Sbjct: 240 NPMQDIHSISDFLNTQFPYRAGVEGWWQQNGNFFSALE 277
>gi|222824138|ref|YP_002575712.1| conserved hypothetical integral membrane protein, permease
[Campylobacter lari RM2100]
gi|222539360|gb|ACM64461.1| conserved hypothetical integral membrane protein, putative permease
[Campylobacter lari RM2100]
Length = 400
Score = 96.0 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 48/267 (17%), Positives = 108/267 (40%), Gaps = 9/267 (3%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + ++YL ++ FI ++ ++F+GV IG+ L+V M++MNGF ++ +++
Sbjct: 1 MQKSIPRYLLFKYLRFDKDQPFIMLSKILAFLGVSIGLCVLLVAMAIMNGFDKEFERKLF 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+N + + + I L + P+++ Q G ++ G++
Sbjct: 61 TMN-YPITILPRFGASVDDKILQELRIKFPNLLFSPYIATQVIARN-DLKLEGGMLFGVN 118
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
D + ++ N D +++GK L G+ +KI ++ + + + +
Sbjct: 119 FEDEKKINEVIAQALENKKLDNFD---ILVGKGLKDEFGLDYNEKITLIFSNLNASGLSL 175
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ K + V F YD +Y ++ + + G+ V+ P +
Sbjct: 176 IPQVKRFDVKADFSSGLLAYDKAYMYTDVKALAKILSYPQGSYDGVHVYSNKPF---EDI 232
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ I LG I W ++ FF+
Sbjct: 233 KQIEDFLGARYASIGWWEQNGNFFAAL 259
>gi|319952941|ref|YP_004164208.1| hypothetical protein Celal_1397 [Cellulophaga algicola DSM 14237]
gi|319421601|gb|ADV48710.1| protein of unknown function DUF214 [Cellulophaga algicola DSM
14237]
Length = 400
Score = 96.0 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 39/271 (14%), Positives = 91/271 (33%), Gaps = 5/271 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F + +A RY+ S K + ++I + ++F ++IG AL +V+S +G + +
Sbjct: 1 MNFPLYIAKRYVRSKSKQSAVNIINLVTFCVIVIGSAALFIVLSGFSGLKTFSLSYTNSF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + + I ++G+ +
Sbjct: 61 DPDLKASPATGKFFKITDRQEDQLAALEGITAYAKELEDRVYLSHKQKDHIAYIKGVDAN 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + G N+ G+ I L+ ++ ++ G + G
Sbjct: 121 YTQVTGIDSTLYIGTWFNEQQVVTGIGIANLLSLSINSYRSPLEILVPKAGTQSLTQQGP 180
Query: 185 RSKSYTVLGMFRMRFP----DYDNGMVYMSLQEAQLYFNLEN-AVSGIEVFVKDPDAIEK 239
+K + + + D D V+ L Q ++ +SGI + D +
Sbjct: 181 NAKFFNTIPVVVSGVYAVEADLDTKYVFADLPLVQALLEKDSTQISGINFKYANTDNAQS 240
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYES 270
T + I ILG +++ + ++ + +
Sbjct: 241 TRKEIQAILGKDIILKNRKELNSTLYRMLNT 271
>gi|300775163|ref|ZP_07085025.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
gi|300505903|gb|EFK37039.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
Length = 401
Score = 95.6 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 31/272 (11%), Positives = 95/272 (34%), Gaps = 6/272 (2%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+A RYL + + + ++ ++++ + + V A+ V++SV +G + +
Sbjct: 1 MKNIAFYIASRYLLAKKGSTAVTFITWLAVGAMTVAVAAMFVIISVFSGLEDLNKDLISN 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
++ + ++ + R+ I V + + G +RG+
Sbjct: 61 LHADLTLKSTSGKTIKNLDNVTRILSKNKEISSFSRVIEEKVYISFNGKGDIAYLRGVD- 119
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
S + + + F V++ L L I + + + + G+
Sbjct: 120 SAYVNVNPINKEVFYGTYPSFKYSNEVLMENSLDNRLSIPVDSSNHYATIFMPKPGTGII 179
Query: 184 IRSKSYTVLGMFRM----RFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIE 238
+ + + D + + ++ A+ +L I + +K+P+ +
Sbjct: 180 SKEEDIYNKRDILVTGVFPGKDQLDNYIISPIELAEELLSLPKKSAYQIVIKLKNPENAD 239
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
++++ +G + + ++ F+ +
Sbjct: 240 AVKQSLLSSIGKNIEIKTKEEENAAFWKMINT 271
>gi|332045254|gb|EGI81447.1| protein of unknown function DUF214 [Lacinutrix algicola 5H-3-7-4]
Length = 404
Score = 95.6 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 40/270 (14%), Positives = 85/270 (31%), Gaps = 4/270 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RYL S N I+ ++I+ G+++G +L +V+S +G R+ ++ I
Sbjct: 1 MSFSYYIAKRYLRSKSSNNAINFITYIAIGGIILGAASLFIVLSGFSGLRDFTLQFTTVI 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + + D + + + + ++G+ +
Sbjct: 61 DPDLKAETTIGKSFLLTTSNEDKLNSIDGVVSYSKIVEERVIGSFDGAKQAFYIKGVDEN 120
Query: 125 DFSYLQNSFSRFYGNV---SNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ YG+ + + L + + P
Sbjct: 121 FSTINTLDSIIPYGSWLTPKTNQVVVGYGVSNNLNLGVLNYGKRLYLGVPKPGKGQISSI 180
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFN-LENAVSGIEVFVKDPDAIEKT 240
++ TV D ++ S++ AQ EN +S IE +KD
Sbjct: 181 NEAFNQVETVCVGIFTVNEKLDASHIFSSIELAQELLGYKENQISSIEFKLKDDADENIV 240
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYES 270
I +LG + + + Q +
Sbjct: 241 SSKIQDVLGKSITIKNKAQLNDSLNKMLNT 270
>gi|294785790|ref|ZP_06751078.1| lipoprotein releasing system transmembrane protein LolE
[Fusobacterium sp. 3_1_27]
gi|294487504|gb|EFG34866.1| lipoprotein releasing system transmembrane protein LolE
[Fusobacterium sp. 3_1_27]
Length = 389
Score = 95.6 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 50/262 (19%), Positives = 93/262 (35%), Gaps = 14/262 (5%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
E +A + +F +K S +S +GV IG+ LIV + V NG ++MI +L +
Sbjct: 2 IEFFIAKKQMFERKKQ------SILSIVGVFIGITVLIVSLGVSNGLDKNMINSILSLTS 55
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
H+ + + I I+ + V G +
Sbjct: 56 HITVYSPENISDYEE--------ISKEIETIKGVKGVVPTIETQGIIKYEGGIEPYVAGV 107
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ + ++ D G I +D L + K + + +
Sbjct: 108 KVVGYDLEKAVKTMNLDKYIIDGKIDLEDKKGVLIGNELAKATGATVGDKIKLITSEETD 167
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
V+G+F+ F +YD MV + L AQ +N V + V + +P +K ++ R
Sbjct: 168 LEMNVVGIFQSGFYEYDINMVLIPLTTAQYITYSDNTVGRLSVRLDNPYDAQKLVIDVAR 227
Query: 247 ILGNGVVVIDWQQRYQIFFSCY 268
L + W ++ + S
Sbjct: 228 KLPETYFIGTWGEQNKALLSAL 249
>gi|224418387|ref|ZP_03656393.1| hypothetical protein HcanM9_03820 [Helicobacter canadensis MIT
98-5491]
gi|253827705|ref|ZP_04870590.1| ABC-type transport system, permease component [Helicobacter
canadensis MIT 98-5491]
gi|313141918|ref|ZP_07804111.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|253511111|gb|EES89770.1| ABC-type transport system, permease component [Helicobacter
canadensis MIT 98-5491]
gi|313130949|gb|EFR48566.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
Length = 406
Score = 95.6 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 58/262 (22%), Positives = 111/262 (42%), Gaps = 8/262 (3%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+ +RYL N+ FISIA+ ++F+GV IGVM LIV M++MNGF ++ +++ +N + +
Sbjct: 9 FLLFRYLRFNKHQPFISIAAILAFLGVCIGVMVLIVAMALMNGFDKEFERKLFIMN-YPL 67
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR--GISNSDFS 127
+ P + L ++ PF+ QA + ++ S +
Sbjct: 68 TMIQGSPEKITKETLEDLQKNFPQLQFSPFIQTQAISKIGNHMEGAMVFGIDFEFESKIN 127
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ N VI+GK L + ++ + ++ + + K
Sbjct: 128 PIFKEAYLQSQQNQNQTKEIFSVIVGKSLKDSYRLNYQSNLLLIFTDFTPNAIQLSPTMK 187
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHENIVR 246
+ V G F+ YD G +Y SL+ Q+ NL + GI + +P +K ++
Sbjct: 188 RFVVEGFFQSGLIAYDKGYIYTSLEAMQIIKNLPKDTYDGIHIHSNNP---QKDIVSLQE 244
Query: 247 ILGNGVVVIDWQQRYQIFFSCY 268
+ ++ W ++ FF+
Sbjct: 245 AYPQ-MRIVGWWEQNGNFFAAL 265
>gi|297567367|ref|YP_003686339.1| hypothetical protein Mesil_2993 [Meiothermus silvanus DSM 9946]
gi|296851816|gb|ADH64831.1| protein of unknown function DUF214 [Meiothermus silvanus DSM 9946]
Length = 375
Score = 95.6 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 51/267 (19%), Positives = 92/267 (34%), Gaps = 29/267 (10%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
RF +A R+L R S I+ +GV +G+M L +S+ NGF + +I L
Sbjct: 1 MRFIWFLALRHLRYRRTQ------SLITLLGVAVGIMVLTTALSLTNGFTQGLIDATLRG 54
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H+ +Q +V+ + L+ + G+ +
Sbjct: 55 VPHIFLQAFDPQNAPPPK---------ANPQVVAQTPYLVTKALLTRRATSGQRAGVDVA 105
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
L R Y + R +I+G DLAR L P + + +
Sbjct: 106 TLWGLGEGAQRVYPRLDLSRLRPGSIILGSDLARQL---------GAFPGDRLFVLSVSQ 156
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ S V+G F D + +L++ Q + ++G +V +KDP+ + +
Sbjct: 157 KRISLEVVGTFHTGNALLDAENAFATLEDVQNLTDQPGTLTGYQVLLKDPEQAPQVAREL 216
Query: 245 VRILGNGVVVIDWQQRYQIFFS--CYE 269
G WQ + +
Sbjct: 217 S---GTHYFAQTWQSLNRTLIEQLALQ 240
>gi|254491410|ref|ZP_05104589.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Methylophaga thiooxidans DMS010]
gi|224462888|gb|EEF79158.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Methylophaga thiooxydans DMS010]
Length = 368
Score = 95.6 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 59/221 (26%), Positives = 109/221 (49%)
Query: 50 MNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGL 109
MNGF +++ +R+LG+ H I + L D+Q + L PD++ PFV GQA +S
Sbjct: 1 MNGFEKELKERILGMTSHAFITGQDGTLSDWQQLQASLQDNPDLVDSAPFVEGQAMLSQG 60
Query: 110 SSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN 169
S ++ + + G + D G+++GKDLA +G++ GDKI
Sbjct: 61 SRVRGTLVRGIDVELEKTVSTIGDKVIQGELEALTDGSFGIVLGKDLAIAMGVATGDKIT 120
Query: 170 ILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV 229
+++P+ TP G+ R K TV+G+F + +YD+ + M++ +A F + V+G+ +
Sbjct: 121 LITPHVSPTPAGVIPRLKRLTVVGVFEIGMYEYDSSLAIMNITDAAKLFKIPGKVTGLRL 180
Query: 230 FVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
D + N+++ + DW ++ FF ++
Sbjct: 181 EFDDVFKAPQLLRNVMQDVSTQYRGADWTYQHANFFRALKT 221
>gi|256028436|ref|ZP_05442270.1| lipoprotein releasing system transmembrane protein lolE
[Fusobacterium sp. D11]
gi|260494750|ref|ZP_05814880.1| lipoprotein releasing system transmembrane protein lolE
[Fusobacterium sp. 3_1_33]
gi|289766359|ref|ZP_06525737.1| lipoprotein releasing system transmembrane protein lolE
[Fusobacterium sp. D11]
gi|260197912|gb|EEW95429.1| lipoprotein releasing system transmembrane protein lolE
[Fusobacterium sp. 3_1_33]
gi|289717914|gb|EFD81926.1| lipoprotein releasing system transmembrane protein lolE
[Fusobacterium sp. D11]
Length = 389
Score = 95.6 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 56/262 (21%), Positives = 100/262 (38%), Gaps = 14/262 (5%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
E +A + +F +K S +S +GV IG+ LIV + V NG ++MI +L +
Sbjct: 2 IEFFIAKKQMFERKKQ------SILSIVGVFIGITVLIVSLGVSNGLDKNMINSILSLTS 55
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
H + + DY+ I+ ++ I V V+P + Q V V +
Sbjct: 56 H-ITVYSPENISDYEKISKEIETIKGVKGVVPTIETQGIVKYEGGIEPYVAGVKV----- 109
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ + ++ D G I +D L + K + +
Sbjct: 110 --VGYDLEKAVKTMNLDKYIIDGKIDLEDKKAVLIGNELAKATGAKVGDKIKLITSEETD 167
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
V G+F+ F +YD MV + L AQ +N V + V + +P +K ++ R
Sbjct: 168 LEMNVAGIFQSGFYEYDINMVLIPLTTAQYITYSDNTVGRLSVRLDNPYDAQKLVLDVAR 227
Query: 247 ILGNGVVVIDWQQRYQIFFSCY 268
L + W ++ + S
Sbjct: 228 KLPETFYIGTWGEQNKALLSAL 249
>gi|313886178|ref|ZP_07819908.1| efflux ABC transporter, permease protein [Porphyromonas
asaccharolytica PR426713P-I]
gi|312924357|gb|EFR35136.1| efflux ABC transporter, permease protein [Porphyromonas
asaccharolytica PR426713P-I]
Length = 404
Score = 95.6 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 46/271 (16%), Positives = 102/271 (37%), Gaps = 6/271 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
R + +AWRYLF+++K I+I + +S + + + M +I V+S+ NG+ + ++ +V+G+
Sbjct: 1 MRLPIFIAWRYLFAHKKLGAINIVTRVSVLAIAVVSMTMICVLSIYNGYEQMILDKVVGL 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ ++I + ++ + + I + + P V G+ VS + +S
Sbjct: 61 DPQLLITKGDEAPLNQGVVTQEIRSIKGIRSIAPLVWGEGLVSRMEGESFSAAHLYGVDS 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + N Y + L N D + I P +
Sbjct: 121 TYLRIANMERYLYSGDIAIHSGQYNLGASIALNLNTIAHDTDPLVITLPKRKGYINPIMP 180
Query: 185 RSKSYTVLGMFRMRFPDYD---NGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKT 240
+ G+ + + +++ L E + L EN G+ + + +
Sbjct: 181 MTSLRRSQGVPVSVLFTDNVVYDNSIFIPLSELRSLLMLDENQAHGLALQLDEGADEGAI 240
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFS--CYE 269
+ I LG +V + ++ E
Sbjct: 241 QKAIATKLGEEYLVRNRPEQQPHLMRLVAIE 271
>gi|19703916|ref|NP_603478.1| lipoprotein releasing system transmembrane protein lolE
[Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|19714086|gb|AAL94777.1| Lipoprotein releasing system transmembrane protein lolE
[Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
Length = 389
Score = 95.6 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 50/262 (19%), Positives = 91/262 (34%), Gaps = 14/262 (5%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
E +A + +F +K S +S +GV IG+ LIV + V NG ++MI +L +
Sbjct: 2 IEFFIAKKQMFERKKQ------SILSIVGVFIGITVLIVSLGVSNGLDKNMINSILSLTS 55
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
H+ + + I I+ + V G +
Sbjct: 56 HITVYSPENISDYEE--------ISKDIETIKGVKGVVPTIETQGIVKYEGGIEPYVAGV 107
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ + ++ D G I +D L + K + +
Sbjct: 108 KVVGYDLEKAVKTMNLDKYIIDGKIDLEDKKAILIGNELAKATGAKVGDKIKLITSEETD 167
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
V G+F+ F +YD MV + L AQ +N V + V + +P +K ++ R
Sbjct: 168 LEMNVAGIFQSGFYEYDINMVLIPLTTAQYITYSDNTVGRLSVRLDNPYNAQKLVIDVAR 227
Query: 247 ILGNGVVVIDWQQRYQIFFSCY 268
L + W ++ + S
Sbjct: 228 KLPETFYIGTWGEQNKALLSAL 249
>gi|86150730|ref|ZP_01068946.1| permease, putative [Campylobacter jejuni subsp. jejuni 260.94]
gi|86152564|ref|ZP_01070769.1| permease, putative [Campylobacter jejuni subsp. jejuni HB93-13]
gi|315124440|ref|YP_004066444.1| permease, putative [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
gi|85841900|gb|EAQ59146.1| permease, putative [Campylobacter jejuni subsp. jejuni 260.94]
gi|85843449|gb|EAQ60659.1| permease, putative [Campylobacter jejuni subsp. jejuni HB93-13]
gi|315018162|gb|ADT66255.1| permease, putative [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
Length = 401
Score = 95.2 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 49/269 (18%), Positives = 114/269 (42%), Gaps = 10/269 (3%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + ++YL +++ FI+++ ++F+GV +G+ L+V M++MNGF ++ KR
Sbjct: 1 MNKSVLKYLLFKYLRFDKEQPFINLSMLLAFLGVCVGLCVLLVAMAIMNGFDKEFEKRFF 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+N + + + + L + P++S Q V + G ++ G++
Sbjct: 61 VMN-YPITILPKFYAPVNDEFIDELRKTFPNLLFSPYISTQVVVK-GDNRFEGGVLFGVN 118
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+D + ++ + + +++G L G+ DK++++ + + +
Sbjct: 119 FNDEKKINEVVAKALKDENLSGFD---ILVGSALIDEFGLHKNDKLSLIFSNLNPSGFSL 175
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN--AVSGIEVFVKDPDAIEKT 240
++K + V F YD +Y + + + G+ V+ + K
Sbjct: 176 VPQTKRFDVKARFTSGLAFYDKAYMYTDVDALKKVLGMPKNPNYDGVHVYSDNAF---KD 232
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
E I L + V+ W ++ + FFS E
Sbjct: 233 VEKIKSYLKDDYAVVGWWEQNKNFFSALE 261
>gi|307721030|ref|YP_003892170.1| hypothetical protein Saut_1110 [Sulfurimonas autotrophica DSM
16294]
gi|306979123|gb|ADN09158.1| protein of unknown function DUF214 [Sulfurimonas autotrophica DSM
16294]
Length = 400
Score = 95.2 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 55/268 (20%), Positives = 114/268 (42%), Gaps = 9/268 (3%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + R+L ++ FI I++ ++FIG+ +GVM L++ M++MNGF ++ ++
Sbjct: 1 MKKSIVSYLVKRFLRFDKDQPFIFISALLAFIGITLGVMVLLIAMALMNGFDKEFKDKLT 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+N + I K+Y V+ + + + P + + ++ S G + G++
Sbjct: 61 VMNYPLTIIPKFYGAVNNNLLIDLEEKFPSLYF--SPYIQSSVMARSGSKLEGGYLFGVN 118
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
D + + + ++ + V+IGK L + DK+ + + + +
Sbjct: 119 FEDEAKVNSVLAKAITGHTFKKFD---VLIGKSLKEEFNLHENDKLMYIFTNVEPGGLSV 175
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
+ K + V +F YD Y +L+ Q ++ N GI +F K P +
Sbjct: 176 TPKIKRFKVKSVFDSGLSAYDKAYAYTTLESMQAIEHMAANQYDGIHIFSKHP-RADILK 234
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
I + L V + W + FF+ E
Sbjct: 235 --IKKELPISVTIKGWWEDNVNFFAALE 260
>gi|118474523|ref|YP_891767.1| permease, putative [Campylobacter fetus subsp. fetus 82-40]
gi|118413749|gb|ABK82169.1| permease, putative [Campylobacter fetus subsp. fetus 82-40]
Length = 399
Score = 95.2 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 49/260 (18%), Positives = 105/260 (40%), Gaps = 9/260 (3%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+ +YL ++ FI++++ ++F+GV IG+M LIV M++MNGF ++ +++ +N +
Sbjct: 7 YLLLKYLRFDKTQPFITLSAILAFLGVSIGLMVLIVAMAIMNGFDKEFERKLFTMNYPIT 66
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
I + + P+ +S + GS + + DF+
Sbjct: 67 ILSHLKGSISNLDVDELRQKFPN-----LKLSPYISTQTILKNGSQLEGGLVFGVDFNDE 121
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
+ S + + G ++IGK + + +KI ++ T + + K +
Sbjct: 122 KEINSVIKDAIKDSIPTGFEIVIGKGIKNEFMLGENEKITLIFMQNSPTGLAIVPTMKRF 181
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ F YD Y + + ++ GI ++ ++P + + IL
Sbjct: 182 NAVADFSSGLIAYDKAYSYTDVNALRKVLGYDDDKFDGIHIYSQNPKQ-DIIK--LNDIL 238
Query: 249 GNGVVVIDWQQRYQIFFSCY 268
G + W ++ FFS
Sbjct: 239 PPGQKAVGWWEQNGNFFSAL 258
>gi|283956348|ref|ZP_06373828.1| permease, putative [Campylobacter jejuni subsp. jejuni 1336]
gi|283792068|gb|EFC30857.1| permease, putative [Campylobacter jejuni subsp. jejuni 1336]
Length = 401
Score = 95.2 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 49/269 (18%), Positives = 114/269 (42%), Gaps = 10/269 (3%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + ++YL +++ FI+++ ++F+GV +G+ L+V M++MNGF ++ KR
Sbjct: 1 MNKSVLKYLLFKYLRFDKEQPFINLSMLLAFLGVCVGLCVLLVAMAIMNGFDKEFEKRFF 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+N + + + + L + P++S Q V + G ++ G++
Sbjct: 61 VMN-YPITILPKFYAPVNDEFIDELRKTFPNLLFSPYISTQVVVK-GDNRFEGGVLFGVN 118
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+D + ++ + + +++G L G+ DK++++ + + +
Sbjct: 119 FNDEKKINEVVAKALKDENLSGFD---ILVGSALIDEFGLHKNDKLSLIFSNLNPSGFSL 175
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN--AVSGIEVFVKDPDAIEKT 240
++K + V F YD +Y + + + G+ V+ + K
Sbjct: 176 VPQTKRFDVKARFTSGLAFYDKAYMYTDVDALKKVLGMPKNPNYDGVHVYSDNAF---KD 232
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
E I L + V+ W ++ + FFS E
Sbjct: 233 VEKIKSYLKDDYAVVGWWEQNKNFFSALE 261
>gi|218513337|ref|ZP_03510177.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Rhizobium etli 8C-3]
Length = 115
Score = 94.8 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 52/100 (52%), Positives = 71/100 (71%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS FE +VAWRYL + RK AFIS+ + SF+G+M+GV LI+VM+VMNGFR +++ R+LG
Sbjct: 8 FSIFERLVAWRYLRARRKEAFISVIAGFSFVGIMLGVATLIIVMAVMNGFRTELVSRILG 67
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQ 103
INGH+++Q P DY + +RL +P V LP V GQ
Sbjct: 68 INGHMIVQPSDGPFTDYTDLTSRLAAVPGVKMALPLVEGQ 107
>gi|121613149|ref|YP_001000624.1| permease, putative [Campylobacter jejuni subsp. jejuni 81-176]
gi|87248904|gb|EAQ71867.1| permease, putative [Campylobacter jejuni subsp. jejuni 81-176]
Length = 401
Score = 94.8 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 49/269 (18%), Positives = 114/269 (42%), Gaps = 10/269 (3%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + ++YL +++ FI+++ ++F+GV +G+ L+V M++MNGF ++ KR
Sbjct: 1 MNKSVLKYLLFKYLRFDKEQPFINLSMLLTFLGVCVGLCVLLVAMAIMNGFDKEFEKRFF 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+N + + + + L + P++S Q V + G ++ G++
Sbjct: 61 VMN-YPITILPKFYAPVNDEFIDELRKTFPNLLFSPYISTQVVVK-GDNRFEGGVLFGVN 118
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+D + ++ + + +++G L G+ DK++++ + + +
Sbjct: 119 FNDEKKINEVVAKALKDENLSGFD---ILVGSALIDEFGLHKNDKLSLIFSNLNPSGFSL 175
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN--AVSGIEVFVKDPDAIEKT 240
++K + V F YD +Y + + + G+ V+ + K
Sbjct: 176 VPQTKRFDVKARFTSGLAFYDKAYMYTDVDALKKVLGMPKNPNYDGVHVYSDNAF---KD 232
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
E I L + V+ W ++ + FFS E
Sbjct: 233 VEKIKSYLKDDYAVVGWWEQNKNFFSALE 261
>gi|323496025|ref|ZP_08101088.1| hypothetical protein VISI1226_19097 [Vibrio sinaloensis DSM 21326]
gi|323318916|gb|EGA71864.1| hypothetical protein VISI1226_19097 [Vibrio sinaloensis DSM 21326]
Length = 374
Score = 94.8 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 50/239 (20%), Positives = 97/239 (40%), Gaps = 7/239 (2%)
Query: 31 ISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFI 90
+S G+ IGVM+L+ V+SVMNGF + R+LG+ ++ ++ + + +
Sbjct: 1 MSTAGITIGVMSLVTVLSVMNGFEAQLKGRILGVLPQAIVSEQDGNTPRTEIAPPFIQNL 60
Query: 91 PDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGV 150
+ P V +A + S +G+L+ + G +S+ +
Sbjct: 61 SNAGHPEPIVQSEAVIQSASQLSAGLLIGIKPSDHD---PIEEHLIAGRLSSLEAGKYQL 117
Query: 151 IIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMS 210
IG LAR++ IS+GDK+ ++ I S+ + D D ++
Sbjct: 118 FIGHTLARSMDISMGDKVRLMVTSASQFTPLGRIPSQRIFTVAGIYNTGSDVDGQLMLTH 177
Query: 211 LQEAQLYFNLENAV-SGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+++A L+ +G +F DP + + + L G DW+++ F
Sbjct: 178 IEDAAKLNRLKKQTMTGWRLFFDDPFMVTELS---QQPLPQGWQWQDWREQRGELFQAV 233
>gi|237744971|ref|ZP_04575452.1| lipoprotein releasing system transmembrane protein lolE
[Fusobacterium sp. 7_1]
gi|229432200|gb|EEO42412.1| lipoprotein releasing system transmembrane protein lolE
[Fusobacterium sp. 7_1]
Length = 389
Score = 94.8 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 50/262 (19%), Positives = 91/262 (34%), Gaps = 14/262 (5%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
E +A + +F +K S +S +GV IG+ LIV + V NG ++MI +L +
Sbjct: 2 IEFFIAKKQMFERKKQ------SILSIVGVFIGITVLIVSLGVSNGLDKNMINSILSLTS 55
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
H+ + + I I+ + V G +
Sbjct: 56 HITVYSPENISDYEK--------ISKEIETIKGVKGVVPTIETQGIVKYEGGIEPYVAGV 107
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ + ++ D G I +D L + K + +
Sbjct: 108 KVVGYDLEKAVKTMNLDKYIIDGKIDLEDKKAVLIGNELAKATGAKVGDKIKLITSEETD 167
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
V G+F+ F +YD MV + L AQ +N V + V + +P +K ++ R
Sbjct: 168 LEMNVAGIFQSGFYEYDINMVLIPLTTAQYITYSDNTVGRLSVRLDNPYNAQKLVIDVAR 227
Query: 247 ILGNGVVVIDWQQRYQIFFSCY 268
L + W ++ + S
Sbjct: 228 KLPETFYIGTWGEQNKALLSAL 249
>gi|305432081|ref|ZP_07401248.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Campylobacter coli JV20]
gi|304445165|gb|EFM37811.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Campylobacter coli JV20]
Length = 401
Score = 94.8 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 49/269 (18%), Positives = 115/269 (42%), Gaps = 10/269 (3%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + ++YL +++ FI+++ ++F+GV +G+ L+V M++MNGF ++ KR
Sbjct: 1 MKKSVLKYLLFKYLRFDKEQPFINLSMLLAFLGVCVGLCVLLVAMAIMNGFDKEFEKRFF 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+N + + + + L + P++S Q + G ++ G++
Sbjct: 61 VMN-YPITIVPKFYSPMNDDLVTELKREFPHLLFSPYISTQVVAK-ADNRFEGGVLFGVN 118
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+D + ++ + + +++G LA L + DK++++ + +
Sbjct: 119 FNDEVKINEVVAKALKDKNLSGFD---ILVGSVLADELNLHKNDKLSLIFSNLSPSGFSL 175
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA--VSGIEVFVKDPDAIEKT 240
++K + V F YD +Y + + + N G+ V+ ++ K
Sbjct: 176 VPQAKRFDVKARFTSGLIFYDKAYMYTDVNALRKVLGISNQQSYDGVHVYSENAF---KD 232
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
E + L + V+ W ++ Q FFS +
Sbjct: 233 VEKLKSYLKSDYAVVGWWEQNQNFFSALK 261
>gi|302338437|ref|YP_003803643.1| protein of unknown function DUF214 [Spirochaeta smaragdinae DSM
11293]
gi|301635622|gb|ADK81049.1| protein of unknown function DUF214 [Spirochaeta smaragdinae DSM
11293]
Length = 448
Score = 94.4 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 58/271 (21%), Positives = 111/271 (40%), Gaps = 10/271 (3%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
++ + VA+R+L S RK I SF S +G+ +GVM L+ V++VMNGF+ I+ +L I
Sbjct: 12 KKWILFVAFRFLRSRRKERKIRP-SFFSILGLAVGVMTLLSVLAVMNGFQLGFIEDILEI 70
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + D + L +P+V +PF+ Q + G SG G +R +
Sbjct: 71 GSYHIR-IYQQEDEDQTALLTLLRGMPEVEAAVPFLDVQTMIEGPFSGMVGCNIRALPED 129
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINI-----LSPYGDVTP 179
+ + + + D + +I + ++ I +
Sbjct: 130 TPAIDPGWARQMDLDDAFVTDGERDLIKPGSVWIGSVLAQNLGITTGDSVSFLSMAGDSF 189
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
G+ YTV +F + +YD+ + +++ + + + I V +K+ +
Sbjct: 190 RGLEPTKVEYTVSLIFSSGYYEYDSALAFVAHDSISAIASGKEKI-NIGVKLKNRWRDRQ 248
Query: 240 THENIVR--ILGNGVVVIDWQQRYQIFFSCY 268
E + L G V+ W+Q + FF
Sbjct: 249 FIEELSETGKLLPGTEVVSWRQYNRSFFGAL 279
>gi|325286201|ref|YP_004261991.1| hypothetical protein Celly_1292 [Cellulophaga lytica DSM 7489]
gi|324321655|gb|ADY29120.1| protein of unknown function DUF214 [Cellulophaga lytica DSM 7489]
Length = 402
Score = 94.4 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/272 (15%), Positives = 88/272 (32%), Gaps = 6/272 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F + +A RY+ S ++I +FI+F+ ++IG AL +V+S G + +
Sbjct: 1 MNFPLYIAKRYVRSKSSQNAVNIINFITFLVIVIGSAALFIVLSGFAGLKTYSLSFSESF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + + D + + + ++G+ ++
Sbjct: 61 DPDLKASPLTGKFISVLPEQETKLQNIDGVLSFSKELEEKVYFLHNEKSHIGYIKGVDSN 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ ++G D RG I +L + + IL P + G
Sbjct: 121 YNKVTSVDSTLYFGEWLLDSQRGVVGIGIANLLGLTVNNYRSPLQILVPKPKKGAVNQGG 180
Query: 185 RSKSYTVLGMFRMRFPDY-----DNGMVYMSLQEAQLYFNLEN-AVSGIEVFVKDPDAIE 238
+K+ + D ++ SL Q ++ +S I V I
Sbjct: 181 FNKTPYNQHNVVVSGMYNVAEDLDKKYLFTSLPVVQKLLEKDSLQISAINFKVDGTKNIN 240
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ I + VV+ D Q++ +
Sbjct: 241 SIKKEIAAVFNQNVVLKDRQEQNSTLHRMLNT 272
>gi|34762631|ref|ZP_00143624.1| Lipoprotein releasing system transmembrane protein lolE
[Fusobacterium nucleatum subsp. vincentii ATCC 49256]
gi|27887711|gb|EAA24787.1| Lipoprotein releasing system transmembrane protein lolE
[Fusobacterium nucleatum subsp. vincentii ATCC 49256]
Length = 389
Score = 94.4 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 49/262 (18%), Positives = 93/262 (35%), Gaps = 14/262 (5%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
E +A + +F +K S +S +GV IG+ LIV + V NG ++MI +L +
Sbjct: 2 IEFFIAKKQMFERKKQ------SILSIVGVFIGITVLIVSLGVSNGLDKNMINSILSLTS 55
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
H+ + + I I+ + V G +
Sbjct: 56 HITVYSPENISDYEE--------ISKEIETIKGVKGVVPTIETQGIVKYEGGIEPYVAGV 107
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ + ++ D G I +D L + K + + +
Sbjct: 108 KVVGYDLEKAVKTMNLDKYIIDGKIDLEDKKGVLIGNELAKATGATVGDKIKLITSEETD 167
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
V+G+F+ F +YD MV + L AQ ++ V + V + +P +K ++ R
Sbjct: 168 LEMNVVGIFQSGFYEYDINMVLIPLTTAQYITYSDSTVGRLSVRLDNPYDAQKLVIDVAR 227
Query: 247 ILGNGVVVIDWQQRYQIFFSCY 268
L + W ++ + S
Sbjct: 228 KLPETYFIGTWGEQNKALLSAL 249
>gi|330808519|ref|YP_004352981.1| Liporotein ABC transporter, permease component [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327376627|gb|AEA67977.1| Liporotein ABC transporter, permease component [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 376
Score = 94.4 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 3/228 (1%)
Query: 43 LIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSG 102
+IVV+SVMNGF +M RVLG+ H ++ + D+ +A ++ P V+ V PF
Sbjct: 1 MIVVLSVMNGFDHEMRTRVLGMVPHATLESGE-AISDWPSLAAKVKQNPQVLAVAPFTQM 59
Query: 103 QAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGI 162
Q ++ +L + G + + G++IG A LG+
Sbjct: 60 QGLLTNDGKVSKVLLNGIDPGLERQVSIIDNFMQQGKLDDLAPGSFGIVIGDKAAAKLGV 119
Query: 163 SIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLE 221
+IGDK+ ++P VTP GM R K +TV+G+F + + D + +LQ+
Sbjct: 120 AIGDKLTFVAPEVTVTPGGMFPRMKRFTVVGIFHVGAGELDGYLGVTNLQDLARLHRWKP 179
Query: 222 NAVSGIEVFVKDPDAIEKTHENIVRILGNG-VVVIDWQQRYQIFFSCY 268
+ V G+ + D + I + LG DW + + +
Sbjct: 180 DQVQGLRLKFDDLFQAPRVAWTIAQQLGEDRYYARDWTRTHGNLYQAI 227
>gi|260363822|ref|ZP_05776577.1| outer membrane-specific lipoprotein transporter subunit [Vibrio
parahaemolyticus K5030]
gi|308113883|gb|EFO51423.1| outer membrane-specific lipoprotein transporter subunit [Vibrio
parahaemolyticus K5030]
Length = 374
Score = 94.4 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 60/240 (25%), Positives = 102/240 (42%), Gaps = 7/240 (2%)
Query: 31 ISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFI 90
+S G+ IGVMAL+ V+SVMNGF + +R+LG+ H VI Q + + +
Sbjct: 1 MSTAGITIGVMALVTVLSVMNGFEAQLKERILGVLPHAVISQHDGRTPLTESAPQFIQAM 60
Query: 91 PDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGV 150
DV + P V G+A + + +G L+ + G +S+ V
Sbjct: 61 SDVAEPEPVVRGEAVIQSSAQLTAGYLIGIEPKKGD---PIANHLIAGRLSSLQAGEYKV 117
Query: 151 IIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMS 210
+G LAR+L +SIGDK+ ++ I S+ + D D ++ ++
Sbjct: 118 FLGHSLARSLKVSIGDKVRLMVTNATQFTPLGRIPSQRNFTVAGIFNTGSDVDGQLMIVN 177
Query: 211 LQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ +A L + VSG VF DP + + + + G DW+ + F +
Sbjct: 178 MADAAKLMRLPKDTVSGWRVFFSDPFMVTDFAD---KPMPEGWQWSDWRAQRGELFQAVK 234
>gi|328473271|gb|EGF44119.1| hypothetical protein VP10329_21375 [Vibrio parahaemolyticus 10329]
Length = 374
Score = 94.4 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 60/240 (25%), Positives = 102/240 (42%), Gaps = 7/240 (2%)
Query: 31 ISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFI 90
+S G+ IGVMAL+ V+SVMNGF + +R+LG+ H VI Q + + +
Sbjct: 1 MSTAGITIGVMALVTVLSVMNGFEAQLKERILGVLPHAVISQHDGRTPLTESAPQFIQAM 60
Query: 91 PDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGV 150
DV + P V G+A + + +G L+ + G +S+ V
Sbjct: 61 SDVAEPEPVVRGEAVIQSSAQLTAGYLIGIEPKKGD---PIANHLIAGRLSSLQAGEYKV 117
Query: 151 IIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMS 210
+G LAR+L +SIGDK+ ++ I S+ + D D ++ ++
Sbjct: 118 FLGHSLARSLKVSIGDKVRLMVTNATQFTPLGRIPSQRNFTVAGIFNTGSDVDGQLMIVN 177
Query: 211 LQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ +A L + VSG VF DP + + + + G DW+ + F +
Sbjct: 178 MADAAKLMRLPQDTVSGWRVFFSDPFMVTDFAD---KPMPEGWQWSDWRAQRGELFQAVK 234
>gi|110639994|ref|YP_680204.1| lipoprotein ABC transporter permease [Cytophaga hutchinsonii ATCC
33406]
gi|110282675|gb|ABG60861.1| lipoprotein ABC transporter, permease [Cytophaga hutchinsonii ATCC
33406]
Length = 407
Score = 94.1 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/266 (16%), Positives = 100/266 (37%), Gaps = 5/266 (1%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A Y FS + I++ S +S + V I M+L++ MSV NG + + +
Sbjct: 5 LFIARHYYFSGKNLLLINVISILSILVVAIITMSLVIGMSVFNGMENLIRSLYNSFDPEI 64
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
I + + ++L + + +L V V + + ++G+S + +
Sbjct: 65 KISPRTGKTFEMTDSLHKLVQSAEGVFILTEVIEDNAVISYKNETDVIKIKGVSENFTAQ 124
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLAR---NLGISIGDKINILSPYGDVTPMGMGIR 185
+ G++S IIG+ + + + I P D +
Sbjct: 125 HRMDSFLVSGSMSMFKQGRDFAIIGRGIQYKLSIPINNQFSPVQIFYPDRDKIKRPDALD 184
Query: 186 SKSYTVLGM--FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ + YD+ V++ L A+ N EN + +E+ V +E
Sbjct: 185 AFRIKSIHAGGVFAIEKQYDDNFVFVPLVFAKELMNYENERTSLEIKVSSGYEVEDVQSA 244
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ LG+ +V++ ++++ +
Sbjct: 245 LKERLGDTFLVLNSDEQHKGLLKAIK 270
>gi|237740057|ref|ZP_04570538.1| lipoprotein releasing system transmembrane protein lolE
[Fusobacterium sp. 2_1_31]
gi|229422074|gb|EEO37121.1| lipoprotein releasing system transmembrane protein lolE
[Fusobacterium sp. 2_1_31]
Length = 389
Score = 94.1 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 54/263 (20%), Positives = 105/263 (39%), Gaps = 16/263 (6%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
E +A + + +K S +S +GV IG+ LIV + V NG ++MI +L +
Sbjct: 2 IEFFIAKKQMLERKKQ------SILSIVGVFIGITVLIVSLGVSNGLDKNMINSILSLTS 55
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
H+ + + + N + V + V+ +
Sbjct: 56 HINVYSPENIPNYEELVKNIEEVKGVKGAVPTIETQGIIKYEGHGEPYVAGVKVVGYDLD 115
Query: 127 SYLQNS-FSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
++ + + D + K ++IGK+LA ++G +GDKI +++
Sbjct: 116 KAIKVMKLDDYIIDGKIDVEDKKSILIGKELAASMGAMVGDKIKLITSEETDLE------ 169
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
TV G+F+ F +YD MV + LQ AQ + V + V + +P ++ ++
Sbjct: 170 ---MTVGGIFQSGFYEYDVNMVLIPLQTAQYITYSDETVGRLSVRLDNPYDAQELIYDVA 226
Query: 246 RILGNGVVVIDWQQRYQIFFSCY 268
R L + + W ++ + S
Sbjct: 227 RKLPTDLYIGTWGEQNKALLSAL 249
>gi|283954501|ref|ZP_06372020.1| permease, putative [Campylobacter jejuni subsp. jejuni 414]
gi|283793905|gb|EFC32655.1| permease, putative [Campylobacter jejuni subsp. jejuni 414]
Length = 401
Score = 94.1 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 52/269 (19%), Positives = 114/269 (42%), Gaps = 10/269 (3%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + ++YL +++ FI+++ ++F+GV +G+ L+V M++MNGF ++ KR
Sbjct: 1 MNKSVLKYLLFKYLRFDKEQPFINLSMLLAFLGVCVGLCVLLVAMAIMNGFDKEFEKRFF 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+N + + + + L I + P++S Q V + G ++ G++
Sbjct: 61 VMN-YPITILPKFYAPVNDEFVDELRKIFPNLLFSPYISTQVVVK-ADNRFEGGVLFGVN 118
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
D + ++ + +++G LA G+ DK++++ + + +
Sbjct: 119 FDDEKKINEVVAKALKDEKLSGFD---ILVGSALADEFGLYKNDKLSLIFSNLNPSGFSL 175
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL--ENAVSGIEVFVKDPDAIEKT 240
+SK + V F YD +Y + + + GI ++ + K
Sbjct: 176 VPQSKRFNVKARFTSGLAFYDKAYMYTDVNALKKVLGILQNPNYDGIHIYSNNAF---KD 232
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
E I L + V+ W ++ + FFS E
Sbjct: 233 VEKIKSYLKDDYAVVGWWEQNKNFFSALE 261
>gi|326798756|ref|YP_004316575.1| hypothetical protein Sph21_1342 [Sphingobacterium sp. 21]
gi|326549520|gb|ADZ77905.1| protein of unknown function DUF214 [Sphingobacterium sp. 21]
Length = 408
Score = 93.7 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/261 (15%), Positives = 93/261 (35%), Gaps = 4/261 (1%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A RYLFS + I+I S IS +GV++ ALIV++SV NG ++ + +
Sbjct: 6 FIAKRYLFSKKSVNAINIISAISMVGVLVASGALIVILSVYNGLEGLILSMYSCFSSELR 65
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
I+ + + I V + + ++G+ S
Sbjct: 66 IEPASGKVFKEDTVVFEKIKKDSRIASYSQVLQEKVLLRYREYQYIANMKGVDPSYGLNR 125
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARN---LGISIGDKINILSPYGDVTPMGMGIRS 186
+ G + ++G + N +I +I + SP V
Sbjct: 126 PADNLLWDGTFVLSENGINYALLGAGVFTNLGISLNNILAEIEVFSPKKGVRSALNPADE 185
Query: 187 KSYTVLGMFRMRFPDYDNGM-VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ + + + + + + A+ + +S IE+ +K + + +++
Sbjct: 186 FNVRNIAPAGVFKAQQELDDLIIVPIGFARDVLGEYDEISAIEINLKKGADLNRVQKDLQ 245
Query: 246 RILGNGVVVIDWQQRYQIFFS 266
++LG + + ++ +
Sbjct: 246 KLLGKNYNIKNRVEQNPGLYK 266
>gi|91216161|ref|ZP_01253129.1| putative lipoprotein releasing system transmembrane protein
[Psychroflexus torquis ATCC 700755]
gi|91185678|gb|EAS72053.1| putative lipoprotein releasing system transmembrane protein
[Psychroflexus torquis ATCC 700755]
Length = 398
Score = 93.7 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/270 (15%), Positives = 90/270 (33%), Gaps = 4/270 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+A RY FS N I++ ++I+ IGV+ G +AL VV+S +G +E +
Sbjct: 1 MNISFYIAKRYFFSKSSNTAINVITWIASIGVIAGALALFVVLSAFSGLKEFSLSFTNKF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + + K + I V + + S + ++G+ +
Sbjct: 61 DPDLKVFSKVGKTFMLESSQLSALSNNPDIVRYSEVIEERVLLSFKSKNTPGFIKGVDTT 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGD---KINILSPYGDVTPMG 181
+ S F G + + ++G+ K + P
Sbjct: 121 FKTINAIKSSIFLGQWIENDAYQVVLGNDLSRKLSVGVRDYSGLLKFYVPKPGKGQILDV 180
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKT 240
+ + + D + + A+ L+ N V+ +E+ + + +
Sbjct: 181 KEAFRTANATVTGIYSINEELDKKYAFTDINFARQLLQLKQNEVTSLELQIAESADMASV 240
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ + I + V+V D Q + +
Sbjct: 241 KKEVKDIFDSQVLVKDRIQLNDSLYKMLNT 270
>gi|237741602|ref|ZP_04572083.1| lipoprotein releasing system transmembrane protein lolE
[Fusobacterium sp. 4_1_13]
gi|229429250|gb|EEO39462.1| lipoprotein releasing system transmembrane protein lolE
[Fusobacterium sp. 4_1_13]
Length = 389
Score = 93.7 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 49/262 (18%), Positives = 92/262 (35%), Gaps = 14/262 (5%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
E +A + +F +K S +S +GV IG+ LIV + V NG ++MI +L +
Sbjct: 2 IEFFIAKKQMFERKKQ------SILSIVGVFIGITVLIVSLGVSNGLDKNMINSILSLTS 55
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
H+ + + I I+ + V G +
Sbjct: 56 HITVYSPENISDYEE--------ISKEIETIKGVKGVVPTIETQGIIKYEGGIEPYVAGV 107
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ + ++ D G I +D L + K + + +
Sbjct: 108 KVVGYDLEKAVKTMNLDKYIIDGKIDLEDKKGVLIGNELAKATGATVGDKIKLITSEETD 167
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
V G+F+ F +YD MV + L AQ ++ V + V + +P +K ++ R
Sbjct: 168 LEMNVAGIFQSGFYEYDINMVLIPLTTAQYITYSDSTVGRLSVRLDNPYDAQKLVIDVAR 227
Query: 247 ILGNGVVVIDWQQRYQIFFSCY 268
L + W ++ + S
Sbjct: 228 KLPETYFIGTWGEQNKALLSAL 249
>gi|262067102|ref|ZP_06026714.1| lipoprotein releasing system transmembrane protein LolE
[Fusobacterium periodonticum ATCC 33693]
gi|291379157|gb|EFE86675.1| lipoprotein releasing system transmembrane protein LolE
[Fusobacterium periodonticum ATCC 33693]
Length = 389
Score = 93.3 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 55/263 (20%), Positives = 105/263 (39%), Gaps = 16/263 (6%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
E +A + + +K S +S +GV IG+ LIV + V NG ++MI +L +
Sbjct: 2 IEFFIAKKQMLERKKQ------SILSIVGVFIGITVLIVSLGVSNGLDKNMINSILSLTS 55
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
H+ + + + N + V + V+ +
Sbjct: 56 HINVYSPDNIPNYEELVKNIEEVKGVKGAVPTIETQGIIKYEGYGEPYVAGVKVVGYDLD 115
Query: 127 SYLQNS-FSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
++ + + D + K V+IGK+LA ++G +GDKI +++
Sbjct: 116 KAIKVMKLDDYIIDGKIDLEDKKAVLIGKELASSMGAMVGDKIKLITSEETDLE------ 169
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
TV G+F+ F +YD MV + LQ AQ + V + V + +P ++ ++
Sbjct: 170 ---MTVGGIFQSGFYEYDLNMVLIPLQTAQYITYSDETVGRLSVRLDNPYDAQELIFDVA 226
Query: 246 RILGNGVVVIDWQQRYQIFFSCY 268
R L + + W ++ + S
Sbjct: 227 RKLPTDLYIGTWGEQNRALLSAL 249
>gi|297182753|gb|ADI18908.1| ABC-type transport system, involved in lipoprotein release,
permease component [uncultured delta proteobacterium
HF0010_08B07]
Length = 460
Score = 93.3 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 50/312 (16%), Positives = 99/312 (31%), Gaps = 52/312 (16%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+FE+++A R+L S R +S+ + ++ +GV IGV ALI S+ GF +++LG+
Sbjct: 1 MKFELLLALRHLVSRRGRG-LSLVAILAVVGVAIGVAALIGGASITAGFERAFQEKLLGV 59
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
HV + + + I + + + + + G ++ I
Sbjct: 60 TAHVFARPYSNTRYEVEEIEKAIKTNVPEVVAVSPTTYHKAIFVGPGSTVGGFIKSIQPQ 119
Query: 125 D-----------------------FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLG 161
+ + K I + L
Sbjct: 120 RARQALKLESFLRSGSLELLKPPSKDRFSKNSDSMVSVIVGSQLARKLSIKEGQVFTALT 179
Query: 162 ISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE 221
+ + + G +S V+G+F + +YD+ VYM +A+ F +
Sbjct: 180 GASQKTNPHTKKHHEWNGQGNIPQSIILNVVGIFEAGYDEYDSRFVYMHYAQAEAIFGIH 239
Query: 222 NAVSGIEVFVKDPDAIEKTHENIVRILG----------------------------NGVV 253
++V G E+ + +PD I L
Sbjct: 240 DSVQGFEISLSNPDLASDLAPQIESALKWGLGDPQDWGESLALNPLKATRISTRAEENFS 299
Query: 254 VIDWQQRYQIFF 265
V W ++ +
Sbjct: 300 VQGWYEQNPALY 311
>gi|297171210|gb|ADI22218.1| ABC-type transport system, involved in lipoprotein release,
permease component [uncultured Gemmatimonadales
bacterium HF0200_34B24]
gi|297171325|gb|ADI22330.1| ABC-type transport system, involved in lipoprotein release,
permease component [uncultured actinobacterium
HF0500_01C15]
Length = 395
Score = 93.3 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 55/254 (21%), Positives = 97/254 (38%), Gaps = 12/254 (4%)
Query: 28 ASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIAN-- 85
++I+ GV +GV ALIVV++VM G +ED+ ++L HV++ ++ L +
Sbjct: 2 ITWIALGGVTVGVTALIVVIAVMTGMQEDLRDKILESTPHVIVLEQSASLRLGDWREVVD 61
Query: 86 -------RLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYG 138
+ P V+ + V + + + + ++
Sbjct: 62 SVLAVEGIVGAAPFVLSQVSVVRRSVSGQYSQPANLYGVSIDTTLAAPTDMERQIIEGAL 121
Query: 139 NVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIRSKSYTVLGMFR 196
N+ +++G LA + + GD + ++ + + + V G F
Sbjct: 122 NLDTPESGLPPLLMGIGLADRMQVFEGDSVVLMSLENLNSDIFGALTPTLREFEVTGTFA 181
Query: 197 MRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVI 255
DYD G VY +L+ AQ LE N SGI DP + + + LG V
Sbjct: 182 TGLYDYDIGNVYTNLESAQELIGLETNTASGIGARTADPGMALQVADEVSARLGYPYYVE 241
Query: 256 DWQQRYQIFFSCYE 269
W + FS E
Sbjct: 242 SWATTNRALFSALE 255
>gi|228473879|ref|ZP_04058621.1| efflux ABC transporter, permease protein [Capnocytophaga gingivalis
ATCC 33624]
gi|228274720|gb|EEK13554.1| efflux ABC transporter, permease protein [Capnocytophaga gingivalis
ATCC 33624]
Length = 402
Score = 93.3 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 36/271 (13%), Positives = 93/271 (34%), Gaps = 5/271 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ + +AWRY+ S I+I +++S ++IG +L++V++ +G R +
Sbjct: 1 MKASLFIAWRYVRSKSSQNVINIINWMSIFVLIIGGASLMIVLAGFSGLRTFSMSFSNYF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + + K + + + + + ++G+ +
Sbjct: 61 DPDLKVLPKSGKIFSLTAQQEKALSQEKTVAHYSKILEERVFLNSQGKNYIAYIKGVDEN 120
Query: 125 DFSYLQNSFSRFYGNVSN----DFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
D+ +I + +I +
Sbjct: 121 YPKVNAVDSILVLSPKEWLLSDDYVVVGNIIAETLNLGLFTSTTPLQIIVPKAGKGSITS 180
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFN-LENAVSGIEVFVKDPDAIEK 239
+ +L + D D+ V+ +L +Q EN VS IE+ + + E+
Sbjct: 181 TSTPYREETVLLSDYYQVTEDLDSKYVFTTLSLSQRLLGVKENDVSAIEIKLTKGISSEE 240
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ ++ +LG+ V+ D + + + +++
Sbjct: 241 GKKRLLSVLGSDFVIKDRMELNEDLYKMFQT 271
>gi|330942635|gb|EGH45207.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. pisi str. 1704B]
Length = 188
Score = 92.9 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 53/186 (28%), Positives = 92/186 (49%), Gaps = 1/186 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+ +FIS S S IG+ +GV+A+IVV+SVMNGF+ +M R+L
Sbjct: 1 MFRPLPIFIGMRYTRAKRRKSFISFISMTSMIGLALGVLAMIVVLSVMNGFQREMSSRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H +I P+ D++ +A+ P+V +PF + +S S +
Sbjct: 61 GMVPHALIAGNT-PVDDWKPLADAALKNPEVTAAVPFTDMEGMLSYKGSMQPIQISGVDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G++ + GV++G AR +SIGDK+ ++ P P G+
Sbjct: 120 ALEHEVSIVTQHITRGSLEDLKPGEFGVVLGDITARRFRLSIGDKLTLIVPEVSSAPGGI 179
Query: 183 GIRSKS 188
R +
Sbjct: 180 TPRMQR 185
>gi|237752609|ref|ZP_04583089.1| lipoprotein release transmembrane protein [Helicobacter
winghamensis ATCC BAA-430]
gi|229376098|gb|EEO26189.1| lipoprotein release transmembrane protein [Helicobacter
winghamensis ATCC BAA-430]
Length = 402
Score = 92.9 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 56/265 (21%), Positives = 101/265 (38%), Gaps = 14/265 (5%)
Query: 14 RYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQK 73
RYL N+ FISI + ++F+GV IGVM LIV M++MNGF ++ +++ +N + +
Sbjct: 3 RYLRFNKAQPFISITAILAFLGVSIGVMVLIVAMALMNGFDKEFERKLFIMN-YPITMVS 61
Query: 74 YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGL--------SSGGSGVLVRGISNSD 125
+ + L+ +K PF+ QA
Sbjct: 62 AGFDSPNEELLADLENNFKHLKFSPFIQTQALSKSNDSIEGAAVFGVDFARESAINPVFS 121
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ L + + +IIGK L + + ++ T + +
Sbjct: 122 EALLATERNFEKRLGETYAPKTFQIIIGKTLQEQFHLHFNSNLLLIFTQFSPTAISLTPT 181
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAV-SGIEVFVKDPDAIEKTHENI 244
K + V+G+F YD +Y +L + + V GI ++ K+P +K +
Sbjct: 182 MKRFNVVGVFNSGLVAYDKSYIYTTLDALRTIKTMPQGVYDGIHIYSKNP---QKDIIAL 238
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYE 269
V W ++ FF+ E
Sbjct: 239 KEKYPYMHFV-GWWEQNGNFFAALE 262
>gi|119357128|ref|YP_911772.1| hypothetical protein Cpha266_1317 [Chlorobium phaeobacteroides DSM
266]
gi|119354477|gb|ABL65348.1| protein of unknown function DUF214 [Chlorobium phaeobacteroides DSM
266]
Length = 423
Score = 92.9 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 57/284 (20%), Positives = 100/284 (35%), Gaps = 19/284 (6%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
R +A R+ F R + + S IG+ +G ALI+ +S++NGF + K+++
Sbjct: 1 MRTAFFIARRFAFRQRSGSKPTFIVLASVIGIAVGTAALILTLSIVNGFAVSIEKKLISF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ H+ I+Q L ++ + + S V V +
Sbjct: 61 SAHLQIRQSDDRYFAETRSDLNLITSHPEVESASPFFEKNLILKSKSATDNVDVPMVKPV 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGK--------GVIIGKDLARNLGISIGDKINILSPYGD 176
+ N + + G+ IGK LA NL + GDK+ ++
Sbjct: 121 VLKGISNIEMERFLENRLLGGARQSAANADALGLYIGKSLAENLALKTGDKVLLIGMQKG 180
Query: 177 VTPMGMGIRS-----------KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVS 225
++ +S T+ G++ + V + E +S
Sbjct: 181 TIENVGTDQAGILDLLASLDLESGTIQGIYDTGLQQGFDDFVLLGDLEKVQNRFGPGKIS 240
Query: 226 GIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
G EV V + +EKT E +V LG QRY F +
Sbjct: 241 GYEVRVDNIGLVEKTSETLVSRLGFPFFSSTVFQRYANLFEWLK 284
>gi|294782857|ref|ZP_06748183.1| lipoprotein releasing system transmembrane protein LolE
[Fusobacterium sp. 1_1_41FAA]
gi|294481498|gb|EFG29273.1| lipoprotein releasing system transmembrane protein LolE
[Fusobacterium sp. 1_1_41FAA]
Length = 389
Score = 92.9 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 52/263 (19%), Positives = 105/263 (39%), Gaps = 16/263 (6%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
E +A + + +K S +S +GV IG+ LIV + V NG ++MI +L +
Sbjct: 2 IEFFIAKKQMLERKKQ------SILSIVGVFIGITVLIVSLGVSNGLDKNMINSILSLTS 55
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
H+ + + + N + V + V+ +
Sbjct: 56 HINVYSPENIPNYEELVKNIEEVKGVKGAVPTIETQGIIKYEGHGEPYVAGVKVVGYDLD 115
Query: 127 SYLQNS-FSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
++ + + D + K ++IGK+LA ++G +GDK+ +++
Sbjct: 116 KAIKVMKLDDYIIDGKIDVEDKKSILIGKELAASMGAMVGDKVKLITSEETDLE------ 169
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
T+ G+F+ F +YD MV + LQ AQ + V + V + +P ++ ++
Sbjct: 170 ---MTIGGIFQSGFYEYDVNMVLIPLQTAQYVTYSDETVGRLSVRLDNPYDAQELIFDVA 226
Query: 246 RILGNGVVVIDWQQRYQIFFSCY 268
R L + + W ++ + S
Sbjct: 227 RKLPTDLYIGTWGEQNRALLSAL 249
>gi|255038622|ref|YP_003089243.1| hypothetical protein Dfer_4877 [Dyadobacter fermentans DSM 18053]
gi|254951378|gb|ACT96078.1| protein of unknown function DUF214 [Dyadobacter fermentans DSM
18053]
Length = 408
Score = 92.5 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 44/269 (16%), Positives = 88/269 (32%), Gaps = 6/269 (2%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+A RY FS K +FIS+ + I+ GV +G MA++VV+SV NG + K +
Sbjct: 3 ISYRIAVRYFFSRNKRSFISLIARIAMAGVAVGTMAMVVVLSVFNGMEDLNRKIFKTFDS 62
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
V I + +K++ V ++ + + + ++G+ ++
Sbjct: 63 DVRITPAEGKRFKVTPGMLQAVQTVQGVKLVTQVIEDNALARYGNQQTIIRLKGVDSTFE 122
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVII------GKDLARNLGISIGDKINILSPYGDVTPM 180
Q + G + D G I I ++ +
Sbjct: 123 KQKQLDTAMVEGTLRLIGDNGTPYAIIAEGVRNALSISLEDIFTPLELLYPRTGTRTLNL 182
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ + + + L++ + S +EV+++ A +
Sbjct: 183 TSPEAFNQLNLRPGGIFFIENRYDDYIIAPLKQVEGLMGYNQERSALEVYLRPGYAEKDV 242
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I LG VV D +
Sbjct: 243 SDQIGAKLGKAFVVKDRDSLNADLLRAIK 271
>gi|71892173|ref|YP_277905.1| outer membrane lipoproteins ABC transporter membrane protein
[Candidatus Blochmannia pennsylvanicus str. BPEN]
gi|71796279|gb|AAZ41030.1| transport protein of outer membrane lipoproteins (ABC superfamily,
membrane) [Candidatus Blochmannia pennsylvanicus str.
BPEN]
Length = 411
Score = 92.5 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 58/263 (22%), Positives = 115/263 (43%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+ +A ++ + N +S+ S IS IG+ IG+ I+ +S MNGF+ ++ R+L +
Sbjct: 3 LSLKIALKFHRGSSSNILMSLMSLISVIGITIGISISIIALSTMNGFKYELSNRILSVIP 62
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
H I+ P +++Q + + IPD+ V P+++ V + +
Sbjct: 63 HGEIEPIRAPFINWQTVLECIRKIPDISYVNPYINFYGVVEYNNKWHVVYVRSVDLKEKI 122
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ + + + +I+GK ++ +LGI +GD I +L+ + + +
Sbjct: 123 NENALMNFIEKDSWKYFCENVEKIILGKGISEDLGIKVGDWITVLTAHDFRSNNKLLSSK 182
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
K + D + MSL +AQ Y++ + VSGI + V + ++ KT I R
Sbjct: 183 KIRLQVAGILNLNSQLDCNIAIMSLSDAQHYYDETSDVSGIAIKVNNIFSVNKTLYKIQR 242
Query: 247 ILGNGVVVIDWQQRYQIFFSCYE 269
+ + V W Y + +
Sbjct: 243 MFNHQVFARSWMDTYGYIYQDIQ 265
>gi|297172325|gb|ADI23302.1| ABC-type transport system, involved in lipoprotein release,
permease component [uncultured actinobacterium
HF0770_13M05]
Length = 384
Score = 92.5 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 56/239 (23%), Positives = 100/239 (41%), Gaps = 2/239 (0%)
Query: 30 FISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDF 89
F++ G+ + V L+ V V+ GF ++ R+L + HV ++ + + +
Sbjct: 1 FVALAGLALSVSVLLFVQGVVAGFERELTNRILRVIPHVSVRARESIATSPEL-LQLIGG 59
Query: 90 IPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKG 149
IP V + GQA +S + + + + G++ G
Sbjct: 60 IPHVEGSAAVIEGQALLSLGQKVRGITITGIEPDQYRRVSRINQYVRGGDLIALNPGQYG 119
Query: 150 VIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYM 209
+I+G +LA++LG+ IG ++ P VTP+G R KS+ V G+ V++
Sbjct: 120 IIVGDNLAKDLGLKIGSSATVVVPDVTVTPLGAFPRQKSFRVQGILDTGSQLDQR-HVFL 178
Query: 210 SLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+A + L V IEV++ DP + I+ L + VV W Q Y +S
Sbjct: 179 HRLDAAKLYRLGRGVHSIEVWLDDPLLAREVGLEILATLSDEFVVSTWFQTYGPLYSAI 237
>gi|326335658|ref|ZP_08201845.1| lipoprotein ABC superfamily ATP binding cassette transporter,
membrane protein [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325692424|gb|EGD34376.1| lipoprotein ABC superfamily ATP binding cassette transporter,
membrane protein [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 400
Score = 92.5 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 38/269 (14%), Positives = 98/269 (36%), Gaps = 3/269 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ + +AWRY+ S I+I + +S +++G +L++V++ +G R +
Sbjct: 1 MKASLFIAWRYVRSKSSQNVINIINRMSIFVLIVGGASLMIVLAGFSGLRTFSMSFSNFF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + I K + + V+ V + ++G+ +
Sbjct: 61 DPDLKIFPKSGKTFTFSPDKEKALTESGVVAYYSKVLEERVFLNSRGKNYIAYIKGVDEN 120
Query: 125 DF--SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + + + D I + + + I+ P +
Sbjct: 121 YPKVNAVDSILVISPKDWLLNDDYVVVGNIIAETLNLGLFTSTTPLQIIVPKAGKGSITS 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ +L + D D+ V+ +L AQ L+ N VS +E+ + + +
Sbjct: 181 TPYREETVLLSDYYQVTEDLDSKYVFATLSLAQRLTGLQANEVSALEIKLSKGISANEGK 240
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+++ + LG+ V+ D + + +++
Sbjct: 241 KHLQKALGDSFVIKDRMALNEDLYKMFQT 269
>gi|257468304|ref|ZP_05632400.1| lipoprotein releasing system transmembrane protein lolE
[Fusobacterium ulcerans ATCC 49185]
gi|317062582|ref|ZP_07927067.1| lipoprotein releasing system transmembrane protein lolE
[Fusobacterium ulcerans ATCC 49185]
gi|313688258|gb|EFS25093.1| lipoprotein releasing system transmembrane protein lolE
[Fusobacterium ulcerans ATCC 49185]
Length = 387
Score = 92.5 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 52/262 (19%), Positives = 102/262 (38%), Gaps = 16/262 (6%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
E +A +++F ++ S IS +G+ IGV+ LIV + + NG ++MI +L +
Sbjct: 2 VEFFIAKKHIFERKRQ------SLISTLGIAIGVVVLIVSIGIANGLDKNMINSILSMTS 55
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
HV+++ + +++ IP V +P + Q G + I D
Sbjct: 56 HVLVENGDKLSNYNEL-KEKIEKIPGVKGAVPSIETQGIFKYNGIYGGYISGVKIEGFDL 114
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ + D +G I + L + S +VT + +
Sbjct: 115 ESAKKAMDL-------DKKIVEGSISPDKINGVLIGKELFRNIGASLGDEVTIISSENKE 167
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ + G+F+ + DYD M+ + L+ AQ + V+ I+V + DP + + I+
Sbjct: 168 IKFKIEGVFQSGYYDYDINMIILPLKAAQYLVYSGDTVNKIDVTLNDPYKAPEIADKIMS 227
Query: 247 ILGNGVVVIDWQQRYQIFFSCY 268
+ W + S
Sbjct: 228 E--TKIFSRTWGDLNRNLLSAL 247
>gi|182413901|ref|YP_001818967.1| hypothetical protein Oter_2084 [Opitutus terrae PB90-1]
gi|177841115|gb|ACB75367.1| protein of unknown function DUF214 [Opitutus terrae PB90-1]
Length = 411
Score = 92.5 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 46/263 (17%), Positives = 89/263 (33%), Gaps = 6/263 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ +A + LF + +FIS +GV +GV L+V SVM GF ++ + V+
Sbjct: 1 MPWYFYLALKQLFPTGRR--FPFFTFISIVGVALGVALLVVSTSVMGGFGHEIRRMVVET 58
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+Q + +D + + + + + ++GI +
Sbjct: 59 --QGEVQVRANGFIDDPAGLQQRIAKVPGVVATTAFAEGVVMLESERRPAFPGIQGIDLN 116
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + D D ++ G + +
Sbjct: 117 TVTKVVPLDRYVRVGSLEDLDDDSIILSATLAHNIGARLGGKVEVYSPLLLERLKNDEVL 176
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ TV+G+F + D+ V ++L+ Q + L++ V GI V + D ++ I
Sbjct: 177 LPRELTVVGIFEVGHQQLDSSTVIVTLRLMQDLYGLQHGVHGINVKIADGLDADEMARRI 236
Query: 245 VRILGN--GVVVIDWQQRYQIFF 265
L G V W Q F
Sbjct: 237 NAALPPESGAVARSWIDTNQDFL 259
>gi|78777242|ref|YP_393557.1| hypothetical protein Suden_1044 [Sulfurimonas denitrificans DSM
1251]
gi|78497782|gb|ABB44322.1| Protein of unknown function DUF214 [Sulfurimonas denitrificans DSM
1251]
Length = 400
Score = 92.5 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 58/268 (21%), Positives = 119/268 (44%), Gaps = 9/268 (3%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + R+L + + FI +++ ++F+G+ +GVM L++ M++MNGF + K++
Sbjct: 1 MKTSIVPYLVKRFLRFDNEQPFIFLSALLAFLGISLGVMVLLIAMALMNGFDNEFKKKLT 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+N + I K+Y V+ + + N P++ A ++ S G + G++
Sbjct: 61 IMNYPLTITPKFYGAVNEELLLNLEMKFPNLSF--SPYVQSAIMARSGSKLEGGYLFGVN 118
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + S + V+IGK L + + DK+ + + + M +
Sbjct: 119 FESEVKVNSVLKEAIKDQSFEKFD---VLIGKTLRDEFALLVDDKLMYIFTHVEPGGMNV 175
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ K ++V G+F YD Y ++ Q+ NL N SGI +F + P ++
Sbjct: 176 TPKIKRFSVKGVFDSGLSAYDKAYNYTTISSLQVMLNLPSNQYSGIHIFSQTP---QEDI 232
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L V + W + FF+ E
Sbjct: 233 IKLKEHLPQSVSIKGWWEDNVNFFAALE 260
>gi|126662575|ref|ZP_01733574.1| hypothetical protein FBBAL38_04450 [Flavobacteria bacterium BAL38]
gi|126625954|gb|EAZ96643.1| hypothetical protein FBBAL38_04450 [Flavobacteria bacterium BAL38]
Length = 399
Score = 92.1 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 39/269 (14%), Positives = 86/269 (31%), Gaps = 4/269 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+A RY S KN I+I + I+ +G++ MAL V +SV +G RE +
Sbjct: 1 MNLSFYIAKRYAVSFSKNKAINIITGIASVGIIASTMALFVFLSVFSGLREFSLNFANAS 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + I+ L + I + + + ++G+ +
Sbjct: 61 DPDLRIETVTGKTFLVTEKQEELLNKSEYIVSFSKIIEERVYFMYDNKEIFAFIKGVDDQ 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARN---LGISIGDKINILSPYGDVTPMG 181
+ + G + + + + P
Sbjct: 121 YIKITDFNKHLYAGKWFEPDSENVVIGADISRKLGLGLFDYNNALEAYVPKPGKGDIENP 180
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKT 240
+K + + D V+ S+ AQ + L+N ++ +E+ +K
Sbjct: 181 NEAFNKIALLPSGIYSINEELDGKYVFCSMNLAQQFLGLKNNEITNLEIKLKPSADENIV 240
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ ++ ILG + + + Q + +
Sbjct: 241 RKELISILGKSIKIKNRAQLNDSLYKMLQ 269
>gi|298207244|ref|YP_003715423.1| putative lipoprotein releasing system transmembrane protein
[Croceibacter atlanticus HTCC2559]
gi|83849880|gb|EAP87748.1| putative lipoprotein releasing system transmembrane protein
[Croceibacter atlanticus HTCC2559]
Length = 398
Score = 92.1 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 45/270 (16%), Positives = 89/270 (32%), Gaps = 4/270 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RYLF+ KN I+I S I+ IGV G +AL +V+S +G ++ +
Sbjct: 1 MNFSYYIAKRYLFTKSKNNAINIISLIATIGVFAGALALFIVLSGFSGLKDFSLSFTNEF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + + + + + + I V + ++G+
Sbjct: 61 DPDLKLLPEQGKTIVVDSLLQEKISEVEGIVAYSKVIEERVFLDFREKNQMAFIKGVDER 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGK---GVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
S S FYG +D I ++ + P
Sbjct: 121 FKSVNAIDSSLFYGTWLSDKPSHVVLGNGISQSLSLGTYDYGSTLRLMVPKPGKGQITNP 180
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKT 240
+ +V+ + DN V+ SL AQ L+ N S +E+ + +
Sbjct: 181 TDAFNAKQSVVSDIYSINEELDNKYVFSSLAFAQELLELDANEFSALEIKLSPTAKEDDV 240
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYES 270
++ + + + + Q + +
Sbjct: 241 RASLNNLFDKPINIKNRIQLNDKLYKMLNT 270
>gi|20091320|ref|NP_617395.1| hypothetical protein MA2489 [Methanosarcina acetivorans C2A]
gi|19916448|gb|AAM05875.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 389
Score = 92.1 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 54/267 (20%), Positives = 109/267 (40%), Gaps = 21/267 (7%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+E+ +A R +FS R+ F + + V + V + V+M++++GF+++++ + N
Sbjct: 2 YELKIALRQVFSRRRQTF------FAILAVALAVTVITVMMAMLSGFQDELVTSSIENNP 55
Query: 67 HVVIQQKY---YPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
H+VI + + Y++ ++ + VI V P GQ + + L
Sbjct: 56 HIVINPQDEEEEFIHLYRYTSDLIAEKEGVIAVSPKYLGQVALEYRDNAEGVSLQGVDPM 115
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
++ + ++ S G+ G+++G LA NL + +GD+++ + P
Sbjct: 116 AEENVMRVSEDVIEGDFMTLVHTRYGILLGDQLAENLEVHVGDRVDAVFPGSQT------ 169
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ + D Y L Q +FN VS I V V DP + +
Sbjct: 170 ----TSFKVVGLINTGTAEDEVTAYARLDSVQDFFNEPGVVSTIGVRVVDPYQADIIAGS 225
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYES 270
I R G+ + W + + E+
Sbjct: 226 IERE--TGLDAVSWIEENAEILNLLET 250
>gi|313680872|ref|YP_004058611.1| hypothetical protein Ocepr_1987 [Oceanithermus profundus DSM 14977]
gi|313153587|gb|ADR37438.1| protein of unknown function DUF214 [Oceanithermus profundus DSM
14977]
Length = 375
Score = 92.1 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 46/267 (17%), Positives = 83/267 (31%), Gaps = 29/267 (10%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
RF +A ++L + S I+ +GV GV L +S+ NGF +I+ L
Sbjct: 1 MRFAWFLALKHLTYRKTQ------SLITVLGVAAGVAVLTTALSLTNGFTAGLIEATLRA 54
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
HV + + P +I L+ G+
Sbjct: 55 VPHVTLTALDPEDAPRPEHPEIVAETPVLIAKAL----------LTRRAGEGRRAGVDFG 104
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ +R Y + + GVI+G L + P V + +
Sbjct: 105 TLIGVGPGAARVYPGLGLEALTPGGVILGSAL---------ARSLGAWPGDTVYALSVNQ 155
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + + V+G F D+ + L + Q AV G + + DP+ + +
Sbjct: 156 QRRPFRVIGRFVTGNYLIDSVFAFAPLADVQALLETPGAVGGWHLRLADPEKAPEVARAL 215
Query: 245 VRILGNGVVVIDWQQRYQIFFS--CYE 269
V WQ + +
Sbjct: 216 EA--DGRYVAQTWQDANRTLIEQLALQ 240
>gi|20091321|ref|NP_617396.1| hypothetical protein MA2490 [Methanosarcina acetivorans C2A]
gi|19916449|gb|AAM05876.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 392
Score = 91.8 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 48/269 (17%), Positives = 102/269 (37%), Gaps = 23/269 (8%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
R+E+ +A R +++ + + + +S + + VM L V +VM GF ++ +
Sbjct: 4 MRYELFIALRQIWARK------VQTLLSVGAIALAVMVLTVSQAVMVGFTGELYNTTVNK 57
Query: 65 NGH--VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H V ++ + Y+ + + I V + PF++G+A ++ + L I
Sbjct: 58 LPHVSVSPEEGEDYIYLYRTLIEDISKIEGVTAISPFLAGKASFRFKTNSLNAELKGVIP 117
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G+ V+IG LA L +++G+ +++ P +
Sbjct: 118 LEENEISSIESDMVEGDFRELEFSRNTVVIGSKLADKLEVNLGESVDVSFPNAKSLSLR- 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ D + Y SL AQ ++++ + ++GI V + D + +
Sbjct: 177 ---------VVGIFHTGSSLDESLTYTSLDTAQEFYDVPDVINGISVRLADFNRDREVAA 227
Query: 243 NIVRILGNGVVVIDWQQRYQIFFS--CYE 269
I + G V W + E
Sbjct: 228 EIRK---TGYKVKGWTESNPEILRTIAIE 253
>gi|189346759|ref|YP_001943288.1| hypothetical protein Clim_1242 [Chlorobium limicola DSM 245]
gi|189340906|gb|ACD90309.1| protein of unknown function DUF214 [Chlorobium limicola DSM 245]
Length = 422
Score = 91.8 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 43/279 (15%), Positives = 96/279 (34%), Gaps = 18/279 (6%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A R+ F R + + S IG+ +G ALI+ +S++ GF + +++ H+
Sbjct: 5 FYIARRFAFRERTGSKPAFIVLASVIGIAVGTAALILTLSIVKGFAGSVENKLISFTSHI 64
Query: 69 VIQQKYYPLVDYQFIANR-------LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
++Q R + ++ V + +G V+++GI
Sbjct: 65 QVRQSDEEYFSESRYVQRQISGSRGIASASPFLEKSFIVRSRPAKNGNRPPVKPVILKGI 124
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGIS-----------IGDKINI 170
S + + + + +GK LA L + K I
Sbjct: 125 SADERKIFLKRYLVDEKKTPDISANTISLYLGKTLAEKLQVKSGEKILLAGLDRSTKEGI 184
Query: 171 LSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVF 230
L D+ + + ++ + G++ + + M+ + + +SG ++
Sbjct: 185 LDGNQDIIELLSSLDLETGLIKGIYDTGLQEGFDDMIIIGDLDEMQQRFHPGLISGYDIQ 244
Query: 231 VKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
V+D ++ N+ L +RY F +
Sbjct: 245 VQDLQQLDAIARNLAARLAYPFYTFTVFERYANLFEWLK 283
>gi|297171256|gb|ADI22263.1| ABC-type transport system, involved in lipoprotein release,
permease component [uncultured Gemmatimonadales
bacterium HF0200_36I24]
gi|297171360|gb|ADI22364.1| ABC-type transport system, involved in lipoprotein release,
permease component [uncultured nuHF2 cluster bacterium
HF0500_02A10]
Length = 386
Score = 91.4 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 56/246 (22%), Positives = 98/246 (39%), Gaps = 9/246 (3%)
Query: 33 FIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRL--DFI 90
GV +GV ALI+ + VM+G +ED++ ++L + HV++ ++ L + + +
Sbjct: 1 MGGVTVGVTALIITIGVMSGMQEDLMGKILDSSPHVIVLKQGSSLRMDNWNEIVVATHEV 60
Query: 91 PDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGV 150
V+ V P V VS L ++ + + R + N G+
Sbjct: 61 KGVVGVSPLVLTNVAVSRSGYTQPADLYGVSLDTVGPAVTDIEGRIQNGIHNLETTASGL 120
Query: 151 I---IGKDLARNLGISIGDKINI--LSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNG 205
+G LA + + GD + + R + Y + G F DYD
Sbjct: 121 PAVILGSRLAARMSLFSGDTVTVVSFENLNVDVMGMPTPRLRQYEMTGTFTTGMYDYDIK 180
Query: 206 MVYMSLQEAQLYFNL--ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQI 263
+Y+SL+EAQ + +N +S + V DPD + I LG + W +
Sbjct: 181 NIYVSLEEAQGQLGIFEKNQISMLGVRTDDPDQASGIAQAIQEKLGPEFYAVSWSTTNRA 240
Query: 264 FFSCYE 269
FS +
Sbjct: 241 LFSALK 246
>gi|253583705|ref|ZP_04860903.1| lipoprotein releasing system transmembrane protein lolE
[Fusobacterium varium ATCC 27725]
gi|251834277|gb|EES62840.1| lipoprotein releasing system transmembrane protein lolE
[Fusobacterium varium ATCC 27725]
Length = 387
Score = 91.4 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 54/262 (20%), Positives = 102/262 (38%), Gaps = 16/262 (6%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
E +A +++F ++ S IS +G+ IGV+ LIV + + NG ++MI +L +
Sbjct: 2 VEFFIAKKHIFERKRQ------SLISTLGIAIGVIVLIVSIGIANGLDKNMISSILSMTS 55
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
HV+++ R++ IP V +P + Q G + I D
Sbjct: 56 HVLVENGDKLSDYNDL-KERIEKIPGVKGAVPSIETQGIFKYNGIYGGYISGVKIEGFDL 114
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ + + D +G I + L K S +VT + +
Sbjct: 115 ESAKKAMNL-------DKKIVEGSISPDKMNGILIGKELFKNIGASLGDEVTIISSENKE 167
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ + G+F+ + DYD M+ + L+ AQ + V+ I+V + DP + + I+
Sbjct: 168 IKFKIEGVFQSGYYDYDINMIILPLKAAQYLVYSGDTVNKIDVTLNDPYKAPEIADKIMT 227
Query: 247 ILGNGVVVIDWQQRYQIFFSCY 268
+ W + S
Sbjct: 228 E--TKIFSRTWGDLNRNLLSAL 247
>gi|78188887|ref|YP_379225.1| ABC transporter permease [Chlorobium chlorochromatii CaD3]
gi|78171086|gb|ABB28182.1| probable ABC transporter permease protein [Chlorobium
chlorochromatii CaD3]
Length = 413
Score = 91.0 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/275 (14%), Positives = 101/275 (36%), Gaps = 8/275 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + +A R+ F+ ++ I+ S I+ G+ IGV L+VV+SV+NGF+E L
Sbjct: 1 MCMKPALWIALRFSFARKRFRIINFISAITLAGITIGVATLLVVLSVLNGFQELARTFFL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ V + + + + + + + + V+++G+S
Sbjct: 61 SLESPVQLVSSHNNAITVTPALLASIRTLEGVATAEPYAEGEALLATQNKSELVMLKGLS 120
Query: 123 NSDFSYLQNSFSRF---YGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ +LQN + + + + + + + + + +++
Sbjct: 121 PTAHQHLQNYINAPQPLFTDSTIAVGELLALRSSLYPNQPIQLFSPELLSLGLESLTQPY 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+ + ++ +F + D + Q+ +N +GIE+ K E
Sbjct: 181 LIAALTIPRTSLHTIFSIHKLFDDRYALSSLPLARQVLLLGDNNYTGIEIRGKHGVKGET 240
Query: 240 THENIVRIL-----GNGVVVIDWQQRYQIFFSCYE 269
+ + L + +++YQ FS +
Sbjct: 241 LQRTLQQWLTKEGVEKSYRIRTLEEKYQSVFSVMQ 275
>gi|208434698|ref|YP_002266364.1| lipoprotein release system transmembrane protein [Helicobacter
pylori G27]
gi|208432627|gb|ACI27498.1| lipoprotein release system transmembrane protein [Helicobacter
pylori G27]
Length = 396
Score = 91.0 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 59/256 (23%), Positives = 106/256 (41%), Gaps = 2/256 (0%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
+ ++ FISI + ++F GV +GVM LIV M++MNG ++ K++ +N + +
Sbjct: 1 MRFDKSQPFISITALLAFFGVAVGVMVLIVAMAIMNGMSKEFEKKLFVMNYPLTLYTTSP 60
Query: 76 PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSR 135
+ + + P+++ + S S G V S + +
Sbjct: 61 YGISEEVVQALEKKFPNLLFSPYLQTQSLIKSAHSMNGGVVFGVDFSKERRINEVLNDAL 120
Query: 136 FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMF 195
N ++ F +I+GK L +L + + K ++ + T + + K +T+ G F
Sbjct: 121 KNTNTNDLFKNPFNLIVGKSLRYSLNLDLNQKADLFFTELEPTGLTLSPIMKRFTIKGDF 180
Query: 196 RMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDP-DAIEKTHENIVRILGNGVV 253
YD +Y SLQ L G+ V+ K P IE + I +G+
Sbjct: 181 DSGLKSYDMSYMYASLQAISAIRRLPLGLYDGVHVYSKTPMKDIENLRNALKTINHHGIG 240
Query: 254 VIDWQQRYQIFFSCYE 269
+ W Q+ FFS E
Sbjct: 241 IEGWWQQNGNFFSAME 256
>gi|294054811|ref|YP_003548469.1| protein of unknown function DUF214 [Coraliomargarita akajimensis
DSM 45221]
gi|293614144|gb|ADE54299.1| protein of unknown function DUF214 [Coraliomargarita akajimensis
DSM 45221]
Length = 411
Score = 91.0 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 61/268 (22%), Positives = 119/268 (44%), Gaps = 7/268 (2%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ + A + LF + + F S +F+S +GVM+GV LI+V SVMNGF E + +++
Sbjct: 1 MMPWYLYHALKQLFPSGR--FFSFFTFMSIVGVMLGVCVLIIVQSVMNGFGEGIRSKMVE 58
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
G + + D++ ++ + +VI V P+ G + + +
Sbjct: 59 TYGD-IRVLSPDLIPDWEGEFAAVEAMDEVIGVAPYAEGVVMLQYRNQPQFPGIRGIDPW 117
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT-PMGM 182
+ + + S G+ + +GV +G+ LA LG+ GD + + +P
Sbjct: 118 EEETVIPVSSFITVGD--LEDFDDEGVFLGEGLAYALGVGPGDVVEVFTPLMLERLKEDE 175
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + +TVLGMF+ R P D + +L+ Q + L+++V G+ + ++ + +
Sbjct: 176 VLLPREFTVLGMFKTRSPTVDENTMICTLRVMQELYGLDDSVHGVVMKLRPGVDADVFAQ 235
Query: 243 NIV-RILGNGVVVIDWQQRYQIFFSCYE 269
+ IL I W+ + F E
Sbjct: 236 RLEREILNPMYRAISWRAANRDFLFAIE 263
>gi|319760526|ref|YP_004124464.1| lipoprotein-releasing system transmembrane protein lolE [Candidatus
Blochmannia vafer str. BVAF]
gi|318039240|gb|ADV33790.1| lipoprotein-releasing system transmembrane protein lolE [Candidatus
Blochmannia vafer str. BVAF]
Length = 414
Score = 90.6 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 54/270 (20%), Positives = 111/270 (41%), Gaps = 5/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + +A R+ ++N S+ S +S I + +G+ I++ S++NGF ++ KR+L
Sbjct: 1 MF--LSLRIALRFYQGGKRNILASLISLVSVIVIGVGIAVSIIIFSIINGFEYELSKRIL 58
Query: 63 GINGH-VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
I H + PL++++ I + IP VI P++ + + + +
Sbjct: 59 SIVPHGEITTVNNIPLINWKEILTYVIKIPQVINASPYIHFSSIIKFHNKWHLVYIKSVN 118
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVII--GKDLARNLGISIGDKINILSPYGDVTP 179
++ + + + F S I G+ ++ L I GD I +
Sbjct: 119 LLNNVNIYDHVLTNFIEKDSWKRFCENKNQIILGEGVSIALNIKEGDWITVFLVNNFNLD 178
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+ + + + DN + +SL +AQ Y+N V GIE V + I+K
Sbjct: 179 NRLALTKQVSLQVSGILKLHSYLDNSLAIISLLDAQNYYNNRLGVDGIEFSVNNVFHIKK 238
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+N+ ++ + + W Y + +
Sbjct: 239 IIKNMKFMINKNIKISSWIDMYGYIYHDIQ 268
>gi|86131461|ref|ZP_01050059.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Dokdonia donghaensis MED134]
gi|85817906|gb|EAQ39074.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Dokdonia donghaensis MED134]
Length = 401
Score = 90.2 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 38/270 (14%), Positives = 92/270 (34%), Gaps = 4/270 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+F +A RYL S ++I ++IS +++G M L +V+S +G +E + I
Sbjct: 1 MQFARYIAQRYLVSKSGTNAVNIITYISIGSIILGTMVLFIVLSAFSGLKEFNLSITSII 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + + + + I+ V + S ++G+ +
Sbjct: 61 DPDIKVLPATGKTITLTPTQEKELASFTEIQAYSKVIEERAYLEHEGKTSLGFIKGVDEN 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGD---KINILSPYGDVTPMG 181
+ Q + F GN + + ++ ++ + P
Sbjct: 121 YLNVTQIDSTIFAGNWPTVGEPAVAMGYLVRRRLSVNLTDYSSLLSVMTPKPGTGQITDP 180
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKT 240
+ S V+ DN ++ ++ + +S +E+ + ++
Sbjct: 181 TQAFNSSKAVVSGVFQAGETLDNDHIFANIDFVGALLGYPEDKISTLEIKLSPEADEDRL 240
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYES 270
HE I +L N V++ + + + +
Sbjct: 241 HEKISSLLNNNVIIKNRIELNDALYKMLNT 270
>gi|238897368|ref|YP_002923045.1| transport protein of outer membrane lipoproteins (ABC superfamily,
membrane) [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229465123|gb|ACQ66897.1| transport protein of outer membrane lipoproteins (ABC superfamily,
membrane) [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 417
Score = 90.2 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 59/269 (21%), Positives = 111/269 (41%), Gaps = 1/269 (0%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M+ ++AWR+ RK +S+ S IS + +GV LI+ +S MNGF ++ R
Sbjct: 1 MTFLFARAWLIAWRFNRDRRKGGMVSLLSLISIFSIALGVAVLIISLSTMNGFERELKNR 60
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
VL + H I + D+ I NR++ I +I P++ + + + +
Sbjct: 61 VLAVVPHGQIHFLDLSIYDWPLILNRVEKIKGIISAAPYIDFTGLIENETKIRAVQINGV 120
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ S K +I+G+ LA LG+ +G + IL P +
Sbjct: 121 SLKREHSISALPDFVLNHAWQKFKASQKQIILGQGLANTLGVKVGSWLTILIPNINTQIR 180
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ + V+G+F+ D+ + + L +AQ Y + + +SGI++ +KD +
Sbjct: 181 LLKPKRIHLQVIGVFQ-LSGQLDHNLAIIPLSDAQQYLEMGDKISGIKIKIKDIFNADHI 239
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + V W Y + +
Sbjct: 240 THKAAQATKSDVNFSSWISTYGYMYHDIQ 268
>gi|260889550|ref|ZP_05900813.1| o protein releasing system transmembrane protein LolE [Leptotrichia
hofstadii F0254]
gi|260860961|gb|EEX75461.1| o protein releasing system transmembrane protein LolE [Leptotrichia
hofstadii F0254]
Length = 387
Score = 90.2 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 51/265 (19%), Positives = 108/265 (40%), Gaps = 21/265 (7%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
E +A+R++ + S S +GV I V IV ++V NG ++MI +L ++
Sbjct: 2 VEFFIAFRHVVERK------FQSIFSVLGVAIAVTVFIVSLTVSNGLEKNMINSLLTMSP 55
Query: 67 HV-VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
H+ + ++ Y+ A +L I V V+P ++ Q+ + + +
Sbjct: 56 HILIKNKQNPFFEGYEETAEKLKKIKGVKAVIPQINSQSIIKFEGYAKGVLADGISPENV 115
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ L+ R N+S G + +L +G V+ + +
Sbjct: 116 KNGLKLKMVRGNDNISELDSVLIGEEMAGELRVKVG-------------QQVSLISAENK 162
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
TV G+F+ F +YD+ + + L+ Q+ AV+ +++ V+ P +E+ + ++
Sbjct: 163 EIKLTVRGIFKTGFLEYDSNVAVVPLRAMQILAEQGEAVTEMDIKVESPQKVEEVLKEVI 222
Query: 246 RILGN-GVVVIDWQQRYQIFFSCYE 269
++ VI W+ +
Sbjct: 223 TVMNQKEYTVISWKTLNHNLLKAVQ 247
>gi|149196367|ref|ZP_01873422.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Lentisphaera araneosa HTCC2155]
gi|149140628|gb|EDM29026.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Lentisphaera araneosa HTCC2155]
Length = 422
Score = 89.8 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 63/277 (22%), Positives = 108/277 (38%), Gaps = 18/277 (6%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ WRYL + SI +++S +G M+GV L+VVMSVMNG ++ K+++ + H+
Sbjct: 5 FFLTWRYLKPKK--NISSIVTWLSCLGPMLGVGVLLVVMSVMNGHPHEIQKKIMEVESHI 62
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSG--VLVRGISNSDF 126
+ + K P+ F+ S S + + +
Sbjct: 63 SMSRYDGKFFPDYLDLMDHIENKYDFKCSPYTQMPIFIQQDKSIKSFLAKGILPEYDQEA 122
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
S L+ KG +I L+ LG++IGDKI + SP +
Sbjct: 123 SKLKTYIIDGLDENGKYQLDPKGALISSRLSAMLGVTIGDKIIVHSPQKYGKLLLQKEEG 182
Query: 187 K----------SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVS-GIEVFVKDPD 235
K TV G+FR + D D ++++ L A + S GI++ + DP
Sbjct: 183 KVDDVYLNMALELTVSGIFRTGYVDIDKNLMFIHLDSANELLEQDWGASLGIDLSIPDPV 242
Query: 236 AIEKTHENIVRI---LGNGVVVIDWQQRYQIFFSCYE 269
E+ + + R WQ + + FF +
Sbjct: 243 KAEEVTKELARDPYFFNTKAQFYPWQYKKKQFFDIVK 279
>gi|21226193|ref|NP_632115.1| ABC transporter permease protein [Methanosarcina mazei Go1]
gi|20904424|gb|AAM29787.1| ABC transporter permease protein [Methanosarcina mazei Go1]
Length = 392
Score = 89.8 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 54/273 (19%), Positives = 105/273 (38%), Gaps = 24/273 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ + +E+ +A+R + + + + +S + I VM L V ++M GF ++ K
Sbjct: 1 MNLMN-YELFIAFRQIRARK------FQTLLSVGAIAIAVMVLTVSQALMVGFTGELYKT 53
Query: 61 VLGINGH--VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
+ H V Q+ + Y + R+ I V V PF++GQA + + L
Sbjct: 54 TVDKLPHVSVSPQEGEDYIYLYGTLMERIGTIEGVTAVSPFLTGQASFRFKDNSLNAELR 113
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
+ + + G+ V+IG LA L +++GD I + P +
Sbjct: 114 GVVPSQENEISSIEEDIVEGSFRELEFSRNTVVIGSKLAEKLEVNLGDSIAVSFPNANPL 173
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+ + D + Y SL A+ ++++ N V+G+ V + D +
Sbjct: 174 SLR----------VVGIFHTRSPLDESLTYTSLDTARRFYDVPNVVNGVWVRLSDFNRDR 223
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFS--CYE 269
+ E I + G W + E
Sbjct: 224 EVAEEIEEL---GYNARGWTETNPAILRTIAIE 253
>gi|193212650|ref|YP_001998603.1| hypothetical protein Cpar_0995 [Chlorobaculum parvum NCIB 8327]
gi|193086127|gb|ACF11403.1| protein of unknown function DUF214 [Chlorobaculum parvum NCIB 8327]
Length = 426
Score = 89.4 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 52/287 (18%), Positives = 105/287 (36%), Gaps = 22/287 (7%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ E +A R+ F R ++ + F S +G+ +G ALI+ +S++NGF + +++
Sbjct: 1 MKAEFYIARRFAFKPRSHSKPTFIVFASALGIAVGTAALILTLSIVNGFSSVIEGKLIRF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANR-------LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVL 117
H+ ++Q L + + +++ + + G G +
Sbjct: 61 TSHLQVRQADGRLFYETRRDRQTLNGVPGIAETYPFLELNVMLKSRNQSRGDGGGIAPAQ 120
Query: 118 VRGISNSDFSYL----QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSP 173
+RGI+ + ++ + + D V+ GK LA LGI GD++ I+
Sbjct: 121 IRGITPEEARKFLGGAESGLWQALDGTDAEADGALPVMCGKALAEQLGIKTGDRLMIVGV 180
Query: 174 Y-----------GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN 222
V + G+ + V G++ + + +V +
Sbjct: 181 DGGANGSALSGAQSVVELLSGLDLQVARVAGIYNTGLTEGFDDLVVFAGLGRLQALYHPG 240
Query: 223 AVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+SG E V D ++ + LG QRY F +
Sbjct: 241 MISGYEANVTDLRNLDAISAQVTEALGYPFYSYTVYQRYSNLFEWLK 287
>gi|194336473|ref|YP_002018267.1| protein of unknown function DUF214 [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308950|gb|ACF43650.1| protein of unknown function DUF214 [Pelodictyon phaeoclathratiforme
BU-1]
Length = 423
Score = 89.4 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 53/282 (18%), Positives = 113/282 (40%), Gaps = 21/282 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
E +A R+ F R + ++ IG+ +G ALI+ +S++NGF + +++ + H
Sbjct: 4 EFYIARRFAFKQRSATKPTFIVMVAVIGIAVGTAALILTLSIVNGFASSVQNKLISFSSH 63
Query: 68 VVIQQKYYP-LVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLS------SGGSGVLVRG 120
+ I+ + + ++ P++ PF+ + + V+V+G
Sbjct: 64 LQIRHPEEQLFQERRTDLAKITGHPNIASASPFLEKSFVLRNRTTGGTESWRSKPVVVKG 123
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+S S F R + G G+ G+ LA NL + +G K+ ++ + +
Sbjct: 124 VSEEQKSVFLKKFLRAGTLDRRNNGEGIGLYAGQTLAENLDLRVGKKVMLVGLGSNASGA 183
Query: 181 GMGIRSKSYTVL-------------GMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGI 227
+ +K+ + +D+ +V L+E Q FN +SG
Sbjct: 184 KLIAGNKNIVDMLSSLDLEVGVIRGIYDTGLQEGFDDFVVIADLKELQERFN-PLMISGY 242
Query: 228 EVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ V + + + +T + ++ +LG +RY F +
Sbjct: 243 DASVHNLNQLPETVKELLNLLGFPFYGYTVFERYANLFEWLK 284
>gi|302873540|ref|YP_003842173.1| hypothetical protein Clocel_0638 [Clostridium cellulovorans 743B]
gi|307688280|ref|ZP_07630726.1| hypothetical protein Ccel74_08978 [Clostridium cellulovorans 743B]
gi|302576397|gb|ADL50409.1| protein of unknown function DUF214 [Clostridium cellulovorans 743B]
Length = 385
Score = 89.4 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 44/262 (16%), Positives = 100/262 (38%), Gaps = 15/262 (5%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
R + +A R+L S++ + + +G+ +GV I + S++ G ++ +I + +G
Sbjct: 1 MRLALKIATRFLKSSKGQ------TSLIVLGIAVGVSVQIFIGSLIQGLQKSLINKTIGN 54
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + I + ++ + + V +
Sbjct: 55 SPQITISSNTDDKFIKNYNEIVDRIKTSEDRITNISVVSDAPALIKKDKKNYSVLIRGMN 114
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + + VIIGK+L + LG +GD++ I++ G+V
Sbjct: 115 IEDSDKIYNIKNRIFEGREPKGDLEVIIGKELQQELGAKLGDELQIITNSGEVNK----- 169
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
T+ G + + + + +L+ +Q F+LE ++GIE+ V + ++ N+
Sbjct: 170 ----LTITGFYNLNVASLNKSWMITTLETSQKIFSLEGKITGIEMQVTEIFKADEIATNL 225
Query: 245 VRILGNGVVVIDWQQRYQIFFS 266
L V +W+ + S
Sbjct: 226 TSKLDADFKVDNWKAQNAELLS 247
>gi|256819617|ref|YP_003140896.1| hypothetical protein Coch_0778 [Capnocytophaga ochracea DSM 7271]
gi|256581200|gb|ACU92335.1| protein of unknown function DUF214 [Capnocytophaga ochracea DSM
7271]
Length = 395
Score = 89.1 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 45/265 (16%), Positives = 91/265 (34%), Gaps = 3/265 (1%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH- 67
+A RY+F+ I+I + ++ V++G AL +V++ G + + +
Sbjct: 5 FYIARRYMFAKSSQNVINIINRVTAFVVVLGGAALFIVLAGFAGLKNFTLSFSSTFDPDL 64
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
V + L +L + V+ + Q F++ + +
Sbjct: 65 KVFPKTGKYLSLTNQDTLKLSQLSSVVHFTKVLEEQVFLTHNQKNHIAYIKGVDAEYPKV 124
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARN-LGISIGDKINILSPYGDVTPMGMGIRS 186
+S + G I +L N L S +I +
Sbjct: 125 NDVDSILVLGNWELSPPSVIVGATIFNNLGLNLLDGSSPLQIVVPKAGKGSILNDPMPYR 184
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHENIV 245
++++V+ + D V+ SL EAQ L + VS IEV + ++ E +
Sbjct: 185 QAFSVVQGIYQLTEELDKKYVFSSLDEAQFLLGLSKGQVSAIEVKLAPNADEKQVVEQLS 244
Query: 246 RILGNGVVVIDWQQRYQIFFSCYES 270
++ VVV + Q + +
Sbjct: 245 QLFQEPVVVKNRAQLNDALYRMLNT 269
>gi|298674348|ref|YP_003726098.1| hypothetical protein Metev_0381 [Methanohalobium evestigatum
Z-7303]
gi|298287336|gb|ADI73302.1| protein of unknown function DUF214 [Methanohalobium evestigatum
Z-7303]
Length = 385
Score = 89.1 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 50/268 (18%), Positives = 108/268 (40%), Gaps = 23/268 (8%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+E+ +A +Y+ S ++ F +S + I VM +++ M GF E++ +
Sbjct: 3 YELFIAIKYITSRKRQTF------LSVGAIGIAVMMIVISQGFMAGFTEELYDTTVDELA 56
Query: 67 HVV--IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
HV + + Y+ + N + I V V P+++G+A V + +L +
Sbjct: 57 HVTISPEDGNNYIHLYKNLINSVGKIEGVTGVSPYLTGEAIVKHKDDTQNVILKGIVPER 116
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ Q + GN S +++G DL + IGD ++ P + + +
Sbjct: 117 ETEVSQINRDIIKGNFSELKYTKNSIVVGDDLLPEINAKIGDVVDASFPDANPVSLKIVG 176
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + D ++Y SL+ AQ ++ + V+G+ + +++ + K +NI
Sbjct: 177 VYDTGSD----------DDRDLIYTSLKTAQDFYGTSDVVNGVSLRIRNVNNDRKIADNI 226
Query: 245 VRILGNGVVVIDWQQRYQIFFS--CYES 270
++ G W + E+
Sbjct: 227 QKM---GYEASGWTETNPEILRTIAIET 251
>gi|42523263|ref|NP_968643.1| lipoprotein releasing system transmembrane protein [Bdellovibrio
bacteriovorus HD100]
gi|39575468|emb|CAE79636.1| lipoprotein releasing system transmembrane protein [Bdellovibrio
bacteriovorus HD100]
Length = 416
Score = 89.1 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 63/269 (23%), Positives = 110/269 (40%), Gaps = 16/269 (5%)
Query: 15 YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQ-- 72
++FS R + + +++S IG+ I V A +VV+ VMNG + KR+LG+ H+ +Q
Sbjct: 10 FIFSPRAGSLVKRIAWLSMIGITISVTAFLVVLFVMNGMNASIHKRILGLEPHLYVQVAG 69
Query: 73 ---------KYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAF--VSGLSSGGSGVLVRGI 121
+ ANR + ++ GQ ++ + S
Sbjct: 70 ADTAQSLESSPAFQRLQEDPANRAYVYETMDVIIRSQDGQFRGGIARGVTRESLEHFIEQ 129
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ S+ Y D V++G DLA++LG+ GD + ++SP G + P G
Sbjct: 130 LQRIDRKPTDRDSQVYFWDPQDVPGRGEVVVGVDLAQSLGVFEGDFLTVVSPSGLLLPPG 189
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN-AVSGIEVFVKDPDAIEKT 240
+ + + + PD D ++ EA E +GIEV++ D IE
Sbjct: 190 ETPKFERVRIKRIVTTSLPDLDGQFIFYQRGEALSALVSEGLGKNGIEVWLPDEGRIESV 249
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
E++++ GV V W R +
Sbjct: 250 KEDLMKF--EGVSVETWMDRNSALLYALK 276
>gi|307262573|ref|ZP_07544204.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 13 str. N273]
gi|306872071|gb|EFN03784.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 13 str. N273]
Length = 366
Score = 89.1 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 40/242 (16%), Positives = 89/242 (36%), Gaps = 13/242 (5%)
Query: 28 ASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRL 87
+ ++ G+++GVMAL++V+SVMNG + +L H ++ + Q
Sbjct: 1 MTNLASFGIVLGVMALVIVLSVMNGLENMQKRNLLSTLPHAIVLPQEGHFDKNQ------ 54
Query: 88 DFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRG 147
P + S + + + G + + +
Sbjct: 55 ---PLNLPAFASKSVAINKANVIIQSRQGINAGQLLGVENESDDPMLFGENVKALLPQGE 111
Query: 148 KGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMV 207
V+IG LA L IS G+KI ++ + + + + +
Sbjct: 112 FNVLIGSRLANKLNISTGEKIRLMITENSQYTPMGRVPVQRLFNVVGIYHSNNEASEYTL 171
Query: 208 YMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFS 266
+ +L + + E+ V G+ ++++DP + + +++ N + DW+++ FF
Sbjct: 172 FANLADVGRLLRITEDQVQGMRLYLQDPFQVTELNQHFDA---NNYKISDWREQKGEFFQ 228
Query: 267 CY 268
Sbjct: 229 AV 230
>gi|320155798|ref|YP_004188177.1| lipoprotein releasing system transmembrane protein LolC [Vibrio
vulnificus MO6-24/O]
gi|319931110|gb|ADV85974.1| lipoprotein releasing system transmembrane protein LolC [Vibrio
vulnificus MO6-24/O]
Length = 373
Score = 89.1 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 52/240 (21%), Positives = 92/240 (38%), Gaps = 8/240 (3%)
Query: 31 ISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFI 90
+S G+ +GVM+L+ V+SVMNGF + +R+LG+ V+
Sbjct: 1 MSTAGITVGVMSLVTVLSVMNGFEAQLKERILGVLPQAVVSMDGGKTPHTTPPEFVRALS 60
Query: 91 PDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGV 150
P + V S S + GI S ++N G +S V
Sbjct: 61 PHYQP--TPLVRSEAVIQSPSQLSVGYLIGIEPSADDPIENHL--IAGRLSQLEAGKYQV 116
Query: 151 IIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMS 210
+G LAR+L +S+GDK+ ++ I S+ + D D ++
Sbjct: 117 FLGHSLARSLNVSMGDKVRLMVTSASQFTPLGRIPSQRNFTVAGMFNTGSDIDGQLMVTH 176
Query: 211 LQEAQLYFNLENA-VSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+++A L + +SG ++ DP + + L +G DW+ + F +
Sbjct: 177 IEDAGRLLRLPSKTISGWRLYFDDPFQVTEAANT---PLPDGWQWSDWRAQRGELFQAVK 233
>gi|295136510|ref|YP_003587186.1| LolC-like FtsX family hypothetical protein [Zunongwangia profunda
SM-A87]
gi|294984525|gb|ADF54990.1| LolC-like FtsX family membrane protein [Zunongwangia profunda
SM-A87]
Length = 398
Score = 89.1 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 49/269 (18%), Positives = 96/269 (35%), Gaps = 3/269 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+F +A RYLFS N I+I + I+ IGV G +L +V+S +G RE +
Sbjct: 1 MKFPFYIAKRYLFSKSSNNAINIITIIAAIGVFAGAFSLFIVLSGFSGLREFSLAFANEF 60
Query: 65 NGH-VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ VI + + + + I + + + F+ +
Sbjct: 61 DPDLKVIPKTGKTITFSKNLEEEFAKIDGIANYSKTIEERVFLEYKEKTAWAFIKGVDER 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLAR-NLGISIGDKINILSPYGDVTPMGM 182
+ +S S++ G I + L + ++ + P
Sbjct: 121 YQQVTVIDSSVDGTWFTSSEPQVVIGADISRKLNPGIFNYNRPMRLIVPKPGKGQVTNPA 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
++ V+ D ++ V+ ++ AQ +L+ N S IEV + EK
Sbjct: 181 DAFNQKSVVVSGIYNINSDLNDKYVFSNIAFAQSLLDLDKNTYSAIEVKLTAEADAEKVK 240
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYES 270
I+++ GN V + Q + + +
Sbjct: 241 AAILKLFGNSVEIRTRAQLNDVLYKMLNT 269
>gi|86144146|ref|ZP_01062483.1| putative lipoprotein releasing system transmembrane protein
[Leeuwenhoekiella blandensis MED217]
gi|85829408|gb|EAQ47873.1| putative lipoprotein releasing system transmembrane protein
[Leeuwenhoekiella blandensis MED217]
Length = 400
Score = 89.1 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 39/270 (14%), Positives = 87/270 (32%), Gaps = 4/270 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+F V +A RYLF+ N I+I + IS + ++ G AL +V+S +G ++ +
Sbjct: 1 MKFPVFIAKRYLFTKSSNNAINIITLISAVSIIAGAAALFIVLSGFSGLKDFSLSFSSIF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + + + + I V + ++G+ +
Sbjct: 61 DPDLKVLPASGKTILFTPDLAAELEANPDIISYTQVIEERAFLEFRGKNHIAYIKGVDEN 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLA---RNLGISIGDKINILSPYGDVTPMG 181
+ YGN + + G S ++ + P
Sbjct: 121 YRKVNSIDSTLLYGNWITPEEPVAAIGFGISRILSLGVNNYSDLLRVMVPKPGTGQITDP 180
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKT 240
+ S V+ + D ++ ++ + N A +S +E+ + +
Sbjct: 181 TQAFNSSQLVVSDIFQVNEELDQKYLFTNIDYVRKLLNYNEATLSSVELKLNPKADPVQV 240
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ I R+ G+ V Q + +
Sbjct: 241 QQRIQRLFGDQTEVKTRFQLNDKLYKMLNA 270
>gi|20092063|ref|NP_618138.1| hypothetical protein MA3247 [Methanosarcina acetivorans C2A]
gi|19917277|gb|AAM06618.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 392
Score = 88.7 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 52/269 (19%), Positives = 100/269 (37%), Gaps = 23/269 (8%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG- 63
R+E+ +A R + + + + +S + + VM L + ++M GF E++ +
Sbjct: 4 MRYELFIALRQIRARK------FQTLLSVGAIALAVMVLTISQALMVGFTEELYDTTVDK 57
Query: 64 -INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
V Q+ + Y + + I +V V PF++GQA + + L I
Sbjct: 58 LPQVSVSPQEGEDYIYLYGTLMEEISSIEEVTAVSPFLTGQASFRFKDNSLNAELKGVIP 117
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ GN V+IG LA L +++GD I++ P + +
Sbjct: 118 LREDEISSIEADMVEGNFRELEFSVNTVVIGSKLAEKLEVNVGDSIDVSFPNANPLSLR- 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ D + Y SL AQ ++++ + V+GI V ++D + +
Sbjct: 177 ---------VVGIFHTGSPLDESLAYTSLDTAQEFYDVPDVVNGISVRLQDFNMDREVAA 227
Query: 243 NIVRILGNGVVVIDWQQRYQIFFS--CYE 269
I + G W + E
Sbjct: 228 EIGK---TGYEAKGWTETNPAILRTIAIE 253
>gi|311086034|gb|ADP66116.1| hypothetical protein CWO_01550 [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
Length = 412
Score = 88.7 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 50/266 (18%), Positives = 108/266 (40%), Gaps = 2/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ ++ ++ KN I + S +S IGV I + ALIV +S +NGF+ + K +L
Sbjct: 1 MNSLPFLITKKFSLKKNKNYLIFLTSILSKIGVSISIFALIVSVSALNGFQVLLNKTILS 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
H +++ + + +++ +P + P++ + + + + ++ SN
Sbjct: 61 NLPHGIMKFTDQSYFKWHSMIKKINILPGITYSEPYIVTKGLLVIK-NQVKPIEIKSFSN 119
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ F +I+ L + L I G+ INI +
Sbjct: 120 IKHLKKKFFFHLKMIIFLKKKGNECEIILSSYLLKYLSIKKGNWINIFFLNKKDDDLNSQ 179
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
I++ S + G+F D+ + Y+ L + +FN + ++ IE+ + DP +K N
Sbjct: 180 IQNFSLKITGVFESNGIL-DSKIGYVPLSFFKKFFNADKNINTIELHMSDPLNADKIILN 238
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + W Y+ + +
Sbjct: 239 AAKKINTPFLAYTWIDSYKYIYDDIK 264
>gi|331008029|ref|ZP_08331050.1| lipoprotein releasing system transmembrane protein LolE [gamma
proteobacterium IMCC1989]
gi|330418161|gb|EGG92806.1| lipoprotein releasing system transmembrane protein LolE [gamma
proteobacterium IMCC1989]
Length = 366
Score = 88.7 bits (217), Expect = 9e-16, Method: Composition-based stats.
Identities = 53/220 (24%), Positives = 95/220 (43%), Gaps = 2/220 (0%)
Query: 50 MNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGL 109
MNGF ++ +R+L + H I Q + D+ +A+ + P + P++ G A +S
Sbjct: 1 MNGFDREIKQRILSVVPHGFIDQHPHLS-DWSGLADVISSTPHLTASAPYIGGYAMLSSP 59
Query: 110 SSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN 169
S S L + + + G N G+++G+ LA L + +GD +
Sbjct: 60 RSVQSSQLQGILPTVERQVSVIDEYMYRGETDNLQAGEFGIVLGRILAHRLRVDMGDSVV 119
Query: 170 ILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV 229
+ P +TP G+ R+K +TV+G+F + D + + L +AQ F V G+ V
Sbjct: 120 MTLPDISITPAGIFPRTKRFTVVGIFEVGAQV-DQTLAMIHLSDAQKMFRYGKNVQGLRV 178
Query: 230 FVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
V D + + + LG + DW + F +
Sbjct: 179 KVDDIYQAQSVMQTLQEQLGENYQLTDWSKTQGSLFQAVQ 218
>gi|260061332|ref|YP_003194412.1| putative lipoprotein releasing system transmembrane protein
[Robiginitalea biformata HTCC2501]
gi|88785464|gb|EAR16633.1| putative lipoprotein releasing system transmembrane protein
[Robiginitalea biformata HTCC2501]
Length = 402
Score = 88.3 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 40/272 (14%), Positives = 92/272 (33%), Gaps = 6/272 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F + +A RY+ S ++I + ++F ++IG AL +V+S G + +
Sbjct: 1 MNFPLYIARRYVRSKSSQNAVNIINAVTFGVIVIGSAALFIVLSGFAGLKTFSLSFSNTF 60
Query: 65 NGHV-VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ + ++ A L IP + + + +++ + S
Sbjct: 61 DPDMRIVPASGKTFAFGPEQAAGLRDIPGIASYSRELEERVYLTHDQRSMIAYIKGVDSA 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + +S + G+ I L+ ++ I ++ G G
Sbjct: 121 YNRTTGIDSTIYMGLWDLSAQQAVSGISIASQLSLSVQNYRSPLIVLVPKPGTGNLSPQG 180
Query: 184 IRSKSYTVLGMFRMRFPDYDNG----MVYMSLQEAQLYFNLEN-AVSGIEVFVKDPDAIE 238
+ + Y + + + G ++ L Q ++ VSG+ + +
Sbjct: 181 LGDQPYNQMAVILSGIYQIEEGLDKKYLFADLGLVQALLERDSLQVSGVNLRLTPEADEA 240
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ LG+GV V +Q Q + +
Sbjct: 241 AMLSAVRDTLGSGVEVRTRRQLNQTLYRMLNT 272
>gi|297624150|ref|YP_003705584.1| hypothetical protein Trad_1926 [Truepera radiovictrix DSM 17093]
gi|297165330|gb|ADI15041.1| protein of unknown function DUF214 [Truepera radiovictrix DSM
17093]
Length = 393
Score = 88.3 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 42/269 (15%), Positives = 88/269 (32%), Gaps = 13/269 (4%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ F + +A R++ ++ S ++ +GV +GVM L+ +S+ NGF +++I
Sbjct: 1 MTL-RPFVLFLALRHIRRR------ALQSALTVLGVAVGVMVLVTALSLTNGFIDELISS 53
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
L HV + + + + + +
Sbjct: 54 TLQATPHVSLYPAGGGTLPDDGRLLAAIEAHPEVVAAAPYVSAQALIARRADAQAGIPGR 113
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + + ++ + G + S + +V +
Sbjct: 114 QGYTQVLGIDPERQQAVLDLEVLSAEASALEAGGII----LGSSLANSLGVWAGDEVLLV 169
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
++ V G FR+ D + Y S+Q Q Y +SG V + DPD
Sbjct: 170 DFNRSRTAFPVAGTFRVGNEIIDAAVSYTSVQALQDYLGAPGELSGFHVRLADPDRALAV 229
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + G++ WQ + E
Sbjct: 230 AQTLADT--TGLLATPWQHLFGNLVEQLE 256
>gi|307251514|ref|ZP_07533421.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|306860978|gb|EFM92984.1| Lipoprotein-releasing system transmembrane protein lolC
[Actinobacillus pleuropneumoniae serovar 6 str. Femo]
Length = 366
Score = 88.3 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/242 (16%), Positives = 87/242 (35%), Gaps = 13/242 (5%)
Query: 28 ASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRL 87
+ ++ G+++GVMAL++V+SVMNG + +L H ++ + Q ++
Sbjct: 1 MTNLASFGIVLGVMALVIVLSVMNGLENMQKRNLLSTLPHAIVLPQEGHFDKNQSLSLPA 60
Query: 88 DFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRG 147
V V Q+ + G + + +
Sbjct: 61 FASKSVAINKANVIIQS---------QQGINAGQLLGVENESDDPMLIGEAVKTLLPQGE 111
Query: 148 KGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMV 207
V+IG LA L I G+KI ++ + + + + +
Sbjct: 112 FNVLIGSRLANKLNIGTGEKIRLMITENSQYTPIGRVPVQRLFNVAGIYHTNNEASEYTL 171
Query: 208 YMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFS 266
+ +L + + E+ V G+ ++++DP + + + + + DW+++ FF
Sbjct: 172 FANLADVGRLLRITEDQVQGMRLYLQDPFQVTELSQYFNA---DSYKISDWREQKGEFFQ 228
Query: 267 CY 268
Sbjct: 229 AV 230
>gi|119505776|ref|ZP_01627844.1| Addiction module toxin, Txe/YoeB [marine gamma proteobacterium
HTCC2080]
gi|119458410|gb|EAW39517.1| Addiction module toxin, Txe/YoeB [marine gamma proteobacterium
HTCC2080]
Length = 405
Score = 88.3 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 48/257 (18%), Positives = 91/257 (35%), Gaps = 10/257 (3%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A R + +R S +S +G+ + V L+ V+SVMNGF +M +R+LG+ HV I
Sbjct: 10 ALRQVL-DRGRGLSGFLSRLSVVGLTLAVAILLAVLSVMNGFEREMRERILGVVPHVSIH 68
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
+ D + F GV V +
Sbjct: 69 GFA-------DLEAWNQLQADAQRAEGITGAGLFYERDLLAVQGVRVTAAKMLGVTAPLW 121
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTV 191
+ S + V++G +A+ LG+ IGDK++++ P + +
Sbjct: 122 QRWEAWSKPSKLALQPGEVVLGVGMAQRLGVEIGDKLSVIVPGDAFRFETLPATVALH-- 179
Query: 192 LGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNG 251
+ + D ++ + E +G+ + ++ +T + R L
Sbjct: 180 VVALIDSGTELDEALMLADFEYTATLLGDELTATGLALQLQQLFEAPETRWHFARTLPPS 239
Query: 252 VVVIDWQQRYQIFFSCY 268
V DW R+ ++
Sbjct: 240 FYVTDWTLRHGNLYAAI 256
>gi|213962410|ref|ZP_03390673.1| probable ABC-type transport system, permease component
[Capnocytophaga sputigena Capno]
gi|213955076|gb|EEB66395.1| probable ABC-type transport system, permease component
[Capnocytophaga sputigena Capno]
Length = 395
Score = 88.3 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 44/265 (16%), Positives = 91/265 (34%), Gaps = 3/265 (1%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A RY+F+ I+I + ++ V++G AL +V++ G +E + + +
Sbjct: 5 LYIARRYMFAKSSQNVINIINRVTAFVVVLGGAALFIVLAGFAGLKEFTLSFSSTFDPDL 64
Query: 69 VIQQKYYPL-VDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
I K + L + V + Q F++ + +
Sbjct: 65 KIFPKTGKYLSITKQDTLNLRQLSSVAHFTKVLEEQVFLTHNQKNHIAYIKGVDTEYPLV 124
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARN-LGISIGDKINILSPYGDVTPMGMGIRS 186
+S G I +L N S +I +
Sbjct: 125 NAVDSILVLGNWDLTPPSVIVGGTIFNNLGLNLADGSSPLQIVVPKAGKGSILNDPMPYR 184
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFN-LENAVSGIEVFVKDPDAIEKTHENIV 245
++++V+ D D V+ SL+EAQ +N VS IEV + ++ + +
Sbjct: 185 QAFSVVQGIYQLTEDLDKKYVFSSLEEAQFLLGANKNQVSAIEVKLAPNANEKEVIKQLP 244
Query: 246 RILGNGVVVIDWQQRYQIFFSCYES 270
++ +VV + Q + +
Sbjct: 245 QLFHEPIVVKNRVQLNDALYRMLNT 269
>gi|189500281|ref|YP_001959751.1| hypothetical protein Cphamn1_1340 [Chlorobium phaeobacteroides BS1]
gi|189495722|gb|ACE04270.1| protein of unknown function DUF214 [Chlorobium phaeobacteroides
BS1]
Length = 421
Score = 87.9 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 50/282 (17%), Positives = 92/282 (32%), Gaps = 17/282 (6%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ E+ +A R+ F R + + I+ G+ +G ALI+ +S++ GF + +++G
Sbjct: 1 MKSELYIARRFAFKPRSTSKPTFIIVIAVAGIALGTAALILTLSIVKGFSAQIENKLIGF 60
Query: 65 NGHVVIQQKY-YPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ H I+Q RL I ++ V PF+ + G + +
Sbjct: 61 SSHFQIRQAEGRYFYPLPADTTRLHAIDNISSVTPFLEKNIVLQSKGVHGELIQPAMLKG 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGV---------------IIGKDLARNLGISIGDKI 168
D + L DR G L +
Sbjct: 121 VDTNTLPAFLRESIVEGEWLGDRDASTLHILVGKPLAESLQLSPGNRLMIISTSNRSSGG 180
Query: 169 NILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN-AVSGI 227
+ V + + +D+ M+ L Q +N + +SG
Sbjct: 181 LLNESDTIVDLLSAMDLELATVSGIYETGLNEGFDDYMIIADLGAMQHVYNADKVRISGY 240
Query: 228 EVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
EV V D ++ T+ + V LG +RY F +
Sbjct: 241 EVMVDDIGKLDMTNRSAVDSLGYPFYSFTVYERYANLFEWLK 282
>gi|108757531|ref|YP_633566.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Myxococcus xanthus DK 1622]
gi|108461411|gb|ABF86596.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Myxococcus xanthus DK 1622]
Length = 788
Score = 87.9 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 68/280 (24%), Positives = 125/280 (44%), Gaps = 40/280 (14%)
Query: 28 ASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRL 87
+ +S GV +GVMALI+V+SVM+GF D+ +++LG N H V+ + L +Y + +
Sbjct: 370 MTALSVGGVGVGVMALIIVLSVMSGFEADLQQKILGTNAHAVVSKYAGDLPEYAKVMESV 429
Query: 88 DFIPDVIKVLPFVSGQAFVS-------------------------------------GLS 110
+P V+ PF+ Q ++
Sbjct: 430 RKVPGVVGQTPFIINQVMIASEGNVDGVIIKGIDPGTVGEVTDLPKNILGGGSLDTLYTP 489
Query: 111 SGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINI 170
+ ++ ++ G++IG++LA +L + +GD++N+
Sbjct: 490 EKIVHRGLPDEEPAEEGGVEEDEIIRRSGTPKKPQVLPGIVIGRELAASLRVVVGDRVNV 549
Query: 171 LSPYGDV-TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV 229
+SP G P+G +S+++ V +F +YD+ VY+ L+EAQ +F+++ +GIE+
Sbjct: 550 VSPLGTELGPIGPIPKSRAFRVAAIFYSGMYEYDSKFVYILLKEAQDFFDMKG-ATGIEL 608
Query: 230 FVKDPDAIEKTHENIVRILG-NGVVVIDWQQRYQIFFSCY 268
V D D + +V+ LG DW + + FFS
Sbjct: 609 KVADIDDARRIASQVVKALGGYPYRARDWGEMNKNFFSAL 648
>gi|89889707|ref|ZP_01201218.1| putative lipoprotein releasing system transmembrane protein
[Flavobacteria bacterium BBFL7]
gi|89517980|gb|EAS20636.1| putative lipoprotein releasing system transmembrane protein
[Flavobacteria bacterium BBFL7]
Length = 405
Score = 87.5 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/271 (15%), Positives = 93/271 (34%), Gaps = 8/271 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RYL S I+I + +SFI ++G AL +V+S +G + +
Sbjct: 1 MNFSYYIARRYLVSKNGKNAINIINILSFIITIVGTAALFIVLSGFSGLKSFSTEFSSYF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + I +++ R I VL + ++G+ +
Sbjct: 61 DPDLKITPLNGKVLEIPLSRKRDLENLPGITVLSATIEEKAFLHYDGKNDIAYIKGVDGN 120
Query: 125 DFSYLQNSFSRFYGNV--SNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
++ GN +++ G I +L+ + + I+ P +
Sbjct: 121 YDQIIKTDTILLQGNWLGNSNLQVVAGAGIADELSLQVDNYSRL-LQIMVPKPGKNAINA 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNG----MVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAI 237
S++ + + + ++ ++ A+ N E+ S IE+ +
Sbjct: 180 LNYRDSFSQIDVVATGTFRINENLDSKYIFTTITAARKLLNYNEDQASSIEIKLAQDVDE 239
Query: 238 EKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
++ E I + +V+ + Q +
Sbjct: 240 DQIREKIKNLFNVPIVIKNRLQMNDGLYKML 270
>gi|108758232|ref|YP_632892.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Myxococcus xanthus DK 1622]
gi|108462112|gb|ABF87297.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Myxococcus xanthus DK 1622]
Length = 789
Score = 87.5 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 69/288 (23%), Positives = 128/288 (44%), Gaps = 40/288 (13%)
Query: 20 RKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVD 79
R+ + + + +S GV +GVMALI+V+SVM+GF D+ +++LG N H V+ + L +
Sbjct: 363 REQSPTMMMTALSVGGVGVGVMALIIVLSVMSGFEADLQQKILGTNAHAVVSKYAGDLPE 422
Query: 80 YQFIANRLDFIPDVIKVLPFVSGQAFVS-------------------------------- 107
Y + + +P V+ PF+ Q ++
Sbjct: 423 YAKVMESVRKVPGVVGQTPFIINQVMIASEGNVDGVIIKGIDPGTVGEVTDLPKNILGGG 482
Query: 108 -----GLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGI 162
+ ++ S ++ G++IG++LA +L +
Sbjct: 483 SLDILYTPEKIVHRGLPDEEPAEESGVEEDDIIRRSGTPKKAPVLPGIVIGRELAASLRV 542
Query: 163 SIGDKINILSPYGDV-TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE 221
+GD++N++SP G P G +S+++ V +F +YD+ VY+ L EAQ +F+++
Sbjct: 543 VVGDRVNVVSPLGTELGPSGPIPKSRAFRVAAIFYSGMYEYDSKFVYILLNEAQDFFDVK 602
Query: 222 NAVSGIEVFVKDPDAIEKTHENIVRILG-NGVVVIDWQQRYQIFFSCY 268
+GIE+ V D D + +V++LG DW + + FS
Sbjct: 603 G-ATGIELKVADIDDARRIASQVVKVLGGYPYRARDWGEMNKNLFSAL 649
>gi|257125646|ref|YP_003163760.1| hypothetical protein Lebu_0861 [Leptotrichia buccalis C-1013-b]
gi|257049585|gb|ACV38769.1| protein of unknown function DUF214 [Leptotrichia buccalis C-1013-b]
Length = 387
Score = 87.5 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 53/265 (20%), Positives = 102/265 (38%), Gaps = 21/265 (7%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
E +A+R++ + S S +GV I V IV ++V NG ++MI +L ++
Sbjct: 2 VEFFIAFRHVVERK------FQSIFSILGVAIAVTVFIVSLTVSNGLEKNMINSLLTMSP 55
Query: 67 HV-VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
H+ + ++ +Y I + I V V+P ++ Q+ + + +
Sbjct: 56 HILIKNRQKSFFENYNQIVENVKKIKGVKAVIPQINSQSIIKREGFAKGVLANGISPENV 115
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ L+ + N+S G + K+L +G I P
Sbjct: 116 KTDLKLRIIKGNNNISELNSVLIGEELSKELKLKVGDEISLVSAENKPLK---------- 165
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
V G+F+ F DYD+ ++ + LQ Q+ A + I + V+ P +E+T +
Sbjct: 166 ---LIVRGIFKTGFLDYDSNLIIVPLQTMQILSEQGQAATEIGIKVESPQKVEETLNQVN 222
Query: 246 RILG-NGVVVIDWQQRYQIFFSCYE 269
+ I W+ Q +
Sbjct: 223 NTINSQEYGAISWKTINQNLLRAVQ 247
>gi|194333901|ref|YP_002015761.1| hypothetical protein Paes_1079 [Prosthecochloris aestuarii DSM 271]
gi|194311719|gb|ACF46114.1| protein of unknown function DUF214 [Prosthecochloris aestuarii DSM
271]
Length = 419
Score = 87.1 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/278 (15%), Positives = 92/278 (33%), Gaps = 17/278 (6%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
E+ +A R+ F R + + I+ G+ +G ALI+ +S++ GF + ++++ + H
Sbjct: 4 ELYIARRFAFKQRSTSKPTFIVMIAVTGIAVGTTALILTLSIVKGFSVKIEEKLVAFSSH 63
Query: 68 VVIQQKYYP-LVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
+ ++Q RL I +V+ + PF+ + + + + +
Sbjct: 64 MQVRQSDGRLFYPLDADTRRLSHIDNVLSITPFMEKNVILQSRKGKKTLIQPAMLKGFNA 123
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGV---------------IIGKDLARNLGISIGDKINIL 171
+ + + + + G G + +
Sbjct: 124 AETPDFLRESIVDGESIAESGGNNLDILVGSSLAETLDIGPGSRVLVISTSKQATGALLA 183
Query: 172 SPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFV 231
V + + +D+ MV L Q +F+ + +SG E+ V
Sbjct: 184 GSDTIVDLLSNMDLELATVRGVYETGLNEGFDDYMVIADLGALQKHFH-PSRISGYEIMV 242
Query: 232 KDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
D + +T LG +RY F +
Sbjct: 243 NDLARLNETTRAAADTLGYPFYSYTVYERYANLFEWLK 280
>gi|162956012|gb|ABY25370.1| lipoprotein releasing system transmembrane protein [Bartonella
durdenii]
Length = 166
Score = 87.1 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 69/166 (41%), Positives = 103/166 (62%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
E ++A+RY+ N+K+ S+ S IS IG+M+GV ALIVVM+VMNGFR +++ R+LG+NGH
Sbjct: 1 EWMIAFRYMIPNKKHVVASVISIISLIGIMLGVFALIVVMAVMNGFRTELLNRILGMNGH 60
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+++Q + DY+ + + L+ + V LP V GQA V G GGSG LVRG+ D
Sbjct: 61 LIVQAVHSGFSDYKTLISSLESVNGVKFSLPVVEGQALVQGELEGGSGALVRGMRKQDLE 120
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSP 173
L+ FD+ +GV IG LA LG+++G + I++P
Sbjct: 121 KLKTVSQNIKLGSLAQFDKEEGVAIGSGLATKLGLTVGRDLRIITP 166
>gi|313156834|gb|EFR56274.1| efflux ABC transporter, permease protein [Alistipes sp. HGB5]
Length = 403
Score = 87.1 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/266 (16%), Positives = 98/266 (36%), Gaps = 4/266 (1%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
A RYLFS + + +++ S +S V + V A+IV++SV NGF + +
Sbjct: 2 LPQFFARRYLFSPKSRSVVNLISGLSVAAVAMPVAAMIVLLSVFNGFESLVKSMCSAFDA 61
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
+ + + + ++ + FV ++ + + VRG+ ++
Sbjct: 62 DLTVSARQGQTFAADAVDTAALRRIPGVEAMSFVLEESALLEHGDRQATATVRGVDDAYE 121
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG--- 183
+ S + G + ++IG+ +A LG+ ++
Sbjct: 122 AVFPLSDAVAAGEYRVRVGDLERLVIGQSMAYMLGVRTLADADVGVYAVRRGSFSSLLPF 181
Query: 184 -IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
++ LG + + V SL+ AQ F+ VSG+ + +++ + +
Sbjct: 182 DNYTRRTIPLGGVYTLDLETERTYVLASLRMAQELFSRPGRVSGLVLRLREGADAVQVRD 241
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + LG V + F+
Sbjct: 242 AVAQQLGGDYRVRTRYELRASFYRIM 267
>gi|323144193|ref|ZP_08078828.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Succinatimonas hippei YIT 12066]
gi|322416034|gb|EFY06733.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Succinatimonas hippei YIT 12066]
Length = 415
Score = 86.7 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 51/267 (19%), Positives = 97/267 (36%), Gaps = 5/267 (1%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+ R+ S R A SF S G+ +GV ALIV +S MNGF ++ RVL +
Sbjct: 2 LAFTLGLRFYRSKRYGALARFMSFASITGIAVGVFALIVGLSAMNGFEYELKNRVLSVIP 61
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS-- 124
I V+ + + L D++ V P V +A ++ + L+
Sbjct: 62 AAEITSNSPYFVNEKECIDSLLSSSDILAVAPVVRTEAVLNNGGNFAPIALLGVDPKKEA 121
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
++ S ++ D + VI+G++ AR L + GD + ++ G +
Sbjct: 122 KVIDIERFLSVKLDALNTDSENEYSVILGEECARRLNLLAGDSVKVILSNALKDNNGNPL 181
Query: 185 RSKSYTVLGMFRMRFP--DYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ VL + + D +S+ A+ +++ + + VKD +
Sbjct: 182 SRPADAVLKVVGTLKIGGELDASFALISIDSAKSILDIKGP-NSFHIKVKDMLNVRDEVL 240
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ W + +
Sbjct: 241 KAAVNFPQSAQLQTWMTTQGKLYHDIQ 267
>gi|73670882|ref|YP_306897.1| putative ABC transporter permease [Methanosarcina barkeri str.
Fusaro]
gi|72398044|gb|AAZ72317.1| putative ABC transporter permease protein [Methanosarcina barkeri
str. Fusaro]
Length = 389
Score = 86.7 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 45/266 (16%), Positives = 98/266 (36%), Gaps = 21/266 (7%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG- 63
R+E+ +A R + + + + +S + + VM L V ++M GF ++ +
Sbjct: 1 MRYELFIALRQIRARK------FQTILSVGAIALAVMVLTVSQALMVGFTGELYDTTVDK 54
Query: 64 -INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
V Q+ + Y+ + + + V V PF++G+A ++ + L +
Sbjct: 55 LPQVSVSPQEGEDYIYLYRTLIDEIGKTEGVTAVSPFLTGKASFKFKTNSLNAELKGVLP 114
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ G+ V+IG LA L ++ GD +++ P + +
Sbjct: 115 LQENDISAIEADMVEGDFRELEYSRNTVVIGSKLADKLEVNPGDSVDVSFPNANPLSLR- 173
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ D + Y SL AQ ++N+ + ++G+ V ++D + +
Sbjct: 174 ---------VVGIFHTGSPLDESLTYTSLDTAQEFYNVPDVINGLSVRLEDFNRDREVAA 224
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCY 268
I + G W +
Sbjct: 225 KIEK---TGYKAKGWTETNPEILRTI 247
>gi|330961361|gb|EGH61621.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. maculicola str. ES4326]
Length = 156
Score = 86.7 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 2 SIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+F + + RY + R+ +FIS S S IG+ +GV+A+IVV+SVMNGF+ +M R+
Sbjct: 25 RMFRPLPIFIGMRYTRAKRRKSFISFISMTSMIGLALGVLAMIVVLSVMNGFQREMSSRI 84
Query: 62 LGINGHVV 69
LG+ H V
Sbjct: 85 LGMVPHAV 92
>gi|256420720|ref|YP_003121373.1| hypothetical protein Cpin_1676 [Chitinophaga pinensis DSM 2588]
gi|256035628|gb|ACU59172.1| protein of unknown function DUF214 [Chitinophaga pinensis DSM 2588]
Length = 410
Score = 86.7 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 46/270 (17%), Positives = 98/270 (36%), Gaps = 7/270 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
R + VA R F NR ++F I+ + I V +I+ ++++NGF++ + +++
Sbjct: 1 MRLSLFVARRIAF-NRSSSFSRFIINIAVVATAISVAVMILAVALVNGFQQVIQQKIFSF 59
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKV-----LPFVSGQAFVSGLSSGGSGVLVR 119
GH+ I Q + V K+ + V+ A S + +
Sbjct: 60 WGHIHITQYQPNAGPLTEQVPFIGDSSIVEKLKNIKGITTVNAYATKSAIVKAEKDLEGV 119
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
D Y N +F ++ +L + K+N +
Sbjct: 120 IFKGVDRHYDWNHLQQFLQEGHAIRYNDSSYAPEVMISVSLAKELKLKLNDPLIVYFIQG 179
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLENAVSGIEVFVKDPDAIE 238
G R++ V G+F+ +YD + L+ + +++G E+F D I+
Sbjct: 180 AGQPPRARKLIVGGIFKTGIEEYDKTYILGDLELIRKLNDWKPGSIAGYEIFTNDYRNIQ 239
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ ++ + + ++ Y F+
Sbjct: 240 QIATKAYDVIPETLFMRSIEEIYPNIFAWL 269
>gi|298674349|ref|YP_003726099.1| hypothetical protein Metev_0382 [Methanohalobium evestigatum
Z-7303]
gi|298287337|gb|ADI73303.1| protein of unknown function DUF214 [Methanohalobium evestigatum
Z-7303]
Length = 388
Score = 86.0 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 36/264 (13%), Positives = 87/264 (32%), Gaps = 16/264 (6%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+E +A+R++ S R++ S S + V + + ++V+MS+++GFR ++I +
Sbjct: 2 YEFAIAFRHISSRRRH------SIFSVLSVALAIAMIVVLMSMVSGFRIELIDSTTENSP 55
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
H+++ + + + + K++ G S + + S+
Sbjct: 56 HIIV--------NPESDDEFIHLYRHLDKIIKQHEGVVATSPYFEKQVALDYKDNSHGVK 107
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
N + +D + + + N+ G+ +
Sbjct: 108 LKGVNPDAEMNVMHVDDDIIKGSFTDLSTIRNGIILGDKLAENLEVDLGERVDASSPVSG 167
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ D + Y L + Q + + + V+GI V V+D + I
Sbjct: 168 SVSFKVVGIMDTGTPKDETLAYSKLDDVQDFSDENDVVTGIGVRVQDIYQADNIAFYIED 227
Query: 247 ILGNGVVVIDWQQRYQIFFSCYES 270
+ W + +
Sbjct: 228 --NSAYEAESWLESNAEILELLNT 249
>gi|145219682|ref|YP_001130391.1| hypothetical protein Cvib_0874 [Prosthecochloris vibrioformis DSM
265]
gi|145205846|gb|ABP36889.1| protein of unknown function DUF214 [Chlorobium phaeovibrioides DSM
265]
Length = 423
Score = 86.0 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 48/281 (17%), Positives = 105/281 (37%), Gaps = 19/281 (6%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
E +A R+ F R + + I+ G+ +G ALI+ +SV+NGF + ++++ N H
Sbjct: 4 EFFIAGRFAFMQRSLSRPTFIVMIAVAGIALGTAALILTLSVVNGFAGSIEQKLISFNSH 63
Query: 68 VVIQQKYYP-LVDYQFIANRLDFIPDVIKVLPFVSGQAFVS------GLSSGGSGVLVRG 120
+ + ++ + + PD+ PF+ + + V+V+G
Sbjct: 64 MQFRYSDERLFMERRSQIAGILSHPDITDASPFLEKGCILMSSGGEKSGPAKSQPVMVKG 123
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINI---------- 170
++ + + G+ +G+ LA NLG+ GD + +
Sbjct: 124 VTPEAGKVFLDRYHHTEPLRGGGAADHLGLYLGRTLAENLGLKTGDTVMLVGIDKESAGG 183
Query: 171 --LSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIE 228
G V M + + T+ G++ + + + ++ A ++G +
Sbjct: 184 GGQEGGGSVVSMLSSLDIELGTIKGVYDTGLQEGFDDFLILTDLAALQARYAPGMITGFD 243
Query: 229 VFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ + T + + LG +RYQ F +
Sbjct: 244 ANTRNLQTVSTTAQQVAAGLGYPFYGYTVFERYQNMFEWLK 284
>gi|33519855|ref|NP_878687.1| ABC transporter integral membrane subunit [Candidatus Blochmannia
floridanus]
gi|33504200|emb|CAD83462.1| ABC transporter integral membrane subunit [Candidatus Blochmannia
floridanus]
Length = 405
Score = 86.0 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 58/272 (21%), Positives = 115/272 (42%), Gaps = 9/272 (3%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + + VA RY++ N ++S I +M+ + A+I+++SVMNGF ++ K
Sbjct: 1 MHMLL-VVLFVASRYIYGKTVNRLNQCIYWVSSIFIMLSMSAMIIILSVMNGFESELKKN 59
Query: 61 VLGINGHVVIQQKYYPLVDYQFIAN-RLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
+L + HVV+ + L I + I + + + S S ++
Sbjct: 60 LLYLIPHVVVTSTQGYINSKNIPDFLSLPAIKNNITYIKPLIFSDIILQSSKSISLGMMF 119
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY-GDVT 178
G+ + F L + NVS +IIG LA+ L ++I D+I + P T
Sbjct: 120 GVDPNHFEPLFDYLIHH--NVSQLISGKYYIIIGSALAQKLSVNIHDQIRLTVPSIHYNT 177
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAI 237
P+G + +T+L ++ + D+ V + +A + N ++G +++ +P +
Sbjct: 178 PIGCFPIQRLFTILDIYHSSNDEIDSCQVLVHKNDAAVLLNYPPQNITGWRIWIDEPFKV 237
Query: 238 EKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
K + + DW++ F +
Sbjct: 238 SKLEQW---QCPKDWIWTDWRKYKGSLFQAIK 266
>gi|119357127|ref|YP_911771.1| hypothetical protein Cpha266_1316 [Chlorobium phaeobacteroides DSM
266]
gi|119354476|gb|ABL65347.1| protein of unknown function DUF214 [Chlorobium phaeobacteroides DSM
266]
Length = 416
Score = 86.0 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 44/273 (16%), Positives = 106/273 (38%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ +A R+ F+ ++ +++ S IS G+++GV L+VVMSV+NGF++ + +
Sbjct: 1 MNIALWIARRFSFARKRFRVVNVISAISLAGIIVGVCTLLVVMSVLNGFQKLAWDLFVTL 60
Query: 65 NGH-VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ ++ + + + + + + V V PF+ G+A + G ++
Sbjct: 61 DSPVQIVPKTGRSMTISPQLLHSIAALQGVSSVEPFLEGEAVLVGSEKSELVMIKGLSEG 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ ++ + S ++ G+ + +L IS+ + ++ +
Sbjct: 121 AHNRLVKVTRSSAPFFTGDNVSVGEQLAYRTELRPFSEISLFSPELVAIGLESLSEPYLL 180
Query: 184 IRSKSYT-VLGMFRMRFPDYDNGMVYMSLQEAQL-YFNLENAVSGIEVFVKDPDAIEKTH 241
K + +D+ + S AQ + SG+++ + +K
Sbjct: 181 PALKISRSNVTTLFSLQKVFDDRFILASNSFAQEVLLLRADEYSGLDIRTNKAFSDKKLQ 240
Query: 242 ENIVRILGNG-----VVVIDWQQRYQIFFSCYE 269
+ L V+ +Q+Y+ F+ E
Sbjct: 241 AALREWLKENGMERGFVLRTLEQKYRDIFAVME 273
>gi|295087838|emb|CBK69361.1| ABC-type transport system, involved in lipoprotein release,
permease component [Bacteroides xylanisolvens XB1A]
Length = 414
Score = 85.6 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 59/280 (21%), Positives = 110/280 (39%), Gaps = 23/280 (8%)
Query: 5 SRFEVIVAWRYLF-SNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ +A R S+ + A I+ G+ IG+ +I+ ++V+ GF+ ++ +V+G
Sbjct: 1 MSLSLFIARRIYRESDGRKQVSRPAVLIAMAGIAIGLAVMIIAVAVVIGFKSEVRNKVIG 60
Query: 64 INGHVVIQ-------QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
H+ I + +P+V + L P++ V F + + + V
Sbjct: 61 FGSHIQITNLDAVSSYETHPIVVGDSMMTALADYPEISHVQRFSTKPGMIKTDDAFQGMV 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
L D +++ V +D V+I K LA + + +GDKI D
Sbjct: 121 LKGVGPEFDPHFIKEYLVEGEIPVFSDSVSTNQVLISKALATKMKLKLGDKIYTYYIQDD 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPD 235
+ R++ T+ G+++ F +YDN + L V+G+E+ VKD D
Sbjct: 181 I-------RARRLTIAGIYQTNFSEYDNLFLLTDLNLVNRLNGWQPEQVTGVELQVKDYD 233
Query: 236 AIEKTHENI-------VRILGNGVVVIDWQQRYQIFFSCY 268
+E I LG V + +Q F+
Sbjct: 234 KLEDITYEIATDIDNRQDELGGVYYVRNIEQLNPQIFAWL 273
>gi|297172323|gb|ADI23300.1| ABC-type transport system, involved in lipoprotein release,
permease component [uncultured actinobacterium
HF0770_13M05]
Length = 401
Score = 85.6 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 61/268 (22%), Positives = 116/268 (43%), Gaps = 19/268 (7%)
Query: 3 IFSRF-EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+ R V +A RYLF R N + ++ +++S +G+++GV L VV SVMNGF +++ R+
Sbjct: 6 LIKRLPSVWIALRYLF-RRDNVYAALINWVSLVGLVLGVTILTVVTSVMNGFDQEVKGRL 64
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
LG+ HV I++ + + + P VI V G+A +S + +
Sbjct: 65 LGVVPHVFIEKSV----LTEEDSEAVLATPGVIGVERLYQGEAMLSMPGVAQAVKVYGID 120
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ +++ +S S RG G+ +G+ L R +G++ GD I ++ P G
Sbjct: 121 TTDGGNFIADSMVS----GSLPLLRGAGIALGEPLVRLMGLARGDPIILVFPTSTG--SG 174
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ + + ++ F + D + + + Q + G V + DP +I
Sbjct: 175 IVPVVQRFQLVATFAVGADP-DYQLAIIDIARIQELGITDAGTLGWRVTLADPLSIGSWS 233
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L W +++ F E
Sbjct: 234 SPVDAPLN------TWAEQFGELFRAIE 255
>gi|330861384|emb|CBX71617.1| hypothetical protein YEW_FK23240 [Yersinia enterocolitica W22703]
Length = 198
Score = 85.2 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 41/190 (21%), Positives = 76/190 (40%), Gaps = 3/190 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMALI V+SVMNGF D+ +L
Sbjct: 1 MYQPVALFIGLRYMRGRASDRFGRFVSWLSTIGITLGVMALITVLSVMNGFERDLQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ +I L + A+ L + V V L S + +
Sbjct: 61 GMMPQALITTPQGSLDPNKIPASSLKSL---TGVTDIVPLTTADVVLQSARNLSAGVMLG 117
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++ + +I+G+ LA LG+ G+ + ++ P
Sbjct: 118 VDPNQHEPLADYLVNVHLKDLQPGSYNMILGEKLAGQLGVKRGETLRLMVPSASQFTPMG 177
Query: 183 GIRSKSYTVL 192
I S+ +
Sbjct: 178 RIPSQRLFNV 187
>gi|330982240|gb|EGH80343.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 95
Score = 85.2 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 44/67 (65%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + RY + R+ +FIS S S IG+ +GV+A+IVV+SVMNGF+ +M R+L
Sbjct: 1 MFRPLPIFIGMRYTRAKRRKSFISFISMTSMIGLALGVLAMIVVLSVMNGFQREMSSRIL 60
Query: 63 GINGHVV 69
G+ H V
Sbjct: 61 GMVPHAV 67
>gi|218263205|ref|ZP_03477403.1| hypothetical protein PRABACTJOHN_03086 [Parabacteroides johnsonii
DSM 18315]
gi|218222881|gb|EEC95531.1| hypothetical protein PRABACTJOHN_03086 [Parabacteroides johnsonii
DSM 18315]
Length = 418
Score = 85.2 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 57/285 (20%), Positives = 113/285 (39%), Gaps = 23/285 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISI-ASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
MSI E +A R FS N + I+ IG+ +G+ +I+ ++++ GF++++
Sbjct: 1 MSIALSLEYFIAKRIYFSKEGNRQATPPVVRIAMIGIALGLAVMILSVAIVIGFKKEIRN 60
Query: 60 RVLGINGHVVIQQKYYPLVDY-------QFIANRLDFIPDVIKVLPFVSGQAFVSGLSSG 112
+V+G H+ I + + L P + V F + + +
Sbjct: 61 KVIGFGSHIQITNFDNNASYESTPIAVSDSLLDYLKAFPGITHVEAFATKPGILKTDTDF 120
Query: 113 GSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILS 172
VL N D+++ +N+ V+I + LA LG+ +GD
Sbjct: 121 QGIVLKGVDENYDWTFFRNNLKEGELFTLPTDKASTDVLISRYLANLLGLKVGDSFLTYF 180
Query: 173 PYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFV 231
+V R++ + + G++ F DYD V +++ + + VSG+E+ V
Sbjct: 181 VQDEV-------RARKFHITGIYETGFVDYDKLFVIADIRQIRRLNGWAPDEVSGLELQV 233
Query: 232 KDPDAIEKTHENI-------VRILGNGVVVIDWQQRYQIFFSCYE 269
D D +++ E++ GN ++ + F E
Sbjct: 234 ADYDHLDRIAEDLYFDIAEKQDRNGNTYYTRSIKELNPMIFDWLE 278
>gi|229894471|ref|ZP_04509653.1| lipoprotein releasing system transmembrane protein LolC [Yersinia
pestis Pestoides A]
gi|229703490|gb|EEO90507.1| lipoprotein releasing system transmembrane protein LolC [Yersinia
pestis Pestoides A]
Length = 108
Score = 84.8 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 49/96 (51%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMALI V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRASDRFGRFVSWLSTIGITLGVMALITVLSVMNGFERNLQDTIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLP 98
G+ +I L + A+ L + V ++P
Sbjct: 61 GLMPQALITTPQGSLDPNKIPASTLKSLSGVSDIVP 96
>gi|213649272|ref|ZP_03379325.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Typhi str.
J185]
Length = 198
Score = 84.4 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 45/86 (52%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLD 88
G+ ++ ++ L Q ++
Sbjct: 61 GLMPQAILSAEHGSLNPNQMPEKAVN 86
>gi|262409009|ref|ZP_06085554.1| ABC transporter [Bacteroides sp. 2_1_22]
gi|294645612|ref|ZP_06723305.1| efflux ABC transporter, permease protein [Bacteroides ovatus SD CC
2a]
gi|294809930|ref|ZP_06768604.1| efflux ABC transporter, permease protein [Bacteroides xylanisolvens
SD CC 1b]
gi|298481870|ref|ZP_07000060.1| membrane protein [Bacteroides sp. D22]
gi|262353220|gb|EEZ02315.1| ABC transporter [Bacteroides sp. 2_1_22]
gi|292639057|gb|EFF57382.1| efflux ABC transporter, permease protein [Bacteroides ovatus SD CC
2a]
gi|294442776|gb|EFG11569.1| efflux ABC transporter, permease protein [Bacteroides xylanisolvens
SD CC 1b]
gi|298272092|gb|EFI13663.1| membrane protein [Bacteroides sp. D22]
Length = 414
Score = 84.4 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 59/280 (21%), Positives = 109/280 (38%), Gaps = 23/280 (8%)
Query: 5 SRFEVIVAWRYLF-SNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ +A R S+ A I+ G+ IG+ +I+ ++V+ GF+ ++ +V+G
Sbjct: 1 MSLSLFIARRIYRESDGGKQVSRPAVLIAMAGIAIGLAVMIIAVAVVIGFKSEVRNKVIG 60
Query: 64 INGHVVIQ-------QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
H+ I + +P+V + L P++ V F + + + V
Sbjct: 61 FGSHIQITNLDAVSSYETHPIVVGDSMMTALADYPEISHVQRFSTKPGMIKTDDAFQGMV 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
L D +++ V +D V+I K LA + + +GDKI D
Sbjct: 121 LKGVGPEFDPHFIKEYLVEGEIPVFSDSVSTNQVLISKALATKMKLKLGDKIYTYYIQDD 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPD 235
+ R++ T+ G+++ F +YDN + L V+G+E+ VKD D
Sbjct: 181 I-------RARRLTIAGIYQTNFSEYDNLFLLTDLNLVNRLNGWQPEQVTGVELQVKDYD 233
Query: 236 AIEKTHENI-------VRILGNGVVVIDWQQRYQIFFSCY 268
+E I LG V + +Q F+
Sbjct: 234 KLEDITYEIATDIDNRQDELGGVYYVRNIEQLNPQIFAWL 273
>gi|160886199|ref|ZP_02067202.1| hypothetical protein BACOVA_04206 [Bacteroides ovatus ATCC 8483]
gi|237723009|ref|ZP_04553490.1| ABC transporter [Bacteroides sp. 2_2_4]
gi|260173674|ref|ZP_05760086.1| ABC transporter, permease protein [Bacteroides sp. D2]
gi|293372562|ref|ZP_06618944.1| efflux ABC transporter, permease protein [Bacteroides ovatus SD CMC
3f]
gi|299146707|ref|ZP_07039775.1| putative membrane protein [Bacteroides sp. 3_1_23]
gi|315921936|ref|ZP_07918176.1| ABC transporter [Bacteroides sp. D2]
gi|156108084|gb|EDO09829.1| hypothetical protein BACOVA_04206 [Bacteroides ovatus ATCC 8483]
gi|229447531|gb|EEO53322.1| ABC transporter [Bacteroides sp. 2_2_4]
gi|292632371|gb|EFF50967.1| efflux ABC transporter, permease protein [Bacteroides ovatus SD CMC
3f]
gi|298517198|gb|EFI41079.1| putative membrane protein [Bacteroides sp. 3_1_23]
gi|313695811|gb|EFS32646.1| ABC transporter [Bacteroides sp. D2]
Length = 414
Score = 84.0 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 59/280 (21%), Positives = 109/280 (38%), Gaps = 23/280 (8%)
Query: 5 SRFEVIVAWRYLF-SNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ +A R S+ A I+ G+ IG+ +I+ ++V+ GF+ ++ +V+G
Sbjct: 1 MSLSLFIARRIYRESDGGKQVSRPAVLIAMAGIAIGLAVMIIAVAVVIGFKSEVRNKVIG 60
Query: 64 INGHVVIQ-------QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
H+ I + +P+V + L P++ V F + + + V
Sbjct: 61 FGSHIQITNLDAVSSYETHPIVVGDSMMTALADYPEISHVQRFSTKPGMIKTDDAFQGMV 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
L D +++ V +D V+I K LA + + +GDKI D
Sbjct: 121 LKGVGPEFDPHFIKEYLVEGEIPVFSDSVSTNQVLISKALATKMKLKLGDKIYTYYIQDD 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPD 235
+ R++ T+ G+++ F +YDN + L V+G+E+ VKD D
Sbjct: 181 I-------RARRLTIAGIYQTNFSEYDNLFLLTDLNLVNRLNGWQPEQVTGVELQVKDYD 233
Query: 236 AIEKTHENI-------VRILGNGVVVIDWQQRYQIFFSCY 268
+E I LG V + +Q F+
Sbjct: 234 RLEDITYEIATDIDNRQDELGGVYYVRNIEQLNPQIFAWL 273
>gi|255693659|ref|ZP_05417334.1| putative membrane protein [Bacteroides finegoldii DSM 17565]
gi|260620546|gb|EEX43417.1| putative membrane protein [Bacteroides finegoldii DSM 17565]
Length = 414
Score = 84.0 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 62/280 (22%), Positives = 109/280 (38%), Gaps = 23/280 (8%)
Query: 5 SRFEVIVAWRYLF-SNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ +A R S+ A I+ G+ IG+ +I+ ++V+ GF+ ++ +V+G
Sbjct: 1 MSLSLFIARRIYRESDSGKQVSRPAVLIAMAGIAIGLAVMIIAVAVVIGFKSEVRNKVIG 60
Query: 64 INGHVVIQ-------QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
H+ I + +P+V + LD P++ V F + + + V
Sbjct: 61 FGSHIQITNLDAVSSYETHPIVVGDSMMTALDGYPEISHVQRFSTKPGMIKTDDAFQGMV 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
L D +LQ V +D V+I K LA + + +GDKI D
Sbjct: 121 LKGVGPEFDPRFLQEYLVEGEIPVFSDSVSSNRVLISKSLATKMKLKLGDKIYTYYIQDD 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPD 235
V R++ T+ G+++ F +YDN + L V+G+E+ +KD D
Sbjct: 181 V-------RARRLTIAGIYQTNFSEYDNLFLLTDLSLVNRLNGWQPEQVTGVELQLKDYD 233
Query: 236 AIEKTHENI-------VRILGNGVVVIDWQQRYQIFFSCY 268
+E T I G V +Q F+
Sbjct: 234 KLEDTTYEIAIDTDNRKDEYGGTYYVRSIEQLNPQIFAWL 273
>gi|224437269|ref|ZP_03658241.1| hypothetical protein HcinC1_04812 [Helicobacter cinaedi CCUG 18818]
Length = 446
Score = 84.0 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 56/307 (18%), Positives = 101/307 (32%), Gaps = 42/307 (13%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ + RYL ++ FISI + ++F GV IGVM L V M++MNG ++ +++
Sbjct: 1 MKALILYLLPRYLRFDKTQPFISITALLAFFGVGIGVMVLCVAMAIMNGMTKEFERKLFV 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR---- 119
+N + + I L P++ QA ++ + ++
Sbjct: 61 MN-YPLSVYSTTYAGVDDEILQALKKQFPQFLFSPYLRYQAVGKVGNTMNAAMVFGVDMN 119
Query: 120 -----------------------------------GISNSDFSYLQNSFSRFYGNVSNDF 144
+S + NV
Sbjct: 120 AESQINEVVRKALESQEILQDSAESQSFNVSQKTNNTQDSSQTLKNTPQHIREQNVLAFS 179
Query: 145 DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDN 204
+ ++IGK N G+ + DK+++ + + G +K + + G F YD
Sbjct: 180 QKEFSILIGKGFEENFGLEVNDKLDLFFTQLEPSGFGYTPITKRFNIAGFFESGLRAYDE 239
Query: 205 GMVYMSLQEAQLYFNL-ENAVSGIEVFVKDP-DAIEKTHENIVRILGNGVVVIDWQQRYQ 262
Y +L Q L GI + P + I + + W Q+
Sbjct: 240 AYTYTNLSALQKIRRLPPGIYDGIHIHTPKPMEDITPIRNFLEIEFPQRAGIEGWWQQNG 299
Query: 263 IFFSCYE 269
FFS E
Sbjct: 300 NFFSAME 306
>gi|256419439|ref|YP_003120092.1| hypothetical protein Cpin_0392 [Chitinophaga pinensis DSM 2588]
gi|256034347|gb|ACU57891.1| protein of unknown function DUF214 [Chitinophaga pinensis DSM 2588]
Length = 409
Score = 84.0 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/270 (12%), Positives = 85/270 (31%), Gaps = 8/270 (2%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A RY + + I+I +++S + +G ALIV++SV NGF + V
Sbjct: 3 WQFASRYFRAKKSTNAINIIAWVSVSAIAVGAGALIVILSVFNGFEGLVKSLYSTFYPSV 62
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
I + + + + V + V G + + +S+++
Sbjct: 63 KISAVSGKSITLTPAQLKKIAGVKGVAYMTEVIEEKAVLRYGQGDQTIAILKGVDSNYNK 122
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLG-----ISIGDKINILSPYGDVTPMGMG 183
+ + + G + + +++ P +V+ +
Sbjct: 123 VAAVDKSMSRGKFDTGNEQDGYTAVLGIELEMALGVDVDRDLTPVSVYLPRRNVSSVTTP 182
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQ--EAQLYFNL-ENAVSGIEVFVKDPDAIEKT 240
+ +L + Y+ + L E+ +S +EV
Sbjct: 183 EDALGSGILYPAGSFAIQQEFNSKYVITNIAFMRGLLGLKEDEMSALEVKGASGLDDVVL 242
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ +LG + ++ Q ++ ++
Sbjct: 243 KRRLQEVLGADYNLQTRYEQNQALYAIMQT 272
>gi|21673929|ref|NP_661994.1| hypothetical protein CT1103 [Chlorobium tepidum TLS]
gi|21647070|gb|AAM72336.1| conserved hypothetical protein [Chlorobium tepidum TLS]
Length = 422
Score = 83.7 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 48/283 (16%), Positives = 105/283 (37%), Gaps = 18/283 (6%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ E+ +A R+ F R + + + IG+ +G ALI+ +S++NGF + +++
Sbjct: 1 MKAELYIARRFAFKPRSLSKPTFIVLAAVIGIAVGTAALILTLSIVNGFASVIEGKLIRF 60
Query: 65 NGH-VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSG------GSGVL 117
H V Q ++ + L +P ++ V PF+ + + + +
Sbjct: 61 TSHLQVRQPDERLFLETRRDLQTLKSVPGIVSVSPFLEMNVMLRSRAGKGDAGGEIAPAM 120
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
++GI + S + + D +++G+ LA LG+ GD++ I+ G
Sbjct: 121 IQGIDPRESSRFLQNGPELLESAPASADGSLPILLGRTLADKLGVKAGDQLLIVGIAGKN 180
Query: 178 TPMG-----------MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSG 226
G + V G++ + + ++ + + +SG
Sbjct: 181 GTSGITGKESVVELLSSLDLHVARVAGIYDTGLSEGFDDIIVFADLGRLQQLYHPDMISG 240
Query: 227 IEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
E V + ++ + LG +RY F +
Sbjct: 241 YEANVGNLRDLQAISATVASTLGYPFYSYTVYERYANLFEWLK 283
>gi|291297152|ref|YP_003508550.1| hypothetical protein Mrub_2783 [Meiothermus ruber DSM 1279]
gi|290472111|gb|ADD29530.1| protein of unknown function DUF214 [Meiothermus ruber DSM 1279]
Length = 375
Score = 83.7 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/267 (16%), Positives = 88/267 (32%), Gaps = 29/267 (10%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
RF +A R+L R S IS +GV +G+M L +S+ NGF + +++ L
Sbjct: 1 MRFVWFLALRHLRHRRTQ------SLISLLGVAVGIMVLTTALSLTNGFIKGLVEATLKA 54
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H+ P +V+ + L+ G +
Sbjct: 55 VPHI---------YLQSLNPEESPPPPPHPQVVGQAPVFLTKALLTRRAGDGRSAGADFA 105
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
L Y + + +++G L + P + + +
Sbjct: 106 TLIGLGEGGQAVYPELDLGQLKPGTIVLGSAL---------ARSLGAYPGDRLFLVSINQ 156
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ V+G F+ D G ++ LQ+ + A+SG ++ ++D + + + +
Sbjct: 157 KRIELRVVGTFQTGNYLLDAGFAFVPLQDVRALMEAPTALSGYQLRLRDAEQAPQVGQAL 216
Query: 245 VRILGNGVVVIDWQQRYQIFFS--CYE 269
G+ WQ + +
Sbjct: 217 A---GSHYFPQTWQSSNRTLIEQLALQ 240
>gi|330508355|ref|YP_004384783.1| ABC transporter permease [Methanosaeta concilii GP-6]
gi|328929163|gb|AEB68965.1| ABC transporter, permease protein [Methanosaeta concilii GP-6]
Length = 388
Score = 83.7 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 59/270 (21%), Positives = 112/270 (41%), Gaps = 21/270 (7%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M FS FE+ VA R++ ++ A ++ I+ +G+ + V LI+ +V NGF + M+
Sbjct: 1 MLAFSSFEIFVAMRHITYRKRQAALA----ITAVGMAVAVSLLII--AVQNGFSDYMLDI 54
Query: 61 VLGINGHVVIQQKY--YPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
V H++I+ L YQ + + + + V+ V P ++ A + + ++
Sbjct: 55 VFKSLPHIIIKPIDGENYLNLYQNVIDGVWGLEGVVGVSPVLAATATFTHEDKVANAAML 114
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
+ + N GK +++G+ LA L + +GD ++ P
Sbjct: 115 GVLPFE-ADKISKISESMVQGDLNSIIGGKKILLGRSLAEKLDMKLGDTVHADFPDAR-- 171
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+ TV G+F + D Y+SL+ AQ++ N N V+ I++ + D D +
Sbjct: 172 -------DLNLTVSGIFDTGYASVDEKTSYVSLETAQVFLNEGNVVTQIDIKLNDIDQAQ 224
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
I + V WQ+
Sbjct: 225 AVAGQISS---DRYEVQVWQESNPEIVESL 251
>gi|156306278|ref|XP_001617575.1| hypothetical protein NEMVEDRAFT_v1g225969 [Nematostella vectensis]
gi|156194640|gb|EDO25475.1| predicted protein [Nematostella vectensis]
Length = 356
Score = 83.7 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 44/248 (17%), Positives = 89/248 (35%), Gaps = 5/248 (2%)
Query: 28 ASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRL 87
S IS +G +G AL+VV+SV NGF + ++ + + I + + I
Sbjct: 1 ISGISIVGFAVGSFALVVVLSVFNGFEDLVVSLYNTFDPDIKITPAQGKVFNPDTIKYAE 60
Query: 88 DFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRG 147
D + + V + V + ++G+S Y G++ +
Sbjct: 61 LRNIDGVLHITEVLEENAVLKYDDKQTIATIKGVSKGFERYSGLDTMMIEGHMVLTENGN 120
Query: 148 KGVIIGKDLARNLGISIGDKIN-----ILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDY 202
I+G +AR L ++I + T K + +
Sbjct: 121 NYAILGYGIARFLSVNIDNYFTQIAVYTPKRGNTTTFDLDNAMVKKFITPSGIFSVEDNI 180
Query: 203 DNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQ 262
+N V + L A+ + +SG+E+ + +K I ++LG V + Q +
Sbjct: 181 NNKYVLVPLDFARQLLEYDREISGLEILLTPNADTKKVQRQIQQLLGESYEVKNRYQLQE 240
Query: 263 IFFSCYES 270
+ + + +
Sbjct: 241 VLYRVFNT 248
>gi|163754469|ref|ZP_02161591.1| putative lipoprotein releasing system transmembrane protein [Kordia
algicida OT-1]
gi|161325410|gb|EDP96737.1| putative lipoprotein releasing system transmembrane protein [Kordia
algicida OT-1]
Length = 403
Score = 83.3 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 44/273 (16%), Positives = 87/273 (31%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+F +A RYLFS I+I + + + V+IG +AL +V+S G + +
Sbjct: 1 MKFAFYIAKRYLFSKSSQNAINIINIFTSVVVVIGALALFIVLSGFAGLKTFSLSFSNDF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + I+ + V + V + +
Sbjct: 61 DPDIKIEAATGKSFRVSATQLQ-QLKEIPEIVSFSQVVEERVVLSLKNKHHIANIKGVDQ 119
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINI------LSPYGDVT 178
F + S Y + + +IG ++ LG+ D N+ +T
Sbjct: 120 YFRDVNAMDSIMYVGNWINPNAYDEAVIGFGVSNLLGVIAYDYSNLLEIIVPKPGTKSIT 179
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAI 237
K D D+ V+ +L AQ + N ++ IE +
Sbjct: 180 SSSKNPYEKVKVTTTGIYRINEDLDDKYVFTNLALAQELLEFDVNEITNIEFDLLATANE 239
Query: 238 EKTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ E I + N V++ + + + +
Sbjct: 240 TQVKEKIAAVFDNNVIIKNRIELNDALYKMLNT 272
>gi|86135203|ref|ZP_01053785.1| ABC transporter, permease protein [Polaribacter sp. MED152]
gi|85822066|gb|EAQ43213.1| ABC transporter, permease protein [Polaribacter sp. MED152]
Length = 400
Score = 83.3 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 44/270 (16%), Positives = 98/270 (36%), Gaps = 4/270 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RYLF+ N I+I + I+ GV++ +AL +++S +G R +
Sbjct: 1 MNFSYYIAKRYLFTKTSNNAINIITIIASFGVIVSSLALFIILSGFSGLRTFSYSLLDAS 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + I ++ I + + ++G+ +
Sbjct: 61 DPDLKITSVKGKSFLIDDAFTQILNDNSAIVTYSKIIEERVFLEYGDKNEVAFIKGVDTN 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVI---IGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ + + S + G+ + VI I L+ + ++ G
Sbjct: 121 YANVTKINESIYIGDWLDTTYANTAVIGRAIAIKLSLGVNSYGRPLTVMIPKPGKGFINP 180
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKT 240
K + +++N VY++L +A+ + N V+GIE+ + D
Sbjct: 181 NNAFYKIDVQILGLYTGTEEFENKFVYVTLNQAKNLLRFKHNQVTGIELKLADVTQSNTV 240
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ + +LG+ V +Q ++F+ +
Sbjct: 241 ADELQTLLGSAYKVQTKEQLNEVFYKVINT 270
>gi|225174342|ref|ZP_03728341.1| protein of unknown function DUF214 [Dethiobacter alkaliphilus AHT
1]
gi|225170127|gb|EEG78922.1| protein of unknown function DUF214 [Dethiobacter alkaliphilus AHT
1]
Length = 386
Score = 83.3 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 40/266 (15%), Positives = 98/266 (36%), Gaps = 16/266 (6%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+F + +AWR+L S + + + G+ IG+ + + ++NG + ++ +G
Sbjct: 1 MKFALSIAWRFLISGKGQ------TLLILAGIAIGISVQLFIGLLINGLQISLVDSTIGN 54
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ ++ + V + + ++ + + +S +
Sbjct: 55 ASQITVEAEQKNEVFSDWQEKEELILENIEGIRYTSPTLTLPAFISFDDNAEAAVFRGFL 114
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
N V++G+ L +L +++GD++ + G
Sbjct: 115 LEQADNIYGISSKIVAGNLPTSDGEVVVGEKLGDDLDLNVGDELTFFNFDGQ-------- 166
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ G F + + V +L+ AQ F ++VS +E+ ++D + I
Sbjct: 167 -RGEVIISGFFDLGVSSINESWVISTLETAQEIFERPDSVSALEIQIEDVFEADTLAGQI 225
Query: 245 VRIL-GNGVVVIDWQQRYQIFFSCYE 269
+L GN + V +W++ + S +
Sbjct: 226 AELLAGNELTVSNWKEANEELLSGLQ 251
>gi|262197157|ref|YP_003268366.1| hypothetical protein Hoch_3974 [Haliangium ochraceum DSM 14365]
gi|262080504|gb|ACY16473.1| protein of unknown function DUF214 [Haliangium ochraceum DSM 14365]
Length = 952
Score = 83.3 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 62/122 (50%)
Query: 148 KGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMV 207
GVI+GK+L +NL + G ++ I+SP + TP G R++ V G F +YD V
Sbjct: 692 PGVIVGKELVKNLHLYAGQEVRIISPLAEDTPAGPVPRTRYLRVAGTFFTGMYEYDFKYV 751
Query: 208 YMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSC 267
Y+ L QL+ ++ V GIE+ V++P + + L V DW++ + FS
Sbjct: 752 YVPLDTLQLFLDMAEQVEGIEIRVEEPAETDLVVRELRAALPETFRVQDWKEINRNLFSA 811
Query: 268 YE 269
+
Sbjct: 812 LK 813
Score = 54.4 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 21 KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
F + + +S GV IG MAL++V+SVM+GF D+ ++LG N H
Sbjct: 360 MRYFFTFFTTVSVAGVTIGSMALVIVLSVMSGFEIDLRNKILGSNAH 406
>gi|254514456|ref|ZP_05126517.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[gamma proteobacterium NOR5-3]
gi|219676699|gb|EED33064.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[gamma proteobacterium NOR5-3]
Length = 387
Score = 83.3 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 50/240 (20%), Positives = 91/240 (37%), Gaps = 6/240 (2%)
Query: 33 FIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPD 92
+G+++GV +LI V+SVMNGF ++ R+L + H ++ A
Sbjct: 1 MLGMLLGVASLITVLSVMNGFAGELRGRILALVPHGYVELTPTQTDSGSTDATAALSDSL 60
Query: 93 VIK----VLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
+ + + + G ++ GI S L +D +
Sbjct: 61 LAHPRILAVAPFVRETVLFSGPYRQQGAVLTGIDIKQQSALTELEQFMLVGSLDDLEPDF 120
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
V++G LAR LG+ GD + I+ P TP+G+ RS+ TV+G+F + + Y
Sbjct: 121 SVVLGASLARMLGVVPGDDVRIVLPQVRTTPLGLFPRSRLLTVVGLFEVGAQQDSV-LAY 179
Query: 209 MSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+SL A G+++ D ++ ++ W + F
Sbjct: 180 VSLNSADRLLKTGGT-RGLQIRTNDLMTAPGLQASLEPLIAGRGTYRPWSETQGSLFRAI 238
>gi|294673999|ref|YP_003574615.1| putative ABC transporter permease [Prevotella ruminicola 23]
gi|294473795|gb|ADE83184.1| putative ABC transporter, permease protein [Prevotella ruminicola
23]
Length = 415
Score = 83.3 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 51/275 (18%), Positives = 100/275 (36%), Gaps = 10/275 (3%)
Query: 5 SRFEVIVAWR-YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F + +A R Y K A I+ IGV IG+ +IV +SV+ GF+ + +V+G
Sbjct: 1 MNFPLYIAKRIYSDQGDKRKVSRPAIRIATIGVAIGLAVMIVTVSVVLGFKHTIRDKVVG 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFV-SGQAFVSGLSSGGSGVLVRGIS 122
H+ + D + + LP V + F + GI+
Sbjct: 61 FGSHIQVHNIMNYNGSDPHPICANDSLMKAVGKLPGVAKAERFSMTQGILKTDEDFLGIA 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ ++ + L + I+ ++ +
Sbjct: 121 IKGIAEEYDTTFLSQHLIAGNITSFSDKTSKYKLLVSKMIADKMRLKVGDKVFGYFIDNQ 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
+R++ +T+ G+++ +D + + L A +N +GIEV VKD + + +T
Sbjct: 181 DVRTRKFTISGIYQTNMTRFDETLCFTDLHTANKLNGWTDNQATGIEVLVKDFEKVNETA 240
Query: 242 ENIVRIL-------GNGVVVIDWQQRYQIFFSCYE 269
+ + GN + + Y FS E
Sbjct: 241 NQFIDNINRTSDEQGNSLTSETIYELYPQVFSWLE 275
>gi|294496366|ref|YP_003542859.1| hypothetical protein Mmah_1719 [Methanohalophilus mahii DSM 5219]
gi|292667365|gb|ADE37214.1| protein of unknown function DUF214 [Methanohalophilus mahii DSM
5219]
Length = 387
Score = 83.3 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 50/270 (18%), Positives = 104/270 (38%), Gaps = 24/270 (8%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +FE+ VA R++ ++ + +S + I VM L+V + M GF + + + +
Sbjct: 1 MPLKFELFVALRHIVYRKRQ------TILSVGAIGIAVMILVVSNAFMAGFTDKLYESTV 54
Query: 63 GINGH--VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
H + ++ + Y+ + + L I + V P ++G A + + + +
Sbjct: 55 NDMAHVTITPEENSEYIHLYKNLQSELYKINGIKAVSPSLAGDAVLRNEDNVKNVLFKGI 114
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + L S G+ G ++IG DLA L + + D+I I P +
Sbjct: 115 NPRDEDAVLSTSEDIIRGSFFGLATSGNTIVIGDDLADELEVGLDDRIEISFPGSETRFY 174
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ D+ + Y SLQ AQL++ + V+ I + + D + +
Sbjct: 175 RIIGVYD----------TNTPLDSTLTYTSLQTAQLFYATSDVVNSISIKLYDFNQDREI 224
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ I G W + ++
Sbjct: 225 AQQIEDK---GYSAEGWTETNPEI---LQT 248
>gi|193212651|ref|YP_001998604.1| hypothetical protein Cpar_0996 [Chlorobaculum parvum NCIB 8327]
gi|193086128|gb|ACF11404.1| protein of unknown function DUF214 [Chlorobaculum parvum NCIB 8327]
Length = 416
Score = 83.3 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 44/273 (16%), Positives = 100/273 (36%), Gaps = 18/273 (6%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A RY F+ ++ I+I S IS G+++GV L++VMSV+NGF++ + + V
Sbjct: 5 FWIASRYSFARKRFRVINIISGISLAGIVVGVSTLLIVMSVLNGFQQLARDLFVTVESPV 64
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + + ++ + + V+V+G++
Sbjct: 65 QLVPAEGRSMVVSDSLLAAIGKINGVQTVDPFVEGQAILSTPGKSELVMVKGVTPDAQRR 124
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ V G GV +G LA + + G ++ + SP + + +
Sbjct: 125 -----MQTGTGVRPPLFSGDGVSVGSLLAERMELYAGQRVRLFSPELISAGLQALSQPEL 179
Query: 189 YTV-------LGMFRMRFPDYDNGMVYMSLQEAQL-YFNLENAVSGIEVFVKDPDAIEKT 240
+ + +D+ V L + + SG++V + ++
Sbjct: 180 LPALSIGEARVESAFVLQQIFDDRYVLAPLSVGRTILLYGKERYSGLDVRPESGVRADEL 239
Query: 241 HENIVRI-----LGNGVVVIDWQQRYQIFFSCY 268
+ + LG V+ +++++ F+
Sbjct: 240 ERELRQWLAANGLGGKWTVMTLEEKHRELFAVM 272
>gi|328951578|ref|YP_004368913.1| protein of unknown function DUF214 [Marinithermus hydrothermalis
DSM 14884]
gi|328451902|gb|AEB12803.1| protein of unknown function DUF214 [Marinithermus hydrothermalis
DSM 14884]
Length = 375
Score = 83.3 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 42/267 (15%), Positives = 81/267 (30%), Gaps = 29/267 (10%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
R + +A ++L R S I+ +GV GVM L +S+ NGF ++ L
Sbjct: 1 MRLVLFLARKHLTYRRTQ------SLITVLGVAAGVMVLTTALSLTNGFTSALLHATLRA 54
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H+ + P ++ L+ G +
Sbjct: 55 IPHITLFAFDPQDAPP----------PHHPEIQAQTPFLPAKVLLTRRAQAGRNAGADFA 104
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ Y + + V++G LA LG P + + +
Sbjct: 105 TLLGVGEDAPAVYPGLGLEALEPGRVVLGAALAEALG---------ALPGDRLFAVSVNQ 155
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
R V G F D+ + +L++ + L A+ G + ++DP+ +
Sbjct: 156 RRHELVVAGTFTTGNYLIDSSFAFTTLEDVRTLLELPGAIGGYHLRLEDPERARAVARAL 215
Query: 245 VRILGNGVVVIDWQQRYQIFFS--CYE 269
+ WQ + +
Sbjct: 216 TQ--SGVFWAQTWQDANRTLIEQLALQ 240
>gi|317060658|ref|ZP_07925143.1| lipoprotein releasing system transmembrane protein lolE
[Fusobacterium sp. D12]
gi|313686334|gb|EFS23169.1| lipoprotein releasing system transmembrane protein lolE
[Fusobacterium sp. D12]
Length = 389
Score = 82.9 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 54/263 (20%), Positives = 101/263 (38%), Gaps = 16/263 (6%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
E +A +++ +K +F IS +GV IGV L V + + NG ++MI+ +L +
Sbjct: 2 IEFFIAKKHIVERKKQSF------ISVLGVFIGVTVLTVSIGISNGLDKNMIQSILSLTS 55
Query: 67 HV-VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
H+ V + DY+ I+ ++D I V +P ++ QA + GS + D
Sbjct: 56 HILVSDSTNQEITDYEEISEKIDQIKGVKGSIPMIATQAIIKYHGVFGSYTSGVKVEAYD 115
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ + + GK I + ++T +
Sbjct: 116 LEKAEKALELSSMLKEGKIEAGKKNGIYV-------GKELADSTGMKIGDEITMISAENT 168
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ G+F+ F +YD +V + L+ AQ I V +++P K E I
Sbjct: 169 EIPLQIAGVFQSGFYEYDVNLVLIPLEMAQYMSYRGRVADKINVRLQNPYDAPKAAEEIS 228
Query: 246 RILGNGVVVIDWQQRYQIFFSCY 268
+ G ++ + W + S
Sbjct: 229 QKFG--MMTMTWGTMNRNLLSAL 249
>gi|319787172|ref|YP_004146647.1| hypothetical protein Psesu_1571 [Pseudoxanthomonas suwonensis 11-1]
gi|317465684|gb|ADV27416.1| protein of unknown function DUF214 [Pseudoxanthomonas suwonensis
11-1]
Length = 400
Score = 82.9 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 45/275 (16%), Positives = 90/275 (32%), Gaps = 21/275 (7%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
E +A R+L R S + G+ +GV ++ V ++++G ++++I R LG
Sbjct: 3 IEATIAMRFLRQGRAQ------SLLILCGIAVGVAVIVFVTALISGLQQNLIDRTLGTQA 56
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS------------ 114
HV ++ + A L + + + ++
Sbjct: 57 HVRVEAPREVNLLAPAPAGTLQLVLEDPRPQSLRPIDDWLQVRDVIERLPEVTAVSPIVS 116
Query: 115 -GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSP 173
R ++ L Y V + + + + + L
Sbjct: 117 GPAFGRRGDATESVALVGIDLERYIRVIPLDEHVVEGRLEVGSGNGMIGNKLAEDLGLRT 176
Query: 174 YGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKD 233
G + R V G+F + + D VY+ L++AQ L V+ I+V V D
Sbjct: 177 GGKLRLDAGDGREAVINVSGIFELGVSELDARYVYLDLKQAQALLGLPGGVTVIDVTVDD 236
Query: 234 PDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
++T I + G+ W + +
Sbjct: 237 VFDADRTSARIRGL--TGLQAESWMETNAQLMNAL 269
>gi|193215890|ref|YP_001997089.1| hypothetical protein Ctha_2191 [Chloroherpeton thalassium ATCC
35110]
gi|193089367|gb|ACF14642.1| protein of unknown function DUF214 [Chloroherpeton thalassium ATCC
35110]
Length = 418
Score = 82.9 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 55/269 (20%), Positives = 104/269 (38%), Gaps = 8/269 (2%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH- 67
++A R++FS ++ I+I + IS +GV++GV + VVMSV+NGF++ L I+
Sbjct: 14 WLLAGRFVFSEKQMKVINIITGISILGVIVGVTTIAVVMSVLNGFQDLARALFLTIDSDV 73
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + + +++ +P+V FV G+A + G ++ N+
Sbjct: 74 QITAKIGNNFRVSDSLLSKIQSLPEVRSANRFVEGKAVIISERKSGVIMVKGFEKNALTE 133
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD-VTPMGMGIRS 186
+ + GK V L + + I I P+
Sbjct: 134 LGKIYEIGGRFPGNRSICVGKTVAYHYQLFMDSPVRIFGPKFIDEGLLALENPLMADFPE 193
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFN-LENAVSGIEVFVKDPDAIEKTHENIV 245
+ + +D V +SL +AQ F ++ VSGI+++ K + I
Sbjct: 194 PPVFQVKNYFAAHRSFDESYVLLSLSDAQEVFQFQKDRVSGIDIYAAKGLTDNKLKDAIE 253
Query: 246 RIL-----GNGVVVIDWQQRYQIFFSCYE 269
+L + V +Y+ F E
Sbjct: 254 ALLKHEGISEQLQVSSLSDKYEELFRVME 282
>gi|310778311|ref|YP_003966644.1| protein of unknown function DUF214 [Ilyobacter polytropus DSM 2926]
gi|309747634|gb|ADO82296.1| protein of unknown function DUF214 [Ilyobacter polytropus DSM 2926]
Length = 405
Score = 82.9 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 54/262 (20%), Positives = 100/262 (38%), Gaps = 16/262 (6%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
E +A +++ +K S IS +G+ IG+ LIV + + NG ++MI+ +L I
Sbjct: 20 IEFFIAKKHIIERKKQ------SIISILGMTIGIAVLIVSIGIANGLDKNMIESILSITS 73
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
HVV+Q +++ I V V+P S Q + GS V I D
Sbjct: 74 HVVVQDNGDMENYRDIQK-KIESIEGVKGVVPKTSTQGILKYNGVLGSYVSGVKIEGLDL 132
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ + + V D + + + +V+ + R
Sbjct: 133 ADAKRAMELDKKIVQGTMDFDNPTQLL-------MGKELYEQLGANLGDEVSIVSADNRE 185
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ + G+F+ + +YD +V + L+ Q+ N VS ++V + D ++ I
Sbjct: 186 VRFKIGGVFQSGYYEYDTSLVMLPLRAVQVLTYSGNTVSKMDVMLYDAYKSDEVASEINS 245
Query: 247 ILGNGVVVIDWQQRYQIFFSCY 268
G+ W Q + S
Sbjct: 246 T--TGLNTKTWGQLNRNLLSAL 265
>gi|257463054|ref|ZP_05627456.1| lipoprotein releasing system transmembrane protein lolE
[Fusobacterium sp. D12]
Length = 398
Score = 82.5 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 54/263 (20%), Positives = 101/263 (38%), Gaps = 16/263 (6%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
E +A +++ +K +F IS +GV IGV L V + + NG ++MI+ +L +
Sbjct: 11 IEFFIAKKHIVERKKQSF------ISVLGVFIGVTVLTVSIGISNGLDKNMIQSILSLTS 64
Query: 67 HV-VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
H+ V + DY+ I+ ++D I V +P ++ QA + GS + D
Sbjct: 65 HILVSDSTNQEITDYEEISEKIDQIKGVKGSIPMIATQAIIKYHGVFGSYTSGVKVEAYD 124
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ + + GK I + ++T +
Sbjct: 125 LEKAEKALELSSMLKEGKIEAGKKNGIYV-------GKELADSTGMKIGDEITMISAENT 177
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ G+F+ F +YD +V + L+ AQ I V +++P K E I
Sbjct: 178 EIPLQIAGVFQSGFYEYDVNLVLIPLEMAQYMSYRGRVADKINVRLQNPYDAPKAAEEIS 237
Query: 246 RILGNGVVVIDWQQRYQIFFSCY 268
+ G ++ + W + S
Sbjct: 238 QKFG--MMTMTWGTMNRNLLSAL 258
>gi|154494208|ref|ZP_02033528.1| hypothetical protein PARMER_03556 [Parabacteroides merdae ATCC
43184]
gi|154086070|gb|EDN85115.1| hypothetical protein PARMER_03556 [Parabacteroides merdae ATCC
43184]
Length = 414
Score = 82.5 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 52/281 (18%), Positives = 108/281 (38%), Gaps = 23/281 (8%)
Query: 5 SRFEVIVAWRYLFSNRK-NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
E +A R FS I+ IG+ +G+ +I+ ++++ GF++++ +V+G
Sbjct: 1 MSLEYFIAKRIYFSKEGDRQATPPVVRIAMIGIALGLAVMILSVAIVIGFKKEIRNKVIG 60
Query: 64 INGHVVIQQKYYPLVDY-------QFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
H+ I + L P + V F + + S V
Sbjct: 61 FGSHIQITNFDNNASYESTPIAVSDTLLEHLKTFPGITHVEGFATKPGILKTDSDFQGIV 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
L + D+++ +N+ + V++ + LA LG+ +GD +
Sbjct: 121 LKGVGRDYDWTFFRNNLKEGELFILPTDKVSTDVLLSRYLANLLGLKVGDSFLTYFVQDE 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPD 235
V R++ + + G++ F DYD V +++ + + VSG+E+ V D D
Sbjct: 181 V-------RARKFRITGIYETGFVDYDKLFVIADIRQIRRLNGWAPDEVSGLELQVDDYD 233
Query: 236 AIEKTHENI-------VRILGNGVVVIDWQQRYQIFFSCYE 269
+++ E++ GN ++ + F E
Sbjct: 234 HLDRVAEDLYFDIAEKQDRNGNTYYTRSIKELNPMIFDWLE 274
>gi|328725182|ref|XP_001946386.2| PREDICTED: NAD-dependent deacetylase-like, partial [Acyrthosiphon
pisum]
Length = 440
Score = 82.5 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 43/279 (15%), Positives = 91/279 (32%), Gaps = 32/279 (11%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GV+AL+ V+SVMNGF ++ +L
Sbjct: 22 MYQPVALFIGLRYMRGRASDRFGRFVSWLSTIGITLGVLALVTVLSVMNGFERELEGNIL 81
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++ + Q A L V L S + + +
Sbjct: 82 GLMPQALVTSDKGSINPQQVTAESLKL----QGVTRVAPLTTADVVLQSARNVSVGVMLG 137
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + VI+G+ LA L + GD++ ++ P
Sbjct: 138 INPDEQDPLTPYLVNTQQNVLQPGQYNVILGEQLASQLSVKRGDQLRLMVPTRIFERDRK 197
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSL--------------QEAQLYFNLENAVSGI- 227
+ + + + + + V G
Sbjct: 198 AELAAHPQPRVVVLTGAGISAESGIQTFRAADGLWEEHRVEDVATPEGFHRNPDLVQGFY 257
Query: 228 ----------EVFVKDPDAIEKTHENIVRILGNGVVVID 256
E+ P+A K + ++LG+ +++
Sbjct: 258 NARRRQLQQPEIQ---PNAAHKALAELEQVLGDNFLLVT 293
>gi|257452076|ref|ZP_05617375.1| lipoprotein releasing system transmembrane protein lolE
[Fusobacterium sp. 3_1_5R]
gi|317058624|ref|ZP_07923109.1| lipoprotein releasing system transmembrane protein lolE
[Fusobacterium sp. 3_1_5R]
gi|313684300|gb|EFS21135.1| lipoprotein releasing system transmembrane protein lolE
[Fusobacterium sp. 3_1_5R]
Length = 389
Score = 82.5 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 53/263 (20%), Positives = 102/263 (38%), Gaps = 16/263 (6%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
E +A +++ +K +F IS +GV IGV L V + + NG ++MI+ +L +
Sbjct: 2 IEFFIAKKHIVERKKQSF------ISMLGVFIGVTVLTVSIGISNGLDKNMIQSILSLTS 55
Query: 67 HV-VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
H+ V +VDY+ ++ +++ I V +P +S QA + G+ + D
Sbjct: 56 HILVSDSTNQEIVDYEELSEKINQIKGVKGSIPMISTQAIIKYHGVFGNYTSGVKVEAYD 115
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ + D K I + ++T +
Sbjct: 116 LEKAEKALELSSMIKEGKIDIEKKNGIYV-------GKELADSTGMKIGDEITMVSAENT 168
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ G+F+ F DYD +V + L+ AQ V I V +++P + + I
Sbjct: 169 EIPLQIAGVFQSGFYDYDVNLVLLPLEMAQYMSYRGQVVDKINVRLQNPYDAPRVADEIS 228
Query: 246 RILGNGVVVIDWQQRYQIFFSCY 268
+ L ++ + W + S
Sbjct: 229 QNLS--MMTMTWGNMNRNLLSAL 249
>gi|257466125|ref|ZP_05630436.1| lipoprotein releasing system transmembrane protein lolE
[Fusobacterium gonidiaformans ATCC 25563]
gi|315917283|ref|ZP_07913523.1| lipoprotein releasing system transmembrane protein lolE
[Fusobacterium gonidiaformans ATCC 25563]
gi|313691158|gb|EFS27993.1| lipoprotein releasing system transmembrane protein lolE
[Fusobacterium gonidiaformans ATCC 25563]
Length = 389
Score = 82.5 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 53/263 (20%), Positives = 102/263 (38%), Gaps = 16/263 (6%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
E +A +++ +K +F IS +GV IGV L V + + NG ++MI+ +L +
Sbjct: 2 IEFFIAKKHIVERKKQSF------ISMLGVFIGVTVLTVSIGISNGLDKNMIQSILSLTS 55
Query: 67 HV-VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
H+ V +VDY+ ++ +++ I V +P +S QA + G+ + D
Sbjct: 56 HILVSDSTNQEIVDYEELSEKINQIKGVKGSIPMISTQAIIKYHGVFGNYTSGVKVEAYD 115
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ + D K I + ++T +
Sbjct: 116 LEKAEKALELSSMIKEGKIDIEKKNGIYV-------GKELADSTGMKIGDEITMVSAENT 168
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ G+F+ F DYD +V + L+ AQ V I V +++P + + I
Sbjct: 169 EIPLQIAGVFQSGFYDYDVNLVLLPLEMAQYMSYRGQVVDKINVRLQNPYDAPRVADEIS 228
Query: 246 RILGNGVVVIDWQQRYQIFFSCY 268
+ L ++ + W + S
Sbjct: 229 QNLS--MMTMTWGNMNRNLLSAL 249
>gi|21672564|ref|NP_660631.1| hypothetical protein BUsg286 [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|25091614|sp|Q8K9N7|Y286_BUCAP RecName: Full=Uncharacterized membrane protein BUsg_286
gi|21623191|gb|AAM67842.1| hypothetical 45.3 kDa protein [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 413
Score = 82.1 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 54/266 (20%), Positives = 112/266 (42%), Gaps = 1/266 (0%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ ++A R N KN + + S +S IG+ I + LI+ S +NGF+ + K +L
Sbjct: 1 MNFLPFLIAKRLYHRNNKNHAVLLVSILSKIGISISIFTLILSFSALNGFQILIKKNILS 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
H +I+ ++ I +L+ +P+VI P+V + + + +
Sbjct: 61 SLPHGIIELTNTSAFTWKDITKKLESLPEVIYSEPYVLMNSVLLKNDKMRFINIKSFKNI 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + Y +II DLA+ + GD IN++ ++
Sbjct: 121 KYIKKYFSFQKKLYNFSKLKKIYNNEIIISSDLAKYFSLKEGDCINLIILNKKISFDKTQ 180
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
I+S S+ V +F ++ + + Q +FN++N ++ IE+++ DP +K
Sbjct: 181 IQSFSFKVKSIFHSNGIS-NSNIGLIPFIFFQKFFNIKNNINKIELYMSDPFQADKIILK 239
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
I + + + +W Y+ + +
Sbjct: 240 IAKKIKTPLFFYNWMYSYKYIYHDIK 265
>gi|298376067|ref|ZP_06986023.1| membrane protein [Bacteroides sp. 3_1_19]
gi|298267104|gb|EFI08761.1| membrane protein [Bacteroides sp. 3_1_19]
Length = 414
Score = 82.1 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 55/280 (19%), Positives = 115/280 (41%), Gaps = 23/280 (8%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASF-ISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
E+ +A + FS + ++ + I+ IG+ +G+ +I+ ++++ GF++++ +V+G
Sbjct: 1 MNLELFIAKKIHFSKEGDREVTPPAVRIAMIGIALGLAVMILSVAIVIGFKKEVRNKVIG 60
Query: 64 INGHVVIQQKYYPLVDYQFIA-------NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
H+ I N LD P + V F + + V
Sbjct: 61 FGSHIQITNFDSNSSYESQPIAVSDTLLNALDAFPGIRHVEKFATKLGILKTDQDFQGIV 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
L ++ D+++ +++ VII K L+ LG+ +GD D
Sbjct: 121 LKGVDTDYDWTFFKDNLKEGEIFTIQPDKNSTDVIISKYLSDLLGLKVGDSFLTYFVQDD 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPD 235
V R++ +T+ G++ F DYD V +++ + + + VSG+E+ V D D
Sbjct: 181 V-------RARKFTITGIYETGFLDYDKMFVIADIKQIRRLNGWDKDQVSGLELQVDDYD 233
Query: 236 AIEKTHENI-------VRILGNGVVVIDWQQRYQIFFSCY 268
+++ E+I GN ++ + F+
Sbjct: 234 RLDQVAEDIYFDLTERQDRNGNTFYARSIKELNPMIFNWL 273
>gi|262037423|ref|ZP_06010887.1| lipoprotein releasing system transmembrane protein LolE
[Leptotrichia goodfellowii F0264]
gi|261748585|gb|EEY35960.1| lipoprotein releasing system transmembrane protein LolE
[Leptotrichia goodfellowii F0264]
Length = 387
Score = 82.1 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 49/263 (18%), Positives = 102/263 (38%), Gaps = 19/263 (7%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
E+ +A R++ + S S +GV I V +V ++V NG ++M+ +L ++
Sbjct: 2 VELFIAVRHILERK------FQSIFSVLGVAIAVTVFVVSLTVSNGLNKNMVNSLLTLSP 55
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
H++I+ + +K + V + +
Sbjct: 56 HILIKNAKDSYF---ESYQDILEKTKGMKDVKAVIPEIRSQSIIKYNELAKGVLADGISA 112
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
++N + ND G V++GK LA +GI +G++++++S
Sbjct: 113 ENVKNDLKLKIIDGKNDISEGNSVLVGKVLAEEMGIKVGEELSLVSAENKEIK------- 165
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
V G+F+ YD+ +V + L+ Q+ F A + + + V++P +E T ++
Sbjct: 166 --LIVRGIFKTGGLPYDSNLVIVPLKTMQIMFERGEAATEVGILVENPQKVENTVGTVMS 223
Query: 247 ILGN-GVVVIDWQQRYQIFFSCY 268
V W+ + S
Sbjct: 224 KFPESDYKVQSWKVVNEGLLSAV 246
>gi|218661192|ref|ZP_03517122.1| lipoprotein ABC transporter, permease protein [Rhizobium etli
IE4771]
Length = 344
Score = 82.1 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 76/194 (39%), Positives = 107/194 (55%)
Query: 76 PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSR 135
P DY +A+RL +P V LP V GQ S + G +G LVRG D + L+
Sbjct: 3 PFTDYPELASRLAAVPGVKMALPLVEGQVLASAQAGGSTGALVRGARAEDLTKLKTISDN 62
Query: 136 FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMF 195
+ G+GV+IG +A LG+ +GD I + SP GDVTPMG+ R KSY + G+F
Sbjct: 63 IKSGDMVGYASGEGVLIGTRMADQLGLRVGDLITLTSPEGDVTPMGVNPRVKSYKISGLF 122
Query: 196 RMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVI 255
+ +YD+ +++M L+EAQLYFN V IE+FV PD I+ + G + +
Sbjct: 123 EIGMSEYDSSIIFMPLEEAQLYFNAAGLVQSIELFVDHPDDIDALRPKVEEAAGRQINLT 182
Query: 256 DWQQRYQIFFSCYE 269
DW+QR Q FFS +
Sbjct: 183 DWRQRNQTFFSALQ 196
>gi|220918652|ref|YP_002493956.1| protein of unknown function DUF214 [Anaeromyxobacter dehalogenans
2CP-1]
gi|219956506|gb|ACL66890.1| protein of unknown function DUF214 [Anaeromyxobacter dehalogenans
2CP-1]
Length = 405
Score = 82.1 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 53/277 (19%), Positives = 107/277 (38%), Gaps = 21/277 (7%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
FE+ VA R+L R + + G +GV ++ + +++ G + ++++ LG
Sbjct: 1 MPFELFVALRFLREGRAQ------TALVLGGATVGVGVIVFLTALIGGLQATLVEQTLGS 54
Query: 65 NGHVVIQQKYY-----PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
HVV+++ P + +A ++ IP+ + + V + G
Sbjct: 55 QAHVVLRRPERVPKALPPGPGEALAALVEKIPERDRSVEQWPEVLAVVRGAPGVVSATPT 114
Query: 120 GISNSDFSY--------LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL 171
++ S L+ + V R K + ++ L
Sbjct: 115 AAGSAFASRAGVSRAVALRGVEPGSFDGVIQMSRRMKAGAFRVGGEEAVIGAVLADELGL 174
Query: 172 SPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFV 231
+ + RS +TV G+F + D + V +SL+ AQ +L+ ++GIE+ V
Sbjct: 175 AVGDKLRITSAESRSDLFTVAGIFDLGSRDVNQRWVLVSLRAAQTLLDLQGGITGIELKV 234
Query: 232 KDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+DP A E+ ++ G++ W Q Q +
Sbjct: 235 RDPFAAERVARSLAAR--TGLLAESWMQLNQQLLTAL 269
>gi|213420792|ref|ZP_03353858.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Typhi str.
E01-6750]
Length = 124
Score = 82.1 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 45/86 (52%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLD 88
G+ ++ ++ L Q ++
Sbjct: 61 GLMPQAILSAEHGSLNPNQMPEKAVN 86
>gi|205356666|ref|ZP_03223427.1| putative integral membrane protein [Campylobacter jejuni subsp.
jejuni CG8421]
gi|205345404|gb|EDZ32046.1| putative integral membrane protein [Campylobacter jejuni subsp.
jejuni CG8421]
Length = 375
Score = 81.7 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 49/242 (20%), Positives = 103/242 (42%), Gaps = 10/242 (4%)
Query: 30 FISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDF 89
++F+GV +G+ L+V M++MNGF ++ KR +N + I K+Y V+ +FI
Sbjct: 2 LLAFLGVCVGLCVLLVAMAIMNGFDKEFEKRFFVMNYPITILPKFYAPVNDEFIDELRKT 61
Query: 90 IPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKG 149
P+++ V + G ++ G++ +D + ++ + +
Sbjct: 62 FPNLLF--SPYLSTQVVVKGDNRFEGGVLFGVNFNDEKKINEVVAKALKDENLSGFD--- 116
Query: 150 VIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYM 209
+++G L G+ DK++++ + + + ++K + V F YD +Y
Sbjct: 117 ILVGSALTDEFGLHKNDKLSLIFSNLNPSGFSLVPQTKRFDVKARFTSGLAFYDKAYMYT 176
Query: 210 SLQEAQLYFNLEN--AVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSC 267
+ + + GI V+ + K E I L + V+ W ++ + FFS
Sbjct: 177 DVDALKKVLGIPKNPNYDGIHVYSDNAF---KDVEKIKSYLKDDYAVVGWWEQNKNFFSA 233
Query: 268 YE 269
E
Sbjct: 234 LE 235
>gi|310659848|ref|YP_003937569.1| integral membranepermease [Clostridium sticklandii DSM 519]
gi|308826626|emb|CBH22664.1| putative Integral membrane protein (Permease) [Clostridium
sticklandii]
Length = 398
Score = 81.7 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 43/265 (16%), Positives = 90/265 (33%), Gaps = 13/265 (4%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+E +A R+L + + +G+ +GV I + S+++G +E++I +G
Sbjct: 3 YEWKIALRFLKDGKAQ------TLFILLGIAVGVAVQIFLSSLISGLQENLIDTTIGNRA 56
Query: 67 HVVIQQKYYPLVDYQFIANRLDFI------PDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
H+ I K V+ + + + + S L
Sbjct: 57 HITITAKANSNVNSPYFEYINTPKKEDKLGNYQGIIEGLQKNKEISAVSPSVVGTALYNQ 116
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+S ++ + N R D R L + L+P +
Sbjct: 117 GESSTSLVVKGIDLELADEIYNLKSRIAQGESDIDSNRVLIGTSFANEFNLTPGDLINLS 176
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G +S+ V G+F + + ++M L AQ + L +S IE+ + +P +
Sbjct: 177 LPGESVQSFIVGGIFDLESEALNGSWIFMELSRAQRIYGLNGYISNIEIQMNEPFDADIL 236
Query: 241 HENIVRILGNGVVVIDWQQRYQIFF 265
++ + + DW+
Sbjct: 237 APRLMTLYPE-IDASDWKAENAQLL 260
>gi|325282886|ref|YP_004255427.1| hypothetical protein Deipr_0649 [Deinococcus proteolyticus MRP]
gi|324314695|gb|ADY25810.1| protein of unknown function DUF214 [Deinococcus proteolyticus MRP]
Length = 404
Score = 81.7 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 43/262 (16%), Positives = 83/262 (31%), Gaps = 17/262 (6%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
R ++A +L R ++ G+ +GV LI +S+ NGF ++ L
Sbjct: 20 RRLPWLLARAHLSKRRTQN------LLTVAGIAVGVAVLIAALSLTNGFTGALVSATLRA 73
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ H + Q Y P + L +V PF++ +A ++ + +
Sbjct: 74 SPH-LSVQPYTPGGQDPAMEQALAGNSEVAAFTPFLADKALLTRPADEYREAGTDFSTLF 132
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
I + + + P + + G
Sbjct: 133 GVGPQAADVLELRPEEGQLLRSLGSGEIL-------LGAALARNIGVYPGEHINLLNSGQ 185
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + TV G+F D+G + SL Q +SG ++ + DP+ + + +
Sbjct: 186 QRREMTVKGVFHTGNYLIDSGYAFTSLGTLQEVQG-SGHISGYQIRLADPEQAPQVGQAL 244
Query: 245 VRILGNGVVVIDWQQRYQIFFS 266
L WQ Y
Sbjct: 245 TAGLP--YAATPWQSLYGTLLD 264
>gi|189501800|ref|YP_001957517.1| hypothetical protein Aasi_0365 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497241|gb|ACE05788.1| hypothetical protein Aasi_0365 [Candidatus Amoebophilus asiaticus
5a2]
Length = 407
Score = 81.7 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/266 (14%), Positives = 81/266 (30%), Gaps = 5/266 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A RY + K I S I+ + V +G MAL+VV+S+ NG + + +
Sbjct: 4 AFFIAKRYFSTKSKGNLIYRMSLIACLSVALGTMALLVVLSIFNGLEGVVRRLFYAFDPD 63
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ I+ K + + V + + ++G+S +
Sbjct: 64 IKIELKQGKYFSISPELIHKIESVSEVTKVVEVIEENVLFTYHGHQLVAKLKGVSRNFVQ 123
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARN-----LGISIGDKINILSPYGDVTPMGM 182
+ G + + D ++G + I ++
Sbjct: 124 DCPLATHIIQGKLELEQDGHNFALVGAGIQYALSIRLNNIFEELQVFYPKNNKLSALTAQ 183
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + G +D V + L A + + +EV V +I K +
Sbjct: 184 NLYQTGWIKPGAIFAIEKHFDENYVIVPLNFATNLLGNSDKRTALEVQVMQGSSIAKVQK 243
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L V++ ++
Sbjct: 244 ALQTFLPQEFKVLNRDEQQMTLMQTI 269
>gi|121602999|ref|YP_980328.1| hypothetical protein Pnap_0081 [Polaromonas naphthalenivorans CJ2]
gi|120591968|gb|ABM35407.1| protein of unknown function DUF214 [Polaromonas naphthalenivorans
CJ2]
Length = 420
Score = 81.7 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 55/282 (19%), Positives = 98/282 (34%), Gaps = 24/282 (8%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
FE++VA R+L R S + GV GV +I + ++N + +I RVLG
Sbjct: 16 MPFELLVALRFLREGRMQ------SVLILAGVTGGVAVIIFLTQLINQLQSTIIDRVLGS 69
Query: 65 NGHVVIQQKYYPLVDY-------------QFIANRLDFIPDVIKVLPFVSGQAFVSGLSS 111
HVVI+ Q RL + ++ + V +S
Sbjct: 70 QAHVVIRPLEEVTQRVVTPSEDRAVAAVVQPRDQRLRSVDQWERIAGLAAATPGVLAVSP 129
Query: 112 GGSGVLVRGI-SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINI 170
SG +++ L Y V D + L
Sbjct: 130 VVSGPAFASRGNSNKSVALLGVQPDAYRRVVRMDDYMTRGRFDVTGSNTLIGVDLASDLG 189
Query: 171 LSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVF 230
++ + R+++ + G+F M D + V+++L+ AQ +L VS I++
Sbjct: 190 VTVGDKLRVTSASGRTETLDITGLFDMGNRDLNRRWVFVTLKLAQTLLDLPGGVSNIDLT 249
Query: 231 VKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY--ES 270
VKD + + + G+ V W Q + ++
Sbjct: 250 VKDLFGANQVADALRAQ--TGLTVDSWMQTNSGLLNALSNQT 289
>gi|188996768|ref|YP_001931019.1| protein of unknown function DUF214 [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188931835|gb|ACD66465.1| protein of unknown function DUF214 [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 417
Score = 81.7 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 51/279 (18%), Positives = 99/279 (35%), Gaps = 29/279 (10%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A ++L ++ F+SI GV IGV A IV+ S+MNGF++ +++ + +N H+
Sbjct: 5 LFLALKFLVERKRQTFVSIV------GVGIGVAAFIVMASLMNGFQKYFVEQAIDLNAHI 58
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
++ K + D D I VI + ++ +
Sbjct: 59 TLKTKPEDIPDRILKIYYGDKIIPVILGSKPPEKKDKITDYKFIIEKYSNNPDILGVAPH 118
Query: 129 LQNSFSRFYG---------------------NVSNDFDRGKGVIIGKDLARNLGISIGDK 167
L + YG ++ V++ + + +G +
Sbjct: 119 LVSQGILKYGTVEKSGSLIGIDPNLERKASVIDKFIENKRLDVLLADENSIIIGKLLAKD 178
Query: 168 INILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGI 227
+ I V + + V+ F + D VY++L+ Q N V+ +
Sbjct: 179 LGIYETGKKVILTTPNGNTHLFKVVDFFNSGITNLDQTRVYLNLRTLQTMLQRPNEVNEL 238
Query: 228 EVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFS 266
+KD + E+ I + G WQ Y+ F
Sbjct: 239 IFKIKDVNKAERLARLISQE--TGYYTESWQFAYKNFLQ 275
>gi|194336474|ref|YP_002018268.1| protein of unknown function DUF214 [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308951|gb|ACF43651.1| protein of unknown function DUF214 [Pelodictyon phaeoclathratiforme
BU-1]
Length = 416
Score = 81.7 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 49/269 (18%), Positives = 104/269 (38%), Gaps = 8/269 (2%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH- 67
+ +A R+ F+ ++ I+I S IS G++IGV L+VVMSV+NGF++ + I+
Sbjct: 5 LWIAQRFSFARKRFRVINIISAISLAGIVIGVSTLLVVMSVLNGFQKLARDLFITIDSPA 64
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
++ + + + + + I V PF G+A ++ V+ +
Sbjct: 65 QLVPFEGRTMKISENLLQSIRSIEGVGSAEPFAEGEAILATREKSELVVVKGISDAAQRR 124
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD-VTPMGMGIRS 186
++ + + G+ + +L + I I P + +
Sbjct: 125 LMRQTHTLRPFFTPETIAVGELLAFRTNLYPFREVKIFSPELISLGLESLSEPYLIPMLG 184
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN-AVSGIEVFVKDPDAIEKTHENIV 245
T + +D+ V S A+ + + SGI++ K+ + + EN+
Sbjct: 185 IPETSVTSLFSLQKLFDDRYVLTSGLFARKILLMGSEEYSGIDIRGKEGVSGDAFSENLR 244
Query: 246 RI-----LGNGVVVIDWQQRYQIFFSCYE 269
+ L + V ++Y F+ +
Sbjct: 245 KWLAQSPLKTSLRVRTLDEKYSNIFAVMQ 273
>gi|289803303|ref|ZP_06533932.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Typhi str.
AG3]
Length = 132
Score = 81.4 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 52/101 (51%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ S +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L
Sbjct: 1 MASPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQ 103
+ H I+ P +++ ++ +P + P+++
Sbjct: 61 AVVPHGEIEAVNQPWTNWREALAKVQKVPGIAAAAPYINFT 101
>gi|148360504|ref|YP_001251711.1| ABC transporter permease [Legionella pneumophila str. Corby]
gi|148282277|gb|ABQ56365.1| ABC transporter, permease protein [Legionella pneumophila str.
Corby]
Length = 416
Score = 81.4 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 58/296 (19%), Positives = 117/296 (39%), Gaps = 49/296 (16%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M +F + +A ++L + ++ + +S+ G+++GV + + S+M G +D IKR
Sbjct: 1 MKLF----LKIALKHLLARKRQSLVSLM------GIVLGVAFFLTISSLMQGSEKDFIKR 50
Query: 61 VLGINGHVVIQQKYYPLVD----------------------------YQFIANRLDFIPD 92
++ + H+ I +Y Y+ N L
Sbjct: 51 LVDNSPHITIIDEYRNPRIQPIQQLHTHGAIEIRSVKPLTEPRGIRGYEQTINNLSLTIP 110
Query: 93 VIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVII 152
I + P + GQA +S S L I G++ + G+++
Sbjct: 111 GIVISPVLIGQALISYAGKDYSVTLNGMIPEEIKKVSTIENYMTSGSIDDLIVNPDGIVL 170
Query: 153 GKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQ 212
G +L R L ++ D I + +P G + +++ +LG+FR D+D ++S++
Sbjct: 171 GSELLRKLSLTKDDNITVTAPNGQI---------RTFKILGVFRTGRSDFDTNQAFISIK 221
Query: 213 EAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
AQ N N + I + + +P I + +G I WQ++ + +
Sbjct: 222 RAQALLNRPNRSNNIIIKLPNPYQAYDIAAQIEKQIG--YKTISWQEKSEDLLNTL 275
>gi|313203540|ref|YP_004042197.1| hypothetical protein Palpr_1063 [Paludibacter propionicigenes WB4]
gi|312442856|gb|ADQ79212.1| protein of unknown function DUF214 [Paludibacter propionicigenes
WB4]
Length = 413
Score = 81.4 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/272 (13%), Positives = 90/272 (33%), Gaps = 8/272 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
E +A R F K A I+ IG+ +G+ +++ ++V+ GF+ ++ + +G
Sbjct: 1 MSLEYFIAKRIHFQQGKKNVSRPAVRIATIGIALGLAVMLISVAVVIGFKTEIRNKTIGF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
GH+ + + + I + V +
Sbjct: 61 GGHIQVSNFDNNNTFETNPIKVDKALMNKITAIDGVKHVQRFATKPGIIKTDTEFQGVVI 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
++ F N+ + L + +
Sbjct: 121 KGIDKGFNWDFFKSNLVEGNVLDVSGATPGNQVVLSKYLANLLGLKLGDSFYTYFIQEKV 180
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHEN 243
R++ + ++G++ F +YD + +++ Q + +++ SG+E+ V D + I++ +
Sbjct: 181 RARKFKIVGIYSTNFIEYDKLFILADMRQVQALNDWSQDSFSGLEILVNDFNRIDELGDK 240
Query: 244 IV-------RILGNGVVVIDWQQRYQIFFSCY 268
+ GN +Q FS
Sbjct: 241 VYDVTANKFNKEGNAYTTQTIKQLNPQIFSWL 272
>gi|86159830|ref|YP_466615.1| ABC transporter, inner membrane subunit [Anaeromyxobacter
dehalogenans 2CP-C]
gi|85776341|gb|ABC83178.1| ABC transporter, inner membrane subunit [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 405
Score = 81.4 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 51/277 (18%), Positives = 106/277 (38%), Gaps = 21/277 (7%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
FE+ VA R+L R + + G +GV ++ + +++ G + ++++ LG
Sbjct: 1 MPFELFVALRFLREGRAQ------TALVLGGATVGVGVIVFLTALIGGLQATLVEQTLGS 54
Query: 65 NGHVVIQQKYYPLV-----DYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
HVV+++ + +A ++ IP+ + + + + G
Sbjct: 55 QAHVVLRRPERVPRVLPPGPGEALAAVVEKIPERDRSVEQWPEVLALVRGAPGVVSATPT 114
Query: 120 GISNSDFSY--------LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL 171
++ S L+ + V R K + ++ L
Sbjct: 115 AAGSAFASRAGVSRAVALRGVEPESFDRVIPMSRRMKAGAFRAGGEEVVIGAVLADELGL 174
Query: 172 SPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFV 231
+ + RS +TV G+F + D + V +SL+ AQ +L+ ++GIE+ V
Sbjct: 175 AVGDKLRITSAESRSDLFTVAGVFDLGSRDVNQRWVLVSLRAAQTLLDLQGGITGIELKV 234
Query: 232 KDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+DP A E+ ++ G++ W Q Q +
Sbjct: 235 RDPFAAERVARSLAAR--TGLLAESWMQLNQQLLTAL 269
>gi|150008637|ref|YP_001303380.1| putative transmembrane permease [Parabacteroides distasonis ATCC
8503]
gi|256841333|ref|ZP_05546840.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|149937061|gb|ABR43758.1| putative transmembrane permease [Parabacteroides distasonis ATCC
8503]
gi|256737176|gb|EEU50503.1| conserved hypothetical protein [Parabacteroides sp. D13]
Length = 414
Score = 81.0 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 54/280 (19%), Positives = 115/280 (41%), Gaps = 23/280 (8%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASF-ISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
E+ +A + FS + ++ + I+ IG+ +G+ +I+ ++++ GF++++ +V+G
Sbjct: 1 MNLELFIAKKIHFSKEGDREVTPPAVRIAMIGIALGLAVMILSVAIVIGFKKEVRNKVIG 60
Query: 64 INGHVVIQQKYYPLVDYQFIA-------NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
H+ I N LD P + V F + + V
Sbjct: 61 FGSHIQITNFDSNSSYESQPIAVSDTLLNALDAFPGIRHVEKFATKLGILKTDQDFQGIV 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
L ++ D+++ +++ VII K L+ LG+ +GD D
Sbjct: 121 LKGVDTDYDWTFFKDNLKEGEIFTIQPDKNSTDVIISKYLSDLLGLKVGDSFLTYFVQDD 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPD 235
V R++ +T+ G++ F DYD V +++ + + + VSG+E+ V D D
Sbjct: 181 V-------RARKFTITGIYETGFLDYDKMFVIADIKQIRRLNGWDKDQVSGLELQVDDYD 233
Query: 236 AIEKTHENI-------VRILGNGVVVIDWQQRYQIFFSCY 268
+++ E++ GN ++ + F+
Sbjct: 234 RLDQVAEDVYFDLTERQDRNGNTFYARSIKELNPMIFNWL 273
>gi|294638515|ref|ZP_06716704.1| lipoprotein releasing system, transmembrane protein LolC
[Edwardsiella tarda ATCC 23685]
gi|291088413|gb|EFE20974.1| lipoprotein releasing system, transmembrane protein LolC
[Edwardsiella tarda ATCC 23685]
Length = 132
Score = 81.0 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 46/89 (51%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF D+ + +L
Sbjct: 43 MHQPVALFIGLRYMRGRASDRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERDLEQSIL 102
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIP 91
+ ++ L ++ A+ L +P
Sbjct: 103 SLMPQALVTTPQGELDPDRYPASLLKGLP 131
>gi|262383509|ref|ZP_06076645.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|301311445|ref|ZP_07217372.1| putative membrane protein [Bacteroides sp. 20_3]
gi|262294407|gb|EEY82339.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|300830531|gb|EFK61174.1| putative membrane protein [Bacteroides sp. 20_3]
Length = 414
Score = 81.0 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 54/280 (19%), Positives = 115/280 (41%), Gaps = 23/280 (8%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASF-ISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
E+ +A + FS + ++ + I+ IG+ +G+ +I+ ++++ GF++++ +V+G
Sbjct: 1 MNLELFIAKKIHFSKEGDREVTPPAVRIAMIGIALGLAVMILSVAIVIGFKKEVRNKVIG 60
Query: 64 INGHVVIQQKYYPLVDYQFIA-------NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
H+ I N LD P + V F + + V
Sbjct: 61 FGSHIQITNFDSNSSYESQPIAVSDTLLNALDAFPGIRHVEKFATKLGILKTDQDFQGIV 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
L ++ D+++ +++ VII K L+ LG+ +GD D
Sbjct: 121 LKGVDTDYDWTFFKDNLKEGEIFTIQPDKNSTDVIISKYLSDLLGLKVGDSFLTYFVQDD 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPD 235
V R++ +T+ G++ F DYD V +++ + + + VSG+E+ V D D
Sbjct: 181 V-------RARKFTITGIYETGFLDYDKMFVIADIKQIRRLNGWDKDQVSGLELQVDDYD 233
Query: 236 AIEKTHENI-------VRILGNGVVVIDWQQRYQIFFSCY 268
+++ E++ GN ++ + F+
Sbjct: 234 RLDQVAEDVYFDLTERQDRNGNTFYARSIKELNPMIFNWL 273
>gi|32490849|ref|NP_871103.1| hypothetical protein WGLp100 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166055|dbj|BAC24246.1| ycfU [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 401
Score = 81.0 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/267 (17%), Positives = 100/267 (37%), Gaps = 5/267 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ N N + S+ISF+ ++IG +LI++ SV+ GF D+ K +L
Sbjct: 1 MYKPVFLYIGIRYIICNSFNKYNKFTSWISFLSIVIGTSSLILITSVIQGFELDLEKYML 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
HV++ I L+ I + + + + V G++
Sbjct: 61 KFIPHVILYSNDNFYEKKNRIKYELNKNCSEINQVSEFISTNVIIQSNYNLNYGNVFGVN 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
D NS + + G+I+G +LA++L + KI ++ + +
Sbjct: 121 IEDEDQFLNSIGK--KKIEKLLPDQYGIILGYELAKSLNVYKNSKIRMIFIEKNNFTILG 178
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVS-GIEVFVKDPDAIEKTH 241
+ ++ + + D + M+ ++ + +++K P I
Sbjct: 179 PVPTQRVFTVIDIFHTNSEVDQYQILMNKKDLKKIMKNNFEYKYNWRLWLKHPLEIN--K 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
I+ DW++ F+
Sbjct: 237 SCIISCFPGNYNYKDWREDKGDLFNAI 263
>gi|52841086|ref|YP_094885.1| ABC transporter, permease protein [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|54296871|ref|YP_123240.1| hypothetical protein lpp0912 [Legionella pneumophila str. Paris]
gi|52628197|gb|AAU26938.1| ABC transporter, permease protein [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|53750656|emb|CAH12063.1| hypothetical protein lpp0912 [Legionella pneumophila str. Paris]
Length = 416
Score = 81.0 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 58/296 (19%), Positives = 117/296 (39%), Gaps = 49/296 (16%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M +F + +A ++L + ++ + +S+ G+++GV + + S+M G +D IKR
Sbjct: 1 MKLF----LKIALKHLLARKRQSLVSLM------GIVLGVAFFLTISSLMQGSEKDFIKR 50
Query: 61 VLGINGHVVIQQKYYPLVD----------------------------YQFIANRLDFIPD 92
++ + H+ I +Y Y+ N L
Sbjct: 51 LVDNSPHITIIDEYRNPRIQPIQQLHTHGAIEIRSVKPLTEPRGIRGYEQTINNLSLTIP 110
Query: 93 VIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVII 152
I + P + GQA +S S L I G++ + G+++
Sbjct: 111 GIVISPVLIGQALISYAGKDYSVTLNGMIPEEIKKVSTIENYMTSGSIDDLIVNPDGIVL 170
Query: 153 GKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQ 212
G +L R L ++ D I + +P G + +++ +LG+FR D+D ++S++
Sbjct: 171 GSELLRKLSLTKDDNITVTAPNGQI---------RTFKILGVFRTGRSDFDTNQAFISIK 221
Query: 213 EAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
AQ N N + I + + +P I + +G I WQ++ + +
Sbjct: 222 RAQALLNRPNRSNNIIIKLPNPYQAYDIAAQIEKQIG--YKTISWQEKSEDLLNTL 275
>gi|323210655|gb|EFZ95534.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Montevideo
str. 556152]
Length = 110
Score = 81.0 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 45/86 (52%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF ++ +L
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLD 88
G+ ++ ++ L Q ++
Sbjct: 61 GLMPQAILSAEHGSLNPNQMPEKAVN 86
>gi|255012868|ref|ZP_05284994.1| hypothetical protein B2_03114 [Bacteroides sp. 2_1_7]
Length = 384
Score = 81.0 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/246 (16%), Positives = 91/246 (36%), Gaps = 6/246 (2%)
Query: 30 FISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKY-YPLVDYQFIANRLD 88
+S GV++ +AL+ +SV NGF + + + + I + ++
Sbjct: 1 MVSVCGVVVATIALVCALSVYNGFNDLVSSLFSNFDPELKIMPRKGKVFDPTSEEIRKVR 60
Query: 89 FIPDVIKVLPFVSGQAFVSGL-SSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRG 147
+P ++ + A V G + + + + + ++++
Sbjct: 61 ELPGIVCFSEVLQDNALVRYRDRQGVATLKGVDEQYEKLAQIDSILIDGKFLLNDEVANY 120
Query: 148 KGVIIGKDLARNLGISIGDKINILSPYGDVT----PMGMGIRSKSYTVLGMFRMRFPDYD 203
+ IG + + + I +P + + + +FR YD
Sbjct: 121 ANMGIGLAFSLGINAGFVSPLEIYAPKREEKVNMANPASSFNLEYAYIGAVFRTDQQVYD 180
Query: 204 NGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQI 263
+ + + L A+ FN + V+ +E+ VKD I + I RILG+ +V D ++ +
Sbjct: 181 DSYMIVPLSLARSLFNYDKEVTAVELKVKDSGDIAPVKKEIQRILGDQYIVQDRFEQQEA 240
Query: 264 FFSCYE 269
F +
Sbjct: 241 SFKMMQ 246
>gi|296106429|ref|YP_003618129.1| lipoprotein-releasing system permease protein [Legionella
pneumophila 2300/99 Alcoy]
gi|295648330|gb|ADG24177.1| lipoprotein-releasing system permease protein [Legionella
pneumophila 2300/99 Alcoy]
Length = 416
Score = 80.6 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 58/296 (19%), Positives = 117/296 (39%), Gaps = 49/296 (16%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M +F + +A ++L + ++ + +S+ G+++GV + + S+M G +D IKR
Sbjct: 1 MKLF----LKIALKHLLARKRQSLVSLM------GIVLGVAFFLTISSLMQGSEKDFIKR 50
Query: 61 VLGINGHVVIQQKYYPLVD----------------------------YQFIANRLDFIPD 92
++ + H+ I +Y Y+ N L
Sbjct: 51 LVDNSPHITIIDEYRNPRIQPIQQLHTHGAIEIRSVKPLTEPRGIRGYEQTINNLSLTIP 110
Query: 93 VIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVII 152
I + P + GQA +S S L I G++ + G+++
Sbjct: 111 GIVISPVLIGQALISYAGKDYSVSLNGMIPEEIKKVSTIENYMTSGSIDDLIVNPDGIVL 170
Query: 153 GKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQ 212
G +L R L ++ D I + +P G + +++ +LG+FR D+D ++S++
Sbjct: 171 GSELLRKLSLTKDDNITVTAPNGQI---------RTFKILGVFRTGRSDFDTNQAFISIK 221
Query: 213 EAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
AQ N N + I + + +P I + +G I WQ++ + +
Sbjct: 222 RAQALLNRPNRSNNIIIKLPNPYQAYDIAAQIEKQIG--YKTISWQEKSEDLLNTL 275
>gi|78186914|ref|YP_374957.1| hypothetical protein Plut_1052 [Chlorobium luteolum DSM 273]
gi|78166816|gb|ABB23914.1| conserved hypothetical protein [Chlorobium luteolum DSM 273]
Length = 419
Score = 80.6 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/277 (15%), Positives = 89/277 (32%), Gaps = 17/277 (6%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
E +A R+ F R + I+ IG+ +G ALI+ +SV+ GF + +++ + H
Sbjct: 4 EFYIAGRFAFKRRSATRPTFIILIAVIGIAVGTAALILTLSVVKGFASSIEVKLISFSSH 63
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ +Q L + + + D V + SS G+
Sbjct: 64 MQFRQPDSRLF-MERRSEMQQVLNDPETVSGGPFLEKNFILKSSAGARGERGPAGPVMVK 122
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
R + + G ++ + + + + G+ S
Sbjct: 123 GTDEEERRLFLGKFLREGSLNAAQEDGTIGLYAGSTLAENLRLKPGSRVMLAGVSGVSSG 182
Query: 188 SYTVLGMFRMRFPDYDNGMV--------------YMSLQEAQLYFNL--ENAVSGIEVFV 231
+ + + D + G + +M + + + + +SG E V
Sbjct: 183 TEGGGMLELLSSLDLEVGTIRGIYDTGLQEGFDDFMMIADLRAMQDRFSPGMISGYEARV 242
Query: 232 KDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ P+ + T E I L +RYQ F
Sbjct: 243 RHPELLSGTVERIAGELRYPFYGYTVFERYQNLFEWL 279
>gi|239995306|ref|ZP_04715830.1| lipoprotein releasing system transmembrane protein LolE
[Alteromonas macleodii ATCC 27126]
Length = 222
Score = 80.6 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKN--AFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+F +A+RY SN+ + +F+S + S G+ +G+MALI+V+SVMNG + +R
Sbjct: 1 MFYPLSAFIAYRYAKSNKASQTSFVSFINRFSVAGIALGLMALIIVVSVMNGLEGQLKQR 60
Query: 61 VLGINGHVV 69
+LGI H+
Sbjct: 61 ILGIVPHIE 69
>gi|164430472|gb|ABY55553.1| lipoprotein releasing system transmembrane protein [Bartonella
volans]
Length = 167
Score = 80.6 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 59/149 (39%), Positives = 88/149 (59%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
E + A+RY+ N+K+ S+ S IS IG+M+GV +L+VVM+VMNGFR +++ R+LG+NGH
Sbjct: 1 EWMNAFRYMIPNKKHVVASVISIISLIGIMLGVFSLVVVMAVMNGFRTELLNRILGMNGH 60
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+++Q +Y + + L+ I + LP V GQA V G GGSG LVRG+ D
Sbjct: 61 LIVQTVDSGFSNYNALISSLESIEGLKFALPVVEGQALVQGEFQGGSGALVRGMRKQDLE 120
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDL 156
L+ FD+ +G+ IG L
Sbjct: 121 KLKAVSQNIKLGSLAQFDKEEGIAIGSGL 149
>gi|330506706|ref|YP_004383134.1| ABC transporter permease [Methanosaeta concilii GP-6]
gi|328927514|gb|AEB67316.1| ABC transporter permease protein [Methanosaeta concilii GP-6]
Length = 394
Score = 80.6 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 50/273 (18%), Positives = 104/273 (38%), Gaps = 24/273 (8%)
Query: 2 SIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+I S FE+ VA R++ ++ + +S + + V +V + +M+GFR+ + +
Sbjct: 7 NIVSAFELTVAMRHIIYRKRG------TLLSVAAIALAVSISLVSIFMMDGFRDMLFDVI 60
Query: 62 LGINGHVVIQQK--YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
+ HV + K + Y +++R+ IP V+ V + A + V +
Sbjct: 61 IEDLPHVTVTPKEGDDYIYLYHSLSDRIWDIPGVVAVSASLGTSATFT-YKENVENVAMS 119
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
G+ DF + + GK VI+GK L+ L + +G I P
Sbjct: 120 GVDPEDFESIYHLEEYMIKGDLISVQSGKKVILGKKLSERLKVKMGQTIYASFPDARG-- 177
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+ ++ + + +SL+ A+ + N + S +++ + D +
Sbjct: 178 --------TSLMVSGIFDPPVGWPEDLAIVSLETARSFLNEGDVASNVDIRLGDIYQADA 229
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFS--CYES 270
++ G WQ+ Y E+
Sbjct: 230 AARSLQD---YGYKADSWQKLYPEILETLAIET 259
>gi|115525948|ref|YP_782859.1| hypothetical protein RPE_3953 [Rhodopseudomonas palustris BisA53]
gi|115519895|gb|ABJ07879.1| protein of unknown function DUF214 [Rhodopseudomonas palustris
BisA53]
Length = 408
Score = 80.2 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 44/283 (15%), Positives = 88/283 (31%), Gaps = 21/283 (7%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + FE I A R+L + + G+ IGV ++ + +++ G + + IKR
Sbjct: 1 MKRWLPFEWIAAVRFLVDGATQ------TLVIVGGIAIGVGVIVFMSAMLAGLQANFIKR 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
VL + + + ++ +S + + + V
Sbjct: 55 VLTSQPQIQLIPPDQVARPLRREPGTIEAATVQRPTQRVISIDQWPKIRAEMQARPDVVN 114
Query: 121 I-------------SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK 167
S L Y + D L +
Sbjct: 115 AAATASGSALALRGDTSRAVTLYGIEPDIYFRIVRVPDFIIAGEAQVTTEGILIGIELAR 174
Query: 168 INILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGI 227
S + ++ T+ G+F + +++L+ AQ L V+ I
Sbjct: 175 DLGASLGDKIIVSTPLAGNRILTIKGIFDFGNKAANQRNTFVTLRTAQSMLGLIGGVTSI 234
Query: 228 EVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
++ V+D A E + I +L V W + FF+ ++
Sbjct: 235 DLTVEDIYAAETIAQEIQAMLP--VKADSWIRTNAQFFTAVKA 275
>gi|307609641|emb|CBW99146.1| hypothetical protein LPW_09311 [Legionella pneumophila 130b]
Length = 416
Score = 80.2 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 57/296 (19%), Positives = 117/296 (39%), Gaps = 49/296 (16%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M +F + +A ++L + ++ + +S+ G+++GV + + S+M G +D IKR
Sbjct: 1 MKLF----LKIALKHLLARKRQSLVSLM------GIVLGVAFFLTISSLMQGSEKDFIKR 50
Query: 61 VLGINGHVVIQQKYYPLVD----------------------------YQFIANRLDFIPD 92
++ + H+ I +Y Y+ N L
Sbjct: 51 LVDNSPHITIIDEYRNPRIQPIQQLHTHGAIEIRSVKPLTEPRGIRGYEQTINNLSLTIP 110
Query: 93 VIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVII 152
I + P + GQA ++ S L I G++ + G+++
Sbjct: 111 GIVISPVLIGQALINYAGKDYSVTLNGMIPEEIKKVSTIENYMTSGSIDDLIVNPDGIVL 170
Query: 153 GKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQ 212
G +L R L ++ D I + +P G + +++ +LG+FR D+D ++S++
Sbjct: 171 GSELLRKLSLTKDDNITVTAPNGQI---------RTFKILGVFRTGRSDFDTNQAFISIK 221
Query: 213 EAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
AQ N N + I + + +P I + +G I WQ++ + +
Sbjct: 222 RAQALLNRPNRSNNIIIKLPNPYQAYDIAAQIEKQIG--YKTISWQEKSEDLLNTL 275
>gi|255014436|ref|ZP_05286562.1| putative transmembrane permease [Bacteroides sp. 2_1_7]
Length = 414
Score = 80.2 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 55/280 (19%), Positives = 115/280 (41%), Gaps = 23/280 (8%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASF-ISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
E+ +A + FS + ++ + I+ IG+ +G+ +I+ ++++ GF++++ +V+G
Sbjct: 1 MNLELFIAEKIHFSKEGDREVTPPAVRIAMIGIALGLAVMILSVAIVIGFKKEVRNKVIG 60
Query: 64 INGHVVIQQKYYPLVDYQFIA-------NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
H+ I N LD P + V F + + V
Sbjct: 61 FGSHIQITNFDSNSSYESQPIAVSDTLLNALDAFPGIRHVEKFATKLGILKTDQDFQGIV 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
L ++ D+++ +++ VII K L+ LG+ +GD D
Sbjct: 121 LKGVDTDYDWTFFKDNLKEGEIFTIQPDKNSTDVIISKYLSDLLGLKVGDSFLTYFVQDD 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPD 235
V R++ +T+ G++ F DYD V +++ + + + VSG+E+ V D D
Sbjct: 181 V-------RARKFTITGIYETGFLDYDKMFVIADIKQIRRLNGWDKDQVSGLELQVDDYD 233
Query: 236 AIEKTHENI-------VRILGNGVVVIDWQQRYQIFFSCY 268
+++ E+I GN ++ + F+
Sbjct: 234 RLDQVAEDIYFDLTERQDRNGNTFYARSIKELNPMIFNWL 273
>gi|167838490|ref|ZP_02465349.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Burkholderia thailandensis MSMB43]
Length = 112
Score = 80.2 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRK---NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +E + R + ++ N F+S + +S G+ GV ALI+V+SVMNGFR +
Sbjct: 1 MKREYEWQIGLRDTCAGKRATGNGFVSFIAAVSMAGIAPGVAALIIVLSVMNGFRSEGRD 60
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAF 105
R+L + HV I + D+ A+ P V + P+ Q
Sbjct: 61 RMLSVLAHVEIFSPTGTMPDWMRTADESLRNPSVKRAAPYAEAQGC 106
>gi|54293825|ref|YP_126240.1| hypothetical protein lpl0881 [Legionella pneumophila str. Lens]
gi|53753657|emb|CAH15115.1| hypothetical protein lpl0881 [Legionella pneumophila str. Lens]
Length = 416
Score = 80.2 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 57/296 (19%), Positives = 117/296 (39%), Gaps = 49/296 (16%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M +F + +A ++L + ++ + +S+ G+++GV + + S+M G +D IKR
Sbjct: 1 MKLF----LKIALKHLLARKRQSLVSLM------GIVLGVAFFLTISSLMQGAEKDFIKR 50
Query: 61 VLGINGHVVIQQKYYPLVD----------------------------YQFIANRLDFIPD 92
++ + H+ I +Y Y+ N +
Sbjct: 51 LVDNSPHITIIDEYRNPRIQPIQQLHTHGAIEIRSVKPLTEPRGIRGYEQTINNISLTIP 110
Query: 93 VIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVII 152
I + P + GQA +S S L I G++ + G+++
Sbjct: 111 GIVISPVLIGQALISYAGKDYSVTLNGMIPEEIKKVSTIENYMTSGSIDDLIVNPDGIVL 170
Query: 153 GKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQ 212
G +L R L ++ D I + +P G + +++ +LG+FR D+D ++S++
Sbjct: 171 GSELLRKLSLTKDDNITVTAPNGQI---------RTFKILGVFRTGRSDFDTNQAFISIK 221
Query: 213 EAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
AQ N N + I + + +P I + +G I WQ++ + +
Sbjct: 222 RAQALLNRPNRSNNIIIKLPNPYQAYDIASQIEKQIG--YKTISWQEKSEDLLNTL 275
>gi|225012556|ref|ZP_03702992.1| protein of unknown function DUF214 [Flavobacteria bacterium
MS024-2A]
gi|225003533|gb|EEG41507.1| protein of unknown function DUF214 [Flavobacteria bacterium
MS024-2A]
Length = 403
Score = 80.2 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/265 (12%), Positives = 78/265 (29%), Gaps = 3/265 (1%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+ + +A RY FS + I+ + + V++ AL +V+S G ++ + +
Sbjct: 3 YSLKIALRYFFSKSQQTVINRINGFALFMVVVATSALFIVLSAFAGLKDFGLSFTNSFDP 62
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
IQ + + + I + ++ +
Sbjct: 63 DFEIQAIQGKYLTLENNTLSQIEALEQIDAAAPEIEEKVFLSFKEKNQVAYLKAVGPRYI 122
Query: 127 SYLQNSFSRFYGNVSNDFDRGK--GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ ++ G+ + G I L+ + + + +G
Sbjct: 123 NVVEVDQLIALGDWLSFSGSEAVLGFGIAGSLSVGVFDYNTFLNVTVPKKNQKSLLGQDP 182
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHEN 243
+V+ D D V+ +L+ Q LE N S + + K E
Sbjct: 183 FVTMPSVVVGLYQISEDLDKKYVFSNLEFGQKLLELEANQYSSLVIKTKGAVNKEVLLPL 242
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCY 268
+ + ++ ++ +
Sbjct: 243 LSPFFKEPIRLVSRSEQNAALYKML 267
>gi|15616906|ref|NP_240119.1| hypothetical protein BU295 [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219681660|ref|YP_002468046.1| LolCDE ABC lipoprotein transporter (YcfU) [Buchnera aphidicola str.
5A (Acyrthosiphon pisum)]
gi|219682215|ref|YP_002468599.1| LolCDE ABC lipoprotein transporter (YcfU) [Buchnera aphidicola str.
Tuc7 (Acyrthosiphon pisum)]
gi|257471349|ref|ZP_05635348.1| LolCDE ABC lipoprotein transporter (YcfU) [Buchnera aphidicola str.
LSR1 (Acyrthosiphon pisum)]
gi|11133481|sp|P57382|LOLC_BUCAI RecName: Full=Lipoprotein-releasing system transmembrane protein
lolC
gi|25403589|pir||E84964 hypothetical protein [imported] - Buchnera sp. (strain APS)
gi|10038970|dbj|BAB13005.1| hypothetical protein [Buchnera aphidicola str. APS (Acyrthosiphon
pisum)]
gi|219621948|gb|ACL30104.1| LolCDE ABC lipoprotein transporter (YcfU) [Buchnera aphidicola str.
Tuc7 (Acyrthosiphon pisum)]
gi|219624503|gb|ACL30658.1| LolCDE ABC lipoprotein transporter (YcfU) [Buchnera aphidicola str.
5A (Acyrthosiphon pisum)]
gi|311086032|gb|ADP66114.1| LolCDE ABC lipoprotein transporter (YcfU) [Buchnera aphidicola str.
LL01 (Acyrthosiphon pisum)]
gi|311086606|gb|ADP66687.1| LolCDE ABC lipoprotein transporter (YcfU) [Buchnera aphidicola str.
TLW03 (Acyrthosiphon pisum)]
gi|311087189|gb|ADP67269.1| LolCDE ABC lipoprotein transporter (YcfU) [Buchnera aphidicola str.
JF99 (Acyrthosiphon pisum)]
gi|311087716|gb|ADP67795.1| LolCDE ABC lipoprotein transporter (YcfU) [Buchnera aphidicola str.
JF98 (Acyrthosiphon pisum)]
Length = 399
Score = 79.8 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 53/268 (19%), Positives = 108/268 (40%), Gaps = 8/268 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + +A RYL++ F I + +S IG+ I +LI++ S++NG ++ K +L
Sbjct: 1 MYKPISLFIALRYLWNTHLPNFKKIITILSIIGISITTASLIIITSIINGSEKNFEKNIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H++I K + QF N L + + S + I
Sbjct: 61 SFIPHLIITNKNQCIKKDQFPENILKLNNIKN----ISDLISKEIIVQSKNDISMAEVIG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+Y + +IIGK LAR L + IGD++ ++
Sbjct: 117 IDHTNYYNIHNYNIKSVLKTLKPGYYNIIIGKQLARKLNVFIGDRLKLIFLSNTKNFFSG 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
I + + F + D + M+ +++ + N ++ V+G V++K+P ++
Sbjct: 177 EIFKQRTFKIINFFSTKKEVDYYQILMNKEDSLNFLNYSKDYVTGWRVWLKNPLSLN--V 234
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
I +I + + ++DW + F +
Sbjct: 235 NEIKKIT-HPLFLLDWTTQKGELFKAMK 261
>gi|78188888|ref|YP_379226.1| hypothetical protein Cag_0920 [Chlorobium chlorochromatii CaD3]
gi|78171087|gb|ABB28183.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3]
Length = 422
Score = 79.8 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/283 (13%), Positives = 99/283 (34%), Gaps = 18/283 (6%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ +A R+ R ++ + ++ G+ G AL++ ++++NGF + ++++
Sbjct: 1 MKLLWYLATRFALKQRSSSKPTFVVVLAVAGIAAGTAALLLTLAIVNGFAATISQKLVSF 60
Query: 65 NGHVVIQQKYYPLVDYQFIAN-RLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI-- 121
N H+ ++ + +L P++ PF+ + + +S G
Sbjct: 61 NAHLQLRHSSQEFFQEERSERLQLTSHPEITHFTPFLEQRFVLRCRNSAQQGRWSSKAVL 120
Query: 122 -----SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
S ++++ R + G+ +G+ LA L +G K+ ++
Sbjct: 121 VKAMPSAERQNFIKRYSVRGEEKECRVAEGMVGIYLGRSLAEELNCKVGQKVMLIRDSNQ 180
Query: 177 VTPMGMGIRS----------KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSG 226
+ + + V+ + + L + + +SG
Sbjct: 181 ASQRLLADATSLPELLASLAIEPAVVCGIYSTGLQEGFDDYLLLADLSALEQSRKGFISG 240
Query: 227 IEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
E V+ + + T + + + N + QRY F +
Sbjct: 241 YEANVRHIERLPTTVQELTALTNNRLYGYTLFQRYANLFEWIK 283
>gi|58696954|ref|ZP_00372446.1| ABC transporter, permease protein [Wolbachia endosymbiont of
Drosophila simulans]
gi|58536811|gb|EAL60037.1| ABC transporter, permease protein [Wolbachia endosymbiont of
Drosophila simulans]
Length = 364
Score = 79.8 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 61/222 (27%), Positives = 106/222 (47%), Gaps = 5/222 (2%)
Query: 49 VMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSG 108
+MNGFR ++ +LGI+GH+ + DY ++ ++ IP ++K P + Q +
Sbjct: 1 MMNGFRAKLLDSILGIDGHINVYFDRNINSDYYAVSKSIERIPGILKATPMTNDQVIIVA 60
Query: 109 LSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKI 168
V+ + + + G+V +G+IIG LA L + GD+I
Sbjct: 61 NGKIAGSVVRGVSTKDLLDSTAVTNNVIIGDVKK---FDEGIIIGARLAEALNVDYGDEI 117
Query: 169 NILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIE 228
+S +G R K Y V+ +F M +YDN ++YM L+ AQ +FN +N++ IE
Sbjct: 118 TFISSEEFDALLGEMPRMKKYKVIAIFDMGMFEYDNTLIYMPLKSAQAFFNYKNSIKNIE 177
Query: 229 VFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
V V D +K + I + +G + WQ + +FS ++
Sbjct: 178 VLVDDVTRADKLADAIEKEIG--MEAESWQSQQSHYFSALKT 217
>gi|298386468|ref|ZP_06996024.1| membrane protein [Bacteroides sp. 1_1_14]
gi|298260845|gb|EFI03713.1| membrane protein [Bacteroides sp. 1_1_14]
Length = 414
Score = 79.8 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 57/280 (20%), Positives = 105/280 (37%), Gaps = 23/280 (8%)
Query: 5 SRFEVIVAWRYLF-SNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ +A R S+ A I+ G+ IG+ +I+ ++V+ GF+ ++ +V+G
Sbjct: 1 MSLSLFIARRIYRESDGGKQVSRPAVLIAMAGIAIGLAVMIIAVAVVIGFKSEVRNKVIG 60
Query: 64 INGHV-------VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
H+ V + +P+ + L P V V + + + + V
Sbjct: 61 FGSHIQIANLDAVNSYETHPIAVGDSMMTALSGYPQVSHVQRYSTKPGMIKTDDAFQGMV 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
L D S++Q +D V+I K LA + + +GDKI +
Sbjct: 121 LKGVGPEFDPSFMQEYLVEGEIPAFSDSASSNQVLISKALATKMKLKLGDKIYTYYIQDN 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPD 235
+ R++ T+ G+++ F +YDN + L VSG+E+ V+D D
Sbjct: 181 I-------RARRLTIAGIYQTNFSEYDNLFLLTDLYLVNRLNGWEPEQVSGVELQVRDYD 233
Query: 236 AIEKTHENI-------VRILGNGVVVIDWQQRYQIFFSCY 268
+E I G V + +Q F
Sbjct: 234 KLEDITYEIAVDTDSQRDKFGGVYYVRNIEQLNPQIFEWL 273
>gi|253572349|ref|ZP_04849752.1| ABC transporter [Bacteroides sp. 1_1_6]
gi|251838124|gb|EES66212.1| ABC transporter [Bacteroides sp. 1_1_6]
Length = 414
Score = 79.8 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 57/280 (20%), Positives = 105/280 (37%), Gaps = 23/280 (8%)
Query: 5 SRFEVIVAWRYLF-SNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ +A R S+ A I+ G+ IG+ +I+ ++V+ GF+ ++ +V+G
Sbjct: 1 MSLSLFIARRIYRESDGGKQVSRPAVLIAMAGIAIGLAVMIIAVAVVIGFKSEVRNKVIG 60
Query: 64 INGHV-------VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
H+ V + +P+ + L P V V + + + + V
Sbjct: 61 FGSHIQIANLDVVNSYETHPIAVGDSMMTALSGYPQVSHVQRYSTKPGMIKTDDAFQGMV 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
L D S++Q +D V+I K LA + + +GDKI +
Sbjct: 121 LKGVGPEFDPSFMQEYLVEGEIPAFSDSASSNQVLISKALATKMKLKLGDKIYTYYIQDN 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPD 235
+ R++ T+ G+++ F +YDN + L VSG+E+ V+D D
Sbjct: 181 I-------RARRLTIAGIYQTNFSEYDNLFLLTDLYLVNRLNGWEPEQVSGVELQVRDYD 233
Query: 236 AIEKTHENI-------VRILGNGVVVIDWQQRYQIFFSCY 268
+E I G V + +Q F
Sbjct: 234 KLEDITYEIAVDTDSQRDKFGGVYYVRNIEQLNPQIFEWL 273
>gi|301162586|emb|CBW22133.1| putative transmembrane permease [Bacteroides fragilis 638R]
Length = 435
Score = 79.4 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 63/279 (22%), Positives = 109/279 (39%), Gaps = 23/279 (8%)
Query: 6 RFEVIVAWRYLF-SNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
R +A R ++ A I+ IG+ IG+ +I+ +SV+ GF+ ++ +V+G
Sbjct: 23 RLSYFLARRIYRDTDGGKQVSRPAVVIAMIGIAIGLAVMIIAVSVVIGFKSEVRNKVIGF 82
Query: 65 NGHVVIQQKY-------YPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVL 117
H+ I +P+V + L +P+V V + + + + VL
Sbjct: 83 GSHIQISNFDAVGSYETHPVVVNDSMMVALSALPEVKHVQRYSTKPGMIKTDDAFQGMVL 142
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
D ++ ++ +D V+I K +A L + +GDKI DV
Sbjct: 143 KGVGPEFDPTFFRDHLIEGEIPAFSDTASTNQVVISKAIADRLKLKLGDKIYTYFIQKDV 202
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDA 236
R++ TV G+++ F +YDN + L N VSG E+ V+D D
Sbjct: 203 -------RARRLTVKGIYQTNFSEYDNLFLLTDLYLVNRLNNWAPGQVSGAELQVRDYDK 255
Query: 237 IEKTHENI-------VRILGNGVVVIDWQQRYQIFFSCY 268
+E I I G V +Q F+
Sbjct: 256 LEDITYRIATDTDNKQDIYGGTYYVQSIEQMNPQIFAWL 294
>gi|327404010|ref|YP_004344848.1| hypothetical protein Fluta_2024 [Fluviicola taffensis DSM 16823]
gi|327319518|gb|AEA44010.1| protein of unknown function DUF214 [Fluviicola taffensis DSM 16823]
Length = 403
Score = 79.4 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 36/269 (13%), Positives = 98/269 (36%), Gaps = 8/269 (2%)
Query: 5 SRFEVIVAWRYLF-SNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ +A RYL + ++ ++ ++IS +G+ + AL++++S NG + + K
Sbjct: 1 MKIPFFIARRYLRHTRKQRNLVNWITWISVVGIAVITAALVIILSAFNGIEQMVSKLYSD 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ + ++ D + + + + + + G+
Sbjct: 61 YDPAITMRSLEGKTFDSTTVNIESLRKIPGVVSVSKAIEETVIIKHGKKWVNARMIGVDL 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISI-----GDKINILSPYGDVT 178
S + G + + +IG L + I +++ + +P D +
Sbjct: 121 SFVEACKLDKHLVDGYPYLEENGEPTGVIGASLLDKIDGYISELDGHEELMLYTPLRDAS 180
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDY-DNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
+ K + + RM + + + +S+Q AQ+ N E+ ++ I +K + I
Sbjct: 181 IARLKSPFKVSPLKIVGRMNYNKDVNMSDLLVSIQYAQIQLNYEDDITAIYFQIKK-ENI 239
Query: 238 EKTHENIVRILGNGVVVIDWQQRYQIFFS 266
++ + + ++ ++ F
Sbjct: 240 DEVKAILSQKFEKKFQFKTAAEKNELIFK 268
>gi|53712880|ref|YP_098872.1| ABC transporter permease [Bacteroides fragilis YCH46]
gi|52215745|dbj|BAD48338.1| ABC transporter permease protein [Bacteroides fragilis YCH46]
Length = 435
Score = 79.4 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 63/279 (22%), Positives = 109/279 (39%), Gaps = 23/279 (8%)
Query: 6 RFEVIVAWRYLF-SNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
R +A R ++ A I+ IG+ IG+ +I+ +SV+ GF+ ++ +V+G
Sbjct: 23 RLSYFLARRIYRDTDGGKQVSRPAVVIAMIGIAIGLAVMIIAVSVVIGFKSEVRNKVIGF 82
Query: 65 NGHVVIQQKY-------YPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVL 117
H+ I +P+V + L +P+V V + + + + VL
Sbjct: 83 GSHIQISNFDAVGSYETHPVVVNDSMMVALSALPEVKHVQRYSTKPGMIKTDDAFQGMVL 142
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
D ++ ++ +D V+I K +A L + +GDKI DV
Sbjct: 143 KGVGPEFDPAFFRDHLIEGEIPAFSDTASTNQVVISKAIADRLKLKLGDKIYTYFIQKDV 202
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDA 236
R++ TV G+++ F +YDN + L N VSG E+ V+D D
Sbjct: 203 -------RARRLTVKGIYQTNFSEYDNLFLLTDLYLVNRLNNWAPGQVSGAELQVRDYDK 255
Query: 237 IEKTHENI-------VRILGNGVVVIDWQQRYQIFFSCY 268
+E I I G V +Q F+
Sbjct: 256 LEDITYRIATDTDNKQDIYGGTYYVQSIEQMNPQIFAWL 294
>gi|110597554|ref|ZP_01385840.1| Protein of unknown function DUF214 [Chlorobium ferrooxidans DSM
13031]
gi|110340873|gb|EAT59347.1| Protein of unknown function DUF214 [Chlorobium ferrooxidans DSM
13031]
Length = 423
Score = 79.0 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 55/281 (19%), Positives = 110/281 (39%), Gaps = 21/281 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A R+ F R + + ++ IG+ +G ALI+ +S++ GF + ++++ + H+
Sbjct: 5 LYIARRFAFKQRSASRPTFIIMVAVIGIAVGTAALILTLSIVKGFAGSVEQKLISFSAHL 64
Query: 69 VIQQKYYP-LVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLS------SGGSGVLVRGI 121
I+ + + R+ PDV PF+ + G V+V+G+
Sbjct: 65 QIRYPDDRLFQERRQDLLRITQHPDVTSAAPFLEKSFVLRSRRGSTGDTYGSKPVVVKGV 124
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ + F + + G+ LA +LG+++G K+ ++ D T
Sbjct: 125 TPEQRTIFLTRFLKEGSPAMTAESEAIELYAGEPLAEHLGLTVGQKVMLVGLGRDSTGAR 184
Query: 182 MGIRSKSYTV-------------LGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIE 228
+ +KS +D+ +V L++ Q FN +SG +
Sbjct: 185 LITGNKSVVDLLSSLDLEIGVIRGIYDTGLQEGFDDFVVITDLKQMQARFN-PLMISGYD 243
Query: 229 VFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
V+ + + T + IV LG QRY F +
Sbjct: 244 ANVEHFNKLPDTVKEIVATLGLPFYGYTVFQRYSNLFEWLK 284
>gi|15893536|ref|NP_346885.1| permease [Clostridium acetobutylicum ATCC 824]
gi|15023079|gb|AAK78225.1|AE007537_10 Integral membrane protein (permease) [Clostridium acetobutylicum
ATCC 824]
gi|325507655|gb|ADZ19291.1| Integral membrane protein (permease) [Clostridium acetobutylicum EA
2018]
Length = 385
Score = 79.0 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 43/261 (16%), Positives = 99/261 (37%), Gaps = 16/261 (6%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
E +A ++L S++ + I + V + + LI G ++ ++ + +G +
Sbjct: 2 LEFRIASKFLRSSKGQTILIILGIAIGVSVQVFIGTLI------QGLQKSLVDKTIGSSP 55
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
+ + + ++ KV + F + + V
Sbjct: 56 QITVTSEDNDGSIDRWEDKIKSIKNSNSKVENVSASTDFSAFIDKNNKTYPVLIRGFEFA 115
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ + + + + V+IG DL ++ + +GDKI I +P G
Sbjct: 116 NADKIYKIKDNIKIGREPKDENEVLIGIDLKKDASLKVGDKITIFTPKG---------VQ 166
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
K + G++ ++ ++ + +L+ +Q FN + V+ IE+ VKD + +++
Sbjct: 167 KEVKITGVYDLKSSSINDKWILTTLKTSQDMFNYGDKVTAIEMQVKDVFNADVISKDVKS 226
Query: 247 ILG-NGVVVIDWQQRYQIFFS 266
L N V + +W+ S
Sbjct: 227 SLNLNDVKISNWKDSNASLLS 247
>gi|225849167|ref|YP_002729331.1| ABC transporter [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644351|gb|ACN99401.1| ABC-type transport system [Sulfurihydrogenibium azorense Az-Fu1]
Length = 416
Score = 79.0 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 47/282 (16%), Positives = 94/282 (33%), Gaps = 29/282 (10%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ ++ + +F ++ F+SI GV IGV A IV+ S+MNGF++ I++ + +N H+
Sbjct: 5 IFLSLKLMFERKRQTFVSII------GVSIGVAAFIVMASLMNGFQKYFIEQAIDLNAHI 58
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
++ K + + ++ +
Sbjct: 59 TLKVKPDNNPQEIVKLFFGRDTIAKVYGYKPKEEKDKITNYKYIIEKYSPSSDILGIAPH 118
Query: 129 LQNSFSRFYG---------------------NVSNDFDRGKGVIIGKDLARNLGISIGDK 167
L + YG ++ ++ LG +
Sbjct: 119 LTSQVIVRYGTVEKAGNLIGIDPVLERRASVIDKFITNKRLNDLLSDRNGVILGRLLAKD 178
Query: 168 INILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGI 227
+ I V + + V+ F + D VY++L+ AQ N V+ +
Sbjct: 179 LGIDEIGKKVIITTPNGNQQIFKVIDFFESGITNLDQTRVYVNLRTAQSILERPNEVNEL 238
Query: 228 EVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+KD + E+ + I G WQ Y+ F ++
Sbjct: 239 IFKIKDVNMAERLAKKIHNE--TGYYTESWQYAYKNFLQIFK 278
>gi|294507531|ref|YP_003571589.1| Conserved hypothetical protein containing permease domain
[Salinibacter ruber M8]
gi|294343859|emb|CBH24637.1| Conserved hypothetical protein containing permease domain
[Salinibacter ruber M8]
Length = 468
Score = 79.0 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 54/272 (19%), Positives = 111/272 (40%), Gaps = 9/272 (3%)
Query: 6 RFEVIVAWRYLF----SNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
RFE +++RYL+ + +F+ +++ GV +GV AL++ ++++ GF E++ +++
Sbjct: 56 RFERFMSFRYLWGAEGREQGRSFLRFIIYVAVGGVTLGVAALLLALAIVRGFSEEIEEKI 115
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+G H+ + Q + R + V S + V +
Sbjct: 116 VGFGAHIQVSSYVQDEPLDQGASLRRQLHEMKGVSSVSPVVEQPVLLRYSEDAIDGVVLL 175
Query: 122 SNSDFSYLQNSFSRFYGNVSN-DFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
G + + G+++G+++A LG+++GD++ + + M
Sbjct: 176 GMDRLPSYLGKRVEAGGGAVDGEKGGEPGLVVGREMATRLGLAVGDRVTAFALQQGESGM 235
Query: 181 ---GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDA 236
G R + + + G++ D D+ V+ S A+ +L +VS V V DP
Sbjct: 236 SMGGQRPRVEQFRIRGIYDTSLQDIDDVYVFSSTAVARELGSLAAPSVSRFNVTVSDPSR 295
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
I+ I G V Q+Y F+
Sbjct: 296 IDSLAAQIENRFGFPVSARTVYQQYAGLFAWV 327
>gi|60681098|ref|YP_211242.1| putative transmembrane permease [Bacteroides fragilis NCTC 9343]
gi|265762979|ref|ZP_06091547.1| ABC transporter permease [Bacteroides sp. 2_1_16]
gi|60492532|emb|CAH07303.1| putative transmembrane permease [Bacteroides fragilis NCTC 9343]
gi|263255587|gb|EEZ26933.1| ABC transporter permease [Bacteroides sp. 2_1_16]
Length = 414
Score = 79.0 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 63/280 (22%), Positives = 109/280 (38%), Gaps = 23/280 (8%)
Query: 5 SRFEVIVAWRYLF-SNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
R +A R ++ A I+ IG+ IG+ +I+ +SV+ GF+ ++ +V+G
Sbjct: 1 MRLSYFLARRIYRDTDGGKQVSRPAVVIAMIGIAIGLAVMIIAVSVVIGFKSEVRNKVIG 60
Query: 64 INGHVVIQQKY-------YPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
H+ I +P+V + L +P+V V + + + + V
Sbjct: 61 FGSHIQISNFDAVGSYETHPVVVNDSMMVALSALPEVKHVQRYSTKPGMIKTDDAFQGMV 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
L D ++ ++ +D V+I K +A L + +GDKI D
Sbjct: 121 LKGVGPEFDPAFFRDHLIEGEIPAFSDTASTNQVVISKAIADRLKLKLGDKIYTYFIQKD 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPD 235
V R++ TV G+++ F +YDN + L N VSG E+ V+D D
Sbjct: 181 V-------RARRLTVKGIYQTNFSEYDNLFLLTDLYLVNRLNNWAPGQVSGAELQVRDYD 233
Query: 236 AIEKTHENI-------VRILGNGVVVIDWQQRYQIFFSCY 268
+E I I G V +Q F+
Sbjct: 234 KLEDITYRIATDTDNKQDIYGGTYYVQSIEQMNPQIFAWL 273
>gi|253563136|ref|ZP_04840593.1| ABC transporter permease [Bacteroides sp. 3_2_5]
gi|251946912|gb|EES87194.1| ABC transporter permease [Bacteroides sp. 3_2_5]
Length = 414
Score = 79.0 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 63/280 (22%), Positives = 109/280 (38%), Gaps = 23/280 (8%)
Query: 5 SRFEVIVAWRYLF-SNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
R +A R ++ A I+ IG+ IG+ +I+ +SV+ GF+ ++ +V+G
Sbjct: 1 MRLSYFLARRIYRDTDGGKQVSRPAVVIAMIGIAIGLAVMIIAVSVVIGFKSEVRNKVIG 60
Query: 64 INGHVVIQQKY-------YPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
H+ I +P+V + L +P+V V + + + + V
Sbjct: 61 FGSHIQISNFDAVGSYETHPVVVNDSMMVALSALPEVKHVQRYSTKPGMIKTDDAFQGMV 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
L D ++ ++ +D V+I K +A L + +GDKI D
Sbjct: 121 LKGVGPEFDPTFFRDHLIEGEIPAFSDTASTNQVVISKAIADRLKLKLGDKIYTYFIQKD 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPD 235
V R++ TV G+++ F +YDN + L N VSG E+ V+D D
Sbjct: 181 V-------RARRLTVKGIYQTNFSEYDNLFLLTDLYLVNRLNNWAPGQVSGAELQVRDYD 233
Query: 236 AIEKTHENI-------VRILGNGVVVIDWQQRYQIFFSCY 268
+E I I G V +Q F+
Sbjct: 234 KLEDITYRIATDTDNKQDIYGGTYYVQSIEQMNPQIFAWL 273
>gi|315187117|gb|EFU20874.1| protein of unknown function DUF214 [Spirochaeta thermophila DSM
6578]
Length = 432
Score = 78.7 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 43/253 (16%), Positives = 87/253 (34%), Gaps = 14/253 (5%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
L RK AS ++++GV++GV L+ V+SVMNGF+ I ++ + V
Sbjct: 24 LRGRRKKTA--AASLLTWLGVVLGVATLVTVLSVMNGFQSLTIDSLVEVASFHVRVYGAV 81
Query: 76 PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSR 135
+ + + +P V + V + G +R ++
Sbjct: 82 DAAEVERVVGEGVVVPQVEVRVLAGDLGGEVEFVEVRGVPEGMRERDPGFARVVEVREGV 141
Query: 136 FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMF 195
F + +L+ + + + V +F
Sbjct: 142 FRVGEGRVVVGQELA--------YELGVGVGDSLVLTGLSVGETGILVPVRRGFVVSAVF 193
Query: 196 RMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVI 255
R D M++M L++A+L ++ S + V + P ++ +VR G +
Sbjct: 194 RTGNYQIDRSMLFMGLEDARLVAGGDDG-SFLAVKLPRPSRAQEVKRRLVRA---GYEAV 249
Query: 256 DWQQRYQIFFSCY 268
W++ + F
Sbjct: 250 TWEEYNRALFDAL 262
>gi|90425310|ref|YP_533680.1| hypothetical protein RPC_3827 [Rhodopseudomonas palustris BisB18]
gi|90107324|gb|ABD89361.1| protein of unknown function DUF214 [Rhodopseudomonas palustris
BisB18]
Length = 408
Score = 78.7 bits (191), Expect = 9e-13, Method: Composition-based stats.
Identities = 43/281 (15%), Positives = 87/281 (30%), Gaps = 21/281 (7%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + FE I A R+L + + G+ IGV ++ + +++ G + + IKR
Sbjct: 1 MKSWLPFEWIAAVRFLLEGLMQTLVIL------AGIAIGVGVIVFMSAMLAGLQANFIKR 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
VL + + ++ ++ +S + + +
Sbjct: 55 VLTSQPQIQLIPPDQVARPQRYDKGTIEAAIVQRPTQRVLSIDQWSKIRVEMQNRPDIVT 114
Query: 121 I-------------SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK 167
+ + L Y + D L + K
Sbjct: 115 VAPTVSGSGLALRGDTNRAITLTGIEPEVYFQIVRVPDYIVAGGSQITSEGILIGTELAK 174
Query: 168 INILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGI 227
S + ++ T+ G+F + + +++L+ AQ L V+ I
Sbjct: 175 DLGASLGDKINVSTAMGGNRILTINGIFDLGNKGANQRSTFVALRTAQSLLGLIGGVTSI 234
Query: 228 EVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
++ V D A E I +L V W + FF+
Sbjct: 235 DLTVTDIYAAEDIAREIAAMLP--VQADSWIKTNAQFFTAV 273
>gi|307718925|ref|YP_003874457.1| lipoprotein releasing system, permease [Spirochaeta thermophila DSM
6192]
gi|306532650|gb|ADN02184.1| putative lipoprotein releasing system, permease protein
[Spirochaeta thermophila DSM 6192]
Length = 432
Score = 78.7 bits (191), Expect = 9e-13, Method: Composition-based stats.
Identities = 43/253 (16%), Positives = 86/253 (33%), Gaps = 14/253 (5%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
L RK AS ++++GV++GV L+ V+SVMNGF+ I ++ + V
Sbjct: 24 LRGRRKKTA--AASLLTWLGVVLGVATLVTVLSVMNGFQSLTIDSLVEVASFHVRVYGAV 81
Query: 76 PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSR 135
+ + + +P V + V + G +R ++
Sbjct: 82 DAAEVERVVGEGVVVPQVEVRVLAGDLGGEVEFVEVRGVPEGMRERDPGFARVVEVREGV 141
Query: 136 FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMF 195
F + +L+ + + + V +F
Sbjct: 142 FRVGEGRVVVGQELA--------YELGVGVGDSLVLTGLSVGETGILVPVRRGFVVSAVF 193
Query: 196 RMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVI 255
R D M++M L +A+L ++ S + V + P ++ +VR G +
Sbjct: 194 RTGNYQIDRSMLFMGLDDARLIAGGDDG-SFLAVKLPRPSRAQEVKRRLVRA---GYGAV 249
Query: 256 DWQQRYQIFFSCY 268
W++ + F
Sbjct: 250 TWEEYNRALFDAL 262
>gi|237757238|ref|ZP_04585645.1| lipoprotein releasing system transmembrane protein LolC
[Sulfurihydrogenibium yellowstonense SS-5]
gi|237690603|gb|EEP59804.1| lipoprotein releasing system transmembrane protein LolC
[Sulfurihydrogenibium yellowstonense SS-5]
Length = 328
Score = 78.7 bits (191), Expect = 9e-13, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 66/121 (54%)
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+I+GKD+A L + +GD INI+SP G TP+G + K + V G+ +YD+ V
Sbjct: 68 NIILGKDVALALNVWVGDSINIMSPVGRKTPLGFLPKLKEFKVAGIVEFGIYEYDSTFVC 127
Query: 209 MSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
MSL+ AQ +F+L A++GI++ +KDP E + + L +V W + F
Sbjct: 128 MSLENAQSFFDLNGAITGIQLKIKDPFNPSIVKEKLEKRLDFPYIVRSWTDMNKSLFQAL 187
Query: 269 E 269
+
Sbjct: 188 Q 188
>gi|146282861|ref|YP_001173014.1| lipoprotein release ABC transporter permease [Pseudomonas stutzeri
A1501]
gi|145571066|gb|ABP80172.1| predicted ABC-type transport system, involved in lipoprotein
release, permease component [Pseudomonas stutzeri A1501]
Length = 406
Score = 78.7 bits (191), Expect = 9e-13, Method: Composition-based stats.
Identities = 40/283 (14%), Positives = 87/283 (30%), Gaps = 23/283 (8%)
Query: 1 MSIFSRF--EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMI 58
M + E +A R+L NR + + G+ +G ++ + +++ G + ++I
Sbjct: 1 MRLADSLWTEWKIALRFLLDNRMQ------TLLITFGIAVGSAVIVFITALITGLQANVI 54
Query: 59 KRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
+R LG H+ I A+ + + + S + V +
Sbjct: 55 QRTLGTQAHIRILPPDEVNRTLPAAADSWSLVLESPRAQRLRSIINWQDVRDVLDQDVQI 114
Query: 119 RGISNSDFSY-------------LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIG 165
+S L Y + D +
Sbjct: 115 LAVSPVISGPAIARRGVARASVALLGIDPPRYQRIIPLADDLIAGRFLVGAGNAVIGKEL 174
Query: 166 DKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVS 225
+ L + R + G+F + + D VY+ L++AQ +L V+
Sbjct: 175 ARDLGLGIGDKLRLDAGEGREAVVDIAGIFELGVRELDARYVYLDLKQAQTLLDLPGGVT 234
Query: 226 GIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
I+ V + ++ + R+ G+ W + +
Sbjct: 235 VIDTTVAEIFQADEVARRLARL--TGLRAESWMETNGQLLNAL 275
>gi|91975949|ref|YP_568608.1| hypothetical protein RPD_1470 [Rhodopseudomonas palustris BisB5]
gi|91682405|gb|ABE38707.1| protein of unknown function DUF214 [Rhodopseudomonas palustris
BisB5]
Length = 404
Score = 78.7 bits (191), Expect = 9e-13, Method: Composition-based stats.
Identities = 42/279 (15%), Positives = 85/279 (30%), Gaps = 21/279 (7%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
FE I A R+L ++ + + G+ IGV ++ + +++ G + + IKRVL
Sbjct: 1 MPFEWIAAVRFLLDG------ALQTLVIVGGIAIGVGVIVFMSAMLAGLQANFIKRVLTS 54
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI--- 121
+ + + ++ +S + + + V
Sbjct: 55 QPQIQLIPPDQVARPLRDEPGTVEVATVQRPTQRVISIDQWPKIRAEMQARPDVVYAAAT 114
Query: 122 ----------SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL 171
S L Y + D L +
Sbjct: 115 ASGSALALRGDTSRAITLYGIEPEIYFQIVKVPDFIVAGEAQITTEGILIGVELARDLGA 174
Query: 172 SPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFV 231
S + ++ T+ G+F + +++L+ AQ L V+ I++ V
Sbjct: 175 SLGDKIIVSTPLAGNRVLTIKGIFDFGNKAANQRNTFVTLRNAQSMLGLIGGVTSIDITV 234
Query: 232 KDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
D E + I L V W + FF+ ++
Sbjct: 235 ADIYTAETIAQEIQATLP--VKADSWIRTNAQFFTAVKA 271
>gi|42522999|ref|NP_968379.1| lipoprotein releasing system transmembrane protein [Bdellovibrio
bacteriovorus HD100]
gi|39575204|emb|CAE79372.1| Lipoprotein releasing system transmembrane protein [Bdellovibrio
bacteriovorus HD100]
Length = 405
Score = 78.3 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 50/262 (19%), Positives = 109/262 (41%), Gaps = 5/262 (1%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
++WR LFS + ++ ++ +G+++GV AL+ M+VM+GF + + ++GH
Sbjct: 3 WLSWRLLFSRK--TMFGGSAPLALLGLVLGVAALVASMAVMSGFENTLKTAMAEVSGHAQ 60
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ ++ D++ + R+ + V SGVL++G+ + +
Sbjct: 61 VVKRSRFPDDWKELEERIRKAEPTLVNTSRFVFIEAVLANKGQISGVLIQGVDTQRVNEV 120
Query: 130 QNSFSRFYGNVSNDFD--RGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
N R + ++GK+LA+ + +++GD ++ P D R
Sbjct: 121 LNFKRRVLSGTDDLNVASDVPLALVGKNLAKKMNLNVGDTFRVVVPVADSVDPSKFQRRV 180
Query: 188 SYTVLGMF-RMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ + D++ + L+ Q ++ + SG+ + +D D N+
Sbjct: 181 GAFKVQGILDLGKHDWNERFILSDLKATQDLADIGDRYSGLLLKFQDVDHARDAAFNLSA 240
Query: 247 ILGNGVVVIDWQQRYQIFFSCY 268
+LG+ V DW+ + F
Sbjct: 241 VLGSPYWVRDWRDANENLFEAI 262
>gi|327481199|gb|AEA84509.1| lipoprotein release ABC transporter permease [Pseudomonas stutzeri
DSM 4166]
Length = 406
Score = 78.3 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/283 (13%), Positives = 86/283 (30%), Gaps = 23/283 (8%)
Query: 1 MSIFSRF--EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMI 58
M + E +A R+L NR + + G+ +G ++ + +++ G + ++I
Sbjct: 1 MRLADSLWTEWKIALRFLLDNRMQ------TLLITFGIAVGSAVIVFITALITGLQANVI 54
Query: 59 KRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
+R LG H+ I A+ + + + S + +
Sbjct: 55 QRTLGTQAHIRILPPDEVNRTLPAAADSWSLVLESPRAQRLRSIINWQDVRDVLDQDAQI 114
Query: 119 RGISNSDFSY-------------LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIG 165
+S L Y + D +
Sbjct: 115 LAVSPVISGPAIARRGVARASVALLGIDPPRYQRIIPLADDLIAGRFLVGAGNAVIGKEL 174
Query: 166 DKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVS 225
+ L + R + G+F + + D VY+ L++AQ +L V+
Sbjct: 175 ARDLGLGIGDKLRLDAGEGREAVVDIAGIFELGVRELDARYVYLDLKQAQTLLDLPGGVT 234
Query: 226 GIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
I+ V + ++ + R+ G+ W + +
Sbjct: 235 VIDTTVAEIFQADEVARRLARL--TGLRAESWMETNGQLLNAL 275
>gi|307298051|ref|ZP_07577855.1| protein of unknown function DUF214 [Thermotogales bacterium
mesG1.Ag.4.2]
gi|306916137|gb|EFN46520.1| protein of unknown function DUF214 [Thermotogales bacterium
mesG1.Ag.4.2]
Length = 388
Score = 78.3 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 49/265 (18%), Positives = 107/265 (40%), Gaps = 18/265 (6%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ +A R+L S++ + + + +G+ IGV + + S++ G ++D++ +G
Sbjct: 1 MKLAFSIAMRFLSSSK------VQTLLIVLGIAIGVSVQVFIGSLIQGLQKDLVDTTIGS 54
Query: 65 NGHVVIQQKYYPLV--DYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ V I D++ I + +D + ++ + + SG + V
Sbjct: 55 SSQVTITSSEEDNRVADWESIISEIDSLDLPTELTALSASADLPVFIDSGNRTLSVLLRG 114
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++IGK L +L + IG+KI I +P V
Sbjct: 115 LQFPESNAIYKIDTRLVDGKIPENYREILIGKGLKEDLEVKIGEKITIFTPDRTV----- 169
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
++ V+G+F + + + ++ AQ +L +AV+ IE+ V + ++
Sbjct: 170 ----ETLEVVGIFDLGVASLNRNWLISTIDTAQSVGDLGDAVTSIEMQVSEVFRADENAS 225
Query: 243 NIVRIL-GNGVVVIDWQQRYQIFFS 266
I L + V DW+ + + S
Sbjct: 226 LISEALRNPSLQVTDWKSQNEDLLS 250
>gi|695785|emb|CAA58844.1| orf4 [Zymomonas mobilis]
Length = 203
Score = 78.3 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 44/64 (68%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
I S +E I+A RYL + AFI + + IS + V +GV ALI+VMSVMNGFR ++ +++
Sbjct: 2 ILSAYERIIARRYLLPGKGEAFIFLVASISLLAVTLGVAALIIVMSVMNGFRAELFDKIV 61
Query: 63 GING 66
GIN
Sbjct: 62 GINH 65
>gi|332169400|gb|AEE18655.1| protein of unknown function DUF214 [Krokinobacter diaphorus
4H-3-7-5]
Length = 401
Score = 78.3 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/270 (12%), Positives = 86/270 (31%), Gaps = 4/270 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+F +A RYL S ++I + +S + +++G + L +V+S +G +E + I
Sbjct: 1 MQFPYYIAKRYLISKSGTNAVNIITLVSVVSIILGTLVLFIVLSAFSGLKEFNLSITSII 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + I + + + V + S ++G+
Sbjct: 61 DPDLKIAPASGKTITLSPDQEQQLNSLKGVASYSKVIEERAYLEYDGRTSLAFLKGVDER 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGD---KINILSPYGDVTPMG 181
Q + F G + + + + ++ + I P
Sbjct: 121 YLDVTQMDSTIFVGYWPSPGEPEVAMGLLVRKRLSINVGDYGSLVTIMTPKPGTGQITDP 180
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKT 240
+ S ++ DN V+ ++ + N +S IE + +
Sbjct: 181 TQAFNSSKAMVSGVFQAGDALDNDHVFGNIDFVGSLLDYPANQISTIEFKLDSDADEDNL 240
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYES 270
E + I N +++ + + + +
Sbjct: 241 REELNAIFNNNIIIKNRIELNDALYKMLNT 270
>gi|167041980|gb|ABZ06717.1| hypothetical protein ALOHA_HF4000141E02ctg1g19 [uncultured marine
microorganism HF4000_141E02]
Length = 164
Score = 78.3 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 63/92 (68%), Gaps = 1/92 (1%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A+R LFS +++ FISI +FIS + + +GV +LIVV+SVMNGF+ ++ +RV+ ++ H
Sbjct: 5 LFIAYRQLFSKQQSQFISIVTFISILAIALGVSSLIVVLSVMNGFQAEIEERVIRLSSH- 63
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFV 100
+ Q P+ +Q I N L+ P++ +PFV
Sbjct: 64 ITIQSDQPIRRWQSIVNELEQFPEIKHTIPFV 95
>gi|189466959|ref|ZP_03015744.1| hypothetical protein BACINT_03341 [Bacteroides intestinalis DSM
17393]
gi|189435223|gb|EDV04208.1| hypothetical protein BACINT_03341 [Bacteroides intestinalis DSM
17393]
Length = 414
Score = 78.3 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 63/280 (22%), Positives = 108/280 (38%), Gaps = 23/280 (8%)
Query: 5 SRFEVIVAWRYLF-SNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ +A R + A I+ IGV IG+ +I+ +SV+ GF+ ++ +V+G
Sbjct: 1 MSLPLFLARRIYRDRDAGKQVSRPAVLIALIGVAIGLAVMIITVSVIVGFKSEVRGKVIG 60
Query: 64 I-------NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
N + P+V + + L P+V V + + V V
Sbjct: 61 FGSDIQITNSDAARSYETRPVVVNDSVISILSEYPEVKHVQRYSTKPGMVKTADDFQGMV 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
L D ++ + +D V+I K LA L + +GDKI+ D
Sbjct: 121 LKGVGPEFDPAFFREHLVEGELPQFSDTVSSNRVVISKALATKLRLKLGDKIDTYYIQDD 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPD 235
+ R++ V+G+++ F +YDN + L N VSG E+ V+D D
Sbjct: 181 I-------RARRLQVVGIYQTNFSEYDNLFLLTDLYLVNRLNNWEPGQVSGAELQVRDYD 233
Query: 236 AIEKTHENIVRIL-------GNGVVVIDWQQRYQIFFSCY 268
+E+T I L G V + ++ FS
Sbjct: 234 RLEETTYQIAADLNGIEDKYGEDYCVRNVEELNPQIFSWL 273
>gi|255036592|ref|YP_003087213.1| hypothetical protein Dfer_2833 [Dyadobacter fermentans DSM 18053]
gi|254949348|gb|ACT94048.1| protein of unknown function DUF214 [Dyadobacter fermentans DSM
18053]
Length = 422
Score = 77.9 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/271 (14%), Positives = 89/271 (32%), Gaps = 11/271 (4%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
+F +A R + N +F + S I + I V I+ +V+ GF++ + +++
Sbjct: 13 QFPSFIAKR-IRHNEAGSFSATVSRIGVASIAISVAVGIIAFAVLLGFKQTIQQKIFLFG 71
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV------- 118
H+ + + + + D++ LP V V+ S
Sbjct: 72 AHINVNAFSQGNTYEEGPLPLKNPVSDILPALPEVKRWQAVAHKSGILKTPEEIKGVILK 131
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
+ D+ + + +D K + L S
Sbjct: 132 GVGKDYDWDTFKQNLVEGKLITRSDSSSIKYGYSSQILISRKIASQMRLKTGDDVIM--Y 189
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAI 237
+ R + T+ G++ ++DN ++ + Q ++V E+++KD +
Sbjct: 190 SLQNPPRPRKLTIAGIYETEMEEFDNNLILGDIGLVQRLNGWGADSVGTYEIYLKDFRDL 249
Query: 238 EKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + R L G+ + + F
Sbjct: 250 DAVTGKLRRELPPGLYLQKVTSLFPQIFDWL 280
>gi|262369027|ref|ZP_06062356.1| lipoprotein release ABC transporter permease [Acinetobacter
johnsonii SH046]
gi|262316705|gb|EEY97743.1| lipoprotein release ABC transporter permease [Acinetobacter
johnsonii SH046]
Length = 407
Score = 77.9 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/284 (14%), Positives = 92/284 (32%), Gaps = 24/284 (8%)
Query: 1 MS-IFSRF--EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDM 57
M F R E +A +L R S + IG+ +GV ++ + +++ G + ++
Sbjct: 1 MKNFFGRLWTEWTIAISFLREGRTQ------SMMITIGIAVGVAVIVFISALIQGLQSNI 54
Query: 58 IKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVL 117
++R LG H+ + A L + + + S + + +
Sbjct: 55 VERTLGTQAHIRLLSPDEVNHIVPPAAGTLQLLQEDQRAQRLRSINNWQQITETLDQLPV 114
Query: 118 VRGISN-------------SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISI 164
+ +S L Y + + L
Sbjct: 115 LTAVSPVVSGPAFVQRGEAIQSVALVGINLERYRQIIPLKQYMVSGELRVSADNVLIGRQ 174
Query: 165 GDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAV 224
K + + ++ + G+F + + D VY+ L++AQ NL V
Sbjct: 175 LAKDLGVQVGSKLRLDTGQQKNAVVNISGIFELGVRELDARYVYLDLKQAQSLLNLPGGV 234
Query: 225 SGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ I++ ++D ++ + R+ G+ W + +
Sbjct: 235 TVIDLTIQDIFQADQIASQVGRL--TGLKAESWIETNAQLMNAI 276
>gi|224024551|ref|ZP_03642917.1| hypothetical protein BACCOPRO_01277 [Bacteroides coprophilus DSM
18228]
gi|224017773|gb|EEF75785.1| hypothetical protein BACCOPRO_01277 [Bacteroides coprophilus DSM
18228]
Length = 415
Score = 77.9 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 55/281 (19%), Positives = 112/281 (39%), Gaps = 23/281 (8%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASF-ISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +++ +A R SN +S + I+ G+ +G+ +IV +SV+ GF+ + +V+
Sbjct: 1 MANWKLFIARRIYRSNDGKKEVSKPAMRIAISGIAVGLAVMIVSVSVVLGFKHQVRDKVV 60
Query: 63 GINGHVV-------IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSG 115
G+ ++ + P+V + + L +P V V + + + +
Sbjct: 61 GLGSDIILSGIEGTQLYQMSPVVCGDSLMHVLKDVPLVSHVQRYSTKPGMIMTSDNFQGM 120
Query: 116 VLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYG 175
VL D S+LQ +D ++ + +A L + +GDK+ G
Sbjct: 121 VLKGIAGEYDVSFLQEHLQEGEIPSFSDSVASNQALVSRTIADKLSLKVGDKLFTYYVEG 180
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDP 234
+V R++ V G++ YD+ + L N V G+E+ V D
Sbjct: 181 NV-------RARRLEVAGIYCTNLSAYDDFFLITDLYTVNRLNNWEPEQVGGVEIEVSDY 233
Query: 235 DAIEKTHENIVRILGN-------GVVVIDWQQRYQIFFSCY 268
+ + +E+++ +LGN G ++ Y F
Sbjct: 234 SRLNEVNESVLALLGNHKDRYGQGYFSRTVEEAYPQIFDWL 274
>gi|153808101|ref|ZP_01960769.1| hypothetical protein BACCAC_02387 [Bacteroides caccae ATCC 43185]
gi|149129004|gb|EDM20220.1| hypothetical protein BACCAC_02387 [Bacteroides caccae ATCC 43185]
Length = 414
Score = 77.9 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 58/280 (20%), Positives = 108/280 (38%), Gaps = 23/280 (8%)
Query: 5 SRFEVIVAWRYLF-SNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ +A R S+ A I+ G+ IG+ +I+ ++V+ GF+ ++ +V+G
Sbjct: 1 MSLSLFIARRIYRESDGGKQVSRPAVLIAMAGIAIGLAVMIIAVAVVIGFKSEVRNKVIG 60
Query: 64 INGHV-------VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
H+ V + +P+V + L P+V V + + + + V
Sbjct: 61 FGSHIQITNLDAVNSYETHPIVAGDSLIAALSDYPEVSHVQRYSTKPGMIKTDDAFQGMV 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
L D +++ V +D V+I K LA + + +GDKI +
Sbjct: 121 LKGVGPEFDSRFMKEYLVEGEIPVFSDSVSSNQVLISKALATKMKLKLGDKIYTYYIQDE 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPD 235
V R++ T+ G+++ F +YDN + L + VSG+E+ V+D D
Sbjct: 181 V-------RARRLTIAGIYQTNFSEYDNLFLLTDLNLVNRLNGWQREQVSGVELQVRDYD 233
Query: 236 AIEKTHENI-------VRILGNGVVVIDWQQRYQIFFSCY 268
+E I G V + +Q F
Sbjct: 234 KLEDVTYEIAIDTDSQRDKFGGIYYVRNIEQLNPQIFEWL 273
>gi|288819019|ref|YP_003433367.1| ABC transporter permease protein [Hydrogenobacter thermophilus
TK-6]
gi|288788419|dbj|BAI70166.1| ABC transporter permease protein [Hydrogenobacter thermophilus
TK-6]
gi|308752604|gb|ADO46087.1| protein of unknown function DUF214 [Hydrogenobacter thermophilus
TK-6]
Length = 414
Score = 77.9 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 53/286 (18%), Positives = 98/286 (34%), Gaps = 31/286 (10%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ + +A++ L ++ + +S GV IGV ALIV+ S+M GF+ I++V+ +
Sbjct: 1 MNYIIFIAYKLLLERKRQ------TLVSVSGVAIGVGALIVMSSLMFGFQNYFIQQVIDL 54
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H+ K D + I + + + G + R
Sbjct: 55 EAHI--SIKPKEYADEERIVKMVQPNALWKVYSSKPKEEDKIIGWREILRDIEKREDVVG 112
Query: 125 DFSYLQNSFSRFYG--------NVSNDFDRGKGVIIGKDLARNLGISIGDKIN------- 169
+L YG + K +I + L S+ +
Sbjct: 113 VAPHLVVRGILKYGTKEKPVTLIGIDPDMEPKASVIQRFLEYKRLESLKTNKDAVILGKL 172
Query: 170 ------ILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA 223
I V + ++ V F + DN VYM ++ Q + +
Sbjct: 173 VAKDLGIRETGRKVILVLPNGQTYLLKVEDFFNSGITNIDNTRVYMHIRTLQALMDRVDE 232
Query: 224 VSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
V+ I + VKD + +K + + L V WQ+ Y F ++
Sbjct: 233 VNEIVIKVKDVNQAQKIALELQKSL--KYDVESWQRAYINFLQIFK 276
>gi|212691478|ref|ZP_03299606.1| hypothetical protein BACDOR_00970 [Bacteroides dorei DSM 17855]
gi|237712081|ref|ZP_04542562.1| ABC transporter permease [Bacteroides sp. 9_1_42FAA]
gi|265751783|ref|ZP_06087576.1| ABC transporter permease [Bacteroides sp. 3_1_33FAA]
gi|212665958|gb|EEB26530.1| hypothetical protein BACDOR_00970 [Bacteroides dorei DSM 17855]
gi|229453402|gb|EEO59123.1| ABC transporter permease [Bacteroides sp. 9_1_42FAA]
gi|263236575|gb|EEZ22045.1| ABC transporter permease [Bacteroides sp. 3_1_33FAA]
Length = 414
Score = 77.9 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 55/278 (19%), Positives = 108/278 (38%), Gaps = 23/278 (8%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASF-ISFIGVMIGVMALIVVMSVMNGFREDMIKR----- 60
+++ +A R SN +S + I+ +G+ IG+ +IV ++V+ GF+ ++ +
Sbjct: 3 WKLFIARRIYRSNEGGKEVSKPAVRIAMLGIAIGLAVMIVSVAVVIGFKHEVRDKVVGLG 62
Query: 61 --VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
++ N + P+V + + L + V V + + + S VL
Sbjct: 63 ADIVITNFDSQQSYQTVPIVANDSLLHLLKTLEGVKHVQRYSTKPGMIMTSDSFQGMVLK 122
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
D+ +L+N V +D V++ + +A L + +GDKI +V
Sbjct: 123 GVSHEYDWRFLKNHLQEGEIPVFSDTASTNKVLVSRTIADRLHLKLGDKIYTYYIEDNV- 181
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLY-FNLENAVSGIEVFVKDPDAI 237
R++ TV G+++ F YD+ + L + VSGIE+ V + +
Sbjct: 182 ------RARRLTVAGIYQTNFSAYDDLFLITDLYTVNRLNSWQKGQVSGIELEVNEYSRL 235
Query: 238 EKTHENIV-------RILGNGVVVIDWQQRYQIFFSCY 268
E E I G ++ F+
Sbjct: 236 ESVKEEIRARVDTQVDAYGGTYYTQSVEEVNPQIFAWL 273
>gi|329903139|ref|ZP_08273379.1| Putative ABC transporter, permease protein; putative
lipoprotein-releasing system transmembrane protein lolC
[Oxalobacteraceae bacterium IMCC9480]
gi|327548473|gb|EGF33144.1| Putative ABC transporter, permease protein; putative
lipoprotein-releasing system transmembrane protein lolC
[Oxalobacteraceae bacterium IMCC9480]
Length = 409
Score = 77.5 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 50/279 (17%), Positives = 90/279 (32%), Gaps = 22/279 (7%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M+ FE I A R+L R S +G IGV ++ + ++++G + ++ +R
Sbjct: 1 MNDLLPFEWIAAVRFLREGRLQ------SIFIIVGAAIGVAVIVFMSALLDGLQANLFQR 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS------ 114
VL H+V+Q+ + A + K +S + +
Sbjct: 55 VLSSQPHIVLQRPQQVAQPQRSDAAGTQVLMAQQKPSQRISSIDQWQKVRDEMALRADVL 114
Query: 115 --------GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGD 166
V S L Y + D+ L
Sbjct: 115 AVSPSVTGPAFVLRGDASQSVSLVGIDPENYIKIVPLPDKITAGTYRMTNTDMLIGIQLA 174
Query: 167 KINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSG 226
+ + + + TV G+F + + VY+ L AQ L VS
Sbjct: 175 EDMGVQVGDKLRVTSANGGNLILTVAGLFDLGNRAVNQRNVYVLLSTAQNLTGLVGGVST 234
Query: 227 IEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFF 265
I++ V+ P E+ ++I G+ + W FF
Sbjct: 235 IDLTVQVPFDAERVAQSIAG--DTGLQALSWIATNNQFF 271
>gi|237726237|ref|ZP_04556718.1| ABC transporter permease [Bacteroides sp. D4]
gi|229434763|gb|EEO44840.1| ABC transporter permease [Bacteroides dorei 5_1_36/D4]
Length = 414
Score = 77.5 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 55/278 (19%), Positives = 108/278 (38%), Gaps = 23/278 (8%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASF-ISFIGVMIGVMALIVVMSVMNGFREDMIKR----- 60
+++ +A R SN +S + I+ +G+ IG+ +IV ++V+ GF+ ++ +
Sbjct: 3 WKLFIARRIYRSNEGGKEVSKPAVRIAMLGIAIGLAVMIVSVAVVIGFKHEVRDKVVGLG 62
Query: 61 --VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
++ N + P+V + + L + V V + + + S VL
Sbjct: 63 TDIVITNFDSQQSYQTVPIVANDSLLHLLKTLEGVKHVQRYSTKPGMIMTSDSFQGMVLK 122
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
D+ +L+N V +D V++ + +A L + +GDKI +V
Sbjct: 123 GVSHEYDWRFLKNHLQEGEIPVFSDTASTNKVLVSRTIADRLHLKLGDKIYTYYIEDNV- 181
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLY-FNLENAVSGIEVFVKDPDAI 237
R++ TV G+++ F YD+ + L + VSGIE+ V + +
Sbjct: 182 ------RARRLTVAGIYQTNFSAYDDLFLITDLYTVNRLNSWQKGQVSGIELEVNEYSRL 235
Query: 238 EKTHENIV-------RILGNGVVVIDWQQRYQIFFSCY 268
E E I G ++ F+
Sbjct: 236 ESVKEEIRARVDTQVDAYGGTYYTQSVEEVNPQIFAWL 273
>gi|39934719|ref|NP_946995.1| hypothetical protein RPA1649 [Rhodopseudomonas palustris CGA009]
gi|39648569|emb|CAE27090.1| predicted ABC-type transport systems, involved in lipoprotein
release, permease components [Rhodopseudomonas palustris
CGA009]
Length = 408
Score = 77.5 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/283 (15%), Positives = 90/283 (31%), Gaps = 21/283 (7%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + FE I A R+L ++ + + G+ IGV ++ + +++ G + + IKR
Sbjct: 1 MKRWLPFEWIAAVRFLLDG------AVQTLVIVGGIAIGVGVIVFMSAMLAGLQANFIKR 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
VL + + + ++ +S + + + V
Sbjct: 55 VLTSVPQIQLLPPDQVARPLRDQPGTVEAAVVQRPTQRMISIDQWPKIRAEMQARPDVVY 114
Query: 121 I-------------SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK 167
S L Y + D L +
Sbjct: 115 AAATASGSALALRGDTSRAVTLYGIEPEIYFKIVKVPDFIVAGEAQVTTEGILIGIELAR 174
Query: 168 INILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGI 227
S + ++ T+ G+F + +++L+ AQ L V+ I
Sbjct: 175 DLGASLGDKIIVSTPLAGNRILTIKGIFDFGNKAANQRNTFVTLRNAQSMLGLIGGVTSI 234
Query: 228 EVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
++ V+D A E + I +L V W + FF+ ++
Sbjct: 235 DLTVEDIYAAETIAQEIQAML--QVKADSWIKTNAQFFTAVQA 275
>gi|325855518|ref|ZP_08171855.1| efflux ABC transporter, permease protein [Prevotella denticola CRIS
18C-A]
gi|325483801|gb|EGC86760.1| efflux ABC transporter, permease protein [Prevotella denticola CRIS
18C-A]
Length = 415
Score = 77.5 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/274 (16%), Positives = 95/274 (34%), Gaps = 10/274 (3%)
Query: 5 SRFEVIVAWR-YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ + +A + Y ++ A I+ +GV IG+ +IV + V+ GF+ + +V+G
Sbjct: 1 MNYPLFIARKIYNGGDKTRKVSKPAIRIATVGVAIGLAVMIVSVCVVLGFKHTIRDKVVG 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSG-QAFVSGLSSGGSGVLVRGIS 122
H+ + Q+ D + V+K +P V Q +V + GI
Sbjct: 61 FGSHITVADFLTLQSSEQYPIQVSDSLIKVLKAVPGVRHVQRYVYTQGILKTDNDFLGIV 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+S + V + L + I+ +
Sbjct: 121 LKGVGPDFDSTFIHHNMVEGCLPHFSDTESHQKLVVSRTIADKLNLKTGQRIFAYFINKQ 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
G+R++ +T+ G++ +D+ + + L A + SG E+ V D ++
Sbjct: 181 GVRTRRFTIAGIYATNMKQFDSQICFTDLYTANKLNGWEPDQYSGAELQVDDFSQLDAVS 240
Query: 242 ENIVRI-------LGNGVVVIDWQQRYQIFFSCY 268
++ G + ++ FS
Sbjct: 241 LRVLEKVKNTVDHYGETYSSENIIEQNPQIFSWL 274
>gi|192290236|ref|YP_001990841.1| hypothetical protein Rpal_1840 [Rhodopseudomonas palustris TIE-1]
gi|192283985|gb|ACF00366.1| protein of unknown function DUF214 [Rhodopseudomonas palustris
TIE-1]
Length = 408
Score = 77.5 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/283 (15%), Positives = 90/283 (31%), Gaps = 21/283 (7%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + FE I A R+L ++ + + G+ IGV ++ + +++ G + + IKR
Sbjct: 1 MKRWLPFEWIAAVRFLLDG------AVQTLVIVGGIAIGVGVIVFMSAMLAGLQANFIKR 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
VL + + + ++ +S + + + V
Sbjct: 55 VLTSVPQIQLLPPDQVARPLRDQPGTVEAAVVQRPTQRMISIDQWPKIRAEMQARPDVVY 114
Query: 121 I-------------SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK 167
S L Y + D L +
Sbjct: 115 AAATASGSALALRGDTSRAVTLYGIEPEIYFKIVKVPDFIVAGEAQVTTEGILVGIELAR 174
Query: 168 INILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGI 227
S + ++ T+ G+F + +++L+ AQ L V+ I
Sbjct: 175 DLGASLGDKIIVSTPLAGNRILTIKGIFDFGNKAANQRNTFVTLRNAQSMLGLIGGVTSI 234
Query: 228 EVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
++ V+D A E + I +L V W + FF+ ++
Sbjct: 235 DLTVEDIYAAETIAQEIQAML--QVKADSWIKTNAQFFTAVQA 275
>gi|16125183|ref|NP_419747.1| hypothetical protein CC_0931 [Caulobacter crescentus CB15]
gi|221233917|ref|YP_002516353.1| lipoprotein release ABC transporter permease LolE [Caulobacter
crescentus NA1000]
gi|13422203|gb|AAK22915.1| conserved hypothetical protein [Caulobacter crescentus CB15]
gi|220963089|gb|ACL94445.1| ABC-type transport system involved in lipoprotein release, permease
component LolE [Caulobacter crescentus NA1000]
Length = 401
Score = 77.5 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 47/276 (17%), Positives = 89/276 (32%), Gaps = 20/276 (7%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
F VA RYL SN + + GV +GV I + +++ G + +V G +
Sbjct: 2 FAFKVARRYLLSNPSQ------TLLLIAGVALGVTVFIFITALIAGLAVRLTDQVTGNSA 55
Query: 67 HVVIQQKYYPLVDYQFIANRLDFI----PDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
HV +Q ++ + + + + + S + +
Sbjct: 56 HVSLQPATRVARVLAGPDLPVESVALVSTFQRQQIRDWPMVIDLLRANPEVSAISPQISG 115
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGIS--------IGDKINILSPY 174
++ + V I + + + + L
Sbjct: 116 SAFLVRSEAVAPVAVLGVEPQGIDAISRITPNIIEGDGDLGANGLLIGVRMAEELGLGAG 175
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
V + TV G+FR D + ++SLQ A+ F+L V+ IEV +KDP
Sbjct: 176 QSVLLRTERGVERQLTVRGVFRTGLQSLDERVAFLSLQTARPLFDLPEGVTNIEVKLKDP 235
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
T + G+ WQ++ ++
Sbjct: 236 QDARATARFLGEA--TGLRATPWQEKNVGLEDALKA 269
>gi|319901917|ref|YP_004161645.1| hypothetical protein Bache_2088 [Bacteroides helcogenes P 36-108]
gi|319416948|gb|ADV44059.1| protein of unknown function DUF214 [Bacteroides helcogenes P
36-108]
Length = 414
Score = 77.1 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 56/280 (20%), Positives = 108/280 (38%), Gaps = 23/280 (8%)
Query: 5 SRFEVIVAWRYLF-SNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F +A R S+ A I+ IG+ IG+ +I+ +SV+ GF+ ++ +++G
Sbjct: 1 MNFSRFIALRIYRNSDPGKQVSRPAVLIAMIGIAIGLAVMIIAVSVIVGFKSEVRDKIVG 60
Query: 64 INGHVV-------IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
H+ + P+V + L P V V + + + + V
Sbjct: 61 FGAHIQISNLNAARSYETPPVVVGDSMLAALSDYPGVEHVQRYSTKPGMIKTAEAFQGIV 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
L D ++ + +D V+I + L+ L + +GDKI+ +
Sbjct: 121 LKGVGPEYDRAFFRRHLLEGEFPQFSDSASSNRVVISRALSDKLRLKLGDKIDTYYIQDE 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLENAVSGIEVFVKDPD 235
V R++ ++G+++ F +YDN + L + VSG+E+ ++D D
Sbjct: 181 V-------RARRLKIVGIYQTNFSEYDNLFLLTDLCLVNRLNKWEPDQVSGVELELRDYD 233
Query: 236 AIEKTHENIVRIL-------GNGVVVIDWQQRYQIFFSCY 268
+E+T I G V + +Q F
Sbjct: 234 KLEETTYQIAADTNEYPDRNGEEYCVRNVEQLNPQIFDWL 273
>gi|144898118|emb|CAM74982.1| Protein of unknown function DUF214 [Magnetospirillum
gryphiswaldense MSR-1]
Length = 416
Score = 77.1 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 46/279 (16%), Positives = 96/279 (34%), Gaps = 26/279 (9%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +A R+L R+ + S +GV +GV I + S+M GF+ D + R++
Sbjct: 1 MALPLGLSIAVRHLGHRRRQ------TLTSLVGVSLGVAFFIAIASMMQGFQRDFVNRII 54
Query: 63 GINGHVVIQQKYYPLVDYQ---------------FIANRLDFIPDVIKVLPFVSGQAFVS 107
+ H+ I+ +Y + + ++ + +
Sbjct: 55 DVAPHITIKDEYRLAPVQPVETAYPGAVVELRGIKPKEEVRGLRGARAIIDALEEMPGLK 114
Query: 108 GLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK 167
+ +L+R S + + V+ + GI IG+
Sbjct: 115 VAPTLSGNILLRFGSRDISANVTGIVPDRERLVTKLEKDLIAGSLQSLYTAANGIIIGEG 174
Query: 168 INILSPYGDVTPMGMGIRS---KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAV 224
I + + G + + V+G+FR DN Y +++AQ+ N N +
Sbjct: 175 IALKAGIGLDDMVSVVSPEGVVMRMKVVGIFRSGLTLMDNFDTYALMKKAQVLQNRPNVI 234
Query: 225 SGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQI 263
+ I + + D + + I G WQ++
Sbjct: 235 NRIRIRLDDVEQAADLAKTIEARFG--YRTESWQEQSSN 271
>gi|288802416|ref|ZP_06407855.1| membrane protein [Prevotella melaninogenica D18]
gi|288334944|gb|EFC73380.1| membrane protein [Prevotella melaninogenica D18]
Length = 415
Score = 77.1 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/274 (15%), Positives = 93/274 (33%), Gaps = 10/274 (3%)
Query: 5 SRFEVIVAWR-YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ + +A + Y ++ A I+ IGV IG+ +IV + V+ GF+ + +++G
Sbjct: 1 MNYPLFIARKIYNGGDKTRKVSKPAITIATIGVAIGLAVMIVSVCVVLGFKHTIRDKMVG 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSG-QAFVSGLSSGGSGVLVRGIS 122
H+ + Q+ D + +K +P + Q + + G+
Sbjct: 61 FGSHITVANFLTLQGSEQYPIAVNDSLIKELKAVPGIKHVQRYAYTQGILKTDNDFLGVM 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+S V + L + I+ + +
Sbjct: 121 LKGVGPDFDSTFIHNNMVEGSLPHFSATESQQKLVISKTIADKLNLKVGQRLFAYFINDQ 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
G+R++ +T+ G++ +D+ + + L A E + SG+E+ V D +
Sbjct: 181 GVRTRKFTIAGIYETNMKQFDSQICFTDLYTANKLNGWEADQYSGVELLVNDFSQLNNIT 240
Query: 242 ENIVRI-------LGNGVVVIDWQQRYQIFFSCY 268
++ G + + FS
Sbjct: 241 LRVLNKVKNTTDHYGETYSAENIIDQNPQIFSWL 274
>gi|86750990|ref|YP_487486.1| hypothetical protein RPB_3882 [Rhodopseudomonas palustris HaA2]
gi|86574018|gb|ABD08575.1| Protein of unknown function DUF214 [Rhodopseudomonas palustris
HaA2]
Length = 408
Score = 77.1 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/283 (14%), Positives = 86/283 (30%), Gaps = 21/283 (7%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + F I A R+L ++ + + G+ IGV ++ + +++ G + + IKR
Sbjct: 1 MKRWLPFAWIAAVRFLLDG------ALQTLVIVGGIAIGVGVIVFMSAMLAGLQANFIKR 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
VL + + + ++ +S + + + V
Sbjct: 55 VLTSQPQIQLIPPDQVARPLRDEPGTVEIATVQRPTQRVISIDQWPKIRAEMQARPDVVY 114
Query: 121 I-------------SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK 167
S L Y + D L +
Sbjct: 115 AAATASGSALALRGDTSRAITLYGIEPEIYFQIVKVPDFIVAGEAQITTEGILIGVELAR 174
Query: 168 INILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGI 227
S + ++ T+ G+F + +++L+ AQ L ++ +
Sbjct: 175 DLGASLGDKLIVSTSLAGNRVLTIKGIFDFGNKAANQRNTFVTLRNAQSMLGLIGGITSV 234
Query: 228 EVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
++ V D E + I L V W + FF+ ++
Sbjct: 235 DITVADIYTAETIAQEIQATLP--VKADSWIRTNAQFFTAVKA 275
>gi|254483276|ref|ZP_05096508.1| efflux ABC transporter, permease protein [marine gamma
proteobacterium HTCC2148]
gi|214036499|gb|EEB77174.1| efflux ABC transporter, permease protein [marine gamma
proteobacterium HTCC2148]
Length = 413
Score = 77.1 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 50/269 (18%), Positives = 99/269 (36%), Gaps = 19/269 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG----- 63
+AWR L+ N + I + + ++IGV A+I+ S+M G ++M++ L
Sbjct: 12 FTLAWRNLWRNHRRTLIMLIA------IVIGVWAMILFSSLMAGMVDEMVRGGLRTLPGE 65
Query: 64 -INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H + L + V + + + +SS + ++ +
Sbjct: 66 VQIHHPDYRDDPSIANSIDAPQGALLERLNNPPVTGWAARIKVPAMISSERANRGIQLLG 125
Query: 123 NSDFSYLQNSFS--RFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ F + KG++IG+ LA L +G ++ I+S D
Sbjct: 126 VDPAQEVSLGFDPTNIVEGRFLEGPDDKGLVIGRKLAERLETRLGKRVVIMSQDPDNNV- 184
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ V+G+++ R + VY L+ Q N++N VS I + D +
Sbjct: 185 ----ADRGIRVVGIYQARLQATEELNVYGGLETLQKMLNVDNQVSEIAITGDDFRQVASW 240
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
I + G + + W + S +
Sbjct: 241 WPQIQQATGPELETVPWMELDGYLESMMK 269
>gi|160891788|ref|ZP_02072791.1| hypothetical protein BACUNI_04245 [Bacteroides uniformis ATCC 8492]
gi|156858266|gb|EDO51697.1| hypothetical protein BACUNI_04245 [Bacteroides uniformis ATCC 8492]
Length = 414
Score = 77.1 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 57/280 (20%), Positives = 108/280 (38%), Gaps = 23/280 (8%)
Query: 5 SRFEVIVAWRYLF-SNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+A R S A I+ +G+ +G+ +I+ +SV+ GF+ ++ +++G
Sbjct: 1 MNLSRFIALRIYRNSEPGKQVSRPAVLIAMVGIALGLAVMIIAVSVIVGFKSEVRDKIVG 60
Query: 64 INGHVV-------IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
H+ + P+V + L P+V V + + + + V
Sbjct: 61 FGAHIQIGNLDAARSYETRPVVVGDSMMAALSDYPEVKHVQRYSTKPGMIKTADAFQGMV 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
L D ++ +D V+I K LA L + +GDKI+ D
Sbjct: 121 LKGVGQEYDSTFFHRHLLEGEFPQFSDSASSNRVVISKSLANKLQLKLGDKIDTYFIQDD 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPD 235
V R++ ++G+++ F +YDN + L N + VSG+E+ ++D D
Sbjct: 181 V-------RARRLKIVGIYQTNFSEYDNLFLLTDLYLVNRLNNWEPDQVSGVELEIRDYD 233
Query: 236 AIEKTHENIV-------RILGNGVVVIDWQQRYQIFFSCY 268
+E+T I G V + +Q F+
Sbjct: 234 KLEETTYEIAVDTDENPDRYGAEYCVRNVEQLNPQIFAWL 273
>gi|193215889|ref|YP_001997088.1| hypothetical protein Ctha_2190 [Chloroherpeton thalassium ATCC
35110]
gi|193089366|gb|ACF14641.1| protein of unknown function DUF214 [Chloroherpeton thalassium ATCC
35110]
Length = 429
Score = 77.1 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 47/289 (16%), Positives = 108/289 (37%), Gaps = 25/289 (8%)
Query: 5 SRFEVIVAWRYLFSNRKNAFIS--IASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FE+ +A R+ F ++ I+ +G+M+G ALI+ +S++ GF +++ K+++
Sbjct: 1 MKFELTIAHRFTFPPSRSGVKRPAFIVTIAMLGIMLGTTALILTLSIVQGFSDEIKKKIV 60
Query: 63 GINGHVVIQQKYYPLVDYQF-------IANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSG 115
G H+ + Q + D + +D + + + G
Sbjct: 61 GFGSHIQVTQVGGRVFDLASSPFDDLAHVSNVDALSPFYQTDVILKGSREDGKEIFIEPA 120
Query: 116 VLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARN---------------L 160
VL I + D S++++ + + L + +
Sbjct: 121 VLKGIIPSEDVSFIRDKITEGVYFTEVTGAHVAANELYVILGKKLAQRIGAKVGSSVLLM 180
Query: 161 GISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMR-FPDYDNGMVYMSLQEAQLYFN 219
+ + N+ + + +R + V+G++ +D MV+ + + F
Sbjct: 181 SSNELESANLFNKNLRLEDALSMLRLMNGRVVGIYETGLAQGFDETMVFAPYFQLETNFV 240
Query: 220 LENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ +VSGI++ + D I +T E+I + + Y F+
Sbjct: 241 KKGSVSGIDIRTANIDRIGETLESISNEMSYPFIARSIYDIYYNIFAWL 289
>gi|327314519|ref|YP_004329956.1| efflux ABC transporter permease [Prevotella denticola F0289]
gi|326944692|gb|AEA20577.1| efflux ABC transporter, permease protein [Prevotella denticola
F0289]
Length = 415
Score = 77.1 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/274 (16%), Positives = 95/274 (34%), Gaps = 10/274 (3%)
Query: 5 SRFEVIVAWR-YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ + +A + Y ++ A I+ +GV IG+ +IV + V+ GF+ + +V+G
Sbjct: 1 MNYPLFIARKIYNGGDKTRKVSKPAIRIATVGVAIGLAVMIVSVCVVLGFKHTIRDKVVG 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSG-QAFVSGLSSGGSGVLVRGIS 122
H+ + Q+ D + V+K +P V Q +V + GI
Sbjct: 61 FGSHITVADFLTLQSSEQYPIQVSDSLIKVLKAVPGVRHVQRYVYTQGILKTDNDFLGIV 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+S + V + L + I+ +
Sbjct: 121 LKGVGPDFDSTFIHHNMVEGCLPHFSDTESHQKLVVSRTIADKLNLKTGQRIFAYFINKQ 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
G+R++ +T+ G++ +D+ + + L A + SG E+ V D ++
Sbjct: 181 GVRTRRFTIAGIYATNMKQFDSQICFTDLYTANKLNGWEPDQYSGAELQVDDFSQLDAVS 240
Query: 242 ENIVRI-------LGNGVVVIDWQQRYQIFFSCY 268
++ G + ++ FS
Sbjct: 241 LRVLEKVKNTVDHYGETYSSENIIEQNPQIFSWL 274
>gi|323345160|ref|ZP_08085384.1| ABC superfamily ATP binding cassette transporter permease protein
[Prevotella oralis ATCC 33269]
gi|323094430|gb|EFZ37007.1| ABC superfamily ATP binding cassette transporter permease protein
[Prevotella oralis ATCC 33269]
Length = 415
Score = 77.1 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/274 (16%), Positives = 86/274 (31%), Gaps = 10/274 (3%)
Query: 5 SRFEVIVAWR-YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ +A R Y + K I+ GV IG+ +IV + V+ GF+ + +V+G
Sbjct: 1 MNLPLFIARRIYSDNGDKRKVSKPVIRIATAGVAIGLAVMIVSVCVVFGFKHAIRDKVVG 60
Query: 64 INGH-VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H V + I + + + Q F + G+
Sbjct: 61 FGSHIQVADFMTLQSSEMFPIEMSDSMLNVLRHIQGVQHVQRFAMKQGILKTDSDFLGVM 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
++ V R G + + + ++ +
Sbjct: 121 FKGVDEDFDTTFIHQNLVEGSIPRFSGKVSHNKILISEAMANKLDLRCGQRIFAYFIDNN 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
G+R + +T+ G++R YD M + L E + +G E+ V+D D + T
Sbjct: 181 GVRMRRFTISGIYRTNLSQYDKVMCFTDLYTVVKLNGWEADQATGAELTVRDFDQVNTTE 240
Query: 242 ENIVR-------ILGNGVVVIDWQQRYQIFFSCY 268
+ ++ G + FS
Sbjct: 241 DILINKVNRTIDKYGETYSSKTIRDINPQIFSWL 274
>gi|212634589|ref|YP_002311114.1| hypothetical protein swp_1759 [Shewanella piezotolerans WP3]
gi|212556073|gb|ACJ28527.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
Length = 360
Score = 77.1 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 50/221 (22%), Positives = 84/221 (38%), Gaps = 2/221 (0%)
Query: 50 MNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGL 109
MNG + KR+LG + L D+Q +L + V V P V+ QA +
Sbjct: 1 MNGLEGQLKKRILGAVP-QLTIHSNVALNDWQQDVAQLSALKGVQGVTPSVTTQAMLQSP 59
Query: 110 SSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN 169
S+ G+ + + L + + + G+ +I+G +LAR L + +G+KI
Sbjct: 60 SNIGAAQIYGVYPQQEQKLLSLTRNTYSGDFDALVAGMYRIILGAELARKLDVVVGNKIR 119
Query: 170 ILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIE 228
+LS G V I S+ + D + YM +AQ V +
Sbjct: 120 VLSGDGVVYTPLGPIPSQRKFTVAGIFEMGSQVDASVAYMHHDDAQRLMRQTPGQVKQLR 179
Query: 229 VFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
V++ DP ++ + V DW Y F +
Sbjct: 180 VYLDDPFKASTIAPSVQGYFSHEVTTTDWHDSYGHLFGAVK 220
>gi|110597555|ref|ZP_01385841.1| Protein of unknown function DUF214 [Chlorobium ferrooxidans DSM
13031]
gi|110340874|gb|EAT59348.1| Protein of unknown function DUF214 [Chlorobium ferrooxidans DSM
13031]
Length = 416
Score = 77.1 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 47/269 (17%), Positives = 98/269 (36%), Gaps = 8/269 (2%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A R+ F+ ++ I++ S IS G++IGV L+VVMSV+NGF++ + I+
Sbjct: 5 LWIARRFSFARKRFRIINVISAISLAGIVIGVSTLLVVMSVLNGFQKLARDLFITIDSPA 64
Query: 69 VIQQ-KYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ K + N + + V F G+A ++ ++ +
Sbjct: 65 QLVPLKGRSFAVSDSLLNSIRAVEGVGSAERFAEGEAIMATRDKSELVIIKGLSDKAHRR 124
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD-VTPMGMGIRS 186
+ + + G+ + DL + I I P M + +
Sbjct: 125 LVSQTHAANPFFSGETIAVGELLAYRTDLYAFSQVKIFSPELISFGLESLSQPYMMPVLT 184
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAV-SGIEVFVKDPDAIEKTHENIV 245
+ +D+ V S + AQ L N + SG+++ + + E ++
Sbjct: 185 IPEATVSSLFSLQKIFDDRYVLTSERFAQRVLLLGNGLCSGVDIRAGEGVSNETFIRSLR 244
Query: 246 RIL-----GNGVVVIDWQQRYQIFFSCYE 269
L + ++Y F+ +
Sbjct: 245 SWLARSPVKTNCRIRSLDEKYSSVFAVMK 273
>gi|294496640|ref|YP_003543133.1| hypothetical protein Mmah_1994 [Methanohalophilus mahii DSM 5219]
gi|292667639|gb|ADE37488.1| protein of unknown function DUF214 [Methanohalophilus mahii DSM
5219]
Length = 389
Score = 77.1 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 51/267 (19%), Positives = 107/267 (40%), Gaps = 21/267 (7%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
FE +A R++ S ++N F S+ + + + ++V+MS+M GF +++I++ + +
Sbjct: 2 FEFRIARRHIASKQRNTFFSVLAVALAV------VVIVVLMSLMTGFTDELIEKTVENSP 55
Query: 67 HVVIQQKYYPL---VDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
H+V+ Y + + ++ P V ++ QA ++ + + +
Sbjct: 56 HIVVYPAEEKDAGIHLYDYYKSVIENTPKVTASSAYLEKQAVITYRDNSAGINIFGVVPP 115
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + GN + GKG++IG +LA +L G+ I I SP
Sbjct: 116 DEDNVMHLKPDIVKGNYEDLARSGKGILIGDELADDLETRPGEWIQINSPQAGD------ 169
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ D + Y L+ Q +++ + ++ I + V DP EKT
Sbjct: 170 ----LSLKVIGIFDSGTGRDKSVAYARLETLQDFYDEKGTITAISMRVTDPYDAEKTALE 225
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYES 270
I + G+ W + +
Sbjct: 226 IEKA--TGLKADSWIEINSQLLELLNT 250
>gi|317480268|ref|ZP_07939373.1| hypothetical protein HMPREF1007_02490 [Bacteroides sp. 4_1_36]
gi|316903561|gb|EFV25410.1| hypothetical protein HMPREF1007_02490 [Bacteroides sp. 4_1_36]
Length = 414
Score = 77.1 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 57/280 (20%), Positives = 108/280 (38%), Gaps = 23/280 (8%)
Query: 5 SRFEVIVAWRYLF-SNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+A R S A I+ +G+ +G+ +I+ +SV+ GF+ ++ +++G
Sbjct: 1 MNLSRFIALRIYRNSEPGKQVSRPAVLIAMVGIALGLAVMIIAVSVIVGFKSEVRDKIVG 60
Query: 64 INGHVV-------IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
H+ + P+V + L P+V V + + + + V
Sbjct: 61 FGAHIQIGNLDAARSYETRPVVVGDSMMAALSDYPEVKHVQRYSTKPGMIKTADAFQGMV 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
L D ++ +D V+I K LA L + +GDKI+ D
Sbjct: 121 LKGVGQEYDSTFFHRHLLEGEFPQFSDSASSNRVVISKSLANKLQLKLGDKIDTYFIQDD 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPD 235
V R++ ++G+++ F +YDN + L N + VSG+E+ ++D D
Sbjct: 181 V-------RARRLKIVGIYQTNFSEYDNLFLLTDLYLVNRLNNWEPDQVSGVELEIRDYD 233
Query: 236 AIEKTHENIV-------RILGNGVVVIDWQQRYQIFFSCY 268
+E+T I G V + +Q F+
Sbjct: 234 KLEETTYEIAADTDENPDRYGAEYCVRNVEQLNPQIFAWL 273
>gi|224535629|ref|ZP_03676168.1| hypothetical protein BACCELL_00493 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522750|gb|EEF91855.1| hypothetical protein BACCELL_00493 [Bacteroides cellulosilyticus
DSM 14838]
Length = 414
Score = 77.1 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 62/280 (22%), Positives = 108/280 (38%), Gaps = 23/280 (8%)
Query: 5 SRFEVIVAWRYLF-SNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ +A R S+ A I+ IGV IG+ +I+ +SV+ GF+ ++ +V+G
Sbjct: 1 MSLALFLARRIYRDSDAGKQVSRPAVLIALIGVAIGLAVMIITVSVIVGFKNEVRGKVIG 60
Query: 64 I-------NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
N + P+V + + L P+V V + + V V
Sbjct: 61 FGADIQITNSDAARSYETRPVVVNDSVISILSEYPEVKHVQRYSTKPGMVKTAEDFQGMV 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
L D ++ + +D V+I K LA L + +GDKI+ D
Sbjct: 121 LKGIGPEFDPAFFREHLVEGELPQFSDTASSNRVVISKALATKLRLKLGDKIDTYYIQDD 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPD 235
+ R++ ++G+++ F +YDN + L N VSG E+ V+D D
Sbjct: 181 I-------RARRLQIVGIYQTNFSEYDNLFLLTDLYLVNRLNNWEPGQVSGAELQVRDYD 233
Query: 236 AIEKTHENIVRIL-------GNGVVVIDWQQRYQIFFSCY 268
+E+ I L G V + +Q F+
Sbjct: 234 RLEEITYQIAADLDGMEDRYGEDYCVRNVEQLNPQIFAWL 273
>gi|154252976|ref|YP_001413800.1| hypothetical protein Plav_2534 [Parvibaculum lavamentivorans DS-1]
gi|154156926|gb|ABS64143.1| protein of unknown function DUF214 [Parvibaculum lavamentivorans
DS-1]
Length = 416
Score = 76.7 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 55/281 (19%), Positives = 100/281 (35%), Gaps = 26/281 (9%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + +A +L R+ + +S +GV +GV I SVM+G +D+ +R++
Sbjct: 1 MFWQVVFSIAAAHLTFRRRQ------TIVSTLGVALGVGFFIATSSVMSGSEKDLTQRLV 54
Query: 63 GINGHVVIQQKYYPLVDYQ---------------FIANRLDFIPDVIKVLPFVSGQAFVS 107
H+ I+ ++ L I + ++ +S Q V
Sbjct: 55 DNAPHITIKDEFRTAAKQPVFLAFPDATVKLTNTKPREYLRGIKNYGAIVEELSQQPGVI 114
Query: 108 GLSSGGSGVLVRGISNSD---FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISI 164
++ +VR S + + R V D +G + + + S
Sbjct: 115 AEAALTGQAIVRYASKDVGAAIAGIDPEKERQLTTVERDMRQGSLMRLKTASQGIVIGSG 174
Query: 165 GDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAV 224
L T + + V+G+FR D G VYM +++AQ+ +
Sbjct: 175 MSVRLGLGMDDLATVVSPTGLVRRMKVVGIFRTGNLLLDEGQVYMLIKDAQVLLDKPFIA 234
Query: 225 SGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFF 265
+ I + V DPD E I G WQ+ + F
Sbjct: 235 NRIRIKVGDPDNAEDFAARIESRWG--YRSESWQEVNRDFL 273
>gi|325270975|ref|ZP_08137562.1| ABC superfamily ATP binding cassette transporter permease protein
[Prevotella multiformis DSM 16608]
gi|324986772|gb|EGC18768.1| ABC superfamily ATP binding cassette transporter permease protein
[Prevotella multiformis DSM 16608]
Length = 415
Score = 76.7 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 45/274 (16%), Positives = 93/274 (33%), Gaps = 10/274 (3%)
Query: 5 SRFEVIVAWR-YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F + +A + Y ++ A I+ GV IG+ +IV + V+ GF+ + +V+G
Sbjct: 1 MNFPLFIARKIYDGGDKTRKVSKPAIRIATAGVAIGLAVMIVSVCVVLGFKHTIRDKVVG 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSG-QAFVSGLSSGGSGVLVRGIS 122
+ + Q+ D + V+K +P V Q +V + GI
Sbjct: 61 FGSDITVADFLTLQSSEQYPIQVSDSLIKVLKAVPGVKHVQRYVYTQGILKTDNDFLGIV 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+S V + L + I+ + +
Sbjct: 121 MKGVGPDFDSTFIHNSMVEGGLPHFSDTESHQKLVVSRTIADKLNLKVGQRIFAYFINKQ 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
G+R++ +T+ G++ +D+ + + L A + SG E+ V D ++
Sbjct: 181 GVRTRRFTIAGIYATNMKQFDSQICFTDLYTANKLNGWEPDQYSGAELQVDDFSQLDAVS 240
Query: 242 ENIVRI-------LGNGVVVIDWQQRYQIFFSCY 268
++ G + ++ FS
Sbjct: 241 RRVLNKVKNTIDHYGETYSSENITEQNPQIFSWL 274
>gi|255008389|ref|ZP_05280515.1| ABC transporter permease protein [Bacteroides fragilis 3_1_12]
Length = 435
Score = 76.7 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 63/279 (22%), Positives = 109/279 (39%), Gaps = 23/279 (8%)
Query: 6 RFEVIVAWRYLF-SNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
R +A R ++ A I+ IG+ IG+ +I+ +SV+ GF+ ++ +V+G
Sbjct: 23 RLSYFLARRIYRDTDGGKQVSRPAVLIAMIGIAIGLAVMIIAVSVVIGFKSEVRNKVIGF 82
Query: 65 NGHVVIQQKY-------YPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVL 117
H+ I +P+V + L P+V V + + + + VL
Sbjct: 83 GSHIQISNFDAVGSYETHPVVVDDSMMIALSARPEVKHVQRYSTKPGMIKTDDAFQGMVL 142
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
D ++ ++ V +D V+I K +A L + +GDKI DV
Sbjct: 143 KGVGPEFDSAFFRDHLVEGEIPVFSDTASTNQVVISKAIADRLKLKLGDKIYAYFIQKDV 202
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDA 236
R++ TV G+++ F +YDN + L N VSG E+ V+D D
Sbjct: 203 -------RARRLTVKGIYQTNFSEYDNLFLLTDLYLVNRLNNWAPGQVSGAELQVRDYDK 255
Query: 237 IEKTHENI-------VRILGNGVVVIDWQQRYQIFFSCY 268
+E I + G V +Q F+
Sbjct: 256 LEDITYGIAVDTDNKQDVYGGTYYVQSIEQMNPQIFAWL 294
>gi|332141066|ref|YP_004426804.1| lipoprotein releasing system transmembrane protein LolE
[Alteromonas macleodii str. 'Deep ecotype']
gi|327551088|gb|AEA97806.1| lipoprotein releasing system transmembrane protein LolE
[Alteromonas macleodii str. 'Deep ecotype']
Length = 471
Score = 76.7 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKN--AFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+F +A+RY S++ + +F+S + S G+ +G+MALI+V+SVMNG + +R
Sbjct: 1 MFYPVSAFIAYRYAKSSKSSQTSFVSFINRFSVAGIALGLMALIIVVSVMNGLEGQLKQR 60
Query: 61 VLGINGHVV 69
VLGI H+
Sbjct: 61 VLGIVPHIE 69
Score = 52.8 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 51/139 (36%), Gaps = 2/139 (1%)
Query: 133 FSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVL 192
G ++ + IIG+ LA L +GD++ ++ V + S+ +
Sbjct: 191 NHMEQGRFNDLVEGSFSAIIGRALAIKLDARVGDRLRVMVAGASVYTPFGRMPSQRLVTI 250
Query: 193 GMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHENIVRILGNG 251
D+ ++YM+L++ + +F+ D +++ +G
Sbjct: 251 VGVFDMGSQMDDKVMYMNLKDVNRLMRDPKGNGRSLRLFLNDAFNYLAVVDHLTDTMGVS 310
Query: 252 V-VVIDWQQRYQIFFSCYE 269
V + W++R F +
Sbjct: 311 VSTIRTWRERQGPLFDAVK 329
>gi|332180741|gb|AEE16429.1| protein of unknown function DUF214 [Treponema brennaborense DSM
12168]
Length = 426
Score = 76.7 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 48/264 (18%), Positives = 100/264 (37%), Gaps = 3/264 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ + V+ R+ +R ++ F++ + + GVM LIV +SVMNGF+ I ++ I
Sbjct: 1 MNWILFVSRRFAQVDRSGR-SAVTGFLASLSICFGVMTLIVTVSVMNGFQMGFIDSIMEI 59
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + + A D ++ V PF Q ++G+ S +R +S +
Sbjct: 60 SSAHIRLTPDADFDEAALEAAAADPANGIVSVQPFYEAQTLMAGVGGRQSAAFIRAVSRN 119
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + G I+ + L + + +
Sbjct: 120 VYREDAGFARELRMYSGSFDLESPGSIVLGSELARRLGARVGSKVNLLALSGGSDVDLIS 179
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
++ TV G+F + D + ++SL++ + +F +A V + D +A + +
Sbjct: 180 ENRVCTVTGIFSCGYADINASYSFVSLEDGERFFG-SDARKLYAVKLSDAEADARVIARL 238
Query: 245 VRILGNGVVVIDWQQRYQIFFSCY 268
R + V W+ + FF
Sbjct: 239 SREVP-AVQAESWRSYNRSFFGAL 261
>gi|83814405|ref|YP_445639.1| permease [Salinibacter ruber DSM 13855]
gi|83755799|gb|ABC43912.1| putative permease domain protein [Salinibacter ruber DSM 13855]
Length = 452
Score = 76.7 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 58/272 (21%), Positives = 116/272 (42%), Gaps = 9/272 (3%)
Query: 6 RFEVIVAWRYLF----SNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
RFE +++RYL+ + +F+ +++ GV +GV AL++ ++++ GF E++ +++
Sbjct: 40 RFERFMSFRYLWGAEGREQGRSFLRFIIYVAVGGVTLGVAALLLALAIVRGFSEEIEEKI 99
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKV-LPFVSGQAFVSGLSSGGSGVLVRG 120
+G H+ + + + R + V Q + S +V
Sbjct: 100 VGFGAHIQVSSYVQDEPLDRGASLRRQLHEMKGVSGVSPVVEQPVLLRYSEDAIDGVVLL 159
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ SYL G V + G+++G+++A LG+++GD++ + + M
Sbjct: 160 GMDRLPSYLGKRVEAGGGAVDGEKGGEPGLVVGREMATRLGLAVGDRVTAFALQQGESGM 219
Query: 181 ---GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDA 236
G R + + + G++ D D+ V+ S A+ +L +VS V V DP
Sbjct: 220 SMGGQRPRVEQFRIHGIYDTSLQDIDDVYVFSSTAVARELGSLAAPSVSRFNVTVSDPSR 279
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
I+ I G V Q+Y F+
Sbjct: 280 IDSLAAQIENRFGFPVSARTVYQQYAGLFAWV 311
>gi|145629729|ref|ZP_01785525.1| adenosylmethionine--8-amino-7-oxononanoate transaminase
[Haemophilus influenzae 22.1-21]
gi|144978066|gb|EDJ87845.1| adenosylmethionine--8-amino-7-oxononanoate transaminase
[Haemophilus influenzae 22.1-21]
Length = 158
Score = 76.7 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 43/101 (42%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +A RY + + F + + ++ +G+++GVMALI+V+SVMNG ++VL
Sbjct: 1 MNFPISFYIALRYWRAKSADRFGRLVTNLASLGIVLGVMALIIVLSVMNGLENYQKQQVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQ 103
H ++ + + V V Q
Sbjct: 61 SSIPHAIVSEDQPISTEKTLENLPHFVQKAVPINTTNVIYQ 101
>gi|313146112|ref|ZP_07808305.1| ABC transporter [Bacteroides fragilis 3_1_12]
gi|313134879|gb|EFR52239.1| ABC transporter [Bacteroides fragilis 3_1_12]
Length = 414
Score = 76.7 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 63/280 (22%), Positives = 109/280 (38%), Gaps = 23/280 (8%)
Query: 5 SRFEVIVAWRYLF-SNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
R +A R ++ A I+ IG+ IG+ +I+ +SV+ GF+ ++ +V+G
Sbjct: 1 MRLSYFLARRIYRDTDGGKQVSRPAVLIAMIGIAIGLAVMIIAVSVVIGFKSEVRNKVIG 60
Query: 64 INGHVVIQQKY-------YPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
H+ I +P+V + L P+V V + + + + V
Sbjct: 61 FGSHIQISNFDAVGSYETHPVVVDDSMMIALSARPEVKHVQRYSTKPGMIKTDDAFQGMV 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
L D ++ ++ V +D V+I K +A L + +GDKI D
Sbjct: 121 LKGVGPEFDSAFFRDHLVEGEIPVFSDTASTNQVVISKAIADRLKLKLGDKIYAYFIQKD 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPD 235
V R++ TV G+++ F +YDN + L N VSG E+ V+D D
Sbjct: 181 V-------RARRLTVKGIYQTNFSEYDNLFLLTDLYLVNRLNNWAPGQVSGAELQVRDYD 233
Query: 236 AIEKTHENI-------VRILGNGVVVIDWQQRYQIFFSCY 268
+E I + G V +Q F+
Sbjct: 234 KLEDITYGIAVDTDNKQDVYGGTYYVQSIEQMNPQIFAWL 273
>gi|198275269|ref|ZP_03207800.1| hypothetical protein BACPLE_01428 [Bacteroides plebeius DSM 17135]
gi|198271852|gb|EDY96122.1| hypothetical protein BACPLE_01428 [Bacteroides plebeius DSM 17135]
Length = 416
Score = 76.3 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 52/282 (18%), Positives = 110/282 (39%), Gaps = 23/282 (8%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFIS-IASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+ S ++ +A R S +S A I+ G+ IG+ +IV ++V+ GF+ + +V
Sbjct: 1 MMSNWKFFIARRIYRSREGEKEVSKPAVRIAMAGIAIGLAVMIVSVAVVIGFKHQVRDKV 60
Query: 62 LGINGHVV-------IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
+G+ +V + P+V + + + IP V V + + + +
Sbjct: 61 IGMGSDIVVSSIEGAQLYQMNPVVANDSLLSVIRNIPQVSHVQRYATKPGMIMTADNFQG 120
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
++ D++YL+ D V++ + +A L + +GDK+
Sbjct: 121 MIVKGVSQEYDWTYLKAHLQEGEIPALTDSVASNRVLVSRSMADKLALKVGDKLYTYYIE 180
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKD 233
G+V R++ TV G+F+ F +D+ + + + V G+EV V D
Sbjct: 181 GNV-------RARRLTVSGIFQTNFSAFDDYFLITDMYTVNRLNGWEPDQVGGVEVAVSD 233
Query: 234 PDAIEKTHENIVRILGNG-------VVVIDWQQRYQIFFSCY 268
+ +++I + ++ Y F+
Sbjct: 234 YRFLNSVNDDIRGHIQEQTDRYGAIYCSRTSEELYPQIFAWL 275
>gi|21673928|ref|NP_661993.1| hypothetical protein CT1102 [Chlorobium tepidum TLS]
gi|21647069|gb|AAM72335.1| conserved hypothetical protein [Chlorobium tepidum TLS]
Length = 416
Score = 76.3 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 49/274 (17%), Positives = 101/274 (36%), Gaps = 18/274 (6%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A RY F+ ++ I+I S IS G+++GV L+VVMSV+NGF++ + + G V
Sbjct: 5 IWIAGRYSFARKRFRVINIISGISLAGIVVGVSTLLVVMSVLNGFQKLARDLFVTVEGPV 64
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
I + D ++ + S ++VRG++
Sbjct: 65 QIVPAQGRSLVVSDSLLAAIARLDGVETAHPFVEGQAIITASGKSELIMVRGLTAEAQRS 124
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
L + + + G+ G LA L + + + + SP + + +
Sbjct: 125 L-----MQTTSTTQPYFSTDGISAGNLLAERLRLYPDEPVRLFSPELISAGLQALSQPEL 179
Query: 189 YTV-------LGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKT 240
+ +D+ V ++ AQ SGI++ K + E
Sbjct: 180 MPALSMSDVRVQSSFSLQKLFDDRYVLAPVEMAQNILLFGRGRYSGIDIRGKSGVSDETL 239
Query: 241 HENIVRILG-----NGVVVIDWQQRYQIFFSCYE 269
+ + + V+ ++R++ F+ +
Sbjct: 240 EARLREWISATHREKTLRVVTLRERHRDMFAVMQ 273
>gi|260592416|ref|ZP_05857874.1| putative membrane protein [Prevotella veroralis F0319]
gi|260535652|gb|EEX18269.1| putative membrane protein [Prevotella veroralis F0319]
Length = 415
Score = 76.3 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 40/274 (14%), Positives = 91/274 (33%), Gaps = 10/274 (3%)
Query: 5 SRFEVIVAWR-YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ + +A + Y ++ A I+ IGV IG+ +I+ +SV+ GF+ + +V+G
Sbjct: 1 MNYPLFIARKIYNGGDKTRKVSKPAIRIATIGVAIGLAVMIISVSVVLGFKHSIRDKVIG 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSG-QAFVSGLSSGGSGVLVRGIS 122
+ + Q+ D + V+K P + Q + + G+
Sbjct: 61 FGSDITVADFLTLQGSEQYPIQINDSLIRVLKSTPGIKHVQRYAYTQGILKTNDDFLGVL 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+S + + + + + I+ + +
Sbjct: 121 LKGVGPEFDSTFIHSNMIEGTLPKFSDSESHQKIVISKTIADKLNLKVGQRLFAYFINKQ 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
G+R++ +T+ G++ +D+ + + L + SG E+ V D +
Sbjct: 181 GVRTRKFTITGIYATNMKQFDSQICFTDLYTINKLNGWEPDQYSGAELQVNDFSQLNLIT 240
Query: 242 ENIVRI-------LGNGVVVIDWQQRYQIFFSCY 268
I+ G + + FS
Sbjct: 241 MRILNKVKNTVDHYGETYSAENITEMNPQIFSWL 274
>gi|330506707|ref|YP_004383135.1| ABC transporter permease [Methanosaeta concilii GP-6]
gi|328927515|gb|AEB67317.1| ABC transporter, permease protein [Methanosaeta concilii GP-6]
Length = 386
Score = 76.3 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 43/266 (16%), Positives = 92/266 (34%), Gaps = 21/266 (7%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+E +A R++ N + + + V + V +++ M +M+GF+E++I + N
Sbjct: 2 YEFSIAQRHILRNPR------MALFTVAAVTLAVAIIVLFMGIMSGFQEEIITTTVENNP 55
Query: 67 H--VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H + ++ + Y+ ++N L P V V ++G+ + +
Sbjct: 56 HIYIQPKEDENYIYLYRTVSNILWAYPGVEAVSARLAGKGAAKYKDEVRAISFLGVNPED 115
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + G+ + R IG LA L I D + +
Sbjct: 116 EDRMMDVRSDIISGDFQDLERRKYAAFIGTGLAEKLKIGQEDDFTLTRGNISLRI----- 170
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ D+ ++Y+ L AQ + + VS ++ V D + ++
Sbjct: 171 ------KVAGLFETGTAADDSLIYIPLMLAQDLIEMGDVVSEVDAKVADIYQVSLITTDL 224
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYES 270
R WQ + E+
Sbjct: 225 NRRF--AYDSKSWQDMNADILNLIET 248
>gi|146342763|ref|YP_001207811.1| lipoprotein ABC transporter permease [Bradyrhizobium sp. ORS278]
gi|146195569|emb|CAL79596.1| Putative ABC transporter, permease protein; putative
lipoprotein-releasing system transmembrane protein lolC
[Bradyrhizobium sp. ORS278]
Length = 408
Score = 76.3 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 43/281 (15%), Positives = 85/281 (30%), Gaps = 21/281 (7%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M+ + FE + A R+L R + G+ IGV ++ + +++ G + IKR
Sbjct: 1 MNRWLPFEWVAAVRFLREGRLQ------TLFIIGGIAIGVAVIVFMSAMLAGLEANFIKR 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
VL + + + ++ +S + + + +
Sbjct: 55 VLTSQPQIQLLTPDQVARPLRNGNRVIEDATVQRPSQRVISIDQWPKIRAQMLAMPEITA 114
Query: 121 ISN-------------SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK 167
+S S L Y + D + K
Sbjct: 115 VSPTISGSALAIRGDASRAVTLSGIEPESYFAIVRVPDYIVAGEPRLSSEDIIIGIELAK 174
Query: 168 INILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGI 227
+ ++ TV G+ + + Y++L+ AQ + V+ I
Sbjct: 175 DLGAVVGDKLNVQAASGANRVLTVTGLVDLGNKGVNQRAAYVALRTAQSLLGMIGGVTTI 234
Query: 228 EVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
++ V+D A E + I N V W + FF
Sbjct: 235 DITVQDIYAAEDIAQRIQAA--NLVKADSWIKTNAQFFVAV 273
>gi|332187900|ref|ZP_08389633.1| permease family protein [Sphingomonas sp. S17]
gi|332012061|gb|EGI54133.1| permease family protein [Sphingomonas sp. S17]
Length = 408
Score = 76.3 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 88/268 (32%), Gaps = 5/268 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +R E + RYL+ + + + I GVMIGV AL++V++VMNG + + V
Sbjct: 1 MLARHERHLIARYLWPGAGGRLVLLVAAIGCTGVMIGVAALVLVIAVMNGAQTKLADSVA 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
++GH+ I +A + +P V + P A +S +
Sbjct: 61 PVDGHLSIGVPPDARRTMGQVAAMIARLPGVARTEPIREVTAGLSIDGRITPVKVQGRDP 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + S + G L G + + P +
Sbjct: 121 RTLYRLVPTMRSALAHSPDPAGAVAIGQNAALQLGLFPGDPVAIGRVNVGPERT-----L 175
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + + + ++ L + + + V + D
Sbjct: 176 SLDLTPARIAAFYPDDDQGGEQVTLFAPLDSLPVLKDDAVVTRRVAVVLTGADREAAVRA 235
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYES 270
I R LG G + W+Q + + +
Sbjct: 236 AIQRRLGPGYPITSWRQANRALLAALVT 263
>gi|270296519|ref|ZP_06202719.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270273923|gb|EFA19785.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 414
Score = 76.0 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 57/280 (20%), Positives = 107/280 (38%), Gaps = 23/280 (8%)
Query: 5 SRFEVIVAWRYLF-SNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+A R S A I+ +G+ +G+ +I+ +SV+ GF+ ++ +++G
Sbjct: 1 MNLSRFIALRIYRNSEPGKQVSRPAVLIAMVGIALGLAVMIIAVSVIVGFKSEVRDKIVG 60
Query: 64 INGHVV-------IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
H+ + P+V + L P+V V + + + + V
Sbjct: 61 FGAHIQIGNLDAARSYETRPVVVGDSMMAALSDYPEVKHVQRYSTKPGMIKTADAFQGMV 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
L D ++ +D V+I K LA L + +GDKI+ D
Sbjct: 121 LKGVGQEYDSTFFHRHLLEGEFPQFSDSASSNRVVISKSLANKLQLKLGDKIDTYFIQDD 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPD 235
V R++ + G+++ F +YDN + L N + VSG+E+ ++D D
Sbjct: 181 V-------RARRLKIAGIYQTNFSEYDNLFLLTDLYLVNRLNNWEPDQVSGVELEIRDYD 233
Query: 236 AIEKTHENIV-------RILGNGVVVIDWQQRYQIFFSCY 268
+E+T I G V + +Q F+
Sbjct: 234 KLEETTYEIAADTDENPDRYGAEYCVRNVEQLNPQIFAWL 273
>gi|34540679|ref|NP_905158.1| hypothetical protein PG0922 [Porphyromonas gingivalis W83]
gi|34396993|gb|AAQ66057.1| membrane protein, putative [Porphyromonas gingivalis W83]
Length = 407
Score = 76.0 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 38/267 (14%), Positives = 94/267 (35%), Gaps = 7/267 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RYLFS ++ + +++ S +S I V + AL+ ++S+ NG+ ++
Sbjct: 1 MNFPFFIARRYLFSRKRFSAVNVVSLVSAIAVCVVSSALVCILSIFNGYEALIMTHSAVT 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ ++I+ L+ + I F+ + V + G+ +
Sbjct: 61 DPPLMIRSADNSLIKADDKTLLTALEAEGIGSYSFILTGEGLVKTKYRQQAVSLMGVDDR 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDR-----GKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
++ F G + D G I ++ G ++ + G + P
Sbjct: 121 YPRTVKIDSIVFAGTFATDTLSGATALNVGAAIATEMQLGAGFVEAVEVIVPRRIGLINP 180
Query: 180 MGMGIRSKSYT-VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN-AVSGIEVFVKDPDAI 237
+ KS + ++ + +S+ + + + + + ++
Sbjct: 181 LVPAGAFKSLQGQVASVFASGLQPEDNSIILSIDSLRKLLDYSDHEAEAVAIQLRTGSDA 240
Query: 238 EKTHENIVRILGNGVVVIDWQQRYQIF 264
E+ + LG+ V+D ++
Sbjct: 241 EQIALRLKETLGDSYQVLDLAGQHPEI 267
>gi|254881748|ref|ZP_05254458.1| ABC transporter permease [Bacteroides sp. 4_3_47FAA]
gi|319643715|ref|ZP_07998331.1| ABC transporter permease [Bacteroides sp. 3_1_40A]
gi|254834541|gb|EET14850.1| ABC transporter permease [Bacteroides sp. 4_3_47FAA]
gi|317384657|gb|EFV65620.1| ABC transporter permease [Bacteroides sp. 3_1_40A]
Length = 414
Score = 76.0 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 54/278 (19%), Positives = 108/278 (38%), Gaps = 23/278 (8%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASF-ISFIGVMIGVMALIVVMSVMNGFREDMIKR----- 60
+++ +A R SN +S + I+ +G+ IG+ +IV ++V+ GF+ ++ +
Sbjct: 3 WKLFIARRIYRSNEGGKEVSKPAVRIAMLGIAIGLAVMIVSVAVVIGFKHEVRDKVVGLG 62
Query: 61 --VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
++ N + P+V + + L + V V + + + S VL
Sbjct: 63 SDIVITNFDSQQSYQTVPIVANDSLLHLLKTLKGVKHVQRYSTKPGMIMTDDSFQGMVLK 122
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
D+ +L+N V +D V++ + +A L + +GDKI +V
Sbjct: 123 GVSHEYDWRFLKNHLQEGEIPVFSDTASTNKVLVSRTIADKLHLKLGDKIYTYYIEDNV- 181
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAI 237
R++ TV G+++ F YD+ + L + VSG+E+ V + +
Sbjct: 182 ------RARRLTVAGIYQTNFSAYDDLFLITDLYTVNRLNGWQKGQVSGMELEVNEYSRL 235
Query: 238 EKTHENIV-------RILGNGVVVIDWQQRYQIFFSCY 268
E E I G ++ F+
Sbjct: 236 EPVKEEIRARVDTQVDAYGGTYYTQTVEEVNPQIFAWL 273
>gi|316935182|ref|YP_004110164.1| hypothetical protein Rpdx1_3870 [Rhodopseudomonas palustris DX-1]
gi|315602896|gb|ADU45431.1| protein of unknown function DUF214 [Rhodopseudomonas palustris
DX-1]
Length = 408
Score = 76.0 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 43/283 (15%), Positives = 88/283 (31%), Gaps = 21/283 (7%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + FE I A R+L ++ + + G+ IGV ++ + +++ G + + IKR
Sbjct: 1 MKRWLPFEWIAAVRFLLDG------AVQTLVIVGGIAIGVGVIVFMSAMLAGLQANFIKR 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
VL + + + ++ +S + + + V
Sbjct: 55 VLTSVPQIQLLPPDQVARPLRDQPGTVEAAVVQRPTQRMISIDQWPKIRAEMQARPDVVY 114
Query: 121 I-------------SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK 167
S L Y + D L +
Sbjct: 115 AAATASGSALALRGDTSRAVTLYGIEPEIYFKIVKVPDFIVAGDAQVTTEGILIGIELAR 174
Query: 168 INILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGI 227
S + ++ T+ G+F + +++L+ AQ L V+ I
Sbjct: 175 DLGASLGDKIIVSTPLAGNRILTIKGIFDFGNKAANQRNTFVTLRNAQSMLGLIGGVTSI 234
Query: 228 EVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
++ V D E + I +L V W + FF+ ++
Sbjct: 235 DLTVADIYTAETIAQEIQAML--RVKADSWIKTNAQFFTAVQA 275
>gi|189500282|ref|YP_001959752.1| hypothetical protein Cphamn1_1341 [Chlorobium phaeobacteroides BS1]
gi|189495723|gb|ACE04271.1| protein of unknown function DUF214 [Chlorobium phaeobacteroides
BS1]
Length = 419
Score = 76.0 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 48/270 (17%), Positives = 95/270 (35%), Gaps = 9/270 (3%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A RY F+ ++ I++ S IS G+++GV L+VVMSV+NGF++ + + V
Sbjct: 7 IWIAQRYSFARKRFRVINVISLISLFGIILGVSTLLVVMSVLNGFQQLAWDLFVTVESPV 66
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
I ++ + S + + S G V+V+GIS +
Sbjct: 67 QILPAKEKHMEVPDSLLVRLERVSGVTSAEPFSEGSAILSGSGSGELVMVKGISQNAHQR 126
Query: 129 L--QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
L ++ Y + ++ L P + +
Sbjct: 127 LMQEDGREVPYFGAETVSVGEMLAYKAGLVPEKQVKLFSPELIALGLQSLSQPYLLPALT 186
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQL-YFNLENAVSGIEVFVKDPDAIE-KTHENI 244
+ +++ V S + A+ E+ SGI+V D + N+
Sbjct: 187 FPVVQVESVFSLQRIFNDHYVLTSREMARKILLQKESLYSGIDVRGSDKRSSHAALVRNL 246
Query: 245 VRILGNG-----VVVIDWQQRYQIFFSCYE 269
+ V+ +++Y+ F E
Sbjct: 247 RSWVRENGLEGTYVIRPLEEKYRDIFGVME 276
>gi|150006345|ref|YP_001301089.1| ABC transporter permease protein [Bacteroides vulgatus ATCC 8482]
gi|294776258|ref|ZP_06741743.1| efflux ABC transporter, permease protein [Bacteroides vulgatus
PC510]
gi|149934769|gb|ABR41467.1| ABC transporter permease protein [Bacteroides vulgatus ATCC 8482]
gi|294449941|gb|EFG18456.1| efflux ABC transporter, permease protein [Bacteroides vulgatus
PC510]
Length = 414
Score = 76.0 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 55/278 (19%), Positives = 108/278 (38%), Gaps = 23/278 (8%)
Query: 7 FEVIVAWRYLFSNRKNAFIS-IASFISFIGVMIGVMALIVVMSVMNGFREDMIKR----- 60
+++ +A R SN +S A I+ +G+ IG+ +IV ++V+ GF+ ++ +
Sbjct: 3 WKLFIARRIYRSNEGGKEVSKPAVRIAMLGIAIGLAVMIVSVAVVIGFKHEVRDKVVGLG 62
Query: 61 --VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
++ N + P+V + + L + V V + + + S VL
Sbjct: 63 SDIVITNFDSQQSYQTVPIVANDSLLHLLKTLEGVKHVQRYSTKPGMIMTDDSFQGMVLK 122
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
D+ +L+N V +D V++ + +A L + +GDKI +V
Sbjct: 123 GVSHEYDWRFLKNHLQEGEIPVFSDTASTNKVLVSRTIADKLHLKLGDKIYTYYIEDNV- 181
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAI 237
R++ TV G+++ F YD+ + L + VSG+E+ V + +
Sbjct: 182 ------RARRLTVAGIYQTNFSAYDDLFLITDLYTVNRLNGWQKGQVSGMELEVNEYSRL 235
Query: 238 EKTHENIV-------RILGNGVVVIDWQQRYQIFFSCY 268
E E I G ++ F+
Sbjct: 236 EPVKEEIRARVDTQVDAYGGTYYTQTVEEVNPQIFAWL 273
>gi|325281801|ref|YP_004254343.1| hypothetical protein Odosp_3204 [Odoribacter splanchnicus DSM
20712]
gi|324313610|gb|ADY34163.1| protein of unknown function DUF214 [Odoribacter splanchnicus DSM
20712]
Length = 411
Score = 76.0 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/270 (12%), Positives = 80/270 (29%), Gaps = 6/270 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
E+ +A R L + A I+ G+ +GV +++ + ++ GF+ ++ ++ G
Sbjct: 1 MNLELFIARRLLKGKQNGAVSVPIVKIALAGIALGVCVMLLSILIITGFKNEITTKLSGF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H+ I + D + +V++ + + +
Sbjct: 61 MAHLSITAYDHEDAYSGSEIELNDSLLEVVRRVSDLKQMYAYVTKPAILKSKEEIHGIIL 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
S + ++ +
Sbjct: 121 KGMDSSYDASFYRKHLREGEYPDFFQAEPSREVLISVAVAAILNVSPGDKITAHFVQDPP 180
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHEN 243
R++ +TV G++ F +YD + ++ Q N VSGI V + D I +
Sbjct: 181 RARVFTVKGIYDTGFKEYDEMLAVCDIRHLQKLNNWAPREVSGIAVELNDMKRILEVEAE 240
Query: 244 IVRILGNG-----VVVIDWQQRYQIFFSCY 268
+ L + ++ F
Sbjct: 241 LDDTLPMNQDDDFYKITTLRETAPQVFDWL 270
>gi|15805514|ref|NP_294210.1| hypothetical protein DR_0487 [Deinococcus radiodurans R1]
gi|6458175|gb|AAF10066.1|AE001908_1 conserved hypothetical protein [Deinococcus radiodurans R1]
Length = 395
Score = 76.0 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 41/265 (15%), Positives = 82/265 (30%), Gaps = 19/265 (7%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
F ++A +L R ++ +G+ +GVM LI +S+ NGF ++ L +
Sbjct: 13 FSWLLARAHLGRRRTQN------LLTVLGIAVGVMVLIAALSLTNGFSGALVDATLRASP 66
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
H+ + I +V F A L+ G+ +
Sbjct: 67 HLSLNSYTARPPSPDLE----RLIRSDRRVEAFTPFLADKGLLTRPAEQGRDAGVDFATL 122
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ + ++ + + G+ L + + V + R
Sbjct: 123 FGVTPAAAQVLQLPPAESRTLAALGPGQVL----LGAALARSVGAFTGDTVRLLNSQQRR 178
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
V G+F D+ + SL Q N V+G ++ + DP+ + +
Sbjct: 179 TELKVAGVFTTGNYLIDSAYAFTSLGTLQGLQQTGN-VTGYQLRLHDPEQAREVGMALTG 237
Query: 247 ILGNGVVVIDWQQRYQIFFS--CYE 269
+ WQ Y +
Sbjct: 238 --SQPYAALPWQDIYGTLLDQLALQ 260
>gi|302346537|ref|YP_003814835.1| efflux ABC transporter, permease protein [Prevotella melaninogenica
ATCC 25845]
gi|302151226|gb|ADK97487.1| efflux ABC transporter, permease protein [Prevotella melaninogenica
ATCC 25845]
Length = 415
Score = 76.0 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 42/274 (15%), Positives = 93/274 (33%), Gaps = 10/274 (3%)
Query: 5 SRFEVIVAWR-YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ + +A + Y ++ A I+ IGV IG+ +IV + V+ GF+ + +++G
Sbjct: 1 MNYPLFIARKIYNGGDKTRKVSKPAITIATIGVAIGLAVMIVSVCVVLGFKHTIRDKMVG 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSG-QAFVSGLSSGGSGVLVRGIS 122
H+ + Q+ D + +K +P V Q + + G+
Sbjct: 61 FGSHITVANFLTLQGSEQYPIAVNDSLIKELKAVPGVKHVQRYAYTQGILKTDNDFLGVM 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
++ V + L + I+ + +
Sbjct: 121 LKGVGPDFDTTFIHNNMVEGSLPHFSATENQQKLVISKTIADKLNLKVGQRLFAYFINDQ 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
G+R++ +T+ G++ +D+ + + L A E + SG+E+ V D +
Sbjct: 181 GVRTRKFTIAGIYETNMKQFDSQICFTDLYTANKLNGWEADQCSGVELLVNDFSQLNNIT 240
Query: 242 ENIVRI-------LGNGVVVIDWQQRYQIFFSCY 268
++ G + + FS
Sbjct: 241 LRVLNKVKNTTDHYGETYSAENIIDQNPQIFSWL 274
>gi|288928403|ref|ZP_06422250.1| membrane protein [Prevotella sp. oral taxon 317 str. F0108]
gi|288331237|gb|EFC69821.1| membrane protein [Prevotella sp. oral taxon 317 str. F0108]
Length = 415
Score = 76.0 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 46/274 (16%), Positives = 97/274 (35%), Gaps = 10/274 (3%)
Query: 5 SRFEVIVAWR-YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+A R Y + K A I+ GV +G+ ++V +SV+ GF+ + +V+G
Sbjct: 1 MNLPFFLAKRIYTNNTDKTRVDRPAIRIAIAGVAVGLAVMLVSVSVVFGFKHTIRNKVVG 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSG-QAFVSGLSSGGSGVLVRGIS 122
H+ + Q+ D + V++ +P V Q F + G++
Sbjct: 61 FGSHIQVANFMTLQASEQYPIQMGDSMLKVLRAIPGVRHVQRFAIKQGILKTNNDFLGVA 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ V+ + + + + I+ + +
Sbjct: 121 FKGIAADYDTTFIHQNLVAGAIPHFSDSVGKQQVVISQAIADQLNLKLGDKVFAYFIDNT 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
G++++ ++V +++ YD ++ L A E + SG E+ V D D ++ T
Sbjct: 181 GVKARRFSVAAIYQTNLSQYDKVTCFIDLYTAVKLNAWECDQASGAELTVDDFDRLDDTA 240
Query: 242 ENIVRI-------LGNGVVVIDWQQRYQIFFSCY 268
+V G Q+ FS
Sbjct: 241 ARVVNKVNRTIDRYGETYSSQTIQEMNPQIFSWL 274
>gi|224823952|ref|ZP_03697060.1| protein of unknown function DUF214 [Lutiella nitroferrum 2002]
gi|224603371|gb|EEG09546.1| protein of unknown function DUF214 [Lutiella nitroferrum 2002]
Length = 414
Score = 75.6 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 38/283 (13%), Positives = 88/283 (31%), Gaps = 26/283 (9%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
V +A +L S R+ + +S G+ +GV + V ++M G +D ++R++
Sbjct: 1 MNLAVSIALSHLLSRRRQ------TLVSLAGIGLGVAFFLAVSALMRGSEQDFMRRLVDN 54
Query: 65 NGHVVIQQKYY------------------PLVDYQFIANRLDFIPDVIKVLPFVSGQAFV 106
+ H+ + ++ V + + + + + G
Sbjct: 55 SAHITVYDEFRLAKPQAAELAAAHGAVEIHGVKPETEVRGIRQYKQKLDFVSRLPGLRVA 114
Query: 107 SGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGD 166
L + + ++ + + F G + D + +
Sbjct: 115 PVLLGQAIFTFAGKDLGAAINGVEPDLMKNVSTIDQYFVSGSLASLHSDPDGIIIGTGLA 174
Query: 167 KINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSG 226
++ + ++ +FR YD G ++ L+ AQ N +
Sbjct: 175 DKFRAKLGDKISVTSPTGLVRVMKIVALFRTGTASYDEGQTFIILKRAQTLLGRPNVANR 234
Query: 227 IEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + DP I R LG WQ+ + + +
Sbjct: 235 FILKLDDPARAPVVAGQIERALG--YKSQSWQEASEDIMNLVK 275
>gi|237808115|ref|YP_002892555.1| hypothetical protein Tola_1354 [Tolumonas auensis DSM 9187]
gi|237500376|gb|ACQ92969.1| protein of unknown function DUF214 [Tolumonas auensis DSM 9187]
Length = 414
Score = 75.6 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 38/282 (13%), Positives = 89/282 (31%), Gaps = 26/282 (9%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+A +L S R+ + +S +G+ +GV + + +M G +D I+R++
Sbjct: 1 MNLATSIALSHLMSRRRQ------TIVSVLGISLGVAFFLAISGLMRGSEQDFIQRLVDN 54
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSG--------- 115
+ H+ + +Y D + ++ + P +
Sbjct: 55 SPHITVYDEYRHPRLQPVEIVYPDSVYELHGIQPRTEIKGIRQYKEKLARIALRTDLQIA 114
Query: 116 ---------VLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGD 166
+ S ++ + +++ F G + + + +
Sbjct: 115 PVLQGQVILSYAGMTRGATISGVEPELMKNVSSLTKYFINGSLESLSANPNGVIIGAGLA 174
Query: 167 KINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSG 226
+ L +T + ++ +FR +YD+ +Y L Q N +
Sbjct: 175 EKFQLQMGDKLTITSSSGSVRLMKIVAVFRTGTSNYDDRQIYALLNRVQNLLEQPNIANM 234
Query: 227 IEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + + DP I + LG WQ+ + S
Sbjct: 235 LIIRLNDPALAPTVAHQIEQDLG--YKTQSWQEASEDLMSMV 274
>gi|315224989|ref|ZP_07866808.1| ABC superfamily ATP binding cassette transporter, permease protein
[Capnocytophaga ochracea F0287]
gi|314945102|gb|EFS97132.1| ABC superfamily ATP binding cassette transporter, permease protein
[Capnocytophaga ochracea F0287]
Length = 384
Score = 75.6 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 42/258 (16%), Positives = 86/258 (33%), Gaps = 3/258 (1%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH-VVIQQKY 74
+F+ I+I + ++ V++G AL +V++ G + + + V +
Sbjct: 1 MFAKSSQNVINIINRVTAFVVVLGGAALFIVLAGFAGLKNFTLSFSSTFDPDLKVFPKTG 60
Query: 75 YPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFS 134
L +L + V + Q F++ + + +S
Sbjct: 61 KYLSLTNQDTLKLSQLSSVAHFTKVLEEQVFLTHNQKNHIAYIKGVDAEYPKVNDVDSIL 120
Query: 135 RFYGNVSNDFDRGKGVIIGKDLARNL-GISIGDKINILSPYGDVTPMGMGIRSKSYTVLG 193
+ G I +L NL S +I + ++++V+
Sbjct: 121 VLGNWELSPPSVIVGATIFNNLGLNLLDGSSPLQIVVPKAGKGSILNDPMPYRQAFSVVQ 180
Query: 194 MFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHENIVRILGNGV 252
+ D V+ SL EAQ L + VS IEV + ++ E + ++ V
Sbjct: 181 GIYQLTEELDKKYVFSSLDEAQFLLGLSKGQVSAIEVKLAPNADEKQVAEQLSQLFQEPV 240
Query: 253 VVIDWQQRYQIFFSCYES 270
VV + Q + +
Sbjct: 241 VVKNRVQLNDALYRMLNT 258
>gi|257457834|ref|ZP_05622993.1| putative lipoprotein releasing system, permease protein [Treponema
vincentii ATCC 35580]
gi|257444547|gb|EEV19631.1| putative lipoprotein releasing system, permease protein [Treponema
vincentii ATCC 35580]
Length = 450
Score = 75.6 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 47/286 (16%), Positives = 105/286 (36%), Gaps = 18/286 (6%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISI-ASFI-SFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+ +A RYL N + + S I + G+ I ++ L++V+ V +G + + R
Sbjct: 1 MNFLLAWKLALRYLGLNAGQSLSNARKSLIGAIWGIGISIIPLVIVLVVSDGMIQGITSR 60
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV---- 116
++ + + P A + Q ++G G
Sbjct: 61 MIELGSGHIQILDLRPAPRSSQTAEERKRSAQAAFDSISENAQYVITGSRQQQEGTGLLI 120
Query: 117 ---------LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK 167
+ + L + + D D + +++GK +A N G+ +GD
Sbjct: 121 GKTGRRGGTIRAIEAGYFADNLPARNLLTVVDGTLDPDDDRSILLGKKIAENTGLKVGDS 180
Query: 168 INILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGI 227
++L+ + + + V G+ + + D +++ L A + +++V +
Sbjct: 181 CSLLTLLPQYSGNKTRPKLTRFKVAGILSSGYQELDALWIFIPLAAADAVLSPQSSVRSL 240
Query: 228 EVFVKDPDA---IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
V + DP + + E I ++L G V WQ + F +++
Sbjct: 241 TVSIADPFNEALLAEAKEAIQQLLPAGFSVYTWQDLNRSQFYSFQT 286
>gi|194333394|ref|YP_002015254.1| hypothetical protein Paes_0551 [Prosthecochloris aestuarii DSM 271]
gi|194311212|gb|ACF45607.1| protein of unknown function DUF214 [Prosthecochloris aestuarii DSM
271]
Length = 422
Score = 75.6 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 43/285 (15%), Positives = 83/285 (29%), Gaps = 32/285 (11%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M+ F E +AW +L ++ S ++ +GV +G LI ++V NG +++I +
Sbjct: 1 MTFFD--EFKIAWVHLRERKRQ------SLLTALGVAVGSAMLITTIAVANGSTQNVINK 52
Query: 61 VLGINGHVVIQ---------------------QKYYPLVDYQFIANRLDFIPDVIKVLPF 99
++ I HV++ + +
Sbjct: 53 IIDIAPHVIVSAEQITPLLPDNLIGYGQERLAMVEKNVTTRDKETIKNYPDVVSRIAALG 112
Query: 100 VSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARN 159
A S R L S + + +
Sbjct: 113 TVEVAAPYVTSKMIVRNKSRFTPCIAKGVLPAEESGIANLRGKLLEPNALQELDYTPSGI 172
Query: 160 LGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFN 219
+ + + + + G V+G F F D Y++L AQ
Sbjct: 173 ILGDQLAEKLKAGYHSRLVLISQGSEEYPVIVVGRFSTGFNAKDEREAYINLSLAQRIEG 232
Query: 220 L-ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQI 263
+ NAV+GI + D + I + +G W + +
Sbjct: 233 IASNAVTGIGIRTSDVSRAGEVATQIESL--SGYGAESWDETNKN 275
>gi|20090527|ref|NP_616602.1| hypothetical protein MA1674 [Methanosarcina acetivorans C2A]
gi|19915553|gb|AAM05082.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 389
Score = 75.2 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 103/267 (38%), Gaps = 21/267 (7%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+E+ +A R + S +K +I + + + V+M++++GF+++++ + N
Sbjct: 2 YELKIALRQVLSRKKQTLFAILAVALAV------AVITVMMAMLSGFQDELVSSSIENNP 55
Query: 67 HVVIQQKY---YPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
H+VI + + Y+ + + VI V P GQ + + L
Sbjct: 56 HIVITPQDEKEEFIHLYRHTSALIAEKEGVIAVSPKYLGQVALEYRDNAEGVSLQGVDPV 115
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
++ + ++ S G+ G+++G LA NL + +GD+++ + P
Sbjct: 116 AEENVMRVSEDVVEGDFMTLVHTRDGILLGDKLAENLEVHVGDRVDAVFPGSKT------ 169
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ + D Y L Q +F+ VS I V V DP E +
Sbjct: 170 ----TSFKVIGLIHTGTSADEVTAYARLDSVQDFFDEPGVVSNIGVRVADPYQAEAIAAS 225
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYES 270
I G+ + W + + ++
Sbjct: 226 IEEE--TGLDAVSWSEANAEILNLLDT 250
>gi|145219681|ref|YP_001130390.1| hypothetical protein Cvib_0873 [Prosthecochloris vibrioformis DSM
265]
gi|145205845|gb|ABP36888.1| protein of unknown function DUF214 [Chlorobium phaeovibrioides DSM
265]
Length = 422
Score = 75.2 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 48/275 (17%), Positives = 93/275 (33%), Gaps = 9/275 (3%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F R + +A R+ F+ ++ I+ S ISF G++IGV L+VVMSV+NGF++ L
Sbjct: 5 FDRPSLWIARRFSFAPKRFRIINAISAISFAGIVIGVCTLLVVMSVLNGFQKLASDLFLT 64
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
++ V + + P + + V V ++G+S
Sbjct: 65 LDSPVQMISEDSPGFMVNSELLESLRRIEGVASAEPYLEGEAVLAGKGKNELVTLKGLSP 124
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK----INILSPYGDVTP 179
L R S G + + I I
Sbjct: 125 LAEQRLMRVTGRQTPLFSTPASISAGEFLAYRTGLYQNSIVNLFSPELIRISLASLSQPY 184
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+ +R +V F ++ D ++ + ++ + SGI++ + + ++
Sbjct: 185 ILSALRIAEVSVSSTFTLQKLFDDRFVLSSNALAREVLLLGRSEYSGIDIRPRKGVSEKE 244
Query: 240 THENIV-----RILGNGVVVIDWQQRYQIFFSCYE 269
+ G ++Y+ FS E
Sbjct: 245 LAARLTEWQSLNQQPEGTRFRTLAEKYRDIFSVME 279
>gi|189346758|ref|YP_001943287.1| hypothetical protein Clim_1241 [Chlorobium limicola DSM 245]
gi|189340905|gb|ACD90308.1| protein of unknown function DUF214 [Chlorobium limicola DSM 245]
Length = 416
Score = 75.2 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 38/273 (13%), Positives = 99/273 (36%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ +A R+ F+ ++ I++ S IS G+++GV L++VMSV+NGF++ +
Sbjct: 1 MKTAFWIARRFSFARKRFRIINVISAISLAGIIVGVSTLLIVMSVLNGFQKLALDMFTTF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
G V + + ++ + + + V++RG+S +
Sbjct: 61 EGPVQLVSRNGDPIEVSDSLLASIASVRGVASAEPFAEGEAIMSGGEKSELVMIRGLSAT 120
Query: 125 DFSYL---QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
L + ++ + + + + + I + M
Sbjct: 121 AHRELMRKTGTVQPYFSGETVSSGILLAERMKLSPFHEIKLFSPELITLGLEMLSEPYML 180
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
++ V F ++ D ++ + + ++ SGI++ + + +
Sbjct: 181 AALKIPETKVASRFTLQKIFDDRYVLAPNNFARNVLLLGGSSYSGIDIRAEAGVSGPELK 240
Query: 242 ENIVR-ILGNGVV----VIDWQQRYQIFFSCYE 269
+ + R +L + + + + +Y F+ E
Sbjct: 241 KRLDRWLLASPLRKSSTLRTLESKYGDIFAVME 273
>gi|330995654|ref|ZP_08319552.1| efflux ABC transporter, permease protein [Paraprevotella
xylaniphila YIT 11841]
gi|329574713|gb|EGG56274.1| efflux ABC transporter, permease protein [Paraprevotella
xylaniphila YIT 11841]
Length = 414
Score = 75.2 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 44/274 (16%), Positives = 99/274 (36%), Gaps = 11/274 (4%)
Query: 5 SRFEVIVAWRYLFSNRK-NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F + +A + + A I+ GV +G+ +++ + V+ GF++++ +V+G
Sbjct: 1 MNFNLFIARKLFREHGDVKKVSRPAILIATSGVAVGLAVMVISVCVVLGFKQEISSKVVG 60
Query: 64 INGHVVIQQK-YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H+ IQ Q IA + +V V Q F + + +GI
Sbjct: 61 FGSHIQIQNYASVTTNSPQPIAIPSALMKEVGDVEGVAHVQRFCNKEGILKTDADFKGIL 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
++ + + + + I+ + +
Sbjct: 121 LHGVGVEFDTSFLKAHMEEGELPSFSDTVASNRIVISRQIADELHLEV-GSKVFAYFFEN 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLENAVSGIEVFVKDPDAIEKTH 241
+R++ +TV G++ ++D +V+ + + SG+E+ VKD D +++
Sbjct: 180 SVRTRRFTVSGIYCTHLTEFDKALVFTDIYTCNRLNAWAPDQYSGMEIAVKDLDRVDEVA 239
Query: 242 ENIVR-------ILGNGVVVIDWQQRYQIFFSCY 268
+V+ G V + Q+ Y F+
Sbjct: 240 SVLVKRMNRETDAYGGSYVAMTIQELYPQIFAWL 273
>gi|73670883|ref|YP_306898.1| hypothetical protein Mbar_A3445 [Methanosarcina barkeri str.
Fusaro]
gi|72398045|gb|AAZ72318.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
Length = 389
Score = 75.2 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 106/267 (39%), Gaps = 21/267 (7%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+E+ +A R +FS ++ F +I + + + V+M++++GF+ ++IK +
Sbjct: 2 YELKIALRQVFSRKRQTFFAILAVALAV------AVITVMMAMLSGFQGELIKSSTENSP 55
Query: 67 HVVIQQKYY---PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
H+VI + + Y+ + + VI V P GQA + + + L
Sbjct: 56 HIVINPQDEKDGFIHLYKSNSALIMEKEGVIAVSPKYLGQAALEYKDNAEAISLQGIEPE 115
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
++ ++ S G+ + G+++G LA NLG+ GD+++ + P
Sbjct: 116 AEDKVMRVSKDMIEGSFLSLTHTRHGIVLGDKLAENLGVQPGDRVDAVFPGSKT------ 169
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ + + D Y L Q +FN VS I V V DP + +
Sbjct: 170 ----TSFKVIGLIHTGTEADEVTAYARLDSVQDFFNEPGVVSTIGVRVSDPYQADIIASS 225
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYES 270
I R + + W + + +
Sbjct: 226 IERE--TELNAVSWIEANAEILNLLNT 250
>gi|218960485|ref|YP_001740260.1| hypothetical protein; putative membrane protein [Candidatus
Cloacamonas acidaminovorans]
gi|167729142|emb|CAO80053.1| hypothetical protein; putative membrane protein [Candidatus
Cloacamonas acidaminovorans]
Length = 418
Score = 75.2 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 56/278 (20%), Positives = 104/278 (37%), Gaps = 14/278 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ ++ V +A +YL + I A ++ IG+ +GV++L+ V SVMNGFR D+ R+
Sbjct: 1 MINKSVVFLARKYLSGRKTRG-IGKAHYLCLIGITLGVLSLLCVTSVMNGFRFDIRNRIT 59
Query: 63 ----------GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSG 112
+ + + +++ V G+
Sbjct: 60 GTFAEIRISAKGGETIKGYSAICNQLQDMKFSASPVIRNELLLKYDSVVLPTLCFGIEPN 119
Query: 113 GSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILS 172
+ + D + GN+S + G+ +G LA LG+ +GD+I +LS
Sbjct: 120 RHKNVSSLLQKPDTGSKEIIQGLLVGNISPEEFSASGIALGAGLASQLGVYLGDEIQVLS 179
Query: 173 PYGDVTP-MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVF 230
P +V GM R + V +F P+YD +M + A + + IEV
Sbjct: 180 PMFNVPTAFGMIPRIRFLKVQAIFAAGMPEYDQNFSFMGIDNAVFFASYSPGEADYIEVK 239
Query: 231 VKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + + + + + DW +S
Sbjct: 240 PFSQMRKNQPLKTLKKAFPD-FQIEDWSSFDPNLYSAI 276
>gi|218130184|ref|ZP_03458988.1| hypothetical protein BACEGG_01772 [Bacteroides eggerthii DSM 20697]
gi|317476677|ref|ZP_07935921.1| hypothetical protein HMPREF1016_02905 [Bacteroides eggerthii
1_2_48FAA]
gi|217987688|gb|EEC54016.1| hypothetical protein BACEGG_01772 [Bacteroides eggerthii DSM 20697]
gi|316907140|gb|EFV28850.1| hypothetical protein HMPREF1016_02905 [Bacteroides eggerthii
1_2_48FAA]
Length = 414
Score = 74.8 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 52/277 (18%), Positives = 103/277 (37%), Gaps = 21/277 (7%)
Query: 7 FEVIVAWRYLFSNRKNAFIS-IASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
+A R ++ +S A I+ +G+ IG+ +I+ +SV+ GF+ ++ +++G
Sbjct: 3 LSRFLALRIYRNSDAEKKVSRPAVLIATLGIAIGLAVMIIAVSVIIGFKSEVRDKIIGFG 62
Query: 66 GHVV-------IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
H+ + P+ + L P+V V + + + + VL
Sbjct: 63 SHIQISNSDAARSFETRPIAVTDSMIAVLTDNPEVKHVQRYSTKPGMIKTADAFQGMVLK 122
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
S+ + +D V+I K +A + + +GDKI+ DV
Sbjct: 123 GIGPEYATSFFRRHLVEGEFPQFSDSASTNRVVISKVIADKMKLKLGDKIDTYYIQDDVR 182
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+ + T + F D MV +L + VSG+E+ + D D +E
Sbjct: 183 ARRLTVVGIYQTNFSEYDNLFLLTDLCMV------NRLNKWQPDQVSGLELELYDYDKLE 236
Query: 239 KTHENIVRILGN-------GVVVIDWQQRYQIFFSCY 268
+ I +G V++ +Q F+
Sbjct: 237 EATYQIADEIGQSPDPYGADYCVLNVEQLNPQVFAWL 273
>gi|221134654|ref|ZP_03560957.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Glaciecola sp. HTCC2999]
Length = 381
Score = 74.8 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/242 (18%), Positives = 92/242 (38%), Gaps = 11/242 (4%)
Query: 36 VMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIK 95
+ +GV ALIVV+SVMNG + + +R+LG+ H+VI P I + L
Sbjct: 1 MGLGVAALIVVLSVMNGLEDQLKQRILGVVPHIVIPHASLPQPISHPITDSLSAAQRETI 60
Query: 96 VLPF--VSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIG 153
V + QA + + + + ++S R V+IG
Sbjct: 61 VASMPFIERQALIQSSQGLSGVSVQGIDPKIMKMASTLNDHFVFNDLSGLQARQYHVVIG 120
Query: 154 KDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQE 213
LAR L + +GD + I+ P + ++ ++ D+ ++M +++
Sbjct: 121 YALARKLNVQVGDTLRIILPSSSRFTPFGRVPAQRNVIVSGVFSLQSVEDSQTLFMHIED 180
Query: 214 AQLYFNLENAVSGI------EVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSC 267
++ + F+ DP + + + ++ G+ W+++ F
Sbjct: 181 LHRLARIKYQSDVLHSSDSTRWFINDPFSYGQISTALDQL---GISHTSWREKQGPLFDA 237
Query: 268 YE 269
+
Sbjct: 238 VK 239
>gi|260912318|ref|ZP_05918869.1| ABC superfamily ATP binding cassette transporter permease protein
[Prevotella sp. oral taxon 472 str. F0295]
gi|260633619|gb|EEX51758.1| ABC superfamily ATP binding cassette transporter permease protein
[Prevotella sp. oral taxon 472 str. F0295]
Length = 415
Score = 74.8 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 47/274 (17%), Positives = 96/274 (35%), Gaps = 10/274 (3%)
Query: 5 SRFEVIVAWR-YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+A R Y + K A I+ GV +G+ ++V +SV+ GF+ + +V+G
Sbjct: 1 MNLPFFLAKRIYTNNTDKTRVDRPAIRIAIAGVAVGLAVMLVSVSVVFGFKHTIRNKVVG 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSG-QAFVSGLSSGGSGVLVRGIS 122
H+ + Q+ D + V++ +P V Q F + G++
Sbjct: 61 FGSHIQVANFMTLQASEQYPIQMGDSMLRVLRAIPGVRNVQRFAMKQGILKTNNDFLGVA 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ ++ V+ + + + I+ + +
Sbjct: 121 FKGIAADYDTTFIHQNLVAGAIPHFSDSAGKQQVVISQAIADQLNLKLGDKVFAYFIDNT 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
G++++ +TV +++ YD ++ A E + SG E+ VKD D + +T
Sbjct: 181 GVKARRFTVAAIYQTNLSQYDKVTCFIDFYTAVKLNAWETDQASGAELTVKDFDRLGETA 240
Query: 242 ENIVRI-------LGNGVVVIDWQQRYQIFFSCY 268
+V G Q+ FS
Sbjct: 241 ARVVNKVNRTIDRYGETYSSQTIQEMNPQIFSWL 274
>gi|154248147|ref|YP_001419105.1| hypothetical protein Xaut_4227 [Xanthobacter autotrophicus Py2]
gi|154162232|gb|ABS69448.1| protein of unknown function DUF214 [Xanthobacter autotrophicus Py2]
Length = 408
Score = 74.8 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 50/281 (17%), Positives = 95/281 (33%), Gaps = 21/281 (7%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M+ + FE I A R+L R + G+ IGV ++ + +++ G + + IKR
Sbjct: 1 MNRWLPFEWIAALRFLGEGRMQ------TAFILGGITIGVGVIVFMSAMLAGLQTNFIKR 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLD----FIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
VL + + +F ++ P + V+ + V
Sbjct: 55 VLTSQPQIQLLPPEEVARPLRFDPGVIEGALVQKPSQRILSIDQWQSIAVAMRARPDVVV 114
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
+ S S + ++ + V + L D I + +
Sbjct: 115 VAPTASGSALAVRGDASRSISITGMEPEQYFRIVRVPDYLVAGEARLGTDDILVGTELAK 174
Query: 177 VTPMGMGIR---------SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGI 227
G+G + + T+ G+F + Y++L+ AQ NL V+ I
Sbjct: 175 DLGAGVGDKLNVTTANGSGRILTITGIFDFGNKAANGRNTYVALRTAQSLLNLIGGVTTI 234
Query: 228 EVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
++ V D A E +I ++ V W FF+
Sbjct: 235 DMTVTDTYAAEDIARDIAAVVP--VEADSWITTNAQFFTAV 273
>gi|298386060|ref|ZP_06995617.1| membrane protein [Bacteroides sp. 1_1_14]
gi|298261288|gb|EFI04155.1| membrane protein [Bacteroides sp. 1_1_14]
Length = 377
Score = 74.8 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/242 (16%), Positives = 85/242 (35%), Gaps = 8/242 (3%)
Query: 36 VMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIK 95
+ + +AL+ +SV NGF++ + + + I + + D Q R +
Sbjct: 1 MALATLALVCTLSVFNGFQDMVASFFTAFDPQLKITIREGKVFDGQDEKIRAVCALPDVS 60
Query: 96 VLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKG---VII 152
V + + + V+++G+ ++ + + D + +
Sbjct: 61 VSTETLEENAMVQYKDRQAMVVLKGVEDNFEDLTEIDSILYGAGEFILHDSIVNYGVMGV 120
Query: 153 GKDLARNLGISIGDKINILSPYGDV-----TPMGMGIRSKSYTVLGMFRMRFPDYDNGMV 207
G++ D + + P + P R Y+ +F + YD +
Sbjct: 121 ELVSTLGTGLAFVDPLQVYLPKRNAKVNMANPGASFNRDYLYSPGVVFVVNQQKYDESYI 180
Query: 208 YMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSC 267
SL + + VSGIE+ +K I I ++LG+ VV + Q+ F
Sbjct: 181 LTSLDFLRNLLDYTTEVSGIELKLKPNANISSVQSKIEKMLGDDFVVQNRYQQQADVFRI 240
Query: 268 YE 269
E
Sbjct: 241 ME 242
>gi|167752426|ref|ZP_02424553.1| hypothetical protein ALIPUT_00670 [Alistipes putredinis DSM 17216]
gi|167660667|gb|EDS04797.1| hypothetical protein ALIPUT_00670 [Alistipes putredinis DSM 17216]
Length = 426
Score = 74.8 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 50/280 (17%), Positives = 110/280 (39%), Gaps = 21/280 (7%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
E+ +A R + N + I+ + V + V +I+ ++V+ GF+ ++ RV G +
Sbjct: 13 NLELFIARRIARNGPGNR-PGVMVRIAVVAVALSVTVMILALAVIMGFKREITDRVTGFS 71
Query: 66 GHVVI-------QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
V + + P+ + + + +V+++ P+ V + +L
Sbjct: 72 AQVEVADLRSAGSIESVPVPRSEQLERAIRSAGEVVRLAPYAVKGGVVKTPDAILGVMLK 131
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
D+S+ ++ D R K ++I + +AR +G+ GDK+ +L +
Sbjct: 132 GVDGGYDWSFFRDHLLEGELPRVGDSIRTKEILISRSVAREMGLVPGDKVEMLFVESEK- 190
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAI 237
R + V G++ ++D + L+ Q + + VSG EV + D
Sbjct: 191 ----SPRRDRFKVSGIYATGMDEFDRSVAMTDLRNVQRLADWSSDEVSGYEVTLADFSQA 246
Query: 238 EKTHENIVRILGN-------GVVVIDWQQRYQIFFSCYES 270
E + +L + + Q+R+ F ++
Sbjct: 247 EDFSRRLNDMLLDSDREAFWDLTARSAQERFPTVFDWLKT 286
>gi|198277393|ref|ZP_03209924.1| hypothetical protein BACPLE_03605 [Bacteroides plebeius DSM 17135]
gi|198269891|gb|EDY94161.1| hypothetical protein BACPLE_03605 [Bacteroides plebeius DSM 17135]
Length = 387
Score = 74.8 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/250 (15%), Positives = 80/250 (32%), Gaps = 8/250 (3%)
Query: 28 ASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRL 87
S IS GV + +AL+ +SV NGF++ + + + I + D Q
Sbjct: 2 ISGISVCGVALATLALVCTLSVFNGFQDLVSNLFTAFDPELKIVPTTGKVFDGQDKDIAA 61
Query: 88 DFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDF--- 144
+ ++ + + +++G+ ++ F
Sbjct: 62 IRKMPEVALVSESLEDNALVQYQGRQAMAVIKGVEDNFEELTPIDTILFGRGELLLHDEV 121
Query: 145 --DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS---KSYTVLGMFRMRF 199
GV + L + ++ V ++ +F +
Sbjct: 122 VDYAIPGVQLLATLGTGIRFLDPLEVYAPKRGAKVNMANPAASFTGGNLFSSGLVFAVNQ 181
Query: 200 PDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQ 259
YD + SL+ A+ F VS I + +K+ I+ + + LG V+D +
Sbjct: 182 EKYDGSYILTSLKFARQLFQYTTEVSAINLKMKEGTDIDAFKRKLEKHLGERFRVLDRYE 241
Query: 260 RYQIFFSCYE 269
+ F +
Sbjct: 242 QQADTFRIMK 251
>gi|163782460|ref|ZP_02177458.1| hypothetical protein HG1285_06720 [Hydrogenivirga sp. 128-5-R1-1]
gi|159882493|gb|EDP75999.1| hypothetical protein HG1285_06720 [Hydrogenivirga sp. 128-5-R1-1]
Length = 414
Score = 74.4 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 48/278 (17%), Positives = 95/278 (34%), Gaps = 29/278 (10%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
V+ + + R+ + +S +GV IG+ A +V+ S+M GF++ IK+V+ ++ H+
Sbjct: 2 FVSLKLILQRRRQ------TVVSTLGVAIGMAAFVVMSSLMLGFQKHFIKQVIDLDAHIS 55
Query: 70 IQQKYYPLVDYQFIANRLDFI-----------------PDVIKVLPFVSGQAFVSGLSSG 112
I+ K+ + + + F S + +
Sbjct: 56 IKPKFNYDEKRILSRVFDEDVIVEVLGSKPKEVRDKLGDYRRIIEEFSSLEGILGMSPHL 115
Query: 113 GSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGIS----IGDKI 168
+VR L G ++ + + R GI + +
Sbjct: 116 RGNAIVRFGPKDVPVNLFGIDPNLEGRATSVERYLEKGNLDSLKVRRNGIILGKLVARDL 175
Query: 169 NILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIE 228
+ V + S+ + V+ F D Y+ ++ Q ++ N V+ +
Sbjct: 176 GVRETGKKVILISPRGTSQVFEVVDFFNSGITTIDKSRAYIHIRAMQKLYDRPNEVNELV 235
Query: 229 VFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFS 266
V VKD D +I G+ WQ+ Y F
Sbjct: 236 VRVKDVDEAVSIARHIEARTGHD--AQSWQEAYSNFLQ 271
>gi|313206041|ref|YP_004045218.1| hypothetical protein Riean_0544 [Riemerella anatipestifer DSM
15868]
gi|312445357|gb|ADQ81712.1| protein of unknown function DUF214 [Riemerella anatipestifer DSM
15868]
gi|315022354|gb|EFT35382.1| Lipoprotein releasing system transmembrane protein lolC [Riemerella
anatipestifer RA-YM]
gi|325336518|gb|ADZ12792.1| putative lipoprotein releasing system transmembrane protein
[Riemerella anatipestifer RA-GD]
Length = 400
Score = 74.4 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/272 (14%), Positives = 91/272 (33%), Gaps = 7/272 (2%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+A RYL + + + +S + ++ I +M+ V A+ +++SV +G E V
Sbjct: 1 MKNTPFYIAKRYLLAKKGSQAVSFITGLAAIAMMVAVAAMFIIVSVFSGLEELNKDLVED 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
++ + I ++ + I V + ++ G +RG+
Sbjct: 61 LHADLTITSTRGKTLENIDKITDVLGQNKSISSFSKVIEEKVYLDYNNNGEIAYIRGVD- 119
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
S ++ + + + FD +++ L L I +G + + G+
Sbjct: 120 SVYAKVNPIQNSIFFGSYLSFDYTNDIVMENGLNSRLSIPVGSDKDYAQLFMPKPGKGII 179
Query: 184 IRSKSYTVLGMFR----MRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIE 238
+ D N V ++ Q NL I + +KD
Sbjct: 180 NKESDIFNKKEVFAIGVFNGKDQLNSYVIAPIELTQELLNLPKGTAYSIVIKLKDSANAN 239
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+++ L V + ++ F+ +
Sbjct: 240 VVKKDLEGKL-THVKISTKEEENAAFWKMINT 270
>gi|325104833|ref|YP_004274487.1| protein of unknown function DUF214 [Pedobacter saltans DSM 12145]
gi|324973681|gb|ADY52665.1| protein of unknown function DUF214 [Pedobacter saltans DSM 12145]
Length = 405
Score = 74.4 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/272 (16%), Positives = 96/272 (35%), Gaps = 16/272 (5%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR---- 60
+ +A R F + F + I+ G+M+G+ +++ ++VM GF+ ++ +
Sbjct: 1 MNLGLFIAKRISF-KAERTFSKLIVRIAIAGIMLGLSVMLLSIAVMKGFKNEIRDKVRGF 59
Query: 61 ---VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVL 117
+L N + + P V +L ++ V+PF + + V
Sbjct: 60 SGDILIQNYDLNTSYENKPFVLDDSSKVKLSEDKNIRSVVPFATKPGIIKTDEEVEGVVF 119
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
D G + G+ ++I +++A L + +GD +
Sbjct: 120 KGIDETYDTESFDKILKEGRGINFKGVNSGQQIVISENMASRLNLKVGDSFLMYFVQ--- 176
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLENAVSGIEVFVKDPDA 236
+R + + ++G++ + D V L + E V G EV + D
Sbjct: 177 ----ESLRKRKFEIVGIYSTGVEEVDKTYVIGDLDLIRRLNKWKEGEVGGYEVRIGDFTQ 232
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+EK I + + + + Y F
Sbjct: 233 LEKNAYEISDKIQMSLKAVPITEMYSTIFEWL 264
>gi|320334672|ref|YP_004171383.1| hypothetical protein Deima_2075 [Deinococcus maricopensis DSM
21211]
gi|319755961|gb|ADV67718.1| protein of unknown function DUF214 [Deinococcus maricopensis DSM
21211]
Length = 389
Score = 74.4 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 46/271 (16%), Positives = 95/271 (35%), Gaps = 19/271 (7%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M+ + +A +L R I+ +G+ +G+M LI +S+ NGF ++
Sbjct: 1 MARLPSLPLTLARAHLTRRRAQN------LITMLGIAVGMMVLITALSLTNGFTRALVDA 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
L H+ +Q+ D L P V + PF++ + ++ +S V
Sbjct: 55 TLRATPHLSLQRYVPGGRDPNL-ERTLRADPRVEAIAPFLADKGLLTRPASRNRNAGVDF 113
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + +F G + K + + S + ++ +
Sbjct: 114 ATLFGVTPDAAGVLQFPGPTTQALRTLKDGEV-------ILGSALAQSIGAFSGDELRLL 166
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
R + V +F D+ +++L+ Q N ++G +V + DP+
Sbjct: 167 NSMQRRAALKVRTLFSTGNYQIDSAYAFVTLRTLQDLQGTTN-ITGYQVRLHDPEQTRAV 225
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFS--CYE 269
++V G I WQ Y+ +
Sbjct: 226 ASSVVA--GGTFSPIAWQDLYRTLLDQLALQ 254
>gi|116754228|ref|YP_843346.1| hypothetical protein Mthe_0918 [Methanosaeta thermophila PT]
gi|116665679|gb|ABK14706.1| protein of unknown function DUF214 [Methanosaeta thermophila PT]
Length = 389
Score = 74.4 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 56/270 (20%), Positives = 104/270 (38%), Gaps = 21/270 (7%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ FE I+A ++ N + +F + + V + V ++V+M +M GFRE++++ +
Sbjct: 1 MSEMFEHIIASHHIMRNPR------MAFFTVLSVALAVAIIVVMMGLMGGFREEIMRTTI 54
Query: 63 GINGHVVIQQK--YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
N HVVI+ K + Y+ ++ + P V V P + G+A V ++
Sbjct: 55 ENNPHVVIEPKEGENEIHLYRTLSAIVWTYPGVEAVSPRLKGKAVVEYRDRARGVEVLGV 114
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
I + ++ G+ + +IG LA + S GD+I ++ +
Sbjct: 115 IPTDEDPLMRVERDLIEGSFMDLELSRYSTVIGSKLAEEIRASTGDRIELIRQNRSINLE 174
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
GI D +VY+ L+ AQ + VS + V + D
Sbjct: 175 IAGIVE-----------TGTATDKTLVYIPLKTAQDILGEGDVVSEVSVRLYDLYDASYL 223
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYES 270
E I R W + + E+
Sbjct: 224 AEEINRK--TSYTARSWVDINRDMLNLLET 251
>gi|300727949|ref|ZP_07061327.1| putative membrane protein [Prevotella bryantii B14]
gi|299774791|gb|EFI71405.1| putative membrane protein [Prevotella bryantii B14]
Length = 417
Score = 74.4 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/276 (13%), Positives = 83/276 (30%), Gaps = 12/276 (4%)
Query: 5 SRFEVIVAWRYLFSNR-KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ +A + K A I+ GV IG+ +I+ + V+ GF+ + +V+G
Sbjct: 1 MNLSLFLARKIFLDKGDKRKVSRPAIHIATAGVAIGLAVMIISVCVVLGFKHTIRDKVIG 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVI---KVLPFVSGQAFVSGLSSGGSGVLVRG 120
H+ + + + Q F + G
Sbjct: 61 FGSHIQVGNFLSLQSQGTEQYPVAMNDSMMNVLKHISGIKHVQRFAYKQGLLKTNNDFLG 120
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
++ +S + + + ++ +
Sbjct: 121 VNFKGVGPEWDSTFIANSMIEGTIPHFDDKASHNKILVSKTMADKLNLKSNQKIFAYFID 180
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEK 239
G+R++ +T+ G++ YD M + L A+ E + VSG E+ V++ + +
Sbjct: 181 NNGVRARRFTICGIYETNLKKYDQIMCFCDLYTARKLNGWEDDQVSGAELQVENFEQLPI 240
Query: 240 THENIV-------RILGNGVVVIDWQQRYQIFFSCY 268
I+ G ++ F+
Sbjct: 241 VANRIIGKVNKTVDHYGETYSSSTIKEINPQIFAWL 276
>gi|4586220|emb|CAB40972.1| hypothetical protein [Porphyromonas gingivalis]
Length = 360
Score = 74.4 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/267 (13%), Positives = 94/267 (35%), Gaps = 7/267 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RYLFS ++ + +++ S +S I V + AL+ ++S+ NG+ ++
Sbjct: 1 MNFPFFIARRYLFSRKRFSAVNVVSLVSAIAVCVVSSALVCILSIFNGYEALIMTHSAVT 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ ++I+ L+ + I F+ + V + G+ +
Sbjct: 61 DPPLMIRSADNSLIKADDKTLLTALEAEGIGSYSFILTGEGLVKTKYRQQAVSLMGVDDR 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDR-----GKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
++ F G + D G I ++ G ++ + G + P
Sbjct: 121 YPRTVKIDSIVFAGTFATDTLSGATALNVGAAIATEMQLGAGFVEAVEVIVPRRIGLINP 180
Query: 180 MGMGIRSKSYT-VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN-AVSGIEVFVKDPDAI 237
+ KS + ++ + +S+ + + + + + ++
Sbjct: 181 LVPAGAFKSLQGQVASVFASGLQPEDNSIILSIDSLRKLLDYSDHEAEAVAIQLQTGSDA 240
Query: 238 EKTHENIVRILGNGVVVIDWQQRYQIF 264
E+ ++ L + V+D ++
Sbjct: 241 EQIALHLKETLRDSYQVLDLAGQHPEI 267
>gi|218961559|ref|YP_001741334.1| hypothetical protein; putative membrane protein [Candidatus
Cloacamonas acidaminovorans]
gi|167730216|emb|CAO81128.1| hypothetical protein; putative membrane protein [Candidatus
Cloacamonas acidaminovorans]
Length = 407
Score = 74.4 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/266 (11%), Positives = 91/266 (34%), Gaps = 8/266 (3%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ RYL + ++N + + +G+++ V L +++ G+ + +LG
Sbjct: 1 MDKLSTFFLTRYLKAPKRN-LLRFSFVFMILGIILSVGILSAGLNLFEGYERTLKDVLLG 59
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
H+ + + + + + + ++ ++ + +
Sbjct: 60 TFPHITLTKANLDNISNDETDSLITKLSKRDEIQQITPLLSYPVMTAGKEKVRGAILNAY 119
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+++ +G+ +I + + +++ +G+
Sbjct: 120 DFNGKQPFPQAKYIQKGKKIPAKGEVIIGKYLAKELGKDIGDTLKVVFTRLDNISALGIF 179
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK--DPDAIEKTH 241
+ G++ F + D +V ++ +A+ N + S +E+ +K D + +
Sbjct: 180 PSEYYLPIAGIYSSGFYETDRSLVLTNITDAEYMLNAKPGFSKLEIRLKSKDIEKAPEIA 239
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSC 267
+ + I+G V WQ FS
Sbjct: 240 QLLQTIVGPEYSVYPWQT-----FSA 260
>gi|297172685|gb|ADI23652.1| ABC-type transport system, involved in lipoprotein release,
permease component [uncultured Gemmatimonadales
bacterium HF4000_15H13]
Length = 243
Score = 74.4 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
R +A YL ++R +S+ ++I+ GV IGV AL++V++VM G +ED+ ++L
Sbjct: 12 RLHWFIARHYLGASRGRGLLSLITWIALGGVTIGVTALVIVIAVMTGMQEDLQGKILEST 71
Query: 66 GHVVIQ 71
HVV+
Sbjct: 72 PHVVVM 77
>gi|15639568|ref|NP_219018.1| hypothetical protein TP0580 [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189025807|ref|YP_001933579.1| hypothetical protein TPASS_0580 [Treponema pallidum subsp. pallidum
SS14]
gi|3322873|gb|AAC65554.1| conserved hypothetical integral membrane protein [Treponema
pallidum subsp. pallidum str. Nichols]
gi|189018382|gb|ACD71000.1| hypothetical integral membrane protein [Treponema pallidum subsp.
pallidum SS14]
gi|291059957|gb|ADD72692.1| lipoprotein releasing system, permease protein, putative [Treponema
pallidum subsp. pallidum str. Chicago]
Length = 429
Score = 74.4 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/255 (16%), Positives = 86/255 (33%), Gaps = 8/255 (3%)
Query: 14 RYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQK 73
R L S R + +I S +G+ G + LIV++SVMNGF++ I +L ++ V
Sbjct: 17 RRLNSVRARSANAITSLFFILGIAFGALTLIVILSVMNGFQQGFIGTILQVSSAHVRVYG 76
Query: 74 YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSF 133
V I+ + G + + V
Sbjct: 77 SVDAVKRAETLGGYQSFYPFIEAHALLQGNYYRQHGAL-VRAVPADIFHRDRLLARALPI 135
Query: 134 SRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLG 193
+ N+S G + + L+ G + + TV G
Sbjct: 136 TSGSFNLSKKHSIVLGYELARHLSVRTGDQVDT-----LALSGSDTQKIMPGWNKLTVTG 190
Query: 194 MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVV 253
+F+ + + D+ Y+ L F ++ V + + + ++ + + + + +
Sbjct: 191 IFKSGYHEVDSTFAYIPLDMGTTLFGTTPDITA-AVKLNNHERDDRYLFFLAQHIPD-LK 248
Query: 254 VIDWQQRYQIFFSCY 268
W++ + FFS
Sbjct: 249 AESWREYNRAFFSAL 263
>gi|317503302|ref|ZP_07961353.1| ABC superfamily ATP binding cassette transporter permease protein
[Prevotella salivae DSM 15606]
gi|315665581|gb|EFV05197.1| ABC superfamily ATP binding cassette transporter permease protein
[Prevotella salivae DSM 15606]
Length = 415
Score = 74.0 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 49/280 (17%), Positives = 103/280 (36%), Gaps = 22/280 (7%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASF-ISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+A R + +S + I+ GV IG+ +++ +SV+ GF+ + +V+G
Sbjct: 1 MNLPFFIAKRIYGGKTEGKQVSRPAIRIATAGVAIGLAVMLISVSVVLGFKHTIRDKVIG 60
Query: 64 INGHVVIQQKY-------YPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
H+ + YP+ + L IP + V + Q + + V
Sbjct: 61 FGSHIQVSDFMTLQTGDSYPIQMDDSMITVLKSIPGIKHVQRYALKQGILKTDNDFLGVV 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
D ++L ++ + ND ++I K +A LG+ + DKI D
Sbjct: 121 FKGVGPEYDTTFLHHNLVQGCIPRFNDTTTDNNILISKSIAAKLGVKVNDKIYSYFIDKD 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPD 235
R++ + + G+++ YD+ + L ++ +G E+ VKD +
Sbjct: 181 GI------RTRRFKIQGIYQTNLSQYDDITCFADLNTIVKLNGWHDDQATGAELIVKDFN 234
Query: 236 AIEKTHENIVRI-------LGNGVVVIDWQQRYQIFFSCY 268
++ +++ G ++ FS
Sbjct: 235 QLDNVENLVIKKVNRTLDHYGETYSSKTIRELCPQIFSWL 274
>gi|329955949|ref|ZP_08296752.1| efflux ABC transporter, permease protein [Bacteroides clarus YIT
12056]
gi|328525329|gb|EGF52379.1| efflux ABC transporter, permease protein [Bacteroides clarus YIT
12056]
Length = 414
Score = 74.0 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 53/279 (18%), Positives = 102/279 (36%), Gaps = 21/279 (7%)
Query: 5 SRFEVIVAWRYLFSNRKNAFIS-IASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+A R S+ +S A I+ +GV IG+ +I+ +SV+ GF+ ++ +++G
Sbjct: 1 MNLSRFIALRIYRSSDAGKQVSRPAVLIATVGVAIGLAVMIIAVSVIIGFKSEVRDKIIG 60
Query: 64 INGHVV-------IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
H+ + P+ + L PDV V + + + + V
Sbjct: 61 FGSHIQISNSDAARSFETRPIAVTDSMIAALADNPDVKHVQRYSTKPGMIKTSDAFQGMV 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
L S+ + +D V+I K +A + + +GDKI+ +
Sbjct: 121 LKGIGPEYGSSFFRRHLVEGEFPQFSDSASTNRVVISKAMADKMKLKLGDKIDTYYIQDE 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
V + + T + F D +V +L + VSG+E+ + D D
Sbjct: 181 VRARRLTVTGIYQTNFSEYDNLFLLTDLCLV------NRLNKWRPDQVSGVELELYDYDK 234
Query: 237 IEKTHENIVRI-------LGNGVVVIDWQQRYQIFFSCY 268
+E+ I G V++ +Q F+
Sbjct: 235 LEEATYRIADEVSRRPDPYGADYCVLNVEQLNPQIFAWL 273
>gi|253569387|ref|ZP_04846797.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|251841406|gb|EES69487.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
Length = 377
Score = 74.0 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/242 (16%), Positives = 85/242 (35%), Gaps = 8/242 (3%)
Query: 36 VMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIK 95
+ + +AL+ +SV NGF++ + + + I + + D Q R +
Sbjct: 1 MALATLALVCTLSVFNGFQDMVASFFTAFDPQLKITIREGKVFDGQDERIRAVCALPEVS 60
Query: 96 VLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKG---VII 152
V + + + V+++G+ ++ + + D + +
Sbjct: 61 VSTETLEENAMVQYKDRQAMVVLKGVEDNFEDLTEIDNILYGAGEFILHDSIVNYGVMGV 120
Query: 153 GKDLARNLGISIGDKINILSPYGDV-----TPMGMGIRSKSYTVLGMFRMRFPDYDNGMV 207
G++ D + + P + P R Y+ +F + YD +
Sbjct: 121 ELVSTLGTGLAFVDPLQVYLPKRNAKVNMANPGASFNRDYLYSPGVVFVVNQQKYDESYI 180
Query: 208 YMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSC 267
SL + + VSGIE+ +K I I ++LG+ VV + Q+ F
Sbjct: 181 LTSLDFLRNLLDYTTEVSGIELKLKPNTNISSVQSKIEKMLGDDFVVQNRYQQQADVFRI 240
Query: 268 YE 269
E
Sbjct: 241 ME 242
>gi|162449906|ref|YP_001612273.1| integral membrane protein [Sorangium cellulosum 'So ce 56']
gi|161160488|emb|CAN91793.1| integral membrane protein [Sorangium cellulosum 'So ce 56']
Length = 720
Score = 74.0 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 74/138 (53%), Gaps = 15/138 (10%)
Query: 147 GKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGM 206
GVIIG++LA++L + +GD++ +LSP G++ P G+ RS+ + V +F +YD
Sbjct: 444 YPGVIIGRELAKSLHVLVGDEVTLLSPMGELGPTGVMPRSRRFRVAAIFYSGMYEYDVTH 503
Query: 207 VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL---------------GNG 251
Y+ ++EAQ +F+L++ ++ I++ V DP+ +++ + +
Sbjct: 504 AYVLMEEAQRFFSLDDKITHIDIRVPDPERVQEVRPAVEAAVAASAALDEAPEGGKPPPQ 563
Query: 252 VVVIDWQQRYQIFFSCYE 269
+ V DW + + FS +
Sbjct: 564 LRVRDWMEMNKNLFSALK 581
Score = 53.2 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
VA R++ +++ F+++ S +S GV + AL V S+M GF D+ +++LG N H+V
Sbjct: 259 VAARHVRASKS-GFLTVISVLSMAGVAVSSCALCSVTSIMGGFGADLKRKILGNNAHMV 316
>gi|78186915|ref|YP_374958.1| ABC transporter permease [Chlorobium luteolum DSM 273]
gi|78166817|gb|ABB23915.1| probable ABC transporter permease protein [Chlorobium luteolum
DSM 273]
Length = 423
Score = 74.0 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A R+ F+ ++ I+I S IS +G++IGV L+VVMSV+NGF++ L I+
Sbjct: 11 ALWIARRFSFARKRFRVINIISSISLLGIIIGVSTLLVVMSVLNGFQKLARDMFLSIDSP 70
Query: 68 VVIQQKYYPLVDYQF 82
V + K + +
Sbjct: 71 VQLVSKEGRSMPFDQ 85
>gi|269123600|ref|YP_003306177.1| hypothetical protein Smon_0832 [Streptobacillus moniliformis DSM
12112]
gi|268314926|gb|ACZ01300.1| protein of unknown function DUF214 [Streptobacillus moniliformis
DSM 12112]
Length = 383
Score = 74.0 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/265 (16%), Positives = 96/265 (36%), Gaps = 27/265 (10%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
E +A R++ + S +S +G+ I + +V +++ NG + +M+ +L ++
Sbjct: 2 IEFFIAKRHIIERK------FQSIVSILGIAIALTVFVVSLAISNGLKNNMLNSILTLSP 55
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
H+ + +Y I+ ++D S S + ++ + +
Sbjct: 56 HISVGIYQDYQQEYIDISKKIDKYNFKDVNYRIESQGLIKVNGISKSTLIIGTNLEKLNL 115
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ ++ S + +L L + K ++T + +R
Sbjct: 116 NVVEGSIEK------------------DNLTSVLVGNEFIKNTGTRVGDEITVLTSEMRE 157
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP---DAIEKTHEN 243
+ G+F+ F +YD+ ++ L+ QL S I + V +P D ++ +
Sbjct: 158 IKAVISGVFKTGFYNYDSDLLLFPLETLQLLEERGEVASTIAILVDNPNKTDNLDLLVRD 217
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCY 268
I G+ V W Q S
Sbjct: 218 INESYGDKVYARSWNMDNQSLLSAI 242
>gi|58699345|ref|ZP_00374119.1| lipoprotein releasing system transmembrane protein, putative
[Wolbachia endosymbiont of Drosophila ananassae]
gi|58534140|gb|EAL58365.1| lipoprotein releasing system transmembrane protein, putative
[Wolbachia endosymbiont of Drosophila ananassae]
Length = 139
Score = 74.0 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ FE+ +A YL + F SI + S IG+ +GV LIVVMSVMNGFR ++ +L
Sbjct: 1 MSIAFEITMAACYLRAKNAR-FCSIMTLFSIIGIALGVATLIVVMSVMNGFRAKLLDSIL 59
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQ 103
GI+GH+ + DY ++ ++ IP ++K P + Q
Sbjct: 60 GIDGHINVYFDRNINSDYYAVSKSIERIPGILKATPMTNDQ 100
>gi|303250473|ref|ZP_07336670.1| lipoprotein releasing system transmembrane protein [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|302650461|gb|EFL80620.1| lipoprotein releasing system transmembrane protein [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
Length = 353
Score = 73.6 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/229 (15%), Positives = 78/229 (34%), Gaps = 13/229 (5%)
Query: 41 MALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFV 100
MAL++V+SVMNG + +L H ++ + Q ++ V V
Sbjct: 1 MALVIVLSVMNGLENMQKRNLLSTLPHAIVLPQEGHFDKNQSLSLPAFASKSVAINKANV 60
Query: 101 SGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNL 160
Q+ + G + + + V+IG LA L
Sbjct: 61 IIQS---------QQGINAGQLLGVENESDDPMLIGEAVKTLLPQGEFNVLIGSRLANKL 111
Query: 161 GISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL 220
I G+KI ++ + + + + ++ +L + +
Sbjct: 112 NIGTGEKIRLMITENSQYTPIGRVPVQRLFNVAGIYHTNNEASEYTLFANLADVGRLLRI 171
Query: 221 -ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
E+ V G+ ++++DP + + + + + DW+++ FF
Sbjct: 172 TEDQVQGMRLYLQDPFQVTELSQYFNA---DSYKISDWREQKGEFFQAV 217
>gi|298291197|ref|YP_003693136.1| hypothetical protein Snov_1198 [Starkeya novella DSM 506]
gi|296927708|gb|ADH88517.1| protein of unknown function DUF214 [Starkeya novella DSM 506]
Length = 408
Score = 73.6 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/281 (16%), Positives = 89/281 (31%), Gaps = 21/281 (7%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
MS + FE I A R+L R + GV IGV ++ + +++ G + + IKR
Sbjct: 1 MSRWLPFEWIAALRFLGEGRMQ------TAFILGGVTIGVGVIVFMSAMLAGLQANFIKR 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
V+ + + + ++ +S + + ++ + V
Sbjct: 55 VITSQSQIQLLPPDEVARPLRDRPGVIEGAIVQKPTQRVLSIDQWQAIAAAMRARPDVLV 114
Query: 121 ISNS-------------DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK 167
++ + + Y + D + L + K
Sbjct: 115 VAPTVSGAALAVRGDAGRSISIIGMEPAQYFQIVRVPDYVVAGEVRLGTDDILVGTELAK 174
Query: 168 INILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGI 227
S + + T+ G+F + Y++L+ AQ L + I
Sbjct: 175 NLGASVGDKIIVTTANGGRRVLTITGIFDFGSKGVNERFAYVALRTAQSLLKLIGGATSI 234
Query: 228 EVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
++ V D A E +I I+ V W FF+
Sbjct: 235 DLTVSDIYAAEDIASDIEAIVP--VKADSWITTNAQFFTAV 273
>gi|15605828|ref|NP_213205.1| hypothetical protein aq_296 [Aquifex aeolicus VF5]
gi|2982995|gb|AAC06608.1| hypothetical protein aq_296 [Aquifex aeolicus VF5]
Length = 416
Score = 73.6 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/281 (15%), Positives = 90/281 (32%), Gaps = 28/281 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +++++ ++ +F I+ +GVMIG A IV+ S++NGF++ ++ L INGHV
Sbjct: 5 LFLSFKFFVERKRQSF------IATLGVMIGTTAYIVMSSMVNGFQKYFLEEALNINGHV 58
Query: 69 VIQQKYY-------PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
I + L P+ K + + +
Sbjct: 59 KIFVEAREKGESFLKKFFPDKNFKILGEKPEETKDKIANYREILRKYSQDKNVIGITVHL 118
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINI----------- 170
+ K + + K L + +
Sbjct: 119 IGNGVLTYGVKEKPATFVGIIPKLEDKTLNVSKYLQEGRLNELERNKDYVILGIKLAQEL 178
Query: 171 --LSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIE 228
V V+ + D +Y+ +++ Q + V+ +
Sbjct: 179 GIRETGKKVLLYAPSGEVYRLKVIDFLNTGITEIDKSRIYLHIKKLQDILERQGEVNEVV 238
Query: 229 VFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ +KDPD E + R G WQ+ ++ F S ++
Sbjct: 239 LKLKDPDLAPFYAEKLSRE--TGYKAESWQESFKNFLSIFK 277
>gi|329965030|ref|ZP_08302018.1| efflux ABC transporter, permease protein [Bacteroides fluxus YIT
12057]
gi|328524180|gb|EGF51254.1| efflux ABC transporter, permease protein [Bacteroides fluxus YIT
12057]
Length = 416
Score = 73.3 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 60/283 (21%), Positives = 105/283 (37%), Gaps = 23/283 (8%)
Query: 1 MSIFSRFEVIVAWRYLF-SNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
M++ +A R S A I+ IG+ IG+ +I+ +SV+ GF+ ++ +
Sbjct: 1 MNM--DLSRFIALRIYRNSEPGKQVSRPAVLIAMIGIAIGLAVMIIAVSVIVGFKSEVRE 58
Query: 60 RVLGINGHV-------VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSG 112
+V+G H+ V + P+V + L P+V V + + + +
Sbjct: 59 KVVGFGAHIQVSNLDAVRSYETRPVVVGDSMLTALSAYPEVKHVQRYSTKPGMIKTSDAF 118
Query: 113 GSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILS 172
VL D ++ +D V+I K LA L + +GDKI+
Sbjct: 119 QGIVLKGVGPEYDRAFFCRHLVEGDIPQFSDSASSNRVVISKSLAGKLKLKLGDKIDTYY 178
Query: 173 PYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK 232
DV + I T + F D MV +L + VSG+E+ ++
Sbjct: 179 IQEDVRARRLVIAGIYQTNFSEYDNLFLLTDLNMV------NRLNKWEPDQVSGVELELR 232
Query: 233 DPDAIEKTHENIVRIL-------GNGVVVIDWQQRYQIFFSCY 268
D +E+T I G V + +Q F+
Sbjct: 233 DYGTLEETTYRIAADTDERPDRNGAEYCVRNVEQLNPQIFAWL 275
>gi|162449358|ref|YP_001611725.1| ABC transporter, permease protein [Sorangium cellulosum 'So ce 56']
gi|161159940|emb|CAN91245.1| ABC transporter, permease protein [Sorangium cellulosum 'So ce 56']
Length = 545
Score = 73.3 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/105 (33%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ + VA RYL S ++ AFIS+ + + +GV +GV AL VMSV GF+ + ++VLG+
Sbjct: 1 MSYPIEVALRYLGSKKR-AFISVGTTFAILGVALGVAALATVMSVTGGFQAEFREKVLGV 59
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGL 109
N HV++ + +Y+ I ++ +P V+ V PF ++
Sbjct: 60 NAHVLVIKYSTDFREYRSIMEQVSKVPGVVGVAPFSINPMMLTHG 104
Score = 65.2 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
K + V+ +F F YD + Y L E Q +++ + V+G+E+ V D D I +
Sbjct: 323 KRFRVIAIFEAGFEQYDTKLAYADLYETQAFYDQGDTVTGVEMKVDDIDNASGIAREISK 382
Query: 247 ILGNG-VVVIDWQQRYQIFFSCY 268
+LG+G +DW++ F+
Sbjct: 383 LLGSGLYYTMDWEELNHGLFTAL 405
>gi|312886035|ref|ZP_07745662.1| protein of unknown function DUF214 [Mucilaginibacter paludis DSM
18603]
gi|311301492|gb|EFQ78534.1| protein of unknown function DUF214 [Mucilaginibacter paludis DSM
18603]
Length = 406
Score = 73.3 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/267 (12%), Positives = 93/267 (34%), Gaps = 3/267 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A R F +++ F + I+ IG+M+G+ +I+ ++++ GF+ ++ +++ G
Sbjct: 1 MNFASFIASRISFRSKR-TFSKLIVRIAIIGIMLGLGVMILSVAIVKGFKSEVREKIRGF 59
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
G + + + D + + A + +
Sbjct: 60 AGDIQVAKLDLNASFENSPITANDTFVSRCRANRQLVSIAPFATKNGIIKANNEIEGVVM 119
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM-GMG 183
+++ + + + +++ + +
Sbjct: 120 KGIDEHYNWAFIKAMLVTGTVINFKDPVDAQKQILISQYTANRLKLKVGDDFLMYFVQEP 179
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHE 242
+R + + ++G+F + + D V L + N +N + G E+ V D + + +
Sbjct: 180 LRKRKFRIVGIFDIGVEEVDKTFVIGDLSLIKRLNNWNDNQIGGYEIRVTDFNQLTNINS 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
I I+ + + + YQ F +
Sbjct: 240 AIGNIIPVALRSVTITESYQTIFDWLQ 266
>gi|322633904|gb|EFY30642.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Montevideo
str. 515920-1]
Length = 73
Score = 73.3 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ S +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L
Sbjct: 1 MASPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRIL 60
Query: 63 GINGH 67
+ H
Sbjct: 61 AVVPH 65
>gi|94984920|ref|YP_604284.1| hypothetical protein Dgeo_0813 [Deinococcus geothermalis DSM 11300]
gi|94555201|gb|ABF45115.1| Lipoprotein releasing system, permease, LolC/E family [Deinococcus
geothermalis DSM 11300]
Length = 390
Score = 73.3 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/242 (16%), Positives = 77/242 (31%), Gaps = 13/242 (5%)
Query: 30 FISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDF 89
++ +G+ +GVM LI +S+ NGF +I+ L + H+ + D A
Sbjct: 25 LLTVLGIAVGVMVLIAALSLTNGFTRALIEATLRASPHLSLMSWTPGPRDAALEARMRAD 84
Query: 90 IPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKG 149
+ SSG + G+
Sbjct: 85 SRVTAFMPFLGDKGLLTRPASSGRGAGVDFTTLFGVTPEATQVLHLAPEEGRLLRTLGQN 144
Query: 150 VIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYM 209
++ S + +V + G R + V G+F D+G +
Sbjct: 145 EVL--------LGSALARSVGAFTGDEVRLLNSGQRRVTLRVKGVFNTGNYLIDSGYAFT 196
Query: 210 SLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFS--C 267
SL Q +N ++G ++ +K+PD + ++ R L + WQ Y
Sbjct: 197 SLGTLQALQGTQN-ITGYQLRLKNPDTAPQVGSDLTRTLP--YTALPWQSLYGTLLDQLA 253
Query: 268 YE 269
+
Sbjct: 254 LQ 255
>gi|120437656|ref|YP_863342.1| LolC-like FtsX family membrane protein [Gramella forsetii KT0803]
gi|117579806|emb|CAL68275.1| LolC-like FtsX family membrane protein (predicted permease)
[Gramella forsetii KT0803]
Length = 400
Score = 73.3 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/266 (15%), Positives = 92/266 (34%), Gaps = 6/266 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+F + +A RYLF+ K+ I+I + I+ IGV G +L +V+S +G R+ +
Sbjct: 1 MKFPLYIAKRYLFTKSKSNAINIITIIAAIGVFAGAFSLFIVLSGFSGLRDFSLSFSNEF 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + + ++ D ++ + + + S ++G+
Sbjct: 61 DPDLKAFPQEGKVIKISEEQINQLQQIDGVETFSKIVEERVILTYKSKEQPAYIKGVDEK 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGV-IIGKDLARNLGISIGDKINILSPYGDV----TP 179
S + S +G + + + L + + + I+ P
Sbjct: 121 YRSVNKIDSSIVFGTWLTNSEPQVVIGNGLSRLLDVGTFNYQNLLKIMVPKPGKGAITMT 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIE 238
+ T++ + D+ V+ L A+ NL S IE ++ + +
Sbjct: 181 NLQDAFNTRQTIVSGIYSVNEELDDKYVFTHLNFAKDLLNLGAEEYSAIEFKLRPGVSTD 240
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIF 264
+ E I ++ + +
Sbjct: 241 QVTEEINKVFDGNATIKTRAELNDAL 266
>gi|21228952|ref|NP_634874.1| ABC transporter, permease protein [Methanosarcina mazei Go1]
gi|20907489|gb|AAM32546.1| ABC transporter, permease protein [Methanosarcina mazei Go1]
Length = 405
Score = 73.3 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 108/267 (40%), Gaps = 21/267 (7%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+E+ +A R + S +K +I + + + V+M++++GF++++++ + N
Sbjct: 18 YELKIALRQILSRKKQTLFAILAVALAV------AVITVMMAMLSGFQDELVRSSIENNP 71
Query: 67 HVVIQQKY---YPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
H+VI + + Y++ + + VI V P GQA + + L
Sbjct: 72 HIVISPQDEGEEFIHLYRYTSALIAKKEGVIAVSPKYLGQAALEYRDNAEGVSLQGVNPE 131
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
S+ + ++ + G++ G+++G LA NL + IGD+++++ P
Sbjct: 132 SEENVMRVNKDVIEGDLLTLVHTKYGILLGDRLAENLEVHIGDRVDVVFPGSQT------ 185
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ + D + Y L Q +FN VS I V V DP +
Sbjct: 186 ----TSFKVVGLVHTGTAADETIAYARLDSVQDFFNEPGVVSTIGVRVADPYQANVIASS 241
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYES 270
I R G+ + W + E+
Sbjct: 242 IERE--TGLNAVSWSEANAEILGLLET 266
>gi|254283709|ref|ZP_04958677.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[gamma proteobacterium NOR51-B]
gi|219679912|gb|EED36261.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[gamma proteobacterium NOR51-B]
Length = 408
Score = 72.9 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 107/260 (41%), Gaps = 8/260 (3%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A R +R + + S +S +G+++ V L+ V+SVMNGF +M +R+L + H
Sbjct: 7 WHLALRQTL-DRGDGLSAFLSRLSMVGLILAVALLLAVLSVMNGFEREMRERILALVPH- 64
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
V + + P+ ++ ++ + + V V PFV A + S + L+ + S
Sbjct: 65 VTVRGFTPIEEWAQRSSDIAALSGVQSVQPFVEADALLMRGRSVEATRLLGIGATSA--- 121
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ FS + G+I+G LAR L + G + +L P G + +
Sbjct: 122 --DRFSSLVTPGGAELFADGGIILGAALARRLNVEAGSGLTLLVPTGGNPVSPASAQPRR 179
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
TV G+ + +V + +E VSG+ + + D A + R L
Sbjct: 180 LTVNGLLNSGTELDER-LVLADIDVVADLAGIETGVSGLSIQLDDLFAAPAVRWQLSREL 238
Query: 249 GNGVVVIDWQQRYQIFFSCY 268
+ V DW ++
Sbjct: 239 DATLYVSDWTLTQGNLYAAI 258
>gi|188994889|ref|YP_001929141.1| hypothetical protein PGN_1025 [Porphyromonas gingivalis ATCC 33277]
gi|188594569|dbj|BAG33544.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
33277]
Length = 407
Score = 72.9 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/267 (13%), Positives = 94/267 (35%), Gaps = 7/267 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A RYLFS ++ + +++ S +S I V + AL+ ++S+ NG+ ++
Sbjct: 1 MNFPFFIARRYLFSRKRFSAVNVVSLVSAIAVCVVSSALVCILSIFNGYEALIMTHSAVT 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ ++I+ L+ + I F+ + V + G+ +
Sbjct: 61 DPPLMIRSADNSLIKADDKTLLTALEAEGIGSYSFILTGEGLVKTKYRQQAVSLMGVDDR 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDR-----GKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
++ F G + D G I ++ G ++ + G + P
Sbjct: 121 YPRTVKIDSIVFAGTFATDTLSGATALNVGAAIATEMQLGAGFVEAVEVIVPRRIGLINP 180
Query: 180 MGMGIRSKSYT-VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN-AVSGIEVFVKDPDAI 237
+ KS + ++ + +S+ + + + + + ++
Sbjct: 181 LVPAGAFKSLQGQVASVFASGLQPEDNSIILSIDSLRKLLDYSDHEAEAVAIQLQTGSDA 240
Query: 238 EKTHENIVRILGNGVVVIDWQQRYQIF 264
E+ ++ L + V+D ++
Sbjct: 241 EQIALHLKETLRDSYQVLDLAGQHPEI 267
>gi|320535250|ref|ZP_08035374.1| efflux ABC transporter, permease protein [Treponema phagedenis
F0421]
gi|320147903|gb|EFW39395.1| efflux ABC transporter, permease protein [Treponema phagedenis
F0421]
Length = 427
Score = 72.9 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 9/259 (3%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+ R+ + +I S G+ +GV ALIV++SVMNGF+ I +L ++ +
Sbjct: 11 FILKRF-NAADTRGRSAITGIFSIAGISLGVTALIVILSVMNGFQMGFIDAILQVSSAHL 69
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
L + + + F Q + G S G L+R + +
Sbjct: 70 R------LSGAKTDIEHAEKFGGYVSFYRFSEAQTLMEGNCSRQQGALLRAVPTDLRAKD 123
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
K ++ I + + + +
Sbjct: 124 SGFNEIVKIMSGTFDLEKKNTVVLGYELARQLSIKTGDIITVLAVSGSSDTNIFPENNQL 183
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
V G F+ + + D ++SL+ + + V +++P+ K ++ + +
Sbjct: 184 LVTGTFKTGYYEIDASFAFVSLETGTIICGESETYNA-AVKLENPEHDSKYLHSLQKTIP 242
Query: 250 NGVVVIDWQQRYQIFFSCY 268
+ + W+ + FF
Sbjct: 243 S-LHAESWRTYNRAFFGAL 260
>gi|304382768|ref|ZP_07365252.1| ABC superfamily ATP binding cassette transporter permease protein
[Prevotella marshii DSM 16973]
gi|304336087|gb|EFM02333.1| ABC superfamily ATP binding cassette transporter permease protein
[Prevotella marshii DSM 16973]
Length = 415
Score = 72.9 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 47/274 (17%), Positives = 94/274 (34%), Gaps = 10/274 (3%)
Query: 5 SRFEVIVAWR-YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F +A R Y ++ + A I+ +GV IG+ ++V + V+ GF+ + +V+G
Sbjct: 1 MNFPFFIARRIYAENDERRKVSRPAIRIATLGVAIGLAVMLVSVCVVLGFKHSIRDKVVG 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSG-QAFVSGLSSGGSGVLVRGIS 122
GH+ + + D + V+K + V Q F + G+
Sbjct: 61 FGGHITVADFMTLQGSEPYPVCMNDSMVRVLKGIRGVQHVQRFALKQGILKTDNDFLGVM 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
++ V + L + ++ +++ S
Sbjct: 121 LKGVGQEFDTTFIHRHLVEGAIPAFSDMSSSNRLLISQIMADKLRLHTGSKVFAYFIDND 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
++++ +TV G+++ +D + + L A E + G E+ V D D I
Sbjct: 181 RVKARRFTVAGIYQTNLTRFDETVCFTDLYTAVKLNGWESDQAGGAELTVDDFDCIADVE 240
Query: 242 ENIVR-------ILGNGVVVIDWQQRYQIFFSCY 268
+ +VR G Q FS
Sbjct: 241 DIVVRKVNRTTDKYGETYSSETIQDANPQIFSWI 274
>gi|329894109|ref|ZP_08270094.1| hypothetical protein IMCC3088_225 [gamma proteobacterium IMCC3088]
gi|328923281|gb|EGG30601.1| hypothetical protein IMCC3088_225 [gamma proteobacterium IMCC3088]
Length = 403
Score = 72.9 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/270 (14%), Positives = 83/270 (30%), Gaps = 12/270 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ SR AWR L+ N++ S + V I V A++ ++++ GF + ++ +
Sbjct: 1 MISRL----AWRNLWRNKER------SLLMISAVAIAVCAMLFMVAMTRGFMQGILDSGI 50
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPF--VSGQAFVSGLSSGGSGVLVRG 120
+ L D VL V+ + +
Sbjct: 51 NNLPGHLQAHAAQYLDDPSIDHRFNTPSETTQSVLDDPSVARWFQRIKVPAVVQSEYASQ 110
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ L +
Sbjct: 111 GVTLLGIEPEREIQDQRLGYRVVEGEDITSQSNGILIGAKLSEKLETQLGKRIVLMTQSG 170
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ + Y ++G+++ F + VY+ L +AQ + N +S +F D +E+
Sbjct: 171 NGALAERGYRIVGVYQTTFAAKEEAEVYLPLNQAQSLLEVPNQISETALFTSDIGELERL 230
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+++ LG + V+ W Q + + ++
Sbjct: 231 QDSLQTALGAEIEVLRWDQIDEYLSASMQT 260
>gi|167762172|ref|ZP_02434299.1| hypothetical protein BACSTE_00524 [Bacteroides stercoris ATCC
43183]
gi|167699815|gb|EDS16394.1| hypothetical protein BACSTE_00524 [Bacteroides stercoris ATCC
43183]
Length = 414
Score = 72.9 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 56/280 (20%), Positives = 106/280 (37%), Gaps = 23/280 (8%)
Query: 5 SRFEVIVAWRYLFSNR-KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+A R S+ A I+ IGV IG+ +I+ +SV+ GF+ ++ +++G
Sbjct: 1 MNLSRFIALRIYRSSDVGKQVSRPAVLIATIGVAIGLAVMIIAVSVIIGFKSEVRDKIIG 60
Query: 64 INGHVV-------IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
H+ + P+ + L V V + + + + V
Sbjct: 61 FGSHIQISNSDAARSFETRPIAVTDSMLAALADNSGVKHVQRYSTKPGMIKTSDAFQGMV 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
L S+ + +D V++ K +A L + +GDKI+ D
Sbjct: 121 LKGIGPEYGSSFFRRHLIEGEFPQFSDSASTNRVVVSKAIADKLKLKLGDKIDTYYIQDD 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPD 235
V R++ T++G+++ F +YDN + L + VSG+E+ + D D
Sbjct: 181 V-------RARRLTIVGIYQTNFSEYDNLFLLTDLCLVNRLNKWHPDQVSGVELELYDYD 233
Query: 236 AIEKTHENIVRI-------LGNGVVVIDWQQRYQIFFSCY 268
+E+T I G V++ +Q F+
Sbjct: 234 KLEETTYRIADEVARHPDPYGAEYCVLNVEQLNPQIFAWL 273
>gi|146298831|ref|YP_001193422.1| hypothetical protein Fjoh_1070 [Flavobacterium johnsoniae UW101]
gi|146153249|gb|ABQ04103.1| protein of unknown function DUF214 [Flavobacterium johnsoniae
UW101]
Length = 370
Score = 72.5 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/243 (16%), Positives = 77/243 (31%), Gaps = 8/243 (3%)
Query: 34 IGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDV 93
+G+++G MAL VV+SV +G + + I+ + + A + + +
Sbjct: 1 MGIIVGTMALFVVLSVFSGLKVFSLSFTNEIDPDLK--MTSTLGKSFFISAQQEQDLKKI 58
Query: 94 IKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIG 153
V + + + N R N V+IG
Sbjct: 59 NGVASYTKIIEERVLFIFKDKQHVTYLKGVDSLYPVVNDIKRKLFNGQWLKPDSYQVVIG 118
Query: 154 KDLARNLGISIGDKIN-----ILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+A++ + I D N P +K+ + D D+ V+
Sbjct: 119 YGIAQDFSMGILDFENPLQIFAPKPGKGAIENPEEAFNKTDVLPVGIYSISEDLDSKYVF 178
Query: 209 MSLQEAQLYF-NLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSC 267
L Q N +SGIE +K+ + +I N + + + Q + +
Sbjct: 179 ADLGLTQELLMYKPNQISGIEFHLKENADENAVKAQLEKIFNNKITLKNRAQLNESLYKM 238
Query: 268 YES 270
+
Sbjct: 239 LNT 241
>gi|85711278|ref|ZP_01042337.1| ABC-type transport system, involved in lipoprotein release,
permease component [Idiomarina baltica OS145]
gi|85694779|gb|EAQ32718.1| ABC-type transport system, involved in lipoprotein release,
permease component [Idiomarina baltica OS145]
Length = 370
Score = 72.5 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 82/231 (35%), Gaps = 6/231 (2%)
Query: 41 MALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQ--FIANRLDFIPDVIKVLP 98
MAL+VVMSVMNGF ++ +R+LG HV + + + V
Sbjct: 1 MALVVVMSVMNGFENELKQRILGGVPHVQLYGDHVLAELDDVTEKLPKGALQSVSPYVST 60
Query: 99 FVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLAR 158
Q + G ++ + G S +I+G+ LA
Sbjct: 61 EALVQVPGNLAVVTLQGFDTGDSAHRTIPTALEQ-ALIAGQWSRLATGEYNIILGQTLAN 119
Query: 159 NLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF 218
L ++IGDK+ I+S G V + S+ L D D + ++ +
Sbjct: 120 QLKLAIGDKVRIVSSKGAVYSPLGMLPSQRTFRLVGIFAMQSDLDKHLAVANIDDVARLI 179
Query: 219 NLENAVS-GIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
A +++ + D K I + + V DW+QRY F
Sbjct: 180 RDPRAAQKQVQLQLNDAFNAPKVASIIRS--NSTLSVTDWRQRYGQLFDAV 228
>gi|281420375|ref|ZP_06251374.1| putative membrane protein [Prevotella copri DSM 18205]
gi|281405520|gb|EFB36200.1| putative membrane protein [Prevotella copri DSM 18205]
Length = 415
Score = 72.5 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 49/274 (17%), Positives = 94/274 (34%), Gaps = 10/274 (3%)
Query: 5 SRFEVIVAWR-YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F + +A R Y K+ A I+ GV IG+ +I+ + V+ GF+ + +V+G
Sbjct: 1 MNFPLFIAKRLYSDQGDKHKVSRPAIHIATAGVAIGLAIMIMSVCVVLGFKHTIRDKVIG 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSG-QAFVSGLSSGGSGVLVRGIS 122
H+ + Q+ D + +V+K +P V Q F + G+
Sbjct: 61 FGSHIQVADFMTLQQQNQYPVVMNDSMVNVLKKIPGVKHVQKFAMKEGILKTDSDFLGVM 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+S + + + + ++ K+
Sbjct: 121 FKGVGPDFDSTFIHQNMIEGSIPKFDDKASHNQILISQLMADKLKLKTGERIFAYFFDDN 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
+R + +T+ G+++ YD MVY L A E+ SG E+ V D + + +T
Sbjct: 181 AVRMRRFTIKGIYQTNLKKYDEVMVYTDLYTAVKLNGWEEDQASGAELTVNDFNKLNETE 240
Query: 242 ENIVRI-------LGNGVVVIDWQQRYQIFFSCY 268
+ I+ G + F
Sbjct: 241 DYIINKVNRTVDHYGETYSSSTIKDLNPNIFQWL 274
>gi|300853765|ref|YP_003778749.1| putative ABC transporter [Clostridium ljungdahlii DSM 13528]
gi|300433880|gb|ADK13647.1| putative ABC-type transport system [Clostridium ljungdahlii DSM
13528]
Length = 384
Score = 72.5 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 42/263 (15%), Positives = 93/263 (35%), Gaps = 20/263 (7%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F VA ++L ++ F+ +G+ +GV I + + +G ++ ++
Sbjct: 1 MF--ISSKVALQFLKHSKLQTFV------IILGIAVGVSVQIFIGLLSSGLENTILNKIA 52
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G + V + + ++ I N++ +K V L V +RG
Sbjct: 53 GNSAQVTVYSNNGSIENWSDIKNKIVKEDKNVKATAPVVDSQVFIKLKDTNQPVQIRGFM 112
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
D + L N Y + + K L ++ M
Sbjct: 113 PEDVNSLYNIKGSIYEGKMYENSGQV-----------IIGKDLKKKLDLKLGDNIDLFTM 161
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
G + + ++G F + + V L + Q + N + IE+ VKD + +
Sbjct: 162 GGKKLTLNIVGFFDLGAAKVNGAWVITDLGDVQNLIDFGNKATSIEIAVKDIYNADLEGK 221
Query: 243 NIVRILGNG-VVVIDWQQRYQIF 264
+ +I+ + + V +W+ + +
Sbjct: 222 KVTKIISDNSLNVQNWKDQNKFL 244
>gi|329848362|ref|ZP_08263390.1| permease family protein [Asticcacaulis biprosthecum C19]
gi|328843425|gb|EGF92994.1| permease family protein [Asticcacaulis biprosthecum C19]
Length = 400
Score = 72.5 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 50/278 (17%), Positives = 84/278 (30%), Gaps = 27/278 (9%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
F VA RYLFSN + + GV +GV I + +++ G + +V G +
Sbjct: 2 FAFTVARRYLFSNPLQ------TVLLVAGVALGVTVFIFITALIAGLAVLLTDQVTGNSA 55
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
HV + I V V Q G I+ S
Sbjct: 56 HVTLDPPTRVARV----LPGAQPIESVALVSTVQRRQIRDWPRIEGLLRAEPSVIAISPQ 111
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGI---------------SIGDKINIL 171
R + + I + I + L
Sbjct: 112 ITGSGFLVRGEAVAQVEVIGLEPQGIDAITPISSKIISGSNALGADGLLIGERLAQELGL 171
Query: 172 SPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFV 231
V + TV G++R D + ++SLQ A+ F+L V+ IE+ +
Sbjct: 172 YAGQVVLLRTERNAERQLTVKGIYRTGLQSLDERVAFLSLQTARPLFDLPEGVTKIEIKL 231
Query: 232 KDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+P + + + G+ I WQ + +
Sbjct: 232 NNPTTAREEADFLAEA--TGLRAISWQDKNLDLEGALK 267
>gi|282877898|ref|ZP_06286707.1| efflux ABC transporter, permease protein [Prevotella buccalis ATCC
35310]
gi|281299899|gb|EFA92259.1| efflux ABC transporter, permease protein [Prevotella buccalis ATCC
35310]
Length = 415
Score = 72.1 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 48/274 (17%), Positives = 94/274 (34%), Gaps = 10/274 (3%)
Query: 5 SRFEVIVAWR-YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ +A R Y + K A I+ G+ IG+ +IV + V+ GF+ + +V+G
Sbjct: 1 MNLPLFIARRIYSVNGDKAEVSKPAIRIATAGIAIGLAVMIVSVCVVFGFKHAVSAKVIG 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSG-QAFVSGLSSGGSGVLVRGIS 122
H+ + + D + V+K V Q F + + G+
Sbjct: 61 FGSHIQVANFMTLQTSESYPIQMTDSLIKVLKNTQGVEHVQRFATKQGVLKTDSDFLGVV 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+S + + ++ ++ K+
Sbjct: 121 FKGVGPDFDSTFIHQNLMEGSIPAFSDTKSSNKILLSMSMAKKLKLKTGDRIFAYFIDHA 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
G+R + +T+ G+++ YD+ +M L A E + VSG E+ VKD + +++T
Sbjct: 181 GVRVRRFTIAGIYQTNLAQYDDVTCFMDLYTAVKLNGWEKDQVSGAEITVKDFNKVDETE 240
Query: 242 ENIVRIL-------GNGVVVIDWQQRYQIFFSCY 268
+ L G + FS
Sbjct: 241 AIFINRLNRTVDQYGETYSSKTIRDISPQIFSWL 274
>gi|241765402|ref|ZP_04763373.1| protein of unknown function DUF214 [Acidovorax delafieldii 2AN]
gi|241364846|gb|EER59810.1| protein of unknown function DUF214 [Acidovorax delafieldii 2AN]
Length = 408
Score = 72.1 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 33/277 (11%), Positives = 84/277 (30%), Gaps = 21/277 (7%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
FE+ VA R+L R + + +GV GV + + ++++G + + + + LG
Sbjct: 7 FELRVALRFLREGRMQ------TVLIIVGVAAGVAVIAYISALISGLQSNTLAKTLGAQA 60
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD- 125
H+ ++ +V + + + + A L G +
Sbjct: 61 HITLRAPDDLVVPAAAPQPGVAVLTETQPRAQRLRSVANWQALMPLLEGHPAVAGVSPMV 120
Query: 126 ---------FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
+ + + + + ++ + G +I +
Sbjct: 121 SGSGLALRGEASQAIALMGVELDRYDRMVGLRSKVVSGSARLSPGEAIVGRELASDLGVR 180
Query: 177 VTPMGMGIRSKSYTVLGM---FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKD 233
V + + + D + V + L+ AQ L + +++ +KD
Sbjct: 181 VGDRLTVQTGTVGDSVRVTALVDLGVKDLNRRTVIVPLRAAQSLLGLPGGATNLDLTLKD 240
Query: 234 PDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ + + + WQ+ S +
Sbjct: 241 VWVAQALVQQLRGQFP--YKIESWQETNAQLVSALNA 275
>gi|183221938|ref|YP_001839934.1| putative lipoprotein releasing system transmembrane protein LolC
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
gi|189912007|ref|YP_001963562.1| lipoprotein releasing system permease LolE [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Ames)']
gi|167776683|gb|ABZ94984.1| Lipoprotein releasing system, LolE permease component [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Ames)']
gi|167780360|gb|ABZ98658.1| Putative lipoprotein releasing system transmembrane protein LolC;
putative membrane protein [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
Length = 450
Score = 72.1 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 61/283 (21%), Positives = 122/283 (43%), Gaps = 24/283 (8%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
++ RY+ +R F+SI S +SFI + +GV L+VV+S+ NGF++ + + + H+
Sbjct: 6 LITIRYIRGSRVLGFLSIKSRLSFIVMAVGVGLLVVVLSIFNGFQKQVKESLWQGGPHIT 65
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN------ 123
I+ Y Y + D FVS + ++ S I
Sbjct: 66 IENSYGSGAIYDYETVIAHLKSDPKLAESFVSVEGNITSHGLIQSNNNFNPIMIRAVPID 125
Query: 124 ------SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD- 176
+ ++ + + + K V++GK+++ G IG +I + P G
Sbjct: 126 SIEKLVENGLPNFPRILQYNRDEISSINSKKMVVVGKEMSAIYGYGIGREITMAVPGGRF 185
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
G+ + +S+ ++G+F+ + +YD+ V++SL +AQ +F ++ AV+ I + V+ D
Sbjct: 186 TVERGVQVNVQSFRLVGLFKTGYYNYDSKFVFLSLPQAQEFFKMKGAVNQIAIKVRSLDD 245
Query: 237 IEKTHENIVRILGNG-----------VVVIDWQQRYQIFFSCY 268
++ T I+ L V + + F +
Sbjct: 246 LKLTKHRILSRLNEENWNQKIQDDTSWSVRTIAEEQENFLAAL 288
>gi|332078275|emb|CCA65708.1| predicted ABC-type lipoprotein release transporter, permease
component [Stigmatella aurantiaca Sg a15]
Length = 426
Score = 72.1 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 42/286 (14%), Positives = 87/286 (30%), Gaps = 33/286 (11%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ S +A R + N + +FI++A+ + +GV A+IV+ + +GF M V+
Sbjct: 1 MSSSLP-SIAVRNVARNGRRSFITLAAVL------LGVTAVIVLRGISDGFVRLMEDEVV 53
Query: 63 GINGHVVIQQK------------YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLS 110
+ + + + R+ +P V + + VS
Sbjct: 54 QGRTGALQIHRKGFVDSVEALPLEPNMPYDDEMRARIQSVPGVTGITGHIQFSGLVSNGV 113
Query: 111 SGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN- 169
S V ++ + S + I ++ +
Sbjct: 114 SQTMFVGRALDMKTEKQAIPRSGFDVREGGETLSEADYTHGIFGAELIKSFGAVTQEAKK 173
Query: 170 -------------ILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQL 216
I T S ++ G+ P + + + L AQ
Sbjct: 174 KALAAGTPGAQTLIEQVTLSSTSPKGRSNSYDVSIKGLSESNLPFENKRVATVPLALAQD 233
Query: 217 YFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQ 262
L+ V+ V V + +++ + + LG V WQ+
Sbjct: 234 LLGLQGRVTEYAVAVDNLQNLDRIAAELRKKLGPEYEVHTWQELQP 279
>gi|213025590|ref|ZP_03340037.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Typhi str.
404ty]
Length = 169
Score = 71.7 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 74/167 (44%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF ++ R+L + H
Sbjct: 2 LIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGE 61
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
I+ P +++ ++ +P + P+++ V ++ + + +
Sbjct: 62 IEAVNQPWTNWREALAKVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVDPKQEQQLS 121
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
+ + +IIGK +A L + GD ++I+ P +
Sbjct: 122 ALPSFVQNHAWDHFKAGEQQIIIGKGVADALNVKQGDWVSIMIPNAN 168
>gi|194333902|ref|YP_002015762.1| hypothetical protein Paes_1080 [Prosthecochloris aestuarii DSM 271]
gi|194311720|gb|ACF46115.1| protein of unknown function DUF214 [Prosthecochloris aestuarii DSM
271]
Length = 437
Score = 71.7 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 50/275 (18%), Positives = 100/275 (36%), Gaps = 19/275 (6%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A R+ F+ ++ I++ S IS G+++GV L++VMSV+NGF++ I V
Sbjct: 25 IWIARRFSFARQRFRVINVISAISLAGIILGVSTLLIVMSVLNGFQQLAWDLFATIESPV 84
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + D + S V G V+V+GI+ +
Sbjct: 85 QMLPAEGNTMSVPDSLLAELESLDAVYAAEPFSEGQAVLAGQGNGELVVVKGITAAAQQR 144
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD-------VTPMG 181
L + + +G+ LA G+S G+++ I SP TP
Sbjct: 145 L-----IARTPRETPYFSQATLSVGEMLAYKAGLSKGEQVRIFSPELISLGLESLSTPWL 199
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQL-YFNLENAVSGIEVF-VKDPDAIEK 239
+ S + +++ V S + A+ ++ SGI++ +
Sbjct: 200 LPALSFPVAQIESIFSLQRIFNDHYVLTSGEMARKILLQTNDSYSGIDIRGSGNRAEHAL 259
Query: 240 THENIVRI-----LGNGVVVIDWQQRYQIFFSCYE 269
++ L + ++Y+ F +
Sbjct: 260 LKSSLEAWLHLRGLDEHYRLRTLDEKYRDIFGVMQ 294
>gi|325955536|ref|YP_004239196.1| hypothetical protein Weevi_1934 [Weeksella virosa DSM 16922]
gi|323438154|gb|ADX68618.1| protein of unknown function DUF214 [Weeksella virosa DSM 16922]
Length = 395
Score = 71.3 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/269 (14%), Positives = 87/269 (32%), Gaps = 4/269 (1%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+A RY FS ++I + I+ I +M+ AL+V++SV +G + I+ +
Sbjct: 1 MRNIPFYIAKRYFFSKTNTNAVNIITTIAVIAIMVATAALLVILSVFSGLEKMNIRFLSD 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+N + I + I V + + ++ + N
Sbjct: 61 VNPELKISPASGKRLPNIDQLESKIKKQPSIASYAKVIEEKVYIQYNGLEDIAYLKSVDN 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + G + + R VI + + L I I +++ I +
Sbjct: 121 QFLTNNKFDTTIIAGRLFDSSQRPYEVIASEGIGTRLKIYIDNELPIRLIMPKAGTQLIK 180
Query: 184 IRSKSYTVLGMFRMRFPDYDNG---MVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEK 239
+ + F ++ ++ L Q NL + +E+ + +
Sbjct: 181 QAEDGFVMQEAFNSGIFFLNDQYDKHLFAPLALGQEMLNLSSKDAYSLELKTNGKKNLNQ 240
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ I + +G + Q F
Sbjct: 241 IKKEIAKQIGPEYTIQTRQDLDAAFLKVM 269
>gi|297521414|ref|ZP_06939800.1| outer membrane-specific lipoprotein transporter subunit LolE
[Escherichia coli OP50]
Length = 226
Score = 71.3 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/222 (18%), Positives = 87/222 (39%), Gaps = 1/222 (0%)
Query: 48 SVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVS 107
S MNGF ++ R+L + H I+ P ++Q + + +P + P+++ V
Sbjct: 1 SAMNGFERELNNRILAVVPHGEIEAVNQPWTNWQEALDNVQKVPGIAAAAPYINFTGLVE 60
Query: 108 GLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK 167
++ + + + N + +IIGK +A L + GD
Sbjct: 61 SGANLRAIQVKGVNPQQEQHLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKVKQGDW 120
Query: 168 INILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGI 227
++I+ P + M + + G+ + D+ + L +AQ Y ++ ++VSGI
Sbjct: 121 VSIMIPNSNPEHKLMQPKRVRLHIAGILQ-LSGQLDHSFAMIPLADAQQYLDMGSSVSGI 179
Query: 228 EVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + D K + + + V + W Y + +
Sbjct: 180 ALKMTDVFNANKLVRDAGEVTNSYVYIKSWIGTYGYMYRDIQ 221
>gi|262199642|ref|YP_003270851.1| hypothetical protein Hoch_6489 [Haliangium ochraceum DSM 14365]
gi|262082989|gb|ACY18958.1| protein of unknown function DUF214 [Haliangium ochraceum DSM 14365]
Length = 406
Score = 71.3 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/276 (15%), Positives = 82/276 (29%), Gaps = 22/276 (7%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+A R+L R + + +G GV ++ + +++ G +E++I + LG
Sbjct: 3 LPWFLAVRFLREGRMQ------TLLIVVGAGAGVTVIVFLSALIGGLQENLIAKTLGTQA 56
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
HVVI+ I V + + L+ +
Sbjct: 57 HVVIRPPEEVARPLLARDAGAVVISRVERPAQRIRSIDGWQRLTRALERTPGVSAVSPTV 116
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV--------- 177
S + + R I+ ++
Sbjct: 117 SGPAFATRGNAEKSVVLYGVEAARFDAIIGIRAAMIAGEFRVGGTELVIGSELADDLGVA 176
Query: 178 -----TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK 232
G RS+ + + G+F + D + V S + AQ +L S I++ V
Sbjct: 177 LGDKLRIQGTAGRSQLFAIAGVFDLGVRDVNRRWVIASTRAAQTLLDLVGGASTIDLRVA 236
Query: 233 DPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ A E I G+VV W Q +
Sbjct: 237 EIFAAEDIARRIEAR--TGLVVESWMQTNAELLTAL 270
>gi|262340821|ref|YP_003283676.1| lipoprotein releasing system transmembrane protein [Blattabacterium
sp. (Blattella germanica) str. Bge]
gi|262272158|gb|ACY40066.1| lipoprotein releasing system transmembrane protein [Blattabacterium
sp. (Blattella germanica) str. Bge]
Length = 405
Score = 71.3 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/273 (11%), Positives = 81/273 (29%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ E +A RY FS +K ++I F+S + + I +L +++ V +G K
Sbjct: 1 MKTEFYIAIRYFFSKKKTNIVNIIVFLSVLSLNISTFSLSIILFVFSGLENLNKKFYQIH 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV-------L 117
++I + V + + + +
Sbjct: 61 YPDILISSSNEGDLFIYDENINNKIKSIKEIVAFSKTMEKKIFLHYNNQEYFLSLKGVDT 120
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
+ F + + + ++ + RN + Y
Sbjct: 121 EYEKVMNQFKKIDLTNISYPDYLNVYVGLSFIRFYNPMIFRNQISVPDQILFFSYKYKKD 180
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
+ K + D ++ +L E Q + + +E+ + I
Sbjct: 181 KNTLIPFFMKKKISIKGVFQFSQKMDMAYLFCNLYEIQNIIKKKG-IQTLEIKIHKKANI 239
Query: 238 EKTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
K + +++ G+ +I ++ + F+ +
Sbjct: 240 HKVKKILMKKFGSKFNIITRIEKEKAFYKVINT 272
>gi|302338439|ref|YP_003803645.1| protein of unknown function DUF214 [Spirochaeta smaragdinae DSM
11293]
gi|301635624|gb|ADK81051.1| protein of unknown function DUF214 [Spirochaeta smaragdinae DSM
11293]
Length = 434
Score = 71.0 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 56/270 (20%), Positives = 107/270 (39%), Gaps = 4/270 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ V VAWR L + + IGV ++ LIVV V +G E + +R L
Sbjct: 1 MNLPSTVFVAWRLLNGPHGSKNRRRHVVGAIIGVAFSLIPLIVVQQVSSGMIEGISRRFL 60
Query: 63 GIN-GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
I H+ +++ ++ A + + DV+ LP V G V +
Sbjct: 61 EIGSFHLQVKRLQDGDPSFEKAAEDILRVDDVLLALPMVEGVGIVYAPDGRSGVSVRGLP 120
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
S+ Q + + + ++I K+ AR L + +GD++ +L+ Y
Sbjct: 121 SDWLERDQQAASFLSWSEGEYRLNDKNDLLISKEAARTLNVGVGDEVTLLTAYKIGGVK- 179
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD-AIEKT 240
++ + V G+F + + D +Y+ + A F ++ S I V + DP +
Sbjct: 180 TVMKPSHFVVRGIFSTGYYELDALSIYIPYKRALSLF-PDSWSSTIGVKIHDPFGEYQDV 238
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ I + L V W + + F +++
Sbjct: 239 KQRISQNLPENWRVYSWYELQRPMFESFKT 268
>gi|330508354|ref|YP_004384782.1| ABC transporter permease [Methanosaeta concilii GP-6]
gi|328929162|gb|AEB68964.1| ABC transporter, permease protein [Methanosaeta concilii GP-6]
Length = 386
Score = 71.0 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/266 (16%), Positives = 98/266 (36%), Gaps = 21/266 (7%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
FE+I+AWR++ ++ + + V + VM + +M +M +RE++I + +
Sbjct: 2 FELIIAWRHITASPR------MVLFPVLAVALAVMVIAAMMGLMESYREEIISSTVENSP 55
Query: 67 H--VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ V ++ + Y+ +++ + V V P + G A ++
Sbjct: 56 YLTVEPKEGEDYIHLYKTLSSVIWGYSGVEAVSPRLLGMAAAKYREQVKGVSIIGIDPLL 115
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ L +G+ ++ + I+G LA +L + GD ++ + G
Sbjct: 116 EDPLLGVQSDLVWGDFNDLAFKKHSAIVGAKLAEDLKLKPGDGFYLVRKGVSLKVTPAG- 174
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ D +VY+ L+ AQ + VS I + D +
Sbjct: 175 ----------YIRTGTGADESLVYLPLETAQRLMGEGDVVSEIGIKTSDLYEAPAIASGL 224
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYES 270
R + WQ + + + ++
Sbjct: 225 SR--DSFYKAQSWQDKSRNLLNLLDT 248
>gi|162449381|ref|YP_001611748.1| lipoprotein releasing system transmembrane protein lolC [Sorangium
cellulosum 'So ce 56']
gi|161159963|emb|CAN91268.1| Lipoprotein releasing system transmembrane protein lolC [Sorangium
cellulosum 'So ce 56']
Length = 409
Score = 70.6 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/278 (15%), Positives = 83/278 (29%), Gaps = 25/278 (8%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
FE VA RYL + + + V +GV ++ + +++NG + +I + LG
Sbjct: 1 MPFEWFVALRYLRDAKGQ------TALILAAVSVGVSVIVFLSALINGLQVSLIDKTLGS 54
Query: 65 NGHVVIQQKYYPLVD----------------YQFIANRLDFIPDVIKVLPFVSGQAFVSG 108
H+ +Q + Q RL I V+ A V
Sbjct: 55 QPHITLQVQREAARPLVDSSDDRDDRAVARSVQPAPQRLRSIDQWPLVMADAECTAGVIA 114
Query: 109 LSSGGSGVLVRGI-SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK 167
S G + ++ + + + R + + ++
Sbjct: 115 ASPAIVGAGFAVRAEAKNAVVVRGVDPERFLAIIDVRKRMRAGRFDVAGGDVVIGAVLAD 174
Query: 168 INILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGI 227
+ + + G+F + D V SL+ AQ + L + I
Sbjct: 175 ELGVGVGDKIRITTTEGIDDVVAITGVFSLGNEAVDKTWVITSLRRAQTLYALPGGATSI 234
Query: 228 EVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFF 265
E+ V D A E + G+ W +
Sbjct: 235 ELKVADVFAAETVAGELRGR--TGLKADSWMKINAELL 270
>gi|281424384|ref|ZP_06255297.1| putative membrane protein [Prevotella oris F0302]
gi|281401653|gb|EFB32484.1| putative membrane protein [Prevotella oris F0302]
Length = 423
Score = 70.6 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/275 (14%), Positives = 91/275 (33%), Gaps = 10/275 (3%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASF-ISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+A + + +S + I+ GV IG+ +++ +SV+ GF+ + +V+
Sbjct: 8 ILNLPFFIARKIYGGKTQGKQVSRPAIRIATAGVAIGLAVMLISVSVVLGFKHTIRDKVI 67
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSG-QAFVSGLSSGGSGVLVRGI 121
G H+ + + D + V+K +P V Q + + G+
Sbjct: 68 GFGSHIQVGSFMTLQTGDFYPIQMDDSMLTVLKTIPGVKHVQRYAMKQGILKTDHDFLGV 127
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
++ R + + I+ +
Sbjct: 128 IFKGIGAEYDTTFLHQNMRQGHIPRFTDNASSNKILISQSIADKLGVKANDKIYSYFIDK 187
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKT 240
G+R++ +T+ G+++ YD+ + L A E + +G E+ VKD ++
Sbjct: 188 NGVRTRRFTIEGVYQTNLSQYDDITCFTDLYTAVKLNGWEDDQTTGAELTVKDFSQLDDV 247
Query: 241 HENIVRI-------LGNGVVVIDWQQRYQIFFSCY 268
+V+ G ++ FS
Sbjct: 248 ENLVVKKVNRTLDHYGETYSSKTIRELCPQIFSWL 282
>gi|305665852|ref|YP_003862139.1| hypothetical protein FB2170_06190 [Maribacter sp. HTCC2170]
gi|88710623|gb|EAR02855.1| hypothetical protein FB2170_06190 [Maribacter sp. HTCC2170]
Length = 378
Score = 70.6 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/248 (11%), Positives = 78/248 (31%), Gaps = 2/248 (0%)
Query: 25 ISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIA 84
++I +FI+F+ ++IG +L +V+S G + + + + + +
Sbjct: 1 MNIINFITFLVIVIGSASLFIVLSGFAGLKTFSLSYTNIFDPDIKASPVTGKVFNITEGQ 60
Query: 85 NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDF 144
I + ++G+ +S S + +GN
Sbjct: 61 EEKLSSITGITSFSKELEEQVSFTHKGKNHFAYIKGVDDSYTSTTAIDSALIFGNWYYSQ 120
Query: 145 DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGM-FRMRFPDYD 203
+G I + + + +++P + ++ D
Sbjct: 121 QQGVAGIGLTNKLGLTINQHRNPLVVIAPKPGKGSISQSKPYNELPLVISGVYSVEETLD 180
Query: 204 NGMVYMSLQEAQLYFNLEN-AVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQ 262
V+ +L Q ++ +SGI + + I + G+V+ + +++
Sbjct: 181 KKYVFTNLALVQALLEKDSTQISGINFKLLPDADTPELRNQISSVFDEGIVLKNREEQNS 240
Query: 263 IFFSCYES 270
+ +
Sbjct: 241 TLYRMLNT 248
>gi|197123652|ref|YP_002135603.1| hypothetical protein AnaeK_3254 [Anaeromyxobacter sp. K]
gi|196173501|gb|ACG74474.1| protein of unknown function DUF214 [Anaeromyxobacter sp. K]
Length = 404
Score = 70.6 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 45/277 (16%), Positives = 87/277 (31%), Gaps = 22/277 (7%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
R ++ +A R+L R + + G +GV + +++ M+ + L
Sbjct: 1 MRLDLFLALRFLREGRAQ------TALIVGGTAVGVAVFFFLNALVAAVERGMVAQTLDA 54
Query: 65 NGHVVIQQKYYPLVDYQFI-----ANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
HVV++ + A + P ++ + A G V
Sbjct: 55 LPHVVLRPRPEAPRTPPSPEGPAAAAHVQRAPQRLRAVDQWQAVAREVAAVPGVRAVAAV 114
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILS------- 172
+ S + S S V D R V + L ++ + +
Sbjct: 115 ASGPATASRGEASRSVNLIGVDPDAYRRVLVALPGRLVEGDLRLGPSEVVVGTELAEELG 174
Query: 173 -PYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFV 231
GD + ++ V G+F + D + V + + AQ L S +EV +
Sbjct: 175 LSPGDTLRVSTAAGGRALVVAGLFDLGTRDQNLRWVLTAYRNAQALHALPG-ASALEVRL 233
Query: 232 KDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
D A + + + R G+ V W +
Sbjct: 234 DDAWAAAEVADRLRRR--TGLRVESWMDLNGRLLAAL 268
>gi|299140887|ref|ZP_07034025.1| membrane protein [Prevotella oris C735]
gi|298577853|gb|EFI49721.1| membrane protein [Prevotella oris C735]
Length = 415
Score = 70.6 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/274 (14%), Positives = 93/274 (33%), Gaps = 10/274 (3%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASF-ISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ +A + + +S + I+ GV IG+ +++ +SV+ GF+ + +V+G
Sbjct: 1 MNLPLFIARKIYGGKTEGKQVSRPAIRIATAGVAIGLAVMLISVSVVLGFKHTIRDKVIG 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSG-QAFVSGLSSGGSGVLVRGIS 122
H+ + + D + V++ +P V Q + + G+
Sbjct: 61 FGSHIQVGSFMTLQTGDFYPIQMDDSMLTVLETIPGVKHVQRYAMKQGILKTDHDFLGVI 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
++ R + + I+ +
Sbjct: 121 FKGIGAEYDTTFLHQNMRQGHIPRFTDNASSNKILISQSIADKLGVKANDKIYSYFIDKN 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
G+R++ +T+ G+++ YD+ + L A E + +G E+ VKD + ++
Sbjct: 181 GVRTRRFTIEGVYQTNLSQYDDITCFTDLYTAVKLNGWEDDQTTGAELTVKDFNQLDDVE 240
Query: 242 ENIVRI-------LGNGVVVIDWQQRYQIFFSCY 268
+V+ G ++ FS
Sbjct: 241 NLVVKKVNRTLDHYGETYSSKTIRELCPQIFSWL 274
>gi|330720585|gb|EGG98853.1| Lipoprotein releasing system transmembrane protein LolC [gamma
proteobacterium IMCC2047]
Length = 235
Score = 70.2 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 22/65 (33%)
Query: 205 GMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIF 264
+ + L + + L + V GI + + D I L +G DW +
Sbjct: 23 SLALIHLSDGAKLYRLGDGVHGIRLKLHDLFEAGPVAWRIASQLPSGYWASDWTRTQGNL 82
Query: 265 FSCYE 269
F +
Sbjct: 83 FQAIK 87
>gi|116754227|ref|YP_843345.1| hypothetical protein Mthe_0917 [Methanosaeta thermophila PT]
gi|116665678|gb|ABK14705.1| protein of unknown function DUF214 [Methanosaeta thermophila PT]
Length = 364
Score = 70.2 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/242 (15%), Positives = 92/242 (38%), Gaps = 17/242 (7%)
Query: 33 FIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV--IQQKYYPLVDYQFIANRLDFI 90
+ + + V + +S+ GF+E ++ ++ HV ++ + Y+ + R+ +
Sbjct: 1 MLAIGLAVAVSVTSVSLQAGFQEYLLDIIVKDLAHVSVSPKEGEEYIYLYRTLMERIWQL 60
Query: 91 PDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGV 150
V V P +S A +S ++ + +L+ I + + R + +
Sbjct: 61 EGVTAVSPRLSTPASLSHKNNVENVILIGVIPSEMERIYPSISERMVYGELESIQQENRI 120
Query: 151 IIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMS 210
++ K LA L + + D ++ P + + ++ + M ++S
Sbjct: 121 VMSKKLAEKLDVELDDTVDARFPDANPLNL----------MVTGIFDPPQGFPEEMTFVS 170
Query: 211 LQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFS--CY 268
L+ A+ + + ++GI++ + D ++ I G WQQ Y
Sbjct: 171 LRTARNFLGEGDVINGIDIKLHDIYMADRISREISA---TGYKAESWQQLYPEILRTIAI 227
Query: 269 ES 270
E+
Sbjct: 228 EN 229
>gi|298372268|ref|ZP_06982258.1| membrane protein [Bacteroidetes oral taxon 274 str. F0058]
gi|298275172|gb|EFI16723.1| membrane protein [Bacteroidetes oral taxon 274 str. F0058]
Length = 415
Score = 70.2 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 44/274 (16%), Positives = 99/274 (36%), Gaps = 10/274 (3%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASF--ISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
R + +A R++++ K + I+ G+ IG+ +I+ + V+ GF++++ +V+
Sbjct: 1 MRLQYFLAKRFIYNKNKKGKTTKRKGVRIATFGIAIGLAVMIISVCVVIGFKKEVSAQVV 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G H+ I + + + I +P V ++
Sbjct: 61 GFGSHIQILSYDSSSSFDRKPISVDNPTRLNISQMPEVDRVEYIVTKPGIIKTDDNFKAV 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ F N+ G K+ L
Sbjct: 121 VFKGVDSSYDWRFFRKNLIEGNIPDFGKSDDKNKMIISDKLAKQLKIGLGDEVFAYFFQQ 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN-AVSGIEVFVKDPDAIEKTH 241
+R++ + + G++ + D+DN V QE Q ++ +VS +E+ +K+ D +++T
Sbjct: 181 QVRARKFKISGIYSTTYSDFDNLFVLCRSQEIQTLNGWDSTSVSAVEITLKNFDRLDETA 240
Query: 242 ENIVRILGNG-------VVVIDWQQRYQIFFSCY 268
+I ++GN ++ Y F+
Sbjct: 241 NDIQALVGNRFDKNKLLYNTQTIKELYPQIFNWL 274
>gi|303236452|ref|ZP_07323039.1| efflux ABC transporter, permease protein [Prevotella disiens
FB035-09AN]
gi|302483303|gb|EFL46311.1| efflux ABC transporter, permease protein [Prevotella disiens
FB035-09AN]
Length = 432
Score = 70.2 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/274 (14%), Positives = 90/274 (32%), Gaps = 10/274 (3%)
Query: 5 SRFEVIVAWR-YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F + +A + ++K A I+ GV IG+ +I+ + V+ GF+ + +V+G
Sbjct: 18 MNFPLFIARKINGNEDKKRKVSKPAIRIATFGVAIGLAVMIISVCVVLGFKHTIRDKVIG 77
Query: 64 INGHVVIQQKYYPLVDYQFIANRLD-FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
HV + + D I + KV Q F + G+
Sbjct: 78 FGSHVTVANYNSLQSSDDYPIVVNDTTINKLKKVNDVRHVQRFAYTQGILKTDDDFLGVV 137
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
++ V + + + I+ + +
Sbjct: 138 LKGVGAEFDTTFIHKSMVEGSIPTFSDKENQQKILISKTIAEKLNLKVNDKIFAYFVNQQ 197
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
G+R++ +T+ G++ +D+ + + L + + SG EV + D + ++ +
Sbjct: 198 GVRTRRFTISGIYETNMKQFDSQICFTDLYTTNKLNGWKTDQCSGAEVLINDFNQLDISA 257
Query: 242 ENIVR-------ILGNGVVVIDWQQRYQIFFSCY 268
++ G ++ FS
Sbjct: 258 LKVLNSVKGTTDRYGETYSAATVIEQNPQIFSWL 291
>gi|313158749|gb|EFR58136.1| efflux ABC transporter, permease protein [Alistipes sp. HGB5]
Length = 414
Score = 70.2 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 47/281 (16%), Positives = 100/281 (35%), Gaps = 21/281 (7%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+A R +N + I+ I V + V +++ M+V+ GF++++ ++V
Sbjct: 1 MNLAFFIARRTAQRTPENK-PGVMERIAVISVALSVAVMLLAMAVIMGFKQEVSRKVAAF 59
Query: 65 NGHVVIQQKYYPLVDYQFIANR-------LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVL 117
+GH V+ R + + + P+ V + +L
Sbjct: 60 SGHAVVNGVRGVGTLDSAPVRRSARAEELIRTTEGFVSLAPYAVKGGIVRTADAVQGVML 119
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
+ D+S D R K +++ + +A L + +GDK+ +L
Sbjct: 120 KGVDGDYDWSSFGQWLVEGELPRVGDSVRTKDILLSRGMAEKLMLGVGDKVEMLF----- 174
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDA 236
G R + V G++ + D+ ++ L+ Q + + +SG E+F D
Sbjct: 175 VETGDRPRRDRFKVAGIYSSGMDEMDDAVIMTDLRNVQRLADWADGEISGYEIFTSDLAG 234
Query: 237 IEKTHENIVRILGN-------GVVVIDWQQRYQIFFSCYES 270
+ + R L + V + Y F ++
Sbjct: 235 ADDFARRLGRALLYDDADDTANLAVSSVTELYPNIFDWLKA 275
>gi|189460451|ref|ZP_03009236.1| hypothetical protein BACCOP_01092 [Bacteroides coprocola DSM 17136]
gi|189432837|gb|EDV01822.1| hypothetical protein BACCOP_01092 [Bacteroides coprocola DSM 17136]
Length = 414
Score = 70.2 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 52/280 (18%), Positives = 108/280 (38%), Gaps = 23/280 (8%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASF-ISFIGVMIGVMALIVVMSVMNGFREDMIKR--- 60
+++ +A R N +S + I+ G+ IG+ +I+ ++V+ GF+ + +
Sbjct: 1 MNWKLFIARRIYKDNEGGKEVSKPAIRIAMAGIAIGLAVMIISVAVVIGFKHQVRDKVIG 60
Query: 61 ----VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
+L + + P+ + L +P V V + S + + +
Sbjct: 61 LSSDILVTSMDEAQAYQTTPVAGGDSVMQVLRSLPSVSHVQRYASKPGMIMTADNFQGML 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
L D ++LQN D V++ + +A L + +GD + +
Sbjct: 121 LKGIAQEYDMTFLQNHLLEGEIPAFTDSIASNKVLVSRTIADRLSLKVGDNLYTYYLENN 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPD 235
+ R++ TV G+++ F YD+ + L N E + V G+E+ V D
Sbjct: 181 I-------RARRLTVSGIYQTNFSAYDDLFLITDLYTVVRLNNWEKDQVGGLEIEVSDYA 233
Query: 236 AIEKTHENIVRIL-------GNGVVVIDWQQRYQIFFSCY 268
+E+ ++NI + GN ++ Y F+
Sbjct: 234 LLEQVNDNIRGLFDEKSDRYGNMYYSRTVEEVYPQIFAWL 273
>gi|118442876|ref|YP_877600.1| lipoprotein releasing system transmembrane protein, putative
[Clostridium novyi NT]
gi|118133332|gb|ABK60376.1| lipoprotein releasing system transmembrane protein, putative
[Clostridium novyi NT]
Length = 386
Score = 70.2 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 56/263 (21%), Positives = 110/263 (41%), Gaps = 22/263 (8%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F+ + VAWR+L + + + I S + I V I + + G ++ +++
Sbjct: 1 MFA--SIKVAWRFLTKKKLQSLVIILS------IAIAVSVQIFIGLLSKGLERTLLFKIV 52
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G H+ + K + ++ +L I L +L+RG +
Sbjct: 53 GNAPHITVYSKNGSIDNWDDKIAKLTAKKGEIVSAIPNVDTQGYVKLKDITEPILIRGFT 112
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ D + + S+ Y F I+G DL LG+ +GDKINI +P+G
Sbjct: 113 SEDLNKMYKIKSKIYEG--KLFQNEGEAILGSDLKERLGVKVGDKINITTPWGKN----- 165
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL--ENAVSGIEVFVKDPDAIEKT 240
K + V G F + + + SL +AQ + L EN + IE+ + + +
Sbjct: 166 ----KEFIVTGFFDLGNIKLNKSWIMTSLSDAQYFSGLQNENKIRSIEISINNVYGADSE 221
Query: 241 HENIVRILGN-GVVVIDWQQRYQ 262
+ + ++L + + V +W+Q+ +
Sbjct: 222 GKIVEKVLNDKDLKVENWKQQNK 244
>gi|282859302|ref|ZP_06268415.1| efflux ABC transporter, permease protein [Prevotella bivia
JCVIHMP010]
gi|282587927|gb|EFB93119.1| efflux ABC transporter, permease protein [Prevotella bivia
JCVIHMP010]
Length = 415
Score = 70.2 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 49/280 (17%), Positives = 111/280 (39%), Gaps = 22/280 (7%)
Query: 5 SRFEVIVAWR-YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F + +A + Y ++ N A I+ +GV IG+ +I+ + V+ GF+ + +V+G
Sbjct: 1 MNFPLYIAKKIYTGGDQNNKVSKPAIRIATLGVAIGLSVMIISVCVVLGFKHSIRDKVIG 60
Query: 64 INGHVVIQQK-------YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
H+++ P+ Q + +L + V V + + + S +
Sbjct: 61 FGSHIIVTNFLTLEGADQVPIAINQDLIKKLKQVDGVKHVERYAYTEGVLKTDSDFLGVI 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
D ++++N+ +D + ++I + +A+ L + IG+KI
Sbjct: 121 FKGIGPEYDQAFIKNNLVEGEMPKFSDIESHNKIVISETIAKKLNLHIGNKIFAYFLNDQ 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPD 235
+R++++ ++G++ +D+ + + + Q E+ G+E+ +KD
Sbjct: 181 G------VRTRNFKIVGIYATNMKQFDSQICFTDIYTTQKLNGWNEDQYGGVELLIKDFS 234
Query: 236 AIEKTHENI-------VRILGNGVVVIDWQQRYQIFFSCY 268
+ N+ GN D +Y FS
Sbjct: 235 KLPIDANNVLHLVKNTKDKYGNTYSSSDVISQYPQIFSWL 274
>gi|257457832|ref|ZP_05622991.1| putative lipoprotein releasing system, permease protein [Treponema
vincentii ATCC 35580]
gi|257444545|gb|EEV19629.1| putative lipoprotein releasing system, permease protein [Treponema
vincentii ATCC 35580]
Length = 425
Score = 69.8 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/260 (15%), Positives = 84/260 (32%), Gaps = 9/260 (3%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ V R+ ++ K +I +S +G+ GV LIV+++VMNGF+ I +L ++
Sbjct: 10 LFVLRRFNAADTKGR-SAITGILSVLGIAFGVTVLIVILAVMNGFQRSFIDTILQVSSAH 68
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
V ++ A F Q + G ++R + +
Sbjct: 69 VQLYGSEAALEEARAAG------GFQSFYIFSETQTIMQGNYGRQQPAVLRAVPETVLDD 122
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ + ++ + L +
Sbjct: 123 DRGFAGAVTMMEGSFDLSAPHSVVLGYELARMLSVSAGDRISLLALSGTADTDIFPEDAE 182
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ G+ + + D G +MS + +L + S V +++P+A ++ +
Sbjct: 183 CLITGLMKTGYYAIDAGFAFMSTETGELLCGKQQEQSA-AVKLQNPEADGIYIAHVSAAV 241
Query: 249 GNGVVVIDWQQRYQIFFSCY 268
+ W+ Q FF
Sbjct: 242 P-ALRAESWRTYNQAFFGAL 260
>gi|330945224|gb|EGH46894.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. pisi str. 1704B]
Length = 348
Score = 69.8 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 42/191 (21%), Positives = 76/191 (39%)
Query: 79 DYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYG 138
D++ +A+ P+V +PF + +S S + + + G
Sbjct: 10 DWKPLADAALKNPEVTAAVPFTDMEGMLSYKGSMQPIQISGVDPALEHEVSIVTQHITRG 69
Query: 139 NVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMR 198
++ + GV++G AR +SIGDK+ ++ P P G+ R + TV+G+F++
Sbjct: 70 SLEDLKPGEFGVVLGDITARRFRLSIGDKLTLIVPEVSSAPGGITPRMQRLTVVGIFKVG 129
Query: 199 FPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQ 258
+ + AQ+ N V G+ + +KD + I LG G DW
Sbjct: 130 AELDGSMGLINIADAAQMQRWQPNQVQGVRLALKDLYKAPQVSTAIAAGLGEGYRADDWT 189
Query: 259 QRYQIFFSCYE 269
FS +
Sbjct: 190 HTQGSLFSAMK 200
>gi|163786899|ref|ZP_02181347.1| hypothetical protein FBALC1_16977 [Flavobacteriales bacterium
ALC-1]
gi|159878759|gb|EDP72815.1| hypothetical protein FBALC1_16977 [Flavobacteriales bacterium
ALC-1]
Length = 377
Score = 69.8 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/248 (12%), Positives = 76/248 (30%), Gaps = 6/248 (2%)
Query: 28 ASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV--IQQKYYPLVDYQFIAN 85
+ I+ GV+I AL +V+SV G ++ ++ ++ + + L A
Sbjct: 1 MTLIASGGVIIASAALFIVLSVFAGLKDYSLEFSSFVDPDLKLLPTEGKSFLFSETDKAK 60
Query: 86 RLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFD 145
+ S + + + + + + + + + +
Sbjct: 61 LISISGIAFYSKIIEERIIIKSENKNLLATLKGVDSNYLNVTNVDSMVVKGNWISPGSNE 120
Query: 146 RGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNG 205
G I +L+ + ++I P + + + + +
Sbjct: 121 VVAGSGISYNLSFGVFD-YLKPLSIYVPKPGKGQASSLKGYYNSAYVSNVGLFNINEELN 179
Query: 206 MVYMSLQ---EAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQ 262
Y+ L EN VS +E+ +++ + + L N V+ + +Q
Sbjct: 180 NEYVFADINLAKSLLSYKENQVSALELKLENGVDESEVIAQLEGTLPNRFVIKNREQLND 239
Query: 263 IFFSCYES 270
F +
Sbjct: 240 ALFKMLNT 247
>gi|168185387|ref|ZP_02620022.1| integral membrane protein [Clostridium botulinum C str. Eklund]
gi|169296246|gb|EDS78379.1| integral membrane protein [Clostridium botulinum C str. Eklund]
Length = 386
Score = 69.4 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 52/257 (20%), Positives = 108/257 (42%), Gaps = 20/257 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ VAWR+L + + + I S + I V I + + G ++ +++G H+
Sbjct: 5 IKVAWRFLTKKKLQSLVIILS------IAIAVSVQIFIGLLSKGLERTLLFKIVGNAPHI 58
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ K + +Q ++L I L +L+RG ++ D +
Sbjct: 59 TVYSKDGAINSWQEKIDKLTSKKGEIVSAIPNVDTQGYVKLKDISEPILIRGFTSEDVNK 118
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ S+ Y F I+G DL LG+ +GDKI+I +P+G K
Sbjct: 119 MYKIKSKIYKG--KLFQNEGEAILGSDLKERLGVKVGDKISITTPWGKN---------KE 167
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLY--FNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ V G F + + + +L +AQ + +N + IE+ + + ++ + + +
Sbjct: 168 FIVTGFFDLGNIKLNKSWIITNLSDAQYFAGLQKDNKIRSIEISINNVYGADREGKIVEK 227
Query: 247 ILGN-GVVVIDWQQRYQ 262
+L + + V +W+Q+ +
Sbjct: 228 LLNDKDLKVENWKQQNK 244
>gi|83311864|ref|YP_422128.1| ABC-type transport system [Magnetospirillum magneticum AMB-1]
gi|82946705|dbj|BAE51569.1| ABC-type transport system [Magnetospirillum magneticum AMB-1]
Length = 415
Score = 69.4 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 43/278 (15%), Positives = 95/278 (34%), Gaps = 26/278 (9%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ +A ++L R+ + +S +GV +GV I + ++M GF+ D I R++
Sbjct: 1 MLPLGLSIALQHLRHRRRQ------TLVSLLGVSLGVAFFIGISAMMQGFQRDFIARIID 54
Query: 64 INGHVVIQQKYYPLVDY------------------QFIANRLDFIPDVIKVLPFVSGQAF 105
+ H++++ + + + +++ L + G
Sbjct: 55 VQPHIIVKDEVRAAPKQAVERAYPDGAVSLRGLKPREEVRGIRGARNMLATLEEMPGVHV 114
Query: 106 VSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIG 165
LS + + + +Q R ++ D G + +
Sbjct: 115 APALSGNLLLRFGGKDVSVNVTGIQPERERLVTHLEKDLLSGSLDALYTTSNAIIIGEGI 174
Query: 166 DKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVS 225
+ ++ + V+G+FR DN Y L++AQ+ N N V+
Sbjct: 175 AAKAGIRKDDLISAVSPVGVVLKMKVVGIFRSNITLLDNFETYTLLKKAQVLQNRANVVN 234
Query: 226 GIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQI 263
+ + + D + I R G WQ++ +
Sbjct: 235 RLNLRLDDVEQAAPLAATIERQFG--YRSESWQEQSRN 270
>gi|88802728|ref|ZP_01118255.1| ABC transporter permease protein [Polaribacter irgensii 23-P]
gi|88781586|gb|EAR12764.1| ABC transporter permease protein [Polaribacter irgensii 23-P]
Length = 411
Score = 69.4 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 50/274 (18%), Positives = 104/274 (37%), Gaps = 12/274 (4%)
Query: 5 SRFEVIVAWRYLFSNR-KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+E+ +A R + + KN+ S I+ + +GV+ +++ ++ G + + ++ G
Sbjct: 1 MNYELFIAKRIIAGKKYKNSISSPIIKIAITAIALGVIIMLIAVATAAGLQTKIRDKMAG 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIK-------VLPFVSGQAFVSGLSSGGSGV 116
NGHV I ++ + + + V + G+
Sbjct: 61 FNGHVQIVNYDNNNSSVSTTPIFIEQDFYPEFKNIKGVKNVQVYANKGGVLRTDTDFEGI 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
+ +G+S+ + + R KGV++ + + L + +GD I
Sbjct: 121 VFKGVSSDYDWSFFKEYLISGTVPDFNQPRTKGVLLSQTIVDRLQLKLGDTI---FATFL 177
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLENAVSGIEVFVKDPD 235
T + ++ Y ++G++ FP +D M+ ++E Q EN V G EV + D D
Sbjct: 178 TTALSKLPSNRKYRIVGIYNSGFPQFDKNMMLGDIREVQKLNKWTENQVGGFEVLLDDFD 237
Query: 236 AIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
IE+ I + + Y F +
Sbjct: 238 DIEEKGAEIYSEISATLDARTILDSYPAVFDWIK 271
>gi|309791695|ref|ZP_07686187.1| protein of unknown function DUF214 [Oscillochloris trichoides DG6]
gi|308226317|gb|EFO80053.1| protein of unknown function DUF214 [Oscillochloris trichoides DG6]
Length = 414
Score = 69.4 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 51/280 (18%), Positives = 102/280 (36%), Gaps = 29/280 (10%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ S+ I+A+R L NR+ +S + V +G+ LI++ + G ++ ++ +
Sbjct: 8 MLSKL-WILAYRDLGRNRRRT------ILSIVAVALGLGLLILMNGYIAGVMDESVQNNI 60
Query: 63 GINGHVVIQQ------------KYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLS 110
+N + + L D + +A +P V P + ++ +
Sbjct: 61 RLNTGHLQIRADSYTEGELSLAWPDLLRDPEVLAAHAATLPGVRGAAPVLWAGGVIATPN 120
Query: 111 SGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINI 170
+ S G V D G++IG+ LA LG+++G +++
Sbjct: 121 DSLGIQITGIDPTSTIYD--PIREALVGGVFLSADDRTGIMIGRRLAEELGLAVGSDVSL 178
Query: 171 LSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVF 230
D + F P YD G V M L +AQ + E S I +
Sbjct: 179 TVVDSDGNADEGVFTVRGL-----FHTGIPSYDQGSVLMPLAKAQAFARTERRASAIMIM 233
Query: 231 VKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ D A+ + + ++ WQ ++F ++
Sbjct: 234 LHDNQALVSVSAALRS---PDLQLLSWQDMNRLFLETMQT 270
>gi|328948951|ref|YP_004366288.1| hypothetical protein Tresu_2122 [Treponema succinifaciens DSM 2489]
gi|328449275|gb|AEB14991.1| protein of unknown function DUF214 [Treponema succinifaciens DSM
2489]
Length = 426
Score = 69.4 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 45/268 (16%), Positives = 95/268 (35%), Gaps = 9/268 (3%)
Query: 3 IFSRFEV--IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+ S F+ VA R N K + AS+++ +G+ +GVMALIV+MSVMNGF+ I
Sbjct: 1 MKSDFKWICFVARRISRINSKGR-TAAASYLAALGIALGVMALIVIMSVMNGFQMGFIDS 59
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
++ I+ + V K + + + VI LPF Q + G S +VR
Sbjct: 60 IMEISSYHVQVSKIQSDLFENWC----NKNKKVICALPFYEAQGLMVGNSEKQCASIVRA 115
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + + I+ ++ +
Sbjct: 116 VPENIMEVDFGFKDKLKIVAGKFNLSSADSIVVGSTLAYNLNLRIGSRVNIAALSGSSDT 175
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ ++ + V G+F + + ++ +++ + +A + +
Sbjct: 176 SLLSTNRQFVVKGIFHCGYAEINSSFAFINFDSGKKILG-NSAEEKYGIKLTSAQKDSSF 234
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + + W++ + +F
Sbjct: 235 IKEFKNVFPQS-KAVGWREYNRSYFGVL 261
>gi|315609075|ref|ZP_07884045.1| ABC superfamily ATP binding cassette transporter permease protein
[Prevotella buccae ATCC 33574]
gi|315249279|gb|EFU29298.1| ABC superfamily ATP binding cassette transporter permease protein
[Prevotella buccae ATCC 33574]
Length = 485
Score = 69.4 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 48/273 (17%), Positives = 95/273 (34%), Gaps = 12/273 (4%)
Query: 7 FEVIVAWRYLFS--NRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+A R +FS N K A I+ +GV IG+ ++V +SV+ GF+ + +V G
Sbjct: 73 LPFFLARR-IFSDDNGKRKVSRPAIRIATLGVAIGLAVMLVSVSVVLGFKHTIRDKVTGF 131
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFV-SGQAFVSGLSSGGSGVLVRGISN 123
H+ + + Q+ D + V++ + V Q + + G++
Sbjct: 132 GSHIQVADFMTLQMGEQYPVVMNDSMTSVLRNIKGVAHVQRYAVKQGIIKTDDDFLGVAF 191
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+S V+ R L + ++ + G
Sbjct: 192 KGVGPDFDSTFLHSNMVTGSIPRFSDTASSNRLLVSRIMADKLNLRCGQKVFAYFIDHNG 251
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHE 242
+R++ +T+ G++ YD M Y L + SG E+ + D D +++
Sbjct: 252 VRARRFTIAGIYETNLKRYDEVMCYTDLYTVVKLNGWEPDQASGAELTISDFDRLDEVSA 311
Query: 243 NIVRI-------LGNGVVVIDWQQRYQIFFSCY 268
+ R G + ++ FS
Sbjct: 312 RVTRKVNRTVDHYGETYSSANVKELNPQIFSWL 344
>gi|311744912|ref|ZP_07718697.1| membrane protein [Algoriphagus sp. PR1]
gi|126577415|gb|EAZ81635.1| membrane protein [Algoriphagus sp. PR1]
Length = 380
Score = 69.0 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/243 (15%), Positives = 92/243 (37%), Gaps = 6/243 (2%)
Query: 33 FIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPD 92
IGV +G MAL++VMSV NG + + + + I+ + +
Sbjct: 1 MIGVAVGTMALVIVMSVFNGLGDLIRGLFASFDAELKIEVVEGKSFEVTEDWLESIRQVE 60
Query: 93 VIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVII 152
+ +L V + + ++G+S + + + S ++G+ + D+ G I+
Sbjct: 61 GVAILTEVIEDNALFDYNGNQIVARLKGVSENFLDHGRFSKGYYWGDTTLGTDKNPGAIL 120
Query: 153 GKDLARNLGIS------IGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGM 206
G+ + L ++ +P + + + F +D+
Sbjct: 121 GRGVGFFLSVNLKDVNVPLKVFYPKAPRSAASIDPTQLYASGVLDPRAFFSIDRQFDDEY 180
Query: 207 VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFS 266
V L+ + N + + +E+ V++ +I++ + + +LG V + +++
Sbjct: 181 VIAPLEFTKNLLNYGDKRTALEIKVEEGASIDRVQDRVKALLGEKFSVKNADEQHAGILR 240
Query: 267 CYE 269
+
Sbjct: 241 TVK 243
>gi|154494027|ref|ZP_02033347.1| hypothetical protein PARMER_03372 [Parabacteroides merdae ATCC
43184]
gi|154086287|gb|EDN85332.1| hypothetical protein PARMER_03372 [Parabacteroides merdae ATCC
43184]
Length = 386
Score = 69.0 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 47/250 (18%), Positives = 82/250 (32%), Gaps = 11/250 (4%)
Query: 30 FISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDF 89
+S GV++ MAL+ +SV+NGF + + + + IQ + + D A R +
Sbjct: 1 MVSVCGVVVATMALVCALSVLNGFVGLVSSMLGNFDPELKIQPVHGKVFDPTLPAVR-EV 59
Query: 90 IPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKG 149
L Q + F L S + F
Sbjct: 60 KELPEVALFCEVLQDNAQVRYRDRQITATVKGVDDTFGRLTRIDSILVDSREGSFVLSDE 119
Query: 150 VIIGKDLARNLGISIGDKINILSP----------YGDVTPMGMGIRSKSYTVLGMFRMRF 199
V +L S+G + N P ++ + + V G++
Sbjct: 120 VANYANLGVGTAFSLGVRPNYADPLEIYAPKRNEKVNLANPVASLNLEYAFVGGVYATNQ 179
Query: 200 PDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQ 259
YD V + L + F+ E VS IE+ + I I +LG+ V D +
Sbjct: 180 QMYDENFVLLPLPMVRSLFDYEKEVSAIELSLVPGADINSVKSRIKSLLGDDFSVKDRYE 239
Query: 260 RYQIFFSCYE 269
+ + F +
Sbjct: 240 QQEASFRMMQ 249
>gi|187734695|ref|YP_001876807.1| protein of unknown function DUF214 [Akkermansia muciniphila ATCC
BAA-835]
gi|187424747|gb|ACD04026.1| protein of unknown function DUF214 [Akkermansia muciniphila ATCC
BAA-835]
Length = 541
Score = 69.0 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 1 MS--IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMI 58
M + + +A RYL N F SI + I +GV +GVM LIVV+SVM G ++++
Sbjct: 1 MKNLLSRYISLSLALRYL--NPLRTFFSIITLICLLGVSLGVMVLIVVLSVMGGLQKEIQ 58
Query: 59 KRVLGINGHVVIQQKYYPLVDYQFIANR 86
+ + HV + + V
Sbjct: 59 GNLFAHSPHVQVCYRNDFGVREVIPDWM 86
Score = 35.9 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 30/85 (35%), Gaps = 6/85 (7%)
Query: 191 VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAV-SGIEVFVKDPDAIEKTHENIVRIL- 248
+ + +++ L Q E+ V + + V+DP +E +++ L
Sbjct: 310 EVIGIYRASQHTPSPDLFIPLVIGQELLGYEDDVVQAVALRVEDPYHVETMLAPVMQALE 369
Query: 249 ----GNGVVVIDWQQRYQIFFSCYE 269
+ + W R+ +F +
Sbjct: 370 KEKPSSAWTLETWHDRFNAWFELMQ 394
>gi|331268886|ref|YP_004395378.1| lipoprotein releasing system transmembrane protein [Clostridium
botulinum BKT015925]
gi|329125436|gb|AEB75381.1| lipoprotein releasing system transmembrane protein, putative
[Clostridium botulinum BKT015925]
Length = 386
Score = 68.6 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 56/258 (21%), Positives = 112/258 (43%), Gaps = 20/258 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ VAWR+L + I S + + + I V I + + G ++ +++G H
Sbjct: 4 SMKVAWRFLMKRK------IQSIVIVLSIAIAVSVQIFIGLLSKGLERTLLFKIVGNAPH 57
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + K + D++ ++L + + L +++RG D S
Sbjct: 58 ITVYAKGGAIHDWKEKIDKLKLQNIKTIAVVPNVDTQGYAKLKDITEPIVIRGFVPQDAS 117
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ + Y F VI+G DL LG+S+GDKINI++P+G K
Sbjct: 118 KMYKIKDKIYEG--KLFKNDNEVILGSDLKERLGVSLGDKINIVTPWGKS---------K 166
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE--NAVSGIEVFVKDPDAIEKTHENIV 245
+ + G F + + V +L AQ + +L+ N + IE+ +K+ + +NI
Sbjct: 167 EFVITGFFDLGNIKLNKSWVMGTLTAAQDFSDLKKHNKIRSIEISIKNAYDVGSESKNIQ 226
Query: 246 RILGN-GVVVIDWQQRYQ 262
++L + + V +W+++ +
Sbjct: 227 KLLNDKNLKVENWKEQNK 244
>gi|330507372|ref|YP_004383800.1| lipoprotein-releasing system, ABC transporter permease
[Methanosaeta concilii GP-6]
gi|328928180|gb|AEB67982.1| lipoprotein-releasing system, ABC transporter permease protein
[Methanosaeta concilii GP-6]
Length = 395
Score = 68.6 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 38/267 (14%), Positives = 91/267 (34%), Gaps = 20/267 (7%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + +A R++ R+ F +S + V + V I+ S++NG ++ + V
Sbjct: 8 LLNPLPLTIALRHVIRRRRQTF------LSVLAVALAVSISIIFSSLINGQQQILTNLVE 61
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVI-KVLPFVSGQAFVSGLSSGGSGVLVRGI 121
HVV++ + + + + + + L++G
Sbjct: 62 EKLPHVVVEPREGEDFIHLYNSLLDRIVSQPGLRSTAASLSTPATLSRKDKTKNALLKGA 121
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
D + + + IG LA +L + +GDK+ P T +
Sbjct: 122 DPLDIDKIYKIQGSLVRGDFVSVQQDRNAAIGVKLADSLELKLGDKLLATFPRSRSTDLT 181
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ ++ T D+ + ++SL A+ + + + ++ +E+ + D
Sbjct: 182 VAAIFQTGTP----------LDDRVAFVSLDTARNFRDEGDVINAVEISLNDIRQSVSLA 231
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
I G W+++
Sbjct: 232 GLISSW---GYNARSWEEKNPEIMRAI 255
>gi|310822814|ref|YP_003955172.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Stigmatella aurantiaca DW4/3-1]
gi|309395886|gb|ADO73345.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Stigmatella aurantiaca DW4/3-1]
Length = 806
Score = 68.6 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
P G +++ + V G+F +YD VY+ L+EAQ +F ++ +GI++ V D D
Sbjct: 577 PTGPIPKNRVFRVAGIFYSGMYEYDAKFVYILLEEAQRFFEVKG-ANGIDLKVADIDNAR 635
Query: 239 KTHENIVRILG-NGVVVIDWQQRYQIFFSCY 268
+ ++VR LG DW + + FS
Sbjct: 636 RLAADVVRKLGGYPYRARDWSETNRNLFSAL 666
Score = 42.4 bits (97), Expect = 0.056, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 52/86 (60%)
Query: 20 RKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVD 79
R+ + + + +S GV +GVMALI+V+SVM+GF D+ K++LG + H V+ + L +
Sbjct: 367 REQSPTMMMTALSVGGVGVGVMALIIVLSVMSGFELDLQKKILGTHSHAVVSKYAGDLTE 426
Query: 80 YQFIANRLDFIPDVIKVLPFVSGQAF 105
Y + ++ +P VI PF++ Q
Sbjct: 427 YPKLMEQVAQVPGVIGQSPFITNQVM 452
>gi|115377120|ref|ZP_01464335.1| ABC transporter, permease protein [Stigmatella aurantiaca DW4/3-1]
gi|115365895|gb|EAU64915.1| ABC transporter, permease protein [Stigmatella aurantiaca DW4/3-1]
Length = 774
Score = 68.6 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
P G +++ + V G+F +YD VY+ L+EAQ +F ++ +GI++ V D D
Sbjct: 545 PTGPIPKNRVFRVAGIFYSGMYEYDAKFVYILLEEAQRFFEVKG-ANGIDLKVADIDNAR 603
Query: 239 KTHENIVRILG-NGVVVIDWQQRYQIFFSCY 268
+ ++VR LG DW + + FS
Sbjct: 604 RLAADVVRKLGGYPYRARDWSETNRNLFSAL 634
Score = 42.4 bits (97), Expect = 0.058, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 52/86 (60%)
Query: 20 RKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVD 79
R+ + + + +S GV +GVMALI+V+SVM+GF D+ K++LG + H V+ + L +
Sbjct: 335 REQSPTMMMTALSVGGVGVGVMALIIVLSVMSGFELDLQKKILGTHSHAVVSKYAGDLTE 394
Query: 80 YQFIANRLDFIPDVIKVLPFVSGQAF 105
Y + ++ +P VI PF++ Q
Sbjct: 395 YPKLMEQVAQVPGVIGQSPFITNQVM 420
>gi|212634592|ref|YP_002311117.1| hypothetical protein swp_1762 [Shewanella piezotolerans WP3]
gi|212556076|gb|ACJ28530.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
Length = 370
Score = 68.3 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/222 (17%), Positives = 77/222 (34%), Gaps = 2/222 (0%)
Query: 50 MNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGL 109
MNGF E++ R+LG+ H + P+ ++ I + +P ++ PFV Q +
Sbjct: 1 MNGFEEELENRLLGVVSHGELAGVNEPIQNWPSIIADANKVPGIVAAAPFVRMQGLIQKP 60
Query: 110 SSGGSGVLVRGI-SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKI 168
++ F S + +++GK LA +L +++G I
Sbjct: 61 GGFQGLTVLGIDGELEGKVSNIRDFMSEQSWNSLQDESKNNIVLGKGLADSLDVAVGQSI 120
Query: 169 NILSPYGDVTPMGMGIRSKSYTVLGM-FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGI 227
++ P +KS + + D Y+ + A L VSGI
Sbjct: 121 SLYMPNNSKQAQNKIAAAKSQRFVVSGIFKLGGELDTTTAYVPMAFAADLLKLGQGVSGI 180
Query: 228 EVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + ++ V + DW + + +
Sbjct: 181 RIKASNVFQAPMLIRDLGFSQQQYVYITDWTRTQGHLYQDIQ 222
>gi|297518204|ref|ZP_06936590.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli OP50]
Length = 53
Score = 68.3 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFRE 55
++ + + RY+ + F S++S IG+ +GVMAL+ V+SVMNGF
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFER 53
>gi|148255427|ref|YP_001240012.1| putative lipoprotein-releasing system transmembrane protein (lolC)
[Bradyrhizobium sp. BTAi1]
gi|146407600|gb|ABQ36106.1| Putative lipoprotein-releasing system transmembrane protein (lolC)
[Bradyrhizobium sp. BTAi1]
Length = 411
Score = 68.3 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/280 (15%), Positives = 86/280 (30%), Gaps = 24/280 (8%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ +AW ++ + + ++ GVM GV +++ ++M G ++D I+ ++
Sbjct: 1 MSLVLTIAWTHVRHRARQ------TLVAIAGVMTGVAFSVMMAAMMEGSQDDFIRTLVDA 54
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H+ I + +K G + G + ++ S
Sbjct: 55 LPHISITDELREPSRQPADQIYAAAEFHGLKPNVRRPGIKNPMATIASLQGWVPGALTAS 114
Query: 125 DFSY----------------LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKI 168
S + +++ +G + + L
Sbjct: 115 VQSKAVLRFAGRNLTVAIIGIDPRTENEVSTLASHMRQGSLNSLYRSSHAILLGDRLAAK 174
Query: 169 NILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIE 228
++T S + TV+G F F D Y+ L+ AQ+ ++ I
Sbjct: 175 LGARVNSNITLASAQGISMNATVVGTFHSGFRATDETTGYVLLRTAQILERQTGIINEIR 234
Query: 229 VFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ DP E I G I WQ+ + S
Sbjct: 235 IRTNDPMQARLISERIGEQ--TGYKAISWQEAQEDLLSAI 272
>gi|23014032|ref|ZP_00053872.1| COG4591: ABC-type transport system, involved in lipoprotein
release, permease component [Magnetospirillum
magnetotacticum MS-1]
Length = 448
Score = 67.9 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/278 (14%), Positives = 93/278 (33%), Gaps = 26/278 (9%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ +A +L ++ + +S +GV +GV I + ++M GF+ D I R++
Sbjct: 1 MLPLGLSIALTHLRHRQRQ------TLVSLLGVSLGVAFFIGISAMMQGFQRDFIARIID 54
Query: 64 INGHVVIQQKYYPLVDY------------------QFIANRLDFIPDVIKVLPFVSGQAF 105
+ H++++ + + + +++ L + G
Sbjct: 55 VQPHIIVKDEVRAAPQQAVERAFPDGAVSLRGLKPREEVRGIRGARNMLASLEEMPGVHV 114
Query: 106 VSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIG 165
LS + + + + R ++ D G + +
Sbjct: 115 APALSGNLLLRFGGKDVSVNVTGINPERERQVTHLEKDLLSGSLDALYTTSNAIIIGEGI 174
Query: 166 DKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVS 225
+ ++ + V+G+FR DN Y L++AQ+ N N ++
Sbjct: 175 AAKAGIRKDDLISAVSPVGVVLKMKVVGIFRSNITLIDNFETYTLLKKAQILQNRANIIN 234
Query: 226 GIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQI 263
+ + + D + I R G WQ++ +
Sbjct: 235 RLNLRLDDVEQAGTLAAAIERQFG--YRSEPWQEQSRN 270
>gi|325298070|ref|YP_004257987.1| hypothetical protein Bacsa_0922 [Bacteroides salanitronis DSM
18170]
gi|324317623|gb|ADY35514.1| protein of unknown function DUF214 [Bacteroides salanitronis DSM
18170]
Length = 415
Score = 67.9 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 53/279 (18%), Positives = 111/279 (39%), Gaps = 24/279 (8%)
Query: 7 FEVIVAWRYLFSN--RKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR---- 60
+++ +A R + + A I+ G+ IG+ +I+ ++V+ GF+ ++ +
Sbjct: 3 WKLFIARRIYKNKEEGERNVSKPAVRIAIAGIAIGLAVMIISVAVVIGFKHEVRDKVIGL 62
Query: 61 ---VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVL 117
+L + V + P+V + + L +P V V + + + + VL
Sbjct: 63 GSDILITSLDEVQSYQVTPIVGDDSLMSVLGAMPGVRHVQRYATKPGMIMTSDNFQGIVL 122
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
D ++L+ D V++ K +A LG+ +GDK++ ++
Sbjct: 123 KGVSQEYDLTFLKRHLLEGEIPAFADSVSSFQVLVSKTIADKLGVKVGDKLSTYYVENNI 182
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDA 236
R++ TV G+++ F YD+ + L+ N E V G+EV V D
Sbjct: 183 -------RARRLTVAGIYQTNFSSYDDLFLLTDLRTVVRLNNWKEGQVGGLEVSVSDYAR 235
Query: 237 IEKTHENIVRIL-------GNGVVVIDWQQRYQIFFSCY 268
+ +T+E ++ G ++ Y F+
Sbjct: 236 LNETNEQMLSFFYGKTDRYGGKYYSQTVEEVYPQIFAWL 274
>gi|217033721|ref|ZP_03439147.1| hypothetical protein HP9810_7g2 [Helicobacter pylori 98-10]
gi|216943770|gb|EEC23210.1| hypothetical protein HP9810_7g2 [Helicobacter pylori 98-10]
Length = 371
Score = 67.9 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 50/231 (21%), Positives = 90/231 (38%), Gaps = 2/231 (0%)
Query: 41 MALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFV 100
M LIV M++MNG ++ K++ +N + + + + + P+++
Sbjct: 1 MVLIVAMAIMNGMSKEFEKKLFVMNYPLTLYTTSPYGISEEVVQALEKKFPNLLFSPYLQ 60
Query: 101 SGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNL 160
+ S S G V S + + N ++ F +I+GK L +L
Sbjct: 61 TQSLIKSAHSMNGGVVFGVDFSKERRINEVLNDALKNTNENDLFKNPFNLIVGKSLRYSL 120
Query: 161 GISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL 220
+ + K ++ + T + + K +T+ G F YD +Y SLQ L
Sbjct: 121 NLDLNQKADLFFTELEPTGLTLSPIMKRFTIKGDFDSGLKSYDMSYMYTSLQAISAIRRL 180
Query: 221 E-NAVSGIEVFVKDP-DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
G+ V+ K P IE + I +G+ + W Q+ FFS E
Sbjct: 181 PLGLYDGVHVYSKTPMKDIENLRNALKTINHHGIGIEGWWQQNGNFFSAME 231
>gi|83594081|ref|YP_427833.1| hypothetical protein Rru_A2749 [Rhodospirillum rubrum ATCC 11170]
gi|83576995|gb|ABC23546.1| Protein of unknown function DUF214 [Rhodospirillum rubrum ATCC
11170]
Length = 409
Score = 67.9 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/282 (17%), Positives = 90/282 (31%), Gaps = 28/282 (9%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
F + VA RYL SN + + GV +GV+ + + ++ G R ++I + +G
Sbjct: 2 FALKVARRYLLSNPGQ------TLLLIAGVALGVIVFVFITGLIGGLRVELIAQTVGNLP 55
Query: 67 HVVIQQKYYPLVD-------------------YQFIANRLDFIPDVIKVLPFVSGQAFVS 107
HV ++ K P + + + + I +L V V
Sbjct: 56 HVTLEAKALPPREALPPREALALGETAKVLAAVEKTLDVPEQIRSWSPLLGIVEATPGVR 115
Query: 108 GLSSGGSGVLVRGI-SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGD 166
S G S L +++ + DL L
Sbjct: 116 VASPQIIGNAFATRGRASAALTLTGVLPERLSAIADIDGQLVAGEARLDLDSLLIGDKLA 175
Query: 167 KINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSG 226
L + +S+ + G+FR D Y+ L+ A+ +L +S
Sbjct: 176 DKLGLRIGSRLVLRADTGTERSFLIQGIFRTGVEALDERTAYLHLRAARTLLDLPYGISK 235
Query: 227 IEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
IE+ + D E ++ G+ W + + +
Sbjct: 236 IEIKLARLDDAEVVASHLGAA--TGLTATSWIAKNRRLYQAL 275
>gi|193213174|ref|YP_001999127.1| hypothetical protein Cpar_1529 [Chlorobaculum parvum NCIB 8327]
gi|193086651|gb|ACF11927.1| protein of unknown function DUF214 [Chlorobaculum parvum NCIB 8327]
Length = 423
Score = 67.5 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/277 (12%), Positives = 84/277 (30%), Gaps = 30/277 (10%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ AW +L ++ + ++ +GV +G +I ++V G + + +++ I H+
Sbjct: 7 LRFAWVHLRERKRQ------TLLTALGVAVGSAMMITTIAVARGSSQSVFIKLIDIAPHI 60
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
I + + ++ + + + + Y
Sbjct: 61 TIGADRVVPEVPDNLFGFIPGQIAFVRKNVTTDKKVVIKNYNQVVQTIKPITEIEDISPY 120
Query: 129 LQNSFSRFYGNVS---------------------NDFDRGKGVIIGKDLARNLGISIGDK 167
+ + N N + + + + +
Sbjct: 121 VTSKLLARNKNRYTPCFAKGVVPQLESGIANLKKNLLEPEALSELAWTSNGIILGELLAE 180
Query: 168 INILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSG 226
+ + + V+G F+ F + D Y++L AQ L N V+G
Sbjct: 181 KLKVKYRDTIMLVDKDGNEYPVMVVGRFKSGFNNKDKSEAYVNLALAQRMEALSSNTVTG 240
Query: 227 IEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQI 263
I + + D D ++ I ++ G W Q +
Sbjct: 241 IGLRIADIDKADELAARIQKM--TGYETESWSQANRN 275
>gi|330982241|gb|EGH80344.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 280
Score = 67.5 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 57/132 (43%)
Query: 138 GNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRM 197
G++ + GV++G AR +SIGDK+ ++ P P G+ R + TV+G+F++
Sbjct: 1 GSLEDLKPGEFGVVLGDITARRFRLSIGDKLTLIVPEVSSAPGGITPRMQRLTVVGIFKV 60
Query: 198 RFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDW 257
+ + AQ+ N V G+ + +KD + I LG G DW
Sbjct: 61 GAELDGSMGLINIADAAQMQRWQPNQVQGVRLALKDLYKAPQVSTPIAAGLGEGYRADDW 120
Query: 258 QQRYQIFFSCYE 269
FS +
Sbjct: 121 THTQGSLFSAMK 132
>gi|303240507|ref|ZP_07327023.1| protein of unknown function DUF214 [Acetivibrio cellulolyticus CD2]
gi|302591909|gb|EFL61641.1| protein of unknown function DUF214 [Acetivibrio cellulolyticus CD2]
Length = 388
Score = 67.5 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/268 (14%), Positives = 93/268 (34%), Gaps = 18/268 (6%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+A R+L SN + I + V I + +LI G ++ ++++ +G
Sbjct: 1 MSLGFRIATRFLKSNLGQTILIILGIAIGVSVQIFIGSLI------QGLQKGLVEKTIGS 54
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + I + ++ ++ Q + L G + +
Sbjct: 55 SSQITITSDQKDVRITEYGDLLEQLYSMDNRIRSISVAQDNPAFLVVGDNSQSLLVRGFE 114
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ +I+G DL I GD++ I +
Sbjct: 115 IDKADKIYKLYDRIVEGTYPKNENEIILGVDLKDEYSIKAGDEVVITTTNQKSVS----- 169
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKD--PDAIEKTHE 242
V+G F ++ + G +L+ +Q F +++S IE+ ++D A ++
Sbjct: 170 ----CKVVGFFDLKVTSLNTGWGITTLKTSQDLFETGDSISSIEMQLQDDAVFAADEIAS 225
Query: 243 NIVRILG-NGVVVIDWQQRYQIFFSCYE 269
I + + V++W+++ + S +
Sbjct: 226 EINGGIPKDKYKVVNWKEQNESLLSGLQ 253
>gi|307566341|ref|ZP_07628780.1| efflux ABC transporter, permease protein [Prevotella amnii CRIS
21A-A]
gi|307344918|gb|EFN90316.1| efflux ABC transporter, permease protein [Prevotella amnii CRIS
21A-A]
Length = 416
Score = 67.1 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/275 (14%), Positives = 89/275 (32%), Gaps = 11/275 (4%)
Query: 5 SRFEVIVAWRYLFSNRK--NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
F + VA + R N A I+ +GV IG+ +I+ +SV+ GF+ + +V+
Sbjct: 1 MNFSLYVARKIYTGGRGLNNKVSKPAIRIATLGVTIGLSVMIISVSVVLGFKNSIRDKVV 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSG-QAFVSGLSSGGSGVLVRGI 121
G H+++ Q+ + + + V + + + GI
Sbjct: 61 GFGSHIIVTNILNIDGAEQYPIAINKDLTRRLTQVDGVKKVERYAYTEGVLKTNSDFLGI 120
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ + + + I+ +++
Sbjct: 121 MLKGIGPEYDLSFIHENLREGNIPNFSDKKSQNKIVISETIAQKLNLHVGDKAFAYFLNR 180
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLY-FNLENAVSGIEVFVKDPDAIEKT 240
G+R + + + G++ +D+ + + L Q ++ G+E+ +KD + +
Sbjct: 181 QGVRMRYFKIAGIYATNMKQFDSQICFTDLYTTQKLNSWKDDQYGGVELLIKDFNNLHIE 240
Query: 241 HENI-------VRILGNGVVVIDWQQRYQIFFSCY 268
I N + +Y FS
Sbjct: 241 SNKISHLVKDRRDKYNNTYAASNIISQYPQIFSWL 275
>gi|15669701|ref|NP_248514.1| hypothetical protein MJ_1507 [Methanocaldococcus jannaschii DSM
2661]
gi|2496185|sp|Q58902|Y1507_METJA RecName: Full=Uncharacterized ABC transporter permease MJ1507
gi|1592141|gb|AAB99519.1| hypothetical protein MJ_1507 [Methanocaldococcus jannaschii DSM
2661]
Length = 399
Score = 66.7 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/241 (14%), Positives = 79/241 (32%), Gaps = 11/241 (4%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A++ + R S ++ IG++IGV+A++ ++S+ G + + + ++ + + +
Sbjct: 14 AFKNIKQKRTQ------SLLTIIGIVIGVLAMVSLISLGYGVQNYIHEEMMKMGSNKITI 67
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
I + V + G + +S +
Sbjct: 68 LPMKQFGVPPSHLFTKKEIKAIKNVKGVDTVMYGWYGGCEIEYNGEKKFVSYYYAIPSKL 127
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTV 191
+ R G + L + I+ K + V
Sbjct: 128 REVYKDSGYDIEEGRWLEDNDKYACVIGYGTAH-----NLFDREIKVGDVIKIKDKKFRV 182
Query: 192 LGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNG 251
+G+ + D+ + +++ + F E + I V VK+ + IEK E I + L
Sbjct: 183 VGILKQIGNQQDDNSIILNIDVGEKLFGNEGKYNFISVTVKEGEDIEKVSEEIKKALKKS 242
Query: 252 V 252
Sbjct: 243 F 243
>gi|288799957|ref|ZP_06405416.1| membrane protein [Prevotella sp. oral taxon 299 str. F0039]
gi|288333205|gb|EFC71684.1| membrane protein [Prevotella sp. oral taxon 299 str. F0039]
Length = 415
Score = 66.7 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 49/274 (17%), Positives = 94/274 (34%), Gaps = 10/274 (3%)
Query: 5 SRFEVIVAWR-YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ +A + Y K A I+ GV IG++ + + + V+ GF++ + +V+G
Sbjct: 1 MNLPLFLARKIYSTQKNKEHISRPAINIATAGVAIGIIIMTLSLCVVLGFKQTVKNKVIG 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSG-QAFVSGLSSGGSGVLVRGIS 122
G + + + D I VI+ V Q + + G++
Sbjct: 61 FGGDIQVTNFITLQTSESYPIQASDSIIKVIQKTNGVKHVQKYAFKQGILKTEKDFLGVT 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+S +S K+L + I+ K+N
Sbjct: 121 FKGVDQSFDSTFIANNLISGRIPHFSNKENTKELLISKSIANRLKVNTGDKIYAYFVDQS 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
GIR + + + G++ YD M + L N E + V+GIE+ +KD + +
Sbjct: 181 GIRVRPFLIAGIYETNLSQYDKIMCFTDLYNIIKLNNWESDQVTGIEIALKDFNQLNDVQ 240
Query: 242 ENIVRIL-------GNGVVVIDWQQRYQIFFSCY 268
N+ + G ++ FS
Sbjct: 241 ANLANKINKTVDNYGGTYATASIKEITPQIFSWL 274
>gi|237717205|ref|ZP_04547686.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262405973|ref|ZP_06082523.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|229443188|gb|EEO48979.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262356848|gb|EEZ05938.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
Length = 377
Score = 66.3 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/242 (16%), Positives = 82/242 (33%), Gaps = 8/242 (3%)
Query: 36 VMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIK 95
+ + +AL+ +SV NGF++ + + + I + + D Q R ++
Sbjct: 1 MALATLALVCTLSVFNGFQDMVASFFTAFDPQLKITVREGKVFDAQDERIRTVCALPEVE 60
Query: 96 VLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKG---VII 152
V + + + V+++G+ ++ + D + +
Sbjct: 61 VFTETLEENAMVQYKDRQAMVVLKGVEDNFEELTAIDSILYGAGEFVLHDSIVNYGVMGV 120
Query: 153 GKDLARNLGISIGDKINILSPYGDV-----TPMGMGIRSKSYTVLGMFRMRFPDYDNGMV 207
G+ D + + P + P R Y+ +F + +YD +
Sbjct: 121 ELVATLGTGLEFVDPLQVYLPKRNSKVNMANPGASFNRDYLYSPGVVFVVNQQEYDGKYI 180
Query: 208 YMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSC 267
SL + + VS +E+ +K I ILG+ VV + Q+ F
Sbjct: 181 LTSLGFLRQLLDYTTEVSAMELKLKPNVNTSSVQSKIENILGDDFVVQNRYQQQADVFRI 240
Query: 268 YE 269
E
Sbjct: 241 ME 242
>gi|311747349|ref|ZP_07721134.1| membrane protein [Algoriphagus sp. PR1]
gi|126579066|gb|EAZ83230.1| membrane protein [Algoriphagus sp. PR1]
Length = 405
Score = 65.9 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 39/265 (14%), Positives = 84/265 (31%), Gaps = 2/265 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+A R F R F + I+ + +G+ I+ V+ GF+ + +V G
Sbjct: 1 MNLSYFIAKRISF-KRAGGFSATIHKIAVGSLAMGLAVSILSFMVLGGFQTTVSDKVYGF 59
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
GH +Q+ + + LPFV + ++ G
Sbjct: 60 TGHYQVQRFTMSNAFEEAPFSLNSVFAQEYGQLPFVKKVQSFAHKAALIKGEDEVEGILV 119
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
F + + + + +
Sbjct: 120 KGISHDFDTLAFQKYIKEGRMLRVPEEGTSNEVLLSKNIANKLLVKVGDKLTFYFVQEPP 179
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHEN 243
R + V+G+F ++D +V LQ + ++ V G+EVFV+D I+
Sbjct: 180 RFRRVEVVGIFETYLENFDEKIVIGELQTIRNLNGWTKDQVGGLEVFVEDSKEIDSYSPQ 239
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCY 268
+ +++ + ++ + ++ F
Sbjct: 240 LEKVMDFDLKLVASKDKFLEIFDWL 264
>gi|325474498|gb|EGC77685.1| lipoprotein releasing system [Treponema denticola F0402]
Length = 448
Score = 65.9 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/281 (12%), Positives = 90/281 (32%), Gaps = 13/281 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFI--SFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+ + + +A+R+L + + + +G+ I ++ LIVV+ V +G + + R
Sbjct: 1 MKNLVFIKMAFRFLGIGSGKTVSNARKSLFGAVLGIGISIIPLIVVLVVSDGMIQGITSR 60
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSG-------- 112
+ + + + Y+ + +++ +
Sbjct: 61 TIELGTGHLQVINMRSISSYKNAETEKNVRSLILEFNEGNFVENAWIERQGNGLVIGKSG 120
Query: 113 GSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILS 172
SG +R + F+ + + + I +
Sbjct: 121 RSGGAIRAVEPEFFTQNIRALNLIKVISGSLEFENNKSAILGTAIAEKLGLKVGDTCRII 180
Query: 173 PYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK 232
R S+ + G+ + + D V++ L+E + ++++ I V K
Sbjct: 181 TISKNEKGKTIPRVSSFKISGLISSGYQELDALWVFIPLEEGLKIMPMSSSLTSIVVSTK 240
Query: 233 DPDAIEKTHE---NIVRILGNGVVVIDWQQRYQIFFSCYES 270
DP +K + IL + W + F+ +++
Sbjct: 241 DPFDDDKMQAIQLKLSSILPETFSIYSWADLNRSAFTSFKT 281
>gi|296242137|ref|YP_003649624.1| hypothetical protein Tagg_0397 [Thermosphaera aggregans DSM 11486]
gi|296094721|gb|ADG90672.1| protein of unknown function DUF214 [Thermosphaera aggregans DSM
11486]
Length = 404
Score = 65.9 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/252 (14%), Positives = 87/252 (34%), Gaps = 11/252 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ ++ + L + + ++ IG+ IG +ALI + SV +G+ +++ +LG+ ++
Sbjct: 7 IKLSTKNLSERKVR------AVLTIIGIAIGPLALITISSVTSGYGNYIVQSILGLGQNM 60
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
++ Q L I V+ PF S Q ++ + + SN
Sbjct: 61 IVVMPGQNYKLTQDDLELLKSIEGVVDATPFYSTQGEITIGGERKTVFIYGVDSNFLLQA 120
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ + + + + G I + G +
Sbjct: 121 IISLQVKEGTPPLETDIGKAMIGYSIAFDNSGARQYGIGDVISVTVYQIDEGGRIKVKRL 180
Query: 189 YTVLG----MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + + ++ ++ Q +++ +GI + ++P +++ I
Sbjct: 181 NVAVTAVLEKYGGAAFLNPDQTIFTPIETIQRMLGIKD-WTGILILAENPSQVDQVTAKI 239
Query: 245 VRILGNGVVVID 256
I G V VI
Sbjct: 240 REIYGGNVDVIS 251
>gi|323491225|ref|ZP_08096410.1| hypothetical protein VIBR0546_12367 [Vibrio brasiliensis LMG 20546]
gi|323314351|gb|EGA67430.1| hypothetical protein VIBR0546_12367 [Vibrio brasiliensis LMG 20546]
Length = 405
Score = 65.9 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/273 (13%), Positives = 87/273 (31%), Gaps = 23/273 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +AWR L+ N+ + I ++ G++ ++ +M+ M G M+ +
Sbjct: 3 IKLAWRNLWRNKLR------TAIMLGAIVFGLVGVVAMMAFMTGLVNSMLDNAIAWQTSH 56
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI------- 121
+ + + +D + ++ + + + G R
Sbjct: 57 IQIHNKAYVDNPDIKQRIVDSDRLIAQLDQQENIAHYSQRFIANGMVASARSTRGVRING 116
Query: 122 -SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + D V++ A+ L + +G K+ + +
Sbjct: 117 INIEQEQSVTPLAQHIIQGEWLDNQGRNPVLVSDKTAQQLKLRVGSKVVLTFSDLNGEVA 176
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G R + F+ +D G +Y+ + I + V D + +T
Sbjct: 177 GAAFRVRGV-----FKTPSTAFDEGNIYVRQTDLTALAG-GTGAHEIAIVVNQTDKLAET 230
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSC---YES 270
+ I G+ V DWQQ + S ++
Sbjct: 231 VHKLTAIAGDNNQVRDWQQVQPMLASMTNSMQT 263
>gi|149203639|ref|ZP_01880608.1| hypothetical protein RTM1035_06223 [Roseovarius sp. TM1035]
gi|149142756|gb|EDM30798.1| hypothetical protein RTM1035_06223 [Roseovarius sp. TM1035]
Length = 401
Score = 65.9 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 41/274 (14%), Positives = 92/274 (33%), Gaps = 20/274 (7%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+ + +A RYL +++ + + +GV +GV I + +++ G + ++ R +G
Sbjct: 3 YALKIAARYLTASKAQ------TALLVLGVAVGVFIFIFMSALIGGLAQFILSRTVGDIA 56
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIK--------VLPFVSGQAFVSGLSSGGSGVLV 118
HV I+ + + + + + ++ V G+ + +
Sbjct: 57 HVTIEAEPDDPTLLFTPEGHVLMVAERGRTRTASLAEAATWLPLIEAVPGVKAVSPQITG 116
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
G Q S + + G ++ G+ + + +
Sbjct: 117 AGFLTRGAQVEQVSVTGIEPGRESAILDLDGYMVEGRARLGAGLIVVGRELADDLDLSLN 176
Query: 179 PMGMGIRSKSYTV----LGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
S+ T G+F D ++SL A+ F + VS IE+ + D
Sbjct: 177 QPLRLQSSEGVTALLTLSGIFETGNGALDGARAFVSLSTARTLFAMPQGVSQIEIKLLDL 236
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+A + T I + G+ + W +
Sbjct: 237 NAADATALRIRTL--TGLDAVPWTDGAEQLMEAL 268
>gi|42527544|ref|NP_972642.1| lipoprotein releasing system, permease protein, putative [Treponema
denticola ATCC 35405]
gi|41818129|gb|AAS12553.1| lipoprotein releasing system, permease protein, putative [Treponema
denticola ATCC 35405]
Length = 448
Score = 65.9 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 34/281 (12%), Positives = 89/281 (31%), Gaps = 13/281 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFI--SFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+ + + +A+R+L + + + +G+ I ++ LIVV+ V +G + + R
Sbjct: 1 MKNLVFIKMAFRFLGIGSGKTVSNARKSLFGAVLGIGISIIPLIVVLVVSDGMIQGITSR 60
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSG-------- 112
+ + + + Y+ + +++ +
Sbjct: 61 TIELGTGHLQVINMRSISSYKNAETEKNVRSLILEFDEGNFVENAWIERQGNGLVIGKNG 120
Query: 113 GSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILS 172
SG +R + F+ + + + I +
Sbjct: 121 RSGGAIRAVEPEFFTQNIRALNLIKVISGSLEFENNKSAILGTAIAEKLGLKVGDTCRII 180
Query: 173 PYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK 232
R S+ + G+ + + D V++ L+E + ++++ I V
Sbjct: 181 TISKNEKGKTIPRVSSFKISGLVSSGYQELDALWVFIPLEEGLKIMPMSSSLTSIVVSTN 240
Query: 233 DPDAIEKTHE---NIVRILGNGVVVIDWQQRYQIFFSCYES 270
DP +K + IL + W + F+ +++
Sbjct: 241 DPFDEDKMQALQLKLNSILPESFSIYSWADLNRSAFTSFKT 281
>gi|320100818|ref|YP_004176410.1| hypothetical protein Desmu_0620 [Desulfurococcus mucosus DSM 2162]
gi|319753170|gb|ADV64928.1| protein of unknown function DUF214 [Desulfurococcus mucosus DSM
2162]
Length = 405
Score = 65.9 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 40/258 (15%), Positives = 90/258 (34%), Gaps = 11/258 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + ++ + L + + ++ IG+ IG MALI + SV +G+ + ++ ++
Sbjct: 1 MLASDILRLSVKTLSEKKLR------AILTIIGIAIGPMALITIGSVTSGYGDFIVNSIM 54
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++++ Q + L I V+ PF S Q + + + +
Sbjct: 55 GLGQNLIVVTPSRDYKLTQEDLDTLRSIEGVVDASPFYSTQGEIYVGGERKTVFIYGVDA 114
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
L + S V N + V P G
Sbjct: 115 EFILKALTSLTVMEGNPPSRSDIGKALVGYRIAFNDNGEREYDLGDVVAITVYQVQPGGK 174
Query: 183 GIRSKSYTVLGMFRMRF----PDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+ + ++ + +++S++ +++ SGI + + PD ++
Sbjct: 175 IQVKRLSVAVSGILSKYGGAAFLNPDQTIFVSMETVSKMLGVKD-WSGILLLAESPDRVD 233
Query: 239 KTHENIVRILGNGVVVID 256
E I + G V VI
Sbjct: 234 AVSEKIKEMYGGKVDVIS 251
>gi|237751491|ref|ZP_04581971.1| lipoprotein release transmembrane protein [Helicobacter bilis ATCC
43879]
gi|229372857|gb|EEO23248.1| lipoprotein release transmembrane protein [Helicobacter bilis ATCC
43879]
Length = 410
Score = 65.9 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 54/272 (19%), Positives = 110/272 (40%), Gaps = 12/272 (4%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+R + YL ++ FISI + ++F+GV +GVM L+V MS+MNG ++ ++ +
Sbjct: 4 TRLITFILRHYLKFDKTQPFISITAILAFLGVGVGVMVLLVTMSIMNGMIKEFEHKLFIM 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N + I + + + + P + S + + + +
Sbjct: 64 NYPITIFATSNRGLSKELLEYLEEKFPKLKF-----SPYMQTQAVIRMNAEIYPLVVYAI 118
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
D +N Y + + +F +I+G+ +LG++ +K+ ++ T + +
Sbjct: 119 DLEREKNVNKVLYESRTKEFSNTFNLIMGETFYYSLGLNKDEKVTLIFTELAPTGIALTP 178
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDP-DAIEKTHE 242
+ K + + G F +YDN +VY + + Q + N G +F +P IE
Sbjct: 179 KMKKFGIDGTFTSGLRNYDNSIVYTTFEALQALRGVGNGAYEGFHIFSNEPMKDIESIRL 238
Query: 243 NIVRILGNG-----VVVIDWQQRYQIFFSCYE 269
I + W ++ FF+ E
Sbjct: 239 AIESYMKESGNIVHAEAQGWWEQNGNFFAAME 270
>gi|118590670|ref|ZP_01548071.1| hypothetical protein SIAM614_05868 [Stappia aggregata IAM 12614]
gi|118436646|gb|EAV43286.1| hypothetical protein SIAM614_05868 [Stappia aggregata IAM 12614]
Length = 411
Score = 65.6 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 34/275 (12%), Positives = 81/275 (29%), Gaps = 24/275 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A ++ + + + +S +GV +GV + + S+M G + D ++ HV
Sbjct: 4 LRIASTHIRNRLRQ------TIVSTLGVALGVGFSVAMASLMEGSQRDFTATLIDAIPHV 57
Query: 69 ----------------VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSG 112
V Y + + + + + L + LS
Sbjct: 58 EILDEQRAPAEQPASAVYDAVTYHGLRPKEDLRGIRNPTEALASLRDWVNGSMAQRLSGQ 117
Query: 113 GSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILS 172
++ + D +G + + +
Sbjct: 118 AVLRYAGQDIGMTLVGVEPKRELNVSKIGEDMRQGAFEDLDTTSNGLVIGDKAAERLGAE 177
Query: 173 PYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK 232
VT +K + ++G+F D G+ Y L+ Q+ + ++ I + +
Sbjct: 178 LGDTVTLTSANSVAKRFKIVGLFHSGITTSDEGLAYAPLKAVQILLEKPDIINSIAIHLN 237
Query: 233 DPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSC 267
+ R LG + W++ +
Sbjct: 238 AIGEANEVAARAERQLG--YKAVSWEEANEGLMEA 270
>gi|42527546|ref|NP_972644.1| lipoprotein releasing system, permease protein, putative [Treponema
denticola ATCC 35405]
gi|41818131|gb|AAS12555.1| lipoprotein releasing system, permease protein, putative [Treponema
denticola ATCC 35405]
Length = 426
Score = 65.6 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 43/263 (16%), Positives = 91/263 (34%), Gaps = 9/263 (3%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
R+ V R+ ++ K SI++ S +G+ GVM L V++S+MNG + I +L ++
Sbjct: 7 RWIFFVLNRFNSADTKGR-SSISTLFSILGIAFGVMVLTVILSIMNGLQMGYIDTILQVS 65
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+ L + + + F Q + G GVL+R +
Sbjct: 66 SGHIR------LYGEKEDLKEAENLNLHKAFFIFQESQTLMQGNYGKQHGVLIRSVEEDI 119
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ S + K +I + + +
Sbjct: 120 MQKDKGLASALKITSGSFNILEKDSVILGYELARQLGVKVGDNVNIIAVSGSSETSLFPE 179
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V G+F+ + + D+ +MSL+ + F E+ + V +++ + ++
Sbjct: 180 NQDLIVTGIFKTGYYEVDSSFAFMSLENGENLFGKESKLYA-SVKLQNQNNDAAYISSLN 238
Query: 246 RILGNGVVVIDWQQRYQIFFSCY 268
+ W+ FF
Sbjct: 239 AS-SLNLKAESWRTYNHAFFGAL 260
>gi|312129945|ref|YP_003997285.1| hypothetical protein Lbys_1212 [Leadbetterella byssophila DSM
17132]
gi|311906491|gb|ADQ16932.1| protein of unknown function DUF214 [Leadbetterella byssophila DSM
17132]
Length = 401
Score = 65.6 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 33/266 (12%), Positives = 87/266 (32%), Gaps = 7/266 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+A R + ++ +F + + + V I V +++ V+ GF+ + +++
Sbjct: 1 MNISYFIANR-IRKSKGQSFSRVIVKVGVLSVAITVSVIVLSFFVLLGFKNTIKEKLFSQ 59
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H+ + + + +K LP V V+++
Sbjct: 60 TSHIQVSKITLNRSFEETPLPNNSDYYQKVKNLPHVKS-----INRVAYKSVILKSEEEI 114
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ L+ + + + + + + G + V +
Sbjct: 115 TGAVLKGVDQEYDWSEMKNNLVEGKTVDSLNQIMISKRTAGILNVKVGESLYVYFIQDPP 174
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTHEN 243
R++ V+G++ + D V L Q EN ++++KD ++ +
Sbjct: 175 RARKVEVVGIYDTHVEELDQLYVLSDLGLIQRINAWENGEFGHYDIYLKDLSSLPTVKKE 234
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
++ I V ++ FF ++
Sbjct: 235 LMEIFPLEYKVTQVEELLPHFFEWFK 260
>gi|89890177|ref|ZP_01201688.1| putative ABC transporter, permease component [Flavobacteria
bacterium BBFL7]
gi|89518450|gb|EAS21106.1| putative ABC transporter, permease component [Flavobacteria
bacterium BBFL7]
Length = 415
Score = 65.2 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 49/274 (17%), Positives = 105/274 (38%), Gaps = 10/274 (3%)
Query: 5 SRFEVIVAWR-YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
E +A R + KN+ + I+ + IGV+ +++ ++ G ++ + ++V
Sbjct: 1 MNLEYFIAKRVQSSAAYKNSVSAPIIKIAIAAIAIGVIVMLIAIATGVGLQKKIKEKVSA 60
Query: 64 INGHVVIQQKYYPLVD--------YQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSG 115
NGH I +Q +P+V V + +
Sbjct: 61 FNGHASISLYDRNNSITTVKPISIHQDFYPDFVSVPEVTHVQAVATLGGMIRTEKDFEGI 120
Query: 116 VLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYG 175
+L ++ D+SY + + + ++I D+AR L + +GDK
Sbjct: 121 ILKGVGTDYDWSYFKGFLVDGALPDMTLENATREILISDDIARRLQLKVGDKAPTYFVKP 180
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN-AVSGIEVFVKDP 234
+ + G S+ +T+ G++ +YD + ++ Q E+ + EVF+ D
Sbjct: 181 NASSNGNPTISRGFTISGIYDSGLEEYDTKFIIGDIRHIQKINKWEDDQIGKFEVFIDDF 240
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
D +++ I + + + +Q+Y FS
Sbjct: 241 DNLDQLGVKIFQNTDSLLNSQTIKQQYPTIFSWL 274
>gi|78484780|ref|YP_390705.1| hypothetical protein Tcr_0435 [Thiomicrospira crunogena XCL-2]
gi|78363066|gb|ABB41031.1| Lipoprotein-releasing system transmembrane protein (LolC) family
protein [Thiomicrospira crunogena XCL-2]
Length = 431
Score = 65.2 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 44/282 (15%), Positives = 94/282 (33%), Gaps = 15/282 (5%)
Query: 3 IFSRFEV--IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMS-VMNGFREDMIK 59
IF+R + +AWR ++ NR + ++I++ + ++I AL+ MS M + D+
Sbjct: 5 IFNRLTLLQFIAWRNIWRNRVRSSLTISALAGGLIMLILYAALLEGMSRQMVTYATDISS 64
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
L ++ I + L+ +++ P + A S + ++
Sbjct: 65 SHLQMHRSAYIDDQDIYATIPWSYLTALENSSLPVEMAPRLYAAALASSKDNSTGVMIKA 124
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + G S + G+ L
Sbjct: 125 IDPQRERHVTKLLTHMRSGKASFTPIQKNGLTHYPVLIGAQLARNLQLSPGSELVLVTQA 184
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+ I + + V G+ R P++D V MS++ Q E+ + + + D +
Sbjct: 185 IDGSIGNALFEVTGILRPLEPNFDRMGVLMSIKAYQSLMYQEDGFHELAIKTHNIDHLNT 244
Query: 240 THENIV------------RILGNGVVVIDWQQRYQIFFSCYE 269
+ + LG VV+ +W++ E
Sbjct: 245 LQKQLEMQIAQLQQRNPLDALGGNVVIRNWKELNPPVADMLE 286
>gi|294341595|emb|CAZ90012.1| Putative ABC-type antimicrobial peptide transport system, permease
component [Thiomonas sp. 3As]
Length = 400
Score = 65.2 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 47/277 (16%), Positives = 89/277 (32%), Gaps = 21/277 (7%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
R +A ++L R S + IG+ +G ++ + +++ G + +++ R LG
Sbjct: 1 MRLSWNIALQFLRDGRAQ------SLLILIGIAVGSAVIVFITALVTGLQGNIVNRTLGS 54
Query: 65 NGHVV------------IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSG 112
+V L RL I + VL + V +
Sbjct: 55 QPQIVVKAPDLVPLTPPPAPDTTYLSRIDPRPQRLRGIDNAAAVLHAIRTMPDVKAATPV 114
Query: 113 GSGVLVRGI-SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL 171
SG + + Y ++ + L S L
Sbjct: 115 VSGPAFAQRGNAVRAVAILGIEPSSYVHIIPINTDIVAGQFAVGAEKILIGSRLASDLGL 174
Query: 172 SPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFV 231
S + G +++++ V G+F + D D VY+ LQ+AQ L + + I++ V
Sbjct: 175 SIGDTLRLTGPSGQAQAFRVAGIFTIGVRDVDERQVYLGLQQAQTLLGLPGSTTEIDLSV 234
Query: 232 KDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
D + + I R V W +
Sbjct: 235 HDLFSAQAIAARIARTF--DVKAESWMTTNSQLLNAL 269
>gi|258647979|ref|ZP_05735448.1| putative membrane protein [Prevotella tannerae ATCC 51259]
gi|260851821|gb|EEX71690.1| putative membrane protein [Prevotella tannerae ATCC 51259]
Length = 418
Score = 65.2 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 47/284 (16%), Positives = 107/284 (37%), Gaps = 27/284 (9%)
Query: 5 SRFEVIVAWRYLF---SNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+ +A R+ +KN + A ++ G+ +G+ +IV + V+ GF+ ++ R+
Sbjct: 1 MNLSLFLAKRFFSAGDRQQKNRASTPAIIVATSGIAVGLAVMIVSVCVVLGFKSEISYRL 60
Query: 62 LGINGHVVIQQKY-------YPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
G H+ + YP+V I +L +P++ + F Q + + +
Sbjct: 61 TGFGSHLEVFDTNALASPESYPVVTEGEIVQKLQQLPEIAHLQRFSEKQGILKTTNDFQA 120
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
VL + D S+L+ + + + I + + L + +GD
Sbjct: 121 VVLKGLGEDYDVSFLKRCLVAGHLPKFSATKSTNEIAISRTQSDLLNLHVGD-------L 173
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKD 233
I+ + + ++G++ +D + + SG+E+ VKD
Sbjct: 174 VYAYFFENTIKMRRFKIVGIYNTNMKQFDRSFALTGKAVVNRLNDWQPDQSSGLELRVKD 233
Query: 234 PDAIEKTHENIVRIL-------GNGVVVIDWQQ--RYQIFFSCY 268
A+++ + R++ G V+ ++ R F+
Sbjct: 234 FSALDQATRRVGRLVNGRKDKNGASYAVMSIKENPRTASVFNWL 277
>gi|330942638|gb|EGH45210.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. pisi str. 1704B]
Length = 150
Score = 65.2 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 1/151 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V + RY + R+N F+S S S IG+ +GV+ +IVV+SVMNGF +M RVL
Sbjct: 1 MFRPLFVFIGTRYTRAKRRNHFVSFISLTSMIGLALGVVVMIVVLSVMNGFDHEMRTRVL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ H I + P+ D++ +A ++ P V+ V PF Q ++ +L
Sbjct: 61 GMVPHATI-ESADPITDWRGLATKVQENPQVLAVAPFTQMQGLLTHDGKVQKVLLNGIDP 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIG 153
+ G + + G++IG
Sbjct: 120 LEERKVSIIDHFIKQGQLDSLSPGSFGIMIG 150
>gi|282879845|ref|ZP_06288572.1| efflux ABC transporter, permease protein [Prevotella timonensis
CRIS 5C-B1]
gi|281306239|gb|EFA98272.1| efflux ABC transporter, permease protein [Prevotella timonensis
CRIS 5C-B1]
Length = 415
Score = 65.2 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 51/280 (18%), Positives = 108/280 (38%), Gaps = 22/280 (7%)
Query: 5 SRFEVIVAWR-YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ ++ R Y K A I+ IGV IG+ +++ + V+ GF+ + +V+G
Sbjct: 1 MNLPLFLSKRIYQEQGDKQKVSKPAIRIATIGVGIGLAVMLISVCVVFGFKHAVSNKVIG 60
Query: 64 INGHVVIQQKY-------YPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
H+ + YP+ + L P V V F + Q + S V
Sbjct: 61 FGSHIQVANFMTLQTSESYPIQMGDSMIQVLKKCPGVDHVQRFANKQGVLKTDSDFLGVV 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
+ D ++++++ + +D +++ K +A+ L + +G++I +
Sbjct: 121 FKGVGPDFDSTFIKHNLVEGHIPAFSDKKSSNQILLSKSMAQKLQLKLGNRIFAYFIDDN 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPD 235
+R + + + G+++ YD+ Y+ L A E + V+G E+ VKD
Sbjct: 181 G------VRVRRFKIAGIYQTNLAQYDDVTCYIDLYTAVKLNGWETDQVTGAEITVKDFQ 234
Query: 236 AIEKTHENIVR-------ILGNGVVVIDWQQRYQIFFSCY 268
++ T +++ G + FS
Sbjct: 235 QVDMTANYLIQNVNRSVDQYGETYSSKTIRDISPQIFSWL 274
>gi|218514112|ref|ZP_03510952.1| probable lipoprotein ABC transporter, permease protein [Rhizobium
etli 8C-3]
Length = 222
Score = 65.2 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 42/71 (59%)
Query: 199 FPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQ 258
+YD+ +++M L+E+QL+FN E V IE+FV PD I+ + G + + DW+
Sbjct: 4 MSEYDSSIIFMPLEESQLFFNAEGLVQSIELFVDHPDDIDALRSKVEEAAGRQIHLTDWR 63
Query: 259 QRYQIFFSCYE 269
QR Q FFS +
Sbjct: 64 QRNQTFFSALQ 74
>gi|296137291|ref|YP_003644533.1| protein of unknown function DUF214 [Thiomonas intermedia K12]
gi|295797413|gb|ADG32203.1| protein of unknown function DUF214 [Thiomonas intermedia K12]
Length = 400
Score = 64.8 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 48/277 (17%), Positives = 90/277 (32%), Gaps = 21/277 (7%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
R +A ++L R S + IG+ +G ++ + +++ G + +++ R LG
Sbjct: 1 MRLSWNIALQFLRDGRAQ------SLLILIGIAVGSAVIVFITALVTGLQGNIVNRTLGS 54
Query: 65 NGHVV------------IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSG 112
+V L RL I + VL + G V +
Sbjct: 55 QPQIVVKAPDLVPLTPPPAPDTTYLSRIDPRPQRLRGIDNAAAVLHAIRGMPDVKAATPV 114
Query: 113 GSGVLVRGI-SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL 171
SG + + Y ++ + L S L
Sbjct: 115 VSGPAFAQRGNAVRAVAILGIEPSSYVHIIPINTDIVAGQFAVGAEKILIGSRLASDLGL 174
Query: 172 SPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFV 231
S + G +++++ V G+F + D D VY+ LQ+AQ L + + I++ V
Sbjct: 175 SIGDTLRLTGPSGQAQAFRVAGIFTIGVRDVDERQVYLGLQQAQTLLGLPGSTTEIDLSV 234
Query: 232 KDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
D + + I R V W +
Sbjct: 235 HDLFSAQAIAARIARTF--DVKAESWMTTNSQLLNAL 269
>gi|307719907|ref|YP_003875439.1| permease of an ABC transporter system [Spirochaeta thermophila DSM
6192]
gi|306533632|gb|ADN03166.1| permease component of an ABC transporter system [Spirochaeta
thermophila DSM 6192]
Length = 409
Score = 64.8 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/271 (16%), Positives = 95/271 (35%), Gaps = 21/271 (7%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+ +R + NR+ S + +G+ IG LI M + G+ + + ++ + +
Sbjct: 5 WLGYRNVLRNRRR------SILMLLGLSIGTALLIFGMGWVRGYFTTVYRNIIDFDTGHI 58
Query: 70 IQQKYYP---------LVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + + V + LS G V VR
Sbjct: 59 QVYHPDFLEEEVRTPLEYSIEDYRGWRARLASLPGVAVAAGRIEVPARLSWRGRQVYVRL 118
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + G+++GK+LA LG+ +GD I + V
Sbjct: 119 RGIDPPEEARLTTIEGAVVEGAFLVGRSGLLLGKELADRLGVGVGDPIAV-----RVMDR 173
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ V G+F +P D M +M L+ Q ++ + V+ + + ++ P +EK
Sbjct: 174 YGVENVDVFPVQGLFSFGYPVMDRNMAFMDLESLQRLLDMGDGVTHLVIRLEPPLPVEKG 233
Query: 241 HENIVRIL-GNGVVVIDWQQRYQIFFSCYES 270
+ L G+ W++ + + ++
Sbjct: 234 LLLVSSALEGSPYRAYRWEEFAKALVAAVQA 264
>gi|226355760|ref|YP_002785500.1| hypothetical protein Deide_08710 [Deinococcus deserti VCD115]
gi|226317750|gb|ACO45746.1| conserved hypothetical protein, precursor; putative membrane
protein [Deinococcus deserti VCD115]
Length = 395
Score = 64.8 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/242 (15%), Positives = 72/242 (29%), Gaps = 13/242 (5%)
Query: 30 FISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDF 89
++ +G+ +GVMALI +S+ NGF ++ L + H+ + D + D
Sbjct: 30 VLTILGIAVGVMALIAALSLTNGFTAALVDATLRASPHLSMSAFTPSGRDAELERAMRDD 89
Query: 90 IPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKG 149
+ S G + S G
Sbjct: 90 GRVQAFTPFLADKGLLTTPASPGRRAGVDFATLFGVPSTGARVLRLPAPGNVLLATLKDG 149
Query: 150 VIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYM 209
++ S + +V +G R V G+F D+ +
Sbjct: 150 EVL--------LGSALARNVSAFTGDEVRLLGSTQRRTVLKVKGVFTTGNYLIDSAYAFT 201
Query: 210 SLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFS--C 267
+L+ Q N ++G +V + DP +++ R + WQ Y
Sbjct: 202 NLKTLQELQKTRN-ITGYQVRLHDPQQAVALGDDLSRA--RAYAPLPWQSLYGTLLEQLA 258
Query: 268 YE 269
+
Sbjct: 259 LQ 260
>gi|330947812|gb|EGH48230.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. pisi str. 1704B]
Length = 119
Score = 64.8 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 2/105 (1%)
Query: 166 DKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLENAV 224
DK+ ++P VTP GM R K + V G+F + + D + +L + N V
Sbjct: 11 DKLTFVAPEVTVTPAGMFPRMKRFEVTGIFHVGAGEIDGFLGLTNLDDLGRLHRWKPNQV 70
Query: 225 SGIEVFVKDPDAIEKTHENIVRILG-NGVVVIDWQQRYQIFFSCY 268
G+ + D A +T I + LG N DW + + +
Sbjct: 71 QGLRLKFDDLFAAPRTSWEIAQKLGENNFYSRDWTRTHGNLYQAI 115
>gi|289192003|ref|YP_003457944.1| protein of unknown function DUF214 [Methanocaldococcus sp.
FS406-22]
gi|288938453|gb|ADC69208.1| protein of unknown function DUF214 [Methanocaldococcus sp.
FS406-22]
Length = 395
Score = 64.8 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/241 (14%), Positives = 79/241 (32%), Gaps = 11/241 (4%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A++ + R S ++ +G++IGV+A++ ++S+ G + + + ++ I + +
Sbjct: 10 AFKNMKQKRTQ------SLLTIVGIVIGVLAIVSLISLGYGVQNYIHEEMMKIGSNKITI 63
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
+ + KV + G + +S +
Sbjct: 64 LPMKQFGVPPSHYFTKKEVKAIKKVKGVDTVMYGWYGGCEIEYNGEKKFVSYYYAIPSKL 123
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTV 191
+ R G + + I+ K + V
Sbjct: 124 REVYKDSGYDIEKGRWLEDNDKYACVIGYGTAHNLFNR-----EIKVGDVIKIKDKKFRV 178
Query: 192 LGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNG 251
+G+ + D+ + +++ + F E + I V VK+ + IEK E I + L
Sbjct: 179 VGILKQVGNQQDDNSIILNIDVGEKLFGNEGEYNFISVTVKEGEDIEKVSEEIKKALKKS 238
Query: 252 V 252
Sbjct: 239 F 239
>gi|21674420|ref|NP_662485.1| lipoprotein releasing system [Chlorobium tepidum TLS]
gi|21647603|gb|AAM72827.1| lipoprotein releasing system [Chlorobium tepidum TLS]
Length = 423
Score = 64.8 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/285 (14%), Positives = 94/285 (32%), Gaps = 32/285 (11%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M+ F AW +L ++ + ++ +GV +G +I ++V G ++ +
Sbjct: 1 MTFLDHFRF--AWVHLRERKRQ------TSLTVLGVAVGSAMMITTIAVARGSSLNVFLK 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLD--------FIPDVIKVLPFVSGQAFVSGLSSG 112
++ + H+ I + + + KV+ Q +
Sbjct: 53 LIDVAPHITIGADRVVPEVPDNLVGMMQGRIAFVRKNVTTDRKVVIKNYSQVIATVSPMR 112
Query: 113 GSGVLVRGISNSDFSYLQNSFSRFY-------------GNVSNDFDRGKGVIIGKDLARN 159
+ +++ + +N F+ + G N D +G
Sbjct: 113 EVVDISPYVTSKLLARNKNRFTSCFAKGVVPSLEGEIAGLKKNLLDPEALTELGWTPNGI 172
Query: 160 LGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFN 219
+ S+ + + + + V+G FR F D+ Y++L AQ +
Sbjct: 173 ILGSMLAEKLKVKYRDTIMLVDKEGHEYPVMVVGRFRSGFNTKDDKEAYVNLALAQRMES 232
Query: 220 L-ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQI 263
L N V+GI + + + + I ++ G W + +
Sbjct: 233 LASNTVTGIGLRIANIGQADALAARIQKL--TGYETKSWSESNKN 275
>gi|29346885|ref|NP_810388.1| ABC transporter permease [Bacteroides thetaiotaomicron VPI-5482]
gi|29338783|gb|AAO76582.1| ABC transporter, permease protein [Bacteroides thetaiotaomicron
VPI-5482]
Length = 385
Score = 64.4 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 52/251 (20%), Positives = 96/251 (38%), Gaps = 22/251 (8%)
Query: 33 FIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV-------VIQQKYYPLVDYQFIAN 85
G+ IG+ +I+ ++V+ GF+ ++ +V+G H+ V + +P+ +
Sbjct: 1 MAGIAIGLAVMIIAVAVVIGFKSEVRNKVIGFGSHIQIANLDAVNSYETHPIAVGDSMMT 60
Query: 86 RLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFD 145
L P V V + + + + VL D S++Q +D
Sbjct: 61 ALSGYPQVSHVQRYSTKPGMIKTDDAFQGMVLKGVGPEFDPSFMQEYLVEGEIPAFSDSA 120
Query: 146 RGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNG 205
V+I K LA + + +GDKI ++ R++ T+ G+++ F +YDN
Sbjct: 121 SSNQVLISKALATKMKLKLGDKIYTYYIQDNI-------RARRLTIAGIYQTNFSEYDNL 173
Query: 206 MVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHENI-------VRILGNGVVVIDW 257
+ L VSG+E+ V+D D +E I G V +
Sbjct: 174 FLLTDLYLVNRLNGWEPEQVSGVELQVRDYDKLEDITYEIAVDTDSQRDKFGGVYYVRNI 233
Query: 258 QQRYQIFFSCY 268
+Q F
Sbjct: 234 EQLNPQIFEWL 244
>gi|77955896|gb|ABB05516.1| lipoprotein releasing system transmembrane protein [Bartonella sp.
bat53]
Length = 110
Score = 64.4 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 61/91 (67%)
Query: 13 WRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQ 72
+R + ++ + S+ S IS IG+M+GV AL+VVM+VMNGFR +++ R+LG+NGH+++Q
Sbjct: 11 FRRVSPHKIHVVASVISIISLIGIMLGVFALVVVMAVMNGFRTELLNRILGMNGHLIVQA 70
Query: 73 KYYPLVDYQFIANRLDFIPDVIKVLPFVSGQ 103
+ DY+ + + L+ + + LP + GQ
Sbjct: 71 VHSSFSDYKTLISSLESVDGIKFSLPVIEGQ 101
>gi|194335570|ref|YP_002017364.1| protein of unknown function DUF214 [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308047|gb|ACF42747.1| protein of unknown function DUF214 [Pelodictyon phaeoclathratiforme
BU-1]
Length = 422
Score = 64.4 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/287 (14%), Positives = 84/287 (29%), Gaps = 32/287 (11%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +A R+L R+ + + +GV + M LI S+ G + ++ ++
Sbjct: 1 MLKTL-FSIAVRHLLGRRRQ------TLTTILGVAVSTMVLITTNSLTRGLLDSFVETIV 53
Query: 63 GINGHVVIQQKYYPLVDYQFI--------ANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
+ H+ ++ + + A + I + Q S
Sbjct: 54 NVAPHITLKGESMRPMPVNLFEEERSLSVAFVDNNIKKLDPEEVRNYRQILTVFSSPTYE 113
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
++ + SR V + I + +I +
Sbjct: 114 KKILAASPYVLSQVMAVKGSRNQPLVLKGVLIEREDAISGIGKKLTQGNIALFEKTPNAL 173
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDN--------------GMVYMSLQEAQLYFNL 220
+ + K ++ + V++SL+ AQ+ L
Sbjct: 174 LVGRTVARDMNLKMNDLVVIIPSSGKSRQCKVAGIFFSGVNAVDNSVFVSLKLAQIIEGL 233
Query: 221 E-NAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFS 266
N V+GI + V DP + RI G + WQ+ S
Sbjct: 234 PANKVTGIALKVADPFVNAALASELERI--TGYRCLTWQEENASILS 278
>gi|33519853|ref|NP_878685.1| ABC transporter integral membrane subunit [Candidatus Blochmannia
floridanus]
gi|33504198|emb|CAD83460.1| ABC transporter integral membrane subunit [Candidatus Blochmannia
floridanus]
Length = 416
Score = 64.4 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 59/268 (22%), Positives = 113/268 (42%), Gaps = 5/268 (1%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+ +A R+ S ++N IS+ SFIS I + IG+ I+V+S++NGF ++ R+L +
Sbjct: 3 LSLRIALRFHQSFKRNTLISLISFISIIIIAIGISTAILVLSIINGFEFELNHRILSVVP 62
Query: 67 H-VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
H + + V+++ I N + IP++I P++ + + + +++
Sbjct: 63 HGEITKSANISFVNWKKILNCIKKIPNIIYTNPYIRLSGVIEYNNQWHVVYIKSIDLSNN 122
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVII--GKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ ++ F S + I G+ +A L I GD I IL + +
Sbjct: 123 INIYNHTLINFIEKKSWKYFCEHKNQIILGEGVAIALNIREGDWITILFANNFHSEKRLL 182
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ K+Y + DN + +S + Q Y N + + GIE V + I + E
Sbjct: 183 LLKKAYVQVSGILKLHSQLDNNLAIISFSDIQKYSNNKLDIDGIEFSVNNAFDIGRIIEI 242
Query: 244 IVRIL--GNGVVVIDWQQRYQIFFSCYE 269
I + + V W Y + +
Sbjct: 243 IKCKIRENENIQVHSWMDIYGYIYRDIQ 270
>gi|261403252|ref|YP_003247476.1| protein of unknown function DUF214 [Methanocaldococcus vulcanius
M7]
gi|261370245|gb|ACX72994.1| protein of unknown function DUF214 [Methanocaldococcus vulcanius
M7]
Length = 395
Score = 64.4 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/252 (14%), Positives = 78/252 (30%), Gaps = 13/252 (5%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M I A++ + R S ++ IG++IGV+A++ ++S+ G + + +
Sbjct: 1 MKIDDIVAF--AFKNISKKRTQ------SMLTIIGIVIGVLAMVSLISLGYGVQNYIKEE 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
++ I + + + + V + G +
Sbjct: 53 MMKIGSNKITILPMKQFGVPPSHYFTKKDVKAIENVKGVDAVMYGWYGGCEIEYNGEKKF 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+S Q D R G +
Sbjct: 113 VSYYYAKPSQLKKVYKGSGYEIDEGRWLSDNDKYACVIGYGTAHDLFNR-----EIKIGD 167
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ I+ K + V+G+ + D+ V +++ + F E + I V VK+ + I +
Sbjct: 168 VIKIKDKKFRVVGILKPVGDQQDDNSVLLNIDIGEKLFGNEGKYNFITVTVKEGEDINEV 227
Query: 241 HENIVRILGNGV 252
I + L
Sbjct: 228 ANEIKKALKKSF 239
>gi|239617953|ref|YP_002941275.1| protein of unknown function DUF214 [Kosmotoga olearia TBF 19.5.1]
gi|239506784|gb|ACR80271.1| protein of unknown function DUF214 [Kosmotoga olearia TBF 19.5.1]
Length = 367
Score = 64.4 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/264 (15%), Positives = 81/264 (30%), Gaps = 40/264 (15%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
+ +A R S + F+ + F+ ++IG++ LIVV+SV+NGF +I+ +
Sbjct: 5 SVSLELA-RAFSSRNRKHFV-----LPFLAIVIGLIGLIVVLSVINGFDSLLIESLTSFF 58
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
H+++ Y + V + ++ +
Sbjct: 59 PHLLVDSPDYVPSGINELLTYFPLSIHEGVVSMGTNFSGSFVYTTNEDGLRYIDRFLQDG 118
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
L ++ I + I + G
Sbjct: 119 RMPL----------------------AESEIVLGKEIMEKLALTIGDIILLYSYKGREPV 156
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
SK YTV+G +D+ + + + V++ DP + I
Sbjct: 157 SKQYTVVGTLNTGIYQFDSSVCVI----------RGDLFDFTAVYLLDPMKAGEFKRRIE 206
Query: 246 RILGNGVVVIDWQQRYQIFFSCYE 269
+ VV WQ+ Q F+ +
Sbjct: 207 K--DTSFVVYSWQELNQSFYKAVK 228
>gi|320451306|ref|YP_004203402.1| lipoprotein releasing system transmembrane protein [Thermus
scotoductus SA-01]
gi|320151475|gb|ADW22853.1| lipoprotein releasing system transmembrane protein [Thermus
scotoductus SA-01]
Length = 373
Score = 64.0 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/262 (16%), Positives = 84/262 (32%), Gaps = 29/262 (11%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
RF + +A +L + ++ +GV +GV L+ +S+ NGF +++ L
Sbjct: 1 MRFALFLALAHLKRRPLQ------TGLALLGVGVGVAVLLTALSLTNGFVSGLVRATLKA 54
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H+V+ + + P+V PF + +A ++ + G G V +
Sbjct: 55 YPHLVL-----FSLSEELPPFPTREHPEVEAYAPFAATKALLTRPAEGARGPGVDFATLV 109
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ G G + + L + +
Sbjct: 110 GLGEGGEALYPDLGLRLEPGGIYLGSALQQSL-------------GAFVGDRLYALSATQ 156
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
VLG FR D+ ++ L+ + + G +V +KDP ++ +
Sbjct: 157 ERVELKVLGTFRTGNYLLDSAYAFVDLKTVERLSGI--RAQGYQVRLKDPWRAKEIGVAL 214
Query: 245 VRILGNGVVVIDWQQRYQIFFS 266
G WQ +
Sbjct: 215 A---GTRFFPQAWQDTQRTLLE 233
>gi|310779037|ref|YP_003967370.1| protein of unknown function DUF214 [Ilyobacter polytropus DSM 2926]
gi|309748360|gb|ADO83022.1| protein of unknown function DUF214 [Ilyobacter polytropus DSM 2926]
Length = 403
Score = 64.0 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/251 (15%), Positives = 85/251 (33%), Gaps = 6/251 (2%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A+R +F N++ +F+++ S MIG+M + V + + G + + G V
Sbjct: 4 LKIAFRNIFRNKRRSFLTVVST------MIGIMGVTVGLGWVYGIERMFTEEGKKLTGIV 57
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + L + + ++ K L G A +
Sbjct: 58 RVTAHDFQLKEKSLDISSNISSDEIRKYLRDFDGTAIGRIKFGAMIFSGDKDERAMGIGI 117
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ + + R ++ + + I +T S
Sbjct: 118 EKEDRNIIGFDNFIYEGRFLDFEKNNEIIIGSKVKEKLGLKIGDSVTVLTFTQDKSISAL 177
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ F N Y++L++AQ ++ N V+ ++ K+ E+ + +V L
Sbjct: 178 NYKISGFYKMDNGRLNRSFYVTLKDAQYLLDMNNMVTEFLLYPKEEKNSEEYKKILVSEL 237
Query: 249 GNGVVVIDWQQ 259
G +V W +
Sbjct: 238 GKNYLVKLWSE 248
>gi|124008067|ref|ZP_01692766.1| efflux ABC transporter, permease protein [Microscilla marina ATCC
23134]
gi|123986481|gb|EAY26287.1| efflux ABC transporter, permease protein [Microscilla marina ATCC
23134]
Length = 408
Score = 64.0 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/263 (14%), Positives = 94/263 (35%), Gaps = 14/263 (5%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMN----GFREDMIKRVLGI 64
+ +AW+ ++ N + + I S + +G+ G+ L + + N G E+ + V
Sbjct: 3 IKIAWKNIWRNPMRSGVVIVSVL--LGIWAGIFVLAFSLGMNNQRVKGQLENFVGHVTIK 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + +D + + + ++ S+GG G + GI
Sbjct: 61 HAKYDEDKLVKYAIDDADKIVQQVSKQPQVTATTTRTSAVGMATSSAGGYGAAIHGIDLQ 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + + S+ + + ++IGK LA+ L + + K+ + +
Sbjct: 121 NEPKVFSLKSKLVEGKYFEGIKRNPILIGKKLAKRLNLKLRSKMVLTFQNENGDITAGA- 179
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ ++G+++ YD V++ + Q + + I V + + +N+
Sbjct: 180 ----FRIVGLYKSSNTVYDESNVFVRQNDLQKLLGNDVLIHHIVCRVDNYQVAPEVVKNL 235
Query: 245 VRIL---GNGVVVIDWQQRYQIF 264
L + V W+
Sbjct: 236 QGKLAKNHQNITVQSWKDTSPDL 258
>gi|330507373|ref|YP_004383801.1| ABC transporter permease [Methanosaeta concilii GP-6]
gi|328928181|gb|AEB67983.1| ABC transporter, permease protein [Methanosaeta concilii GP-6]
Length = 385
Score = 64.0 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 54/255 (21%), Positives = 98/255 (38%), Gaps = 21/255 (8%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
FE+ VA R++ +NR+ ++ S V I V +I+ + + +I+ + N
Sbjct: 2 FELDVALRHIVTNRRGTAFTLIS------VAIAVAIIIMSLGLTESVSSQIIENTVNKNP 55
Query: 67 HVV--IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H++ ++ + Y+ +++++ P V+ V P + GQ + S V
Sbjct: 56 HILIGPKESESYINMYRSLSDQVGSYPGVLAVSPRLVGQGAARFQDNVQSVEFVGVDPAL 115
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + S GN S+ +G +G +LARNL I G + + +GI
Sbjct: 116 EDRLMSVQESTISGNFSDLRFNNRGAFLGVELARNLNIREGGDFYLYLKNDSLRLKMIGI 175
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
K D +VY+SL AQ + VS I V + D + +
Sbjct: 176 LQKDT-----------VKDETLVYLSLSTAQELVAEGDVVSEIGVKLADYTRAPAMAKKL 224
Query: 245 VRILGNGVVVIDWQQ 259
+ WQ
Sbjct: 225 NDA--SRYKATSWQD 237
>gi|327405665|ref|YP_004346503.1| hypothetical protein Fluta_3697 [Fluviicola taffensis DSM 16823]
gi|327321173|gb|AEA45665.1| protein of unknown function DUF214 [Fluviicola taffensis DSM 16823]
Length = 407
Score = 64.0 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/271 (15%), Positives = 95/271 (35%), Gaps = 25/271 (9%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
++ Y+FSN++ + ++ +GV++G+ I + S++ GF V H+ +
Sbjct: 7 ISKTYIFSNKR------LTAVAVLGVLLGMSVYIFMNSLLVGFDRSSNTSVFRNTAHIRV 60
Query: 71 Q------------QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
++ + + I + V+ + Q V+ S + +
Sbjct: 61 YKDDEISKSLPKSNNENYIIINPKVVPNNNTIINPKLVIETILKQKEVTVASPQVNTNVF 120
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLG----ISIGDKINILSPY 174
S S L N+ + L N S + ++
Sbjct: 121 YNNGKSQISGLAVGIKPDEANLMYNIKSFMVEGEFDLLKSNPNGIIVGSGIAEKMNVTVS 180
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKD 233
++ ++++ ++G+F+ D Y++L +Q N+ ++ I V V D
Sbjct: 181 NNINLTSSKGINRTFKIIGIFKTNNSVTDKTKSYINLSASQQLLKQGNSYITDINVNVTD 240
Query: 234 PDAIEKTHENIVRILGNGVVVIDWQQRYQIF 264
P+ E + +I G W+Q +
Sbjct: 241 PEKAENVAAKLSQI--TGYKAEGWKQTNETL 269
>gi|254501776|ref|ZP_05113927.1| efflux ABC transporter, permease protein [Labrenzia alexandrii
DFL-11]
gi|222437847|gb|EEE44526.1| efflux ABC transporter, permease protein [Labrenzia alexandrii
DFL-11]
Length = 412
Score = 64.0 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/277 (12%), Positives = 82/277 (29%), Gaps = 24/277 (8%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+ +A ++ + + + +S +GV +GV I + ++M G + D + ++
Sbjct: 3 LQFRIAATHVRNRLRQ------TVVSTLGVALGVGFSIAMAALMEGSQRDFMATLIDAIP 56
Query: 67 HVVIQQKYYPLVDYQ----------------FIANRLDFIPDVIKVLPFVSGQAFVSGLS 110
HV I+ + + + L L+
Sbjct: 57 HVEIKDDKRTPTAQPASTVYDAVAFRGLRPLEDLRGIRNPTEALASLRDWVDGDIAQRLT 116
Query: 111 SGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINI 170
++ N+ D +G +G + +
Sbjct: 117 GQAVLRYSGQDIGMTLIGVRPKQELLVSNIGEDIRKGDFEDLGTTSNGLVLGDKAAERLG 176
Query: 171 LSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVF 230
VT +K + ++G+F D + Y L+ Q+ + ++ I +
Sbjct: 177 ADLGDTVTLTSANGVAKRFKIVGLFHTGITTSDESLAYAPLKAVQILLEKPDIINAITIR 236
Query: 231 VKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSC 267
+++ D R LG I W++ +
Sbjct: 237 LRNIDVAVAIAARAERQLG--YKAISWEEANEGLMEA 271
>gi|196233007|ref|ZP_03131856.1| protein of unknown function DUF214 [Chthoniobacter flavus Ellin428]
gi|196222985|gb|EDY17506.1| protein of unknown function DUF214 [Chthoniobacter flavus Ellin428]
Length = 405
Score = 63.6 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/261 (13%), Positives = 84/261 (32%), Gaps = 14/261 (5%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + + F +A R L N+ S ++ +G++IGV A+I ++ V NG + ++ +
Sbjct: 1 MKLTATF--RIALRALKRNKMR------SILTMLGIIIGVAAVIAMVGVGNGAKAEVEAQ 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + ++++ + + V+ +S
Sbjct: 53 IATLGKNMILVFSGSMTSSGVRGGYGAAGTMKIEDAEAILRETPGVTLVSPEIRTSAQVA 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
N ++ S Y + +D+ + + K +G+ P+
Sbjct: 113 AGNQNWYTSVLGESEDYFEMREWEFTEGSSFTDQDVRSANKVGVIGKTTAQMIFGEEDPV 172
Query: 181 GMGIRSKSYTVLG------MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G IR ++ + + + + A + GI V +
Sbjct: 173 GQIIRVRNVPFRITGLLKSKGFSLGGNDQDDVFVVPYTTAMKRLTGATVLRGINVQAAND 232
Query: 235 DAIEKTHENIVRILGNGVVVI 255
D + + + I +L +
Sbjct: 233 DVMTRVQDQISSLLRQRHNIR 253
>gi|284037748|ref|YP_003387678.1| hypothetical protein Slin_2865 [Spirosoma linguale DSM 74]
gi|283817041|gb|ADB38879.1| protein of unknown function DUF214 [Spirosoma linguale DSM 74]
Length = 408
Score = 63.6 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/268 (12%), Positives = 94/268 (35%), Gaps = 6/268 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
V +A + + + +F + + + + +G+ LIV +V+ G++ + +++
Sbjct: 1 MNVPVFLARK-VRHAPEGSFSATVTRVGIASIALGLAILIVAFAVLFGYKRTIEQKIFLF 59
Query: 65 NGHVVIQQKYYPLVDYQ---FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
H+ + + + + L I + + A +G+ + +
Sbjct: 60 GAHLQVSKFTNNASYEETALSLKTTLYQDSTKIPGVRHIQAVALKAGILKTPEELTGVIL 119
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
Y N F + L + ++ K+ + + +G
Sbjct: 120 KGVGKDYDWNLFKESLVAGTVPVVGADTGSGSTQLLLSQLMANQLKVKVGDAVP-LYFLG 178
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKT 240
R++ TV+G++ + D + ++ Q ++V E++V D + + T
Sbjct: 179 NPPRARKMTVVGIYETGLEEVDKTIALGDIRLVQKLNRWGPDSVGSYEIYVNDFNQLNLT 238
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCY 268
N+ + + + + +Y+ F
Sbjct: 239 ANNVFQAMAPDMRLTRVTDQYRPLFDWM 266
>gi|16264103|ref|NP_436895.1| hypothetical protein SM_b20369 [Sinorhizobium meliloti 1021]
gi|15140228|emb|CAC48755.1| putative ABC transporter [Sinorhizobium meliloti 1021]
Length = 413
Score = 63.6 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/280 (14%), Positives = 87/280 (31%), Gaps = 24/280 (8%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
R +A ++ + +++ +G I + AL M G ++D +++++
Sbjct: 1 MRLIFDIALTHVAGRGRQTLVAVIGVAVGVGFSIAMAAL------MQGGQDDFVRQLVDT 54
Query: 65 NGH-VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
H V ++ I + S + R +
Sbjct: 55 MPHVDVTDEQRSARRQPAEDLFEAVAISGLRPRDDRRGIINPTKAASWLEEWMPGRLAAV 114
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + R G V + K V + + S + M
Sbjct: 115 LNVQGVIRYSGREVGAVVIGIEPEKEVKVSHIVEDFESGSFAALAAGGNNVVIGDTMASR 174
Query: 184 IRS---------------KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIE 228
+ + +++ ++G+F D G Y+ L+ AQ+ N NA++ I
Sbjct: 175 LGAGLGDTITAVSSEGLARNFKIVGLFHTGTTARDEGEAYVLLKNAQILSNRPNAINEIR 234
Query: 229 VFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + DP+A + LG V WQ+ +
Sbjct: 235 IKLDDPNAAPTIARRVEAELGYKTVA--WQEANESILEAL 272
>gi|237738300|ref|ZP_04568781.1| lipoprotein releasing system transmembrane protein lolE
[Fusobacterium mortiferum ATCC 9817]
gi|229420180|gb|EEO35227.1| lipoprotein releasing system transmembrane protein lolE
[Fusobacterium mortiferum ATCC 9817]
Length = 388
Score = 63.6 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 52/262 (19%), Positives = 100/262 (38%), Gaps = 16/262 (6%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
E +A +++ +K S IS +G+ IGV+ L+V + + NG ++MI +L +
Sbjct: 3 IEFFIAKKHIIERKKQ------SLISVVGITIGVVVLMVSIGIANGLDKNMINSILSVTS 56
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
H ++ + +Y+ I ++ I V +P +S Q G V I D
Sbjct: 57 H-IMVSNGEKISNYKDIKRDIEKIEGVKGAVPSISTQGIFKYNGVYGGYVSGVKIEGYDL 115
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ + D G I + L V+ + +
Sbjct: 116 ESAKKAMDL-------DKKIVSGNISPDKINGILIGKELFNSIGAKIGDKVSIISSENKE 168
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ + G+F+ + DYD MV + L+ Q E+ S I+V + +P + + I+
Sbjct: 169 IKFEIEGVFQSGYYDYDINMVILPLKAVQYLTYGEDISSKIDVTLFNPYRAPEISDKIMA 228
Query: 247 ILGNGVVVIDWQQRYQIFFSCY 268
+ G+ W + + S
Sbjct: 229 V--TGIYSRTWGEMNRNLLSAL 248
>gi|78188349|ref|YP_378687.1| putative ABC transporter, integral membrane protein [Chlorobium
chlorochromatii CaD3]
gi|78170548|gb|ABB27644.1| putative ABC transporter, integral membrane protein [Chlorobium
chlorochromatii CaD3]
Length = 422
Score = 63.6 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 44/292 (15%), Positives = 91/292 (31%), Gaps = 42/292 (14%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +A R+L R+ + + GV I M LI S+ G + ++ ++
Sbjct: 1 MIKTL-LSIAMRHLVGRRRQ------TLTTIAGVAISTMVLITTNSLTRGLLDSFVETIV 53
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ H++++ + + + + + + Q ++ +
Sbjct: 54 NVAPHIIVKGEKINPMPINLFS----GKQNNAIAIVEDNIQKQEREEVQNYRQIIALLDT 109
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGD---------------- 166
+ S + V +I K + N I
Sbjct: 110 PAYASRVTAISPYVQSQVMAVKGSRNEALIIKGVDINQEDKITGIRKKLVAGDVAQFEKN 169
Query: 167 -----------KINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQ 215
+ + V + +S V G+F D V +SL+ Q
Sbjct: 170 ATALLVGRTVARDMNIELNDQVVIIPASGKSWQCKVAGIFFSGVNAVD-NSVLVSLKFGQ 228
Query: 216 LYFNLE-NAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFS 266
+ L N VSGI + VKDP + + ++ +G + WQ+ S
Sbjct: 229 IIEGLPDNKVSGIALTVKDPFNNKPLATELEQL--SGYRCLTWQEENANILS 278
>gi|315187119|gb|EFU20876.1| protein of unknown function DUF214 [Spirochaeta thermophila DSM
6578]
Length = 424
Score = 63.6 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 49/258 (18%), Positives = 91/258 (35%), Gaps = 7/258 (2%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +AW+ LF ++ S + V +G++ +VV+ V +G E + +R L +
Sbjct: 5 IYLAWKNLFDGPS---LAPRIRSSLLAVALGLVPFVVVLHVSDGMIEAITRRFLETTTYH 61
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
Y P + + RL + G G + V
Sbjct: 62 FQAFAYAPDLSMEEGVERLAAEGFLAVPEIQGMGLLVNGVRREGVTIRAVPSWWWEKDEG 121
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
L++S S G R V + + + K+ +L +G T + +
Sbjct: 122 LRSSLSIEKGRFDLSSPRHMVVGVEVARTLGISVGDKVKLLVLRSFGGGTILPRIATFEV 181
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD-AIEKTHENIVRI 247
V + D D VY+ + F+ ++ + + + V DP +E I
Sbjct: 182 TGVT---STGYQDVDKLWVYVPFEWGDRVFDRRSSRAFLGIKVDDPFHDMEALRSRIAAC 238
Query: 248 LGNGVVVIDWQQRYQIFF 265
LG G VV+ W+ + F
Sbjct: 239 LGAGWVVLSWKDLGRAQF 256
>gi|254671963|emb|CBA04379.1| lipoprotein releasing system transmembrane protein [Neisseria
meningitidis alpha275]
Length = 293
Score = 63.2 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/175 (22%), Positives = 81/175 (46%), Gaps = 1/175 (0%)
Query: 96 VLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKD 155
P+VS QA ++ + + + + ++ G + +I+G
Sbjct: 3 AAPYVSNQALLANAGEIRGVQMRGILPSEERKVVEYGDKMPAGKFEDLIPGEFDIILGVG 62
Query: 156 LARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQ 215
LA LG +G+K+ +++P G+VTP G+ R K +TV+G+ + + DN + +Q+A+
Sbjct: 63 LAEALGAEVGNKVTVITPEGNVTPAGVVPRLKQFTVVGLVKTGVYEVDNSLAMTHIQDAR 122
Query: 216 LYFNLENAVSGIEVFVKDPDAIEKTHENIV-RILGNGVVVIDWQQRYQIFFSCYE 269
+ + L+ V+G+ + + DP ++ + V V DW + +F E
Sbjct: 123 VLYRLDKEVAGLRLKLADPQNAPALTATLIPEAQRDTVWVRDWTFSNRSYFEAVE 177
>gi|268318079|ref|YP_003291798.1| hypothetical protein Rmar_2534 [Rhodothermus marinus DSM 4252]
gi|262335613|gb|ACY49410.1| protein of unknown function DUF214 [Rhodothermus marinus DSM 4252]
Length = 406
Score = 63.2 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 44/267 (16%), Positives = 92/267 (34%), Gaps = 19/267 (7%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+AWR L NR+ + ++ V ++ + + G + I++ ++ +
Sbjct: 5 LAWRNLGRNRRR------TLLTVAAVFFATFLMVFMRGLQLGTYDFFIRQSTRLSTGYLQ 58
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKV--------LPFVSGQAFVSGLSSGGSGVLVRGIS 122
Q L + ++ + + GV + GI
Sbjct: 59 VQHPDYLDRRSLRQSFRLTDSLFARIRTTPGVTGAAPRLESGGLISNRATSYGVRLLGID 118
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + +R R ++ G L NLG S+GD + +L G
Sbjct: 119 PAYEPDVTDFPTRLVEGRMPATTRPLEIVAGYRLLENLGASVGDTLVLL-----AETYGG 173
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ S+ V+G R+ + +D +V + L Q N V+ + V V+ + +
Sbjct: 174 FLTSRFAVVVGALRIGYEVHDRSLVLLPLAALQDLLETGNRVTAVAVAVRRNADVPVVRD 233
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ L + +VV W++ E
Sbjct: 234 RLEARLDSTLVVRTWEELMPELRQAIE 260
>gi|188995251|ref|YP_001929503.1| putative ABC transporter permease protein [Porphyromonas gingivalis
ATCC 33277]
gi|188594931|dbj|BAG33906.1| putative ABC transporter permease protein [Porphyromonas gingivalis
ATCC 33277]
Length = 411
Score = 63.2 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/272 (13%), Positives = 80/272 (29%), Gaps = 11/272 (4%)
Query: 5 SRFEVIVAWRYLFSNRKNA-FISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ + +A R K I+ +S IG+M+ +M +++ +S+ GF++++ V G
Sbjct: 1 MKIDFFLAGRLFRGGGKEGKGIAPIVRLSVIGIMLSLMVMLITVSIAGGFKQNIRSLVYG 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
GH+ I + L+ I V V V + + + + +
Sbjct: 61 YTGHLCIAPVAGTSDHFNAPVGMLEAITSVEGVDRVVPTIEMTGVAKTDSAFAGILLMGD 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ F + F V L + + KI + G
Sbjct: 121 NSLRTRNPLFGQTVSGNYPSFSSADTVPNPILLPQVTADKLHLKI---GDKLRIYFAGTE 177
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ + + ++ + VS + ++ DPD +
Sbjct: 178 RMRLRAFTVAGVYSGGKMDMPVGLVSADVLRRVGGLGTDDVSRLLIYASDPDETDLVVTR 237
Query: 244 IVRILGNGVVV-------IDWQQRYQIFFSCY 268
+ L + V + +
Sbjct: 238 VFDRLSETLYVGEQRLTINTATELNPMIMDWL 269
>gi|256820951|ref|YP_003142230.1| hypothetical protein Coch_2125 [Capnocytophaga ochracea DSM 7271]
gi|256582534|gb|ACU93669.1| protein of unknown function DUF214 [Capnocytophaga ochracea DSM
7271]
Length = 412
Score = 63.2 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/274 (14%), Positives = 108/274 (39%), Gaps = 13/274 (4%)
Query: 5 SRFEVIVAWRYLFSNR-KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
E +A R +FS K S ++ + +G++ +++ ++ G + + ++++
Sbjct: 1 MNVEYFIAKRVIFSKGDKGTISSPIIKMAIAAIAVGMVMMLIAIATGIGLQRKIREKLVV 60
Query: 64 INGHVVIQQKYYPLVD--------YQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSG 115
+GH+ I + + Q +P+V + + + ++ S
Sbjct: 61 FHGHIQIFDYSNNISEVSTKPIKLQQDFYPTFSAVPEVTHIQAVATKGGIIRTETTYESI 120
Query: 116 VLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYG 175
+ + ++S +++ + + V++ LA L + +GD+ +
Sbjct: 121 LAKGVGKDYNWSLIRDFITEGRTPNVASEEVTDEVLMSTYLANRLHLKLGDRCQAIFLKD 180
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLENAVSGIEVFVKDP 234
+ +S+ ++G++ F ++D V+ ++ Q + + E+F+KD
Sbjct: 181 EA---AQAPNQRSFKIVGLYNSGFQEFDASYVFTDIRHIQKINKWQPDQIGNFELFIKDF 237
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
D IE+ + + +G+ + Q++ F
Sbjct: 238 DRIEEVGKQVYGKVGSFLDSQTIIQKFPFIFEWL 271
>gi|237653488|ref|YP_002889802.1| hypothetical protein Tmz1t_2826 [Thauera sp. MZ1T]
gi|237624735|gb|ACR01425.1| protein of unknown function DUF214 [Thauera sp. MZ1T]
Length = 406
Score = 63.2 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 51/279 (18%), Positives = 96/279 (34%), Gaps = 19/279 (6%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + FE I A R+L R + + I + V++ + AL+ +G + ++++R
Sbjct: 1 MKSWMPFEWIAALRFLQEGRMQSLLIIVGVGVGVAVIVFMSALL------SGLQANLVRR 54
Query: 61 VLGINGHVV----------IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLS 110
L H+V + + Q A RL I + + ++ +S
Sbjct: 55 TLSSQAHIVLLPAEEVARPQASSGHDAIRLQKQAQRLRSIDQWQLLRDRLEAWPEIAAVS 114
Query: 111 SGGSGVLVRGI-SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN 169
SG S L Y V + R + + K
Sbjct: 115 PAASGPAFAVRGDASKAVTLLGIEPARYQQVIDLGGRITAGELRVGAGEAVIGIELAKDL 174
Query: 170 ILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV 229
+ G +++ TV G+F + + VY+ L+ Q +L VS I++
Sbjct: 175 GADVGDKLRIRGAQGEAETLTVTGLFDLGNKGVNARNVYVGLRTGQTLLDLVGGVSNIDL 234
Query: 230 FVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ D D E + I +G++ W + F +
Sbjct: 235 ALHDLDLAEDVAQRIAAE--SGLIADSWIRTNAQFVTAL 271
>gi|34540957|ref|NP_905436.1| hypothetical protein PG1252 [Porphyromonas gingivalis W83]
gi|34397272|gb|AAQ66335.1| membrane protein, putative [Porphyromonas gingivalis W83]
Length = 411
Score = 63.2 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/272 (13%), Positives = 80/272 (29%), Gaps = 11/272 (4%)
Query: 5 SRFEVIVAWRYLFSNRKNA-FISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ + +A R K I+ +S IG+M+ +M +++ +S+ GF++++ V G
Sbjct: 1 MKIDFFLAGRLFRGGGKEGKGIAPIVRLSVIGIMLSLMVMLITVSIAGGFKQNIRSLVYG 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
GH+ I + L+ I V V V + + + + +
Sbjct: 61 YTGHLCIAPVAGTSDHFNAPVGMLEAITSVEGVDRVVPTIEMTGVAKTDSAFAGILLMGD 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ F + F V L + + KI + G
Sbjct: 121 NSLRTRNPLFGQTVSGNYPSFSSADTVPNPILLPQVTADKLHLKI---GDKLRIYFAGTE 177
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ + + ++ + VS + ++ DPD +
Sbjct: 178 RMRLRAFTVAGVYSGGKMDMPVGLVSADVLRRVGGLGADDVSRLLIYASDPDETDLIVTR 237
Query: 244 IVRILGNGVVV-------IDWQQRYQIFFSCY 268
+ L + V + +
Sbjct: 238 VFDRLSETLYVGEQRLTINTATELNPMIMDWL 269
>gi|119356225|ref|YP_910869.1| hypothetical protein Cpha266_0386 [Chlorobium phaeobacteroides DSM
266]
gi|119353574|gb|ABL64445.1| protein of unknown function DUF214 [Chlorobium phaeobacteroides DSM
266]
Length = 422
Score = 63.2 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/287 (13%), Positives = 85/287 (29%), Gaps = 32/287 (11%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +A R+L R+ + + GV + M LI +S+ G + I ++
Sbjct: 1 MLKTL-FDIALRHLLGRRRQ------TLTTIFGVAVSTMVLITTISLTRGLLDSFIDTIV 53
Query: 63 GINGH--------------------VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSG 102
+ H + Q ++ + +
Sbjct: 54 NVAPHITIKGEKLNPVPVNIINRAGETRVSMVEDNIRKQEKEEVRNYRQILGMFSSSLYE 113
Query: 103 QAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGI 162
+ + S V+ + + L+ +S + + + + +
Sbjct: 114 KEVTASSPYVESQVMAVKGNRNQPILLKGVIIDRENEISGIAGKIQQGDLSVFRNSSNAL 173
Query: 163 SIGDKI--NILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL 220
+G + ++ D + + + + V++SL+ Q+ L
Sbjct: 174 LVGRTVARDMHLELNDEVVIIPASGKSRQCKVAGIFFSGVNAVDNSVFVSLKLGQIIEGL 233
Query: 221 E-NAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFS 266
N VSGI + V+DP + RI G WQ+ S
Sbjct: 234 PANKVSGIALKVRDPLNNTPLAREMERI--TGYKCPTWQEENASILS 278
>gi|307300044|ref|ZP_07579829.1| protein of unknown function DUF214 [Sinorhizobium meliloti BL225C]
gi|306904933|gb|EFN35516.1| protein of unknown function DUF214 [Sinorhizobium meliloti BL225C]
Length = 413
Score = 63.2 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 41/280 (14%), Positives = 87/280 (31%), Gaps = 24/280 (8%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
R +A ++ + +++ +G I + AL M G ++D +++++
Sbjct: 1 MRLIFDIALTHVAGRGRQTLVAVIGVAVGVGFSIAMAAL------MQGGQDDFVRQLVDT 54
Query: 65 NGH-VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
H V ++ I + S + R +
Sbjct: 55 MPHVDVTDEQRSARRQPAEDLFEAVAISGLRPRDDRRGIINPTKAASWLEEWMPGRLAAV 114
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + R G V + K V + + S + M
Sbjct: 115 LNVQGVIRYSGREVGAVVIGIEPEKEVKVSPIVEDFESGSFAALAAGGNNVVIGDTMASR 174
Query: 184 IRS---------------KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIE 228
+ + +++ ++G+F D G Y+ L+ AQ+ N NA++ I
Sbjct: 175 LGAGLGDTITAVSSEGLARNFKIVGLFHTGTTARDEGEAYVLLKNAQILSNRPNAINEIR 234
Query: 229 VFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + DP+A + LG V WQ+ +
Sbjct: 235 IKLDDPNAAPTIARRVEAELGYKTVA--WQEANESILEAL 272
>gi|110597590|ref|ZP_01385875.1| Protein of unknown function DUF214 [Chlorobium ferrooxidans DSM
13031]
gi|110340710|gb|EAT59187.1| Protein of unknown function DUF214 [Chlorobium ferrooxidans DSM
13031]
Length = 422
Score = 63.2 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 47/299 (15%), Positives = 93/299 (31%), Gaps = 53/299 (17%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F +A R+L R+ + + GV + M LI S+ G + I+ ++
Sbjct: 1 MFKTL-FDIAVRHLLGRRRQ------TLTTIFGVAVSTMVLITTNSLTRGLLDSFIETIV 53
Query: 63 GINGHVVIQQKYYPLVDYQFIA-------------------------------NRLDFIP 91
+ H+ ++ + V +A L
Sbjct: 54 NVAPHITVKGEKMNPVPVNILAGQKESSVAIVEDNIQKLERDEVRNYGQILGVFSLPQYN 113
Query: 92 DVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVI 151
I ++ S +L++G+ + + +++ +
Sbjct: 114 KRIVAASPYVLSQVMAVKGSRNQPLLLKGVMIDREDAISGIRKKLTSGDITLYEKTPNAL 173
Query: 152 IGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSL 211
+ + L DV + +S+ V G+F D V +SL
Sbjct: 174 L--------VGRTVARDMNLQLGDDVVIIPSSGKSRQCKVAGIFFSGVNAVD-NGVLVSL 224
Query: 212 QEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQ---IFFS 266
+ Q+ L N VSGI + V DP + + +I G + WQ+ + F
Sbjct: 225 KLGQIIEGLPANKVSGIALKVADPFNNAGLSKELEKI--TGYRCLTWQEENESVLSLFK 281
>gi|294495501|ref|YP_003541994.1| hypothetical protein Mmah_0826 [Methanohalophilus mahii DSM 5219]
gi|292666500|gb|ADE36349.1| protein of unknown function DUF214 [Methanohalophilus mahii DSM
5219]
Length = 404
Score = 62.9 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/254 (12%), Positives = 83/254 (32%), Gaps = 8/254 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + S + S ++ +G++IGV A+I +S+ F + + + +
Sbjct: 7 AFKIALGSIRSAKLR------SLLTTLGIVIGVAAVIANVSLGASFNQFFTDEIGAVGSN 60
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+I + P + + + + + +V + P S A VS SS ++ +
Sbjct: 61 FIIVESKEPGILGKEEKSLISNLQEVDGISPINSQTATVSYQSSRRHVGIMGVTEDYPEV 120
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ + + G + +++ + + + +
Sbjct: 121 ANLQLAEGNFLIDKDSYAAVIGSEVAEEIFDRPVGNKNSIDVTFTKSNGESVSHRFVVKG 180
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
++ + +++ + EN + K + +E+T E I
Sbjct: 181 ILQSPDTQLVQSGIEPDNRIFIPIATMNSMLG-ENHYDSFFIKAKSMEVVEQTSEEIDGK 239
Query: 248 LGNGVVVIDWQQRY 261
LG + ++
Sbjct: 240 LGRQFGIDS-REMN 252
>gi|184156865|ref|YP_001845204.1| peptide ABC transporter permease [Acinetobacter baumannii ACICU]
gi|294840228|ref|ZP_06784911.1| peptide ABC transporter permease [Acinetobacter sp. 6014059]
gi|183208459|gb|ACC55857.1| ABC-type antimicrobial peptide transport system, permease component
[Acinetobacter baumannii ACICU]
gi|322506759|gb|ADX02213.1| macB [Acinetobacter baumannii 1656-2]
gi|323516630|gb|ADX91011.1| peptide ABC transporter permease [Acinetobacter baumannii
TCDC-AB0715]
Length = 664
Score = 62.9 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/259 (13%), Positives = 82/259 (31%), Gaps = 11/259 (4%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + ++R F ++ +G++IG+ +++ V+++ NG ++ ++ + + +
Sbjct: 271 AFQMALLSMNAHRMRTF------LTMLGIIIGIASVVTVVALGNGSQQQILSNISSLGTN 324
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + D AN +P L + VS + S + + +
Sbjct: 325 TITVFQGRGFGDNSKTANFKTLVPADADALMTQPYVSAVSPMVSTSKTMRYQQNEANATI 384
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVII----GKDLARNLGISIGDKINILSPYGDVTPMGMG 183
++ + + +D+ + + +P G V +G
Sbjct: 385 NGVSNDYFDVKGLVFKDGQTFDQRSVRDRSQDVVIDTNTQKQFFSDGTNPIGQVVLLGSV 444
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ ++ D VYM + V I V + D +
Sbjct: 445 PA-RIIGIVEPQTSGMGSDDTLNVYMPYTTVMSRMLGQAHVRNIIVRINDKYSTSAAENA 503
Query: 244 IVRILGNGVVVIDWQQRYQ 262
IV +L D
Sbjct: 504 IVNLLTQRHGAQDIFTMNS 522
>gi|326335273|ref|ZP_08201468.1| ABC superfamily ATP binding cassette transporter, permease
[Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325692544|gb|EGD34488.1| ABC superfamily ATP binding cassette transporter, permease
[Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 416
Score = 62.9 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 44/280 (15%), Positives = 104/280 (37%), Gaps = 17/280 (6%)
Query: 5 SRFEVIVAWRYLF-SNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
E +A R + S K+ S I+ + +GV+ +++ ++ G +E + +++
Sbjct: 1 MNLEFFIANRLVRDSGNKSNISSPIIKIAISAIALGVVMILIAIATGRGLQERIRQKIAS 60
Query: 64 INGHVVIQQKYYPL------------VDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSS 111
+NGH+ I Y+ V+ + ++ + +
Sbjct: 61 LNGHIQIFNYDTNRSEVSIIPISTEEDFYRDPHFFNQEEKKVLHIQSVITKGGIIRTEKT 120
Query: 112 GGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL 171
+ + D+ Y++ + + V+I + LA L +S+GD N
Sbjct: 121 FEGIIAKGVGKDFDWQYMKEYLKKGKLPNFSLDTISNEVLISEYLANRLELSVGDICNTF 180
Query: 172 SPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGI-EVF 230
D +++ ++G++ F +D + + +++ Q + +G+ EVF
Sbjct: 181 FLREDNI---SIPNQRNFRIVGIYSSGFQQFDETYILVDIRQLQKINKWTSNQTGLFEVF 237
Query: 231 VKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+KD D + E + + Q+Y F + +
Sbjct: 238 IKDFDQMSSVGEYVYNHIPAEYDSQTIAQKYPTIFDWFHT 277
>gi|307718923|ref|YP_003874455.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Spirochaeta thermophila DSM 6192]
gi|306532648|gb|ADN02182.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Spirochaeta thermophila DSM 6192]
Length = 424
Score = 62.9 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 49/258 (18%), Positives = 92/258 (35%), Gaps = 7/258 (2%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +AW+ LF ++ S + V +G++ +VV+ V +G E + +R L +
Sbjct: 5 IYLAWKNLFDGPS---LAPRIRSSLLAVALGLVPFVVVLHVSDGMIEAITRRFLETTTYH 61
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
Y P + + RL + G G + V
Sbjct: 62 FQAFAYAPDLSMEEGVERLAAEGFLAVPEIQGMGLLVNGVRREGVTIRAVPSWWWEKDEG 121
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
L++S S G R V + + + K+ +L +G T + +
Sbjct: 122 LRSSLSIEKGRFDLSSPRHMVVGVEVARTLGISVGDKVKLLVLRSFGGGTILPRIATFEV 181
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD-AIEKTHENIVRI 247
V + D D VY+ + F+ ++ + + + V+DP +E I
Sbjct: 182 TGVT---STGYQDVDKLWVYVPFEWGDRVFDRRSSRAFLGIKVEDPFHDMEALRSRIAAC 238
Query: 248 LGNGVVVIDWQQRYQIFF 265
LG G VV+ W+ + F
Sbjct: 239 LGAGWVVLSWKDLGRAQF 256
>gi|291333969|gb|ADD93646.1| lipoprotein releasing system transmembrane protein LolC/E family
[uncultured marine bacterium MedDCM-OCT-S04-C694]
Length = 311
Score = 62.5 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 58/126 (46%)
Query: 144 FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYD 203
D G+ IG +AR LG+ +GDKI ++SP G T G R K + ++ +F D D
Sbjct: 38 NDFENGISIGSGVARELGVQVGDKIKLISPNGVRTAFGTSPRVKQFEIVYIFTAGRYDID 97
Query: 204 NGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQI 263
Y+ AQ YFN E IEV + +P + + +I I+ + + W+
Sbjct: 98 RTRSYLPFSIAQEYFNREGLADEIEVLLDNPSNLTEAISHIENIVDPNIQLWTWRDASSS 157
Query: 264 FFSCYE 269
F E
Sbjct: 158 FLRALE 163
>gi|127513587|ref|YP_001094784.1| hypothetical protein Shew_2659 [Shewanella loihica PV-4]
gi|126638882|gb|ABO24525.1| protein of unknown function DUF214 [Shewanella loihica PV-4]
Length = 421
Score = 62.5 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 37/263 (14%), Positives = 89/263 (33%), Gaps = 15/263 (5%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
++AWR L+ NR + I ++ G++ ++V++ M G +MI + +
Sbjct: 15 LLAWRNLWRNRLR------TSIMVCAMVFGLVGVVVMLGFMTGMYANMIDNAVAWQTSHL 68
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
L+D + P + ++ Q + G R + +
Sbjct: 69 QVHNKDYLLDPDINSRIRAPEPVLAELSQIPEVQGVSARFVVQGMLASPRASRGIRINGV 128
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS- 188
+ ++++ +G + G + ++ + V ++ S
Sbjct: 129 DPAAEARVTPIADNITQGDWLEAGGRHPIVISEKTASRLKLRLGSKVVLTFSNADKAVSG 188
Query: 189 --YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK-----DPDAIEKTH 241
+ V G++R +D Y+ + L + V I + + D +
Sbjct: 189 AAFRVAGLYRSPSSTFDEANAYVRRADLTALAGL-DGVHEIAIRLTKSDSLDNSRAKALA 247
Query: 242 ENIVRILGNGVVVIDWQQRYQIF 264
+ ++ +L V DWQ+ +
Sbjct: 248 KILLSVLSPQDRVRDWQEIQPML 270
>gi|169797229|ref|YP_001715022.1| macrolide ABC transporter ATP-binding/membrane protein
[Acinetobacter baumannii AYE]
gi|213155977|ref|YP_002318022.1| macrolide export ATP-binding/permease protein MacB [Acinetobacter
baumannii AB0057]
gi|215484670|ref|YP_002326905.1| Macrolide export ATP-binding/permease protein macB [Acinetobacter
baumannii AB307-0294]
gi|239500751|ref|ZP_04660061.1| Macrolide export ATP-binding/permease protein macB [Acinetobacter
baumannii AB900]
gi|260556111|ref|ZP_05828330.1| macrolide transporter [Acinetobacter baumannii ATCC 19606]
gi|294836316|ref|ZP_06780999.1| Macrolide export ATP-binding/permease protein macB [Acinetobacter
sp. 6013113]
gi|294857744|ref|ZP_06795513.1| Macrolide export ATP-binding/permease protein macB [Acinetobacter
sp. 6013150]
gi|301346496|ref|ZP_07227237.1| Macrolide export ATP-binding/permease protein macB [Acinetobacter
baumannii AB056]
gi|301509986|ref|ZP_07235223.1| Macrolide export ATP-binding/permease protein macB [Acinetobacter
baumannii AB058]
gi|301594199|ref|ZP_07239207.1| Macrolide export ATP-binding/permease protein macB [Acinetobacter
baumannii AB059]
gi|169150156|emb|CAM88050.1| macrolide transport protein (ABC superfamily, atp_bind
(N-terminal), membrane (C-terminal)) [Acinetobacter
baumannii AYE]
gi|193076338|gb|ABO10989.2| macrolide transport protein [Acinetobacter baumannii ATCC 17978]
gi|213055137|gb|ACJ40039.1| macrolide export ATP-binding/permease protein MacB [Acinetobacter
baumannii AB0057]
gi|213988091|gb|ACJ58390.1| Macrolide export ATP-binding/permease protein macB [Acinetobacter
baumannii AB307-0294]
gi|260410166|gb|EEX03465.1| macrolide transporter [Acinetobacter baumannii ATCC 19606]
Length = 664
Score = 62.5 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/259 (13%), Positives = 82/259 (31%), Gaps = 11/259 (4%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + ++R F ++ +G++IG+ +++ V+++ NG ++ ++ + + +
Sbjct: 271 AFQMALLSMNAHRMRTF------LTMLGIIIGIASVVTVVALGNGSQQQILSNISSLGTN 324
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + D AN +P L + VS + S + + +
Sbjct: 325 TITVFQGRGFGDNSKTANFKTLVPADADALMTQPYVSAVSPMVSTSKTMRYQQNEANATI 384
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVII----GKDLARNLGISIGDKINILSPYGDVTPMGMG 183
++ + + +D+ + + +P G V +G
Sbjct: 385 NGVSNDYFDVKGLVFKDGQTFDQRSVRDRSQDVVIDTNTQKQFFSDGTNPIGQVVLLGSV 444
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ ++ D VYM + V I V + D +
Sbjct: 445 PA-RIIGIVEPQTSGMGSDDTLNVYMPYTTVMSRMLGQAHVRNIVVRINDKYSTSAAENA 503
Query: 244 IVRILGNGVVVIDWQQRYQ 262
IV +L D
Sbjct: 504 IVNLLTQRHGAQDIFTMNS 522
>gi|126640607|ref|YP_001083591.1| macrolide transport protein [Acinetobacter baumannii ATCC 17978]
Length = 612
Score = 62.5 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/259 (13%), Positives = 82/259 (31%), Gaps = 11/259 (4%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + ++R F ++ +G++IG+ +++ V+++ NG ++ ++ + + +
Sbjct: 219 AFQMALLSMNAHRMRTF------LTMLGIIIGIASVVTVVALGNGSQQQILSNISSLGTN 272
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + D AN +P L + VS + S + + +
Sbjct: 273 TITVFQGRGFGDNSKTANFKTLVPADADALMTQPYVSAVSPMVSTSKTMRYQQNEANATI 332
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVII----GKDLARNLGISIGDKINILSPYGDVTPMGMG 183
++ + + +D+ + + +P G V +G
Sbjct: 333 NGVSNDYFDVKGLVFKDGQTFDQRSVRDRSQDVVIDTNTQKQFFSDGTNPIGQVVLLGSV 392
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ ++ D VYM + V I V + D +
Sbjct: 393 PA-RIIGIVEPQTSGMGSDDTLNVYMPYTTVMSRMLGQAHVRNIVVRINDKYSTSAAENA 451
Query: 244 IVRILGNGVVVIDWQQRYQ 262
IV +L D
Sbjct: 452 IVNLLTQRHGAQDIFTMNS 470
>gi|226940971|ref|YP_002796045.1| ABC transporter, inner membrane subunit [Laribacter hongkongensis
HLHK9]
gi|226715898|gb|ACO75036.1| ABC transporter, inner membrane subunit [Laribacter hongkongensis
HLHK9]
Length = 404
Score = 62.5 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 44/281 (15%), Positives = 87/281 (30%), Gaps = 23/281 (8%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+F VAWR + R S + GV IGV ++ + +V+NG + ++I++ L
Sbjct: 1 MKFVWTVAWRLMREGR------FQSLLILAGVTIGVAVVVYITAVVNGLQANIIEKTLST 54
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS-- 122
H+V++ + + R + + + +R +
Sbjct: 55 QAHIVLKPREDRNRRLIDLPARELMTEIETRTQRENTIDDWERRRQVATGIAGIRTSAAI 114
Query: 123 -----------NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL 171
L Y + + + + L + + +
Sbjct: 115 ASGPGFATKGGVRKSVSLIGVELEDYQRIVPLEAKLQAGKVQLPQGTVLIGNELARELGI 174
Query: 172 SPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFV 231
P G + + ++SYTV G+ D V M L+ AQ V+ I +
Sbjct: 175 RPGGRIRLVAATGVAESYTVSGILDFGIKDLSRRWVLMPLRAAQSLLGYRLDVTEIYLQT 234
Query: 232 KDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY--ES 270
D E + G+ WQ + ++
Sbjct: 235 DDLF--EADRLAALAAARTGLDADSWQASNSQLVTALRSQT 273
>gi|182415456|ref|YP_001820522.1| hypothetical protein Oter_3645 [Opitutus terrae PB90-1]
gi|177842670|gb|ACB76922.1| protein of unknown function DUF214 [Opitutus terrae PB90-1]
Length = 402
Score = 62.5 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 42/252 (16%), Positives = 87/252 (34%), Gaps = 12/252 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ R +IVA R L N+ S ++ +G++IGV A+I ++S+ NG + + +V
Sbjct: 1 MRFRSIIIVALRALRRNKLR------SMLTALGIIIGVAAVIAMVSIGNGAKAQVEAQVA 54
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ +V+ V L + +S +
Sbjct: 55 SLGQNVITVFSGSFTGGGMRGGWGSAPTLTVEDALAIGNEVPGAIAVSPEVRDRNQVLAN 114
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+++ L N S YG + + +D+ +++ K + + P+G
Sbjct: 115 GLNWNTLVNGESPDYGEIRGWKVASGTMFTDQDVRSVAKVAVIGKTIADQLFPNEDPIGQ 174
Query: 183 GIRSKSYTVLG------MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
IR ++ F + +V + + VS I V +
Sbjct: 175 TIRIRNIPFKVVGLLEAKGFNLFGQDQDDIVIVPYTSHMKRLSRRTNVSSILVQAPSAEQ 234
Query: 237 IEKTHENIVRIL 248
I++ + I +L
Sbjct: 235 IQRVQDEITDLL 246
>gi|260549059|ref|ZP_05823280.1| macrolide transporter [Acinetobacter sp. RUH2624]
gi|260407787|gb|EEX01259.1| macrolide transporter [Acinetobacter sp. RUH2624]
Length = 664
Score = 62.5 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 40/259 (15%), Positives = 87/259 (33%), Gaps = 11/259 (4%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + ++R F ++ +G++IG+ +++ V+++ NG ++ +++ + G+ +
Sbjct: 271 AFQMALLSMNAHRMRTF------LTMLGIIIGIASVVTVVALGNGSQKQILENISGLGTN 324
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + D AN +P L + VS + S + + +
Sbjct: 325 TITVFQGRGFGDNSKTANFKTLVPADADALMTQPYVSAVSPMVSTSKTMRYQQNEANATI 384
Query: 128 Y-LQNSFSRFYGNVSNDFDRGKGVII---GKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ N F G V D + +D+ + + +P G V +G
Sbjct: 385 NGVSNDFFDVKGLVFKDGQTFDQRSVRDRSQDVVIDTNTQKQFFSDGTNPIGQVVLLGSV 444
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ ++ D VYM + V I V + D +
Sbjct: 445 PA-RIIGIVEPQTSSMGSDDTLNVYMPYTTVMSRMLGQAHVRNIVVRINDKYSTSAAENA 503
Query: 244 IVRILGNGVVVIDWQQRYQ 262
IV +L D
Sbjct: 504 IVNLLTQRHGAQDIFTMNS 522
>gi|255531132|ref|YP_003091504.1| hypothetical protein Phep_1225 [Pedobacter heparinus DSM 2366]
gi|255344116|gb|ACU03442.1| protein of unknown function DUF214 [Pedobacter heparinus DSM 2366]
Length = 406
Score = 62.5 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 36/263 (13%), Positives = 91/263 (34%), Gaps = 3/263 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
E +A R + + F + I+ GVM+ + +++ ++++ GF+ ++ ++V G G
Sbjct: 4 EYFIAGR-IAIKSERTFSKLIVRIAIAGVMLSLAVMMLSVAIIKGFKTEIQEKVRGYIGD 62
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFV-SGQAFVSGLSSGGSGVLVRGISNSDF 126
V + + +K P V Q + + + + V GI+
Sbjct: 63 VRVFKYDLNNSFELSPFVPAKETLAQLKNNPDVEFFQPYATKPAIISANNEVEGINFKGI 122
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
N V+ + + + + + R
Sbjct: 123 DKTFNWDYIRRHLVNGKVIDFTDSVKASKEILISQFTANRLKLKVGDDFIMYFVQNPPRK 182
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHENIV 245
+ + ++G++ + + D V L + N + N + G+E+ +KD +++ +I
Sbjct: 183 RPFKIVGIYDIGVEEIDKNFVIGDLNIIRRLNNWKANEIGGLEIRIKDFSRLKEVSTHIY 242
Query: 246 RILGNGVVVIDWQQRYQIFFSCY 268
+ + + F+
Sbjct: 243 ENMELKLKSESVSDYFPAIFTWL 265
>gi|300773585|ref|ZP_07083454.1| ABC superfamily ATP binding cassette transporter, permease
[Sphingobacterium spiritivorum ATCC 33861]
gi|300759756|gb|EFK56583.1| ABC superfamily ATP binding cassette transporter, permease
[Sphingobacterium spiritivorum ATCC 33861]
Length = 406
Score = 62.5 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 40/269 (14%), Positives = 95/269 (35%), Gaps = 9/269 (3%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A R F ++ F + ++ ++ + A+I+ ++V+ GF++++ ++ G
Sbjct: 1 MNFPYFLAQRITFLGKR-TFSKLIVRVTVSAFVLAIAAMILSVAVLRGFKDEITEKQRGF 59
Query: 65 NGHVVIQQKY----YPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
G +++ ++ Y R+D I V ++ G V
Sbjct: 60 FGDILVTKQDLNSSYENTPMSLSKARMDAIRTSPNVQSIYPFATKAGIMNVNGEVEGVLL 119
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + DF+ G ++ + K+ + +
Sbjct: 120 KGVDSTYDQRYLSKTIVEGDTIDFNAENGANTQILISSYFAKRMRLKL---GDDFIMYFV 176
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEK 239
+R + + V G+F + D V +L + NL++ G E+ V+D + +
Sbjct: 177 QEPVRKRKFVVKGIFNTGSQELDKVYVVGALSLIRRLNNLDDQEAGGYEIRVRDFEKLVP 236
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCY 268
T E + L + + ++ F
Sbjct: 237 TTEQVNDHLPIDLNARNIVEQMPDIFEWL 265
>gi|297526989|ref|YP_003669013.1| protein of unknown function DUF214 [Staphylothermus hellenicus DSM
12710]
gi|297255905|gb|ADI32114.1| protein of unknown function DUF214 [Staphylothermus hellenicus DSM
12710]
Length = 404
Score = 62.5 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 46/259 (17%), Positives = 97/259 (37%), Gaps = 13/259 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + +A + L + + ++ IG+ IG +ALI + SV +G+ +++++
Sbjct: 1 MFISDIIRLAIKTLSEKKVR------AVLTIIGIAIGPLALITINSVTSGYSRYIVQQIQ 54
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G ++V+ + L I V+ PF S Q + V + ++
Sbjct: 55 GFGQNLVVVMSTDEYTVTEDDLEFLKTINGVVDASPFYSTQGTMRIG-GKEEEVFIYAVN 113
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S G + + + K ++ + G + +++S G
Sbjct: 114 YDFLFKAIPSLKISMGEIPSPTEISKCIVGHDIAYNDEGREVYGLGDVISVKVVKVKSGG 173
Query: 183 GIRSKSYTVLG-----MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
+ K ++ + + +++S+ A+ ++ SGI ++VKDP I
Sbjct: 174 ELEIKHVSLAISAILEKYGGAALLNPDKTIFISMNGAEKLLGVK-KWSGILLYVKDPSMI 232
Query: 238 EKTHENIVRILGNGVVVID 256
I I G V VI
Sbjct: 233 NNVTNTIRNIYGRSVDVIS 251
>gi|24213984|ref|NP_711465.1| lipoprotein releasing system permease [Leptospira interrogans
serovar Lai str. 56601]
gi|45658274|ref|YP_002360.1| lipoprotein releasing system, permease component [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|24194847|gb|AAN48483.1| permease component of lipoprotein releasing system [Leptospira
interrogans serovar Lai str. 56601]
gi|45601516|gb|AAS70997.1| lipoprotein releasing system, permease component [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
Length = 412
Score = 62.5 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 40/280 (14%), Positives = 89/280 (31%), Gaps = 27/280 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A R + K +++ G+++G A I++ V+ GFR ++ +++ + H+
Sbjct: 2 WFIAIRQMLVRGKQTLTTLS------GIVLGTAAFIIISGVLLGFRGYLVDQLINSDCHI 55
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
I + + I G ++ S + +
Sbjct: 56 RISSRQEIIQPNAMDDLFPGENVFWISPPSGKRGSNHLNNASLWYERLEQDKEVEAYSPQ 115
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDL-------------------ARNLGISIGDKIN 169
+ F G+ + + L R + K+
Sbjct: 116 VSGRIFLFSGSNQEAGKIIGIIPSRQTLITPLADYIIEGSVESLSAGNRIVLGDGLAKLL 175
Query: 170 ILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV 229
L + + + G+FR D+G+ Y L E QL ++ I V
Sbjct: 176 GLGLNKTIWLTSGLQEKTPFRISGIFRSGNKALDDGIAYGLLSEVQLLTAQSGMITDIAV 235
Query: 230 FVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+KD + + I + ++ W++ FF+ ++
Sbjct: 236 RLKDVNRSLQKAGEWKSISDD--KILSWEEANSNFFAIFK 273
>gi|78187617|ref|YP_375660.1| putative ABC transporter, integral membrane protein [Chlorobium
luteolum DSM 273]
gi|78167519|gb|ABB24617.1| putative ABC transporter, integral membrane protein [Chlorobium
luteolum DSM 273]
Length = 422
Score = 62.1 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 44/294 (14%), Positives = 87/294 (29%), Gaps = 43/294 (14%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +A R+L R+ S + IGV + M LI +S+ G + ++ ++
Sbjct: 1 MLKTL-FQIAIRHLLGRRRQ------SLTTIIGVAVSTMVLITTISLTRGLLDSFVETII 53
Query: 63 GINGHV--------------------------VIQQKYYPLVDYQFIANRLDFIPDVIKV 96
+ H+ V + + + L +
Sbjct: 54 DVAPHITLKGEKIDPVPVNVLAKARPSSVAFVVDNIEKLERDEVRSYRRILSLLAAPPYD 113
Query: 97 LPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDL 156
L + +V G L + + + D L
Sbjct: 114 LRVTAASPYVESQVMLVKGRLNEPLLLKGVDLEREDSISGINGKLTEGDAALFARTSNGL 173
Query: 157 ARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQL 216
++ ++ + + G + V G+F D VY SL+ AQ+
Sbjct: 174 LVGRTVARDMELKLNDEVTIIPGTGPS---RQCKVSGIFFSGVNATD-NSVYSSLKLAQI 229
Query: 217 YFNL-ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQ---IFFS 266
+ + VSGI + V+DP + + G + WQ+ F+
Sbjct: 230 IEGMPPDKVSGIALKVQDPLDNTLLARELQSL--TGYRTLTWQEANSGVLSLFA 281
>gi|193222262|emb|CAL61117.2| Macrolide export ATP-binding/permease protein macB [Herminiimonas
arsenicoxydans]
Length = 648
Score = 62.1 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 41/266 (15%), Positives = 97/266 (36%), Gaps = 16/266 (6%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A R L +N S ++ +G++IGV ++I ++++ +G + ++++R+ + +++
Sbjct: 262 KMALRSLRAN------FFRSVLTLLGIVIGVASVIAMLAIGDGAKAEVVERISAMGSNLL 315
Query: 70 -----IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + + + I ++ VL V Q+ L G S S
Sbjct: 316 LVRPGAPNQRGFNSTATLVVDDVKAIDELPNVLAAVPEQSSSVTLRFGTSDAATSVTGTS 375
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
L + G ++ D + D +P G+ + +
Sbjct: 376 AKFPLARQWPVAQGTFFSEDDETNYAAVAVLGKTTATALFVD----SNPIGEFVLINNLL 431
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + +V++ + L + + + + V V+D D I+ T E +
Sbjct: 432 FQVVGIMSERGASPMGSDQDDVVFVPYSTSSLRLSGQRYLRNVTVAVEDVDRIDDTQEQV 491
Query: 245 VRILGNGVVVIDWQQRY-QIFFSCYE 269
++L +D+Q R E
Sbjct: 492 DKLLLERHGTVDYQIRNMASIMEAME 517
>gi|169634390|ref|YP_001708126.1| macrolide ABC transporter ATP-binding/membrane protein
[Acinetobacter baumannii SDF]
gi|169153182|emb|CAP02272.1| macrolide transport protein (ABC superfamily, atp_bind
(N-terminal), membrane (C-terminal)) [Acinetobacter
baumannii]
Length = 664
Score = 62.1 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/259 (13%), Positives = 82/259 (31%), Gaps = 11/259 (4%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + ++R F ++ +G++IG+ +++ V+++ NG ++ ++ + + +
Sbjct: 271 AFQMALLSMNAHRMRTF------LTMLGIIIGIASVVTVVALGNGSQQQILSNISSLGTN 324
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + D AN +P L + VS + S + + +
Sbjct: 325 TITVFQGRGFGDNSKTANFKTLVPADADALMTQPYVSAVSPMVSTSKTMRSQQNEANATI 384
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVII----GKDLARNLGISIGDKINILSPYGDVTPMGMG 183
++ + + +D+ + + +P G V +G
Sbjct: 385 NGVSNDYFDVKGLVFKDGQTFDQRSVRDRSQDVVIDTNTQKQFFSDGTNPIGQVVLLGSV 444
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ ++ D VYM + V I V + D +
Sbjct: 445 PA-RIIGIVEPQTSGMGSDDTLNVYMPYTTVMSRMLGQAHVRNIVVRINDKYSTSAAENA 503
Query: 244 IVRILGNGVVVIDWQQRYQ 262
IV +L D
Sbjct: 504 IVNLLTQRHGAQDIFTMNS 522
>gi|134094169|ref|YP_001099244.1| macrolide ABC transporter ATP-binding/membrane protein
[Herminiimonas arsenicoxydans]
Length = 655
Score = 62.1 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 41/266 (15%), Positives = 97/266 (36%), Gaps = 16/266 (6%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A R L +N S ++ +G++IGV ++I ++++ +G + ++++R+ + +++
Sbjct: 269 KMALRSLRAN------FFRSVLTLLGIVIGVASVIAMLAIGDGAKAEVVERISAMGSNLL 322
Query: 70 -----IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + + + I ++ VL V Q+ L G S S
Sbjct: 323 LVRPGAPNQRGFNSTATLVVDDVKAIDELPNVLAAVPEQSSSVTLRFGTSDAATSVTGTS 382
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
L + G ++ D + D +P G+ + +
Sbjct: 383 AKFPLARQWPVAQGTFFSEDDETNYAAVAVLGKTTATALFVD----SNPIGEFVLINNLL 438
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + +V++ + L + + + + V V+D D I+ T E +
Sbjct: 439 FQVVGIMSERGASPMGSDQDDVVFVPYSTSSLRLSGQRYLRNVTVAVEDVDRIDDTQEQV 498
Query: 245 VRILGNGVVVIDWQQRY-QIFFSCYE 269
++L +D+Q R E
Sbjct: 499 DKLLLERHGTVDYQIRNMASIMEAME 524
>gi|189345861|ref|YP_001942390.1| hypothetical protein Clim_0317 [Chlorobium limicola DSM 245]
gi|189340008|gb|ACD89411.1| protein of unknown function DUF214 [Chlorobium limicola DSM 245]
Length = 422
Score = 62.1 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 43/293 (14%), Positives = 91/293 (31%), Gaps = 43/293 (14%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +A R+L R+ +I GV + M LI +S+ G + ++ ++
Sbjct: 1 MLKTL-LDIALRHLLGRRRQTLTTIT------GVAVSTMVLITTISLTRGLLDSFVETIV 53
Query: 63 GINGHVVIQQKYYP--------------------LVDYQFIANRLDFIPDVIKVLPFVSG 102
+ H+ I+ + + Q L++ + +
Sbjct: 54 NVAPHITIKGEKTNSVPVDILTRQGSSAVVLVEDNIRKQEREEVLNYRQILELFASSLYR 113
Query: 103 QAFVSGLSSGGSGVLVRGISNSDFSYL------QNSFSRFYGNVSNDFDRGKGVIIGKDL 156
+ S V+ + ++ L + G + L
Sbjct: 114 DEIRAVSPYVESQVMAVKGNRNEPVLLKGVDIQKEDLISGIGRKLQSGNLAAFEKTSNAL 173
Query: 157 ARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQL 216
++ K+ + + G + V G+F D + SL+ Q+
Sbjct: 174 LIGRTVARDMKLTLNDEVIIIPASGKS---RQCKVAGIFFTGVNAVD-NTIVGSLKLGQI 229
Query: 217 YFNLE-NAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQ---IFF 265
L N V+GI + ++DP E + R+ G + WQ + F
Sbjct: 230 IEGLPSNKVTGIALKIRDPFDNALLSEELQRV--TGYRSLTWQDQNASVLSLF 280
>gi|225010312|ref|ZP_03700784.1| protein of unknown function DUF214 [Flavobacteria bacterium
MS024-3C]
gi|225005791|gb|EEG43741.1| protein of unknown function DUF214 [Flavobacteria bacterium
MS024-3C]
Length = 376
Score = 62.1 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 39/245 (15%), Positives = 79/245 (32%), Gaps = 5/245 (2%)
Query: 31 ISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFI 90
++F V+IG AL +V+S +G +E + + + + K
Sbjct: 1 MTFFVVVIGAAALFIVLSGFSGLKEFSLSFSNSFDPALKVLPKSGKYFQLSSDQESAIGT 60
Query: 91 PDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGV 150
+ + ++G+ + + + + GN S + G+
Sbjct: 61 LQGVAFYAKEIEEKVYLSHRDKSQIAYLKGVDQNYRNVIGVDSVIYAGNWSLAGESVAGI 120
Query: 151 IIGKDLA-RNLGISIGDKINILSP---YGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGM 206
+ L+ KI I P G V G +++YT + D D
Sbjct: 121 GLANKLSLSIQDYYSPLKILIPRPLKKKGTVMGFGSAPYTEAYTTISGVYAIEADIDEKY 180
Query: 207 VYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFF 265
++ SL AQ +S + + + + + +IL VVV + Q +
Sbjct: 181 LFTSLDFAQQLLEKNPREISALNLKLAPGANEDLISLQLEQILLENVVVKNRAQLNSGLY 240
Query: 266 SCYES 270
+
Sbjct: 241 KMLNT 245
>gi|124268906|ref|YP_001022910.1| transmembrane ATP-binding ABC transporter protein [Methylibium
petroleiphilum PM1]
gi|124261681|gb|ABM96675.1| transmembrane ATP-binding ABC transporter protein [Methylibium
petroleiphilum PM1]
Length = 661
Score = 62.1 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 42/264 (15%), Positives = 97/264 (36%), Gaps = 15/264 (5%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A R L +N S ++ +G++IGV ++I ++++ +G ++++I R+ + +++
Sbjct: 274 KMALRSLRAN------LFRSVLTLLGIVIGVGSVIAMLAIGDGAKQEVINRISAMGSNLM 327
Query: 70 IQQKYYPLVDYQFIANRLD-----FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + P L I V VL V Q + L G+ S
Sbjct: 328 LVRPGAPNQRGFNSTATLVVADVAAIDQVPNVLAAVPEQNSSATLRYSGADYSTSINGTS 387
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
L + G+ + D + ++ + +P G+ + +
Sbjct: 388 SKFPLARQWPVAQGSFFSAEDEASYATVAV---LGQTVAKALFPDGANPVGEYVLVNNLL 444
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + +V++ + L + + + + V V D I++T E +
Sbjct: 445 FQVVGVMTARGASPMGSDQDDIVFVPYATSSLRLSGQRFMRNVTVAVDDVSRIDETQEAV 504
Query: 245 VRILGNGVVVIDWQQRY-QIFFSC 267
+L + V+D+Q R
Sbjct: 505 ESLLLDRHGVVDFQIRNMASIIEA 528
>gi|148767664|gb|ABR10824.1| lipoprotein releasing system transmembrane protein [Bartonella
silvicola]
Length = 150
Score = 62.1 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 59/139 (42%), Positives = 81/139 (58%)
Query: 18 SNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPL 77
N+K+ F SI S IS G+M+GV AL+VVM+VMNGFR +++ R+LG+NGH+V+Q
Sbjct: 2 PNKKHIFTSIISIISLTGIMLGVFALVVVMAVMNGFRTELLNRILGMNGHLVVQAISSDF 61
Query: 78 VDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFY 137
+Y + + L+ I V LP V GQA V G GG+G LVRG+ D L+
Sbjct: 62 SNYNSLISYLESINGVKFALPIVEGQALVQGNIGGGTGALVRGMRKRDLEKLETVSKNIK 121
Query: 138 GNVSNDFDRGKGVIIGKDL 156
FD+ +GV IG L
Sbjct: 122 SGTLAQFDKEEGVAIGIGL 140
>gi|281356708|ref|ZP_06243199.1| protein of unknown function DUF214 [Victivallis vadensis ATCC
BAA-548]
gi|281316835|gb|EFB00858.1| protein of unknown function DUF214 [Victivallis vadensis ATCC
BAA-548]
Length = 422
Score = 61.7 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 48/276 (17%), Positives = 96/276 (34%), Gaps = 15/276 (5%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
R E+ +AWRYL K +S+ + S +GV +GV L+VV++VM GF + M ++++
Sbjct: 1 MRTELFLAWRYL--KPKRNAVSLITVSSILGVTLGVAVLMVVLAVMTGFTDLMKQKLVET 58
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H I+ K+ ++ + S VL+ G +
Sbjct: 59 QAHFQIRDKWRRVISDPAPIIQAVEAAGGEAAAVIQSPVLVQYDRRRLDMQVLMFGAAEQ 118
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINI-----------LSP 173
D + + + L N+ + +
Sbjct: 119 DLRNRLDFNVALRAGKLSLGKNEVVISQNMALRWNVNVGDKLLFHSAGRLTGLVKFKPEG 178
Query: 174 YGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVK 232
++ +TV G++ + D+D ++++ L +A +L + + +
Sbjct: 179 GVELNSTASAYLPAEFTVAGIYSIGKYDFDRSVLFVGLDDAADLLDLPWGCATSVFGWGP 238
Query: 233 DPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
DP + E I + L V W++ Q
Sbjct: 239 DPFDQKALIEAIRKALPQ-YTVATWEEDNQQLLGVL 273
>gi|126466329|ref|YP_001041438.1| hypothetical protein Smar_1440 [Staphylothermus marinus F1]
gi|126015152|gb|ABN70530.1| protein of unknown function DUF214 [Staphylothermus marinus F1]
Length = 407
Score = 61.7 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 47/261 (18%), Positives = 98/261 (37%), Gaps = 13/261 (4%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+++F + +A + L + + ++ IG+ IG +ALI + SV +G+ ++++
Sbjct: 2 ITMFISDIIRLAMKTLSEKKVR------AILTIIGIAIGPLALITINSVTSGYSRYIVQQ 55
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ G ++V+ + L I V+ PF S Q + V +
Sbjct: 56 IQGFGQNLVVVMSTEEYTVTRDDLELLKTINGVVDASPFYSTQGTMRIG-GEEKDVFIYA 114
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ S G + + + K ++ + G + +++S
Sbjct: 115 VDYDFLFKAIPSLKIGEGEIPSSTEISKCIVGHDIAYNDEGKEVYKVGDVISIRVVKVKS 174
Query: 181 GMGIRSKSYTVLG-----MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD 235
G + K ++ + + ++MS+ A+ ++ SGI ++VKDP
Sbjct: 175 GGKLEIKHVSLAISAILEKYGGAALLNPDKTIFMSMNGAEKLLGVK-KWSGILLYVKDPS 233
Query: 236 AIEKTHENIVRILGNGVVVID 256
I I I G V VI
Sbjct: 234 MINNVTNTIRNIYGRSVDVIS 254
>gi|317051085|ref|YP_004112201.1| hypothetical protein Selin_0905 [Desulfurispirillum indicum S5]
gi|316946169|gb|ADU65645.1| protein of unknown function DUF214 [Desulfurispirillum indicum S5]
Length = 388
Score = 61.7 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/242 (11%), Positives = 69/242 (28%), Gaps = 12/242 (4%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A++ L +R S ++ +G+ V L V S GF + + +++ H
Sbjct: 4 SLHLAFQNLLRHRTR------SALTMLGIAASVGVLFAVFSFNRGFEQSLAQQLDQTGLH 57
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
++ + L + V + + + +LV + N
Sbjct: 58 ---FMVVPSGCAHEVASLVLHGNVIPRYIDDGVMEHVLATEGVALATPILVAQLPNPAQK 114
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ + + I + R+ + +
Sbjct: 115 RIDLIYGVDMKVLEEIKPDWD---ITGSIPRSAHEILLGYEVAQHTGLKAGDSFRYPQMD 171
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ D+ VY + AQ + I V V +P+ + E + +
Sbjct: 172 ELFHVAGVIGNTTSADDAFVYFPIATAQRLMESPGGATAIGVKVDNPERLGLVTEALEKA 231
Query: 248 LG 249
+
Sbjct: 232 VP 233
>gi|312883534|ref|ZP_07743259.1| hypothetical protein VIBC2010_11984 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309368757|gb|EFP96284.1| hypothetical protein VIBC2010_11984 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 355
Score = 61.7 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 44/221 (19%), Positives = 82/221 (37%), Gaps = 7/221 (3%)
Query: 50 MNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGL 109
MNGF + R+LG+ VI Q + P + P V G+A +
Sbjct: 1 MNGFEAQLKNRILGVLPQAVISQNNDKTDMSPLPPKFVSQFPSIQAPEPIVKGEAIIQSA 60
Query: 110 SSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN 169
+G+++ ++ S G + N V +G LAR +GIS+G+ +
Sbjct: 61 DQISAGIIIGIDPSNSD---PISRYLIAGKLVNLEAGEYRVFLGHSLARAMGISVGESVR 117
Query: 170 ILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIE 228
++ I S+ + D D ++ +Q+A + +SG
Sbjct: 118 LMVTSASQYTPLGRIPSQRLFKVAGIYNTGSDIDGQLMVTHIQDAGRLMGFSSKTISGWR 177
Query: 229 VFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+F +DP ++ + + + L G DW+ F +
Sbjct: 178 LFFEDPFSVSELSK---KTLPEGWKWQDWRAERGELFQAVK 215
>gi|261749660|ref|YP_003257346.1| putative lipoprotein releasing system transmembrane protein
[Blattabacterium sp. (Periplaneta americana) str. BPLAN]
gi|261497753|gb|ACX84203.1| putative lipoprotein releasing system transmembrane protein
[Blattabacterium sp. (Periplaneta americana) str. BPLAN]
Length = 396
Score = 61.7 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/267 (12%), Positives = 83/267 (31%), Gaps = 2/267 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
R + RY FS +K +++ F+S I + I +L ++SV +G ++ IK
Sbjct: 1 MRTSFYITIRYFFSKKKTNIVNLIIFLSIISLSISTFSLSTILSVFSGLKDLNIKFYQNN 60
Query: 65 NGH-VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
++ + ++ + N+ I + + ++G+ +
Sbjct: 61 YPDIMISSFNGKEIFFHENVLNKKMRSIKGIMCFSKTMEKKVFFHYKNEKYFFHLKGVDS 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + ++ + + L+ DKI S
Sbjct: 121 KYEEVMNQFKKITFQDKNDKNLSHNKLDLYVGLSSIFPFLFMDKIETDSMSISFFSYKKN 180
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
S + F + Q +NA +E+ + I+K +
Sbjct: 181 FFSIFNAKKVRIKGLFHFNQEIDQKYLFCDIQNLI-KKNAFHTLEIKIHQKKNIDKIKKI 239
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYES 270
+ + G + + + F+ +
Sbjct: 240 LKKKFGPKFRIKTRTEEERAFYKVINT 266
>gi|197335310|ref|YP_002155905.1| efflux ABC transporter, permease protein [Vibrio fischeri MJ11]
gi|197316800|gb|ACH66247.1| efflux ABC transporter, permease protein [Vibrio fischeri MJ11]
Length = 405
Score = 61.7 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/264 (15%), Positives = 93/264 (35%), Gaps = 20/264 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +AWR ++ N+ I + + I GV+ +I++M M+GF ++M+K +
Sbjct: 3 LKLAWRNVWRNKMRTSIMLGAMI------FGVVGVILMMGFMSGFIDNMVKNTIQWQTSH 56
Query: 69 VIQQKYYP--------LVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + ++D + +L +K + + + G+ + G
Sbjct: 57 IQIHQKNYALNPDINLVIDEEKEITQLLNDSSEVKAWSSRTLVNGMIASARSTRGIKING 116
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
I+ + + +++ + A L + +G K+ +
Sbjct: 117 INLQMEKKITPLSTHIIDGKWLSETGRNPILVSQKTAERLKLRVGSKVVLTFSDTTGEVT 176
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G + V G+F+ +D+ Y+ + Q I + + D +E
Sbjct: 177 GAA-----FRVSGIFKTASSTFDDANTYVRKADLQKV-GKVFQDHEIAILLNDNTKVEAF 230
Query: 241 HENIVRILGNGVVVIDWQQRYQIF 264
+ ++ + V DW Q I
Sbjct: 231 RDQLIANIDPDNNVQDWLQLQPIL 254
>gi|50086114|ref|YP_047624.1| macrolide ABC transporter ATP-binding/membrane protein
[Acinetobacter sp. ADP1]
gi|81827379|sp|Q6F813|MACB_ACIAD RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|49532090|emb|CAG69802.1| macrolide transport protein (ABC superfamily, atp_bind
(N-terminal), membrane (C-terminal)) [Acinetobacter sp.
ADP1]
Length = 664
Score = 61.3 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/252 (13%), Positives = 88/252 (34%), Gaps = 11/252 (4%)
Query: 2 SIFSRFE--VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
S+ R +A + ++R F ++ +G++IG+ +++ V+++ NG ++ +++
Sbjct: 263 SMLDRLSEAFQMALISMNAHRMRTF------LTMLGIIIGIASVVTVVALGNGSQKQILE 316
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
+ + + + + D AN +P L VS + S + +
Sbjct: 317 NISSLGTNTITVFQGRGFGDNSKTANFKTLVPSDADALSSQPYVTAVSPMVSSSKTIRYK 376
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ ++ ++ + +DL +++ I + + +
Sbjct: 377 ENEATATINGVSNDYFDVKGLTFKDGQSFDQRSVRDLTQDVVIDTNTQKQFFTDGSNPIG 436
Query: 180 M---GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
+ ++ ++ D+ VYM ++ V I V + D +
Sbjct: 437 QVVLLGSVPARIIGIVEPQTSSMGSDDSLNVYMPYTTVMSRMLGQSNVRNIIVRINDQYS 496
Query: 237 IEKTHENIVRIL 248
IV +L
Sbjct: 497 TSAAENAIVNLL 508
>gi|213963644|ref|ZP_03391896.1| putative membrane protein [Capnocytophaga sputigena Capno]
gi|213953772|gb|EEB65102.1| putative membrane protein [Capnocytophaga sputigena Capno]
Length = 434
Score = 61.3 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/273 (13%), Positives = 109/273 (39%), Gaps = 13/273 (4%)
Query: 6 RFEVIVAWRYLFSNR-KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
E +A R +FS K S ++ + +G++ +++ ++ G ++ + ++++
Sbjct: 24 NIEYFIAKRVIFSKGDKGTISSPIIKMAIAAIAVGMVMMLIAIATGIGLQQKIREKLVVF 83
Query: 65 NGHVVIQQK--------YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
+GH+ I P+ Q +P+V + + + ++ S +
Sbjct: 84 HGHIQIFDYGSNASQVTTKPISIQQDFYPNFSVVPEVTHIQAVATKGGIIRTENTYESIL 143
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
+ ++S +++ + + + +++ LA L + +GD+ + +
Sbjct: 144 AKGVGQDYNWSLIRDFITEGRTPNVSSEELTDEILMSTYLANRLHLKLGDRCQAIFLKDE 203
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPD 235
+++ ++G++ F ++D ++ ++ Q + + + E+F+KD D
Sbjct: 204 A---AQAPNQRNFKIVGLYNSGFQEFDASYIFTDIRHIQKINKWKADEIGNFELFIKDFD 260
Query: 236 AIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
IE + + +G + QR+ F
Sbjct: 261 RIEMVGKQVYGKIGTFLDSQTIIQRFPFIFEWL 293
>gi|182415746|ref|YP_001820812.1| hypothetical protein Oter_3938 [Opitutus terrae PB90-1]
gi|177842960|gb|ACB77212.1| protein of unknown function DUF214 [Opitutus terrae PB90-1]
Length = 414
Score = 61.3 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/280 (15%), Positives = 88/280 (31%), Gaps = 28/280 (10%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN--- 65
+ +A+R+L + ++ A +S +++GV +V + GF + + +LG +
Sbjct: 5 LRIAFRFLTAKKR------AMAMSLSCIVLGVGLFVVTQATTTGFEKLFVHTMLGTDGAI 58
Query: 66 -----GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
++ F + + + + V S+ + V
Sbjct: 59 QIKDRVQDTMRSMAAGNTASIFSIRQPEGRKYIEGIEEPELVSEAVRQFSNVVAVSTVLT 118
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDF---------DRGKGVIIGKDLARNLGISIGDKINIL 171
S L + R YG +D + + +
Sbjct: 119 GQVIVRSSLSHDTVRVYGIDFDDHVKVSDLERQIVRGQAATFRGAPTGALVGREMANRLQ 178
Query: 172 SPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFV 231
GD + + + Y V +F +YD V++ L EA+ S I++ V
Sbjct: 179 LAVGDSLVLETLDQQRRYRVSAIFETGVSEYDRSRVFVHLSEARSLLKKPTGASYIQINV 238
Query: 232 KDPDAIEKTHENIVRILGNGVVVIDWQQRYQIF---FSCY 268
D + + + +L WQ R + + F
Sbjct: 239 TDIERAPEDAARMEEVL--KHQTRPWQVREKTWLEVFRAL 276
>gi|78189737|ref|YP_380075.1| lipoprotein releasing system [Chlorobium chlorochromatii CaD3]
gi|78171936|gb|ABB29032.1| lipoprotein releasing system [Chlorobium chlorochromatii CaD3]
Length = 424
Score = 61.3 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/277 (11%), Positives = 82/277 (29%), Gaps = 30/277 (10%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH- 67
+ +A+ +L ++ + ++ +GV +G LI +++ G + +I +V+ H
Sbjct: 7 LRIAFVHLRERKRQ------TILAALGVAVGSAMLITTIAIARGSSDSVIAKVIDTAPHV 60
Query: 68 -------------------VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSG 108
+ ++ V ++ ++
Sbjct: 61 LITAERVTPLVPDNLVPRSKQHITMLTKNITPDEPEIIKNYSEVVQRISSIKELESVSPF 120
Query: 109 LSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKG-VIIGKDLARNLGISIGDK 167
+ S + + + + + + + K
Sbjct: 121 VVSKLLARNKTRFTPCIARGVVPELEAEIAGLKKNVLEPTALEELASTPNGIIVGELLAK 180
Query: 168 INILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSG 226
L + + T++G F F D Y++L AQ + N+VSG
Sbjct: 181 KLALRYRDRMVLVTKKSEEFPVTIVGRFSSGFNRKDESEAYINLALAQRMEGISSNSVSG 240
Query: 227 IEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQI 263
I + D T + + ++ +G W + +
Sbjct: 241 IGLRTTSVDKASITADEVEKL--SGYKSESWDETNRN 275
>gi|157376328|ref|YP_001474928.1| hypothetical protein Ssed_3196 [Shewanella sediminis HAW-EB3]
gi|157318702|gb|ABV37800.1| conserved hypothetical protein [Shewanella sediminis HAW-EB3]
Length = 410
Score = 61.3 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/264 (13%), Positives = 87/264 (32%), Gaps = 15/264 (5%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +AWR L+ N+ I +++ + G++ ++ ++ MNG +MI +
Sbjct: 3 IKLAWRNLWRNKLRTSIMLSA------MAFGLIGVVTMIGFMNGMYGNMIDNAISWQTSH 56
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
V + + + ++ ++ A+ G R +
Sbjct: 57 VQVHHQGFVDNPEINLTIVEPERITAELERMSEVIAWSERFIVDGMVASARSSRGVRVNG 116
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ +++ G + + ++ + V + +
Sbjct: 117 VDIDAEARVTPIASSVKEGSWLPAEGRHPVVVSSKTAQRLRLKLGSKVVITFSDADKDVT 176
Query: 189 ---YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK-----T 240
+ V G+F +D+G +Y+ + +E + I V + D +++
Sbjct: 177 GAAFRVSGIFSTPSTSFDDGNIYVRRSDLIAMAGIEGS-HEIAVLLDDSNSMSNALAVMV 235
Query: 241 HENIVRILGNGVVVIDWQQRYQIF 264
+ I I N V DWQQ +
Sbjct: 236 RDKIRLITSNENNVRDWQQIQPML 259
>gi|21672562|ref|NP_660629.1| hypothetical protein BUsg284 [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|25008722|sp|Q8K9N8|LOLC_BUCAP RecName: Full=Lipoprotein-releasing system transmembrane protein
lolC
gi|21623189|gb|AAM67840.1| hypothetical 43.3 kDa protein [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 399
Score = 61.3 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 101/268 (37%), Gaps = 8/268 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + RYL++ F I +S +G+ IG+ + I+ +S+MNGF+ +L
Sbjct: 1 MYKPIYIFIGLRYLWNPYLPNFKKIIIILSILGIGIGISSTIITISIMNGFQNKFKNDIL 60
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H++I K + F L V + + + + I
Sbjct: 61 SFIPHIIITNKNRNINKLNFPKETLKL----KNVEEITDFISKKVIIENKNEINIGEIIG 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + R IIG +LA+ + ++I D+I ++
Sbjct: 117 INIKNEKNLENYNIKKFLHTLHSRKYNAIIGSELAKKMHVNINDQIKLIVLPISKKKFLQ 176
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
+ + + D + ++ + A + N +N ++G ++ +KDP +
Sbjct: 177 NDLNIKLFKITGIFSTNSEIDEYQILINKKNALNFLNYNKNYITGWKIKLKDPFILNIQK 236
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYE 269
++ L +++DW+ + F +
Sbjct: 237 ---IKKLNKNFIILDWKTKKGELFKAMK 261
>gi|307316603|ref|ZP_07596046.1| protein of unknown function DUF214 [Sinorhizobium meliloti AK83]
gi|306897801|gb|EFN28544.1| protein of unknown function DUF214 [Sinorhizobium meliloti AK83]
Length = 413
Score = 60.9 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/280 (12%), Positives = 87/280 (31%), Gaps = 24/280 (8%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
R +A ++ + +++ +G I + AL M G ++D +++++
Sbjct: 1 MRLIFDIALTHVAGRGRQTLVAVIGVAVGVGFSIAMAAL------MQGGQDDFVRQLVDT 54
Query: 65 NGH----------------VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSG 108
H + + + + + + L
Sbjct: 55 MPHVDVTDEQRSALRQPAEDLFEAVAISGLRPRDDRRGIINPTKAVSWLEEWMPGRLAGV 114
Query: 109 LSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKI 168
L+ G + ++ + DF+ G + +
Sbjct: 115 LNVQGVIRYSGREVGAVVIGIEPEKEVKVSPIVEDFESGSFAALAAGGNNVVIGDTMASR 174
Query: 169 NILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIE 228
+T + ++++ ++G+F D G Y+ L+ AQ+ N NA++ +
Sbjct: 175 LGAGLGDTITAVSSEGLARNFKIVGLFHTGTTARDEGEAYVLLKNAQILSNRPNAINEVR 234
Query: 229 VFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + DP+A + LG V WQ+ +
Sbjct: 235 IKLDDPNAAPTIARRVEAELGYKTVA--WQEANESILEAL 272
>gi|313625493|gb|EFR95225.1| ABC transporter, permease protein [Listeria innocua FSL J1-023]
Length = 246
Score = 60.9 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/248 (13%), Positives = 86/248 (34%), Gaps = 20/248 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + AW+ L +++ +F ++ +G++IGV ++I+++S+ NG +++ +
Sbjct: 7 MKM--------AWKQLKASKLRSF------LTMLGIIIGVASVILLVSLGNGVTKEVDDQ 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + +++ + ++ + + ++ V + + +
Sbjct: 53 MGDLGSNLITVVNSSVNPNDKYTYDEVMKYQNIDGVKSVSPELSGQVNATYDYKNSSNKV 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
I +D S G D G + +G ++ + T
Sbjct: 113 IGTNDQYKAARSLEMKEGRFLLPIDTEYGQKVAV-----IGSTVASDLFGFGNPIGETIR 167
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G+ K VL + +++ + AQ + V I V K D ++
Sbjct: 168 LNGMPYKVVGVLKEKGASMMGSSDDQIFIPISSAQRLL-KDTNVRTIYVETKSADDVDFV 226
Query: 241 HENIVRIL 248
+ L
Sbjct: 227 VNTLESRL 234
>gi|85714937|ref|ZP_01045922.1| hypothetical protein NB311A_11212 [Nitrobacter sp. Nb-311A]
gi|85698134|gb|EAQ36006.1| hypothetical protein NB311A_11212 [Nitrobacter sp. Nb-311A]
Length = 411
Score = 60.9 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/284 (16%), Positives = 89/284 (31%), Gaps = 28/284 (9%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ + +AW ++ + + ++ GV+ GV I++ ++M G + D IK
Sbjct: 1 MTLI----LTIAWTHIRHRTRQ------TMVAIAGVITGVGFSIMMAAMMEGSQNDFIKT 50
Query: 61 VLGINGHV----------------VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQA 104
++ H+ V + + + + + +I L A
Sbjct: 51 LVDALPHISVTDELREPTRQPANIVYRAAEFHGLTPKARRPGIKNPMAIIASLQTWIPGA 110
Query: 105 FVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISI 164
+ + S R + N+S +G + + L
Sbjct: 111 LTASVQSKAVLRYARRNLTISIVGIDPRTEVGVSNLSTHMRQGTLSSLYRASNAILLGDR 170
Query: 165 GDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAV 224
+VT + + V+G F F D Y+ L+ AQ+ V
Sbjct: 171 LANKIGARVNSNVTLVSAEGAVMTARVVGTFHSGFRITDETTGYVLLKTAQILEMQTGIV 230
Query: 225 SGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ I V DP E I G I WQ+ + S
Sbjct: 231 NEIRVRTSDPMNARLISERIGEQ--TGYKSISWQESQEDLLSTI 272
>gi|326800936|ref|YP_004318755.1| hypothetical protein Sph21_3547 [Sphingobacterium sp. 21]
gi|326551700|gb|ADZ80085.1| protein of unknown function DUF214 [Sphingobacterium sp. 21]
Length = 406
Score = 60.9 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/266 (14%), Positives = 96/266 (36%), Gaps = 3/266 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F + +A R S + + ++ G+M+G+ +I+ ++++ GF+ +I++ G
Sbjct: 1 MNFPLYLANRISKSG-ARKYSRLIVRVAIAGIMLGLAVMILAIAILKGFKGSIIEKERGF 59
Query: 65 NGHVVIQQKY-YPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
NG + I + + + R D + + K+ AF + + + G+
Sbjct: 60 NGDITIYKHNLNNSYESSPFSIRTDSLLLIKKIAGVKELNAFATKPGIINAEDEIEGVVL 119
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
N V + I + + L + +
Sbjct: 120 KGIDSAYNQEKLRKILVEGNVINFTDSIPAQQQILISRYTANRLKLKLGDDFLMYFVQEP 179
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLENAVSGIEVFVKDPDAIEKTHE 242
+R + +T++G++ + + D V L + +N V G E+ +E+ ++
Sbjct: 180 LRKRKFTIVGIYNLGVEEIDKTYVIGDLSLIRRLNKWSDNEVGGYEIMTSHFGKVEEINQ 239
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCY 268
I+ L ++ + ++ F
Sbjct: 240 RILDALPIQLLSVTVVSQFPEIFDWL 265
>gi|59711713|ref|YP_204489.1| ABC transporter permease [Vibrio fischeri ES114]
gi|59479814|gb|AAW85601.1| ABC transporter permease [Vibrio fischeri ES114]
Length = 405
Score = 60.9 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/264 (15%), Positives = 94/264 (35%), Gaps = 20/264 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +AWR ++ N+ I + + I GV+ +I++M M+GF ++M+K +
Sbjct: 3 LKLAWRNVWRNKMRTSIMLGAMI------FGVVGVILMMGFMSGFIDNMVKNTIQWQTSH 56
Query: 69 VIQQKYYP--------LVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + ++D + L +K + + + G+ + G
Sbjct: 57 IQIHQKNYALNPDINLVIDEEKEITPLLNDSSDVKAWSSRTLVNGMIASARSTRGIKING 116
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
I+ + + +++ + A L + +G K+ +
Sbjct: 117 INLQMEKKITPLSAHIIDGEWLSETGRNPILVSQKTAERLKLRVGSKVVLTFSDTTGEVT 176
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G + V G+F+ +D+ Y+ + Q I + + D +E
Sbjct: 177 GAA-----FRVSGIFKTSSSTFDDANTYVRKADLQKV-GKVFQDHEIAILLNDNTKVEAF 230
Query: 241 HENIVRILGNGVVVIDWQQRYQIF 264
++++ + + V DW Q I
Sbjct: 231 RDHLITNINSDNSVQDWLQLQPIL 254
>gi|189499394|ref|YP_001958864.1| hypothetical protein Cphamn1_0418 [Chlorobium phaeobacteroides BS1]
gi|189494835|gb|ACE03383.1| protein of unknown function DUF214 [Chlorobium phaeobacteroides
BS1]
Length = 422
Score = 60.9 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/283 (15%), Positives = 89/283 (31%), Gaps = 36/283 (12%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH--- 67
+A+R+L R+ + + GV + M LI +S+ G + ++ ++ + H
Sbjct: 8 IAFRHLTGRRRQ------TLTTMTGVAVSTMVLITTISLTRGLLDSFVETIVDVAPHITI 61
Query: 68 --------------------VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVS 107
++ + + + N + + + A
Sbjct: 62 KGEPVEPPPVDLLGSAGGSRYAFIEENIQKEERKEVRNYRQVLSILNSAEYASAVTASSP 121
Query: 108 GLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK 167
+ S + + V G K L
Sbjct: 122 YVVSRVIMIKGNTNQPILIKGVNIEQENAISKVGQQLTAGDLAFFEKTPNALLVGKTVAD 181
Query: 168 INILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSG 226
L + +V+ + ++ V G+F D VY+SL+ AQ+ L + V+G
Sbjct: 182 DLGLELHDEVSVVPASGPARQCKVAGVFFSGVNAVD-NTVYVSLKFAQILEGLPADKVTG 240
Query: 227 IEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQ---IFFS 266
I + V +P ++ + RI G + WQ+ F+
Sbjct: 241 IGLKVSEPLVNQELARELERI--TGYISDTWQEENASVLSLFN 281
>gi|149280334|ref|ZP_01886455.1| ABC transporter, permease [Pedobacter sp. BAL39]
gi|149228883|gb|EDM34281.1| ABC transporter, permease [Pedobacter sp. BAL39]
Length = 406
Score = 60.9 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/263 (13%), Positives = 90/263 (34%), Gaps = 3/263 (1%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
E +A R + F + I+ GVM+ + +++ ++++ GF+ ++ ++V G G
Sbjct: 4 EYFIASR-IAIKSSRTFSKLIVRIAIAGVMLSLAVMMLSVAIIKGFKTEIQEKVRGYIGD 62
Query: 68 -VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
+ + + + I + K Q++ + + + V GI+
Sbjct: 63 VRIFKFDLNNSFELSPFVPGAETISKLKKNPQVEYYQSYATKPAIISANDEVEGINFKGV 122
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ VS + + + + R
Sbjct: 123 DKNYHWDYIREHLVSGKVINFADSAAAMNQIMISQFTANRLKLKTGDDFIMYFVQNPPRV 182
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHENIV 245
+ ++G++ + + D G V + + + + + GIEV +K+ ++ T +I
Sbjct: 183 RKLKIVGIYNIGVEEIDKGFVIGDINVIRRLNKWKYDEIGGIEVRIKNFSKLKTTSMDIY 242
Query: 246 RILGNGVVVIDWQQRYQIFFSCY 268
L + + + F+
Sbjct: 243 TNLEVNLRSESVSEFFPAIFTWL 265
>gi|297528716|ref|YP_003669991.1| hypothetical protein GC56T3_0354 [Geobacillus sp. C56-T3]
gi|297251968|gb|ADI25414.1| protein of unknown function DUF214 [Geobacillus sp. C56-T3]
Length = 400
Score = 60.9 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/269 (12%), Positives = 92/269 (34%), Gaps = 17/269 (6%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + + +A+ + +++ S ++ IG++IGV A+IV++S+ G + +
Sbjct: 1 MKMSVLESIKIAFSSVNAHKMR------SILTIIGIVIGVAAVIVIVSIGKGGENMLKSQ 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
++G G + + + L+ + + + + + + L
Sbjct: 55 IVGPGGDTIQVYYEPSNEELNANPDILEESAFTEQDINALKQIQNIKNVVAASKDFLPVQ 114
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + Y N+ + + D +++ + + P+
Sbjct: 115 YRKKYINGTIYGINDSYINIHKLNIQSGRMFNSTDFIGERRVALISNGLKEELFPNKNPI 174
Query: 181 GMG----IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
G + + R VY+ + + +N S + + V +P+
Sbjct: 175 GSIIRIGSQPVEIVGVLEERKNLFSVGLKEVYIPWKTWRTISG-KNNFSEVTIEVSNPNL 233
Query: 237 IEKTHENIVRILG------NGVVVIDWQQ 259
+++ + +L N VI+ ++
Sbjct: 234 LKEVGDEATSMLNRMHNTENRYKVINIKE 262
>gi|15805501|ref|NP_294197.1| hypothetical protein DR_0474 [Deinococcus radiodurans R1]
gi|6458160|gb|AAF10053.1|AE001906_9 conserved hypothetical protein [Deinococcus radiodurans R1]
Length = 386
Score = 60.9 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/241 (13%), Positives = 71/241 (29%), Gaps = 12/241 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+AWR L R + ++ +G+ + V +++V +S+ G R+ +++ GI +
Sbjct: 7 WQLAWRGLTRRRVR------TALTTLGITVAVASMVVFLSLGEGIRKVFAEQLSGIGPDI 60
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ L + + + VRG + S
Sbjct: 61 QVSLTGLTQG------MSLTPNVPQSLTGDLEKLAPELGIKTVTPVMMTVRGGFDPSQSV 114
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ S G + + + ++
Sbjct: 115 ILYSLPPAQGIGAVFPTVQGAQGRLLRPGDEQANVAVVGAKASQNLHLGLGSTLNLNRRA 174
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ + M+++ L+ Q + VS I V +KDP + T + I L
Sbjct: 175 SVKVVGVLKGDTGLADNMIFLPLEVQQKAEGVPGRVSMIAVKLKDPTQAKATAKVIAERL 234
Query: 249 G 249
Sbjct: 235 N 235
>gi|307822785|ref|ZP_07653016.1| ABC transporter related protein [Methylobacter tundripaludum SV96]
gi|307736389|gb|EFO07235.1| ABC transporter related protein [Methylobacter tundripaludum SV96]
Length = 651
Score = 60.9 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/252 (13%), Positives = 81/252 (32%), Gaps = 8/252 (3%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A R L +N + ++ +G++IGV A++ +++V G +E ++ ++ + +++
Sbjct: 266 AMRSLHAN------LFRTALTLLGIVIGVAAVVTMLAVGQGSQEKVLDQMRAMGTNILSI 319
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
+ P + L + + +
Sbjct: 320 RPGSPGLRGSSDVATLIPADADAIAELGNVEWTSPERNTRLTVRYGNIDYATGVQGVAPS 379
Query: 132 S--FSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
+ + FD + + + P G +G
Sbjct: 380 MTAVREWAVADGDFFDERDMRRYAPVIVLGQTVRQILFPDGGDPLGRYVMVGNIPFEVVG 439
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
+ + V++ L + +N + GI V V+D + I+ T + I +L
Sbjct: 440 VMEAKGADAQGSDRDDTVFVPLTTGLIRLFGQNYLGGITVKVRDVEQIDSTQQAISDLLI 499
Query: 250 NGVVVIDWQQRY 261
+ V D++ R
Sbjct: 500 SRHQVEDFRIRN 511
>gi|88801158|ref|ZP_01116702.1| ABC transporter, permease protein, putative [Reinekea sp. MED297]
gi|88776095|gb|EAR07326.1| ABC transporter, permease protein, putative [Reinekea sp. MED297]
Length = 407
Score = 60.6 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/272 (11%), Positives = 77/272 (28%), Gaps = 18/272 (6%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A+R + N++ I + +S G G + L + +SV NG +I +
Sbjct: 2 LKLAFRNILRNKRRT---ILTMLSMFG---GYVLLTLSISVQNGSYVQVIDFFTRDSTGH 55
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVS--------GLSSGGSGVLVRG 120
+ + + +++ Q + V V G
Sbjct: 56 AQISEVGYQDKPTLYKSVPETTDFYQQLMQVDGVQRATPRIVSSALAYGETKSFPVQVIG 115
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + + + + + + + ++
Sbjct: 116 VDVEKEARMSFLEEKVKTGQYLEVGPDSDGYYSALIGAAVARQLSLEMGDELILISQGAD 175
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G V + + VY+ L AQ +F + V D + ++
Sbjct: 176 GSMANDLYRVVGVVGSTE--GAEARNVYLPLAAAQSFFVMPEQAHYWAVLTSDYERSDQL 233
Query: 241 HENIVRILGNG--VVVIDWQQRYQIFFSCYES 270
+ + L + + W+ + F+ ++
Sbjct: 234 SQRLNSWLDGDSELEAVTWKVVSKEFYETMKA 265
>gi|261879512|ref|ZP_06005939.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270333851|gb|EFA44637.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 415
Score = 60.6 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/274 (16%), Positives = 94/274 (34%), Gaps = 10/274 (3%)
Query: 5 SRFEVIVAWR-YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F + +A R Y + A I+ G+ IG+ +IV +SV+ GF+ + +V G
Sbjct: 1 MNFPLFIARRIYGNHHSHQKVSRPAIAIAIAGIAIGLAVMIVSISVVLGFKHSIQNKVTG 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSG-QAFVSGLSSGGSGVLVRGIS 122
H+ + + + D + + I +P V + F + G+
Sbjct: 61 FGSHIQVTNFMSQMSSNHYPIVMNDSMINTISKIPGVKHVERFAYKQGILKTDSDFLGVM 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
N+ + + G + + ++ K+
Sbjct: 121 FKGVGPEFNADFICKNTIEGEVPSFSDKKSGNKILISKNMADKLKVKSGERIFAYFIDDS 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKT- 240
GIR + +T+ G+++ YD + + L E + SG EV V D + +++
Sbjct: 181 GIRVRRFTIQGVYQTNLNQYDELICFADLYTIVKLNGWESDQASGAEVMVNDFNKVDEVE 240
Query: 241 ---HENIVRILGNGVVVI---DWQQRYQIFFSCY 268
+ I + + + ++ FS
Sbjct: 241 SHFVKKINKTVDHNYETYSSQTIREINPQIFSWL 274
>gi|152980250|ref|YP_001352755.1| macrolide ABC efllux protein [Janthinobacterium sp. Marseille]
gi|151280327|gb|ABR88737.1| macrolide ABC efllux protein [Janthinobacterium sp. Marseille]
Length = 657
Score = 60.6 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/266 (15%), Positives = 100/266 (37%), Gaps = 16/266 (6%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A R L +N S ++ +G++IGV ++I ++++ +G ++++++R+ + +++
Sbjct: 271 KMALRSLRAN------FFRSVLTLLGIVIGVASVIAMLAIGDGAKQEVVERISAMGSNLL 324
Query: 70 -----IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + + + + I ++ VL V Q+ L G S S
Sbjct: 325 LVRPGVPNQRGFNSTATLVVDDVRAIDELPNVLAAVPEQSSSVTLRFGTSDTSTSVTGTS 384
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
L + G ++ D + G+ +P G+ + +
Sbjct: 385 AKFPLARQWPVAQGTFFSEEDESNYAAVAVLGKTVATALFGE----DNPIGEFVLVNNLL 440
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + +V++ + L + + + + V V++ D I+ T E +
Sbjct: 441 FQVVGVMSERGASPMGSDQDDVVFVPYSTSSLRLSGQRFLRNVTVAVENVDHIDNTQEEV 500
Query: 245 VRILGNGVVVIDWQQRY-QIFFSCYE 269
++L +D+Q R E
Sbjct: 501 DKLLLERHGTVDYQIRNMASIMEAME 526
>gi|315284304|ref|ZP_07872133.1| ABC transporter, permease protein [Listeria marthii FSL S4-120]
gi|313612053|gb|EFR86366.1| ABC transporter, permease protein [Listeria marthii FSL S4-120]
Length = 248
Score = 60.2 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/248 (13%), Positives = 86/248 (34%), Gaps = 20/248 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + AW+ L +++ +F ++ +G++IGV ++I+++S+ NG +++ +
Sbjct: 7 MKM--------AWKQLKASKLRSF------LTMLGIIIGVASVILLVSLGNGVTKEVDDQ 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + +++ + ++ + + ++ V + + +
Sbjct: 53 MGDLGSNLITVVNSSVNPNDKYTYDEVMKYQNIDGVKSVSPELSGQVNATFDYKSSSNKV 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
I +D S G D G + +G ++ + T
Sbjct: 113 IGTNDQYKAARSLEMKEGRFLLPIDTEYGQKVAV-----IGSTVASDLFGFGDPIGETVR 167
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G+ K VL + +++ + AQ + V I V K + ++
Sbjct: 168 LNGMPYKVVGVLKEKGASMMGSSDDQIFIPISSAQRLL-KDTNVRTIYVETKSAEDVDFV 226
Query: 241 HENIVRIL 248
+ L
Sbjct: 227 VNTLESRL 234
>gi|78484779|ref|YP_390704.1| hypothetical protein Tcr_0434 [Thiomicrospira crunogena XCL-2]
gi|78363065|gb|ABB41030.1| lipoprotein-releasing system transmembrane protein (LolC) family
protein [Thiomicrospira crunogena XCL-2]
Length = 425
Score = 60.2 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 51/277 (18%), Positives = 111/277 (40%), Gaps = 26/277 (9%)
Query: 6 RFEVIV--AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMS-------VMNGFRED 56
F +++ AWR L+ +R+ I+ ++ IG+ G+ L + + V N +
Sbjct: 9 PFSILINFAWRNLWRHRRRTLIT----LTTIGIGFGLAVLFIGIGDGSHNSMVRNAIKMG 64
Query: 57 MIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
+ G+ Y + + + + +L + V P +S Q S S +G
Sbjct: 65 EGHLTVQPRGYQEAPANYKFIHNGKALYQQLKDLLLEANVAPRISLQVLASTA-SNSTGA 123
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
++ G+ + + + +G++IG+ +AR L +G K+ I+
Sbjct: 124 MLEGMQSQLDTRTNMLKPFLIKGHWLTEEDHRGILIGQGMARKLKAKVGSKVVIM----- 178
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA------VSGIEVF 230
G +++ V G+F + D+ ++ +L + + E A V+ +F
Sbjct: 179 AGKQGGDSQAQLARVRGIFNAHVNEMDDFLIISNLSLSTEFLVGEGADPLLAPVTRFALF 238
Query: 231 VKDPDAIEKTHENIVRIL-GNGVVVIDWQQRYQIFFS 266
+ +PD + T + + L +VV++WQ+
Sbjct: 239 LNNPDDLSHTEAILEKALVDQNIVVLNWQEMMPQLVQ 275
>gi|150375898|ref|YP_001312494.1| hypothetical protein Smed_3748 [Sinorhizobium medicae WSM419]
gi|150030445|gb|ABR62561.1| protein of unknown function DUF214 [Sinorhizobium medicae WSM419]
Length = 416
Score = 60.2 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/280 (13%), Positives = 89/280 (31%), Gaps = 24/280 (8%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
R +A ++ + +++ +G I + AL M G ++D +++++
Sbjct: 4 MRLIFDIALTHVAGRGRQTLVAVIGVAVGVGFSIAMAAL------MQGGQDDFVRQLVDT 57
Query: 65 NGHVVIQQKYYPLVDYQ----------------FIANRLDFIPDVIKVLPFVSGQAFVSG 108
HV + + + + L +
Sbjct: 58 MPHVDVTDEQRTARRQPAEDLFEAVAISGLRPRDDRRGIINPTKAVSWLEEWMPGRLAAV 117
Query: 109 LSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKI 168
L+ G + ++ + DF+ G + +
Sbjct: 118 LNVQGVIRYSGREVGAVVIGIEPEKEMRVSPIVEDFESGSFSALAAGGNNVVIGDTMASR 177
Query: 169 NILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIE 228
+ +T + R++++ ++G+F D G Y+ L+ AQ+ N NA++ I
Sbjct: 178 LGAALGDTITAISSEGRARNFKIVGLFHTGTTARDEGEGYVLLKNAQILSNRPNAINEIR 237
Query: 229 VFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ + DP+A + LG V WQ+ +
Sbjct: 238 IKLDDPNAAPSIAHRVEVELGYKAVA--WQEANESILEAL 275
>gi|260061959|ref|YP_003195039.1| putative transmembrane permease [Robiginitalea biformata HTCC2501]
gi|88783521|gb|EAR14692.1| putative transmembrane permease [Robiginitalea biformata HTCC2501]
Length = 413
Score = 60.2 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 44/273 (16%), Positives = 100/273 (36%), Gaps = 11/273 (4%)
Query: 5 SRFEVIVAWRYLFSNR-KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
E+ +A R + S K+ + I+ + +G++ ++V ++ G + + ++V
Sbjct: 1 MNLELYIARRLIGSKEDKSTISAPIIKIAIAAIALGLLMMLVALATGVGLKYKIREKVSA 60
Query: 64 INGHVVIQQKYYP-------LVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
NGH+ I + + D ++ + V+ +A + G+
Sbjct: 61 FNGHIQIYNFDNNVSQVSVVPIARDQEFYPDFNLTDGVRHIQAVATKAGIIRTEDTFEGI 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
+ +G+ F + G+ V++ + LA L + +G + N L +
Sbjct: 121 IAKGVGPDYDWTAFRDFLVAGELPDYSGELGEEVLVSRLLANRLQLQVGSEFNSLFLKDE 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPD 235
+ + V G+F F ++D V+ ++ Q + + E+F+ D D
Sbjct: 181 DPSR--VPNRRRFRVAGIFDSGFEEFDGTYVFTDIRHIQRMYGWEPGEIGNFEIFLDDFD 238
Query: 236 AIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
AI + I + + +Y F
Sbjct: 239 AIGEKSAEIYGKTLSSLDTQTIIDKYYQIFEWI 271
>gi|325124511|gb|ADY84034.1| macrolide transport protein [Acinetobacter calcoaceticus PHEA-2]
Length = 664
Score = 60.2 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/259 (12%), Positives = 82/259 (31%), Gaps = 11/259 (4%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + ++R F ++ +G++IG+ +++ V+++ G ++ ++ + + +
Sbjct: 271 AFQMALLSMNAHRMRTF------LTMLGIIIGIASVVTVVALGKGSQQQILSNISSLGTN 324
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + D A+ +P L + VS + S + + +
Sbjct: 325 TITVFQGRGFGDNSKTASFKTLVPADADALMTQPYVSAVSPIVSTSKTMRYQQNEANATI 384
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVII----GKDLARNLGISIGDKINILSPYGDVTPMGMG 183
++ + + +D+ + + +P G V +G
Sbjct: 385 NGVSNDYFDVKGLVFKDGQTFDQRSVRDRSQDVVIDTNTQKQFFNDGTNPIGQVVLLGSV 444
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ V+ D VYM ++ V I V + D +
Sbjct: 445 PA-RIIGVVEPQTSGMGSDDTLNVYMPYTTVMSRMLGQSNVRNIVVRINDKYSTAAAENA 503
Query: 244 IVRILGNGVVVIDWQQRYQ 262
IV +L D
Sbjct: 504 IVNLLTQRHGAQDIFTMNS 522
>gi|16802241|ref|NP_463726.1| hypothetical protein lmo0195 [Listeria monocytogenes EGD-e]
gi|224503485|ref|ZP_03671792.1| hypothetical protein LmonFR_13417 [Listeria monocytogenes FSL
R2-561]
gi|255028761|ref|ZP_05300712.1| hypothetical protein LmonL_05441 [Listeria monocytogenes LO28]
gi|284803066|ref|YP_003414931.1| hypothetical protein LM5578_2823 [Listeria monocytogenes 08-5578]
gi|284996207|ref|YP_003417975.1| hypothetical protein LM5923_2772 [Listeria monocytogenes 08-5923]
gi|16409552|emb|CAC98410.1| lmo0195 [Listeria monocytogenes EGD-e]
gi|284058628|gb|ADB69569.1| hypothetical protein LM5578_2823 [Listeria monocytogenes 08-5578]
gi|284061674|gb|ADB72613.1| hypothetical protein LM5923_2772 [Listeria monocytogenes 08-5923]
Length = 402
Score = 60.2 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/248 (13%), Positives = 86/248 (34%), Gaps = 20/248 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + AW+ L +++ +F ++ +G++IGV ++I+++S+ NG +++ +
Sbjct: 7 MKM--------AWKQLKASKLRSF------LTMLGIIIGVASVILLVSLGNGVTQEVDDQ 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + +++ + ++ + + ++ V + + +
Sbjct: 53 MGDLGSNLITVVNSSVNPNDKYTYDEVMKYQNIDGVKSVSPELSGQVNATFDYKNSSNKV 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
I +D S G D G + +G ++ + T
Sbjct: 113 IGTNDQYKAARSLEMKEGRFLLPIDTEYGQKVAV-----IGSTVASDLFGFGDPIGETIR 167
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G+ K VL + +++ + AQ + V I V K + ++
Sbjct: 168 LNGMPYKVVGVLKEKGASMMGSSDDQIFIPISSAQRLL-KDTNVRTIYVETKSAEDVDFV 226
Query: 241 HENIVRIL 248
+ L
Sbjct: 227 VNTLESRL 234
>gi|189499579|ref|YP_001959049.1| hypothetical protein Cphamn1_0609 [Chlorobium phaeobacteroides BS1]
gi|189495020|gb|ACE03568.1| protein of unknown function DUF214 [Chlorobium phaeobacteroides
BS1]
Length = 422
Score = 60.2 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/277 (14%), Positives = 88/277 (31%), Gaps = 30/277 (10%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +AW +L ++ + ++ +GV +G L+ +++ G +++ +++ I H+
Sbjct: 7 LTIAWVHLRERKRQ------TILTALGVAVGSAMLVTTIAIAGGMSRNVVNKIIDIAPHI 60
Query: 69 VIQQKYYPLVDYQF-----------------IANRLDFIPDVIKVLPFVSGQAFVSGLSS 111
++ + + +A + V S
Sbjct: 61 IVSAERIEPLVPDNLLGSTGNFLGFVEKNITVAEKKTIKNYPDTVERIGSVGEVEIVSPF 120
Query: 112 GGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL 171
S ++VR S + ++N + +LA + +
Sbjct: 121 VTSNLIVRNRSRFTSCTAKGVLPEKEAGIANLGKKLVESNALAELAYTPDGILVGNLLAE 180
Query: 172 SPYGDVTPMGMGIRSK----SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSG 226
+ I TV+G F F D Y++L AQ + NAV+
Sbjct: 181 DLKASYHSRLLLISKNGLEFPVTVVGRFSTGFNAKDRQEAYINLALAQRIEGIAANAVTS 240
Query: 227 IEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQI 263
I + D + E + ++ G W + +
Sbjct: 241 IGLRTADVGRAGEVAEKVEQL--TGFQSESWDESNKN 275
>gi|293610312|ref|ZP_06692613.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827544|gb|EFF85908.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 664
Score = 60.2 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/259 (12%), Positives = 82/259 (31%), Gaps = 11/259 (4%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + ++R F ++ +G++IG+ +++ V+++ G ++ ++ + + +
Sbjct: 271 AFQMALLSMNAHRMRTF------LTMLGIIIGIASVVTVVALGKGSQQQILSNISSLGTN 324
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + D A+ +P L + VS + S + + +
Sbjct: 325 TITVFQGRGFGDNSKTASFKTLVPADADALMTQPYVSAVSPIVSTSKTMRYQQNEANATI 384
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVII----GKDLARNLGISIGDKINILSPYGDVTPMGMG 183
++ + + +D+ + + +P G V +G
Sbjct: 385 NGVSNDYFDVKGLVFKDGQTFDQRSVRDRSQDVVIDTNTQKQFFSDGTNPIGQVVLLGSV 444
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ V+ D VYM ++ V I V + D +
Sbjct: 445 PA-RIIGVVEPQTSGMGSDDTLNVYMPYTTVMSRMLGQSNVRNIVVRINDKYSTAAAENA 503
Query: 244 IVRILGNGVVVIDWQQRYQ 262
IV +L D
Sbjct: 504 IVNLLTQRHGAQDIFTMNS 522
>gi|77918429|ref|YP_356244.1| ABC transporter permease [Pelobacter carbinolicus DSM 2380]
gi|77544512|gb|ABA88074.1| ABC-type transport system, permease component [Pelobacter
carbinolicus DSM 2380]
Length = 400
Score = 60.2 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/271 (13%), Positives = 90/271 (33%), Gaps = 24/271 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+++A R + N +F ++ +G++IGV A+I ++++ NG + + ++ + ++
Sbjct: 6 LLLALRAIRRNLMRSF------LTILGIVIGVAAVITMVTLGNGATQSVSDQISSMGSNL 59
Query: 69 VIQQKYYPLVD-----YQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
++ +F + ++ I + I V+ S + + IS
Sbjct: 60 LMVMPGQRFGPGSGDAAKFKSADVEAIRNQIPAAKLVAPVVTTSATAVYQAENWSSAISG 119
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
S+ Y + + + L + + K +P G +
Sbjct: 120 SNDDYFEAGGWDLASGRTFTEAEQRSGRAVCVLGETVREKLFGK---QNPVGADIRIKQF 176
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ + + V M L+ Q + + + V D +I+ E
Sbjct: 177 SCEVIGLLKPKGQSAMGSDQDDTVVMPLRTVQRRLAGSQDIGRLMISVNDGASIDAVKEQ 236
Query: 244 ----------IVRILGNGVVVIDWQQRYQIF 264
I + V+D +Q +
Sbjct: 237 LTLLMRERRNIGESEDDDFQVMDTRQIAETL 267
>gi|16799311|ref|NP_469579.1| hypothetical protein lin0234 [Listeria innocua Clip11262]
gi|16412653|emb|CAC95467.1| lin0234 [Listeria innocua Clip11262]
Length = 402
Score = 60.2 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/248 (13%), Positives = 86/248 (34%), Gaps = 20/248 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + AW+ L +++ +F ++ +G++IGV ++I+++S+ NG +++ +
Sbjct: 7 MKM--------AWKQLKASKLRSF------LTMLGIIIGVASVILLVSLGNGVTKEVDDQ 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + +++ + ++ + + ++ V + + +
Sbjct: 53 MGDLGSNLITVVNSSVNPNDKYTYDEVMKYQNIDGVKSVSPELSGQVNATYDYKSSSNKV 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
I +D S G D G + +G ++ + T
Sbjct: 113 IGTNDQYKAARSLEMKEGRFLLPIDTEYGQKVAV-----IGSTVASDLFGFGNPIGETIR 167
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G+ K VL + +++ + AQ + V I V K + ++
Sbjct: 168 LNGMPYKVVGVLKEKGASMMGSSDDQIFIPISSAQRLL-KDTNVRTIYVETKSAEDVDFV 226
Query: 241 HENIVRIL 248
+ L
Sbjct: 227 VNTLESRL 234
>gi|325955319|ref|YP_004238979.1| hypothetical protein Weevi_1709 [Weeksella virosa DSM 16922]
gi|323437937|gb|ADX68401.1| protein of unknown function DUF214 [Weeksella virosa DSM 16922]
Length = 409
Score = 59.8 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 42/268 (15%), Positives = 96/268 (35%), Gaps = 4/268 (1%)
Query: 5 SRFEVIVAWRYLF-SNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F A + +NRKN I I + V++G++ ++ +S G R+ + ++
Sbjct: 1 MNFTWWFATKIARDTNRKNNLAGIIIGIGRVAVILGILVSMITISTGVGARKAIKNKLAD 60
Query: 64 INGHVVIQQKYYPLV-DYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
NGH+ I+ + + ++ F P ++ QA + + G+
Sbjct: 61 FNGHITIRNYNSNVSLNSDSLSIHQHFYPTFSQISEVEHVQAIANKSGVIRTEETFSGVV 120
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT-PMG 181
+ F + K + ++ + ++ K+ + S +
Sbjct: 121 FKGVGLDYDQTRFEEFLTKGRFPKFKNNELSDEVLLSEKMANELKLEVDSSFVMYFLRDD 180
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKT 240
+ + ++G+++ ++D+ + +Q Q N V EVFVKD + +E+
Sbjct: 181 AKPIYRRFHLVGLYKTDIKNFDDIYLIGDIQHIQRLNNWGPETVGAFEVFVKDIEKVEQV 240
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCY 268
I +G + Q +
Sbjct: 241 THKINDAIGYNLYAESAMQSFAQISEWI 268
>gi|315231345|ref|YP_004071781.1| ABC transporter permease [Thermococcus barophilus MP]
gi|315184373|gb|ADT84558.1| ABC transporter permease [Thermococcus barophilus MP]
Length = 407
Score = 59.8 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/254 (13%), Positives = 82/254 (32%), Gaps = 19/254 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A R L + + + +G++I V ++ ++S+ G R + + + + +
Sbjct: 6 IKIAIRNLTRRKLR------TLFTMLGIIIAVGSVTALVSITQGSRMAIEQELESTSNVL 59
Query: 69 VIQQ-------KYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+I + + I +++ I V V P + + ++
Sbjct: 60 MIMPGVSVSIIRAATSTMSEDIVRKIEKIDHVEAVNPALIKFTTIKYDDWILELTIMGVD 119
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ V + I+G LA + K +
Sbjct: 120 PKKAQKFFALRGLHLERGVFLRKNDRYKAILGYLLAHGKFATFDGKPLNWDITPGQRIII 179
Query: 182 MGIRSKSYTVL------GMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD 235
+ Y + + + MV + L Q F+ E +S ++V+V D
Sbjct: 180 YDDQGNPYEFKVVGNLEESGQSFLAGFLDMMVVVPLDTLQEMFHEEGKISIVDVWVDDVA 239
Query: 236 AIEKTHENIVRILG 249
I++ + I + +
Sbjct: 240 FIDEVKKEIEKEIP 253
>gi|193213803|ref|YP_001995002.1| hypothetical protein Ctha_0084 [Chloroherpeton thalassium ATCC
35110]
gi|193087280|gb|ACF12555.1| protein of unknown function DUF214 [Chloroherpeton thalassium ATCC
35110]
Length = 424
Score = 59.8 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 38/284 (13%), Positives = 94/284 (33%), Gaps = 31/284 (10%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A+ +L R+ F ++ +GV IG LI +SV +G ++ ++++ + HV
Sbjct: 7 FRIAFFHLNDRRRQTF------LTALGVAIGSAMLITTISVASGSSANIREKIIDSSPHV 60
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ K + + + + V V+ + + + + + N +
Sbjct: 61 SVFPKRVQRLIPENLVADQHSKNQITVVEKNVTTKDKPAIKAYTEVVATAQTLENVEAIS 120
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL----------------- 171
N + ++ + A+ +
Sbjct: 121 PFVMNKLIIRNKTRFKSCITRGVVPEREAQVANFEKIITSGSIEELSYTPNGIILGDVLA 180
Query: 172 -----SPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVS 225
+ + V+G+F+ F ++D M Y++L+ AQ + ++V+
Sbjct: 181 SDLRAKYRSRLDLVTEDGEIFPVIVVGVFQSGFSEFDKKMGYINLRLAQRIEGISASSVT 240
Query: 226 GIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
GI + D +A + ++ G W + + +
Sbjct: 241 GIGIKTNDINASGFVAATMEKL--TGYETESWDETNKNVLDFIK 282
>gi|256810194|ref|YP_003127563.1| protein of unknown function DUF214 [Methanocaldococcus fervens
AG86]
gi|256793394|gb|ACV24063.1| protein of unknown function DUF214 [Methanocaldococcus fervens
AG86]
Length = 395
Score = 59.8 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 38/252 (15%), Positives = 84/252 (33%), Gaps = 13/252 (5%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M I A++ + R S ++ IG++IGV+A++ ++S+ G + + +
Sbjct: 1 MKIEDIVAF--AFKNIKQKRTQ------SLLTIIGIVIGVLAIVSLISLGYGVQNYIHEE 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
++ + + + L + + V G +
Sbjct: 53 MMKMGSNKITILPVKQLGVPPSHLFTRKEVRAIENVKGIDKIMYGWYGGCEIEYNGEKKF 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+S + + + R G + L
Sbjct: 113 VSYFYANPSELRAVYEETGYDLEKGRWLENNDKYACVIGYGTAH-----NLFDREIDVGD 167
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ I+ K + V+G+ + D+ V ++L + F E+ + I V +K+ + IEK
Sbjct: 168 VIKIKDKKFKVVGILKQIGNQQDDNSVILNLDVGEDLFGNEDKFNIILVTIKEREDIEKV 227
Query: 241 HENIVRILGNGV 252
E+I + L
Sbjct: 228 SEDIKKALERSF 239
>gi|320535252|ref|ZP_08035376.1| efflux ABC transporter, permease protein [Treponema phagedenis
F0421]
gi|320147905|gb|EFW39397.1| efflux ABC transporter, permease protein [Treponema phagedenis
F0421]
Length = 448
Score = 59.8 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/285 (13%), Positives = 82/285 (28%), Gaps = 19/285 (6%)
Query: 4 FSRFEVIVAWRYLF--SNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+ + A R+L S R + + F + +G+ + ++ L++V+ V +G + R+
Sbjct: 1 MIKVPFLFALRFLGIGSGRSESNARKSLFGAVLGIGVSIIPLVIVLVVSDGMISGITSRM 60
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ + + P +Y+ + + + + I
Sbjct: 61 IELGSGHLQFVDLRPSTNYKNPQESYNQL-QNNYATFKGNCSNEYITGAWMQVNGNGIVI 119
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILS--------- 172
+ N ++ L SI I
Sbjct: 120 GKNGRKGGNIRAVSDNFFTENQAASQLLTVVAGSLEFTEKNSILLGKKIAEDLGITAGDS 179
Query: 173 ----PYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIE 228
+ V G+ + + D V+M L+ + + A++ I
Sbjct: 180 CRILTLFASPTGKSIPKLFVGKVSGVISSGYQELDALWVFMPLETGMKILSPDAALASIL 239
Query: 229 VFVKDPDAIEKTHENIV---RILGNGVVVIDWQQRYQIFFSCYES 270
V KDP E I L G WQ + F +++
Sbjct: 240 VQTKDPFDQAAMQEIIQTGMSNLPRGYSPFSWQDMNRSQFHSFQT 284
>gi|313621060|gb|EFR92158.1| ABC transporter, permease protein [Listeria innocua FSL S4-378]
Length = 245
Score = 59.8 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/248 (13%), Positives = 86/248 (34%), Gaps = 20/248 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + AW+ L +++ +F ++ +G++IGV ++I+++S+ NG +++ +
Sbjct: 7 MKM--------AWKQLKASKLRSF------LTMLGIIIGVASVILLVSLGNGVTKEVDDQ 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + +++ + ++ + + ++ V + + +
Sbjct: 53 MGDLGSNLITVVNSSVNPNDKYTYDEVMKYQNIDGVKSVSPELSGQVNATYDYKSSSNKV 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
I +D S G D G + +G ++ + T
Sbjct: 113 IGTNDQYKAARSLEMKEGRFLLPIDTEYGQKVAV-----IGSTVASDLFGFGNPIGETIR 167
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G+ K VL + +++ + AQ + V I V K + ++
Sbjct: 168 LNGMPYKVVGVLKEKGASMMGSSDDQIFIPISSAQRLL-KDTNVRTIYVETKSAEDVDFV 226
Query: 241 HENIVRIL 248
+ L
Sbjct: 227 VNTLESRL 234
>gi|46906427|ref|YP_012816.1| ABC transporter, permease protein [Listeria monocytogenes str. 4b
F2365]
gi|47092878|ref|ZP_00230661.1| ABC transporter, permease protein [Listeria monocytogenes str. 4b
H7858]
gi|226222824|ref|YP_002756931.1| membrane protein (ABC transporter component) [Listeria
monocytogenes Clip81459]
gi|254825892|ref|ZP_05230893.1| ABC transporter [Listeria monocytogenes FSL J1-194]
gi|254853687|ref|ZP_05243035.1| ABC transporter [Listeria monocytogenes FSL R2-503]
gi|254933034|ref|ZP_05266393.1| ABC transporter [Listeria monocytogenes HPB2262]
gi|254992653|ref|ZP_05274843.1| hypothetical protein LmonocytoFSL_05996 [Listeria monocytogenes FSL
J2-064]
gi|255519698|ref|ZP_05386935.1| hypothetical protein LmonocFSL_00440 [Listeria monocytogenes FSL
J1-175]
gi|300764938|ref|ZP_07074927.1| ABC transporter, permease protein [Listeria monocytogenes FSL
N1-017]
gi|46879691|gb|AAT02993.1| ABC transporter, permease protein [Listeria monocytogenes serotype
4b str. F2365]
gi|47018782|gb|EAL09532.1| ABC transporter, permease protein [Listeria monocytogenes str. 4b
H7858]
gi|225875286|emb|CAS03983.1| Putative membrane protein (putative ABC transporter component)
[Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|258607066|gb|EEW19674.1| ABC transporter [Listeria monocytogenes FSL R2-503]
gi|293584593|gb|EFF96625.1| ABC transporter [Listeria monocytogenes HPB2262]
gi|293595130|gb|EFG02891.1| ABC transporter [Listeria monocytogenes FSL J1-194]
gi|300514425|gb|EFK41483.1| ABC transporter, permease protein [Listeria monocytogenes FSL
N1-017]
gi|328468512|gb|EGF39518.1| hypothetical protein LM1816_04607 [Listeria monocytogenes 1816]
Length = 402
Score = 59.8 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/248 (13%), Positives = 86/248 (34%), Gaps = 20/248 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + AW+ L +++ +F ++ +G++IGV ++I+++S+ NG +++ +
Sbjct: 7 MKM--------AWKQLKASKLRSF------LTMLGIIIGVASVILLVSLGNGVTQEVDDQ 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + +++ + ++ + + ++ V + + +
Sbjct: 53 MGDLGSNLITVVNSSVNPNDKYTYDEVMKYQNIDGVKSVSPELSGQVNATFDYKNSSNKV 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
I +D S G D G + +G ++ + T
Sbjct: 113 IGTNDQYKAARSLEMKEGRFLLPIDTEYGQKVAV-----IGSTVASDLFGFGDPIGETIR 167
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G+ K VL + +++ + AQ + V I V K + ++
Sbjct: 168 LNGMPYKVVGVLKEKGASMMGSSDDQIFIPISSAQRLL-KDTNVRTIYVETKSAEDVDFV 226
Query: 241 HENIVRIL 248
+ L
Sbjct: 227 VNTLESRL 234
>gi|88603441|ref|YP_503619.1| hypothetical protein Mhun_2195 [Methanospirillum hungatei JF-1]
gi|88188903|gb|ABD41900.1| protein of unknown function DUF214 [Methanospirillum hungatei JF-1]
Length = 389
Score = 59.8 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/259 (13%), Positives = 76/259 (29%), Gaps = 15/259 (5%)
Query: 9 VIV-AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ + A R L R + ++ G+ + V L +++ G+ ++++K V + H
Sbjct: 3 LFIFALRNLQRRRIR------TILTMAGIALAVAVLFSLLAFQAGYEQELMKDVDSLGIH 56
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
++ K P + IP + + + + + ++ S
Sbjct: 57 MLAVPKGCPYEAA-SLIMHGGVIPKYLNESDLLLVKNTEGVSLATPMLLHQFMVNGSPH- 114
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
G+ + + + K V M K
Sbjct: 115 ----ILYGIVGSEMRSIRPYWKIEGRFFEDSEQKVMVVGKGLAEKEELKVGQMLPFGPKK 170
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ ++ ++ L EAQ F E ++ I V D + + I I
Sbjct: 171 EPFEIIGILDASGGQEDEFHFVPLDEAQRVFRKEGQLTTIAVLADDIGSSGMVADRIEEI 230
Query: 248 LGNGVVVIDWQQRYQIFFS 266
+ V+ Q +
Sbjct: 231 --PDMQVVTMTQITGTILN 247
>gi|47096188|ref|ZP_00233787.1| ABC transporter, permease protein [Listeria monocytogenes str. 1/2a
F6854]
gi|217965719|ref|YP_002351397.1| macrolide export ATP-binding/permease protein MacB [Listeria
monocytogenes HCC23]
gi|224500352|ref|ZP_03668701.1| macrolide export ATP-binding/permease protein MacB [Listeria
monocytogenes Finland 1988]
gi|254829286|ref|ZP_05233973.1| ABC transporter [Listeria monocytogenes FSL N3-165]
gi|254832485|ref|ZP_05237140.1| macrolide export ATP-binding/permease protein MacB [Listeria
monocytogenes 10403S]
gi|254901020|ref|ZP_05260944.1| macrolide export ATP-binding/permease protein MacB [Listeria
monocytogenes J0161]
gi|254913912|ref|ZP_05263924.1| ABC transporter [Listeria monocytogenes J2818]
gi|254938297|ref|ZP_05269994.1| ABC transporter [Listeria monocytogenes F6900]
gi|255025797|ref|ZP_05297783.1| macrolide export ATP-binding/permease protein MacB [Listeria
monocytogenes FSL J2-003]
gi|290892249|ref|ZP_06555244.1| ABC transporter [Listeria monocytogenes FSL J2-071]
gi|47015436|gb|EAL06370.1| ABC transporter, permease protein [Listeria monocytogenes str. 1/2a
F6854]
gi|217334989|gb|ACK40783.1| macrolide export ATP-binding/permease protein MacB [Listeria
monocytogenes HCC23]
gi|258601697|gb|EEW15022.1| ABC transporter [Listeria monocytogenes FSL N3-165]
gi|258610909|gb|EEW23517.1| ABC transporter [Listeria monocytogenes F6900]
gi|290558075|gb|EFD91594.1| ABC transporter [Listeria monocytogenes FSL J2-071]
gi|293591929|gb|EFG00264.1| ABC transporter [Listeria monocytogenes J2818]
gi|307569734|emb|CAR82913.1| ABC transporter, permease protein [Listeria monocytogenes L99]
Length = 402
Score = 59.8 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/248 (13%), Positives = 86/248 (34%), Gaps = 20/248 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + AW+ L +++ +F ++ +G++IGV ++I+++S+ NG +++ +
Sbjct: 7 MKM--------AWKQLKASKLRSF------LTMLGIIIGVASVILLVSLGNGVTQEVDDQ 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + +++ + ++ + + ++ V + + +
Sbjct: 53 MGDLGSNLITVVNSSVNPNDKYTYDEVMKYQNIDGVKSVSPELSGQVNATFDYKSSSNKV 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
I +D S G D G + +G ++ + T
Sbjct: 113 IGTNDQYKAARSLEMKEGRFLLPIDTEYGQKVAV-----IGSTVASDLFGFGDPIGETIR 167
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G+ K VL + +++ + AQ + V I V K + ++
Sbjct: 168 LNGMPYKVVGVLKEKGASMMGSSDDQIFIPISSAQRLL-KDTNVRTIYVETKSAEDVDFV 226
Query: 241 HENIVRIL 248
+ L
Sbjct: 227 VNTLESRL 234
>gi|226330512|ref|ZP_03806030.1| hypothetical protein PROPEN_04430 [Proteus penneri ATCC 35198]
gi|225201307|gb|EEG83661.1| hypothetical protein PROPEN_04430 [Proteus penneri ATCC 35198]
Length = 125
Score = 59.8 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 40/85 (47%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
+ + F S++S +G+M+GV ALI V SVMNGF + + +L ++
Sbjct: 1 MRGRAVDKFGRFVSWLSALGIMLGVAALITVTSVMNGFERSLQESILAYIPQAIVTSPNG 60
Query: 76 PLVDYQFIANRLDFIPDVIKVLPFV 100
L IA RL +I V P V
Sbjct: 61 QLPRDSNIAERLLTREGIINVTPLV 85
>gi|315187322|gb|EFU21078.1| protein of unknown function DUF214 [Spirochaeta thermophila DSM
6578]
Length = 409
Score = 59.8 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 44/271 (16%), Positives = 93/271 (34%), Gaps = 21/271 (7%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+ +R + NR+ S + G+ IG LI M + G+ + + ++ + +
Sbjct: 5 WLGYRNVLRNRRR------SILMLFGLSIGTALLIFGMGWVRGYFTTVYRNIIDFDTGHI 58
Query: 70 IQQKYYP---------LVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + + V + LS G V VR
Sbjct: 59 QVYHPTFLEEEVRTPLEYSIEDYHEWRSRLASLPGVAVTAGRIEVPARLSWRGRQVYVRL 118
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + + G+++GK+LA LG+ +GD I + V
Sbjct: 119 RGIDPPEEARLTTIEGAVVEGAFLEGVSGLLLGKELADRLGVGVGDPIAV-----RVMDR 173
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ V G+F +P D M +M L+ Q ++ + V+ + + ++ +EK
Sbjct: 174 YGVENVDVFPVQGLFSFGYPVMDRNMAFMDLESLQRLLDIGDGVTHLVIRLESSLPLEKG 233
Query: 241 HENIVRIL-GNGVVVIDWQQRYQIFFSCYES 270
+ L G W++ + + ++
Sbjct: 234 FLLVSSTLEGTPYRAYRWEEFAKALVAAVQA 264
>gi|218883804|ref|YP_002428186.1| predicted ABC transporter [Desulfurococcus kamchatkensis 1221n]
gi|218765420|gb|ACL10819.1| predicted ABC transporter [Desulfurococcus kamchatkensis 1221n]
Length = 405
Score = 59.8 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 38/259 (14%), Positives = 99/259 (38%), Gaps = 13/259 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + ++ R L + + ++ IG+ IG MAL+ + V +G+ + ++ ++
Sbjct: 1 MLVSDILKLSIRTLSEKKLR------AVLTIIGIAIGPMALMTIGGVTSGYGDFIVNSIM 54
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++++ Q + L I V+ PF S Q + + +
Sbjct: 55 GLGQNLIVVTPSRDYKLTQDDLDTLKNIEGVVDASPFYSTQGEMYIGGEKKTVFIYGVNP 114
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ L + + G ++ D G+ ++ K + G +++S G
Sbjct: 115 DFLLKALTS-LTVKEGRTPSESDLGRALVGYKIAYSDNGEPEYSVGDVVSVTVYQVKTGG 173
Query: 183 GIRSKSYTVL-----GMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
+ K +V+ + + +++ + + +++ SGI + + P+ +
Sbjct: 174 KVEVKRLSVVVSGVLDKYGGAAFLNPDQTIFVPMNTVEKMLGVKD-WSGILLLAESPNIV 232
Query: 238 EKTHENIVRILGNGVVVID 256
++ I + G + VI
Sbjct: 233 DEVSNRIRSMYGGNLDVIS 251
>gi|298675864|ref|YP_003727614.1| hypothetical protein Metev_1989 [Methanohalobium evestigatum
Z-7303]
gi|298288852|gb|ADI74818.1| protein of unknown function DUF214 [Methanohalobium evestigatum
Z-7303]
Length = 399
Score = 59.8 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/247 (13%), Positives = 77/247 (31%), Gaps = 7/247 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + S++ S ++ +G++IGV A+I +S+ F + + +
Sbjct: 2 AFKIAVGSISSSKLR------SMLTTLGIVIGVAAVIANVSLGASFSQFFEDEIGAAGDN 55
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
++ + Y + L P ++ V P + A V SS S + +
Sbjct: 56 FIVIFSNDVNLFYDNQFDLLKSTPGIVGVSPVIQKPATVEYGSSERSIEIFGTTEDYKRI 115
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
N S + + ++ + G I D +
Sbjct: 116 GNINLESGNFLSDNDKYVAVLGYEIANDKFDRDISNRNSIDITFRRNDGTERTETFRVKG 175
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ +++ + Q N E+ G + + I + +++ +
Sbjct: 176 ITEDRDPSFVGGGPNPEERIFIPMSTMQDMLNRED-YGGFALTASSLENIREISDDVDKR 234
Query: 248 LGNGVVV 254
L + V
Sbjct: 235 LARSLGV 241
>gi|299771584|ref|YP_003733610.1| Macrolide export ATP-binding/permease protein macB [Acinetobacter
sp. DR1]
gi|298701672|gb|ADI92237.1| Macrolide export ATP-binding/permease protein macB [Acinetobacter
sp. DR1]
Length = 664
Score = 59.8 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/258 (11%), Positives = 82/258 (31%), Gaps = 9/258 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + ++R F ++ +G++IG+ +++ V+++ G ++ ++ + + +
Sbjct: 271 AFQMALLSMNAHRMRTF------LTMLGIIIGIASVVTVVALGKGSQQQILSNISSLGTN 324
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + D AN +P L + VS + S + + +
Sbjct: 325 TITVFQGRGFGDNSKTANFKTLVPADADALMTQPYVSAVSPIVSTSKTMRYQQNEANATI 384
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM---GMGI 184
++ + + +D ++++ I + + +
Sbjct: 385 NGVSNDYFDVKGLVFKDGQTFDQRSVRDRSQDVVIDTNTQKQFFGDGSNPIGQVVLLGSV 444
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
++ ++ D VYM ++ V I V + D + I
Sbjct: 445 PARIIGIVEPQTSGMGSDDTLNVYMPYTTVMSRMLGQSNVRNIVVRINDKYSTAAAENAI 504
Query: 245 VRILGNGVVVIDWQQRYQ 262
V +L D
Sbjct: 505 VNLLTQRHGAQDIFTMNS 522
>gi|307315657|ref|ZP_07595189.1| ABC transporter related protein [Sinorhizobium meliloti BL225C]
gi|306898682|gb|EFN29346.1| ABC transporter related protein [Sinorhizobium meliloti BL225C]
Length = 647
Score = 59.4 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/248 (12%), Positives = 78/248 (31%), Gaps = 10/248 (4%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A R L +N + ++ +G++IGV +++ ++++ G + ++ R+ + ++
Sbjct: 258 KMALRALRAN------LFRTILTLLGIVIGVGSVVAMLAIGTGAQNSVLDRISSMGSDLL 311
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ + + +P + ++ AF + + I +
Sbjct: 312 VVRPSMANFRGSAGGTNVTLVPADADAITELANVAFAVPEMTSTVTLRRGNIDYQTTANG 371
Query: 130 QNSFS----RFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ +R + P G +
Sbjct: 372 TVPQFTEAKSWKIGRGEFINRNDMETYAPVAVLGETVVKTLFPEGSDPIGQYVLVNKIPF 431
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ GM + + +V + L + + + I V V+D AI+ T E I
Sbjct: 432 QVIGVMSGMGASAGGNDQDDVVLVPLTTGSMRLFGQRNIRTITVKVQDASAIDLTQERIQ 491
Query: 246 RILGNGVV 253
+L
Sbjct: 492 ALLNERHR 499
>gi|15965824|ref|NP_386177.1| transmembrane ATP-binding ABC transporter protein [Sinorhizobium
meliloti 1021]
gi|307318892|ref|ZP_07598324.1| ABC transporter related protein [Sinorhizobium meliloti AK83]
gi|81854272|sp|Q92NU9|MACB_RHIME RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|15075093|emb|CAC46650.1| Probable macrolide export ATP-binding/permease protein MacB
[Sinorhizobium meliloti 1021]
gi|306895613|gb|EFN26367.1| ABC transporter related protein [Sinorhizobium meliloti AK83]
Length = 647
Score = 59.4 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/248 (12%), Positives = 78/248 (31%), Gaps = 10/248 (4%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A R L +N + ++ +G++IGV +++ ++++ G + ++ R+ + ++
Sbjct: 258 KMALRALRAN------LFRTILTLLGIVIGVGSVVAMLAIGTGAQNSVLDRISSMGSDLL 311
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ + + +P + ++ AF + + I +
Sbjct: 312 VVRPSMANFRGSAGGTNVTLVPADADAITELANVAFAVPEMTSTVTLRRGNIDYQTTANG 371
Query: 130 QNSFS----RFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ +R + P G +
Sbjct: 372 TVPQFTEAKSWKIGRGEFINRNDMETYAPVAVLGETVVKTLFPEGSDPIGQYVLVNKIPF 431
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ GM + + +V + L + + + I V V+D AI+ T E I
Sbjct: 432 QVIGVMSGMGASAGGNDQDDVVLVPLTTGSMRLFGQRNIRTITVKVQDASAIDLTQERIQ 491
Query: 246 RILGNGVV 253
+L
Sbjct: 492 ALLNERHR 499
>gi|305663065|ref|YP_003859353.1| protein of unknown function DUF214 [Ignisphaera aggregans DSM
17230]
gi|304377634|gb|ADM27473.1| protein of unknown function DUF214 [Ignisphaera aggregans DSM
17230]
Length = 414
Score = 59.4 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/243 (12%), Positives = 75/243 (30%), Gaps = 9/243 (3%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL-GINGHV 68
+++ R L + +++ S + IGV ++ ++S+ +G +++ + +
Sbjct: 1 MLSLRNLGRRKIRTILTVVS------IAIGVAMIVSLLSITSGMEVNLMNAIRAMGGADI 54
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ ++ + + F + + + S +L IS +
Sbjct: 55 TLYNASIGFQGFREGSRPMGFATGDRLLSESIVSEIQGIPGVYIVSPLLSISISIGNIPR 114
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK-INILSPYGDVTPMGMGIRSK 187
+ ++ + + I I S
Sbjct: 115 VVIYGVDISSYLNVSNLNIVNGSFIARQGECVIGKALSEAIGIGIGDTLNITYQQTGNSI 174
Query: 188 SYTVLGMFRMRFPDYDNG-MVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
V+G+F +N +YM +++ Q NL VS I + +P + I
Sbjct: 175 ECNVVGIFETGVEFQENAIYIYMDIRDVQRIANLTGYVSQILIKCVNPLDANSIAQQIQD 234
Query: 247 ILG 249
+
Sbjct: 235 MYP 237
>gi|325972587|ref|YP_004248778.1| hypothetical protein SpiBuddy_2775 [Spirochaeta sp. Buddy]
gi|324027825|gb|ADY14584.1| protein of unknown function DUF214 [Spirochaeta sp. Buddy]
Length = 418
Score = 59.4 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/279 (11%), Positives = 85/279 (30%), Gaps = 19/279 (6%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+F + +A + L ++ I+ + + G+M + V S++ G + ++ +
Sbjct: 1 MKFILQLAAKNLMRYKRRTAITAVA------IAFGLMMYVFVDSLLLGAELESMRNLRWY 54
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIK----------VLPFVSGQAFVSGLSSGGS 114
+ D F A +
Sbjct: 55 ETASLRVHDSAYWEDRYFFPLEASIEKSKEILDVFKAEGIAATERTLFAADMILYQDDFG 114
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ + + + + + + K + +
Sbjct: 115 EDGNMSVQVTAINAETDFEVYRFEDTLVEGRFLKSGEMDGIVLGRWFAEDIGAKVGYWVT 174
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G + V+G+ P+ + +V M ++ A LY +E +VS I++ + +
Sbjct: 175 LVTRGKGGFYEAFDMQVVGIVNCPNPNVNRTLVMMDIEAADLYLGMEGSVSSIDIMLGEK 234
Query: 235 DAIEKTHENIVRILG---NGVVVIDWQQRYQIFFSCYES 270
+++ + + L + +V+ WQ + + + E+
Sbjct: 235 SDLQQIAQRLQTKLNAIESDLVIYTWQDLARDYLAILEA 273
>gi|313635205|gb|EFS01511.1| macrolide export ATP-binding/permease protein MacB [Listeria
seeligeri FSL N1-067]
gi|313639847|gb|EFS04563.1| macrolide export ATP-binding/permease protein MacB [Listeria
seeligeri FSL S4-171]
Length = 402
Score = 59.4 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/248 (13%), Positives = 87/248 (35%), Gaps = 20/248 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + AW+ L +++ +F ++ +G++IGV ++I+++S+ NG E++ ++
Sbjct: 7 MKM--------AWKQLKASKLRSF------LTMLGIIIGVASVILLVSLGNGVTEEVDEQ 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + +++ + ++ + + ++ V + + +
Sbjct: 53 MGDLGSNLITVVNSSVNPNDKYTYDEVMKYQNIDGVKSVSPELSGQVNATFDYKNSSNKV 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
I +D S G D G + +G ++ + T
Sbjct: 113 IGTNDQYKAARSLEMSEGRFLLPIDTEYGQKVAV-----IGSTVASDLFGFGNPIGETIR 167
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G+ K VL + +++ + AQ + V I V K + ++
Sbjct: 168 LNGMPYKVVGVLKEKGASMMGSSDDQIFIPISSAQRLL-KDTNVRTIYVETKSAEDVDFV 226
Query: 241 HENIVRIL 248
+ L
Sbjct: 227 VNTLESRL 234
>gi|15639570|ref|NP_219020.1| hypothetical protein TP0582 [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189025809|ref|YP_001933581.1| hypothetical protein TPASS_0582 [Treponema pallidum subsp. pallidum
SS14]
gi|3322875|gb|AAC65556.1| conserved hypothetical integral membrane protein [Treponema
pallidum subsp. pallidum str. Nichols]
gi|189018384|gb|ACD71002.1| hypothetical integral membrane protein [Treponema pallidum subsp.
pallidum SS14]
Length = 495
Score = 59.4 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 38/267 (14%), Positives = 85/267 (31%), Gaps = 20/267 (7%)
Query: 18 SNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPL 77
+ ++ +F+ + F + +G+ I ++ LIVV+ V +G E + R++ + + PL
Sbjct: 55 AGKRRSFLRKSFFCAALGIGISIIPLIVVLVVSDGMIEGITTRMIELGSGHLQFIDILPL 114
Query: 78 VDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN----SDFSYLQNSF 133
+ R + + + G + + + F
Sbjct: 115 APNETATQRYEDAQRIFNAFMAQDFGPYCHSRWMHLQGDGIVIGKTGRAGGNIRAVPPDF 174
Query: 134 SRFYGNVSND------------FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ +I+GK +A +G+ GD IL+ T
Sbjct: 175 FSSERGLRPFLTVEGSLELVDRPQGVHTLILGKRIAERIGVRCGDTCQILTLVQGGTGRA 234
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ ++ + + + D V++ L + +A+ V D +
Sbjct: 235 VPKMVRAVVGGIV-SCGYQELDALWVFIPLTLGMKILSPASALLSFVVKTADAFDAKAMT 293
Query: 242 ENIVR---ILGNGVVVIDWQQRYQIFF 265
I + L + WQ + F
Sbjct: 294 RFIEQVHEQLPSHFSAYTWQDMNRSQF 320
>gi|116871584|ref|YP_848365.1| ABC transporter, permease protein [Listeria welshimeri serovar 6b
str. SLCC5334]
gi|116740462|emb|CAK19582.1| ABC transporter, permease protein [Listeria welshimeri serovar 6b
str. SLCC5334]
Length = 403
Score = 59.4 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 33/248 (13%), Positives = 87/248 (35%), Gaps = 20/248 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + AW+ L +++ +F ++ +G++IGV ++I+++S+ NG +++ ++
Sbjct: 7 MKM--------AWKQLKASKLRSF------LTMLGIIIGVASVILLVSLGNGVTKEVDEQ 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + +++ + ++ + + ++ V + + +
Sbjct: 53 MGDLGSNLITVVNSSVNPNDKYTYDEVMKYQNIDGVKSVSPELSGQVNATFDYKNSSNKV 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
I +D S G D G + +G ++ + T
Sbjct: 113 IGTNDQYKAARSLEMKDGRFLLPIDTEYGQKVAV-----IGSTVASDLFGFGNPIGETIR 167
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G+ K VL + +++ + AQ + V I V K + ++
Sbjct: 168 LNGMPYKVVGVLKEKGASMMGSSDDQIFIPISSAQRLL-KDTNVRTIYVETKSAEDVDFV 226
Query: 241 HENIVRIL 248
+ L
Sbjct: 227 VNTLESRL 234
>gi|57167894|ref|ZP_00367034.1| probable integral membrane protein Cj0941c [Campylobacter coli
RM2228]
gi|57021016|gb|EAL57680.1| probable integral membrane protein Cj0941c [Campylobacter coli
RM2228]
Length = 354
Score = 59.4 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 38/222 (17%), Positives = 86/222 (38%), Gaps = 10/222 (4%)
Query: 50 MNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGL 109
MNGF ++ KR +N + + + + L + P++S Q
Sbjct: 1 MNGFDKEFEKRFFVMN-YPITIVPKFYSPMDDDLVTELKREFPHLLFSPYISTQVVAK-A 58
Query: 110 SSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN 169
+ G ++ G++ +D + ++ + + +++G LA L + DK++
Sbjct: 59 DNRFEGGVLFGVNFNDEVKINEVVAKALKDENLSGFD---ILVGSVLADELNLHKNDKLS 115
Query: 170 ILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA--VSGI 227
++ + + ++K + V F YD +Y + + + N G+
Sbjct: 116 LIFSNLSPSGFSLVPQAKRFDVKARFTSGLIFYDKAYMYTDVNALRKVLGISNQQSYDGV 175
Query: 228 EVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
V+ ++ K E + L + V+ W ++ Q FFS +
Sbjct: 176 HVYSENAF---KDVEKLKSYLKSDYAVVGWWEQNQNFFSALK 214
>gi|255320938|ref|ZP_05362112.1| macrolide export ATP-binding/permease protein MacB [Acinetobacter
radioresistens SK82]
gi|262380209|ref|ZP_06073364.1| peptide ABC transporter permease [Acinetobacter radioresistens
SH164]
gi|255302107|gb|EET81350.1| macrolide export ATP-binding/permease protein MacB [Acinetobacter
radioresistens SK82]
gi|262298403|gb|EEY86317.1| peptide ABC transporter permease [Acinetobacter radioresistens
SH164]
Length = 662
Score = 59.0 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/257 (13%), Positives = 78/257 (30%), Gaps = 8/257 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + ++R F ++ +G++IG+ +++ V+++ NG ++ +++ + + +
Sbjct: 270 AFRMALLAMNAHRMRTF------LTMLGIIIGIASVVSVVALGNGSQKQILENISSLGTN 323
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + D + IP L VS + + S
Sbjct: 324 TITIYQGRGFGDNSRSSQVRTLIPADADALADQPYVQGVSPTVNNSVTGRFKDTEASITV 383
Query: 128 Y-LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILS-PYGDVTPMGMGIR 185
+ + F G I + + S K + +G
Sbjct: 384 NGVSDQFFDVRGLNFTAGQAFDKFAINERSQDVVIDSNTQKTLFADGSDPIGQVILLGSV 443
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ D+ VY+ ++ V I V VKD + I+
Sbjct: 444 PSRVIGVVEANAGMFGSDSLNVYLPYSTVMSRMLGQSNVRSIIVRVKDEYSSSAAENAIL 503
Query: 246 RILGNGVVVIDWQQRYQ 262
+L D +
Sbjct: 504 SLLEQRHGAQDVYSQNS 520
>gi|289433543|ref|YP_003463415.1| ABC transporter, permease protein [Listeria seeligeri serovar 1/2b
str. SLCC3954]
gi|289169787|emb|CBH26323.1| ABC transporter, permease protein [Listeria seeligeri serovar 1/2b
str. SLCC3954]
Length = 402
Score = 59.0 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/248 (13%), Positives = 87/248 (35%), Gaps = 20/248 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + AW+ L +++ +F ++ +G++IGV ++I+++S+ NG E++ ++
Sbjct: 7 MKM--------AWKQLKASKLRSF------LTMLGIIIGVASVILLVSLGNGVTEEVDEQ 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + +++ + ++ + + ++ V + + +
Sbjct: 53 MGDLGSNLITVVNSSVNPNDKYTYDEVMKYQNIDGVKSVSPELSGQVNATFDYKNSSNKV 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
I +D S G D G + +G ++ + T
Sbjct: 113 IGTNDQYKAARSLEMSEGRFLLPIDTEYGQKVAV-----IGSTVASDLFGFGNPIGETIR 167
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G+ K VL + +++ + AQ + V I V K + ++
Sbjct: 168 LNGMPYKVVGVLKEKGASMMGSSDDQIFIPISSAQRLL-KDTNVRTIYVETKSAEDVDFV 226
Query: 241 HENIVRIL 248
+ L
Sbjct: 227 VNTLESRL 234
>gi|149188629|ref|ZP_01866921.1| hypothetical protein VSAK1_16122 [Vibrio shilonii AK1]
gi|148837539|gb|EDL54484.1| hypothetical protein VSAK1_16122 [Vibrio shilonii AK1]
Length = 411
Score = 59.0 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 41/276 (14%), Positives = 89/276 (32%), Gaps = 26/276 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +AWR L+ N+ + I ++ G++ ++ +M MNG ++M+ +
Sbjct: 3 IKLAWRNLWRNKIR------TGIMAGAMVFGLVGVVAMMGFMNGMTDNMVHNAIAWQTSH 56
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI------- 121
+ + + + + +VS G R
Sbjct: 57 LQIHNQRFDENPDIKDTVIGDKQIEAALEANSNINQWVSRFVVDGMMASARSTRGVTVLG 116
Query: 122 -SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+++ R D +++ A+ L + +G K+ I +
Sbjct: 117 IDSANELDFTPIAERLVDGEWLDEKGRNPILVSAKNAQRLKLRVGSKVVITFTDPEGEVT 176
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFV------KDP 234
G R + F+ YD+G V + + Q L N V V V
Sbjct: 177 GAAFRVRGI-----FKTPSSAYDDGHVLVRKSDIQSLAKL-NGVHEYAVQVTAKANANSE 230
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ + ++ ++ +G VV W Q + + +
Sbjct: 231 EQVRHVVSDLQSLIPSGNVVQGWYQLQPLLATMINT 266
>gi|291059959|gb|ADD72694.1| lipoprotein releasing system, permease protein, putative [Treponema
pallidum subsp. pallidum str. Chicago]
Length = 488
Score = 59.0 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 38/267 (14%), Positives = 85/267 (31%), Gaps = 20/267 (7%)
Query: 18 SNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPL 77
+ ++ +F+ + F + +G+ I ++ LIVV+ V +G E + R++ + + PL
Sbjct: 48 AGKRRSFLRKSFFCAALGIGISIIPLIVVLVVSDGMIEGITTRMIELGSGHLQFIDILPL 107
Query: 78 VDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN----SDFSYLQNSF 133
+ R + + + G + + + F
Sbjct: 108 APNETATQRYEDAQRIFNAFMAQDFGPYCHSRWMHLQGDGIVIGKTGRAGGNIRAVPPDF 167
Query: 134 SRFYGNVSND------------FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ +I+GK +A +G+ GD IL+ T
Sbjct: 168 FSSERGLRPFLTVEGSLELVDRPQGVHTLILGKRIAERIGVRCGDTCQILTLVQGGTGRA 227
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ ++ + + + D V++ L + +A+ V D +
Sbjct: 228 VPKMVRAVVGGIV-SCGYQELDALWVFIPLTLGMKILSPASALLSFVVKTADAFDAKAMT 286
Query: 242 ENIVR---ILGNGVVVIDWQQRYQIFF 265
I + L + WQ + F
Sbjct: 287 RFIEQVHEQLPSHFSAYTWQDMNRSQF 313
>gi|149372882|ref|ZP_01891879.1| putative transmembrane permease [unidentified eubacterium SCB49]
gi|149354375|gb|EDM42941.1| putative transmembrane permease [unidentified eubacterium SCB49]
Length = 411
Score = 59.0 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/269 (11%), Positives = 87/269 (32%), Gaps = 6/269 (2%)
Query: 5 SRFEVIVAWRYLFSNR-KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FE +A R + + K++ + I+ + +G++ ++V ++ G + + +++
Sbjct: 1 MNFEFFIARRIIAAKDYKSSISAPIIKIAITAIALGIIMMLVTIATSLGLQRKIQEKISA 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAF---VSGLSSGGSGVLVRG 120
NG ++I + + G
Sbjct: 61 FNGDIIISNQDTNFSGESQTPISIHQDFYPTFTTIDGVKHIQATASKGGVIRTETDFEGV 120
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + + + Y D + L+ L + K+ P +
Sbjct: 121 LIKGVGADYNWQYFKEYLVEGRLPDFTGNLNDEVILSTYLANRLRLKVGDRMPTYFLNQT 180
Query: 181 GMGIRS-KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIE 238
+ + ++G++ F +D + +++ Q+ + + + EVFV+D +
Sbjct: 181 NSQKPRSRGFMIVGLYNSGFQQFDEQFAFADIRQIQMLNKWDSDQIGNFEVFVEDFREVT 240
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSC 267
+ I + + + + ++ F
Sbjct: 241 HINNLIYDDTPSTLDTLSIRDKFASIFEW 269
>gi|325287105|ref|YP_004262895.1| hypothetical protein Celly_2203 [Cellulophaga lytica DSM 7489]
gi|324322559|gb|ADY30024.1| protein of unknown function DUF214 [Cellulophaga lytica DSM 7489]
Length = 413
Score = 59.0 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/271 (11%), Positives = 88/271 (32%), Gaps = 7/271 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVM-IGVMALIVVMSVMNGFREDMIKRVLG 63
E + R + + IS I + + V+ ++ ++ +G +E + ++V
Sbjct: 1 MNLEFFITKRLIKGKENKSSISAPIIKIAIVAIALSVIMMLFAIATGDGLKEKVREKVAA 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIK-----VLPFVSGQAFVSGLSSGGSGVLV 118
NGH+ I D + ++ + + + + + +
Sbjct: 61 FNGHIQIFNYDNNTSDVSVVPVSINQEFYPEFKNIDGITHVQAIANKGGIIITDDTFEGI 120
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
+++ + + + + +
Sbjct: 121 IAKGVGKDYNWDVFKEYVVAGRLPNYNDKLNEEVLVSSLIANKLQLKVGDTFSTFFLKDN 180
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLENAVSGIEVFVKDPDAI 237
+++T++G++ F ++D V++ ++ Q ++ V EVF+ DAI
Sbjct: 181 NPSQTPNRRNFTIVGLYDSGFEEFDGTYVFVDIRHIQRINKWSKDQVGSFEVFLNSFDAI 240
Query: 238 EKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
++ + I + + + + +Y+ F
Sbjct: 241 DQKSKEIYGTTVSTLDSSNIKDKYRSIFEWI 271
>gi|255018167|ref|ZP_05290293.1| macrolide export ATP-binding/permease protein MacB [Listeria
monocytogenes FSL F2-515]
Length = 277
Score = 59.0 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 33/248 (13%), Positives = 86/248 (34%), Gaps = 20/248 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + AW+ L +++ +F ++ +G++IGV ++I+++S+ NG +++ +
Sbjct: 7 MKM--------AWKQLKASKLRSF------LTMLGIIIGVASVILLVSLGNGVTQEVDDQ 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + +++ + ++ + + ++ V + + +
Sbjct: 53 MGDLGSNLITVVNSSVNPNDKYTYDEVMKYQNIDGVKSVSPELSGQVNATFDYKSSSNKV 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
I +D S G D G + +G ++ + T
Sbjct: 113 IGTNDQYKAARSLEMKEGRFLLPIDTEYGQKVAV-----IGSTVASDLFGFGDPIGETIR 167
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G+ K VL + +++ + AQ + V I V K + ++
Sbjct: 168 LNGMPYKVVGVLKEKGASMMGSSDDQIFIPISSAQRLL-KDTNVRTIYVETKSAEDVDFV 226
Query: 241 HENIVRIL 248
+ L
Sbjct: 227 VNTLESRL 234
>gi|226330511|ref|ZP_03806029.1| hypothetical protein PROPEN_04429 [Proteus penneri ATCC 35198]
gi|225201306|gb|EEG83660.1| hypothetical protein PROPEN_04429 [Proteus penneri ATCC 35198]
Length = 264
Score = 59.0 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 49/129 (37%), Gaps = 4/129 (3%)
Query: 142 NDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPD 201
GVI+G LA+ L + GD I ++ P + S+ + D
Sbjct: 1 MLKAGDYGVILGSGLAKQLKVKEGDNIRLIVPSVSQLTPMGRLPSQRLFTVKGIFQSGGD 60
Query: 202 YDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQR 260
D + ++ Q+A ++G +F DP IEK + L + DW++R
Sbjct: 61 ADASQILVNQQDAARLMRYQPGNITGWRLFFTDPLNIEKYS---AQSLDKNLSWRDWRER 117
Query: 261 YQIFFSCYE 269
FF +
Sbjct: 118 KGEFFQAVK 126
>gi|95930992|ref|ZP_01313721.1| protein of unknown function DUF214 [Desulfuromonas acetoxidans DSM
684]
gi|95133001|gb|EAT14671.1| protein of unknown function DUF214 [Desulfuromonas acetoxidans DSM
684]
Length = 407
Score = 59.0 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 35/255 (13%), Positives = 71/255 (27%), Gaps = 15/255 (5%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A+ L NR+ ++++S + I LI+ + + +G + +
Sbjct: 3 IKLAFLNLGRNRRRTLLTLSSLV------ISAAMLILSLGIFSGM---FADMLSSATDNY 53
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
Q L+F P + + + L+ G S +
Sbjct: 54 TGHITISRPDYQQEHDLYLNFSPAPALLDKLQHTRGITGLSERLRAFGLLSGRDQSRPAE 113
Query: 129 LQNSFSRFYGNVSNDFD------RGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
L V+ G+ + +
Sbjct: 114 LLGVDFAQEPQVTTLNQKLIAGTFPTNSAAGQGVIGSALARRLGVTVGDELVLVSQAADG 173
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
I + TV G+F + + + L Q L V I + + P
Sbjct: 174 SIANALLTVSGIFDSGDQMLNTRLALVDLHWLQNTMALPGKVHEIVLRCQQPLRAATLAA 233
Query: 243 NIVRILGNGVVVIDW 257
+ + LG+ V+DW
Sbjct: 234 TLQQQLGDTEEVLDW 248
>gi|124007679|ref|ZP_01692382.1| ABC transporter, permease protein [Microscilla marina ATCC 23134]
gi|123986801|gb|EAY26573.1| ABC transporter, permease protein [Microscilla marina ATCC 23134]
Length = 421
Score = 59.0 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 43/262 (16%), Positives = 87/262 (33%), Gaps = 5/262 (1%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
V+ R L + AF I + I+ + IG+ LIV V+ GFR + ++ GH+
Sbjct: 22 FVSAR-LAQGKDKAFSGIITRIAIASISIGLAILIVAFGVLEGFRNTIHDKIFSFVGHIQ 80
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSG--QAFVSGLSSGGSGVLVRGISNSDFS 127
+ Q + N + K AF + V G+
Sbjct: 81 VTQFNSGNSYKEKPINTNTRLFKNYKNNLPNVETLHAFSMKPGIFKTSDEVMGVLLKGIG 140
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
V F + K+L + I+ + + V + +
Sbjct: 141 ADYRQSKFTKNMVKGRFLKFPKGKASKELIISQKIAHKLHLKVNDSIY-VYFVQDPPAIR 199
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTHENIVR 246
++G++ ++D V ++ Q + V G EVF+ D ++ + +
Sbjct: 200 KLHIVGIYESGMEEFDEKFVLSDIRLIQKLNRWADTLVGGYEVFINDFRRLDSVQKEVFE 259
Query: 247 ILGNGVVVIDWQQRYQIFFSCY 268
+ + + ++Y+ F
Sbjct: 260 EMEYDMQMQTTPRKYEEIFDWL 281
>gi|114562987|ref|YP_750500.1| hypothetical protein Sfri_1812 [Shewanella frigidimarina NCIMB 400]
gi|114334280|gb|ABI71662.1| protein of unknown function DUF214 [Shewanella frigidimarina NCIMB
400]
Length = 401
Score = 58.6 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 34/244 (13%), Positives = 89/244 (36%), Gaps = 9/244 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+++A R + N +F ++ +G++IGV A+I+++++ G + + +++ + +
Sbjct: 5 ALLLAMREIRRNVMRSF------LTVLGIVIGVAAVIIMVTIGGGATQQVTQQISSLGSN 58
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+++ + Q + + D + +S + V+ +S V+ + S
Sbjct: 59 LLMVSPGQRMGMGQRSSASAFRLDDAEAISREISNISAVAPSASQSVTVVFGNENWSTSI 118
Query: 128 YLQNSFSRFYGNVSND---FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ GN + GK + + +P G +
Sbjct: 119 SGSTNQLFEAGNWEFKSGRQFVESELRAGKAVCIIGETVRKELFGEQNPIGQKIRLEKLS 178
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + + +V + L+ Q V I++ VKD + +K + +
Sbjct: 179 CEVIGLLNSKGQSTMGMDQDDLVVIPLRTFQRRLAGNQDVRLIQISVKDGVSTQKVEQAV 238
Query: 245 VRIL 248
+L
Sbjct: 239 TELL 242
>gi|119356426|ref|YP_911070.1| hypothetical protein Cpha266_0590 [Chlorobium phaeobacteroides DSM
266]
gi|119353775|gb|ABL64646.1| protein of unknown function DUF214 [Chlorobium phaeobacteroides DSM
266]
Length = 424
Score = 58.6 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 45/285 (15%), Positives = 100/285 (35%), Gaps = 32/285 (11%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++F + +A+ +L ++ + ++ +GV +G L+ +SV G ++I +
Sbjct: 1 MTLFDQI--RIAYVHLKERKRQ------TMLTALGVAVGSAMLVTTISVARGSSSNVITK 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIA-NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
V+ HV++ + + + + V + + + + + ++
Sbjct: 53 VIDTAPHVLVSADRIEPLVPENLIGYSSSRVAMVTRNVTSNDKEVIKNYTEVVENIRKIK 112
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKD---LARNLGISIGDKINILSP--- 173
G+ + L +R ++ RG + D L +NL + +P
Sbjct: 113 GLESISPFVLSKVLARNKSRFTSCIARGVSPPLEADIAGLKKNLIEKNALEELAYTPDGI 172
Query: 174 --------------YGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFN 219
+ + + S T++G F F D Y++L AQ
Sbjct: 173 LVGYLLAEKLDAGYHDRIVLVTKNSESYPVTIVGSFSSGFNAKDEREAYVNLALAQRMEG 232
Query: 220 L-ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQI 263
+ N+VSGI + D + + I G W + +
Sbjct: 233 IAANSVSGIGLRTSDVNRASGVAAQVADI--TGYKSESWDETNRN 275
>gi|262280959|ref|ZP_06058742.1| macrolide transporter [Acinetobacter calcoaceticus RUH2202]
gi|262257859|gb|EEY76594.1| macrolide transporter [Acinetobacter calcoaceticus RUH2202]
Length = 664
Score = 58.6 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/258 (11%), Positives = 82/258 (31%), Gaps = 9/258 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + ++R F ++ +G++IG+ +++ V+++ G ++ ++ + + +
Sbjct: 271 AFQMALLSMNAHRMRTF------LTMLGIIIGIASVVTVVALGKGSQQQILSNISSLGTN 324
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + D A+ +P L + VS + S + + +
Sbjct: 325 TITVFQGRGFGDNSKTASFKTLVPADADALITQPYVSAVSPIVSTSKTMRYQQNEANATI 384
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM---GMGI 184
++ + + +D ++++ I + + +
Sbjct: 385 NGVSNDYFDVKGLVFKDGQTFDQRSVRDRSQDVVIDTNTQKQFFGDGSNPIGQVVLLGSV 444
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
++ V+ D VYM ++ V I V + D + I
Sbjct: 445 PARIIGVVEPQTSGMGSDDTLNVYMPYTTVMSRMLGQSNVRNIVVRINDKYSTTAAENAI 504
Query: 245 VRILGNGVVVIDWQQRYQ 262
V +L D
Sbjct: 505 VNLLTQRHGAQDIFTMNS 522
>gi|332040711|gb|EGI77083.1| transmembrane ATP-binding ABC transporter protein [Hylemonella
gracilis ATCC 19624]
Length = 665
Score = 58.6 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 41/256 (16%), Positives = 95/256 (37%), Gaps = 15/256 (5%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A R L SN + ++ +G++IGV ++I ++++ +G ++ +I+R+ + ++++
Sbjct: 279 AVRALRSN------VFRAVLTLLGIVIGVASVIAMLAIGDGAKQVVIERISAMGSNLLLV 332
Query: 72 QKYYPLVDYQFIANRLD------FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+ P L +V VL V Q + L + + S
Sbjct: 333 RPGAPNSRGFSNVATLVLADVQAINREVPNVLAAVPEQNSNATLRYRDADYSSSVLGTSW 392
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ G+ + D+ + ++ P G+ + +
Sbjct: 393 QYPQVRQWLPSSGSFFTEEDQQNYATVAV---LGQTVARALFPGGQDPVGEFILVNNLVF 449
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ F + +V + + +QL + + + + V V+D I++T +
Sbjct: 450 QVVGVMSARGASPFGQDQDDVVLVPYETSQLRLSGQRFLRNVTVAVQDVSRIDETQAAVE 509
Query: 246 RILGNGVVVIDWQQRY 261
+L VID+Q R
Sbjct: 510 ALLAQRHGVIDFQLRN 525
>gi|299820673|ref|ZP_07052562.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Listeria grayi DSM 20601]
gi|299817694|gb|EFI84929.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Listeria grayi DSM 20601]
Length = 403
Score = 58.2 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/248 (14%), Positives = 85/248 (34%), Gaps = 14/248 (5%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M+I +A++ L +++ +F ++ +G++IGV ++I+++S+ NG + + ++
Sbjct: 1 MNILQ--STKMAFKQLRTSKLRSF------LTMLGIIIGVASVILLVSLGNGVTQKVNEQ 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + ++V + +F + V + + V +
Sbjct: 53 MGDLGSNLVTVMNNSTNPNDKFTYAEAMKYKGIDGVKSVSPELSGQVHATYDYKSVNDKV 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
I ++ S G D G + ++ + S T
Sbjct: 113 IGTNEQYKNARSLKLDKGRFLLPIDIEYGQKVAVIGP-----NVASDLFGFSDPIGETIR 167
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G+ K +L + +Y+ AQ + V + V KD D ++
Sbjct: 168 LNGMPYKVVGMLKEKGDSLMGSSDDQIYIPFSAAQRML-KDTNVRTLYVETKDADDVDFV 226
Query: 241 HENIVRIL 248
+ L
Sbjct: 227 VNTLKSRL 234
>gi|219685393|ref|ZP_03540212.1| lipoprotein releasing factor [Borrelia garinii Far04]
gi|219673166|gb|EED30186.1| lipoprotein releasing factor [Borrelia garinii Far04]
Length = 417
Score = 58.2 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/260 (14%), Positives = 94/260 (36%), Gaps = 8/260 (3%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+ R + + + ++I +S + +G + +I+ +S+MNGF+ D +V
Sbjct: 6 FLLKRLILEEKNSLALTIVIILS---IALGEIIIILTISIMNGFQNDF----FLSTTNVE 58
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
Q ++ I + + Q + + + + D
Sbjct: 59 SGNLKIENELTQEEIKKIKKIEGIKHINKIYETQGIGIQDYYYPTILNIIAVDIKDLKKD 118
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
QN + + +IIG L+ N + D + ++ + + K++
Sbjct: 119 QNFITFTGLEKDELDLKDDEIIIGNVLSYNFNLFKNDTLRLIITDEIKNFISLENDIKNF 178
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
+ +F+ + + +++M++ L N+ +V K+ + K E I + +
Sbjct: 179 KIKSIFKSNYAKINETLIFMNIDYFIKNNLLHNSSINYQVKTKNLNPSNKLIEKI-KAIN 237
Query: 250 NGVVVIDWQQRYQIFFSCYE 269
+ V W + + F+ +
Sbjct: 238 PKIKVKTWNEYNKEFYKALK 257
>gi|153832946|ref|ZP_01985613.1| transporter [Vibrio harveyi HY01]
gi|148870869|gb|EDL69768.1| transporter [Vibrio harveyi HY01]
Length = 409
Score = 58.2 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/258 (11%), Positives = 74/258 (28%), Gaps = 18/258 (6%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMS-VMNGFREDMIKRVLGINGHV 68
+AWR L+ ++ ++ ++ AL++ +S + F+E +
Sbjct: 4 KLAWRNLWRQKRRTLLTASAL-----------ALVLFLSLITRAFQEGSYTSNIKNAAKF 52
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
++ ++ D +P + + + +
Sbjct: 53 YTGLIQLQNPEFGDSSSIDDVLPQTNTFISAAKNNPNIDVVLPRVESFALAAKDERSKGV 112
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKD------LARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++ L +
Sbjct: 113 MVLGVEPEAEDRYSNISDKLIEGSYIQSGQKSVLVGGGLANYLQLKVGDKLVLYGVGYRG 172
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ Y + G+ D+ +VYM L AQ ++L++ V+ + + + T E
Sbjct: 173 QTAAGLYQISGILHFPLQQLDSQLVYMPLDTAQSLYSLDDQVTAWVLNTESLRDLPDTVE 232
Query: 243 NIVRILGNGVVVIDWQQR 260
+ G V V DW++
Sbjct: 233 QLKAEYGKNVAVKDWKEL 250
>gi|315224151|ref|ZP_07865991.1| probable transmembrane permease [Capnocytophaga ochracea F0287]
gi|314945884|gb|EFS97893.1| probable transmembrane permease [Capnocytophaga ochracea F0287]
Length = 385
Score = 58.2 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/247 (12%), Positives = 97/247 (39%), Gaps = 12/247 (4%)
Query: 31 ISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVD--------YQF 82
++ + +G++ +++ ++ G + + ++++ +GH+ I Q
Sbjct: 1 MAIAAIAVGMVMMLIAIATGIGLQRKIREKLVVFHGHIQIFDYSNNTSQVTTKPIAIKQD 60
Query: 83 IANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSN 142
+P+V + + + ++ S + + ++S +++ +
Sbjct: 61 FYPTFSAVPEVTHIQAVATKGGIIRTETTYESILAKGVGKDYNWSLIRDFITEGRTPNVA 120
Query: 143 DFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDY 202
+ V++ LA L + +GD+ + + +S+ ++G++ F ++
Sbjct: 121 SEEVTDEVLMSTYLANRLHLKLGDRCQAIFLKDEA---AQAPNQRSFKIVGLYNSGFQEF 177
Query: 203 DNGMVYMSLQEAQLYF-NLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRY 261
D V+ ++ Q + + E+F+KD D IE+ + + +G+ + Q++
Sbjct: 178 DASYVFTDIRHIQKINKWQPDQIGNFELFIKDFDRIEEVGKQVYGKVGSFLDSQTIIQKF 237
Query: 262 QIFFSCY 268
F
Sbjct: 238 PFIFEWL 244
>gi|227822523|ref|YP_002826495.1| macrolide export ATP-binding/permease protein MacB [Sinorhizobium
fredii NGR234]
gi|227341524|gb|ACP25742.1| macrolide export ATP-binding/permease protein MacB [Sinorhizobium
fredii NGR234]
Length = 647
Score = 58.2 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/251 (12%), Positives = 80/251 (31%), Gaps = 10/251 (3%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A R L +N + ++ +G++IGV +++ ++++ G ++ ++ R+ + ++
Sbjct: 258 KMAMRALRAN------LFRTILTLLGIIIGVGSVVAMLAIGTGAQDSVLSRISSMGSDLL 311
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ + + + +P + + AF + + I +
Sbjct: 312 LVRPSMANFRGSAGGSNVTLVPADADAILELPNVAFAVPEMTSTVTLRRGNIDYQTTANG 371
Query: 130 QNSFS----RFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ + + + P G +
Sbjct: 372 TVPQFVEAKSWPVGRGEFINSDDMEGYAPVTVLGQTVVKTLFPDGSDPIGQYVLVNKIPF 431
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ M + + +V + L + + + I V VKDP AI+ T E I
Sbjct: 432 QVIGVMSEMGASAGGNDQDDVVLVPLTTGSMRIFGQRNIRTITVEVKDPSAIDLTQEKIQ 491
Query: 246 RILGNGVVVID 256
+L D
Sbjct: 492 ALLNERHKKED 502
>gi|207092433|ref|ZP_03240220.1| hypothetical protein HpylHP_05788 [Helicobacter pylori
HPKX_438_AG0C1]
Length = 364
Score = 58.2 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 45/224 (20%), Positives = 85/224 (37%), Gaps = 2/224 (0%)
Query: 48 SVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVS 107
++MNG ++ K++ +N + + + + + P+++ + S
Sbjct: 1 AIMNGMSKEFEKKLFVMNYPLTLYTTSPYGISEEVVQALEKKFPNLLFSPYLQTQSLIKS 60
Query: 108 GLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK 167
S G V S + + N ++ F +I+GK L +L + + K
Sbjct: 61 AHSMNGGVVFGVDFSKERRINEVLNDALKNTNENDLFKNPFNLIVGKSLRYSLNLDLNQK 120
Query: 168 INILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSG 226
++ + T + + K +T+ G F YD +Y SLQ L G
Sbjct: 121 ADLFFTELEPTGLTLSPIMKRFTIKGDFDSGLKSYDMSYMYASLQAISAIRRLPLGLYDG 180
Query: 227 IEVFVKDP-DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ V+ K P IE + I +G+ + W Q+ FFS E
Sbjct: 181 VHVYSKAPMKDIENLRNALKTINHHGIGIEGWWQQNGNFFSAME 224
>gi|119896902|ref|YP_932115.1| ATP-binding/permease fusion ABC transporter [Azoarcus sp. BH72]
gi|134048477|sp|A1K323|MACB_AZOSB RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|119669315|emb|CAL93228.1| ATP-binding/permease fusion ABC transporter [Azoarcus sp. BH72]
Length = 656
Score = 58.2 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/255 (14%), Positives = 91/255 (35%), Gaps = 15/255 (5%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A R L +N S ++ +G++IGV ++I ++++ +G + ++ ++ + +++
Sbjct: 272 ALRALRAN------LFRSALTLLGIVIGVASVIAMLAIGDGAKAKVVDQISAMGTNLLTV 325
Query: 72 QKYYPLVDYQFI-----ANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
+ P + + I ++ VL V Q+ L + + + S
Sbjct: 326 RPGAPNQRGRETTATLVIEDVRAIAELPNVLASVPEQSASVTLRADNTDQRTTANATSWN 385
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ ++ G + D + + + G + P G +
Sbjct: 386 YGVARNWPVASGTFFSAEDEARYATVA----VLGQTTAGALFPGVDPIGQYVLVNNIPFQ 441
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ + + +V++ L + + + V V+D I+ T + +
Sbjct: 442 VIGVMSPKGATPWGQDQDDIVFVPFTTGSLRVTGQRYLRNVTVAVEDVSRIDATQNEVSQ 501
Query: 247 ILGNGVVVIDWQQRY 261
+L V D+Q R
Sbjct: 502 LLLARHGVEDFQIRN 516
>gi|297520946|ref|ZP_06939332.1| hypothetical protein EcolOP_25157 [Escherichia coli OP50]
Length = 51
Score = 58.2 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGF 53
+ +++ R+ R+ +S+ S IS IG+ +GV LIV +S MNGF
Sbjct: 1 MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGF 51
>gi|217076549|ref|YP_002334265.1| macrolide export ATP-binding/permease protein MacB [Thermosipho
africanus TCF52B]
gi|217036402|gb|ACJ74924.1| macrolide export ATP-binding/permease protein MacB [Thermosipho
africanus TCF52B]
Length = 393
Score = 58.2 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/245 (12%), Positives = 84/245 (34%), Gaps = 7/245 (2%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A R L N+ +F +S +G++IGVMA+I+V+S+ NG + + I +
Sbjct: 6 FKEAIRSLMHNKMRSF------LSMLGIVIGVMAVIIVLSLGNGATYSVKSEIESIGSN- 58
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
V + + ++ + L ++ +G + ++ +
Sbjct: 59 VFFVMAKRTKYGKLTLDDIEEMKRQAMYLTDITPSFSSNGNFKYAENTISTQFYATNPDF 118
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ + + +G + + + + + + L + + K
Sbjct: 119 INIFGLKVESGRLINELDFEGGLKVAVIGSYVAEELFGEEDPLGKEIKLYINNRFLPLKV 178
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
VL + + +V++ + + V+ K+ + +E+ + + L
Sbjct: 179 VGVLEETGSKLFLNVDNVVFIPFTTVEQRLLKLDTVNQFFAKAKNSEVVEQAKDELEIFL 238
Query: 249 GNGVV 253
+ +
Sbjct: 239 FSRLK 243
>gi|156976627|ref|YP_001447533.1| hypothetical protein VIBHAR_05401 [Vibrio harveyi ATCC BAA-1116]
gi|156528221|gb|ABU73306.1| hypothetical protein VIBHAR_05401 [Vibrio harveyi ATCC BAA-1116]
Length = 409
Score = 57.9 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/259 (14%), Positives = 83/259 (32%), Gaps = 20/259 (7%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFR--------EDMIKRV 61
+AWR L+ ++ ++ ++ + + + + + G + +
Sbjct: 4 KLAWRNLWRQKRRTLLTASALALVLFLSL------ITRAFQEGSYTSNIKNAAKFYTGLI 57
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
N ++ I V+ ++ GV+V G+
Sbjct: 58 QLQNPEFGDSSSIDDVLPQTSTFISAAKNNPNIDVVLPRVESFALAAKDERSKGVMVMGV 117
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
N + K V++G LA L + + D++ +
Sbjct: 118 EAEAEDKYSNISDKLIEGSYI-QSGQKSVLVGGGLANYLQLKVDDELVLYGAGYRGQTAA 176
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
Y + G+ D+ +VYM L AQ ++L++ V+ + + + T
Sbjct: 177 GL-----YQISGILHFPLQQLDSQLVYMPLDTAQSLYSLDDQVTAWVLNTESLRDLPDTV 231
Query: 242 ENIVRILGNGVVVIDWQQR 260
E + G V V DW++
Sbjct: 232 EQLKAEYGKNVAVKDWKEL 250
>gi|88857928|ref|ZP_01132570.1| hypothetical protein PTD2_11099 [Pseudoalteromonas tunicata D2]
gi|18643163|gb|AAL76237.1|AF441247_1 DppA [Pseudoalteromonas tunicata]
gi|88819545|gb|EAR29358.1| hypothetical protein PTD2_11099 [Pseudoalteromonas tunicata D2]
Length = 418
Score = 57.9 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/267 (15%), Positives = 85/267 (31%), Gaps = 9/267 (3%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMAL-------IVVMSVMNGFREDMIKRVL 62
+A R L N++ + ++ I +MI M L +V + V G +++
Sbjct: 4 KLALRNLLRNKRRSILTSVIIIFAFSMMILFMGLSDGGHKAMVDIGVKMGLGHVVVQHPQ 63
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ + P Q I ++ + V ++ QA G++ SGV
Sbjct: 64 YRDDPALAHLIRTPEEVKQTILSQQPQLQVVARLRADALIQAGRHGIALSISGVEPELER 123
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + G + G L L ++ +I G
Sbjct: 124 QVSAIADDKAIEQGETLAAFTQSHPHGNLAGIVLGATLATNLEVRIGDTVTLTVKPASGG 183
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA-IEKTH 241
+ ++ V G+F+ + D + + Q ++ VS + ++ +
Sbjct: 184 DLARSAFQVAGIFKTGLHELDTFWAEVPITALQRLLEVDGQVSELALYSPSGSDGVGLLT 243
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCY 268
+I L V WQ +S
Sbjct: 244 ASIRAQLPE-YGVQPWQTAAPELYSAV 269
>gi|330507984|ref|YP_004384412.1| efflux ABC transporter permease [Methanosaeta concilii GP-6]
gi|328928792|gb|AEB68594.1| efflux ABC transporter, permease protein [Methanosaeta concilii
GP-6]
Length = 412
Score = 57.9 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/263 (14%), Positives = 79/263 (30%), Gaps = 20/263 (7%)
Query: 26 SIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIAN 85
+ +S +G++IGV+A++V++SV G + + ++ V+
Sbjct: 21 RFKTLMSSLGIIIGVLAIVVMLSVGEGLYSGVSSQFSTLDLDVIHVIPGSARFGGPDGEP 80
Query: 86 RLDFIPDVIKVLP-------------FVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNS 132
+ K V+ Q S + S + ++ D Q+
Sbjct: 81 GSRNAAEPAKFTDKDTKVLENVVGVKNVAPQTGASVVISFRNTNSSGSLTGVDPDKEQDL 140
Query: 133 FSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK-INILSPYGDVTPMGMGIRSKSYTV 191
+ + ++IG +++ I Y D +
Sbjct: 141 KEKVAQGRWLSGSDYRSIVIGNGISQETFRMKVTPGNKIRLYYRDQPMDFTVVGVLEEEE 200
Query: 192 LGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN-AVSGIEVFVKDPDAIEKTHENIVRIL-- 248
F D + +Y++ + + + EN +V V DPD ++ E I+ L
Sbjct: 201 ESGFGGGMGDSADNAMYVTHKAMEELLDEENYYYQTFQVTVSDPDQVDYIIERIINDLRR 260
Query: 249 ---GNGVVVIDWQQRYQIFFSCY 268
+ S
Sbjct: 261 YHKDEAYDATTARDMLSTLMSTL 283
>gi|77919967|ref|YP_357782.1| ABC transporter permease [Pelobacter carbinolicus DSM 2380]
gi|77546050|gb|ABA89612.1| ABC-type transport system, permease component [Pelobacter
carbinolicus DSM 2380]
Length = 407
Score = 57.9 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 46/269 (17%), Positives = 101/269 (37%), Gaps = 21/269 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGF-REDMIKRVLGINGH 67
+ +A R ++ N++ +++++ +++ + LI+ + + +G ++ + GH
Sbjct: 3 LSLALRNIWRNKRRTLLTLSA------MVVSLALLILALGIFSGMLQDMLASATEQYRGH 56
Query: 68 VVIQQKYYPLVDYQFI--------ANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
+VI Y F L+ PDV+ V P + G +S + +
Sbjct: 57 LVISMPGYQQDREMFNGFVPPLGLLEHLESNPDVLGVSPRLRGFGLLSHG-NNTYPAELL 115
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
GI + N D ++G+ LA+ LG+++GD++ ++ D +
Sbjct: 116 GIRPGHERQVTNLADHLIMGRYPAPDATNEALLGRGLAQKLGVAMGDELVFVTQAADGSI 175
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
TV G+F +DN +V + L Q LE + + + ++ P +
Sbjct: 176 GNDL-----LTVAGIFATGDAAHDNSLVLVPLPWLQDVMVLEKHIHELALRIRHPREAQA 230
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ L + + W
Sbjct: 231 LAHRLAAELPGRLTAMTWGALMPELHEAI 259
>gi|110597037|ref|ZP_01385326.1| Protein of unknown function DUF214 [Chlorobium ferrooxidans DSM
13031]
gi|110341228|gb|EAT59693.1| Protein of unknown function DUF214 [Chlorobium ferrooxidans DSM
13031]
Length = 424
Score = 57.9 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/275 (13%), Positives = 89/275 (32%), Gaps = 30/275 (10%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A+ +L ++ + ++ +GV +G L+ +SV G ++I +V+ HV++
Sbjct: 9 IAFVHLRERKRQ------TLLTALGVAVGSAMLVTTISVARGSSSNVIAKVIDTMPHVMV 62
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
+ + I + ++ Q + + + S ++
Sbjct: 63 TAERVVPLIPDNIIGQNSRRIAMVTKNITPDKQEVIKNYAGVVESIRSVKELQSISPFVL 122
Query: 131 NSF---------------------SRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN 169
+ G N ++ + L + K
Sbjct: 123 SKLLARNKTRFTPCVARGVVPQLEGEIAGLKKNLIEKNALEELSYTPNGILVGDLLAKKL 182
Query: 170 ILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIE 228
+ V + T++G F F D Y++L AQ + N+V+GI
Sbjct: 183 NAGYHSRVVLVTKNSEEFPVTLVGRFSSGFNAKDEREAYVNLALAQRMEGIASNSVTGIG 242
Query: 229 VFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQI 263
+ + ++T + R+ +G W + +
Sbjct: 243 MRTAHVERAKETAAEVQRL--SGYKSESWDETNRN 275
>gi|116753898|ref|YP_843016.1| hypothetical protein Mthe_0585 [Methanosaeta thermophila PT]
gi|116665349|gb|ABK14376.1| protein of unknown function DUF214 [Methanosaeta thermophila PT]
Length = 402
Score = 57.9 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/263 (16%), Positives = 84/263 (31%), Gaps = 27/263 (10%)
Query: 26 SIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLV------- 78
+ +S +G++IGVMA++V++SV G + + ++ V+
Sbjct: 18 RFKTMMSSLGIIIGVMAIVVMLSVGEGLYSGVSSQFSALDLDVIHVSPGRFTFGGPPTRS 77
Query: 79 ------DYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNS 132
L+ IP V V P S VS ++ S L+ +
Sbjct: 78 PEEPAKFTDKDTKLLENIPGVRNVAPQTSTGVIVSFRNTNASATLIGVDPEKEHDLKSKI 137
Query: 133 FSRFYGNVSNDFDRGKGVIIGKDLARNLGI-SIGDKINILSPYGDVTPMGMGIRSKSYTV 191
+ S+ G + + R +I Y D+ +G+ +S +
Sbjct: 138 SQGRFLTESDYTSIVIGSGVADGIFRMRISPGNRIRIYYEDNYMDLKVVGVLREEESSGM 197
Query: 192 LGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSG-IEVFVKDPDAIEKTHENIVRIL-- 248
N +Y++ + + EN G +V V DP+ +++ + I L
Sbjct: 198 -------RAGNINTQMYVTHKAMKELLGRENYYYGTFQVTVDDPETVDEVVDRIKLDLER 250
Query: 249 ---GNGVVVIDWQQRYQIFFSCY 268
+ S
Sbjct: 251 YHKDEAYDATTARDMLTSLMSIL 273
>gi|315301069|ref|ZP_07872377.1| macrolide export ATP-binding/permease protein MacB [Listeria
ivanovii FSL F6-596]
gi|313630562|gb|EFR98387.1| macrolide export ATP-binding/permease protein MacB [Listeria
ivanovii FSL F6-596]
Length = 402
Score = 57.9 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/248 (13%), Positives = 87/248 (35%), Gaps = 20/248 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + AW+ L +++ +F ++ +G++IGV ++I+++S+ NG +++ ++
Sbjct: 7 MKM--------AWKQLKASKLRSF------LTMLGIIIGVASVILLVSLGNGVTQEVDEQ 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + +++ + ++ + + ++ V + + +
Sbjct: 53 MGDLGSNLITVVNSSVNPNDKYTYDEVMKYQNIDGVKSVSPELSGQVNATFDYKNSSNKV 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
I +D S G D G + +G ++ + T
Sbjct: 113 IGTNDQYKAARSLEMSEGRFLLPIDTEYGQKVAV-----IGSTVASDLFGFGNPIGETIR 167
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G+ K VL + +++ + AQ + V I V K + ++
Sbjct: 168 LNGMPYKVVGVLKEKGASMMGSSDDQIFIPISSAQRLL-KDTNVRTIYVETKTAEDVDFV 226
Query: 241 HENIVRIL 248
+ L
Sbjct: 227 VNTLESRL 234
>gi|51598339|ref|YP_072527.1| hypothetical protein BG0077 [Borrelia garinii PBi]
gi|51572910|gb|AAU06935.1| hypothetical protein BG0077 [Borrelia garinii PBi]
Length = 417
Score = 57.5 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/242 (13%), Positives = 88/242 (36%), Gaps = 5/242 (2%)
Query: 28 ASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRL 87
+ + + + +G + +I+ +S+MNGF+ D +V + ++
Sbjct: 21 LTIVIILSITLGEIIIILTISIMNGFQNDF----FLSTTNVESGNLKIENELTKEEIKKI 76
Query: 88 DFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRG 147
I ++ + Q + + + + D QN + +
Sbjct: 77 KKIEEIKHINKIYETQGIGIQDYYYPTILHIIAVDIKDLKKDQNFITFTGLEKDELDLKD 136
Query: 148 KGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMV 207
+IIG L+ N + D + ++ + + K++ + +F+ + + ++
Sbjct: 137 DEIIIGNVLSYNFNLLKNDTLRLIIADEIKNFISLENDIKNFKIKSIFKSNYAKINENLI 196
Query: 208 YMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSC 267
+M++ L N+ +V K+ + K E I + + + V W + + F+
Sbjct: 197 FMNIDYFIKNNLLRNSNINYQVKTKNLNPSNKLIEKI-KAINQKIKVKTWNEYNKEFYKA 255
Query: 268 YE 269
+
Sbjct: 256 LK 257
>gi|91216581|ref|ZP_01253547.1| ABC transporter permease protein [Psychroflexus torquis ATCC
700755]
gi|91185375|gb|EAS71752.1| ABC transporter permease protein [Psychroflexus torquis ATCC
700755]
Length = 411
Score = 57.5 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 52/274 (18%), Positives = 106/274 (38%), Gaps = 12/274 (4%)
Query: 5 SRFEVIVAWRYL-FSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FE ++ R + S+ K++ + I+ + IGV+ + + ++ G +E + +++
Sbjct: 1 MNFEYFISKRLVTKSDYKSSISAPIIKIAISAIAIGVVMMFIAVATGFGLQEKIREKIAA 60
Query: 64 INGHVVIQQKYYPL-------VDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
NGH+VI V Q I+ + V+ + + + G+
Sbjct: 61 FNGHIVINNFTNNQATITQNPVSTQQEFYPSFTSIPEIEHIQKVATKYGIIRTETDFEGI 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
+V+G+ F D + V+I LA LG GDK+ + D
Sbjct: 121 VVKGVDEQYRWEYLEEFLVDGVLPVFDESISREVLISDYLATRLGFKTGDKLIVYFLRED 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPD 235
RS T+ G+F F ++D + L++ Q + N + E+FV+D +
Sbjct: 181 QDR---LPRSVGLTISGIFDSGFKEFDETYIIADLKQIQRLNDWSANEIGQFELFVEDFN 237
Query: 236 AIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
I++ + + + + + Y F +
Sbjct: 238 DIQEVGYKVYEEVDSFLNASTIVELYPSIFEWLK 271
>gi|294101494|ref|YP_003553352.1| protein of unknown function DUF214 [Aminobacterium colombiense DSM
12261]
gi|293616474|gb|ADE56628.1| protein of unknown function DUF214 [Aminobacterium colombiense DSM
12261]
Length = 407
Score = 57.5 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/261 (14%), Positives = 85/261 (32%), Gaps = 14/261 (5%)
Query: 3 IFSRFEV-IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+ S +E +++R L +N+ S ++ +G++IGVMA+I++ +V +G +++ +R
Sbjct: 1 MLSLYETSKISFRSLRANKTR------SALTMLGIVIGVMAVIIMFAVGSGANKEIAERF 54
Query: 62 --LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
LG N VV + +IA+ L + + V
Sbjct: 55 SSLGSNMIVVRPETITFGGSRSYIAHNLTIDDAMSIGEECSAVAYVAPYYGGTAQAVYGN 114
Query: 120 GISNSDFSYLQNS--FSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
+ + + F R S + V + + + P G +
Sbjct: 115 ENYPARVTGTTSDYLFVRDLSLASGRTFTDQDVRSATKVCIVGQTIVDNLFVTEDPIGKI 174
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE---NAVSGIEVFVKDP 234
+ + + ++ +V + + Q S I V
Sbjct: 175 LRLKGVPMVVIGLLNKIGESAMGRDEDDIVLVPITTVQRRLFSPQRMGMASSISVKALSE 234
Query: 235 DAIEKTHENIVRILGNGVVVI 255
++ E I +L +
Sbjct: 235 QHLDLAQEQIEALLAQRHRIK 255
>gi|122064314|sp|Q8YIT2|MACB_BRUME RecName: Full=Macrolide export ATP-binding/permease protein MacB
Length = 647
Score = 57.5 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/249 (12%), Positives = 71/249 (28%), Gaps = 8/249 (3%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A R L +N + ++ +G++IGV +++ ++++ G + ++ R+ + ++
Sbjct: 260 KMALRALRAN------IFRTVLTLLGIIIGVSSVVTMLAIGTGAQNTILDRINAMGTDLI 313
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ + L + A + + +
Sbjct: 314 LVRPAMAGFRGSGSIATLVPQDADAILELPNVKSAVPEVTGTVTLRRGNVDYQSQANGTV 373
Query: 130 QNS--FSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ + + + +P GD +
Sbjct: 374 PAFSLSEIVESRQRQLHHPERYRYLRPCGWLGTTVVKTLFPDGSNPVGDYILIQKIPFQI 433
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
T+ + +V + L L + V I V VKD I+ T I +
Sbjct: 434 IGTLEPKGAGFGGSDQDDVVVVPLSTGNLRLFGQKYVRSITVQVKDSSLIDTTQNQIQSL 493
Query: 248 LGNGVVVID 256
L D
Sbjct: 494 LDQRHKKRD 502
>gi|297518071|ref|ZP_06936457.1| outer membrane-specific lipoprotein transporter subunit LolC
[Escherichia coli OP50]
Length = 295
Score = 57.5 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 49/122 (40%), Gaps = 4/122 (3%)
Query: 148 KGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMV 207
VI+G+ LA LG++ GD+I ++ P I S+ + + D +
Sbjct: 38 YNVILGEQLASQLGVNRGDQIRVMVPSASQFTPMGRIPSQRLFNVIGTFAANSEVDGYEM 97
Query: 208 YMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFS 266
+++++A ++G +++ +P ++ + L G DW+ R F
Sbjct: 98 LVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLS---QQKLPEGSKWQDWRDRKGELFQ 154
Query: 267 CY 268
Sbjct: 155 AV 156
>gi|110637976|ref|YP_678183.1| ABC transporter permease [Cytophaga hutchinsonii ATCC 33406]
gi|110280657|gb|ABG58843.1| ABC transporter, permease [Cytophaga hutchinsonii ATCC 33406]
Length = 405
Score = 57.5 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/265 (11%), Positives = 83/265 (31%), Gaps = 2/265 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
++ R + N + +F S+ I+ I + +G + + + +++GF+ + +++
Sbjct: 1 MNLYYFISSR-IQKNDRQSFSSLVHRIAVIIIFLGFLLSVTSLCILDGFKTSIRQKIFSF 59
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H+ + + + D IK +P + VS
Sbjct: 60 GAHIHLTKYDLDKSYEESPFIINTGTLDSIKAIPNIEHVQGVSHKPCLLKSSSEIQGVIL 119
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
RF N+ + +
Sbjct: 120 KGVGPDFDIDRFKSNMLEGRFITFNDSGYSKQIVISEKIAHKLNLKTGDSLLLYFVQNPP 179
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLENAVSGIEVFVKDPDAIEKTHEN 243
R + ++ G+++ + D + +Q ++ + G+E++V D + ++ T
Sbjct: 180 RYRKVSISGIYKTGLEELDELFIIGDIQLNRVLSAWSPKQIGGLEIYVSDFNMLDSTASE 239
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCY 268
+ + + + + +Y F
Sbjct: 240 VYKRMEYDMQIQLITDKYLQIFDWL 264
>gi|222056597|ref|YP_002538959.1| protein of unknown function DUF214 [Geobacter sp. FRC-32]
gi|221565886|gb|ACM21858.1| protein of unknown function DUF214 [Geobacter sp. FRC-32]
Length = 400
Score = 57.5 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/277 (13%), Positives = 91/277 (32%), Gaps = 25/277 (9%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F ++++ R + N +F ++ +G++IGV A+I ++++ NG + + ++
Sbjct: 1 MFWN-TLLLSMRAIRRNLMRSF------LTILGIVIGVAAVITMVTLGNGATKSVSDQIS 53
Query: 63 GINGHVVIQQKYYPLVD-----YQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVL 117
+ ++++ +F + D I + I + V+ + + +
Sbjct: 54 SMGSNLLMVIPGQRFGPGSEGAPKFKSADADAIRNQITAIERVAPVVSKTVTTVYQARNW 113
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
I+ S+ Y ++ GK + G +P G
Sbjct: 114 STVINGSNNEYFESGNWELASGR---SFSEAEERAGKAVCVIGETVRGKLFGRQNPVGSE 170
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
+ + + + V M L+ Q + + V VK +I
Sbjct: 171 IRIKQFSCEVIGLLKAKGQSAMGSDQDDTVVMPLRTVQRRLTGNQDIGRLTVSVKQGASI 230
Query: 238 EKTH----------ENIVRILGNGVVVIDWQQRYQIF 264
++ I + V+D +Q Q
Sbjct: 231 DEVKNQLTLLMRERRKIAENEEDDFRVMDTRQIAQTL 267
>gi|148253372|ref|YP_001237957.1| putative lipoprotein-releasing system transmembrane protein lolC
[Bradyrhizobium sp. BTAi1]
gi|146405545|gb|ABQ34051.1| putative lipoprotein-releasing system transmembrane protein lolC
[Bradyrhizobium sp. BTAi1]
Length = 408
Score = 57.5 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/281 (15%), Positives = 84/281 (29%), Gaps = 21/281 (7%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M+ + FE I A R+L R I +GV++ + A++ G + IKR
Sbjct: 1 MNRWLPFEWIAAVRFLREGRLQTLFIIGGIAIGVGVIVFMSAMLA------GLEANFIKR 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
VL + + + ++ +S + + + +
Sbjct: 55 VLTSQPQIQLLTPDQVARPLRNDHGVIEDAIVQRPSQRVISIDQWPKIRNQMQAMPEITA 114
Query: 121 ISN-------------SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK 167
+S S L Y + D + K
Sbjct: 115 VSPTISGSALAIRGDASRAVTLSGIEPESYFTIVRVPDYIAAGEPRLTSDDIIIGIELAK 174
Query: 168 INILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGI 227
+ ++ TV G+ + + Y++L+ AQ + V+ I
Sbjct: 175 DLGAVVGDKLNVQAASGANRVLTVTGLVDLGNKGVNQRAAYVALRTAQSLLGMVGGVTTI 234
Query: 228 EVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
++ V+D A E + I N V W + FF+
Sbjct: 235 DITVQDIYAAEDIAQRIQAA--NLVKADSWIKTNAQFFTAV 273
>gi|330814004|ref|YP_004358243.1| lipoprotein releasing system transmembrane protein LolC [Candidatus
Pelagibacter sp. IMCC9063]
gi|327487099|gb|AEA81504.1| lipoprotein releasing system transmembrane protein LolC [Candidatus
Pelagibacter sp. IMCC9063]
Length = 308
Score = 57.5 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 53/125 (42%), Gaps = 3/125 (2%)
Query: 144 FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYD 203
IG + A +LG+++GDKI ILS + TP G + V +F ++D
Sbjct: 38 NFENNYASIGSNFAADLGVTVGDKITILSSTTESTPFGNIPEQFDFIVGSVFHSGIYEFD 97
Query: 204 NGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQI 263
+ V ++ + + + + IE+ + +PD +K + + N V W +
Sbjct: 98 SNFVLINAESSPDFIKKQGTNKNIELKLNNPDQAQKVKDLLEE---NKFKVFSWIDNNKT 154
Query: 264 FFSCY 268
F+
Sbjct: 155 FYDAL 159
>gi|313895955|ref|ZP_07829509.1| efflux ABC transporter, permease protein [Selenomonas sp. oral
taxon 137 str. F0430]
gi|312975380|gb|EFR40841.1| efflux ABC transporter, permease protein [Selenomonas sp. oral
taxon 137 str. F0430]
Length = 405
Score = 57.5 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/260 (12%), Positives = 79/260 (30%), Gaps = 12/260 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +A L +N+ S ++ +G++IGV A+I ++S+ G R +
Sbjct: 1 MLFKECFAMALNALLANKLR------SLLTMLGIIIGVGAVIAMVSIGMGVRTSVTNSFA 54
Query: 63 GINGHVVIQQKYYPLVDYQFIA----NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
+ +++I A L + +++ V
Sbjct: 55 SLGTNMLIVMPGSTNKGGIRGAAGSRKSLKYDDAKAIAAKIKGIDYVSPTVNTSYQVVNG 114
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGK--DLARNLGISIGDKINILSPYGD 176
N++ + + + + K +A + +P G
Sbjct: 115 NLNWNTEVMGVTPELMQIRSLKVENGSFITASDLSKRSRVAVIGATVAANLFGAENPVGQ 174
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
+ + + + ++Y+ L AQ V I + V DP
Sbjct: 175 NIRINNQPFKVIGLIASKGQSSMGQDQDDVIYIPLTTAQERMLAITHVQSINIQVSDPAR 234
Query: 237 IEKTHENIVRILGNGVVVID 256
+++ I +L + +
Sbjct: 235 MDQVQSEIETLLRSRHHIRT 254
>gi|94267998|ref|ZP_01291055.1| Protein of unknown function DUF214 [delta proteobacterium MLMS-1]
gi|93451770|gb|EAT02530.1| Protein of unknown function DUF214 [delta proteobacterium MLMS-1]
Length = 388
Score = 57.5 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/241 (14%), Positives = 72/241 (29%), Gaps = 12/241 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
++ + L +R S ++ +G+ V L V+S GF E + + + H
Sbjct: 5 FKLSVQNLLRHRTR------SLLTMLGIAAAVGVLFSVLSFNRGFEEGLAREMQATGLH- 57
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
++ A L + V Q + + + +LV ++N D
Sbjct: 58 --FMVAPSGCAHEVAALVLHGAVTPRYLDAGVIDQIRATDGVALATPILVAQLANPDRQR 115
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
L + G V + I + + ++ S
Sbjct: 116 LDLIYGLEMGLVEEIKPDWQ---ITGRVPTAPDELLLGYEVAAHDDLELGARYRYPGSDH 172
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ D+ VYM + AQ + + I V+ P+ + + N+
Sbjct: 173 TFTVTGIIGNTTSQDDAFVYMPIATAQELMDASGKATAIGAKVEQPERLGQIISNLEEAA 232
Query: 249 G 249
Sbjct: 233 P 233
>gi|262375761|ref|ZP_06068993.1| lipoprotein release ABC transporter permease [Acinetobacter lwoffii
SH145]
gi|262309364|gb|EEY90495.1| lipoprotein release ABC transporter permease [Acinetobacter lwoffii
SH145]
Length = 407
Score = 57.5 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/284 (13%), Positives = 85/284 (29%), Gaps = 24/284 (8%)
Query: 1 MS-IFSRF--EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDM 57
M +F R E +A +L R + + + V++ + ALI G + ++
Sbjct: 1 MKNLFGRLWIEWKIAVSFLREGRAQSIMITIGVAVGVAVIVFITALI------QGLQANI 54
Query: 58 IKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS--- 114
++R LG H+ + A + + + + S + +
Sbjct: 55 VERTLGTQAHIRLLSPDEVNRIVSPPAGTVQLLQEDKRAQRLRSINNWQQITETLDQLPV 114
Query: 115 ----------GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISI 164
V+ + L Y + + + L S
Sbjct: 115 LTAVSPVVSGPAFVQRGDAIESVALVGMNLERYQQIIPLKEYLISGQLRVGADDVLIGSQ 174
Query: 165 GDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAV 224
K + + S + G+F + + D VY+ L++AQ L V
Sbjct: 175 LAKDLGVQVGSKLRLDTGQQNSALVNIAGIFELGVRELDARYVYLDLKQAQSLLGLPGGV 234
Query: 225 SGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
I++ + + ++ + R+ + W + +
Sbjct: 235 PVIDLTIANIFEADQVAAQVGRL--TSLKAESWIETNAQLMNAI 276
>gi|85859622|ref|YP_461824.1| export ABC transporter permease [Syntrophus aciditrophicus SB]
gi|85722713|gb|ABC77656.1| export ABC transporter permease protein [Syntrophus aciditrophicus
SB]
Length = 409
Score = 57.1 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/267 (14%), Positives = 94/267 (35%), Gaps = 16/267 (5%)
Query: 3 IFS-RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+ + + +++R L N+ S ++ +G++IGV A+I +++V G E + ++
Sbjct: 1 MINIPSTLKISFRALRVNKMR------SALTMLGIIIGVGAVIAMLAVGTGAGEKISGQI 54
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ ++++ + + + V ++ +G
Sbjct: 55 STMGSNLIMVLPGSTTSGGLRMGAGTVQTLTMADAEAILKECPAVLEVAPTLNGGAQVVY 114
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
N ++S + + + V + +D+ ++I + + +G + P+G
Sbjct: 115 GNQNWSTVIHGTTPGILTVRDWTLTSGRSFTEQDIRSATKVAILGQTVADNLFGGMEPVG 174
Query: 182 MGIRSKSYTVLG------MFRMRFPDYDNGMVYMSLQEAQ-LYFN--LENAVSGIEVFVK 232
IR K + + ++Y+ L AQ F V I V
Sbjct: 175 QIIRIKKVPFTVIGLLELKGQSPMGQDQDDIIYIPLTTAQKKIFGTSFPGMVRSIMVKAA 234
Query: 233 DPDAIEKTHENIVRILGNGVVVIDWQQ 259
+ +E + +L + D Q+
Sbjct: 235 SAEDLEAAEGQVTELLRQRHRITDRQE 261
>gi|309791694|ref|ZP_07686186.1| protein of unknown function DUF214 [Oscillochloris trichoides DG6]
gi|308226316|gb|EFO80052.1| protein of unknown function DUF214 [Oscillochloris trichoides DG6]
Length = 409
Score = 57.1 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/272 (15%), Positives = 99/272 (36%), Gaps = 22/272 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +AWR ++ N + + I+ + +++GV+ L+ ++ G + + + I G
Sbjct: 5 LRLAWRNMWRNWRR------TVIALVAIILGVILLLFFDGLIKGSDQAIFGNAIRIYGGN 58
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQ----------AFVSGLSSGGSGVLV 118
+ + PDV+ + A + V +
Sbjct: 59 LQIHAPGFRAKANRLPLLPLDNPDVVVSTVQSRPEVLAVAQRISTAGIISNRGNTLRVGI 118
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
I + L + ++IG+ +A L + +GD +N++ +
Sbjct: 119 TAIDPRIEAPLSIQAEYMVQGRFLLPEDRDAIVIGQGMAEALQVHVGDTVNLVGRRKNE- 177
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+R S ++G++ + P+ + VY++L +AQ +NL + + +F+K
Sbjct: 178 ----AMRQHSMQIVGIYDLGMPEIEKASVYIALSDAQTLYNLRDQTTEAVIFLKQAGEEA 233
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+++ L V WQ ++
Sbjct: 234 ALMQSLQAALP-AYEVDTWQTLRPEITETMQT 264
>gi|269963643|ref|ZP_06177966.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269831656|gb|EEZ85792.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 409
Score = 57.1 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/258 (12%), Positives = 75/258 (29%), Gaps = 18/258 (6%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMS-VMNGFREDMIKRVLGINGHV 68
+AWR L+ ++ ++ ++ AL++ +S + F+E +
Sbjct: 4 KLAWRNLWRQKRRTLLTASAL-----------ALVLFLSLITRAFQEGSYTSNIKNAAKF 52
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
++ ++ D +P + + + +
Sbjct: 53 YTGLIQLQNPEFGDSSSIDDVLPQTNTFISAAKNNPNIDVVLPRVESFALAAKDERSKGV 112
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKD------LARNLGISIGDKINILSPYGDVTPMGM 182
+ + ++ L +
Sbjct: 113 MVLGVEPEAEDQYSNISDKLIEGSYIQSGQKAVLVGGGLANYLQLKVGDELVLYGVGYRG 172
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ Y + G+ D+ +VYM L AQ ++L++ V+ + + A+ T E
Sbjct: 173 QTAAGLYQISGILHFPLQQLDSQLVYMPLNTAQSLYSLDDQVTAWVLNTESLRALPATVE 232
Query: 243 NIVRILGNGVVVIDWQQR 260
+ G V V DW++
Sbjct: 233 QLKAEYGKNVAVKDWKEL 250
>gi|256958266|ref|ZP_05562437.1| macrolide export ATP-binding/permease macB [Enterococcus faecalis
DS5]
gi|256948762|gb|EEU65394.1| macrolide export ATP-binding/permease macB [Enterococcus faecalis
DS5]
gi|315036554|gb|EFT48486.1| efflux ABC transporter, permease protein [Enterococcus faecalis
TX0027]
Length = 402
Score = 57.1 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/257 (14%), Positives = 83/257 (32%), Gaps = 15/257 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ A+R + N++ S ++ +G++IG+ ++I ++++ NGF+EDM+ ++
Sbjct: 1 MKRSIIWKTAFRSILKNKRR------SLLTMLGIVIGIASVITIVAIGNGFKEDMVDKLS 54
Query: 63 GINGHVV--------IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
F N L + V V Q V G G
Sbjct: 55 AEKQKENVKKISFSAYNTSDMFSDQAMFTDNDLGVVRMVPGVEKIDFDQREVDGAQKGTL 114
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ S L + ++ G + K + + ++ + +
Sbjct: 115 NFQAGPKNLSVTYELADKTTKELLAGRQLN-DGDNAKLDKTVVVDELVAKELYQDPTAAV 173
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
P + P D+ ++Y + + YF S +++ V
Sbjct: 174 NRTFPYKEQHFTIVGVTTNTSGAIGPGNDDSLLYFPKKTYEHYFGKLKDTSTLKLTVAPG 233
Query: 235 DAIEKTHENIVRILGNG 251
++ + ++ L
Sbjct: 234 YQPDQVLKETIKTLSQQ 250
>gi|229495499|ref|ZP_04389232.1| efflux ABC transporter, permease protein [Porphyromonas
endodontalis ATCC 35406]
gi|229317482|gb|EEN83382.1| efflux ABC transporter, permease protein [Porphyromonas
endodontalis ATCC 35406]
Length = 408
Score = 57.1 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/273 (14%), Positives = 94/273 (34%), Gaps = 8/273 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+A RY ++ + + S IS + V + VMA++ ++S+ NG+ E ++ V +
Sbjct: 4 KSLAFSIARRYFAQRKRFHAVQVVSAISSVAVGVVVMAVVAILSIYNGYEEVLLTSVSHL 63
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + +++ D Q I + + SS + + G+ +
Sbjct: 64 DAPLKVERADKAPFDAQESRIARLRNLPEIAASSRLIEGEGIVRSSSVYAAAHLLGLEPA 123
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGK-GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
L G++S G + + L S + L +
Sbjct: 124 YSRSLALDSLMLEGSLSALPCEYTLGGDLYQTLFSFGQTSSFMRTVSLYVPKRRGYINPL 183
Query: 184 IRSKSYTVLG----MFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIE 238
+ ++ + + +++S++E +L V + +F + + +
Sbjct: 184 LPQTAFRTTQGKAPSVLSAKEEKYDRTLFLSVEELGSLLDLPKGYVHALALFPVEGVSPK 243
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFS--CYE 269
E++ + LG V+D + + E
Sbjct: 244 TLKESLQKELGTEWRVLDRRDQQPHLLKLVAIE 276
>gi|29377448|ref|NP_816602.1| permease, putative [Enterococcus faecalis V583]
gi|227554411|ref|ZP_03984458.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Enterococcus faecalis HH22]
gi|29344915|gb|AAO82672.1| permease, putative [Enterococcus faecalis V583]
gi|227176452|gb|EEI57424.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Enterococcus faecalis HH22]
gi|315574998|gb|EFU87189.1| efflux ABC transporter, permease protein [Enterococcus faecalis
TX0309B]
gi|315581116|gb|EFU93307.1| efflux ABC transporter, permease protein [Enterococcus faecalis
TX0309A]
Length = 402
Score = 57.1 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/257 (14%), Positives = 84/257 (32%), Gaps = 15/257 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ A+R + N++ S ++ +G++IG+ ++I ++++ NGF+EDM+ ++
Sbjct: 1 MKRSIIWKTAFRSILKNKRR------SLLTMLGIVIGIASVITIVAIGNGFKEDMVDKLS 54
Query: 63 GINGHVV--------IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
F N L + V V Q V G G
Sbjct: 55 AEKQKENVKKISFSAYNTSDMFSDQAMFTDNDLGVVRMVPGVEKIDFDQREVDGAQKGTL 114
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ S L N ++ G + K + + ++ + +
Sbjct: 115 NFQAGPKNLSVTYELANKTTKELLAGRQLN-DGDNAKLDKTVVVDELVAKELYQDSTAAV 173
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
P + + P D+ ++Y + + YF S +++ V
Sbjct: 174 NRTFPYKEQLFTIVGVTTNTSGAIGPGNDDSLLYFPKKTYEHYFGKLKDTSTLKLTVAPG 233
Query: 235 DAIEKTHENIVRILGNG 251
++ + ++ L
Sbjct: 234 YQPDQVLKETIKTLSQQ 250
>gi|289807360|ref|ZP_06537989.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Typhi str.
AG3]
Length = 46
Score = 57.1 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMS 48
++ + + RY+ + F S++S IG+ +GVMAL+ V+S
Sbjct: 1 MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLS 46
>gi|262371104|ref|ZP_06064426.1| macrolide export ATP-binding/permease macB [Acinetobacter johnsonii
SH046]
gi|262313990|gb|EEY95035.1| macrolide export ATP-binding/permease macB [Acinetobacter johnsonii
SH046]
Length = 663
Score = 57.1 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/250 (15%), Positives = 83/250 (33%), Gaps = 14/250 (5%)
Query: 12 AWRYLFSNRKNAFISIA---------SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
AWR L AF +F++ +G++IG+ +++ V+++ NG ++ ++ +
Sbjct: 259 AWRSLLDRLGEAFRMALLSMNAHRMRTFLTMLGIIIGIASVVTVVALGNGSQQQILSNIS 318
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ + + + D AN +P + L + VS + S + +
Sbjct: 319 SLGTNTITVFQGRGFGDNSKTANFKTLVPADAEALATQPYVSAVSPMVSSSKTIRYQQSE 378
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVII----GKDLARNLGISIGDKINILSPYGDVT 178
+ ++ + +D+ + + SP G V
Sbjct: 379 ANATINGVGGDYFKVKGLTFKNGQTFDQRSVRDRTQDVVIDTNTQKQFFSDGSSPIGQVV 438
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+G + V+ D VYM ++ V I V + D +
Sbjct: 439 LLGSVPA-RIIGVVEPQTSAMGSDDTLNVYMPYTTVMSRMLGQSNVRNIVVQINDKYSTS 497
Query: 239 KTHENIVRIL 248
IV +L
Sbjct: 498 AAENAIVNLL 507
>gi|302340363|ref|YP_003805569.1| protein of unknown function DUF214 [Spirochaeta smaragdinae DSM
11293]
gi|301637548|gb|ADK82975.1| protein of unknown function DUF214 [Spirochaeta smaragdinae DSM
11293]
Length = 428
Score = 57.1 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 40/266 (15%), Positives = 91/266 (34%), Gaps = 24/266 (9%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A+R ++ N + + + I V + V I + + ++G E + + V V
Sbjct: 21 IAYRNIWRNGRR------TILCIIAVAVAVFFNIFMQAWISGMIEGIEEAVRTYETGHVN 74
Query: 71 QQKYYPLVDYQFIANR---------------LDFIPDVIKVLPFVSGQAFVSGLSSGGSG 115
+ ++ + ++ +P V LP ++ A + + +
Sbjct: 75 VVSNLFEEEREYYPVQYPIVDGKSATELSAEIEALPGVKAALPRITTYASLFDSTVKHAL 134
Query: 116 VLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYG 175
+ I + N R G + F + + G KI P
Sbjct: 135 LWGVDIQRERAVNVFNLTDRDDGLIEGRFPKAGSNECA--VGFEFARKAGVKIGDPIPLK 192
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD 235
V+ + + G+F + +D ++ + + Q L A + ++ ++ D
Sbjct: 193 TVSAQFSDKYWRPV-ITGIFTFDYRKFDEDVILVPIDRLQRILVLGEATQQMFIYAENAD 251
Query: 236 AIEKTHENIVRILGNGVVVIDWQQRY 261
+ + + +ILG G V +W Y
Sbjct: 252 DAPRLRDEVAKILGPGQTVREWGDNY 277
>gi|257091234|ref|ZP_05585595.1| permease [Enterococcus faecalis CH188]
gi|312905293|ref|ZP_07764408.1| efflux ABC transporter, permease protein [Enterococcus faecalis
TX0635]
gi|257000046|gb|EEU86566.1| permease [Enterococcus faecalis CH188]
gi|310631317|gb|EFQ14600.1| efflux ABC transporter, permease protein [Enterococcus faecalis
TX0635]
gi|315162472|gb|EFU06489.1| efflux ABC transporter, permease protein [Enterococcus faecalis
TX0645]
gi|315578571|gb|EFU90762.1| efflux ABC transporter, permease protein [Enterococcus faecalis
TX0630]
Length = 402
Score = 56.7 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/256 (12%), Positives = 89/256 (34%), Gaps = 13/256 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ A+R + N++ S ++ +G++IG+ ++I ++++ NGF+EDM+ ++
Sbjct: 1 MKRSIIWKTAFRSILKNKRR------SLLTMLGIVIGIASVITIVAIGNGFKEDMVDKLS 54
Query: 63 GINGHV-VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
V + + +++ F + + V+ V G + G +
Sbjct: 55 AEKQKENVKKISFSAYNTSDMFSDQAMFNDNDLGVVRMVPGVEKIDFDQREVDGAQKGTL 114
Query: 122 SNSDFSYLQNSFSRFYGNVSND------FDRGKGVIIGKDLARNLGISIGDKINILSPYG 175
+ + + + + G + K + + ++ + +
Sbjct: 115 NFQAGPKNLSVTYELANKTTKELLAGRQLNDGDNAKLDKTVVVDELVAKELYQDPTAAVN 174
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD 235
P + + P D+ ++Y + + YF S +++ V
Sbjct: 175 RTFPYKEQLFTIVGVTTNTSGAIGPGNDDSLLYFPKKTYEHYFGKLKDTSTLKLTVAPGY 234
Query: 236 AIEKTHENIVRILGNG 251
++ + ++ L
Sbjct: 235 QPDQVLKETIKTLSQQ 250
>gi|313207070|ref|YP_004046247.1| hypothetical protein Riean_1584 [Riemerella anatipestifer DSM
15868]
gi|312446386|gb|ADQ82741.1| protein of unknown function DUF214 [Riemerella anatipestifer DSM
15868]
gi|325335494|gb|ADZ11768.1| ABC transporter, permease [Riemerella anatipestifer RA-GD]
Length = 409
Score = 56.7 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/273 (14%), Positives = 102/273 (37%), Gaps = 14/273 (5%)
Query: 5 SRFEVIVAWRYLFSN-RKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+F + + + FS KN + FI + V +GV+ ++ ++ G ++ + ++
Sbjct: 1 MKFPLYFSKKIAFSKDNKNNLSKVIVFIGRLSVALGVIVSLITVATGLGAKKAIKNKMGD 60
Query: 64 INGHVVIQQKYYPLVDY-------QFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
+GH+ ++ + N++ + +V + + S + + +
Sbjct: 61 FSGHISVKSTRSNSSYNSSVLDLKEININQIKTLQEVEGMQSYASVSGILRTEENFSGIL 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
L + D + + VI+ + +A +L + + D+I + D
Sbjct: 121 LKGVGKDFDAKRFEKFLVEGSVPNFTEKGYNNEVILPEKIANDLRLKLNDEIVAIFSKED 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN-AVSGIEVFVKDPD 235
P + + V G+++ D+ + + + N++ A+ G+++F+KD
Sbjct: 181 QKP-----IYRKFKVKGIYKTDIKMIDDLFIIGDINHVRRIQNMDKTAIGGVDIFLKDMG 235
Query: 236 AIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
I++ I +G +Y +
Sbjct: 236 EIDEVFPKIEEKIGYKNYAEKITDKYPEIVNWI 268
>gi|183221930|ref|YP_001839926.1| ABC transporter permease [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189911999|ref|YP_001963554.1| lipoprotein releasing system permease LolE [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Ames)']
gi|167776675|gb|ABZ94976.1| Lipoprotein releasing system, LolE permease component [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Ames)']
gi|167780352|gb|ABZ98650.1| ABC-type transport system, permease; putative membrane protein
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 417
Score = 56.7 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 43/283 (15%), Positives = 89/283 (31%), Gaps = 29/283 (10%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A R + S + S ++ IG+++G IV +M GF+ + +++ +G +
Sbjct: 2 LFLAIRQILSRPQQ------SILTLIGIILGTAGYIVFSGIMLGFQAVITDQLVNSDGQI 55
Query: 69 VIQQKYYPLVDYQFIANRLDFIPD---------------------VIKVLPFVSGQAFVS 107
I K + + F + K+ +F
Sbjct: 56 KISPKDELITERTFDDVFFQGKEVRWLSPPSGRTDNSRLTNVLGWMDKLSNDQRVVSFAP 115
Query: 108 GLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK 167
L+ V + + + F + + N+S+ GK V + K + +
Sbjct: 116 QLTKEVIFVNGKATAPARFVGVDPNIQPKVTNLSDYIVEGKLVDLSKGTSLAIAGEGVLN 175
Query: 168 INILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGI 227
+ G ++G+ D VY SL Q +S I
Sbjct: 176 KLGAKIDDTIFVYIPGTDLVPIKIVGILSTGNRLVDEVTVYSSLSTVQSITKSSGEISQI 235
Query: 228 EVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
V +KD ++ E+ + V W + + +
Sbjct: 236 IVKIKDIRTAKEIAEDWRYFSKD--KVESWDEVNASILQVFRT 276
>gi|312144669|ref|YP_003996115.1| protein of unknown function DUF214 [Halanaerobium sp.
'sapolanicus']
gi|311905320|gb|ADQ15761.1| protein of unknown function DUF214 [Halanaerobium sp.
'sapolanicus']
Length = 416
Score = 56.7 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/279 (10%), Positives = 79/279 (28%), Gaps = 21/279 (7%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+F + +A + +F N+ F+ S + + V+ ++ +++G E +
Sbjct: 1 MKFLITIALKNMFRNKLRTFV------SILAIAFAVIVIVFARGLIDGMIESSYSLYIHY 54
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + + ++ K L + + + G + S
Sbjct: 55 DTGHIKIMDQEYEQKQRLLSLAYTVDGIADKTLSQMERELLELEGIEMVIPRVKFGAAVS 114
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVII----------GKDLARNLGISIGDKINILSPY 174
L + + + + + DK
Sbjct: 115 TEEELVRMMAWGVDGQKELEFTNLERELVEGRMVSDGNREVIMGTELLRRIDKNVGERVT 174
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
+ ++ ++G P + +V+M + A+ LE+ + + + D
Sbjct: 175 MVFNTAYSSFQGATFDIVGRIESNLPLLNKELVFMPIDTARHLLYLEDESTELLLVTDDR 234
Query: 235 DAI----EKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
D + G+ + +W++ F +
Sbjct: 235 DKAINYLPAVQNYLSENEGDRYLAQEWRE-GSSFIQLLQ 272
>gi|307352191|ref|YP_003893242.1| hypothetical protein Mpet_0023 [Methanoplanus petrolearius DSM
11571]
gi|307155424|gb|ADN34804.1| protein of unknown function DUF214 [Methanoplanus petrolearius DSM
11571]
Length = 403
Score = 56.7 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/237 (15%), Positives = 72/237 (30%), Gaps = 8/237 (3%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A++ L + ++ +G+ IGV AL+ ++S+ G R I + + I
Sbjct: 10 IAFKQLMRKKGR------IILTALGIAIGVAALVGIVSLGEGIRSQSIDMIKEQSDLTFI 63
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
+ + A + ++ L S
Sbjct: 64 EVTPDIRDGTVIPLTDSKVKALSGISGIVTAVPAVKASFATTRQTYLGIVGMESGGFEEL 123
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
G + G I + L RN G+ GD + +L G
Sbjct: 124 LEPEYSSGGPYDGKGIVLGHDIEEKLRRNEGLREGDDLTVLIRDYGE--SGAPEDRTEVF 181
Query: 191 VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ D + +V M + ++ + V V PD + + E+I ++
Sbjct: 182 AVNGVLGERDDEFDNLVLMDIDTLMEIKGYGDSYDLVYVRVDSPDNVLEVAESIKKM 238
>gi|227517398|ref|ZP_03947447.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Enterococcus faecalis TX0104]
gi|227075164|gb|EEI13127.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Enterococcus faecalis TX0104]
gi|315149149|gb|EFT93165.1| efflux ABC transporter, permease protein [Enterococcus faecalis
TX0012]
Length = 402
Score = 56.7 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/257 (14%), Positives = 84/257 (32%), Gaps = 15/257 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ A+R + N++ S ++ +G++IG+ ++I ++++ NGF+EDM+ ++
Sbjct: 1 MKRSIIWKTAFRSILKNKRR------SLLTMLGIVIGIASVITIVAIGNGFKEDMVDKLS 54
Query: 63 GINGHVV--------IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
F N L + V V Q V G G
Sbjct: 55 AEKQKENVKKISFSAYNTSDMFSDQAMFTDNDLGVVRMVPGVEKIDFDQREVDGAQKGTL 114
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ S L + ++ G + K + + ++ + +
Sbjct: 115 NFQAGPKNLSVTYELADKTTKELLAGRQLN-DGDNAKLDKTVVVDELVAKELYQDPTAAV 173
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
P + + P D+ ++Y + + YF S +++ V
Sbjct: 174 NRTFPYKEQLFTIVGVTTNTSGAIGPGNDDSLLYFPKKTYEHYFGKLKDTSTLKLTVAPG 233
Query: 235 DAIEKTHENIVRILGNG 251
++ + ++ L
Sbjct: 234 YQPDQVLKETIKALSQQ 250
>gi|312902086|ref|ZP_07761347.1| efflux ABC transporter, permease protein [Enterococcus faecalis
TX0470]
gi|311290868|gb|EFQ69424.1| efflux ABC transporter, permease protein [Enterococcus faecalis
TX0470]
Length = 402
Score = 56.7 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/257 (14%), Positives = 84/257 (32%), Gaps = 15/257 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ A+R + N++ S ++ +G++IG+ ++I ++++ NGF+EDM+ ++
Sbjct: 1 MKRSIIWKTAFRSILKNKRR------SLLTMLGIVIGIASVITIVAIGNGFKEDMVDKLS 54
Query: 63 GINGHVV--------IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
F N L + V V Q V G G
Sbjct: 55 AEKQKENVKKISFSAYNTSDMFSDQAMFTDNDLGVVRMVPGVEKIDFDQREVDGAQKGTL 114
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ S L N ++ G + K + + ++ + +
Sbjct: 115 NFQAGPKNLSVTYELANKTTKELLAGRQLN-DGDNAKMDKTVVVDELVAKELYQDPTAAV 173
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
P + + P D+ ++Y + + YF S +++ V
Sbjct: 174 NRTFPYKEQLFTIVGVTTNTSGAIGPGNDDSLLYFPKKTYEHYFGKLKDASTLKLTVAPG 233
Query: 235 DAIEKTHENIVRILGNG 251
++ + ++ L
Sbjct: 234 YQPDQVLKETIKTLSQQ 250
>gi|150401758|ref|YP_001325524.1| hypothetical protein Maeo_1336 [Methanococcus aeolicus Nankai-3]
gi|150014461|gb|ABR56912.1| protein of unknown function DUF214 [Methanococcus aeolicus
Nankai-3]
Length = 395
Score = 56.7 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/247 (14%), Positives = 77/247 (31%), Gaps = 23/247 (9%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV--- 68
A+ + + S ++ +G++IG+ A++ ++S+ G E M ++ + G+
Sbjct: 10 AFNNIKQKKTQ------SMLTMMGIVIGIFAIVSLVSIGYGVEEYMHGEMMKMGGNKLTI 63
Query: 69 ---VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+ I V V+ G + + G N+
Sbjct: 64 LPIKQFGIPPTHFFTDKDIKAIHNIRGVDSVVYGWYGGTDIEYNNEKKYVGYFYGAPNNI 123
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ IG +A +L + ++
Sbjct: 124 KKVYSETGYNIEEGRWLSNSDTYKCNIGYGVAHSLFNKNVK-----------IGDRIIVK 172
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
K + V+G+ D+ ++ + + + F+ +N + I V VKD + K I
Sbjct: 173 DKKFKVVGIMGQVGNQQDDNIIMIPISVGENIFDKKNEYNFITVVVKDGADMAKISNEIS 232
Query: 246 RILGNGV 252
L
Sbjct: 233 NKLEKSF 239
>gi|45358197|ref|NP_987754.1| hypothetical protein MMP0634 [Methanococcus maripaludis S2]
gi|44920954|emb|CAF30190.1| conserved hypothetical protein [Methanococcus maripaludis S2]
Length = 397
Score = 56.7 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 39/240 (16%), Positives = 85/240 (35%), Gaps = 9/240 (3%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A R + + S ++ IG++IG++A++ ++S+ G + + + + V+
Sbjct: 10 AGRNITQKKTQ------SLLTIIGIVIGILAIVSLISLGYGVQNYITEEISKAGASVITV 63
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
+ IA +F +K + V G V GG+ V +
Sbjct: 64 YPSQQIT---SIAMSKNFNDRDLKAVEDVRGVDVVLYGWFGGTQVTYHDQEYYSSVFATK 120
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTV 191
S + + KD + + + + I K Y V
Sbjct: 121 SSTYQIFFTEAYGYELEKGRWMKDSDKYTCVIGYSLAHDTFDREIDIGDKIEINDKKYKV 180
Query: 192 LGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNG 251
+G+ D+ + + + A F++++ + V +KD + + K E+I L +
Sbjct: 181 VGILEQIGNPDDDNSIVIPYEAASEVFDVDDEYNMFMVKIKDGEDVTKVSEDIEDELEDS 240
>gi|255974382|ref|ZP_05424968.1| macrolide transporter [Enterococcus faecalis T2]
gi|256962837|ref|ZP_05567008.1| permease [Enterococcus faecalis HIP11704]
gi|257078422|ref|ZP_05572783.1| macrolide transporter [Enterococcus faecalis JH1]
gi|257417844|ref|ZP_05594838.1| ABC transporter ATP-binding protein [Enterococcus faecalis T11]
gi|257420537|ref|ZP_05597527.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|293384319|ref|ZP_06630204.1| putative permease [Enterococcus faecalis R712]
gi|293388444|ref|ZP_06632952.1| putative permease [Enterococcus faecalis S613]
gi|294780062|ref|ZP_06745439.1| efflux ABC transporter, permease protein [Enterococcus faecalis
PC1.1]
gi|307268452|ref|ZP_07549830.1| efflux ABC transporter, permease protein [Enterococcus faecalis
TX4248]
gi|307274305|ref|ZP_07555505.1| efflux ABC transporter, permease protein [Enterococcus faecalis
TX0855]
gi|307274389|ref|ZP_07555573.1| efflux ABC transporter, permease protein [Enterococcus faecalis
TX2134]
gi|307278129|ref|ZP_07559211.1| efflux ABC transporter, permease protein [Enterococcus faecalis
TX0860]
gi|307287329|ref|ZP_07567393.1| efflux ABC transporter, permease protein [Enterococcus faecalis
TX0109]
gi|312908519|ref|ZP_07767463.1| efflux ABC transporter, permease protein [Enterococcus faecalis
DAPTO 512]
gi|312909010|ref|ZP_07767872.1| efflux ABC transporter, permease protein [Enterococcus faecalis
DAPTO 516]
gi|312951783|ref|ZP_07770675.1| efflux ABC transporter, permease protein [Enterococcus faecalis
TX0102]
gi|255967254|gb|EET97876.1| macrolide transporter [Enterococcus faecalis T2]
gi|256953333|gb|EEU69965.1| permease [Enterococcus faecalis HIP11704]
gi|256986452|gb|EEU73754.1| macrolide transporter [Enterococcus faecalis JH1]
gi|257159672|gb|EEU89632.1| ABC transporter ATP-binding protein [Enterococcus faecalis T11]
gi|257162361|gb|EEU92321.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|291078311|gb|EFE15675.1| putative permease [Enterococcus faecalis R712]
gi|291082219|gb|EFE19182.1| putative permease [Enterococcus faecalis S613]
gi|294452868|gb|EFG21293.1| efflux ABC transporter, permease protein [Enterococcus faecalis
PC1.1]
gi|306501662|gb|EFM70956.1| efflux ABC transporter, permease protein [Enterococcus faecalis
TX0109]
gi|306505118|gb|EFM74306.1| efflux ABC transporter, permease protein [Enterococcus faecalis
TX0860]
gi|306508899|gb|EFM77985.1| efflux ABC transporter, permease protein [Enterococcus faecalis
TX2134]
gi|306509029|gb|EFM78099.1| efflux ABC transporter, permease protein [Enterococcus faecalis
TX0855]
gi|306515259|gb|EFM83796.1| efflux ABC transporter, permease protein [Enterococcus faecalis
TX4248]
gi|310625486|gb|EFQ08769.1| efflux ABC transporter, permease protein [Enterococcus faecalis
DAPTO 512]
gi|310630271|gb|EFQ13554.1| efflux ABC transporter, permease protein [Enterococcus faecalis
TX0102]
gi|311290710|gb|EFQ69266.1| efflux ABC transporter, permease protein [Enterococcus faecalis
DAPTO 516]
gi|315148936|gb|EFT92952.1| efflux ABC transporter, permease protein [Enterococcus faecalis
TX4244]
gi|315153367|gb|EFT97383.1| efflux ABC transporter, permease protein [Enterococcus faecalis
TX0031]
gi|315154804|gb|EFT98820.1| efflux ABC transporter, permease protein [Enterococcus faecalis
TX0043]
gi|315160047|gb|EFU04064.1| efflux ABC transporter, permease protein [Enterococcus faecalis
TX0312]
gi|315166049|gb|EFU10066.1| efflux ABC transporter, permease protein [Enterococcus faecalis
TX1302]
gi|323478929|gb|ADX78368.1| permease family protein [Enterococcus faecalis 62]
Length = 402
Score = 56.7 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 36/257 (14%), Positives = 84/257 (32%), Gaps = 15/257 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ A+R + N++ S ++ +G++IG+ ++I ++++ NGF+EDM+ ++
Sbjct: 1 MKRSIIWKTAFRSILKNKRR------SLLTMLGIVIGIASVITIVAIGNGFKEDMVDKLS 54
Query: 63 GINGHVV--------IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
F N L + V V Q V G G
Sbjct: 55 AEKQKENVKKISFSAYNTSDMFSDQAMFTDNDLGVVRMVPGVEKIDFDQREVDGAQKGTL 114
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ S L + ++ G + K + + ++ + +
Sbjct: 115 NFQAGPKNLSVTYELADKTTKELLAGRQLN-DGDNAKLDKTVVVDELVAKELYQDPTAAV 173
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
P + + P D+ ++Y + + YF S +++ V
Sbjct: 174 NRTFPYKEQLFTIVGVTTNTSGAIGPGNDDSLLYFPKKTYEHYFGKLKDTSTLKLTVAPG 233
Query: 235 DAIEKTHENIVRILGNG 251
++ + ++ L
Sbjct: 234 YQPDQVLKETIKTLSQQ 250
>gi|300860139|ref|ZP_07106226.1| efflux ABC transporter, permease protein [Enterococcus faecalis
TUSoD Ef11]
gi|300849178|gb|EFK76928.1| efflux ABC transporter, permease protein [Enterococcus faecalis
TUSoD Ef11]
Length = 402
Score = 56.3 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 37/257 (14%), Positives = 84/257 (32%), Gaps = 15/257 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ A+R + N++ S ++ +G++IG+ ++I ++++ NGF+EDM+ ++
Sbjct: 1 MKRSIIWKTAFRSILKNKRR------SLLTMLGIVIGIASVITIVAIGNGFKEDMVDKLS 54
Query: 63 GINGHVV--------IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
F N L + V V Q V G G
Sbjct: 55 AEKQKENVKKISFSAYNTSDMFSDQAMFTDNDLGVVRMVPGVEKIDFDQREVDGAQKGTL 114
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ S L N ++ G + K + + ++ + +
Sbjct: 115 NFQAGPKNLSVTYELANKTTKELLAGRQLN-DGDNAKLDKTVVVDELVAKELYQDPTAAV 173
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
P + + P D+ ++Y + + YF S +++ V
Sbjct: 174 NRTFPYKEQLFTIVGVTTNTSGAIGPGNDDSLLYFPKKTYEHYFGKLKDTSTLKLTVAPG 233
Query: 235 DAIEKTHENIVRILGNG 251
++ + ++ L
Sbjct: 234 YQSDQVLKETIKTLSQQ 250
>gi|330836509|ref|YP_004411150.1| hypothetical protein Spico_0540 [Spirochaeta coccoides DSM 17374]
gi|329748412|gb|AEC01768.1| protein of unknown function DUF214 [Spirochaeta coccoides DSM
17374]
Length = 412
Score = 56.3 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 44/260 (16%), Positives = 95/260 (36%), Gaps = 6/260 (2%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+ WRY FS + + + + G+ + AL++V++ M+ + + ++ + +
Sbjct: 6 ITWRYAFSRQNRH--RVTAVLLAFGICCAMTALVLVLAFMDQLQMMRFDDIKILDSYSLH 63
Query: 71 QQKYYPLVDYQFIA-NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
D A + L I V K + F A GG + +R + F+Y
Sbjct: 64 VVPDDTSRDGAMNALSMLSEIEGVTKGILFSEIPAIAYTGDGGGRLMRIRALDEMGFAYT 123
Query: 130 QN-SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
QN Y D I+ G ++ ++ R +
Sbjct: 124 QNGKSMEIYAGAQPAADASIPEILVSWEQLQNVAMGGTQVMRVTVLARGRTSAAVPRDFT 183
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
G+F P++++ +++MSL+ + ++ I + V + + + +R L
Sbjct: 184 VRPSGIFSSALPEFNSSVMFMSLESLLAL--VPSSSVRIGLVVDETKVTSQAMASSIRAL 241
Query: 249 GNGVVVIDWQQRYQIFFSCY 268
V+ WQ++Y +
Sbjct: 242 HPSWQVMTWQEQYASLYGAM 261
>gi|257080604|ref|ZP_05574965.1| macrolide transporter [Enterococcus faecalis E1Sol]
gi|256988634|gb|EEU75936.1| macrolide transporter [Enterococcus faecalis E1Sol]
Length = 402
Score = 56.3 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/257 (13%), Positives = 84/257 (32%), Gaps = 15/257 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ A+R + N++ S ++ +G++IG+ ++I ++++ NGF+EDM+ ++
Sbjct: 1 MKRSIIWKTAFRSILKNKRR------SLLTMLGIVIGIASVITIVAIGNGFKEDMVDKLS 54
Query: 63 GINGHVV--------IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
F N L + V V Q V G G
Sbjct: 55 AEKQKENVKKISFSAYNTSDMFSDQAMFTDNDLGVVRMVPGVEKIDFDQREVDGAQKGTL 114
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ S L + ++ G + K + + ++ + +
Sbjct: 115 NFQAGPKNLSVTYELADKTTKELLAGRQLN-DGDNAKLDKTVVVDELVAKELYQDPTAAV 173
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
P + + P ++ ++Y + + YF S +++ V
Sbjct: 174 NRTFPYKEQLFTIVGVTTNTSGAIGPGNNDSLLYFPKKTYEHYFGKLKDTSTLKLTVAPG 233
Query: 235 DAIEKTHENIVRILGNG 251
++ + ++ L
Sbjct: 234 YQPDQVLKETIKTLSQQ 250
>gi|87307060|ref|ZP_01089206.1| probable lipoprotein releasing system transmembrane protein LolC
[Blastopirellula marina DSM 3645]
gi|87290433|gb|EAQ82321.1| probable lipoprotein releasing system transmembrane protein LolC
[Blastopirellula marina DSM 3645]
Length = 586
Score = 56.3 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 7/112 (6%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+++I+ RYL + + S I V +GV +IVV SVM+GF +M R+ GI
Sbjct: 20 YKLILCLRYLRTR-------YIALASIISVTLGVATMIVVNSVMSGFAHEMHSRLHGILS 72
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
+V++ + + + LS +
Sbjct: 73 DIVMESHSLNGFYHWEDELAKVKEVAGDDIQDVTVTVHVPAMLSMKIRDQWM 124
Score = 52.8 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 32/89 (35%), Gaps = 8/89 (8%)
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-----ENAVSGIEVFVKDPDAIEKTHEN 243
+TV + + +YD +M L + Q + A+S I++ +K+ + + +
Sbjct: 350 FTVTDFYESKMSEYDAAFAFMPLDQLQRLRGMIHPEHGTAISSIQIKLKEGVNLREATDK 409
Query: 244 IVRILGN---GVVVIDWQQRYQIFFSCYE 269
+ + W+ S E
Sbjct: 410 LRAAFPPATSPYRIQSWRDLQGPLLSAVE 438
>gi|315169187|gb|EFU13204.1| efflux ABC transporter, permease protein [Enterococcus faecalis
TX1341]
Length = 402
Score = 56.3 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 37/257 (14%), Positives = 84/257 (32%), Gaps = 15/257 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ A+R + N++ S ++ +G++IG+ ++I ++++ NGF+EDM+ ++
Sbjct: 1 MKRSIIWKTAFRSILKNKRR------SLLTMLGIVIGIASVITIVAIGNGFKEDMVDKLS 54
Query: 63 GINGHVV--------IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
F N L + V V Q V G G
Sbjct: 55 AEKQKENVKKISFSAYNTSDMFSDQAMFTDNDLGVVRMVPGVEKIDFDQREVDGAQKGTL 114
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ S L N ++ G + K + + ++ + +
Sbjct: 115 NFQAGPKNLSVTYELANKTTKELLAGRQLN-DGDNAKLDKTVVVDELVAKELYQDPTAAV 173
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
P + + P D+ ++Y + + YF S +++ V
Sbjct: 174 NRTFPYKEQLFTIVGVTTNTSGAIGPGNDDSLLYFPKKTYEHYFGKLKDTSTLKLTVAPG 233
Query: 235 DAIEKTHENIVRILGNG 251
++ + ++ L
Sbjct: 234 YQPDQVLKETIKTLSQQ 250
>gi|256960346|ref|ZP_05564517.1| permease [Enterococcus faecalis Merz96]
gi|256950842|gb|EEU67474.1| permease [Enterococcus faecalis Merz96]
Length = 402
Score = 56.3 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 36/257 (14%), Positives = 84/257 (32%), Gaps = 15/257 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ A+R + N++ S ++ +G++IG+ ++I ++++ NGF+EDM+ ++
Sbjct: 1 MKRSIIWKTAFRSILKNKRR------SLLTMLGIVIGIASVITIVAIGNGFKEDMVDKLS 54
Query: 63 GINGHVV--------IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
F N L + V V Q V G G
Sbjct: 55 AEKQKENVKKISFSAYNTSDMFSDQAMFTDNDLGVVRMVPGVEKIDFDQREVDGAQKGTL 114
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ S L + ++ G + K + + ++ + +
Sbjct: 115 NFQAGPKNLSVTYELADKTTKELLAGRQLN-DGDNAKLDKTVVVDELVAKELYQDPTAAV 173
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
P + + P D+ ++Y + + YF S +++ V
Sbjct: 174 NRTFPYKEQLFTIVGVTTNTSGAIGPGNDDSLLYFPKKTYEHYFGKLKDTSTLKLTVAPG 233
Query: 235 DAIEKTHENIVRILGNG 251
++ + ++ L
Sbjct: 234 YQPDQVLKETIKTLSQQ 250
>gi|256618249|ref|ZP_05475095.1| macrolide transporter [Enterococcus faecalis ATCC 4200]
gi|307289729|ref|ZP_07569667.1| efflux ABC transporter, permease protein [Enterococcus faecalis
TX0411]
gi|256597776|gb|EEU16952.1| macrolide transporter [Enterococcus faecalis ATCC 4200]
gi|306499185|gb|EFM68662.1| efflux ABC transporter, permease protein [Enterococcus faecalis
TX0411]
gi|315033668|gb|EFT45600.1| efflux ABC transporter, permease protein [Enterococcus faecalis
TX0017]
gi|315171568|gb|EFU15585.1| efflux ABC transporter, permease protein [Enterococcus faecalis
TX1342]
gi|327536120|gb|AEA94954.1| permease protein [Enterococcus faecalis OG1RF]
Length = 402
Score = 56.3 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 37/257 (14%), Positives = 84/257 (32%), Gaps = 15/257 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ A+R + N++ S ++ +G++IG+ ++I ++++ NGF+EDM+ ++
Sbjct: 1 MKRSIIWKTAFRSILKNKRR------SLLTMLGIVIGIASVITIVAIGNGFKEDMVDKLS 54
Query: 63 GINGHVV--------IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
F N L + V V Q V G G
Sbjct: 55 AEKQKENVKKISFSAYNTSDMFSDQAMFTDNDLGVVRMVPGVEKIDFDQREVDGAQKGTL 114
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ S L N ++ G + K + + ++ + +
Sbjct: 115 NFQAGPKNLSVTYELANKTTKELLAGRQLN-DGDNAKLDKTVVVDELVAKELYQDPTAAV 173
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
P + + P D+ ++Y + + YF S +++ V
Sbjct: 174 NRTFPYKEQLFTIVGVTTNTSGAIGPGNDDSLLYFPKKTYEHYFGKLKDTSTLKLTVAPG 233
Query: 235 DAIEKTHENIVRILGNG 251
++ + ++ L
Sbjct: 234 YQPDQVLKETIKTLSQQ 250
>gi|163752795|ref|ZP_02159919.1| putative transmembrane permease [Kordia algicida OT-1]
gi|161326527|gb|EDP97852.1| putative transmembrane permease [Kordia algicida OT-1]
Length = 415
Score = 56.3 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/276 (13%), Positives = 100/276 (36%), Gaps = 13/276 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVV-MSVMNGFREDMIKRV 61
+ +E +A R + + + + +S I + + +++V ++ G ++ + ++V
Sbjct: 1 MNLNYEFFIAKRIIKAKQYKSSVSATIIKIAIAAIAIGIVMMMVAIATGMGLQKTIQEKV 60
Query: 62 LGINGHVVIQQKYYPL--------VDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGG 113
NGH+ I Q + V + + + +
Sbjct: 61 AAFNGHIQISNFDNNDSEVSLTPVDSNQEFYPDFTQVSGVNHIQAVATKAGIIRTEKTFE 120
Query: 114 SGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSP 173
+ ++ ++ ++ ++ + V+I LAR L + +GD L
Sbjct: 121 GVLAKGVGTDYQWTAFEDFLKEGRFPNVSEKRENREVLISAYLARRLELKLGDTFKTLFL 180
Query: 174 YGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVK 232
+ +++ ++G++ F +D ++ + ++ Q +N V EVF+
Sbjct: 181 KENT---SEIPNERTFEIVGIYDSGFQKFDANVLLVDIRHIQRMNKWKNGEVGNFEVFID 237
Query: 233 DPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
D DAI+ + I ++ + ++ F
Sbjct: 238 DFDAIQAKDDEIYNVIPPNLDTQSIISKFPFIFEWI 273
>gi|315026861|gb|EFT38793.1| efflux ABC transporter, permease protein [Enterococcus faecalis
TX2137]
Length = 402
Score = 56.3 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 37/257 (14%), Positives = 84/257 (32%), Gaps = 15/257 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ A+R + N++ S ++ +G++IG+ ++I ++++ NGF+EDM+ ++
Sbjct: 1 MKRSIIWKTAFRSILKNKRR------SLLTMLGIVIGIASVITIVAIGNGFKEDMVDKLS 54
Query: 63 GINGHVV--------IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
F N L + V V Q V G G
Sbjct: 55 AEKQKENVKKISFSAYNTSDMFSDQAMFTDNDLGVVRMVPGVEKIDFDQREVDGAQKGTL 114
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ S L N ++ G + K + + ++ + +
Sbjct: 115 NFQAGPKNLSVTYELANKTTKELLAGRQLN-DGDNAKLDKTVVVDELVAKELYQDPTAAV 173
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
P + + P D+ ++Y + + YF S +++ V
Sbjct: 174 NRTFPYKNQLFTIVGVTTNTSGAIGPGNDDSLLYFPKKTYEHYFGKLKDTSTLKLTVAPG 233
Query: 235 DAIEKTHENIVRILGNG 251
++ + ++ L
Sbjct: 234 YQPDQVLKETIKTLSQQ 250
>gi|310822517|ref|YP_003954875.1| ABC transporter permease [Stigmatella aurantiaca DW4/3-1]
gi|309395589|gb|ADO73048.1| ABC transporter, permease protein [Stigmatella aurantiaca DW4/3-1]
Length = 433
Score = 56.3 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/243 (14%), Positives = 81/243 (33%), Gaps = 9/243 (3%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
++A+R L ++R+ + + GV LI++M V NG R M++ +
Sbjct: 5 FLIAFRNLLAHRRRTLLL---GSAIAGVT---ALLIILMGVTNGMRATMLESATTLMSGH 58
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
V +Y + Q A +++ + + V +VS G + ++ S
Sbjct: 59 VNVGGFYKVTSGQAAAVVVNYPKIIDLIQKEVPELDYVSQRGRGWAKIVSDTGSMQVGVG 118
Query: 129 LQNSFSRFYGNVSNDFDRGKGVII--GKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ GK + + + ++ + P G +
Sbjct: 119 GIDVEKEQGFRKILQIRSGKLDDLREPGTILIFEEQAKKLEVRVGDEVTLSAPTLRGTNN 178
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSG-IEVFVKDPDAIEKTHENIV 245
+ + ++ + Q + L++ +G I +++KD I + +
Sbjct: 179 TLDVRVVAIAANVGMMSSFNTFVPSKSLQDLYQLKSDTTGAIFLYLKDMKDIPAVQQRLR 238
Query: 246 RIL 248
L
Sbjct: 239 EKL 241
>gi|261855393|ref|YP_003262676.1| hypothetical protein Hneap_0780 [Halothiobacillus neapolitanus c2]
gi|261835862|gb|ACX95629.1| protein of unknown function DUF214 [Halothiobacillus neapolitanus
c2]
Length = 401
Score = 56.3 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 37/243 (15%), Positives = 83/243 (34%), Gaps = 9/243 (3%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
++A R + N +F ++ +G++IGV A+IV++++ G + +++ + ++
Sbjct: 6 FLLALREIRRNVMRSF------LTILGIVIGVAAVIVMVTLGGGATAKVSEQIASLGSNL 59
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+I + Q + D + V G A V+ SS V+ + S
Sbjct: 60 LIATPGKRMGPGQISGAPAFKVEDAEAIAREVPGLAAVAPASSRAMTVVYGNQNWSTMVS 119
Query: 129 LQNSFSRFYGNVSND---FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
N + + G + P GD +
Sbjct: 120 GSTDDYFAARNWTIQDGRRFSSSELRSGAAVCIIGATVKSKLFGSQDPIGDRIRLQKMAC 179
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ + + +V + L+ Q V+ I+V + ++ ++I
Sbjct: 180 QVIGVLDAKGQSTMGTDQDDLVLIPLRTFQRRIAGNQDVNIIQVSADKGVSTDRVKQDIE 239
Query: 246 RIL 248
+IL
Sbjct: 240 QIL 242
>gi|257083335|ref|ZP_05577696.1| transmembrane ATP-binding ABC transporter [Enterococcus faecalis
Fly1]
gi|256991365|gb|EEU78667.1| transmembrane ATP-binding ABC transporter [Enterococcus faecalis
Fly1]
Length = 402
Score = 56.3 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 36/257 (14%), Positives = 84/257 (32%), Gaps = 15/257 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ A+R + N++ S ++ +G++IG+ ++I ++++ NGF+EDM+ ++
Sbjct: 1 MKRSIIWKTAFRSILKNKRR------SLLTMLGIVIGIASVITIVAIGNGFKEDMVDKLS 54
Query: 63 GINGHVV--------IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
F N L + V V Q V G G
Sbjct: 55 AEKQKENVKKISFSAYNSSDMFSDQAMFTDNDLGVVRMVPGVEKIDFDQREVDGAQKGTL 114
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ S L + ++ G + K + + ++ + +
Sbjct: 115 NFQAGPKNLSVTYELADKTTKELLAGRQLN-DGDNAKLDKTVVVDELVARELYQDPTAAV 173
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
P + + P D+ ++Y + + YF S +++ V
Sbjct: 174 NRTFPYKDQLFTIVGVTTNTSGAIGPGNDDSLLYFPKKTYEHYFGKLKDTSTLKLTVAPG 233
Query: 235 DAIEKTHENIVRILGNG 251
++ + ++ L
Sbjct: 234 YQPDQVLKETIKTLSQQ 250
>gi|268325322|emb|CBH38910.1| putative ABC transporter, permease protein [uncultured archaeon]
Length = 401
Score = 56.3 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/266 (15%), Positives = 80/266 (30%), Gaps = 6/266 (2%)
Query: 1 MSIFSRF--EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMI 58
M++F F +A + + I + +S I V + V +V + +I
Sbjct: 1 MTMFKNFKVSFFLAHKSIRRGNIGTAILTVTIMSLIFVNL-VFLPSIVSGIGESMNVMLI 59
Query: 59 KRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
N + Q+ + + I +L+ +P V A SG L
Sbjct: 60 DYT-YANILIEPQEDDLYINNVDSIQKKLNSLPGVAGTSAHYISGATFINKDKFVSGALY 118
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
+ + + +++G DLA G ++ GD
Sbjct: 119 SINPTD-EVTVTKTHTGIIEGEYLSEADTDEILLGIDLAGEEGKEAEERDLGGVRVGDKI 177
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+ + +G +M+ +E + L+N S I V + E
Sbjct: 178 KVTFSNGVIKKYRVKGIFKTKSFVADGSAFMTEKEMESVLGLDNKASEILVKLNQRGTEE 237
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIF 264
+ + LG + W+ +
Sbjct: 238 AFKKKFME-LGISEDIKTWEDKAGGI 262
>gi|257417132|ref|ZP_05594126.1| FtsX family protein [Enterococcus faecalis AR01/DG]
gi|257158960|gb|EEU88920.1| FtsX family protein [Enterococcus faecalis ARO1/DG]
Length = 402
Score = 56.3 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 37/257 (14%), Positives = 84/257 (32%), Gaps = 15/257 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ A+R + N++ S ++ +G++IG+ ++I ++++ NGF+EDM+ ++
Sbjct: 1 MKRSIIWKTAFRSILKNKRR------SLLTMLGIVIGIASVITIVAIGNGFKEDMVDKLS 54
Query: 63 GINGHVV--------IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
F N L + V V Q V G G
Sbjct: 55 AEKQKENVKKISFSAYNTSDMFSDQAMFTDNDLGVVRMVPGVEKIDFDQREVDGAQKGTL 114
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ S L N ++ G + K + + ++ + +
Sbjct: 115 NFQAGPKNLSVTYELANKTTKELLAGRQLN-DGDNAKLDKTVVVDELVAKELYQDPTAAV 173
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
P + + P D+ ++Y + + YF S +++ V
Sbjct: 174 NRTFPYKDQLFTIVGVTTNTSGAIGPGNDDSLLYFPKKTYEHYFGKLKDTSTLKLTVAPG 233
Query: 235 DAIEKTHENIVRILGNG 251
++ + ++ L
Sbjct: 234 YQPDQVLKETIKTLSQQ 250
>gi|159904646|ref|YP_001548308.1| hypothetical protein MmarC6_0255 [Methanococcus maripaludis C6]
gi|159886139|gb|ABX01076.1| protein of unknown function DUF214 [Methanococcus maripaludis C6]
Length = 397
Score = 56.3 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 39/276 (14%), Positives = 90/276 (32%), Gaps = 19/276 (6%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + A R + + S ++ IG++IG++A++ ++S+ G + + +
Sbjct: 1 MKLNDIVSF--AGRNITQKKTQ------SLLTIIGIVIGILAIVSLISLGYGVQNYITEE 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ V+ + IA +F ++ + V G + GG+ V
Sbjct: 53 ISKAGASVITIYPSQQIT---SIAMSKNFNDRDLRAVENVRGVDVLLSGWFGGTLVTYND 109
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + + KD +
Sbjct: 110 QEYYSSVFATKASIYQIFFTEAYGYELEKGRWMKDSDTYTCVIGNSLSKDTFDREIDLGD 169
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ I K Y V+G+ D+ + + + A F++ + + + V ++D + + K
Sbjct: 170 KIEINDKKYKVVGVLEPLGNPDDDNSIVIPYEAASEVFDVSDEYNILMVKIRDGEDVAKV 229
Query: 241 HENIVRILGN-----GVVVIDWQQRY---QIFFSCY 268
E I + L + V+ +Q F+
Sbjct: 230 AEEIEKELEDSRGDENFSVLTSEQLAESISSIFNVL 265
>gi|257088105|ref|ZP_05582466.1| LOW QUALITY PROTEIN: transmembrane ATP-binding ABC transporter
[Enterococcus faecalis D6]
gi|256996135|gb|EEU83437.1| LOW QUALITY PROTEIN: transmembrane ATP-binding ABC transporter
[Enterococcus faecalis D6]
Length = 411
Score = 55.9 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 37/257 (14%), Positives = 84/257 (32%), Gaps = 15/257 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ A+R + N++ S ++ +G++IG+ ++I ++++ NGF+EDM+ ++
Sbjct: 10 MKRSIIWKTAFRSILKNKRR------SLLTMLGIVIGIASVITIVAIGNGFKEDMVDKLS 63
Query: 63 GINGHVV--------IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
F N L + V V Q V G G
Sbjct: 64 AEKQKENVKKISFSAYNTSDMFSDQAMFTDNDLGVVRMVPGVEKIDFDQREVDGAQKGTL 123
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ S L N ++ G + K + + ++ + +
Sbjct: 124 NFQAGPKNLSVTYELANKTTKELLAGRQLN-DGDNAKLDKTVVVDELVAKELYQDPTAAV 182
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
P + + P D+ ++Y + + YF S +++ V
Sbjct: 183 NRTFPYKNQLFTIVGVTTNTSGAIGPGNDDSLLYFPKKTYEHYFGKLKDTSTLKLTVAPG 242
Query: 235 DAIEKTHENIVRILGNG 251
++ + ++ L
Sbjct: 243 YQPDQVLKETIKTLSQQ 259
>gi|255970807|ref|ZP_05421393.1| predicted protein [Enterococcus faecalis T1]
gi|255961825|gb|EET94301.1| predicted protein [Enterococcus faecalis T1]
Length = 402
Score = 55.9 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 36/257 (14%), Positives = 84/257 (32%), Gaps = 15/257 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ A+R + N++ S ++ +G++IG+ ++I ++++ NGF+EDM+ ++
Sbjct: 1 MKRSIIWKTAFRSILKNKRR------SLLTMLGIVIGIASVITIVAIGNGFKEDMVDKLS 54
Query: 63 GINGHVV--------IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
F N L + V V Q V G G
Sbjct: 55 AEKQKENVKKISFSAYNTSDMFSDQAMFTDNDLGVVRMVSGVEKIDFDQREVDGAQKGTL 114
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ S L + ++ G + K + + ++ + +
Sbjct: 115 NFQAGPKNLSVTYELADKTTKELLAGRQLN-DGDNAKLDKTVVVDELVAKELYQDPTAAV 173
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
P + + P D+ ++Y + + YF S +++ V
Sbjct: 174 NRTFPYKEQLFTIVGVTTNTSGAIGPGNDDSLLYFPKKTYEHYFGKLKDTSTLKLTVAPG 233
Query: 235 DAIEKTHENIVRILGNG 251
++ + ++ L
Sbjct: 234 YQPDQVLKETIKTLSQQ 250
>gi|315145878|gb|EFT89894.1| efflux ABC transporter, permease protein [Enterococcus faecalis
TX2141]
Length = 402
Score = 55.9 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 37/257 (14%), Positives = 84/257 (32%), Gaps = 15/257 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ A+R + N++ S ++ +G++IG+ ++I ++++ NGF+EDM+ ++
Sbjct: 1 MKRSIIWKTAFRSILKNKRR------SLLTMLGIVIGIASVITIVAIGNGFKEDMVDKLS 54
Query: 63 GINGHVV--------IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
F N L + V V Q V G G
Sbjct: 55 AEKQKENVKKISFSAYNTSDMFSDQAMFTDNDLGVVRMVPGVEKIDFDQREVDGAQKGTL 114
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ S L N ++ G + K + + ++ + +
Sbjct: 115 NFQAGPKNLSVTYELANKTTKELLAGRPLK-DGDNAKMDKTVVVDELVAKELYQDPTAAV 173
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
P + + P D+ ++Y + + YF S +++ V
Sbjct: 174 NRTFPYKEQLFTIVGVTTNTSGAIGPGNDDSLLYFPKKTYEHYFGKLKDTSTLKLTVAPG 233
Query: 235 DAIEKTHENIVRILGNG 251
++ + ++ L
Sbjct: 234 YQPDQVLKETIKTLSQQ 250
>gi|320160203|ref|YP_004173427.1| putative ABC transporter permease protein [Anaerolinea thermophila
UNI-1]
gi|319994056|dbj|BAJ62827.1| putative ABC transporter permease protein [Anaerolinea thermophila
UNI-1]
Length = 411
Score = 55.9 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 45/267 (16%), Positives = 96/267 (35%), Gaps = 20/267 (7%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS + +AW+ L +N+ +F ++ +GV+IGV A+I+++++ G + + +
Sbjct: 2 MFSEV-LKIAWQSLMANKLRSF------LTMLGVIIGVAAVIIMVAISAGTEATISEAIN 54
Query: 63 GINGHVVI-------------QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGL 109
G+ ++V Q + Y + + I V V V
Sbjct: 55 GLGSNLVFISSAVSRGGPAGGPQTMRGGLVYDDMTAIRERISGVAGVTVEQQTAVTVKYE 114
Query: 110 SSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN 169
++ V++ G + + + + +R V++ D I
Sbjct: 115 NTSLEDVMLVGATPDFPTVRDVRVAEGRFYNDTELERASKVVVLGKTVAEELFGEADPIG 174
Query: 170 ILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV 229
+ +G+ ++ V G+ + +V+ AQ + + V I V
Sbjct: 175 QTVTVNSIKLTVIGVMAEKGLVAGVDFDQQIYVPITLVFKKFMPAQFARIMGDRVRQIIV 234
Query: 230 FVKDPDAIEKTHENIVRILGNGVVVID 256
V ++K E I +L N V
Sbjct: 235 SVDAHADMDKVIEQITYLLANRHEVTT 261
>gi|312142677|ref|YP_003994123.1| protein of unknown function DUF214 [Halanaerobium sp.
'sapolanicus']
gi|311903328|gb|ADQ13769.1| protein of unknown function DUF214 [Halanaerobium sp.
'sapolanicus']
Length = 422
Score = 55.9 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 42/264 (15%), Positives = 84/264 (31%), Gaps = 27/264 (10%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M I + + VAWR L N+ F+S+ + + VM +I +M GF E +
Sbjct: 1 MRII--YLLKVAWRNLSRNKVRTFVSVLAITAV------VMIVIFARGLMLGFTESNFQT 52
Query: 61 VLGINGHVVIQQKYYPLVDYQF--------------IANRLDFIPDVIKVLPFVSGQAFV 106
+ + V + + + + I + +V + F
Sbjct: 53 YIDNSFGHVRITEEEYQIREALLPLEYTVDGFAGAGKSEMISEIKTLDRVEHVLPRIRFG 112
Query: 107 SGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGD 166
+ S + + G+ + + + + + +G L L +GD
Sbjct: 113 AMASIDDRLIRMSGVGIDTAAENEYGALKADLKEGRMPESDNEIYVGSGLMEKLNADLGD 172
Query: 167 KINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSG 226
++ + G + D+ Y+ L AQ +EN +
Sbjct: 173 RVTFSFADAYQSLRGRSFKIVGVRE-----SGVVQLDDNFFYLPLSTAQDMLWMENEATE 227
Query: 227 IEVFVKDPDAIEKTHENIVRILGN 250
+ VF D E+ +I +L
Sbjct: 228 LLVFAADAQEAERLQTDINTLLSE 251
>gi|197337386|ref|YP_002158406.1| ABC transporter permease protein [Vibrio fischeri MJ11]
gi|197314638|gb|ACH64087.1| ABC transporter permease protein [Vibrio fischeri MJ11]
Length = 422
Score = 55.9 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 43/276 (15%), Positives = 85/276 (30%), Gaps = 25/276 (9%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
+ + +AW L N + S +S + + I V AL + + +
Sbjct: 9 PYSLRLAWLNLLRNGRR------SALSILIITIAVFALTSAGGFGLYTYDSLKESTARDT 62
Query: 66 GHVVIQQKYYPLVDYQFI-----------ANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
GH+ + Q Y D + + +V V P + +S
Sbjct: 63 GHLTLSQPGYFESDEEMPLSNGLSDTSELIRTIMKYDEVRGVQPRIDFTGLISNGVKSTI 122
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ R +++ V+ + + +
Sbjct: 123 FMGTGVNDREFDMKGPFLDMRSGKTLTDITSSRYDVMEPEIMLGVDLARNLNVSVGDWVT 182
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
T + + + V G + P+ D +Y+ + AQ L VS + VF+ D
Sbjct: 183 LLATTSEGALNAFDFKVHGTYSTGVPELDKRQLYIHIDSAQELL-LSEKVSTLSVFLFDT 241
Query: 235 DAIEKTHENIVRI-----LGNGVVVIDWQQRYQIFF 265
+ + H+ + + L V + WQ+R FF
Sbjct: 242 EKTAELHQRLAQELETMPLDYDVEITPWQER--AFF 275
>gi|225163956|ref|ZP_03726246.1| protein of unknown function DUF214 [Opitutaceae bacterium TAV2]
gi|224801449|gb|EEG19755.1| protein of unknown function DUF214 [Opitutaceae bacterium TAV2]
Length = 403
Score = 55.9 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/246 (13%), Positives = 80/246 (32%), Gaps = 13/246 (5%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
++A R L N+ +F ++ +G++IGV A+I ++S+ NG + + +V + +V+
Sbjct: 8 LIALRALRRNKLRSF------LTALGIIIGVAAVIAMVSIGNGAKAQVEAQVASLGRNVI 61
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
V +S + +++ L
Sbjct: 62 TVFPGSVTSAGVRTGWGSASTLTPEDAQAIQREVPGVVSVSPEVRDRQQVLANGLNWNTL 121
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
S + +V + D+ + I + D P+G +R ++
Sbjct: 122 VQGESPDFLSVRAWGMAEGAIFAETDVRSAAKVCIIGSTVAEQLFPDSNPVGQTLRIRNI 181
Query: 190 TV-------LGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + + ++ + + + +S I V + + E
Sbjct: 182 PMRILGVLESKGYNAMMNQDQDDIIIVPYTTSMRRISRRTYLSSILVEAASAEQMPIIQE 241
Query: 243 NIVRIL 248
+I +L
Sbjct: 242 DITALL 247
>gi|229894472|ref|ZP_04509654.1| lipoprotein releasing system transmembrane protein LolC [Yersinia
pestis Pestoides A]
gi|229703491|gb|EEO90508.1| lipoprotein releasing system transmembrane protein LolC [Yersinia
pestis Pestoides A]
Length = 299
Score = 55.9 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 47/122 (38%), Gaps = 4/122 (3%)
Query: 148 KGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMV 207
+I+G+ LA LG+ G+ + ++ P I S+ + + D +
Sbjct: 42 YNIILGEKLAGQLGVKRGETLRLMVPSASQFTPMGRIPSQRVFNIIGTFAANSEVDGYQI 101
Query: 208 YMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFS 266
++ Q+A ++G +F+ P +++ + L G V DW+ R F
Sbjct: 102 LVNQQDASRLMRYPLGNITGWRLFLSQPLSVDSLS---QQSLPEGTVWKDWRDRKGELFQ 158
Query: 267 CY 268
Sbjct: 159 AV 160
>gi|295114330|emb|CBL32967.1| ABC-type antimicrobial peptide transport system, permease component
[Enterococcus sp. 7L76]
Length = 402
Score = 55.9 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 37/257 (14%), Positives = 84/257 (32%), Gaps = 15/257 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ A+R + N++ S ++ +G++IG+ ++I ++++ NGF+EDM+ ++
Sbjct: 1 MKRSIIWKTAFRSILKNKRR------SLLTMLGIVIGIASVITIVAIGNGFKEDMVDKLS 54
Query: 63 GINGHVV--------IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
F N L + V V Q V G G
Sbjct: 55 AEKQKENVKKISFSAYNTSDMFSDQAMFTDNDLGVVRMVPGVEKIDFDQREVDGAQKGTL 114
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ S L N ++ G + K + + ++ + +
Sbjct: 115 NFQAGPKNLSVTYELANKTTKELLAGRQLN-DGDNAKMDKTVVVDELVAKELYQDPTAAV 173
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
P + + P D+ ++Y + + YF S +++ V
Sbjct: 174 NRTFPYKEQLFTIVGVTTNTSGAIGPGNDDSLLYFPKKTYEHYFGKLKDTSTLKLTVAPG 233
Query: 235 DAIEKTHENIVRILGNG 251
++ + ++ L
Sbjct: 234 YQPDQVLKETIKTLSQQ 250
>gi|229546287|ref|ZP_04435012.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Enterococcus faecalis TX1322]
gi|256854659|ref|ZP_05560023.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|229308604|gb|EEN74591.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Enterococcus faecalis TX1322]
gi|256710219|gb|EEU25263.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|315030656|gb|EFT42588.1| efflux ABC transporter, permease protein [Enterococcus faecalis
TX4000]
Length = 402
Score = 55.9 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 35/257 (13%), Positives = 83/257 (32%), Gaps = 15/257 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ A+R + N++ S ++ +G++IG+ ++I ++++ NGF+EDM+ ++
Sbjct: 1 MKRSIIWKTAFRSILKNKRR------SLLTMLGIVIGIASVITIVAIGNGFKEDMVDKLS 54
Query: 63 GINGHVV--------IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
F N L + V V Q V G G
Sbjct: 55 AEKQKENVKKISFSAYNTSDMFSDQAMFTDNDLGVVRMVPGVEKIDFDQREVDGAQKGTL 114
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ S L + ++ G + K + + ++ + +
Sbjct: 115 NFQAGPKNLSVTYELADKTTKELLAGRQLN-DGDNAKLDKTVVVDELVAKELYQDPTAAV 173
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
P + + D+ ++Y + + YF S +++ V
Sbjct: 174 NRTFPYKEQLFTIVGVTTNTSGAIGLGNDDSLLYFPKKTYEHYFGKLKDTSTLKLTVAPG 233
Query: 235 DAIEKTHENIVRILGNG 251
++ + ++ L
Sbjct: 234 YQPDQVLKETIKTLSQQ 250
>gi|228474038|ref|ZP_04058779.1| putative membrane protein [Capnocytophaga gingivalis ATCC 33624]
gi|228274552|gb|EEK13393.1| putative membrane protein [Capnocytophaga gingivalis ATCC 33624]
Length = 416
Score = 55.9 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 45/280 (16%), Positives = 101/280 (36%), Gaps = 17/280 (6%)
Query: 5 SRFEVIVAWRYLF-SNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
E +A R + S K++ S I+ + +GV+ +++ ++ G +E + +++
Sbjct: 1 MNIEFFIARRLVHNSGGKSSISSPIIKIAISAIALGVVMILIAIATGRGLQERIRQKIAS 60
Query: 64 INGHVVIQQKY------------YPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSS 111
+NGH+ I Y V+ + ++ + +
Sbjct: 61 LNGHIQIFNYDTNRSEVSIVPISNQEDFYTDPQFFNREGKKVLHLQGVITKGGIIRTEKT 120
Query: 112 GGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL 171
+ + D Y++ + V+I + LA L +S+GD N L
Sbjct: 121 FEGIIAKGVGKDFDAQYMKAYLKAGKFPDFSSDTLSNEVLISEYLANRLELSVGDTCNTL 180
Query: 172 SPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLENAVSGIEVF 230
+ +++T+ G++ F +D + + +++ Q V EVF
Sbjct: 181 FLREESE---GIPNQRNFTIAGIYASGFQQFDATYILVDIRQLQKINKWTPQQVGLFEVF 237
Query: 231 VKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+KD D ++ E + + Q+Y F + +
Sbjct: 238 IKDFDQMDSVGEYVYNHIPTTYDSQTIAQKYPTIFEWFHT 277
>gi|213418899|ref|ZP_03351965.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Typhi str.
E01-6750]
Length = 266
Score = 55.9 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 4/127 (3%)
Query: 143 DFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDY 202
VI+G+ LA LG++ GD+I ++ P + S+ + +
Sbjct: 4 LQPGKYNVILGEQLAGQLGVNRGDQIRLMVPSASQFTPMGRLPSQRLFTVIGTFAANSEV 63
Query: 203 DNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRY 261
D + +++Q+A ++G +++ +P ++ + L G DW++R
Sbjct: 64 DGYEMLVNIQDASRLMRYPAGNITGWRLWLDEPLQVDTLS---QQTLPQGTKWQDWRERK 120
Query: 262 QIFFSCY 268
F
Sbjct: 121 GELFQAV 127
>gi|313893613|ref|ZP_07827182.1| macrolide export ATP-binding/permease protein MacB [Veillonella sp.
oral taxon 158 str. F0412]
gi|313441884|gb|EFR60307.1| macrolide export ATP-binding/permease protein MacB [Veillonella sp.
oral taxon 158 str. F0412]
Length = 403
Score = 55.9 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 42/259 (16%), Positives = 101/259 (38%), Gaps = 13/259 (5%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ ++AW L +N+ S ++ +G++IGV A+I ++S+ NG ++D+ +
Sbjct: 1 MYKESFLMAWASLIANKMR------SILTMLGIIIGVAAVIALVSIGNGVKQDIQNSISS 54
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ ++++ P + V + G +V +
Sbjct: 55 LGSNLLMVMPGAPRTPGVRPSPGSMKSLKVADYEAIAKLDGVKAASPMTNGGYVVIYQNK 114
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + + Y +V+N + + K++ +++ K + + +GD P+G
Sbjct: 115 NWTTSVSG-VNANYLDVNNWTMKSGRFLSEKNVQNRERVAVVGKTVVKNLFGDEDPVGKE 173
Query: 184 IRSKSYTVLGMFRMR------FPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
IR K+ + + + + MV + A + + + I V KD + I
Sbjct: 174 IRVKNIPFRIIGVLNSKGSGAMGNDQDDMVIIPYTTAMERVDGIDYLRMIYVVGKDENGI 233
Query: 238 EKTHENIVRILGNGVVVID 256
++ +I +L + D
Sbjct: 234 DRLQSDIENLLRVRHGIKD 252
>gi|320530699|ref|ZP_08031743.1| efflux ABC transporter, permease protein [Selenomonas artemidis
F0399]
gi|320136986|gb|EFW28924.1| efflux ABC transporter, permease protein [Selenomonas artemidis
F0399]
Length = 405
Score = 55.9 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 33/260 (12%), Positives = 78/260 (30%), Gaps = 12/260 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +A L +N+ S ++ +G++IGV A+I ++S+ G R +
Sbjct: 1 MLFKECFAMALNALLANKLR------SLLTMLGIIIGVGAVIAMVSIGMGVRTSVTNSFA 54
Query: 63 GINGHVVIQQKYYPLVDYQFIA----NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
+ +++I A L + +++ V
Sbjct: 55 SLGTNMLIVMPGSTNKGGIRGAAGSRKSLKYDDAKAIAAKIKGIDYVSPTVNTSYQVVNG 114
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGK--DLARNLGISIGDKINILSPYGD 176
N++ + + + + K +A + +P G
Sbjct: 115 NLNWNTEVMGVTPELMQIRSLKVENGSFITASDLSKRSRVAVIGATVAANLFGAENPVGQ 174
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
+ + + + ++Y+ L AQ V I + V DP
Sbjct: 175 NIRINNQPFKVIGLIASKGQSSMGQDQDDVIYIPLTTAQERMLAITHVQSINIQVSDPAR 234
Query: 237 IEKTHENIVRILGNGVVVID 256
+++ I +L +
Sbjct: 235 MDQVQSEIETLLRARHHIRT 254
>gi|256761180|ref|ZP_05501760.1| macrolide transporter [Enterococcus faecalis T3]
gi|256682431|gb|EEU22126.1| macrolide transporter [Enterococcus faecalis T3]
Length = 402
Score = 55.9 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 37/257 (14%), Positives = 84/257 (32%), Gaps = 15/257 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ A+R + N++ S ++ +G++IG+ ++I ++++ NGF+EDM+ ++
Sbjct: 1 MKRSIIWKTAFRSILKNKRR------SLLTMLGIVIGIASVITIVAIGNGFKEDMVDKLS 54
Query: 63 GINGHVV--------IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
F N L + V V Q V G G
Sbjct: 55 AEKQKENVKKISFSAYNTSDMFSDQAMFTDNDLGVVRMVPGVEKIDFDQREVDGAQKGTL 114
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ S L N ++ G + K + + ++ + +
Sbjct: 115 NFQAGPKNLSVTYELANKTTKELLAGRQLN-DGDNAKMDKTVVVDELVAKELYQDPTAAV 173
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
P + + P D+ ++Y + + YF S +++ V
Sbjct: 174 NRTFPYKEQLFTIVGVTTNTSGAIGPGNDDSLLYFPKKTYEHYFGKLKDTSTLKLTVAPG 233
Query: 235 DAIEKTHENIVRILGNG 251
++ + ++ L
Sbjct: 234 YQPDQVLKETIKTLSQQ 250
>gi|312144670|ref|YP_003996116.1| protein of unknown function DUF214 [Halanaerobium sp.
'sapolanicus']
gi|311905321|gb|ADQ15762.1| protein of unknown function DUF214 [Halanaerobium sp.
'sapolanicus']
Length = 411
Score = 55.9 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 33/272 (12%), Positives = 79/272 (29%), Gaps = 14/272 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGF-REDMIKRV 61
+F + R L +++ I+ + + ++ I++ +M G +
Sbjct: 1 MFLP---KLVIRNLSRHKRR------VLITALIIAFAILIYILIEGLMMGLTEISFSNII 51
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLD----FIPDVIKVLPFVSGQAFVSGLSSGGSGVL 117
+GH+ I + Y + L I + IK ++ S + +
Sbjct: 52 NLESGHLQITDQNYFADRDELPLKNLITPDGEIENKIKATAGLNAYTKRLDFSVNLNNGI 111
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
+ F R + + + D +
Sbjct: 112 DELPVKGVGIDPASDPEVFELEKHLIQGRMPNAGSREIIMGAKLAELMDFEIGDYGIMLI 171
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
+ ++G+F P ++ V++ L AQ N+ + +S + ++D
Sbjct: 172 RTEEQTFNTIDGQIVGLFNTPHPSLNDSSVFIPLSTAQESLNVGDKISHYVLRMEDRQLG 231
Query: 238 EKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
E + L + W+ + E
Sbjct: 232 ITAAEELNSELNYPLAAYSWRSTSENLIYMLE 263
>gi|313113647|ref|ZP_07799228.1| efflux ABC transporter, permease protein [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310624015|gb|EFQ07389.1| efflux ABC transporter, permease protein [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 401
Score = 55.5 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 34/260 (13%), Positives = 77/260 (29%), Gaps = 16/260 (6%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A + ++SN+ F ++ +G++IGVMA+IV++ + NG + M + + +
Sbjct: 9 AIQNVWSNKLRTF------LTMLGIIIGVMAVIVIVGLGNGMTKSMRDSFSALGTNTLSV 62
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
Q + + + +++ +S Q SG + G SN
Sbjct: 63 QVWGNGSRTVSVEEMYKLPTEYPELIQSISPQIDFSGSGTLKIGTTSYRWSNISGVDENY 122
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTV 191
S + Y + + K + + R
Sbjct: 123 SAMKNYQIAQGRGLQYMDMKDNKHVCVIGDYLNRVAFGGNGLGQTLKIGANKFRIVGVLA 182
Query: 192 LGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL--- 248
+ + + + ++ V+ ++D + + L
Sbjct: 183 AKVSDPDMQQGSDDDCVYLPYTTAMRLSSQSTVNNYAAVMEDESRANEAKSAVESELQRL 242
Query: 249 ---GNGVVVID---W-QQRY 261
NG V W ++
Sbjct: 243 LGSDNGYYVYSASEWLEEMN 262
>gi|124010218|ref|ZP_01694873.1| efflux ABC transporter, permease protein [Microscilla marina ATCC
23134]
gi|123983710|gb|EAY24142.1| efflux ABC transporter, permease protein [Microscilla marina ATCC
23134]
Length = 414
Score = 55.5 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 32/283 (11%), Positives = 83/283 (29%), Gaps = 29/283 (10%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + + + +L S K + ++ + V G+ I + S MNG +
Sbjct: 1 MIRKTNLKIVFAHLTSRVKQ------TMVAILSVTFGISMYIFLNSFMNGVNGTQTELAF 54
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H+ + + I+ + + + + +
Sbjct: 55 STLAHIRVYNDLPEDKSNLLAGSFDQPTAVNIRNARVIQYREGIRNSAKVLHTLAALPDI 114
Query: 123 NSDFSYLQNSFSRFYG--------------------NVSNDFDRGKGVIIGKDLARNLGI 162
+ + + G S +G+ +G +
Sbjct: 115 KTYTPQVNINVFFRNGASQVNGLLSGVEVLSEEALFKPSQYMAKGQWNNLGYRADGIVLG 174
Query: 163 SIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE- 221
K + + V ++SY ++G+ + DN ++ + A+ +
Sbjct: 175 KGLAKKLSVKLHDKVMVATASGITRSYEIIGIIETTLANVDNAKAFIKIGAARQLLSKNA 234
Query: 222 NAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIF 264
V+ I+V + D D + + + ++ V WQ+
Sbjct: 235 GYVTDIQVNIGDFDQARRVADKLSPLV--DFKVEPWQEANGQL 275
>gi|325108691|ref|YP_004269759.1| hypothetical protein Plabr_2134 [Planctomyces brasiliensis DSM
5305]
gi|324968959|gb|ADY59737.1| protein of unknown function DUF214 [Planctomyces brasiliensis DSM
5305]
Length = 537
Score = 55.5 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 7/112 (6%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
++ ++ RYL + + S I VM+GV +IVV SVM+GF M R+ G+
Sbjct: 2 YKYLLCQRYLRTR-------FIALASIISVMLGVATMIVVNSVMSGFSHQMRDRIHGLLA 54
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
VV++ V + R+ ++ L+ +G +
Sbjct: 55 DVVVESHSLDGVTDPDMLMRMAREVSDDQIEAITPTVEVYGMLNFNFAGQWI 106
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/95 (16%), Positives = 38/95 (40%), Gaps = 7/95 (7%)
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL------ENAVSGIEVFVKDPD 235
TV+ +F+ +YD+ +++ +L+E Q + + A++ + + +KD
Sbjct: 295 PEHAPYLATVVDVFKSGMTEYDSNLIFCNLEELQNVRGMISPESGKRAITSLHIKLKDYR 354
Query: 236 AIEKTHENIVRILGNG-VVVIDWQQRYQIFFSCYE 269
E + + V W+Q+ + E
Sbjct: 355 KAGDVVERLKSVFPPDQFAVKTWEQKQGPLLAAVE 389
>gi|300776713|ref|ZP_07086571.1| ABC superfamily ATP binding cassette transporter, permease protein
[Chryseobacterium gleum ATCC 35910]
gi|300502223|gb|EFK33363.1| ABC superfamily ATP binding cassette transporter, permease protein
[Chryseobacterium gleum ATCC 35910]
Length = 409
Score = 55.5 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 40/273 (14%), Positives = 104/273 (38%), Gaps = 14/273 (5%)
Query: 5 SRFEVIVAWRYLFSN-RKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+F + + + FS KN + FI + V +G++ ++ ++ G ++ + +R+
Sbjct: 1 MKFPLYFSRKIAFSKDNKNNLSRVIIFIGRLSVALGIIVSLITVATGFGSKKAIKERLAD 60
Query: 64 INGHVVIQQKYYPLVDYQF-------IANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
+GH+ ++ ++ +PDV + +V+ + + +
Sbjct: 61 FSGHITVRSTRSNSSYNTSVLDNQGLNIAKIKELPDVESIQKYVTVTGIMRNEHNFAGII 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
+ D + + V I + +A +L + + D I + D
Sbjct: 121 FKGIGKDFDSLRFKKFLIAGTTPKVTEKGFNNDVAISQKVANDLHLKVNDSIVTVFLKAD 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPD 235
P + + V+G++R D V + A+ ++ + + GI++F+K+ +
Sbjct: 181 QKP-----LYRKFRVIGIYRTDIKLIDEQFVIGGINHARKIQDMKPDEIGGIDIFLKNVN 235
Query: 236 AIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
I+K +I +++G +++
Sbjct: 236 DIDKDFPDIEKLIGYKNYAEKATEKFPQITDWI 268
>gi|308049251|ref|YP_003912817.1| hypothetical protein Fbal_1539 [Ferrimonas balearica DSM 9799]
gi|307631441|gb|ADN75743.1| protein of unknown function DUF214 [Ferrimonas balearica DSM 9799]
Length = 409
Score = 55.5 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 40/261 (15%), Positives = 85/261 (32%), Gaps = 24/261 (9%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+AWR L+ NR + I ++ G++ +IV++ ++G +MI+ + +
Sbjct: 4 KLAWRNLWRNRLR------TGIMLAAMVFGLLGVIVMIGFISGLYSNMIQNAIAWQTSHL 57
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS------- 122
L + + + + + + L G R
Sbjct: 58 QIHSRNYLDHPDIQDTLANPDAITALLSDSPTVEGWSARLVVDGMVASARSTRGIRINGV 117
Query: 123 -NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ + D + V++ A L + +G K+ + D G
Sbjct: 118 VPEAEASVSPVARHVREGQWLDAEGRNPVVVSVKTAERLRLKLGSKVVLTFTGPDGEVSG 177
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI--EK 239
R + F+ +D+ +++ + L+ V I V +D
Sbjct: 178 AAFRVRGL-----FKSPISAFDDSQLFVRRSDLAALAQLDG-VHEIAVVTEDGAEANGPA 231
Query: 240 THENIVRI--LGNGVVVIDWQ 258
T + I ++ L + V DWQ
Sbjct: 232 TAQLIQQLRTLDDANSVRDWQ 252
>gi|145631789|ref|ZP_01787549.1| ABC-type transport system, involved in lipoprotein release,
permease component [Haemophilus influenzae R3021]
gi|144982579|gb|EDJ90129.1| ABC-type transport system, involved in lipoprotein release,
permease component [Haemophilus influenzae R3021]
Length = 371
Score = 55.5 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 40/224 (17%), Positives = 90/224 (40%), Gaps = 5/224 (2%)
Query: 50 MNGFREDMIKRVLGINGHVV----IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAF 105
MNGF ++ +R+L + H+ Q K + +Q + RL P + + PFVS A
Sbjct: 1 MNGFERELNQRILAVVPHIEIFSAPQAKDPTIHHWQNLEKRLQQNPQIKGISPFVSFTAL 60
Query: 106 VSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIG 165
V S V V+G+ + + + + F + G+++G +A+ L + +G
Sbjct: 61 VENG-SKLKVVQVKGVEKQAEDKVSSIGNFVQEQGWDKFGKEGGLVLGAGIAKELDVKVG 119
Query: 166 DKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVS 225
D I +L + + V + R+ + + Q + ++
Sbjct: 120 DWITLLISQQNGDEQFAQPTREPVQVTAILRLDGQLDYSYALLPLAQAQTFLTYQPDQIT 179
Query: 226 GIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
G+E+ + DP ++ +++ + + +W ++ + +
Sbjct: 180 GVELKLDDPFSVRNLDLSMLNDYPQMLYMQNWISKFGYMYRDIQ 223
>gi|113461085|ref|YP_719153.1| outer membrane-specific lipoprotein transporter subunit LolE
[Haemophilus somnus 129PT]
gi|112823128|gb|ABI25217.1| lipoprotein releasing system, transmembrane protein [Haemophilus
somnus 129PT]
Length = 371
Score = 55.5 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 40/224 (17%), Positives = 82/224 (36%), Gaps = 5/224 (2%)
Query: 50 MNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD---FIPDVIKVLPFVSGQAFV 106
MNGF ++ +R+L + H I ++ + +
Sbjct: 1 MNGFERELNQRILSVVPHSEIISYQEQGNVKIESRQKITALLQQDPNVLAQSPFVEFTAL 60
Query: 107 SGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGD 166
+ VRGI + N + F + G+++G +A+ LG+S D
Sbjct: 61 IENGTKLKVAQVRGIEQVTQDQVSNLSKFVLNDGWQQFQKNGGLVLGYGIAKELGVSEND 120
Query: 167 KINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVS 225
+ +L + + V G+ R D+ MSL +AQ+ + + ++
Sbjct: 121 WVTLLISFANSDNQLSQPLRYRIQVTGILR-LDGQLDHSYALMSLSQAQVLLDYTPDEIT 179
Query: 226 GIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
G+E+ V+DP A+ + + V DW ++ ++ +
Sbjct: 180 GVELKVQDPFAVRNMTYEYLYDYPQRLQVQDWIGKFGYMYNDIQ 223
>gi|193214121|ref|YP_001995320.1| hypothetical protein Ctha_0402 [Chloroherpeton thalassium ATCC
35110]
gi|193087598|gb|ACF12873.1| protein of unknown function DUF214 [Chloroherpeton thalassium ATCC
35110]
Length = 422
Score = 55.5 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 41/291 (14%), Positives = 90/291 (30%), Gaps = 37/291 (12%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +A +L + + + +GV + M LI +S+M G + + ++
Sbjct: 1 MIQTI-FKIAIGHLVGRARQ------TVTTLVGVSVSTMVLITTISLMRGLVDSFTESIV 53
Query: 63 GINGHVV-----------------------IQQKYYPLVDYQFIANRLDFIPDVIKVLPF 99
I H+V D + I N + + +
Sbjct: 54 DIAPHIVVRGESIIPDKIDLISNDKGTRRAFVVDNVQEEDPEEITNYRQILSLMEEAPYD 113
Query: 100 VSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARN 159
+ +SS + + + + + ++ G + K
Sbjct: 114 EAISVASPYVSSQVMAIKGTANQPIEVNGVLIDRENKVAKIESNLKSGSLESLQKTPNGL 173
Query: 160 LGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFN 219
L + + + ++T + + V+G F D +++L+ QL
Sbjct: 174 LLGEKIAEDLEIQLFDELTLVASSGVTVRAKVVGTFFTGVKSID-NKAFVNLKVGQLLEE 232
Query: 220 LE-NAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQI---FFS 266
+ N V+GI + VKD + + R+ G WQ+ F+
Sbjct: 233 MPPNKVTGINLRVKDLLQNTELARELERV--TGYKCETWQEANDSIIGLFN 281
>gi|327541710|gb|EGF28231.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Rhodopirellula baltica WH47]
Length = 532
Score = 55.5 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+ +++ +RYL + + S I V +GV LIVV SVM GF +M +R+ G+
Sbjct: 2 YRLLLCFRYLRTR-------YIALASIISVTLGVATLIVVNSVMAGFSAEMHERLHGLAS 54
Query: 67 HVVIQQK 73
+VI+
Sbjct: 55 DIVIECH 61
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/127 (11%), Positives = 48/127 (37%), Gaps = 14/127 (11%)
Query: 155 DLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEA 214
++ + GD + ++ P P + ++ +TV+ ++ +YD+ ++ L +
Sbjct: 264 NVRDHYYCRPGDDVRLMFPNASDKPK---VVNQKFTVVDLYESGMSEYDSTFAFVRLDQL 320
Query: 215 QLYFNLENAVSG------IEVFVKDPDAIEKTHENIVRILGNG---VVVIDWQQRYQIFF 265
Q + + + +S I++ + + + + + + + W+
Sbjct: 321 QDFRGMIDPISNTTSITTIQLKLIEGADLNAVRDALRQRFPPDTYAYSIQTWRDMQGPLL 380
Query: 266 SC--YES 270
+ E+
Sbjct: 381 AAVRLET 387
>gi|32474517|ref|NP_867511.1| lipoprotein releasing system transmembrane protein LolC
[Rhodopirellula baltica SH 1]
gi|32445056|emb|CAD75058.1| probable lipoprotein releasing system transmembrane protein LolC
[Rhodopirellula baltica SH 1]
Length = 532
Score = 55.5 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+ +++ +RYL + + S I V +GV LIVV SVM GF +M +R+ G+
Sbjct: 2 YRLLLCFRYLRTR-------YIALASIISVTLGVATLIVVNSVMAGFSAEMHERLHGLAS 54
Query: 67 HVVIQQK 73
+VI+
Sbjct: 55 DIVIECH 61
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/127 (11%), Positives = 48/127 (37%), Gaps = 14/127 (11%)
Query: 155 DLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEA 214
++ + GD + ++ P P + ++ +TV+ ++ +YD+ ++ L +
Sbjct: 264 NVRDHYYCRPGDDVRLMFPNASDKPK---VVNQKFTVVDLYESGMSEYDSTFAFVRLDQL 320
Query: 215 QLYFNLENAVSG------IEVFVKDPDAIEKTHENIVRILGNG---VVVIDWQQRYQIFF 265
Q + + + +S I++ + + + + + + + W+
Sbjct: 321 QDFRGMIDPISNTTSITTIQLKLIEGADLNAVRDALRQRFPPDTYAYSIQTWRDMQGPLL 380
Query: 266 SC--YES 270
+ E+
Sbjct: 381 AAVRLET 387
>gi|111114900|ref|YP_709518.1| hypothetical protein BAPKO_0079 [Borrelia afzelii PKo]
gi|216263946|ref|ZP_03435940.1| lipoprotein releasing factor [Borrelia afzelii ACA-1]
gi|110890174|gb|ABH01342.1| hypothetical protein BAPKO_0079 [Borrelia afzelii PKo]
gi|215979990|gb|EEC20812.1| lipoprotein releasing factor [Borrelia afzelii ACA-1]
Length = 417
Score = 55.5 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 37/260 (14%), Positives = 94/260 (36%), Gaps = 8/260 (3%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+ R + + + ++I +S + +G + +I+ +S+MNGF+ D +V
Sbjct: 6 FLLKRLILEEKNSLALTIVIILS---IALGEIIIILTISIMNGFQNDF----FLSITNVE 58
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
Q ++ I + + Q + + + I D
Sbjct: 59 SGNLKIENELTQEELKKIKKIEGINHINKMYETQGIGIQNYYYPTILNIIAIDIQDLKKD 118
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
QN S + + +IIG L+ N + D + ++ + + K++
Sbjct: 119 QNFISFTGLEKAELDLKDNEIIIGNILSYNFNLFENDDLGLIIIDEIKNFISLENDIKNF 178
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
+ +F+ + + +++M++ L N+ ++ + + K E I + +
Sbjct: 179 KIKSIFKSNYAKINETLIFMNIDYFIKNKVLRNSSINYQIKTTNLNPSNKLIEKI-KAIN 237
Query: 250 NGVVVIDWQQRYQIFFSCYE 269
+ V W + + F+ +
Sbjct: 238 PKIKVKTWNEYNKEFYKTLK 257
>gi|329575654|gb|EGG57183.1| hypothetical protein HMPREF9520_01693 [Enterococcus faecalis
TX1467]
Length = 201
Score = 55.5 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 35/60 (58%), Gaps = 6/60 (10%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ A+R + N++ S ++ +G++IG+ ++I ++++ NGF+EDM+ ++
Sbjct: 1 MKRSIIWKTAFRSILKNKRR------SLLTMLGIVIGIASVITIVAIGNGFKEDMVDKLS 54
>gi|283778436|ref|YP_003369191.1| hypothetical protein Psta_0645 [Pirellula staleyi DSM 6068]
gi|283436889|gb|ADB15331.1| protein of unknown function DUF214 [Pirellula staleyi DSM 6068]
Length = 510
Score = 55.5 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
++++++WRYL + + S + V +GV LIVV SVM GF +M R+ GI
Sbjct: 2 YKLLLSWRYLRTR-------WIALASIVSVTLGVGTLIVVNSVMAGFTREMNVRLHGILA 54
Query: 67 HVVIQQKYYPLVDYQFIA 84
++++
Sbjct: 55 DIIMESHSQDGFQNPQWH 72
Score = 50.5 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 12/92 (13%), Positives = 36/92 (39%), Gaps = 9/92 (9%)
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN------AVSGIEVFVKDPDAIEKT 240
+ +TV+ + + +YD+G ++ L+ Q + + AV+ I++ ++D +
Sbjct: 271 EYFTVVDFYESKMSEYDSGFAFVPLKALQQKRGMVDPTTGAEAVTTIQLKLRDGANLVAI 330
Query: 241 HENIVRILGN---GVVVIDWQQRYQIFFSCYE 269
+ + + W+ + +
Sbjct: 331 RDRLRDRFPTEEFPYRIQTWRDMQGPLLAAVQ 362
>gi|326389373|ref|ZP_08210941.1| protein of unknown function DUF214 [Thermoanaerobacter ethanolicus
JW 200]
gi|325994736|gb|EGD53160.1| protein of unknown function DUF214 [Thermoanaerobacter ethanolicus
JW 200]
Length = 391
Score = 55.2 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 33/241 (13%), Positives = 81/241 (33%), Gaps = 11/241 (4%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A R + SN+ +F ++ +G++IGV A+I ++S+ G + ++ + +
Sbjct: 6 ALKIAIRSILSNKMRSF------LTMLGIIIGVTAVIALVSIGQGSTRSITSQIQSMGSN 59
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+++ + ++ + D + + G + V ++ +
Sbjct: 60 LIMVNVMGRGGESSLTYDQAIVLKDSNFIAAISPVISTSVTAMYGNNSVDNTTVNGVNGD 119
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
Y + +G L G ++ ++ + T G
Sbjct: 120 YQSIRDIQVAAGRFILPMDDEGRNRVAVL----GSNVARELFGFTDPIGKTIKLNGQNFT 175
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+L D+ +++ L+ YF + I + PD +E I
Sbjct: 176 VVGILSQKGSSIAGSDDDSIFIPLKTM-FYFAKNRDIRQIYIEATSPDTVELAKNEINSK 234
Query: 248 L 248
L
Sbjct: 235 L 235
>gi|307267044|ref|ZP_07548558.1| protein of unknown function DUF214 [Thermoanaerobacter wiegelii
Rt8.B1]
gi|306917924|gb|EFN48184.1| protein of unknown function DUF214 [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 391
Score = 55.2 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 33/241 (13%), Positives = 81/241 (33%), Gaps = 11/241 (4%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A R + SN+ +F ++ +G++IGV A+I ++S+ G + ++ + +
Sbjct: 6 ALKIAIRSILSNKMRSF------LTMLGIIIGVTAVIALVSIGQGSTRSITSQIQSMGSN 59
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+++ + ++ + D + + G + V ++ +
Sbjct: 60 LIMVNVMGRGGESSLTYDQAIVLKDSSFIAAISPVISTSVTAMYGNNSVDNTTVNGVNGD 119
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
Y + +G L G ++ ++ + T G
Sbjct: 120 YQSIRDIQVAAGRFILPMDDEGRNRVAVL----GSNVARELFGFTDPIGKTIKLNGQNFT 175
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+L D+ +++ L+ YF + I + PD +E I
Sbjct: 176 VVGILSQKGSSIAGSDDDSIFIPLKTM-FYFAKNRDIRQIYIEATSPDTVELAKNEINSK 234
Query: 248 L 248
L
Sbjct: 235 L 235
>gi|150025007|ref|YP_001295833.1| lipoprotein releasing system transmembrane protein LolC
[Flavobacterium psychrophilum JIP02/86]
gi|149771548|emb|CAL43017.1| Lipoprotein releasing system transmembrane protein LolC
[Flavobacterium psychrophilum JIP02/86]
Length = 414
Score = 55.2 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 40/271 (14%), Positives = 89/271 (32%), Gaps = 26/271 (9%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A+ +LFS +K + ++ GV IG+ I + S+M+GF I+ + H+ I
Sbjct: 13 IAYTHLFSKKKQ------TLVAAFGVTIGIAIFIFMNSLMHGFEVYSIESLFKSTPHLRI 66
Query: 71 QQKYYPLVD-----------------YQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGG 113
++ + ++ + + +S+
Sbjct: 67 YKEEKISQPLVADSANNLAILANPKITKENKRLINPNLIIETLKKQPGVIGVTPNVSANV 126
Query: 114 SGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSP 173
S + ++ N GK + + + + +
Sbjct: 127 FYNNGEAQVIGRTSGVNIEEQNTMFHLENYIVEGKYSDLKSNQNGIIIGVSIAQKLNVRL 186
Query: 174 YGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVK 232
+++ SK V+ + R + D + Y ++ AQ N ++ I V +K
Sbjct: 187 NDNISVATAYGVSKVMKVVALLRTGVSNTDKTLSYTNISAAQQLNKQGANYITDIFVNIK 246
Query: 233 DPDAIEKTHENIVRILGNGVVVIDWQQRYQI 263
D + +K ++ +G V DW+
Sbjct: 247 DFETAKKVLPEFKQL--SGYEVEDWETANAS 275
>gi|295101544|emb|CBK99089.1| ABC-type antimicrobial peptide transport system, permease component
[Faecalibacterium prausnitzii L2-6]
Length = 400
Score = 55.2 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 40/264 (15%), Positives = 84/264 (31%), Gaps = 23/264 (8%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A + ++SN+ F ++ +G++IGVMA+IV++ + NG M + + +
Sbjct: 9 ALQNVWSNKLRTF------LTMLGIIIGVMAVIVIVGLGNGMTRSMRDSFSALGTNTLSI 62
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
Q + + + D + K+L VS Q S + R S +
Sbjct: 63 QIWGYGSRTATVDDLYDIVKKNPKLLSSVSPQLDFSDNTPKVGTTTYR---YSGMYGVDE 119
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY-- 189
S+ G + + I + + ++ T + +
Sbjct: 120 SYIEMKGYTLAKGRNIQYMDIADNKQICVIGDYINRTAYGGNAVGQTIKLGPYKFRIVGV 179
Query: 190 -TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ D+ VY+ A N + S + V D + + + L
Sbjct: 180 LKAKISNPDQQEGSDDDSVYLPYTTAMRLSNESSPDSYSAIMV-DESQANEAKAAVEQGL 238
Query: 249 ------GNGVVVID---W-QQRYQ 262
+ V W ++ +
Sbjct: 239 YDIFKSDSAYYVYSASEWLEEMNK 262
>gi|323209821|gb|EFZ94740.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Montevideo
str. 556152]
Length = 259
Score = 55.2 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 50/122 (40%), Gaps = 4/122 (3%)
Query: 148 KGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMV 207
VI+G+ LA LG++ GD+I ++ P + S+ + + D +
Sbjct: 2 YNVILGEQLAGQLGVNRGDQIRLMVPSASQFTPMGRLPSQRLFTVIGTFAANSEVDGYEM 61
Query: 208 YMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFS 266
+++Q+A ++G +++ +P ++ + L G DW++R F
Sbjct: 62 LVNIQDASRLMRYPAGNITGWRLWLDEPLQVDTLS---QQTLPQGTKWQDWRERKGELFQ 118
Query: 267 CY 268
Sbjct: 119 AV 120
>gi|134046006|ref|YP_001097492.1| hypothetical protein MmarC5_0971 [Methanococcus maripaludis C5]
gi|132663631|gb|ABO35277.1| protein of unknown function DUF214 [Methanococcus maripaludis C5]
Length = 397
Score = 55.2 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 39/271 (14%), Positives = 94/271 (34%), Gaps = 20/271 (7%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + A R + + S ++ IG++IG++A++ ++S+ G + + +
Sbjct: 1 MKLKDIVSF--AGRNITQKKTQ------SLLTIIGIVIGILAIVSLISLGYGVQNYITEE 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ V+ + IA +F ++ + V G + GG+ V
Sbjct: 53 ISKAGASVITIYPSQQIT---SIAMSKNFNDRDLRAVENVRGVDVLLYGWFGGALVTY-- 107
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+S + + + Y + + + + + +
Sbjct: 108 NDQEYYSSVFATKASIYQIFFTEAYGYELEKGRWMKDSDTYTCVIGNSLSHDTFDREIDL 167
Query: 181 GM--GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
G I K Y V+G+ D+ + + + A F++ + + V ++D + +
Sbjct: 168 GDKIEINDKKYKVVGVLEPLGNPDDDNSIVIPYEAASEVFDVTDEYNVFMVKIRDGENVA 227
Query: 239 KTHENIVRILGN-----GVVVIDWQQRYQIF 264
K E I + L + V+ +Q +
Sbjct: 228 KVAEEIEKELEDSRGDENFSVLTSEQLAESI 258
>gi|332170942|gb|AEE20197.1| protein of unknown function DUF214 [Krokinobacter diaphorus
4H-3-7-5]
Length = 410
Score = 55.2 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/270 (12%), Positives = 88/270 (32%), Gaps = 5/270 (1%)
Query: 5 SRFEVIVAWRYLFSNR-KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
E +A R + K++ S I+ + + IG++ +++ ++ G + ++ ++V
Sbjct: 1 MNLEYFIAKRLSSATSYKSSASSTIIKIAIVAIAIGMVMMLISIATGLGLQREIRQKVSA 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+G +V+ + ++ + +G
Sbjct: 61 FSGDIVVSNFDGNNSEETPNPISINQDFYPDFNAVPEVTHVQAITVKAGVIRTAETFEGV 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVII---GKDLARNLGISIGDKINILSPYGDVTPM 180
+ + + + + L +G K+ + V
Sbjct: 121 IYKGLGDDYDWNRIEEYIVEGRKPELTGALNNETIFSTYLANRLGFKVGDKAIIQFVNKD 180
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEK 239
M R ++ ++G++ + ++D + + N E + V EVFV D D +E
Sbjct: 181 NMRFRPRALEIVGLYESAYQEFDKVYIMGDRRHLTRINNWEKDEVGSFEVFVDDFDNLEA 240
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + G+ + I Q F +
Sbjct: 241 LNNKVYENSGSTLRSISVIQSNYNIFEWIK 270
>gi|167038397|ref|YP_001665975.1| hypothetical protein Teth39_2013 [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|167038869|ref|YP_001661854.1| hypothetical protein Teth514_0200 [Thermoanaerobacter sp. X514]
gi|256751136|ref|ZP_05492018.1| protein of unknown function DUF214 [Thermoanaerobacter ethanolicus
CCSD1]
gi|300913544|ref|ZP_07130861.1| protein of unknown function DUF214 [Thermoanaerobacter sp. X561]
gi|307723441|ref|YP_003903192.1| hypothetical protein Thet_0239 [Thermoanaerobacter sp. X513]
gi|320116801|ref|YP_004186960.1| hypothetical protein Thebr_2062 [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|166853109|gb|ABY91518.1| protein of unknown function DUF214 [Thermoanaerobacter sp. X514]
gi|166857231|gb|ABY95639.1| protein of unknown function DUF214 [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|256750042|gb|EEU63064.1| protein of unknown function DUF214 [Thermoanaerobacter ethanolicus
CCSD1]
gi|300890229|gb|EFK85374.1| protein of unknown function DUF214 [Thermoanaerobacter sp. X561]
gi|307580502|gb|ADN53901.1| protein of unknown function DUF214 [Thermoanaerobacter sp. X513]
gi|319929892|gb|ADV80577.1| protein of unknown function DUF214 [Thermoanaerobacter brockii
subsp. finnii Ako-1]
Length = 391
Score = 55.2 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/241 (13%), Positives = 81/241 (33%), Gaps = 11/241 (4%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A R + SN+ +F ++ +G++IGV A+I ++S+ G + ++ + +
Sbjct: 6 ALKIAIRSILSNKMRSF------LTMLGIIIGVTAVIALVSIGQGSTRSVTSQIQSMGSN 59
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+++ + ++ + D + + G + V ++ +
Sbjct: 60 LIMVNVMGRGGESSLTYDQAIALKDSSFIAAISPVISTSVTAMYGNNSVDNTTVNGVNGD 119
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
Y + +G L G ++ ++ + T G
Sbjct: 120 YQSIRDLQVAAGRFILPMDDEGRNKVAVL----GSNVARELFGFTDPIGKTIKLNGQNFT 175
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+L D+ +++ L+ YF + I + PD +E I
Sbjct: 176 VVGILSQKGSSIAGSDDDSIFIPLKTM-FYFAKNRDIRQIYIEATSPDTVELAKNEINSK 234
Query: 248 L 248
L
Sbjct: 235 L 235
>gi|328469865|gb|EGF40776.1| hypothetical protein VP10329_03677 [Vibrio parahaemolyticus 10329]
Length = 422
Score = 55.2 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 48/284 (16%), Positives = 86/284 (30%), Gaps = 28/284 (9%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M V +AW L NR+ S +S + + I V AL + + +
Sbjct: 1 MGKLIPVSVRLAWLNLQRNRRR------SLLSMLIIAIAVFALTSAGGFGLYTYDSLKES 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIA-----------NRLDFIPDVIKVLPFVSGQAFVSGL 109
GH+ + Y + + +L + +V V P V +S
Sbjct: 55 TARDTGHLTLTTPGYFAKEEEMPLSNGLSHADAITQQLIGLSEVRGVQPRVEFSGLISNG 114
Query: 110 SSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN 169
+ + + R +SN + + S
Sbjct: 115 NKSSIFIGIGVNEREFDMKGPFLDVRDGQTLSNIHASRYDASEPEVMLGVDLASNLSVYV 174
Query: 170 ILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV 229
T + + + V G++ P+ D +Y+ + AQ + VS + V
Sbjct: 175 GDWITLLATTTDGALNAYDFKVRGIYSTGVPELDKRQLYVHINSAQSLLG-SDKVSALSV 233
Query: 230 FVKDPDAIEKTHENIVRILG--------NGVVVIDWQQRYQIFF 265
F+ D K + + IL V + WQ+R FF
Sbjct: 234 FLFDTSLTNKVEQQVATILNKQKPSFGDQEVEITPWQER--AFF 275
>gi|90411327|ref|ZP_01219339.1| hypothetical protein P3TCK_10908 [Photobacterium profundum 3TCK]
gi|90327856|gb|EAS44187.1| hypothetical protein P3TCK_10908 [Photobacterium profundum 3TCK]
Length = 410
Score = 55.2 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/274 (13%), Positives = 83/274 (30%), Gaps = 25/274 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +AWR L+ N+ + + +IGV ++I MNG +MI +
Sbjct: 3 IKLAWRNLWRNKLRTS---IMLFAMVFGLIGVASMI---GFMNGMYGNMIDNAIAWQTSN 56
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI------- 121
+ + + + + + + ++ A+ + + G R
Sbjct: 57 IQIHRSEYINEPEINDTIIGSEQIIEQLRDMPDVSAWSARFIADGMVASARSTRGVKING 116
Query: 122 -SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + S V++ A L + +G K+ +
Sbjct: 117 IDLEAEAKVTPLVSHIIEGEWLSEQGRNPVLVSSKTADRLRLRVGSKVVLTFTDAANDVS 176
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD----- 235
G R + F+ +D VY+ + ++ + V I + V +
Sbjct: 177 GAAFRVRGI-----FKSPSSSFDESNVYVRRSDLSALAHI-DGVHEIAIVVNEATPSSNI 230
Query: 236 AIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + DWQQ + + +
Sbjct: 231 VTQAVKAQLQTQTSKLNTIRDWQQIQPMLATMIK 264
>gi|194335836|ref|YP_002017630.1| protein of unknown function DUF214 [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308313|gb|ACF43013.1| protein of unknown function DUF214 [Pelodictyon phaeoclathratiforme
BU-1]
Length = 424
Score = 55.2 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/275 (13%), Positives = 91/275 (33%), Gaps = 30/275 (10%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A+ +L ++ + ++ +GV +G L+ ++V G +++ +V+ HVVI
Sbjct: 9 IAFVHLRERKRQ------TLLTALGVAVGSAMLVTTIAVSRGSSSNVVAKVIDTAPHVVI 62
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
+ + I + + ++ + Q + S + S ++
Sbjct: 63 SAERVVPLVPDNIIGQHGVMVSMVTKNINLDEQEVIKNYSEVIESIKPVKELQSISPFVL 122
Query: 131 NSFS---------------------RFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN 169
+ G N ++ + L + K
Sbjct: 123 SKVIARNKTRFTPCIARGVVPRLEAEIAGLKKNLIEKNALDELAATPNGVLVGDLLAKKL 182
Query: 170 ILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIE 228
+ + + T++G F F D Y++L AQ + N+VSG+
Sbjct: 183 NVGYRDRIVLVTKNSEEFPVTLVGRFSSGFNAKDEREAYVNLPFAQRMEGIASNSVSGVG 242
Query: 229 VFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQI 263
+ + ++T + + + +G W + +
Sbjct: 243 LRTAHVERAQETSDRVEAL--SGYKSESWDETNRN 275
>gi|240139216|ref|YP_002963691.1| putative ABC transporter, permease protein [Methylobacterium
extorquens AM1]
gi|240009188|gb|ACS40414.1| putative ABC transporter, permease protein [Methylobacterium
extorquens AM1]
Length = 387
Score = 55.2 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/246 (14%), Positives = 73/246 (29%), Gaps = 28/246 (11%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+ WR L + GV +G+ A + ++++ G +++ ++ G+ ++V+
Sbjct: 6 LVWRNLVRRPGRFA------FTLAGVAVGIAAFVALLTLGQGLTQEIRRQAQGLGANLVV 59
Query: 71 QQKYYPLVDY-------QFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
K + + Q I +P V + V I
Sbjct: 60 TPKGWCAYEQISVLTGEQLPEAIAMTELAKIAAVPGVRTAVPYLNQRTAFRNRPVPLIGI 119
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ R GV+IG +A+ G+ G+ + V +
Sbjct: 120 QPTAMRALQGWRVGQGRYFQGPDEAGVVIGAAIAQQFGLRPGETFTVRGRPLPVVGVLDT 179
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+K + L Q + E VS + V V D + ++
Sbjct: 180 TGTKDDVA---------------AFAPLAVVQRIYETEGKVSFVAVQVDDLERADEISLR 224
Query: 244 IVRILG 249
I
Sbjct: 225 IQEAAN 230
>gi|288926319|ref|ZP_06420243.1| membrane protein [Prevotella buccae D17]
gi|288336924|gb|EFC75286.1| membrane protein [Prevotella buccae D17]
Length = 390
Score = 55.2 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/247 (17%), Positives = 87/247 (35%), Gaps = 9/247 (3%)
Query: 31 ISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFI 90
I+ +GV IG+ ++V +SV+ GF+ + +V G H+ + + Q+ D +
Sbjct: 3 IATLGVAIGLAVMLVSVSVVLGFKHTIRDKVTGFGSHIQVADFMTLQMGEQYPVVMNDSM 62
Query: 91 PDVIKVLPFV-SGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKG 149
V++ + V Q + + G++ +S V+ R
Sbjct: 63 TSVLRNIKGVAHVQRYAVKQGIIKTDDDFLGVAFKGVGPDFDSTFLHSNMVTGSIPRFSD 122
Query: 150 VIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYM 209
L + ++ ++ G+R++ +T+ G++ YD M Y
Sbjct: 123 TASSNRLLVSRIMADKLNLHCGQKVFAYFIDHNGVRARRFTIAGIYETNLKRYDEVMCYT 182
Query: 210 SLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHENIVRI-------LGNGVVVIDWQQRY 261
L + SG E+ V D D +++ + R G + ++
Sbjct: 183 DLYTVVKLNGWEPDQASGAELTVSDFDRLDEVSARVTRKVNRTVDHYGETYSSANVKELN 242
Query: 262 QIFFSCY 268
FS
Sbjct: 243 PQIFSWL 249
>gi|223937824|ref|ZP_03629724.1| protein of unknown function DUF214 [bacterium Ellin514]
gi|223893430|gb|EEF59891.1| protein of unknown function DUF214 [bacterium Ellin514]
Length = 405
Score = 54.8 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/261 (14%), Positives = 83/261 (31%), Gaps = 14/261 (5%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M I + + +A R L N+ + ++ +G++IGV A+I +S+ NG + + +
Sbjct: 1 MKILAT--LKIAARALKRNKLR------TILTMLGMIIGVGAVIATVSLGNGAKAQVEGQ 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + +VV+ V L V+ +S
Sbjct: 53 IASLGQNVVLIFSGSFTRGGVHSGWGGAGTLSVEDALSIEREVPGVTLVSPELRSGSQVA 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
N ++ + Y ++ + +D+ +++ + + D +
Sbjct: 113 AGNQNWGTNIQGEGQDYLDIRQWPLAEGSMFSEQDVRGAGKVAVIGQTVAKQLFPDGNVI 172
Query: 181 GMGIRSKSYTV------LGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G IR K+ + + +V + A + GI V P
Sbjct: 173 GQIIRIKNVPFIVVGALVPKGLSVMGQDQDDVVIVPYTSAMRRLFGATMLRGITVQASSP 232
Query: 235 DAIEKTHENIVRILGNGVVVI 255
+ + I +L +
Sbjct: 233 KMLSSVQQEITFLLRQRHRIQ 253
>gi|21673097|ref|NP_661162.1| hypothetical protein CT0258 [Chlorobium tepidum TLS]
gi|21646169|gb|AAM71504.1| conserved hypothetical protein [Chlorobium tepidum TLS]
Length = 422
Score = 54.8 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/292 (13%), Positives = 85/292 (29%), Gaps = 39/292 (13%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F +A R++ ++ + + + V + M LI +S+ G + + ++
Sbjct: 1 MFRTL-FDIAIRHILGRKRQ------TLTTMLAVSVSTMVLITTISLTRGLLDSFTETII 53
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H+ I+ + + + + V + + G +V +
Sbjct: 54 DAAPHIRIKGEKIDPMPTNLFDSLA--VSRKAFVTDNIGRDEPEEVRNYGRILDIVSSQA 111
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK--------------- 167
S + F V+ G D+ R IS +
Sbjct: 112 FSGKVVAASPFVESQIIAVKGNRTQPVVLKGVDIDREDRISHIGRSLTSGDLVLFRKTPD 171
Query: 168 ---------INILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF 218
++ D + + + + + SL+ Q+
Sbjct: 172 ALLVGSSVATDLGVELNDQVTIITPDGRSRQGKVTGIFFTGINAADNTILSSLKLGQIVE 231
Query: 219 NL-ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQI---FFS 266
+ N V+GI + V DP ++ R+ G + WQ+ F
Sbjct: 232 GMPPNKVTGIALKVVDPLNDAPLARDLERM--TGYRCLTWQEENASVLVLFK 281
>gi|224534849|ref|ZP_03675418.1| lipoprotein releasing factor [Borrelia spielmanii A14S]
gi|224513789|gb|EEF84114.1| lipoprotein releasing factor [Borrelia spielmanii A14S]
Length = 417
Score = 54.8 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/242 (14%), Positives = 88/242 (36%), Gaps = 5/242 (2%)
Query: 28 ASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRL 87
+ + + + +G + +I+ +S+MNGF+ D +V Q +
Sbjct: 21 LTIVIILSITLGEIIIILTISIMNGFQNDF----FLSITNVESGNLKIENELTQEELLEI 76
Query: 88 DFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRG 147
I + + Q + + + I D QN S + + +
Sbjct: 77 KKIKGINHINKMYETQGIGIQNYYYPTILNIIAIDIKDLKKDQNFISFTGLDKTELDLKD 136
Query: 148 KGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMV 207
+IIG L+ N + D + ++ + + K++ + +F+ + + ++
Sbjct: 137 NEIIIGNVLSYNFNLFENDYLGLIITDEIKNFISLENDIKNFKIKSIFKSNYAKINEALI 196
Query: 208 YMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSC 267
+M++ L N+ ++ K+ + K E I + + + V W + + F+
Sbjct: 197 FMNIDYFIKNKILHNSSINYQIKTKNLNPSNKLIEKI-KAINPQIKVKTWNEYNKEFYKT 255
Query: 268 YE 269
+
Sbjct: 256 LK 257
>gi|54302804|ref|YP_132797.1| hypothetical protein PBPRB1125 [Photobacterium profundum SS9]
gi|46916228|emb|CAG22997.1| conserved hypothetical protein [Photobacterium profundum SS9]
Length = 410
Score = 54.8 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/274 (13%), Positives = 84/274 (30%), Gaps = 25/274 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +AWR L+ N+ + + +IGV +I MNG +MI +
Sbjct: 3 IKLAWRNLWRNKLRTG---IMLFAMVFGLIGVAGMI---GFMNGMYGNMIDNAIAWQTSN 56
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI------- 121
+ + + + + + + ++ A+ + + G R
Sbjct: 57 IQIHRSEYINEPEINDTIIGSEQIIAQLRDMPDVSAWSARFIADGMVASARSTRGVKING 116
Query: 122 -SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + S V++ A L + +G K+ +
Sbjct: 117 IDLEAEAKVTPLVSHIIEGEWLSEQGRNPVLVSSKTAERLRLRVGSKVVLTFTDAANDVS 176
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD----- 235
G R + F+ +D+G VY+ + ++ + V I + V +
Sbjct: 177 GSAFRVRGI-----FKSPSSSFDDGNVYVRRSDLSALAHI-DGVHEIAIVVNEATPSSNI 230
Query: 236 AIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + DWQQ + + +
Sbjct: 231 VTQAVKAQLQAKTSALNTIRDWQQIQPMLATMIK 264
>gi|313677442|ref|YP_004055438.1| hypothetical protein Ftrac_3356 [Marivirga tractuosa DSM 4126]
gi|312944140|gb|ADR23330.1| protein of unknown function DUF214 [Marivirga tractuosa DSM 4126]
Length = 405
Score = 54.8 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/266 (12%), Positives = 80/266 (30%), Gaps = 2/266 (0%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+A R + S F I+ + IG+ +++ + ++ GF++ + +V
Sbjct: 1 MNLPDFIAKRTINSKTGQ-FSGSIYKIAISSIAIGLAIMLIALLILGGFQKTIKDKVFSF 59
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
GH+ + + + + + L F+ V+ +
Sbjct: 60 AGHLQVTKYTLSNSFDESPISIETDFFQNHEDLDFIRHVQGVAYKAGLLKTEEAVEGVVI 119
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ F N+ L + +
Sbjct: 120 KGIGADYDTANFASNLIQGRFPNVNSEEYSTEIIISKEIAQLLRLELGEKVIMYFVQNPP 179
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHEN 243
R + ++G++ D+D M+ ++ Q + + V EVF+ D E+
Sbjct: 180 RYRQLEIVGVYETGLEDFDERMIIGDVRMIQRLNDWTADQVGSFEVFINDDIDEEEAESI 239
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + V ++Y +F E
Sbjct: 240 VFDKVEADQFVNLTSKKYPQYFEWLE 265
>gi|187917957|ref|YP_001883520.1| cell division protein FtsX [Borrelia hermsii DAH]
gi|119860805|gb|AAX16600.1| cell division protein FtsX [Borrelia hermsii DAH]
Length = 412
Score = 54.4 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/269 (14%), Positives = 99/269 (36%), Gaps = 10/269 (3%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + + R + + ++ ++I +S +++G + +I+ +S+MNGF+ D
Sbjct: 1 MKM--GLNKFLLKRLILDEQNSSSLTIVIILS---IVLGQIIIIITISIMNGFQNDFFTS 55
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + N L I ++I++ Q S + +
Sbjct: 56 IS----TLESGNLKIESKLNDQELNALKEIKEIIQINKIYETQGIGIENYYYPSILNIIA 111
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ D ++ S +IIG L+ NLG+ GD I ++
Sbjct: 112 LDTEDIIKDKDFILLTGLTQSELQLNDDEIIIGDVLSHNLGLFEGDIIGLILSDEIKNLQ 171
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ K + + +F+ + + V+M++ ++++ ++ ++ +K
Sbjct: 172 TLKDEVKHFKIKAIFKSNYAKINESTVFMNINYFYKKQLIKDSDINYQIKTQNLYPSKKL 231
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
I + + + + W + + F+ +
Sbjct: 232 INKI-KNINSNIQFKPWNEYNKEFYKALK 259
>gi|269798131|ref|YP_003312031.1| hypothetical protein Vpar_1070 [Veillonella parvula DSM 2008]
gi|269094760|gb|ACZ24751.1| protein of unknown function DUF214 [Veillonella parvula DSM 2008]
Length = 403
Score = 54.4 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/259 (13%), Positives = 94/259 (36%), Gaps = 13/259 (5%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ ++AW L +N+ S ++ +G++IGV A+I ++S+ NG ++D+ +
Sbjct: 1 MYKESFLMAWASLVANKLR------SLLTMLGIIIGVAAVIALVSIGNGVKQDIEDSISS 54
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ ++++ P + + + + +V +
Sbjct: 55 LGSNLLVVMPGAPRTPGVRPSQGSMKSLKISDYEVIAKLEGVKAASPMTNGSYVVIYQNK 114
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + + + +V+N K++ +++ + + + + D P+G
Sbjct: 115 NWTTSVAG-VNSNFQDVNNWTMTSGRFFSDKNVQNRERVAVVGQTVVKNLFADEDPVGKE 173
Query: 184 IRSKSYTV------LGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
IR K+ + + V + + + + + V KD + I
Sbjct: 174 IRVKNIPFRVIGVLKSKGNGTMGNDQDDTVLIPYTTSMERVEGIDYLRMVYVVAKDDEGI 233
Query: 238 EKTHENIVRILGNGVVVID 256
++ +I +L + D
Sbjct: 234 DRLQADIENLLRVRHNIKD 252
>gi|262374953|ref|ZP_06068187.1| peptide ABC transporter permease [Acinetobacter lwoffii SH145]
gi|262309966|gb|EEY91095.1| peptide ABC transporter permease [Acinetobacter lwoffii SH145]
Length = 658
Score = 54.4 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/258 (12%), Positives = 84/258 (32%), Gaps = 9/258 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + ++R F ++ +G++IG+ +++ V+++ NG ++ +++ + + +
Sbjct: 265 AFRMALLAMNAHRMRTF------LTMLGIIIGIASVVSVVALGNGSQKQILENISSLGTN 318
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + D + IP L VS + + I S
Sbjct: 319 TITVFQGRGFGDNSRSSQSKTLIPADADALAEQPYVDGVSPSVNSSVTGRYKEIEASTTV 378
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ + ++ + A+++ I K + + + S
Sbjct: 379 NGVSEDFFYVRGMTFQSGQPFDRSSVMQQAQDVVIDTNTKNTFFKDGTNPVGQVILLGSV 438
Query: 188 SYTVLGMFRMRFPDYDNG---MVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
++G+ + N VY+ ++ V I V +KD I
Sbjct: 439 PSRIIGVIDAQKGMMGNNDSLNVYLPYSTVMSRMLGKSNVRSIIVRIKDEYPSAAAENAI 498
Query: 245 VRILGNGVVVIDWQQRYQ 262
+ +L D +
Sbjct: 499 LNLLVQRHGAQDVFTQNA 516
>gi|74317430|ref|YP_315170.1| hypothetical protein Tbd_1412 [Thiobacillus denitrificans ATCC
25259]
gi|74056925|gb|AAZ97365.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
25259]
Length = 400
Score = 54.4 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/271 (12%), Positives = 89/271 (32%), Gaps = 24/271 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+++A R + N +F ++ +G++IGV A+++++++ NG + ++ + ++
Sbjct: 6 LLLALRAIRRNLMRSF------LTVLGIVIGVAAVVIMVTLGNGATRSVSDQISSMGSNL 59
Query: 69 VIQQKYYPLVD-----YQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
++ + F + I + I V+ +S + ++
Sbjct: 60 LMVRPGQRYGPGAEAAPNFKLADAEAIRNQISAAEAVAPVVSMSVTAVYQVRNWSTVVTG 119
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
S+ Y S + GK + +P G +
Sbjct: 120 SNNDYFAAGNWEIAAGRSFN---DAEERAGKAVCVIGESVREKLFGGQNPVGSDIRIKQF 176
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ + + + M L+ Q V+ + V V+ +I+ +
Sbjct: 177 SCEVIGLLKPKGQSAMGSDQDDTIVMPLRTVQRRLAGSQDVNRLSVSVRAGASIDVAKDQ 236
Query: 244 IVRIL----------GNGVVVIDWQQRYQIF 264
+ +L + V+D +Q +
Sbjct: 237 LTLLLRERRGIADNEEDDFRVMDTRQIAETL 267
>gi|303228415|ref|ZP_07315248.1| efflux ABC transporter, permease protein [Veillonella atypica
ACS-134-V-Col7a]
gi|303230820|ref|ZP_07317567.1| efflux ABC transporter, permease protein [Veillonella atypica
ACS-049-V-Sch6]
gi|302514580|gb|EFL56575.1| efflux ABC transporter, permease protein [Veillonella atypica
ACS-049-V-Sch6]
gi|302516917|gb|EFL58826.1| efflux ABC transporter, permease protein [Veillonella atypica
ACS-134-V-Col7a]
Length = 403
Score = 54.4 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/259 (13%), Positives = 94/259 (36%), Gaps = 13/259 (5%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ ++AW L +N+ S ++ +G++IGV A+I ++S+ NG ++D+ +
Sbjct: 1 MYKESFLMAWASLIANKMR------SILTMLGIIIGVAAVIALVSIGNGVKQDIQNSISS 54
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ ++++ P + V + + + S
Sbjct: 55 LGSNLLMVMPGAPRTPGVRPSQGSMKSLKVSDYQAISKLDGVKAASPYTANSYVTIYQSK 114
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + S + +V+N I K++ +++ + + + + P+G
Sbjct: 115 NWTTTVSG-VSSNFQDVNNWTMAEGRFISSKNVENRERVAVVGQTVVKNLFAGEDPVGKE 173
Query: 184 IRSKSYTV------LGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
IR K+ + + ++++ A + + + V D + I
Sbjct: 174 IRVKNIPFRVIGVLNSKGNGTMGNDQDDVIFIPYTTAMERVEGVDYLRMVYVVASDDNGI 233
Query: 238 EKTHENIVRILGNGVVVID 256
++ +I +L + D
Sbjct: 234 DRLQSDIENLLRVRHSIKD 252
>gi|269963642|ref|ZP_06177965.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269831655|gb|EEZ85791.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 411
Score = 54.4 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/276 (14%), Positives = 95/276 (34%), Gaps = 28/276 (10%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+AWR L+ N+ + I ++ G+M ++ +M MNG + MIK + +
Sbjct: 4 KLAWRNLWRNKLR------TSIMLGAMVFGLMGVVAMMGFMNGLVDSMIKNAISWQTSHL 57
Query: 70 IQQKYYPLVDYQ--------FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
Q+ LV+ + +++ +K + + + G+ + G+
Sbjct: 58 QIQQKSYLVNPELKDVIPDAEKISKVLASNREVKAISERFLADGMIASARSTRGIRINGV 117
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ + + +++ +A L + +G K+ + + G
Sbjct: 118 NIDQEQNITPLSQHIVDGEWLSEEGRNPILVSSKIAERLKLRVGSKVVLTLSDVNGEVAG 177
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
R + F+ +D+G VY+ + + L I + + + E
Sbjct: 178 AAFRVRGI-----FKTPSTGFDDGNVYVRKADLEKVAGLSGT-HEIAILLTSNNDAE-LK 230
Query: 242 ENIV---RILGNG----VVVIDWQQRYQIFFSCYES 270
+ + IL + V WQ+ + + +
Sbjct: 231 QLLAFTHSILPPESKDLLSVRPWQEIQPLLSTMMST 266
>gi|124027776|ref|YP_001013096.1| ABC transporter [Hyperthermus butylicus DSM 5456]
gi|123978470|gb|ABM80751.1| predicted ABC transporter [Hyperthermus butylicus DSM 5456]
Length = 408
Score = 54.4 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/252 (13%), Positives = 79/252 (31%), Gaps = 11/252 (4%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A R L R + ++ +G+ IG +AL+ + SV+ G+ ++ ++ + +++I
Sbjct: 13 LALRSLSEKRLR------AVLTIVGISIGPLALVAMTSVVKGYSSYVLAQLQSLGQNLII 66
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
+ ++ +P V PF FV S + + F +
Sbjct: 67 VTPSQGYKLTEDDLRFIESLPGVKHASPFYLLTGFVRVGSEEKKVTIYATSIDLMFEAVN 126
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARN----LGISIGDKINILSPYGDVTPMGMGIRS 186
S + N I+ +
Sbjct: 127 GLEIIEGSKPSESDLIRAVIGYNVAFDENDRQVYHAGDPITISYYRAERARKIERRQVTV 186
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
++ F + + ++ + + F + SGI V ++ + + E I
Sbjct: 187 IVSGIVNRFGGALFLSPDDSILLNTEAGRKLFGF-SEWSGILVLAENSRYVPQITEAIRA 245
Query: 247 ILGNGVVVIDWQ 258
V V+ +Q
Sbjct: 246 AYRGSVEVMSFQ 257
>gi|167622209|ref|YP_001672503.1| hypothetical protein Shal_0268 [Shewanella halifaxensis HAW-EB4]
gi|167352231|gb|ABZ74844.1| protein of unknown function DUF214 [Shewanella halifaxensis
HAW-EB4]
Length = 374
Score = 54.4 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/224 (13%), Positives = 64/224 (28%), Gaps = 2/224 (0%)
Query: 43 LIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSG 102
+IVV + + G + M + L + + L D + + + +++ L
Sbjct: 1 MIVVSAFLRGMVDGMNQTSLNNLPGEIQLHQRDFLNDQNVMNHIPEPAGALLQQLHQSWI 60
Query: 103 QAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDF--DRGKGVIIGKDLARNL 160
+ S + S R S + F N K +
Sbjct: 61 TQWASRVRSPVMIGSERVTLGSQLIAIAPQQEPFTVNELELVAGRMLKDGEDNGIIIGQK 120
Query: 161 GISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL 220
+ + + I V+G++ + +Y Q N+
Sbjct: 121 MATRLKTALNKRVVITLQDVDNEIAESGVRVVGIYHKPTEQEELATIYTGKGFIQKLLNM 180
Query: 221 ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIF 264
V+ I VF +E+ ++ + + V W+Q
Sbjct: 181 PGMVTEIAVFTDTNQPLEQVVSSLESAVDDSYDVATWRQLNGYL 224
>gi|218133755|ref|ZP_03462559.1| hypothetical protein BACPEC_01624 [Bacteroides pectinophilus ATCC
43243]
gi|217991130|gb|EEC57136.1| hypothetical protein BACPEC_01624 [Bacteroides pectinophilus ATCC
43243]
Length = 402
Score = 54.4 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/248 (12%), Positives = 77/248 (31%), Gaps = 9/248 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ ++ + + +N+ +F ++ +G++IGV A+I ++++++G + ++ + + +
Sbjct: 7 SISMSIKNIRTNKMRSF------LTTLGIIIGVTAVIALITIVHGVYDSVMGQFSELGAN 60
Query: 68 VVI---QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ ++ + V P V+ A V S + +
Sbjct: 61 TITVSVTGNAMKTGISDSDIENIEALKYVNGTSPSVTTTATVMYEGSKNTVTVQGRSDAY 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ N II +D A+ + L G +
Sbjct: 121 FRNTTTNLVLGRELTSLEMDGSVYTCIIDRDCAQTFFLGTNPLGQTLKLNGYTYTVVGLT 180
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
S F N + L ++ +EV+V D + +
Sbjct: 181 DDGSDDDNSSFNSFGQSSSNAGTVIIPYRNALRMTSSGNITSLEVYVSDTRYSDAVTAAV 240
Query: 245 VRILGNGV 252
IL
Sbjct: 241 ENILSESF 248
>gi|326792013|ref|YP_004309834.1| hypothetical protein Clole_2939 [Clostridium lentocellum DSM 5427]
gi|326542777|gb|ADZ84636.1| protein of unknown function DUF214 [Clostridium lentocellum DSM
5427]
Length = 407
Score = 54.4 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/267 (13%), Positives = 88/267 (32%), Gaps = 18/267 (6%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ + A + L N+ + ++ +G+ IGV A+I+++++ GF+ +
Sbjct: 1 MNMLGE-SIKSAIKQLMGNKGR------TILTMLGMFIGVGAVIMILALGTGFQTYIKSS 53
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLS-SGGSGVLVR 119
+ + V +Y+ ++ I + ++ V G L G L
Sbjct: 54 FMDMGLGVFQVSAKEEKSEYKIDTEDVNLIKSLPEIESVVRGNDSRGNLYTQKGESFLCN 113
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ S + + + +A + ++ + + G+
Sbjct: 114 ISGIEPDYVNEISPLDILAGRNLNDKDEEAYSNSVVIADVVSKALYGEKSYERVVGEQIE 173
Query: 180 MGMGIRSKSYTVLGMFRMR----------FPDYDNGMVYMSLQEAQLYFNLENAVSGIEV 229
+ + + S+ ++G+++ Y+ + L +V I
Sbjct: 174 ITINKQPISFQIVGVYKTNSSKDLSRKELDRMITQKTFYIPYSKLDQLLGLGGSVRTIAG 233
Query: 230 FVKDPDAIEKTHENIVRILGNGVVVID 256
VK + I +IL + D
Sbjct: 234 IVKGGYDQSEVTTRIGQILNKRHHLKD 260
>gi|219684838|ref|ZP_03539780.1| lipoprotein releasing factor [Borrelia garinii PBr]
gi|219671783|gb|EED28838.1| lipoprotein releasing factor [Borrelia garinii PBr]
Length = 417
Score = 54.4 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/260 (14%), Positives = 95/260 (36%), Gaps = 8/260 (3%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+ R + + + ++I +S + +G + +I+ +S+MNGF+ D +V
Sbjct: 6 FLLKRLILEEKNSLALTIVIILS---IALGEIIIILTISIMNGFQNDF----FLSTTNVE 58
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
Q ++ I + + Q + + + + D
Sbjct: 59 SGNLKIENELTQEEIKKIKKIEGIKHINKIYETQGIGIQDYYYPTILNIIAVDIKDLKKD 118
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
QN + + +IIG L+ NL + D + ++ + + K++
Sbjct: 119 QNFITFTGLEKDELDLKDDEIIIGNVLSYNLNLFKNDTLRLIITDEIKNFISLENDIKNF 178
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
+ +F+ + + +++M++ L N+ +V K+ + K E I + +
Sbjct: 179 KIKSIFKSNYAKINETLIFMNIDYFIKNNLLHNSSINYQVKTKNLNPSNKLIEKI-KAIN 237
Query: 250 NGVVVIDWQQRYQIFFSCYE 269
+ V W + + F+ +
Sbjct: 238 PKIKVKTWNEYNKEFYKTLK 257
>gi|149176427|ref|ZP_01855041.1| probable lipoprotein releasing system transmembrane protein LolC
[Planctomyces maris DSM 8797]
gi|148844779|gb|EDL59128.1| probable lipoprotein releasing system transmembrane protein LolC
[Planctomyces maris DSM 8797]
Length = 533
Score = 54.4 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/95 (17%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL------ENAVSGIEVFVKDPD 235
R + TV+ +F+ ++D+ +V+ +L+ Q + E +++ I++ +K P+
Sbjct: 291 PEPRHFNATVVDLFKSNMSEHDSSLVFCNLEYLQEMRGMIDPVNGEKSITSIQIKLKHPE 350
Query: 236 AIEKTHENIVRILGNG-VVVIDWQQRYQIFFSCYE 269
+ L G V W+ + + E
Sbjct: 351 DAAMVVSKLEEALPAGRFRVRTWEDKQGPLLAAVE 385
Score = 50.5 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/193 (13%), Positives = 60/193 (31%), Gaps = 19/193 (9%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + RYL + + S I + +GV +IVV SVM+GF DM R+
Sbjct: 1 MYKSL---LCLRYLRTR-------YIALASIISMTLGVATMIVVNSVMDGFSTDMRTRLR 50
Query: 63 ---------GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGG 113
+ + + I + + + +++ +S Q S
Sbjct: 51 GILADVIVETNSLDGEPDTRDIKNSIQRAIGDDIAGMTSTVEIYAMLSVQYGSQWQSKPV 110
Query: 114 SGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSP 173
+ + + + + L N +++ + + + D+ N P
Sbjct: 111 TLIGIDPETKATVGPLAQYLEHTKDNDIPNWELSPEAMAYRKEWTTRAQWMVDRWNHNPP 170
Query: 174 YGDVTPMGMGIRS 186
+
Sbjct: 171 PIEENEQVSFEEP 183
>gi|319399928|gb|EFV88174.1| permease family protein [Staphylococcus epidermidis FRI909]
Length = 398
Score = 54.4 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/249 (12%), Positives = 75/249 (30%), Gaps = 7/249 (2%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
MS FS + VA R + N++ + IG++IG+ ++I +MS+ NGF++ ++
Sbjct: 1 MSNFSNV-ISVAIRSILKNKRRN------IFTMIGIIIGIASVITIMSLGNGFKKSTTEQ 53
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
Y + N D+ V ++ + +
Sbjct: 54 FNNAGAGKNQASISYMTENMDAPKNNPFKQEDMSVVEQVNGVKSAKVKEDKDSTYSVKIT 113
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
++ + + + +A N + +
Sbjct: 114 NTHGSSDASLKKVDKLTDVDEGKGFTNDDNEVLEKVAVIDKKIAKKVFNNHAMGQSIYVN 173
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G G + + ++ + S + NL + + V V+ +
Sbjct: 174 GEGFKVVGVSDSSEVDESGMPIESLIQIPSKTFNKYMGNLTQGMPQLLVTVEKGSDKKDI 233
Query: 241 HENIVRILG 249
+ + + L
Sbjct: 234 GKKVEKALN 242
>gi|222055204|ref|YP_002537566.1| protein of unknown function DUF214 [Geobacter sp. FRC-32]
gi|221564493|gb|ACM20465.1| protein of unknown function DUF214 [Geobacter sp. FRC-32]
Length = 408
Score = 54.4 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/256 (11%), Positives = 80/256 (31%), Gaps = 15/256 (5%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A R L N+ +F ++ +G++IG+ ++I ++++ G ++ + +++ + +
Sbjct: 6 SFKIALRALRVNKMRSF------LTMLGIIIGIASVIAMVAIGTGAQKKISEQIASMGSN 59
Query: 68 VVIQQKYYPL----VDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+++ A L + S + GG V +
Sbjct: 60 LILIIPGSTTTAGVRVGSGAAPTLTYDDARAIRAECPSVEEAAPTTRGGGQVVYANQNWS 119
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINI--LSPYGDVTPMG 181
+ + F + + + P G V +
Sbjct: 120 TVIMGITADFLTVREWPIAAGRNFTQSDVDGMTKNCIIGQTIADNLFGSVDPVGKVIRIK 179
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQ-LYFN--LENAVSGIEVFVKDPDAIE 238
+ + + +V + ++ AQ F NAV+ I + + +
Sbjct: 180 KVPFLVVGLLEKKGQSPQGTDQDDVVNIPIRTAQRKLFGSPFPNAVNSILIRATGSEDLS 239
Query: 239 KTHENIVRILGNGVVV 254
+ E + +L +
Sbjct: 240 RAEEEVTALLKQRHHI 255
>gi|228989906|ref|ZP_04149883.1| ABC transporter permease protein [Bacillus pseudomycoides DSM
12442]
gi|228769841|gb|EEM18427.1| ABC transporter permease protein [Bacillus pseudomycoides DSM
12442]
Length = 385
Score = 54.0 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/240 (9%), Positives = 69/240 (28%), Gaps = 10/240 (4%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A +F+++ S ++ +G++IGV A+I ++S+ +G +++
Sbjct: 1 MALSSIFAHKMR------SILTMLGIIIGVSAIITIISIGDGTNAKFREQIGKEKKDQFS 54
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
V Q + + + D + ++
Sbjct: 55 VNYTTEDYSDMDGKISA---SMYDNVSKISGVQDIYPDVRGKEKVYAGKKELDIDITGVK 111
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
+ + R + + + + + + +
Sbjct: 112 GDYFEDTSRFKLEHGRLFTATDLDKPEHTIVLHKDAFDKLFPSWEEGLYVDIKGTPYKVV 171
Query: 191 VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN 250
+ + + +S + + F +N G+ V + + + +V+ L +
Sbjct: 172 GVYSIKAMMGGMEFKEGAISAENWPVLFG-KNNYDGLTVKIAPGQDKQAVQDAVVKSLND 230
>gi|154499878|ref|ZP_02037916.1| hypothetical protein BACCAP_03535 [Bacteroides capillosus ATCC
29799]
gi|150271476|gb|EDM98733.1| hypothetical protein BACCAP_03535 [Bacteroides capillosus ATCC
29799]
Length = 393
Score = 54.0 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/245 (9%), Positives = 71/245 (28%), Gaps = 7/245 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+I+A + + +F ++ +G++IGV A++V++++++G+ D+ + +
Sbjct: 3 AIIMALDSIREKKGRSF------LTMLGIIIGVTAVLVLVALVSGYNADITAYYEKLGVN 56
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
V + L + ++ V+G + S + +
Sbjct: 57 KVTVDLTWYDTTRAEDVGTLLYEYGNGELSDMVTGVSPSLSTSKTVKHGGSTAEGVTVYF 116
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ F+ + I + S + +
Sbjct: 117 G-SDQFAACNNYTLDTGRDILSYDIENRSQVCVLGSYVADTLFEYADPIGQTVYLNGDPF 175
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ + + + + ++ V V D ++ + +
Sbjct: 176 LVVGTYYQKDGGEEDSMDNMLVVPSSLTRSLLTSDYITSYTVKVDTSDQVDTVIDKLDSY 235
Query: 248 LGNGV 252
L +
Sbjct: 236 LSENI 240
>gi|152974477|ref|YP_001373994.1| hypothetical protein Bcer98_0652 [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152023229|gb|ABS20999.1| protein of unknown function DUF214 [Bacillus cytotoxicus NVH
391-98]
Length = 393
Score = 54.0 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/248 (10%), Positives = 74/248 (29%), Gaps = 10/248 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + +A +F+++ S ++ +G++IGV A+I ++S+ +G E +++
Sbjct: 1 MNTNENIRMALSSIFAHKMR------SVLTMLGIIIGVSAIITIISIGDGTNEKFREQIG 54
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
VL Q +S +
Sbjct: 55 KEKKDQFSVNYMTEDYSDMDGKVSA---SMYDNVLKISGVQDVYPDVSGKEKVYAGKEEL 111
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
N D + + + R ++ ++ + S + + +
Sbjct: 112 NLDIIGAKGDYFEDSSKFHLEHGRFLTASDLDRPEHSIMLNKEAFHKLFSSWKPNLYIDI 171
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ +S++ + F +N GI V + + +
Sbjct: 172 KGTPYKVVGVYSKESMMGGMKFKEGIISVENWPILFG-KNNYDGITVKIDPAQDKQTVQD 230
Query: 243 NIVRILGN 250
+++ L +
Sbjct: 231 AVIKSLND 238
>gi|319952135|ref|YP_004163402.1| hypothetical protein Celal_0565 [Cellulophaga algicola DSM 14237]
gi|319420795|gb|ADV47904.1| protein of unknown function DUF214 [Cellulophaga algicola DSM
14237]
Length = 413
Score = 54.0 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 45/271 (16%), Positives = 92/271 (33%), Gaps = 7/271 (2%)
Query: 5 SRFEVIVAWRYLFSN-RKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
E +A R KN+ + I+ + I ++ +++ ++ +G ++ + ++V
Sbjct: 1 MNLEYFIAKRLSAGKGHKNSISAPIIKIAIAAITISIVMMLIAIATGDGLKKKIREKVAA 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFI--PDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
NGH+ I D + L+ P+ + QA S + V GI
Sbjct: 61 FNGHIQISNFDNNRSDVSVVPVFLEQDFYPEFKNITGIKHIQAVASKGGIVRTEETVEGI 120
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKI---NILSPYGDVT 178
N V G + L +L + LS +
Sbjct: 121 LAKGVGKDYNWDVFKEYLVDGRLPDFSGERTDEVLISSLLANKLKLKLGDTFLSVFLRDN 180
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAI 237
+ ++G++ F ++D V+M ++ Q E N + E+F+ D D+I
Sbjct: 181 DPSKMPNQQKSKIVGIYDSGFEEFDATYVFMDIRHIQRMNKWEDNQIGNFEIFLDDFDSI 240
Query: 238 EKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
++ I + + + Y F
Sbjct: 241 DEKSIEIYGQTLSTLDTRTIKDNYGHIFQWI 271
>gi|260881510|ref|ZP_05404583.2| macrolide export ATP-binding/permease protein MacB [Mitsuokella
multacida DSM 20544]
gi|260848625|gb|EEX68632.1| macrolide export ATP-binding/permease protein MacB [Mitsuokella
multacida DSM 20544]
Length = 405
Score = 54.0 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/259 (13%), Positives = 77/259 (29%), Gaps = 12/259 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + ++A L +N+ S ++ +GV+IGV A+I ++SV G R +
Sbjct: 1 MLFKECFVMAINALLANKMR------SLLTMLGVIIGVAAVIALVSVGMGVRTGITSNFE 54
Query: 63 GINGHVVIQQKYYPLVDYQF----IANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
+ + + L + Q +SS V
Sbjct: 55 SLGANTITIMPGSSNRGGPRGAAGSMQTLKYDDAKAIEAKIKDIQYVSPTVSSSYQVVNG 114
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK--INILSPYGD 176
N+ + + + ++ + K + + + +P G
Sbjct: 115 NQNWNTSVTGVTPDLMQIRSLTVDNGSFISKEDMTKRNRVAVIGATVAENLFGTENPVGK 174
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
+ + F + ++Y+ L AQ V I + D
Sbjct: 175 NIRIKNQPFKVIGILASKGSSGFGQDQDDVIYIPLTTAQERMMGITYVQSISLQATDTQK 234
Query: 237 IEKTHENIVRILGNGVVVI 255
I++ + I +L +
Sbjct: 235 IDQVQDEITTLLRQRHRIT 253
>gi|149924688|ref|ZP_01913038.1| hypothetical protein PPSIR1_10090 [Plesiocystis pacifica SIR-1]
gi|149814445|gb|EDM74036.1| hypothetical protein PPSIR1_10090 [Plesiocystis pacifica SIR-1]
Length = 767
Score = 54.0 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/161 (20%), Positives = 62/161 (38%), Gaps = 41/161 (25%)
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+++G++LA L + +G ++ +++P G +TP G + V G+F +YD VY
Sbjct: 465 PILLGRELANELAVGLGARVQLITPVGRLTPAGRVPGILASKVGGIFHSGMYEYDRKNVY 524
Query: 209 MSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN------------------ 250
L AQ + + ++GIEV + D DAI+ + +L
Sbjct: 525 TQLPVAQAFLRTGDRITGIEVKLHDVDAIDGGKAAVEALLREQGRSAPYLERTVTALISL 584
Query: 251 -----------------------GVVVIDWQQRYQIFFSCY 268
++V W++ + FS
Sbjct: 585 VEDPQQREALHAELGIDVDAADGQLIVESWKELNRNLFSAM 625
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 20/92 (21%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 23 AFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH-VVIQQKYYPLVDYQ 81
++ + I + V++G MAL+VV+S+M+G D+ ++L H + DY+
Sbjct: 97 RVFNLLATIITMSVLLGCMALVVVLSLMSGLEVDLRDKILNQKAHLRISGANGNRFTDYE 156
Query: 82 FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGG 113
+ + + +P+V P++ + V +
Sbjct: 157 ALTDAISELPEVAGASPYLEAEIMVRSGINRQ 188
>gi|122064313|sp|Q2YRG7|MACB_BRUA2 RecName: Full=Macrolide export ATP-binding/permease protein MacB
Length = 646
Score = 54.0 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/248 (12%), Positives = 72/248 (29%), Gaps = 7/248 (2%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A L +N + ++ +G++IGV +++ ++++ G + ++ R+ + ++
Sbjct: 260 KMALHALRAN------IFRTVLTLLGIIIGVSSVVTMLAIGTGAQNTILDRINAMGTDLI 313
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ + L + A + + +
Sbjct: 314 LVRPAMAGFRGSGSIATLVPQDADAILELPNVKSAVPEVTGTVTLRRGNVDYQSQANGTV 373
Query: 130 QNSFSRFYGNVS-NDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
S + + + + + +P GD +
Sbjct: 374 PAFSSEIVESRQRQLHHPERYRYLRPCGWLGTTVVKTLFPDGGNPVGDYILIQKIPFQII 433
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
T+ + +V + L L + V I V VKD I+ T I +L
Sbjct: 434 GTLEPKGAGFGGSDQDDVVVVPLSTGNLRLFGQKYVRSITVQVKDSSLIDTTQNQIQSLL 493
Query: 249 GNGVVVID 256
D
Sbjct: 494 DQRHKKRD 501
>gi|27469323|ref|NP_765960.1| hypothetical protein SE2405 [Staphylococcus epidermidis ATCC 12228]
gi|57865969|ref|YP_187616.1| ABC transporter, permease protein [Staphylococcus epidermidis
RP62A]
gi|251811349|ref|ZP_04825822.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus epidermidis BCM-HMP0060]
gi|282874706|ref|ZP_06283585.1| efflux ABC transporter, permease protein [Staphylococcus
epidermidis SK135]
gi|27316873|gb|AAO06048.1|AE016752_81 BacI [Staphylococcus epidermidis ATCC 12228]
gi|57636627|gb|AAW53415.1| ABC transporter, permease protein [Staphylococcus epidermidis
RP62A]
gi|251805098|gb|EES57755.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus epidermidis BCM-HMP0060]
gi|281296422|gb|EFA88937.1| efflux ABC transporter, permease protein [Staphylococcus
epidermidis SK135]
gi|329735778|gb|EGG72059.1| efflux ABC transporter, permease protein [Staphylococcus
epidermidis VCU028]
gi|329736067|gb|EGG72340.1| efflux ABC transporter, permease protein [Staphylococcus
epidermidis VCU045]
Length = 398
Score = 54.0 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/249 (12%), Positives = 77/249 (30%), Gaps = 7/249 (2%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M+ FS + VA R + N++ + IG++IG+ ++I +MS+ NGF++ ++
Sbjct: 1 MNNFSNV-ISVAIRSILKNKRRN------IFTMIGIIIGIASVITIMSLGNGFKKSTTEQ 53
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
Y + + N D+ V ++ + +
Sbjct: 54 FNDAGAGKNQASISYMTENMEAPKNNPFKQEDMSVVEQVNGVKSAKVKEDKDSTYSVKIT 113
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
++ + + + +A N + +
Sbjct: 114 NTHGSSDASLKKVDKLTDVDEGKGFTNDDNEVLEKVAVIDKKIAKKVFNNQAMGQSIYIN 173
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G G + + ++ + S + NL + + V V+ +
Sbjct: 174 GEGFKVVGVSESSEVDESGMPIESLIQIPSKTFNKYMGNLTQGMPQLLVTVEKGSDKKDV 233
Query: 241 HENIVRILG 249
+ + ++L
Sbjct: 234 GKKVEKVLN 242
>gi|20089338|ref|NP_615413.1| hypothetical protein MA0447 [Methanosarcina acetivorans C2A]
gi|19914229|gb|AAM03893.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 403
Score = 54.0 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/246 (16%), Positives = 86/246 (34%), Gaps = 8/246 (3%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A + S + S ++ +G++IGV A+I +S+ F + V + + +
Sbjct: 9 KIALGSIKSAKMR------STLTVLGIVIGVAAVIANVSLGASFNQHFTNEVSNLGSNFI 62
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
Q P + Y ++ P + V P + QA S ++V G+ +
Sbjct: 63 YIQGMQPKLFYDNQLKIVENTPGISGVSP-LKSQAAEVTYMSETKSIMVSGVGEAYDEVA 121
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
+ ND + +S+ + I++ G+ + + K
Sbjct: 122 NTQIGKGTFINDNDRYVAIVGYDIANEKFGRNLSVRNSIDMTFRVGEDEKITKTFKVKGI 181
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
M DN + + + ++ G+ +DP AI++T + + R L
Sbjct: 182 IQNPENTMVQAYNDNEAILIPIDVMNEILGEKD-YGGVFAMAEDPAAIQETSDEVDRRLA 240
Query: 250 NGVVVI 255
+
Sbjct: 241 RSFGIS 246
>gi|167646940|ref|YP_001684603.1| hypothetical protein Caul_2978 [Caulobacter sp. K31]
gi|167349370|gb|ABZ72105.1| protein of unknown function DUF214 [Caulobacter sp. K31]
Length = 419
Score = 54.0 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/287 (13%), Positives = 88/287 (30%), Gaps = 29/287 (10%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
MS+ S VA +L + + ++ +GV IGV + V +M G ++D I+
Sbjct: 1 MSLTSSVLGEVALAHLRVRARQ------TLVAMLGVAIGVGFFLAVSGMMVGSQKDFIRT 54
Query: 61 VLGINGHVVIQQKYYPLVDY------------------QFIANRLDFIPDVIKVLPFVSG 102
++ H+++ + Q L P ++ + G
Sbjct: 55 LIDSTPHIIVHDEQRAPTRQPVLDAFPEAAVSIRGLRPQEEVRGLKDWPAMLVDARAIPG 114
Query: 103 QAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVII---GKDLARN 159
L+ + + + + + G + L +
Sbjct: 115 SLAAPSLTGAVTIAYAGRTAAVALNGVDPRIEGRLAKIDESLVGGVLADLEARPDGLIIS 174
Query: 160 LGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFN 219
++ ++ P G R + ++ + + Y L+ AQ+ F+
Sbjct: 175 RPLADRLGAHMGDTLVVTAPAGALQRMRILALIEPDAQAGFYAGDTVAYGLLRTAQVLFS 234
Query: 220 LENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFS 266
N V+ I + + D + + G WQ+R +
Sbjct: 235 RPNIVNQIHIRLAQSDQAQIQATRLETRWG--YKWESWQERSADILN 279
>gi|189501535|ref|YP_001957252.1| hypothetical protein Aasi_0074 [Candidatus Amoebophilus asiaticus
5a2]
gi|189496976|gb|ACE05523.1| protein of unknown function DUF214 [Candidatus Amoebophilus
asiaticus 5a2]
Length = 405
Score = 54.0 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/262 (12%), Positives = 82/262 (31%), Gaps = 2/262 (0%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A R +N+K AF ++A I + V +G+ L++ V+NGF++++ +++ G
Sbjct: 4 AFFIARRIRKANKK-AFTTLAQRIGMLSVALGLAILLLAFLVINGFQKNVEEKLTSFQGQ 62
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + + + +
Sbjct: 63 YQVFKYSLSRSIEEPPIPTSKVQGIQEAFPNHIKSIQAFIHKTVLIQSKENLEGIILKGV 122
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
Q ++ F + + + + + R +
Sbjct: 123 EPQAKYAPFTHYLVAGNLMTPRQSKYNHEIVLSTTTAAKLNVQIGDQVTICILQETPRYR 182
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTHENIVR 246
V+G++ D + ++ Q N + V G ++F+K+P + +
Sbjct: 183 KLKVVGLYTTHLEGLDEKIALCDIKLLQHLNNWPDNLVGGYDIFLKEPHHNTLLTDKFLD 242
Query: 247 ILGNGVVVIDWQQRYQIFFSCY 268
LG + V + +Q Y +
Sbjct: 243 WLGYDLDVKNIEQAYPAIYDWL 264
>gi|297543791|ref|YP_003676093.1| protein of unknown function DUF214 [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296841566|gb|ADH60082.1| protein of unknown function DUF214 [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 391
Score = 54.0 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/239 (13%), Positives = 80/239 (33%), Gaps = 11/239 (4%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A R + SN+ +F ++ +G++IGV A+I ++S+ G + ++ + +++
Sbjct: 8 KIALRSVLSNKMRSF------LTMLGIVIGVTAVIALVSIGQGSTRSVTSQIQSMGSNLI 61
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ + ++ + D + + G + V ++ + Y
Sbjct: 62 MVNIRGRGRESSLTYDQAIALGDSNHIAAISPVISTSVTAMYGDNSVDNTTVNGVNGDYQ 121
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
+G L G ++ ++ + T G
Sbjct: 122 SIRNIEVAVGRFILPMDDEGRNKVAVL----GSNVASELFGFTDPLGKTIKLNGQNFTVV 177
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+L D+ +++ L+ YF ++ I + P+ +E I L
Sbjct: 178 GILSQKGSSIAGSDDDSIFIPLKTM-FYFAKNKDITQIYIEATSPNTVELAKNEITSKL 235
>gi|238019109|ref|ZP_04599535.1| hypothetical protein VEIDISOL_00971 [Veillonella dispar ATCC 17748]
gi|237864364|gb|EEP65654.1| hypothetical protein VEIDISOL_00971 [Veillonella dispar ATCC 17748]
Length = 403
Score = 54.0 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/259 (15%), Positives = 98/259 (37%), Gaps = 13/259 (5%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ ++AW L +N+ S ++ +G++IGV A+I ++S+ NG ++D+ +
Sbjct: 1 MYKESFLMAWASLIANKMR------SILTMLGIIIGVAAVIALVSIGNGVKQDIQNSISS 54
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ ++++ P + V + +V +
Sbjct: 55 LGSNLLMVMPGAPRTPGVRPSAGSMKSLKVSDYEAISKLDGVKAASPMTNGSYVVIYQNK 114
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + Y +V+N + + K++ +++ K + + +GD P+G
Sbjct: 115 NWTTSVSGVSYN-YLDVNNWSMKSGRFLSEKNVQNRERVAVVGKTVVKNLFGDEDPVGAE 173
Query: 184 IRSKSYTVLGMFRMR------FPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
IR K+ + + + + MV + A + + I V KD + I
Sbjct: 174 IRVKNIPFRIIGVLNSKGSGAMGNDQDDMVVIPYTTAMERVEGVDYLRMIYVVGKDENGI 233
Query: 238 EKTHENIVRILGNGVVVID 256
++ +I +L + D
Sbjct: 234 DRLQSDIENLLRVRHGIKD 252
>gi|225019410|ref|ZP_03708602.1| hypothetical protein CLOSTMETH_03363 [Clostridium methylpentosum
DSM 5476]
gi|224947827|gb|EEG29036.1| hypothetical protein CLOSTMETH_03363 [Clostridium methylpentosum
DSM 5476]
Length = 389
Score = 53.6 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/254 (11%), Positives = 79/254 (31%), Gaps = 8/254 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ + R +F R S ++ G+ IGV++++V+ S+ + + + L G
Sbjct: 3 ALRTSLRNIFRKRLR------SVLTIAGIAIGVLSVVVITSIGD-IGKRTVNSELDSIGI 55
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
I + ++ V +P ++ ++ ++ + +
Sbjct: 56 GGIAISAKEASVGDAQLSLIESDEMVTDCMPVLAKYTTAEIHNTETKSMVFGINTQAKQM 115
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
N S+ + ++ + A+ ++ T + +
Sbjct: 116 VSLEVLHGRMINQSDLQANARVCVVDESYAKATYKRSNIVGKTINVLLGETYQPLEVVGV 175
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ + + +Y +Y Q + I V +K+ E+ + +V
Sbjct: 176 VASGGNVLQNLMGEYIPCFIYAPYTTVQTAYGTTG-YDQIMVKLKEGADSEQVSDALVAK 234
Query: 248 LGNGVVVIDWQQRY 261
L + Q +
Sbjct: 235 LETSLSSGSVQVQN 248
>gi|167770642|ref|ZP_02442695.1| hypothetical protein ANACOL_01988 [Anaerotruncus colihominis DSM
17241]
gi|167667237|gb|EDS11367.1| hypothetical protein ANACOL_01988 [Anaerotruncus colihominis DSM
17241]
Length = 396
Score = 53.6 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/245 (13%), Positives = 78/245 (31%), Gaps = 10/245 (4%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ + R L R +F++IAS + IGV +++++ S+ ++ + + +
Sbjct: 5 SFVCSLRNLGRKRFRSFLTIAS------IAIGVASVVLIGSIGEIGKQTISDELNSLGLG 58
Query: 68 VVI---QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ QK+ Q + +P V P V + + + +L
Sbjct: 59 SLTVSADQKFTRQKMDQRDLELIRNLPTVKSATPVVVDFSSIRMRGLVANAMLWGVDCEG 118
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
D N ++ +I ++A+ L + + + I
Sbjct: 119 DQLISLKPQHGRLLNEADIAGASDVCVIDANVAQMFYKRDNIVGKYLDAMIGGSYVRLEI 178
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + + + D Y+ Q Y + A I V + D + E +
Sbjct: 179 IGVAASGGNILQTMVGDVIPSFAYVPYTTIQRYTG-DQAFEQIAVTLHDDSNSDAVAEQL 237
Query: 245 VRILG 249
+
Sbjct: 238 TASVN 242
>gi|289548309|ref|YP_003473297.1| hypothetical protein Thal_0536 [Thermocrinis albus DSM 14484]
gi|289181926|gb|ADC89170.1| protein of unknown function DUF214 [Thermocrinis albus DSM 14484]
Length = 406
Score = 53.6 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/268 (14%), Positives = 84/268 (31%), Gaps = 19/268 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A++ + ++ + +S+ + A +V+ S+M GF+ I++V+ I+ HV
Sbjct: 5 FFLAYKLMVERKRQSIVSLMGVVVGF------AAFVVMSSIMFGFQGYFIQQVVDIDAHV 58
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
I+ + I + K + + + +
Sbjct: 59 RIKAREEKRRYEGDIPTLVLGEEVQKKDRLIGWKELIERIRKDPEVEGVAPHLVSKGILR 118
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ K ++ + L + + ++L V K
Sbjct: 119 YGVREKPVTLIGIDPQLEEKASVLKRFLRGKGLEEMKKRKDVLIVGALVARDLGVAEGKK 178
Query: 189 -----------YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
V+ + + D+ VY+SL Q V+ + V ++DP
Sbjct: 179 VILSVPEGSVSMVVVDIMDSGITNIDDSRVYISLSALQALLQRPGEVNELVVKLRDPSHA 238
Query: 238 EKTHENIVRILGNGVVVIDWQQRYQIFF 265
EK + V WQ+ Y+ F
Sbjct: 239 EKVARRWKSM--TSYEVESWQKAYRNFL 264
>gi|220932800|ref|YP_002509708.1| ABC-type transport system, involved in lipoprotein release,
permease component [Halothermothrix orenii H 168]
gi|219994110|gb|ACL70713.1| ABC-type transport system, involved in lipoprotein release,
permease component [Halothermothrix orenii H 168]
Length = 400
Score = 53.6 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 41/261 (15%), Positives = 82/261 (31%), Gaps = 20/261 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMI-GVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR + N++ + + +G++I GVM L +V + + + NGH
Sbjct: 2 IKIAWRNILRNKRRSLL-------ILGIIIFGVMVLFLVKGYFAATYDGLKMMSISRNGH 54
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ I + + Q RL + K + V + V + +
Sbjct: 55 LQIAPEGFWGNTGQE---RLLLTGEYHKAITGVLESVDDVNNFTSELKVSGILGTEKGST 111
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGK-----DLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + + +G + L + + T +
Sbjct: 112 IVSGTGIEPGNSFNQSVMIEEGFNLFPGDRTRVLLGKGVMEKLNLSVDDWFSLMATTLDG 171
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ S V G F + DN + M L AQ N + V + V ++D E+
Sbjct: 172 AYSASSLKVSGSFSTYSAEADNYFIMMPLSFAQNLLNT-DGVDKVIVSLEDTGKTEEVKT 230
Query: 243 NIVRILGN---GVVVIDWQQR 260
+ V + W
Sbjct: 231 RLEEKFEEMGLKVDIKTWLDL 251
>gi|145220347|ref|YP_001131056.1| hypothetical protein Cvib_1544 [Prosthecochloris vibrioformis DSM
265]
gi|145206511|gb|ABP37554.1| protein of unknown function DUF214 [Chlorobium phaeovibrioides DSM
265]
Length = 422
Score = 53.6 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 46/291 (15%), Positives = 87/291 (29%), Gaps = 37/291 (12%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +A R+L R+ ++ GV + M LI +S+ G + I+ ++
Sbjct: 1 MLQTL-FTIARRHLIGRRRQTLTTVI------GVAVSTMVLITTISLTRGLLDSFIETIV 53
Query: 63 GINGH---------------------VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVS 101
+ H + + R + P
Sbjct: 54 NVAPHSTLKGEKTDPVPVNVLALSQPETASFVVDNIEKLEREEVRNYRQVLSLLASPVYK 113
Query: 102 GQAFVSGLSSGGSGVLVRGISNSDF--SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARN 159
G+ + + V+G N + +S G + K
Sbjct: 114 GEVLAASPFVASQVMAVKGNRNEPILLKGVDIDRENVITGISGKLTSGDVGLFAKTANGL 173
Query: 160 LGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFN 219
L + L +VT + +S+ V G+F D VY SL+ Q+
Sbjct: 174 LVGRTVAREMNLQLNDEVTLIPASGKSRQCKVSGIFFSGVNAID-NSVYASLKLGQIVEG 232
Query: 220 L-ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQ---IFFS 266
+ + VSGI + V+ P + + + G + WQ+ F
Sbjct: 233 MAADRVSGIALKVRYPLENGDLNRELQEV--TGYRCVTWQEENAGVLSLFR 281
>gi|150403573|ref|YP_001330867.1| hypothetical protein MmarC7_1658 [Methanococcus maripaludis C7]
gi|150034603|gb|ABR66716.1| protein of unknown function DUF214 [Methanococcus maripaludis C7]
Length = 397
Score = 53.6 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 42/269 (15%), Positives = 89/269 (33%), Gaps = 16/269 (5%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + A R + + S ++ IG++IG++A++ ++S+ G + + +
Sbjct: 1 MKLNDIVSF--AGRNITQKKTQ------SLLTIIGIVIGILAIVSLISLGYGVQNYITEE 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ V+ IA +F +K + V G V GG+ V
Sbjct: 53 ISKAGASVITVYPS---QQLTSIAMSKNFNDRDLKAVEGVRGVDVVLYGWFGGTLVTYND 109
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ S + + KD + +
Sbjct: 110 QDYYSSVFATKSSTYQIFFTEAYGYELEQGRWMKDSDTYTCVIGNSLAHETFDREIGIGD 169
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ I K Y V+G+ D+ + + + A F++ + + V V+D + + K
Sbjct: 170 KIEINDKKYKVVGILDQIGNPDDDNSIVIPYEAASEVFDVTDEYNMFMVKVRDGEDVVKV 229
Query: 241 HENIVRILGN-----GVVVIDWQQRYQIF 264
E+I L + V+ +Q +
Sbjct: 230 SEDIKSELEDSRGDENFSVLTSEQLAESI 258
>gi|329724176|gb|EGG60694.1| efflux ABC transporter, permease protein [Staphylococcus
epidermidis VCU144]
Length = 398
Score = 53.6 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/249 (12%), Positives = 77/249 (30%), Gaps = 7/249 (2%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M+ FS + VA R + N++ + IG++IG+ ++I +MS+ NGF++ ++
Sbjct: 1 MNNFSNV-ISVAIRSILKNKRRN------IFTMIGIIIGIASVITIMSLGNGFKKSTTEQ 53
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
Y + + N D+ V ++ + +
Sbjct: 54 FNDAGAGKNQASISYMTENMEAPKNNPFKQEDMSVVEQVNGVKSAKVKEDKDSTYSVKIT 113
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
++ + + + +A N + +
Sbjct: 114 NTHGSSDASLKKVDKLTDVDEGKGFTNDDNEVLEKVAVIDKKIAKKVFNNQAMGQSIYIN 173
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G G + + ++ + S + NL + + V V+ +
Sbjct: 174 GEGFKVVGVSESSEVDESGMPIESLIQIPSKTFNKYMDNLTQGMPQLLVTVEKGSDKKDV 233
Query: 241 HENIVRILG 249
+ + ++L
Sbjct: 234 GKKVEKVLN 242
>gi|153838248|ref|ZP_01990915.1| ABC-type transport system, involved in lipoprotein release,
permease component [Vibrio parahaemolyticus AQ3810]
gi|149748380|gb|EDM59239.1| ABC-type transport system, involved in lipoprotein release,
permease component [Vibrio parahaemolyticus AQ3810]
Length = 422
Score = 53.6 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 49/284 (17%), Positives = 86/284 (30%), Gaps = 28/284 (9%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M V +AW L NR+ S +S + + I V AL + + +
Sbjct: 1 MGKLIPVSVRLAWLNLQRNRRR------SLLSMLIIAIAVFALTSAGGFGLYTYDSLKES 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIA-----------NRLDFIPDVIKVLPFVSGQAFVSGL 109
GH+ + Y + + +L + +V V P V +S
Sbjct: 55 TARDTGHLTLTTPGYFAKEEEMPLSNGLSHADEITKQLIGLSEVRGVQPRVEFSGLISNG 114
Query: 110 SSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN 169
S + + R +SN + + S
Sbjct: 115 SKSSIFIGIGVNEREFDMKGPFLDVRDGQTLSNIHASRYDASEPEVMLGVDLASNLSVNV 174
Query: 170 ILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV 229
T + + + V G++ P+ D +Y+ + AQ + VS + V
Sbjct: 175 GDWITLLATTTDGALNAYDFKVRGIYSTGVPELDKRQLYVHINSAQSLLG-SDKVSALSV 233
Query: 230 FVKDPDAIEKTHENIVRILG--------NGVVVIDWQQRYQIFF 265
F+ D K + + IL V + WQ+R FF
Sbjct: 234 FLFDTSLTNKVEQQVATILNKQKPSFGDQEVEITPWQER--AFF 275
>gi|262191322|ref|ZP_06049515.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
cholerae CT 5369-93]
gi|262032818|gb|EEY51363.1| lipoprotein releasing system transmembrane protein LolE [Vibrio
cholerae CT 5369-93]
Length = 344
Score = 53.6 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 72/191 (37%), Gaps = 1/191 (0%)
Query: 79 DYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYG 138
+ + + P ++ P+V A + + + + + + S
Sbjct: 7 RWPDLMAQAARHPQIVAAAPYVKITALAESGTQLKAIEVRGVDPQREQAVSRLSQFITAQ 66
Query: 139 NVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMR 198
+ VI+G+ +A LG+ +GD I ++ P + + +
Sbjct: 67 AWQEFRPGQQQVILGQGVAEKLGVQVGDFITLMIPSATSGDK-VQAPKRVRVKVSGLLAL 125
Query: 199 FPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQ 258
D+ + + L++AQ+Y +L + V+GI V V D + ++ L V + WQ
Sbjct: 126 NGQIDHSLALLPLEDAQVYAHLGSGVTGISVKVADVLQATQIVRDVGNQLSEYVYLHSWQ 185
Query: 259 QRYQIFFSCYE 269
Q+Y + +
Sbjct: 186 QKYGFLYRDIQ 196
>gi|289577479|ref|YP_003476106.1| hypothetical protein Thit_0219 [Thermoanaerobacter italicus Ab9]
gi|289527192|gb|ADD01544.1| protein of unknown function DUF214 [Thermoanaerobacter italicus
Ab9]
Length = 391
Score = 53.6 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/239 (13%), Positives = 80/239 (33%), Gaps = 11/239 (4%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A R + SN+ +F ++ +G++IGV A+I ++S+ G + ++ + +++
Sbjct: 8 KIALRSVLSNKMRSF------LTMLGIIIGVTAVIALVSIGQGSTRSVTSQIQSMGSNLI 61
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ + ++ + D + + G + V ++ + Y
Sbjct: 62 MVNVMGRGGESSLTYDQAIVLKDSNFIAAISPVISTSVTAMYGNNSVDNTTVNGVNGDYQ 121
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
+ +G L G ++ ++ + T G
Sbjct: 122 SIRDIQVAAGRFILPMDDEGRNRVAVL----GSNVARELFGFTDPIGKTIKLNGQNFTVV 177
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+L D+ +++ L+ YF + I + PD +E I L
Sbjct: 178 GILSQKGSSIAGSDDDSIFIPLKTM-FYFAKNRDIRQIYIEATSPDTVELAKNEINSKL 235
>gi|298675865|ref|YP_003727615.1| hypothetical protein Metev_1990 [Methanohalobium evestigatum
Z-7303]
gi|298288853|gb|ADI74819.1| protein of unknown function DUF214 [Methanohalobium evestigatum
Z-7303]
Length = 404
Score = 53.6 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/254 (12%), Positives = 80/254 (31%), Gaps = 8/254 (3%)
Query: 3 IFSRFE-VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+ + E +A + S++ S ++ +G++IGV A+I +S+ F + V
Sbjct: 1 MLNPLEAFRIAIGSISSSKLR------SALTTLGIIIGVAAVIANVSLGASFGQYFDDEV 54
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ ++ + + ++ + P V+ V P V V +S +
Sbjct: 55 GAAGNNFILIEGQDVNIFHENELETIKRTPGVVGVSPVVQQSGQVQYMSGTRQVNVQGVT 114
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ + N + + + + + G + D + L
Sbjct: 115 EDYEEVANFNMAAGNFLSDKDKYSAVIGEDVSTDKFDKDISNRNSIDITLRRNDGTEVTQ 174
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
G ++ + +++ + E G V + +++ +
Sbjct: 175 TFKVKGIIKSPGTTFLQSGIEPDERIFIPISTMNEMLGRE-YYGGFFVQATNLESVGEVS 233
Query: 242 ENIVRILGNGVVVI 255
E I L + V
Sbjct: 234 EEIDGRLARSLGVS 247
>gi|224588153|gb|ACN58777.1| macrolide export ATP-binding/permease protein macB [uncultured
bacterium BLR8]
Length = 665
Score = 53.6 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 40/256 (15%), Positives = 88/256 (34%), Gaps = 15/256 (5%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A R L +N S ++ +G++IGV ++I ++++ +G ++ +I R+ + ++++
Sbjct: 279 ALRALKAN------VFRSILTLLGIVIGVASVIAMLAIGDGAKQAVIDRISAMGSNLLLV 332
Query: 72 QKYYPLVDYQFIANRLD------FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+ P L +V VL V Q + L G + S
Sbjct: 333 RPGAPNQRGFNGTATLVLADVKAIDEEVPNVLAAVPEQQSNATLRYEGRDYSTQVNGTSA 392
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
L + G+ + D + ++ + G + I
Sbjct: 393 KFPLARQWKVAKGSFFTEDDEEDYATVAV---LGRTVADALFPDGEDALGKFVVVNNVIF 449
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ + +V++ +QL + + + V V D I+ T +
Sbjct: 450 QVIGVMSVRGASPIGQDQDDVVFVPYATSQLRLSGQRFLRNATVAVNDVTRIDATQSAME 509
Query: 246 RILGNGVVVIDWQQRY 261
+L +D+Q R
Sbjct: 510 SLLAERHGTVDFQVRN 525
>gi|325261688|ref|ZP_08128426.1| ABC transporter, permease protein [Clostridium sp. D5]
gi|324033142|gb|EGB94419.1| ABC transporter, permease protein [Clostridium sp. D5]
Length = 412
Score = 53.6 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/256 (13%), Positives = 87/256 (33%), Gaps = 18/256 (7%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A + SN+ +F ++ +G++IG+ +++ ++S+ NG ++D++ N V
Sbjct: 9 KMALDNIRSNKGRSF------LTMLGIIIGITSVVTIVSIGNGLKKDVVDASNEQNNTVT 62
Query: 70 IQQK------YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
IQ + + V V + + ++ + +
Sbjct: 63 IQANTDEVSDPNCITGEDISFLKTSLSDSVQSVSGYTATLGSITTRKGKFDAYVGLTTPD 122
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGI------SIGDKINILSPYGDV 177
+ + Q+ + ND V + +L + ++ + S +V
Sbjct: 123 YENAQYQDPLVKGSYFTDNDVANANKVCVINELTAIYLFGNTDVVGMTIELQVDSSIQNV 182
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
+G+ ++ + + + M + A S I + D D
Sbjct: 183 NIIGIRETTQEMMEAEKQYIAMGMDKSISLEMPYTVSTDLGTPVEAFSSISITAYDKDQA 242
Query: 238 EKTHENIVRILGNGVV 253
+ ++ V+IL +
Sbjct: 243 ARIAKSAVQILNSRHQ 258
>gi|85710489|ref|ZP_01041553.1| hypothetical protein NAP1_08767 [Erythrobacter sp. NAP1]
gi|85687667|gb|EAQ27672.1| hypothetical protein NAP1_08767 [Erythrobacter sp. NAP1]
Length = 398
Score = 53.6 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/268 (13%), Positives = 89/268 (33%), Gaps = 20/268 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK--RVLGING 66
++A R + + S ++ +G++IGV A++ ++++ NG + LG +
Sbjct: 6 FLLALREIRRHLMR------SILTTLGIIIGVAAVVTMVTLGNGVTASVQDEISSLGSSN 59
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
+V + QF + ++ + I + + S + ++ +D
Sbjct: 60 FIVFPVRVDNGPVRQFDLDDVEAVEQQIAGVEVAAANVGASATAFYNGQDWDTRVTGADT 119
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
++L+ F + + + +SP G+ +G +
Sbjct: 120 NFLEAQAIEVVEGRP--FTSDEEASGQNVCLLGPKVREAIFLPDVSPIGEEMRLGDVPCT 177
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ + D+ V+M L+ Q F + + + + ++++
Sbjct: 178 VIGVLEERGQGGGGADDDDTVFMPLKTVQRRFRGSDNIDYFVLKYNAAYSATVIQDSLID 237
Query: 247 IL----------GNGVVVIDWQQRYQIF 264
+L N +ID Q
Sbjct: 238 LLRERRVLQGDAPNDFNIIDTAQVNDAL 265
>gi|203284004|ref|YP_002221744.1| lipoprotein releasing system, permease protein, putative [Borrelia
duttonii Ly]
gi|201083447|gb|ACH93038.1| lipoprotein releasing system, permease protein, putative [Borrelia
duttonii Ly]
Length = 416
Score = 53.6 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/242 (14%), Positives = 87/242 (35%), Gaps = 5/242 (2%)
Query: 28 ASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRL 87
+ + + +++G + +I+ +S+MNGF+ D + + + N +
Sbjct: 21 LTIVIILSIVLGQIIIIITISIMNGFQNDFFTSIS----TLESGNLKIENKLNEQEFNSI 76
Query: 88 DFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRG 147
+ ++I++ Q S + + D +N S
Sbjct: 77 KKMKEIIQINKIYETQGIGIENYYYPSILNIIAFDTKDVINDKNFLLLTGLTASQIQLNE 136
Query: 148 KGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMV 207
+IIG L+ NL + GD I ++ + K + + +F+ + + V
Sbjct: 137 DEIIIGDVLSYNLDLYAGDTIGLILNDEITNLHTLKNEVKQFKIKAIFKSNYSKINQSTV 196
Query: 208 YMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSC 267
+M++ +++ +V K+ +K I + + + + W + + F+
Sbjct: 197 FMNINYFYTKQLIKDIDINYQVKTKNLYPSKKLINAI-KNINQKIKIKPWHEYNKEFYKA 255
Query: 268 YE 269
+
Sbjct: 256 LK 257
>gi|269120683|ref|YP_003308860.1| hypothetical protein Sterm_2074 [Sebaldella termitidis ATCC 33386]
gi|268614561|gb|ACZ08929.1| protein of unknown function DUF214 [Sebaldella termitidis ATCC
33386]
Length = 405
Score = 53.6 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 41/253 (16%), Positives = 90/253 (35%), Gaps = 16/253 (6%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR-------V 61
+ +A+ L S + +F ++ +G++IG+ A+I++ ++ G ++ ++
Sbjct: 7 LKMAFSNLLSYKMRSF------LTMLGIIIGISAVILMSAIGAGAQDKIVGDLNKLGIGN 60
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
++ I Q + + I V V P + + + S G+ ++ G+
Sbjct: 61 FDVSIDNSIDNIKNRNRLQQKHIDMITNISGVESVAPTGTVRHRIEMSSGFGNFSIITGV 120
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKI--NILSPYGDVTP 179
+ F+ + S ++ + I D+ + I D+
Sbjct: 121 VPASFNIENTQLLKGRYFNSEEYRKTGYFAIVDDVTTARIFGDESPLGQKITIRIKDLGN 180
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIE 238
I S + F + + Q Q L+ SGI+V V DP+ +
Sbjct: 181 KDYVIVGVSKNPVASMTGIFGGNSPSFILIPYQNYQYISKLDEKYYSGIKVKVSDPNELS 240
Query: 239 KTHENIVRILGNG 251
+ +N IL
Sbjct: 241 QIMDNTTNILNKE 253
>gi|228996098|ref|ZP_04155750.1| ABC transporter permease protein [Bacillus mycoides Rock3-17]
gi|229003713|ref|ZP_04161525.1| ABC transporter permease protein [Bacillus mycoides Rock1-4]
gi|228757550|gb|EEM06783.1| ABC transporter permease protein [Bacillus mycoides Rock1-4]
gi|228763665|gb|EEM12560.1| ABC transporter permease protein [Bacillus mycoides Rock3-17]
Length = 385
Score = 53.2 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/240 (9%), Positives = 69/240 (28%), Gaps = 10/240 (4%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A +F+++ S ++ +G++IGV A+I ++S+ +G +++
Sbjct: 1 MALSSIFAHKMR------SILTMLGIIIGVSAIITIISIGDGTNAKFREQIGKEKKDQFS 54
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
V Q + + + D + ++
Sbjct: 55 VNYTTEDYSDMDGKISA---SMYDNVSKISGVQDVYPDVRGKEKVYAGKKELDIDITGVK 111
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
+ + R + + + + + + +
Sbjct: 112 GDYFEDTSRFKLEHGRLFTAADLDKPEHTIVLHKDAFDKLFPSWEEGLYVDIKGTPYKVV 171
Query: 191 VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN 250
+ + +S + + F +N G+ V + + + +V++L +
Sbjct: 172 GVYSIKAMMGGMAFKEGAISAENWPVLFG-KNNYDGLTVKIAPGQDKQTVQDAVVKLLND 230
>gi|257440340|ref|ZP_05616095.1| macrolide export ATP-binding/permease protein MacB
[Faecalibacterium prausnitzii A2-165]
gi|257197186|gb|EEU95470.1| macrolide export ATP-binding/permease protein MacB
[Faecalibacterium prausnitzii A2-165]
Length = 401
Score = 53.2 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/264 (12%), Positives = 82/264 (31%), Gaps = 22/264 (8%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A + ++SN+ F ++ +G++IGVMA+IV++ + NG + M + + +
Sbjct: 9 ALQNVWSNKLRTF------LTMLGIIIGVMAVIVIVGLGNGMTQSMRDSFSALGTNALSI 62
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
Q + + + +++ VS Q S + R ++ +
Sbjct: 63 QVWGYGSRTASVEDVYKIADKNKELISAVSPQIDFSNNTPKVGTTTYRYGTS--VYGVDE 120
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTV 191
++ + + I + + ++ T + + V
Sbjct: 121 HYAEMKNYTLAQGRGLQYMDIKDNKQVCIIGDYLNRAAYGGNAVGQTIKLGAYKFRIVGV 180
Query: 192 LGMFRMRFPDYDNGM---VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
L VY+ A N +A + + + D + + L
Sbjct: 181 LNAKVTDKNMQQGSDDDCVYLPYTTAMRLSNQSSAKNFVAIMT-DESRANEAKAVVESGL 239
Query: 249 ------GNGVVVID---W-QQRYQ 262
N + W ++ +
Sbjct: 240 YDLLKSDNAYYIYSASEWLEEMNE 263
>gi|227824792|ref|ZP_03989624.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|226905291|gb|EEH91209.1| conserved hypothetical protein [Acidaminococcus sp. D21]
Length = 410
Score = 53.2 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/254 (12%), Positives = 92/254 (36%), Gaps = 12/254 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A+ + SN+ F ++ +G++IGV A+I ++S+ G +E + + + + ++
Sbjct: 12 IKMAFEGMLSNKLRTF------LTMLGIIIGVGAVIAMVSLGLGMQEKVKENISSMGSNL 65
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+I + Q IA+ + ++ G N +++
Sbjct: 66 LIVMSGGRTANGQRIASGSGAHLTYDDAKAIEKNVDGIKYVAPGVQSSYQLVAGNQNWNT 125
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ ++ N + + K+L + + + + + + P+G +R
Sbjct: 126 QVQGMTPNIIDIRNYTIKTGRMYTEKELTSRDRVCVIGQTVADNLFPEGDPVGKTVRINK 185
Query: 189 YTV------LGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + +V++ L A + I + ++ + IE+
Sbjct: 186 APFRVVGVLNSKGQSSMGQDQDDVVFVPLTTAMQRLMGITYIRNITIQCENENTIEQVQS 245
Query: 243 NIVRILGNGVVVID 256
++V +L +
Sbjct: 246 DVVTLLRQRHKIRT 259
>gi|320104204|ref|YP_004179795.1| hypothetical protein Isop_2676 [Isosphaera pallida ATCC 43644]
gi|319751486|gb|ADV63246.1| protein of unknown function DUF214 [Isosphaera pallida ATCC
43644]
Length = 486
Score = 53.2 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+++++ WRYL + + S + V +GV +IVV +VM GF E M R+ GI
Sbjct: 2 YKLLLCWRYLRTR-------YIALASIVSVTLGVATMIVVNAVMAGFSEKMRDRLHGILA 54
Query: 67 HVV 69
+V
Sbjct: 55 DIV 57
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-----VSGIEVFVKDPDA 236
+TV+G FR +YD+ MVY+ L+ Q L + V+ I+V V+
Sbjct: 243 PAPGHDRFTVVGFFRSGMSEYDSSMVYVPLERLQYIRVLGDGKGKGAVNQIQVKVRQGAD 302
Query: 237 IEKTHENIVRILGNG---VVVIDWQQRYQIFFSCY 268
+++ + I + L VV W+Q+ +
Sbjct: 303 LDRVAQVIRQALDPHQTFFVVSTWEQKQGPLLAAV 337
>gi|294649285|ref|ZP_06726720.1| macrolide export ATP-binding/permease protein MacB [Acinetobacter
haemolyticus ATCC 19194]
gi|292824838|gb|EFF83606.1| macrolide export ATP-binding/permease protein MacB [Acinetobacter
haemolyticus ATCC 19194]
Length = 663
Score = 53.2 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/263 (13%), Positives = 84/263 (31%), Gaps = 12/263 (4%)
Query: 12 AWRYLFSNRKNAFISIA---------SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
AWR F AF +F++ +G++IG+ +++ V+++ NG ++ +++ +
Sbjct: 259 AWRSFFDRLGEAFRMALLAMNAHRMRTFLTMLGIIIGIASVVSVVALGNGSQKQILENIS 318
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ + + + D + +P L VS ++ + +
Sbjct: 319 SLGTNTITVYQGRGFGDTSRASQVKTLVPADADALAEQPYVDGVSPSANTSVTLRFKDTE 378
Query: 123 NSDFSY-LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM- 180
S + F G + + + + +K V +
Sbjct: 379 ASATVNGVSEDFFYVRGMTFKSGQPFDKAGVTQRAQDVVIDANTEKTFFADGTNPVGQVI 438
Query: 181 -GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+ S+ V+ + D+ VY+ ++ V I V +KD
Sbjct: 439 LLGSVPSRIIGVIEAEKGFMGSSDSLNVYLPYSTVMSRMLGQSNVRSIIVRIKDEYPSTA 498
Query: 240 THENIVRILGNGVVVIDWQQRYQ 262
I+ +L D +
Sbjct: 499 AENAILTLLEQRHGAQDVFTQNS 521
>gi|226952881|ref|ZP_03823345.1| macrolide ABC transporter ATP-binding/membrane protein
[Acinetobacter sp. ATCC 27244]
gi|226836392|gb|EEH68775.1| macrolide ABC transporter ATP-binding/membrane protein
[Acinetobacter sp. ATCC 27244]
Length = 663
Score = 53.2 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/263 (13%), Positives = 84/263 (31%), Gaps = 12/263 (4%)
Query: 12 AWRYLFSNRKNAFISIA---------SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
AWR F AF +F++ +G++IG+ +++ V+++ NG ++ +++ +
Sbjct: 259 AWRSFFDRLGEAFRMALLAMNAHRMRTFLTMLGIIIGIASVVSVVALGNGSQKQILENIS 318
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ + + + D + +P L VS ++ + +
Sbjct: 319 SLGTNTITVYQGRGFGDTSRASQVKTLVPADADALAEQPYVDGVSPSANTSVTLRFKDTE 378
Query: 123 NSDFSY-LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM- 180
S + F G + + + + +K V +
Sbjct: 379 ASATVNGVSEDFFYVRGMTFKSGQPFDKAGVTQRAQDVVIDANTEKTFFADGTNPVGQVI 438
Query: 181 -GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+ S+ V+ + D+ VY+ ++ V I V +KD
Sbjct: 439 LLGSVPSRIIGVIEAEKGFMGSSDSLNVYLPYSTVMSRMLGQSNVRSIIVRIKDEYPSTA 498
Query: 240 THENIVRILGNGVVVIDWQQRYQ 262
I+ +L D +
Sbjct: 499 AENAILTLLEQRHGAQDVFTQNS 521
>gi|297172684|gb|ADI23651.1| ABC-type transport system, involved in lipoprotein release,
permease component [uncultured Gemmatimonadales
bacterium HF4000_15H13]
Length = 195
Score = 53.2 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Query: 221 ENAVSGIEVFVKDPDAIEKTHENIVRILGN-GVVVIDWQQRYQIFFSCYE 269
+V GI V V DP+ + E + LG W+ FS +
Sbjct: 6 PTSVGGIGVRVTDPEIANEVAERVREALGGFPYWAESWKVTNAALFSALK 55
>gi|194333229|ref|YP_002015089.1| hypothetical protein Paes_0385 [Prosthecochloris aestuarii DSM 271]
gi|194311047|gb|ACF45442.1| protein of unknown function DUF214 [Prosthecochloris aestuarii DSM
271]
Length = 422
Score = 53.2 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 40/282 (14%), Positives = 88/282 (31%), Gaps = 36/282 (12%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV- 69
+A R+L R+ + + GV + M LI +S+ G + ++ ++ + H+
Sbjct: 8 IAIRHLAGRRRQ------TITTVTGVAVSTMVLITTISLTRGLLDSFVETIVDVAPHITL 61
Query: 70 -------------------IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLS 110
+ + + + +L + +
Sbjct: 62 KGELVNPLPLNLLDGEAVDRYAFVVENIQKEDRDEVQHYRQILESLLVPPFSREILVSSP 121
Query: 111 SGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLG---ISIGDK 167
S +++ + + L+ +S ++ + +
Sbjct: 122 YVESQIMIINGNRNLPVLLKGVDIDREEGISGLKEKLTEGSVEAFRKTPGALLVGRTVAR 181
Query: 168 INILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSG 226
++ +VT + S+ V G+F D V+ +L+ Q+ L + VSG
Sbjct: 182 DLDIALNDEVTVVPASGPSRQCKVTGIFFSGVNAVD-NSVFATLKFGQIIEGLPADKVSG 240
Query: 227 IEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQI---FF 265
I + V DP ++ RI G WQ+ F
Sbjct: 241 IAMKVSDPLDNGGIAGDLERI--TGYSSATWQEENANVLSLF 280
>gi|203287547|ref|YP_002222562.1| lipoprotein releasing system, permease protein, putative [Borrelia
recurrentis A1]
gi|201084767|gb|ACH94341.1| lipoprotein releasing system, permease protein, putative [Borrelia
recurrentis A1]
Length = 416
Score = 53.2 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/242 (14%), Positives = 87/242 (35%), Gaps = 5/242 (2%)
Query: 28 ASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRL 87
+ + + +++G + +I+ +S+MNGF+ D + + + N +
Sbjct: 21 LTIVIILSIVLGQIIIIITISIMNGFQNDFFTSIS----TLESGNLKIENKLNEQEFNSI 76
Query: 88 DFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRG 147
+ ++I++ Q S + + D +N S
Sbjct: 77 KKMKEIIQINKIYETQGIGIENYYYPSILNIIAFDTKDVINDKNFLLLTGLTASQIQLNE 136
Query: 148 KGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMV 207
+IIG L+ NL + GD I ++ + K + + +F+ + + V
Sbjct: 137 DEIIIGDVLSYNLDLYAGDTIGLILNDEITNLHTLKNEVKQFKIKAIFKSNYSKINQSTV 196
Query: 208 YMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSC 267
+M++ +++ +V K+ +K I + + + + W + + F+
Sbjct: 197 FMNINYFYTKQLIKDIDINYQVKTKNLYPSKKLINAI-KNINQKIKIKPWHEYNKEFYKA 255
Query: 268 YE 269
+
Sbjct: 256 LK 257
>gi|170725791|ref|YP_001759817.1| hypothetical protein Swoo_1430 [Shewanella woodyi ATCC 51908]
gi|169811138|gb|ACA85722.1| protein of unknown function DUF214 [Shewanella woodyi ATCC 51908]
Length = 428
Score = 53.2 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 44/271 (16%), Positives = 93/271 (34%), Gaps = 28/271 (10%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+AWR L+ N+ I +AS ++ G+M ++ +M ++G MI + V
Sbjct: 19 KLAWRNLWRNKIRTGIMLAS------MVFGLMGVVTMMGFLSGMYVSMIDNAIAWQTSDV 72
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI-------- 121
Q L D ++ ++ A+ + + + G R
Sbjct: 73 QVQNRRYLEDPDINEVIVNPAALYSELERLPQVSAYSARVVADGMVASARANRGIRINGV 132
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ +D + + + V++ + A L +S+G K+ + + G
Sbjct: 133 NVTDEAAVTPIAAHIEQGTWLPETGRYPVVVSQKTAERLRLSLGSKVVLTFSDVNKDVTG 192
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK--------D 233
R + +R +D+ +Y+ QE +E V I V + D
Sbjct: 193 AAFRVRGI-----YRSPSSSFDDANLYVRQQELSQLAGVEG-VHEIAVLLDDSQGGDSFD 246
Query: 234 PDAIEKTHENIVRILGNGVVVIDWQQRYQIF 264
+ + + ++ + DWQQ +
Sbjct: 247 NQGAKLVAQALRKVSSTQNQIRDWQQIQPML 277
>gi|71909527|ref|YP_287114.1| hypothetical protein Daro_3916 [Dechloromonas aromatica RCB]
gi|71849148|gb|AAZ48644.1| Protein of unknown function DUF214 [Dechloromonas aromatica RCB]
Length = 402
Score = 53.2 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/271 (13%), Positives = 84/271 (30%), Gaps = 20/271 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+++A R + N +F ++ +G++IGV A+I ++++ NG + + ++ + +
Sbjct: 5 ALLLALREIRRNLLRSF------LTVLGIVIGVGAVITMVTLGNGATKMVSDQIASLGSN 58
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+++ L + A F I+ + G LV G N +
Sbjct: 59 LLMVMPGQRLGPGRDSAGAPKFKIADIEAIQQQVNGLKAVAPVVGSPVTLVVGTQNWSST 118
Query: 128 YLQNSFSRFYGNVSND----FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ F GK + + +P G +
Sbjct: 119 VSGTTNDYFISGNWKIAAGRQFTDDEERAGKAVCVVGNTVKKELFGAGNPVGSSIRVKTF 178
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
++ + + V M L+ Q + + V +KD
Sbjct: 179 DCEVIGLLVAKGQGGMGQDQDDTVLMPLRTTQRRLTGSLDIGNVMVSLKDGTDATVAIAQ 238
Query: 244 IVRIL----------GNGVVVIDWQQRYQIF 264
+ +L + V+D +Q +
Sbjct: 239 LRSLLRERRKLAENADDNFNVMDTKQIAETL 269
>gi|95930993|ref|ZP_01313722.1| protein of unknown function DUF214 [Desulfuromonas acetoxidans DSM
684]
gi|95133002|gb|EAT14672.1| protein of unknown function DUF214 [Desulfuromonas acetoxidans DSM
684]
Length = 410
Score = 53.2 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 41/269 (15%), Positives = 94/269 (34%), Gaps = 18/269 (6%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++ AWR L+ NR+ I++A+ + + + L + +++ + V +GH
Sbjct: 3 ALLFAWRNLWHNRRRTLITLAAVSLTLMLTQAMHNLAI-----GSYQQMIYSGVRSGSGH 57
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGL------SSGGSGVLVRGI 121
+ + Y + ++ + ++ A L S V + GI
Sbjct: 58 LTVYHTQYRQDRSESLSFARQPVEQMVHDTIPALQSAPRIYLSALAQSSYDSRAVALTGI 117
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ S + + D + ++G+ L R L + G K+ + + +
Sbjct: 118 DMATESTFNPYLKKLPADEYLRTDERRDALVGEKLCRELKLRPGQKLVVTLQNAEGEMVS 177
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+R + + D+G++ ++L AQ + + + V+ D I T
Sbjct: 178 ELLRIRGV-----LHTGVNEVDSGLIMINLTMAQKLLGRPGHIHELALLVEQDDTINDTV 232
Query: 242 ENIVRILGN--GVVVIDWQQRYQIFFSCY 268
+ L + + V+ WQ
Sbjct: 233 ATLTEQLRDQPQLEVVPWQVAMPNLADAI 261
>gi|73668289|ref|YP_304304.1| putative ABC transporter permease [Methanosarcina barkeri str.
Fusaro]
gi|72395451|gb|AAZ69724.1| putative ABC transport system permease protein [Methanosarcina
barkeri str. Fusaro]
Length = 403
Score = 53.2 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 47/245 (19%), Positives = 87/245 (35%), Gaps = 7/245 (2%)
Query: 16 LFSNRKNAFISIASF-----ISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
LFS K AF SI S ++ +G++IGV A+I +S+ F + V I + +
Sbjct: 4 LFSAGKLAFGSIKSAKLRSTLTVLGIVIGVAAVIANVSLGASFNQHFTNEVTNIGSNFIY 63
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
Q P + Y ++ P ++ V P + Q S ++V G+ S
Sbjct: 64 IQGMQPKLFYDNELKIVENTPGILGVSP-LKSQTAEVTYMSETKNIMVSGVGKSYDEVAN 122
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
+ ND + + IS + INI G+ + + K+
Sbjct: 123 TKLQKGDFITDNDGYVAVIGYKVANEKFDRNISARNSINITFRVGEDEKVTKTFKVKAII 182
Query: 191 VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN 250
+ DN V + + ++ G+ DP +++T + + L
Sbjct: 183 QNPENTVIQAYNDNEAVLIPIDIMNEILGEKD-YGGVFAMANDPATVQETSDKVDERLAR 241
Query: 251 GVVVI 255
+
Sbjct: 242 NFGIS 246
>gi|291297270|ref|YP_003508668.1| hypothetical protein Mrub_2901 [Meiothermus ruber DSM 1279]
gi|290472229|gb|ADD29648.1| protein of unknown function DUF214 [Meiothermus ruber DSM 1279]
Length = 411
Score = 52.8 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/260 (12%), Positives = 81/260 (31%), Gaps = 9/260 (3%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+AWR L+ +R+ +++ + V + I+ V +GF + + +
Sbjct: 14 LAWRNLWRHRRR------TWLLVLVVAYATITTILFWGVQDGFTQSV-QVGNARFLSAPA 66
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
+ L + + +V +A L +
Sbjct: 67 LITTPQYFEDPDPEQGLPSLDFLPRVEAQPGVKAAAPRLEFPALIRSAYTADAVRARGVD 126
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
N+ +G+ + ++ ++ + T G ++
Sbjct: 127 PLLEARVSNLPGAIAQGRMLEQPGEVVLGQQLAERLDARLGERVVLDTSALAGPQALGLQ 186
Query: 191 VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN 250
V+G+ + D G V + +Q+A++ L+ +G+ + V + E + +L
Sbjct: 187 VVGLVKSGIAPVDRGTVLVHIQDARVLTGLQ-TATGVALDVTRGQEA-RIAEALQPVLPE 244
Query: 251 GVVVIDWQQRYQIFFSCYES 270
+ D Q S +
Sbjct: 245 NLRAYDLTQLLGGLSSAIGT 264
>gi|237654181|ref|YP_002890495.1| ABC transporter [Thauera sp. MZ1T]
gi|237625428|gb|ACR02118.1| ABC transporter related [Thauera sp. MZ1T]
Length = 671
Score = 52.8 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/255 (14%), Positives = 89/255 (34%), Gaps = 15/255 (5%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A R L +N + ++ +G++IGV ++I ++++ +G ++ +I +V + +++
Sbjct: 287 ALRALRAN------LFRTVLTLLGIVIGVASVIAMLAIGDGAKQKVIDQVSAMGTNLLTV 340
Query: 72 QKYYPLVDYQF-----IANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
+ P + + + I ++ VL V Q L +G S
Sbjct: 341 RPGAPNTRGRDAPATLVIEDVQAIAELPNVLASVPEQGATITLRAGNIDHRSSVNGTSAD 400
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ ++ G + D + + + G+ +
Sbjct: 401 YVVARNWLPASGTFFSAEDEARYATVAVLGQTVARALFPGR----DAVGEFILVNNIPFQ 456
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ + + +V+M A L + + + V V+D I+ T +
Sbjct: 457 VMGVMTPKGATPWGQDQDDIVFMPYTTASLRITGQRFLRNVTVAVEDVGQIDDTQAAVSA 516
Query: 247 ILGNGVVVIDWQQRY 261
+L V D+Q R
Sbjct: 517 LLLARHGVEDFQIRN 531
>gi|282850359|ref|ZP_06259738.1| efflux ABC transporter, permease protein [Veillonella parvula ATCC
17745]
gi|282579852|gb|EFB85256.1| efflux ABC transporter, permease protein [Veillonella parvula ATCC
17745]
Length = 403
Score = 52.8 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/259 (13%), Positives = 93/259 (35%), Gaps = 13/259 (5%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ ++AW L +N+ S ++ +G++IGV A+I ++S+ NG ++D+ +
Sbjct: 1 MYKESFLMAWASLIANKLR------SLLTMLGIIIGVAAVIALVSIGNGVKQDIEDSISS 54
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ ++++ P + + + + +V +
Sbjct: 55 LGSNLLVVLPGAPRTPGARSSQGSMKSLKISDYEAIAKLEGVKAASPMTNGSYVVIYQNK 114
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + + + +V+N K++ +++ + + + + D P+G
Sbjct: 115 NWTTSVAG-VNSNFQDVNNWTMTSGRFFSDKNVQNRERVAVVGQTVVKNLFTDEDPVGKE 173
Query: 184 IRSKSYTV------LGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
IR K+ + + V + + + + + V KD I
Sbjct: 174 IRVKNIPFRVIGVLKSKGNGTMGNDQDDTVLIPYTTSMERVEGIDYLRRVYVVAKDDGGI 233
Query: 238 EKTHENIVRILGNGVVVID 256
++ +I +L + D
Sbjct: 234 DRLQADIENLLRVRHNIKD 252
>gi|332042991|gb|EGI79189.1| protein of unknown function DUF214 [Lacinutrix algicola 5H-3-7-4]
Length = 412
Score = 52.8 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 48/273 (17%), Positives = 101/273 (36%), Gaps = 12/273 (4%)
Query: 5 SRFEVIVAWRYLFSNR-KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FE +A R + S K++ + I + IG++ +++ ++ G + + +V+
Sbjct: 1 MNFEYFIAKRIIDSKAYKSSISAPIIKIGIAAIAIGIIVMMIAIATGIGLQHKIRDKVVA 60
Query: 64 INGHVVIQQKYYPLVDY-------QFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
NGHV I ++ + V+ + V L +
Sbjct: 61 FNGHVTITNYDNNNSQESENPISTNQEFYPNFTNVSGVRHIQGVATKGTVIRLEDNVEYL 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
+++G+ + R + ++I K A L I +GDKI +
Sbjct: 121 VIKGVGADYDWQFFKEYLIEGRLPDFTKKRNEDLLISKYFANRLKIKVGDKIQANFIKEN 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLENAVSGIEVFVKDPD 235
+ R Y ++G++ F +YD ++ Q +N V EVF++D +
Sbjct: 181 LNQP---PRIMQYNIVGIYDSGFKEYDELYAIGDIKHIQRLNKWDDNQVGNFEVFIEDFN 237
Query: 236 AIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+++T + I + + + QR+ F
Sbjct: 238 TLDQTGQAIRHEIPSILDSKTITQRFPTIFEWI 270
>gi|291297272|ref|YP_003508670.1| hypothetical protein Mrub_2903 [Meiothermus ruber DSM 1279]
gi|290472231|gb|ADD29650.1| protein of unknown function DUF214 [Meiothermus ruber DSM 1279]
Length = 410
Score = 52.8 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 36/263 (13%), Positives = 85/263 (32%), Gaps = 15/263 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F+ + +WR L+ +R S ++ V + V +V +S + + +
Sbjct: 1 MFNLLSL--SWRNLWRHRSR------SLMTAGAVGLAVFFTLVYLSFLGAMENGIYNNLT 52
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI- 121
GH+ ++ + Y D ++ ++ R
Sbjct: 53 ASVGHLQVRVEGYRDKREFRDLLIPDAAGVEAQLAQKTQAARVIALEVPALIAGETRSRG 112
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ + + V + +A ++ K+ + P P
Sbjct: 113 ALLLGDQRPPELRQRFIQQHLVEGALPAVGDLEGIALGQALAKALKLRLGDPVYVYAPGT 172
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFV-----KDPDA 236
+G + +Y ++G+ R P + Y+SL AQ + + IE+
Sbjct: 173 LGRGAAAYRLVGLLRFPDPAVEARSAYLSLAAAQELA-APGSATRIELHFPFTRYAQDAQ 231
Query: 237 IEKTHENIVRILGNGVVVIDWQQ 259
+ + + LG G+ + W++
Sbjct: 232 LGPIQAQLAQQLGPGLRLESWKE 254
>gi|262374203|ref|ZP_06067479.1| peptide ABC transporter permease [Acinetobacter junii SH205]
gi|262310761|gb|EEY91849.1| peptide ABC transporter permease [Acinetobacter junii SH205]
Length = 663
Score = 52.8 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 35/266 (13%), Positives = 89/266 (33%), Gaps = 11/266 (4%)
Query: 2 SIFSRF--EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
S F R +A + ++R F ++ +G++IG+ +++ V+++ NG ++ +++
Sbjct: 262 SFFDRLGEAFRMALLAMNAHRMRTF------LTMLGIIIGIASVVSVVALGNGSQKQILE 315
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
+ + + + + D + +P L VS + + +
Sbjct: 316 NISSLGTNTITVYQGRGFGDNSRASQTKTLVPADADALSEQPYVDGVSPSVNTSVTLRFK 375
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
S +S + ++ + A+++ I + S +
Sbjct: 376 ETEASATVNGVSSDFFYVRGMTFKSGQPFDKGSVTQRAQDVVIDTNTEKTFFSDGTNPVG 435
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNG---MVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
+ + S V+G+ + + VY+ ++ V I V +KD
Sbjct: 436 QVILLGSVPSRVIGVIDAQQGFMGSSDSLNVYLPYSTVMSRMLGQSNVRSIIVRIKDEYP 495
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQ 262
I+ +L D +
Sbjct: 496 SSAAENAILTLLEQRHGAQDVFTQNS 521
>gi|284036753|ref|YP_003386683.1| hypothetical protein Slin_1839 [Spirosoma linguale DSM 74]
gi|283816046|gb|ADB37884.1| protein of unknown function DUF214 [Spirosoma linguale DSM 74]
Length = 416
Score = 52.8 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 50/288 (17%), Positives = 101/288 (35%), Gaps = 46/288 (15%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ R +A +L + ++ + ++ +GV G+ I ++S M G + + L
Sbjct: 1 MDIRIASQIAQTHLLAKKRQ------TLVAMLGVTFGIAMFITMISFMQGVNQFLEDSAL 54
Query: 63 GINGHVVIQQKYYPLVD----------------------------YQFIANRLDFIPDVI 94
+ H+ + + IA R++ V+
Sbjct: 55 DASPHIRMYNEVNTQRPGLIEQLNPGKFNVIYHQKPKDEQSRIKNGMTIAGRIERASGVL 114
Query: 95 KVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGK 154
V P V+ QAF + SG + + + + + G+++ G+I+G
Sbjct: 115 GVSPQVATQAFYNNGPIQISGTISGVDIDRENRLYKLTTRLKSGSLNALKTNPDGLIMGA 174
Query: 155 DLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEA 214
LA L + +GDK+ + +P G + ++ V+G F DN Y +L
Sbjct: 175 VLADKLNVRVGDKVTVTTPRGGI---------RTLRVVGTFGFGIGTIDNTKSYGNLSTV 225
Query: 215 QLYFNL-ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRY 261
Q + ++ I + + DP + + I DW
Sbjct: 226 QEMLQRDPSYITDIHIKMFDPLQAIPFGKQLRAI--YWYYTEDWATAN 271
>gi|261219265|ref|ZP_05933546.1| macrolide export ATP-binding/permease macB [Brucella ceti M13/05/1]
gi|261222801|ref|ZP_05937082.1| macrolide export ATP-binding/permease macB [Brucella ceti B1/94]
gi|261315957|ref|ZP_05955154.1| macrolide export ATP-binding/permease macB [Brucella pinnipedialis
M163/99/10]
gi|261316180|ref|ZP_05955377.1| macrolide export ATP-binding/permease macB [Brucella pinnipedialis
B2/94]
gi|261322326|ref|ZP_05961523.1| macrolide export ATP-binding/permease macB [Brucella ceti
M644/93/1]
gi|265987244|ref|ZP_06099801.1| macrolide export ATP-binding/permease macB [Brucella pinnipedialis
M292/94/1]
gi|265998759|ref|ZP_06111316.1| macrolide export ATP-binding/permease macB [Brucella ceti
M490/95/1]
gi|260921385|gb|EEX88038.1| macrolide export ATP-binding/permease macB [Brucella ceti B1/94]
gi|260924354|gb|EEX90922.1| macrolide export ATP-binding/permease macB [Brucella ceti M13/05/1]
gi|261295016|gb|EEX98512.1| macrolide export ATP-binding/permease macB [Brucella ceti
M644/93/1]
gi|261295403|gb|EEX98899.1| macrolide export ATP-binding/permease macB [Brucella pinnipedialis
B2/94]
gi|261304983|gb|EEY08480.1| macrolide export ATP-binding/permease macB [Brucella pinnipedialis
M163/99/10]
gi|262553448|gb|EEZ09217.1| macrolide export ATP-binding/permease macB [Brucella ceti
M490/95/1]
gi|264659441|gb|EEZ29702.1| macrolide export ATP-binding/permease macB [Brucella pinnipedialis
M292/94/1]
Length = 647
Score = 52.8 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/249 (13%), Positives = 78/249 (31%), Gaps = 8/249 (3%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A R L +N + ++ +G++IGV +++ ++++ G + ++ R+ + ++
Sbjct: 260 KMALRALRAN------IFRTVLTLLGIIIGVSSVVTMLAIGTGAQNTILDRINAMGTDLI 313
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ + L + A + + +
Sbjct: 314 LVRPAMAGFRGSGSIATLVPQDADAILELPNVKSAVPEVTGTVTLRRGNVDYQSQANGTV 373
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKI--NILSPYGDVTPMGMGIRSK 187
V++ + I LG ++ + + +P GD +
Sbjct: 374 PAFSEVKSWKVASGSFITQNDIDTYAPVAVLGTTVVKTLFPDGSNPVGDYILIQKIPFQI 433
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
T+ + +V + L L + V I V VKD I+ T I +
Sbjct: 434 IGTLEPKGAGFGGSDQDDVVVVPLSTGNLRLFGQKYVRSITVQVKDSSLIDTTQNQIQSL 493
Query: 248 LGNGVVVID 256
L D
Sbjct: 494 LDQRHKKRD 502
>gi|225628242|ref|ZP_03786276.1| Macrolide export ATP-binding/permease protein macB [Brucella ceti
str. Cudo]
gi|254708459|ref|ZP_05170287.1| hypothetical protein BpinM_16270 [Brucella pinnipedialis
M163/99/10]
gi|254708688|ref|ZP_05170499.1| hypothetical protein BpinB_00216 [Brucella pinnipedialis B2/94]
gi|254714535|ref|ZP_05176346.1| hypothetical protein BcetM6_14592 [Brucella ceti M644/93/1]
gi|254717433|ref|ZP_05179244.1| hypothetical protein BcetM_13721 [Brucella ceti M13/05/1]
gi|256030214|ref|ZP_05443828.1| hypothetical protein BpinM2_06136 [Brucella pinnipedialis
M292/94/1]
gi|256160388|ref|ZP_05458078.1| hypothetical protein BcetM4_15384 [Brucella ceti M490/95/1]
gi|256255596|ref|ZP_05461132.1| hypothetical protein BcetB_15208 [Brucella ceti B1/94]
gi|260167890|ref|ZP_05754701.1| Macrolide export ATP-binding/permease protein macB [Brucella sp.
F5/99]
gi|261757329|ref|ZP_06001038.1| macrolide export ATP-binding/permease macB [Brucella sp. F5/99]
gi|225616088|gb|EEH13136.1| Macrolide export ATP-binding/permease protein macB [Brucella ceti
str. Cudo]
gi|261737313|gb|EEY25309.1| macrolide export ATP-binding/permease macB [Brucella sp. F5/99]
Length = 651
Score = 52.8 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/249 (13%), Positives = 78/249 (31%), Gaps = 8/249 (3%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A R L +N + ++ +G++IGV +++ ++++ G + ++ R+ + ++
Sbjct: 264 KMALRALRAN------IFRTVLTLLGIIIGVSSVVTMLAIGTGAQNTILDRINAMGTDLI 317
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ + L + A + + +
Sbjct: 318 LVRPAMAGFRGSGSIATLVPQDADAILELPNVKSAVPEVTGTVTLRRGNVDYQSQANGTV 377
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKI--NILSPYGDVTPMGMGIRSK 187
V++ + I LG ++ + + +P GD +
Sbjct: 378 PAFSEVKSWKVASGSFITQNDIDTYAPVAVLGTTVVKTLFPDGSNPVGDYILIQKIPFQI 437
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
T+ + +V + L L + V I V VKD I+ T I +
Sbjct: 438 IGTLEPKGAGFGGSDQDDVVVVPLSTGNLRLFGQKYVRSITVQVKDSSLIDTTQNQIQSL 497
Query: 248 LGNGVVVID 256
L D
Sbjct: 498 LDQRHKKRD 506
>gi|226356280|ref|YP_002786020.1| ABC transporter permease [Deinococcus deserti VCD115]
gi|226318270|gb|ACO46266.1| putative ABC transporter, permease component; putative membrane
protein [Deinococcus deserti VCD115]
Length = 386
Score = 52.8 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/248 (11%), Positives = 65/248 (26%), Gaps = 12/248 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+AWR L + + ++ +G+ + V +++V +S+ G R+ + I +
Sbjct: 7 WRLAWRGLTRRKVR------TLLTALGITVAVASMVVFLSLGEGIRKVFSAELGSIGPDI 60
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + S + VRG + S
Sbjct: 61 QVSLNGLSQGFSPQ------PNLPQSVASDIQRLAPELGIASVTPVVMTVRGGFDPSRSA 114
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ G + + G + + +S
Sbjct: 115 VLYGLPAQPGIHAVFPKVSAAQGRLLSASDENSNVAVVGAKAAQNLGLKIGSQLNLNRRS 174
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ + +++ L Q +N VS + V ++DP + + L
Sbjct: 175 SVRVVGVLQPESGLVDSFLFLPLSTLQAAEGAQNRVSLVAVKLQDPARAREVAGALSSRL 234
Query: 249 GNGVVVID 256
Sbjct: 235 KLEAQTQS 242
>gi|289577650|ref|YP_003476277.1| hypothetical protein Thit_0408 [Thermoanaerobacter italicus Ab9]
gi|289527363|gb|ADD01715.1| protein of unknown function DUF214 [Thermoanaerobacter italicus
Ab9]
Length = 822
Score = 52.8 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 36/247 (14%), Positives = 76/247 (30%), Gaps = 20/247 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A R + + + FI +FI V + + A+ + + E + L +
Sbjct: 5 FKLALRNIIAKKVRFFILFLTFI-LSAVTL-MAAIFFRNAAIESREEQLRNNTLNSQIVI 62
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + + N++ I + + G A GV S
Sbjct: 63 LSSNDRDIYFKPEDVLNKIKNIEGIKYTVERCGGVAAYQDEKINVVGVDFNKQSQVYSFN 122
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
N + G ++ + +S + G G
Sbjct: 123 YINHIQLPASENQIVVSKVFSKKYGLNIGDVILLSTQNNEIKFKVSGIAEDKG------- 175
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ +V++++ AQ F E V I + +K+ D+I +I + +
Sbjct: 176 -----------IFQEGNIVFVNIDAAQRLFKKEGMVYSIGITLKNLDSISDVANDIKKAI 224
Query: 249 GNGVVVI 255
G+G +V
Sbjct: 225 GSGYIVE 231
>gi|89898288|ref|YP_515398.1| ABC transporter [Chlamydophila felis Fe/C-56]
gi|89331660|dbj|BAE81253.1| ABC transporter [Chlamydophila felis Fe/C-56]
Length = 503
Score = 52.8 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/229 (12%), Positives = 63/229 (27%), Gaps = 4/229 (1%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ E+++A++YL +K +I S S + + IV +SV+ G + I + +
Sbjct: 1 MKLELLIAFKYLIPRKKRLSSAIVSIFSIGIISLVTWLSIVFISVIYGLEQRWIHDLSQL 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ V I Y + +R + + + S +
Sbjct: 61 HSPVKILPSSIYYDSYYYQIDRHADLSQYTTKTIGEKLCSSCTNPYDPNSDYSLPDNFPM 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + L G+ I +P +
Sbjct: 121 PDNTSGGELRDPVKIAFEKLSPYLEQNQAQLLEFEEGVGYVQMDRIANPNTSESRTFSQF 180
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKD 233
+ + R+ + + + + E V +KD
Sbjct: 181 IAYPSDLAYKDRVLPYEQTDYSSEILNPFNRSPEGWEKDF----VRLKD 225
>gi|312130154|ref|YP_003997494.1| hypothetical protein Lbys_1427 [Leadbetterella byssophila DSM
17132]
gi|311906700|gb|ADQ17141.1| protein of unknown function DUF214 [Leadbetterella byssophila DSM
17132]
Length = 405
Score = 52.8 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 36/271 (13%), Positives = 84/271 (30%), Gaps = 23/271 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A Y+F+N++ + ++ +GV+IG+ I + + GF E V H+
Sbjct: 5 LQIARTYVFANKR------LTAVAVLGVLIGMSIYIFMNCLAVGFDEVSYSSVFKSTPHI 58
Query: 69 VIQQKYY--------------PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
+ Q L+ L ++SG
Sbjct: 59 RLYQDDQISKPLVEGEEFVIINPKIVPTNNRILNPNSVKELALAHPEVNIVTLQVTSGVF 118
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ + + + ++ + G + + L S + L
Sbjct: 119 FNSGKSQLSGTAIGIIPDEANQMFSLESMMVEGDWKGLQSNPNGILIGSGVAEKMSLKVG 178
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKD 233
++ +K+ V+G+F+ D Y++L AQ + V+ + + + D
Sbjct: 179 DNLNLTSSKSVNKNLQVMGIFKTSNSKIDKSTAYVNLSSAQQLLKENGDYVTDVNINLHD 238
Query: 234 PDAIEKTHENIVRILGNGVVVIDWQQRYQIF 264
+ + G ++Q +
Sbjct: 239 YNKAVPVANELSAT--TGYKAEGFEQSNETL 267
>gi|297568068|ref|YP_003689412.1| protein of unknown function DUF214 [Desulfurivibrio alkaliphilus
AHT2]
gi|296923983|gb|ADH84793.1| protein of unknown function DUF214 [Desulfurivibrio alkaliphilus
AHT2]
Length = 388
Score = 52.8 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/241 (12%), Positives = 68/241 (28%), Gaps = 12/241 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ ++ + L +R +F ++ +G+ V L V S GF + + + + H
Sbjct: 5 LKLSVQNLLRHRTRSF------LTMLGIAAAVGVLFSVFSFNRGFDQGLARELQATGLH- 57
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
++ A L + V + +LV + N D
Sbjct: 58 --FMVVPVGCAHEVAALVLHGAVVPKYLDAGVIDDVRKIDGVELATPILVAQLPNPDRHR 115
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ + + I ++ + +
Sbjct: 116 IDLIYGVEMEVLREIKPDW---RISGEIPTAPNELLLGYDVAEHAGLRLGDEFRYPAVDE 172
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
++ R D+ VY+ + AQ + + + I V V P+ + + +
Sbjct: 173 TFIVTGILERTNSQDDAFVYLDIGTAQRLMDNPDGATAIGVKVSAPERMGSIINQLEEEM 232
Query: 249 G 249
Sbjct: 233 P 233
>gi|238927946|ref|ZP_04659706.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Selenomonas flueggei ATCC 43531]
gi|238884181|gb|EEQ47819.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Selenomonas flueggei ATCC 43531]
Length = 404
Score = 52.8 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 35/246 (14%), Positives = 78/246 (31%), Gaps = 11/246 (4%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
L +N+ S ++ +G++IGV A+I ++S+ G R + + +++I
Sbjct: 14 LLANKLR------SLLTMLGIIIGVGAVIAMVSIGMGVRTSVSDSFASLGSNMLIVMPGS 67
Query: 76 PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSR 135
S + +S S N +++ +
Sbjct: 68 SNQGGVRGKAGTRKSLKYDDAKAIRSKIKGIDYVSPTVSSSYQVVNGNLNWNTQVEGVTP 127
Query: 136 FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMF 195
+ + I D+ + +++ + +G P+G IR + +
Sbjct: 128 ELMQIRSLKVENGTFITTSDMQKRSRVAVIGPTVASNLFGTENPVGKNIRINNQPFKVIG 187
Query: 196 RMRFPDYDNGM-----VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN 250
G +Y+ L AQ V I + V P+ +++ I +L
Sbjct: 188 ITASKGQSIGQDQDDVIYIPLTTAQERMLAITYVHSINIQVSSPEKMDEVQAEIETLLRQ 247
Query: 251 GVVVID 256
+
Sbjct: 248 RHHIRT 253
>gi|306844654|ref|ZP_07477239.1| Macrolide export ATP-binding/permease protein macB [Brucella sp.
BO1]
gi|306274826|gb|EFM56596.1| Macrolide export ATP-binding/permease protein macB [Brucella sp.
BO1]
Length = 647
Score = 52.8 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/249 (13%), Positives = 78/249 (31%), Gaps = 8/249 (3%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A R L +N + ++ +G++IGV +++ ++++ G + ++ R+ + ++
Sbjct: 260 KMALRALRAN------IFRTVLTLLGIIIGVSSVVTMLAIGTGAQNTILDRINAMGTDLI 313
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ + L + A + + +
Sbjct: 314 LVRPAMAGFRGSGSIATLVPQDADAILELPNVKSAVPEVTGTVTLRRGNVDYQSQANGTV 373
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKI--NILSPYGDVTPMGMGIRSK 187
V++ + I LG ++ + + +P GD +
Sbjct: 374 PAFSEAKSWKVASGSFITQNDIDTYAPVAVLGTTVVKTLFPDGSNPVGDYILIQKIPFQI 433
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
T+ + +V + L L + V I V VKD I+ T I +
Sbjct: 434 IGTLEPKGAGFGGSDQDDVVVVPLSTGNLRLFGQKYVRSITVQVKDSSLIDTTQNQIQSL 493
Query: 248 LGNGVVVID 256
L D
Sbjct: 494 LDQRHKKRD 502
>gi|260568762|ref|ZP_05839230.1| macrolide export ATP-binding/permease macB [Brucella suis bv. 4
str. 40]
gi|261754084|ref|ZP_05997793.1| macrolide export ATP-binding/permease macB [Brucella suis bv. 3
str. 686]
gi|260154146|gb|EEW89228.1| macrolide export ATP-binding/permease macB [Brucella suis bv. 4
str. 40]
gi|261743837|gb|EEY31763.1| macrolide export ATP-binding/permease macB [Brucella suis bv. 3
str. 686]
Length = 647
Score = 52.8 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/249 (13%), Positives = 78/249 (31%), Gaps = 8/249 (3%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A R L +N + ++ +G++IGV +++ ++++ G + ++ R+ + ++
Sbjct: 260 KMALRALRAN------IFRTVLTLLGIIIGVSSVVTMLAIGTGAQNTILDRINAMGTDLI 313
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ + L + A + + +
Sbjct: 314 LVRPAMAGFRGSGSIATLVPQDADAILELPNVKSAVPEVTGTVTLRRGNVDYQSQANGTV 373
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKI--NILSPYGDVTPMGMGIRSK 187
V++ + I LG ++ + + +P GD +
Sbjct: 374 PAFSEAKSWKVASGSFITQNDIDTYAPVAVLGTTVVKTLFPDGSNPVGDYILIQKIPFQI 433
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
T+ + +V + L L + V I V VKD I+ T I +
Sbjct: 434 IGTLEPKGAGFGGSDQDDVVVVPLSTGNLRLFGQKYVRSITVQVKDSSLIDTTQNQIQSL 493
Query: 248 LGNGVVVID 256
L D
Sbjct: 494 LDQRHKKRD 502
>gi|256370083|ref|YP_003107594.1| Macrolide export ATP-binding/permease protein macB [Brucella
microti CCM 4915]
gi|256000246|gb|ACU48645.1| Macrolide export ATP-binding/permease protein macB [Brucella
microti CCM 4915]
Length = 651
Score = 52.8 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/249 (13%), Positives = 78/249 (31%), Gaps = 8/249 (3%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A R L +N + ++ +G++IGV +++ ++++ G + ++ R+ + ++
Sbjct: 264 KMALRALRAN------IFRTVLTLLGIIIGVSSVVTMLAIGTGAQNTILDRINAMGTDLI 317
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ + L + A + + +
Sbjct: 318 LVRPAMAGFRGSGSIATLVPQDADAILELPNVKSAVPEVTGTVTLRRGNVDYQSQANGTV 377
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKI--NILSPYGDVTPMGMGIRSK 187
V++ + I LG ++ + + +P GD +
Sbjct: 378 PAFSEAKSWKVASGSFITQNDIDTYAPVAVLGTTVVKTLFPDGSNPVGDYILIQKIPFQI 437
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
T+ + +V + L L + V I V VKD I+ T I +
Sbjct: 438 IGTLEPKGAGFGGSDQDDVVVVPLSTGNLRLFGQKYVRSITVQVKDSSLIDTTQNQIQSL 497
Query: 248 LGNGVVVID 256
L D
Sbjct: 498 LDQRHKKRD 506
>gi|163845253|ref|YP_001622908.1| hypothetical protein BSUIS_B1148 [Brucella suis ATCC 23445]
gi|163675976|gb|ABY40086.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
Length = 651
Score = 52.8 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/249 (13%), Positives = 78/249 (31%), Gaps = 8/249 (3%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A R L +N + ++ +G++IGV +++ ++++ G + ++ R+ + ++
Sbjct: 264 KMALRALRAN------IFRTVLTLLGIIIGVSSVVTMLAIGTGAQNTILDRINAMGTDLI 317
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ + L + A + + +
Sbjct: 318 LVRPAMAGFRGSGSIATLVPQDADAILELPNVKSAVPEVTGTVTLRRGNVDYQSQANGTV 377
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKI--NILSPYGDVTPMGMGIRSK 187
V++ + I LG ++ + + +P GD +
Sbjct: 378 PAFSEAKSWKVASGSFITQNDIDTYAPVAVLGTTVVKTLFPDGSNPVGDYILIQKIPFQI 437
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
T+ + +V + L L + V I V VKD I+ T I +
Sbjct: 438 IGTLEPKGAGFGGSDQDDVVVVPLSTGNLRLFGQKYVRSITVQVKDSSLIDTTQNQIQSL 497
Query: 248 LGNGVVVID 256
L D
Sbjct: 498 LDQRHKKRD 506
>gi|161619604|ref|YP_001593491.1| macrolide export ATP-binding/permease protein macB [Brucella canis
ATCC 23365]
gi|254703454|ref|ZP_05165282.1| macrolide export ATP-binding/permease protein macB [Brucella suis
bv. 3 str. 686]
gi|161336415|gb|ABX62720.1| Macrolide export ATP-binding/permease protein macB [Brucella canis
ATCC 23365]
Length = 651
Score = 52.8 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/249 (13%), Positives = 78/249 (31%), Gaps = 8/249 (3%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A R L +N + ++ +G++IGV +++ ++++ G + ++ R+ + ++
Sbjct: 264 KMALRALRAN------IFRTVLTLLGIIIGVSSVVTMLAIGTGAQNTILDRINAMGTDLI 317
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ + L + A + + +
Sbjct: 318 LVRPAMAGFRGSGSIATLVPQDADAILELPNVKSAVPEVTGTVTLRRGNVDYQSQANGTV 377
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKI--NILSPYGDVTPMGMGIRSK 187
V++ + I LG ++ + + +P GD +
Sbjct: 378 PAFSEAKSWKVASGSFITQNDIDTYAPVAVLGTTVVKTLFPDGSNPVGDYILIQKIPFQI 437
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
T+ + +V + L L + V I V VKD I+ T I +
Sbjct: 438 IGTLEPKGAGFGGSDQDDVVVVPLSTGNLRLFGQKYVRSITVQVKDSSLIDTTQNQIQSL 497
Query: 248 LGNGVVVID 256
L D
Sbjct: 498 LDQRHKKRD 506
>gi|148560610|ref|YP_001259526.1| transmembrane ATP-binding ABC transporter protein [Brucella ovis
ATCC 25840]
gi|148371867|gb|ABQ61846.1| transmembrane ATP-binding ABC transporter protein [Brucella ovis
ATCC 25840]
Length = 651
Score = 52.8 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/249 (13%), Positives = 78/249 (31%), Gaps = 8/249 (3%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A R L +N + ++ +G++IGV +++ ++++ G + ++ R+ + ++
Sbjct: 264 KMALRALRAN------IFRTVLTLLGIIIGVSSVVTMLAIGTGAQNTILDRINAMGTDLI 317
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ + L + A + + +
Sbjct: 318 LVRPAMAGFRGSGSIATLVPQDADAILELPNVKSAVPEVTGTVTLRRGNVDYQSQANGTV 377
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKI--NILSPYGDVTPMGMGIRSK 187
V++ + I LG ++ + + +P GD +
Sbjct: 378 PAFSEAKSWKVASGSFITQNDIDTYAPVAVLGTTVVKTLFPDGSNPVGDYILIQKIPFQI 437
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
T+ + +V + L L + V I V VKD I+ T I +
Sbjct: 438 IGTLEPKGAGFGGSDQDDVVVVPLSTGNLRLFGQKYVRSITVQVKDSSLIDTTQNQIQSL 497
Query: 248 LGNGVVVID 256
L D
Sbjct: 498 LDQRHKKRD 506
>gi|304312568|ref|YP_003812166.1| Putative ABC transporter, ATP-binding protein [gamma
proteobacterium HdN1]
gi|301798301|emb|CBL46523.1| Putative ABC transporter, ATP-binding protein [gamma
proteobacterium HdN1]
Length = 643
Score = 52.8 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 38/257 (14%), Positives = 81/257 (31%), Gaps = 9/257 (3%)
Query: 3 IFSRF--EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+F F +AWR L +N + ++ +G++IGV A+I + +V G ++ ++ +
Sbjct: 248 MFPAFGESARMAWRSLRAN------WFRTVLTLLGIIIGVSAVITMSAVGAGGKQRVLTQ 301
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKV-LPFVSGQAFVSGLSSGGSGVLVR 119
+ + ++V + P + L L V V
Sbjct: 302 ISSMGTNLVSIRPGAPGMRGGGDIVTLIPGDAEAIAKLDNVDAVLPERNGRYTLRVGNVD 361
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
S + R + S F + + + + S
Sbjct: 362 YQSTVTGVNADLPWVRDWPLASGSFFDEADLKSYAPVIVLGKTVVDNLFPDGSDPIGRYI 421
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+ I + L + + ++ + + ++ ++ I V V D AI +
Sbjct: 422 LVKNIPFRVIGTLSAKGAGWMGDQDDASFVPITTGLIRLFGKSYLNAITVKVADLAAIGQ 481
Query: 240 THENIVRILGNGVVVID 256
T I +L D
Sbjct: 482 TTTEINDLLRQRHFSED 498
>gi|313200207|ref|YP_004038865.1| ABC transporter ATP-binding protein/permease [Methylovorus sp.
MP688]
gi|312439523|gb|ADQ83629.1| putative ATP-binding/permease fusion ABC transporter [Methylovorus
sp. MP688]
Length = 668
Score = 52.8 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/256 (12%), Positives = 87/256 (33%), Gaps = 11/256 (4%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AWR + NR + ++ +G++IGV A+IV+++V NG + +++ ++ +
Sbjct: 285 AWRVMTINR------FRTALTLLGIVIGVAAVIVMLAVGNGAKRNILSQISMFGSKNLYL 338
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
+ LD + V ++ ++ ++ G + +
Sbjct: 339 EPQGESALQNGGRISLDDVAAVREIPNVLAAMPYLEGFYTARYDNRDFRTEIGGVTVEFP 398
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTV 191
+ + F+ + K + + + + P G + +
Sbjct: 399 LTINWNVARGSFFNTTDENSMAKVVLLGTSVKKALFPDEVDPLGKYVLLNNIPFQVIGLL 458
Query: 192 LGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNG 251
R ++ V + A + + + + DP + +T + + +++
Sbjct: 459 AEKGAGRGQQDEDNRVVIPYSTASSQIFGSPYPNWVAITLDDPALMHETEQAVDQLMMAR 518
Query: 252 VVVIDWQQRYQIFFSC 267
+ D++ F+
Sbjct: 519 HHIKDYR-----LFNA 529
>gi|253998139|ref|YP_003050202.1| ABC transporter-like protein [Methylovorus sp. SIP3-4]
gi|253984818|gb|ACT49675.1| ABC transporter related [Methylovorus sp. SIP3-4]
Length = 668
Score = 52.8 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/256 (12%), Positives = 87/256 (33%), Gaps = 11/256 (4%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AWR + NR + ++ +G++IGV A+IV+++V NG + +++ ++ +
Sbjct: 285 AWRVMTINR------FRTALTLLGIVIGVAAVIVMLAVGNGAKRNILSQISMFGSKNLYL 338
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
+ LD + V ++ ++ ++ G + +
Sbjct: 339 EPQGESALQNGGRISLDDVAAVREIPNVLAAMPYLEGFYTARYDNRDFRTEIGGVTVEFP 398
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTV 191
+ + F+ + K + + + + P G + +
Sbjct: 399 LTINWNVARGSFFNTTDENSMAKVVLLGTSVKKALFPDEVDPLGKYVLLNNIPFQVIGLL 458
Query: 192 LGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNG 251
R ++ V + A + + + + DP + +T + + +++
Sbjct: 459 AEKGAGRGQQDEDNRVVIPYSTASSQIFGSPYPNWVAITLDDPALMHETEQAVDQLMMAR 518
Query: 252 VVVIDWQQRYQIFFSC 267
+ D++ F+
Sbjct: 519 HHIKDYR-----LFNA 529
>gi|294011586|ref|YP_003545046.1| ABC-type transport system permease component [Sphingobium japonicum
UT26S]
gi|292674916|dbj|BAI96434.1| ABC-type transport system permease component [Sphingobium japonicum
UT26S]
Length = 401
Score = 52.8 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 38/259 (14%), Positives = 88/259 (33%), Gaps = 9/259 (3%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A+R + ++ +F ++ +G++IGV A++ ++++ NG + +++ + +V+
Sbjct: 8 LAFRAINRHKLRSF------LTTLGIIIGVAAVVTMVTLGNGATAAVREQISSLGANVLQ 61
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
+ DF P + + SG + SN +
Sbjct: 62 LRPGQGFGRGGGGPRPPDFKPADLTAIENQLTGVRAVAPMVQSSGTAIYEGSNWSTTVYG 121
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
+ + F + ++ + + I L D + I+ S
Sbjct: 122 TTAAYFEVQSWKADTGRLFMPEEEEAGKPVCIIGNTVRTNLFQSNDPVGKRIRIKGVSCQ 181
Query: 191 VLGMFRMR---FPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
V+G R + +V M ++ Q F + +S I V V D ++ +
Sbjct: 182 VIGALATRGQGGFGDQDDVVVMPIKFVQRRFTGDRDISQIMVAVDDAYDTSTVQASLEEL 241
Query: 248 LGNGVVVIDWQQRYQIFFS 266
+ V + F
Sbjct: 242 MRERRKVKPGAEDNFNVFD 260
>gi|294850926|ref|ZP_06791602.1| hypothetical protein BAZG_03055 [Brucella sp. NVSL 07-0026]
gi|294821569|gb|EFG38565.1| hypothetical protein BAZG_03055 [Brucella sp. NVSL 07-0026]
Length = 651
Score = 52.8 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/249 (13%), Positives = 79/249 (31%), Gaps = 8/249 (3%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A R L +N + ++ +G++IGV +++ ++++ G + ++ R+ + ++
Sbjct: 264 KMALRALRAN------IFRTVLTLLGIIIGVSSVVTMLAIGTGAQNTILDRINAMGTDLI 317
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ + L + A + + +
Sbjct: 318 LVRPAMAGFRGSGSIATLVPQDADAILELPNVKSAVPEVTGTVTLRRGNVDYQSQANGTV 377
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKI--NILSPYGDVTPMGMGIRSK 187
V++ + I LG ++ + + +P GD +
Sbjct: 378 PAFSEAKSWKVASGSFITQNDIDTYASVAVLGTTVVKTLFPDGSNPVGDYILIQKIPFQI 437
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
T+ + +V + L L + V I V VKD I+ T + I +
Sbjct: 438 IGTLEPKGAGFGGSDQDDVVVVPLSTGNLRLFGQKYVRSITVQVKDSSLIDTTQKQIQSL 497
Query: 248 LGNGVVVID 256
L D
Sbjct: 498 LDQRHKKRD 506
>gi|260768316|ref|ZP_05877250.1| macrolide export ATP-binding/permease protein macB [Vibrio
furnissii CIP 102972]
gi|260616346|gb|EEX41531.1| macrolide export ATP-binding/permease protein macB [Vibrio
furnissii CIP 102972]
Length = 652
Score = 52.8 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/221 (12%), Positives = 73/221 (33%), Gaps = 1/221 (0%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
+F++ +G++IG+ +++ V+++ NG ++ ++ + + + + D + R
Sbjct: 277 TFLTMLGIIIGIASVVSVVALGNGSQKSILDSISSMGTNTIDIMPGTGFGDRRSGRVRTL 336
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
D + + LS+ + + + F R G +D
Sbjct: 337 TAADANALSNLSFVDSVTPTLSTSVTIKYGNQAVTATVQGVGPDFFRVRGYELSDGQYWD 396
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMF-RMRFPDYDNGMV 207
+ + + K + + G + F + D+ +
Sbjct: 397 QSSVQAMAQEAVIDNNTLKSLFPNQDPIGEVIFAGNLPVRIIGVTKAKESAFGNSDSLNI 456
Query: 208 YMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
++ +N + I V V D + + I+ +L
Sbjct: 457 WVPYTTVSARMMGQNYLDRISVRVNDHTPSDAAEQAIISLL 497
>gi|315180024|gb|ADT86938.1| ABC transporter related protein [Vibrio furnissii NCTC 11218]
Length = 652
Score = 52.5 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/221 (12%), Positives = 74/221 (33%), Gaps = 1/221 (0%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
+F++ +G++IG+ +++ V+++ NG ++ ++ + + + + D + R
Sbjct: 277 TFLTMLGIIIGIASVVSVVALGNGSQKSILDSISSMGTNTIDIMPGTGFGDRRSGRVRTL 336
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
D + + LS+ + + + F R G +D
Sbjct: 337 TAADANALSNLSFVDSVTPTLSTSVTIKYGNQAVTATVQGVGPDFFRVRGYELSDGQYWD 396
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMF-RMRFPDYDNGMV 207
+ + + K + + G + F + D+ +
Sbjct: 397 QSSVQAMAQEAVIDNNTLKSLFPNQDPIGEVIFAGNLPVRIIGVTKAKESAFGNSDSLNI 456
Query: 208 YMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
++ +N ++ I V V D + + I+ +L
Sbjct: 457 WVPYTTVSARMMGQNYLNRISVRVNDHTPSDAAEQAIISLL 497
>gi|224532183|ref|ZP_03672815.1| lipoprotein releasing factor [Borrelia valaisiana VS116]
gi|224511648|gb|EEF82054.1| lipoprotein releasing factor [Borrelia valaisiana VS116]
Length = 417
Score = 52.5 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 33/242 (13%), Positives = 86/242 (35%), Gaps = 5/242 (2%)
Query: 28 ASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRL 87
+ + + + +G + +I+ +S+MNGF+ D +V Q +
Sbjct: 21 LTIVIILSIALGEIIIILTISIMNGFQNDF----FLSITNVESGNLKIENELTQEEIKEI 76
Query: 88 DFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRG 147
I + + Q + + + + +D QN S + +
Sbjct: 77 KNIEGIKHINKIYETQGIGIQNYYYPTILNILAVDITDLKKDQNFISFTGLEKAELDLKN 136
Query: 148 KGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMV 207
+IIG L+ N + D + ++ + + K + + +F+ + + ++
Sbjct: 137 NEIIIGNILSYNFNLFENDTLELIITDEIKNIISLENDIKKFKIKSIFKSNYAKINETLI 196
Query: 208 YMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSC 267
+M++ L N+ ++ K + K + I + + + V W + + F+
Sbjct: 197 FMNIDYFIKNKLLHNSSINYQIKTKKLNPSNKLIKKI-KTINPKIKVKTWNEYNKEFYKA 255
Query: 268 YE 269
+
Sbjct: 256 LK 257
>gi|193213415|ref|YP_001999368.1| hypothetical protein Cpar_1776 [Chlorobaculum parvum NCIB 8327]
gi|193086892|gb|ACF12168.1| protein of unknown function DUF214 [Chlorobaculum parvum NCIB 8327]
Length = 422
Score = 52.5 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 41/291 (14%), Positives = 85/291 (29%), Gaps = 37/291 (12%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F +A R++ ++ + + + V + LI +S+ G + + ++
Sbjct: 1 MFRTL-FDIAIRHILGRKRQ------TLTTMLAVSVSTTVLITTISLTRGLLDSFTETII 53
Query: 63 GINGH-----------VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSS 111
+ H P F+ + + + S S
Sbjct: 54 DVAPHISLKGEKIDPIPTNLFDGDPSSKVAFVEDNIGRDEPEEVRNYGRILEIAASPAFS 113
Query: 112 GGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN-- 169
G + + + N N + IG+ L + +
Sbjct: 114 GKIVAASPFVESQIMAVKGNRNQPVLLKGVNIDREDRISRIGRSLTSGDLVQFKKTPDAL 173
Query: 170 ----------ILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFN 219
+ +T + S+ V G+F + + SL+ Q+
Sbjct: 174 LVGSTVANDLGVELDDQLTIISPDGTSRQCKVAGIFFTGVNA-ADNTILSSLKLGQIIEG 232
Query: 220 L-ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQI---FFS 266
L N V+GI V+DP A ++ R+ G + WQ+ F
Sbjct: 233 LPPNKVTGISFKVRDPFANAPVASDLERM--TGYRCLTWQEENASVLALFR 281
>gi|258514329|ref|YP_003190551.1| hypothetical protein Dtox_1042 [Desulfotomaculum acetoxidans DSM
771]
gi|257778034|gb|ACV61928.1| protein of unknown function DUF214 [Desulfotomaculum acetoxidans
DSM 771]
Length = 404
Score = 52.5 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 38/280 (13%), Positives = 93/280 (33%), Gaps = 21/280 (7%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++F+ E VA L +N+ S ++ +G++IGV A+I+++SV G + + +
Sbjct: 1 MNLFNNLE--VALNGLKANKLR------SALTMLGIIIGVSAVIIMVSVGQGASKKISAQ 52
Query: 61 VLGINGHVVIQQK--------YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSG 112
+ + ++++ + + I ++ V + + G
Sbjct: 53 ISSMGSNLLMVFPGAGSGPVRGSGGNVNTLTLDDANAIAELNLVSNTAPELSTGVTATYG 112
Query: 113 GSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILS 172
+ L S G+ D ++ + I
Sbjct: 113 SQTWTAEADGTTPEMQLIKDLSASSGSFFTADDVKSSSMVAVLGKTVVDNLYPVDI---D 169
Query: 173 PYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK 232
P G + + + + ++++ + AQ+ V I V +
Sbjct: 170 PVGTTIRINKLTFTVVGVLASKGASMGGQDQDNVIFIPITTAQIKLLGVKNVRLINVQTE 229
Query: 233 DPDAIEKTHENIVRILGNGVVVIDWQQRY--QIFFSCYES 270
P+++ ++ +L N + Q + + S E+
Sbjct: 230 TPESMSYVQASVEDLLRNRHRLNHQQDDFNVRNLTSVLET 269
>gi|261750831|ref|ZP_05994540.1| macrolide export ATP-binding/permease macB [Brucella suis bv. 5
str. 513]
gi|261740584|gb|EEY28510.1| macrolide export ATP-binding/permease macB [Brucella suis bv. 5
str. 513]
Length = 647
Score = 52.5 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 34/249 (13%), Positives = 77/249 (30%), Gaps = 8/249 (3%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A R L +N + ++ +G++IGV +++ ++++ G + ++ R+ + ++
Sbjct: 260 KMALRALRAN------IFRTVLTLLGIIIGVSSVVTMLAIGTGAQNTILDRINAMGTDLI 313
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ + L + A + + +
Sbjct: 314 LVRPAMAGFRGSGSIATLVPQDADAILELPNVKSAVPEVTGTVTLRRGNVDYQSQANGTV 373
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKI--NILSPYGDVTPMGMGIRSK 187
V++ + I LG ++ + +P GD +
Sbjct: 374 PAFSEAKSWKVASGSFITQNDIDTYAPVAVLGTTVVKTLFPEGSNPVGDYILIQKIPFQI 433
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
T+ + +V + L L + V I V VKD I+ T I +
Sbjct: 434 IGTLEPKGAGFGGSDQDDVVVVPLSTGNLRLFGQKYVRSITVQVKDSSLIDTTQNQIQSL 493
Query: 248 LGNGVVVID 256
L D
Sbjct: 494 LDQRHKKRD 502
>gi|254700335|ref|ZP_05162163.1| hypothetical protein Bsuib55_05694 [Brucella suis bv. 5 str. 513]
Length = 651
Score = 52.5 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 34/249 (13%), Positives = 77/249 (30%), Gaps = 8/249 (3%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A R L +N + ++ +G++IGV +++ ++++ G + ++ R+ + ++
Sbjct: 264 KMALRALRAN------IFRTVLTLLGIIIGVSSVVTMLAIGTGAQNTILDRINAMGTDLI 317
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ + L + A + + +
Sbjct: 318 LVRPAMAGFRGSGSIATLVPQDADAILELPNVKSAVPEVTGTVTLRRGNVDYQSQANGTV 377
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKI--NILSPYGDVTPMGMGIRSK 187
V++ + I LG ++ + +P GD +
Sbjct: 378 PAFSEAKSWKVASGSFITQNDIDTYAPVAVLGTTVVKTLFPEGSNPVGDYILIQKIPFQI 437
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
T+ + +V + L L + V I V VKD I+ T I +
Sbjct: 438 IGTLEPKGAGFGGSDQDDVVVVPLSTGNLRLFGQKYVRSITVQVKDSSLIDTTQNQIQSL 497
Query: 248 LGNGVVVID 256
L D
Sbjct: 498 LDQRHKKRD 506
>gi|329946101|ref|ZP_08293737.1| efflux ABC transporter, permease protein [Actinomyces sp. oral
taxon 170 str. F0386]
gi|328527883|gb|EGF54871.1| efflux ABC transporter, permease protein [Actinomyces sp. oral
taxon 170 str. F0386]
Length = 863
Score = 52.5 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 35/258 (13%), Positives = 75/258 (29%), Gaps = 6/258 (2%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
VAWR + ++ K F++ +F +GV L + S+ F + +
Sbjct: 4 VAWRSVRAHAKQFFLT--TFAVMLGVAFLSGTLALRASMSETFSKLTSSTITSDLYVQGP 61
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
+ A P + + V V +N
Sbjct: 62 KIASDNNSGGSNSAASTQTEPIDGSLADQIKQIDGVEAAKPDAQTTGVLVGANDTPVSSM 121
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
+ + F + R + + G N GD T + +
Sbjct: 122 GAPTLFLPLYDKEPGRTWAQGHMPQGGGEIALESGALKNSGLKVGDTTHIVIQGEPTEVK 181
Query: 191 VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN 250
V+G F +V M + + VS I + + D +++ + +++ +
Sbjct: 182 VVGEFHFGSSMASATVVGMDPEWFMPIAAPDGRVSNISIDLADGASVDTVKSEVTKVVPD 241
Query: 251 GVVVID----WQQRYQIF 264
G V +++ +
Sbjct: 242 GAQVKTRAELIKEQNKTI 259
>gi|296122765|ref|YP_003630543.1| hypothetical protein Plim_2518 [Planctomyces limnophilus DSM 3776]
gi|296015105|gb|ADG68344.1| protein of unknown function DUF214 [Planctomyces limnophilus DSM
3776]
Length = 516
Score = 52.5 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 40/94 (42%), Gaps = 7/94 (7%)
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL------ENAVSGIEVFVKDPD 235
+ TV+ F+ +YD+ +V+ +L+ Q + E A++ I++ +KD
Sbjct: 274 PQPVYFNATVVDTFKSGMSEYDSSLVFCNLEYLQQVRGMVHPTTGERAITSIQLKLKDFR 333
Query: 236 AIEKTHENIVRILGNGVV-VIDWQQRYQIFFSCY 268
+ + + + G+ + W+Q+ +
Sbjct: 334 SAGEVVDKLRAAFPPGLYTIRTWEQKQGPLLAAV 367
Score = 52.1 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 7/112 (6%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+++++ +YL + + S I VM+GV +IVV SVM GF +M R+ G+
Sbjct: 2 YKLLLCQKYLRTR-------YIALASIISVMLGVATMIVVNSVMAGFSSEMRDRIKGLLS 54
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
VVI+ Y L + + +S +G +
Sbjct: 55 DVVIETNGYDGEKNPDAHAALVKKVVGEHIAGMTTTVEIYGMISFEYAGQWI 106
>gi|260900177|ref|ZP_05908572.1| ABC transporter, ATP-binding/permease protein [Vibrio
parahaemolyticus AQ4037]
gi|308110017|gb|EFO47557.1| ABC transporter, ATP-binding/permease protein [Vibrio
parahaemolyticus AQ4037]
Length = 422
Score = 52.5 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 48/284 (16%), Positives = 86/284 (30%), Gaps = 28/284 (9%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M V +AW L NR+ S +S + + I V AL + + +
Sbjct: 1 MGKLIPVSVRLAWLNLQRNRRR------SLLSMLIIAIAVFALTSAGGFGLYTYDSLKES 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIA-----------NRLDFIPDVIKVLPFVSGQAFVSGL 109
GH+ + Y + + +L + +V V P V +S
Sbjct: 55 TARDTGHLTLTTPGYFAKEEEMPLSNGLSHADEITKQLIGLSEVRGVQPRVEFSGLISNG 114
Query: 110 SSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN 169
S + + R +SN + + +
Sbjct: 115 SKSSIFIGIGVNEREFDMKGPFLDVRDGQTLSNIHASRYDASEPEVMLGVGLANNLSVNV 174
Query: 170 ILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV 229
T + + + V G++ P+ D +Y+ + AQ + VS + V
Sbjct: 175 GDWITLLATTTDGALNAYDFKVRGIYSTGVPELDKRQLYVHINSAQSLLG-SDKVSALSV 233
Query: 230 FVKDPDAIEKTHENIVRILG--------NGVVVIDWQQRYQIFF 265
F+ D K + + IL V + WQ+R FF
Sbjct: 234 FLFDTCLTNKVEQQVATILNKQKPSFGDQEVEITPWQER--AFF 275
>gi|289803889|ref|ZP_06534518.1| outer membrane-specific lipoprotein transporter subunit LolC
[Salmonella enterica subsp. enterica serovar Typhi str.
AG3]
Length = 199
Score = 52.5 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 32/200 (16%), Positives = 71/200 (35%), Gaps = 5/200 (2%)
Query: 45 VVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQA 104
V+SVMNGF ++ +LG+ ++ ++ L Q ++
Sbjct: 1 TVLSVMNGFERELQNNILGLMPQAILSAEHGSLNPNQMPEKAVNLQGVNRIA----PLTT 56
Query: 105 FVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISI 164
L S S + + + S VI+G+ LA LG++
Sbjct: 57 GDVVLQSARSVAVGVMLGIDPAQKDPLTPYLVNVKQSELQPGKYNVILGEQLAGQLGVNR 116
Query: 165 GDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NA 223
GD+I ++ P + S+ + + D + +++Q+A
Sbjct: 117 GDQIRLMVPSASQFTPMGRLPSQRLFTVIGTFAANSEVDGYEMLVNIQDASRLMRYPAGN 176
Query: 224 VSGIEVFVKDPDAIEKTHEN 243
++G +++ +P ++ +
Sbjct: 177 ITGWRLWLDEPLQVDTLSQQ 196
>gi|160943120|ref|ZP_02090357.1| hypothetical protein FAEPRAM212_00600 [Faecalibacterium prausnitzii
M21/2]
gi|158445589|gb|EDP22592.1| hypothetical protein FAEPRAM212_00600 [Faecalibacterium prausnitzii
M21/2]
Length = 403
Score = 52.5 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 38/264 (14%), Positives = 87/264 (32%), Gaps = 20/264 (7%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A + ++SN+ F ++ +G++IGVMA+IV++ + NG + M + + +
Sbjct: 9 AIQNVWSNKLRTF------LTMLGIIIGVMAVIVIVGLGNGMTKSMRDSFSALGTNTLSI 62
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
Q + + D ++ VS Q SG +SG + S+ S +
Sbjct: 63 QVWGYGSRSVSVEEMYDICQRHSDLIKAVSPQVNFSGKASGTLKIGTTSYRWSNMSGVDE 122
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY-- 189
+F+ + + + + + +++ T + +
Sbjct: 123 NFTEMKNYQIVQGRGLQYMDMQDNKQVCVIGDYLNRVAFGGNGVGQTLKIGANKFRVVGV 182
Query: 190 -TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ D+ VY+ + ++ V + D + + L
Sbjct: 183 LSAKVSDPTMQQGSDDDCVYLPYTTVMRLSS-QSMVDCYTAMMADESLANEAKSTMEEEL 241
Query: 249 ------GNGVVVID---W-QQRYQ 262
NG V W ++ +
Sbjct: 242 MSILKTENGYYVYSASEWLEEMNK 265
>gi|166155247|ref|YP_001653502.1| lipoprotein releasing systen, inner membrane component [Chlamydia
trachomatis L2b/UCH-1/proctitis]
gi|165931235|emb|CAP06800.1| lipoprotein releasing systen, inner membrane component [Chlamydia
trachomatis L2b/UCH-1/proctitis]
Length = 503
Score = 52.5 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/235 (12%), Positives = 69/235 (29%), Gaps = 10/235 (4%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ E+++A++YL RK SI S S V + V +V MSV++G ++ +
Sbjct: 1 MKLELLLAFKYLIPKRKRLSSSIVSAFSIGIVALVVWLSVVFMSVIHGLQQ------RWV 54
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ ++ + I + ++ L +
Sbjct: 55 GDLASLHSSIRIEPSDKYYESYYYQIDSHAEASQYIYKTIGEKLLC--EQTDPYDPDVDF 112
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
D R + + G + + + + D G
Sbjct: 113 LLPEAFPDPEFSDNGEMIDPVRTANERMLSLFSSRKGSFVEFEEGMGHVHMDRAFRGHKG 172
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
++ + + + + + N NA S E ++ D +++
Sbjct: 173 EPRALSQYIAYSSDIFYQQRVLPFEETDYSTEVLNRFNASS--EGWLADFLVLQE 225
>gi|15604870|ref|NP_219654.1| hypothetical protein CT151 [Chlamydia trachomatis D/UW-3/CX]
gi|3328553|gb|AAC67742.1| hypothetical protein CT_151 [Chlamydia trachomatis D/UW-3/CX]
gi|289525192|emb|CBJ14667.1| lipoprotein releasing systen, inner membrane component [Chlamydia
trachomatis Sweden2]
gi|297748281|gb|ADI50827.1| lipoprotein release inner membrane protein [Chlamydia trachomatis
D-EC]
gi|297749161|gb|ADI51839.1| lipoprotein release inner membrane protein [Chlamydia trachomatis
D-LC]
Length = 503
Score = 52.5 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 32/249 (12%), Positives = 72/249 (28%), Gaps = 10/249 (4%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ E+++A++YL RK SI S S V + V +V MSV++G ++ +
Sbjct: 1 MKLELLLAFKYLIPKRKRLSSSIVSAFSMGIVALVVWLSVVFMSVIHGLQQ------RWV 54
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ ++ + I + ++ L +
Sbjct: 55 GDLASLHSSIRIEPSDKYYESYYYQIDSHAEASQYIYKTIGEKLLC--EQTDPYDPDVDF 112
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
D R + + G + + + + D G
Sbjct: 113 LLPEAFPDPEFSDNGEMIDPVRTANERMLSLFSSRKGSFVEFEEGMGHVHMDRAFRGHKG 172
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
++ + + + + + N NA S E ++ D +++ +
Sbjct: 173 EPRALSQYIAYSSDILYQQRMLPFEETDYSTEVLNRFNASS--EGWLADFLVLQEKFRGM 230
Query: 245 VRILGNGVV 253
IL
Sbjct: 231 SVILPVVYR 239
>gi|224418745|ref|ZP_03656751.1| ABC transporter [Helicobacter canadensis MIT 98-5491]
gi|253826728|ref|ZP_04869613.1| ABC-type transport system, permease component [Helicobacter
canadensis MIT 98-5491]
gi|313142261|ref|ZP_07804454.1| ABC transporter [Helicobacter canadensis MIT 98-5491]
gi|253510134|gb|EES88793.1| ABC-type transport system, permease component [Helicobacter
canadensis MIT 98-5491]
gi|313131292|gb|EFR48909.1| ABC transporter [Helicobacter canadensis MIT 98-5491]
Length = 406
Score = 52.5 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/271 (10%), Positives = 92/271 (33%), Gaps = 17/271 (6%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A+R + K F+ + ++ +GV+IGV A+I+++++ NG + + +R+ + +
Sbjct: 5 AFFLAFRQI----KRNFLR--AILTMLGVIIGVGAVIIMITLGNGTTQVITERMSSLGSN 58
Query: 68 VVIQQKYYPLV-----DYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+++ QF+ ++ + + L + + + + +
Sbjct: 59 ILLVFPARDQTPGKGGQKQFMLQDIEDLKLQVGYLTRAIAPLASASVLAQFRQSNTQTQA 118
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + + ++P G +G
Sbjct: 119 QGINAEYFIATDWGIAEGREFSKEEYRSGSNVCMIGESVRKNLFSASNINPLGARIRLGS 178
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN---AVSGIEVFVKDPDAIEK 239
+ + + + + ++ + L+ Q + + +S + + +KD +
Sbjct: 179 IVCDCIGILESKGQGAMGNDQDDVILLPLKTYQRSISKSDSLYNISRLMISLKDDVDSTE 238
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYES 270
I L + + ++ + F ++
Sbjct: 239 AVGAITEALRG---IRNIREGQKNDFEIMDT 266
>gi|296436590|gb|ADH18760.1| hypothetical protein G11222_00780 [Chlamydia trachomatis G/11222]
Length = 503
Score = 52.5 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/235 (12%), Positives = 69/235 (29%), Gaps = 10/235 (4%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ E+++A++YL RK SI S S V + V +V MSV++G ++ +
Sbjct: 1 MKLELLLAFKYLIPKRKRLSSSIVSAFSIGIVALVVWLSVVFMSVIHGLQQ------RWV 54
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ ++ + I + ++ L +
Sbjct: 55 GDLASLHSSIRIEPSDKYYESYYYQIDSHAEASQYIYKTIGEKLLC--EQTDPYDPDVDF 112
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
D R + + G + + + + D G
Sbjct: 113 LLPEAFPDPEFSDNGEMIDPVRTANERMLSLFSSRKGSFVEFEEGMGHVHMDRAFRGHKG 172
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
++ + + + + + N NA S E ++ D +++
Sbjct: 173 EPRALSQYIAYSSDILYQQRMLPFEETDYSTEVLNRFNASS--EGWLADFLVLQE 225
>gi|28899872|ref|NP_799527.1| hypothetical protein VPA0017 [Vibrio parahaemolyticus RIMD 2210633]
gi|260363172|ref|ZP_05776041.1| ABC transporter, ATP-binding/permease protein [Vibrio
parahaemolyticus K5030]
gi|260880458|ref|ZP_05892813.1| ABC transporter, ATP-binding/permease protein [Vibrio
parahaemolyticus AN-5034]
gi|260897851|ref|ZP_05906347.1| ABC transporter, ATP-binding/permease protein [Vibrio
parahaemolyticus Peru-466]
gi|28808155|dbj|BAC61360.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|308085895|gb|EFO35590.1| ABC transporter, ATP-binding/permease protein [Vibrio
parahaemolyticus Peru-466]
gi|308092395|gb|EFO42090.1| ABC transporter, ATP-binding/permease protein [Vibrio
parahaemolyticus AN-5034]
gi|308112053|gb|EFO49593.1| ABC transporter, ATP-binding/permease protein [Vibrio
parahaemolyticus K5030]
Length = 422
Score = 52.5 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 49/284 (17%), Positives = 86/284 (30%), Gaps = 28/284 (9%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M V +AW L NR+ S +S + + I V AL + + +
Sbjct: 1 MGKLIPVSVRLAWLNLQRNRRR------SLLSMLIIAIAVFALTSAGGFGLYTYDSLKES 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIA-----------NRLDFIPDVIKVLPFVSGQAFVSGL 109
GH+ + Y + + +L + +V V P V +S
Sbjct: 55 TARDTGHLTLTTPGYFAKEEEMPLSNGLSHADEITKQLIGLSEVRGVQPRVEFSGLISNG 114
Query: 110 SSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN 169
S + + R +SN + + S
Sbjct: 115 SKSSIFIGIGVNEREFDMKGPFLDVRDGQTLSNIHASRYDASEPEVMLGVDLASNLSVNV 174
Query: 170 ILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV 229
T + + + V G++ P+ D +Y+ + AQ + VS + V
Sbjct: 175 GDWITLLATTTDGALNAYDFKVRGIYSTGVPELDKRQLYVHINSAQSLLG-SDKVSALSV 233
Query: 230 FVKDPDAIEKTHENIVRILG--------NGVVVIDWQQRYQIFF 265
F+ D K + + IL V + WQ+R FF
Sbjct: 234 FLFDTCLTNKVEQQVATILNKQKPSFGDQEVEITPWQER--AFF 275
>gi|306841379|ref|ZP_07474082.1| Macrolide export ATP-binding/permease protein macB [Brucella sp.
BO2]
gi|306288564|gb|EFM59913.1| Macrolide export ATP-binding/permease protein macB [Brucella sp.
BO2]
Length = 595
Score = 52.5 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 34/249 (13%), Positives = 78/249 (31%), Gaps = 8/249 (3%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A R L +N + ++ +G++IGV +++ ++++ G + ++ R+ + ++
Sbjct: 208 KMALRALRAN------IFRTVLTLLGIIIGVSSVVTMLAIGTGAQNTILDRINAMGTDLI 261
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ + L + A + + +
Sbjct: 262 LVRPAMAGFRGSGSIATLVPRDADAILELPNVKSAVPEVTGTVTLRRGNVDYQSQANGTV 321
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKI--NILSPYGDVTPMGMGIRSK 187
V++ + I LG ++ + + +P GD +
Sbjct: 322 PAFSEAKSWKVASGSFITQNDIDTYAPVAVLGTTVVKTLFPDGSNPVGDYILIQKIPFQI 381
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
T+ + +V + L L + V I V VKD I+ T I +
Sbjct: 382 IGTLEPKGAGFGGSDQDDVVVVPLSTGNLRLFGQKYVRSITVQVKDSSLIDTTQNQIQSL 441
Query: 248 LGNGVVVID 256
L D
Sbjct: 442 LDQRHKKRD 450
>gi|295104672|emb|CBL02216.1| ABC-type antimicrobial peptide transport system, permease component
[Faecalibacterium prausnitzii SL3/3]
Length = 403
Score = 52.5 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 37/264 (14%), Positives = 86/264 (32%), Gaps = 20/264 (7%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A + ++SN+ F ++ +G++IGVMA+IV++ + NG + M + + +
Sbjct: 9 AIQNVWSNKLRTF------LTMLGIIIGVMAVIVIVGLGNGMTKSMRDSFSALGTNTLSI 62
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
Q + + D ++ VS Q SG + G + S+ S +
Sbjct: 63 QVWGYGSRTVPVEEMYDICQRHSDLIKAVSPQIEFSGNARGTLKIGTTSYRWSNMSGVDE 122
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY-- 189
+F+ + + + + + +++ T + +
Sbjct: 123 NFTEMKNYQIVQGRGLQYMDMQDNKQVCVIGDYLNRVAFGGNGVGQTLKIGANKFRVVGV 182
Query: 190 -TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ D+ VY+ + ++ V + D + + L
Sbjct: 183 LSAKVSDPTMQQGSDDDCVYLPYTTVMRLSS-QSMVDCYTAMMADESLANEAKSTMEEEL 241
Query: 249 ------GNGVVVID---W-QQRYQ 262
NG V W ++ +
Sbjct: 242 MSILKTENGYYVYSASEWLEEMNK 265
>gi|120554264|ref|YP_958615.1| ABC transporter related [Marinobacter aquaeolei VT8]
gi|134048481|sp|A1U0A9|MACB_MARAV RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|120324113|gb|ABM18428.1| ABC transporter related protein [Marinobacter aquaeolei VT8]
Length = 644
Score = 52.1 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 36/260 (13%), Positives = 82/260 (31%), Gaps = 16/260 (6%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ A R L SN + ++ +G++IGV ++I ++++ G R+D++ R+ +
Sbjct: 255 ALKSAVRSLHSN------LFRTALTLLGIVIGVASVITMLAIGEGARKDVVDRISTMGSD 308
Query: 68 VV------IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
++ Q+ + + I ++ VL + L
Sbjct: 309 LLLVRPGGPDQRGGRWSVTTLVPSDFKAINEIEGVLAAIPELTGGQTLRYSNRDHSAEIN 368
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ S + + G + D + D+ P G +
Sbjct: 369 ATSFRFPVARQWPVVEGTFFSAQDEASYAAVAVLGKTTANALFPDES----PLGKHLMVN 424
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ + + +V++ L + + I V V D D +++
Sbjct: 425 NVLFQVIGVMDEKGASPMGQDQDDVVFVPYTTGSLRIFGQTHLRNITVAVADIDRMDEIE 484
Query: 242 ENIVRILGNGVVVIDWQQRY 261
I L + D+ R
Sbjct: 485 ALIHDTLMARHGIEDFTIRN 504
>gi|282857040|ref|ZP_06266291.1| macrolide export ATP-binding/permease protein MacB [Pyramidobacter
piscolens W5455]
gi|282585201|gb|EFB90518.1| macrolide export ATP-binding/permease protein MacB [Pyramidobacter
piscolens W5455]
Length = 407
Score = 52.1 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 33/261 (12%), Positives = 75/261 (28%), Gaps = 14/261 (5%)
Query: 3 IFSRFEVI-VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+ S E+ A R L N+ +F ++ +G++IGV A+I +V G + + + +
Sbjct: 1 MISFVEIFRTALRALRRNKTRSF------LTTLGIIIGVGAVIAAFAVGAGANKVIDEEI 54
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ V + A L +A +++ +
Sbjct: 55 ASFGTNSVTVMRERNAQSTGDTAKYLTESDAEAIAANVSGVEAVAPTVNTSVQVIYGNTN 114
Query: 122 SNSDFSYLQNSFSRFYGNVS---NDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
++ S++ G + + K ++ + +
Sbjct: 115 WSTSVYGSTPSYADVNGYAIAKGRNLSESDQRMGNKVAVIGDTVAQKLFAHEDPLGKSIR 174
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF----NLENAVSGIEVFVKDP 234
+ + MV + L+ AQ N V I+V
Sbjct: 175 IAKVPFTIVGVFATKGQSTGGFMDQDDMVLVPLKTAQSRLVKWDNTPGRVGTIQVKGVSM 234
Query: 235 DAIEKTHENIVRILGNGVVVI 255
+++ I +L +
Sbjct: 235 ESLSYITSEITMLLRERHKIR 255
>gi|228478296|ref|ZP_04062904.1| macrolide export ATP-binding/permease protein MacB [Streptococcus
salivarius SK126]
gi|228249975|gb|EEK09245.1| macrolide export ATP-binding/permease protein MacB [Streptococcus
salivarius SK126]
Length = 402
Score = 52.1 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 31/250 (12%), Positives = 70/250 (28%), Gaps = 17/250 (6%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A + S++ +F ++ +G++IGV A++++M + NG R+ + V G V
Sbjct: 4 WKFALSSIRSHKMRSF------LTMLGIIIGVAAVVLIMGLGNGMRQSVTDSVTGDKDTV 57
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + A+ V +V + S + L IS +
Sbjct: 58 QVYYEAKGEELDPAYADLSQPTKPVKEVWLEQVAKQTPGIDSYFVTNSLTSSISLQKKTV 117
Query: 129 LQNSFSRFYGNVS----------NDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
+ + + + + ++ V
Sbjct: 118 KNVNITGASQGYFKAKKLEMLTGRSLQDNDYKNFSRVIVIDQMVAKKLFETNEDALNQVV 177
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+G + G ++ N +A+ I V D
Sbjct: 178 TIGNNDYRVIGVYKNKDTAIGAYGEIGTALVA-NTQLAAENNTDAIGQIFFHVTDVKNSS 236
Query: 239 KTHENIVRIL 248
++ + L
Sbjct: 237 SVAKDAAKRL 246
>gi|20806779|ref|NP_621950.1| ABC-type transport systems, involved in lipoprotein release,
permease components [Thermoanaerobacter tengcongensis
MB4]
gi|254478450|ref|ZP_05091827.1| efflux ABC transporter, permease protein [Carboxydibrachium
pacificum DSM 12653]
gi|20515240|gb|AAM23554.1| ABC-type transport systems, involved in lipoprotein release,
permease components [Thermoanaerobacter tengcongensis
MB4]
gi|214035621|gb|EEB76318.1| efflux ABC transporter, permease protein [Carboxydibrachium
pacificum DSM 12653]
Length = 391
Score = 52.1 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 35/244 (14%), Positives = 87/244 (35%), Gaps = 17/244 (6%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A R + SN+ +F ++ +G++IGV A+I ++S+ G + + ++ + +
Sbjct: 6 ALKIAIRSILSNKLRSF------LTMLGIIIGVTAVIALVSIGQGSTKSVTSQIQSMGSN 59
Query: 68 VVI---QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+++ + A L + V P +S ++ +V G+++
Sbjct: 60 LIMVSVMGRGSQASLTYEQAMTLKDGNYIKAVSPVISSNVTAKYGNNSVDSAMVNGVNSD 119
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + D + V + ++ ++ + T G
Sbjct: 120 YQAIRSIQVAEGRFISPMDDEGRNKVAVLGH-------NVATELFGFTDPVGKTIKLNGQ 172
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
VL + D+ +++ ++ YF + I + +PD +E I
Sbjct: 173 AFTVVGVLALKGSSIAGSDDDAIFIPIKTM-FYFAKNKNIRQIYIGASNPDTVEIAKNMI 231
Query: 245 VRIL 248
L
Sbjct: 232 NNHL 235
>gi|323144702|ref|ZP_08079284.1| macrolide export ATP-binding/permease protein MacB [Succinatimonas
hippei YIT 12066]
gi|322415519|gb|EFY06271.1| macrolide export ATP-binding/permease protein MacB [Succinatimonas
hippei YIT 12066]
Length = 653
Score = 52.1 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 35/242 (14%), Positives = 80/242 (33%), Gaps = 7/242 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
I+A R + +NR + ++ +G++IG+MA++ V+++ G E +I+ + + +
Sbjct: 263 AFIMAVRAMIANRMR------TLLTMLGIIIGIMAVVSVVALARGASEKVIENISSLGTN 316
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + D + R D+ + + + + S N
Sbjct: 317 TITVYPGERMGDVRSARVRTLTPRDLNALDGQPFVDSVSASIQSSVLIRHSNLEFNGTVY 376
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ R YG + + + S + +
Sbjct: 377 GVSPDLFRVYGYTTAQGRLFTEAETKNYSQVCVVDHNTAENFFGSSDPIGQTILVNSMPV 436
Query: 188 SYTVL-GMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ + F +N VYM +N +S I V ++D + +I+
Sbjct: 437 MIVGVLDIIDSPFMRSENLYVYMPYTSVMSRLYKQNYLSSIVVRIQDGFSTAVAERSIIN 496
Query: 247 IL 248
+L
Sbjct: 497 LL 498
>gi|302391167|ref|YP_003826987.1| hypothetical protein Acear_0375 [Acetohalobium arabaticum DSM 5501]
gi|302203244|gb|ADL11922.1| protein of unknown function DUF214 [Acetohalobium arabaticum DSM
5501]
Length = 418
Score = 52.1 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 39/268 (14%), Positives = 84/268 (31%), Gaps = 28/268 (10%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
F + +A + L +++ ++ + + +G+ ++ S+ G E + +
Sbjct: 8 FFIRLALKNLTRHKRRVLVTASI------IALGIAIFLIYDSIQIGINELSFNNIKNLET 61
Query: 67 HVVIQQKYYPL------------VDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
+ Q + + P + + A ++ +
Sbjct: 62 GDLQVVNKDYWTKREELSLRNLIHQEQDLLQIIRKTPYFEALSSQLKFSANLNNGTDELP 121
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
V G + ++GK LA + + IGD + +L
Sbjct: 122 VVACGIDPYQHKKVFTTEDYLVEG--RMLENGRYEAVLGKKLADLMELKIGDYLTLLFRT 179
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
+ ++G+ PD +N +VY+ L+ AQ NL N VS I V +
Sbjct: 180 PQ-----DTFNTIDVEIVGLVHTNNPDVNNNLVYLPLETAQQALNLNNRVSQIVVKLNYD 234
Query: 235 DAIEKTHENIVRIL---GNGVVVIDWQQ 259
+ E + L + W+
Sbjct: 235 GKAVEAAEELSTELTNYNQKLTAHSWRD 262
>gi|166154372|ref|YP_001654490.1| lipoprotein releasing systen, inner membrane component [Chlamydia
trachomatis 434/Bu]
gi|301335625|ref|ZP_07223869.1| lipoprotein releasing systen, inner membrane component [Chlamydia
trachomatis L2tet1]
gi|165930360|emb|CAP03846.1| lipoprotein releasing systen, inner membrane component [Chlamydia
trachomatis 434/Bu]
Length = 503
Score = 52.1 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 35/257 (13%), Positives = 75/257 (29%), Gaps = 15/257 (5%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ E+++A++YL RK SI S S V + V +V MSV++G ++ +
Sbjct: 1 MKLELLLAFKYLIPKRKRLSSSIVSAFSIGIVALVVWLSVVFMSVIHGLQQ------RWV 54
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ ++ + I + ++ L +
Sbjct: 55 GDLASLHSSIRIEPSDKYYESYYYQIDSHAEASQYIYKTIGEKLLC--EQTDPYDPDVDF 112
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
D R + + G + + + + D G
Sbjct: 113 LLPEAFPDPEFSDNGEMIDPVRTANERMLSLFSSRKGSFVEFEEGMGHVHMDRAFRGHKG 172
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
++ + + + + + N NA S E ++ D +++ +
Sbjct: 173 EPRALSQYIAYSSDILYQQRVLPFEETDYSTEVLNRFNASS--EGWLADFLVLQEKFRGM 230
Query: 245 VRILG-----NGVVVID 256
IL G V D
Sbjct: 231 SVILPVVYRDQGYRVGD 247
>gi|237802580|ref|YP_002887774.1| lipoprotein releasing systen, inner membrane component [Chlamydia
trachomatis B/Jali20/OT]
gi|231273814|emb|CAX10598.1| lipoprotein releasing systen, inner membrane component [Chlamydia
trachomatis B/Jali20/OT]
Length = 503
Score = 52.1 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 31/235 (13%), Positives = 71/235 (30%), Gaps = 10/235 (4%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ E+++A++YL RK SI S S V + V +V MSV++G ++ ++ + +
Sbjct: 1 MKLELLLAFKYLIPKRKRLSSSIVSAFSMGIVALVVWLSVVFMSVIHGLQQRWVEDLASL 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
++ + I + ++ L +
Sbjct: 61 ------HSSIRIEPSDKYYESYYYQIDSHAEASQYIYKTIGEKLLC--EQTDPYDPDVDF 112
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
D R + + G + + I + D G
Sbjct: 113 LLPEAFPDPEFSDNGEMIDPVRTANERMLSLFSSRKGSFVEFEEGIGHVHMDRAFRGHKG 172
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
++ + + + + + N NA S E ++ D +++
Sbjct: 173 EPRALSQYIAYSSDILYQQRVLPFEETDYSTEVLNRFNASS--EGWLADFLVLQE 225
>gi|302386533|ref|YP_003822355.1| protein of unknown function DUF214 [Clostridium saccharolyticum
WM1]
gi|302197161|gb|ADL04732.1| protein of unknown function DUF214 [Clostridium saccharolyticum
WM1]
Length = 394
Score = 52.1 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/248 (12%), Positives = 74/248 (29%), Gaps = 9/248 (3%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M+I +A + ++SN+ +F ++ +G++IGV ++I+++S++NG M +
Sbjct: 1 MNILQ--SFKMALKSIWSNKMRSF------LTMLGIIIGVASVIILVSLVNGQMSYMTES 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + + + F ++ ++ + ++ G+ L
Sbjct: 53 FASMGTNQINVNVSNLSSRSLSVDEMYQFYDKHKELFAQMTPKVTLTSTIKNGTESLTGT 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + + + + +
Sbjct: 113 TVTGVSEDYLDMKDQTLDSGRFLQYSDIVSRQKVCVVGYYVAWDLYGGVEKAIDQTIKIN 172
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G R + ++Y+ A N N +S D D +
Sbjct: 173 GYPFRIVGVISRQDEEELEDGGTDDVLYLPYSCAAKMSNNAN-ISSYVFATADMDHTTEA 231
Query: 241 HENIVRIL 248
E I L
Sbjct: 232 KEVINTFL 239
>gi|306840057|ref|ZP_07472844.1| Macrolide export ATP-binding/permease protein macB [Brucella sp. NF
2653]
gi|306404871|gb|EFM61163.1| Macrolide export ATP-binding/permease protein macB [Brucella sp. NF
2653]
Length = 647
Score = 52.1 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 34/249 (13%), Positives = 77/249 (30%), Gaps = 8/249 (3%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A R L +N + ++ G++IGV +++ ++++ G + ++ R+ + ++
Sbjct: 260 KMALRALRAN------IFRTVLTLFGIIIGVSSVVTMLAIGTGAQNTILDRINAMGTDLI 313
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ + L + A + + +
Sbjct: 314 LVRPAMAGFRGSGSIATLVPQDADAILELPNVKSAVPEVTGTVTLRRGNVDYQSQANGTV 373
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKI--NILSPYGDVTPMGMGIRSK 187
V++ + I LG ++ + + +P GD +
Sbjct: 374 PAFSEAKSWKVASGSFITQNDIDTYAPVAVLGTTVVKTLFPDGSNPVGDYILIQKIPFQI 433
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
T+ + +V + L L + V I V VKD I+ T I +
Sbjct: 434 IGTLEPKGAGFGGSDQDDVVVVPLSTGNLRLFGQKYVRSITVQVKDSSLIDTTQNQIQSL 493
Query: 248 LGNGVVVID 256
L D
Sbjct: 494 LDQRHKKRD 502
>gi|254719667|ref|ZP_05181478.1| hypothetical protein Bru83_09016 [Brucella sp. 83/13]
gi|265984681|ref|ZP_06097416.1| macrolide export ATP-binding/permease macB [Brucella sp. 83/13]
gi|264663273|gb|EEZ33534.1| macrolide export ATP-binding/permease macB [Brucella sp. 83/13]
Length = 651
Score = 52.1 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 34/249 (13%), Positives = 77/249 (30%), Gaps = 8/249 (3%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A R L +N + ++ G++IGV +++ ++++ G + ++ R+ + ++
Sbjct: 264 KMALRALRAN------IFRTVLTLFGIIIGVSSVVTMLAIGTGAQNTILDRINAMGTDLI 317
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ + L + A + + +
Sbjct: 318 LVRPAMAGFRGSGSIATLVPQDADAILELPNVKSAVPEVTGTVTLRRGNVDYQSQANGTV 377
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKI--NILSPYGDVTPMGMGIRSK 187
V++ + I LG ++ + + +P GD +
Sbjct: 378 PAFSEAKSWKVASGSFITQNDIDTYAPVAVLGTTVVKTLFPDGSNPVGDYILIQKIPFQI 437
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
T+ + +V + L L + V I V VKD I+ T I +
Sbjct: 438 IGTLEPKGAGFGGSDQDDVVVVPLSTGNLRLFGQKYVRSITVQVKDSSLIDTTQNQIQSL 497
Query: 248 LGNGVVVID 256
L D
Sbjct: 498 LDQRHKKRD 506
>gi|16799496|ref|NP_469764.1| hypothetical protein lin0419 [Listeria innocua Clip11262]
gi|16412848|emb|CAC95652.1| lin0419 [Listeria innocua Clip11262]
Length = 392
Score = 52.1 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/268 (11%), Positives = 95/268 (35%), Gaps = 20/268 (7%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M+IF + +A + L S + F ++ +G++IGV ++I+++S+ +++ +
Sbjct: 5 MNIFQ--SIKLALKQLLSAKFRTF------LTMLGIIIGVFSVILLVSIGEAISKNVSSQ 56
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + ++V Y + +F + + + ++ + + + V G
Sbjct: 57 LGDMGSNLVSVSFYSDNPNEKFTYKEANGLLNEDEIGSPEVMKTKEVRTNVKTASSQVTG 116
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
++ + + + D + V + + + +
Sbjct: 117 VNEDYATIKNLELTSGRFCSNVDVRFAQKVTVIGSEIAKKYFKNQNPVGKHIQIAGARYL 176
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKD----PDA 236
+G+ + + +++ + A+ F ++V + K+ PD
Sbjct: 177 VIGVLKEKGES-------LFGSADKKLFIPVTSAERLF-KTDSVDLYYIQTKNTEQVPDV 228
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIF 264
+++T + + ++ N + Q
Sbjct: 229 VKRTKQRLSQLFPNNKEAYTVVNQQQAL 256
>gi|241114298|ref|YP_002973773.1| protein of unknown function DUF214 [Ralstonia pickettii 12D]
gi|240868871|gb|ACS66529.1| protein of unknown function DUF214 [Ralstonia pickettii 12D]
Length = 830
Score = 52.1 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 29/233 (12%), Positives = 65/233 (27%), Gaps = 6/233 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S I+ + IG+ A+I G +M++ I +
Sbjct: 18 SAITISSIAIGLAAMIFNWGFTAGMNREMVENTTRYFAGDAQVHLKGYH--DDPILDLAM 75
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I + + + RG + + +
Sbjct: 76 PDSAPILHAVRNEAGVAAASIRLETKALASRGDKSRGLMLVGVEPADEAQVTMLSDAIVA 135
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGM----FRMRFPDYDN 204
G + L + + + P ++ +G G + FR + D D
Sbjct: 136 GQPLTTGAPGVLIGEMLAEALAVRPGQNIVFVGQGYDGSISSGKYPVRGIFRSKIDDLDG 195
Query: 205 GMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDW 257
+ M L + + + + I + +++ +E + LG+ V+ W
Sbjct: 196 YVAVMPLPVVREFLSAPGGATAIALRLRERSRLEPVSAGLAERLGDRYEVVGW 248
Score = 44.4 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 41/245 (16%), Positives = 89/245 (36%), Gaps = 14/245 (5%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
+ + G G++ + ++ +GF + I+ + ++ DY D
Sbjct: 440 TALMAAGAAFGIVGFVFILGFFDGFFDQTIENSTRYLTGHIQVERKGFRKDYAPELAIDD 499
Query: 89 FIP--------DVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNV 140
+ + + ++ +S G+++ GI + +
Sbjct: 500 AVSLLQAVRGTPGVIAAAPRTQVQALASTASKSEGIMLIGIDPVAEAKVTFISRTVVQGR 559
Query: 141 SNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFP 200
+ + V+IG+ LA LG+ +G+KI +++ + Y V G+F
Sbjct: 560 ALIPGADREVMIGRRLADKLGVRLGEKIVVMAQAANGELGTAA-----YGVGGIFSTESA 614
Query: 201 DYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL-GNGVVVIDWQQ 259
+D +++L AQ L + VS I V ++D + + + G V +I WQ+
Sbjct: 615 SFDGAFAFVTLPAAQSLLALGSRVSTINVRLEDRAHVSAAVALLRARIGGTDVTLIPWQE 674
Query: 260 RYQIF 264
Sbjct: 675 LLPQL 679
>gi|153832860|ref|ZP_01985527.1| efflux ABC transporter, permease protein [Vibrio harveyi HY01]
gi|148870783|gb|EDL69682.1| efflux ABC transporter, permease protein [Vibrio harveyi HY01]
Length = 413
Score = 52.1 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 41/285 (14%), Positives = 89/285 (31%), Gaps = 32/285 (11%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + + AWR L+ N+ + I ++ G+M ++ +M MNG + MIK
Sbjct: 1 MLMLVKL----AWRNLWRNKLR------TSIMLGAMVFGLMGVVAMMGFMNGLVDSMIKN 50
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ Q+ LV+ + D + ++ + G R
Sbjct: 51 AISWQTSHFQIQQKSYLVNPELKDVIPDANKISKVLSANREVKSISERFLADGMIASARS 110
Query: 121 I--------SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILS 172
+ + + +++ +A L + +G K+ +
Sbjct: 111 TRGIRINGVNIDQEQNITPLSQHIVDGEWLSEEGRNPILVSSKIAERLKLRVGSKVVLTL 170
Query: 173 PYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK 232
+ G R + F+ +D+G VY + + L I + +
Sbjct: 171 SDVNGEVAGAAFRVRGI-----FKTPSTGFDDGNVYARKADLEKVAGLSGT-HEIAILLT 224
Query: 233 DPDAIEKTHENIV---RILGNG----VVVIDWQQRYQIFFSCYES 270
+ E + + IL + V WQ+ + + +
Sbjct: 225 SNNDTE-LKQLLAFTHSILPPETKDLLSVRPWQEIQPLLSTMMST 268
>gi|187928746|ref|YP_001899233.1| hypothetical protein Rpic_1663 [Ralstonia pickettii 12J]
gi|187725636|gb|ACD26801.1| protein of unknown function DUF214 [Ralstonia pickettii 12J]
Length = 535
Score = 52.1 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 29/233 (12%), Positives = 65/233 (27%), Gaps = 6/233 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S I+ + IG+ A+I G +M++ I +
Sbjct: 18 SAITISSIAIGLAAMIFNWGFTAGMNREMVENTTRYFAGDAQVHLKGYH--DDPILDLAM 75
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I + + + RG + + +
Sbjct: 76 PDSAPILHAVRNEAGVAAASIRLETKALASRGDKSRGLMLVGVEPADEAQVTMLSDAIVA 135
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGM----FRMRFPDYDN 204
G + L + + + P ++ +G G + FR + D D
Sbjct: 136 GQPLTTGAPGVLIGEMLAEALAVRPGQNIVFVGQGYDGSISSGKYPVRGIFRSKIDDLDG 195
Query: 205 GMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDW 257
+ M L + + + + I + +++ +E + LG+ V+ W
Sbjct: 196 YVAVMPLPVVREFLSAPGGATAIALRLRERSRLEPVSAGLAERLGDRYEVVGW 248
>gi|323491224|ref|ZP_08096409.1| hypothetical protein VIBR0546_12362 [Vibrio brasiliensis LMG 20546]
gi|323314350|gb|EGA67429.1| hypothetical protein VIBR0546_12362 [Vibrio brasiliensis LMG 20546]
Length = 409
Score = 52.1 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/254 (11%), Positives = 73/254 (28%), Gaps = 8/254 (3%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +AWR L+ ++ ++ ++ + + + + S+ G I +
Sbjct: 3 LKLAWRNLWRQKRRTLLTASALALAL------ILSLAMRSLQEGTYASNIDNSARFYTGL 56
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ Q + + + + L S
Sbjct: 57 IQLQHVDFADSHSIDDLLPASDEFIQPLKTMPEITEMIPRLESFALAAAGETSKGVMVLG 116
Query: 129 LQNSFSRFYGNVSNDFDRGKGVII--GKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ + Y + + G+ + + + L +
Sbjct: 117 IDPNGEDAYSGLGDKVIEGQYLTLGDSQVLVGESLARSMKVKVGDELILYGQGYRGQTAA 176
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ V G+ P ++ +VY+ L AQ F+ + V+ + I + + +
Sbjct: 177 GLFIVKGIVSFPMPQLESQLVYLPLDTAQQLFSTQEQVTNWVLHTDKLSDIPRIVAQLKQ 236
Query: 247 ILGNGVVVIDWQQR 260
+ V V DWQQ
Sbjct: 237 AYPDDVSVQDWQQL 250
>gi|322372457|ref|ZP_08046993.1| ABC transporter, permease protein [Streptococcus sp. C150]
gi|321277499|gb|EFX54568.1| ABC transporter, permease protein [Streptococcus sp. C150]
Length = 402
Score = 52.1 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 31/250 (12%), Positives = 70/250 (28%), Gaps = 17/250 (6%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A + S++ +F ++ +G++IGV A++++M + NG R+ + V G V
Sbjct: 4 WKFALSSIRSHKMRSF------LTMLGIIIGVAAVVLIMGLGNGMRQSVTDSVTGDKDTV 57
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + A+ V +V + S + L IS +
Sbjct: 58 QVYYEAKGEELDPAYADLAKPTKPVKEVWLEQVARQTPGIDSYFVTNSLTSSISLQKKTV 117
Query: 129 LQNSFSRFYGNVS----------NDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
+ + + + + ++ V
Sbjct: 118 KNVNITGASQGYFKAKKLEMLTGRSLQDNDYKNFSRVIVIDQMVAKKLFETNGDALNQVV 177
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+G + G ++ N +A+ I V D
Sbjct: 178 TIGNNDYRVIGVYKNKDTAIGAYGEIGTALVA-NTQLAAENNTDAIGQIFFHVTDVKNSS 236
Query: 239 KTHENIVRIL 248
++ + L
Sbjct: 237 SVAKDAAKRL 246
>gi|255348513|ref|ZP_05380520.1| lipoprotein releasing systen, inner membrane component [Chlamydia
trachomatis 70]
gi|255503054|ref|ZP_05381444.1| lipoprotein releasing systen, inner membrane component [Chlamydia
trachomatis 70s]
gi|255506726|ref|ZP_05382365.1| lipoprotein releasing systen, inner membrane component [Chlamydia
trachomatis D(s)2923]
gi|296434740|gb|ADH16918.1| lipoprotein releasing systen, inner membrane component [Chlamydia
trachomatis E/150]
gi|296438458|gb|ADH20611.1| lipoprotein releasing systen, inner membrane component [Chlamydia
trachomatis E/11023]
Length = 503
Score = 52.1 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 36/257 (14%), Positives = 76/257 (29%), Gaps = 15/257 (5%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ E+++A++YL RK SI S S V + V +V MSV++G ++ +
Sbjct: 1 MKLELLLAFKYLIPKRKRLSSSIVSAFSIGIVALVVWLSVVFMSVIHGLQQ------RWV 54
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ ++ + I + +V L +
Sbjct: 55 GDLASLHSSIRIEPSDKYYESYYYQIDSHAEASQYVYKTIGEKLLC--EQTDPYDPDVDF 112
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
D R + + G + + + + D G
Sbjct: 113 LLPEAFPDPEFSDNGEMIDPVRTANERMLSLFSSRKGSFVEFEEGMGHVHMDRAFRGHKG 172
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
++ + + + + + + N NA S E ++ D +++ +
Sbjct: 173 EPRALSQYIAYSSDILYQQRVLPFEEIDYSTEVLNRFNASS--EGWLADFLVLQEKFRGM 230
Query: 245 VRILG-----NGVVVID 256
IL G V D
Sbjct: 231 SVILPVVYRDQGYRVGD 247
>gi|34557766|ref|NP_907581.1| transmembrane ATP-binding ABC transporter protein [Wolinella
succinogenes DSM 1740]
gi|81832842|sp|Q7M8U0|MACB_WOLSU RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|34483483|emb|CAE10481.1| PROBABLE TRANSMEMBRANE ATP-BINDING ABC TRANSPORTER PROTEIN
[Wolinella succinogenes]
Length = 643
Score = 52.1 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 29/245 (11%), Positives = 83/245 (33%), Gaps = 7/245 (2%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
E+ A + F + K + ++ +G++IGV ++IV++++ +G + +++R+ +
Sbjct: 249 LELFEAMKMAFRSLKMNL--FRTVLTLLGIVIGVASVIVMLAIGDGAKNAVLERISAMGT 306
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
++++ + P L IP+ ++ + + + S
Sbjct: 307 NILVIRPGMPNSRGFSNIATL--IPEDMEAIMELDNIIAAMPENKKSVTTRYGNNDQSTS 364
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYG---DVTPMGMG 183
+S N K A+ + + + + +
Sbjct: 365 LNATSSHFTKVRNWPLGKGVFFTEEDEKSYAKVVVLGKTVEKALFGEEDALGRFILVDNI 424
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ + + ++ ++ + L+ + + I V V D + +T
Sbjct: 425 MFQIIGVMSNRGASASGEDEDDVILVPYTTGSLHLIGQKFLRNITVAVDDLSRMGETERE 484
Query: 244 IVRIL 248
I +L
Sbjct: 485 IHSLL 489
>gi|237804498|ref|YP_002888652.1| lipoprotein releasing systen, inner membrane component [Chlamydia
trachomatis B/TZ1A828/OT]
gi|231272798|emb|CAX09704.1| lipoprotein releasing systen, inner membrane component [Chlamydia
trachomatis B/TZ1A828/OT]
Length = 503
Score = 52.1 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 31/235 (13%), Positives = 69/235 (29%), Gaps = 10/235 (4%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ E+++A++YL RK SI S S V + V +V MSV++G ++ +
Sbjct: 1 MKLELLLAFKYLIPKRKRLSSSIVSAFSMGIVALVVWLSVVFMSVIHGLQQ------RWV 54
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ ++ + I + ++ L +
Sbjct: 55 GDLASLHSSIRIEPSDKYYESYYYQIDSHAEASQYIYKTIGEKLLC--EQTDPYDPDVDF 112
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
D R + + G + + I + D G
Sbjct: 113 LLPEAFPDPEFSDNGEMIDPVRTANERMLSLFSSRKGSFVEFEEGIGHVHMDRAFRGHKG 172
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
++ + + + + + N NA S E ++ D +++
Sbjct: 173 EPRALSQYIAYSSDILYQQRVLPFEETDYSTEVLNRFNASS--EGWLADFLVLQE 225
>gi|153008589|ref|YP_001369804.1| ABC transporter-like protein [Ochrobactrum anthropi ATCC 49188]
gi|151560477|gb|ABS13975.1| ABC transporter related [Ochrobactrum anthropi ATCC 49188]
Length = 652
Score = 52.1 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 37/255 (14%), Positives = 88/255 (34%), Gaps = 20/255 (7%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A R L +N + ++ +G++IGV +++ ++++ G + ++ R+ + ++
Sbjct: 265 KMAMRALRAN------IFRTILTLLGIIIGVSSVVTMLAIGTGAQNSILDRINAMGTDLI 318
Query: 70 IQQKYYPLVD--------YQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ + A + +P++ +P V+G + + +
Sbjct: 319 LVRPSMAGFRGTGSIATLVPEDATAILELPNIKTAVPEVTGTVTLRRGNVDYQSQANGTV 378
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ + + + S+ + ++GK + + +P G +
Sbjct: 379 PAFSEAKSWKVATGDFISQSDLDNYAPVAVLGKTVVN------TLFPDGSNPIGQYILIQ 432
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
T+ + +V + L L + V I V VKD D I T
Sbjct: 433 KIPFQVIGTLEPKGAGFGGSDQDDVVIVPLSTGNLRLFGQKYVRTITVQVKDSDLINTTQ 492
Query: 242 ENIVRILGNGVVVID 256
E I +L D
Sbjct: 493 EQIQDLLDQRHKKQD 507
>gi|291548548|emb|CBL21656.1| ABC-type antimicrobial peptide transport system, permease component
[Ruminococcus sp. SR1/5]
Length = 410
Score = 52.1 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 35/277 (12%), Positives = 80/277 (28%), Gaps = 23/277 (8%)
Query: 3 IFSRFE-VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+ + +E + +A + +N+ +F ++ +G++IG+ ++I ++S+ G + M +
Sbjct: 1 MSNIYEYIKMAIHNIMANKGRSF------LTMLGIIIGIASVIAIVSIGEGTKNQMNSEI 54
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVI-------KVLPFVSGQAFVSGLSSGGS 114
I G + + Q D V +G+ +
Sbjct: 55 NDIGGGQIAVYCSDDAIADQVWIEPEDIDAVRELDGVEGVNVSDSYTGETVTGKGDFNLT 114
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
V + ++G + + VI D R G + +
Sbjct: 115 -VTGEAQDAKLVDNASVKYGSYFGQKEIEEGKNVCVISDADAKRLFGTDDVVGMTLDITC 173
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
D+T + G F D + + + I V
Sbjct: 174 YDLTKTFRICGVTTQKENGTFVSYTYDGMPVTINVPYTAMDDFTGSSGEFYQIIVQADKS 233
Query: 235 DAIEKTHENIVRIL--------GNGVVVIDWQQRYQI 263
+ + I+ +L V +Q +
Sbjct: 234 LDSQAVADKIINLLERRHQCAGDEYFQVQSFQDVMKS 270
>gi|30249074|ref|NP_841144.1| ATP-binding/permease fusion ABC transporter [Nitrosomonas europaea
ATCC 19718]
gi|81838740|sp|Q82VK1|MACB_NITEU RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|30138691|emb|CAD84992.1| probable ATP-binding/permease fusion ABC transporter [Nitrosomonas
europaea ATCC 19718]
Length = 659
Score = 52.1 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/238 (11%), Positives = 81/238 (34%), Gaps = 7/238 (2%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AWR ++ +R + ++ +G++IGV ++IV++++ G ++ +I ++ + ++
Sbjct: 275 AWRVMWIHRVR------TSLTLLGIVIGVASVIVMLAIGEGTKQRVIDQMGSMGTTIMYM 328
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
P + + +V ++ + + + I Y+
Sbjct: 329 SSDVPSTGGPVGVITEEDLDEVARLPEISRVMPVIGDPILVRHQNVDKQIYVFSSPYIMP 388
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTV 191
+ F + + + I ++ +P G +G +
Sbjct: 389 MVHHWRVAQGRFFTETEDRELAPVVVLGHKIYRSFFPHLSNPVGQYLLIGTSPFEVIGVM 448
Query: 192 LGMFRMRFPDYDNGMVYMSLQEAQ-LYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ MV++ + + + + I + D +++ E I +L
Sbjct: 449 AERGAESGSQNYDDMVFIPYRAGRARVYQAQEQPDYIVMEAASMDQVQEAEEAIRALL 506
>gi|29840287|ref|NP_829393.1| permease, putative [Chlamydophila caviae GPIC]
gi|29834635|gb|AAP05271.1| permease, putative [Chlamydophila caviae GPIC]
Length = 503
Score = 52.1 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 32/269 (11%), Positives = 68/269 (25%), Gaps = 18/269 (6%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ E+++A++YL +K +I S S + + IV +SV+ G + I + +
Sbjct: 1 MKLELLIAFKYLIPRKKRLSSAIVSLFSIGIISLVTWLSIVFISVIYGLEQRWIHDLSQL 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ V I Y + +R + + + S +
Sbjct: 61 HSPVKILPSSAYYDSYYYQIDRHADLSQYTTKTIGEKLASSFADPYDANSDYSLPENFPL 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ L + L GI + P +
Sbjct: 121 PDTTLNGELKDPVKVAFESLTPYLNQNQAQLLEFEEGIGYVQMDRVPHPNKSESRTFSQF 180
Query: 185 RSKSYTVLG------------------MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSG 226
+ + F ++ Y+ L
Sbjct: 181 VAYPSDEVYKSRVLPYEHTDYGSSILNPFNSSNEGWEKDFAYLQNTYRGASIILPINYRD 240
Query: 227 IEVFVKDPDAIEKTHENIVRILGNGVVVI 255
+ V D + + + + V VI
Sbjct: 241 MGYKVGDKGDLSIFSPETQKEIKHPVYVI 269
>gi|293375286|ref|ZP_06621568.1| efflux ABC transporter, permease protein [Turicibacter sanguinis
PC909]
gi|292646042|gb|EFF64070.1| efflux ABC transporter, permease protein [Turicibacter sanguinis
PC909]
Length = 396
Score = 52.1 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 39/256 (15%), Positives = 91/256 (35%), Gaps = 12/256 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F +I++W+ + N+ +F ++ +G++IGV ++I ++S++ G ++ +
Sbjct: 1 MFKE-SIIMSWQNIIYNKMRSF------LTILGIVIGVSSIIALISIVEGVTMEVTSQFS 53
Query: 63 GINGHVVIQQ---KYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
+ + + Q + L I +V + P +S V G V +
Sbjct: 54 ELGANKLTIQAKGTPLKKGLTDYEVQLLADIDEVNGISPTISTTTSVVGNGQVHDKVTIE 113
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
G + S F Y Q + S D + V + + + I +
Sbjct: 114 GKNASYFKYNQLALKSGRLLNSIDLSQQSNVALVSESLADTLYFGEQPI-GQYLLINGIS 172
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+ + + M V + Q L N ++ +EV++++ +++
Sbjct: 173 YRIVGVLEKTDQMDMMSSMSGKQSENRVIVPYQNLMGLVGL-NCINNVEVYMQNNANVDE 231
Query: 240 THENIVRILGNGVVVI 255
+ IL
Sbjct: 232 IIGKVELILNQAFNYK 247
>gi|254456764|ref|ZP_05070192.1| efflux ABC transporter, permease protein [Campylobacterales
bacterium GD 1]
gi|207085556|gb|EDZ62840.1| efflux ABC transporter, permease protein [Campylobacterales
bacterium GD 1]
Length = 406
Score = 52.1 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 34/265 (12%), Positives = 89/265 (33%), Gaps = 10/265 (3%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A + +F + + + + + M +V +S +G M++ L I
Sbjct: 2 FNLALKNIFFYKGRSITTFILTL------VSTMLFVVFVSWQDGSHNAMLENSLKIYTGA 55
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ D K+ +AF + + G + S +
Sbjct: 56 IEIYHKDYRDVGGNEYLIRDVKTITDKLSNINGIEAFSTRYETYGLLSSKEYSAASMVAG 115
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS-- 186
++ + +++ G+ + + G + +K+ + G S
Sbjct: 116 IEPQKEKLLSSIAIALKEGEFLDVNSGNCLYAGSELVNKLKLSIGDEVTFIGGASDNSFA 175
Query: 187 -KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ + G F+ ++D+ ++S +N S I + V++ D +E + I+
Sbjct: 176 ADIFKLCGTFKTGSFEFDSSASFVSRAYFDELMYAKNMASYITIKVENLDNVEIVNSEIL 235
Query: 246 RILGN-GVVVIDWQQRYQIFFSCYE 269
++L + + + W+ + E
Sbjct: 236 KVLDDENLESLTWKTLMKTMVEAME 260
>gi|76788866|ref|YP_327952.1| lipoprotein release inner membrane protein [Chlamydia trachomatis
A/HAR-13]
gi|76167396|gb|AAX50404.1| lipoprotein release inner membrane protein [Chlamydia trachomatis
A/HAR-13]
Length = 503
Score = 52.1 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 31/235 (13%), Positives = 69/235 (29%), Gaps = 10/235 (4%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ E+++A++YL RK SI S S V + V +V MSV++G ++ +
Sbjct: 1 MKLELLLAFKYLIPKRKRLSSSIVSAFSMGIVALVVWLSVVFMSVIHGLQQ------RWV 54
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ ++ + I + ++ L +
Sbjct: 55 GDLASLHSSIRIEPSDKYYESYYYQIDSHAEASQYIYKTIGEKLLC--EQTDPYDPDVDF 112
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
D R + + G + + I + D G
Sbjct: 113 LLPEAFPDPEFSDNGEMIDPVRTANERMLSLFSSRKGSFVEFEEGIGHVHMDRAFRGHKG 172
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
++ + + + + + N NA S E ++ D +++
Sbjct: 173 EPRALSQYIAYSSDILYQQRVLPFEETDYSTEVLNRFNASS--EGWLADFLVLQE 225
>gi|325842577|ref|ZP_08167748.1| efflux ABC transporter, permease protein [Turicibacter sp. HGF1]
gi|325489621|gb|EGC91985.1| efflux ABC transporter, permease protein [Turicibacter sp. HGF1]
Length = 396
Score = 52.1 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 38/256 (14%), Positives = 91/256 (35%), Gaps = 12/256 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F +I++W+ + N+ +F ++ +G++IGV ++I ++S++ G ++ +
Sbjct: 1 MFKE-SIIMSWQNIIYNKMRSF------LTILGIVIGVSSIIALISIVEGVTMEVTSQFS 53
Query: 63 GINGHVVIQQ---KYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
+ + + Q + L I +V + P +S V G V +
Sbjct: 54 ELGANKLTIQAKGTPLKKGLTDYEVQLLADIDEVNGISPTISTTTSVVGNGQVHDKVTIE 113
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
G + S F Y Q + S D + + + + + I +
Sbjct: 114 GKNASYFKYNQLALKSGRLLNSIDLSQQSNLALVSESLADTLYFGEQPI-GQYLLINGIS 172
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+ + + M V + Q L N ++ +EV++++ +++
Sbjct: 173 YRIVGVLEKTDQMDMMSSMSGKQSENRVIVPYQNLMGLVGL-NCINNVEVYMQNNANVDE 231
Query: 240 THENIVRILGNGVVVI 255
+ IL
Sbjct: 232 IIGKVELILNQAFNYK 247
>gi|153805798|ref|ZP_01958466.1| hypothetical protein BACCAC_00034 [Bacteroides caccae ATCC 43185]
gi|149130475|gb|EDM21681.1| hypothetical protein BACCAC_00034 [Bacteroides caccae ATCC 43185]
Length = 357
Score = 52.1 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/95 (23%), Positives = 35/95 (36%)
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
P R Y+ +F + YD + SL + + VS IE+ +K
Sbjct: 128 NMANPGASFKRDYLYSPGVVFVVNQQLYDGKYILTSLDFIRQLLDYTTEVSAIELKLKSG 187
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ I ++LG+ VV D Q+ F E
Sbjct: 188 ANVSSVQSKIEKMLGDDFVVQDRYQQQADVFRIME 222
>gi|158320236|ref|YP_001512743.1| hypothetical protein Clos_1201 [Alkaliphilus oremlandii OhILAs]
gi|158140435|gb|ABW18747.1| protein of unknown function DUF214 [Alkaliphilus oremlandii OhILAs]
Length = 397
Score = 51.7 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/257 (13%), Positives = 89/257 (34%), Gaps = 13/257 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + ++W+ + SN+ +F ++ +G++IGV ++I +++++ G ++ +
Sbjct: 1 MIRE-SIKMSWQNILSNKMRSF------LTTLGIIIGVTSIIALITIVEGVTGEVTNQFA 53
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ +I Q Y + + L+ + V V + + + I
Sbjct: 54 SLGAGKIIVQAYGTPLKQGLSDSDLEKLMAVENVSGISPTLTVNATVVRNKTLEEKVSID 113
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVI----IGKDLARNLGISIGDKINILSPYGDVT 178
+ Y +N+ + + + I + L L + G
Sbjct: 114 GKNEIYFKNNSDLIIRGRALNILDMENKNRVTVINQALEEILFFGENSIGKTIQINGITY 173
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+ + + T + M +G + A + N +S +EV + D D +
Sbjct: 174 QVVGVLDEGAITDVNSM-MAAGMGSDGKAVIPYTTAMRIAGV-NNISSLEVLITDTDKAD 231
Query: 239 KTHENIVRILGNGVVVI 255
+ ++ +L
Sbjct: 232 EVISSVELVLNEAFNYK 248
>gi|227536520|ref|ZP_03966569.1| ABC superfamily ATP binding cassette transporter, permease
[Sphingobacterium spiritivorum ATCC 33300]
gi|227243597|gb|EEI93612.1| ABC superfamily ATP binding cassette transporter, permease
[Sphingobacterium spiritivorum ATCC 33300]
Length = 383
Score = 51.7 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/243 (14%), Positives = 87/243 (35%), Gaps = 8/243 (3%)
Query: 31 ISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKY----YPLVDYQFIANR 86
++ +++ + A+I+ ++V+ GF++++ ++ G G +++ ++ Y R
Sbjct: 3 VTVSAIVLAIAAMILSVAVLRGFKDEITEKQRGFFGDILVTKQDLNSSYENTPMSLSKAR 62
Query: 87 LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDR 146
+D I V ++ G V + + DF+
Sbjct: 63 MDAIRTSPNVQSIYPFATKAGIMNVNGEVEGVLLKGVDSTYDQRYLSKTIVEGDTIDFNA 122
Query: 147 GKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGM 206
G ++ + K+ + + +R + + V G+F + D
Sbjct: 123 ENGANTQILISSYFAKRMRLKL---GDDFIMYFVQEPVRKRKFVVKGIFNTGSQELDKVY 179
Query: 207 VYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFF 265
V +L + NL++ G E+ V+D + + T E + L + + ++ F
Sbjct: 180 VVGALSLIRRLNNLDDQEAGGYEIRVRDFEKLVPTTEQVNDHLPIDLNARNIVEQMPDIF 239
Query: 266 SCY 268
Sbjct: 240 EWL 242
>gi|218778450|ref|YP_002429768.1| hypothetical protein Dalk_0595 [Desulfatibacillum alkenivorans
AK-01]
gi|218759834|gb|ACL02300.1| protein of unknown function DUF214 [Desulfatibacillum alkenivorans
AK-01]
Length = 407
Score = 51.7 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/270 (15%), Positives = 92/270 (34%), Gaps = 20/270 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +AWR ++ + + S ++ + + + L+ ++S G E MI + ++
Sbjct: 4 LKLAWRNIWRHTRR------SILTMMAIGFASLLLVFMLSFQFGSYEGMIDASVRLSTGH 57
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLS--------SGGSGVLVRG 120
+ Q + + + + +A + GV++ G
Sbjct: 58 LQVQAQGYHDKPEMRKVVTNPREVMDALTRNPGVEACTARCQTFVLASSEDRTRGVMIMG 117
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ S + + S D VIIG +A L I +G+++ IL D +
Sbjct: 118 VDPETESRVLKTSSLIRQGDYLSSDDPNTVIIGALMAERLKIGLGEELTILGQARDGSIA 177
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ + F+ + D V M L + F ++ AV + V + +
Sbjct: 178 ATVMTVRGI-----FKSGIDEVDRSTVQMLLTDFDQLFGMDGAVHAVVAVVHKLTEVGEV 232
Query: 241 HENI-VRILGNGVVVIDWQQRYQIFFSCYE 269
+ G+ V+DW + +
Sbjct: 233 KRALMQDSALKGLAVLDWMELSPGLKQSIQ 262
>gi|326773820|ref|ZP_08233102.1| ABC lipoprotein transporter, permease component [Actinomyces
viscosus C505]
gi|326635959|gb|EGE36863.1| ABC lipoprotein transporter, permease component [Actinomyces
viscosus C505]
Length = 860
Score = 51.7 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/259 (15%), Positives = 76/259 (29%), Gaps = 11/259 (4%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
VAWR + ++ K F ++ VM+GV L +++ E +
Sbjct: 4 VAWRSVRAHAKQFF------LTTFAVMLGVAFLSGTLALRASMSETFSNLTSSTVTSDLY 57
Query: 71 QQKYYPLVDYQFIANRLDF-IPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
Q ++ P + + V + V SN
Sbjct: 58 AQGPKIAGSGDDSSSSSQPTQPIDSSLTEQIKQIDGVEAANPSVQMAGVLVGSNDAPVTT 117
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
+ + F N+ A + + G N GD T + +
Sbjct: 118 TGAPTLFIPLYDNEKGLTWAQGHKPQGAGEIALESGALKNSGLKVGDKTHIVVQGSPTEV 177
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
TV+G F +V + + V+ I V V +++ I +IL
Sbjct: 178 TVVGEFHYESSMASATVVGVDPNWLMPIAAPDGKVTTIAVDVAQGSSVDTVKSEITKILP 237
Query: 250 NGVVVID----WQQRYQIF 264
+G V +++ +
Sbjct: 238 DGAQVQTRAEVIKEQNKAI 256
>gi|218463332|ref|ZP_03503423.1| putative ABC transporter, permease protein [Rhizobium etli Kim 5]
Length = 400
Score = 51.7 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/256 (14%), Positives = 92/256 (35%), Gaps = 11/256 (4%)
Query: 3 IFSRFE-VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+F FE + +A R + N +F ++ +GV+IGV A+I ++++ NG + +
Sbjct: 1 MF--FETLKLALRAISRNMLRSF------LTVLGVVIGVAAVIALVTIGNGTTAQVSTEL 52
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ +++ + + + DV + + G V+ L+ + V+ G
Sbjct: 53 SRLGTNMLFVRPGQFGPGRASSEAKRFSVKDVAAIRDQIGGLRAVAPLNQSTATVIFGGQ 112
Query: 122 SNSD--FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
++S + + F N++ + G+ P G
Sbjct: 113 NHSTSVYGTTNDYFVAQDWNLALGRNFTPAEERGQSRCIIGETVRSQLFGAADPIGQQIR 172
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+G + + + +V M ++ Q + + V I + +D + K
Sbjct: 173 VGKVSCPVIGVLARRGQSGMGTDQDDVVIMPVKVFQRRISGNSNVPQIVISARDGVSTAK 232
Query: 240 THENIVRILGNGVVVI 255
++ +L ++
Sbjct: 233 VQADVENLLRERRKIM 248
>gi|78187453|ref|YP_375496.1| lipoprotein releasing system [Chlorobium luteolum DSM 273]
gi|78167355|gb|ABB24453.1| lipoprotein releasing system [Chlorobium luteolum DSM 273]
Length = 422
Score = 51.7 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/277 (14%), Positives = 85/277 (30%), Gaps = 30/277 (10%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+AW +L ++ F ++ +GV +G L+ +SV G ++I +V+ +V
Sbjct: 7 FRIAWVHLRERKRQTF------LTALGVAVGSAMLVTTISVAKGSSANVISKVIDTVPNV 60
Query: 69 VIQQKYYPLVDYQFIANR---------LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
V++ + + + + + PD V+ G G +
Sbjct: 61 VVRAERVRVAVPDNVISPRPGRVSMVVKNVTPDRPLVIKDYLGVVQGISREKGLKEISPF 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
S V + G + L N + + + +
Sbjct: 121 VESRVIARNRSRFTPCVVKGVVPSLEAGIAGLEKNLLEPNALGELAYTSDGIILGDLLAA 180
Query: 180 MGMGIRSKSYTVLG------------MFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSG 226
++ F F D +++L A+ ++ NAV+G
Sbjct: 181 KLHASHGDRIVLVNRDGREFSATVVGRFSSGFNAKDEREAFVNLPLARRMEDVAPNAVTG 240
Query: 227 IEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQI 263
I + V+D + T + G W + +
Sbjct: 241 IGLSVEDVERASVTAAAVQAATG--YRSESWDETNRN 275
>gi|225010563|ref|ZP_03701034.1| protein of unknown function DUF214 [Flavobacteria bacterium
MS024-3C]
gi|225005392|gb|EEG43343.1| protein of unknown function DUF214 [Flavobacteria bacterium
MS024-3C]
Length = 401
Score = 51.7 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/236 (11%), Positives = 71/236 (30%), Gaps = 6/236 (2%)
Query: 39 GVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQ-----FIANRLDFIPDV 93
G++ +++ ++ G + ++V NG + I + V
Sbjct: 24 GMVMMLISVATGLGLNYKIREKVAAFNGDLQIISYETNTAHISGSPISKKQSFYPEFKSV 83
Query: 94 IKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIG 153
+ + + + + S ++ +
Sbjct: 84 PGITHIQGIITTPGIIRTEETFEGIVAKGVSTDYNWTAFKDFLISGRLPNYGDVLNNEVL 143
Query: 154 KDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQE 213
+++ + + + + + G++ F +D+ +++ L+
Sbjct: 144 ISDLVAQKLALKTGDTFRTFFIKNDQKSSVPSQRIFKIAGIYDSGFEAFDSSYIFVDLRH 203
Query: 214 AQLYFNLE-NAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
Q E + +S EVFV D D I++ + + + V ++RY F
Sbjct: 204 LQRISGWEADQISAFEVFVSDFDQIDQKTAEVYAATQSDLDVRSVKERYYNIFEWI 259
>gi|295689507|ref|YP_003593200.1| hypothetical protein Cseg_2117 [Caulobacter segnis ATCC 21756]
gi|295431410|gb|ADG10582.1| protein of unknown function DUF214 [Caulobacter segnis ATCC 21756]
Length = 418
Score = 51.7 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/271 (14%), Positives = 84/271 (30%), Gaps = 29/271 (10%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A +L + + ++ +GV IGV + V +M G ++D I+ ++ H+++
Sbjct: 10 IALAHLRVRARQ------TLVATLGVAIGVGFFLAVSGMMVGSQKDFIRTLVDSAPHIIV 63
Query: 71 QQKYYPLVDY------------------QFIANRLDFIPDVIKVLPFVSGQAFVSGLSSG 112
+ + V Q L P ++ +SG LS
Sbjct: 64 RDEQRRPVRQPALDAFPGAAVAVRGLRPQEEVRGLKDWPAMLADARAISGSLAAPSLSGA 123
Query: 113 GSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK---IN 169
+ + + + ++ G + +
Sbjct: 124 VTIAYAGRNAAVALNGVDPRLEGRLAKINESLTGGALNDLEARPDGIIISRPLADRLGAQ 183
Query: 170 ILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV 229
+ +P G R + ++ + + Y L+ AQ+ F + V+ I +
Sbjct: 184 LGDTLVVTSPTGALQRMRILALIEPDARAGFYAGDTVAYGLLRTAQVVFARPSIVNQIHI 243
Query: 230 FVKDPDAIEKTHENIVRILGNGVVVIDWQQR 260
+ D E + + G WQ+R
Sbjct: 244 RLADSADAEVQAKRLETRWG--YKWESWQER 272
>gi|302188918|ref|ZP_07265591.1| ABC transporter [Pseudomonas syringae pv. syringae 642]
Length = 657
Score = 51.7 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/249 (14%), Positives = 93/249 (37%), Gaps = 18/249 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +
Sbjct: 269 ALQAAWRVMWINR------FRTALTLLGIVIGVASVVVMLAVGEGSKRQVMAQMSSFGSN 322
Query: 68 VVIQQKYYPLVDYQFIANRLD------FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
++ P L+ +P+V ++P GQA V + S +
Sbjct: 323 IIYLNGKAPNPRAPKGVISLEEVAALGELPEVKMIMPVNGGQAGVRYGNVDHSSYVGGND 382
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
++ + Y + +++ + +IG + + L D + +V
Sbjct: 383 THFPAIFNWPVVEGSYFSEADEQNAAAVAVIGYKVRQKLFGEHTDPVGQYILIENVPFQV 442
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+G+ + G + F ++ I + +D + +++
Sbjct: 443 VGVLQEKGATSGDLDSDNRIAIP-----YSSASIRLFGTQDPE-YITIATRDANNVKQAE 496
Query: 242 ENIVRILGN 250
++I +L
Sbjct: 497 QSIRNLLQQ 505
>gi|289679876|ref|ZP_06500766.1| ABC transporter [Pseudomonas syringae pv. syringae FF5]
Length = 409
Score = 51.7 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/245 (14%), Positives = 92/245 (37%), Gaps = 18/245 (7%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +++
Sbjct: 25 AWRVMWINR------FRTALTLLGIVIGVASVVVMLAVGEGSKRQVMAQMSSFGSNIIYL 78
Query: 72 QKYYPLVDYQFIANRLD------FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
P L+ +P+V ++P GQA V + S + ++
Sbjct: 79 NGKAPNPRAPKGVITLEEVAALGQLPEVKMIMPVNGGQAGVRYGNVDHSSYVGGNDTHFP 138
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ Y + +++ + +IG + + L D + +V +G+
Sbjct: 139 AIFNWPVVEGSYFSEADEQNAAAVAVIGHKVRQKLFDEQTDPVGQYILIENVPFQVVGVL 198
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ G + F ++ I + +D + +++ ++I
Sbjct: 199 QEKGATSGDLDSDNRIAIP-----YSSASIRLFGTQDPE-YITIATRDANNVKQAEQSIR 252
Query: 246 RILGN 250
+L
Sbjct: 253 NLLQQ 257
>gi|303256228|ref|ZP_07342244.1| macrolide export ATP-binding/permease protein MacB [Burkholderiales
bacterium 1_1_47]
gi|302860957|gb|EFL84032.1| macrolide export ATP-binding/permease protein MacB [Burkholderiales
bacterium 1_1_47]
Length = 401
Score = 51.7 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/237 (13%), Positives = 79/237 (33%), Gaps = 9/237 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+++A R +F N S ++ +G++IGV A+I +++V NG + + ++ +
Sbjct: 5 ALLLALRQIFRNPMR------SILTVLGIVIGVAAVITMVTVGNGATQQVRDQIASLGSD 58
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
++ + L Q + D + ++G V+ + V+ G + S
Sbjct: 59 SLMIRPGQRLGPGQSVGAPSFKESDAEALATQIAGIKAVAPSRTSTQVVVANGKNWSTSV 118
Query: 128 YLQNSFSRFYGNVSND---FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ N++ + G + + G + +
Sbjct: 119 IGTTNDYFSINNLTIQEGRNFEQSELRAGSAVCVIGQTVKKELFENHDALGKLLRVKGFS 178
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ + + +V + L Q + + I V V+ IE+
Sbjct: 179 CQIIGELEQKGQSGMGMDKDDVVIIPLNTFQRRISGNVRIPLITVAVEPGSDIERVK 235
>gi|297616297|ref|YP_003701456.1| hypothetical protein Slip_0091 [Syntrophothermus lipocalidus DSM
12680]
gi|297144134|gb|ADI00891.1| protein of unknown function DUF214 [Syntrophothermus lipocalidus
DSM 12680]
Length = 408
Score = 51.7 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/245 (13%), Positives = 87/245 (35%), Gaps = 10/245 (4%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
L +N+ +F ++ +G++IGV A+IV+ ++ +G +E ++ R+ + +
Sbjct: 19 LKANKLRSF------LTMLGIIIGVAAVIVMTAIGHGTQEQVLSRINQLGADRLTVMPGG 72
Query: 76 PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSR 135
+ + + +S V+ + G V S+
Sbjct: 73 GGQFGRGNPQATKLTMSDAEDIAKLSSVKAVAPVVRLGILVTRANYSSETSITGTTPDIA 132
Query: 136 FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMF 195
++ R K + + N+ + + ++ ++ V+G+
Sbjct: 133 QISSLVIQEGRFISEQDVKSMRPVAVLGQTAYENLFPAGANPIGAEIRMQGVAFKVVGLL 192
Query: 196 RM---RFPDYDNGMVYMSLQEAQ-LYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNG 251
+ + ++Y+ + AQ ++ ++ + + + P A E+ I +L
Sbjct: 193 ASVGAQEMTDQDDVIYVPITTAQIRLLGTQDRINSLIIQAQSPQATEQAQTEITALLRKA 252
Query: 252 VVVID 256
+ D
Sbjct: 253 HGLTD 257
>gi|149922452|ref|ZP_01910885.1| ABC-type transport system involved in lipoprotein release permease
component-like protein [Plesiocystis pacifica SIR-1]
gi|149816732|gb|EDM76223.1| ABC-type transport system involved in lipoprotein release permease
component-like protein [Plesiocystis pacifica SIR-1]
Length = 421
Score = 51.7 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/290 (14%), Positives = 83/290 (28%), Gaps = 35/290 (12%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F F +AWR ++ N + S ++ I + +I+ + NG+ E + +L
Sbjct: 1 MFDDF--KLAWRNVWRNTRR------SVVTMAAAAIALFVMILYTGLANGYLERLEGTIL 52
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ L + G + + V +
Sbjct: 53 DLEVGDAQVFAEGYREKPSLYTAIRAGEGQDEGALDAAFAKLEAEGFEAAPRLLGVGLGA 112
Query: 123 NSDF-------------SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN 169
+ D GV+IG LA +LG+ +G ++
Sbjct: 113 SEDNSAGIQMIGIDVAADKDVGKIHERVFEGEWLSADEPGVVIGHRLADSLGLEVGGELV 172
Query: 170 ILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV 229
+LS D + + D V+M ++ + V + +
Sbjct: 173 VLSQGADGSMANDLYPVRGILGG-----VSERVDRAGVFMRGEDFRELMVFYEGVHQVIL 227
Query: 230 FV-KDPDA--------IEKTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
V + PDA E+ + V W++ S E+
Sbjct: 228 RVPEQPDAPDKGLKAGAERAQAILDEAGVEQAQVSTWRELQPGLASMLET 277
>gi|189424860|ref|YP_001952037.1| hypothetical protein Glov_1801 [Geobacter lovleyi SZ]
gi|189421119|gb|ACD95517.1| protein of unknown function DUF214 [Geobacter lovleyi SZ]
Length = 412
Score = 51.7 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/267 (13%), Positives = 82/267 (30%), Gaps = 21/267 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN-GH 67
+A R L ++ ++ V +GV+ ++V S+ F++ MI ++ GH
Sbjct: 5 FKIALRNLLRYKRRTALTATL------VTLGVIFVLVFTSIAGSFKQMMISQITDSMLGH 58
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ I +K Y N K+ + + V+ S + +
Sbjct: 59 LQIHRKGYVAAIESLPLNMNMKQAGFDKLEKLLKQEQGVAAYSPRIKFGGMFSNFMETTN 118
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
N + + + K L + + ++ T + +
Sbjct: 119 IRLNGIDPQKEFATVPLLPDRIISGEKSLKKGDILVPELLARGMNVKVGDTVVIVATNQN 178
Query: 188 SYTVLGMFRMRFPDYDNG-----MVYMSLQEAQLYFNLEN-AVSGIEVFVKDPDAIEKTH 241
FR+ Y+ +A +E +S + V +K A+ K
Sbjct: 179 GSVNGKQFRISGILESATGPGGRDGYVHFDDAIELLRMEQPEISEVAVRLKKFSALNKVA 238
Query: 242 ENIVRILGNG--------VVVIDWQQR 260
+++ +++ + W+
Sbjct: 239 KSLRQVVAAEKNPMGKPLFELHSWEDL 265
>gi|297538251|ref|YP_003674020.1| hypothetical protein M301_1059 [Methylotenera sp. 301]
gi|297257598|gb|ADI29443.1| protein of unknown function DUF214 [Methylotenera sp. 301]
Length = 405
Score = 51.7 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/273 (13%), Positives = 89/273 (32%), Gaps = 23/273 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
++A R + N +F ++ +G++IGV A+I ++++ NG + + ++ + ++
Sbjct: 6 FMLALRSVRRNLLRSF------LTILGIVIGVAAVITMVTLGNGATQAIKTQISSLGTNL 59
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
++ + + V + G S V V + S
Sbjct: 60 LMVNPGQRQPGGGGGGGGVPQFTEADAVAIQSEIGGVAAVAPQGRSSVTVIANGRNWSST 119
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ S + ++ + G+ + A IG+ + G + G+G + +
Sbjct: 120 VYGSTNAWFLTGNWKLASGRIFDPEEQTAGAAVCVIGETVRRELYAGKIGQTGLGEQLRI 179
Query: 189 YTVLGMFR-------MRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ +V + L Q VS + V ++D
Sbjct: 180 KQFSCTVVGILNAKGQGGMGDQDDVVLVPLHTLQRRVTGSLKVSTLLVSMEDGRDSGPLK 239
Query: 242 ENIVRIL----------GNGVVVIDWQQRYQIF 264
++ +L + + D QQ +
Sbjct: 240 ASLRDLLRERRKLAENDDDNFNIFDTQQLAETL 272
>gi|257461381|ref|ZP_05626477.1| macrolide export ATP-binding/permease protein MacB [Campylobacter
gracilis RM3268]
gi|257441104|gb|EEV16251.1| macrolide export ATP-binding/permease protein MacB [Campylobacter
gracilis RM3268]
Length = 642
Score = 51.7 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/256 (11%), Positives = 74/256 (28%), Gaps = 7/256 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++ +FS++ S ++ +G++IG+ ++I V+++ NG +E +I ++ I +
Sbjct: 252 SFKMSISAIFSHKLR------SILTMLGIIIGIASVICVVALGNGSQERIISQIRAIGTN 305
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + I D + + G+ S +
Sbjct: 306 TINIYPGKNFGDVRAGFVSTLTISDSKVLARQPYVDYATPNSYASGTITYANLSSKAQLR 365
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ G + I + + K + + R
Sbjct: 366 GGGVNSLAVNGIDIEEGRNFSDDDIKNSASVVIIDPNTKKTFFKNTDPIGKTILFLGRPL 425
Query: 188 SYTVLGMFRMRFPDYDNG-MVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ +Y + + + I + +KD E++ +
Sbjct: 426 KIIGVSGKDKNAFGSSENLRIYAPYSTVMNKISGDRKIGSITIKIKDDVDTHVAEESLTQ 485
Query: 247 ILGNGVVVIDWQQRYQ 262
+L D+
Sbjct: 486 LLIQRHGSRDFHTMNA 501
>gi|297616421|ref|YP_003701580.1| hypothetical protein Slip_0226 [Syntrophothermus lipocalidus DSM
12680]
gi|297144258|gb|ADI01015.1| protein of unknown function DUF214 [Syntrophothermus lipocalidus
DSM 12680]
Length = 395
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/262 (12%), Positives = 83/262 (31%), Gaps = 19/262 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A ++ N+ +F ++ +G++IGV A+I+V+++ G R ++ + I
Sbjct: 6 SIRIALEGIWVNKMRSF------LTMLGIVIGVAAVILVVAIGQGGRSKLLSEMEQIGST 59
Query: 68 VVIQQKY-----YPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ + + + I + + + ++ ++ G
Sbjct: 60 LFVIYIQSVSTDTVTDSERINLQDIRVIKERVPAILALAPSSYEYAEVKSRRGSKQVLAV 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ +++ + V + +G+ + + +
Sbjct: 120 GTTGDFVKVRNLDLARGRFFSEIDNRAVR----RVAVIDEKLGENLFGRADPIGKKILLK 175
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ V F + VY+ Q FN + V +E + D + + +
Sbjct: 176 NTPTLVIGVAKAGESIFMEGQVRNVYIPFSYWQSLFN-SSRVDQLEGKAVNKDRVNEAVK 234
Query: 243 NIVRILGNGVVVIDWQQRYQIF 264
IL D RY F
Sbjct: 235 QAKNILNRRHHTTD---RYSSF 253
>gi|153833609|ref|ZP_01986276.1| ABC-type transport system, involved in lipoprotein release,
permease component [Vibrio harveyi HY01]
gi|148870136|gb|EDL69083.1| ABC-type transport system, involved in lipoprotein release,
permease component [Vibrio harveyi HY01]
Length = 422
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/284 (15%), Positives = 86/284 (30%), Gaps = 28/284 (9%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M V +AW L NR+ S +S + + I V AL + + +
Sbjct: 1 MGKLIPVSVRLAWLNLQRNRRR------SLLSMLIIAIAVFALTSAGGFGLYTYDSLKES 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIA-----------NRLDFIPDVIKVLPFVSGQAFVSGL 109
GH+ + Y + + +L + +V V P V +S
Sbjct: 55 TARDTGHLTLTTPGYFAKEEEMPLSNGLTHADDITKQLIGLNEVRGVQPRVEFSGLISNG 114
Query: 110 SSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN 169
+ + + R +SN + + +
Sbjct: 115 NKSSIFIGIGVNEREFDMKGPFLDVREGQTLSNIHASRYDPAEPEVMLGVDLANNLSVHV 174
Query: 170 ILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV 229
T + + + V G++ P+ D +Y+ + AQ + VS + V
Sbjct: 175 GDWITLLATTTDGALNAYDFKVRGIYSTGVPELDKRQLYVHINSAQSLLG-SDKVSALSV 233
Query: 230 FVKDPDAIEKTHENIVRILG--------NGVVVIDWQQRYQIFF 265
F+ D + + + +L + + WQ+R FF
Sbjct: 234 FLFDTSLTNQVEQQVASVLSKQKQNFGEQDIEITPWQER--AFF 275
>gi|30250174|ref|NP_842244.1| hypothetical protein NE2242 [Nitrosomonas europaea ATCC 19718]
gi|30180969|emb|CAD86154.1| DUF214 [Nitrosomonas europaea ATCC 19718]
Length = 403
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/264 (14%), Positives = 92/264 (34%), Gaps = 23/264 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING-H 67
+A R + + + +++A+ I+ GV +I+ + + + ++ H
Sbjct: 2 FKLALRNILRQKTHTLMTLAAVIA------GVTGIILAGGWVQDIYVQLGEALIHSQSGH 55
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIK---------VLPFVSGQAFVSGLSSGGSGVLV 118
+ I ++ Y + L PD I+ + ++
Sbjct: 56 LQIYRQGYYEAGSRSPEKYLIDTPDTIRQQIAGETEVAQVMARLNFSGLLNNGKSDLPII 115
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
S + + G+++GK +A+ L + GD + +L D
Sbjct: 116 GEGVEPSHEVKLGSSVQITAGRQLSDEDTFGILLGKGVAQALQLKPGDPVTLLVNTLDG- 174
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+ S + V G+F+ D+D V + L AQ + V+ + + +K + +
Sbjct: 175 ----ALNSLDFQVTGIFQSFSNDFDARAVRIPLAAAQELLGTQG-VNALVISLKHTEETD 229
Query: 239 KTHENIVRIL-GNGVVVIDWQQRY 261
+ + + L + + V W +
Sbjct: 230 QIAAQLKQSLGPSDLEVKTWVELN 253
>gi|156978223|ref|YP_001449129.1| efflux ABC transporter ATP-binding/permease [Vibrio harveyi ATCC
BAA-1116]
gi|156529817|gb|ABU74902.1| hypothetical protein VIBHAR_07028 [Vibrio harveyi ATCC BAA-1116]
Length = 422
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/284 (15%), Positives = 86/284 (30%), Gaps = 28/284 (9%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M V +AW L NR+ S +S + + I V AL + + +
Sbjct: 1 MGKLIPVSVRLAWLNLQRNRRR------SLLSMLIIAIAVFALTSAGGFGLYTYDSLKES 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIA-----------NRLDFIPDVIKVLPFVSGQAFVSGL 109
GH+ + Y + + +L + +V V P V +S
Sbjct: 55 TARDTGHLTLTTPGYFAKEEEMPLSNGLTHADDITKQLIGLNEVRGVQPRVEFSGLISNG 114
Query: 110 SSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN 169
+ + + R +SN + + +
Sbjct: 115 NKSSIFIGIGVNEREFDMKGPFLDVREGQTLSNIHALRYDPAEPEVMLGVDLANNLSVHV 174
Query: 170 ILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV 229
T + + + V G++ P+ D +Y+ + AQ + VS + V
Sbjct: 175 GDWITLLATTTDGALNAYDFKVRGIYSTGVPELDKRQLYVHINSAQSLLG-SDKVSALSV 233
Query: 230 FVKDPDAIEKTHENIVRILG--------NGVVVIDWQQRYQIFF 265
F+ D + + + +L + + WQ+R FF
Sbjct: 234 FLFDTSLTNQVEQQVASVLSKNKQNFGDQDIEITPWQER--AFF 275
>gi|322419224|ref|YP_004198447.1| hypothetical protein GM18_1707 [Geobacter sp. M18]
gi|320125611|gb|ADW13171.1| protein of unknown function DUF214 [Geobacter sp. M18]
Length = 386
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/244 (12%), Positives = 67/244 (27%), Gaps = 15/244 (6%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+ R + R + +G+ IG+ + + +S+ + ++ + + ++V
Sbjct: 5 KLVIRNITRRRGRF------VFTLMGITIGIASFVTFLSMGGSLKSEINRESAALGANLV 58
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ + I ++ + + +
Sbjct: 59 VTPIGSCAYEQVSILTGEILPSNITMSEVSKIRAINGVIAVPVLTEKSAINNKPVSLNGI 118
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
+ L + K+ +P +T G K
Sbjct: 119 DVVQMMKFKGWRIAKGSYFSGHDDASLVVGSAAADLFKL---APGSTITVRGEQFMVKGV 175
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
D+ +++ L EAQ FN + VS + V D +E + I
Sbjct: 176 LQ------ETGGRDDLTIFLPLVEAQRLFNTGDTVSYVAAKVDDLANLEGYIQQIREATN 229
Query: 250 NGVV 253
GVV
Sbjct: 230 LGVV 233
>gi|330941979|gb|EGH44674.1| ABC transporter [Pseudomonas syringae pv. pisi str. 1704B]
Length = 656
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/245 (14%), Positives = 92/245 (37%), Gaps = 18/245 (7%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +++
Sbjct: 272 AWRVMWINR------FRTALTLLGIVIGVASVVVMLAVGEGSKRQVMAQMSSFGSNIIYL 325
Query: 72 QKYYPLVDYQFIANRLD------FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
P L+ +P+V ++P GQA V + S + ++
Sbjct: 326 NGKAPNPRAPKGVITLEEVAALGELPEVKMIMPVNGGQAGVRYGNVDHSSYVGGNDTHFP 385
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ Y + +++ + +IG + + L D + +V +G+
Sbjct: 386 AIFNWPVVEGSYFSEADEQNAAAVAVIGHKVRQKLFDEQTDPVGQYILIENVPFQVVGVL 445
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ G + F ++ I + +D + +++ ++I
Sbjct: 446 QEKGATSGDLDSDNRIAIP-----YSSASIRLFGTQDPE-YITIATRDANNVKQAEQSIR 499
Query: 246 RILGN 250
+L
Sbjct: 500 NLLQQ 504
>gi|254227460|ref|ZP_04920892.1| ABC-type transport system, involved in lipoprotein release,
permease component [Vibrio sp. Ex25]
gi|262396275|ref|YP_003288128.1| ABC-type transport system involved in lipoprotein release permease
component [Vibrio sp. Ex25]
gi|151940072|gb|EDN58898.1| ABC-type transport system, involved in lipoprotein release,
permease component [Vibrio sp. Ex25]
gi|262339869|gb|ACY53663.1| ABC-type transport system involved in lipoprotein release permease
component [Vibrio sp. Ex25]
Length = 422
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 45/284 (15%), Positives = 86/284 (30%), Gaps = 28/284 (9%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M V +AW L NR+ S +S + + I V AL + + +
Sbjct: 1 MGKLIPVSVRLAWLNLQRNRRR------SLLSMLIIAIAVFALTSAGGFGLYTYDSLKES 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIA-----------NRLDFIPDVIKVLPFVSGQAFVSGL 109
GH+ + Y + + +L + +V V P V +S
Sbjct: 55 TARDTGHLTLTTPGYFAKEEEMPLSNGLTHADDITKQLIGLNEVRGVQPRVEFSGLISNG 114
Query: 110 SSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN 169
+ + + R +SN + + +
Sbjct: 115 NKSSIFIGIGVNEREFDMKGPFLDVREGQTLSNIHASRYDPAEPEVMLGVDLANNLSVHV 174
Query: 170 ILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV 229
T + + + V G++ P+ D +Y+ + AQ + VS + V
Sbjct: 175 GDWITLLATTTDGALNAYDFKVRGIYSTGVPELDKRQLYVHINSAQSLLG-SDKVSALSV 233
Query: 230 FVKDPDAIEKTHENIVRILG--------NGVVVIDWQQRYQIFF 265
F+ D K + + +L + + WQ+R FF
Sbjct: 234 FLFDTSLTSKVEQQVASVLSKQKQNLGAQDIEITPWQER--AFF 275
>gi|313143725|ref|ZP_07805918.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
gi|313128756|gb|EFR46373.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
Length = 386
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 48/138 (34%), Gaps = 2/138 (1%)
Query: 134 SRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLG 193
NV + ++IGK N G+ + DK+++ + + G +K + + G
Sbjct: 109 HIREQNVLAFSQKEFSILIGKGFEENFGLEVNDKLDLFFTQLEPSGFGYTPITKRFNIAG 168
Query: 194 MFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDP-DAIEKTHENIVRILGNG 251
F YD Y +L Q L GI + P + I +
Sbjct: 169 FFESGLRAYDEAYTYTNLSALQKIRRLPPGIYDGIHIHTPKPMEDITPIRNFLEIEFPQR 228
Query: 252 VVVIDWQQRYQIFFSCYE 269
+ W Q+ FFS E
Sbjct: 229 AGIEGWWQQNGNFFSAME 246
>gi|229042665|ref|ZP_04190405.1| ABC transporter permease protein [Bacillus cereus AH676]
gi|228726605|gb|EEL77822.1| ABC transporter permease protein [Bacillus cereus AH676]
Length = 385
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/240 (9%), Positives = 66/240 (27%), Gaps = 10/240 (4%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A +F+++ S ++ +G++IGV A+I ++S+ +G +++
Sbjct: 1 MALSSIFAHKMR------SILTMLGIIIGVSAIITIISIGDGTNAKFREQIGNEKKDQFS 54
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
+ Q + + + D + +
Sbjct: 55 VNYKTEDYSDMDGK---ISSSMYESISKISGVQEVYPDVKGKEKVYAGKKELDLDITGAK 111
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
+ + R + ++ + S + + +
Sbjct: 112 GDYFEDTSKFKLEHGRFLTAADLDRPEHTIVLNTDAFDKLYSSWEPNLYVDIKGTPYKVV 171
Query: 191 VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN 250
+ + +S + + F +N + V + E E +V+ L
Sbjct: 172 GVYSIKAMMGGMTFKEGVISAENWPVLFG-KNNYDSVTVKIAPGQDKETVQEAVVKSLNE 230
>gi|218663704|ref|ZP_03519634.1| putative ABC transporter, permease protein [Rhizobium etli IE4771]
Length = 400
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/256 (15%), Positives = 92/256 (35%), Gaps = 11/256 (4%)
Query: 3 IFSRFE-VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+F FE + +A R + N +F ++ +GV+IGV A+I ++++ NG + +
Sbjct: 1 MF--FETLKLALRAISRNMLRSF------LTVLGVVIGVAAVIALVTIGNGTTAQVSTEL 52
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ +++ + + + DV + + G V+ L+ + V+ G
Sbjct: 53 SRLGTNMLFVRPGQFGPGRASSEAKRFSVKDVAAIRDQIGGLRAVAPLNQSTATVISGGE 112
Query: 122 SNSD--FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
++S + + F N++ + G+ P G
Sbjct: 113 NHSTSVYGTTNDYFIAQDWNLALGRNFTPAEERGQSRCIIGETVRSQLFGAADPIGQQIR 172
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+G + + + +V M ++ Q + + V I + +D + K
Sbjct: 173 VGKVSCPVIGVLARRGQSGMGTDQDDVVIMPVKVFQRRISGNSNVPQIVISARDGVSTAK 232
Query: 240 THENIVRILGNGVVVI 255
++ +L +I
Sbjct: 233 VQADVENLLRERRKII 248
>gi|190891719|ref|YP_001978261.1| putative ABC transporter, permease protein [Rhizobium etli CIAT
652]
gi|190696998|gb|ACE91083.1| putative ABC transporter, permease protein [Rhizobium etli CIAT
652]
gi|327192137|gb|EGE59112.1| putative ABC transporter, permease protein [Rhizobium etli
CNPAF512]
Length = 400
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/256 (15%), Positives = 90/256 (35%), Gaps = 11/256 (4%)
Query: 3 IFSRFE-VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+F FE + +A R + N +F ++ +GV+IGV A+I ++++ NG + +
Sbjct: 1 MF--FETLKLALRAISRNMLRSF------LTVLGVVIGVAAVIALVTIGNGTTAQVSTEL 52
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ +++ + + + DV + + G V+ L+ + V+ G
Sbjct: 53 SRLGTNMLFVRPGQFGPGRASSEAKRFSVKDVAAIRDQIGGLRAVAPLNQSTATVIFGGQ 112
Query: 122 SNSDFSY--LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
++S + F N++ G+ P G
Sbjct: 113 NHSTSVSGTTNDYFIAQDWNLALGRTFTPAEERGQSRCIIGETVRSQLFGAADPLGQQIR 172
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+G + + + +V M ++ Q + + V I + +D + K
Sbjct: 173 VGKVSCPVIGVLAKRGQSGMGTDQDDVVIMPVKVFQRRISGNSNVPQIIISARDGVSTAK 232
Query: 240 THENIVRILGNGVVVI 255
++ +L +I
Sbjct: 233 VQADVENLLRERRKII 248
>gi|91222981|ref|ZP_01258247.1| hypothetical protein V12G01_04041 [Vibrio alginolyticus 12G01]
gi|91191794|gb|EAS78057.1| hypothetical protein V12G01_04041 [Vibrio alginolyticus 12G01]
Length = 422
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/284 (15%), Positives = 86/284 (30%), Gaps = 28/284 (9%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M V +AW L NR+ S +S + + I V AL + + +
Sbjct: 1 MGKLIPVSVRLAWLNLQRNRRR------SLLSMLIIAIAVFALTSAGGFGLYTYDSLKES 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIA-----------NRLDFIPDVIKVLPFVSGQAFVSGL 109
GH+ + Y + + +L + +V V P V +S
Sbjct: 55 TARDTGHLTLTTPGYFAKEEEMPLSNGLTHADDITKQLIGLNEVRGVQPRVEFSGLISNG 114
Query: 110 SSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN 169
+ + + R +SN + + +
Sbjct: 115 NKSSIFIGIGVNEREFDMKGPFLDVREGQTLSNIHASRYDPAEPEVMLGVDLANNLSVHV 174
Query: 170 ILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV 229
T + + + V G++ P+ D +Y+ + AQ + VS + V
Sbjct: 175 GDWITLLATTTDGALNAYDFKVRGIYSTGVPELDKRQLYIHINSAQSLLG-SDKVSALSV 233
Query: 230 FVKDPDAIEKTHENIVRILG--------NGVVVIDWQQRYQIFF 265
F+ D + + + +L + + WQ+R FF
Sbjct: 234 FLFDTSLTNQVEQQVASVLSKQKQNLGDQDIEITPWQER--AFF 275
>gi|75676231|ref|YP_318652.1| ABC transporter, ATPase subunit [Nitrobacter winogradskyi Nb-255]
gi|122064325|sp|Q3SQZ1|MACB_NITWN RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|74421101|gb|ABA05300.1| ABC transporter, ATPase subunit [Nitrobacter winogradskyi Nb-255]
Length = 645
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/237 (13%), Positives = 76/237 (32%), Gaps = 14/237 (5%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
+ ++ G++IGV +++ +M++ G + I+R I + ++ + N L
Sbjct: 273 TALTLSGIVIGVASVVAMMAIGRGAQASYIERASAIGTNWIV-----VDRAGESTGNSLP 327
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSN----DF 144
P + + + + + + I + + R N F
Sbjct: 328 LTPADAQAIKDMDNVSGSMPAMWDMATMRRGNIDLNTDVVATTAEFRTVHNWDMAKGTFF 387
Query: 145 DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDN 204
+ V G + ++ I P G + + + +
Sbjct: 388 TKQDEVSGGPVVLLGATLASKLFPGIADPSGSNILINNLPFLVTGVLESKGLSERGTDRD 447
Query: 205 GMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL-----GNGVVVID 256
M L+ A + ++ +S I V + D + +T E I +L + D
Sbjct: 448 KRAVMPLRTATMRLFGKDDLSEIVVSIADMSRLHETKEAIKALLIRRHGREDFYIYD 504
>gi|168183076|ref|ZP_02617740.1| putative ABC transporter, permease protein [Clostridium botulinum
Bf]
gi|182673765|gb|EDT85726.1| putative ABC transporter, permease protein [Clostridium botulinum
Bf]
Length = 427
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/284 (12%), Positives = 86/284 (30%), Gaps = 39/284 (13%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING---- 66
+ WR L + F ++ +GV+IG +A+ V++S+ NGF + M ++
Sbjct: 9 IIWRNLLKRKGRTF------LTMLGVIIGSIAIYVIISLGNGFEKYMSSQLNSFGDVNII 62
Query: 67 -----------HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSG 115
+ K + L+ + V +P ++ A ++ S
Sbjct: 63 NIFPYSDSTATYQGGNIKNRKKILNDKTLKELNKLEFVKYSIPKLNANADIAYKKSEMKS 122
Query: 116 VLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGD--------- 166
+ G+S ++S Y N S + + L + + +
Sbjct: 123 SNLTGMSFKNYSKDHELLFGKYPNDSKNEVVLGYKLAAYLLNKKDVDKVKEEETKKILRK 182
Query: 167 --KINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMS----LQEAQLYFNL 220
K+ + P K + + ++ + F
Sbjct: 183 KLKVKVYRPNEKGEEEWTTYTVKVSGICKQDFSDDYQIKAPLSFIKDILIYKNNDEKFLK 242
Query: 221 ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIF 264
I++ +K+ + + + + NG + ++
Sbjct: 243 NKGYESIDLVLKNQEKSSQAEKYLKD---NGYLYQSLKEMQNSI 283
>gi|134045719|ref|YP_001097205.1| hypothetical protein MmarC5_0679 [Methanococcus maripaludis C5]
gi|132663344|gb|ABO34990.1| protein of unknown function DUF214 [Methanococcus maripaludis C5]
Length = 397
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/251 (14%), Positives = 84/251 (33%), Gaps = 11/251 (4%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + A R + + +F++I GV+IG++A++ ++S+ G + +
Sbjct: 1 MKLTDVVSF--AGRNITQKKTQSFLTII------GVVIGILAIVSLISLGYGVQNYITGE 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ I +++ D D +K + V V S
Sbjct: 53 ITTIGANIISLIPSQNFGGPAVSKTFNDKDVDAVKSVRGVDEVVAVWLGSYELEYRDESI 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
N ++ S + + + ++ KG I + I G N D+
Sbjct: 113 YGN--ILVVEPSKFTYVYSTTWGYEPYKGRWIEDSDKYSCMIGYGLATNSFDDEIDIGDK 170
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+K + + +S Q F +++ + + V VK + + +
Sbjct: 171 ITINDTKYKVIGILEETG-NPATENSAILSKDVGQALFEIDDEYNRMIVSVKSGEDVLRV 229
Query: 241 HENIVRILGNG 251
E+I + + +
Sbjct: 230 SEDIQKEVEDS 240
>gi|88798149|ref|ZP_01113736.1| putative ABC transporter, permease protein [Reinekea sp. MED297]
gi|88779346|gb|EAR10534.1| putative ABC transporter, permease protein [Reinekea sp. MED297]
Length = 403
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/242 (13%), Positives = 71/242 (29%), Gaps = 7/242 (2%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A R + ++ +F ++ +G++IGV ++I V+S++ G E + + G + +
Sbjct: 11 ALRAIAVSKMRSF------LTSLGIIIGVASIIAVVSLVQGLEESITSQFEGYGSNSLFI 64
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
Q+ D + + + + G S + +
Sbjct: 65 QQRRDNYGRLIGDLTDDDLLKLKGIDGISAISPQTFVFEYSGVQYEGEQHSADVVGVMPD 124
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTV 191
+ +G + D++ + K V
Sbjct: 125 YAEMDSSYPELGRFITTTDADSRKKVAVIGPKVRDELGMPENPIGEFIQYGPHWLKVIGV 184
Query: 192 LGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGI-EVFVKDPDAIEKTHENIVRILGN 250
L + VY+ A + I V V+D + I+ E + + L
Sbjct: 185 LESKGQMMGQDLDNYVYIPYPTAVGIMGYQQQPFVIFVVRVEDVNRIDSITERVEQTLRR 244
Query: 251 GV 252
Sbjct: 245 NH 246
>gi|242309612|ref|ZP_04808767.1| ABC transporter [Helicobacter pullorum MIT 98-5489]
gi|239523613|gb|EEQ63479.1| ABC transporter [Helicobacter pullorum MIT 98-5489]
Length = 406
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/271 (10%), Positives = 91/271 (33%), Gaps = 17/271 (6%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A+R + N + ++ +GV+IGV A+I+++++ NG + + +R+ + +
Sbjct: 5 AFFLAFRQIRRNFLR------AILTMLGVIIGVGAVIIMITLGNGTTQVITERMSSLGSN 58
Query: 68 VVIQQKYYPLVD-----YQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+++ QF+ ++ + I L + + + + +
Sbjct: 59 ILLVFPARDQTPGKGGRKQFMLQDVEDLELQIGHLVRAIAPLSSTSVLAQFRQGNTQTQA 118
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + N + + ++P G +G
Sbjct: 119 QGINADYFIATNWEVTQGRNFTKEEYRAGSNVCIIGESVRKNLFNTSNVNPLGMRIKLGS 178
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN---AVSGIEVFVKDPDAIEK 239
+ + + + + ++ + L+ Q + + +S + + +KD
Sbjct: 179 IVCDCVGILESKGQGAMGNDQDDVILLPLKTYQRSISKSDSLYNISRLMISLKDEVDSTM 238
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYES 270
I L + + ++ + F ++
Sbjct: 239 AVREITEALRG---IRNIREGQKDDFEIMDT 266
>gi|220933156|ref|YP_002510064.1| ABC-type transport system, involved in lipoprotein release,
permease component [Halothermothrix orenii H 168]
gi|219994466|gb|ACL71069.1| ABC-type transport system, involved in lipoprotein release,
permease component [Halothermothrix orenii H 168]
Length = 415
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/257 (11%), Positives = 73/257 (28%), Gaps = 14/257 (5%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A++ L +RK + I+ + + V+ ++ S++ G + + V+ +
Sbjct: 5 KLAFKNLTRHRKR------TLITAAVIALAVVIYLMTDSLLIGMVDKSFENVIDFESGHI 58
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ + + + PD + +
Sbjct: 59 QIVNQNYWEEREDLPLKNLIRPDRELLTFLQKVDGLKGLTPVLTFSATLNNGIEEIPVVA 118
Query: 130 QNSFSRFYG-----NVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
Q + Y + + D +
Sbjct: 119 QGIDPQSYSQVLRAGEYLVEGEFLTGNKSTAVMGKTLAKLMDLKTGDYITLVIKSKEGTF 178
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + G+ P + +V++ L+ A+ N+ VS I + V+D +T +
Sbjct: 179 NTIDVQISGLVDSPNPSINENIVFVPLEIARQALNVRGMVSQIIIRVEDRIRAVETARLL 238
Query: 245 VRIL---GNGVVVIDWQ 258
L G+ + W+
Sbjct: 239 SDDLQEAGSSLRAFSWR 255
>gi|195941817|ref|ZP_03087199.1| hypothetical protein Bbur8_02909 [Borrelia burgdorferi 80a]
gi|218249818|ref|YP_002374608.1| lipoprotein releasing factor [Borrelia burgdorferi ZS7]
gi|221217442|ref|ZP_03588913.1| lipoprotein releasing factor [Borrelia burgdorferi 72a]
gi|223889206|ref|ZP_03623795.1| lipoprotein releasing factor [Borrelia burgdorferi 64b]
gi|224533040|ref|ZP_03673646.1| lipoprotein releasing factor [Borrelia burgdorferi WI91-23]
gi|224533940|ref|ZP_03674525.1| lipoprotein releasing factor [Borrelia burgdorferi CA-11.2a]
gi|225549301|ref|ZP_03770274.1| lipoprotein releasing factor [Borrelia burgdorferi 94a]
gi|225549685|ref|ZP_03770650.1| lipoprotein releasing factor [Borrelia burgdorferi 118a]
gi|226320729|ref|ZP_03796287.1| lipoprotein releasing factor [Borrelia burgdorferi 29805]
gi|226322010|ref|ZP_03797535.1| lipoprotein releasing factor [Borrelia burgdorferi Bol26]
gi|29468278|gb|AAO85481.1| lipoprotein releasing factor [Borrelia burgdorferi]
gi|218165006|gb|ACK75067.1| lipoprotein releasing factor [Borrelia burgdorferi ZS7]
gi|221192720|gb|EEE18936.1| lipoprotein releasing factor [Borrelia burgdorferi 72a]
gi|223885455|gb|EEF56556.1| lipoprotein releasing factor [Borrelia burgdorferi 64b]
gi|224512034|gb|EEF82429.1| lipoprotein releasing factor [Borrelia burgdorferi WI91-23]
gi|224512943|gb|EEF83309.1| lipoprotein releasing factor [Borrelia burgdorferi CA-11.2a]
gi|225369645|gb|EEG99093.1| lipoprotein releasing factor [Borrelia burgdorferi 118a]
gi|225370159|gb|EEG99599.1| lipoprotein releasing factor [Borrelia burgdorferi 94a]
gi|226232600|gb|EEH31354.1| lipoprotein releasing factor [Borrelia burgdorferi Bol26]
gi|226233945|gb|EEH32668.1| lipoprotein releasing factor [Borrelia burgdorferi 29805]
gi|312147928|gb|ADQ30587.1| lipoprotein releasing factor [Borrelia burgdorferi JD1]
gi|312149710|gb|ADQ29781.1| lipoprotein releasing factor [Borrelia burgdorferi N40]
Length = 417
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/260 (15%), Positives = 94/260 (36%), Gaps = 8/260 (3%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+ R + + + ++I +S + +G + +I+ +S+MNGF+ D +V
Sbjct: 6 FLLKRLILEEKNSLALTIVIILS---IALGEIIIILTISIMNGFQNDF----FLSITNVE 58
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
Q ++ I + + Q + + + + D
Sbjct: 59 SGNLKIENELTQEEIKKIKKIEGIKHINKIYETQGIGIQNYYYPTILNIIAVDIKDLKKD 118
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
QN S + +IIG L+ N + D + ++ T + + KS+
Sbjct: 119 QNFISFTGLEKDELDLKDNEIIIGNVLSHNFNLFENDPLELIITDEIKTLISLENDIKSF 178
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
+ +F+ + + +++M++ L N+ +V K+ + K E I + +
Sbjct: 179 KIKSIFKSNYAKINETLIFMNIDYFIKNKILHNSGINYQVKTKNLNPSNKLIEKI-KAVN 237
Query: 250 NGVVVIDWQQRYQIFFSCYE 269
+ W + + F+ +
Sbjct: 238 PKIKAKTWNEYNKEFYKILK 257
>gi|260902866|ref|ZP_05911261.1| ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037]
gi|308107835|gb|EFO45375.1| ABC transporter, permease protein [Vibrio parahaemolyticus AQ4037]
Length = 411
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/270 (15%), Positives = 88/270 (32%), Gaps = 26/270 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +AWR L+ N+ + I ++ G+M ++ ++ MNG + MIK +
Sbjct: 3 IKLAWRNLWRNKLR------TSIMLGAMVFGLMGVVAMIGFMNGLVDSMIKNAIAWQTSH 56
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG-------- 120
+ + LV+ + D V + S + + G R
Sbjct: 57 LQIHQSAYLVNPELKDTIPDSQSIVTTLDKHQSVKGVSERFLADGMIASARSSRGIRING 116
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
I + D + +++ + A+ L + +G K+ + +
Sbjct: 117 IHLEQEQKITPLSEHIIDGYWLDEEGRNPILVSQKTAKRLKLRVGSKVILTLSDINGDVS 176
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA---- 236
G R K F+ +D+G VY+ + + + I + + D
Sbjct: 177 GAAFRVKGI-----FKTPSTIFDDGNVYVRKADLEKIAGIAG-AHEIAILLNANDDDVLQ 230
Query: 237 --IEKTHENIVRILGNGVVVIDWQQRYQIF 264
+ T I G + V W + +
Sbjct: 231 NIVSFTRTLIDDGSGKPLTVRTWLEIQPLL 260
>gi|62185142|ref|YP_219927.1| lipoprotein releasing system transmembrane protein [Chlamydophila
abortus S26/3]
gi|62148209|emb|CAH63966.1| lipoprotein releasing system transmembrane protein [Chlamydophila
abortus S26/3]
Length = 503
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/236 (11%), Positives = 68/236 (28%), Gaps = 12/236 (5%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ E+++A++YL RK +I S S + + IV +SV+ G +
Sbjct: 1 MKLELLIAFKYLIPRRKRLSSAIVSIFSIGIISLVTWLSIVFISVIYGLEQ--------R 52
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H + Q + + + + + + +
Sbjct: 53 WIHDLSQLHSPVKILPSSVYYDSYYYQIDRHADLSLYTTKTIGEKLASSLVDPYDPNVDY 112
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ D + ++ L +N + + I D T
Sbjct: 113 SLPENFPLPDKTADGKLKDPVKIAFEVLNPYLEQNHAQLLEFEEGIGYVQMDRTAHPNKS 172
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFN-LENAVSGIE---VFVKDPDA 236
S++++ + + + Y + N ++ G E + +++
Sbjct: 173 ESRTFSQFIAYPSDEVYKNRVLPYEQTDYSSEILNPFNSSDQGWEQDFIKLQNTYR 228
>gi|218962154|ref|YP_001741929.1| putative ABC-type transport systems, involved in lipoprotein
release, permease components [Candidatus Cloacamonas
acidaminovorans]
gi|167730811|emb|CAO81723.1| putative ABC-type transport systems, involved in lipoprotein
release, permease components [Candidatus Cloacamonas
acidaminovorans]
Length = 411
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/266 (16%), Positives = 93/266 (34%), Gaps = 26/266 (9%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDY-------- 80
S ++ IG+++GVM ++VV++++NG E + + G I+ + D+
Sbjct: 23 SIVTVIGIILGVMCIMVVLAIVNGMNESTMSWMEERGGLNKIEVEQNWFYDFSKGGDPSF 82
Query: 81 --QFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYG 138
+ I IP+ P V V +RG+ Q ++
Sbjct: 83 SLKEIRYLQSLIPEAEAFNPTVQEWEAVINKGDIRYSTSLRGVMPDFVKVEQWDIAKGRF 142
Query: 139 NVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMR 198
D D+ VI+ D + + G+ + +G+ ++ + ++
Sbjct: 143 IKDLDIDQHSNVIVLGSTVAKEFFGNNDPLGQIISVGNQQFIVVGVMAERFMPTQGGQIG 202
Query: 199 FP----DYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI---LGNG 251
+Y N ++ + N + +S I++ K P+ ++ + I L NG
Sbjct: 203 MGENALEYLNRRCFIPISTMISKVNPGSKISSIDIRAKSPEEAKELRRKVENIVLNLKNG 262
Query: 252 ---VVVIDWQQR------YQIFFSCY 268
V +++ F
Sbjct: 263 KHLFQVTSAKEQLDTMQANAKIFEAI 288
>gi|239832736|ref|ZP_04681065.1| Macrolide export ATP-binding/permease protein macB [Ochrobactrum
intermedium LMG 3301]
gi|239825003|gb|EEQ96571.1| Macrolide export ATP-binding/permease protein macB [Ochrobactrum
intermedium LMG 3301]
Length = 656
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/246 (13%), Positives = 77/246 (31%), Gaps = 8/246 (3%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A R L +N + ++ +G++IGV +++ ++++ G + ++ R+ + ++
Sbjct: 269 KMAMRALRAN------IFRTVLTLLGIIIGVSSVVTMLAIGTGAQNSILDRINAMGTDLI 322
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ + L + A + + +
Sbjct: 323 LVRPSMAGFRGTGSIATLVPEDATAILELPNIKTAVPEVTGTVTLRRGNVDYQSQANGTV 382
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKI--NILSPYGDVTPMGMGIRSK 187
V+ + + LG ++ + + + +P G +
Sbjct: 383 SAFSEAKSWKVATGDFISQSDMDNYAPVAVLGKTVVNTLFPDGSNPIGQYILIQKIPFQV 442
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
T+ + +V + L L + V I V VKD D I T E I +
Sbjct: 443 IGTLEPKGAGFGGADQDDVVIVPLSTGNLRLFGQKYVRTITVQVKDSDLINTTQEQIQDL 502
Query: 248 LGNGVV 253
L
Sbjct: 503 LDQRHK 508
>gi|170290856|ref|YP_001737672.1| peptide ABC transporter permease [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170174936|gb|ACB07989.1| ABC-type antimicrobial peptide transport system, permease component
[Candidatus Korarchaeum cryptofilum OPF8]
Length = 417
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/261 (12%), Positives = 90/261 (34%), Gaps = 14/261 (5%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +++ + S ++ ++++ +G+ +GV+ L V+S G+ I++++
Sbjct: 7 LKFSFKAMRSRKRRTYLTL------LGIFLGVLTLTAVVSYAAGY-GVAIQKIIKGGSLR 59
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
VI + ++ + V V+P + + + +V +
Sbjct: 60 VIYLIPREASFTESDLAKISTMDGVETVIPMIRIFGEFNVMGQNIRASIVG-FDVNYVEE 118
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
L YG+ ++ +I L++ D I + P+ G +
Sbjct: 119 LFPDLKLQYGDWPSNQAEQAVIIGNNILSQISVEDARDLIGLGIRISIGGPINKGSIKGT 178
Query: 189 YTVL-GMFRMRFPDYDNGMVYMS----LQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ + + + + + Q ++N + + + V V D + I++
Sbjct: 179 IYGVLAPYGTSIMTDVDNSILIPLDYAMSMYQRFYNRRDYPT-LVVIVDDVNRIDQVVSE 237
Query: 244 IVRILGNGVVVIDWQQRYQIF 264
+ G+ I + +
Sbjct: 238 LRDEYGDSAYPIAMRDLQRAL 258
>gi|167041979|gb|ABZ06716.1| putative Predicted permease [uncultured marine microorganism
HF4000_141E02]
Length = 266
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 43/107 (40%), Gaps = 4/107 (3%)
Query: 166 DKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVS 225
D+ + P ++ S+ + + + YD+ V M L +A L NAV+
Sbjct: 9 DRAQLTVPSMNLQGKISFPDSQYFRIKEVVEFGLQRYDSSQVVMHLVDASSLLGLGNAVN 68
Query: 226 GIEVFVKDPDAIEKTHENIVRILGN----GVVVIDWQQRYQIFFSCY 268
GI V + + ++ + I L N + + DW ++ Q F
Sbjct: 69 GISVELSNVYQVKSMVKEIESSLKNIKGLEITITDWSKQNQALFDAI 115
>gi|216264285|ref|ZP_03436277.1| lipoprotein releasing factor [Borrelia burgdorferi 156a]
gi|215980758|gb|EEC21565.1| lipoprotein releasing factor [Borrelia burgdorferi 156a]
Length = 417
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/260 (15%), Positives = 94/260 (36%), Gaps = 8/260 (3%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+ R + + + ++I +S + +G + +I+ +S+MNGF+ D +V
Sbjct: 6 FLLKRLILEEKNSLALTIVIILS---IALGEIIIILTISIMNGFQNDF----FLSITNVE 58
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
Q ++ I + + Q + + + + D
Sbjct: 59 SGNLKIENELTQEEIKKIKKIEGIKHINKIYETQGIGIQNYYYPTILNIIAVDIKDLKKD 118
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
QN S + +IIG L+ N + D + ++ T + + KS+
Sbjct: 119 QNFISFTGLEKDELDLKDNEIIIGNVLSHNFNLFENDPLELIITDEIKTLISLENDIKSF 178
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
+ +F+ + + +++M++ L N+ +V K+ + K E I + +
Sbjct: 179 KIKSIFKSNYAKINETLIFMNIDYFIKNKILHNSGINYQVKTKNLNPSNKLIEKI-KAVN 237
Query: 250 NGVVVIDWQQRYQIFFSCYE 269
+ W + + F+ +
Sbjct: 238 PKIKAKTWNEYNKEFYKILK 257
>gi|156976628|ref|YP_001447534.1| hypothetical protein VIBHAR_05402 [Vibrio harveyi ATCC BAA-1116]
gi|156528222|gb|ABU73307.1| hypothetical protein VIBHAR_05402 [Vibrio harveyi ATCC BAA-1116]
Length = 411
Score = 51.3 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 41/276 (14%), Positives = 91/276 (32%), Gaps = 28/276 (10%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+AWR L+ N+ + I ++ G+M ++ +M MNG + MIK +
Sbjct: 4 KLAWRNLWRNKLR------TSIMLGAMVFGLMGVVAMMGFMNGLVDSMIKNAISWQTSHF 57
Query: 70 IQQKYYPLVDYQFIANRLDFI--------PDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
Q+ LV+ + D +K + + + G+ + G+
Sbjct: 58 QIQQKSYLVNPELKDVIPDANKISKVLSANREVKAISERFLADGMIASARSTRGIRINGV 117
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ + + +++ +A L + +G K+ + + G
Sbjct: 118 NIEQEQNITPLSKHIVDGEWLSEEGRNPILVSSKIAERLKLRVGSKVVLTLSDVNGEVAG 177
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
R + F+ +D+G VY + + L I + + + E
Sbjct: 178 AAFRVRGI-----FKTPSTGFDDGNVYSRKADLEKVAGLSGT-HEIAILLTSNNDAE-LK 230
Query: 242 ENIV---RILGNG----VVVIDWQQRYQIFFSCYES 270
+ + IL + V WQ+ + + +
Sbjct: 231 QLLAFTHSILPPESKDLLSVRPWQEIQPLLSTMMST 266
>gi|330880889|gb|EGH15038.1| macrolide efflux ABC transporter ATP-binding/permease protein
[Pseudomonas syringae pv. glycinea str. race 4]
Length = 657
Score = 51.3 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/243 (15%), Positives = 89/243 (36%), Gaps = 18/243 (7%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +++
Sbjct: 273 AWRVMWINR------FRTALTLLGIVIGVASVVVMLAVGEGSKRQVMAQMSSFGSNIIYL 326
Query: 72 QKYYPLVDYQFIANRLD------FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
P LD +P+V ++P GQA V + S + ++
Sbjct: 327 NGKAPNPRAPKGIITLDEVAALGELPEVKMIMPVNGGQAGVRYGNVDHSSYVGGNDTHFP 386
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ Y + +++ +IG + + L D I +V +G+
Sbjct: 387 AIFNWPVVEGSYFSEADEQSAAAVAVIGYKVRQKLFGEHTDPIGQYILIENVPFQVVGVL 446
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ G + F ++ I + +D + ++ E I
Sbjct: 447 EEKGATSGDLDSDNRIAIPYSA-----ASIRLFGSQDPE-YITIATRDANNVKHAEEAIR 500
Query: 246 RIL 248
+L
Sbjct: 501 NLL 503
>gi|319954552|ref|YP_004165819.1| hypothetical protein Celal_3046 [Cellulophaga algicola DSM 14237]
gi|319423212|gb|ADV50321.1| protein of unknown function DUF214 [Cellulophaga algicola DSM
14237]
Length = 420
Score = 51.3 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/281 (11%), Positives = 77/281 (27%), Gaps = 30/281 (10%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
+ +A +L + K+ + + +GV G+ A I ++S M G + +L
Sbjct: 5 PVILNIAKTHLLTKLKS------TLTAALGVTFGIGAYITLVSFMTGLNTMLDDLILNQT 58
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
HV + + P + L
Sbjct: 59 PHVHLYNEVKPTEKQPVARFDEIQQSFQFIHSVKPKQNQKKIHNALPILQYLKEDKKVKG 118
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIG-------------------- 165
+ + + GV I +++ +
Sbjct: 119 ATPQARAQIFYISGAIELGGNLIGVDIMQEVKLSNIRDYIAQGTPEDLKNSDTGILLGAG 178
Query: 166 -DKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFN-LENA 223
K L V + ++G+++ D DN +++L+ Q +N
Sbjct: 179 LAKKMSLKIGDRVQVSTIKGDLFPLKIVGIYQSGLADVDNSQSFVNLKTVQRILGETQNY 238
Query: 224 VSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIF 264
V+ I V + + + + + + + + + F
Sbjct: 239 VTDINVKLNEINDAPEYSKKLASLFS--ITATSINEANAQF 277
>gi|71737349|ref|YP_274163.1| macrolide efflux ABC transporter ATP-binding/permease [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|122064327|sp|Q48KB2|MACB_PSE14 RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|71557902|gb|AAZ37113.1| macrolide efflux ABC transporter, ATP-binding/permease protein
[Pseudomonas syringae pv. phaseolicola 1448A]
gi|320324858|gb|EFW80930.1| macrolide efflux ABC transporter, ATP-binding/permease protein
[Pseudomonas syringae pv. glycinea str. B076]
gi|320329223|gb|EFW85220.1| macrolide efflux ABC transporter, ATP-binding/permease protein
[Pseudomonas syringae pv. glycinea str. race 4]
Length = 656
Score = 51.3 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/243 (15%), Positives = 89/243 (36%), Gaps = 18/243 (7%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +++
Sbjct: 272 AWRVMWINR------FRTALTLLGIVIGVASVVVMLAVGEGSKRQVMAQMSSFGSNIIYL 325
Query: 72 QKYYPLVDYQFIANRLD------FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
P LD +P+V ++P GQA V + S + ++
Sbjct: 326 NGKAPNPRAPKGIITLDEVAALGELPEVKMIMPVNGGQAGVRYGNVDHSSYVGGNDTHFP 385
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ Y + +++ +IG + + L D I +V +G+
Sbjct: 386 AIFNWPVVEGSYFSEADEQSAAAVAVIGYKVRQKLFGEHTDPIGQYILIENVPFQVVGVL 445
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ G + F ++ I + +D + ++ E I
Sbjct: 446 EEKGATSGDLDSDNRIAIPYSA-----ASIRLFGSQDPE-YITIATRDANNVKHAEEAIR 499
Query: 246 RIL 248
+L
Sbjct: 500 NLL 502
>gi|257094497|ref|YP_003168138.1| hypothetical protein CAP2UW1_2931 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257047021|gb|ACV36209.1| protein of unknown function DUF214 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 403
Score = 51.3 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/269 (13%), Positives = 94/269 (34%), Gaps = 24/269 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING-H 67
+ +A R + ++ + ++ ++ G++ LI+ +N + + ++ H
Sbjct: 2 LKLALRNILRHKVR------TAMTLAVIVFGIVGLILSGGFVNDMLFQLAESIIRSQSGH 55
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVL---------PFVSGQAFVSGLSSGGSGVLV 118
+ + + Y + L PD ++ + + ++
Sbjct: 56 LQVLRVGYFAKGGRSPDQYLIDHPDELRESVAKLPLVDDVMLRMSFSGLLNNGRSDWPII 115
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
D + + G+++G+ +AR L + GD +L +
Sbjct: 116 GEGVEPDREARLGTQLQIIAGRQLSPTDPYGILLGEGVARTLKLKPGDTATVLLNAAEG- 174
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+ ++ + V+G+F+ D+D V + L AQ + + V +K E
Sbjct: 175 ----ALNTQEFNVVGVFQSFSKDFDARAVRIPLSAAQELVGSP-RANSVVVSLKVTADTE 229
Query: 239 KTHENIVRIL-GNGVVVIDWQQRYQIFFS 266
+ ++ L + + W++ F+S
Sbjct: 230 RIAASLRNRLASQDLEIRTWEELN-DFYS 257
>gi|86357695|ref|YP_469587.1| putative ABC transporter, permease protein [Rhizobium etli CFN 42]
gi|86281797|gb|ABC90860.1| putative ABC transporter, permease protein [Rhizobium etli CFN 42]
Length = 400
Score = 51.3 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/255 (14%), Positives = 89/255 (34%), Gaps = 11/255 (4%)
Query: 3 IFSRFE-VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+F FE + +A R + N +F ++ +GV+IGV A+I ++++ NG + +
Sbjct: 1 MF--FETLKLALRAISRNMLRSF------LTVLGVVIGVAAVIALVTIGNGTTAQVSTEL 52
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ +++ + + + DV + + G V+ L+ + V+ G
Sbjct: 53 SRLGTNMLFVRPGQFGPGRASSEAKRFSVKDVAAIRDQIGGLRAVAPLNQSTATVIFGGQ 112
Query: 122 SNSDFSY--LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
++S + F N++ G+ P G
Sbjct: 113 NHSTSVSGTTNDYFVAQDWNLALGRIFTPAEERGQSRCIIGETVRSQLFGAADPLGQQIR 172
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+G + + + +V M ++ Q + + V I + +D + K
Sbjct: 173 VGKVSCPVIGVLAKRGQSGMGTDQDDVVIMPVKVFQRRISGNSNVPQIIISARDGVSTAK 232
Query: 240 THENIVRILGNGVVV 254
++ +L +
Sbjct: 233 VQADVENLLRERRKI 247
>gi|319943425|ref|ZP_08017707.1| macrolide efflux ABC superfamily ATP binding cassette transporter,
ATP-binding/permease protein [Lautropia mirabilis ATCC
51599]
gi|319743240|gb|EFV95645.1| macrolide efflux ABC superfamily ATP binding cassette transporter,
ATP-binding/permease protein [Lautropia mirabilis ATCC
51599]
Length = 726
Score = 51.3 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/243 (14%), Positives = 81/243 (33%), Gaps = 17/243 (6%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AWR + NR + ++ +G++IGV ++IV+++V G +E ++ + +
Sbjct: 342 AWRVMRLNRLR------TGLTLLGIIIGVASVIVMLAVGQGSQEKVLAEMQTFGLRTIYI 395
Query: 72 QKYYPLVDYQFIA------NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+ + Q + +P+V + P + + + + +
Sbjct: 396 FREWLSDTQQARPLSMADVAAVQQVPNVEQASPVIDQNGIIVRHGNRTLRTNLSATTRHF 455
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
L S+ + D + V++ + R + +G
Sbjct: 456 AQALNWPVSQGTLLETEDEHDLRKVVLLGERVREALFGAHGQAVG-----QEILVGNVPF 510
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ D N V + + A + +S I V ++D +T IV
Sbjct: 511 RVIGVMAPKPAPFPEDDVNNQVIVPVGAAAVRLVGSMELSRINVVIRDMRHAAETEAAIV 570
Query: 246 RIL 248
+ L
Sbjct: 571 KTL 573
>gi|91772157|ref|YP_564849.1| hypothetical protein Mbur_0078 [Methanococcoides burtonii DSM 6242]
gi|91711172|gb|ABE51099.1| protein of unknown function DUF214 [Methanococcoides burtonii DSM
6242]
Length = 404
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/228 (13%), Positives = 73/228 (32%), Gaps = 3/228 (1%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ A++ +S+ F + + + + ++ + Y +
Sbjct: 22 SALTTLGIIIGIAAVVANVSLGASFNQFFVDELGSQGSNFIVIYNEDINLFYDNQLEAIR 81
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
P V V P + Q S + ++G S D
Sbjct: 82 NTPKVEGVSP-IRQQLAGVTYISTIRQIDIQGSSADYEKIGNIQLEAGNFFSDQDKYAAV 140
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTP-MGMGIRSKSYTVLGMFRMRFPDYDNGMV 207
+ IS + I+I D TP ++ + +
Sbjct: 141 LGSDVAYEKFDQKISYRNSIDIEFIRRDGTPVEHSFKVIGIIDSPDTTFIQTGAESDVRI 200
Query: 208 YMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVI 255
++ + +E+ G + V+D +++ + I + + + V
Sbjct: 201 FIPINTMNEMLGIED-YGGFSITVEDAESVRPVSDEIDKKIARSLGVS 247
>gi|331010694|gb|EGH90750.1| macrolide efflux ABC transporter ATP-binding/permease protein
[Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 656
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/243 (15%), Positives = 89/243 (36%), Gaps = 18/243 (7%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +++
Sbjct: 272 AWRVMWINR------FRTALTLLGIVIGVASVVVMLAVGEGSKRQVMAQMSSFGSNIIYL 325
Query: 72 QKYYPLVDYQFIANRLD------FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
P L+ +P+V ++P GQA V + S + ++
Sbjct: 326 NGKAPNPRAPKGIITLEEVAALGELPEVKMIMPVNGGQAGVRYGNVDHSSYVGGNDTHFP 385
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ Y + +++ +IG + + L D I +V +G+
Sbjct: 386 AIFNWPVVEGSYFSEADEQSAAAVAVIGYKVRQKLFGEHTDPIGQYILIENVPFQVVGVL 445
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ G + F ++ I + +D + ++ E I
Sbjct: 446 EEKGATSGDLDSDNRIAIPYSA-----ASIRLFGSQDPE-YITIATRDANNVKHAEEAIR 499
Query: 246 RIL 248
+L
Sbjct: 500 NLL 502
>gi|330987404|gb|EGH85507.1| macrolide efflux ABC transporter ATP-binding/permease protein
[Pseudomonas syringae pv. lachrymans str. M301315]
Length = 656
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/243 (15%), Positives = 89/243 (36%), Gaps = 18/243 (7%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +++
Sbjct: 272 AWRVMWINR------FRTALTLLGIVIGVASVVVMLAVGEGSKRQVMAQMSSFGSNIIYL 325
Query: 72 QKYYPLVDYQFIANRLD------FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
P L+ +P+V ++P GQA V + S + ++
Sbjct: 326 NGKAPNPRAPKGIITLEEVAALGELPEVKMIMPVNGGQAGVRYGNVDHSSYVGGNDTHFP 385
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ Y + +++ +IG + + L D I +V +G+
Sbjct: 386 AIFNWPVVEGSYFSEADEQSAAAVAVIGYKVRQKLFGEHTDPIGQYILIENVPFQVVGVL 445
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ G + F ++ I + +D + ++ E I
Sbjct: 446 EEKGATSGDLDSDNRIAIPYSA-----ASIRLFGSQDPE-YITIATRDANNVKHAEEAIR 499
Query: 246 RIL 248
+L
Sbjct: 500 NLL 502
>gi|330869814|gb|EGH04523.1| macrolide efflux ABC transporter ATP-binding/permease protein
[Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 656
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/243 (15%), Positives = 89/243 (36%), Gaps = 18/243 (7%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +++
Sbjct: 272 AWRVMWINR------FRTALTLLGIVIGVASVVVMLAVGEGSKRQVMAQMSSFGSNIIYL 325
Query: 72 QKYYPLVDYQFIANRLD------FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
P L+ +P+V ++P GQA V + S + ++
Sbjct: 326 NGKAPNPRAPKGIITLEEVAALGELPEVKMIMPVNGGQAGVRYGNVDHSSYVGGNDTHFP 385
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ Y + +++ +IG + + L D I +V +G+
Sbjct: 386 AIFNWPVVEGSYFSEADEQSAAAVAVIGYKVRQKLFGEHTDPIGQYILIENVPFQVVGVL 445
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ G + F ++ I + +D + ++ E I
Sbjct: 446 EEKGATSGDLDSDNRIAIPYSA-----ASIRLFGSQDPE-YITIATRDANNVKHAEEAIR 499
Query: 246 RIL 248
+L
Sbjct: 500 NLL 502
>gi|298486479|ref|ZP_07004539.1| pyoverdine efflux carrier and ATP binding protein [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|298158956|gb|EFI00017.1| pyoverdine efflux carrier and ATP binding protein [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
Length = 656
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/243 (15%), Positives = 89/243 (36%), Gaps = 18/243 (7%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +++
Sbjct: 272 AWRVMWINR------FRTALTLLGIVIGVASVVVMLAVGEGSKRQVMAQMSSFGSNIIYL 325
Query: 72 QKYYPLVDYQFIANRLD------FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
P L+ +P+V ++P GQA V + S + ++
Sbjct: 326 NGKAPNPRAPKGIITLEEVAALGELPEVKMIMPVNGGQAGVRYGNVDHSSYVGGNDTHFP 385
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ Y + +++ +IG + + L D I +V +G+
Sbjct: 386 AIFNWPVVEGSYFSEADEQSAAAVAVIGYKVRQKLFGEHTDPIGQYILIENVPFQVVGVL 445
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ G + F ++ I + +D + ++ E I
Sbjct: 446 EEKGATSGDLDSDNRIAIPYSA-----ASIRLFGSQDPE-YITIATRDANNVKHAEEAIR 499
Query: 246 RIL 248
+L
Sbjct: 500 NLL 502
>gi|289629053|ref|ZP_06462007.1| macrolide efflux ABC transporter, ATP-binding/permease protein
[Pseudomonas syringae pv. aesculi str. NCPPB3681]
Length = 390
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/243 (15%), Positives = 89/243 (36%), Gaps = 18/243 (7%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +++
Sbjct: 6 AWRVMWINR------FRTALTLLGIVIGVASVVVMLAVGEGSKRQVMAQMSSFGSNIIYL 59
Query: 72 QKYYPLVDYQFIANRLD------FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
P L+ +P+V ++P GQA V + S + ++
Sbjct: 60 NGKAPNPRAPKGIITLEEVAALGELPEVKMIMPVNGGQAGVRYGNVDHSSYVGGNDTHFP 119
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ Y + +++ +IG + + L D I +V +G+
Sbjct: 120 AIFNWPVVEGSYFSEADEQSAAAVAVIGYKVRQKLFGEHTDPIGQYILIENVPFQVVGVL 179
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ G + F ++ I + +D + ++ E I
Sbjct: 180 EEKGATSGDLDSDNRIAIPYSA-----ASIRLFGSQDPE-YITIATRDANNVKHAEEAIR 233
Query: 246 RIL 248
+L
Sbjct: 234 NLL 236
>gi|268325508|emb|CBH39096.1| putative permease, FtsX family [uncultured archaeon]
Length = 395
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+++A+R + + + ++ +G+ +G+ A+I +MSV GF + + +++ +
Sbjct: 5 LLLAYRNIKERKAR------TSLTLLGIAVGIAAVIALMSVGYGFEQSVTGQLVEM 54
>gi|119952881|ref|YP_945090.1| cell division protein FtsX [Borrelia turicatae 91E135]
gi|119861652|gb|AAX17420.1| cell division protein FtsX [Borrelia turicatae 91E135]
Length = 415
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/242 (13%), Positives = 87/242 (35%), Gaps = 5/242 (2%)
Query: 28 ASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRL 87
+ + + +++G + +I+ +S+MNGF+ D + + N L
Sbjct: 21 LTIVIILSIVLGQIIIIITISIMNGFQNDFFTSIS----TLESGNLKIESQLNDQELNAL 76
Query: 88 DFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRG 147
I ++I++ Q S + + + D +N S
Sbjct: 77 KEIKEIIQINKIYETQGIGIENYYYPSILNIIALDTKDIIEDKNFILLTGLTQSELQLND 136
Query: 148 KGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMV 207
+IIG L+ NLG+ GD I ++ + K + + +F+ + + +
Sbjct: 137 DEIIIGDVLSYNLGLLEGDIIGLILSDEIKNLQTLKNEIKYFKIKAIFKSNYAKINESTI 196
Query: 208 YMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSC 267
+M++ ++++ ++ ++ + I + + + W + + F+
Sbjct: 197 FMNINYFYKKQIIKDSDIKYQIKTQNLYPSKSLINKI-KNINPNIQFKPWNEYNKEFYKA 255
Query: 268 YE 269
+
Sbjct: 256 LK 257
>gi|91772158|ref|YP_564850.1| cell division protein FtsX [Methanococcoides burtonii DSM 6242]
gi|91711173|gb|ABE51100.1| protein of unknown function DUF214 [Methanococcoides burtonii DSM
6242]
Length = 404
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/245 (13%), Positives = 72/245 (29%), Gaps = 7/245 (2%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A + S + S ++ +G++IGV A+IV +S+ GF ++ + + + +
Sbjct: 9 KIALGSIRSAKIR------SALTTLGIIIGVAAVIVNISLGVGFSQNFEDDIGAVGSNFI 62
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ V + V V P ++ SS S + S +
Sbjct: 63 VVFTQKNNVFTDNQLEVVRNTQGVEAVSPVNGQIGTLTYQSSSRSATINGVSSEYEEVGN 122
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
+ + F G I D ++
Sbjct: 123 IVMEKGQFLTDQDQFVAVIGSDIAYDKFERNLSVKNSINISINNIEGGVSTRKFTVKGIV 182
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
+ V++ L Q + + + G + + + +E + + L
Sbjct: 183 QDPDATFISPEVDPRVRVFIPLGVMQEMQGVSD-IGGFFIKAESLEVLESVTDEVDENLA 241
Query: 250 NGVVV 254
V V
Sbjct: 242 RSVGV 246
>gi|255310951|ref|ZP_05353521.1| hypothetical protein Ctra62_00780 [Chlamydia trachomatis 6276]
gi|255317252|ref|ZP_05358498.1| hypothetical protein Ctra6_00775 [Chlamydia trachomatis 6276s]
gi|296435667|gb|ADH17841.1| hypothetical protein G9768_00780 [Chlamydia trachomatis G/9768]
gi|296437527|gb|ADH19688.1| hypothetical protein G11074_00780 [Chlamydia trachomatis G/11074]
gi|297140026|gb|ADH96784.1| hypothetical protein CTG9301_00780 [Chlamydia trachomatis G/9301]
Length = 503
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/235 (12%), Positives = 69/235 (29%), Gaps = 10/235 (4%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ E+++A++YL RK SI S S V + + +V MSV++G ++ +
Sbjct: 1 MKLELLLAFKYLIPKRKRLSSSIVSAFSIGIVALVIWLSVVFMSVIHGLQQ------RWV 54
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ ++ + I + ++ L +
Sbjct: 55 GDLASLHSSIRIEPSDKYYESYYYQIDSHAEASQYIYKTIGEKLLC--EQTDPYDPDVDF 112
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
D R + + G + + + + D G
Sbjct: 113 LLPEAFPDPEFSDNGEMIDPVRTANERMLSLFSSRKGSFVEFEEGMGHVHMDRAFRGHKG 172
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
++ + + + + + N NA S E ++ D +++
Sbjct: 173 EPRALSQYIAYSSDILYQQRMLPFEETDYSTEVLNRFNASS--EGWLADFLVLQE 225
>gi|330951641|gb|EGH51901.1| ABC transporter [Pseudomonas syringae Cit 7]
Length = 593
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/245 (14%), Positives = 90/245 (36%), Gaps = 18/245 (7%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +++
Sbjct: 273 AWRVMWINR------FRTALTLLGIVIGVASVVVMLAVGEGSKRQVMAQMSSFGSNIIYL 326
Query: 72 QKYYPLVDYQFIANRLD------FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
P L+ +P+V ++P GQA V + S + ++
Sbjct: 327 NGKAPNPRAPKGVITLEEVAALGQLPEVKMIMPVNGGQAGVRYGNVDHSSYVGGNDTHFP 386
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ Y + +++ + +IG + + L D + +V +G+
Sbjct: 387 AIFNWPVVEGSYFSEADEQNAAAVAVIGYKVRQKLFGEHSDPVGQYILIENVPFQVVGVL 446
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ G + F ++ I + +D + +++ I
Sbjct: 447 QEKGATSGDLDSDNRIAIP-----YSSASIRLFGTQDPE-YITIATRDANNVKQAETAIR 500
Query: 246 RILGN 250
+L
Sbjct: 501 ELLQQ 505
>gi|330899132|gb|EGH30551.1| ABC transporter [Pseudomonas syringae pv. japonica str. M301072PT]
Length = 656
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/245 (14%), Positives = 92/245 (37%), Gaps = 18/245 (7%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +++
Sbjct: 272 AWRVMWINR------FRTALTLLGIVIGVASVVVMLAVGEGSKRQVMAQMSSFGSNIIYL 325
Query: 72 QKYYPLVDYQFIANRLD------FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
P L+ +P+V ++P GQA V + S + ++
Sbjct: 326 NGKAPNPRAPKGVITLEEVAALGELPEVKMIMPVNGGQAGVRYGNVDHSSYVGGNDTHFP 385
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ Y + +++ + +IG + + L D + +V +G+
Sbjct: 386 AIFNWPVVEGSYFSEADEQNAAAVAVIGHKVRQKLFDEQTDPVGQYILIENVPFQVVGVL 445
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ G + F ++ I + +D + +++ ++I
Sbjct: 446 QEKGATSGDLDSDNRIAIP-----YSSASIRLFGTQDPE-YITIATRDANNVKQAEQSIR 499
Query: 246 RILGN 250
+L
Sbjct: 500 DLLQQ 504
>gi|261415983|ref|YP_003249666.1| protein of unknown function DUF214 [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|261372439|gb|ACX75184.1| protein of unknown function DUF214 [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 401
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 4 FSRFEV-IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ F + +A R L NR F +S +G++IGV A+I ++++ G ++ + +++
Sbjct: 1 MNPFTLAKIALRALLRNRMRTF------LSVLGIVIGVAAVITMVAMGEGSKKSIKEQMT 54
Query: 63 GINGHVVIQQKYY 75
+ + +
Sbjct: 55 AMGTNAITIMPNQ 67
>gi|291533546|emb|CBL06659.1| ABC-type antimicrobial peptide transport system, permease component
[Megamonas hypermegale ART12/1]
Length = 405
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/259 (13%), Positives = 85/259 (32%), Gaps = 12/259 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + V +A L++N+ S ++ +G++IGV A+I ++S+ G R+ + +
Sbjct: 1 MLFKETVQMAISALWANKMR------SLLTMLGIIIGVGAVIAMVSIGMGVRKQVEDSIA 54
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ +++I + + + + G+
Sbjct: 55 SLGSNMLIINASATKNATGVRQAAGSNVRLKLDDAEAIKRNKRCRICFATGTKNYQIVSG 114
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
N +++ Y + + I KD+ +++ + +G+ P+G
Sbjct: 115 NQNWNTQVVGVIPDYMYIRSLSIANGTFITEKDVETRARVAVIGTTVASNLFGEENPVGK 174
Query: 183 GIRSKSYTVLG------MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
IR + + + +V + L + V I V V D
Sbjct: 175 NIRINNDPFKVVGILESKGQSSVGQDQDDIVIVPLTTVMTRIMAIDYVQQISVQVTSADK 234
Query: 237 IEKTHENIVRILGNGVVVI 255
++ I ++ +
Sbjct: 235 MDSVQAEIENLMRQRHKIT 253
>gi|218778449|ref|YP_002429767.1| hypothetical protein Dalk_0594 [Desulfatibacillum alkenivorans
AK-01]
gi|218759833|gb|ACL02299.1| protein of unknown function DUF214 [Desulfatibacillum alkenivorans
AK-01]
Length = 410
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 45/271 (16%), Positives = 97/271 (35%), Gaps = 28/271 (10%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F++ AWR L+ N + + I + + +GV ++I + G M+ +
Sbjct: 1 MFAQL----AWRNLWRNPRR------TAIILLAIFMGVFSMIFFAAFSRGMANGMVNNAI 50
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLS---------SGG 113
+ Q D D + K+LP + + +
Sbjct: 51 DNLVGHIKIQHPDYRSDPDISHRIEDPRSVMDKILPVLPEGSKIVQRIRVEGVAANARET 110
Query: 114 SGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSP 173
+G+ + GI S + + G+++G LA +G K+ + +
Sbjct: 111 AGIEIAGIEPSKEKGVSFIGDAPIEGEMLEDGDKNGILLGAALADRFDTEVGKKLVLTTQ 170
Query: 174 YGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFV-- 231
D +S+++ + G++ + V+++L A++ +N + I +
Sbjct: 171 RADG-----ETQSRAFRIRGLYHAEIEATEKAYVFITLDAAKILVGDKNGATEIAATLPG 225
Query: 232 KDPDAI-EKTHENIVRILGN-GVVVIDWQQR 260
K D I E+T L + V DW ++
Sbjct: 226 KKVDRILEQTVSKCKEALKPLNLSVFDWMEQ 256
>gi|330974319|gb|EGH74385.1| ABC transporter [Pseudomonas syringae pv. aceris str. M302273PT]
Length = 606
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/245 (14%), Positives = 92/245 (37%), Gaps = 18/245 (7%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +++
Sbjct: 222 AWRVMWINR------FRTALTLLGIVIGVASVVVMLAVGEGSKRQVMAQMSSFGSNIIYL 275
Query: 72 QKYYPLVDYQFIANRLD------FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
P L+ +P+V ++P GQA V + S + ++
Sbjct: 276 NGKAPNPRAPKGVITLEEVAALGELPEVKMIMPVNGGQAGVRYGNLDHSSYVGGNDTHFP 335
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ Y + +++ + +IG + + L D + +V +G+
Sbjct: 336 AIFNWPVVEGSYFSEADEQNAAAVAVIGYKVRQKLFGEQSDPVGQYILIENVPFQVVGVL 395
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ G + F ++ I + +D + +++ ++I
Sbjct: 396 QEKGATSGDLDSDNRIAIP-----YSSASIRLFGTQDPE-YITIATRDANNVKQAEQSIR 449
Query: 246 RILGN 250
+L
Sbjct: 450 NLLQQ 454
>gi|241204619|ref|YP_002975715.1| hypothetical protein Rleg_1894 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240858509|gb|ACS56176.1| protein of unknown function DUF214 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 400
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/255 (14%), Positives = 91/255 (35%), Gaps = 11/255 (4%)
Query: 3 IFSRFE-VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+F FE + +A R + N +F ++ +GV+IGV A+I ++++ NG + +
Sbjct: 1 MF--FETLKLALRAISRNMLRSF------LTVLGVVIGVAAVIALVTIGNGTTAQVSTEL 52
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ +++ + + + DV + + G V+ L+ + V+ G
Sbjct: 53 SRLGTNMLFVRPGQFGPGRASSEAKRFSVKDVAAIRDQIGGLRAVAPLNQSTATVIFGGQ 112
Query: 122 SNSDFSY--LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
++S + F N++ + G+ P G
Sbjct: 113 NHSTSVSGTTNDYFIAQDWNLALGRNFLPAEERGQARCIIGETVRSQLFGSADPTGQQIR 172
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+G + + + + +V M ++ Q + + V I + +D + K
Sbjct: 173 VGKVSCPVIGVLAKRGQSGMGNDQDDVVIMPVKVFQRRISGSSNVPQIIISARDGVSTAK 232
Query: 240 THENIVRILGNGVVV 254
++ +L +
Sbjct: 233 VQSDVENLLRERRKI 247
>gi|116252118|ref|YP_767956.1| hypothetical protein RL2366 [Rhizobium leguminosarum bv. viciae
3841]
gi|115256766|emb|CAK07856.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 400
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/255 (14%), Positives = 91/255 (35%), Gaps = 11/255 (4%)
Query: 3 IFSRFE-VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+F FE + +A R + N +F ++ +GV+IGV A+I ++++ NG + +
Sbjct: 1 MF--FETLKLALRAISRNMLRSF------LTVLGVVIGVAAVIALVTIGNGTTAQVSTEL 52
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ +++ + + + DV + + G V+ L+ + V+ G
Sbjct: 53 SRLGTNMLFVRPGQFGPGRASSEAKRFSVKDVAAIRDQIGGLRAVAPLNQSTATVIFGGQ 112
Query: 122 SNSDFSY--LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
++S + F N++ + G+ P G
Sbjct: 113 NHSTSVSGTTNDYFIAQDWNLALGRNFLPAEERGQARCIIGETVRSQLFGSADPTGQQIR 172
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+G + + + + +V M ++ Q + + V I + +D + K
Sbjct: 173 VGKVSCPVIGVLAKRGQSGMGNDQDDVVIMPVKVFQRRISGSSNVPQIIISARDGVSTAK 232
Query: 240 THENIVRILGNGVVV 254
++ +L +
Sbjct: 233 VQSDVENLLRERRKI 247
>gi|66045209|ref|YP_235050.1| ABC transporter [Pseudomonas syringae pv. syringae B728a]
gi|81308343|sp|Q4ZV10|MACB1_PSEU2 RecName: Full=Macrolide export ATP-binding/permease protein MacB 1
gi|63255916|gb|AAY37012.1| ABC transporter:Protein of unknown function DUF214 [Pseudomonas
syringae pv. syringae B728a]
Length = 657
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/245 (14%), Positives = 92/245 (37%), Gaps = 18/245 (7%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +++
Sbjct: 273 AWRVMWINR------FRTALTLLGIVIGVASVVVMLAVGEGSKRQVMAQMSSFGSNIIYL 326
Query: 72 QKYYPLVDYQFIANRLD------FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
P L+ +P+V ++P GQA V + S + ++
Sbjct: 327 NGKAPNPRAPKGVITLEEVAALGELPEVKMIMPVNGGQAGVRYGNLDHSSYVGGNDTHFP 386
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ Y + +++ + +IG + + L D + +V +G+
Sbjct: 387 AIFNWPVVEGSYFSEADEQNAAAVAVIGYKVRQKLFGEQSDPVGQYILIENVPFQVVGVL 446
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ G + F ++ I + +D + +++ ++I
Sbjct: 447 QEKGATSGDLDSDNRIAIP-----YSSASIRLFGTQDPE-YITIATRDANNVKQAEQSIR 500
Query: 246 RILGN 250
+L
Sbjct: 501 NLLQQ 505
>gi|304436976|ref|ZP_07396939.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304369927|gb|EFM23589.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 404
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/245 (14%), Positives = 78/245 (31%), Gaps = 11/245 (4%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
L +N+ S ++ +G++IGV A+I ++S+ G R + + +++I
Sbjct: 14 LLANKLR------SLLTMLGIIIGVGAVIAMVSIGMGVRTSVSDSFASLGSNMLIVMPGS 67
Query: 76 PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSR 135
S + +S S N +++ +
Sbjct: 68 SNQGGVRGKAGTRKSLKYDDAKAIRSKIKGIDYVSPTVSSSYQVVNGNLNWNTQVEGVTP 127
Query: 136 FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMF 195
+ + I D+ + I++ + +G P+G IR + +
Sbjct: 128 ELMQIRSLKVENGTFITTSDMQKRSRIAVIGPTVASNLFGTENPVGKNIRINNQPFKVIG 187
Query: 196 RMRFPDYDNGM-----VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN 250
G +Y+ L AQ V I + V P+ +++ I +L
Sbjct: 188 ITASKGQSIGQDQDDVIYIPLTTAQERMLAITHVHSINIQVSSPEKMDEVQAEIETLLRQ 247
Query: 251 GVVVI 255
+
Sbjct: 248 RHHIR 252
>gi|269963993|ref|ZP_06178300.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269831277|gb|EEZ85429.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 422
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/284 (15%), Positives = 86/284 (30%), Gaps = 28/284 (9%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M V +AW L NR+ S +S + + I V AL + + +
Sbjct: 1 MGKLIPVSVRLAWLNLQRNRRR------SLLSMLIIAIAVFALTSAGGFGLYTYDSLKES 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIA-----------NRLDFIPDVIKVLPFVSGQAFVSGL 109
GH+ + Y + + +L + +V V P V +S
Sbjct: 55 TARDTGHLTLTTPGYFAKEEEMPLSNGLTHADDITKQLIGLNEVRGVQPRVEFSGLISNG 114
Query: 110 SSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN 169
+ + + R +SN + + +
Sbjct: 115 NKSSIFIGIGVNEREFDMKGPFLDVREGQTLSNIHASRYDPAEPEVMLGVDLANNLSVHV 174
Query: 170 ILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV 229
T + + + V G++ P+ D +Y+ + AQ + VS + V
Sbjct: 175 GDWITLLATTTDGALNAYDFKVRGIYSTGVPELDKRQLYVHINSAQSLLG-SDKVSALSV 233
Query: 230 FVKDPDAIEKTHENIVRILG--------NGVVVIDWQQRYQIFF 265
F+ D + + + +L + + WQ+R FF
Sbjct: 234 FLFDTSLTSQVEQQVASVLSKQKQNFGDQDIEITPWQER--AFF 275
>gi|121534069|ref|ZP_01665894.1| protein of unknown function DUF214 [Thermosinus carboxydivorans
Nor1]
gi|121307172|gb|EAX48089.1| protein of unknown function DUF214 [Thermosinus carboxydivorans
Nor1]
Length = 281
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 45/272 (16%), Positives = 95/272 (34%), Gaps = 23/272 (8%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F V++A L +N+ S ++ +G++IGV A+I ++S+ G RE + +
Sbjct: 1 MFWE-SVLIALEGLKANKLR------SILTMLGIIIGVGAVIAMVSIGLGVREKVQNSIA 53
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ +++I +A A VS ++ S
Sbjct: 54 GLGSNLLIVTPGATSPTGVRLAAGSSTTLTNKDAQAIAREIAGVSMVAPSVSRQYQIVYG 113
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
N ++ + + V N +D+ +++ K + +GD++P+G
Sbjct: 114 NKNWITNVQGTTPEFLAVRNFTVETGTFFTNQDVDTRARVAVLGKTVAENLFGDISPVGQ 173
Query: 183 GIRSKSYTVLG------MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
IR + + ++ + L AQ + I V P+
Sbjct: 174 TIRINKAPFRVIGVLQAKGQSASGADQDDLIVIPLTTAQERMLGITYLHSISVQAASPEV 233
Query: 237 IEKTHENIVRIL----------GNGVVVIDWQ 258
I + E+I +L + + W+
Sbjct: 234 INQVQEDITTLLRTRHRLGPNVPDDLQCATWR 265
>gi|258544651|ref|ZP_05704885.1| ABC superfamily ATP binding cassette transporter, permease/ABC
protein [Cardiobacterium hominis ATCC 15826]
gi|258520069|gb|EEV88928.1| ABC superfamily ATP binding cassette transporter, permease/ABC
protein [Cardiobacterium hominis ATCC 15826]
Length = 663
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/263 (15%), Positives = 80/263 (30%), Gaps = 18/263 (6%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+AWR + ++ AF ++ +G++IG+ +++ V+++ G ++ +++ + + + +
Sbjct: 261 MAWRAILGHKLRAF------LTMLGIIIGIASVVSVVALGQGAQQQVLENISDLGSNTIQ 314
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS------ 124
L VI A +S + ++
Sbjct: 315 IFPGKFGDRRAGRIRTLVPSDAVILAKQDFIDSATPVVNASATVRHDNKELTGEVTGAGE 374
Query: 125 -DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
F D D V I + G V +
Sbjct: 375 QYFQVQNLPIVAGRSFNQKDIDDYAAVAILDQKGAQNLFNASAANGYAGALGQVILLRNT 434
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
V + RF +N VYM A ++VS I + + D +
Sbjct: 435 PVRIIGIVDTSSQSRFEVGNNISVYMPYTAAMNRLLGRSSVSSIILRISDSANPAVAEDA 494
Query: 244 IVRILGNGVVVIDWQQRYQIFFS 266
I RIL D+ F+
Sbjct: 495 ITRILTRRHGSQDF-----SLFN 512
>gi|323698918|ref|ZP_08110830.1| protein of unknown function DUF214 [Desulfovibrio sp. ND132]
gi|323458850|gb|EGB14715.1| protein of unknown function DUF214 [Desulfovibrio desulfuricans
ND132]
Length = 417
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/254 (11%), Positives = 73/254 (28%), Gaps = 18/254 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A R L ++ + ++ + ++IGV +++ + F+ MI + +
Sbjct: 5 FKIALRNLARYKRR------TALTSLLIVIGVCMVVMFSGLAGSFKSMMIGIITDSSIGH 58
Query: 69 VIQQKYYPLVDYQFIANRLDF-----------IPDVIKVLPFVSGQAFVSGLSSGGSGVL 117
+ + + L+ + V + + LS+
Sbjct: 59 LQIHRKGYFSSIDTMPLNLNMKGQGYKKIAETLDATPGVEAYAPRLKLGAVLSNYMESTN 118
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
VR + S G+ ++ + ++ + V
Sbjct: 119 VRLSAIDPKRETAVCTSLAGRMKQGAPGPGEDLLKKGQVVVPEKVAKSLGMKPGDSVVLV 178
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDA 236
G + + YM +++A+ V+ I V V D +
Sbjct: 179 ATNKDGSVNGMEFQISGIIEDIMGPGGKDAYMHIEDARSLLRTEPGEVTEIVVRVSDFNK 238
Query: 237 IEKTHENIVRILGN 250
++ ++ LG
Sbjct: 239 LKPVAASLAATLGQ 252
>gi|159184931|ref|NP_354801.2| hypothetical protein Atu1817 [Agrobacterium tumefaciens str. C58]
gi|159140210|gb|AAK87586.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 402
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/256 (14%), Positives = 83/256 (32%), Gaps = 11/256 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F +A R + N +F ++ +GV+IGV A+I ++++ NG E + +
Sbjct: 1 MFFETSR-LALRAISRNLLRSF------LTVLGVVIGVAAVIAMVTIGNGTTEQVKSELS 53
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ +++ + + DV + +SG V+ + + ++ G
Sbjct: 54 RLGTNMLFVRPGQFGPGRASTEAKRFDDRDVEAIRNQISGIRAVAPQNRSSAATVIFGGK 113
Query: 123 NSDFSYLQNSFSRFYGNVSND----FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
N S + + + G+ + +P G
Sbjct: 114 NHQTSVIGTTNDYLIAQDWTIALGRDFQPAEDRGGQIGCIIGETVRQELFGAENPVGQTI 173
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+ + + D + + M L+ Q +S I V +D +
Sbjct: 174 RVSNISCPVIGVLARKGQSGLGDDQDDTIIMPLKIHQRRIGGTTTISSIMVSAQDGVSTA 233
Query: 239 KTHENIVRILGNGVVV 254
K ++ +L +
Sbjct: 234 KVQSDLQNLLRERRRI 249
>gi|329942878|ref|ZP_08291657.1| permease family protein [Chlamydophila psittaci Cal10]
gi|313848050|emb|CBY17048.1| lipoprotein releasing system transmembrane protein [Chlamydophila
psittaci RD1]
gi|325507197|gb|ADZ18835.1| ABC transporter, permease protein [Chlamydophila psittaci 6BC]
gi|328815138|gb|EGF85127.1| permease family protein [Chlamydophila psittaci Cal10]
gi|328914719|gb|AEB55552.1| permease, putative [Chlamydophila psittaci 6BC]
Length = 503
Score = 50.9 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/234 (12%), Positives = 66/234 (28%), Gaps = 7/234 (2%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ E+++A++YL RK +I S S + + IV +SV+ G + I + +
Sbjct: 1 MKLELLIAFKYLIPRRKRLSSAIVSIFSIGIISLVTWLSIVFISVIYGLEQRWIHDLSQL 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ V I Y + +R + + + +
Sbjct: 61 HSPVKIVPSSVYYDSYYYQIDRHADLSLYTTKTIGEKLASSLIDPYDPNLDYSLPENFPL 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ G + L GI ++ P +
Sbjct: 121 PDQTSDGKLKDPVKIAFEVLNPYLGQNHAQLLEFEEGIGYVQMERMVDPNKTESRTFSQF 180
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEA-------QLYFNLENAVSGIEVFV 231
+ + R+ + + + Q + +L+N G + +
Sbjct: 181 IAYPSDEVYQNRVLPYEQTDYSSEILNPFNSSSEGWEQDFIHLQNTYRGASIIL 234
>gi|163787852|ref|ZP_02182299.1| ABC transporter, permease protein [Flavobacteriales bacterium
ALC-1]
gi|159877740|gb|EDP71797.1| ABC transporter, permease protein [Flavobacteriales bacterium
ALC-1]
Length = 411
Score = 50.5 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/270 (14%), Positives = 90/270 (33%), Gaps = 5/270 (1%)
Query: 5 SRFEVIVAWRYLFSNR-KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FE+ +A R + + K++ + I + IG++ +++ ++ G ++ + +V+
Sbjct: 1 MNFELFIAKRIIGNKTYKSSVSAPIIKIGIAAIAIGIIVMLIAIATGFGLQQKIRDKVVA 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFI--PDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
NGH+ I D + ++ P + Q + + G+
Sbjct: 61 FNGHIEITNYDTNASDESQVPISINQDFYPKFENIEGIKYVQGVAKKFAVIRTETDFEGV 120
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYG-DVTPM 180
N + G + L N + +
Sbjct: 121 VIKGVGADYNWEYFKEFLIEGRLPDYTGKRNEEILISNYLANRLGFKVGDRFETLFGEQL 180
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEK 239
R Y ++G++ F + D L+ Q E + + EVF++D I++
Sbjct: 181 DKLPRIIKYKIVGIYNSGFQELDEKFCIADLRHIQRLNKWEADQIGNFEVFIEDFSEIDE 240
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + + + + Q+Y F +
Sbjct: 241 KYTQVFQDVPSLLNATPITQKYWTVFEWVK 270
>gi|325293219|ref|YP_004279083.1| macrolide export ATP-binding/permease protein [Agrobacterium sp.
H13-3]
gi|325061072|gb|ADY64763.1| macrolide export ATP-binding/permease protein [Agrobacterium sp.
H13-3]
Length = 402
Score = 50.5 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/256 (14%), Positives = 83/256 (32%), Gaps = 11/256 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F +A R + N +F ++ +GV+IGV A+I ++++ NG E + +
Sbjct: 1 MFFETSR-LALRAISRNLLRSF------LTVLGVVIGVAAVIAMVTIGNGTTEQVKSELS 53
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ +++ + + DV + +SG V+ + + ++ G
Sbjct: 54 RLGTNMLFVRPGQFGPGRASTEAKRFDDRDVEAIRNQISGLRAVAPQNRSSAATVIFGGK 113
Query: 123 NSDFSYLQNSFSRFYGNVSND----FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
N S + + + G+ + +P G
Sbjct: 114 NHQTSVIGTTNDYLVAQDWTLALGRDFQPAEDRGGQIGCIIGETVRQELFGAENPVGQTI 173
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+ + + D + + M L+ Q +S I V +D +
Sbjct: 174 RVSNISCPVIGVLARKGQSGLGDDQDDTIIMPLKIHQRRIGGTTTISSIMVSAQDGVSTA 233
Query: 239 KTHENIVRILGNGVVV 254
K ++ +L +
Sbjct: 234 KVQSDLQNLLRERRRI 249
>gi|307129679|ref|YP_003881695.1| putative ABC transporter ATP-binding protein [Dickeya dadantii
3937]
gi|306527208|gb|ADM97138.1| Putative ABC transporter, ATP-binding protein [Dickeya dadantii
3937]
Length = 648
Score = 50.5 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/260 (11%), Positives = 87/260 (33%), Gaps = 15/260 (5%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A R + + R F ++ +G++IG+ +++ V+++ G ++ +++ + +
Sbjct: 258 AFRMALRAMNAQRMRTF------LTMLGIIIGIASVVSVVALGKGSQQQVLEHINAMGTS 311
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + A + + D+ + + +S+ + + S
Sbjct: 312 TLEIFPGKDFGDMRSAAIQTLRVNDLRPLEQQPYIHSVTPTVSTSVTLRYASKAVSVSVS 371
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS- 186
+ F G V + + + + + + + + +
Sbjct: 372 GVGEQFFTVRGYVLSQGNGFSPLSVERLTQEAVIDQNTRNKLFPNGENPLGQVIFLGTLP 431
Query: 187 -KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ V + F +N +++ ++ + I V VKD + + I
Sbjct: 432 CRIIGVTTRKQSGFGSDENLNIWVPYTTVMRRMVGQSYLRSITVRVKDNIDLSVAQQGIT 491
Query: 246 RILGNGVVVIDWQQRYQIFF 265
+IL Q + FF
Sbjct: 492 QIL-------TRQHGNKDFF 504
>gi|78043327|ref|YP_361048.1| ABC transporter permease [Carboxydothermus hydrogenoformans Z-2901]
gi|77995442|gb|ABB14341.1| ABC transporter, permease protein [Carboxydothermus
hydrogenoformans Z-2901]
Length = 396
Score = 50.5 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 43/260 (16%), Positives = 85/260 (32%), Gaps = 17/260 (6%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + VA L++N+ +F ++ +GV+IGVMA++ V+S+ G +E + ++
Sbjct: 1 MELKESLRVALSSLWANKMRSF------LTALGVIIGVMAVVAVLSIGQGGKEATLGQMK 54
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
I ++ + RL + + V
Sbjct: 55 SIGSNLFFMYAKTIGQETLRPDQRLSLDDVRAVEAGAPAVKRIVPSGYDMAK----GASG 110
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + Y V N +I +D+ +++ D+ +G G
Sbjct: 111 SKKIDLIVVGTIPEYKEVRNIQLVNGRFLIEEDVKYFRKVAVIDEKGAKELFGTADATGK 170
Query: 183 GIRSKSYTVL------GMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
I+ + N +Y+ L Q FN V +E D
Sbjct: 171 TIKIRGLPFTVVGVSKTETLSFNMGMPNYRIYLPLTSWQRLFNT-TRVDQLEGEAVSADK 229
Query: 237 IEKTHENIVRILGNGVVVID 256
+++ E RIL D
Sbjct: 230 VKEAIEQTKRILNKRHRTED 249
>gi|88857929|ref|ZP_01132571.1| ABC-type transport system involved in lipoprotein release
permease component-like [Pseudoalteromonas tunicata D2]
gi|88819546|gb|EAR29359.1| ABC-type transport system involved in lipoprotein release
permease component-like [Pseudoalteromonas tunicata D2]
Length = 469
Score = 50.5 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 10/81 (12%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M +F R AWR L NRK S ++ +G+ +G+ I +++M+G D+I
Sbjct: 1 MGLFIRL----AWRNLIRNRKR------SAVTALGITLGIGFCITTLAIMDGLSNDLITG 50
Query: 61 VLGINGHVVIQQKYYPLVDYQ 81
V + L Q
Sbjct: 51 TTQGQVGHVQVHQKEYLAKRQ 71
>gi|325968856|ref|YP_004245048.1| hypothetical protein VMUT_1341 [Vulcanisaeta moutnovskia 768-28]
gi|323708059|gb|ADY01546.1| hypothetical protein VMUT_1341 [Vulcanisaeta moutnovskia 768-28]
Length = 415
Score = 50.5 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/242 (11%), Positives = 63/242 (26%), Gaps = 8/242 (3%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG-INGH 67
+AW + R + + +G++I ++AL + + + G++ +
Sbjct: 7 FKLAWSAAWERRGR------TIGAIVGIVIAIVALGLAIGMGQGYKTLTTSFFERIFGTN 60
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
V + IP V +P +S A V + ++
Sbjct: 61 TVFLFPGQNSELTITSVYEVMNIPHVTNAIPILSTVARVDINGHEVTATIIGATEQEIMQ 120
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ +G D+A +
Sbjct: 121 LYGVTSLNNAIMAGTPILTPGLAFVGYDVAFTSTGQQIA-YPGQVMVITAPGGSELTYTI 179
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ N +++ F+ VSGI V+V P+ I + +
Sbjct: 180 GAVMQQSGIGVIGLNPNNAIFIDENTFLSQFDPSGIVSGIIVYVDSPNNINYVTNELKAL 239
Query: 248 LG 249
Sbjct: 240 FP 241
>gi|305663836|ref|YP_003860124.1| protein of unknown function DUF214 [Ignisphaera aggregans DSM
17230]
gi|304378405|gb|ADM28244.1| protein of unknown function DUF214 [Ignisphaera aggregans DSM
17230]
Length = 412
Score = 50.5 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/252 (16%), Positives = 94/252 (37%), Gaps = 13/252 (5%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A++ L + + ++ IG+ IG +AL+++ SV++G+ + + ++ + + ++
Sbjct: 18 LAFKALTERKLR------ASLTIIGIAIGPLALVMISSVVDGYADYISNQIQSLGQNTIV 71
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
+ N L I V + PF S QA V + D +
Sbjct: 72 LFPASGYRFTENDLNMLRSIEGVSRAEPFYSVQASVKIEGEDKIVFVYAL--PIDVIFQA 129
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
+ +IG LA + D ++++ T G + ++
Sbjct: 130 FGGLEVLEGSIPSESQYSYAVIGYKLAFKDNRKVNDIGDVITLTFIRTEGGRSVIRRATV 189
Query: 191 VL----GMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
++ F F + V++ L + L N SGI + + + + + + +
Sbjct: 190 LVSAILNEFGGAFILSPDTTVFLPLDAGKKLLGL-NEWSGILIISRSSEDVPRIVKTLQE 248
Query: 247 ILGNGVVVIDWQ 258
I N +I +Q
Sbjct: 249 IYRNSADIISFQ 260
>gi|255534864|ref|YP_003095235.1| ABC transporter, permease protein [Flavobacteriaceae bacterium
3519-10]
gi|255341060|gb|ACU07173.1| ABC transporter, permease protein [Flavobacteriaceae bacterium
3519-10]
Length = 409
Score = 50.5 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/261 (16%), Positives = 101/261 (38%), Gaps = 15/261 (5%)
Query: 5 SRFEVIVAWRYLFSN-RKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+F + + + FS KN + FI + V +GV+ ++ +S G + + +R+
Sbjct: 1 MKFPLYFSKKIAFSKDNKNNLSRVIVFIGRLSVALGVIVSLLTVSTGVGSKRAIKERMAD 60
Query: 64 INGHVVIQQKYYPLVDYQF-------IANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
+GH+ I+ K +++ +PDV FV+ + + +
Sbjct: 61 FSGHISIKSKQSNSSYNSSVLTTEGLQLDKIKALPDVATTQNFVAVSGILRNEHNFAGII 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
+ D + ++ G+ I + +A++L +++ D I +
Sbjct: 121 FKGVGKDFDAERFKKFLISGTTPAISEDGFNSGIAISQKIAQDLHLNVKDSIVAVFSKES 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVS-GIEVFVKDPD 235
+ + V+G+++ D+ + + A+ ++ + GI+VF+K+ +
Sbjct: 181 -----RSPLYRKFEVVGIYKTDIKMIDDLFIIGDINHARRIQGMKEKQTGGIDVFLKNIN 235
Query: 236 AIEKTHENIVRILGN-GVVVI 255
I+ I ++ G V
Sbjct: 236 NIDDDAPVIDKLAGYKNYTVK 256
>gi|261885846|ref|ZP_06009885.1| permease, putative [Campylobacter fetus subsp. venerealis str.
Azul-94]
Length = 247
Score = 50.5 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 39/109 (35%), Gaps = 4/109 (3%)
Query: 161 GISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL 220
+ +KI ++ T + + K + + F YD Y + +
Sbjct: 1 MLGENEKITLIFMQNSPTGLAIVPTMKRFNAVADFSSGLIAYDKAYSYTDVNALRKVLGY 60
Query: 221 EN-AVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
++ GI ++ ++P + + IL G + W ++ FFS
Sbjct: 61 DDDKFDGIHIYSQNPKQ-DIIK--LNDILPPGQKAVGWWEQNGNFFSAL 106
>gi|254787514|ref|YP_003074943.1| macrolide export ATP-binding/permease MacB [Teredinibacter turnerae
T7901]
gi|237683732|gb|ACR10996.1| macrolide export ATP-binding/permease protein MacB [Teredinibacter
turnerae T7901]
Length = 652
Score = 50.5 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/251 (11%), Positives = 81/251 (32%), Gaps = 15/251 (5%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A R L SN + ++ +G++IGV +++ ++++ G ++D+I R+ + +
Sbjct: 260 ALRMAMRSLRSN------IFRTVLTLLGIVIGVSSVVAMLAIGEGAKQDVIDRISAMGTN 313
Query: 68 VVIQQKYYPLVDYQFIANRLDFIP-------DVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
++ + + A+ D+ + + + +
Sbjct: 314 MLTVFPSWRRPGMRGGASTALTFDLADALGRDLDNIAAVLPEIQGSATVRFTDQDYQTNI 373
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + ++ G D D + + S V
Sbjct: 374 TATAANLPTTRNWPLAQGVFFTDQDSEDYAPVA--VLGKTVYSNLFPDGGNPVGRYVLIN 431
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ + + ++++ L+ L +N + I V V D I++T
Sbjct: 432 NIPFQIIGLMTGKGSSGFGGRDQDDVIFVPLKTGGLRLFGQNYLRSITVAVADAAQIDET 491
Query: 241 HENIVRILGNG 251
+ + +
Sbjct: 492 EQQLTAYIQQQ 502
>gi|294636791|ref|ZP_06715129.1| lipoprotein releasing system, transmembrane protein LolC
[Edwardsiella tarda ATCC 23685]
gi|291090006|gb|EFE22567.1| lipoprotein releasing system, transmembrane protein LolC
[Edwardsiella tarda ATCC 23685]
Length = 259
Score = 50.5 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 4/124 (3%)
Query: 147 GKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGM 206
I+G LA +LG+ GD++ ++ P I S+ + + D
Sbjct: 1 QYRAILGSQLAASLGVKAGDRVRLMVPSASQFTPMGRIPSQRIFTVIGTFNADSEVDQTQ 60
Query: 207 VYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFF 265
+ ++ Q+A +SG +F++ P IE + L G+V DW+ R F
Sbjct: 61 LLVNQQDASRLMRYPLGHISGWRLFMQRPLDIEAL---VAHPLPEGLVWQDWRARKGELF 117
Query: 266 SCYE 269
+
Sbjct: 118 QAVK 121
>gi|282165654|ref|YP_003358039.1| putative ABC transporter [Methanocella paludicola SANAE]
gi|282157968|dbj|BAI63056.1| putative ABC transporter [Methanocella paludicola SANAE]
Length = 402
Score = 50.5 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/261 (9%), Positives = 75/261 (28%), Gaps = 20/261 (7%)
Query: 27 IASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVD------- 79
+ +S +G++IGVMA++V++++ +G + ++ + ++ +
Sbjct: 19 FKTMMSSLGIIIGVMAIVVMLTLGDGLYSGVSQQFGSLELDTLVVLPMGIDMQAGTLSQK 78
Query: 80 --YQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFY 137
+ + I V + + G+S Y +
Sbjct: 79 PPAKLTDRDVSLIMGTPGVTEVYPEISVSGMTVTYRDENRTMGVSGISPQYFSGRYMEQV 138
Query: 138 GNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRM 197
++ N + ++ +
Sbjct: 139 DKGRYLSQSDSYSVVLGSRVANGTFGKEIRTGSYITITNIYNGRSQEYKVVGVMKERNAS 198
Query: 198 RFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL-----GNGV 252
N +YM+ + + ++ S I V + ++ + +++ L G
Sbjct: 199 ILVGDPNSAIYMTKAGLKALSD-QDTYSYIGVRAESVESADSVAKSVEDSLNRLHRNEGF 257
Query: 253 VVIDWQQRYQIF----FSCYE 269
V+ Q+ + F+ +
Sbjct: 258 SVLT-QKMFADLITQVFAMIK 277
>gi|295133007|ref|YP_003583683.1| lipoprotein releasing system transhypothetical protein
[Zunongwangia profunda SM-A87]
gi|294981022|gb|ADF51487.1| lipoprotein releasing system transmembrane protein [Zunongwangia
profunda SM-A87]
Length = 410
Score = 50.5 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 48/269 (17%), Positives = 101/269 (37%), Gaps = 5/269 (1%)
Query: 5 SRFEVIVAWRYLFSNR-KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FE+ V R + +N+ K++ S I+ + IGV+ ++V + G ++ + ++
Sbjct: 1 MNFELFVVKRLISANKDKSSISSPIIKIAIAAIAIGVVMMLVSFATGLGLQKKIRDKIAA 60
Query: 64 INGHVVIQQKYYPLVDY--QFIANRLDFIPDVIKVLPFVSGQAFVSG-LSSGGSGVLVRG 120
NGH++I + + ++ DF PD V Q + +
Sbjct: 61 FNGHIIITNYDNNSSEVTLEPVSKDQDFYPDFNAVSGITHVQGTATKAGIIRTADDFEGV 120
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
I + SF + + D + ++R L + K+ +P +
Sbjct: 121 IVKGVGTDYDWSFFKDFLVAGKLPDYSSNLNDEVLISRYLANRLHLKVGDRAPTYFLREG 180
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEK 239
+ + ++G++ F D+D + L+ Q +N V EVF+ D D +++
Sbjct: 181 RDRPFVRGFKIVGIYDSGFQDFDELYLIADLRHIQKLNGWKDNEVGNFEVFINDFDQLDE 240
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ G+ + Q+Y F
Sbjct: 241 KWNEVYLNTGSFLDAQHIGQKYYNIFEWL 269
>gi|323496631|ref|ZP_08101683.1| ABC-type transport system involved in lipoprotein release permease
component [Vibrio sinaloensis DSM 21326]
gi|323318284|gb|EGA71243.1| ABC-type transport system involved in lipoprotein release permease
component [Vibrio sinaloensis DSM 21326]
Length = 419
Score = 50.5 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 48/281 (17%), Positives = 81/281 (28%), Gaps = 25/281 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M V VA L N++ S +S + + I V AL V E + +
Sbjct: 1 MGKLIPLSVRVALLNLQRNKRR------SLLSMLIIAIAVFALTSVGGFGLYTYESLKES 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANR-----------LDFIPDVIKVLPFVSGQAFVSGL 109
GH+ I Q Y +D + L V + P + +S
Sbjct: 55 TARDTGHITISQPGYFEMDEEMPMENGLADSEQISRSLLTNKAVRGIQPRIEFTGLISNG 114
Query: 110 SSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN 169
+ V R +S+ + +
Sbjct: 115 AKSTIFVGSGVNEREFDMKGPFLDVREGKTLSSVQSSRYDPSAPEVMLAVDLAKNLKVTV 174
Query: 170 ILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV 229
T + + + V G++ P+ D +Y+ +Q Q + N VS + V
Sbjct: 175 GDWVTLLATTTDGALNAFDFQVRGIYSTGVPELDKRQLYLHIQSVQELLST-NKVSTLSV 233
Query: 230 FVKDPDAIEKTHENIVRILG-----NGVVVIDWQQRYQIFF 265
F+ + D I L + + WQ R FF
Sbjct: 234 FLFETDKTATVQRWIDERLSLQTLAQPIELTPWQDR--AFF 272
>gi|224370977|ref|YP_002605141.1| ABC-type lipoprotein release transporter, permease component
[Desulfobacterium autotrophicum HRM2]
gi|223693694|gb|ACN16977.1| ABC-type lipoprotein release transporter, permease component
[Desulfobacterium autotrophicum HRM2]
Length = 414
Score = 50.5 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 45/281 (16%), Positives = 96/281 (34%), Gaps = 36/281 (12%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A R L ++ + ++ + +GV+A+++ +SV F+ MI +V
Sbjct: 5 IKLAIRNLQRYKRR------TILTSALITLGVIAVLLFISVSGSFKAMMIAQVTDSMLGH 58
Query: 69 VIQQKYYPLVDYQF--------------IANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
+ + L + LD V + A S + +
Sbjct: 59 LQVHRKGYLASMDSLPLDLNLQAPQAARVKKILDASKAVEAYSLRIRLGAMFSNFTETTN 118
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
L + + + R + +I+ + +AR + + +GD I +++
Sbjct: 119 IRLNAVNPEQEMATVPMLAERIIKGSKEGLLKKGEIIVPELIARGMKVDVGDTIVLVATN 178
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKD 233
D + G +S + L +A+ +E N +S I V +KD
Sbjct: 179 KDGSVNGQPFVVRSILEGIS------GPGGRDGVIHLSDARTLLRIEDNQISEIAVRLKD 232
Query: 234 PDAIEKTHENIVRILG--------NGVVVIDWQQRYQIFFS 266
D + + ++ + LG V W+ FF+
Sbjct: 233 MDLMTQVFASLQKQLGAIKNNMDKPVFEVHTWENL-SPFFN 272
>gi|254508400|ref|ZP_05120521.1| ABC-type transport system, involved in lipoprotein release,
permease component [Vibrio parahaemolyticus 16]
gi|219548713|gb|EED25717.1| ABC-type transport system, involved in lipoprotein release,
permease component [Vibrio parahaemolyticus 16]
Length = 419
Score = 50.5 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 48/281 (17%), Positives = 81/281 (28%), Gaps = 25/281 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + VA+ L NR+ S +S + + I V AL E + +
Sbjct: 1 MGKLIPLSIRVAFLNLQRNRRR------SVLSILIIAIAVFALTAAGGFGLYTYESLKES 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANR-----------LDFIPDVIKVLPFVSGQAFVSGL 109
GH+ I Q Y +D + L + + P + +S
Sbjct: 55 TARETGHITISQPNYFEMDEEMPLENGLADSATISKALIANKAIRGIQPRIEFNGLISNG 114
Query: 110 SSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN 169
S V R +SN + +
Sbjct: 115 SKSTIFVGSGVNDREFDMKGPFLDIRQGKTLSNVNSPRYDESEPEVMLGVDLAKNLKVSV 174
Query: 170 ILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV 229
T + + + V G+F P+ D +Y+ + AQ + VS + V
Sbjct: 175 GDWVTLLATTSDGALNAFDFKVRGIFSTGVPELDKRQLYLHILSAQDLL-ASDRVSTLSV 233
Query: 230 FVKDPDAIEKTHENIVRILGN-----GVVVIDWQQRYQIFF 265
F+ D + + L N + + WQ R FF
Sbjct: 234 FLFDTQKTQTVQNWVDTTLSNIDLAQEIELTPWQDR--AFF 272
>gi|298206618|ref|YP_003714797.1| ABC transporter, permease protein [Croceibacter atlanticus
HTCC2559]
gi|83849248|gb|EAP87116.1| ABC transporter, permease protein [Croceibacter atlanticus
HTCC2559]
Length = 380
Score = 50.5 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/243 (14%), Positives = 84/243 (34%), Gaps = 11/243 (4%)
Query: 34 IGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDV 93
+ + +GV+ +++ + G + + ++ NGH+ I +
Sbjct: 1 MAIAVGVIMMLIAFATGLGLQNKIRDKISAFNGHITISNFDNNNTKVSLKPISKNQDFYP 60
Query: 94 IKVLPF-------VSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDR 146
V+ +A V GV+++G+ + + +
Sbjct: 61 EFKSVNGITHVQGVAFKAGVIRTEDDFEGVVIKGLDTDYNWDVFKDYVVQGRLPNYKESL 120
Query: 147 GKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGM 206
V+I + + L I +GDK + +++ V+G++ F ++D
Sbjct: 121 NDEVLISEYTSNRLNIKLGDKAVTYFLRDNT---LERPLLRAFKVVGIYNSGFQEFDETY 177
Query: 207 VYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFF 265
V ++ + +N V EVF+ D +E+ + + + + +Q+Y F
Sbjct: 178 VIGDIRHIRRLNKWNDNDVGHFEVFIDDFSELEEKGVEVYEHIDSTLDSKTIKQQYYSIF 237
Query: 266 SCY 268
Sbjct: 238 EWL 240
>gi|290892443|ref|ZP_06555437.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
gi|290558009|gb|EFD91529.1| conserved hypothetical protein [Listeria monocytogenes FSL J2-071]
Length = 388
Score = 50.5 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/268 (12%), Positives = 88/268 (32%), Gaps = 20/268 (7%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
MS+F + +A + L S + F ++ +G++IGV ++I+++S+ +++ +
Sbjct: 1 MSLFQ--SIKLALKQLLSTKFRTF------LTMLGIIIGVFSVILLVSIGEAISKNVATQ 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + ++V Y + +F + ++ Q S + V G
Sbjct: 53 LGDMGSNLVSVNFYSDNPNDKFTYKDAKSLLKGNEIGSPEVMQTKEVRTSDETASNQVAG 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
I+ S D + V + + + +
Sbjct: 113 ITEDYASIKNLEVVSGRFCSDVDVRYAQKVTVIGSELAKTYFKNQNPVGKYLQIAGSRYI 172
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+G+ + + +++ + A+ F ++V + K+ + + T
Sbjct: 173 VIGVLKEKGES-------LFGSADKKLFIPITSAERLF-TTDSVDLYYIQTKNTEQVPAT 224
Query: 241 HENIV----RILGNGVVVIDWQQRYQIF 264
+ I ++ N + Q
Sbjct: 225 VKRIEQKMSQLFPNNKDAYTIVNQQQAL 252
>gi|322632920|gb|EFY29663.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Montevideo
str. 515920-1]
Length = 327
Score = 50.5 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/174 (13%), Positives = 50/174 (28%)
Query: 96 VLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKD 155
+ + + V+G+ L S + + F G+ II
Sbjct: 6 AAAPYINFTGLVESGANLRAIQVKGVDPKQEQQLSALPSFVQNHAWDHFKAGEQQIIIGK 65
Query: 156 LARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQ 215
+ + + + + D+ + L++AQ
Sbjct: 66 GVADALNVKQGDWVSIMIPNANADHKLLQPKRVRLHVIGILQLSGQLDHSFAMIPLEDAQ 125
Query: 216 LYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
Y ++ +VSGI + V D K + + + V + W Y + +
Sbjct: 126 QYLDMGASVSGIALKVHDVFNANKLVRDAGEVTNSYVYIKSWIGTYGYMYRDIQ 179
>gi|26990902|ref|NP_746327.1| efflux ABC transporter ATP-binding protein [Pseudomonas putida
KT2440]
gi|81840489|sp|Q88F88|MACB_PSEPK RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|24985917|gb|AAN69791.1|AE016615_7 ABC export system, permease/ATP-binding protein, putative
[Pseudomonas putida KT2440]
gi|313497943|gb|ADR59309.1| Macrolide export ATP-binding/permease protein macB [Pseudomonas
putida BIRD-1]
Length = 654
Score = 50.5 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/246 (11%), Positives = 75/246 (30%), Gaps = 6/246 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +
Sbjct: 266 SLQAAWRVMWINR------FRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMAAFGSN 319
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
++ P + LD + + ++ + G + +
Sbjct: 320 ILYLNGSPPTLREPAGRITLDDVAAIGELPQVKHIMPVLGEKMMVRHGNNSQQFYVGGNN 379
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ + F + +P G +G
Sbjct: 380 TFFPEIFNWPAVEGSFFTETDEASSAAVAVIGQKVREKMLAPGSNPIGQYLLIGNVPFQV 439
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ G +G + + A + I + +D ++ T I R+
Sbjct: 440 VGILAGKGASSGDQDSDGRIVVPFSAAAIRLFGHRDPDYIAIAARDSGQVKDTEAAIDRL 499
Query: 248 LGNGVV 253
L
Sbjct: 500 LRQRHQ 505
>gi|269964759|ref|ZP_06178996.1| hypothetical protein VMC_04260 [Vibrio alginolyticus 40B]
gi|269830419|gb|EEZ84641.1| hypothetical protein VMC_04260 [Vibrio alginolyticus 40B]
Length = 422
Score = 50.5 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/284 (15%), Positives = 86/284 (30%), Gaps = 28/284 (9%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M V +AW L NR+ S +S + + I V AL + + +
Sbjct: 1 MGKLIPVSVRLAWLNLQRNRRR------SLLSMLIIAIAVFALTCAGGFGLYTYDSLKES 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIA-----------NRLDFIPDVIKVLPFVSGQAFVSGL 109
GH+ + Y + + +L + +V V P V +S
Sbjct: 55 TARDTGHLTLTTPGYFAKEEEMPLSNGLTHADDITKQLIGLNEVRGVQPRVEFSGLISNG 114
Query: 110 SSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN 169
+ + + R +SN + + +
Sbjct: 115 NKSSIFIGIGVNEREFDMKGPFLDVREGQTLSNIHASRYDPAEPEVMLGVDLANNLSVHV 174
Query: 170 ILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV 229
T + + + V G++ P+ D +Y+ + AQ + VS + V
Sbjct: 175 GDWITLLATTTDGALNAYDFKVRGIYSTGVPELDKRQLYVHINSAQSLLG-SDKVSALSV 233
Query: 230 FVKDPDAIEKTHENIVRILG--------NGVVVIDWQQRYQIFF 265
F+ D + + + +L + + WQ+R FF
Sbjct: 234 FLFDTSLTNQVEQLVASVLSKQKQNFGDQDIEITPWQER--AFF 275
>gi|168215951|ref|ZP_02641576.1| putative permease [Clostridium perfringens NCTC 8239]
gi|182381700|gb|EDT79179.1| putative permease [Clostridium perfringens NCTC 8239]
Length = 431
Score = 50.5 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M F+ + WR ++ + + + +GV+IG +A+ +++S+ NGF +
Sbjct: 1 MK-FNDL-FSIIWRNMWKRKTR------TIFTMMGVIIGCLAIFIIISITNGFERYLTYE 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIA 84
+ + VI + +
Sbjct: 53 MESLMDTSVISIYPNWKSETEDNK 76
>gi|320157843|ref|YP_004190221.1| lipoprotein release ABC transporter permease [Vibrio vulnificus
MO6-24/O]
gi|319933155|gb|ADV88018.1| ABC-type transport system, involved in lipoprotein release,
permease component [Vibrio vulnificus MO6-24/O]
Length = 421
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/272 (13%), Positives = 90/272 (33%), Gaps = 23/272 (8%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AW L N + S +S + + I V AL + + + GH
Sbjct: 12 SLRLAWLNLKRNGRR------SLLSVLIIAIAVFALTSAGGFGLYTYDSLKESTARDTGH 65
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLS----------SGGSGVL 117
+ I + + + + PD + + S + +
Sbjct: 66 ITISTPGFFAKEEEMPLSNGLSQPDDLIASVMGLNEVRGVQPRIEFNGLISNGSKSAIFV 125
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINI-LSPYGD 176
G+++ +F G ++ + ++ + ++ + +
Sbjct: 126 GIGVNDREFDMKGPFLDVREGKTLSNPRGQRYDPAEPEVMLAMDLARNLNVTVGDWITLL 185
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
T + + + V G++ P+ D +Y+ + AQ + VS I VF+ + +
Sbjct: 186 ATTTDGALNAYDFKVRGLYATGVPELDKRQLYIHIDSAQSLL-ATDKVSVISVFLFETEK 244
Query: 237 IEKTHENIVRIL---GNGVVVIDWQQRYQIFF 265
+++ +L + + WQ+R FF
Sbjct: 245 TAAVQQHLSALLSQFSQELELTPWQER--AFF 274
>gi|218258187|ref|ZP_03474589.1| hypothetical protein PRABACTJOHN_00243 [Parabacteroides johnsonii
DSM 18315]
gi|218225682|gb|EEC98332.1| hypothetical protein PRABACTJOHN_00243 [Parabacteroides johnsonii
DSM 18315]
Length = 356
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/83 (21%), Positives = 33/83 (39%)
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ V G++ YD + + L + F+ E VS IE+ + I I
Sbjct: 137 EYAFVGGVYATNQQMYDENFILLPLSMVRSLFSYEKEVSAIELSLVPGADIHSVKSRIKS 196
Query: 247 ILGNGVVVIDWQQRYQIFFSCYE 269
+LG+ V D ++ + F +
Sbjct: 197 LLGDNFSVKDRYEQQEASFRMMQ 219
>gi|126667501|ref|ZP_01738472.1| transmembrane ATP-binding ABC transporter protein [Marinobacter sp.
ELB17]
gi|126628093|gb|EAZ98719.1| transmembrane ATP-binding ABC transporter protein [Marinobacter sp.
ELB17]
Length = 649
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/262 (13%), Positives = 86/262 (32%), Gaps = 18/262 (6%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH- 67
A R + + ++ +G++IGV ++I ++++ G R+D++ R+ +
Sbjct: 257 WFEALRSAVHSLSTNL--FRTALTLLGIVIGVASVITMLAIGEGARQDIVDRISAMGSDL 314
Query: 68 --------VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
++ + + IP + +P V+G + + +
Sbjct: 315 LLVRPGGPDQRGGRWSVTTLVPSDYHAIRDIPGIRAAVPEVTGGQTLRFGNRDHQTEVNG 374
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + + N ++ ++GK +A +L SP G
Sbjct: 375 TAYEFPAARQWPVVAGTFFNEVDENRYAAVAVLGKTVAESL-------FPEQSPLGHYLM 427
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+ + + + + +V + A L +N + I V V D +
Sbjct: 428 VNNVLFQVIGVMDERGASPWGQDQDDVVLVPYTTANLRIFGQNHLRNITVAVADSADMNA 487
Query: 240 THENIVRILGNGVVVIDWQQRY 261
+ + L D+Q R
Sbjct: 488 VQDQVHSTLLTRHGSEDFQIRN 509
>gi|326800802|ref|YP_004318621.1| hypothetical protein Sph21_3413 [Sphingobacterium sp. 21]
gi|326551566|gb|ADZ79951.1| protein of unknown function DUF214 [Sphingobacterium sp. 21]
Length = 408
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A R + N+ AF ++ +G++IGV A+I +MS+ G ++ + + ++
Sbjct: 7 LRIALRAIQRNKLRAF------LTMLGIIIGVAAVITMMSIGEGSKQSIQNTFSSMGSNM 60
Query: 69 VIQQKYYPLVDY 80
+ Y
Sbjct: 61 ITIMPYNNSPMP 72
>gi|237794507|ref|YP_002862059.1| putative ABC transporter, permease protein [Clostridium botulinum
Ba4 str. 657]
gi|229263573|gb|ACQ54606.1| putative ABC transporter, permease protein [Clostridium botulinum
Ba4 str. 657]
Length = 427
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/284 (12%), Positives = 85/284 (29%), Gaps = 39/284 (13%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING---- 66
+ WR L + F ++ +GV+IG +A+ V++S+ NGF + M ++
Sbjct: 9 IIWRNLLKRKGRTF------LTMLGVIIGSIAIYVIISLGNGFEKYMSSQLNSFGDVNII 62
Query: 67 -----------HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSG 115
+ K + L+ + V +P ++ A ++ S
Sbjct: 63 NIFPYSDSTATYQGGNIKNRKKILNDKTLKELNKLEFVKYSIPKLNANADIAYKKSEMKS 122
Query: 116 VLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKI------- 168
+ G+S ++S Y N S + + L + + ++
Sbjct: 123 SNLTGMSFKNYSKDHELLFGKYPNDSKNEVVLGYKLAAYLLNKKDVDKVKEEEIKKILRK 182
Query: 169 ----NILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMS----LQEAQLYFNL 220
+ P K + + ++ + F
Sbjct: 183 KLKVKVYRPNEKGEEEWTTYTVKVSGICKQDFSDDYQIKAPLSFIKDILIYKNNDEKFLK 242
Query: 221 ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIF 264
I++ +K+ + + + + NG + ++
Sbjct: 243 NKGYESIDLVLKNQEKSSQAEKYLKD---NGYLYQSLKEMQNSI 283
>gi|157692114|ref|YP_001486576.1| ABC transporter ATP-binding protein [Bacillus pumilus SAFR-032]
gi|157680872|gb|ABV62016.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Bacillus pumilus SAFR-032]
Length = 397
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/259 (12%), Positives = 78/259 (30%), Gaps = 12/259 (4%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M +F +A + +++ S ++ +G++IGV ++I V+++ G + +
Sbjct: 1 MKLFENI--KIAMNSVLAHKLR------SILTMLGIIIGVGSVIAVVAIGQGGEQMLKGS 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ G N V + D + + SS G+ +R
Sbjct: 53 ISGPNNTVDMTYTPSDEELNANPNALFDATFTEEDIKSIKTMNGVNQVASSTAQGMQLRF 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLG---ISIGDKINILSPYGDV 177
+ + + + S G+ + + K
Sbjct: 113 QDTTVDATVNGINEGYTNVHSLQIAEGQNLKDIDFRSGRRAALISEGLQKELFNGKKALG 172
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
+ M + + + +D VY+ F + N + + V D +
Sbjct: 173 EMIWMNGQPVEVIGVLAKQKGMLSFDMNEVYVPFAMLTSTFGI-NEYDKLSIQVAHADQM 231
Query: 238 EKTHENIVRILGNGVVVID 256
++ +N +L D
Sbjct: 232 KEVGKNAAALLNENHHTED 250
>gi|319940844|ref|ZP_08015183.1| hypothetical protein HMPREF9464_00402 [Sutterella wadsworthensis
3_1_45B]
gi|319805726|gb|EFW02507.1| hypothetical protein HMPREF9464_00402 [Sutterella wadsworthensis
3_1_45B]
Length = 402
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/267 (13%), Positives = 84/267 (31%), Gaps = 13/267 (4%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++A R ++ N S ++ +GV+IGV A+I ++++ NG + + +
Sbjct: 5 AFLLAIRQIWRNPLR------SLLTVLGVVIGVAAVITMVTIGNGASTAIKTEIESFGNN 58
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
++ + L Q + + DV + ++G V+ S V+ G +
Sbjct: 59 QLMLRPGMRLGPGQKVGAPNFRLDDVTALRTQLAGIEAVAPQVSKSMTVVANGRNWQTSV 118
Query: 128 YLQNSFSRFYGNVSNDFDRGKGV----IIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
N+ N + + R ++ + G G
Sbjct: 119 VGTNTDYFTIDNRTFEDGRNFEEAEERAGSAVCVIGSTVANELFGTTQNVVGRQIRTGGF 178
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ + ++ M L+ Q +N VS + + + E+
Sbjct: 179 SCRVIGLLKTKGTAAMGGDQDDLLVMPLKSVQRRILGDNRVSALLIRINADSDRERLKTA 238
Query: 244 IVRILGNGVVVIDWQQRYQIFFSCYES 270
+ ++ + F ++
Sbjct: 239 VKDLMRERRSLSSGDDDN---FQIMDT 262
>gi|37675675|ref|NP_936071.1| hypothetical protein VVA0015 [Vibrio vulnificus YJ016]
gi|37200214|dbj|BAC96041.1| uncharacterized protein conserved in bacteria [Vibrio vulnificus
YJ016]
Length = 421
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/272 (13%), Positives = 89/272 (32%), Gaps = 23/272 (8%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AW L N + S +S + + I V AL + + + GH
Sbjct: 12 SLRLAWLNLKRNGRR------SLLSVLIIAIAVFALTSAGGFGLYTYDSLKESTARDTGH 65
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLS----------SGGSGVL 117
+ I + + + + PD + + S + +
Sbjct: 66 ITISTPGFFAKEEEMPLSNGLSQPDDLIASVMGLNEVRGVQPRIEFNGLISNGSKSAIFV 125
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINI-LSPYGD 176
G+++ +F G ++ + ++ + ++ + +
Sbjct: 126 GIGVNDREFDMKGPFLDVREGKTLSNPRGQRYDPAEPEVMLAMDLARNLNVTVGDWITLL 185
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
T + + + V G++ P+ D +Y+ + AQ + VS I VF+ + +
Sbjct: 186 ATTTDGALNAYDFKVRGLYATGVPELDKRQLYIHIDSAQSLL-ATDKVSVISVFLFETEK 244
Query: 237 IEKTHENIVRIL---GNGVVVIDWQQRYQIFF 265
+ + +L + + WQ+R FF
Sbjct: 245 NTAVQQRLSALLSQFSQELELTPWQER--AFF 274
>gi|242240603|ref|YP_002988784.1| ABC transporter [Dickeya dadantii Ech703]
gi|242132660|gb|ACS86962.1| ABC transporter related [Dickeya dadantii Ech703]
Length = 647
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/256 (10%), Positives = 83/256 (32%), Gaps = 8/256 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A R + + R F ++ +G++IG+ +++ V+++ G ++ +++ + +
Sbjct: 257 AFKMALRAMNAQRMRTF------LTMLGIIIGIASVVSVVALGKGSQQQVLEHINAMGTS 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + A + I D+ + + +S+ + ++ +
Sbjct: 311 TLEIFPGKGFGDMRSGAIQTLRINDLRPLEQQPYIHSVTPTVSTSITLRYANKAVSASVN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ F G +R + + + + +
Sbjct: 371 GVGEQFFTVRGYTLTTGNRFTALSVERLAQEAVIDQNTRDKLFPHGENPLGQVIFLGTLP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ V + F +N +++ ++ + I V VKD + + I
Sbjct: 431 CRIIGVATKTQSGFGSDENLNIWLPYTTVMRRMVGQSYLRSITVRVKDNVDLSVAEQGIT 490
Query: 246 RILGNGVVVIDWQQRY 261
++L D+
Sbjct: 491 QVLTRQHGSQDFFVMN 506
>gi|73669871|ref|YP_305886.1| hypothetical protein Mbar_A2385 [Methanosarcina barkeri str.
Fusaro]
gi|72397033|gb|AAZ71306.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
Length = 387
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 39/254 (15%), Positives = 87/254 (34%), Gaps = 28/254 (11%)
Query: 1 MSIFS---RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDM 57
M I + +A R L + + ++ +G++IGV A+ + + N + +
Sbjct: 1 MKIVKQPGNIYIQLAKRNLERR------VVRTILAAVGIIIGVFAISSMGILGNCLKVSV 54
Query: 58 IKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVL 117
N +V+ + +LD I + VLP S + G +
Sbjct: 55 SNSFEDYNNEIVVYPAGGETSITENQVKQLDKISGIESVLPIYSSGTKIEYKDKSMYGAV 114
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
+ S ++ + G +IG++LA L I +G K+ + V
Sbjct: 115 YGVENEDFTSLVEIDNGKM------LKSSSTGCVIGQELANFLDIKVGGKVTLEDTKLKV 168
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF--NLENAVSGIEVFVKDPD 235
T + + + ++++ + F N + + V K+ D
Sbjct: 169 TGILKKRGMSPDVSV-----------DNSIFVNPEIYNKIFTDNNNDEYDFVIVKAKNVD 217
Query: 236 AIEKTHENIVRILG 249
++ ++ ++L
Sbjct: 218 NVDGVENSVKKMLN 231
>gi|168209552|ref|ZP_02635177.1| putative permease [Clostridium perfringens B str. ATCC 3626]
gi|170712369|gb|EDT24551.1| putative permease [Clostridium perfringens B str. ATCC 3626]
Length = 431
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M F+ + + WR ++ + + + +GV+IG +A+ +++S+ NGF +
Sbjct: 1 MK-FNDL-LSIIWRNMWKRKTR------TIFTMMGVIIGCLAIFIIISITNGFERYLTYE 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIA 84
+ + VI + +
Sbjct: 53 MESLMDTSVISIYPNWKSETEDNK 76
>gi|319893467|ref|YP_004150342.1| Cell division protein FtsX [Staphylococcus pseudintermedius
HKU10-03]
gi|317163163|gb|ADV06706.1| Cell division protein FtsX [Staphylococcus pseudintermedius
HKU10-03]
Length = 391
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
+ V+ R + N++ + IG++IG+ A+I +MS+ NGF++ ++
Sbjct: 8 LHVSLRSIMKNKRRN------IFTMIGIVIGIAAVITIMSLGNGFKKTADEQFSDAG 58
>gi|315280910|ref|ZP_07869677.1| ABC transporter, permease protein [Listeria marthii FSL S4-120]
gi|313615436|gb|EFR88814.1| ABC transporter, permease protein [Listeria marthii FSL S4-120]
Length = 388
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/268 (12%), Positives = 89/268 (33%), Gaps = 20/268 (7%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
MS+F +A + L S + F ++ +G++IGV ++I+++S+ +++ +
Sbjct: 1 MSLFQSV--KLALKQLLSAKFRTF------LTMLGIIIGVFSVILLVSIGEAISKNVATQ 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + ++V Y + +F + + ++ Q S + V G
Sbjct: 53 LGDMGSNLVSVSFYSDNPNDKFTYKDAKSLLNGAEIGSPEVMQTKEVRTSDKTASNQVTG 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
I+ S + + + D + V + + + M
Sbjct: 113 ITEDYASIKNLAVASGRFCSNVDVRYAQKVTVIGSEIAKTYFKNQNPVGKHLQIAGARYM 172
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+G+ + + +++ + A+ F ++V V + + +
Sbjct: 173 VIGVLEEKGDS-------LFGSADEKLFIPITSAERLF-KTDSVDLYYVQTNNTEQVPAV 224
Query: 241 HENIV----RILGNGVVVIDWQQRYQIF 264
+ I ++ N + Q
Sbjct: 225 VKRIEQKMSQLFPNNKDAYTVVNQQQAL 252
>gi|331001286|ref|ZP_08324912.1| efflux ABC transporter, permease protein [Parasutterella
excrementihominis YIT 11859]
gi|329569013|gb|EGG50809.1| efflux ABC transporter, permease protein [Parasutterella
excrementihominis YIT 11859]
Length = 401
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/237 (13%), Positives = 78/237 (32%), Gaps = 9/237 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+++A R F N S ++ +G++IGV A+I +++V NG + + ++ +
Sbjct: 5 ALLLALRQTFRNPMR------SILTVLGIVIGVAAVITMVTVGNGATQQVRDQIASLGSD 58
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
++ + L Q + D + ++G V+ + V+ G + S
Sbjct: 59 SLMIRPGQRLGPGQSVGAPSFKESDAEALATQIAGIKAVAPSRTSTQVVVANGKNWSTSV 118
Query: 128 YLQNSFSRFYGNVSND---FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ N++ + G + + G + +
Sbjct: 119 IGTTNDYFSINNLTIQEGRNFEQSELRAGSAVCVIGQTVKKELFENHDALGKLLRVKGFS 178
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ + + +V + L Q + + I V V+ IE+
Sbjct: 179 CQIIGELEQKGQSGMGMDKDDVVIIPLNTFQRRISGNVRIPLITVAVEPGSDIERVK 235
>gi|187251585|ref|YP_001876067.1| ABC-type efflux carrier [Elusimicrobium minutum Pei191]
gi|186971745|gb|ACC98730.1| ABC-type efflux carrier [Elusimicrobium minutum Pei191]
Length = 412
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/272 (9%), Positives = 84/272 (30%), Gaps = 18/272 (6%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A + +++N+ S ++ +G++IGV A+I + ++ G +D+ RV + + +
Sbjct: 13 IAIKAIWANKMR------SALTSLGIIIGVGAVIAMTAIGAGASKDISDRVAKMGSNTIN 66
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVL-----PFVSGQAFVSGLSSGGSGVLVRGISNSD 125
Q +++ ++ + S + ++
Sbjct: 67 LQAGAASGGGFSFSSQAKYLTTDDVAAIKREIRTIDEVYATITQSKNVTSANTGTMARVM 126
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ + + + + + + + ++P + +
Sbjct: 127 GTTNEIFNVQPWYIAEGRKFTEAEINGAATVCILGSETSKELFADMNPVEQPIRLDGQMY 186
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF----NLENAVSGIEVFVKDPDAIEKTH 241
+ + + + + + L Q N V I + K D I T
Sbjct: 187 KVVGLMKEVGEGSWGFDPDNGIIVPLSTMQTKLGAAANRPKYVQTITIKAKSYDLISDTE 246
Query: 242 ENIVRILGNGVVVIDWQQRY---QIFFSCYES 270
+ + +++ ++ Q+ + +
Sbjct: 247 DEVKKLMRQRHKLLPRQEDDFYIRNLAQMLNT 278
>gi|45358434|ref|NP_987991.1| hypothetical protein MMP0871 [Methanococcus maripaludis S2]
gi|44921192|emb|CAF30427.1| conserved hypothetical membrane protein [Methanococcus maripaludis
S2]
Length = 397
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/251 (14%), Positives = 78/251 (31%), Gaps = 11/251 (4%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M I A R + + +F++I GV+IG++A++ ++S+ G + +
Sbjct: 1 MRITDVVSF--AGRNITQKKTQSFLTII------GVVIGILAIVSLISLGFGVQNYITSE 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ I +V+ N D ++ + V S
Sbjct: 53 ITTIGANVISVLPSQNFGGPAVSKNFNDNDVSAVRNVRGVEEVVAAWFGSYELEYRDQSH 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
N + + +G+ + + +G ++
Sbjct: 113 YGNVLVIEPSKFTHVYSKTWGYEPYKGRWIEDSDKYSCMIGYAL---ATNSFDREIDIGD 169
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ I K Y V+G+ V +S + F + N + + V V+ + +
Sbjct: 170 KITINDKKYKVIGILEETGNPRTENSVILSKDVGEELFEINNEYNMMIVSVRSGEDVNLV 229
Query: 241 HENIVRILGNG 251
E I L +
Sbjct: 230 SEEIKDELEDS 240
>gi|145220193|ref|YP_001130902.1| hypothetical protein Cvib_1389 [Prosthecochloris vibrioformis DSM
265]
gi|145206357|gb|ABP37400.1| protein of unknown function DUF214 [Chlorobium phaeovibrioides DSM
265]
Length = 422
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 45/277 (16%), Positives = 86/277 (31%), Gaps = 30/277 (10%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ A+ +L R+ + ++ +GV +G LI +SV G ++I +V+ + HV
Sbjct: 7 LRFAFVHLRERRRQ------TLLTALGVAVGSAMLITTISVARGSSANVISKVIDTSPHV 60
Query: 69 VIQQKYYPLVDYQFIANRL---------DFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
+++ + I + + PD V+ +G SG S +
Sbjct: 61 LVKADRVTPLVPDNIVPQAGGQVSMVVKNVTPDDEVVIKSYTGVVEAIAGVSGVSRISPF 120
Query: 120 GISNSDFSYLQNSFSRFYGN------------VSNDFDRGKGVIIGKDLARNLGISIGDK 167
S N D +G + + +
Sbjct: 121 VESRVIARNKTRFTPCVLKGVVPELEADIAGLRKNLLDPNAIEELGATPNGMIAGYLLAE 180
Query: 168 INILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSG 226
L V + S T++G F F D ++L AQ + ++VSG
Sbjct: 181 KLHLRYRDRVVLVTKNGEEFSATLVGRFGSGFNVKDEREAIVNLALAQRMEGIASSSVSG 240
Query: 227 IEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQI 263
I + + T + G W + +
Sbjct: 241 IGLSTSRVERAAATAALVQSA--TGYKSESWDETNRN 275
>gi|253577001|ref|ZP_04854324.1| macrolide export ATP-binding/permease macB [Paenibacillus sp. oral
taxon 786 str. D14]
gi|251843611|gb|EES71636.1| macrolide export ATP-binding/permease macB [Paenibacillus sp. oral
taxon 786 str. D14]
Length = 390
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/253 (13%), Positives = 74/253 (29%), Gaps = 14/253 (5%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ + +AW+ + + +F ++ +G++IGV ++I ++SV G + +
Sbjct: 1 MNLLQ--SIKMAWKSIAGAKIRSF------LTMLGIIIGVSSVITLVSVGQGTTSQITDQ 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ G+ ++ + + V G +
Sbjct: 53 LEGLGTDLLTVNIMGRGSSTSLSFEEAMALGKIEGVKAVSPVINGSVTAKKGTVNDSLSV 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ F G D D + + +G + T
Sbjct: 113 EGIAPSYEEVQDFHVQAGRYIIDMDNEFRMKVAL-----IGTEAAETFFGTDNPIGQTIQ 167
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G K +L ++ + + + A+ + V I V V+D IE
Sbjct: 168 LNGSSFKIVGLLESKGSSLTASNDNKLLIPIATAERFLQSRG-VRSITVQVEDTKQIETV 226
Query: 241 HENIVRILGNGVV 253
+ L
Sbjct: 227 KALLEATLDKKFQ 239
>gi|122064311|sp|Q5P6D5|MACB_AZOSE RecName: Full=Macrolide export ATP-binding/permease protein MacB
Length = 641
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/242 (14%), Positives = 87/242 (35%), Gaps = 15/242 (6%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A R L +N + ++ +G++IGV A+I ++++ +G ++D++ R+ + +++
Sbjct: 256 ALRALRAN------IFRAALTLLGIVIGVAAVIAMLAIGDGAKQDVVDRISSMGTNLLTV 309
Query: 72 QKYYPLVDYQFI-----ANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
+ P + + + I D+ VL V Q+ + SG + +
Sbjct: 310 RPGAPNQRGRDTTATLVLDDVRAIRDLPNVLAAVPEQSSTVTIRSGNADHRTSANATGAD 369
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
L ++ G D + GD P G+ + +
Sbjct: 370 FTLARAWPIARGTFFGAADERSYATVAVLGQTVAKALFGD----ADPVGEFVLVNSIMFQ 425
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ + + ++++ L + + + V+D AI+ T +
Sbjct: 426 VLGVMGPQGATPWGTDQDDVIFVPYSTGSLRLFGQRHLRNATIAVEDVAAIDDTQAAVHE 485
Query: 247 IL 248
+L
Sbjct: 486 LL 487
>gi|56476438|ref|YP_158027.1| transmembrane ATP-binding ABC transporter protein [Aromatoleum
aromaticum EbN1]
gi|56312481|emb|CAI07126.1| Transmembrane ATP-binding ABC transporter protein [Aromatoleum
aromaticum EbN1]
Length = 662
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/242 (14%), Positives = 87/242 (35%), Gaps = 15/242 (6%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A R L +N + ++ +G++IGV A+I ++++ +G ++D++ R+ + +++
Sbjct: 277 ALRALRAN------IFRAALTLLGIVIGVAAVIAMLAIGDGAKQDVVDRISSMGTNLLTV 330
Query: 72 QKYYPLVDYQFI-----ANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
+ P + + + I D+ VL V Q+ + SG + +
Sbjct: 331 RPGAPNQRGRDTTATLVLDDVRAIRDLPNVLAAVPEQSSTVTIRSGNADHRTSANATGAD 390
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
L ++ G D + GD P G+ + +
Sbjct: 391 FTLARAWPIARGTFFGAADERSYATVAVLGQTVAKALFGD----ADPVGEFVLVNSIMFQ 446
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ + + ++++ L + + + V+D AI+ T +
Sbjct: 447 VLGVMGPQGATPWGTDQDDVIFVPYSTGSLRLFGQRHLRNATIAVEDVAAIDDTQAAVHE 506
Query: 247 IL 248
+L
Sbjct: 507 LL 508
>gi|238784142|ref|ZP_04628156.1| Macrolide export ATP-binding/permease protein macB [Yersinia
bercovieri ATCC 43970]
gi|238714988|gb|EEQ06986.1| Macrolide export ATP-binding/permease protein macB [Yersinia
bercovieri ATCC 43970]
Length = 646
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/249 (11%), Positives = 75/249 (30%), Gaps = 6/249 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +R AF +S +G++IG+ +++ M+V G R++++ + +
Sbjct: 257 AIKMAWRSLLGHRIRAF------LSMLGIIIGISSVVSSMAVGEGARQEILSEISQLGTS 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + + R DV + + +S + V + +
Sbjct: 311 TLDIRPGLGWDKPRPDLERSLTPADVALLSQQPYVDSLSPVVSKMVTAVRGDKKVMINLA 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ + + + G + + + + + +
Sbjct: 371 GVSSGYFQVEGLNFINGEGFDPGHVSAREPVVVLQPELSDTLFAGGENPIGEIVQLDGIP 430
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ R +M + E + I + V+D + + +
Sbjct: 431 LRVMGVAKRSGMQFGGLLSAWMPYTSLTERISGEMPLESITLRVRDGFELNAAQREVEVL 490
Query: 248 LGNGVVVID 256
L D
Sbjct: 491 LDQAHRQRD 499
>gi|182626567|ref|ZP_02954314.1| putative permease [Clostridium perfringens D str. JGS1721]
gi|177908101|gb|EDT70671.1| putative permease [Clostridium perfringens D str. JGS1721]
Length = 431
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M F+ + + WR ++ + + + +GV+IG +A+ +++S+ NGF +
Sbjct: 1 MK-FNDL-LSIIWRNMWKRKTR------TIFTMMGVIIGCLAIFIIISITNGFERYLTYE 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIA 84
+ + VI + +
Sbjct: 53 MESLMDTSVISIYPNWKSETEDNK 76
>gi|150402046|ref|YP_001329340.1| hypothetical protein MmarC7_0119 [Methanococcus maripaludis C7]
gi|150033076|gb|ABR65189.1| protein of unknown function DUF214 [Methanococcus maripaludis C7]
Length = 397
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/240 (13%), Positives = 81/240 (33%), Gaps = 9/240 (3%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A R + + +F++I GV+IG++A++ ++S+ G + + + I +++
Sbjct: 10 AGRNITQKKTQSFLTII------GVVIGILAIVSLISLGYGVQNYITGEITTIGANIISV 63
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
D D +K + V V S + ++
Sbjct: 64 IPSQNFGGPAVSKTFNDNDVDAVKSVRGVDEVVAVWIGSYELEYRD--QSIYGNILVVEP 121
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTV 191
S + + + ++ KG I + + N D+ +K +
Sbjct: 122 SKFTYVYSTTWGYEPYKGRWIEDSDKYSCMVGYSLATNSFDNDIDIGDKITINGTKYKVI 181
Query: 192 LGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNG 251
+ +S Q F +++ + + V VK + + + E+I + + +
Sbjct: 182 GILEETG-NPATENSAILSKDVGQALFEIDDEYNRMIVSVKSGEDVIRVSEDIQKEVEDS 240
>gi|92116494|ref|YP_576223.1| hypothetical protein Nham_0904 [Nitrobacter hamburgensis X14]
gi|91799388|gb|ABE61763.1| protein of unknown function DUF214 [Nitrobacter hamburgensis X14]
Length = 411
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 35/59 (59%), Gaps = 6/59 (10%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+ +R + +A R L +N+ S ++ +G+++GV A++ ++SV G + ++ +++
Sbjct: 1 MSARESLRIAIRALRANKLR------SALTVLGIIVGVGAVVCMVSVGAGAQAEVSEKI 53
>gi|148264484|ref|YP_001231190.1| hypothetical protein Gura_2438 [Geobacter uraniireducens Rf4]
gi|146397984|gb|ABQ26617.1| protein of unknown function DUF214 [Geobacter uraniireducens Rf4]
Length = 406
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/257 (17%), Positives = 87/257 (33%), Gaps = 15/257 (5%)
Query: 12 AWRYLFSNRKNAFISI-ASFISFIGVMI-GVMALIVVMSVM------NGFREDMIKRVLG 63
A + + NR+ + I++ + + GV++ G AL S+ NG K
Sbjct: 7 ACKNVLRNRRRSLITVLIAAVGTAGVLVGGGFALFTYESLREMAARENGHLTLAHKSYFE 66
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ +Q + RL+ V LP V +S S + G+
Sbjct: 67 SDEDTPMQYGLADFTALKS---RLEQDKRVRMALPRVQFSGLLSNG-DKSSVFVGMGVDP 122
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ Y + R + + G L L + + T G
Sbjct: 123 AGEFYAKGPAMRVVSGSTLSRGQKTGAAPEIMLGTELARQMKAAPGAVLTLLSTTTSGSL 182
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
V G+ + P+ D ++Y+ + AQ + + VS + V++ + ++ +
Sbjct: 183 NVL-DVVVRGIMTVGVPEIDKRLIYVDVPTAQRLL-VTDKVSTLSVYLHETAQTDEMRKE 240
Query: 244 IVRILGNGVVVIDWQQR 260
I +L V W+ +
Sbjct: 241 IAAMLPQ-YSVQTWRDQ 256
>gi|149922453|ref|ZP_01910886.1| hypothetical protein PPSIR1_07723 [Plesiocystis pacifica SIR-1]
gi|149816733|gb|EDM76224.1| hypothetical protein PPSIR1_07723 [Plesiocystis pacifica SIR-1]
Length = 411
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/263 (16%), Positives = 86/263 (32%), Gaps = 26/263 (9%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+AWR L+ N + I++ S + GV+ +V + + +MI + G V+
Sbjct: 1 MAWRNLWRNGRRTAITLFS------IAFGVLLAVVSTGIGDSSYTEMIDYAARLGGGHVV 54
Query: 71 QQKYYPLVDYQFIANRLDFIP--------------DVIKVLPFVSGQAFVSGLSSGGSGV 116
Q + + V+ V P ++G ++ S+
Sbjct: 55 VQHPDYVDQPSLENSIRVSPEALEAELDTLDKGRARVVGVAPRITGGIMLATSSNNVGAG 114
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
+V ++ KG+I+G LA NL + +G K+ +
Sbjct: 115 VVAIDPRAESETTLGLVEALSEGEMFAGPDDKGIILGAVLAENLDVELGKKVVYTVTDKN 174
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPD 235
V G+ P+ D M + + E + ++ + VF+ D
Sbjct: 175 GEIANGL-----ARVSGIIETGAPEIDGATCLMPIGAMREVLGYEDDELTQLAVFIDDHH 229
Query: 236 AIEKTHENIVRILGNGVVVIDWQ 258
+ + LG V + W
Sbjct: 230 HADALATQLDAALGESVSALPWS 252
>gi|168700214|ref|ZP_02732491.1| probable lipoprotein releasing system transmembrane protein LolC
[Gemmata obscuriglobus UQM 2246]
Length = 492
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 35/87 (40%), Gaps = 2/87 (2%)
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK-THE 242
S+ V + +YD VY+ L++ Q + + +V +K+ D ++ +
Sbjct: 257 PVWGSFIVTDYLKTEMSEYDQSFVYVPLEQLQHIRGMIGRATAFQVKLKNYDRDKELVTQ 316
Query: 243 NIVRILGN-GVVVIDWQQRYQIFFSCY 268
+ ++ + V V W++ S
Sbjct: 317 ELRKVFPHADVRVATWEEHQGPLLSAI 343
Score = 45.5 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+++++ RYL + +FI + VM+GV LIVV +VM+GF + R+ G+
Sbjct: 2 YKLLLCVRYLQTR-------YLAFICIVSVMLGVATLIVVNAVMSGFGTKLKDRLHGVLS 54
Query: 67 HVV 69
VV
Sbjct: 55 DVV 57
>gi|88602052|ref|YP_502230.1| hypothetical protein Mhun_0759 [Methanospirillum hungatei JF-1]
gi|88187514|gb|ABD40511.1| protein of unknown function DUF214 [Methanospirillum hungatei JF-1]
Length = 401
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/263 (12%), Positives = 81/263 (30%), Gaps = 10/263 (3%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + R +A R + + + +++ + + + +I + S++ GF + +
Sbjct: 1 MLLDLRVSFFLALRGILRGSRGSL-----YLTVLIIAMVFTNMIFMPSIILGFIKVAEDQ 55
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSG--VLV 118
++ ++ + + + + + L+ I + VL + L G+ V
Sbjct: 56 IITYQTGNILISPHEDELYIEDVFSLLEKINRIPGVLRASAHYGTGVTLRYKGNSLGSTV 115
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGIS-IGDKINILSPYGDV 177
I D + + + + +IIG + + S GD
Sbjct: 116 VAIKPDDERLVTDVYRKMADGDYLADGENDEIIIGIQTSGHKDESLDMGPTLGYLKAGDP 175
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDA 236
+ + Y + Y++ E + F + + + + +
Sbjct: 176 VTVEYTNGVSKVYHVKGIIETGSYYADQGAYITWDELESVFGRKVDYATDVIIKTDPDSY 235
Query: 237 IEKTHENIVRILGNGVVVIDWQQ 259
I R G V WQ
Sbjct: 236 EPDVKTQIYR-FGIREKVQTWQD 257
>gi|298504791|gb|ADI83514.1| ABC transporter, membrane protein, putative [Geobacter
sulfurreducens KN400]
Length = 387
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/240 (12%), Positives = 70/240 (29%), Gaps = 15/240 (6%)
Query: 14 RYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQK 73
+ + R + +G+ IG+ + + +++ G ++++ + + ++V+
Sbjct: 9 KNITRRRGRF------VFTLLGITIGIASFVAFLALGGGLKDEVRREAAALGANLVVTPN 62
Query: 74 YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSF 133
+ L + G+ + + + + +
Sbjct: 63 GSCAY---EQVSILTGEQLPSTITMEEVGRVAAIQGLTAVPVLTEKTAIRNRPVGVAGVL 119
Query: 134 SRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLG 193
R D + + + L P +VT G + K
Sbjct: 120 PDAMKPFKGWEVRSGEYFANNDERVVVVGAAAAESFGLKPGDEVTIRGTRLPVKGVLK-- 177
Query: 194 MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVV 253
D+ ++++L AQ F S + V V D + I + GVV
Sbjct: 178 ----ETGSKDDTTLFLALSVAQELFKAAGKASFVAVKVDDLSRTDDYIMKIKETVNAGVV 233
>gi|229550485|ref|ZP_04439210.1| conserved hypothetical protein [Enterococcus faecalis ATCC 29200]
gi|229304388|gb|EEN70384.1| conserved hypothetical protein [Enterococcus faecalis ATCC 29200]
Length = 114
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 35/60 (58%), Gaps = 6/60 (10%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ A+R + N++ S ++ +G++IG+ ++I ++++ NGF+EDM+ ++
Sbjct: 1 MKRSIIWKTAFRSILKNKRR------SLLTMLGIVIGIASVITIVAIGNGFKEDMVDKLS 54
>gi|313620604|gb|EFR91926.1| ABC transporter, permease protein [Listeria innocua FSL S4-378]
Length = 239
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/250 (10%), Positives = 87/250 (34%), Gaps = 16/250 (6%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M+IF + +A + L S + F ++ +G++IGV ++I+++S+ +++ +
Sbjct: 5 MNIFQ--SIKLALKQLLSAKFRTF------LTMLGIIIGVFSVILLVSIGEAISKNVSSQ 56
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + ++V Y + +F + + + ++ + + + V G
Sbjct: 57 LGDMGSNLVSVSFYSDNPNEKFTYKEANGLLNEDEIGSPEVMKTKEVRTNVKTASSQVTG 116
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
++ + + + D + V + + + +
Sbjct: 117 VNEDYATIKNLELTSGRFCSNVDVRFAQKVTVIGSEIAKTYFKNQNPVGKHIQIAGARYL 176
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+G+ + + +++ + A+ F ++V + K+ + +
Sbjct: 177 VIGVLKEKGES-------LFGSADKKIFIPVTSAERLF-KTDSVDLYYIQTKNTEQVPDV 228
Query: 241 HENIVRILGN 250
+ + L
Sbjct: 229 VKRTKQQLSQ 238
>gi|162455511|ref|YP_001617878.1| hypothetical protein sce7229 [Sorangium cellulosum 'So ce 56']
gi|161166093|emb|CAN97398.1| hypothetical protein sce7229 [Sorangium cellulosum 'So ce 56']
Length = 410
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/270 (12%), Positives = 82/270 (30%), Gaps = 17/270 (6%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A R + N+ + ++ +G+ IGV A++ V ++ +G R ++ ++ + + +I
Sbjct: 14 IALRAVRRNKLR------AGLTILGITIGVAAVVTVTALASGARANVNAQISNLGSNSLI 67
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
+ L S + S ++ N+ + +
Sbjct: 68 VFARSARASGVRSTAGARLSELDGQALARESTSIRLVAPFLRSSAQVIHEGQNASPTLVG 127
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN----ILSPYGDVTPMGMGIRS 186
+ F ++L+ + + L P G + +G +
Sbjct: 128 TRLNYFEIRSWKVAQGEPWSPASENLSEKVVVIGAQTARDLFGSLDPVGRMVRIGRQMYR 187
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQL--YFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ F + +V M + + V I + + E+ +
Sbjct: 188 VLGVLEEKGASPFGQSQDEIVLMPITTMRSHVMATRPGEVHAILLSSTSAETSERARQQA 247
Query: 245 VRILGNGVVV-----IDWQQRYQIFFSCYE 269
IL + D+ R Q F +
Sbjct: 248 EAILRQRHRIGENDEDDFAVRSQAEFQAMQ 277
>gi|110801318|ref|YP_695647.1| putative permease [Clostridium perfringens ATCC 13124]
gi|168213956|ref|ZP_02639581.1| putative permease [Clostridium perfringens CPE str. F4969]
gi|110675965|gb|ABG84952.1| putative permease [Clostridium perfringens ATCC 13124]
gi|170714554|gb|EDT26736.1| putative permease [Clostridium perfringens CPE str. F4969]
Length = 431
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M F+ + + WR ++ + + + +GV+IG +A+ +++S+ NGF +
Sbjct: 1 MK-FNDL-LSIIWRNMWKRKTR------TIFTMMGVIIGCLAIFIIISITNGFERYLTYE 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIA 84
+ + VI + +
Sbjct: 53 MESLMDTSVISIYPNWKSETEDNK 76
>gi|217967228|ref|YP_002352734.1| protein of unknown function DUF214 [Dictyoglomus turgidum DSM 6724]
gi|217336327|gb|ACK42120.1| protein of unknown function DUF214 [Dictyoglomus turgidum DSM 6724]
Length = 405
Score = 50.2 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/261 (14%), Positives = 85/261 (32%), Gaps = 14/261 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV- 61
+F + +A +N+ F ++ +G++IGV A++ +MS+ G + + K+
Sbjct: 1 MFLEI-IKMALHSFSTNKLRTF------LTTLGIIIGVAAVVTLMSLGEGTKATIEKQFT 53
Query: 62 -LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
LG N V + + + D + + V+ + V V+
Sbjct: 54 SLGSNLLTVFPRFGRGIGLVRGAPRSSITNDDYEALSKELDPNKVVAIVPYSSRNVQVKY 113
Query: 121 ISNSDFSYLQNSFSRFYGNV-----SNDFDRGKGVIIGKDLARNLGISIGDKINILSPYG 175
S + + + + + + F + K +A P G
Sbjct: 114 KSENTNTQVIGTSPDYLKVREVKVANGSFFSEEEYKASKKVAVLGASVAETLFGNDDPIG 173
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD 235
+ + ++ + M+++ L Q N+++ I + PD
Sbjct: 174 QSIKIAGVTFKVVGVLEPQGQLGGFANLDDMIFIPLTTFQRKIQGGNSLNNIYISAISPD 233
Query: 236 AIEKTHENIVRILGNGVVVID 256
+ I IL + D
Sbjct: 234 VMNDLQSQIEDILRKRHKITD 254
>gi|94497414|ref|ZP_01303984.1| hypothetical protein SKA58_07665 [Sphingomonas sp. SKA58]
gi|94423045|gb|EAT08076.1| hypothetical protein SKA58_07665 [Sphingomonas sp. SKA58]
Length = 401
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/260 (11%), Positives = 84/260 (32%), Gaps = 11/260 (4%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A+R + ++ +F ++ +G++IGV A++ ++++ NG + +++ + +V+
Sbjct: 8 LAFRAINRHKLRSF------LTTLGIIIGVAAVVTMVTLGNGATAAVREQISSLGANVLQ 61
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
+ DF + + SG + + + + +
Sbjct: 62 LRPGQGFGRGGGGPRPPDFKEADLTAIENQLTGVRAVAPLVQSSGTAIYEGN-NWSTTVY 120
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
+ S + G+ + ++ A IG+ + +
Sbjct: 121 GTTSAYSEVQQWKVADGRLFMPEEEEAGKPVCVIGNTVRTNLFQNNDPLGKRMRIKGVSC 180
Query: 191 VLGMFRMRF----PDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ + +V M ++ Q F + VS I V V D ++
Sbjct: 181 QVIGVLSTRGQGGFGDQDDVVVMPIRFVQRRFTGDRDVSQIMVAVDDAYDTSTVQTSLEE 240
Query: 247 ILGNGVVVIDWQQRYQIFFS 266
++ + + F
Sbjct: 241 LMRERRKIKPGAEDNFNVFD 260
>gi|120436738|ref|YP_862424.1| lipoprotein releasing system transmembrane protein [Gramella
forsetii KT0803]
gi|117578888|emb|CAL67357.1| lipoprotein releasing system transmembrane protein [Gramella
forsetii KT0803]
Length = 410
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 38/269 (14%), Positives = 85/269 (31%), Gaps = 5/269 (1%)
Query: 5 SRFEVIVAWRYLFSNR-KNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FE V R + + + K++ + I+ + IGV+ ++V + G +E + ++
Sbjct: 1 MNFEYFVVKRLISAKKYKSSISAPIIKIAITAIAIGVIVMLVAFAAGLGLQEKIRDKIAA 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAF---VSGLSSGGSGVLVRG 120
NGH+ I I +
Sbjct: 61 FNGHINISSYDNNSSKVSLIPVSKEQEFYPEFTSVDGIKHIQAVATKFGVIRTEEDFEGI 120
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
I + + D + + +++ L + K+ P +
Sbjct: 121 IVKGVGDDYNWEYFEEFLIDGKLPDFTENLNDEILISQYLANRLQLKVGDRVPTYFLRED 180
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN-AVSGIEVFVKDPDAIEK 239
++ + + G++ F ++D + ++ Q E+ V EVFV D D +++
Sbjct: 181 SERPLARGFEITGIYDSGFQEFDELYLIADIRHIQRINKWEDDQVGNFEVFVNDFDELDQ 240
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCY 268
+ G+ + Q+Y F
Sbjct: 241 KGNEVYENTGSFLDTQTISQKYYSMFEWL 269
>gi|322517231|ref|ZP_08070110.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Streptococcus vestibularis ATCC 49124]
gi|322124137|gb|EFX95671.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Streptococcus vestibularis ATCC 49124]
Length = 402
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/250 (12%), Positives = 69/250 (27%), Gaps = 17/250 (6%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A + S++ +F ++ +G++IGV A++++M + NG R+ + V G V
Sbjct: 4 WKFALSSIRSHKMRSF------LTMLGIIIGVAAVVLIMGLGNGMRQSVTDSVTGDKDTV 57
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + A+ V +V + S + L IS +
Sbjct: 58 QVYYEAKGEELDPAYADLSQPTKPVKEVWLEQVARQTPGIDSYFVTNSLTSSISLQKKTV 117
Query: 129 LQNSFSRFYGNVS----------NDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
+ + + + + ++ V
Sbjct: 118 KNVNITGASQGYFKAKKLEMLTGRSLKDNDYKNFSRVIVIDQMVAKKLFRTNEDALNQVV 177
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+G + G ++ N + + I V D
Sbjct: 178 TIGNNDYRVIGVYKNKDTAIGASGEIGTALVA-NTQLAAENNTDPIGQIFFHVTDVKNSS 236
Query: 239 KTHENIVRIL 248
++ + L
Sbjct: 237 SVAKDAAKRL 246
>gi|312864265|ref|ZP_07724499.1| putative macrolide export ATP-binding/permease protein MacB
[Streptococcus vestibularis F0396]
gi|311100266|gb|EFQ58475.1| putative macrolide export ATP-binding/permease protein MacB
[Streptococcus vestibularis F0396]
Length = 402
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/250 (12%), Positives = 69/250 (27%), Gaps = 17/250 (6%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A + S++ +F ++ +G++IGV A++++M + NG R+ + V G V
Sbjct: 4 WKFALSSIRSHKMRSF------LTMLGIIIGVAAVVLIMGLGNGMRQSVTDSVTGDKDTV 57
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + A+ V +V + S + L IS +
Sbjct: 58 QVYYEAKGEELDPAYADLSQPTKPVKEVWLEQVARQTPGIDSYFVTNSLTSSISLQKKTV 117
Query: 129 LQNSFSRFYGNVS----------NDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
+ + + + + ++ V
Sbjct: 118 KNVNITGASQGYFKAKKLEMLTGRSLKDNDYKNFSRVIVIDQMVAKKLFRTNEDALNQVV 177
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+G + G ++ N + + I V D
Sbjct: 178 TIGNNDYRVIGVYKNKDTAIGASGEIGTALVA-NTQLAAENNTDPIGQIFFHVTDVKNSS 236
Query: 239 KTHENIVRIL 248
++ + L
Sbjct: 237 SVAKDAAKRL 246
>gi|289648596|ref|ZP_06479939.1| macrolide efflux ABC transporter, ATP-binding/permease protein
[Pseudomonas syringae pv. aesculi str. 2250]
Length = 656
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/243 (15%), Positives = 89/243 (36%), Gaps = 18/243 (7%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +++
Sbjct: 272 AWRVMWINR------FRTELTLLGIVIGVASVVVMLAVGEGSKRQVMAQMSSFGSNIIYL 325
Query: 72 QKYYPLVDYQFIANRLD------FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
P L+ +P+V ++P GQA V + S + ++
Sbjct: 326 NGKAPNPRAPKGIITLEEVAALGELPEVKMIMPVNGGQAGVRYGNVDHSSYVGGNDTHFP 385
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ Y + +++ +IG + + L D I +V +G+
Sbjct: 386 AIFNWPVVEGSYFSEADEQSAAAVAVIGYKVRQKLFGEHTDPIGQYILIENVPFQVVGVL 445
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ G + F ++ I + +D + ++ E I
Sbjct: 446 EEKGATSGDLDSDNRIAIPYSA-----ASIRLFGSQDPE-YITIATRDANNVKHAEEAIR 499
Query: 246 RIL 248
+L
Sbjct: 500 NLL 502
>gi|224023802|ref|ZP_03642168.1| hypothetical protein BACCOPRO_00518 [Bacteroides coprophilus DSM
18228]
gi|224017024|gb|EEF75036.1| hypothetical protein BACCOPRO_00518 [Bacteroides coprophilus DSM
18228]
Length = 406
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A R L +N+ AF ++ +G++IGV ++I ++++ G + + K++ + ++
Sbjct: 7 FKIALRALANNKMRAF------LTMLGIIIGVASVIAMLAIGQGSKRSIQKQISEMGSNM 60
Query: 69 VIQQK 73
++
Sbjct: 61 IMIHP 65
>gi|305665075|ref|YP_003861362.1| ABC transporter permease [Maribacter sp. HTCC2170]
gi|88709827|gb|EAR02059.1| ABC transporter permease protein [Maribacter sp. HTCC2170]
Length = 412
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 40/273 (14%), Positives = 96/273 (35%), Gaps = 12/273 (4%)
Query: 5 SRFEVIVAWRYLF-SNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
E +A R + + K + + I+ + I V +++ ++ G + + ++V
Sbjct: 1 MNLEYFIAKRLIKGAAHKISISAPIIKIAIAAIAISVFMMLIAIATGVGLKHKIREKVAA 60
Query: 64 INGHVVIQQKYYP-------LVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
NGH+ I V + I + + + V+ +A + G
Sbjct: 61 FNGHIQIYNYDNNTSDVSVVPVSKEQEFYPNFNIVEGVDHIQAVASKAGIIRTEDTFEGF 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
+ +G+ + + D V++ + +A L + GD + P +
Sbjct: 121 IAKGVGKDYNWKVFEEYLVVGELPDYSGDLNTEVVLSQLMANRLQLKTGDSFSAFFPKEE 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPD 235
+ + ++G++ F + D ++ ++ Q E + V EVF+ D
Sbjct: 181 DPLK---PNQRRFKLVGIYDSGFEEIDGVFAFVDIRHVQRMNKWEQDQVGNFEVFLNGYD 237
Query: 236 AIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
I++ + I + + + +Y F
Sbjct: 238 DIDQISQEIYGKILSNLDTQTVVNKYYKIFEWI 270
>gi|209549304|ref|YP_002281221.1| hypothetical protein Rleg2_1708 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209535060|gb|ACI54995.1| protein of unknown function DUF214 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 400
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 39/256 (15%), Positives = 90/256 (35%), Gaps = 11/256 (4%)
Query: 3 IFSRFE-VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+F FE + +A R + N +F ++ +GV+IGV A+I ++++ NG + +
Sbjct: 1 MF--FETLKLALRAISRNMLRSF------LTVLGVVIGVAAVIALVTIGNGTTAQVSTEL 52
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ +++ + + + DV + + G V+ L+ + V+ G
Sbjct: 53 SRLGTNMLFVRPGQFGPGRASSEAKRFSVKDVAAIRDQIGGLRAVAPLNQSTATVISGGQ 112
Query: 122 SNSDFSY--LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
++S + F N++ G+ P G
Sbjct: 113 NHSTSVSGTTNDYFVAQDWNLALGRTFTLAEERGQSRCIIGETVRSQLFGAADPTGQQIR 172
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+G + + + +V M ++ Q + + V I + +D + K
Sbjct: 173 VGKVSCPVIGVLAKRGQSGMGTDQDDVVIMPVKVFQRRISGNSNVPQIIISARDGVSTAK 232
Query: 240 THENIVRILGNGVVVI 255
++ +L +I
Sbjct: 233 VQSDVEDLLRERRKII 248
>gi|153837368|ref|ZP_01990035.1| efflux ABC transporter, permease protein [Vibrio parahaemolyticus
AQ3810]
gi|149749283|gb|EDM60062.1| efflux ABC transporter, permease protein [Vibrio parahaemolyticus
AQ3810]
Length = 411
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 41/272 (15%), Positives = 91/272 (33%), Gaps = 30/272 (11%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +AWR L+ N+ + I ++ G+M ++ ++ MNG + MIK +
Sbjct: 3 IKLAWRNLWRNKLR------TSIMLGAMVFGLMGVVAMIGFMNGLVDSMIKNAIAWQTSH 56
Query: 69 VIQQKYYPLVDYQFIANRLDFIP--------DVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + LV+ + D +K + + + G+ + G
Sbjct: 57 LQIHQSAYLVNPELKDTIPDSQSIVTTLDKHQSVKAVSERFLADGMIASARSSRGIRING 116
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
I + D + +++ + A+ L + +G K+ + +
Sbjct: 117 IHLEQEQKITPLSEHIIDGYWLDEEGRNPILVSQKTAKRLKLRVGSKVILTLSDINGDVS 176
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G R K F+ +D+G VY+ + + + I + + +
Sbjct: 177 GAAFRVKGI-----FKTPSTTFDDGNVYVRKADLEKIAGIAG-AHEIAILLN--ANDDDV 228
Query: 241 HENIVRIL--------GNGVVVIDWQQRYQIF 264
+NIV G + V W + +
Sbjct: 229 LQNIVSFTRTLTDDGSGKPLTVRTWLEIQPLL 260
>gi|317152257|ref|YP_004120305.1| hypothetical protein Daes_0539 [Desulfovibrio aespoeensis Aspo-2]
gi|316942508|gb|ADU61559.1| protein of unknown function DUF214 [Desulfovibrio aespoeensis
Aspo-2]
Length = 416
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/252 (9%), Positives = 71/252 (28%), Gaps = 17/252 (6%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A R L ++ + ++ + +++GV +++ + F+ MI + +
Sbjct: 5 LKIALRNLTRYKRR------TALTSLLIVLGVALVVIFSGLAGSFKSMMIGIITDSSLGH 58
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ K + ++ + + + Q + + + +
Sbjct: 59 MQIHKRGYVSSIDTTPLNMNLKAKGYQQMADILDQTEGVAAYAPRLKFGAVLSNYLESTN 118
Query: 129 LQNSFSRFYGNVSND-----FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
++ S V+ L R + L + + +
Sbjct: 119 IRLSAIDPEKEVAVCTALPGRIAEGAAPGEPLLGRGQVVIPQKVATSLKMKPGDSVVLVA 178
Query: 184 IRSKSYTVLGMFRM-----RFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAI 237
F + YM +++A+ V+ I + + D +
Sbjct: 179 TNKDGSVNGMEFEVAGIIEDIMGPGGKDAYMHIEDARSLLRTEPGEVTEIVIRAESFDKL 238
Query: 238 EKTHENIVRILG 249
+ + R +
Sbjct: 239 DALAARLTRQID 250
>gi|194014519|ref|ZP_03053136.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Bacillus pumilus ATCC 7061]
gi|194013545|gb|EDW23110.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Bacillus pumilus ATCC 7061]
Length = 397
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/259 (11%), Positives = 78/259 (30%), Gaps = 12/259 (4%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M +F +A + +++ S ++ +G++IGV ++I V+++ G + +
Sbjct: 1 MKLFENI--KIAMNSVLAHKLR------SILTMLGIIIGVGSVIAVVAIGQGGEQMLKGS 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ G N V + D + + SS G+ +R
Sbjct: 53 ISGPNNTVDMTYTPSDEELNANPNALFDATFTEEDIKSIKTINGVNQVASSTAQGMQLRF 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLG---ISIGDKINILSPYGDV 177
+ + + + S G+ + + K
Sbjct: 113 QDTTVDATVNGINEGYTNVHSLQIAEGQNLRDIDFKSGRRAALISEGLQKELFNGQKALG 172
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
+ M + + + +D +Y+ F + N + + V D +
Sbjct: 173 EMIWMNGQPVEVIGVLAKQKGMLSFDMNEIYVPFAMLTSTFGI-NEYDKLSIQVAHADQM 231
Query: 238 EKTHENIVRILGNGVVVID 256
++ ++ +L D
Sbjct: 232 KEVGKSAAALLNENHHTED 250
>gi|91772722|ref|YP_565414.1| hypothetical protein Mbur_0699 [Methanococcoides burtonii DSM 6242]
gi|91711737|gb|ABE51664.1| protein of unknown function DUF214 [Methanococcoides burtonii DSM
6242]
Length = 404
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/249 (11%), Positives = 79/249 (31%), Gaps = 7/249 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A+ +FS++ S ++ +G++IGV A+I +S+ F + + + I +
Sbjct: 7 SLEIAFGSIFSSKLR------STLTTLGIVIGVAAVIANVSLGASFNQYFDEEIGTIGSN 60
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ P + + P V++ P A V+ +S + + D
Sbjct: 61 FIYVSANEPNTFFDNELEVVRKTPGVLRASPINEQVAEVTYMSDSRRVSITGVTGDYDEV 120
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ ++ + G + +D +
Sbjct: 121 ANIGLSEGNFIKDNDQYVAVIGYDVSEDTFDRKLSNKNSIEINFRTRDGEEITQTFQVKG 180
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ + +++ + ++ + S I + + + +T I +
Sbjct: 181 IVQKSEPSFISGGMVPDKRIFIPIPTMNEILSVSD-YSTIFAEGESIETVTETSGEIDKR 239
Query: 248 LGNGVVVID 256
LG + +
Sbjct: 240 LGRYMGISS 248
>gi|292670314|ref|ZP_06603740.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Selenomonas noxia ATCC 43541]
gi|292648045|gb|EFF66017.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Selenomonas noxia ATCC 43541]
Length = 404
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/245 (13%), Positives = 78/245 (31%), Gaps = 11/245 (4%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
L +N+ S ++ +G++IGV A+I ++S+ G R + + +++I
Sbjct: 14 LLANKLR------SLLTMLGIIIGVGAVIAMVSIGMGVRTSVADSFASLGSNMLIIMPGS 67
Query: 76 PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSR 135
A S + +S S N +++ +
Sbjct: 68 TNHGGVRGAAGSRKSLKYDDAKAIESKIKGIDYVSPTVSSSYQVVNGNLNWNTSVEGVTP 127
Query: 136 FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMF 195
+ I D+ + +++ + +G P+G IR + +
Sbjct: 128 ELMQIRALKVENGSFISASDMNKRSRVAVIGPTVAANLFGAENPVGQNIRINNQPFKVIG 187
Query: 196 RMRFPDYDNGM-----VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN 250
G +Y+ L AQ + + + V P+ +++ I +L
Sbjct: 188 ITASKGQSIGQDQDDVIYIPLTTAQERMLAITHIHSVNIQVSSPEKMDQVQAEIENLLRQ 247
Query: 251 GVVVI 255
+
Sbjct: 248 RHHIR 252
>gi|39995783|ref|NP_951734.1| ABC transporter permease [Geobacter sulfurreducens PCA]
gi|39982547|gb|AAR34007.1| ABC transporter, permease protein, putative [Geobacter
sulfurreducens PCA]
Length = 387
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/240 (12%), Positives = 71/240 (29%), Gaps = 15/240 (6%)
Query: 14 RYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQK 73
+ + R + +G+ IG+ + + +++ G ++++ + + ++V+ K
Sbjct: 9 KNITRRRGRF------VFTLLGITIGIASFVAFLALGGGLKDEVRREAAALGANLVVTPK 62
Query: 74 YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSF 133
+ L + G+ + + + + +
Sbjct: 63 GSCAY---EQVSILTGEQLPSTITMEEVGRVAAIQGLTAVPVLTEKTAIRNRPVGVAGVL 119
Query: 134 SRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLG 193
R D + + + L P +VT G + K
Sbjct: 120 PDAMKPFKGWEVRSGEYFANNDERVVVVGAAAAESFGLKPGDEVTIRGTRLPVKGVLK-- 177
Query: 194 MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVV 253
D+ ++++L AQ F S + V V D + I + GVV
Sbjct: 178 ----ETGSKDDTTLFLALSVAQELFKAAGKASFVAVKVDDLSRTDDYIMKIKETVNAGVV 233
>gi|224368741|ref|YP_002602902.1| ABC-type transporter, permease component [Desulfobacterium
autotrophicum HRM2]
gi|223691457|gb|ACN14740.1| ABC-type transporter, permease component [Desulfobacterium
autotrophicum HRM2]
Length = 401
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/236 (13%), Positives = 82/236 (34%), Gaps = 9/236 (3%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+++A R + N S+ S ++ +G++IGV A+I ++++ G + + + ++
Sbjct: 6 ILLALRAIRRN------SLRSLLTILGIVIGVAAVITMVTLGKGATLQVTSDISKLGSNM 59
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
++ + + A DV + +S A V+ +S + + S
Sbjct: 60 LMVRPGQDVRGGAHEAAPSFDYKDVAAIARDISSVAAVAPTASKNLQAIYGSENWSTSVI 119
Query: 129 LQNSFSRFYGNVSND---FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
++ F N + + G + + + P +
Sbjct: 120 GTDNNYFFVRNWEIETGRRFTDNEMKSGTAVCLLGATVYKEIFGSMDPLETSIRLQKLSC 179
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
T+ + F + +V + L+ Q + + I + +D + EK
Sbjct: 180 KIIGTLKSKGQSSFGSDQDDIVLIPLRTFQRRISGNRDIDAIYLSARDSLSTEKAK 235
>gi|28900414|ref|NP_800069.1| hypothetical protein VPA0559 [Vibrio parahaemolyticus RIMD 2210633]
gi|260362056|ref|ZP_05775052.1| ABC transporter, permease protein [Vibrio parahaemolyticus K5030]
gi|308094523|ref|ZP_05889720.2| ABC transporter, permease protein [Vibrio parahaemolyticus AN-5034]
gi|308095574|ref|ZP_05906898.2| ABC transporter, permease protein [Vibrio parahaemolyticus
Peru-466]
gi|28808725|dbj|BAC61902.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|308085094|gb|EFO34789.1| ABC transporter, permease protein [Vibrio parahaemolyticus
Peru-466]
gi|308090797|gb|EFO40492.1| ABC transporter, permease protein [Vibrio parahaemolyticus AN-5034]
gi|308113812|gb|EFO51352.1| ABC transporter, permease protein [Vibrio parahaemolyticus K5030]
Length = 411
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 41/272 (15%), Positives = 91/272 (33%), Gaps = 30/272 (11%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +AWR L+ N+ + I ++ G+M ++ ++ MNG + MIK +
Sbjct: 3 IKLAWRNLWRNKLR------TSIMLGAMVFGLMGVVTMIGFMNGLVDSMIKNAIAWQTSH 56
Query: 69 VIQQKYYPLVDYQFIANRLDFIP--------DVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + LV+ + D +K + + + G+ + G
Sbjct: 57 LQIHQSAYLVNPELKDTIPDSQSIVTTLDKHQSVKAVSERFLADGMIASARSSRGIRING 116
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
I + D + +++ + A+ L + +G K+ + +
Sbjct: 117 IHLEQEQKITPLSEHIIDGYWLDEEGRNPILVSQKTAKRLKLRVGSKVILTLSDINGDVS 176
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G R K F+ +D+G VY+ + + + I + + +
Sbjct: 177 GAAFRVKGI-----FKTPSTTFDDGNVYVRKADLEKIAGIAG-AHEIAILLN--ANDDDV 228
Query: 241 HENIVRIL--------GNGVVVIDWQQRYQIF 264
+NIV G + V W + +
Sbjct: 229 LQNIVSFTRTLTDDGSGKPLTVRTWLEIQPLL 260
>gi|261749540|ref|YP_003257226.1| putative ABC transporter permease [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497633|gb|ACX84083.1| putative ABC transporter, permease component [Blattabacterium sp.
(Periplaneta americana) str. BPLAN]
Length = 410
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 42/269 (15%), Positives = 96/269 (35%), Gaps = 6/269 (2%)
Query: 5 SRFEVIVAWRYLFSN-RKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FE + + ++ + RK + ++ ++ V+ I+ SV GF++ + ++ L
Sbjct: 1 MNFEWFFSRKTIWKDCRKKKILRTIVLVTQSTIVFSVIISILTFSVGFGFKKVINQKFLN 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
I G +++ + + + F+ + + + S + + S G V
Sbjct: 61 IQGPIIVVNNPKKETCFLSLEKKNLFLFNSVSFVYPFSEKEVIVCKSEGKKDVDRFVFKG 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
F + + + + I + + + +IL + +
Sbjct: 121 -ISKDYNPVFFKNFLVSGSKKNLFSRSEILLSKKISNLLKLNKGSSILIGFISIKNGKPF 179
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVK--DPDAIEKT 240
+ K + V G++ P++DN + ++ Q EN V G E+F+ D +E
Sbjct: 180 VFYKQFYVCGLYDTGIPEFDNVYLIGDMKHIQSINGWKENFVEGFEIFISSLDSKRMESI 239
Query: 241 HENIVRILGNGVVVIDWQ-QRYQIFFSCY 268
+ I R + +V Q Q
Sbjct: 240 KKEIDRKYSDKFLVKTIYNQYNQDIIEWL 268
>gi|71280603|ref|YP_271680.1| ABC transporter permease, putative [Colwellia psychrerythraea 34H]
gi|71146343|gb|AAZ26816.1| ABC transporter, permease protein, putative [Colwellia
psychrerythraea 34H]
Length = 415
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/275 (10%), Positives = 76/275 (27%), Gaps = 20/275 (7%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A+R + NR+ S+ + +S G G L + +S+ G ++I + V
Sbjct: 5 KLAFRNILRNRRR---SLLTLLSMGG---GFFLLCLTLSMSEGSYSNIINIFTQDHTGHV 58
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFV--------SGQAFVSGLSSGGSGVLVRGI 121
K L + + ++ + V GI
Sbjct: 59 QIHKENYLERPSLYKTINHADEIITLLEQKTLVLGVAPRIYSPSLAYGKNKTFPAQVIGI 118
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVI--IGKDLARNLGISIGDKINILSPYGDVTP 179
+ ++ + ++ ++ + ++
Sbjct: 119 DPEREAKTTGLDNKVNEGYYLTRPLANKISKDAYFPAMIGFSLAKNLQLTVGDELVLISQ 178
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN---AVSGIEVFVKDPDA 236
G + + Y+ VY+SL + + ++ V + + +
Sbjct: 179 GIDGSIANDIFNVVAIVGDASSYERMNVYISLTAMREFLSMAGDTSKVHELALILSSQSQ 238
Query: 237 IEKTHENIVRILGNG-VVVIDWQQRYQIFFSCYES 270
+ L + + V WQ F+ ++
Sbjct: 239 AREFAAKTQSALKDESLSVEPWQVVESSFYKSMQA 273
>gi|27367569|ref|NP_763096.1| ABC transporter involved in lipoprotein release permease [Vibrio
vulnificus CMCP6]
gi|27359141|gb|AAO08086.1|AE016812_68 ABC-type transport system, involved in lipoprotein release,
permease component [Vibrio vulnificus CMCP6]
Length = 421
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 38/272 (13%), Positives = 90/272 (33%), Gaps = 23/272 (8%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AW L N + S +S + + I V AL + + + GH
Sbjct: 12 SLRLAWLNLKRNGRR------SLLSVLIIAIAVFALTSAGGFGLYTYDSLKESTARDTGH 65
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLS----------SGGSGVL 117
+ I + + + + PD + + S + +
Sbjct: 66 ITISTPGFFAKEEEMPLSNGLSQPDDLIASVIGLNEVRGVQPRIEFNGLISNGSKSAIFV 125
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINI-LSPYGD 176
G+++ +F G ++ + ++ + ++ + +
Sbjct: 126 GIGVNDREFDMKGPFLDVREGKTLSNPRGQRYDPAEPEVMLAMDLARNLNVTVGDWITLL 185
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
T + + + V G++ P+ D +Y+ + AQ + VS I VF+ + +
Sbjct: 186 ATTTDGALNAYDFKVRGLYATGVPELDKRQLYIHIDSAQSLL-ATDKVSVISVFLFETEK 244
Query: 237 IEKTHENIVRIL---GNGVVVIDWQQRYQIFF 265
+++ +L + + WQ+R FF
Sbjct: 245 TAAVQQHLSALLSQFSQELKLTPWQER--AFF 274
>gi|325299733|ref|YP_004259650.1| hypothetical protein Bacsa_2643 [Bacteroides salanitronis DSM
18170]
gi|324319286|gb|ADY37177.1| protein of unknown function DUF214 [Bacteroides salanitronis DSM
18170]
Length = 406
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A R L +N+ AF ++ +G++IGV ++I ++++ G + + +++ + ++
Sbjct: 7 FKIALRALANNKLRAF------LTMLGIIIGVASVIAMLAIGQGSKRSIQQQISEMGSNM 60
Query: 69 VIQQK 73
++
Sbjct: 61 IMIHP 65
>gi|160902371|ref|YP_001567952.1| hypothetical protein Pmob_0906 [Petrotoga mobilis SJ95]
gi|160360015|gb|ABX31629.1| protein of unknown function DUF214 [Petrotoga mobilis SJ95]
Length = 362
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 41/261 (15%), Positives = 90/261 (34%), Gaps = 48/261 (18%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+++A + ++KN S I ++IGV +IVV S++NGF +I + H+
Sbjct: 11 LLLAISFFTRSKKNF------KFSLIAMIIGVWGIIVVTSIINGFDSLLIDSITNFYPHL 64
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
V++ Y S + + S ++ +
Sbjct: 65 VVRGNY-----------------------TQNSSEIDKIVNFNISSVAVINQSKIAFSQL 101
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
++ Y N+ +G+I+G L + + I V G+ +
Sbjct: 102 MELDDLSIYEGFINEEKGTEGLILGNKL------ADNLNVEIGDTIITVRTKGLLPIFQE 155
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
T+ G+F YD+ + ++ Y +F+K+P+ ++ E
Sbjct: 156 STITGIFDSGVYSYDSTFILSQNSNSKEYTG---------IFLKNPNKAQQFKEK----Y 202
Query: 249 GNGVVVIDWQQRYQIFFSCYE 269
+ + W++ + +
Sbjct: 203 LSSYSALTWEESNETLAKAVQ 223
>gi|163788054|ref|ZP_02182500.1| ABC-type transport system [Flavobacteriales bacterium ALC-1]
gi|159876374|gb|EDP70432.1| ABC-type transport system [Flavobacteriales bacterium ALC-1]
Length = 420
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/278 (13%), Positives = 78/278 (28%), Gaps = 30/278 (10%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A +LF+ K + I+ +GV G+ + I ++S M G + +L HV
Sbjct: 8 LSIAKTHLFTKVKQ------TSIAALGVTFGIGSYITLVSFMTGLNTMLDDLILNQTPHV 61
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + P I + L +
Sbjct: 62 HVYNEIEPSKKQPVSLYDNFKESFNIVHSIKPKMSQKKIHNALPIISYLGNDENVRGVLP 121
Query: 129 LQNSFSRFYGNVSND--FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ + G I L + L + +G+GI
Sbjct: 122 QVKTQIFYIAGSIELGGNLTGINAIDEARLFNMGDYIVEGSAEALQTTDNGILLGIGIAK 181
Query: 187 KSY-------------------TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSG 226
K ++G ++ D D + +++ Q ++ ++
Sbjct: 182 KMSLKVGDRVQVSPINGGIFPLKIVGFYQSGIADLDAIQSFTNIKTVQRILGKAKDYITD 241
Query: 227 IEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIF 264
I V + D + + I + + ID + F
Sbjct: 242 INVKLYDIEEALPLSKKIEQQF--KLKAIDIKTANAQF 277
>gi|294496361|ref|YP_003542854.1| hypothetical protein Mmah_1714 [Methanohalophilus mahii DSM 5219]
gi|292667360|gb|ADE37209.1| protein of unknown function DUF214 [Methanohalophilus mahii DSM
5219]
Length = 404
Score = 49.8 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/247 (11%), Positives = 76/247 (30%), Gaps = 7/247 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A+ + S + S ++ +GV+IGV A+I +S+ F + + + +
Sbjct: 7 ALKLAFASIRSAKLR------SALTTLGVIIGVAAVIANISLGASFGQYFEEEIGASGTN 60
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
++ V N ++ V V P A + S+ + + +++ +
Sbjct: 61 FIVVFTEKNNVFGDSQFNIVENTKGVAAVSPINQQSATLRYQSAERTATVSGVLADYEEV 120
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ + G + + +
Sbjct: 121 GNIRMEHGQFITNQDQNVAVIGSDVAYEKFDRNLSVKNFINISIKNVDGGVSTRTFRIKG 180
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ +G V++ L Q + ++ + G + + + + +++
Sbjct: 181 IVQDPDASFVSPEVDPSGRVFIPLSVMQEMQHRDD-IGGFFIKADSLEILNRVTDDVDEN 239
Query: 248 LGNGVVV 254
L V V
Sbjct: 240 LARSVGV 246
>gi|116749925|ref|YP_846612.1| hypothetical protein Sfum_2498 [Syntrophobacter fumaroxidans MPOB]
gi|116698989|gb|ABK18177.1| protein of unknown function DUF214 [Syntrophobacter fumaroxidans
MPOB]
Length = 380
Score = 49.8 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 49/258 (18%), Positives = 95/258 (36%), Gaps = 21/258 (8%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+AWR ++ NR+ I+IAS +G+ I +++ G ++ + + +
Sbjct: 5 LAWRSIWRNRRRTLITIASL------ALGLTIAIFFIALSEGVHNQVVNEAVRMQAGHIT 58
Query: 71 QQKYYPLVDYQ--------FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ R + ++ + V+ S+G GV V G+
Sbjct: 59 VEHEAYQAAPAVDLFIGGVDRLRRRIDGMEAVEATKLLIRGQGVANSSAGAVGVAVMGVE 118
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S + + + + I+G+ LA L ++ G K+ + + +
Sbjct: 119 PSVEAGTSPLARHMVTGSTLEDGDDRKAILGEHLADQLKLTQGSKLVLTTNNARGELVEE 178
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTH 241
R K FR+ + D +V + L+ AQ F L + + + V +K P +E T
Sbjct: 179 LCRVKGI-----FRIGSDEIDGYLVQIPLEFAQRVFGLQPDEATQLGVVLKRPSELEATI 233
Query: 242 ENIVRILGNGV-VVIDWQ 258
I I V+ WQ
Sbjct: 234 GAIKAIEREEYAAVLPWQ 251
>gi|320532764|ref|ZP_08033546.1| efflux ABC transporter, permease protein [Actinomyces sp. oral
taxon 171 str. F0337]
gi|320135009|gb|EFW27175.1| efflux ABC transporter, permease protein [Actinomyces sp. oral
taxon 171 str. F0337]
Length = 860
Score = 49.4 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 39/259 (15%), Positives = 73/259 (28%), Gaps = 11/259 (4%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
VAWR + ++ K F ++ VM+GV L +++ E + +
Sbjct: 4 VAWRSVRAHAKQFF------LTTFAVMLGVAFLSGTLALRASMSETFSNLLSSTVTSDLY 57
Query: 71 QQKYYPLVDYQ-FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
Q + + P + + V G V +N
Sbjct: 58 VQGPKIATNGDTSSSQSAPTQPIDGSLADQIKQIDGVETAKPGVQTSGVLVGANDAPVAN 117
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
+ + F + + + G N GD T + +
Sbjct: 118 MGAPTLFLPLYEKEPGLTWAQGHRPQGESEIALESGALRNSGLKVGDTTHIVLQGHPTEV 177
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
V+G F +V M + VS I V V + E + +IL
Sbjct: 178 KVVGEFHFESSMAAATVVGMDPDYLLPLAAPDGKVSSISVDVAKGASAETVKSEVTKILP 237
Query: 250 NGVVVID----WQQRYQIF 264
+G V +++ +
Sbjct: 238 DGTRVQTRAEVIKEQNKAI 256
>gi|330875750|gb|EGH09899.1| macrolide ABC efflux protein [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
Length = 657
Score = 49.4 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 36/243 (14%), Positives = 89/243 (36%), Gaps = 18/243 (7%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +++
Sbjct: 273 AWRVMWVNR------FRTALTLLGIVIGVASVVVMLAVGEGSKRQVMAQMSSFGSNIIYL 326
Query: 72 QKYYPLVDYQFIANRLD------FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
P L+ +P+V ++P GQA V + S + ++
Sbjct: 327 NGKAPNPRAPKGVITLEEVAALGELPEVKMIMPVNGGQAGVRFGNVDHSSYVGGNDTHFP 386
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ Y + +++ +IG + + L D I +V +G+
Sbjct: 387 AIFNWPVAEGSYFSEADEQSAAAVAVIGYKVRQKLFGDRIDPIGQYILIENVPFQVVGVL 446
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ G + F ++ I + +D + +++ I
Sbjct: 447 QEKGATSGDLDSDNRIAIP-----YSSASIRLFGSQDPE-YITIATRDANNVKQAEAAIR 500
Query: 246 RIL 248
+L
Sbjct: 501 NLL 503
>gi|228471950|ref|ZP_04056719.1| macrolide export ATP-binding/permease protein MacB [Capnocytophaga
gingivalis ATCC 33624]
gi|228276719|gb|EEK15427.1| macrolide export ATP-binding/permease protein MacB [Capnocytophaga
gingivalis ATCC 33624]
Length = 405
Score = 49.4 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/264 (9%), Positives = 79/264 (29%), Gaps = 12/264 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+AWR + N+ + ++ +G++IGV ++I ++++ G ++ + + + + ++
Sbjct: 7 FRIAWRAILLNKTR------TLLTMLGIIIGVGSVITMLAIGEGSKKSIKENISKMGTNM 60
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + + + + + + + +N+ +
Sbjct: 61 LNIRPGAGMFGGVRNNSDMQSLKLTDYLALKKEAKLLKYVTPVVSGNGQAIVGANNWPTS 120
Query: 129 LQNSFSRFYGNVSNDFDRGKGV------IIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + + + G + K I + SP G
Sbjct: 121 IYGVNTEYLPIREWEVEEGAMFGQDELDNLSKVAVIGRTIQKNLFPDGDSPIGQTIRFKN 180
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ F + ++ Q + + I + + E
Sbjct: 181 IPFKIIGILAAKGESNFGQDQDDIIIAPYTTVQKRVLAQTYLQSIVASAINENEAENAVN 240
Query: 243 NIVRILGNGVVVIDWQQRYQIFFS 266
+ +IL + Q+ FS
Sbjct: 241 EVKKILERTHNIAADQENNFNVFS 264
>gi|229084019|ref|ZP_04216315.1| ABC transporter permease protein [Bacillus cereus Rock3-44]
gi|228699309|gb|EEL51998.1| ABC transporter permease protein [Bacillus cereus Rock3-44]
Length = 387
Score = 49.4 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 36/246 (14%), Positives = 78/246 (31%), Gaps = 20/246 (8%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNG----FREDM--IKRVLGI 64
+A +F+++ S ++ +G++IGV A+I ++S+ +G FRE + K+
Sbjct: 1 MALSSIFAHKMR------SILTMLGIIIGVSAIITIISIGDGTNAKFREQIGKEKKDQFS 54
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + + IP V +V P V G+ V + +
Sbjct: 55 VNYTTEDYSDMDGKISASMYENISKIPGVQEVYPDVRGKEKVYAGKKELDLDITGAKGDY 114
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + D D+ + I+ DK+ +
Sbjct: 115 FEDTSRFVLEHGRLFTAADLDKPQHTIVL-------HKDAFDKLFSSWESNLYVDIKGTP 167
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ +S + + F +N GI V + + + +
Sbjct: 168 YKVIGVYSNKSTAMMGGMEFKEGAISAENWPVLFG-KNNYDGITVKLAPGQDKKTVQDAV 226
Query: 245 VRILGN 250
V+ L +
Sbjct: 227 VKSLND 232
>gi|325959528|ref|YP_004290994.1| hypothetical protein Metbo_1800 [Methanobacterium sp. AL-21]
gi|325330960|gb|ADZ10022.1| protein of unknown function DUF214 [Methanobacterium sp. AL-21]
Length = 393
Score = 49.4 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/256 (13%), Positives = 71/256 (27%), Gaps = 22/256 (8%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALI--------VVMSVMNGFREDMIKRVL 62
+ + +F N+ S ++ IG+ IGV A++ + S N +
Sbjct: 6 LILKNIFRNKSR------SLLAIIGIAIGVAAVVGLGMVTDNLSKSTENALTAGAGDFSV 59
Query: 63 GINGHVVIQQKYYPLVDYQFIANR--LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + N+ + I + V V LS+ +
Sbjct: 60 IAATGPNNGGGPPGGMGGDQVINQTKVTEISKITGVGSAVGVLRTSVDLSNSTNTTTNST 119
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
S+F + + ++S D + + + + + +++
Sbjct: 120 SGPSNFRSMTSIIGIDSSSISMDDIVVTNGTVYSNNNEVIIGKTAAQEMNKTVGDNISIS 179
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ G F D+ + MSL Q N VS I V +
Sbjct: 180 NNTFKITGIYETGNF------MDDRGIVMSLDSLQSLTNKTGEVSLIIVKANNGTDATSL 233
Query: 241 HENIVRILGNGVVVID 256
I N +
Sbjct: 234 ATKIQNNYPNELTTST 249
>gi|255654523|ref|ZP_05399932.1| ABC transporter, permease protein [Clostridium difficile QCD-23m63]
gi|296449249|ref|ZP_06891035.1| ABC superfamily ATP binding cassette transporter, permease protein
[Clostridium difficile NAP08]
gi|296880776|ref|ZP_06904725.1| ABC superfamily ATP binding cassette transporter, permease protein
[Clostridium difficile NAP07]
gi|296261918|gb|EFH08727.1| ABC superfamily ATP binding cassette transporter, permease protein
[Clostridium difficile NAP08]
gi|296428223|gb|EFH14121.1| ABC superfamily ATP binding cassette transporter, permease protein
[Clostridium difficile NAP07]
Length = 822
Score = 49.4 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/248 (11%), Positives = 63/248 (25%), Gaps = 8/248 (3%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FE +AW L N+ I+I S I + V +S + +
Sbjct: 431 IKNFERHLAWLNLKRNKGRTIITILSLFMSI-------TVFVALSEFSNVLDVSRSVSNL 483
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
G + + + + + +
Sbjct: 484 KEGDFSLTNEISGFDKSILDKIDNMKNVNRTSFIKYSEYKQGEIDTDINFENSGEMLKII 543
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + + + K+ + K L P ++T
Sbjct: 544 GIDEQTLKDLMPSITDSTLEDFKNGSICFIKNPLAISTPGVKTKYTNLKPKDNITINKKQ 603
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ S F + + + N +N + I ++ KD +E+ +
Sbjct: 604 LDIYSTVDKMFFLQGNGWVNGVDIIVYDSVYNTLTN-KNKFNQINIYAKDKSDLEQIRLS 662
Query: 244 IVRILGNG 251
I +I N
Sbjct: 663 IEQICENN 670
>gi|312887075|ref|ZP_07746679.1| protein of unknown function DUF214 [Mucilaginibacter paludis DSM
18603]
gi|311300387|gb|EFQ77452.1| protein of unknown function DUF214 [Mucilaginibacter paludis DSM
18603]
Length = 414
Score = 49.4 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 49/283 (17%), Positives = 95/283 (33%), Gaps = 46/283 (16%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+++ Y+ + +K + ++ +GV IG+ I + S+ GF + H+ I
Sbjct: 11 ISFTYIVNQKK------LTLVAALGVTIGIAVYIFMSSMTAGFSRSTDASIFKTTPHIRI 64
Query: 71 Q----------------------------QKYYPLVDYQFIANRLDFIPDVIKVLPFVSG 102
+ +++ I + L P V V P V+
Sbjct: 65 YKDDEISRSLISNDKTGKQLAIIVNPRVIPQSDKIINPDQIVSLLKQQPHVTVVSPQVTV 124
Query: 103 QAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGI 162
F + S +GV + G++++ G+++G +A + +
Sbjct: 125 TVFYNNGQSLINGVASGVNIEDADKMFNIQSTVVEGSMADLNTVPNGILLGSGIADKMNV 184
Query: 163 SIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFN-LE 221
GD I + S + K V G+F+ + D Y+ + A+
Sbjct: 185 KTGDNITLTSSRNVI---------KVMKVTGIFQTKNSGVDKTKSYIDISAARQLLKESP 235
Query: 222 NAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIF 264
VS I V V D ++ ++ G DWQ Q
Sbjct: 236 TYVSDINVDVTDFNSAPFYAVQFSKL--TGYRAEDWQSANQTL 276
>gi|307329092|ref|ZP_07608259.1| protein of unknown function DUF214 [Streptomyces violaceusniger Tu
4113]
gi|306885287|gb|EFN16306.1| protein of unknown function DUF214 [Streptomyces violaceusniger Tu
4113]
Length = 843
Score = 49.4 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 40/260 (15%), Positives = 77/260 (29%), Gaps = 21/260 (8%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMN----GFREDMI 58
+F A R + S++ +++ + +GV LI ++ N G +
Sbjct: 1 MFRT-----ALRNVLSHKGRLLMTVLAV--MLGVAFTSGTLIFTSTISNAYRKGSEKGFS 53
Query: 59 KRVLGINGHVVIQQKYYPLVDY--QFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
+ I H Q Q + +P V V V+G+A V+ + G
Sbjct: 54 DVDVAIQPHKKSGQGKPGDPPDLSQRLLGTAAGLPHVASVTGTVTGEAAVADKNGDLIGR 113
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
+ + + +R+ V + A IGDK+ +
Sbjct: 114 GFSTLGANYYPGANGQDARYPMKRGRPPTAANEVALDARTAERAHYKIGDKVRMSVDGPV 173
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
+ M +GI + + V + +Q F + S I + +
Sbjct: 174 LDQMVVGIFTTDDGTVAAGGTL--------VLLDTSTSQRLFTRQGEFSEIHIKADPGTS 225
Query: 237 IEKTHENIVRILGNGVVVID 256
I IL +
Sbjct: 226 QSALKREIESILPAHTRAVT 245
>gi|260886804|ref|ZP_05898067.1| macrolide export ATP-binding/permease protein MacB [Selenomonas
sputigena ATCC 35185]
gi|330839387|ref|YP_004413967.1| protein of unknown function DUF214 [Selenomonas sputigena ATCC
35185]
gi|260863403|gb|EEX77903.1| macrolide export ATP-binding/permease protein MacB [Selenomonas
sputigena ATCC 35185]
gi|329747151|gb|AEC00508.1| protein of unknown function DUF214 [Selenomonas sputigena ATCC
35185]
Length = 405
Score = 49.4 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/255 (12%), Positives = 84/255 (32%), Gaps = 12/255 (4%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A L +N+ S ++ +G++IGV A+I ++S+ G + ++ + + +
Sbjct: 6 SITIALHELLANKLR------SVLTMLGIIIGVAAVIAMVSIGMGVKSNVEDSMASLGSN 59
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
++I A + + +S N +++
Sbjct: 60 MLIVTPGAANSGGIRGAAGSRESLKYDDAVAIKKKIKNIDHVSPIVQRSYQIVYGNQNWN 119
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ + Y ++ + I D + +++ + +G P+G IR
Sbjct: 120 TVVMGVTPEYMSIRSLTLTVGTFISQTDNDKRQRVAVIGPTVARNLFGSENPIGKNIRIH 179
Query: 188 SYTVLG------MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ + + +V + L Q + I + V + I +
Sbjct: 180 NQPFKIIGVLASKGQSSMGQDQDDVVIVPLMTEQERLLGITHIQMINLQVSEASKIVQVQ 239
Query: 242 ENIVRILGNGVVVID 256
+ +L +++
Sbjct: 240 SEVETLLRQRHHILN 254
>gi|228469523|ref|ZP_04054516.1| efflux ABC transporter, permease protein [Porphyromonas uenonis
60-3]
gi|228308873|gb|EEK17548.1| efflux ABC transporter, permease protein [Porphyromonas uenonis
60-3]
Length = 415
Score = 49.4 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/279 (9%), Positives = 83/279 (29%), Gaps = 18/279 (6%)
Query: 3 IFSRFEVIVAWR-YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+ R + +A + Y NR+++ + + + + + +++ +++M+GF+ + V
Sbjct: 1 MRLRLPIWLARQLYSRENRRHSKVYALVRFAIPAIALSLAVMLLGIAIMDGFQYSVRDTV 60
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ G V++ + +D + VS + +++
Sbjct: 61 RLVTGDVILCEYGKQPIDLDNVITL-----TPQMTQRMNEMPEIVSVRPVRTAVGMIKTD 115
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
S + + + + + + L+ V
Sbjct: 116 STYQGVAVTGVDDFTFLEPLCASGNLSDTTLAEGANPIVLPKASAQKLGLTIGDKVVLYF 175
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAI--- 237
+G + + + + + + Y++ N + IE+ K+ D
Sbjct: 176 LGDKVSVRSFTLIAILELTNTAQPLAYVTNDLLGRVGGWQPNQYTRIEILAKNTDRSLLD 235
Query: 238 --EKTHENIVRILGNG------VVVIDWQQRYQIFFSCY 268
+ +++ L + + Q +
Sbjct: 236 METSLSDKLIQSLSEPGVTHETLGIYTGTQINGGVYQWI 274
>gi|94985476|ref|YP_604840.1| hypothetical protein Dgeo_1376 [Deinococcus geothermalis DSM 11300]
gi|94555757|gb|ABF45671.1| protein of unknown function DUF214 [Deinococcus geothermalis DSM
11300]
Length = 386
Score = 49.4 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/248 (10%), Positives = 67/248 (27%), Gaps = 12/248 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+AW+ L + ++ +G+ + V +++V +S+ G R+ + I V
Sbjct: 7 WKLAWKGLTRRPVR------TLLTALGITVAVASMVVFLSLGEGIRKVFTSELGAIGPDV 60
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + D+ K+ + + + VRG + S
Sbjct: 61 QVSLSGFSQGFAPQPNLPQAVTEDLQKLAGELGIITITPVVMA------VRGSLDVSQST 114
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ G + A + + ++
Sbjct: 115 VLYGLPAAQGVQAVFPSVRAASGRALTAADEGQGVAVVGAKAAQNLHLAVGSVLNLNRRN 174
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ + +++ L Q + VS + + + +P + I R L
Sbjct: 175 RVKVVGVLAPESGLVDNFIFLPLTTLQRAEGAQGRVSLVALKLANPRDAQAVAHTIARRL 234
Query: 249 GNGVVVID 256
Sbjct: 235 NVEAQTQS 242
>gi|54302805|ref|YP_132798.1| hypothetical protein PBPRB1126 [Photobacterium profundum SS9]
gi|46916229|emb|CAG22998.1| conserved hypothetical protein [Photobacterium profundum SS9]
Length = 409
Score = 49.4 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 34/253 (13%), Positives = 74/253 (29%), Gaps = 8/253 (3%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+AWR L+ ++ ++ ++ + + + + S+ G I ++
Sbjct: 4 KLAWRNLWRQKRRTVLTASALALAL------LLSLFMRSLQEGGYASNIDNSARFFTGLI 57
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
Q + V + + S +
Sbjct: 58 QLQHPEFRESQSIDDLLSATDAFIEPVRSNPHITHLLPRIESFALAAAAEKSKGVMVLGI 117
Query: 130 QNSFSRFYGNVSNDFDRGKGVII--GKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
Y ++S G+ + + L +
Sbjct: 118 SPELENQYSHISQRLVAGEYLTDGDSQVLVGEGLAKSLGLSVGDDIILYGQGYHGQTAAG 177
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
Y + G+ + P D +VY+ L +AQ ++ N V+ + D +E+T + + R
Sbjct: 178 LYPIKGIVKFPIPALDQQLVYLPLTQAQTLYSTGNQVTAWVLHTDDLVNLEQTVDELSRT 237
Query: 248 LGNGVVVIDWQQR 260
+ VV DWQ
Sbjct: 238 YTDRAVVRDWQDL 250
>gi|237801109|ref|ZP_04589570.1| macrolide ABC efflux protein [Pseudomonas syringae pv. oryzae str.
1_6]
gi|331023966|gb|EGI04023.1| macrolide ABC efflux protein [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 603
Score = 49.4 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 36/243 (14%), Positives = 89/243 (36%), Gaps = 18/243 (7%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +++
Sbjct: 272 AWRVMWINR------FRTALTLLGIVIGVASVVVMLAVGEGSKRQVMAQMSSFGSNIIYL 325
Query: 72 QKYYPLVDYQFIANRLD------FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
P L+ +P+V ++P GQA V + S + ++
Sbjct: 326 NGKAPNPRAPKGVITLEEVAALGELPEVKMIMPVNGGQAGVRYGNVDHSSYVGGNDTHFP 385
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ Y + +++ +IG + + L D I +V +G+
Sbjct: 386 AIFNWPVAEGSYFSEADEQSAAAVAVIGYKVRQKLFGERIDPIGQYILIENVPFQVVGVL 445
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ G + F ++ I + +D + +++ I
Sbjct: 446 QEKGATSGDLDSDNRIAIP-----YSSASIRLFGSQDPE-YITIATRDANNVKQAEAAIR 499
Query: 246 RIL 248
+L
Sbjct: 500 SLL 502
>gi|307719908|ref|YP_003875440.1| hypothetical protein STHERM_c22450 [Spirochaeta thermophila DSM
6192]
gi|306533633|gb|ADN03167.1| hypothetical protein STHERM_c22450 [Spirochaeta thermophila DSM
6192]
Length = 399
Score = 49.4 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 195 FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN-GVV 253
F +D MV++S + AQ + + V+ I V +DP+ + I +L G
Sbjct: 183 FSTDSTSFDERMVFVSREAAQELLGI-SEVTEIRVVCEDPEDADAVKAGIAPLLDRWGAE 241
Query: 254 VIDWQQRYQIF 264
W++
Sbjct: 242 AWTWKELQGSL 252
>gi|56964455|ref|YP_176186.1| peptide ABC transporter permease [Bacillus clausii KSM-K16]
gi|56910698|dbj|BAD65225.1| antimicrobial peptide ABC transporter permease [Bacillus clausii
KSM-K16]
Length = 397
Score = 49.4 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/259 (10%), Positives = 82/259 (31%), Gaps = 12/259 (4%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M+I +A+ + + + + ++ +G++IGV A+I+V+++ G + + +
Sbjct: 1 MNIIENI--KMAFHSIAAQKLR------ALLTTLGIIIGVAAVIMVVAIGQGAEQKLKAQ 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
++G+ I + + + + V + + S ++S +
Sbjct: 53 IVGVENIREIYFEPSEFDEQENPNIYAFWQYSEQDVTDIQALPSVQSVVASSAEHTTILA 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLG---ISIGDKINILSPYGDV 177
+ + + + G + L S+ +
Sbjct: 113 GDEKVETEVNGINMHYMDLYDYEALEGNLLHPVDYLTGTRKAVITSVLAEQLFPYESAVG 172
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
+ +G + +Y+ + + + + F + I + + + +
Sbjct: 173 QTVKVGAYPIEIVGVLAPSDSIINYEREQLLLPYETWKQIF-FRDGFDSIHIKAETVEDV 231
Query: 238 EKTHENIVRILGNGVVVID 256
E + IL +D
Sbjct: 232 ELAVVDAAAILNENHSTVD 250
>gi|291562290|emb|CBL41106.1| ABC-type antimicrobial peptide transport system, permease
component [butyrate-producing bacterium SS3/4]
Length = 394
Score = 49.4 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 13/66 (19%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + ++ N+ +F ++ +G++IGV ++I+++S++NG+ M++ + +
Sbjct: 4 SFKMALKSIWGNKMRSF------LTMLGIIIGVASVIILVSIVNGYMSYMVESFSSMGVN 57
Query: 68 VVIQQK 73
+ Q
Sbjct: 58 QITVQY 63
>gi|187780157|ref|ZP_02996630.1| hypothetical protein CLOSPO_03753 [Clostridium sporogenes ATCC
15579]
gi|187773782|gb|EDU37584.1| hypothetical protein CLOSPO_03753 [Clostridium sporogenes ATCC
15579]
Length = 430
Score = 49.4 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 35/285 (12%), Positives = 88/285 (30%), Gaps = 41/285 (14%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING---- 66
+ WR L + F ++ +GV+IG +A+ V++S+ NGF + M ++
Sbjct: 12 IIWRNLLKRKGRTF------LTMLGVIIGSIAIYVIISLGNGFEKYMSSQLNSFGDVNII 65
Query: 67 -----------HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSG 115
+ K + L+ + V +P ++ A ++ S
Sbjct: 66 NIFPYSDSTATYQGGNIKNRKKILNDKTLKELNKLEFVNYSIPKLNTNADIAYKKSEMKS 125
Query: 116 VLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYG 175
+ G+S ++S Y N S + + L + + ++
Sbjct: 126 SNLTGMSFKNYSKDHELLFGKYPNDSKNEVILGYKLAAYLLNKKDVDKVKEEEIKKILRK 185
Query: 176 DVTPMGMGIRSK----------------SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFN 219
+ K ++++ P + + + +
Sbjct: 186 KLKVKVSRPNEKGEEEWITYTVKVSGICKQNFSDDYQIKTPLSFTKNILIYKNNDEKFLK 245
Query: 220 LENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIF 264
+ S I++ +K + + + + NG + ++
Sbjct: 246 NKGYES-IDLVLKSQEKSSEAEKYLKD---NGYLYQSLKEMQSSI 286
>gi|86140302|ref|ZP_01058861.1| putative transmembrane permease [Leeuwenhoekiella blandensis
MED217]
gi|85832244|gb|EAQ50693.1| putative transmembrane permease [Leeuwenhoekiella blandensis
MED217]
Length = 373
Score = 49.4 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 34/230 (14%), Positives = 74/230 (32%), Gaps = 3/230 (1%)
Query: 42 ALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIAN--RLDFIPDVIKVLPF 99
+++ ++ G ++ + ++V NG ++I Q D F PD V
Sbjct: 3 MMMITIATGVGLQQKIKEKVSAFNGDIIISQFDGNNSDITLNPIPKNQPFYPDFESVPEV 62
Query: 100 VSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARN 159
Q + + GI + + + L +
Sbjct: 63 THVQTTATKAGVIRTATDFEGIIVKGVGADYRWDYMEDFLIEGRVPDYTQNLNTEILVSS 122
Query: 160 LGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF- 218
+ N G ++ + ++G++ F ++D ++ ++ Q
Sbjct: 123 YQANRLGFKNGDKVIVFFLKEDGGFLNRRFDIVGIYDSGFQEFDESFLFADIRHIQKLNK 182
Query: 219 NLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
E+ V G EVFV D D +++ I + + + Q+Y F
Sbjct: 183 WEEDQVGGFEVFVDDFDRLDEIGTAIYEHTDSFLNTMTITQKYYSIFEWL 232
>gi|302391168|ref|YP_003826988.1| hypothetical protein Acear_0376 [Acetohalobium arabaticum DSM 5501]
gi|302203245|gb|ADL11923.1| protein of unknown function DUF214 [Acetohalobium arabaticum DSM
5501]
Length = 421
Score = 49.4 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 35/271 (12%), Positives = 79/271 (29%), Gaps = 26/271 (9%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F +A + LF N+ + IS + + + V ++ V ++ G ++M L I
Sbjct: 1 MSFLWNLASKNLFRNKLR------TSISILAIALSVALVVFVKGLVVGMIDNMFS--LHI 52
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + L++ D + + ++ + + S
Sbjct: 53 QYEAGHAKIINQEYQQKERLLSLNYPVDGFNGAGITNMEQKLTEIEGVKRVIPRIKFGAS 112
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+++ R G + IG+ L I G K IL
Sbjct: 113 VIQDQEDNLVRLMGWGVQPKKELEFTNIGEKLTAGRMIKPGRKEVILGKDLLQKLDLDVG 172
Query: 185 RSKSYTVLGMFRMRFPDY--------------DNGMVYMSLQEAQLYFNLENAVSGIEVF 230
++ F D + Y+SL + Q + + + + +
Sbjct: 173 EKVTFLYQTSFGSFKGSTFKIVGQIASSLKLLDEKVFYLSLDQTQRILEMSDMATELLLE 232
Query: 231 VKDPDAIEKTHENIVRILGN----GVVVIDW 257
+ I++ + + +I W
Sbjct: 233 TNNYRKIDQILPKVNELFEQEGAEEYQLISW 263
>gi|313681967|ref|YP_004059705.1| hypothetical protein Sulku_0839 [Sulfuricurvum kujiense DSM 16994]
gi|313154827|gb|ADR33505.1| protein of unknown function DUF214 [Sulfuricurvum kujiense DSM
16994]
Length = 403
Score = 49.0 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/254 (11%), Positives = 78/254 (30%), Gaps = 11/254 (4%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
I+A R + + S ++ +G++IGV ++I ++ + + + + + +
Sbjct: 5 AFILALREIRRSALR------SILTTLGIVIGVASVIAMVMLGDATTAYVTNSISKLGSN 58
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
++I + Q G+ V + + +
Sbjct: 59 MLIVRPGQDRHGPQGTDATAKRFTHSDIATVRREIGGLKGVAPVASKGMQVVYGNQNYST 118
Query: 128 YLQNSFSRFYGNVSNDF-----DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S + ++ F + GK + + P G +G
Sbjct: 119 SIDGSDNDYFTVKDWVFESGRAFAPAELQGGKAVCVIGETIKKELFGDQDPIGASIRLGN 178
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ F + ++ + ++ Q + +S I + K+ +IE
Sbjct: 179 FSCKVIGLLHPKGASMFGMDQDDIIVVPIRMFQRRISGNQDISVIMLSAKNASSIENIKN 238
Query: 243 NIVRILGNGVVVID 256
+I ++ + +
Sbjct: 239 SITALMRERRHIRN 252
>gi|258645296|ref|ZP_05732765.1| macrolide export ATP-binding/permease protein MacB [Dialister
invisus DSM 15470]
gi|260402646|gb|EEW96193.1| macrolide export ATP-binding/permease protein MacB [Dialister
invisus DSM 15470]
Length = 404
Score = 49.0 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/250 (10%), Positives = 72/250 (28%), Gaps = 9/250 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+++A+ +FSN+ S ++ +G++IGV A+I +MS+ G R D+ + + +
Sbjct: 8 SILMAFDSIFSNKMR------SLLTMLGIIIGVAAVIALMSLGYGVRADIENNIASLGSN 61
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ A L + + + +V + + +
Sbjct: 62 QITIIPGTSRKPGVRPAAGSMQSLTYKDYLAVRNLPNVSNAAPLVSNSYVVVSGNKNWTT 121
Query: 128 YLQNSFSRFYGN---VSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ S + + + S + +
Sbjct: 122 NVYGVTSDYLSISDLKIAEGRYWNEQEYTGRERVCVIGKTVATGLFGSESPVGQKIRIKG 181
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + + + + Q VS I + D + + + ++
Sbjct: 182 NPFTVIGVLESKGYSFIDQDDRILSPFTTVQERMMGITYVSRIVLTADDSNVLPQIEADV 241
Query: 245 VRILGNGVVV 254
+L +
Sbjct: 242 TNLLRTRHRI 251
>gi|309791835|ref|ZP_07686322.1| protein of unknown function DUF214 [Oscillochloris trichoides DG6]
gi|308226157|gb|EFO79898.1| protein of unknown function DUF214 [Oscillochloris trichoides DG6]
Length = 417
Score = 49.0 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 37/271 (13%), Positives = 82/271 (30%), Gaps = 28/271 (10%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M+I ++++ L +N+ + ++ +G++IGV A+I ++++ NGF+ + +
Sbjct: 1 MNIIE--SFRISFQALLTNKLR------AALTMLGIVIGVGAVIGMLAIGNGFQGFLNSQ 52
Query: 61 VLGINGHVVIQQKYYPLVDYQ----------------FIANRLDFIPDVIKVLPFVSGQA 104
+ V + I+ V A
Sbjct: 53 FDQLGIGTVYVAPFIDTNRIDVLQTASLTSADARAIMQPGRAPSVQSVAIEWSDNVQVLA 112
Query: 105 FVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISI 164
+ + + S + G + ++L L I+
Sbjct: 113 NGQRGTYSVRALSPSFFTISPQDLAAGRLLNANDEENRARVAVIGRSVAENLYGGLEIAF 172
Query: 165 GDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAV 224
G +I + ++ + + F Y+ G+ + + N V
Sbjct: 173 GQRIGLNGVQFEIVGVLSNPPGQVSVGSDPAEAIFIPYETGITRLFRNQTTDLIN----V 228
Query: 225 SGIEVFVKDPDAIEKTHENIVRILGNGVVVI 255
S + V D D I+ I IL +
Sbjct: 229 SFMTVKAVDRDRIDAAVREITTILREQHRLT 259
>gi|296445673|ref|ZP_06887627.1| ABC transporter related protein [Methylosinus trichosporium OB3b]
gi|296256776|gb|EFH03849.1| ABC transporter related protein [Methylosinus trichosporium OB3b]
Length = 658
Score = 49.0 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 33/252 (13%), Positives = 89/252 (35%), Gaps = 9/252 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A + ++R AF ++ +G++IGV +++ V+++ +G +E ++ + + +
Sbjct: 266 ALRMALLSMNAHRLRAF------LTMLGIIIGVASVVCVVALGSGSQERVLSNINALGTN 319
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + + I D + A +S+ + +++ +
Sbjct: 320 TLEIFPGKDFGDTRSGKIKTLVIADARALAQQPFVAAVAPTVSTSSTLRFASIEASAQVN 379
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ + R G+ + + + K + + +
Sbjct: 380 GVGEQYFRVKGSQLAEGRFLDADSVRSYAQDAVIDGNARKTLFPDGASNPVGRIVLVGRV 439
Query: 188 SYTVL---GMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
++ + F N VY+ Q F + ++ I V V D A ++ + +
Sbjct: 440 PCRIVGVIRQQQSGFGSSANPTVYLPYTTVQARFLGDLSLRSISVRVDDATATDQAEQGV 499
Query: 245 VRILGNGVVVID 256
+R+L D
Sbjct: 500 IRLLTERHKSKD 511
>gi|212694885|ref|ZP_03303013.1| hypothetical protein BACDOR_04419 [Bacteroides dorei DSM 17855]
gi|237710767|ref|ZP_04541248.1| ABC transporter permease [Bacteroides sp. 9_1_42FAA]
gi|237727157|ref|ZP_04557638.1| ABC transporter permease [Bacteroides sp. D4]
gi|265750438|ref|ZP_06086501.1| ABC transporter permease [Bacteroides sp. 3_1_33FAA]
gi|212662563|gb|EEB23137.1| hypothetical protein BACDOR_04419 [Bacteroides dorei DSM 17855]
gi|229434013|gb|EEO44090.1| ABC transporter permease [Bacteroides dorei 5_1_36/D4]
gi|229455489|gb|EEO61210.1| ABC transporter permease [Bacteroides sp. 9_1_42FAA]
gi|263237334|gb|EEZ22784.1| ABC transporter permease [Bacteroides sp. 3_1_33FAA]
Length = 406
Score = 49.0 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A R L +N+ AF ++ +G++IGV ++I ++++ G ++ + +++ + ++
Sbjct: 7 FKIALRALANNKLRAF------LTMLGIIIGVASVIAMLAIGQGSKKSIQQQISEMGSNM 60
Query: 69 VIQQK 73
++
Sbjct: 61 IMIHP 65
>gi|150005327|ref|YP_001300071.1| ABC transporter permease protein [Bacteroides vulgatus ATCC 8482]
gi|254883797|ref|ZP_05256507.1| ABC transporter permease [Bacteroides sp. 4_3_47FAA]
gi|294777171|ref|ZP_06742628.1| efflux ABC transporter, permease protein [Bacteroides vulgatus
PC510]
gi|319643525|ref|ZP_07998148.1| ABC transporter permease [Bacteroides sp. 3_1_40A]
gi|149933751|gb|ABR40449.1| ABC transporter permease protein [Bacteroides vulgatus ATCC 8482]
gi|254836590|gb|EET16899.1| ABC transporter permease [Bacteroides sp. 4_3_47FAA]
gi|294449040|gb|EFG17583.1| efflux ABC transporter, permease protein [Bacteroides vulgatus
PC510]
gi|317384930|gb|EFV65886.1| ABC transporter permease [Bacteroides sp. 3_1_40A]
Length = 406
Score = 49.0 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A R L +N+ AF ++ +G++IGV ++I ++++ G ++ + +++ + ++
Sbjct: 7 FKIALRALANNKLRAF------LTMLGIIIGVASVIAMLAIGQGSKKSIQQQISEMGSNM 60
Query: 69 VIQQK 73
++
Sbjct: 61 IMIHP 65
>gi|228913486|ref|ZP_04077115.1| ABC transporter permease protein [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228846073|gb|EEM91095.1| ABC transporter permease protein [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 375
Score = 49.0 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/222 (9%), Positives = 59/222 (26%), Gaps = 4/222 (1%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IGV A+I ++S+ +G +++
Sbjct: 3 SILTMLGIIIGVSAIITIISIGDGTNAKFREQIGNEKKDQFSVNYKTEDYSDMDGK---I 59
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
+ Q + + + D + + + + R
Sbjct: 60 SSSMYENISKISGVQEVYPDVKGKEKVYAGKKELDLDITGAKGDYFEDTSKFKLEHGRFL 119
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ ++ + S + + + + +
Sbjct: 120 TAADLDRPEHTIVLNTDAFDKLYSSWEPNLYIDIKGTPYKVVGVYSVKAMMGGMTFKEGV 179
Query: 209 MSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN 250
+S + + F +N + V + E + +V+ L
Sbjct: 180 ISAENWPVLFG-KNNYDSVTVKIAPGQDKETVQKAVVKSLNE 220
>gi|189461588|ref|ZP_03010373.1| hypothetical protein BACCOP_02247 [Bacteroides coprocola DSM
17136]
gi|189431698|gb|EDV00683.1| hypothetical protein BACCOP_02247 [Bacteroides coprocola DSM
17136]
Length = 406
Score = 49.0 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A R L +N+ AF ++ +G++IGV ++I ++++ G + + +++ + ++
Sbjct: 7 FKIALRALANNKLRAF------LTMLGIIIGVASVIAMLAIGQGSKRSIQQQISEMGSNM 60
Query: 69 VIQQK 73
++
Sbjct: 61 IMIHP 65
>gi|319406305|emb|CBI79942.1| ATP-binding protein of ABC transporter [Bartonella sp. AR 15-3]
Length = 660
Score = 49.0 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 33/262 (12%), Positives = 80/262 (30%), Gaps = 8/262 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++A + ++R F ++ +GV+IG+ ++I ++++ NG ++ ++ + + +
Sbjct: 269 AFVMALLAMNAHRMRTF------LTMLGVIIGIASVIAMIALGNGTQKKILDNLNSLGVN 322
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D Q D + S +S + +
Sbjct: 323 TLTIMPGKSFSDPQSGKITSLVEADAEALSELPYVAGVTSQISISSMVYYNAIEAKAIVI 382
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ F + G + + + D + + +
Sbjct: 383 GVGEQFFQIQGLKVIKGRLFNQSSVRDRAVDLIIEKEALSVLFPHSQEDPIGKIVRVGNV 442
Query: 188 SYTVLGMFRMRFP--DYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++G+ + D +Y+ Q+ F V I + V D + I
Sbjct: 443 PARIIGVVASQNNGGVSDTIQIYLPYTAVQMRFLGRTDVRSIILKVADNVDSQLAETMIR 502
Query: 246 RILGNGVVVIDWQQRYQIFFSC 267
R+L D+ R F
Sbjct: 503 RLLIMRHGQEDFFIRNSELFRA 524
>gi|330959097|gb|EGH59357.1| macrolide ABC efflux protein [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 596
Score = 49.0 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 36/243 (14%), Positives = 88/243 (36%), Gaps = 18/243 (7%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +++
Sbjct: 212 AWRVMWINR------FRTALTLLGIVIGVASVVVMLAVGEGSKRQVMAQMSSFGSNIIYL 265
Query: 72 QKYYPLVDYQFIANRLD------FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
P L+ +P+V ++P GQA V + S + ++
Sbjct: 266 NGKAPNPRAPKGVITLEKVAALGELPEVKMIMPVNGGQAGVRFGNVDHSSYVGGNDTHFP 325
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ Y + +++ +IG + + L D I +V +G+
Sbjct: 326 AIFNWPVVEGSYFSEADEQSAAAVAVIGYKVRQKLFGDRIDPIGQYILIENVPFQVVGVL 385
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ G + F ++ I + +D + + + I
Sbjct: 386 QEKGATSGDLDSDNRIAIP-----YSSASIRLFGSQDPE-YITIATRDANNVRQAETAIR 439
Query: 246 RIL 248
+L
Sbjct: 440 NLL 442
>gi|313610803|gb|EFR85805.1| ABC transporter, permease protein [Listeria monocytogenes FSL
F2-208]
Length = 240
Score = 49.0 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 31/250 (12%), Positives = 85/250 (34%), Gaps = 16/250 (6%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
MS+F +A + L S + F ++ +G++IGV ++I+++S+ +++ +
Sbjct: 1 MSLFQSV--KLALKQLLSAKFRTF------LTMLGIIIGVFSVILLVSIGEAISKNVATQ 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + ++V Y + +F + + ++ Q S + V G
Sbjct: 53 LGDMGSNLVSVSFYSDNPNDKFTYKDAKSLLNGAEIGSPEVVQTKEVRTSDKTASNQVTG 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
I+ S + + D + V + + + M
Sbjct: 113 ITEDYASIKNLEVASGRFCSNVDVRYAQKVTVIGSEIAKTYFKNQNPVGKHLQIAGARYM 172
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+G+ + + +++ + A+ F ++V V + + +
Sbjct: 173 VIGVLEEKGES-------LFGSADEKLFIPITSAERLF-KTDSVDLYYVQTNNTEQVSAA 224
Query: 241 HENIVRILGN 250
+ I + +
Sbjct: 225 VKRIEQKMSQ 234
>gi|223041421|ref|ZP_03611624.1| putative macrolide-specific ABC-type efflux carrier [Actinobacillus
minor 202]
gi|223017679|gb|EEF16086.1| putative macrolide-specific ABC-type efflux carrier [Actinobacillus
minor 202]
Length = 640
Score = 49.0 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/241 (8%), Positives = 77/241 (31%), Gaps = 7/241 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A +F+++ + ++ +G++IG+ ++I V+++ G +E ++ + + +
Sbjct: 252 SFKMAMSAIFAHKLR------ALLTMLGIVIGITSVISVVALGRGSQEQILSNINSLGTN 305
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + + I D + + + + + +
Sbjct: 306 TMTIMNGTGFGDRRANLTKNLTISDATMLAKQTYVDSTTPSSNLSATLIYGNTNVTGTVN 365
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ + G + + + + K ++ + + +
Sbjct: 366 GVGEQYLSVKGMKMVSGRFFTADEVTQAAQVVVIDA-NTKKDLKLTEPVEGKIILVDKKP 424
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ + + ++ + E ++ + V VKD + ++I +
Sbjct: 425 LKIIGLAEESNNMNQTSLKLWTPYTTLMQRISGEKSIDSLTVKVKDDIESQTAEKSITEL 484
Query: 248 L 248
L
Sbjct: 485 L 485
>gi|85860349|ref|YP_462551.1| export ABC transporter permease [Syntrophus aciditrophicus SB]
gi|85723440|gb|ABC78383.1| export ABC transporter permease protein [Syntrophus aciditrophicus
SB]
Length = 401
Score = 49.0 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 33/244 (13%), Positives = 86/244 (35%), Gaps = 9/244 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+++A+R + N +F ++ +G++IGV A+I+++++ G + +++ + +
Sbjct: 5 SILLAFREIRRNVLRSF------LTILGIVIGVAAVIIMVTIGGGATVQVSQQISSLGSN 58
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+++ L Q + D + V A V+ LSS + + S
Sbjct: 59 LLMVTPGKRLGPGQSSDTVPFKLSDAEAIARDVRSIAAVAPLSSRSLQAVSGNENWSTNV 118
Query: 128 YLQNSFSRFYGNVSN---DFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
++ N S + G + P G+ +
Sbjct: 119 TGTDNSYFKVTNRSVRSGRTFSESELRSGAAVCILGDTVRRKLFGNQDPMGEKIRLEKLS 178
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + + +V + L+ Q + I+V ++ + E+ + I
Sbjct: 179 CKVIGVLESKGQSTMGQDQDDIVVIPLRTLQRRITGSQNIGLIQVSAREGASTERAQQEI 238
Query: 245 VRIL 248
+++
Sbjct: 239 GKLM 242
>gi|90411328|ref|ZP_01219340.1| hypothetical protein P3TCK_10913 [Photobacterium profundum 3TCK]
gi|90327857|gb|EAS44188.1| hypothetical protein P3TCK_10913 [Photobacterium profundum 3TCK]
Length = 409
Score = 49.0 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/257 (13%), Positives = 80/257 (31%), Gaps = 16/257 (6%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+AWR L+ ++ ++ ++ + ++ M +E + +
Sbjct: 4 KLAWRNLWRQKRRTVLTASALALAL----------LLSLFMRSLQEGGYASNIDNSARFF 53
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS----D 125
+++ + D +P + V ++ L + +
Sbjct: 54 TGLIQLQHPEFKESQSIDDLLPATDAFIEPVRNNPHITHLLPRIESFALAAAAEKSKGVM 113
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVII--GKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ Y ++S G+ + + L
Sbjct: 114 VLGISPELENRYSHISQRLVTGEYLTDGDSQVLVGEGLAKSLGLSVGDDIILYGQGYRGQ 173
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ Y + G+ + P D +VY+ L +AQ +++ + V+ + D +E+T
Sbjct: 174 TAAGLYPIKGIVKFPIPALDQQLVYLPLTQAQTLYSIGDQVTAWVLHTDDLVNLEQTVNE 233
Query: 244 IVRILGNGVVVIDWQQR 260
+ R N VV DWQ
Sbjct: 234 LSRTYINRAVVRDWQDL 250
>gi|121595144|ref|YP_987040.1| hypothetical protein Ajs_2823 [Acidovorax sp. JS42]
gi|222111486|ref|YP_002553750.1| hypothetical protein Dtpsy_2312 [Acidovorax ebreus TPSY]
gi|120607224|gb|ABM42964.1| protein of unknown function DUF214 [Acidovorax sp. JS42]
gi|221730930|gb|ACM33750.1| protein of unknown function DUF214 [Acidovorax ebreus TPSY]
Length = 402
Score = 49.0 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/271 (12%), Positives = 91/271 (33%), Gaps = 12/271 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ ++ A R + N +F ++ +G++IGV A+I ++++ NG + ++
Sbjct: 1 MMLLNSLLQALRSIRRNLMRSF------LTVLGIVIGVSAVITMVTLGNGATLAVQAQIS 54
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ +++ + L D + + G V+ + + V+ G +
Sbjct: 55 SLGTNLLQVRPGQRLGPGGSGGAPSFKDVDAEAIAQQIGGILAVAPEARTSATVVANGRN 114
Query: 123 NSDFSYLQNSFSRFYGNVSND---FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + GN + + + +G + + G+
Sbjct: 115 WATSVMGSTNAWLQTGNWTLESGREFTTDELRVGAAVCLIGQTVRRELFAGGDALGERVR 174
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+ + + F + + +V + L+ Q V + V +KD E+
Sbjct: 175 VRQFSCEVVGVLASKGQGAFGNDQDDLVLLPLKTLQRRVTGSTRVPTLLVSMKDGSDPER 234
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYES 270
++ +L + D F+ ++
Sbjct: 235 VKASLTELLRERRKLADTDDDN---FNVLDT 262
>gi|160885957|ref|ZP_02066960.1| hypothetical protein BACOVA_03962 [Bacteroides ovatus ATCC 8483]
gi|260170585|ref|ZP_05756997.1| ABC transporter, permease protein [Bacteroides sp. D2]
gi|299145345|ref|ZP_07038413.1| macrolide export ATP-binding/permease protein MacB [Bacteroides
sp. 3_1_23]
gi|315918933|ref|ZP_07915173.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|156108770|gb|EDO10515.1| hypothetical protein BACOVA_03962 [Bacteroides ovatus ATCC 8483]
gi|298515836|gb|EFI39717.1| macrolide export ATP-binding/permease protein MacB [Bacteroides
sp. 3_1_23]
gi|313692808|gb|EFS29643.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 406
Score = 48.6 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A R L +N+ AF ++ +G++IGV ++I ++++ G ++ + +++ + ++
Sbjct: 7 FKIALRALANNKLRAF------LTMLGIIIGVASVITMLAIGQGSKKSIQQQISEMGSNM 60
Query: 69 VIQQKYYPL 77
++ +
Sbjct: 61 IMIHPGADM 69
>gi|328950630|ref|YP_004367965.1| protein of unknown function DUF214 [Marinithermus hydrothermalis
DSM 14884]
gi|328450954|gb|AEB11855.1| protein of unknown function DUF214 [Marinithermus hydrothermalis
DSM 14884]
Length = 405
Score = 48.6 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 37/262 (14%), Positives = 87/262 (33%), Gaps = 15/262 (5%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
AWR L+ ++ ++ V VM+ +V + + M ++L N
Sbjct: 2 WAFAWRNLWRHKSRN------LLTAAAVAFVVMSTLVYFGLGEAMKNGMF-QLLTKNSGH 54
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + +F + + + + QA + + + + S
Sbjct: 55 LSVRVKDWREVREFDRLLIRDAEALEARIRRAAPQATLRAVLEVPALLAGETRSRGVQLI 114
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
F+ + + + +A ++ K+ + P P GI + +
Sbjct: 115 GVRGFTEHLEEYLAAGRLPEPGALEE-IALGRALAEALKVGLGDPVFAFAPGTEGIGAAA 173
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV------FVKDPDAIEKTHE 242
YTV+G+ + + Y SL+ AQ AV+ E+ + + + +
Sbjct: 174 YTVVGLLDFPESAVEGRVAYTSLEAAQELA-APGAVTRFELHLPGLTKLNQEPEVFRLQD 232
Query: 243 NIVRILGNGVVVIDWQQRYQIF 264
+ LG + + +W++
Sbjct: 233 RLAAELGPSLAIENWREANPEL 254
>gi|15668983|ref|NP_247787.1| hypothetical protein MJ_0797 [Methanocaldococcus jannaschii DSM
2661]
gi|2496125|sp|Q58207|Y797_METJA RecName: Full=Uncharacterized ABC transporter permease MJ0797
gi|1591494|gb|AAB98792.1| hypothetical protein MJ_0797 [Methanocaldococcus jannaschii DSM
2661]
Length = 367
Score = 48.6 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 32/242 (13%), Positives = 70/242 (28%), Gaps = 31/242 (12%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A R L N S ++ +G++IGV A I + ++ G + I LG +
Sbjct: 3 FELAKRNLKRNLLR------SILALLGIIIGVAA-ISSLGILGGGLKQGIMENLGSISNY 55
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+I Y F ++ + + + V + +
Sbjct: 56 IIVFPNYQNGYTSFDKRDIEKLRVLNCKVIPVYATSDFVYIKGKNRKAYANIFGIDKNDI 115
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+L + + S DV
Sbjct: 116 K-----------------------YLNLKVKVSDTSVAVDTFFSNVNDVNVGNQLEIKNI 152
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN-AVSGIEVFVKDPDAIEKTHENIVRI 247
+ + + + ++ + + ++ N S I ++VK+ + I+K +I
Sbjct: 153 SLRICGIYNSTFLFPDNSLILTAKTYRRFYGENNYNYSRIILYVKNINDIDKIKNETDKI 212
Query: 248 LG 249
L
Sbjct: 213 LN 214
>gi|226311095|ref|YP_002770989.1| hypothetical protein BBR47_15080 [Brevibacillus brevis NBRC 100599]
gi|226094043|dbj|BAH42485.1| conserved hypothetical membrane protein [Brevibacillus brevis NBRC
100599]
Length = 403
Score = 48.6 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/250 (11%), Positives = 83/250 (33%), Gaps = 12/250 (4%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+++R + +N S ++ +G++IGV A+I ++++ G + ++ G+ +++I
Sbjct: 9 ISFRSIRANGLR------SVLTMLGIIIGVAAVIAMVAIGEGTSTSVASQINGLGSNLLI 62
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
+ + ++ S + + ++++S +
Sbjct: 63 VTPGQATQGRVSLGAGSLNTLTMADAEILTQKESISGVAPSVNARGQI-VWGSNNYSSML 121
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
S + V N ++ +++ + + + P+G ++
Sbjct: 122 EGTSADFPQVRNVEVGQGRFFSNFEVKMQYNVAVVGTEVVSNLFKGANPVGQTVQINRIP 181
Query: 191 VL-----GMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ + + + A V I V D +EK ++I
Sbjct: 182 FTIIGVLQSQGSSGMTNNDDRIIIPITTAMNRLTGGKNVGSIYVSAASSDLMEKAQQDIQ 241
Query: 246 RILGNGVVVI 255
+ L +
Sbjct: 242 QALRANHKLR 251
>gi|33241591|ref|NP_876532.1| hypothetical protein CpB0256 [Chlamydophila pneumoniae TW-183]
gi|33236099|gb|AAP98189.1| hypothetical protein CpB0256 [Chlamydophila pneumoniae TW-183]
Length = 503
Score = 48.6 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 35/250 (14%), Positives = 70/250 (28%), Gaps = 12/250 (4%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+FE VA +YL R + +I S S + + V IV +SV++G + I+ + +
Sbjct: 1 MKFEFSVALKYLIPGRGRLYSAIVSLFSVGIISLVVWLSIVFISVIHGLEQRWIEDLSQL 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + + + S+
Sbjct: 61 --------HSPITILPSDTYYSSYYYQIDKHSSLSNYTTKTLGEKIASPQVDPYDPESDY 112
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
G D + +G L G I + + +
Sbjct: 113 LLPETFPLKDCDLGGQQKDPVKMTLESLGPYLQSQHGKVIEFEQGVGYLDIKTSLKLQKP 172
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAV-SGIEVFVKDPDAIEKTHEN 243
+ ++ T + + D + Y N N SG + +D +E+ +
Sbjct: 173 QPRNLTHFLTYPSKLSYEDKVLPYDETDYTSAELNPFNRSPSGWQ---QDFHHLEELYRG 229
Query: 244 IVRILGNGVV 253
IL +
Sbjct: 230 ASIILPSTYK 239
>gi|32034668|ref|ZP_00134806.1| COG0577: ABC-type antimicrobial peptide transport system, permease
component [Actinobacillus pleuropneumoniae serovar 1
str. 4074]
gi|165977250|ref|YP_001652843.1| ABC transporter, ATP-binding subunit [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|190151168|ref|YP_001969693.1| macrolide ABC transporter permease/ATP-binding protein
[Actinobacillus pleuropneumoniae serovar 7 str. AP76]
gi|303251161|ref|ZP_07337345.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|303252690|ref|ZP_07338852.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307246742|ref|ZP_07528811.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307248884|ref|ZP_07530895.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|307251418|ref|ZP_07533332.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|307253497|ref|ZP_07535367.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307255727|ref|ZP_07537530.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307257912|ref|ZP_07539666.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|307260179|ref|ZP_07541888.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|307264517|ref|ZP_07546101.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|165877351|gb|ABY70399.1| ABC transporter, ATP-binding subunit [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|189916299|gb|ACE62551.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|302648429|gb|EFL78623.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|302650012|gb|EFL80184.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306852348|gb|EFM84584.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306854579|gb|EFM86771.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306856502|gb|EFM88644.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306858998|gb|EFM91041.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306861287|gb|EFM93278.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306863559|gb|EFM95488.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306865724|gb|EFM97603.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306870116|gb|EFN01876.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 646
Score = 48.6 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/241 (9%), Positives = 75/241 (31%), Gaps = 6/241 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++A+ + +++ F ++ +G++IG+ A++ V+++ G + ++ + +
Sbjct: 257 SFVMAFSMMRAHKIRTF------LTMLGIIIGIAAVVCVVALGEGTKHKVLNEFSSLGSN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + + DV + + LS + +N+ +
Sbjct: 311 TIDIFPGKNWGDTEAYKIQTLNSNDVNLLRQQPYVKGATPNLSLELPIRFLNKTANATIN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ F + A + + + + + +G
Sbjct: 371 GVSQDFFMLKNYKLLSGRFFNQQDVDTYQAVGIIDKKSRDVIFGTKIAESNIVFIGDVPI 430
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
S + + + +++ + I V +++ + IV +
Sbjct: 431 SIIGVVESASQTTEGQRTTIWLPYNTMAARLRNQPYFQQITVQLRENFVPAAADKAIVDL 490
Query: 248 L 248
L
Sbjct: 491 L 491
>gi|42522295|ref|NP_967675.1| macrolide ABC transporter ATP-binding protein [Bdellovibrio
bacteriovorus HD100]
gi|81829284|sp|Q6MPX9|MACB_BDEBA RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|39574826|emb|CAE78668.1| Macrolide specific ABC-type transporter, ATP-binding protein
[Bdellovibrio bacteriovorus HD100]
Length = 650
Score = 48.6 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/231 (11%), Positives = 76/231 (32%), Gaps = 5/231 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S +S +G++IGV A++ ++++ G R+ + K++ + ++++ + V + +
Sbjct: 266 SGLSMLGILIGVAAVVGMLALGTGARQSIEKQLSSLGSNLLVLRAGNVRVGGVMQESGVR 325
Query: 89 FIPDVIKVLPFVSG-----QAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSND 143
+ V + S G L + +
Sbjct: 326 IRISLDDVSTIKNQISGIKDVSPSSSGRGQITYLNKNWNTQVMGVAPAYEQMRASTPIFG 385
Query: 144 FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYD 203
+ + L +G ++ ++ + + VL P
Sbjct: 386 RFFSEEENQRRTLVAVIGTTVARELFGEKSPIGEMIKINKVNFRVIGVLPEKGAAGPQDQ 445
Query: 204 NGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVV 254
+ + + + A N V +++ V+D I + +++ ++ V
Sbjct: 446 DDRILVPVVTAMYRLFGRNYVDSVDIEVRDAADIPEVQDSLQELMNKRHRV 496
>gi|307262306|ref|ZP_07543954.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306867969|gb|EFM99797.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 646
Score = 48.6 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/241 (9%), Positives = 75/241 (31%), Gaps = 6/241 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++A+ + +++ F ++ +G++IG+ A++ V+++ G + ++ + +
Sbjct: 257 SFVMAFSMMRAHKIRTF------LTMLGIIIGIAAVVCVVALGEGTKHKVLNEFSSLGSN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + + DV + + LS + +N+ +
Sbjct: 311 TIDIFPGKNWGDTEAYKIQTLNSNDVNLLRQQPYVKGATPNLSLELPIRFLNKTANATIN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ F + A + + + + + +G
Sbjct: 371 GVSQDFFMLKNYKLLSGRFFNQQDVDTYQAVGIIDKKSRDVIFGTKIAESNIVFIGDVPI 430
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
S + + + +++ + I V +++ + IV +
Sbjct: 431 SIIGVVESASQTTEGQRTTIWLPYNTMAARLRNQPYFQQITVQLRENFVPAAADKAIVDL 490
Query: 248 L 248
L
Sbjct: 491 L 491
>gi|15618173|ref|NP_224458.1| hypothetical protein CPn0249 [Chlamydophila pneumoniae CWL029]
gi|15835784|ref|NP_300308.1| hypothetical protein CPj0249 [Chlamydophila pneumoniae J138]
gi|16752788|ref|NP_445056.1| hypothetical protein CP0512 [Chlamydophila pneumoniae AR39]
gi|4376524|gb|AAD18402.1| CT151 hypothetical protein [Chlamydophila pneumoniae CWL029]
gi|7189429|gb|AAF38340.1| conserved hypothetical protein [Chlamydophila pneumoniae AR39]
gi|8978622|dbj|BAA98459.1| CT151 hypothetical protein [Chlamydophila pneumoniae J138]
Length = 503
Score = 48.6 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 35/250 (14%), Positives = 70/250 (28%), Gaps = 12/250 (4%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+FE VA +YL R + +I S S + + V IV +SV++G + I+ + +
Sbjct: 1 MKFEFSVALKYLIPGRGRLYSAIVSLFSVGIISLVVWLSIVFISVIHGLEQRWIEDLSQL 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + + + S+
Sbjct: 61 --------HSPITILPSDTYYSSYYYQIDKHSSLSNYTTKTLGEKIASPQVDPYDPESDY 112
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
G D + +G L G I + + +
Sbjct: 113 LLPETFPLKDCDLGGQQKDPVKMTLESLGPYLQSQHGKVIEFEQGVGYLDIKTSLKLQKP 172
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAV-SGIEVFVKDPDAIEKTHEN 243
+ ++ T + + D + Y N N SG + +D +E+ +
Sbjct: 173 QPRNLTHFLTYPSKLSYEDKVLPYDETDYTSAELNPFNRSPSGWQ---QDFHHLEELYRG 229
Query: 244 IVRILGNGVV 253
IL +
Sbjct: 230 ASIILPSTYK 239
>gi|325972588|ref|YP_004248779.1| hypothetical protein SpiBuddy_2776 [Spirochaeta sp. Buddy]
gi|324027826|gb|ADY14585.1| protein of unknown function DUF214 [Spirochaeta sp. Buddy]
Length = 411
Score = 48.6 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 32/267 (11%), Positives = 80/267 (29%), Gaps = 15/267 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ ++ +A+R +F N + S +S I + + MA++ +++++ DM +
Sbjct: 1 MTTKLP-ALAFRNIFRNLRR------SSLSAIAIAVSAMAIMALLALLECMEADMQTNLT 53
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
V + ++ L D + L + L
Sbjct: 54 SYYTGEVRIRHESFEKYERYNPLHLSLEVDAVLPLASSVEGVEAATSRINFPANLYLNGK 113
Query: 123 NSDFSYLQNSF---SRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
N+ + F F S + +L ++ ++NI +T
Sbjct: 114 NNGALGVGVDFATEVAFIDFPSLLTEGRIPQEGKNELLIGAILAHELRLNINDKVTVLTS 173
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMV-YMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+ + + + Y+ L AQ + I + V + +
Sbjct: 174 TALRGSNAMTFEIVGIASFPVGGLSSKTLYIPLDRAQYLLRMPGQTQEILLQVAEGFKEQ 233
Query: 239 KTHENIVRILGNGVVVID----WQQRY 261
+ + + +L + + W+
Sbjct: 234 EVAQEVKSLLATSLGLETETKAWKDLN 260
>gi|198276620|ref|ZP_03209151.1| hypothetical protein BACPLE_02816 [Bacteroides plebeius DSM
17135]
gi|198270145|gb|EDY94415.1| hypothetical protein BACPLE_02816 [Bacteroides plebeius DSM
17135]
Length = 406
Score = 48.6 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A+R L +N+ AF ++ +G++IGV ++I ++++ G + + K++ + ++
Sbjct: 7 FKIAFRALANNKLRAF------LTMLGIIIGVASVIAMLAIGQGSKRSIQKQISEMGSNM 60
Query: 69 VIQQK 73
++
Sbjct: 61 IMIHP 65
>gi|256003518|ref|ZP_05428508.1| protein of unknown function DUF214 [Clostridium thermocellum DSM
2360]
gi|281418318|ref|ZP_06249338.1| protein of unknown function DUF214 [Clostridium thermocellum JW20]
gi|255992542|gb|EEU02634.1| protein of unknown function DUF214 [Clostridium thermocellum DSM
2360]
gi|281409720|gb|EFB39978.1| protein of unknown function DUF214 [Clostridium thermocellum JW20]
gi|316941414|gb|ADU75448.1| protein of unknown function DUF214 [Clostridium thermocellum DSM
1313]
Length = 402
Score = 48.6 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 31/244 (12%), Positives = 73/244 (29%), Gaps = 13/244 (5%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A L +N+ S ++ +G+++GV ++I +M++ N E + + I +V+
Sbjct: 10 ALDSLKANKLR------SILTMLGIVMGVFSIITIMAIGNATEEYINSQFEKIGANVLTV 63
Query: 72 QKYYPLVDYQFIAN--RLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
VD + ++ + + V+ G + + + Y
Sbjct: 64 GYKNMNVDSDEMLYLKDIETVKRAAPEIKNVTTYIQHRGTLRIDTKTRSALVYGTTAQYK 123
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
+ + ++++I+ + K
Sbjct: 124 DITPMEMAAGRFFTDFDISSRQKVVVVDEYFAKRYFNRLDIVGEVLQFKAPSGNYKVKVI 183
Query: 190 TVLGMFRMRF-----PDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
V + +YM + Q + A+ I V + ++ I
Sbjct: 184 GVAKAINDAMANLLDNENFPTQIYMPITTVQQMYYNNEALDSILVALDKEVDYKEVGNRI 243
Query: 245 VRIL 248
VR L
Sbjct: 244 VRAL 247
>gi|153806777|ref|ZP_01959445.1| hypothetical protein BACCAC_01049 [Bacteroides caccae ATCC 43185]
gi|149131454|gb|EDM22660.1| hypothetical protein BACCAC_01049 [Bacteroides caccae ATCC 43185]
Length = 406
Score = 48.6 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A R L +N+ AF ++ +G++IGV ++I ++++ G ++ + +++ + ++
Sbjct: 7 FKIALRALANNKLRAF------LTMLGIIIGVASVITMLAIGQGSKKSIQQQISEMGSNM 60
Query: 69 VIQQKYYPL 77
++ +
Sbjct: 61 IMIHPGADM 69
>gi|295084457|emb|CBK65980.1| ABC-type antimicrobial peptide transport system, permease
component [Bacteroides xylanisolvens XB1A]
Length = 406
Score = 48.6 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A R L +N+ AF ++ +G++IGV ++I ++++ G ++ + +++ + ++
Sbjct: 7 FKIALRALANNKLRAF------LTMLGIIIGVASVITMLAIGQGSKKSIQQQISEMGSNM 60
Query: 69 VIQQKYYPL 77
++ +
Sbjct: 61 IMIHPGADM 69
>gi|213964228|ref|ZP_03392461.1| macrolide export ATP-binding/permease protein MacB [Capnocytophaga
sputigena Capno]
gi|213953118|gb|EEB64467.1| macrolide export ATP-binding/permease protein MacB [Capnocytophaga
sputigena Capno]
Length = 406
Score = 48.6 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 27/247 (10%), Positives = 77/247 (31%), Gaps = 13/247 (5%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+AWR L N+ + ++ +G++IGV ++I ++++ G ++ + + + + ++
Sbjct: 7 FKIAWRALLLNKTR------AMLTMLGIIIGVGSVITMLAIGEGSKKSIKENISKMGTNM 60
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + ++ ++ + + + +S SG +++
Sbjct: 61 LNIRPGAGMMGGVRMSMSDMQSLKMTDYEALKKEGSLLKYVSPVVSGNGQSIAGGNNWPT 120
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARN-------LGISIGDKINILSPYGDVTPMG 181
+ Y + + ++ ++ N +P G
Sbjct: 121 SIYGVNTEYLPIREWSVAEGSMFGEDEITNFAKVAVIGQTVAKNLFTNGENPIGQTIRFK 180
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ F + M+ Q + + I V D E
Sbjct: 181 NIPFKVIGILTKKGESNFGQDQDDMIIAPYTTVQKRILTQTFLQSIVASVIDESQSENAV 240
Query: 242 ENIVRIL 248
+ +IL
Sbjct: 241 NQVKKIL 247
>gi|153813135|ref|ZP_01965803.1| hypothetical protein RUMOBE_03544 [Ruminococcus obeum ATCC 29174]
gi|149830790|gb|EDM85880.1| hypothetical protein RUMOBE_03544 [Ruminococcus obeum ATCC 29174]
Length = 411
Score = 48.6 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/247 (11%), Positives = 75/247 (30%), Gaps = 13/247 (5%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A + + +N+ +F ++ +G++IG+ ++I ++S+ G + M + GI +
Sbjct: 8 IKMAVQNIRANKGRSF------LTMLGIIIGIASVIAIVSIGEGTKNQMNSEIDGIGSGL 61
Query: 69 VIQQKYYPLVDYQFIA-----NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ + + + V V + S +L +
Sbjct: 62 IAIDVSNDAMTEDEWITPDDVQEIRKLDTVGGVSVSNNYDGETVTGKGNFSIMLTGEGPD 121
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVII-GKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + Y + + +I D + G +++ D +
Sbjct: 122 AKMINNSDMKYGSYFGETEIEEGKNVCVISDTDARQLFGTDDVVGMSLDITCYDSSKSFR 181
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGI-EVFVKDPDAIEKTH 241
+ + G F D V + + I V +
Sbjct: 182 IMGVTTQKENGTFVSYTYDGMPVTVNVPYSSMDDLVGGTDEFYSITVVQADKTLDSQIVA 241
Query: 242 ENIVRIL 248
+ +V +L
Sbjct: 242 DQVVHLL 248
>gi|125974265|ref|YP_001038175.1| hypothetical protein Cthe_1761 [Clostridium thermocellum ATCC
27405]
gi|125714490|gb|ABN52982.1| protein of unknown function DUF214 [Clostridium thermocellum ATCC
27405]
Length = 402
Score = 48.6 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 31/244 (12%), Positives = 73/244 (29%), Gaps = 13/244 (5%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A L +N+ S ++ +G+++GV ++I +M++ N E + + I +V+
Sbjct: 10 ALDSLKANKLR------SILTMLGIVMGVFSIITIMAIGNATEEYINSQFEKIGANVLTV 63
Query: 72 QKYYPLVDYQFIAN--RLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
VD + ++ + + V+ G + + + Y
Sbjct: 64 GYKNMNVDSDEMLYLKDIETVKRAAPEIKNVTTYIQHRGTLRIDTKTRSALVYGTTAQYK 123
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
+ + ++++I+ + K
Sbjct: 124 DITPMEMAAGRFFTDFDISSRQKVVVVDEYFAKRYFNRLDIVGEVLQFKAPSGNYKVKVI 183
Query: 190 TVLGMFRMRF-----PDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
V + +YM + Q + A+ I V + ++ I
Sbjct: 184 GVAKAINDAMANLLDNENFPTQIYMPITTVQQMYYNNEALDSILVALDKEVDYKEVGNRI 243
Query: 245 VRIL 248
VR L
Sbjct: 244 VRAL 247
>gi|213028666|ref|ZP_03343113.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Typhi str.
404ty]
Length = 239
Score = 48.6 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 30/67 (44%)
Query: 203 DNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQ 262
D+ + L++AQ Y ++ ++VSGI + V D K + + + V + W Y
Sbjct: 25 DHSFAMIPLEDAQQYLDMGSSVSGIALKVHDVFNANKLVRDAGEVTNSYVYIKSWIGTYG 84
Query: 263 IFFSCYE 269
+ +
Sbjct: 85 YMYRDIQ 91
>gi|149923255|ref|ZP_01911666.1| hypothetical protein PPSIR1_04323 [Plesiocystis pacifica SIR-1]
gi|149815912|gb|EDM75431.1| hypothetical protein PPSIR1_04323 [Plesiocystis pacifica SIR-1]
Length = 610
Score = 48.6 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 10/76 (13%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+++ R+ SI S IGV++GV AL+VV SV GF+ + +RVLG+ H+
Sbjct: 127 LISRRF----------SIFGTTSIIGVVLGVAALLVVQSVATGFQHEFERRVLGVYAHIN 176
Query: 70 IQQKYYPLVDYQFIAN 85
+ + + +F A
Sbjct: 177 VTRAFGISEYRRFEAW 192
Score = 46.7 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLY-FNLENAVSGIEVFVKDPD 235
+ Y + G+F+ F +YD+ +VY+ ++E Q + + ++ VSG+++ +++
Sbjct: 374 TFDHSEAPKFVYYRIAGVFQAGFQEYDSRLVYVDIRELQRFKYRGKDIVSGVDLRLREQS 433
Query: 236 AIEKTHENIVRILGNG----VVVIDWQQRYQIFFSCYES 270
+ I + + V++WQ+ + F +
Sbjct: 434 LAPEVGAVIRGAINSPEIAEYSVLEWQKLNENLFDSIRT 472
>gi|255692082|ref|ZP_05415757.1| macrolide export ATP-binding/permease protein MacB [Bacteroides
finegoldii DSM 17565]
gi|260622234|gb|EEX45105.1| macrolide export ATP-binding/permease protein MacB [Bacteroides
finegoldii DSM 17565]
Length = 406
Score = 48.6 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A R L +N+ AF ++ +G++IGV ++I ++++ G ++ + +++ + ++
Sbjct: 7 FKIALRALANNKLRAF------LTMLGIIIGVASVITMLAIGQGSKKSIQQQISEMGSNM 60
Query: 69 VIQQKYYPL 77
++ +
Sbjct: 61 IMIHPGADM 69
>gi|168187204|ref|ZP_02621839.1| ABC transporter, permease [Clostridium botulinum C str. Eklund]
gi|169294880|gb|EDS77013.1| ABC transporter, permease [Clostridium botulinum C str. Eklund]
Length = 394
Score = 48.6 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 28/221 (12%), Positives = 70/221 (31%), Gaps = 2/221 (0%)
Query: 30 FISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDF 89
++ IG+++G+ +LI ++S+ NG +++ + ++ +G I + P D N F
Sbjct: 23 ILTLIGIVLGISSLIAIVSLGNGMGDEIKESIISSDGTRSISLMFTPGEDSSTKENLDAF 82
Query: 90 IPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKG 149
VI + G V S + + + S N S +
Sbjct: 83 NDSVISKIKNTKGVDSVEKEFSSMTQMEIDNKSEMISIQCSNETSNISKDKIITGRTFNK 142
Query: 150 VIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYM 209
+ + + + + + +Y+
Sbjct: 143 KEFSNVSRVCIINKALKDKLFKDNDAIGQIVQVADKPMIVIGVME-ELGASFMSFNSIYI 201
Query: 210 SLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN 250
+ F +++ +++ + I++ + I L N
Sbjct: 202 PRPTWSITFG-DDSAKQLKICITKDYDIKEVSKTIADKLNN 241
>gi|253577615|ref|ZP_04854925.1| ABC transporter [Paenibacillus sp. oral taxon 786 str. D14]
gi|251842985|gb|EES71023.1| ABC transporter [Paenibacillus sp. oral taxon 786 str. D14]
Length = 398
Score = 48.6 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 39/280 (13%), Positives = 87/280 (31%), Gaps = 28/280 (10%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++VA L N+ +F ++ IG++ GV A++ V+S+ + ++ +
Sbjct: 6 SILVALDNLRMNKLRSF------LTMIGIVFGVAAVVTVVSIGQAGQSSIMSEISNYEDG 59
Query: 68 VVIQQKYYPLVDYQFIANR-------LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ Y + + + +P V V S +
Sbjct: 60 YFLIYPNYNNGEPEDNTYFRQRELAEIRKLPGVRYVSSSSSYGMTGKLKKEELQFSITGT 119
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
S+S + + + N + R K +++ A S + +
Sbjct: 120 TSDSPKMQKIDVVAGRFFNSQEERARQKILVVEAKYANKAFGSPQG-----AIGRKIQLS 174
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G R M + Y + + +S +E+ P+ +++T
Sbjct: 175 GGMFRIVGVYKAPESLMSSFGGERYSAYTPITAMLDGEGASDRLSMLEILPTSPERMDET 234
Query: 241 HENIVRILGNGVVV----------IDWQQRYQIFFSCYES 270
E + L + V D +Q + FS ++
Sbjct: 235 VETVKSWLADRKNVSKDAYVTESARDAEQMIKSTFSILQT 274
>gi|289524024|ref|ZP_06440878.1| macrolide efflux ABC transporter, permease/ATP-binding protein
[Anaerobaculum hydrogeniformans ATCC BAA-1850]
gi|289502680|gb|EFD23844.1| macrolide efflux ABC transporter, permease/ATP-binding protein
[Anaerobaculum hydrogeniformans ATCC BAA-1850]
Length = 409
Score = 48.6 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 34/268 (12%), Positives = 92/268 (34%), Gaps = 24/268 (8%)
Query: 3 IFSRFEV-IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+ S E V++R + SN+ S ++ +G++IGV A+I ++++ G + +
Sbjct: 1 MISFVETCRVSFRAIVSNKMR------SGLAMLGIVIGVGAVIAMLALGAGATFQIKSVM 54
Query: 62 LGINGHVVIQQKYYPLVDYQFI----------ANRLDFIPDVIKVLPFVSGQAFVSGLSS 111
+ +++ + + ++ + + ++ + V+ +
Sbjct: 55 SSMGSNLLTIRPGTVTSGGIRMGAGSIPSLTLSDATAIKEECPSIEEVLAQYSGVAQVVY 114
Query: 112 GGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL 171
G + ++ ++ N + G + D + +
Sbjct: 115 GNQNWSTQISGVTEGVFVVNDWQLMLGRPFTEQDIRSAAKVA----ILGTTVAQELFGYS 170
Query: 172 SPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQL-YFNL--ENAVSGIE 228
P G+ + + + + +V + + AQ F + + VS I
Sbjct: 171 DPVGETIRIKNIPFQVIGVLEPKGESSWGRDQDDVVMVPVTTAQKRLFGMPRPDMVSSIT 230
Query: 229 VFVKDPDAIEKTHENIVRILGNGVVVID 256
V VK D +++ E + +L + +
Sbjct: 231 VKVKSEDLMDRAQEEVTLLLRQRHKISN 258
>gi|315224671|ref|ZP_07866494.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Capnocytophaga ochracea F0287]
gi|314945299|gb|EFS97325.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Capnocytophaga ochracea F0287]
Length = 406
Score = 48.6 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 26/247 (10%), Positives = 77/247 (31%), Gaps = 13/247 (5%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+AWR L N+ + ++ +G++IGV ++I ++++ G ++ + + + + ++
Sbjct: 7 FKIAWRALLLNKTR------AMLTMLGIIIGVGSVITMLAIGEGSKKSIKENISKMGTNM 60
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + ++ ++ + + +S SG +++
Sbjct: 61 LNIRPGAGMMGGVRMSMSDMQSLKMTDYEALKKEGTLLKYVSPIVSGNGQSIAGGNNWPT 120
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARN-------LGISIGDKINILSPYGDVTPMG 181
+ Y + + ++ ++ N +P G
Sbjct: 121 SIYGVNTEYLPIREWSVAEGSMFGEDEITNFAKVAVIGQTVAKNLFTNGENPIGQTIRFK 180
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ +F + ++ Q + + I V D E
Sbjct: 181 NIPFKVIGVLTKKGESKFGQDQDDVIIAPYTTVQKRILAQTFLQSIVASVIDESQSENAV 240
Query: 242 ENIVRIL 248
+ +IL
Sbjct: 241 NQVKKIL 247
>gi|310643890|ref|YP_003948648.1| abc transporter, permease protein [Paenibacillus polymyxa SC2]
gi|309248840|gb|ADO58407.1| ABC transporter, permease protein [Paenibacillus polymyxa SC2]
Length = 404
Score = 48.6 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 38/239 (15%), Positives = 81/239 (33%), Gaps = 13/239 (5%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
L +N+ +F ++ +G++IGV A+I +M++ NG + + + + + +V++
Sbjct: 14 LTTNKMRSF------LTILGIIIGVAAVIAIMAIGNGSKASIKEEINKLGNNVLLVAPVM 67
Query: 76 PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSR 135
P+ + + + L S G N + + + S S
Sbjct: 68 PMTEEEINQDTLPSFTWTDVEALEQKSSIAAMMPRISNSSKAAWGRYNYNATIVGTSASF 127
Query: 136 FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTV---- 191
+ + + D RN+ I L +G I+ K
Sbjct: 128 YKAKKFSFAEGRTFTNDEMDKRRNVAILESQAAVRLFGGDTQNVLGRTIQIKQIPFKVIG 187
Query: 192 --LGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
N +Y+ +N ++G+EV K P + + +I+ L
Sbjct: 188 VLNTQPVTNLSYSTNDQIYIPATTMMNRLGEKN-ITGLEVSAKSPGLMGQAQSDILESL 245
>gi|170755271|ref|YP_001780846.1| putative ABC transporter, permease protein [Clostridium botulinum
B1 str. Okra]
gi|169120483|gb|ACA44319.1| putative ABC transporter, permease protein [Clostridium botulinum
B1 str. Okra]
Length = 427
Score = 48.6 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 31/284 (10%), Positives = 77/284 (27%), Gaps = 39/284 (13%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL-------- 62
+ WR L + F ++ +GV+IG +A+ V++S+ NGF + M ++
Sbjct: 9 IIWRNLLKRKGRTF------LTMLGVIIGSIAIYVIISLGNGFEKYMSSQLNSFGDVNII 62
Query: 63 ----GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
+ Q L + + V + + ++ S +
Sbjct: 63 NIFPYSDSTTTYQGGNIKNRKKILNDKTLKELNKLEFVKYSIPKLNTNADIAYKKSEMKS 122
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRG--KGVIIGKDLARNLGISIGDKINILSPYGD 176
++ F +G ND G + L + + I
Sbjct: 123 SNLTGMSFKNYSKDHELLFGKYPNDSKNEVVIGYKLAAYLINKKDVDNIKEEEIKKILRK 182
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY----------------MSLQEAQLYFNL 220
+ + ++ + ++ + F
Sbjct: 183 KLKVKVSRPNEKGEEEWTTYTVKVSGICKENFSDDYQIKAPLSFTKDILTYKNNNENFLK 242
Query: 221 ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIF 264
I++ +K + + + + NG + ++
Sbjct: 243 NKGYESIDLVLKSQEKSSQAEKYLKD---NGYLYQSLKEMQNSI 283
>gi|320109210|ref|YP_004184800.1| hypothetical protein AciPR4_4057 [Terriglobus saanensis SP1PR4]
gi|319927731|gb|ADV84806.1| protein of unknown function DUF214 [Terriglobus saanensis SP1PR4]
Length = 409
Score = 48.6 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 27/238 (11%), Positives = 71/238 (29%), Gaps = 17/238 (7%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +A + L++N+ + ++ +GVMIGV ++I V++++NG + +++
Sbjct: 1 MDLKEAFKLALQSLWANKLR------TVLTLLGVMIGVASVIAVVTLVNGANAYVDQKLN 54
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
V K + + +V + G +
Sbjct: 55 TFGSDVFTVSKQPTAITSFEDYTKFQKRKNVQVDAYRWLVEQCHKCALIGVQQTTRGTVK 114
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S S + + + + + + I +
Sbjct: 115 FSTESVTDVALRGWTSGMPVLNNLDIAQGRTFTQSEEDHSAHVAIIGTDIQENLLKSEDP 174
Query: 183 GIRSKSYTVLGMFRM--------RFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK 232
+ + + + V + L Q + L+ +V+ +F+K
Sbjct: 175 IGKEIRVDGVPYTVVGVGAKQGKTLGQSQDNWVAVPLPAFQRSYGLQKSVT---IFLK 229
>gi|284047616|ref|YP_003397955.1| protein of unknown function DUF214 [Acidaminococcus fermentans DSM
20731]
gi|283951837|gb|ADB46640.1| protein of unknown function DUF214 [Acidaminococcus fermentans DSM
20731]
Length = 404
Score = 48.6 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/253 (11%), Positives = 88/253 (34%), Gaps = 12/253 (4%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A+ + +N+ F ++ +G++IGV A+I ++S+ G +E + + + + +++
Sbjct: 7 KMAFEGMLANKIRTF------LTMLGIIIGVGAVIAMVSLGLGMQEKVKENITSMGSNLL 60
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
I + Q IA+ + ++ G N +++
Sbjct: 61 IVMSGGRTANGQRIASGSGAKLTYEDAKAIEKNVDGIKYVAPGVQNSYQLVAGNQNWTSQ 120
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
+ ++ + + +D+ + + K + + D +G +R
Sbjct: 121 VQGVTPNILSIRSYSIEQGRMYSQRDMNSRERVCVIGKTVADTLFPDGNAVGQIMRINKA 180
Query: 190 TVLG------MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ + +V++ L A + I + ++ + + + +
Sbjct: 181 PFTVIGVLASKGQSAMGQDQDDIVFVPLTTAMQRLMGLTYIRNITIQCENENTVSQVQSD 240
Query: 244 IVRILGNGVVVID 256
+V +L +
Sbjct: 241 VVTLLRTRHKIKT 253
>gi|298374295|ref|ZP_06984253.1| macrolide export ATP-binding/permease protein MacB [Bacteroides
sp. 3_1_19]
gi|298268663|gb|EFI10318.1| macrolide export ATP-binding/permease protein MacB [Bacteroides
sp. 3_1_19]
Length = 406
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A R L +N+ F ++ +G++IGV ++I ++++ G + + ++ + ++
Sbjct: 7 LKIALRALANNKLRGF------LTMLGIIIGVASVITMLAIGQGSKRSIQAQISEMGSNM 60
Query: 69 VIQQKYYPL 77
++ Q +
Sbjct: 61 IMIQPGADM 69
>gi|262382758|ref|ZP_06075895.1| ABC transporter permease [Bacteroides sp. 2_1_33B]
gi|262295636|gb|EEY83567.1| ABC transporter permease [Bacteroides sp. 2_1_33B]
Length = 406
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A R L +N+ F ++ +G++IGV ++I ++++ G + + ++ + ++
Sbjct: 7 LKIALRALANNKLRGF------LTMLGIIIGVASVITMLAIGQGSKRSIQAQISEMGSNM 60
Query: 69 VIQQKYYPL 77
++ Q +
Sbjct: 61 IMIQPGADM 69
>gi|240949184|ref|ZP_04753530.1| putative macrolide-specific ABC-type efflux carrier [Actinobacillus
minor NM305]
gi|240296416|gb|EER47056.1| putative macrolide-specific ABC-type efflux carrier [Actinobacillus
minor NM305]
Length = 587
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 21/241 (8%), Positives = 75/241 (31%), Gaps = 7/241 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A +F+++ + ++ +G++IG+ ++I V+++ G +E ++ + + +
Sbjct: 199 SFKMAISAIFAHKLR------ALLTMLGIVIGITSVISVVALGRGSQEQILANINSLGTN 252
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + + I D + + + + + +
Sbjct: 253 TMTIMNGTGFGDRRANLTKNLTISDAAMLAKQPYVDSTTPSSNLSATVIYGNTNVTGSVN 312
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ + G + + K ++ + + +
Sbjct: 313 GVGEQYLNVKGMKMISGRFFSADEVTNAAQVIVIDQNTRK-DLGLAMPVEGKILLVDKKP 371
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ + + ++ + E ++ + V VKD + ++I +
Sbjct: 372 LQIIGLAEESNNMNQTSLKLWTPYTTLMQRISGEKSIDSLTVKVKDDVESQTAEKSITEL 431
Query: 248 L 248
L
Sbjct: 432 L 432
>gi|302130092|ref|ZP_07256082.1| macrolide ABC efflux protein [Pseudomonas syringae pv. tomato NCPPB
1108]
Length = 656
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 36/243 (14%), Positives = 89/243 (36%), Gaps = 18/243 (7%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +++
Sbjct: 272 AWRVMWVNR------FRTALTLLGIVIGVASVVVMLAVGEGSKRQVMAQMSSFGSNIIYL 325
Query: 72 QKYYPLVDYQFIANRLD------FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
P L+ +P+V ++P GQA V + S + ++
Sbjct: 326 NGKAPNPRAPKGVITLEEVAALGELPEVKMIMPVNGGQAGVRFGNVDHSSYVGGNDTHFP 385
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ Y + +++ +IG + + L D I +V +G+
Sbjct: 386 AIFNWPVAEGSYFSEADEQGAAAVAVIGYKVRQKLFGDRIDPIGQYILIENVPFQVVGVL 445
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ G + F ++ I + +D + +++ I
Sbjct: 446 QEKGATSGDLDSDNRIAIP-----YSSASIRLFGSQDPE-YITIATRDANNVKQAEAAIR 499
Query: 246 RIL 248
+L
Sbjct: 500 TLL 502
>gi|253990329|ref|YP_003041685.1| macrolide transporter ATP-binding /permease protein [Photorhabdus
asymbiotica subsp. asymbiotica ATCC 43949]
gi|253781779|emb|CAQ84942.1| macrolide-specific abc-type efflux carrier protein macb
[Photorhabdus asymbiotica]
Length = 647
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 29/250 (11%), Positives = 84/250 (33%), Gaps = 10/250 (4%)
Query: 3 IFSRF--EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
IF RF +++AWR + +N+ + ++ +G++IG+ +++ ++ + + + ++
Sbjct: 249 IFGRFNEALLMAWRAMVANKMR------TLLTMLGIIIGIASVVTILVIGDAAKALVLSD 302
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ I + + ++ + I DV + A + G
Sbjct: 303 IKEIATNTISVYPGEDFGSDDPVSKQALKIADVDAIKAQPYILAVSPVIEGGMRLRKGNI 362
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ S + + + + Y ++ + + + + +
Sbjct: 363 DVAARVSGIGDEYFQVYAQRFAQGMNFTSDMVRRQGQVVVIDKNTQRKLFPHQKNVIGEV 422
Query: 181 GMGIRSKSYTVLGMFR--MRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+ + V + F + V++ N + I V + D +
Sbjct: 423 ILMGNMPATIVGVIAERKSAFGSDSSLHVWLPYSTMASRLMNRNYLDSITVRINDGHNSK 482
Query: 239 KTHENIVRIL 248
+ IV++L
Sbjct: 483 DAEQKIVQLL 492
>gi|241766612|ref|ZP_04764464.1| protein of unknown function DUF214 [Acidovorax delafieldii 2AN]
gi|241363122|gb|EER58735.1| protein of unknown function DUF214 [Acidovorax delafieldii 2AN]
Length = 401
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 32/260 (12%), Positives = 89/260 (34%), Gaps = 12/260 (4%)
Query: 14 RYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQK 73
R + N +F ++ +G++IGV A+I ++++ NG + ++ G+ +++ +
Sbjct: 11 RSIRRNLMRSF------LTILGIVIGVSAVITMVTLGNGATMAVQNQISGLGTNLLQVRP 64
Query: 74 YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSF 133
+ D + + G V+ + + V+ G + + +
Sbjct: 65 GQRMGPGGGSGAPAFKDTDADTIAQQIGGILAVAPEARASATVVAGGRNWTTSIIGSTNA 124
Query: 134 SRFYGNV---SNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
GN + + G + + + G+ +
Sbjct: 125 WLQTGNWAVRTGRVFSEAELRAGAAVCLIGETVRRELYGMRDAVGEQLRVKAFSCEVVGV 184
Query: 191 VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN 250
+ + F + + V + L+ Q V+ + V ++D E+ ++ ++L
Sbjct: 185 LASKGQGAFGNDQDDTVLVPLRTLQRRVTGNTRVNTLLVSMQDGSDPERVKASLTQLLRE 244
Query: 251 GVVVIDWQQRYQIFFSCYES 270
+ D + F+ ++
Sbjct: 245 LRKLSDTDEDN---FNVLDT 261
>gi|213970447|ref|ZP_03398575.1| macrolide ABC efflux protein [Pseudomonas syringae pv. tomato T1]
gi|301385861|ref|ZP_07234279.1| macrolide ABC efflux protein [Pseudomonas syringae pv. tomato
Max13]
gi|302059248|ref|ZP_07250789.1| macrolide ABC efflux protein [Pseudomonas syringae pv. tomato K40]
gi|213924765|gb|EEB58332.1| macrolide ABC efflux protein [Pseudomonas syringae pv. tomato T1]
Length = 656
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 36/243 (14%), Positives = 89/243 (36%), Gaps = 18/243 (7%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +++
Sbjct: 272 AWRVMWVNR------FRTALTLLGIVIGVASVVVMLAVGEGSKRQVMAQMSSFGSNIIYL 325
Query: 72 QKYYPLVDYQFIANRLD------FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
P L+ +P+V ++P GQA V + S + ++
Sbjct: 326 NGKAPNPRAPKGVITLEEVAALGELPEVKMIMPVNGGQAGVRFGNVDHSSYVGGNDTHFP 385
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ Y + +++ +IG + + L D I +V +G+
Sbjct: 386 AIFNWPVAEGSYFSEADEQGAAAVAVIGYKVRQKLFGDRIDPIGQYILIENVPFQVVGVL 445
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ G + F ++ I + +D + +++ I
Sbjct: 446 QEKGATSGDLDSDNRIAIP-----YSSASIRLFGSQDPE-YITIATRDANNVKQAEAAIR 499
Query: 246 RIL 248
+L
Sbjct: 500 TLL 502
>gi|28869362|ref|NP_791981.1| macrolide ABC efflux protein [Pseudomonas syringae pv. tomato str.
DC3000]
gi|81840220|sp|Q884D4|MACB1_PSESM RecName: Full=Macrolide export ATP-binding/permease protein MacB 1
gi|28852603|gb|AAO55676.1| macrolide ABC efflux protein [Pseudomonas syringae pv. tomato str.
DC3000]
gi|331018637|gb|EGH98693.1| macrolide ABC efflux protein [Pseudomonas syringae pv. lachrymans
str. M302278PT]
Length = 656
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 36/243 (14%), Positives = 89/243 (36%), Gaps = 18/243 (7%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +++
Sbjct: 272 AWRVMWVNR------FRTALTLLGIVIGVASVVVMLAVGEGSKRQVMAQMSSFGSNIIYL 325
Query: 72 QKYYPLVDYQFIANRLD------FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
P L+ +P+V ++P GQA V + S + ++
Sbjct: 326 NGKAPNPRAPKGVITLEEVAALGELPEVKMIMPVNGGQAGVRFGNVDHSSYVGGNDTHFP 385
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ Y + +++ +IG + + L D I +V +G+
Sbjct: 386 AIFNWPVAEGSYFSEADEQGAAAVAVIGYKVRQKLFGDRIDPIGQYILIENVPFQVVGVL 445
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ G + F ++ I + +D + +++ I
Sbjct: 446 QEKGATSGDLDSDNRIAIP-----YSSASIRLFGSQDPE-YITIATRDANNVKQAEAAIR 499
Query: 246 RIL 248
+L
Sbjct: 500 TLL 502
>gi|254228893|ref|ZP_04922315.1| efflux ABC transporter, permease protein [Vibrio sp. Ex25]
gi|262396760|ref|YP_003288613.1| ABC-type transport system involved in lipoprotein release permease
component [Vibrio sp. Ex25]
gi|151938570|gb|EDN57406.1| efflux ABC transporter, permease protein [Vibrio sp. Ex25]
gi|262340354|gb|ACY54148.1| ABC-type transport system involved in lipoprotein release permease
component [Vibrio sp. Ex25]
Length = 411
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 39/270 (14%), Positives = 88/270 (32%), Gaps = 26/270 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +AWR L+ N+ + I ++ G+M ++ ++ MNG + MIK +
Sbjct: 3 IKLAWRNLWRNKLR------TSIMLGAMVFGLMGVVAMIGFMNGLVDSMIKNAIAWQTSH 56
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI------- 121
+ + L + ++ + +A + + G R
Sbjct: 57 LQVHQKSYLNNPDLSDTITNYQTITAALAAHQDVKAVSARFLADGMIASARSTRGVRING 116
Query: 122 -SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + S + +++ + A L + +G K+ +
Sbjct: 117 INVEQEQSITPLKSHVIDGEWLNEVGRNPILVSQKTANRLKLRVGSKVVLTLSDIKGDVS 176
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKD-----PD 235
G R + F+ +D+G VY+ + + L I V + +
Sbjct: 177 GAAFRVRGI-----FKTPSTTFDDGNVYVRKVDLETIAGLSG-AHEIGVLLNSNETEQLE 230
Query: 236 AIEKTHENIVRILG-NGVVVIDWQQRYQIF 264
+ E +I+ +VV WQ+ +
Sbjct: 231 SAEAFTLSILPQANREQLVVRKWQEIQPLL 260
>gi|271499376|ref|YP_003332401.1| ABC transporter-like protein [Dickeya dadantii Ech586]
gi|270342931|gb|ACZ75696.1| ABC transporter related protein [Dickeya dadantii Ech586]
Length = 654
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 26/256 (10%), Positives = 78/256 (30%), Gaps = 8/256 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A R + + R F ++ +G++IG+ +++ V+++ G ++ ++ + +
Sbjct: 264 AFRMALRAMNAQRMRTF------LTMLGIIIGIASVVSVVALGKGSQQQVLAHINAMGTS 317
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + A + D+ + + +S+ + + +
Sbjct: 318 TLEIFPGKDFGDMRSAAIQTLRSHDLSPLEQQPYIHSVTPTVSTSATLRYANNAVSVSVN 377
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ F G + + + + + +
Sbjct: 378 GVGEQFFTVRGYTLSQGSGFSPLSVERLTQEAVIDQNTRDTLFPHGENPLGQVIFLDQLP 437
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ V + F +N +++ ++ + I V VKD + + I
Sbjct: 438 CRIIGVATRKQSGFGSDENLNIWVPYTTVMRRMVGQSYLRSITVRVKDNIDLSVAQQGIT 497
Query: 246 RILGNGVVVIDWQQRY 261
+ L D+
Sbjct: 498 QTLTRQHGSKDFFVMN 513
>gi|255008655|ref|ZP_05280781.1| putative permease component of ABC transporter [Bacteroides
fragilis 3_1_12]
gi|313146389|ref|ZP_07808582.1| ABC transporter [Bacteroides fragilis 3_1_12]
gi|313135156|gb|EFR52516.1| ABC transporter [Bacteroides fragilis 3_1_12]
Length = 406
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A R L +N+ AF ++ +G++IGV ++I ++++ G ++ + ++ + ++
Sbjct: 7 FKIALRALNNNKLRAF------LTMLGIIIGVASVITMLAIGQGSKKSIQAQISEMGSNM 60
Query: 69 VIQQKYYPL 77
++ +
Sbjct: 61 IMIHPGADM 69
>gi|29346625|ref|NP_810128.1| ABC transporter permease [Bacteroides thetaiotaomicron VPI-5482]
gi|253568013|ref|ZP_04845424.1| ABC transporter [Bacteroides sp. 1_1_6]
gi|29338522|gb|AAO76322.1| ABC transporter, permease protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|251842086|gb|EES70166.1| ABC transporter [Bacteroides sp. 1_1_6]
Length = 406
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A R L +N+ AF ++ +G++IGV ++I ++++ G + + +++ + ++
Sbjct: 7 FKIALRALANNKLRAF------LTMLGIIIGVASVITMLAIGQGSKRSIQQQISEMGSNM 60
Query: 69 VIQQK 73
++
Sbjct: 61 IMIHP 65
>gi|301307818|ref|ZP_07213774.1| macrolide export ATP-binding/permease protein MacB [Bacteroides
sp. 20_3]
gi|300834161|gb|EFK64775.1| macrolide export ATP-binding/permease protein MacB [Bacteroides
sp. 20_3]
Length = 406
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A R L +N+ F ++ +G++IGV ++I ++++ G + + ++ + ++
Sbjct: 7 LKIALRALANNKLRGF------LTMLGIIIGVASVITMLAIGQGSKRSIQAQISEMGSNM 60
Query: 69 VIQQKYYPL 77
++ Q +
Sbjct: 61 IMIQPGADM 69
>gi|295101337|emb|CBK98882.1| ABC-type antimicrobial peptide transport system, permease component
[Faecalibacterium prausnitzii L2-6]
Length = 400
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 35/254 (13%), Positives = 79/254 (31%), Gaps = 17/254 (6%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A + + SN+ F ++ +G++IGVMA+IV++ + NG M + +
Sbjct: 6 FKQAVQNVLSNKVRTF------LTMLGIIIGVMAVIVIVGLGNGMTHMMQDFYSDMGSDI 59
Query: 69 V---IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+ I V+ + ++ P+ K L ++ + +G ++
Sbjct: 60 LAVNIMTASTRSVEVNDVYRIINEKPEYYKGLSPIASAGSDTLRVAGEKYRRTYISGVNE 119
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
N++ G D I + R
Sbjct: 120 DYTTINNYKVAKGRGIQYTDLIDNKNI----CVIGDYVDRRIFGGNGLGSTLKVGASEYR 175
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK----TH 241
+ N + + + N ++VS V ++D D ++
Sbjct: 176 IVGVLEGRSRPAAQYEGGNDDIVLIPYTTLMSVNNTSSVSQYYVVLQDADHSDEAQEYMQ 235
Query: 242 ENIVRILGNGVVVI 255
++I +++ V
Sbjct: 236 KSIKKLVSKDDYVY 249
>gi|266625025|ref|ZP_06117960.1| macrolide export ATP-binding/permease protein MacB [Clostridium
hathewayi DSM 13479]
gi|288863080|gb|EFC95378.1| macrolide export ATP-binding/permease protein MacB [Clostridium
hathewayi DSM 13479]
Length = 392
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 27/259 (10%), Positives = 67/259 (25%), Gaps = 13/259 (5%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + + SN+ +F ++ +G++IGV ++I+++ ++ G + + +
Sbjct: 4 SFKMAIKNIMSNKMRSF------LTMLGIIIGVASVIILVGLVEGQMNYIRASFSDMGTN 57
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ Q + F +S Q V + L R +
Sbjct: 58 QLQVQLTNTPTRSVSPQDLYAFYDKNRAYFKEMSPQVSVKATIKHKTDKLTRTRISGVSE 117
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
++ + + + V G ++
Sbjct: 118 QFYGIDAKKLEAGRYIQYSDIASRQSVCVLGYFTATRLFGSAEAAVGESVRFDGNVVKVV 177
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ + A L N VS + V + I +
Sbjct: 178 GVLKRRDKDELKQGGPDDRALLPYTTA-LLMNQNADVSDYIITVDKVEEITAARILLTVF 236
Query: 248 L------GNGVVVIDWQQR 260
L + + +
Sbjct: 237 LQGRYKSPDYFYISSMSEM 255
>gi|256838713|ref|ZP_05544223.1| ABC transporter permease [Parabacteroides sp. D13]
gi|256739632|gb|EEU52956.1| ABC transporter permease [Parabacteroides sp. D13]
Length = 406
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A+R L +N+ F ++ +G++IGV ++I ++++ G + + ++ + ++
Sbjct: 7 LKIAFRALANNKLRGF------LTMLGIIIGVASVITMLAIGQGSKRSIQAQISEMGSNM 60
Query: 69 VIQQKYYPL 77
++ Q +
Sbjct: 61 IMIQPGADM 69
>gi|168178646|ref|ZP_02613310.1| putative ABC transporter, permease protein [Clostridium botulinum
NCTC 2916]
gi|182671089|gb|EDT83063.1| putative ABC transporter, permease protein [Clostridium botulinum
NCTC 2916]
Length = 427
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 31/284 (10%), Positives = 77/284 (27%), Gaps = 39/284 (13%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL-------- 62
+ WR L + F ++ +GV+IG +A+ V++S+ NGF + M ++
Sbjct: 9 IIWRNLLKRKGRTF------LTMLGVIIGSIAIYVIISLGNGFEKYMSSQLNSFGDVNII 62
Query: 63 ----GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
+ Q L + + V + + ++ S +
Sbjct: 63 NIFPYSDSTTTYQGGNIKNRKKILNDKTLKELNKLEFVKYSIPKLNTNADIAYKKSEMKS 122
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRG--KGVIIGKDLARNLGISIGDKINILSPYGD 176
++ F +G ND G + L + + I
Sbjct: 123 SNLTGMSFKNYSKDHELLFGKYPNDSKNEVVIGYKLAAYLINKKDVDNVKEEEIKKILRK 182
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY----------------MSLQEAQLYFNL 220
+ + ++ + ++ + F
Sbjct: 183 KLKVKVSRPNEEGEEEWTTYTVKVSGICKENFSDDYQIKAPLSFTKDILTYKNNDENFLK 242
Query: 221 ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIF 264
I++ +K + + + + NG + ++
Sbjct: 243 NKGYESIDLVLKSQEKSSQAEKYLKD---NGYLYQSLKEMQNSI 283
>gi|150009938|ref|YP_001304681.1| ABC transporter permease [Parabacteroides distasonis ATCC 8503]
gi|255012815|ref|ZP_05284941.1| ABC transporter permease protein [Bacteroides sp. 2_1_7]
gi|149938362|gb|ABR45059.1| ABC transporter permease protein [Parabacteroides distasonis ATCC
8503]
Length = 406
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A R L +N+ F ++ +G++IGV ++I ++++ G + + ++ + ++
Sbjct: 7 LKIALRALANNKLRGF------LTMLGIIIGVASVITMLAIGQGSKRSIQAQISEMGSNM 60
Query: 69 VIQQKYYPL 77
++ Q +
Sbjct: 61 IMIQPGADM 69
>gi|325290109|ref|YP_004266290.1| protein of unknown function DUF214 [Syntrophobotulus glycolicus DSM
8271]
gi|324965510|gb|ADY56289.1| protein of unknown function DUF214 [Syntrophobotulus glycolicus DSM
8271]
Length = 390
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 28/249 (11%), Positives = 89/249 (35%), Gaps = 11/249 (4%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ ++W + N+ +F ++ +G++IGV ++I +++++ G + + +V + +
Sbjct: 5 SIKMSWVNIIHNKLRSF------LTMLGIVIGVASIIALITIVKGATDSIGNQVTELGAN 58
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+I + + + + + + + + + + + + +
Sbjct: 59 KIIITATGTPLKQGLSQDDIANLSLIENISGISPSISGKTAIEYHQTVLDHVTVQGKNEV 118
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
Y + + + L G +I ++ + D G+
Sbjct: 119 YFKTDTKLLNSGRPINILDLENKNRVVIL----GSNIVQELFYGANPLDKNLTINGLDYT 174
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
L + N +V + A ++N ++ ++VF+ D + ++T ++ +
Sbjct: 175 IIGTLAASSGFSMNSTNDLVIIPYTTALSTLGVKN-ITNLDVFLIDTNLADQTVLDLKGV 233
Query: 248 LGNGVVVID 256
L D
Sbjct: 234 LNPAFNYKD 242
>gi|153940883|ref|YP_001390572.1| putative ABC transporter, permease protein [Clostridium botulinum F
str. Langeland]
gi|152936779|gb|ABS42277.1| putative ABC transporter, permease protein [Clostridium botulinum F
str. Langeland]
gi|295318651|gb|ADF99028.1| putative ABC transporter, permease protein [Clostridium botulinum F
str. 230613]
Length = 427
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 31/284 (10%), Positives = 77/284 (27%), Gaps = 39/284 (13%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL-------- 62
+ WR L + F ++ +GV+IG +A+ V++S+ NGF + M ++
Sbjct: 9 IIWRNLLKRKGRTF------LTMLGVIIGSIAIYVIISLGNGFEKYMSSQLNSFGDVNII 62
Query: 63 ----GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
+ Q L + + V + + ++ S +
Sbjct: 63 NIFPYSDSTTTYQGGNIKNRKKILNDKTLKELNKLEFVKYSIPKLNTNADIAYKKSEMKS 122
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRG--KGVIIGKDLARNLGISIGDKINILSPYGD 176
++ F +G ND G + L + + I
Sbjct: 123 SNLTGMSFKNYSKDHELLFGKYPNDSKNEVVIGYKLAAYLINKKDVDNVKEEEIKKILRK 182
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY----------------MSLQEAQLYFNL 220
+ + ++ + ++ + F
Sbjct: 183 KLKVKVSRPNEKGEEEWTTYTVKVSGICKENFSDDYQIKAPLSFTKDILTYKNNDENFLK 242
Query: 221 ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIF 264
I++ +K + + + + NG + ++
Sbjct: 243 NKGYESIDLVLKSQEKSSQAEKYLKD---NGYLYQSLKEMQNSI 283
>gi|170725790|ref|YP_001759816.1| hypothetical protein Swoo_1429 [Shewanella woodyi ATCC 51908]
gi|169811137|gb|ACA85721.1| protein of unknown function DUF214 [Shewanella woodyi ATCC 51908]
Length = 411
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 42/263 (15%), Positives = 86/263 (32%), Gaps = 23/263 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNG-----------FREDM 57
+AWR L+ ++ ++ + + + + S+ G F +
Sbjct: 3 FKLAWRNLWRQKRRTLLTALALSLAL------FLSLFMRSMQEGSYENNIDNSARFSTGL 56
Query: 58 IKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVL 117
++ + + I ++ S GV+
Sbjct: 57 LQLQNPEFSESQSIEDLLSAATDFIAPVTAPPLSPHITHYLPRIESFALASASERAKGVM 116
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
V G+ + D D + V++G+ LA+ L I +GD++ +
Sbjct: 117 VFGVEPEREDSYSGIADKLIAGEFIDADDKQ-VLVGEGLAQFLSIKVGDELVLYGQGYRG 175
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
+ K DN +VYM ++ AQ ++ V+ + DA+
Sbjct: 176 QTAAGLYKVKGI-----IHFPLAAMDNQLVYMPIKLAQTLYSTGEQVTSWVLHTDSLDAV 230
Query: 238 EKTHENIVRILGNGVVVIDWQQR 260
+ +V++ G+ V V DWQQ
Sbjct: 231 AEIKSELVKVFGSKVNVRDWQQL 253
>gi|53713160|ref|YP_099152.1| ABC transporter permease [Bacteroides fragilis YCH46]
gi|60681422|ref|YP_211566.1| putative ABC transporter permease [Bacteroides fragilis NCTC
9343]
gi|253566827|ref|ZP_04844279.1| ABC transporter permease [Bacteroides sp. 3_2_5]
gi|265763255|ref|ZP_06091823.1| ABC transporter permease [Bacteroides sp. 2_1_16]
gi|52216025|dbj|BAD48618.1| ABC transporter permease protein [Bacteroides fragilis YCH46]
gi|60492856|emb|CAH07631.1| putative permease component of ABC transporter [Bacteroides
fragilis NCTC 9343]
gi|251944390|gb|EES84879.1| ABC transporter permease [Bacteroides sp. 3_2_5]
gi|263255863|gb|EEZ27209.1| ABC transporter permease [Bacteroides sp. 2_1_16]
gi|301162881|emb|CBW22428.1| putative permease component of ABC transporter [Bacteroides
fragilis 638R]
Length = 406
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A R L +N+ AF ++ +G++IGV ++I ++++ G ++ + ++ + ++
Sbjct: 7 FKIALRALNNNKLRAF------LTMLGIIIGVASVITMLAIGQGSKKSIQAQISEMGSNM 60
Query: 69 VIQQKYYPL 77
++ +
Sbjct: 61 IMIHPGADM 69
>gi|254524441|ref|ZP_05136496.1| macrolide export ATP-binding/permease protein MacB
[Stenotrophomonas sp. SKA14]
gi|219722032|gb|EED40557.1| macrolide export ATP-binding/permease protein MacB
[Stenotrophomonas sp. SKA14]
Length = 652
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 38/243 (15%), Positives = 85/243 (34%), Gaps = 9/243 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + ++R F ++ +G++IG+ +++ V+++ NG ++ +++ + + +
Sbjct: 262 AFRMALLAMNAHRLRTF------LTMLGIIIGIASVVSVVALGNGSQQQILQNISALGTN 315
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + + D + + +S+ + S + S
Sbjct: 316 TIDVYPGRGFGDMRSARVQTLKASDADALAKQSYVDSATPSVSTSVTARYRNQSSTAQVS 375
Query: 128 YLQNSFSRFYGNV--SNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ F R G S F V +A + + P G V +G
Sbjct: 376 GVGEQFFRVKGVTLLSGSFFDADAVKGLGQVAVIDENTQTQFFPDVDPVGQVILLGNVPA 435
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ V F + V++ ++ VS I V V D ++ E I
Sbjct: 436 -RVVGVAKRQSFGFGGSTSLSVWVPYTTVMSRMLGQSHVSSITVRVDDSTPMDAAQEAIT 494
Query: 246 RIL 248
R+L
Sbjct: 495 RLL 497
>gi|293372966|ref|ZP_06619335.1| efflux ABC transporter, permease protein [Bacteroides ovatus SD
CMC 3f]
gi|292632034|gb|EFF50643.1| efflux ABC transporter, permease protein [Bacteroides ovatus SD
CMC 3f]
Length = 406
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A R L +N+ AF ++ +G++IGV ++I ++++ G ++ + +++ + ++
Sbjct: 7 LKIALRALANNKLRAF------LTMLGIIIGVASVITMLAIGQGSKKSIQQQISEMGSNM 60
Query: 69 VIQQKYYPL 77
+I +
Sbjct: 61 IIIHPGADM 69
>gi|153931699|ref|YP_001383580.1| putative ABC transporter, permease protein [Clostridium botulinum A
str. ATCC 19397]
gi|153935886|ref|YP_001387129.1| putative ABC transporter, permease protein [Clostridium botulinum A
str. Hall]
gi|152927743|gb|ABS33243.1| putative ABC transporter, permease protein [Clostridium botulinum A
str. ATCC 19397]
gi|152931800|gb|ABS37299.1| putative ABC transporter, permease protein [Clostridium botulinum A
str. Hall]
gi|322805540|emb|CBZ03105.1| ABC transporter, permease protein [Clostridium botulinum H04402
065]
Length = 427
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 31/284 (10%), Positives = 77/284 (27%), Gaps = 39/284 (13%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL-------- 62
+ WR L + F ++ +GV+IG +A+ V++S+ NGF + M ++
Sbjct: 9 IIWRNLLKRKGRTF------LTMLGVIIGSIAIYVIISLGNGFEKYMSSQLNSFGDVNII 62
Query: 63 ----GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
+ Q L + + V + + ++ S +
Sbjct: 63 NIFPYSDSTTTYQGGNIKNRKKILNDKTLKELNKLEFVKYSIPKLNTNADIAYKKSEMKS 122
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRG--KGVIIGKDLARNLGISIGDKINILSPYGD 176
++ F +G ND G + L + + I
Sbjct: 123 SNLTGMSFKNYSKDHELLFGKYPNDSKNEVVIGYRLAAYLINKKDVDNVKEEEIKKILRK 182
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY----------------MSLQEAQLYFNL 220
+ + ++ + ++ + F
Sbjct: 183 KLKVKVSRPNEKSEEEWTTYTVKVSGICKENFSDDYQIKAPLSFTKDILTYKNNDENFLK 242
Query: 221 ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIF 264
I++ +K + + + + NG + ++
Sbjct: 243 NKGYESIDLVLKSQEKSSQAEKYLKD---NGYLYQSLKEMQNSI 283
>gi|160889737|ref|ZP_02070740.1| hypothetical protein BACUNI_02167 [Bacteroides uniformis ATCC
8492]
gi|156860729|gb|EDO54160.1| hypothetical protein BACUNI_02167 [Bacteroides uniformis ATCC
8492]
Length = 406
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A R L +N+ AF ++ +G++IGV ++I ++++ G ++ + ++ + ++
Sbjct: 7 FKIALRALNNNKLRAF------LTMLGIIIGVASVITMLAIGQGSKKSIQAQISEMGSNM 60
Query: 69 VIQQKYYPL 77
++ +
Sbjct: 61 IMIHPGADM 69
>gi|237716246|ref|ZP_04546727.1| ABC transporter [Bacteroides sp. D1]
gi|262407851|ref|ZP_06084399.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294643934|ref|ZP_06721721.1| efflux ABC transporter, permease protein [Bacteroides ovatus SD
CC 2a]
gi|294807671|ref|ZP_06766464.1| efflux ABC transporter, permease protein [Bacteroides
xylanisolvens SD CC 1b]
gi|298480992|ref|ZP_06999187.1| macrolide export ATP-binding/permease protein MacB [Bacteroides
sp. D22]
gi|229443893|gb|EEO49684.1| ABC transporter [Bacteroides sp. D1]
gi|262354659|gb|EEZ03751.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292640706|gb|EFF58937.1| efflux ABC transporter, permease protein [Bacteroides ovatus SD
CC 2a]
gi|294445107|gb|EFG13781.1| efflux ABC transporter, permease protein [Bacteroides
xylanisolvens SD CC 1b]
gi|298273015|gb|EFI14581.1| macrolide export ATP-binding/permease protein MacB [Bacteroides
sp. D22]
Length = 406
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A R L +N+ AF ++ +G++IGV ++I ++++ G ++ + +++ + ++
Sbjct: 7 LKIALRALANNKLRAF------LTMLGIIIGVASVITMLAIGQGSKKSIQQQISEMGSNM 60
Query: 69 VIQQKYYPL 77
++ +
Sbjct: 61 IMIHPGADM 69
>gi|237721066|ref|ZP_04551547.1| ABC transporter [Bacteroides sp. 2_2_4]
gi|229449901|gb|EEO55692.1| ABC transporter [Bacteroides sp. 2_2_4]
Length = 406
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A R L +N+ AF ++ +G++IGV ++I ++++ G ++ + +++ + ++
Sbjct: 7 LKIALRALANNKLRAF------LTMLGIIIGVASVITMLAIGQGSKKSIQQQISEMGSNM 60
Query: 69 VIQQKYYPL 77
++ +
Sbjct: 61 IMIHPGADM 69
>gi|119720308|ref|YP_920803.1| hypothetical protein Tpen_1403 [Thermofilum pendens Hrk 5]
gi|119525428|gb|ABL78800.1| protein of unknown function DUF214 [Thermofilum pendens Hrk 5]
Length = 393
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 40/249 (16%), Positives = 73/249 (29%), Gaps = 7/249 (2%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A+ L + + + +GVMI V+AL + + V F++ ++++
Sbjct: 7 LYLAFTSLKEKKGR------AAGAALGVMIAVLALSLALGVGESFQKAFVEQLQSTIAAD 60
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ IP V + V S +V + Y
Sbjct: 61 SVFVIGGYAGLTDADIAYFKSIPGVKDAQGVLMASGVVYTESGEKPVNIVAVDPSFLPRY 120
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIG-DKINILSPYGDVTPMGMGIRSK 187
L S R RG GV++ L R+ + +
Sbjct: 121 LGVSDMRKAVAEGETEPRGLGVLVSYSLWRDQETGRKLLDVGSVLNVRVGGRNVQVFVVG 180
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
D+ +YM Y V V++ DA++ ENI +
Sbjct: 181 LLEQTSSSMSMGHDFQVATIYMDPDAFFTYLGRTRNYPVAIVLVENLDALDSITENIRAL 240
Query: 248 LGNGVVVID 256
G +I
Sbjct: 241 APPGSRIIS 249
>gi|206901069|ref|YP_002250554.1| ABC transporter, permease protein [Dictyoglomus thermophilum
H-6-12]
gi|206740172|gb|ACI19230.1| ABC transporter, permease protein [Dictyoglomus thermophilum
H-6-12]
Length = 405
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 38/261 (14%), Positives = 85/261 (32%), Gaps = 14/261 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV- 61
+ + +A +N+ F ++ +G++IGV A++ +MS+ G + + ++
Sbjct: 1 MILEL-IKMAINNFNTNKLRTF------LTTLGIIIGVAAVVTLMSLGEGTKVTIERQFT 53
Query: 62 -LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
LG N V + + + D +L + V+ + V V+
Sbjct: 54 SLGSNLLTVFPRFGRGVGLVRGTPRSSITNDDYEALLKELDLSKIVAIVPYTSRNVQVKY 113
Query: 121 ISNSDFSYLQNSFSRFYGNVSN-----DFDRGKGVIIGKDLARNLGISIGDKINILSPYG 175
+ + + + + + DF + K +A + P G
Sbjct: 114 KAQNTNTQVIGTSPEYLNLREIKVASGDFFSEEEYKGSKRVAVLGSSVAETLFDNEDPIG 173
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD 235
+ + ++ + M+++ L Q N ++ I V PD
Sbjct: 174 QSIKISGITFKVIGVLEPQGQLGGFANLDDMIFIPLTTFQRKIQGGNYLNSIYVSAVSPD 233
Query: 236 AIEKTHENIVRILGNGVVVID 256
+ I IL + D
Sbjct: 234 VMNDLQSKIEEILRKKHKITD 254
>gi|300779376|ref|ZP_07089234.1| ABC superfamily ATP binding cassette transporter, membrane
protein [Chryseobacterium gleum ATCC 35910]
gi|300504886|gb|EFK36026.1| ABC superfamily ATP binding cassette transporter, membrane
protein [Chryseobacterium gleum ATCC 35910]
Length = 409
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FS +AW+ L N+ AF ++ +G++IGV ++I + ++ G ++ + ++
Sbjct: 3 FSNL-FRIAWKALLRNKLRAF------LTMLGIIIGVASVIAMTAIGEGSKKSISDQLSS 55
Query: 64 INGHVV 69
+ +++
Sbjct: 56 MGSNMI 61
>gi|86144819|ref|ZP_01063151.1| hypothetical protein MED222_10418 [Vibrio sp. MED222]
gi|85837718|gb|EAQ55830.1| hypothetical protein MED222_10418 [Vibrio sp. MED222]
Length = 432
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 49/287 (17%), Positives = 81/287 (28%), Gaps = 31/287 (10%)
Query: 1 MSIFS-RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
MS F V +AW L N + S +S + + I V AL E + +
Sbjct: 8 MSTFLLPTSVRLAWLNLLRNGRR------SLLSVLIIAIAVFALTSAGGYGLYTYESLRE 61
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANR-----------LDFIPDVIKVLPFVSGQAFVSG 108
GH+ + Y D + + DV V P V VS
Sbjct: 62 STARDTGHLTLSTPGYFEQDEDMPLSNGLDNVQALTKSIIGDSDVRGVQPRVYFSGLVSN 121
Query: 109 LSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKI 168
S + R +S+ + +
Sbjct: 122 GSKSTIFMGTGVNEREFDMKGPFLDVRSGQTLSDVKSPRYDSQEPQVMLGTDLARNLKVA 181
Query: 169 NILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIE 228
T + + + V G++ P+ D +Y+ + AQ + VS +
Sbjct: 182 VGDWVTLLATTSDGALNAFDFKVQGIYSTGVPELDKRQLYVHITTAQELL-ASDKVSTLS 240
Query: 229 VFVKDPDAIEKTHENIVRIL----------GNGVVVIDWQQRYQIFF 265
VF+ + + I L G + + WQ R FF
Sbjct: 241 VFLFETSKTSTVQQRIQATLDRNSASQNDQGTEIEITPWQDR--AFF 285
>gi|309791260|ref|ZP_07685791.1| hypothetical protein OSCT_1742 [Oscillochloris trichoides DG6]
gi|308226686|gb|EFO80383.1| hypothetical protein OSCT_1742 [Oscillochloris trichoides DG6]
Length = 747
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 29/249 (11%), Positives = 71/249 (28%), Gaps = 26/249 (10%)
Query: 2 SIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+ +R I A R L + +S +G+ +GV +I + ++ G + + +
Sbjct: 376 RLINRVVRINAVRNLLRRPAR------TLMSVLGLGLGVGFVIALSGIVEGSKALITNLL 429
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ + +V + VS L + + +
Sbjct: 430 SAGQADI------------------IVEQANVSDAAFSSIDERTVSQLRLDPAVKSLSSL 471
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ F YG + + + G I ++ S +
Sbjct: 472 VFGTTTVPGLPFFIVYGLDPREEYAKHYAVQEGRPLQRPGEMILGRMAANSLDKGIGDDL 531
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ + +++ + L+EAQ F + VS + + + D +
Sbjct: 532 RLSG--TSFEIVGIYETGAAFEDAGAVIPLREAQRIFGKQRQVSFVGIVLHDSSQADVVA 589
Query: 242 ENIVRILGN 250
+ +
Sbjct: 590 RRLEARYPD 598
Score = 36.7 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 32/236 (13%), Positives = 76/236 (32%), Gaps = 26/236 (11%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+++ + L+ + + ++ +G+ +GV A++V+ + NG E + ++
Sbjct: 1 MLSLKNLWRRKLR------TILTTLGIAVGVAAVVVLSAFGNGMAEGFGTNSASSDADLL 54
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ QK ++ + + V + + +G V + +D Y
Sbjct: 55 VSQKDAIMI-------------MIGTIDEQVGIEIRQMRGVAEVAGTAVGMVQVADSPYF 101
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
+ G + G I LG + + T +
Sbjct: 102 LVAGEEPRGFAIKRYKIIAGRQILNKREVMLGRQSAENMK-------KTLGDKFRINDMS 154
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ ++ + L++AQ F+ VS ++ + P E E I
Sbjct: 155 YRVVGIYETGQSIEDNGAVIHLEDAQRTFDKRRQVSYFKLKLDSPAMREPVREAIQ 210
>gi|302392662|ref|YP_003828482.1| hypothetical protein Acear_1916 [Acetohalobium arabaticum DSM 5501]
gi|302204739|gb|ADL13417.1| protein of unknown function DUF214 [Acetohalobium arabaticum DSM
5501]
Length = 404
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 30/250 (12%), Positives = 80/250 (32%), Gaps = 16/250 (6%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A + L +N+ F +S +G++IGV A+I ++S+ G ++ + + + ++
Sbjct: 6 FTIALKSLQANKLRTF------LSMLGIIIGVGAVIAIVSIGTGAQKQVTSNISSLGSNL 59
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + + ++++ + + + V + + ++
Sbjct: 60 IEISQGFSRGRGGSVSSQSTDVFTLEMADAIEASCPDVKQVIPSAQSQGLLIKGENNLQA 119
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
Y +++ + + I D+ I I + + P+G +
Sbjct: 120 SLIGTEAAYQEINDYYPKQGKFIDQVDIETAGNIIILGSELVEELFPAANPLGERVNFNY 179
Query: 189 YTVLGMFRMRFPDYDNG----------MVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+F + + Y+ + N VSG + +
Sbjct: 180 QNHTFLFTVVGVMEEKSTGGPLGDLNDQAYIPITTYLNKLANTNYVSGFKAQAESSQVAS 239
Query: 239 KTHENIVRIL 248
K I L
Sbjct: 240 KAVSQIEYFL 249
>gi|329964402|ref|ZP_08301483.1| efflux ABC transporter, permease protein [Bacteroides fluxus YIT
12057]
gi|328525451|gb|EGF52499.1| efflux ABC transporter, permease protein [Bacteroides fluxus YIT
12057]
Length = 406
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A R L +N+ AF ++ +G++IGV ++I ++++ G ++ + ++ + ++
Sbjct: 7 FKIALRALSNNKLRAF------LTMLGIIIGVASVITMLAIGQGSKKSIQAQISEMGSNM 60
Query: 69 VIQQKYYPL 77
++ +
Sbjct: 61 IMIHPGADM 69
>gi|226948489|ref|YP_002803580.1| putative ABC transporter, permease protein [Clostridium botulinum
A2 str. Kyoto]
gi|226841250|gb|ACO83916.1| putative ABC transporter, permease protein [Clostridium botulinum
A2 str. Kyoto]
Length = 427
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 31/284 (10%), Positives = 77/284 (27%), Gaps = 39/284 (13%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL-------- 62
+ WR L + F ++ +GV+IG +A+ V++S+ NGF + M ++
Sbjct: 9 IIWRNLLKRKGRTF------LTMLGVIIGSIAIYVIISLGNGFEKYMSSQLNSFGDVNII 62
Query: 63 ----GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
+ Q L + + V + + ++ S +
Sbjct: 63 NIFPYSDSTTTYQGGNIKNRKKILNDKTLKELNKLEFVKYSIPKLNTNADIAYKKSEMKS 122
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRG--KGVIIGKDLARNLGISIGDKINILSPYGD 176
++ F +G ND G + L + + I
Sbjct: 123 SNLTGMSFKNYSKDHELLFGKYPNDSKNEVVIGYKLAAYLINKKDVDNVKEEEIKKILRK 182
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY----------------MSLQEAQLYFNL 220
+ + ++ + ++ + F
Sbjct: 183 KLKVKVSRPNEKGEEEWTTYTVKVSGICKENFSDDYQIKAPLSFTKDILTYKNNDENFLK 242
Query: 221 ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIF 264
I++ +K + + + + NG + ++
Sbjct: 243 NKGYESIDLVLKSQEKSSQAEKYLKD---NGYLYQSLKEMQNSI 283
>gi|310818360|ref|YP_003950718.1| ABC transporter-like permease [Stigmatella aurantiaca DW4/3-1]
gi|309391432|gb|ADO68891.1| ABC transporter-like permease [Stigmatella aurantiaca DW4/3-1]
Length = 408
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 31/244 (12%), Positives = 81/244 (33%), Gaps = 13/244 (5%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A R L SNR + ++ +G+ +GV L+ ++ ++ G + ++ I + +
Sbjct: 13 IALRSLKSNRLR------TVLTTVGIGVGVCTLLAIVGIIQGINQSFEDQLSHIGANTLQ 66
Query: 71 QQKYYPLVDYQFIANRLD-FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
K+ + + R + + + ++ R + +
Sbjct: 67 VSKFPWTMQGDWWEYRNRKDLSADLVEAVRHGSEHVLAAAPLYFQHGEGRFLERKIGAVT 126
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG-----MGI 184
+ Y VS+ DL +++ + + + + P+G G
Sbjct: 127 LVGTTPDYATVSSLVVDRGRFFTETDLNERAAVAVIGAELVRTLFTGIDPLGHRLLLEGK 186
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ L + + + + + +F + + I V V PD + + +
Sbjct: 187 PYRVVGTLEPKGTILGENQDLVALVPSRTFLAHFGKKRSP-NIAVAVDSPDHVLTVQDQL 245
Query: 245 VRIL 248
+L
Sbjct: 246 TAVL 249
>gi|289192836|ref|YP_003458777.1| protein of unknown function DUF214 [Methanocaldococcus sp.
FS406-22]
gi|288939286|gb|ADC70041.1| protein of unknown function DUF214 [Methanocaldococcus sp.
FS406-22]
Length = 367
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 32/242 (13%), Positives = 70/242 (28%), Gaps = 31/242 (12%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A R L N S ++ +G++IGV A I + ++ G + I LG +
Sbjct: 3 FELAKRNLRRNLLR------SILALMGIIIGVAA-ISSLGILGGGLKQGIMENLGSISNY 55
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+I Y F +D + + + + + +
Sbjct: 56 IIVFPNYQNGYTSFDKKDVDKLRVLNCKVIPIYATSDFVYIKGKNRRAYTNIFGIDKNDI 115
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+L + + S DV
Sbjct: 116 N-----------------------YLNLKVKVSDTSAAVDTFFSSANDVDIGDQLEIKNI 152
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN-AVSGIEVFVKDPDAIEKTHENIVRI 247
+ + + + ++ + + ++ N S I ++VK+ + I+K +I
Sbjct: 153 SLRICGIYNSTFLFPDNSIILTAKTYRRFYGENNYNYSRIILYVKNINDIDKIKNETDKI 212
Query: 248 LG 249
L
Sbjct: 213 LN 214
>gi|297531094|ref|YP_003672369.1| hypothetical protein GC56T3_2850 [Geobacillus sp. C56-T3]
gi|297254346|gb|ADI27792.1| protein of unknown function DUF214 [Geobacillus sp. C56-T3]
Length = 389
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR + N+ +F ++ +G++IGV ++IV++S+ G E + ++ + +
Sbjct: 6 SIKMAWRSIRGNKLRSF------LTMLGMIIGVSSVIVLVSIGRGSSEQVTSQINQLGTN 59
>gi|194335885|ref|YP_002017679.1| ABC transporter related [Pelodictyon phaeoclathratiforme BU-1]
gi|194308362|gb|ACF43062.1| ABC transporter related [Pelodictyon phaeoclathratiforme BU-1]
Length = 656
Score = 48.2 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 39/281 (13%), Positives = 101/281 (35%), Gaps = 22/281 (7%)
Query: 6 RFEVIVA--WRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
RF +A ++ + +N+ +F +S +G+++GV ++I +M++ G + M +++
Sbjct: 255 RFSGFMAQAFQSILANKMRSF------LSVLGILVGVASVIAMMALGEGAKAAMQEQLKS 308
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ +++ + + + V S V + +G N
Sbjct: 309 MGSNMLSIRGGSAKIRGAAQGAGAVARFTAVDVTDISSLHTLVKNAAGVVNGSARIVYGN 368
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
++S YG + +++ + +I + +G+ P+G
Sbjct: 369 KNWSSTLTGVGFDYGTMRAAIPVLGRWFTPEEMQKREKSAIIGVTVVKELFGNSNPLGKT 428
Query: 184 IRSKSYTVLGMFRMRF-----PDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
I+ + P ++ +V + + A ++ SGI V V P IE
Sbjct: 429 IKINRINFKVIGIAPPKGFSGPQDEDDVVIIPVTTAMYRVLGKDYFSGIFVEVASPTLIE 488
Query: 239 KTHENIVRIL---------GNGVVVIDWQQRYQIFFSCYES 270
+ + + + + + D + ++ S ++
Sbjct: 489 QAKTAVSQQIRKRHRLKADDDSFNIRDMTEIQKMLTSTTQT 529
>gi|238897761|ref|YP_002923440.1| ABC-type antimicrobial peptide transport system, permease
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
gi|229465518|gb|ACQ67292.1| ABC-type antimicrobial peptide transport system, permease
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
Length = 667
Score = 47.8 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 26/243 (10%), Positives = 78/243 (32%), Gaps = 8/243 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+++AWR + SN+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 276 ALLMAWRAMLSNKMR------TALTMLGIIIGIASVVSILVVGDAAQQKVLANIRAIGTN 329
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+ + A +S S
Sbjct: 330 TISIYPGRDYGDDDPSNRQALIYEDIAALQAQSYISAISPIISGNIRLRSGNIDVASTIL 389
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ + + YG + +R + + + + +
Sbjct: 390 GVGGQYFKAYGIKIQNGERILERQVRDQSQVVVIDKNTQRRLFPRTKDVIGKEILVGNIP 449
Query: 188 SYTVLGMFRMRFPDYDNG--MVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
V + +N +++ F + I V +K+ + + ++
Sbjct: 450 MTVVGIAKEKQSMYGNNNALRIWIPYSTMTNLFTGRSYFDAITVRIKEGYNNNEAEQQLI 509
Query: 246 RIL 248
R+L
Sbjct: 510 RLL 512
>gi|190573532|ref|YP_001971377.1| putative macrolide-specific ABC-type efflux carrier
[Stenotrophomonas maltophilia K279a]
gi|190011454|emb|CAQ45072.1| putative macrolide-specific ABC-type efflux carrier
[Stenotrophomonas maltophilia K279a]
Length = 652
Score = 47.8 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 38/243 (15%), Positives = 85/243 (34%), Gaps = 9/243 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + ++R F ++ +G++IG+ +++ V+++ NG ++ +++ + + +
Sbjct: 262 AFRMALLAMNAHRLRTF------LTMLGIIIGIASVVSVVALGNGSQQQILQNISALGTN 315
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + + D + + +S+ + S + S
Sbjct: 316 TIDVYPGRGFGDMRSARVQTLKASDADALAKQSYVDSATPSVSTSVTARYRNQSSTAQVS 375
Query: 128 YLQNSFSRFYGNV--SNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ F R G S F V +A + + P G V +G
Sbjct: 376 GVGEQFFRVKGVTLLSGSFFDTDAVKGLGQVAVIDENTQTQFFPDVDPVGQVILLGNVPA 435
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ V F + V++ ++ VS I V V D ++ E I
Sbjct: 436 -RVVGVAKRQSFGFGGSTSLSVWVPYTTVMSRMLGQSHVSSITVRVDDDTPMDAAQEAIT 494
Query: 246 RIL 248
R+L
Sbjct: 495 RLL 497
>gi|124485020|ref|YP_001029636.1| hypothetical protein Mlab_0193 [Methanocorpusculum labreanum Z]
gi|124362561|gb|ABN06369.1| protein of unknown function DUF214 [Methanocorpusculum labreanum Z]
Length = 413
Score = 47.8 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 32/248 (12%), Positives = 67/248 (27%), Gaps = 6/248 (2%)
Query: 2 SIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
I+S + +A R L N+ + +S IG++IGV A+ + + GF E+M +
Sbjct: 11 KIYSPMILSLAVRNLKLNK------FRTILSMIGIVIGVFAICGMGMISAGFTEEMNSMI 64
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ I ++D I+ + + S + G
Sbjct: 65 SDTADTLTITPIGEKVIDGTTTTGFSTKDLRDIESAVKSVTKEYEFIPMYSSSKYIYIGK 124
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ + S + + ++ D +
Sbjct: 125 ETTMATISGMDSSDITKLATLIQGTLPRGATNVIVGETFAEDNNLRLGSRMIMLDSSGQE 184
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ R +N +V L + + V DP +
Sbjct: 185 VTCRVVGIMEDTGQLTFGFSTNNAVVGSIEWYTSLVGDNHGLYDKVIVKAYDPTELNAID 244
Query: 242 ENIVRILG 249
I + +
Sbjct: 245 AAIEKKMN 252
>gi|695784|emb|CAA58843.1| orf3 [Zymomonas mobilis]
Length = 209
Score = 47.8 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 25/60 (41%)
Query: 209 MSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
M L +AQ + + V IE+ + D + + + + + N V+ DW+ F
Sbjct: 1 MPLSDAQTLLMMNDTVGIIEIKTNNADRVGQILDPLKDRVANVGVLQDWRTMNASLFQAL 60
>gi|159906165|ref|YP_001549827.1| hypothetical protein MmarC6_1784 [Methanococcus maripaludis C6]
gi|159887658|gb|ABX02595.1| protein of unknown function DUF214 [Methanococcus maripaludis C6]
Length = 397
Score = 47.8 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 33/259 (12%), Positives = 77/259 (29%), Gaps = 27/259 (10%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + A + + + +F++I GV+IG++A++ ++S+ G + +
Sbjct: 1 MKLTDVVSF--AGQNITQKKTQSFLTII------GVVIGILAIVSLISLGYGVQNYITGE 52
Query: 61 VLGINGHVVIQQKYYP--------LVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSG 112
+ I +++ + + V ++
Sbjct: 53 ITTIGANIISVIPSQNFGGPVVSKYFKDKDVNAVKSVRGVDEVVAVWIGSYELEYRDQPI 112
Query: 113 GSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILS 172
+LV S Y Y + +IG L
Sbjct: 113 YGTILVVEPSKFSKVYSTTWGYEPYKGRWIEDSDKYSCMIGYSL-----------ATNSF 161
Query: 173 PYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK 232
+ I Y V+G+ +S Q F +++ + + V VK
Sbjct: 162 ENEIDIGDKITINGTKYKVIGILEETGNPATENSAIISKDVGQALFEIDDEYNRMIVSVK 221
Query: 233 DPDAIEKTHENIVRILGNG 251
+ + + E+I + + +
Sbjct: 222 SGEDVLRVSEDIQKEVEDS 240
>gi|313634876|gb|EFS01285.1| macrolide export ATP-binding/permease protein MacB [Listeria
seeligeri FSL N1-067]
gi|313639508|gb|EFS04346.1| macrolide export ATP-binding/permease protein MacB [Listeria
seeligeri FSL S4-171]
Length = 388
Score = 47.8 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 31/268 (11%), Positives = 90/268 (33%), Gaps = 20/268 (7%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M I+ +A + L S + F ++ +G++IGV ++I+++S+ +++ +
Sbjct: 1 MKIYQNV--KLALKQLLSTKFRTF------LTMLGIIIGVFSVILLISIGTAISKNVSTQ 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + ++V Y +F + + ++ Q + + V G
Sbjct: 53 LGDMGSNLVSVSFYPNNPTEKFTYKEATNLLEDGEIGSPEVMQTKAVRTNEHTDDMQVTG 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
I+++ + +R G ++ D + A ++ +
Sbjct: 113 INDAYANIKNLELAR--GRFCSEVDVRYAQKVTVIGADVAKSYFKEQNPVGKYMRISGAR 170
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ I +F +++ + A+ F +++ + K P+ +
Sbjct: 171 YLVIGVLKEKGESLFGSADKK-----LFIPITSAERLF-KTDSIDLYYIQAKSPNQVPSV 224
Query: 241 HENI----VRILGNGVVVIDWQQRYQIF 264
+ + R+ N + +
Sbjct: 225 VKQVDHKMSRLFPNDKDAYSVVNQQEAL 252
>gi|229541698|ref|ZP_04430758.1| macrolide ABC efllux protein [Bacillus coagulans 36D1]
gi|229326118|gb|EEN91793.1| macrolide ABC efllux protein [Bacillus coagulans 36D1]
Length = 338
Score = 47.8 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 28/51 (54%), Gaps = 8/51 (15%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMN 51
M + +AWR + +++ +F ++ +G++IGV ++I ++S+
Sbjct: 1 MKLLP--SFKLAWRNIQTSKLRSF------LTMLGIIIGVASVIALVSIGQ 43
>gi|121535653|ref|ZP_01667458.1| protein of unknown function DUF214 [Thermosinus carboxydivorans
Nor1]
gi|121305757|gb|EAX46694.1| protein of unknown function DUF214 [Thermosinus carboxydivorans
Nor1]
Length = 407
Score = 47.8 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 41/261 (15%), Positives = 88/261 (33%), Gaps = 26/261 (9%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
V +A L +N+ S ++ +G++IGV A+I ++S+ G R+ + + + +
Sbjct: 8 SVKIALNALVANKLR------SVLTMLGIIIGVGAVIAMVSIGLGVRDKVQNSIASLGSN 61
Query: 68 VVIQQK-------------YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
++I + + +P V V P V Q V + +
Sbjct: 62 LIIVTPGAASSSGVRQAAGTNTTLTLKDAQAIAREVPGVSAVAPSVGRQYQVVAGNQNWT 121
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ + S + + R + +IG +A NL + +P
Sbjct: 122 TNVQGTTPEYMDVRNLSVQSGSFITPEDVAARNRVAVIGSTVAGNLFGN-------GNPV 174
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G + + + + +V + L AQ + I V
Sbjct: 175 GQNIRINNAPFKVIGVLESKGQSAGGQDQDDIVIIPLTTAQERLMGITYIQTISVQAASA 234
Query: 235 DAIEKTHENIVRILGNGVVVI 255
D I++ ++I +L + +
Sbjct: 235 DVIDQVQDSITGLLRSRHRIT 255
>gi|268590205|ref|ZP_06124426.1| macrolide efflux ABC transporter, permease/ATP-binding protein
[Providencia rettgeri DSM 1131]
gi|291314486|gb|EFE54939.1| macrolide efflux ABC transporter, permease/ATP-binding protein
[Providencia rettgeri DSM 1131]
Length = 647
Score = 47.8 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 25/250 (10%), Positives = 82/250 (32%), Gaps = 12/250 (4%)
Query: 4 FSRFE--VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+ RF +++AWR + N+ + ++ +G++IG+ +++ +M + + + ++ +
Sbjct: 250 YGRFSEALLMAWRAMVVNKMR------TLLTMLGIIIGIASVVSIMVIGDAAQGMVLNDI 303
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
I + + + D+ + A L+
Sbjct: 304 KSIGTNTISIYPGEDFGYDDAKNRQSLRASDIDALAKQPYVYAISGELNHSTRLRKGNVD 363
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+++ + + + Y + ++ ++ K + + + +
Sbjct: 364 ASAQLTGVGRDYFNVYASKFSEGMSFTQDMVDKRAQVVVIDANTKRRFFPKQEHVIGETL 423
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQE---AQLYFNLENAVSGIEVFVKDPDAIE 238
+ + + + + + + L + N S + V VKD +
Sbjct: 424 LIGNMPVTIIGVLEEKKSTFGSSKSLSVWLPDTTVNSKILNRPYYESFV-VRVKDGYDAK 482
Query: 239 KTHENIVRIL 248
+ + R+L
Sbjct: 483 TVEQQLTRLL 492
>gi|332181726|gb|AEE17414.1| protein of unknown function DUF214 [Treponema brennaborense DSM
12168]
Length = 394
Score = 47.8 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 38/255 (14%), Positives = 84/255 (32%), Gaps = 11/255 (4%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+AW L++N K + + +M+ V +LI+ ++ M + G++
Sbjct: 5 KLAWTNLWANWKRTLLQLVL------IMVTVSSLILYRGYTEYSKQGMALSFIEKTGNLQ 58
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
I +K + N + ++ V SG+ + +
Sbjct: 59 ISKKNNSEYLTEAEMNMIFSELKNSSIIKNVEPVLDFSGIIGTD-----KTSTIFWGEAY 113
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
N ++ + I+ L D + GI S+
Sbjct: 114 DNPEKKYGVLYGKPVFKNSDSIVIGTLLAEKLGINFDSLENSYGNVLSNTNDSGISLASF 173
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
+ G+ P D G++ S + L+N S ++V+ ++ ++ EN+ + L
Sbjct: 174 NIAGITSTGIPQNDEGLLIASRASILEFLGLDNIASYLQVYTRNDSYTKEMQENLQKKLS 233
Query: 250 NGVVVIDWQQRYQIF 264
V +W + +
Sbjct: 234 ASFEVKNWIEMNPSY 248
>gi|299141589|ref|ZP_07034725.1| macrolide export ATP-binding/permease protein MacB [Prevotella oris
C735]
gi|298576925|gb|EFI48795.1| macrolide export ATP-binding/permease protein MacB [Prevotella oris
C735]
Length = 412
Score = 47.8 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 34/259 (13%), Positives = 78/259 (30%), Gaps = 13/259 (5%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A R + +N+ +F ++ +G++IGV ++I ++++ G ++ + + V + ++
Sbjct: 7 IKIAVRAILANKMRSF------LTALGIIIGVASVITMLAIGQGSKKSIQENVAQMGSNM 60
Query: 69 VIQQKYYPL----VDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
++ + L +A +SS G + + S
Sbjct: 61 IMIHPGADMRGGVRQDASSMETLKMQDYNNIKDQCDYIKAISPVVSSNGQWIYGNNNTPS 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVII---GKDLARNLGISIGDKINILSPYGDVTPMG 181
+ + D + I K + N P G V G
Sbjct: 121 SIYGVNQDYLEIRQLSVEDGEMFTENDIKGAAKVCVVGQTVVDNLFSNGADPVGKVVRFG 180
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ + +V + +S I+ + EK
Sbjct: 181 SIPFRIVGVLKKKGYNSMGMDQDDLVLAPYTTVMKRILAQTYLSEIQCSAITENLTEKAI 240
Query: 242 ENIVRILGNGVVVIDWQQR 260
E + IL + D
Sbjct: 241 EQLTEILRRDHKLKDATDT 259
>gi|218130791|ref|ZP_03459595.1| hypothetical protein BACEGG_02385 [Bacteroides eggerthii DSM
20697]
gi|317474312|ref|ZP_07933588.1| hypothetical protein HMPREF1016_00567 [Bacteroides eggerthii
1_2_48FAA]
gi|217987135|gb|EEC53466.1| hypothetical protein BACEGG_02385 [Bacteroides eggerthii DSM
20697]
gi|316909622|gb|EFV31300.1| hypothetical protein HMPREF1016_00567 [Bacteroides eggerthii
1_2_48FAA]
Length = 406
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A R L +N+ AF ++ +G++IGV ++I ++++ G ++ + ++ + ++
Sbjct: 7 FKIALRALANNKLRAF------LTMLGIIIGVASVITMLAIGQGSKKSIQAQISEMGSNM 60
Query: 69 VIQQKYYPL 77
++ +
Sbjct: 61 IMIHPGADM 69
>gi|325067865|ref|ZP_08126538.1| hypothetical protein AoriK_08593 [Actinomyces oris K20]
Length = 344
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 41/259 (15%), Positives = 79/259 (30%), Gaps = 11/259 (4%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
VAWR + ++ K F ++ VM+GV L +++ E K V +
Sbjct: 4 VAWRSVRAHAKQFF------LTTFAVMLGVAFLSGTLALRASLSETFSKLVSSTATSDLY 57
Query: 71 QQKYYP-LVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
Q + + P + + V + G + V +N
Sbjct: 58 VQGPKIATDGDDSSSKSVPTQPIDSSLTEQIKQIDGVEAANPGVQMLGVLVGANDAPVTT 117
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
+ + F N+ A + + G N GD T + +
Sbjct: 118 TGAPTLFIPLYDNEKGLTWVQGHKPQGAGEITLESGALKNSGLKVGDKTHIVVQGSPTEV 177
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
TV+G F +V + + V+ I V V ++ I +++
Sbjct: 178 TVVGEFHYESSMASATVVGVDPNWLMPIAAPDGKVTTIAVDVAQGSSVNTVKSEITKVIP 237
Query: 250 NGVVVID----WQQRYQIF 264
+G V +++ Q
Sbjct: 238 DGARVQPRAEVIKEQNQTI 256
>gi|220933158|ref|YP_002510066.1| ABC-type transport system, involved in lipoprotein release,
permease component [Halothermothrix orenii H 168]
gi|219994468|gb|ACL71071.1| ABC-type transport system, involved in lipoprotein release,
permease component [Halothermothrix orenii H 168]
Length = 419
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 36/261 (13%), Positives = 85/261 (32%), Gaps = 30/261 (11%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ +A++ LF +R +SI + + VM ++ + G + + +
Sbjct: 1 MSYLFKIAFKNLFRHRLRTLVSIVA------IAFSVMIVVFARGYIVGLIDSISADHIQY 54
Query: 65 NGHVVIQQKYYPLVDY-----------------QFIANRLDFIPDVIKVLPFVSGQAFVS 107
N + L + +A+ L I V V+P + A VS
Sbjct: 55 NSGHIKIVNRDYLQQERLLPLNYPVDGFKGQGVEEMASDLKNIDRVEMVIPRLKFGAMVS 114
Query: 108 GLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK 167
+ + ++ G V++G L + +GDK
Sbjct: 115 TDKELITMNGWGVNPEQEIAFTSIEDYLVEG--RMIKPGRLEVVMGSGLLNKINRQVGDK 172
Query: 168 INILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGI 227
+ I+ + G+ + ++G + ++ L +AQ +E + +
Sbjct: 173 VTIVFKTSFNSLRGVT-----FRIVGRLETGIKLLNEVAFFLPLDQAQRLLYMEGQATEL 227
Query: 228 EVFVKDPDAIEKTHENIVRIL 248
+ D +++ + ++L
Sbjct: 228 LLVSSDKKLVDQILPEVKKVL 248
>gi|332176692|gb|AEE12382.1| protein of unknown function DUF214 [Porphyromonas asaccharolytica
DSM 20707]
Length = 415
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 24/279 (8%), Positives = 84/279 (30%), Gaps = 18/279 (6%)
Query: 3 IFSRFEVIVAWR-YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+ R + +A + Y NR+++ + + + + + +++ +++M+GF+ + V
Sbjct: 1 MRLRLPIWLARQLYSRENRRHSKVYALVRFAIPAIALSLAVMLLGIAIMDGFQYSVRDTV 60
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ G V++ + +D + S + +++
Sbjct: 61 RLVTGDVILCEYGKQPIDLDNVITL-----TPQMTQRMNEMPEIASVRPVRTAVGMIKTD 115
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
S + + + + + + L+ V
Sbjct: 116 STYQGVAVTGVDDFTFLEPLCAMGDLSDSTLAEGANPIVLPKTSAQKLGLTIGDKVVLYF 175
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAI--- 237
+G + + + + + + Y++ + ++ + IE+ K+ D
Sbjct: 176 LGDKVSVRSFTLIAILELANTAQPLAYVTNDLLGRVGDWQQDQYTRIEILAKNRDRSLLD 235
Query: 238 --EKTHENIVRILGNG------VVVIDWQQRYQIFFSCY 268
+ +++ L + + Q +
Sbjct: 236 METTLSDQLIQSLSEPGVTKETLGIYTGSQINGGVYQWI 274
>gi|329954279|ref|ZP_08295373.1| efflux ABC transporter, permease protein [Bacteroides clarus YIT
12056]
gi|328527985|gb|EGF54971.1| efflux ABC transporter, permease protein [Bacteroides clarus YIT
12056]
Length = 406
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A R L +N+ AF ++ +G++IGV ++I ++++ G ++ + ++ + ++
Sbjct: 7 FKIALRALANNKLRAF------LTMLGIIIGVASVITMLAIGQGSKKSIQAQISEMGSNM 60
Query: 69 VIQQKYYPL 77
++ +
Sbjct: 61 IMIHPGADM 69
>gi|146329038|ref|YP_001209769.1| macrolide-specific ABC-type efflux carrier protein [Dichelobacter
nodosus VCS1703A]
gi|146232508|gb|ABQ13486.1| macrolide-specific ABC-type efflux carrier protein [Dichelobacter
nodosus VCS1703A]
Length = 644
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 33/247 (13%), Positives = 87/247 (35%), Gaps = 17/247 (6%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A R + ++ +F ++ +G++IG+ +++ ++++ G ++ ++ R+ + +
Sbjct: 255 AFSMAIRAILGHKLRSF------LTMLGIIIGIASVVSMVALGQGSQQQVLSRIQTLGSN 308
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + L ++ Q+FV + S S+ +
Sbjct: 309 TIQVFSGAFGDPNAWRVQTLSADD-----ATLLAQQSFVDSATPILSLDGAVRTSDRTLT 363
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ R Y V N + D+ ++ D+ + + P+G +
Sbjct: 364 AIVTGIGRHYFQVQNMPIIRGAALAENDIRELKAVAYIDEKSAQQLFPHSDPLGAVMVLG 423
Query: 188 SYTVLGMFRMRFPDYDNG------MVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ V + + ++ ++M + VS I V ++D
Sbjct: 424 NVAVTIIGVVDTQNHRQFRNTNAINLFMPYTSVMSRLLGSSRVSQIMVRIRDGVESTVAE 483
Query: 242 ENIVRIL 248
+ I RIL
Sbjct: 484 DAISRIL 490
>gi|84386219|ref|ZP_00989248.1| hypothetical protein V12B01_18536 [Vibrio splendidus 12B01]
gi|84378989|gb|EAP95843.1| hypothetical protein V12B01_18536 [Vibrio splendidus 12B01]
Length = 432
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 47/287 (16%), Positives = 81/287 (28%), Gaps = 31/287 (10%)
Query: 1 MSIFS-RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
MS F + +AW L N + S +S + + I V AL E + +
Sbjct: 8 MSTFLLPTSMRLAWLNLLRNGRR------SLLSVLIIAIAVFALTSAGGYGLYTYESLRE 61
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANR-----------LDFIPDVIKVLPFVSGQAFVSG 108
GH+ + Y D + + +V V P V VS
Sbjct: 62 STARDTGHLTLSTPGYFEQDEDMPLSNGLDNVQALTKSIIGDSEVRGVQPRVYFSGLVSN 121
Query: 109 LSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKI 168
S + R +S+ + +
Sbjct: 122 GSKSTIFMGTGVNEREFDMKGPFLDVRSGQTLSDVKSPRYDSQEPQVMLGTDLARNLKVA 181
Query: 169 NILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIE 228
T + + + V G++ P+ D +Y+ + AQ + VS +
Sbjct: 182 VGDWVTLLATTSDGALNAFDFQVQGIYSTGVPELDKRQLYVHITTAQELL-ASDKVSTLS 240
Query: 229 VFVKDPDAIEKTHENIVRIL----------GNGVVVIDWQQRYQIFF 265
VF+ + + I L G + + WQ R FF
Sbjct: 241 VFLFETSKTSTVQQRIQTALDRNSVSQSDQGTEIEITPWQDR--AFF 285
>gi|294496360|ref|YP_003542853.1| hypothetical protein Mmah_1713 [Methanohalophilus mahii DSM 5219]
gi|292667359|gb|ADE37208.1| protein of unknown function DUF214 [Methanohalophilus mahii DSM
5219]
Length = 404
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/228 (12%), Positives = 75/228 (32%), Gaps = 3/228 (1%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IGV A+I +S+ F + ++ + + ++ + Y + +
Sbjct: 22 STLTTLGIIIGVAAVIANVSLGASFNQFFVEELGTQGSNFIVIYSQDIDLFYDAQLDTVR 81
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
+P + + + Q S + ++G S + D
Sbjct: 82 SVPGIEGISG-IRQQVASVTYLSTVRQIDIQGCSADYEQIGNIQLAEGTFFSDKDKYVAV 140
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGM-FRMRFPDYDNGMV 207
+ IS + I+I D T + + ++ + +
Sbjct: 141 LGSDVAYEKFDRQISNHNSIDIEFVRRDGTKVSHSFKVIGIIDSPKTTFIQSGAESDVRI 200
Query: 208 YMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVI 255
++ + L + GI V + ++ + + + R L + V
Sbjct: 201 FIPIATMNEMLGLGD-YGGISATVDESRSVREVSDEVDRRLARSLGVS 247
>gi|194365075|ref|YP_002027685.1| ABC transporter-like protein [Stenotrophomonas maltophilia R551-3]
gi|194347879|gb|ACF51002.1| ABC transporter related [Stenotrophomonas maltophilia R551-3]
Length = 652
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 38/243 (15%), Positives = 84/243 (34%), Gaps = 9/243 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + ++R F ++ +G++IG+ +++ V+++ NG ++ +++ + + +
Sbjct: 262 AFRMALLAMNAHRLRTF------LTMLGIIIGIASVVSVVALGNGSQQQILQNISALGTN 315
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + + D + + +S+ + S + S
Sbjct: 316 TIDVYPGRGFGDMRSARVQTLKASDADALARQSYVDSSTPSVSTSVTARYRNQSSTAQVS 375
Query: 128 YLQNSFSRFYGNV--SNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ F R G S F V +A + P G V +G
Sbjct: 376 GVGEQFFRVKGVTLLSGSFFDSDAVKGLGQVAVIDENTQAQFFPDTDPIGQVILLGNVPA 435
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ V F + V++ ++ VS I V V D ++ E I
Sbjct: 436 -RVVGVAKRQSFGFGGSTSLSVWLPYTTVMSRMLGQSHVSSITVRVDDATPMDAAQEAIT 494
Query: 246 RIL 248
R+L
Sbjct: 495 RLL 497
>gi|254446270|ref|ZP_05059746.1| efflux ABC transporter, permease protein [Verrucomicrobiae
bacterium DG1235]
gi|198260578|gb|EDY84886.1| efflux ABC transporter, permease protein [Verrucomicrobiae
bacterium DG1235]
Length = 399
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 43/263 (16%), Positives = 82/263 (31%), Gaps = 25/263 (9%)
Query: 30 FISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDF 89
+S G+ GV IV + + GF E I +LG +G + I+ K+ + A+
Sbjct: 2 LMSLCGIGFGVGFFIVTQAQLTGFEEFFIDTILGTDGAIRIEDKFQSTLAQVEAASSSTG 61
Query: 90 IPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKG 149
L + + S + + + + G
Sbjct: 62 NTSFFVADRGNRRYVEGVEYPDQIIEALRILPNVASTSSVLKGRISVQSPLREESAQVFG 121
Query: 150 VIIGKDLARNLGISIGDK--------------------INILSPYGDVTPMGMGIRSKSY 189
+++ L+ + + + GD + Y
Sbjct: 122 IVLNDHLSVSDLEDQLVFGSLEEFRATPSGILVGRKLADRLQARVGDSIMIESKGTQNRY 181
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
V G++ D D ++M L +A+ + VS I+V V D D E I ++
Sbjct: 182 RVSGVYETGVSDIDRVRIFMHLDQARSLLQRPHGVSFIQVSVFDRDRAEYDALVIENMV- 240
Query: 250 NGVVVIDWQQRYQIF---FSCYE 269
WQ R +++ F +
Sbjct: 241 -QHSAAPWQDREKVWLDVFKALQ 262
>gi|313887455|ref|ZP_07821144.1| efflux ABC transporter, permease protein [Porphyromonas
asaccharolytica PR426713P-I]
gi|312923097|gb|EFR33917.1| efflux ABC transporter, permease protein [Porphyromonas
asaccharolytica PR426713P-I]
Length = 415
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 24/279 (8%), Positives = 84/279 (30%), Gaps = 18/279 (6%)
Query: 3 IFSRFEVIVAWR-YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+ R + +A + Y NR+++ + + + + + +++ +++M+GF+ + V
Sbjct: 1 MRLRLPIWLARQLYSRENRRHSKVYALVRFAIPAIALSLAVMLLGIAIMDGFQYSVRDTV 60
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ G V++ + +D + S + +++
Sbjct: 61 RLVTGDVILCEYGKQPIDLDNVITL-----TPQMTQRMSEMPEIASVRPVRTAVGMIKTD 115
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
S + + + + + + L+ V
Sbjct: 116 STYQGVAVTGVDDFTFLEPLCAMGDLSDSTLAEGANPIVLPKTSAQKLGLTIGDKVVLYF 175
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAI--- 237
+G + + + + + + Y++ + ++ + IE+ K+ D
Sbjct: 176 LGDKVSVRSFTLIAILELANTAQPLAYVTNDLLGRVGDWQQDQYTRIEILAKNRDRSLLD 235
Query: 238 --EKTHENIVRILGNG------VVVIDWQQRYQIFFSCY 268
+ +++ L + + Q +
Sbjct: 236 METTLSDQLIQSLSEPGVTKETLGIYTGSQINGGVYQWI 274
>gi|167762482|ref|ZP_02434609.1| hypothetical protein BACSTE_00837 [Bacteroides stercoris ATCC
43183]
gi|167699588|gb|EDS16167.1| hypothetical protein BACSTE_00837 [Bacteroides stercoris ATCC
43183]
Length = 406
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A+R L +N+ AF ++ +G++IGV ++I ++++ G ++ + ++ + ++
Sbjct: 7 FKIAFRALANNKLRAF------LTMLGIIIGVASVITMLAIGQGSKKSIQAQISEMGSNM 60
Query: 69 VIQQKYYPL 77
++ +
Sbjct: 61 IMIHPGADM 69
>gi|325279067|ref|YP_004251609.1| hypothetical protein Odosp_0330 [Odoribacter splanchnicus DSM
20712]
gi|324310876|gb|ADY31429.1| protein of unknown function DUF214 [Odoribacter splanchnicus DSM
20712]
Length = 406
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 32/254 (12%), Positives = 70/254 (27%), Gaps = 13/254 (5%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A R L +N+ F ++ +G++IGV ++I ++++ G + + ++ + ++
Sbjct: 7 FRIALRALGNNKMRGF------LTMLGIIIGVASVITMLAIGQGSKRSIRAQIAEMGSNM 60
Query: 69 VIQQKYYPL----VDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
++ + L V A +SS G + +
Sbjct: 61 IMIHPGADMRGGVRQDPAAMQSLKLDDYQAIVDETRYVSACSPSVSSSGQAIYGSNNYPT 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARN---LGISIGDKINILSPYGDVTPMG 181
+ + + D I I N +P G + G
Sbjct: 121 SIYGINPDYLEIRKYTLAEGDMFTEEDILGSAKVCVVGKTIVDNLFTNGENPVGQIIRFG 180
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ + ++ Q + I D E
Sbjct: 181 KIPFRIIGVLTSKGYNTMGMDQDDLILAPYTTVQKRILAITHLQSIFCSALSEDQTELAE 240
Query: 242 ENIVRILGNGVVVI 255
E I IL +
Sbjct: 241 EEIASILRRNHRLK 254
>gi|221065516|ref|ZP_03541621.1| ABC transporter related [Comamonas testosteroni KF-1]
gi|220710539|gb|EED65907.1| ABC transporter related [Comamonas testosteroni KF-1]
Length = 656
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 27/238 (11%), Positives = 77/238 (32%), Gaps = 7/238 (2%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AWR + NR + ++ +G++IGV ++IV++++ G R +++++ + ++
Sbjct: 271 AWRGMRMNRVR------TSLTLLGIVIGVASVIVMLAIGEGARRKVVEQMGTMGTAILYM 324
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
P D + + ++ + + G + + S
Sbjct: 325 GSKPPASGGPAGQITEDDLAAMRELSSVRRVMPVIGDPVTVRYGKADKQVYVFAASQEMP 384
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTV 191
+ F + + + + +P G +G +
Sbjct: 385 LVHHWRVAQGRYFTDVEDRDLAPLVVIGHKAHRHFFPEVANPLGLQLIIGNSAFEVIGVM 444
Query: 192 LGMFRMRFPDYDNGMVYMSLQEAQ-LYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ MV++ Q + + + + V + + + ++I +L
Sbjct: 445 SERGADSGAQDYDDMVFIPYQSGRARVYQAQTQPDYVVVEASSSEQVHEAEQSIRSLL 502
>gi|270294024|ref|ZP_06200226.1| ABC transporter permease [Bacteroides sp. D20]
gi|270275491|gb|EFA21351.1| ABC transporter permease [Bacteroides sp. D20]
Length = 406
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A R L +N+ AF ++ +G++IGV ++I ++++ G ++ + ++ + ++
Sbjct: 7 FKIALRALNNNKLRAF------LTMLGIIIGVASVITMLAIGQGSKKSIQAQISEMGSNM 60
Query: 69 VIQQKYYPL 77
++ +
Sbjct: 61 IMIHPGADM 69
>gi|238753479|ref|ZP_04614842.1| Macrolide export ATP-binding/permease protein macB 2 [Yersinia
ruckeri ATCC 29473]
gi|238708432|gb|EEQ00787.1| Macrolide export ATP-binding/permease protein macB 2 [Yersinia
ruckeri ATCC 29473]
Length = 649
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 27/243 (11%), Positives = 82/243 (33%), Gaps = 8/243 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+++AWR + SN+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 258 ALLMAWRAMASNKMR------TALTMLGIIIGIASVVSILVVGDAAKQMVLADIRAIGTN 311
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+ + A +S S
Sbjct: 312 TIDIYPGKDFGDDDPSNRQALVYGDMAALKAQSYVNAVSPVISGSMRLRFGNTDVAGSVS 371
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK--INILSPYGDVTPMGMGIR 185
+ + + R YG + + + + + + ++ + +
Sbjct: 372 GVSSQYFRVYGIKIDQGTAITPDQVERQVQVVVIDRNTQRRLFPHMNDVIGQVMLIGNMP 431
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ V+ + F V++ ++ I V + D ++ + +V
Sbjct: 432 ATIIGVVEEKQSMFGSSKALRVWIPYTTMANRLMGKSYFDSITVRINDGYNSKEAEQQLV 491
Query: 246 RIL 248
R+L
Sbjct: 492 RLL 494
>gi|224369121|ref|YP_002603285.1| LolE [Desulfobacterium autotrophicum HRM2]
gi|223691838|gb|ACN15121.1| LolE [Desulfobacterium autotrophicum HRM2]
Length = 418
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 37/275 (13%), Positives = 86/275 (31%), Gaps = 24/275 (8%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +A R +F NR + I+ + G +++I+ M + +
Sbjct: 1 MKLPISIKLAIRNVFRNRIR------TIITLAAIAFGSVSIIIAGGFFEDTFMLMREAAI 54
Query: 63 G------------INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLS 110
N H Y + + + N++ + +V V P + +S
Sbjct: 55 HSHLGHIQIYRKGYNDHGSSAPFDYLIEEADVVMNKIASLDNVELVTPRIMFSGMISTGE 114
Query: 111 SGGSGVLVRGISN--SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKI 168
+ S + + ++N G + +
Sbjct: 115 NTVSAYCQGVNPQGETTLNKIENIKREASGLNIQEGSNLTPGDKFDVILGRGLAKNLGVK 174
Query: 169 NILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIE 228
S +G I + V G+F ++D+ + +S+ AQ E + +
Sbjct: 175 PGDSIVLLTNTVGGSINAFDLIVKGIFFTASKEFDDRALRLSIDTAQKLIRTEG-IQTLV 233
Query: 229 VFVKDPDAIEKTHENIVRILGN---GVVVIDWQQR 260
V + + E+ E I++ + + + + W Q
Sbjct: 234 VMLDKTENTEQAKEEILKTIQSMDAELEIRTWNQL 268
>gi|220928300|ref|YP_002505209.1| hypothetical protein Ccel_0857 [Clostridium cellulolyticum H10]
gi|219998628|gb|ACL75229.1| protein of unknown function DUF214 [Clostridium cellulolyticum H10]
Length = 459
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 33/267 (12%), Positives = 83/267 (31%), Gaps = 36/267 (13%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVM--SVMNGFREDMIKRVLGINGH 67
+A R +F+NR+ + + IG++I + A ++++ S+ NG ++K I
Sbjct: 6 KIALRNIFANRRRSIL--------IGIVIFICAFLILVSNSMANGVEFQVLKGYKNIQCA 57
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
VI A RL F+ + + + + + +
Sbjct: 58 HVIVGWENLKKVNSSDATRLLFLTSNPSFELTKDAENQRAINTLNEFLEKNKDKVDGYYP 117
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVII-------------------------GKDLARNLGI 162
++ S S Y + + + +
Sbjct: 118 SIRRSISILYNGGEVQDSQFSLYGLNAKSSKLMIDSKAMSMYKGELLSEDPNAICISKQK 177
Query: 163 SIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN 222
+ DK+N+ + G R + +DN ++++ A+ ++
Sbjct: 178 AEEDKLNLGDKVTLESINPDGSRGTLDCTIKGIYANGAGWDNMYLFINEDTAKQLMKYKD 237
Query: 223 AVSGI-EVFVKDPDAIEKTHENIVRIL 248
+ + +K+ + +++ L
Sbjct: 238 GYFDLGRISLKNESDASEFAKDLDAAL 264
>gi|117619235|ref|YP_857494.1| macrolide-specific ABC-type efflux carrier [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
gi|134048475|sp|A0KMJ3|MACB2_AERHH RecName: Full=Macrolide export ATP-binding/permease protein MacB 2
gi|117560642|gb|ABK37590.1| macrolide-specific ABC-type efflux carrier [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
Length = 647
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 33/247 (13%), Positives = 80/247 (32%), Gaps = 7/247 (2%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A + ++R F ++ +G++IG+ A++ V+++ G R +I ++ + + +
Sbjct: 260 MALHAMLAHRMRTF------LTMLGIIIGIAAVVSVVALGQGARAKVIDQINAMGTNTID 313
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
D + + + D+ +L + +++ G S+ +
Sbjct: 314 IFPGKDWGDEKAASIQTLNKRDLDALLGQPYLEGASPQIAAPGQLRYRNKTSSGSIVGVG 373
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
N F R G + I A + + + + +G
Sbjct: 374 NDFFRVKGMKLTNGRLFDERDIQNRAAVAVVDGKTIESLLGKQDPVGQVVLVGTLPVRII 433
Query: 191 VLGMFRMRFPDYDNG-MVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
+ F V++ +N S + + VKD + + +L
Sbjct: 434 GVVEEETGFGRSSQSVNVWLPYSAVMSRLISQNHFSQLTIRVKDGVQPALAEQAAIELLT 493
Query: 250 NGVVVID 256
V D
Sbjct: 494 QRHGVKD 500
>gi|315173125|gb|EFU17142.1| conserved hypothetical protein [Enterococcus faecalis TX1346]
Length = 57
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 35/60 (58%), Gaps = 6/60 (10%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ A+R + N++ S ++ +G++IG+ ++I ++++ NGF+EDM+ ++
Sbjct: 1 MKRSIIWKTAFRSILKNKRR------SLLTMLGIVIGIASVITIVAIGNGFKEDMVDKLS 54
>gi|304407732|ref|ZP_07389383.1| protein of unknown function DUF214 [Paenibacillus curdlanolyticus
YK9]
gi|304343215|gb|EFM09058.1| protein of unknown function DUF214 [Paenibacillus curdlanolyticus
YK9]
Length = 391
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 31/252 (12%), Positives = 72/252 (28%), Gaps = 13/252 (5%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + +A++ ++SN+ + +S +G++IGV +I ++++ G + +
Sbjct: 1 MKLSQ--AFRMAFKSIWSNKLR------TALSMLGMLIGVATVIALVAMSEGSSRQVQAQ 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
V + + + + L + S +
Sbjct: 53 VESLGA----ANMLQVTITGRGLTTSLTKDEAMAFADIANVEGVSPIVNGSVTAKFGTTS 108
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
S + + + + +G ++ + T +
Sbjct: 109 ESYTVEGVTPEYETVRDVGFTKGRFIVDLDNVNYSKVALIGANVATDLFGTEDPVGETIL 168
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G R K L + + + L + F + V I + V D D E
Sbjct: 169 LNGSRYKVVGQLETKGDSINGSADDKILIPLATGERMFQSKG-VKSIYLKVSDTDQSELV 227
Query: 241 HENIVRILGNGV 252
+ R L
Sbjct: 228 QAQLERKLAEKF 239
>gi|110597780|ref|ZP_01386064.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
gi|110340687|gb|EAT59167.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
Length = 659
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 38/273 (13%), Positives = 98/273 (35%), Gaps = 20/273 (7%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A++ + +N+ +F +S +G+ +GV ++I +M++ G + M +++ + +++
Sbjct: 266 AFQAILANKMRSF------LSVLGIFVGVASVIAMMALGEGAKAAMQEQLKSMGSNMLSI 319
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
+ + I V V + +G N ++S
Sbjct: 320 RGGSAKIRGAAQGAGAVARFTAIDVEDIAELTTLVKNATGVVNGSARMVYGNKNWSSSLT 379
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTV 191
YG + +++ + ++I + +G+ P+G I+
Sbjct: 380 GVGYDYGTMRASTPTVGRWFTREEIQKRDKVAIIGVTVVKELFGNTNPIGGTIKINRINF 439
Query: 192 LGMFRMRF-----PDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ P ++ +V + + A ++ +SGI V V P IE+ I
Sbjct: 440 TVIGIAPAKGFSGPQDEDDVVLIPVTTAMYRVLGKDYLSGIFVEVTSPALIEQAKSTISE 499
Query: 247 IL---------GNGVVVIDWQQRYQIFFSCYES 270
++ + + D + ++ S ++
Sbjct: 500 LIRKRHRLQADDDSFNIRDMTEIQKMLSSTTQT 532
>gi|289433724|ref|YP_003463596.1| ABC transporter, permease protein, putative [Listeria seeligeri
serovar 1/2b str. SLCC3954]
gi|289169968|emb|CBH26508.1| ABC transporter, permease protein, putative [Listeria seeligeri
serovar 1/2b str. SLCC3954]
Length = 388
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 31/268 (11%), Positives = 90/268 (33%), Gaps = 20/268 (7%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M I+ +A + L S + F ++ +G++IGV ++I+++S+ +++ +
Sbjct: 1 MKIYQNV--KLALKQLLSAKFRTF------LTMLGIIIGVFSVILLISIGTAISKNVSTQ 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + ++V Y +F + + ++ Q + + V G
Sbjct: 53 LGDMGSNLVSVSFYPNNPTEKFTYKEATNLLEDGEIGSPEVMQTKAVRTNEHTDDMQVTG 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
I+++ + +R G ++ D + A ++ +
Sbjct: 113 INDAYANIKNLELAR--GRFCSEVDVRYAQKVTVIGADVAKSYFKEQNPVGKYMRISGAR 170
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ I +F +++ + A+ F +++ + K P+ +
Sbjct: 171 YLVIGVLKEKGESLFGSADKK-----LFIPITSAERLF-KTDSIDLYYIQAKSPNQVPSV 224
Query: 241 HENI----VRILGNGVVVIDWQQRYQIF 264
+ + R+ N + +
Sbjct: 225 VKQVDHKMSRLFPNDKDAYSVVNQQEAL 252
>gi|320538084|ref|ZP_08037982.1| efflux ABC transporter, permease protein [Treponema phagedenis
F0421]
gi|320145059|gb|EFW36777.1| efflux ABC transporter, permease protein [Treponema phagedenis
F0421]
Length = 405
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 36/268 (13%), Positives = 87/268 (32%), Gaps = 14/268 (5%)
Query: 1 MSIFSRFEVIVAWRYL-FSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
M +F + AW + F+ ++N F S + + I ++++ + ++ M
Sbjct: 1 MKMFL---IKSAWDNITFNKKRNTF-------SILLIAIASASILLFQGYVEYSKQGMAL 50
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
+ +G++ I+ K + ++ + +G++
Sbjct: 51 GFIQKSGNIQIRVKGLRDTFQKDANLLTAKDILQLREFCAQLPEITDIDAVLEFNGIIGT 110
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
++S F G + + + + T
Sbjct: 111 EKNSSIFWGAAYDKPHAVGITAGTPVFADDRAVVLGELLFEELEMDLDNTENFVNIMTTT 170
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+ I + S+ V G D+G+V S + F LE++ + + +F+K+ +EK
Sbjct: 171 ITGNIVTASFDVNGYLATGNFQTDSGLVITSRKAVLDLFELEDSATYLRLFLKNDKDLEK 230
Query: 240 THENIVRIL---GNGVVVIDWQQRYQIF 264
+ I +W+Q +
Sbjct: 231 VEKGIQEFFIKHNLNFETANWKQLNPEW 258
>gi|319794957|ref|YP_004156597.1| ABC transporter [Variovorax paradoxus EPS]
gi|315597420|gb|ADU38486.1| ABC transporter related protein [Variovorax paradoxus EPS]
Length = 668
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 35/245 (14%), Positives = 73/245 (29%), Gaps = 7/245 (2%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AWR ++SNR + ++ +G++IGV ++I +++V G + ++ + +
Sbjct: 286 AWRVMWSNR------FRTGLTLLGIVIGVASVIAMLAVGGGSQRQVLAQFETFGVRTMFV 339
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
V ++ + + + +V G + +
Sbjct: 340 AARAGSVRAPAAPLTMNDAETIGGLPNVEAVAPYVEDRVVVRRGNVDHSTEGGGTTVGFA 399
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTV 191
+ + FD K + + P G + +
Sbjct: 400 EVLGWTTSEGRMFDAADEASAAKVAVIGETVRKALFADGSDPVGQDILVDKVPFQVVAVL 459
Query: 192 LGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNG 251
D D+ ++ A F N + I V V+ + T E I L
Sbjct: 460 AAKGSTDGEDQDDRVIVPFSAAAARLFGHRNP-TWIAVKVRSMEQALATAEMIETRLAEQ 518
Query: 252 VVVID 256
V D
Sbjct: 519 RRVRD 523
>gi|237808008|ref|YP_002892448.1| hypothetical protein Tola_1245 [Tolumonas auensis DSM 9187]
gi|237500269|gb|ACQ92862.1| protein of unknown function DUF214 [Tolumonas auensis DSM 9187]
Length = 414
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/252 (10%), Positives = 77/252 (30%), Gaps = 16/252 (6%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ ++ R L R+ ++ + +GV+AL++ ++ F++ M+ +
Sbjct: 5 LKLSARNLMRYRRRTLLTAIL------IAVGVVALLLFVATAGSFKQVMVGGITDSMLGH 58
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + LD P +K + + S + + ++ +
Sbjct: 59 LQIHHKGYTASIDNLPLNLDLKPAAVKKVETILQSEPAIASYSERVKLGAMFSNFNESTS 118
Query: 129 L---------QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ ++ +D D ++ + ++ G K+ V
Sbjct: 119 IRLNGVDPVAEDKTVPALRQRISDGDPKGLLVEPGQILIPDLLAKGMKVKTGDSVVLVAT 178
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN-AVSGIEVFVKDPDAIE 238
G + ++ Y+ + +A+ LE + I + + + + +
Sbjct: 179 NASGSVNGKNFIVRGVLEAVTGPGGRDGYIHISDARELLRLEQPDIMEIAIRLHNIEQLP 238
Query: 239 KTHENIVRILGN 250
+ L
Sbjct: 239 SVMTKLGAQLDE 250
>gi|167034777|ref|YP_001670008.1| ABC transporter-like protein [Pseudomonas putida GB-1]
gi|166861265|gb|ABY99672.1| ABC transporter related [Pseudomonas putida GB-1]
Length = 654
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/245 (10%), Positives = 72/245 (29%), Gaps = 6/245 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +
Sbjct: 266 ALQAAWRVMWVNR------FRTALTLLGIVIGVASVVVMLAVGEGSKRQVMAQMAAFGSN 319
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
++ + LD + + ++ + G + +
Sbjct: 320 ILYLNGKPATLGEPAGTITLDDVAAIGQLPQVKHVMPVIGDKLMVRHGNNSQKFYVGGNN 379
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ + + + P G +G
Sbjct: 380 TFFPEIFNWPAVQGSFYSEADEANAAAVAVIGQKVREKMLDPGRDPLGQYILIGNVPFQV 439
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ G +G + + A + + I V D + + I ++
Sbjct: 440 IGILAGKGASSGDQDSDGRIAVPYSAAAIRLFGQRDPDYIAVAALDSTRVNQAEAAIDQL 499
Query: 248 LGNGV 252
L
Sbjct: 500 LRQRH 504
>gi|254444712|ref|ZP_05058188.1| efflux ABC transporter, permease protein [Verrucomicrobiae
bacterium DG1235]
gi|198259020|gb|EDY83328.1| efflux ABC transporter, permease protein [Verrucomicrobiae
bacterium DG1235]
Length = 375
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 42/237 (17%), Positives = 80/237 (33%), Gaps = 26/237 (10%)
Query: 15 YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKY 74
L +R + + G+ GV A++ V+S++ G M +R+L + H ++
Sbjct: 15 NLTRHRVR------ALLGAAGIAFGVAAMLTVLSIVLG-AIGMFERILSNDSHYLVF--- 64
Query: 75 YPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFS 134
+ + L F +S V G++ +
Sbjct: 65 ------ERNVSDLFFSSVPEDATRSISEMENVDTAYPMLFGIVSSDDTP---------VI 109
Query: 135 RFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS-KSYTVLG 193
+G ND I D +R + + + +G + K +G
Sbjct: 110 TCFGIADNDPRLDDAEWIAGDRSRFGQEENTIYLGLRAAEFAEVEVGEEVPIGKDILTVG 169
Query: 194 MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN 250
++NG V+M L+ AQ +F+ E S I V +K+ + E I +
Sbjct: 170 GILKLENGFENGGVFMPLKLAQEFFHKEGFSSIIAVKLKEVSKGDVFKEEIEAEYPD 226
>gi|281425451|ref|ZP_06256364.1| macrolide efflux ABC transporter, permease/ATP-binding protein
[Prevotella oris F0302]
gi|281400444|gb|EFB31275.1| macrolide efflux ABC transporter, permease/ATP-binding protein
[Prevotella oris F0302]
Length = 412
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 35/259 (13%), Positives = 78/259 (30%), Gaps = 13/259 (5%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A R + +N+ +F ++ +G++IGV ++I ++++ G ++ + + V + ++
Sbjct: 7 IKIAVRAILANKMRSF------LTALGIIIGVASVITMLAIGQGSKKSIQENVAQMGSNM 60
Query: 69 VIQQKYYPL----VDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
++ + L +A +SS G + + S
Sbjct: 61 IMIHPGADMRGGVRQDASSMETLKMQDYNNIKDQCDYIKAISPVVSSSGQWIYGNNNTPS 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVII---GKDLARNLGISIGDKINILSPYGDVTPMG 181
+ + D + I K + N P G V G
Sbjct: 121 SIYGVNQDYLEIRQLSVEDGEMFTENDIKGAAKVCVVGHTVVDNLFPNGADPVGKVVRFG 180
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ + +V + +S I+ D EK
Sbjct: 181 SIPFRIVGVLKKKGYNSMGMDQDDLVLAPYTTVMKRILAQTYLSEIQCSAITEDLTEKAI 240
Query: 242 ENIVRILGNGVVVIDWQQR 260
E + IL + D
Sbjct: 241 EQLTEILRRDHKLKDATDT 259
>gi|269303127|gb|ACZ33227.1| ABC transporter, permease protein [Chlamydophila pneumoniae
LPCoLN]
Length = 503
Score = 47.8 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+FE VA +YL + +I S S + + V IV +SV++G + I+
Sbjct: 1 MKFEFSVALKYLIPGKGRLSSAIVSLFSVGIISLVVWLSIVFISVIHGLEQRWIE 55
>gi|47091541|ref|ZP_00229338.1| ABC transporter, permease protein, putative [Listeria monocytogenes
str. 4b H7858]
gi|254932700|ref|ZP_05266059.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
gi|254994214|ref|ZP_05276404.1| ABC transporter, permease protein, putative [Listeria monocytogenes
FSL J2-064]
gi|47020218|gb|EAL10954.1| ABC transporter, permease protein, putative [Listeria monocytogenes
str. 4b H7858]
gi|293584256|gb|EFF96288.1| conserved hypothetical protein [Listeria monocytogenes HPB2262]
Length = 392
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 30/268 (11%), Positives = 86/268 (32%), Gaps = 20/268 (7%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ + +A + L S + F ++ +G++IGV ++I+++S+ +++ +
Sbjct: 5 MTLLQ--SIKLALKQLLSTKFRTF------LTMLGIIIGVFSVILLVSIGEAISKNVSTQ 56
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + +++ Y + +F + + ++ Q S + V G
Sbjct: 57 LGDMGSNLLTVNFYSDNPNDKFTYKDAKKLLNEDEIGSPEVMQTKEVRTSEKTASNQVAG 116
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
I+ S + + D + V I + I M
Sbjct: 117 INEYYASIKNLELASGRFCSNVDVIYAQKVTIIGSEIAKTYFKEQNPIGEYLQIAGARYM 176
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK- 239
+G+ + + +++ + A+ F + V + K + +
Sbjct: 177 VIGVLKEKGES-------LFGSADKKLFIPISSAERLF-KTDTVDLYYIQTKKVEQVPAA 228
Query: 240 ---THENIVRILGNGVVVIDWQQRYQIF 264
+ + + + + Q
Sbjct: 229 VKVVKKKMSQFFPSNEDAYTVANQQQAL 256
>gi|238020455|ref|ZP_04600881.1| hypothetical protein GCWU000324_00337 [Kingella oralis ATCC 51147]
gi|237867435|gb|EEP68441.1| hypothetical protein GCWU000324_00337 [Kingella oralis ATCC 51147]
Length = 646
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 31/237 (13%), Positives = 77/237 (32%), Gaps = 3/237 (1%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ A++ V+++ NG +E ++K + + +++ D + +
Sbjct: 269 SLLTMLGIIIGIAAVVSVVALGNGTQEKILKDISSMGTNMISIFPGKGFGDRRSGKVKTL 328
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
+ D + ++ G S G+ + + + + G
Sbjct: 329 TVADSQAIAGLSYVESTTPGSYSSGTLTYKNIDLTASVAGVGEQYFDVRGEKIGLGRLFN 388
Query: 149 GVIIGKDLARNLGISIGDKI---NILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNG 205
+ + + K N +P G V + + + D+
Sbjct: 389 AEDVKDNAQVVVIDENTQKKLFPNGENPLGKVVLLKKRPLTVIGVLKKDDNQFEAPSDSL 448
Query: 206 MVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQ 262
+Y + +S I V VK + + I +L D+ +
Sbjct: 449 QIYTPYTTLMSQISGNKYISNITVKVKPDVDTQTAEKGITELLRARHGTEDFFTQNS 505
>gi|317478775|ref|ZP_07937928.1| hypothetical protein HMPREF1007_01044 [Bacteroides sp. 4_1_36]
gi|316905110|gb|EFV26911.1| hypothetical protein HMPREF1007_01044 [Bacteroides sp. 4_1_36]
Length = 406
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A R L +N+ AF ++ +G++IGV ++I ++++ G ++ + ++ + ++
Sbjct: 7 FKIALRALNNNKLRAF------LTMLGIIIGVASVITMLAIGQGSKKSIQAQISEMGSNM 60
Query: 69 VIQQKYYPL 77
++ +
Sbjct: 61 IMIHPGADM 69
>gi|298250517|ref|ZP_06974321.1| protein of unknown function DUF214 [Ktedonobacter racemifer DSM
44963]
gi|297548521|gb|EFH82388.1| protein of unknown function DUF214 [Ktedonobacter racemifer DSM
44963]
Length = 471
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 35/250 (14%), Positives = 79/250 (31%), Gaps = 16/250 (6%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQ--- 72
L +N+ S ++ +G++IGV A+IV++SV + +R+ +N + ++ +
Sbjct: 78 LRANKMR------SLLTSLGIIIGVGAVIVMVSVSQSNAAVINQRLSTLNPNELVIRSGS 131
Query: 73 ------KYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
+ D + + + VS A SG I
Sbjct: 132 ANSSGVRQGQGSLQTLTQADADALSSRVPNVSAVSPIANASGQVIFQGQNWASTIQGVYP 191
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
S+ + + + + + + ++ + P G + +
Sbjct: 192 SFQTINSWQMQEGNFISDTDEQSGGAVAVIGQTVADNLFTP-QGVDPLGQQIRIRNVPFT 250
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ + +VY+ AQ S I+V V D + + +
Sbjct: 251 VVGVLASKGASAGQQDADDVVYVPFSTAQRRLTGSQFASSIDVLVSDQSHMTDAQSAVQQ 310
Query: 247 ILGNGVVVID 256
+L + D
Sbjct: 311 VLEQQHHIGD 320
>gi|217032195|ref|ZP_03437694.1| hypothetical protein HPB128_186g61 [Helicobacter pylori B128]
gi|216946185|gb|EEC24794.1| hypothetical protein HPB128_186g61 [Helicobacter pylori B128]
Length = 301
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 55/133 (41%), Gaps = 2/133 (1%)
Query: 139 NVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMR 198
N ++ +I+GK L +L + + K ++ + T + + K +T+ G F
Sbjct: 29 NENDLSKNPFNLIVGKSLRYSLNLDLNQKADLFFTELEPTGLTLSPIMKRFTIKGDFDSG 88
Query: 199 FPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDP-DAIEKTHENIVRILGNGVVVID 256
YD +Y SLQ L G+ V+ K P IE + I +G+ +
Sbjct: 89 LKSYDMSYMYASLQAISAIRRLPLGLYDGVHVYSKTPMKDIEILRNALKTINHHGIGIEG 148
Query: 257 WQQRYQIFFSCYE 269
W Q+ FFS E
Sbjct: 149 WWQQNGNFFSAME 161
>gi|296127111|ref|YP_003634363.1| hypothetical protein Bmur_2089 [Brachyspira murdochii DSM 12563]
gi|296018927|gb|ADG72164.1| protein of unknown function DUF214 [Brachyspira murdochii DSM
12563]
Length = 405
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 36/270 (13%), Positives = 78/270 (28%), Gaps = 19/270 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A+ L+ N+ +++ I ++++S N F ++ I + +G
Sbjct: 4 IKLAFDNLWYNKTRTILNMILIIVS-------FVSLMMISGYNNFTKEGIITSINTSGGS 56
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
++ N L +++ + + S +
Sbjct: 57 LVIADKSYWDKKSEKINMLKDND--FEIIYKKLETINEVNDYQKKLDISGLIGNESKSKF 114
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIG------KDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + G I L ++LG + +T G
Sbjct: 115 FSGYAYEKPSKIMSSVSLKSGTPIFDDDINTMVLGKDLGEFFNLNYDEEHYLNLMTDFGE 174
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
GI S +G+ + D +Y L F LE + +++KD E+
Sbjct: 175 GISLGSLMAVGLISLNNSASDAITIYCPLNAVYEVFGLEYGDAHNLLIYLKDYKKAEEIK 234
Query: 242 ENIVRILGNG---VVVIDWQQRYQIFFSCY 268
N+ + DW+ S
Sbjct: 235 NNLNKYFNENNLNYEAKDWKDLNAFLLSVI 264
>gi|288818249|ref|YP_003432597.1| ABC transporter permease protein [Hydrogenobacter thermophilus
TK-6]
gi|288787649|dbj|BAI69396.1| ABC transporter permease protein [Hydrogenobacter thermophilus
TK-6]
Length = 403
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 37/266 (13%), Positives = 94/266 (35%), Gaps = 15/266 (5%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
++ R +N+ +F ++ +G++IGV A+I ++SV G + +++ I ++
Sbjct: 7 FWMSIRSFRANKLRSF------LTTLGIVIGVSAVIAMLSVGEGASRKIQEQIASIGSNL 60
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+I + + V V ++ +GV + ++S
Sbjct: 61 LIVLPGSTTAGGVRMGLGTQPTLSLTDAQAVVRECPSVLRVAPIKAGVAQLVYGSMNWST 120
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
++ Y + + V +D+ +++ + + + + P+G IR K
Sbjct: 121 GVVGTTQDYFEIRDWKVVSGRVFGEEDVRSASKVAVLGQTVVENLFVGDDPVGKVIRIKG 180
Query: 189 YTVL------GMFRMRFPDYDNGMVYMSLQEAQLYF---NLENAVSGIEVFVKDPDAIEK 239
+ + + V + + AQ + + + V P++IE
Sbjct: 181 MPFMVIGVLERKGQSPMGQDQDDTVIVPISSAQRFLFGTAFPGQIDRMMVQALGPNSIED 240
Query: 240 THENIVRILGNGVVVIDWQQRYQIFF 265
+ + + + D+ R F
Sbjct: 241 AEKEVKQTILQRHRQEDFTVRNLSQF 266
>gi|226223025|ref|YP_002757132.1| ABC transporter, ATP-binding protein [Listeria monocytogenes
Clip81459]
gi|225875487|emb|CAS04188.1| Putative ABC transporter, ATP-binding protein [Listeria
monocytogenes serotype 4b str. CLIP 80459]
Length = 392
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 31/268 (11%), Positives = 86/268 (32%), Gaps = 20/268 (7%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ + +A + L S + F ++ +G++IGV ++I+++S+ +++ +
Sbjct: 5 MTLLQ--SIKLALKQLLSTKFRTF------LTMLGIIIGVFSVILLVSIGEAISKNVSTQ 56
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + +++ Y + +F + + ++ Q S + V G
Sbjct: 57 LGDMGSNLLTVNFYSDNPNDKFTYKDAKKLLNEDEIGSPEVMQTKEVRTSEKTASNQVAG 116
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
I+ S + + D + V I + I M
Sbjct: 117 INEYYASIKNLELASGRFCSNVDVIYAQKVTIIGSEIAKTYFKEQNPIGEYLQIAGARYM 176
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK- 239
+G+ + + +++ + A+ F + V + K + +
Sbjct: 177 VIGVLKEKGES-------LFGSADKKLFIPISSAERLF-KTDTVDLYYIQTKKVEQVPAA 228
Query: 240 ---THENIVRILGNGVVVIDWQQRYQIF 264
+ + + N + Q
Sbjct: 229 VKVVKKKMRQFFPNNEDAYTVVNQQQAL 256
>gi|322433713|ref|YP_004215925.1| protein of unknown function DUF214 [Acidobacterium sp. MP5ACTX9]
gi|321161440|gb|ADW67145.1| protein of unknown function DUF214 [Acidobacterium sp. MP5ACTX9]
Length = 407
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 32/238 (13%), Positives = 80/238 (33%), Gaps = 17/238 (7%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + +A + L++N+ S ++ +GV+IGV ++I V++++NG +I++
Sbjct: 1 MEIKEALKLALQSLWANKMR------SVLTLLGVVIGVASVIAVVTLVNGANMFVIQKFS 54
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVL----V 118
V + ++ + +++ + G V
Sbjct: 55 RYGADVFTISRQPAVITNVDDFVKFAKRKNILFADYKYVEENCRRCAGMGAQQATSGKLV 114
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNL----GISIGDKINILSPY 174
RG + ++ + + D G+G+ + + G + + +
Sbjct: 115 RGTQAITDAQIRGYTWQMPQLQNLDITEGRGLTDTDEEHASHVAIIGTDVEENLFAGVDP 174
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK 232
G V F + V + L Q + + V+ ++VK
Sbjct: 175 IGQELRVDGSPYTVVGVTEKQGSTFGQSQDNFVGVPLTTYQKSYGTQKTVT---IYVK 229
>gi|189466248|ref|ZP_03015033.1| hypothetical protein BACINT_02619 [Bacteroides intestinalis DSM
17393]
gi|189434512|gb|EDV03497.1| hypothetical protein BACINT_02619 [Bacteroides intestinalis DSM
17393]
Length = 406
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A R L +N+ AF ++ +G++IGV ++I ++++ G ++ + ++ + ++
Sbjct: 7 FKIALRALANNKLRAF------LTMLGIIIGVASVITMLAIGQGSKKSIQAQISEMGSNM 60
Query: 69 VIQQK 73
++
Sbjct: 61 IMIHP 65
>gi|118444520|ref|YP_878826.1| ABC transporter, permease [Clostridium novyi NT]
gi|118134976|gb|ABK62020.1| ABC transporter, permease [Clostridium novyi NT]
Length = 394
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 37/221 (16%), Positives = 78/221 (35%), Gaps = 2/221 (0%)
Query: 30 FISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDF 89
++ IG+++G+ +LI ++S+ NG +D+ + ++ +G I + P D N F
Sbjct: 23 ILTLIGIVLGISSLIAIVSLGNGVGDDIKESIISSDGTRSISLMFTPGEDSSKEQNLDAF 82
Query: 90 IPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKG 149
VI + G V S + + + S N S G R
Sbjct: 83 NDSVISKIKNTKGVDSVEKEFSSMTQMEIDNKSEMISINCSNENSN-IGKEKIISGRTFN 141
Query: 150 VIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYM 209
+++R I+ K + + + V M +Y+
Sbjct: 142 KKEFSNVSRVCIINKTLKDKLFKDDDAIGEIVQVSDKPMIVVGVMEESGASFMSFNSIYI 201
Query: 210 SLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN 250
+ F +++ +++ + I++ + IV L N
Sbjct: 202 PRPTWSITFG-DDSAKQLKICIAKDYDIKEVSKIIVDKLNN 241
>gi|268325954|emb|CBH39542.1| conserved hypothetical membrane protein, FtsX family [uncultured
archaeon]
Length = 396
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 34/255 (13%), Positives = 79/255 (30%), Gaps = 23/255 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFRE-------DMIKRV 61
++A+R + + S ++ +G+ +G+ A++ +MSV G +M +
Sbjct: 5 FLLAFRSIRERKAR------SILTVLGIAVGIAAIVSLMSVGYGMEHAITGELTEMADMI 58
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ G + + L I ++ + A V + + G
Sbjct: 59 SVMPGEIRGASYVERGSFTDRDVSDLQRIGGIMDISTMTYDAAEVEYRNKNVPIFVFGGD 118
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ + G + D VI + I ++ +G
Sbjct: 119 TKELEGFYVEPVGLKEGRWLRENDYKGCVIGYRVANDFFDEVIHVNDKLVINDEKFIVVG 178
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ + + ++++L+ A+ + + I V V D D E
Sbjct: 179 VFEKGDMLYSN---------DVDRNIFLTLRAAKEVLQT-DEIKYIIVRVYDIDEAEGIA 228
Query: 242 ENIVRILGNGVVVID 256
E I + + + D
Sbjct: 229 EEIEERINDNHGLDD 243
>gi|256819235|ref|YP_003140514.1| hypothetical protein Coch_0390 [Capnocytophaga ochracea DSM 7271]
gi|256580818|gb|ACU91953.1| protein of unknown function DUF214 [Capnocytophaga ochracea DSM
7271]
Length = 406
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 25/247 (10%), Positives = 76/247 (30%), Gaps = 13/247 (5%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+AWR L N+ + ++ +G++IGV ++I ++++ G ++ + + + + ++
Sbjct: 7 FKIAWRALLLNKTR------AMLTMLGIIIGVGSVITMLAIGEGSKKSIKENISKMGTNM 60
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + ++ ++ + + +S SG +++
Sbjct: 61 LNIRPGAGMMGGVRMSMSDMQSLKMTDYEALKKEGTLLKYVSPVVSGNGQSIAGGNNWPT 120
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARN-------LGISIGDKINILSPYGDVTPMG 181
+ Y + + ++ ++ N +P G
Sbjct: 121 SIYGVNTEYLPIREWSVAEGSMFGEDEITNFSKVAVIGQTVAKNLFTNGENPIGQTIRFK 180
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ F + ++ Q + + I V + E
Sbjct: 181 NIPFKVIGILTKKGESNFGQDQDDVIIAPYTTVQKRILAQTFLQSIVASVLNESQSENAV 240
Query: 242 ENIVRIL 248
+ +IL
Sbjct: 241 NQVKKIL 247
>gi|119475576|ref|ZP_01615929.1| putative ABC transporter, permease protein [marine gamma
proteobacterium HTCC2143]
gi|119451779|gb|EAW33012.1| putative ABC transporter, permease protein [marine gamma
proteobacterium HTCC2143]
Length = 407
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 35/268 (13%), Positives = 85/268 (31%), Gaps = 11/268 (4%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ +AWR +F N + F ++ + + ++AL++ VM G + M++
Sbjct: 1 MNLILRLAWRNIFRNGRRTF------LTCLLLACSLIALVLTDGVMRGMMDLMVETTTRT 54
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
K + D K+ V+ +A+ SG ++
Sbjct: 55 FAGEAQAHKKGFRDSFDVDLYIEDISIVANKLEADVAIEAYTIRTMSGAMMSSADNMAGG 114
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKD---LARNLGISIGDKINILSPYGDVTPMG 181
+ + G + + + L + ++ G
Sbjct: 115 LLWGVDGEREAKVSKLKEALVDGSYLTGKDNEILIGEELADLLSVELGDRIVVTLSQVDG 174
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV-FVKDPDAIEKT 240
+ + + G+F+ + D+ M++++L +++ +E + FV DA++
Sbjct: 175 GELSQALFRLSGIFKFGMREIDSSMIFINLAQSRKILGMEAGAHQVAFNFVNAKDAVDPE 234
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCY 268
I + + W S
Sbjct: 235 SATIRSLSTGDIEAASWVDLQPQM-SAM 261
>gi|110598239|ref|ZP_01386515.1| Protein of unknown function DUF214 [Chlorobium ferrooxidans DSM
13031]
gi|110340154|gb|EAT58653.1| Protein of unknown function DUF214 [Chlorobium ferrooxidans DSM
13031]
Length = 421
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 34/250 (13%), Positives = 84/250 (33%), Gaps = 20/250 (8%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A + +N+ +F ++ +GV+IG++A+ ++ + +NG K + +
Sbjct: 15 SLKMALFQIRANKTRSF------LTALGVIIGIVAITMMGTAINGIDRGFEKSLAMLGYD 68
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
V+ QK Q+ R A + + +
Sbjct: 69 VIYVQKSSWSTMGQWWLYRNRPDLKTEYAAQLNRIIADDPRSELSIAVPQMSTYIATAKY 128
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL---------SPYGDVT 178
+N F ++D+ + + S G ++ + P
Sbjct: 129 RDRNLEQVFSLGTTHDYLQTASGALSAGRFFTPAESAGSEMVCVVGDDIATGLFPNESAL 188
Query: 179 PMGMGIRSKSYTVLGMFRMRFP----DYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
+ ++S+ ++G FR + + + M L + + ++ I V +K+
Sbjct: 189 GKSIQLKSRKCRIIGTFRKQGKFLGLFSFDNQIIMPLGAFERIYGKNMFIT-IRVKIKEQ 247
Query: 235 DAIEKTHENI 244
+E E +
Sbjct: 248 SRVEPAKEEL 257
>gi|91203198|emb|CAJ72837.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 402
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 29/224 (12%), Positives = 70/224 (31%), Gaps = 11/224 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A R + N+ S ++ +G++IGV A+IV++ + G ++ + K++ + +V
Sbjct: 5 LKIALRAILRNKLR------SSLTILGIVIGVGAVIVMVGIGQGAKDLIEKQIESLGTNV 58
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+I + + ++ + V + + +
Sbjct: 59 LIIIPVSTSHTAARGTEGTITLTAEDVAAIAKECREVSHVSANLRTASQVVYGNQNWSTS 118
Query: 129 LQNSFSRFYGNVSND-----FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + + F R + V I + + + L P G +
Sbjct: 119 IVGIHPDYQIIRNWELEAGRFIRSQDVKIMAKVCVLGQTVVVNLFGSLDPVGRWIRINNI 178
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGI 227
+ + + V M Q VS I
Sbjct: 179 PFKVIGVLKAKGQSPMGTDQDDTVLMPYTTVQRKIMGVTHVSAI 222
>gi|261325717|ref|ZP_05964914.1| ABC transporter [Brucella neotomae 5K33]
gi|261301697|gb|EEY05194.1| ABC transporter [Brucella neotomae 5K33]
Length = 494
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 32/237 (13%), Positives = 75/237 (31%), Gaps = 8/237 (3%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A R L +N + ++ +G++IGV +++ ++++ G + ++ R+ + ++
Sbjct: 264 KMALRALRAN------IFRTVLTLLGIIIGVSSVVTMLAIGTGAQNTILDRINAMGTDLI 317
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ + L + A + + +
Sbjct: 318 LLRPAMAGFRGSGSIATLVPQDADAILELPNVKSAVPEVTGTVTLRRGNVDYQSQANGTV 377
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKI--NILSPYGDVTPMGMGIRSK 187
V++ + I LG ++ + + +P GD +
Sbjct: 378 PAFSEAKSWKVASGSFITQNDIDTYAPVAVLGTTVVKTLFPDGSNPVGDYILIQKIPFQI 437
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
T+ + +V + L L + V I V VKD I+ T I
Sbjct: 438 IGTLEPKGAGFGGSDQDDVVVVPLSTGNLRLFGQKYVRSITVQVKDSSLIDTTQNQI 494
>gi|268325353|emb|CBH38941.1| putative macrolide ABC transporter, permease protein [uncultured
archaeon]
Length = 396
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 34/255 (13%), Positives = 79/255 (30%), Gaps = 23/255 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFRE-------DMIKRV 61
++A+R + + S ++ +G+ +G+ A++ +MSV G +M +
Sbjct: 5 FLLAFRSIRERKAR------SILTVLGIAVGIAAIVSLMSVGYGMEHAITGELTEMADMI 58
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ G + + L I ++ + A V + + G
Sbjct: 59 SVMPGEIRGASYVERGSFTDRDVSDLQRIGGIMDISTMTYDAAEVEYRNKNVPIFVFGGD 118
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ + G + D VI + I ++ +G
Sbjct: 119 TKELEGFYVEPVGLKEGRWLRENDYKGCVIGYRVANDFFDEVIHVNDKLVINDDKFIVVG 178
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ + + ++++L+ A+ + + I V V D D E
Sbjct: 179 VFEKGDMLYSN---------DVDRNIFLTLRAAKEVLQT-DEIKYIIVRVYDIDEAEGIA 228
Query: 242 ENIVRILGNGVVVID 256
E I + + + D
Sbjct: 229 EEIEERINDNHGLDD 243
>gi|308751846|gb|ADO45329.1| protein of unknown function DUF214 [Hydrogenobacter thermophilus
TK-6]
Length = 404
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 37/266 (13%), Positives = 94/266 (35%), Gaps = 15/266 (5%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
++ R +N+ +F ++ +G++IGV A+I ++SV G + +++ I ++
Sbjct: 8 FWMSIRSFRANKLRSF------LTTLGIVIGVSAVIAMLSVGEGASRKIQEQIASIGSNL 61
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+I + + V V ++ +GV + ++S
Sbjct: 62 LIVLPGSTTAGGVRMGLGTQPTLSLTDAQAVVRECPSVLRVAPIKAGVAQLVYGSMNWST 121
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
++ Y + + V +D+ +++ + + + + P+G IR K
Sbjct: 122 GVVGTTQDYFEIRDWKVVSGRVFGEEDVRSASKVAVLGQTVVENLFVGDDPVGKVIRIKG 181
Query: 189 YTVL------GMFRMRFPDYDNGMVYMSLQEAQLYF---NLENAVSGIEVFVKDPDAIEK 239
+ + + V + + AQ + + + V P++IE
Sbjct: 182 MPFMVIGVLERKGQSPMGQDQDDTVIVPISSAQRFLFGTAFPGQIDRMMVQALGPNSIED 241
Query: 240 THENIVRILGNGVVVIDWQQRYQIFF 265
+ + + + D+ R F
Sbjct: 242 AEKEVKQTILQRHRQEDFTVRNLSQF 267
>gi|146298246|ref|YP_001192837.1| hypothetical protein Fjoh_0483 [Flavobacterium johnsoniae UW101]
gi|146152664|gb|ABQ03518.1| protein of unknown function DUF214 [Flavobacterium johnsoniae
UW101]
Length = 373
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 27/233 (11%), Positives = 70/233 (30%), Gaps = 5/233 (2%)
Query: 42 ALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVS 101
+IV ++ G ++ + ++V NG ++I + I
Sbjct: 1 MMIVSVATGIGLQQKIREKVSAFNGQIIISNYDNNNSEITLIPISKKQDFYPKFKSVPEV 60
Query: 102 GQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFD-RGKGVIIGKDLARNL 160
+G + + + +++ +
Sbjct: 61 SHIQAIASKAGIIRTENAFEGIVFKGVGADYNWNNIKEYLVEGRLPDFSKSLNEEVIISR 120
Query: 161 GISIGDKINILSPYGDVT---PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLY 217
++ + + + G + + + G+F F D+D + ++ Q
Sbjct: 121 FLADRLNLKLGDSFNTFFVKEEQGKLPNIRRFKIAGIFSSGFQDFDASYIIGDIRHIQRI 180
Query: 218 FNLE-NAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + EVFVKD I++T +I + + + ++Y F +
Sbjct: 181 NKWNADQIGAFEVFVKDFTQIKETGNHIYEQIPSNLDTKTITEKYNYIFDWLQ 233
>gi|297379984|gb|ADI34871.1| lipoprotein release system transmembrane protein [Helicobacter
pylori v225d]
Length = 348
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 2/133 (1%)
Query: 139 NVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMR 198
N ++ F +I+GK L +L + + K ++ + T + + K +T+ G F
Sbjct: 76 NENDLFKNPFNLIVGKSLRYSLNLDLNQKADLFFTELEPTGLTLSPIMKRFTIKGDFDSG 135
Query: 199 FPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDP-DAIEKTHENIVRILGNGVVVID 256
YD +Y SLQ L G+ V+ K P IE + I +G+ +
Sbjct: 136 LKSYDMSYMYSSLQAISAIRRLPLGLYDGVHVYSKTPMKDIEILRNALKTINHHGIGIEG 195
Query: 257 WQQRYQIFFSCYE 269
W Q+ FFS E
Sbjct: 196 WWQQNGNFFSAME 208
>gi|224539333|ref|ZP_03679872.1| hypothetical protein BACCELL_04238 [Bacteroides cellulosilyticus
DSM 14838]
gi|224519052|gb|EEF88157.1| hypothetical protein BACCELL_04238 [Bacteroides cellulosilyticus
DSM 14838]
Length = 406
Score = 47.5 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A R L +N+ AF ++ +G++IGV ++I ++++ G ++ + ++ + ++
Sbjct: 7 FKIALRALANNKLRAF------LTMLGIIIGVASVITMLAIGQGSKKSIQAQIAEMGSNM 60
Query: 69 VIQQKYYPL 77
++ +
Sbjct: 61 IMIHPGGDM 69
>gi|300728015|ref|ZP_07061391.1| macrolide export ATP-binding/permease protein MacB [Prevotella
bryantii B14]
gi|299774730|gb|EFI71346.1| macrolide export ATP-binding/permease protein MacB [Prevotella
bryantii B14]
Length = 276
Score = 47.1 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F+ +A R +F+++ +F ++ +G++IG+ ++I ++++ G ++ + +
Sbjct: 3 FTNL-FKIALRAIFASKMRSF------LTALGIIIGIASVITMLAIGQGTKKSIQANISS 55
Query: 64 INGHVVI 70
+ ++++
Sbjct: 56 MGSNMIM 62
>gi|268316027|ref|YP_003289746.1| hypothetical protein Rmar_0456 [Rhodothermus marinus DSM 4252]
gi|262333561|gb|ACY47358.1| protein of unknown function DUF214 [Rhodothermus marinus DSM 4252]
Length = 412
Score = 47.1 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 30/250 (12%), Positives = 80/250 (32%), Gaps = 16/250 (6%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
++ A R + +++ + ++ +G++IG++A+ ++ +V+NG D + + + V
Sbjct: 12 LMAALRAIAAHKLR------AVLTTLGIIIGIVAVTLMATVINGIERDFNESLSELGTDV 65
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ +K+ +V PD+ L V + +++ + +
Sbjct: 66 LYVEKWPWIVGPGSRWWEYINRPDITPELADVIEERARYVVAAVPVLDRMGTARYGGTTV 125
Query: 129 LQNSFSRFYGNVSNDF---------DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + + + + P G
Sbjct: 126 SSLTIVGAEADYPRVHAVDLALGRFYTEVEERSARAVCVLGAEVASRLFPVEQPLGKFIR 185
Query: 180 -MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
G + P + V++ + +F + N I V V DP+ +
Sbjct: 186 LSGHRCQVIGVLQRKGSGPDSPASTDTQVFIPFRTYARFFGIRNRSVSIHVKVVDPELMA 245
Query: 239 KTHENIVRIL 248
+ + +L
Sbjct: 246 LAKDELTGVL 255
>gi|254974098|ref|ZP_05270570.1| ABC transporter, permease protein [Clostridium difficile QCD-66c26]
gi|255091497|ref|ZP_05320975.1| ABC transporter, permease protein [Clostridium difficile CIP
107932]
gi|255313225|ref|ZP_05354808.1| ABC transporter, permease protein [Clostridium difficile QCD-76w55]
gi|255515915|ref|ZP_05383591.1| ABC transporter, permease protein [Clostridium difficile QCD-97b34]
gi|255649009|ref|ZP_05395911.1| ABC transporter, permease protein [Clostridium difficile QCD-37x79]
gi|260682200|ref|YP_003213485.1| ABC transporter permease [Clostridium difficile CD196]
gi|260685799|ref|YP_003216932.1| ABC transporter permease [Clostridium difficile R20291]
gi|260208363|emb|CBA60859.1| ABC transporter, permease protein [Clostridium difficile CD196]
gi|260211815|emb|CBE02203.1| ABC transporter, permease protein [Clostridium difficile R20291]
Length = 822
Score = 47.1 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 29/248 (11%), Positives = 61/248 (24%), Gaps = 8/248 (3%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FE +AW L N+ I+I S I + V +S + +
Sbjct: 431 IKNFERHLAWLNLKRNKGRTIITILSLFMSI-------TVFVALSEFSNVLDVSRSVSNL 483
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
G + + + + + +
Sbjct: 484 KEGDFSLTNEISGFDKSTLDKIDKMKNVNRTSFIKYSEYKQGEIDTDINFENSGEMLKII 543
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + + K+ + + L P +T
Sbjct: 544 GIDEQTLKDLMPSITDSILEDFKNGSICFIKNPIAISTPGVKTRHTNLKPKDSITINKKQ 603
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ S F + V + N +N + I ++ KD +E+ +
Sbjct: 604 LDIYSTVDKMFFLQGNGWINGVDVIVYNSVYNTLTN-KNKFNQINIYAKDKSKLEQIRLS 662
Query: 244 IVRILGNG 251
I +I N
Sbjct: 663 IEQICENN 670
>gi|225011687|ref|ZP_03702125.1| protein of unknown function DUF214 [Flavobacteria bacterium
MS024-2A]
gi|225004190|gb|EEG42162.1| protein of unknown function DUF214 [Flavobacteria bacterium
MS024-2A]
Length = 402
Score = 47.1 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 20/98 (20%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Query: 172 SPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVF 230
+ + +TV+G++ FP+ D ++Y L++ Q + N + G E+F
Sbjct: 164 EAFFQNQSGEGLPNRRRFTVVGIYFSGFPEIDQNLIYGDLRQIQRLNQWDSNQIGGYELF 223
Query: 231 VKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
V D AI+ + + I L + + R+ +
Sbjct: 224 VNDFKAIDPSAKKIYERLPSELNTSSITDRFSGIYQWI 261
>gi|148653631|ref|YP_001280724.1| ABC transporter-like protein [Psychrobacter sp. PRwf-1]
gi|148572715|gb|ABQ94774.1| ABC transporter related [Psychrobacter sp. PRwf-1]
Length = 696
Score = 47.1 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 34/259 (13%), Positives = 82/259 (31%), Gaps = 14/259 (5%)
Query: 12 AWRY----LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
A+R + +++ + ++ +G++IG+ +++ V+ + G ++ ++ + + +
Sbjct: 302 AFRMSVLAMRAHKMR------TLLTMLGIIIGIASVVSVVGLGQGSQQQILSNISSLGTN 355
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ YP D + N + PD K + VS + V R I S
Sbjct: 356 TITVIDGYPYGDPRRRYNDDNLTPDDAKAVANQPYVVSVSPQLDASASVRYRNIQESSSI 415
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVII----GKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+G +D+ + ++ +P G V +G
Sbjct: 416 SGVGEDYLEVTGEKLALGQGFDEQSIALRTQDIIIDDNAKKTFFADVDNPIGQVVLIGNV 475
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ P D+ +YM + V + + +
Sbjct: 476 PGRVIGVLEPNEGGFSPSSDSPTIYMPYTTMMSRIVGGEHIDRFVVLIDNQISTSAAESA 535
Query: 244 IVRILGNGVVVIDWQQRYQ 262
I ++ D++ R
Sbjct: 536 ISDLIEGRHGADDFRTRNS 554
>gi|114800370|ref|YP_760355.1| putative macrolide efflux ABC transporter permease/ATP-binding
protein [Hyphomonas neptunium ATCC 15444]
gi|122064324|sp|Q0C1N8|MACB_HYPNA RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|114740544|gb|ABI78669.1| putative macrolide efflux ABC transporter, permease/ATP-binding
protein [Hyphomonas neptunium ATCC 15444]
Length = 645
Score = 47.1 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 36/257 (14%), Positives = 88/257 (34%), Gaps = 9/257 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
V +A+R L +N + ++ +GV+IGV A++ ++++ G R +++ R + +
Sbjct: 255 SVKMAFRSLRAN------LFRTALTLLGVVIGVSAVVAMLAIGEGSRAEVMARFESMGPN 308
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
++ + P + A + D + + A V S+ + +S
Sbjct: 309 LLFVRPGAPGTRMRGGAIATLTLEDAQALGELENILAAVPSRSTNATLRNGGNDYSSSIE 368
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARN---LGISIGDKINILSPYGDVTPMGMGI 184
+ ++ + + + + +I S G +G
Sbjct: 369 GVSETWPIAQNRDMLYGTFFTKDDVDRRIGAVVLGTTTAGNLFDDIESAVGQYVFLGGAP 428
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + + + + + + + ++ +S I + V D D I +T
Sbjct: 429 FEVAGILESKGASSWGQDQDDIALVPITTGMMRLFGQSYLSSITLAVDDTDRITETEAAA 488
Query: 245 VRILGNGVVVIDWQQRY 261
L D+Q R
Sbjct: 489 HAFLLARHGTEDFQIRN 505
>gi|327401801|ref|YP_004342640.1| hypothetical protein Arcve_1932 [Archaeoglobus veneficus SNP6]
gi|327317309|gb|AEA47925.1| protein of unknown function DUF214 [Archaeoglobus veneficus SNP6]
Length = 374
Score = 47.1 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 39/242 (16%), Positives = 80/242 (33%), Gaps = 25/242 (10%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A R L N+ S ++ +G++IGVMA + + V + + +
Sbjct: 3 FQLARRNLMRNKAR------SLLAIVGIIIGVMA-VASIGVFGESLKATVLENFQNVANE 55
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
VI Y ++ I + V ++ ++ + L G
Sbjct: 56 VIITPAYSTGHFEIDEKIARKIEKMSYVKETIAVKSGWATLEVKGKSGAANVYGMD---- 111
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ + + I+GK LA + G KI + V+ + ++
Sbjct: 112 -EKAVKDLFEAEDGSIKLKGYCIVGKSLAERFKLRAGSKIIVEGREYRVSAVLKEEGARF 170
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
N + +S+ + F+ + S I V V+D + IE I + +
Sbjct: 171 DIN-----------PNRALILSVSDFDKIFDAK--YSMIIVKVRDINEIEAFKSAIEKTI 217
Query: 249 GN 250
+
Sbjct: 218 NS 219
>gi|255305490|ref|ZP_05349662.1| ABC transporter, permease protein [Clostridium difficile ATCC
43255]
Length = 822
Score = 47.1 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 29/248 (11%), Positives = 62/248 (25%), Gaps = 8/248 (3%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FE +AW L N+ I+I S I + V +S + +
Sbjct: 431 IKNFERHLAWLNLKRNKGRTIITILSLFMSI-------TVFVALSEFSNVLDVSRSVSNL 483
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
G + + + + + +
Sbjct: 484 KEGDFSLTNEISGFDKSILDKIDNMKNVNRTSFIKYSEYKQGEIDTDINFENSGEMLKII 543
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + + + K+ + + L P +T
Sbjct: 544 GIDEQTLKDLMPSITDSTLEDFKNGSICFIKNPIAISTPGVKTRHTNLKPKDSITINKKQ 603
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ S F + V + N +N + I ++ KD +E+ +
Sbjct: 604 LDIYSTVDKMFFLQGNGWINGVDVIVYDSVYNTLTN-KNKFNQINIYAKDKSKLEQIRLS 662
Query: 244 IVRILGNG 251
I +I N
Sbjct: 663 IEQICENN 670
>gi|319902516|ref|YP_004162244.1| hypothetical protein Bache_2713 [Bacteroides helcogenes P 36-108]
gi|319417547|gb|ADV44658.1| protein of unknown function DUF214 [Bacteroides helcogenes P
36-108]
Length = 406
Score = 47.1 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A R L +N+ AF ++ +G++IGV ++I ++++ G ++ + ++ + ++
Sbjct: 7 FKIALRALSNNKLRAF------LTMLGIIIGVASVITMLAIGQGSKKSIQAQIAEMGSNM 60
Query: 69 VIQQKYYPL 77
++ +
Sbjct: 61 IMIHPGADM 69
>gi|145300463|ref|YP_001143304.1| macrolide ABC transporter permease/ATP-binding protein [Aeromonas
salmonicida subsp. salmonicida A449]
gi|142853235|gb|ABO91556.1| ABC-type macrolide transporter, fused permease and ATP-binding
domains [Aeromonas salmonicida subsp. salmonicida A449]
Length = 651
Score = 47.1 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 30/262 (11%), Positives = 87/262 (33%), Gaps = 19/262 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A R + + R F ++ +G++IG+ +++ V+++ G ++ ++ + +
Sbjct: 260 AFRMALRAMQAQRMRTF------LTMLGIIIGIASVVSVVALGRGSQQQVLANINAMGTS 313
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + A + D + + L++ + + +
Sbjct: 314 TLEIFPGSGFGDRRAEAIQTLRSEDADALAGLDYVHSVTPSLATSTTLRRGSQTVSGTVN 373
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK--INILSPYGDVTPMGMGIR 185
+ + F + G + + + + + +
Sbjct: 374 GVGDQFFQVRGYRVLQGMLFDAGSVASLAQEVVIDANSRDRLFDAGESPLGQVILLGKLP 433
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ V+ + F +N V++ A ++ + I V V+D ++ + +
Sbjct: 434 CRVIGVVARNQSGFGSDENLNVWIPHTTAMKRMLGQSYLRSISVRVQDEVSLAAAEDGLT 493
Query: 246 RILGNGVVVIDWQQRYQI--FF 265
R+L +QR+ FF
Sbjct: 494 RLL---------RQRHGSQDFF 506
>gi|238797113|ref|ZP_04640615.1| ABC transporter related [Yersinia mollaretii ATCC 43969]
gi|238718960|gb|EEQ10774.1| ABC transporter related [Yersinia mollaretii ATCC 43969]
Length = 624
Score = 47.1 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 31/249 (12%), Positives = 74/249 (29%), Gaps = 6/249 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +R AF +S +G++IG+ +++ M+V G R++++ + +
Sbjct: 235 AIKMAWRSLLGHRIRAF------LSMLGIIIGISSVVSSMAVGEGARQEILSEISQLGTS 288
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + + R DV + + +S S V + +
Sbjct: 289 TLDIRPGLGWDKPRPDLERSLTQADVELLSQQPYVDSLSPVVSKMVSAVRGEKKVMVNLA 348
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ + F + G + + + + +
Sbjct: 349 GVGSGFFQAEGLSFINGAGFNPNHVSTREPVVILQPELSDTLFAGGQNPIGEIVQLDGIP 408
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
V R +M + + + I + V+D + + +
Sbjct: 409 LRVVGVAKRAGMQFGGLLSAWMPYTSLTERISGDIPLESITLRVRDGYELNAAQRQVEVL 468
Query: 248 LGNGVVVID 256
L D
Sbjct: 469 LDQAHRQRD 477
>gi|330444546|ref|YP_004377532.1| permease domain-containing protein [Chlamydophila pecorum E58]
gi|328807656|gb|AEB41829.1| permease, putative domain protein [Chlamydophila pecorum E58]
Length = 501
Score = 47.1 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 35/89 (39%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ E +A +YL R +I S S + + + IV +SV+ G + + + +
Sbjct: 1 MKLEFCIALKYLIPRRGRISSAIVSLFSMGIISLVIWLSIVFISVIYGLEQRWLNDLSQL 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDV 93
+ + + Y + ++ + +
Sbjct: 61 HSPITLLPSETYYDSYFYQIDKHANLSNY 89
>gi|189485046|ref|YP_001955987.1| ABC-type macrolide exporter ATP-binding/permease component
[uncultured Termite group 1 bacterium phylotype Rs-D17]
gi|170287005|dbj|BAG13526.1| ABC-type macrolide exporter ATP-binding/permease component
[uncultured Termite group 1 bacterium phylotype Rs-D17]
Length = 650
Score = 47.1 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 32/245 (13%), Positives = 80/245 (32%), Gaps = 14/245 (5%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A R L N+ S +S +G+ +GV +LI + +++NG + ++ K + +
Sbjct: 256 FKEALRSLLGNKMR------SILSVLGITMGVASLIAMFAIVNGAKRNITKYIENLGKPD 309
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVS-----GQAFVSGLSSGGSGVLVRGISN 123
++ + +++ ++ I D+ + + V + + G I
Sbjct: 310 ILMVIPSLSQNDKYLKLNINDIDDLKRNVSGVRTVSGGCGREQLTIVANGKNCGTTLIGV 369
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
S ++ G + + + + + GD+ +
Sbjct: 370 SADYADLKNYYISDGRFFTEEENREKKKVAVLGKTVIKKLYGDENFNPTGKYVKINKTDF 429
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
++ V + L A + ++V VK + + E+
Sbjct: 430 QVIGVLPSK---SSNEWRDEDDKVIIPLNTALYRMFGIKELGFMDVQVKKDADMSEVSES 486
Query: 244 IVRIL 248
I++ L
Sbjct: 487 IIKRL 491
>gi|193213143|ref|YP_001999096.1| ABC transporter related [Chlorobaculum parvum NCIB 8327]
gi|193086620|gb|ACF11896.1| ABC transporter related [Chlorobaculum parvum NCIB 8327]
Length = 651
Score = 47.1 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 36/268 (13%), Positives = 90/268 (33%), Gaps = 21/268 (7%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A+R + +N+ + +S +G+++GV ++I +M++ +G R M +R+ + +++
Sbjct: 257 AFRSIAANKIR------TLLSVLGILVGVASVIAMMALGSGARASMEERLKSMGSNLLSV 310
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
+ + + V V S +G N ++S
Sbjct: 311 RGGSAKIRGSAQGSGTFTRFTRQDVEAIAEFSPLVRYASGYVTGTAQMVYLNRNWSSTVE 370
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTV 191
YG + + ++ ++I +G+ P+G I+
Sbjct: 371 GVGIEYGKMRSTIPTIGRWFTSDEIRSRRKVAIIGTTVASELFGNDDPVGQTIKINRINF 430
Query: 192 LGMFRMRF-----PDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ + + V + + A + ++ I V V D ++ E I
Sbjct: 431 RVIGILPPKGFAGHRDQDDAVLVPVTTAMHRLLGRDYLNSIYVEVTSADRLDAAKEAIDA 490
Query: 247 IL----------GNGVVVIDWQQRYQIF 264
++ + + D + Q+
Sbjct: 491 LVRKRHKLQPNDEDSFYIRDMTEFQQML 518
>gi|148262968|ref|YP_001229674.1| hypothetical protein Gura_0895 [Geobacter uraniireducens Rf4]
gi|146396468|gb|ABQ25101.1| protein of unknown function DUF214 [Geobacter uraniireducens Rf4]
Length = 387
Score = 47.1 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 27/240 (11%), Positives = 68/240 (28%), Gaps = 15/240 (6%)
Query: 14 RYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQK 73
+ + R + +G+ IG+ + + +S+ + ++ + + ++++ K
Sbjct: 9 KNITRRRGRF------VFTLLGITIGIASFVTFLSLGGNLKNEIHRESAALGANLIVTPK 62
Query: 74 YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSF 133
+ I + + + + +
Sbjct: 63 GSCAYEQVSILTGEQLPTTITMDEVAKICAIKGLTAVPFLTEKTAISNKPVAVNGILPAE 122
Query: 134 SRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLG 193
+ + D + K+ P +T G + K
Sbjct: 123 MKAFKGWEMDKGAYFSAQNEPGAVVGAVAARQFKLQ---PGSFITVRGEQLPVKGVLK-- 177
Query: 194 MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVV 253
D+ +++SL AQ F + VS + + V D I+ I + GV+
Sbjct: 178 ----ESGGRDDITIFLSLPVAQRLFKAVDRVSYVAIKVDDLTLIDSYILKIKEAVSLGVI 233
>gi|319793370|ref|YP_004155010.1| ABC transporter [Variovorax paradoxus EPS]
gi|315595833|gb|ADU36899.1| ABC transporter related protein [Variovorax paradoxus EPS]
Length = 660
Score = 47.1 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 28/243 (11%), Positives = 80/243 (32%), Gaps = 8/243 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+AWR + ++R + ++ +G++IG+ +++ ++++ G + ++ + I +
Sbjct: 269 AFRMAWRSMMAHRMR------TALTMLGIVIGITSVVSIVAIGEGAKRFVLSDIRAIGTN 322
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + + R PD+ + + G N + +
Sbjct: 323 TLDVYPGRDFGDDKAASIRTLTPPDLQAIAAQPYVHSVTPTTMRGLRLRYRSADINGNVN 382
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ ++F R + + + V + +
Sbjct: 383 GVSDAFFRVRDIQMASGTAFTAEDVRHQSQVVVIDQNTRRKLFPDGTEPVGKVILVGNLP 442
Query: 188 --SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
V + F + + +++ + GI V ++D + ++IV
Sbjct: 443 CTVIGVSQEKKSMFGENKSLNIWLPYSTGASRLFGQQHFDGITVRIRDDQPTKAAEDSIV 502
Query: 246 RIL 248
R+L
Sbjct: 503 RLL 505
>gi|305667471|ref|YP_003863758.1| hypothetical protein FB2170_14528 [Maribacter sp. HTCC2170]
gi|88709519|gb|EAR01752.1| hypothetical protein FB2170_14528 [Maribacter sp. HTCC2170]
Length = 420
Score = 47.1 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 38/279 (13%), Positives = 76/279 (27%), Gaps = 26/279 (9%)
Query: 10 IVAWRYLFSNRKNAFISIA--SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++ W+ + + K ++ S I+ +GV G+ I+++S M G + +L H
Sbjct: 1 MINWKVILNISKTHLLTRIKQSSIAALGVTFGIGTFIILVSFMTGLNGLLDGLILNRTPH 60
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
V I + P V I + L
Sbjct: 61 VHIYNEIKPSVTQPLDLYDKIENSFKIIYSIKPKFTQSKIHNALPLMQTLKSNPDVKGAI 120
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIG---------------------D 166
S + G+ + +++
Sbjct: 121 PQLKSQIFYISGSIELGGNLVGIDVLEEVRLFNFGDYIVKGSPEALNNYDNGILIGAGVA 180
Query: 167 KINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVS 225
K L V + ++G+++ D DN + +L+ Q N +
Sbjct: 181 KKMSLDIGNTVQVSTVRGDLFPLKIVGIYQSGLADIDNIQSFATLKTVQKLLGEPKNYFT 240
Query: 226 GIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIF 264
I V + D + NI + +D + F
Sbjct: 241 DINVKLFDIENAVPMARNIENQF--DLTAVDIKAANAQF 277
>gi|290969067|ref|ZP_06560602.1| efflux ABC transporter, permease protein [Megasphaera genomosp.
type_1 str. 28L]
gi|290781023|gb|EFD93616.1| efflux ABC transporter, permease protein [Megasphaera genomosp.
type_1 str. 28L]
Length = 405
Score = 47.1 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 37/259 (14%), Positives = 91/259 (35%), Gaps = 12/259 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + +A L +NR S ++ +G++IGV A+I+++++ G ++++ +
Sbjct: 1 MWFSESIHMALTSLLANRLR------SLLTMLGMIIGVAAVIIMVAIGMGVKKNITDSIS 54
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G+ ++V+ D A D + ++ LS + +
Sbjct: 55 GMGSNMVMLLPGSADSDDVQGAAGSDRNLTLDDAAAIAKEIPHIAHLSPVVNQTVPLVAG 114
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISI------GDKINILSPYGD 176
N +++ + Y + N R + DL +++ +P G
Sbjct: 115 NKNWTTTLYGVTPDYLYIRNLATRSGLFLTADDLHSRRRVAVLGLTVAKKLFQSQNPVGQ 174
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
+ + + D + ++ + L AQ + GI + V P
Sbjct: 175 TVRISGQPYRIIGVLDSKGASVWGDDQDDVILIPLTTAQERLLGITYLQGIMMQVDTPPY 234
Query: 237 IEKTHENIVRILGNGVVVI 255
I+ ++ I+ +
Sbjct: 235 IDGVQGAVINIMRQRHHIQ 253
>gi|254825787|ref|ZP_05230788.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
gi|293595031|gb|EFG02792.1| conserved hypothetical protein [Listeria monocytogenes FSL J1-194]
Length = 392
Score = 47.1 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 31/268 (11%), Positives = 86/268 (32%), Gaps = 20/268 (7%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ + +A + L S + F ++ +G++IGV ++I+++S+ +++ +
Sbjct: 5 MTLLQ--SIKLALKQLLSTKFRTF------LTMLGIIIGVFSVILLVSIGEAISKNVSTQ 56
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + +++ Y + +F + + ++ Q S + V G
Sbjct: 57 LGDMGSNLLTVNFYSDNPNDKFTYKDAKKLLNEDEIGSPEVMQTKEVRTSEKTASNQVAG 116
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
I+ S + + D + V I + I M
Sbjct: 117 INEYYASIKNLELASGRFCSNVDVIYAQKVTIIGSEIAKTYFKEQNPIGEYLQIAGARYM 176
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK- 239
+G+ + + +++ + A+ F + V + K + +
Sbjct: 177 VIGVLKEKGES-------LFGSADKKLFIPISSAERLF-KTDTVDLYYIQTKKVEQVPAA 228
Query: 240 ---THENIVRILGNGVVVIDWQQRYQIF 264
+ + + N + Q
Sbjct: 229 VKVVKKKMSQFFPNNEDAYTVVNQQQAL 256
>gi|312886444|ref|ZP_07746053.1| protein of unknown function DUF214 [Mucilaginibacter paludis DSM
18603]
gi|311301072|gb|EFQ78132.1| protein of unknown function DUF214 [Mucilaginibacter paludis DSM
18603]
Length = 407
Score = 47.1 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
MSI + + A+R L N+ AF ++ +GV+IGV ++I +M++ G ++ +
Sbjct: 1 MSIINLLNL--AFRALLRNKLRAF------LTMLGVIIGVASVIAMMAIGEGSKQSIRSS 52
Query: 61 VLGINGHVVIQQKY 74
+ G+ +++
Sbjct: 53 LSGMGSNMITIMPQ 66
>gi|222099253|ref|YP_002533821.1| hypothetical protein CTN_0279 [Thermotoga neapolitana DSM 4359]
gi|221571643|gb|ACM22455.1| Putative uncharacterized protein [Thermotoga neapolitana DSM 4359]
Length = 407
Score = 47.1 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 85/247 (34%), Gaps = 13/247 (5%)
Query: 13 WRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQ 72
R L +N+ F +S +G++IGV A+I+VMS+ G RE + +R+ + ++++
Sbjct: 11 LRSLLANKMRTF------LSMLGIVIGVTAVIMVMSLGAGMRESVTERLTSLGSNIIMVT 64
Query: 73 KYYPLVDYQFIANRLDFIPDV---IKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ IA ++ + + + S + ++ S ++
Sbjct: 65 PGFIGGRGGTIAQSVESLSEEDVSDILSMCPSVDRAIGLVNGNFLVQYRETNSRANVYAA 124
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
+ + ++A + +P G + G R +
Sbjct: 125 PYEIFQILNLKVSSGRTFTEEDSAANVAIIGQEIAYNLFENENPVGKKIYLVQGNRKLVF 184
Query: 190 TVLGMFR---MRFPDYDNGMVYMSLQEAQ-LYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++G+F + M+ + + + F +S I K P ++ I
Sbjct: 185 EIIGVFERTGSILMFNPDNMILIPYETGKFRVFQTHGNISMILATSKSPQVAQRAVMEID 244
Query: 246 RILGNGV 252
+L
Sbjct: 245 HLLYTKF 251
>gi|134298197|ref|YP_001111693.1| hypothetical protein Dred_0320 [Desulfotomaculum reducens MI-1]
gi|134050897|gb|ABO48868.1| protein of unknown function DUF214 [Desulfotomaculum reducens MI-1]
Length = 395
Score = 47.1 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 25/249 (10%), Positives = 71/249 (28%), Gaps = 13/249 (5%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ + + + N+ F ++ +GV++G + +V+++ G + ++ +N
Sbjct: 7 LKMIFSNITQNKVRTF------LTTLGVIVGTATIFLVVAIGKGAEAQVNQQYSKLNVGT 60
Query: 69 VIQQKYYPLVDYQ---FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+I +L + I + ++ + I +
Sbjct: 61 IIVMPATRGKVADPLTKKDAQLFLESENITQAFPMLRGNGDINYNNYSTSGSFMAIQPAF 120
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ + D + ++ + + N G +
Sbjct: 121 QGSNNLTIEQGRAFEEEDEQKRNKCVV----IGAELANTLTENNPSELLGQSVSINNRKF 176
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ + ++ + + A I V KD D+++ E+I
Sbjct: 177 EVIGIYNRVGDSGSGMSYDDAAFVPYSAGERFLLGTRANPTINVQAKDIDSVQSAIEDIT 236
Query: 246 RILGNGVVV 254
IL +
Sbjct: 237 NILNDNHRA 245
>gi|15643119|ref|NP_228162.1| hypothetical protein TM0351 [Thermotoga maritima MSB8]
gi|4980854|gb|AAD35438.1|AE001716_1 conserved hypothetical protein [Thermotoga maritima MSB8]
Length = 404
Score = 47.1 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 13 WRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
R L +N+ F +S +G++IGV A+I+VMS+ G RE + +R+ + ++++
Sbjct: 8 LRSLLANKMRTF------LSMLGIVIGVTAVIMVMSLGAGMRESVTERLTSLGSNIIM 59
>gi|282891126|ref|ZP_06299630.1| hypothetical protein pah_c047o020 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498943|gb|EFB41258.1| hypothetical protein pah_c047o020 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 408
Score = 47.1 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 35/254 (13%), Positives = 83/254 (32%), Gaps = 21/254 (8%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
R L R F +S +G+ GV ALI ++++ G +++ ++++ + + +I
Sbjct: 8 GIRSLLLQRLRTF------LSALGIFFGVAALIAMLAIGEGAKQETLRQIEQLGMNHIIL 61
Query: 72 QKYYPLVDYQ-------------FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
++ Q A + + + F + + + + ++
Sbjct: 62 RQTDLTEAQQQERQKQYVKGLTLMDAQIISNLSCISANACFKVLKGNLQIENQAFTPEIL 121
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
+ + + + I+G D+A+ LG NI +
Sbjct: 122 AVSPSFFELKGLDINRGRLLCPLDQQQKQHVCILGYDVAKELGKKGHVSQNISIDHISFK 181
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMV--YMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
+G+ V + + + ++A++ I VK
Sbjct: 182 IVGILDHKHWIPGKTNVMTSRNLNRIIYVPLGIDKTLPRKTWLHDDALTEIAFQVKSNQD 241
Query: 237 IEKTHENIVRILGN 250
I +T + I IL +
Sbjct: 242 INQTAKTIHHILNH 255
>gi|126698060|ref|YP_001086957.1| ABC transporter permease [Clostridium difficile 630]
gi|115249497|emb|CAJ67312.1| ABC-type transport system, permease [Clostridium difficile]
Length = 822
Score = 47.1 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 29/248 (11%), Positives = 61/248 (24%), Gaps = 8/248 (3%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FE +AW L N+ I+I S I + V +S + +
Sbjct: 431 IKNFERHLAWLNLKRNKGRTIITILSLFMSI-------TVFVALSEFSNVLDVSRSVSNL 483
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
G + + + + + +
Sbjct: 484 KEGDFSLTNEISGFDKSTLDKIAKMKNVNRTSFIKYSEYKQGEIDTDINFENSGEMLKII 543
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + + K+ + + L P +T
Sbjct: 544 GIDEQTLKDLMPSITDSILEDFKNGSICFIKNPIAISTPGVKTRHTNLKPKDSITINKKQ 603
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ S F + V + N +N + I ++ KD +E+ +
Sbjct: 604 LDIYSTVDKMFFLQGNGWINGVDVIVYDSVYNTLTN-KNKFNQINIYAKDKSKLEQIRLS 662
Query: 244 IVRILGNG 251
I +I N
Sbjct: 663 IEQICENN 670
>gi|315185773|gb|EFU19539.1| protein of unknown function DUF214 [Spirochaeta thermophila DSM
6578]
Length = 398
Score = 47.1 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 27/240 (11%), Positives = 65/240 (27%), Gaps = 6/240 (2%)
Query: 15 YLFSNRKNAFISIA-----SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+ + N + AF+S+ +F+S +G++IGV ++I++ S+ + +++ HV+
Sbjct: 3 FFWENIRLAFLSMMHNKGRTFLSMLGIIIGVASVIMITSLGKSATASVEEQIARAGLHVI 62
Query: 70 IQQKY-YPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ L +
Sbjct: 63 SIFPRLSEKEAVRLAVPDLVDDLSSEFPTIEQGVALQRGQFLVTYGHSSTSATVMGVPAS 122
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ FS + + G R +
Sbjct: 123 FASMFSYEAEEGRFFSKEEDDARKQVVVLGSEVAEALFPYTDPIGKYIRIFRGQAKRFRV 182
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
V+ + +++ Q + VS + VK+ + + + + I L
Sbjct: 183 IGVMKSRSDTVGVSFDTSIFVPYQTYTTRLERTDNVSSYLLLVKEGEDVVELADRIENRL 242
>gi|261820324|ref|YP_003258430.1| ABC transporter [Pectobacterium wasabiae WPP163]
gi|261604337|gb|ACX86823.1| ABC transporter related protein [Pectobacterium wasabiae WPP163]
Length = 649
Score = 47.1 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 28/251 (11%), Positives = 78/251 (31%), Gaps = 8/251 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + + R F ++ +G++IG+ +++ V+++ G +E ++ + +
Sbjct: 258 AFKMALLAMNAQRMRTF------LTMLGIIIGIASVVSVVALGKGSQEQVLADINSMGTS 311
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D A + D+ + + +++ + ++ S
Sbjct: 312 TLEIFPGKDFGDMDASAIQTLRASDIQPLTQQPYVHSITPSIATSVTMRYGNIAVSASVS 371
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ F G + + + + + +
Sbjct: 372 GVGEQFFTVRGYTLDRGVLFPRSSVDQLAQDAVIDKNTRDKLFPHGEDPIGQVILLGSLP 431
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ V+ + F +N V++ ++ + I V VKD + +NI
Sbjct: 432 VRIIGVVSRNQGGFGSDENLNVWVPYTTVMKRMVGQSYLRSITVRVKDNIDMNIAEQNIT 491
Query: 246 RILGNGVVVID 256
+L D
Sbjct: 492 TLLTQRHGTKD 502
>gi|257454412|ref|ZP_05619674.1| macrolide export ATP-binding/permease protein MacB [Enhydrobacter
aerosaccus SK60]
gi|257448178|gb|EEV23159.1| macrolide export ATP-binding/permease protein MacB [Enhydrobacter
aerosaccus SK60]
Length = 660
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 28/239 (11%), Positives = 73/239 (30%), Gaps = 5/239 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIK--RVLGINGHVVIQQKYYPLVDYQFIANR 86
+ ++ +G++IG+ +++ V+ + G ++ ++ LG N V + ++ N
Sbjct: 279 TLLTMLGIIIGIASVVSVVGLGQGSQQKILNDISSLGTNTLTVRDGYKFGDPRRKYHDNN 338
Query: 87 LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDR 146
L S+ + ++ + S + + G
Sbjct: 339 LTDADANAVAEQPYVQSVSPQVSSNTATARYRETEASVNVSGVGKDYLTVKGEKLALGQT 398
Query: 147 GKGVIIGKD---LARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYD 203
I + + N+ P G+V +G + + P D
Sbjct: 399 FNDNSITSMTQDVIIDNNAKTAFFANVSDPIGEVMLVGSVPARVIGVLQPSEQAFGPSSD 458
Query: 204 NGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQ 262
+YM + V V +K+ + + + ++ D++ +
Sbjct: 459 TPTLYMPYTTVMHRMVGTSHVDSFIVLLKNTISSSAAEQAVSDLIEQRHGTDDFRIQNS 517
>gi|152981558|ref|YP_001355169.1| ATP-binding/permease fusion ABC transporter [Janthinobacterium sp.
Marseille]
gi|151281635|gb|ABR90045.1| ATP-binding/permease fusion ABC transporter [Janthinobacterium sp.
Marseille]
Length = 595
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 28/238 (11%), Positives = 77/238 (32%), Gaps = 7/238 (2%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AWR + NR + ++ +G++IGV ++IV+++V G ++ +I + + ++
Sbjct: 211 AWRGMRMNRTR------TGLTLLGIVIGVASVIVMLAVGEGAKQRVIDEMGSLGTTIMYL 264
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
+P ++ + V + + + G + R + +Y+
Sbjct: 265 GSGHPSNGGPPGRLTIEDLDAVAALPQIGHVMPIIGDPVTVRYGNVDRQVYAFASAYVMP 324
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTV 191
R+ F + + + + P G + +
Sbjct: 325 LVHRWRVGKGRFFTPAEDRDLAPVVVIGHKAWKNFFPDGSDPIGKQILIVDAPFEVIGVM 384
Query: 192 LGMFRMRFPDYDNGMVYMSLQEAQ-LYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ MV++ + ++ V D +++ + ++L
Sbjct: 385 AERGADSGSQDYDEMVFIPYNSGRMRVYDARAEPDYTVVEAASEDQVQEAEAAMKKLL 442
>gi|239993568|ref|ZP_04714092.1| ABC transporter related protein [Alteromonas macleodii ATCC 27126]
Length = 656
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 23/247 (9%), Positives = 74/247 (29%), Gaps = 4/247 (1%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F + A F+ + + + ++ +G++IGV A++ +M++ G ++ +++R+
Sbjct: 259 FPSISLFSALSMAFTALRMNW--FRTLLTLLGIIIGVAAVVTMMAIGEGGKQQVLERIET 316
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
I +++ + + L + S
Sbjct: 317 IGTNLISIRPGGRNMRSSGDIASLTLADATALKSVPGVAYVAPERSARATIRYSENDFSG 376
Query: 124 SDFSYLQNSFS--RFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ F + F + ++ + G+ M
Sbjct: 377 RITGTTPDYFHAKDWEMAQGVFFSDEDVTNYAPVVVIGDTVAETLFEDKYRAVGEYILMQ 436
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ + + V + + +L + +S I + + + +
Sbjct: 437 NAFYQVVGVLHSKGASAGGNDMDDEVLIPVTTGRLKVFGRDYLSSITIKAESTEVATQVK 496
Query: 242 ENIVRIL 248
++++ +L
Sbjct: 497 DDVLALL 503
>gi|238786835|ref|ZP_04630636.1| Macrolide export ATP-binding/permease protein macB [Yersinia
frederiksenii ATCC 33641]
gi|238725203|gb|EEQ16842.1| Macrolide export ATP-binding/permease protein macB [Yersinia
frederiksenii ATCC 33641]
Length = 643
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 29/267 (10%), Positives = 80/267 (29%), Gaps = 15/267 (5%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +R AF +S +G++IG+ +++ M+V G R++++ + +
Sbjct: 254 AIKMAWRSLLGHRIRAF------LSMLGIIIGISSVVSSMAVGEGARQEILNEISQLGTS 307
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + + R DV + + ++ + V S
Sbjct: 308 NLDVRPGLGWDKPRPDFERALSPSDVELLRHQPYVDSLSPVVNKVVAAVRGDKQVMVSLS 367
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ + F + G D + + + + +
Sbjct: 368 GVSDGFFQVKGLNFMAGDGFTQSHVNAREPVVILQPELSDTLFAAGENPIGEIVQLDGIP 427
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ R +M + + + I V V++ ++ +++ ++
Sbjct: 428 LRVMGVAKRGNSSFGGLLTAWMPYTSLTERISGDIPLESISVRVREGYSLNDVQQDVEKL 487
Query: 248 LGN-----GVVVIDWQQRYQIFFSCYE 269
L ++ +
Sbjct: 488 LEQAHGQRDFFILS----NDQMSKAIQ 510
>gi|89894072|ref|YP_517559.1| hypothetical protein DSY1326 [Desulfitobacterium hafniense Y51]
gi|89333520|dbj|BAE83115.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 791
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 28/243 (11%), Positives = 62/243 (25%), Gaps = 21/243 (8%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
F + +R LF ++ S ++ +GV+ + L++ ++ FR M
Sbjct: 416 NFSWKIIFRNLFRYKRR------SALASVGVIFSMALLLIALA----FRSSMGN------ 459
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
++ +Y + + N + L G D
Sbjct: 460 ---LMAMQYEEIQKFDLKINFTQMLAVDELSTIRNLAHVKSVEPVLETGMELTYGWKKKD 516
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
L V + + + L + G
Sbjct: 517 IGVLALDREAQLYGVYDRKGKAAILPSDGVLLPARLMETLGLHTGDRVTLRSYYPGKNTD 576
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
TV+ + + M + + V+G + + D ++ +
Sbjct: 577 RDKKTVVVKGETSQFIGQSAVCSMDYIDY--LLDEGRVVNGAHIKLDDGQYEKEVTAKLE 634
Query: 246 RIL 248
IL
Sbjct: 635 DIL 637
>gi|307717923|ref|YP_003873455.1| permease, involved in lipoprotein release [Spirochaeta thermophila
DSM 6192]
gi|306531648|gb|ADN01182.1| putative permease, involved in lipoprotein release [Spirochaeta
thermophila DSM 6192]
Length = 421
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 37/277 (13%), Positives = 88/277 (31%), Gaps = 30/277 (10%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ ++ ++ + L + + I+ V +G++ I V S++ G D + +L
Sbjct: 1 MKAKTLFSLSLKNLTRYTRR------TIITASAVAVGILLFIFVDSILKGAERDSERNLL 54
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLP----------------FVSGQAFV 106
+ + V +
Sbjct: 55 WYETGSAQVFTGEFWEEKDRLPLNKGIEEPDEVVSFLASKGVKAAPRITALGELVVYKDP 114
Query: 107 SGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGD 166
+ D + G+ + +GVI+G+ LA +LG +G
Sbjct: 115 YPEDGSLQVRITAVDPVRDPEVFRLEDEVVEGSWFSGSPGEEGVILGQWLAEDLGARVGY 174
Query: 167 KINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSG 226
+ +++ D ++ T++G+ P + VY+ L A Y ++ V+
Sbjct: 175 PVTLVTRTRDG-----AYQTMDLTIVGIVATPNPVVNRTGVYLPLDTADFYLDMGGTVTS 229
Query: 227 IEVFVKDPDAIEKTHENIVRIL---GNGVVVIDWQQR 260
I + + + +E+ + L G+ + W+
Sbjct: 230 IALSLPEHIPVEEQVAALGPELAARFPGLTLKTWKDL 266
>gi|325474496|gb|EGC77683.1| lipoprotein releasing system [Treponema denticola F0402]
Length = 386
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 33/228 (14%), Positives = 73/228 (32%), Gaps = 8/228 (3%)
Query: 41 MALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFV 100
M L V++S+MNG + I +L ++ + L + + + F
Sbjct: 1 MVLTVILSIMNGLQMGYIDTILQVSSGHIR------LYGEKEDLKEAENLKLHKAFFVFQ 54
Query: 101 SGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNL 160
Q + G GVL+R + + S + K +I
Sbjct: 55 ESQTLMQGNYGKQHGVLIRSVEEDIMQKDKGLASALKITSGSFNILEKDSVILGYELARQ 114
Query: 161 GISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL 220
+ + + ++ V G+F+ + + D+ +MSL+ + F
Sbjct: 115 LGVKVGDNVNIIAVSGSSETSLFPENQDLIVTGIFKTGYYEVDSSFAFMSLENGENLFGK 174
Query: 221 ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
E+ + V +++ + ++ + W+ FF
Sbjct: 175 ESKLYA-SVKLQNQNNDAAYISSLNAS-SLNLKAESWRTYNHAFFGAL 220
>gi|325275402|ref|ZP_08141345.1| hypothetical protein G1E_18830 [Pseudomonas sp. TJI-51]
gi|324099464|gb|EGB97367.1| hypothetical protein G1E_18830 [Pseudomonas sp. TJI-51]
Length = 655
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AWR +++NR + ++ +G++IGV +++V+++V G + ++ ++ +++
Sbjct: 271 AWRMMWTNRTR------TALTLLGIIIGVASVVVMLAVGEGSKRQVMAQIGAFGSNIMFM 324
Query: 72 Q 72
Sbjct: 325 N 325
>gi|197123458|ref|YP_002135409.1| hypothetical protein AnaeK_3058 [Anaeromyxobacter sp. K]
gi|196173307|gb|ACG74280.1| protein of unknown function DUF214 [Anaeromyxobacter sp. K]
Length = 409
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ + VA R L ++ +F ++ +G++IGV A+I ++++ +G R + K
Sbjct: 1 MNLLQT--LRVALRALRRSKMRSF------LTALGIVIGVAAVIAMVALGDGARAQVAKT 52
Query: 61 VLGINGHVVI 70
+ ++++
Sbjct: 53 FESMGSNLLM 62
>gi|220918263|ref|YP_002493567.1| protein of unknown function DUF214 [Anaeromyxobacter dehalogenans
2CP-1]
gi|219956117|gb|ACL66501.1| protein of unknown function DUF214 [Anaeromyxobacter dehalogenans
2CP-1]
Length = 409
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ + VA R L ++ +F ++ +G++IGV A+I ++++ +G R + K
Sbjct: 1 MNLLQT--LRVALRALRRSKMRSF------LTALGIVIGVAAVIAMVALGDGARAQVAKT 52
Query: 61 VLGINGHVVI 70
+ ++++
Sbjct: 53 FESMGSNLLM 62
>gi|86159392|ref|YP_466177.1| hypothetical protein Adeh_2970 [Anaeromyxobacter dehalogenans
2CP-C]
gi|85775903|gb|ABC82740.1| protein of unknown function DUF214 [Anaeromyxobacter dehalogenans
2CP-C]
Length = 409
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ + VA R L ++ +F ++ +G++IGV A+I ++++ +G R + K
Sbjct: 1 MNLLQT--LRVALRALRRSKMRSF------LTALGIVIGVAAVIAMVALGDGARAQVAKT 52
Query: 61 VLGINGHVVI 70
+ ++++
Sbjct: 53 FESMGSNLLM 62
>gi|170288383|ref|YP_001738621.1| hypothetical protein TRQ2_0584 [Thermotoga sp. RQ2]
gi|170175886|gb|ACB08938.1| protein of unknown function DUF214 [Thermotoga sp. RQ2]
Length = 404
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 13 WRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
R L +N+ F +S +G++IGV A+I+VMS+ G +E + +R+ + ++++
Sbjct: 8 LRSLLANKMRTF------LSMLGIVIGVTAVIMVMSLGAGMKESVTERLTSLGSNIIM 59
>gi|219668483|ref|YP_002458918.1| hypothetical protein Dhaf_2454 [Desulfitobacterium hafniense DCB-2]
gi|219538743|gb|ACL20482.1| protein of unknown function DUF214 [Desulfitobacterium hafniense
DCB-2]
Length = 792
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 28/243 (11%), Positives = 62/243 (25%), Gaps = 21/243 (8%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
F + +R LF ++ S ++ +GV+ + L++ ++ FR M
Sbjct: 417 NFSWKIIFRNLFRYKRR------SALASVGVIFSMALLLIALA----FRSSMGN------ 460
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
++ +Y + + N + L G D
Sbjct: 461 ---LMAMQYEEIQKFDLKINFTQMLAVDELSTIRNLAHVKSVEPVLETGMELTYGWKKKD 517
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
L V + + + L + G
Sbjct: 518 IGVLALDREAQLYGVYDRKGKAAILPSDGVLLPARLMETLGLQTGDRVTLRSYYPGKNTD 577
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
TV+ + + M + + V+G + + D ++ +
Sbjct: 578 RDKKTVVVKGETSQFIGQSAVCSMDYIDY--LLDEGAVVNGAHIKLDDGQYEKEVTAKLE 635
Query: 246 RIL 248
IL
Sbjct: 636 DIL 638
>gi|251782212|ref|YP_002996514.1| ABC transporter permease [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242390841|dbj|BAH81300.1| ABC transporter permease protein [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|323127065|gb|ADX24362.1| permease [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394]
Length = 406
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 33/261 (12%), Positives = 73/261 (27%), Gaps = 20/261 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A ++ ++ S ++ +G++IGV A++++M + N ++ + +
Sbjct: 4 WKFALSSIWGHKMR------SILTMLGIIIGVSAVVIIMGLGNAMKKSVTDTFSNNQKEI 57
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVL-------------PFVSGQAFVSGLSSGGSG 115
+ K + + A +K + S +S
Sbjct: 58 QLYYKEKGEDEDPYAAFYSHENDQEVKAEWLEQIVRDIDGVDAYYFTNNTSSTISYEKKK 117
Query: 116 VLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYG 175
+ I+ Y + + + L L + K N
Sbjct: 118 MENAAITGVSQDYFKVKDYDIVAGRTLKAADYRNFSRIILLDTVLSDELFGKGNYKDALN 177
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD 235
V +G G M+ + FN++ + I V V+D
Sbjct: 178 KVVSLGNKDYLVIGVYKTPQSSVSMGGLVGGAVMANTQVASEFNVK-EIGSIYVHVRDIR 236
Query: 236 AIEKTHENIVRILGNGVVVID 256
+ ++L V D
Sbjct: 237 RSLTLGQEAAQMLTQLSHVKD 257
>gi|157736960|ref|YP_001489643.1| ABC transporter, permease protein [Arcobacter butzleri RM4018]
gi|157698814|gb|ABV66974.1| ABC transporter, permease protein [Arcobacter butzleri RM4018]
Length = 403
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 29/272 (10%), Positives = 87/272 (31%), Gaps = 22/272 (8%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ S ++A + + N + S ++ +G++IGV ++I ++ + +G + + +
Sbjct: 1 MLSN-AFLIAIKEIRRN------ILRSILTILGIVIGVASVIAMVMIGDGTTASVKESIT 53
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ +++ + N + + Q + + + + + +
Sbjct: 54 KLGTNMLTLRVGQERRGPPREDNSSKAFQNEDIIAIKNEIQNIKAVAAENSTKMNIVYGN 113
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S+ S + + + ++ G+ + + IG I +
Sbjct: 114 KSNNSSVIGTNNDYFIIKDWALKDGRIFDDSELSSGKSSCIIGTTIVTQLFGDENPIGAS 173
Query: 183 GIRSKSYTVLGMF-----RMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
+ F + + +V + L+ Q + VS I + + + I
Sbjct: 174 IRLKNMTCNVIGVLASKGAAAFGNDQDEIVIVPLKMYQRKIKGDKDVSSIIISITEERYI 233
Query: 238 EKTHENIVRIL----------GNGVVVIDWQQ 259
E I ++ + + D +
Sbjct: 234 ENAKTEITSLMQERRAVKIGEPDNFHIRDMKD 265
>gi|134046165|ref|YP_001097650.1| hypothetical protein MmarC5_1135 [Methanococcus maripaludis C5]
gi|132663790|gb|ABO35436.1| protein of unknown function DUF214 [Methanococcus maripaludis C5]
Length = 397
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 34/251 (13%), Positives = 78/251 (31%), Gaps = 11/251 (4%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M I A + + + S ++ IG++IG++A++ ++S+ G + +
Sbjct: 1 MKIKDIISF--AGQNIIQKKTQ------STLTIIGIVIGILAIVSLISLGYGVQNYIKSE 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ +V+ N D + I+ + + S
Sbjct: 53 ITTAGANVISILPSKDFGGPAAGKNFNDRDVNAIENIREIDEVLPAWFGSYLLEYSD--Q 110
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ S + + ++ KG I + + I + D+
Sbjct: 111 KYYGSVLAINPSKYQRIYAQTWGYELYKGRWIENNDKYSCMIGYTLATDSFDREIDIGDK 170
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
K + + P D+ +V S F +++ + I V VK + +
Sbjct: 171 ITINDKKYKVIGILEETGNPRDDDAVVL-SYDMGSELFEIDDEYNVITVVVKSGENVVSI 229
Query: 241 HENIVRILGNG 251
+ I L +
Sbjct: 230 ADEIEEELEDS 240
>gi|148269706|ref|YP_001244166.1| hypothetical protein Tpet_0569 [Thermotoga petrophila RKU-1]
gi|281412410|ref|YP_003346489.1| protein of unknown function DUF214 [Thermotoga naphthophila
RKU-10]
gi|147735250|gb|ABQ46590.1| protein of unknown function DUF214 [Thermotoga petrophila RKU-1]
gi|281373513|gb|ADA67075.1| protein of unknown function DUF214 [Thermotoga naphthophila
RKU-10]
Length = 404
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 13 WRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
R L +N+ F +S +G++IGV A+I+VMS+ G +E + +R+ + ++++
Sbjct: 8 LRSLLANKMRTF------LSMLGIVIGVTAVIMVMSLGAGMKESVTERLTSLGSNIIM 59
>gi|183598320|ref|ZP_02959813.1| hypothetical protein PROSTU_01710 [Providencia stuartii ATCC 25827]
gi|188020494|gb|EDU58534.1| hypothetical protein PROSTU_01710 [Providencia stuartii ATCC 25827]
Length = 647
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 29/251 (11%), Positives = 85/251 (33%), Gaps = 12/251 (4%)
Query: 3 IFSRFE--VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
I+ RF +++AWR + N+ + ++ +G++IG+ +++ +M + + + ++
Sbjct: 249 IYGRFSEALLMAWRAMVVNKMR------TLLTMLGIIIGIASVVSIMVIGDAAQSMVLND 302
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ I + + + DV + QA LS
Sbjct: 303 IKSIGTNTISVYPGEDFGSDDAENRQSLKPSDVDAIAKQPYVQAVSGELSKSTRLRKGNL 362
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+++ + + + Y ++ ++ + + + + + V
Sbjct: 363 DASAQLLGVGRDYFQVYAEKFSEGMNFTADMVERRAQVVVIDANTKRRFFPNQKQVVGET 422
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQE---AQLYFNLENAVSGIEVFVKDPDAI 237
+ + + + + + + + L + N + I V VK+
Sbjct: 423 ILIGNMPATVIGVLAEQKSIFGSSNSLSVWLPDTTVNSKILNRP-YLDSIVVRVKEGVDA 481
Query: 238 EKTHENIVRIL 248
+ + I R+L
Sbjct: 482 KTAEQQITRLL 492
>gi|227328252|ref|ZP_03832276.1| macrolide-specific ABC-type efflux carrier [Pectobacterium
carotovorum subsp. carotovorum WPP14]
Length = 650
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 28/251 (11%), Positives = 77/251 (30%), Gaps = 8/251 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + + R F ++ +G++IG+ +++ V+++ G +E ++ + +
Sbjct: 259 AFKMALLAMNAQRMRTF------LTMLGIIIGIASVVSVVALGKGSQEQVLADINSMGTS 312
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D A + D+ + + +S+ + ++ S
Sbjct: 313 TLEIFPGKDFGDMDASAIQTLRASDIQPLTQQPYVHSVTPSISTSVTMRYGNIAVSASIS 372
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ F G + + + + +
Sbjct: 373 GVGEQFFTVRGYTLQRGMLFPRSSVDELKQDAVIDKNTRDKLFPHGEDPIGQVILLGSLP 432
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ V+ + F +N V++ ++ + I V VKD + ++I
Sbjct: 433 VRIIGVVSKNQGGFGSDENLNVWVPYTTVMKRMVGQSYLKSITVRVKDNVDMNVAEKSIT 492
Query: 246 RILGNGVVVID 256
+L D
Sbjct: 493 ALLTQRHGTKD 503
>gi|127513588|ref|YP_001094785.1| hypothetical protein Shew_2660 [Shewanella loihica PV-4]
gi|126638883|gb|ABO24526.1| protein of unknown function DUF214 [Shewanella loihica PV-4]
Length = 410
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 33/254 (12%), Positives = 70/254 (27%), Gaps = 8/254 (3%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +AWR L+ ++ ++ + + + + S+ G E I + +
Sbjct: 3 IKLAWRNLWRQKRRTLLTAFALALAL------FLSLFMRSMQEGSYEHNIDNSARFSTGL 56
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ Q + + + S
Sbjct: 57 IQLQSPEYATTESIEDLLPGDDDFIAPAKALPHISYALPRIESFLLASSEERSKGVLVYG 116
Query: 129 LQNSFSRFYGNVSNDFDRGKGVII--GKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
++ Y + + G+ + + L +
Sbjct: 117 VRPQLESDYSGIDDKLVAGRYLTPGAQQVLLGQGLAEYLKLGVGDELVLYGQGYHGQTAA 176
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
Y + G+ DN +VYM L AQ F+ V+ + + D + E +
Sbjct: 177 GVYPIAGILHFPLAQLDNQLVYMPLSAAQGLFSTGEQVTSWVLHSDNLDEVAPLTERLSN 236
Query: 247 ILGNGVVVIDWQQR 260
+ G+ V V DWQ
Sbjct: 237 LYGDRVKVRDWQSL 250
>gi|297623793|ref|YP_003705227.1| hypothetical protein Trad_1565 [Truepera radiovictrix DSM 17093]
gi|297164973|gb|ADI14684.1| protein of unknown function DUF214 [Truepera radiovictrix DSM
17093]
Length = 864
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 35/250 (14%), Positives = 70/250 (28%), Gaps = 11/250 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK-RVLGINGH 67
+A R LF R + + +GV +G+ A++ +S+ + ++
Sbjct: 5 FRLALRNLFRYRSR------TLATTLGVALGIAAVLATLSIGDNVEANVRGALQAAAGRA 58
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVL--PFVSGQAFVSGLSSGGSGVLVRGISNSD 125
++ +A L + V V V +S
Sbjct: 59 SLLVTPGAEGRAVFPVAEVLPSVQATPGVSRAYPVLNVRAEPVRDIQVQADSVLPGVDSG 118
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
F + + +A G + I + P + +G
Sbjct: 119 FQLSGRRTDAPEDLPAELAEGRLPEAGSMGVALAEGFARSRNIAVGDPITFASQVGELTF 178
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ + + + +L + Q L S IEV + +P A + E +
Sbjct: 179 TVTGLLDDSLG-YPTTNGGRVGIAALADLQEALRLPGRASFIEV-ITEPGASTQVQEALR 236
Query: 246 RILGNGVVVI 255
LG V
Sbjct: 237 ARLGEAYAVT 246
>gi|319782961|ref|YP_004142437.1| hypothetical protein Mesci_3264 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317168849|gb|ADV12387.1| protein of unknown function DUF214 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 405
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 32/252 (12%), Positives = 75/252 (29%), Gaps = 13/252 (5%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV--LGINGHV 68
++ R + N +F+++ +G++IGV A+I ++++ +G + + + LG N V
Sbjct: 8 LSLRSIRRNVLRSFLTL------LGIVIGVAAVIAMLTIGSGTTQKVKADISKLGSNLLV 61
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
V + + + + + + + V V + S S
Sbjct: 62 VRSGRPAGPGGPGGLDQVVRPLAEKELAALVAHLTGARAISPASQKQVRVIFGTESLTSG 121
Query: 129 LQNSFSRFYGNVSND-----FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + S + G + P G++ +
Sbjct: 122 VTGTDSAYLDARDWKLVSGRPFSDSETRSGTGVCLIGETVRQQFFGAGDPEGEIIRVNRT 181
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ F + +V M L Q + I + D +
Sbjct: 182 SCKIIGLLEPKGYTGFGQDQDNVVLMPLHAYQRRIAGNRDIDNIYIAADDRTPTSELQPR 241
Query: 244 IVRILGNGVVVI 255
+ IL + +
Sbjct: 242 VEDILRDARRIT 253
>gi|212709687|ref|ZP_03317815.1| hypothetical protein PROVALCAL_00735 [Providencia alcalifaciens DSM
30120]
gi|212687498|gb|EEB47026.1| hypothetical protein PROVALCAL_00735 [Providencia alcalifaciens DSM
30120]
Length = 647
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 29/248 (11%), Positives = 86/248 (34%), Gaps = 10/248 (4%)
Query: 5 SRFE--VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
SRF +++AWR + N+ + ++ +G++IG+ +++ +M + + + ++ +
Sbjct: 251 SRFSEALLMAWRAMVVNKMR------TLLTMLGIVIGIASVVSIMVIGDAAKGMVLNDIK 304
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
I + + ++ D+ + Q+ + + +
Sbjct: 305 SIGTNTISVYPGKDFGSDDPENRQVLKASDISAIAQQPYVQSVTGSIETSARLRKGNLDA 364
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGK--DLARNLGISIGDKINILSPYGDVTPM 180
+ S + + + YG+ ++ ++ + + + T +
Sbjct: 365 VARVSGVGTDYFQVYGSHFSEGMGFTQDMLTRRAPVVVIDRNTKRRFFPNKQNVVGETLL 424
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ + VLG + F + V++ + I V V + +
Sbjct: 425 IGNMPATIIGVLGEQKSIFGSSKSLEVFLPDTTINSKLINRSYYDSIVVRVNEGVDAKVA 484
Query: 241 HENIVRIL 248
+ +VR+L
Sbjct: 485 EQQLVRLL 492
>gi|21227735|ref|NP_633657.1| ABC transporter, ATP-binding protein [Methanosarcina mazei Go1]
gi|20906134|gb|AAM31329.1| ABC transporter, ATP-binding protein [Methanosarcina mazei Go1]
Length = 403
Score = 46.7 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 39/227 (17%), Positives = 75/227 (33%), Gaps = 2/227 (0%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IGV A+I +S+ F + V I + + Q P + Y ++
Sbjct: 22 STLTVLGIVIGVAAVIANVSLGASFNQHFTNEVTNIGSNFIYVQGMQPKLFYDNQLQIIE 81
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
P ++ V P + Q S ++V G+ + S ND
Sbjct: 82 NTPGILGVSP-LKSQTAEVTYMSETKNIMVSGVGEDYDEVAKTQLSEGSFINDNDRYVAI 140
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ +S+ I+I G+ + + K M DN V
Sbjct: 141 IGYDIANEKFGRNLSVRSSIDITFRIGENDKVTQTFKVKGIIQNPQNTMVQGFNDNEAVL 200
Query: 209 MSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVI 255
+ + + +DP I+ T + + R L +
Sbjct: 201 IPIAVMNEMLGETDYGGAFA-MAEDPATIQNTSDEVDRRLARSFGIS 246
>gi|46143385|ref|ZP_00135343.2| COG0577: ABC-type antimicrobial peptide transport system, permease
component [Actinobacillus pleuropneumoniae serovar 1
str. 4074]
gi|126208108|ref|YP_001053333.1| putative macrolide-specific ABC-type efflux carrier [Actinobacillus
pleuropneumoniae L20]
gi|303253719|ref|ZP_07339856.1| putative macrolide-specific ABC-type efflux carrier [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307245486|ref|ZP_07527573.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307247600|ref|ZP_07529643.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|307249829|ref|ZP_07531805.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|307254440|ref|ZP_07536277.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307258899|ref|ZP_07540630.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|126096900|gb|ABN73728.1| putative macrolide-specific ABC-type efflux carrier [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|302647444|gb|EFL77663.1| putative macrolide-specific ABC-type efflux carrier [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|306853545|gb|EFM85763.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306855870|gb|EFM88030.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306858131|gb|EFM90211.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306862581|gb|EFM94538.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306866923|gb|EFM98780.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
Length = 640
Score = 46.7 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 22/241 (9%), Positives = 77/241 (31%), Gaps = 7/241 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + +++ + ++ +G++IG+ ++I V+++ G ++ ++ + + +
Sbjct: 252 SFKMAINAITAHKLR------ALLTMLGIVIGITSVISVVALGQGSQQQILSNINSLGTN 305
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + + I D + + + + G+ + + +
Sbjct: 306 TMTIMNGTGFGDRRANLTKNLTISDAMMLNKQQFVDSTTPSSNLNGTVIYGNTNVTASIN 365
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ F G + + K ++ + + +
Sbjct: 366 GVGEQFVNVKGLKMISGRFFDADEVKLSSQVVVIDGNTKK-DLGLTDPVEGKVILVDKKP 424
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ + + ++M + E + + V VKD + ++I +
Sbjct: 425 LTVIGMAQESNNLNQTSLKMWMPYTTLMQRISGEKFIDSLTVKVKDNVESQTAEKSINEL 484
Query: 248 L 248
L
Sbjct: 485 L 485
>gi|218132450|ref|ZP_03461254.1| hypothetical protein BACPEC_00309 [Bacteroides pectinophilus ATCC
43243]
gi|217992560|gb|EEC58562.1| hypothetical protein BACPEC_00309 [Bacteroides pectinophilus ATCC
43243]
Length = 395
Score = 46.7 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 31/253 (12%), Positives = 84/253 (33%), Gaps = 11/253 (4%)
Query: 15 YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKY 74
+ N+ +F ++ +G++IGV A+I +++++ G ++++ + + ++
Sbjct: 14 NIKGNKMRSF------LTTLGIIIGVTAVIALITIVQGVSDNVMGQFENLGAGKLVVSIT 67
Query: 75 YPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFS 134
+ + + I + V + S + G + + +L N+
Sbjct: 68 GTSLKTGLSDSDIAKIEAIDNVAGVSPTVSTTSKGARNGEVDDINVEGKNGTYFLNNNNI 127
Query: 135 RFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGM 194
+++ G D + + + + M
Sbjct: 128 ISGRALTHAEMAGDVYTCVID-KDCAKRFFFGENPVGKKLKVGGYTYTVVGLEGDDANLM 186
Query: 195 FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVV 254
M D G V + + A N ++ IE+++ D ++ ++ ++L
Sbjct: 187 STMMTTSSDGGTVKIPYKNALKMTGSAN-INSIEIYIGDTQFSDQVTNDLKKVLNQAFND 245
Query: 255 IDWQQRYQIFFSC 267
D Y F+
Sbjct: 246 KD--DSY-SIFNM 255
>gi|85716760|ref|ZP_01047728.1| ABC transporter, ATPase subunit [Nitrobacter sp. Nb-311A]
gi|85696478|gb|EAQ34368.1| ABC transporter, ATPase subunit [Nitrobacter sp. Nb-311A]
Length = 1014
Score = 46.7 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 32/237 (13%), Positives = 77/237 (32%), Gaps = 14/237 (5%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
+ ++ G++IGV +++ +M++ G + +++ I + V+ + A L
Sbjct: 277 TALTLSGIVIGVASVVAMMAIGRGAQVSYMEQASAIGTNWVV-----VGRVGESAATSLP 331
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVS----NDF 144
P + + + + + +S S + R N + F
Sbjct: 332 LTPADAEAIKDLDNVSGSMPAMWEMATFQRGNVSLSAEVIGTTAEFRTVHNWNAAKGAFF 391
Query: 145 DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDN 204
R + + +++ I P G + + + N
Sbjct: 392 TREDELSGSAVMLLGSTVALKLFPGIADPSGRSALVNNVPFLVTGVLEDKGLSARGTDRN 451
Query: 205 GMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL-----GNGVVVID 256
+ M L+ A ++ +S I V + D + +T + I +L + D
Sbjct: 452 NNMVMPLRTAATRLFGKDDLSEIVVSIADMSRLRETKDAIKTLLIRRHGREDFYIHD 508
>gi|222082465|ref|YP_002541830.1| ABC transporter [Agrobacterium radiobacter K84]
gi|221727144|gb|ACM30233.1| ABC transporter [Agrobacterium radiobacter K84]
Length = 615
Score = 46.7 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 29/252 (11%), Positives = 83/252 (32%), Gaps = 9/252 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++A L ++R F ++ +G++IG+ +++ V+++ G + ++ + + +
Sbjct: 223 AFLMAVLALKAHRLRTF------LTMLGIIIGIASVVCVIALGEGSQRKVLSNINNLGTN 276
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + + + D + A +S+ + +N+ +
Sbjct: 277 TLEIFPGKSFGDMRSGRIKTLMVSDADALAKLTYVAAVTPTVSTSSTVRFGSTEANALIN 336
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ +++ G+ + + + D + I
Sbjct: 337 GVGDAYFSVKGSKLVTGRLFDNDSVQRMAQDAVIDQNTATTLFEDKGLDPLGQTIFIAKV 396
Query: 188 SYTVLGMFRMRFPDYDNGM---VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
V+G+ + + + VY+ Q F + ++ I V V D +
Sbjct: 397 PVRVIGIIASQQGGFGSSDNLSVYLPYTSVQARFLGDMSLRSITVRVSDDTESATAEAAV 456
Query: 245 VRILGNGVVVID 256
+ L + D
Sbjct: 457 TQFLEHRHKARD 468
>gi|304314843|ref|YP_003849990.1| ABC-type transport system, permease protein [Methanothermobacter
marburgensis str. Marburg]
gi|302588302|gb|ADL58677.1| predicted ABC-type transport system, permease protein
[Methanothermobacter marburgensis str. Marburg]
Length = 370
Score = 46.7 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 28/252 (11%), Positives = 71/252 (28%), Gaps = 24/252 (9%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+ + F +R S ++ G+ IG+ ++ + + G + +
Sbjct: 6 LILKNPFRSRAR------SLLAITGIAIGIATIVTLGVITEGLKASTENTLKAGGADFT- 58
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
+ + + + G V +
Sbjct: 59 ----------------IVESNVSDMFFSKIDEEYVDKVRNVSGVEDAVGILMAVQPLDDN 102
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
F + + + G+ L + +G + I+++ Y
Sbjct: 103 PYFVLIGIDPAKINMSQIKITDGRTLTDPDADEVIIGKVASENHGKGVGDTIKIKNREYR 162
Query: 191 VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN 250
++G+F D G ++SL++ Q E V+ I V + +E + I + +
Sbjct: 163 IVGIFESGDMQQDGG-AFISLKKLQKIEEKEGKVTMIYVKMTRNSRVEDVTDRIEKRYND 221
Query: 251 GVVVIDWQQRYQ 262
+ +
Sbjct: 222 LTTIASLEDLQS 233
>gi|332181878|gb|AEE17566.1| protein of unknown function DUF214 [Treponema brennaborense DSM
12168]
Length = 396
Score = 46.7 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 29/79 (36%), Gaps = 8/79 (10%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F F A R NR S +S +GV+IGV ++IV+ S+ + +
Sbjct: 1 MFDDFLF--ALRNFKRNRIR------SILSLLGVIIGVASVIVITSLGRSASKSIKDSYS 52
Query: 63 GINGHVVIQQKYYPLVDYQ 81
+V +
Sbjct: 53 SAGLDLVKISAGFMRRGRD 71
>gi|225020447|ref|ZP_03709639.1| hypothetical protein CORMATOL_00454 [Corynebacterium matruchotii
ATCC 33806]
gi|305679877|ref|ZP_07402687.1| efflux ABC transporter, permease protein [Corynebacterium
matruchotii ATCC 14266]
gi|224946836|gb|EEG28045.1| hypothetical protein CORMATOL_00454 [Corynebacterium matruchotii
ATCC 33806]
gi|305660497|gb|EFM49994.1| efflux ABC transporter, permease protein [Corynebacterium
matruchotii ATCC 14266]
Length = 430
Score = 46.7 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
MSIF + +A L +N+ S ++ +GV+IG+ ++I ++++ +G RED +
Sbjct: 1 MSIFE--SLTLALSNLRTNKMR------SALTLLGVIIGIASVITILTIGDGLREDTLSS 52
Query: 61 VLGIN 65
+
Sbjct: 53 LNNDG 57
>gi|165976042|ref|YP_001651635.1| putative ABC transporter ATP-binding protein [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|165876143|gb|ABY69191.1| putative ABC transporter ATP-binding protein [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
Length = 640
Score = 46.7 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 22/241 (9%), Positives = 77/241 (31%), Gaps = 7/241 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + +++ + ++ +G++IG+ ++I V+++ G ++ ++ + + +
Sbjct: 252 SFKMAINAITAHKLR------ALLTMLGIVIGITSVISVVALGQGSQQQILSNINSLGTN 305
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + + I D + + + + G+ + + +
Sbjct: 306 TMTIMNGTGFGDRRANLTKNLTISDAMMLNKQQFVDSTTPSSNLNGTVIYGNTNVTASIN 365
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ F G + + K ++ + + +
Sbjct: 366 GVGEQFVNVKGLKMISGRFFDADEVKLSSQVVVIDGNTKK-DLGLTDPVEGKVILVDKKP 424
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ + + ++M + E + + V VKD + ++I +
Sbjct: 425 LTVIGMAQESNNLNQTSLKMWMPYTTLMQRISGEKFIDSLTVKVKDNVESQTAEKSINEL 484
Query: 248 L 248
L
Sbjct: 485 L 485
>gi|82701504|ref|YP_411070.1| hypothetical protein Nmul_A0370 [Nitrosospira multiformis ATCC
25196]
gi|82409569|gb|ABB73678.1| Protein of unknown function DUF214 [Nitrosospira multiformis ATCC
25196]
Length = 409
Score = 46.7 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 42/263 (15%), Positives = 88/263 (33%), Gaps = 23/263 (8%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMS----VMNGFREDMIKRV 61
R + ++A+R + +++ S I+ V G++ALI+ + G +E I+
Sbjct: 5 RLDFLLAFRNMVRHKRR------SAIAVGAVTFGIIALILAAGFIEWIFWGMQEATIQSQ 58
Query: 62 LGI------NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSG 115
LG + Y + I +
Sbjct: 59 LGHIQISRPGYQEAGKADPYAYLLPDAIPELEPANGPAQIKTIIPRLSFGGLISHGDATL 118
Query: 116 VLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYG 175
V + + + + D KG+I+G L RNL ++IGDK+ +L+
Sbjct: 119 SFVGEGVIPEEKAILSGSVEISAGENLSVDAPKGIILGVGLGRNLNVNIGDKVVLLASTA 178
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD 235
+ + + F YD+ + M ++ A+ ++ + V + D
Sbjct: 179 SRGVNAVEVTVRGL-----FSTVNKSYDDIALRMPIETARQLLRVKGS-HVWVVLLNDTA 232
Query: 236 AIEKTHENIVRIL-GNGVVVIDW 257
+ + + L + V+ W
Sbjct: 233 KTDTVLQRLRDSLQKSDFEVVPW 255
>gi|229521410|ref|ZP_04410829.1| macrolide export ATP-binding/permease protein macB [Vibrio cholerae
TM 11079-80]
gi|229341508|gb|EEO06511.1| macrolide export ATP-binding/permease protein macB [Vibrio cholerae
TM 11079-80]
Length = 652
Score = 46.7 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 27/242 (11%), Positives = 76/242 (31%), Gaps = 7/242 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + ++R F ++ +G++IG+ +++ V+++ NG ++ ++ + +
Sbjct: 262 AFKMALLAMSNHRLRTF------LTMLGIIIGIASVVSVVALGNGSQKSILDSISSMGTS 315
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + R D + + LS+ + +
Sbjct: 316 TIDVIPGTGFGDRRSGRVRTLTAADAHALSNLSFIDSVTPTLSTSVTIKYSNQAVTASVQ 375
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ + R G D + + + K + + G
Sbjct: 376 GVGPDYFRVRGYALADGQYWDQASVETLAQEAVIDNNTLKSLFPNQDPIGEVIFAGNLPV 435
Query: 188 SYTVLGMF-RMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ F + D+ +++ +N + I V V + + + I+
Sbjct: 436 RIIGVTKAKESAFGNSDSLNIWLPYTTVSARMMGQNYLDRISVRVNESTPSDAAEQAIIS 495
Query: 247 IL 248
+L
Sbjct: 496 LL 497
>gi|330431120|gb|AEC16179.1| macrolide transporter ATP-binding permease protein [Gallibacterium
anatis UMN179]
Length = 645
Score = 46.7 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 24/221 (10%), Positives = 79/221 (35%), Gaps = 1/221 (0%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG ++ +++ + + + + D + + +
Sbjct: 270 SLLTMLGIIIGITSVVCVVALGNGSQQKVLQNINSLGTNTMDIYNGTGFGDRRAESMQNL 329
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
+ D ++ ++ S G+ + + + G +
Sbjct: 330 TVNDSEALMRQPYIESVTPNSSVSGTLTYRNSAFTAQVRGVSEQYFNVKGIQTVAGQLFS 389
Query: 149 GVIIGKDLARNLGISIGDKINILSPYG-DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMV 207
G + ++ + + K M K ++ + + + ++ +
Sbjct: 390 GEQVKQNQSVAVIDQNTQKRIFQDRNPLGQIIMINKKPLKVIGIVDIQNVMGVNRESLNI 449
Query: 208 YMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
++ A + E +S I V V + +N+ +L
Sbjct: 450 WIPYTTAMNKISGEKKISSITVKVNQGISTAAAEKNVTALL 490
>gi|289810633|ref|ZP_06541262.1| outer membrane-specific lipoprotein transporter subunit LolE
[Salmonella enterica subsp. enterica serovar Typhi str.
AG3]
Length = 187
Score = 46.7 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 28/64 (43%)
Query: 206 MVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFF 265
+ L++AQ Y ++ ++VSGI + V D K + + + V + W Y +
Sbjct: 1 FAMIPLEDAQQYLDMGSSVSGIALKVHDVFNANKLVRDAGEVTNSYVYIKSWIGTYGYMY 60
Query: 266 SCYE 269
+
Sbjct: 61 RDIQ 64
>gi|189347034|ref|YP_001943563.1| hypothetical protein Clim_1534 [Chlorobium limicola DSM 245]
gi|189341181|gb|ACD90584.1| protein of unknown function DUF214 [Chlorobium limicola DSM 245]
Length = 421
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 33/250 (13%), Positives = 86/250 (34%), Gaps = 20/250 (8%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A + SN+ +F ++ +GV+IG++++ ++ + +NG K + I
Sbjct: 15 SLKIALFQIQSNKIRSF------LTALGVIIGIVSITMMGTAINGIDIGFEKSLSMIGYD 68
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
V+ QK ++ R A + +
Sbjct: 69 VIYVQKTSWSTMGEWWRYRNRPDLKTEYAQQINRIIADNPATEIEIAVPQMSTYQAMATY 128
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL---------SPYGDVT 178
+ F + ++ + + G S G ++ + P +
Sbjct: 129 KDRVLEQIFSLGTNQEYLKTASGDLAAGRFFTPGESAGSEMVCVVGDDIASGLFPNENAL 188
Query: 179 PMGMGIRSKSYTVLGMFRMRFP----DYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
+ ++++ + ++G+F+ + + V M L + + + V+ I V +KD
Sbjct: 189 GKTISLKNRKFRIVGVFKKQGKFLGLFSFDNQVIMPLGAFEKVYGRKMFVT-IRVKIKDE 247
Query: 235 DAIEKTHENI 244
+ + E +
Sbjct: 248 SRVAEAKEEL 257
>gi|297619398|ref|YP_003707503.1| protein of unknown function DUF214 [Methanococcus voltae A3]
gi|297378375|gb|ADI36530.1| protein of unknown function DUF214 [Methanococcus voltae A3]
Length = 395
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 38/260 (14%), Positives = 85/260 (32%), Gaps = 19/260 (7%)
Query: 14 RYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQK 73
R + R S ++ IG++IG+MA++ ++S+ G + + + + ++V
Sbjct: 12 RNMVQKRTQ------SLLTIIGIVIGIMAIVSLISLGYGVQNYIQDSITSVGANIVSVYS 65
Query: 74 YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSF 133
++F + +KV+ V G V S G+ V + +
Sbjct: 66 KGLGASG----TVVEFDKNDVKVVEKVRGVDSVMYGSLKGANVEFKKGEEQFLTINGVEP 121
Query: 134 SRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLG 193
S++ S IG+ + + DV + + +
Sbjct: 122 SQYTTIYSEALKYELESGRWLKETDKSACIIGNGVAYDTYERDVKVGDKLLIADKKYKVV 181
Query: 194 MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNG-- 251
D + E+ F+ + + +VKD D +E+ E++ L +
Sbjct: 182 GILEEVGDPGEAKTIVIPMESSSLFD-DEEYQYMIAYVKDVDEVERVAEDMRENLEDERH 240
Query: 252 ------VVVIDWQQRYQIFF 265
+ ++ F
Sbjct: 241 EDDFEVYTAQNIAEQVSNIF 260
>gi|154490311|ref|ZP_02030572.1| hypothetical protein PARMER_00544 [Parabacteroides merdae ATCC
43184]
gi|154088922|gb|EDN87966.1| hypothetical protein PARMER_00544 [Parabacteroides merdae ATCC
43184]
Length = 406
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 11/65 (16%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A R L +N+ F ++ +G++IGV ++I ++++ G + + ++ + ++
Sbjct: 7 IKIAVRALANNKLRGF------LTMLGIIIGVASVITMLAIGQGSKRSIQAQISEMGSNM 60
Query: 69 VIQQK 73
++
Sbjct: 61 IMIHP 65
>gi|20092759|ref|NP_618834.1| ABC transporter, permease protein [Methanosarcina acetivorans C2A]
gi|19918053|gb|AAM07314.1| ABC transporter, permease protein [Methanosarcina acetivorans C2A]
Length = 412
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 26/229 (11%), Positives = 71/229 (31%), Gaps = 3/229 (1%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ A++ +S+ F + + + +I P + Y +
Sbjct: 30 SGLTTLGIVIGIAAVVANISLGESFNIFFEEEINAQGSNFIIIYSQEPNLFYNNELQIIK 89
Query: 89 FIPDVIKVLPFVSG-QAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRG 147
P + +V P ++ D + + F +
Sbjct: 90 KTPGISRVSPIKQQLGVATYFSQKKNIDIVGVTGDYEDTANITMESGSFIRDQDAFSAAI 149
Query: 148 KGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMV 207
+ + RN+ I + G+ ++ ++ F + + +
Sbjct: 150 GSKVANEKFDRNISARSSIDITLRLEGGETMTRTFKVKGIIKSLNTSF-VGGGIDRDVSI 208
Query: 208 YMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
++ + E+ S + + +E+ + + R L V
Sbjct: 209 FIPVSTINQMLE-EDDFSAFFAMSDNIEDVEEVSDEVDRRLARNFGVSS 256
>gi|320160287|ref|YP_004173511.1| putative ABC transporter permease protein [Anaerolinea thermophila
UNI-1]
gi|319994140|dbj|BAJ62911.1| putative ABC transporter permease protein [Anaerolinea thermophila
UNI-1]
Length = 410
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 34/244 (13%), Positives = 72/244 (29%), Gaps = 13/244 (5%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A L +N+ S ++ +G++IGV A+I ++S+ G + ++ G+ ++
Sbjct: 10 ALESLSANKLR------SGLTMLGIIIGVAAVIAMISLGRGVEASVNDQLAGVGSTLITL 63
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
L ++ F QA + ++ S + + +
Sbjct: 64 FAMPDREVRNPQPLTLSDAEALMDAAHFPEVQAVAAEINLNASVSFGTVNTATSILGVTA 123
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKD----LARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
++ N+ D + + + + G R
Sbjct: 124 NYKDVQNLHLNEGDFIHEEQVLGQSAVAVLGARAAKTLFEREAGIVGETIRIDGQPYRVI 183
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE---NAVSGIEVFVKDPDAIEKTHENI 244
+ V + + A+L E V I V V+ I+ E I
Sbjct: 184 GVLRSRGSGGLSFTQTDNAVLIPITTAKLRLAPERVRGEVDLITVQVRSASQIKAVSERI 243
Query: 245 VRIL 248
L
Sbjct: 244 TETL 247
>gi|307256651|ref|ZP_07538430.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306864699|gb|EFM96603.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
Length = 640
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 22/241 (9%), Positives = 77/241 (31%), Gaps = 7/241 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + +++ + ++ +G++IG+ ++I V+++ G ++ ++ + + +
Sbjct: 252 SFKMAINAITAHKLR------ALLTMLGIVIGITSVISVVALGQGSQQQILSNINSLGTN 305
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + + I D + + + + G+ + + +
Sbjct: 306 TMTIMNGTGFGDRRANLTKNLTISDAMMLNKQQFVDSTTPSSNLNGTVIYGNTNVTASIN 365
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ F G + + K ++ + + +
Sbjct: 366 GVGEQFVNVKGLKMISGRFFDADEVKLSSQVVVIDGNTKK-DLGLTAPVEGKVILVDKKP 424
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ + + ++M + E + + V VKD + ++I +
Sbjct: 425 LTVIGMAQESNNLNQTSLKMWMPYTTLMQRISGEKFIDSLTVKVKDNVESQTAEKSINEL 484
Query: 248 L 248
L
Sbjct: 485 L 485
>gi|255099605|ref|ZP_05328582.1| ABC transporter, permease protein [Clostridium difficile QCD-63q42]
Length = 822
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 29/248 (11%), Positives = 61/248 (24%), Gaps = 8/248 (3%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
FE +AW L N+ I+I S I + V +S + +
Sbjct: 431 IKNFERHLAWLNLKRNKGRTIITILSLFMSI-------TVFVALSEFSNVLDVSRSVSNL 483
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
G + + + + + +
Sbjct: 484 KEGDFSLTNEISGFDKSTLDKITKMKNVNRTSFIKYSEYKQGEIDTDINFENSGEMLKII 543
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + + K+ + + L P +T
Sbjct: 544 GIDEQTLKDLMPSITDSILEDFKNGSICFIKNPIAISTPGVKTRHTNLKPKDSITINKKQ 603
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ S F + V + N +N + I ++ KD +E+ +
Sbjct: 604 LDIYSTVDKMFFLQGNGWINGVDVIVYDSVYNTLTN-KNKFNQINIYAKDKSKLEQIGLS 662
Query: 244 IVRILGNG 251
I +I N
Sbjct: 663 IEQICENN 670
>gi|145299912|ref|YP_001142753.1| ABC-type transporter, ATP-binding protein [Aeromonas salmonicida
subsp. salmonicida A449]
gi|142852684|gb|ABO91005.1| ABC-type transporter, ATP-binding protein [Aeromonas salmonicida
subsp. salmonicida A449]
Length = 646
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 32/247 (12%), Positives = 79/247 (31%), Gaps = 7/247 (2%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A + ++R F ++ +G++IG+ A++ V+++ G R ++ ++ + + +
Sbjct: 259 MALHAMLAHRMRTF------LTMLGIIIGIAAVVSVVALGQGARAKVVDQINAMGTNTID 312
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
D + + + D+ +L + ++S G S+ +
Sbjct: 313 IFPGKDWGDEKAASIQTLNKRDLDALLGQPYLEGASPQIASSGQLRYRNKTSSGSIVGVG 372
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
+ F R G I A + + + + +G
Sbjct: 373 SDFFRVKGMKLTSGRLFDERDIQNRAAVAVVDGKTIESLLGKEDPVGQVVLVGTLPVRII 432
Query: 191 VLGMFRMRFPDYDNG-MVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
+ F V++ +N S + + VKD + + +L
Sbjct: 433 GVVEEETGFGRSSQSVNVWLPYSAVMSRLISQNHFSQLTIRVKDGVQPALAEQAAIELLT 492
Query: 250 NGVVVID 256
V D
Sbjct: 493 QRHGVKD 499
>gi|317052086|ref|YP_004113202.1| ABC transporter-like protein [Desulfurispirillum indicum S5]
gi|316947170|gb|ADU66646.1| ABC transporter related protein [Desulfurispirillum indicum S5]
Length = 645
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 30/238 (12%), Positives = 80/238 (33%), Gaps = 7/238 (2%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A R L SN + ++ +G++IGV ++I ++++ +G ++++++R+ + +++
Sbjct: 260 AVRALRSN------IFRTILTLLGIVIGVASVITMLAIGDGAKQEVVERISSLGSNLLTV 313
Query: 72 QKYYPLVDYQFIANRLDFIPDV-IKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
+ P + + L V ++ L V S + + +
Sbjct: 314 RPGAPNMRGRGGIATLVPDDVVAVRELSNVLAAVPEQSSSVTVRFGNFDHRTEVNGTSAD 373
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
+R + F +A G +
Sbjct: 374 FPVARAWHPAEGTFFSADDERSYATVAVVGQTVSSALFPSGDALGQFILINNIPFQIIGI 433
Query: 191 VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ + +V + + L + + + + V+D I++T E + +L
Sbjct: 434 MDERGAGLGGQDQDDVVLVPFTTSSLRLTGQRFLRNMIIAVEDVRQIDQTQEEVHALL 491
>gi|325002302|ref|ZP_08123414.1| hypothetical protein PseP1_26235 [Pseudonocardia sp. P1]
Length = 402
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+A R L +N+ S ++ +G++IGV A+IV++++ NG +
Sbjct: 9 LALRGLRANKLR------SALTTLGIIIGVSAVIVLVALGNGIQRGFSDSF 53
>gi|313680712|ref|YP_004058451.1| hypothetical protein Ocepr_1826 [Oceanithermus profundus DSM 14977]
gi|313153427|gb|ADR37278.1| protein of unknown function DUF214 [Oceanithermus profundus DSM
14977]
Length = 379
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 23/241 (9%), Positives = 71/241 (29%), Gaps = 19/241 (7%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
++ WR L + S +++G+ + ++++ +S G R+ ++ + +
Sbjct: 5 LLVWRNLTARFTR------SLFTWLGIAVATASMVLFLSFGEGLRQALVSEMGNFGPQIR 58
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ + + + + + + P + V +
Sbjct: 59 VVAEGTDVFSPPQPELPPEMLEQIRAMAPELG---------IRKIIPSVMLVRGGFDPTS 109
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
F L + ++ + R +
Sbjct: 110 SFIFHGLPEGADPRDFYPPAKAAAGRLDPHPDGAVVGAKKAELSKLTLGKPLRLSREVTV 169
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD-AIEKTHENIVRIL 248
V+G+ + ++++ L+ Q +N G+ + + DPD +E+ + +
Sbjct: 170 PVVGILE-PASGLVDSLIFVPLKTLQQVLGTKNY--GVFMILLDPDAKVEEVARKLEAAI 226
Query: 249 G 249
Sbjct: 227 P 227
>gi|269123470|ref|YP_003306047.1| hypothetical protein Smon_0697 [Streptobacillus moniliformis DSM
12112]
gi|268314796|gb|ACZ01170.1| protein of unknown function DUF214 [Streptobacillus moniliformis
DSM 12112]
Length = 401
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 35/261 (13%), Positives = 88/261 (33%), Gaps = 17/261 (6%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDM-------IKRV 61
+ ++ + L+ + +F ++ +G+++G+ +++++ S+ GF + ++
Sbjct: 7 IKLSLKSLYGFKMRSF------LTTLGIIVGIGSVVMISSIGAGFENGLLSDVAKTYSKL 60
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ ++ + K +Y F N + + + V Q + G+ G LV +
Sbjct: 61 INVSINNQKLDKASASRNYYFTENDMLLMEKQNSNIDKVFVQNSLIGIDGNGRYYLVTAL 120
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
F L S + ++F + + + + +
Sbjct: 121 GEKAFKVLTPKISYGRSFIDDEFKSKNNLALIGRTSAISLFGSEKEALGKQISFETFNY- 179
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ + + + + YF+ S I + VKD I+ T
Sbjct: 180 ETKENLTIIGTFVEPHENIKKTFNENSVDVITNDSYFSGIKFNSSITIKVKDEQNIKNTV 239
Query: 242 ENIVRILG---NGVVVIDWQQ 259
E I L + + D +Q
Sbjct: 240 EQIKNYLNKKSDNNDIYDVKQ 260
>gi|237715043|ref|ZP_04545524.1| ABC transporter [Bacteroides sp. D1]
gi|229444876|gb|EEO50667.1| ABC transporter [Bacteroides sp. D1]
Length = 361
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 45/220 (20%), Positives = 79/220 (35%), Gaps = 15/220 (6%)
Query: 57 MIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
+ N V + +P+V + L P++ V F + + + V
Sbjct: 8 FGSHIQITNLDAVSSYETHPIVVGDSMMTALADYPEISHVQRFSTKPGMIKTDDAFQGMV 67
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
L D +++ V +D V+I K LA + + +GDKI D
Sbjct: 68 LKGVGPEFDPHFIKEYLVEGEIPVFSDSVSTNQVLISKALATKMKLKLGDKIYTYYIQDD 127
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPD 235
+ R++ T+ G+++ F +YDN + L V+G+E+ VKD D
Sbjct: 128 I-------RARRLTIAGIYQTNFSEYDNLFLLTDLNLVNRLNGWQPEQVTGVELQVKDYD 180
Query: 236 AIEKTHENI-------VRILGNGVVVIDWQQRYQIFFSCY 268
+E I LG V + +Q F+
Sbjct: 181 KLEDITYEIATDIDNRQDELGGVYYVRNIEQLNPQIFAWL 220
>gi|218259440|ref|ZP_03475172.1| hypothetical protein PRABACTJOHN_00830 [Parabacteroides johnsonii
DSM 18315]
gi|218225094|gb|EEC97744.1| hypothetical protein PRABACTJOHN_00830 [Parabacteroides johnsonii
DSM 18315]
Length = 406
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 11/65 (16%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A R L +N+ F ++ +G++IGV ++I ++++ G + + ++ + ++
Sbjct: 7 IKIAVRALANNKLRGF------LTMLGIIIGVASVITMLAIGQGSKRSIQAQISEMGSNM 60
Query: 69 VIQQK 73
++
Sbjct: 61 IMIHP 65
>gi|227114538|ref|ZP_03828194.1| macrolide-specific ABC-type efflux carrier [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
Length = 650
Score = 46.3 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 28/251 (11%), Positives = 77/251 (30%), Gaps = 8/251 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + + R F ++ +G++IG+ +++ V+++ G +E ++ + +
Sbjct: 259 AFKMALLAMNAQRMRTF------LTMLGIIIGIASVVSVVALGKGSQEQVLADINSMGTS 312
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D A + D+ + + +S+ + ++ S
Sbjct: 313 TLEIFPGKDFGDMDASAIQTLRASDIQPLTQQPYVHSVTPSISTSVTMRYGNIAVSASIS 372
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ F G + + + + +
Sbjct: 373 GVGEQFFTVRGYTLQRGVLFPRSSVDELKQDAVIDKNTLNKLFPHGEDPIGQVILLGSLP 432
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ V+ + F +N V++ ++ + I V VKD + ++I
Sbjct: 433 VRIIGVVSKNQGGFGSDENLNVWVPYTTVMKRMVGQSYLKSITVRVKDNMDMNVAEKSIT 492
Query: 246 RILGNGVVVID 256
+L D
Sbjct: 493 ALLTQRHGTKD 503
>gi|322411555|gb|EFY02463.1| ABC transporter permease protein [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 406
Score = 46.3 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 31/254 (12%), Positives = 72/254 (28%), Gaps = 22/254 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A ++ ++ S ++ +G++IGV A++++M + N ++ + L N
Sbjct: 4 WKFALSSIWGHKMR------SILTMLGIIIGVSAVVIIMGLGNAMKKGVTD-TLSNNQKE 56
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ D A + +++ + S
Sbjct: 57 LQLYYKAKDEDEDLYAISDSNQSNHPVKSEWLNQITREINGIDTYYVTNSASATISYEKK 116
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGD--------------KINILSPY 174
++ + + + ++ G+ L + + K N +
Sbjct: 117 KMDNVTITGASQDYFKVKNYDIVAGRTLKVSDYHNFSRIVLLDTVLSDELFGKDNYKNAL 176
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
V +G G M+ + FN + V I V V+D
Sbjct: 177 NKVVNVGNKDYLVIGVYKSSQNSIMKGGLIGSAVMANTQVASEFNAK-EVDSIYVHVRDI 235
Query: 235 DAIEKTHENIVRIL 248
E ++L
Sbjct: 236 RQSLTLGEKAAQML 249
>gi|87122130|ref|ZP_01078014.1| hypothetical protein MED121_04273 [Marinomonas sp. MED121]
gi|86162677|gb|EAQ63958.1| hypothetical protein MED121_04273 [Marinomonas sp. MED121]
Length = 413
Score = 46.3 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 50/275 (18%), Positives = 105/275 (38%), Gaps = 27/275 (9%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALI----VVMSVMNGFRED 56
M + F +A + NR+ + I++ S + IGV++LI V S+ G RE+
Sbjct: 1 MLSINFFRYKIALLNVLRNRRRSLITLLS------IQIGVVSLILFGGFVASMYEGMREN 54
Query: 57 MIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGL------- 109
MI+ LG Y ++ + + + V ++ ++ ++
Sbjct: 55 MIRSQLGHLQIYQAGFNQYGHIEPEQYLLTQEQVQQVSNLVSGLAEVELLTPRLDFSGLI 114
Query: 110 -SSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKI 168
+ S +V + D L +S + G ++G+ L L +IGD +
Sbjct: 115 TNGNQSVAVVGNGIDPDKEALLSSAITLIEGEDLFPEDQAGALVGQGLYNALNANIGDYL 174
Query: 169 NILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIE 228
+L+ D + + ++G + DN ++ ++L AQ + VS +
Sbjct: 175 TLLASTADG-----AVNAVDVQIVGAINTGTREVDNRLLRINLSHAQDLQFTQG-VSRLV 228
Query: 229 VFVKDPDAIEKTHENIVRILGNG---VVVIDWQQR 260
V +KD + + + ++ + + W Q
Sbjct: 229 VLLKDTAQTQIVMDKLSQLFEQEGLTLEMRSWSQL 263
>gi|251771099|gb|EES51683.1| putative permease [Leptospirillum ferrodiazotrophum]
Length = 718
Score = 46.3 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 31/277 (11%), Positives = 69/277 (24%), Gaps = 23/277 (8%)
Query: 4 FSRFEVIV--AWRYLFSNRKNAFISIASFISFIGVMIGVM-ALIVVMSVMNGFREDMIKR 60
+ + + R L +A+ ++ G+ +G L +V + +
Sbjct: 1 MTTLLFFLQYSLRNLRR------TPLATTLTLFGISLGTAIVLAIVQADRSSLLSFKNAV 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ V+ + +R++ + V G +
Sbjct: 55 NHVRDPAVLSLVAPSGVFFSDRSIDRIEEALGPAPFRISPLLELTVVVQERGHTVPKGGA 114
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + + G L + K+ P
Sbjct: 115 QGQTFLLKGLDFLESADRPPEKNAREILSSPGGVYLPPHTLDLWHFKVGETIPV----AY 170
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI--- 237
G +R + L AQ F E ++ +++ P I
Sbjct: 171 GTATVPLKILGEIPETLRSQMLPRNTFLIDLSWAQTLFGKEGEITRVDLLWDGPRKIKPS 230
Query: 238 ----EKTHENIVRILGNGVVVIDWQQ---RYQIFFSC 267
E ++ LG V V+ ++ +Y S
Sbjct: 231 HRLVEALASHLQASLGKEVRVLSRKERKSQYDSMLSA 267
>gi|13471429|ref|NP_102995.1| permease protein of ABC transporter [Mesorhizobium loti MAFF303099]
gi|14022171|dbj|BAB48781.1| permease protein of ABC transporter [Mesorhizobium loti MAFF303099]
Length = 405
Score = 46.3 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 36/266 (13%), Positives = 79/266 (29%), Gaps = 23/266 (8%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV--LGINGHV 68
++ R + N +F+++ +G++IGV A+I ++++ +G + + + LG N V
Sbjct: 8 LSLRSIRRNVLRSFLTL------LGIVIGVAAVIAMLTIGSGTTQKVKADISKLGSNLLV 61
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
V + + + + + + + V V + S S
Sbjct: 62 VRAGRPAGPGGPGGLDQVVRPLAEKDLAALVAHLTGARAISPASQKQVRVIFGTESLTSG 121
Query: 129 LQNSFSRFYGNVSND-----FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + S + G + P G++ +
Sbjct: 122 VTGTDSAYLDARDWKLVSGRPFSDSETRSGTGVCLIGETVRQQFFGAGDPEGEIIRVNRT 181
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD-------A 236
+ F + +V M L Q + I + D
Sbjct: 182 SCKIIGLLEPKGYTGFGQDQDNVVLMPLHAYQRRIAGNRDIDNIYIAADDRTPTSELQPR 241
Query: 237 IEKTHENIVRILGN---GVVVIDWQQ 259
+E +I RI + + D Q
Sbjct: 242 VEDILRDIRRITPDRESDFAIRDMTQ 267
>gi|37525538|ref|NP_928882.1| macrolide transporter ATP-binding /permease protein [Photorhabdus
luminescens subsp. laumondii TTO1]
gi|81834016|sp|Q7N6F9|MACB_PHOLL RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|36784966|emb|CAE13884.1| Macrolide-specific ABC-type efflux carrier protein MacB
[Photorhabdus luminescens subsp. laumondii TTO1]
Length = 647
Score = 46.3 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 31/253 (12%), Positives = 84/253 (33%), Gaps = 16/253 (6%)
Query: 3 IFSRF--EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
IF RF + +AWR + N+ + ++ +G++IG+ +++ ++ + + R ++
Sbjct: 249 IFGRFNEALFMAWRAMVVNKMR------TLLTMLGIIIGIASVVTILVIGDAARASVLSD 302
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ I + + ++ + I ++ + +R
Sbjct: 303 IKEIATNTIDIYPGEDFGIDDPVSKQALKI---ADADAIKVQPYILAVSPEIEGQMRLRK 359
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ S + ++ + F +G G + + + I +
Sbjct: 360 GNIDVSSKVTGVGDEYFQVYALRFAQGIGFSLDMIRRQGQVVVIDKNTQRKLFPHQKNVI 419
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNG-----MVYMSLQEAQLYFNLENAVSGIEVFVKDPD 235
G I + + + + G +++ + + I V VKD
Sbjct: 420 GEVILVGNMPATIVGVIANRESAFGNSKLLHIWLPYSTMTSRLMNRSYLDSITVRVKDDY 479
Query: 236 AIEKTHENIVRIL 248
+ + IV++L
Sbjct: 480 NSKDAEKMIVQLL 492
>gi|295110451|emb|CBL24404.1| ABC-type antimicrobial peptide transport system, permease component
[Ruminococcus obeum A2-162]
Length = 410
Score = 46.3 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 30/269 (11%), Positives = 79/269 (29%), Gaps = 20/269 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV--LGING 66
+ +A + + +N+ +F ++ +G++IG+ ++I ++S+ G + M + +G
Sbjct: 8 IKMAVQNIRANKGRSF------LTMLGIIIGIASVIAIVSIGEGTKNQMNSEIDGIGGGQ 61
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
V A + + ++ V +++ +G + +
Sbjct: 62 IAVSVSNDAITESEFITAEDVQAVREIDTVEGVNVSESYDGETVTGKGNFSIMLTAEGPD 121
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ L N+ YGN + + +G + + G +
Sbjct: 122 AKLLNNSEMKYGNYFGENEIEEGKNVCVISDADAKRLFGTDDVVGMNLDITCYDSSKSFR 181
Query: 187 KSYTVLGM----FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
F D V + + + + + + +
Sbjct: 182 IMGVTTQKENGTFVSYTYDGMPVAVNIPYSSMEDLAGAADEFYSLTIQGDKTLDSQIIAD 241
Query: 243 NIVRIL--------GNGVVVIDWQQRYQI 263
+V +L V +Q Q
Sbjct: 242 QVVHVLEKRHQCAGEEYFQVQSFQDVMQS 270
>gi|150398809|ref|YP_001322576.1| hypothetical protein Mevan_0049 [Methanococcus vannielii SB]
gi|150011512|gb|ABR53964.1| protein of unknown function DUF214 [Methanococcus vannielii SB]
Length = 397
Score = 46.3 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 34/258 (13%), Positives = 88/258 (34%), Gaps = 14/258 (5%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A + + + S ++ IG++IG++A++ ++S+ G + + + + ++
Sbjct: 10 AGKNITRKKTQ------SSLTIIGIVIGILAIVSLISLGYGVQNYIRGEITTVGADIISI 63
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
N + + V G + V GG + R + +YL
Sbjct: 64 LPSQEFGGPVSGKNF---KDKDVNAIKNVKGISNVLPGWFGGQIIEYRDQKSYANTYLIT 120
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTV 191
+++ D +N I + + I Y V
Sbjct: 121 PSIYSDIFINSFGYSLDSGRWLNDNDKNSCILGYNVAKNTFNREVRVGDRVTIGDNRYKV 180
Query: 192 LGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL--- 248
+G+ + ++ + + + + F +++ + I V V+ + + K E+I + +
Sbjct: 181 VGILKETGNPRNDNAITLPYESSNDLFKIKDEYNIITVSVRPGEDVVKISEDIKKEIEKS 240
Query: 249 --GNGVVVIDWQQRYQIF 264
V+ +Q +
Sbjct: 241 RGDENFSVLTSEQLAESI 258
>gi|330946756|gb|EGH47670.1| LolC/E family lipoprotein releasing system, transmembrane protein
[Pseudomonas syringae pv. pisi str. 1704B]
Length = 184
Score = 46.3 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Query: 229 VFVKDPDAIEKTHENIVRILG-NGVVVIDWQQRYQIFFSCY 268
+ D A +T I + LG N DW + + +
Sbjct: 1 LKFDDLFAAPRTSWEIAQKLGENNFYSRDWTRTHGNLYQAI 41
>gi|325289036|ref|YP_004265217.1| protein of unknown function DUF214 [Syntrophobotulus glycolicus DSM
8271]
gi|324964437|gb|ADY55216.1| protein of unknown function DUF214 [Syntrophobotulus glycolicus DSM
8271]
Length = 395
Score = 46.3 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 38/247 (15%), Positives = 81/247 (32%), Gaps = 15/247 (6%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFRE-------DMIKRV 61
+ + + F + + ++ +GV G + ++ S+ G ++ RV
Sbjct: 4 LFFSIQNAFRKKA------VAVLAVLGVAFGTALMTILFSLSAGMDHRVEGTFRELSNRV 57
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ Y + ++ ++ I D+ V S + V + + + G
Sbjct: 58 TISGRDAIFGGLYLGMGTKPIPSSSIEAIRDIPHVEKVYSQVSVVLRPQNNDYSMPLFGY 117
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ L N+ + + +IIGK L + + + G
Sbjct: 118 GQEEIRDLANNPYNKI-IEGSAPGNDQEMIIGKSLQEYMNLLNSPFAIGKVYPFLILEEG 176
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ + V+G+++ D Q+ E +VS I V V D +E
Sbjct: 177 QAKKLE-LKVVGLYQTGNEVLDGAFSGSDKLARQIGRIPEGSVSAINVSVDGVDHVEAAA 235
Query: 242 ENIVRIL 248
E I + L
Sbjct: 236 EAIKQEL 242
>gi|88801157|ref|ZP_01116701.1| putative ABC transporter, permease protein [Reinekea sp. MED297]
gi|88776094|gb|EAR07325.1| putative ABC transporter, permease protein [Reinekea sp. MED297]
Length = 409
Score = 46.3 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 41/262 (15%), Positives = 95/262 (36%), Gaps = 8/262 (3%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMS---VMNGFREDMIKRVLG 63
+A R + N++ +++ + ++I + MS V + R +
Sbjct: 3 LTWKLALRNILRNKRRTTLTLLLISMTLAILIFTDGYMRAMSDVMVRSATRLYPGDGQIH 62
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
++ + + D RL + P A VS ++ + LV
Sbjct: 63 HVDYLAERDGEKVISDVDGHLQRLQSTEQIASYSPRAMDFAMVSSSANNLAVQLVGIDPQ 122
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + S G + R + ++IG+ LA L + +GD++ + ++
Sbjct: 123 LEAGVSKLESSLVQGEYLSSQGRSQQIMIGRPLAELLEVDLGDRLVVSVNNYEI----DS 178
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV-FVKDPDAIEKTHE 242
+ + + V G+F++ YD ++++ L AQ + + V I FV + + +++
Sbjct: 179 VDQRLFRVSGIFQLNSKFYDEALIFVPLASAQEMMGIGSNVHEIAFNFVDESLSSDESLA 238
Query: 243 NIVRILGNGVVVIDWQQRYQIF 264
+ G + W
Sbjct: 239 LWSELSGPQTIAEGWTTLMPDL 260
>gi|257439297|ref|ZP_05615052.1| macrolide export ATP-binding/permease protein MacB
[Faecalibacterium prausnitzii A2-165]
gi|257198172|gb|EEU96456.1| macrolide export ATP-binding/permease protein MacB
[Faecalibacterium prausnitzii A2-165]
Length = 398
Score = 45.9 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 28/255 (10%), Positives = 69/255 (27%), Gaps = 15/255 (5%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A + ++SN+ + ++ +G++IGV A+IV++ + NG + + + +++
Sbjct: 9 AVKNIWSNK------FRTVLTMLGIIIGVTAVIVIVGLGNGMTQSIKDSFSEMGTNILSV 62
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
Q + D + +V +S + + +
Sbjct: 63 QITGRGSRTVTVQQLYDIVDSHPEVFTGMSPTTTLDSTVKVDTTTYGYTSVKGVSETYLD 122
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTV 191
R + I+
Sbjct: 123 MMGRTLAQGRGLTYVDITDNKKVCVVG-DYIARAAYGGNAIGQTIKIGSERFTIVGVLEA 181
Query: 192 LGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN----IVRI 247
D+ M+++ AQ + S V + + ++ I I
Sbjct: 182 NVSSTTDQEGTDDDMIFVPYTTAQRISRT--SASSYGVVLVSDELADEGKNLLVVGIESI 239
Query: 248 L--GNGVVVIDWQQR 260
L +G + +
Sbjct: 240 LHAEDGYFITSLSEM 254
>gi|194366243|ref|YP_002028853.1| ABC transporter-like protein [Stenotrophomonas maltophilia R551-3]
gi|194349047|gb|ACF52170.1| ABC transporter related [Stenotrophomonas maltophilia R551-3]
Length = 650
Score = 45.9 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 34/257 (13%), Positives = 84/257 (32%), Gaps = 10/257 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A R + ++R F ++ +G++IG+ +++ V+++ G R+ ++ + + +
Sbjct: 260 AFRMALRAMNAHRMRTF------LTMLGIIIGIASVVAVVALGTGARQAILSNISSLGTN 313
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D D + + + G+++ G+ + ++
Sbjct: 314 TIEIYPGSGFGDLHSARVETLTPGDSVALARQPFVDSATPGVATSGTALRGNRSASVQVQ 373
Query: 128 YLQNSFSRFYG---NVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + R +G F + + + +P G +G
Sbjct: 374 GVSEQYFRVHGLKLGEGAFFGPPGVAGYQQMVVIDANTRERFFAATDNPIGQTLLLGNVP 433
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
V V++ A ++ VS I V V D ++E + I
Sbjct: 434 VRVVGVVKKDAGAAGDASLL-RVWLPYTTAMARVLGQSHVSSITVRVSDAISMEAAEQAI 492
Query: 245 VRILGNGVVVIDWQQRY 261
R+L D+
Sbjct: 493 ARLLTRRHGSTDFYMSN 509
>gi|238784504|ref|ZP_04628512.1| Macrolide export ATP-binding/permease protein macB [Yersinia
bercovieri ATCC 43970]
gi|238714567|gb|EEQ06571.1| Macrolide export ATP-binding/permease protein macB [Yersinia
bercovieri ATCC 43970]
Length = 649
Score = 45.9 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 23/243 (9%), Positives = 79/243 (32%), Gaps = 8/243 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+++AWR + +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 258 ALLMAWRAMSANKMR------TALTMLGIIIGIASVVSILVVGDAAKQMVLADIRAIGTN 311
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D++ + A +S + S
Sbjct: 312 TIDIYPGKDYGDDDPSTRQALVYDDMVALKEQSYVSAVSPTISGSMRLRYGNVDVAASVS 371
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG + + + + + +
Sbjct: 372 GVSEQYFHVYGMKLEQGTPITREQVERQSQVVVIDRNTQRRLFPHIKDVVGQVILVGNMP 431
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ V+ + F +++ + I + +K+ + ++ + +V
Sbjct: 432 ATVVGVVEEKQSMFGSSKALRIWVPYSTMASRLMGRSYFDSITIRIKEGYSSKEAEQQLV 491
Query: 246 RIL 248
R+L
Sbjct: 492 RLL 494
>gi|215426264|ref|ZP_03424183.1| adhesion component transport transmembrane protein ABC transporter
[Mycobacterium tuberculosis T92]
gi|289749514|ref|ZP_06508892.1| adhesion component ABC transporter permease [Mycobacterium
tuberculosis T92]
gi|289690101|gb|EFD57530.1| adhesion component ABC transporter permease [Mycobacterium
tuberculosis T92]
Length = 361
Score = 45.9 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 75/248 (30%), Gaps = 18/248 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
AWR L + +G+ +GV +IV + V + +
Sbjct: 13 WRTAWRRLRQRP------FQYILLVLGIALGVA-MIVAIDVSSNSAQRAFDLSAAAITGK 65
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ P + G GL + +
Sbjct: 66 STHRLVSGPAGVDQQLYVDLRRHGYDFSAPVIEGYVLARGLGNRAMQFMGTDPFAESAFR 125
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
++ + R GV++ + +A+ G+++GD+I + G
Sbjct: 126 SPLWSNQNIAELGGFLTRPNGVVLSRQVAQKYGLAVGDRIALQ-------VKGAPTTVTL 178
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+L + ++ + AQ F++ +S I++ +KD E T I + L
Sbjct: 179 VGLLTPADEVSNQKLSDLIIADISTAQELFHMPGRLSHIDLIIKD----EATATRIQQRL 234
Query: 249 GNGVVVID 256
GV +
Sbjct: 235 PAGVRMET 242
>gi|114778143|ref|ZP_01453030.1| hypothetical protein SPV1_00757 [Mariprofundus ferrooxydans PV-1]
gi|114551561|gb|EAU54115.1| hypothetical protein SPV1_00757 [Mariprofundus ferrooxydans PV-1]
Length = 412
Score = 45.9 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 42/262 (16%), Positives = 83/262 (31%), Gaps = 14/262 (5%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMA-----LIVVMSVMNGFREDMIKRVLGI 64
+AWR ++ ++ I+ S GVM+ V + G M +
Sbjct: 5 KLAWRNIWRRKRRTLITAFSI--GFGVMLSVTFTGSGDYTYTNMIDMGASMGMGHVTVEP 62
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
G+ + L + ++ +P V ++GQA + G +
Sbjct: 63 PGYHLKPTLDKRLTGTAKLQQQIMALPGVAGATVRITGQAMFASARKSVGGAFIAVDPEF 122
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + G+G++IG LA+ L + IG K+ + +
Sbjct: 123 ETAQNNLLLRSIVAGSMFAESSGRGMVIGSKLAKKLKVKIGKKVVYTTTDAHGEIVSDI- 181
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHEN 243
+ G+F D M + + Q + + I V + D E +
Sbjct: 182 ----ARITGIFTTGIDIVDGIMALLPISSVQKTLGYAPDEATLIAVVISDQRHAEGMRDA 237
Query: 244 IVRI-LGNGVVVIDWQQRYQIF 264
I R+ V+ W++
Sbjct: 238 IARLPAAADTAVMTWKKSQPDL 259
>gi|167753925|ref|ZP_02426052.1| hypothetical protein ALIPUT_02210 [Alistipes putredinis DSM
17216]
gi|167658550|gb|EDS02680.1| hypothetical protein ALIPUT_02210 [Alistipes putredinis DSM
17216]
Length = 406
Score = 45.9 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 10/65 (15%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A++ L +N+ F ++ +G++IGV ++I ++++ G + + ++ + ++
Sbjct: 7 FKIAFKALSNNKLRGF------LTMLGIIIGVGSVITMLAIGQGSKRSIQAQISEMGSNM 60
Query: 69 VIQQK 73
++
Sbjct: 61 IMIHP 65
>gi|45441056|ref|NP_992595.1| macrolide transporter ATP-binding /permease [Yersinia pestis biovar
Microtus str. 91001]
gi|45435915|gb|AAS61472.1| putative ABC transporter ATP-binding protein [Yersinia pestis
biovar Microtus str. 91001]
Length = 649
Score = 45.9 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 22/243 (9%), Positives = 79/243 (32%), Gaps = 8/243 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+++AWR + +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 258 ALLMAWRAMSANKMR------TALTMLGIIIGIASVVSILVVGDAAKQLVLADIRAIGTN 311
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+ + A + +
Sbjct: 312 TIDIYPGKDFGDDDPSTRQALVHDDMAALKAQSYVSAVSPSIGGSMRLRFGNIDVAASVL 371
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK--INILSPYGDVTPMGMGIR 185
+ + + R +G + + + + + + +
Sbjct: 372 GVSDEYFRVFGMAMEQGAPITREQVERQAPTVVIDLNTQRRLFPHMKDVVGQVILVGNMP 431
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ V+ + F V++ + I + +K+ + ++ + +V
Sbjct: 432 ATVVGVVAEKKSMFGSNKALRVWVPYSTMANRLMGRSYFDSITIRIKEGYSSKEAEQQLV 491
Query: 246 RIL 248
R+L
Sbjct: 492 RLL 494
>gi|315636150|ref|ZP_07891404.1| macrolide efflux ABC superfamily ATP binding cassette transporter,
membrane protein [Arcobacter butzleri JV22]
gi|315479511|gb|EFU70190.1| macrolide efflux ABC superfamily ATP binding cassette transporter,
membrane protein [Arcobacter butzleri JV22]
Length = 403
Score = 45.9 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 29/272 (10%), Positives = 85/272 (31%), Gaps = 22/272 (8%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ S ++A + + N + S ++ +G++IGV ++I ++ + +G + + +
Sbjct: 1 MLSN-AFLIAIKEIRRN------ILRSILTILGIVIGVASVIAMVMIGDGTTASVKESIT 53
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ +++ + N + Q + + + + +
Sbjct: 54 KLGTNMLTLRVGQERRGPPREDNSSKAFQNEDITAIKNEIQNIKGVAAENSTKMNIVYGN 113
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S+ S + + + ++ G+ + + IG I +
Sbjct: 114 KSNNSSVIGTNNDYFIIKDWALKDGRIFDDSELSSGKSSCIIGTTIVTQLFGDENPIGAS 173
Query: 183 GIRSKSYTVLGMF-----RMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
+ F + + +V + L+ Q + VS I + + + I
Sbjct: 174 IRLKNMTCNVIGVLASKGAAAFGNDQDEIVIVPLKMYQRKIKGDKDVSSIIISITEERYI 233
Query: 238 EKTHENIVRIL----------GNGVVVIDWQQ 259
E I ++ + + D +
Sbjct: 234 ENAKTEITSLMQERRAVKIGEPDNFHIRDMKD 265
>gi|238750604|ref|ZP_04612104.1| ABC transporter related [Yersinia rohdei ATCC 43380]
gi|238711252|gb|EEQ03470.1| ABC transporter related [Yersinia rohdei ATCC 43380]
Length = 643
Score = 45.9 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 30/239 (12%), Positives = 71/239 (29%), Gaps = 6/239 (2%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+AWR L +R AF +S +G++IG+ +++ M+V G R+ ++ + + +
Sbjct: 256 KMAWRSLLGHRIRAF------LSMLGIIIGISSVVSSMAVGEGARQQILNEISQLGTSNL 309
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ + R DV + + +S + V S +
Sbjct: 310 DVRPGLGWDKPRPDFERALSQQDVELLSQQPYVDSLSPVVSKMVAAVRGDKQVMVSLSGV 369
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
N F + G + + + + +
Sbjct: 370 SNGFFQVKGMSFTAGEGFTPRHVNAREPVIILQPELSDTLFAGGQNPIGEIVQLDGIPLR 429
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ R +M + + + I V V + + +++ +L
Sbjct: 430 VIGVAKRGGSSFGGLLAAWMPYTSLTERISGDIPLESIAVRVAEGYQLNAVQQDVENLL 488
>gi|22126690|ref|NP_670113.1| macrolide transporter ATP-binding /permease [Yersinia pestis KIM
10]
gi|51595731|ref|YP_069922.1| macrolide transporter ATP-binding /permease protein [Yersinia
pseudotuberculosis IP 32953]
gi|108806652|ref|YP_650568.1| macrolide transporter ATP-binding /permease [Yersinia pestis
Antiqua]
gi|108812776|ref|YP_648543.1| macrolide transporter ATP-binding /permease protein [Yersinia
pestis Nepal516]
gi|145599603|ref|YP_001163679.1| macrolide transporter ATP-binding /permease protein [Yersinia
pestis Pestoides F]
gi|149366622|ref|ZP_01888656.1| macrolide efflux transporter subunit [Yersinia pestis CA88-4125]
gi|165924455|ref|ZP_02220287.1| macrolide export ATP-binding/permease protein MacB [Yersinia pestis
biovar Orientalis str. F1991016]
gi|165938963|ref|ZP_02227516.1| macrolide export ATP-binding/permease protein MacB [Yersinia pestis
biovar Orientalis str. IP275]
gi|166009732|ref|ZP_02230630.1| macrolide export ATP-binding/permease protein MacB [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166211566|ref|ZP_02237601.1| macrolide export ATP-binding/permease protein MacB [Yersinia pestis
biovar Antiqua str. B42003004]
gi|167400017|ref|ZP_02305535.1| macrolide export ATP-binding/permease protein MacB [Yersinia pestis
biovar Antiqua str. UG05-0454]
gi|167419762|ref|ZP_02311515.1| macrolide export ATP-binding/permease protein MacB [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167424122|ref|ZP_02315875.1| macrolide export ATP-binding/permease protein MacB [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|167469766|ref|ZP_02334470.1| macrolide transporter ATP-binding /permease protein [Yersinia
pestis FV-1]
gi|170024920|ref|YP_001721425.1| macrolide transporter ATP-binding /permease [Yersinia
pseudotuberculosis YPIII]
gi|186894808|ref|YP_001871920.1| macrolide transporter ATP-binding /permease [Yersinia
pseudotuberculosis PB1/+]
gi|218928513|ref|YP_002346388.1| macrolide transporter ATP-binding /permease [Yersinia pestis CO92]
gi|229841331|ref|ZP_04461490.1| Macrolide-specific ABC-type efflux carrier [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229843435|ref|ZP_04463581.1| Macrolide-specific ABC-type efflux carrier [Yersinia pestis biovar
Orientalis str. India 195]
gi|229895808|ref|ZP_04510978.1| Macrolide-specific ABC-type efflux carrier [Yersinia pestis
Pestoides A]
gi|229903190|ref|ZP_04518303.1| Macrolide-specific ABC-type efflux carrier [Yersinia pestis
Nepal516]
gi|294503357|ref|YP_003567419.1| putative ABC transporter ATP-binding protein [Yersinia pestis
Z176003]
gi|81825870|sp|Q66CL2|MACB1_YERPS RecName: Full=Macrolide export ATP-binding/permease protein MacB 1
gi|122064299|sp|Q1CA99|MACB1_YERPA RecName: Full=Macrolide export ATP-binding/permease protein MacB 1
gi|122064300|sp|Q7CHI2|MACB1_YERPE RecName: Full=Macrolide export ATP-binding/permease protein MacB 1
gi|122064307|sp|Q1CGD7|MACB2_YERPN RecName: Full=Macrolide export ATP-binding/permease protein MacB 2
gi|21959707|gb|AAM86364.1|AE013884_11 putative ATP-binding component of ABC transport system [Yersinia
pestis KIM 10]
gi|51589013|emb|CAH20631.1| putative ABC transporter with fused permease and ATP-binding
domains [Yersinia pseudotuberculosis IP 32953]
gi|108776424|gb|ABG18943.1| ABC transporter ATP-binding protein [Yersinia pestis Nepal516]
gi|108778565|gb|ABG12623.1| putative ABC transporter ATP-binding protein [Yersinia pestis
Antiqua]
gi|115347124|emb|CAL20017.1| putative ABC transporter ATP-binding protein [Yersinia pestis CO92]
gi|145211299|gb|ABP40706.1| ABC transporter ATP-binding protein [Yersinia pestis Pestoides F]
gi|149290996|gb|EDM41071.1| macrolide efflux transporter subunit [Yersinia pestis CA88-4125]
gi|165913110|gb|EDR31734.1| macrolide export ATP-binding/permease protein MacB [Yersinia pestis
biovar Orientalis str. IP275]
gi|165923515|gb|EDR40647.1| macrolide export ATP-binding/permease protein MacB [Yersinia pestis
biovar Orientalis str. F1991016]
gi|165991128|gb|EDR43429.1| macrolide export ATP-binding/permease protein MacB [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166207337|gb|EDR51817.1| macrolide export ATP-binding/permease protein MacB [Yersinia pestis
biovar Antiqua str. B42003004]
gi|166962503|gb|EDR58524.1| macrolide export ATP-binding/permease protein MacB [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167050725|gb|EDR62133.1| macrolide export ATP-binding/permease protein MacB [Yersinia pestis
biovar Antiqua str. UG05-0454]
gi|167056971|gb|EDR66734.1| macrolide export ATP-binding/permease protein MacB [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|169751454|gb|ACA68972.1| ABC transporter related [Yersinia pseudotuberculosis YPIII]
gi|186697834|gb|ACC88463.1| ABC transporter related [Yersinia pseudotuberculosis PB1/+]
gi|229678960|gb|EEO75063.1| Macrolide-specific ABC-type efflux carrier [Yersinia pestis
Nepal516]
gi|229689782|gb|EEO81843.1| Macrolide-specific ABC-type efflux carrier [Yersinia pestis biovar
Orientalis str. India 195]
gi|229697697|gb|EEO87744.1| Macrolide-specific ABC-type efflux carrier [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229700731|gb|EEO88760.1| Macrolide-specific ABC-type efflux carrier [Yersinia pestis
Pestoides A]
gi|262361397|gb|ACY58118.1| putative ABC transporter ATP-binding protein [Yersinia pestis
D106004]
gi|262365066|gb|ACY61623.1| putative ABC transporter ATP-binding protein [Yersinia pestis
D182038]
gi|294353816|gb|ADE64157.1| putative ABC transporter ATP-binding protein [Yersinia pestis
Z176003]
gi|320015780|gb|ADV99351.1| Macrolide-specific ABC-type efflux carrier [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 649
Score = 45.9 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 22/243 (9%), Positives = 79/243 (32%), Gaps = 8/243 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+++AWR + +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 258 ALLMAWRAMSANKMR------TALTMLGIIIGIASVVSILVVGDAAKQLVLADIRAIGTN 311
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+ + A + +
Sbjct: 312 TIDIYPGKDFGDDDPSTRQALVHDDMAALKAQSYVSAVSPSIGGSMRLRFGNIDVAASVL 371
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK--INILSPYGDVTPMGMGIR 185
+ + + R +G + + + + + + +
Sbjct: 372 GVSDEYFRVFGMAMEQGAPITREQVERQAQTVVIDLNTQRRLFPHMKDVVGQVILVGNMP 431
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ V+ + F V++ + I + +K+ + ++ + +V
Sbjct: 432 ATVVGVVAEKKSMFGSNKALRVWVPYSTMANRLMGRSYFDSITIRIKEGYSSKEAEQQLV 491
Query: 246 RIL 248
R+L
Sbjct: 492 RLL 494
>gi|294012584|ref|YP_003546044.1| ABC-type transport system permease component [Sphingobium japonicum
UT26S]
gi|292675914|dbj|BAI97432.1| ABC-type transport system permease component [Sphingobium japonicum
UT26S]
Length = 416
Score = 45.9 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 40/274 (14%), Positives = 89/274 (32%), Gaps = 26/274 (9%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
VA R+L R+ ++++ +G + V A+++ G + D I+ ++ H++I
Sbjct: 11 VAARHLVGRRRQTIVAVSGVAVGVGFFLAVSAMMI------GSQNDFIRTLIDAAPHIII 64
Query: 71 QQKYY------------------PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSG 112
+ + L P++++ + + G LS
Sbjct: 65 SDELRSPPPQPGVSLYKGAAVKLRHYKVRNEVRGLKSWPEILRTVDALPGAIGSPSLSGA 124
Query: 113 GSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILS 172
+ + + + + G+ + + + L
Sbjct: 125 ITLRSGGREEALTIVGVDPAIEEKVSTIQDQLRIGRLRDLESTQGGIIIGEEMARRLGLG 184
Query: 173 PYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK 232
V +S+S ++G+F+ +G Y+ L+EAQ ++ I V +
Sbjct: 185 VGDVVGATSASGKSRSLRIVGLFKRGQTQISSGFGYVLLREAQSLLGRPFIINRIGVRLA 244
Query: 233 DPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFS 266
DP + + WQ+R F S
Sbjct: 245 DPYEAQPVSRRLEAR--YAYKAESWQERSADFLS 276
>gi|149188630|ref|ZP_01866922.1| hypothetical protein VSAK1_16127 [Vibrio shilonii AK1]
gi|148837540|gb|EDL54485.1| hypothetical protein VSAK1_16127 [Vibrio shilonii AK1]
Length = 409
Score = 45.9 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 38/259 (14%), Positives = 87/259 (33%), Gaps = 18/259 (6%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV------L 62
+ +AWR L+ ++ ++ ++ + ++ S G I L
Sbjct: 3 LKLAWRNLWRQKRRTLLTASALALAL------FLSLLTRSFQEGSYNANIDNAARFYTGL 56
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSG-QAFVSGLSSGGSGVLVRGI 121
H + + ++ ++ V + ++ + S ++
Sbjct: 57 IQLQHPEYAESNSIDDVISGDLEQFPYLKNMNSVSYILPRLESVALAAADDRSKGVLVLG 116
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ + + S + + GV++G+ LA L +++GD+I +
Sbjct: 117 VDPEAEDRYSHISSKVSSGNFIDSDSNGVLLGEGLASYLKLNVGDEIILYGQGYRGHTAA 176
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
YTV G+ DN MVYM ++ Q ++ + V+ + D +
Sbjct: 177 GL-----YTVNGLLHFPVKALDNQMVYMPIKLTQELYSTGDQVTSWVLHTDSLDDVATVE 231
Query: 242 ENIVRILGNGVVVIDWQQR 260
+ + + V DWQ
Sbjct: 232 TKLKDHYQDQLKVRDWQDL 250
>gi|104782682|ref|YP_609180.1| efflux ABC transporter ATP-binding/permease [Pseudomonas
entomophila L48]
gi|123255450|sp|Q1I7I9|MACB2_PSEE4 RecName: Full=Macrolide export ATP-binding/permease protein MacB 2
gi|95111669|emb|CAK16390.1| putative efflux ABC transporter, ATP-binding/permease protein
[Pseudomonas entomophila L48]
Length = 654
Score = 45.9 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 31/252 (12%), Positives = 86/252 (34%), Gaps = 18/252 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +
Sbjct: 266 ALQAAWRVMWINR------FRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMAAFGSN 319
Query: 68 VVIQQKYYPLVDYQ------FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
++ + +P V+ V+P + GQ V +S +
Sbjct: 320 ILYLNGKRATAQEPGGIVTLDDVAAIGELPQVLHVMPVIGGQLMVRQGNSSQKFYVGGNN 379
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ + + + +++ +IG+ + + +P G +G
Sbjct: 380 TWFPAIFNWPVVEGTFFSEADEASGAAVAVIGQKVRSKMFGE------GSNPLGQYLLIG 433
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ + + + + A + + + + D + +T
Sbjct: 434 NVPFQVVGILAAKGASSGSEDSDERIVVPYSAASIRLFGSHDPEYVAIAAIDSRRVNETE 493
Query: 242 ENIVRILGNGVV 253
I R+L
Sbjct: 494 AAIDRLLRQRHQ 505
>gi|299136088|ref|ZP_07029272.1| protein of unknown function DUF214 [Acidobacterium sp. MP5ACTX8]
gi|298602212|gb|EFI58366.1| protein of unknown function DUF214 [Acidobacterium sp. MP5ACTX8]
Length = 415
Score = 45.9 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 33/290 (11%), Positives = 70/290 (24%), Gaps = 38/290 (13%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
V +A L +N+ S ++ +G++IGVM +I + SV+NG + V + +
Sbjct: 9 SVKMALDTLRANKLR------SGLTILGIVIGVMTVIAISSVINGLNSSVSGMVEAMGTN 62
Query: 68 VVIQQKYYPLVDYQFIAN----RLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
V+ ++ + +L F + A S +
Sbjct: 63 VLWVFRFPVIGVRPTTEMLARKQLTFDDEEAIAALPHVSSASASLRYQNFQFGAGSATAK 122
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
++N S + + + D+
Sbjct: 123 FRQRKVENVSLEGDTISSQAVYDWDIHEGRYFTQTDQDRATDVTVLGHDTAEDLFGNVDP 182
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSG-----------IEVFVK 232
I + F + + + F + +
Sbjct: 183 IGQEITVEGRTFTVVGTLDKQKQAFGGGKNPADSFAYFPITTFHKLHPEVLDYWLSAKFD 242
Query: 233 DPDAIEKTHENIVR-----------------ILGNGVVVIDWQQRYQIFF 265
D + I I G+ + W + F
Sbjct: 243 DQKNKPLVEDEIRDLLRRRRKVHNEAADNFAIFGSDAITRLWTEVTGSLF 292
>gi|222082529|ref|YP_002541894.1| hypothetical protein Arad_9207 [Agrobacterium radiobacter K84]
gi|221727208|gb|ACM30297.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 400
Score = 45.9 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 29/241 (12%), Positives = 64/241 (26%), Gaps = 10/241 (4%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
MS R + + L S R+ +IS++ S V V L+ +++ NGF+ +++
Sbjct: 1 MSTIVRQSLALTLSNLKSLRRRIWISLSLIFSVAMV---VTVLLGFLAMSNGFQTSLLQA 57
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + L + + ++V
Sbjct: 58 GSKDIAIALGKGAGTELGSRIEPSQLHYLDGITGIAVDAAGASVLSP-------EMVVPV 110
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
L ++ S R I + I + Y +
Sbjct: 111 EVPEKTDELLSTLSLRGIGPFGLSVRPNVRITRGRMFNPGASEIVVGRRLSLDYKGLEIG 170
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
S + + + + FN N + + + + P+A+
Sbjct: 171 EQLTFGTSKWTIVGIFDAGGSVFESEMLADIGVVRTLFNRPNLIQSVRIKLTTPEALPAL 230
Query: 241 H 241
Sbjct: 231 Q 231
>gi|261402440|ref|YP_003246664.1| protein of unknown function DUF214 [Methanocaldococcus vulcanius
M7]
gi|261369433|gb|ACX72182.1| protein of unknown function DUF214 [Methanocaldococcus vulcanius
M7]
Length = 367
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 32/242 (13%), Positives = 69/242 (28%), Gaps = 31/242 (12%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A R L N S ++ +G++IGV A I + ++ G + I LG +
Sbjct: 3 FELAKRNLKRNLLR------SVLALLGIIIGVAA-ISSLGILGGGLKQGIMENLGSISNY 55
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+I Y F ++ + + + V + +
Sbjct: 56 IIVFPNYQNGYTSFDKRDIEKLRVLNCKVIPVYATSDFVYIKGKNRKAYANIFGIDKNDI 115
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+L + + S DV
Sbjct: 116 K-----------------------YLNLKVKVSDTSVAVDTFFSNVNDVNVGDQLEIKNI 152
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN-AVSGIEVFVKDPDAIEKTHENIVRI 247
+ + + + ++ + + ++ N S I ++VK+ + I K +I
Sbjct: 153 SLRISGIYNSTFLFPDNSLILTAKTYRRFYGENNYNYSRIILYVKNIEDINKIKNETDKI 212
Query: 248 LG 249
L
Sbjct: 213 LN 214
>gi|199599365|ref|ZP_03212762.1| ABC-type antimicrobial peptide transport system, ATPase component
[Lactobacillus rhamnosus HN001]
gi|199589750|gb|EDY97859.1| ABC-type antimicrobial peptide transport system, ATPase component
[Lactobacillus rhamnosus HN001]
Length = 772
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 30/256 (11%), Positives = 69/256 (26%), Gaps = 13/256 (5%)
Query: 2 SIFSRFEVIVAWRYLFSNRKNAFIS-IASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+ + +++ + + + F++ AS I IG+ VV+++ +GF++ +
Sbjct: 240 KMSYLTALKLSFTNIMTKKGRTFLTAFASSIGIIGIA-------VVLALSSGFQKQIDNT 292
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
I + + A +
Sbjct: 293 QSETLAQFPITISSTAVNLTAGAEDNTKTSTFKTTKTVEAKQSASDKAQHTNKLNQKYID 352
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
N L N+ YG N G + + S + + S V P+
Sbjct: 353 YVNGISKRLTNNIGYTYGTGMNLLRNVNGTVKPVQFSTAKPTSNQTQRSFSSASSSVYPV 412
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI--- 237
++ + V + + + NA+ + VK+ I
Sbjct: 413 DREGKTSYLKKNYEVVAGSYPKSDNDVILIVD--RDNSTNINALKNLGFSVKNGQKIKFG 470
Query: 238 EKTHENIVRILGNGVV 253
+ + I +
Sbjct: 471 DIVGTKLKAIANDHYY 486
>gi|121602095|ref|YP_988435.1| macrolide-specific ABC-type efflux carrier MacB [Bartonella
bacilliformis KC583]
gi|120614272|gb|ABM44873.1| macrolide-specific ABC-type efflux carrier MacB [Bartonella
bacilliformis KC583]
Length = 668
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 28/244 (11%), Positives = 75/244 (30%), Gaps = 9/244 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++A + ++R F ++ +GV+IG+ +++ ++++ G ++ +++ G+ +
Sbjct: 276 AFMMALLAMNAHRMRTF------LTMLGVIIGIFSVVTMVALGTGTQQQLLETFKGMGTN 329
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + D Q D + +++ + NS
Sbjct: 330 TLTIMPGKDISDKQSGKITSLVEADAEALSQLPYVAGVTPQIAANSTVNYDSIEVNSMVM 389
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKD---LARNLGISIGDKINILSPYGDVTPMGMGI 184
+ F G + + L + + +
Sbjct: 390 GVGEQFFLTQGFKLVEGQIFDRQSVHDRAVDLVIEKEAIALLFPHSDESPIGKIVLVGRV 449
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
++ V+ + + +YM Q F V I + + D + E +
Sbjct: 450 PARIIGVVKPAQESHSVSNTIQIYMPYTALQTRFLGTTEVRAIMLKIADHVDTKLAEEAV 509
Query: 245 VRIL 248
R L
Sbjct: 510 ERFL 513
>gi|260772901|ref|ZP_05881817.1| macrolide export ATP-binding/permease protein macB [Vibrio
metschnikovii CIP 69.14]
gi|260612040|gb|EEX37243.1| macrolide export ATP-binding/permease protein macB [Vibrio
metschnikovii CIP 69.14]
Length = 654
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 21/224 (9%), Positives = 70/224 (31%), Gaps = 1/224 (0%)
Query: 26 SIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIAN 85
+ +F++ +G++IG+ +++ V+++ NG ++ +++ + + + + D +
Sbjct: 276 RLRTFLTMLGIIIGIASVVSVVALGNGSQKSILESIAAMGTNTIDIMPGSGFGDRRSGRI 335
Query: 86 RLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFD 145
R D + + ++S + + + F R G
Sbjct: 336 RTLTAEDAQALQSLPFIDSVTPTVNSSATIKFSNQSVTASIQGVGPDFFRVRGYELAKGQ 395
Query: 146 RGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMF-RMRFPDYDN 204
+ + + G + F + D
Sbjct: 396 YWDQTSVDNLAQEAVIDHNTLTALFADENPIGKVIFAGKLPIRIIGVTAAKESAFGNNDA 455
Query: 205 GMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+++ ++ ++ I + + D + + I+ +L
Sbjct: 456 LNIWVPYSTINARMMRQSHLNRITIRLDDNIPSDAAEQAIISLL 499
>gi|258508864|ref|YP_003171615.1| ABC transporter ATP-binding protein [Lactobacillus rhamnosus GG]
gi|257148791|emb|CAR87764.1| ABC transporter, ATP-binding protein [Lactobacillus rhamnosus GG]
gi|259650166|dbj|BAI42328.1| antimicrobial peptide ABC transporter ATP-binding and permease
components [Lactobacillus rhamnosus GG]
Length = 772
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 30/256 (11%), Positives = 69/256 (26%), Gaps = 13/256 (5%)
Query: 2 SIFSRFEVIVAWRYLFSNRKNAFIS-IASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+ + +++ + + + F++ AS I IG+ VV+++ +GF++ +
Sbjct: 240 KMSYLTALKLSFTNIMTKKGRTFLTAFASSIGIIGIA-------VVLALSSGFQKQIDNT 292
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
I + + A +
Sbjct: 293 QSETLAQFPITISSTAVNLTAGAEDNTKTSTFKTTKTVEAKQSASDKAQHTNKLNQKYID 352
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
N L N+ YG N G + + S + + S V P+
Sbjct: 353 YVNGISKRLTNNIGYTYGTGMNLLRNVNGTVKPVQFSTAKPTSNQTQRSFSSASSSVYPV 412
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI--- 237
++ + V + + + NA+ + VK+ I
Sbjct: 413 DREGKTSYLKKNYEVVAGSYPKSDNDVILIVD--RDNSTNINALKNLGFSVKNGQKIKFG 470
Query: 238 EKTHENIVRILGNGVV 253
+ + I +
Sbjct: 471 DIVGTKLKAIANDHYY 486
>gi|126662363|ref|ZP_01733362.1| ABC transporter, permease protein [Flavobacteria bacterium BAL38]
gi|126625742|gb|EAZ96431.1| ABC transporter, permease protein [Flavobacteria bacterium BAL38]
Length = 421
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 33/227 (14%), Positives = 75/227 (33%), Gaps = 4/227 (1%)
Query: 47 MSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFI--PDVIKVLPFVSGQA 104
++ G ++ + ++V NGH++I ++ P+ V QA
Sbjct: 55 VATGVGLQDKIREKVSAFNGHIIISNFDDNQSQVTTEPISINQSFYPNFKNVEGISHVQA 114
Query: 105 FVSGLSSGGSGVLVRGISNSDFSY-LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGIS 163
S + GI + Y + + ++ L
Sbjct: 115 VASKAGIIRTEKAFEGIIYKGVGKDYNFTNLEEYLVDGKIPNLKSELNTEVLISEYLAKR 174
Query: 164 IGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLEN 222
+ K+ + G +++ + G+F F ++D + ++ QL +
Sbjct: 175 LQLKVGDKFLTFFMKENGKLPNKRNFLITGIFNSGFQEFDAAYIIGDIRHVQLINKWQPS 234
Query: 223 AVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
V EVFV D I++ E + + + + +++Y F +
Sbjct: 235 EVGAFEVFVDDFSKIKEKGEEVYKEIPPTYNSVTIEEKYYSIFEWLK 281
>gi|305666174|ref|YP_003862461.1| ABC transporter permease [Maribacter sp. HTCC2170]
gi|88707672|gb|EAQ99913.1| ABC transporter, permease protein [Maribacter sp. HTCC2170]
Length = 784
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 31/254 (12%), Positives = 73/254 (28%), Gaps = 20/254 (7%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGV--MALIVV-----MSVMNGFRE 55
+F + + +AWR L+ N+ + S ++ G+ IG+ +LI++ +S + F +
Sbjct: 1 MFRNY-LKIAWRNLWKNK------VYSALNIFGLAIGITCASLILLWVEDELSFDSTFEK 53
Query: 56 DMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSG 115
L N + + +A L I ++ + +
Sbjct: 54 QDQVYYLPTNQQYEGEWSTFFQATPGPLAKVLKDEIPEIIGSARTKQESLLFEVGENSIS 113
Query: 116 VLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYG 175
R SF + + G + +
Sbjct: 114 KYGRFADPDFLKMFSLSFVEGNLENAFNDYNGIVISKKAATHLYGENESALGKVVQVNND 173
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD 235
+ V +F P + + +E + + + + +E +
Sbjct: 174 TNYTITGVFEDLPTNVTYVFDWVAPFER----FSAGKEWMKEYGNKFSDTFVE--LSSEA 227
Query: 236 AIEKTHENIVRILG 249
E + + +IL
Sbjct: 228 DFESVNSKVKKILP 241
>gi|207093004|ref|ZP_03240791.1| lipoprotein release system transmembrane protein [Helicobacter
pylori HPKX_438_AG0C1]
Length = 45
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVV 46
+ RYL ++ FISI + ++F GV +GVM LIV
Sbjct: 4 RSLIFFLIKRYLRFDKSQPFISITALLAFFGVAVGVMVLIVA 45
>gi|123441146|ref|YP_001005134.1| ABC transporter, ATP-binding component [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|122088107|emb|CAL10895.1| ABC transporter, ATP-binding component [Yersinia enterocolitica
subsp. enterocolitica 8081]
Length = 658
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 29/267 (10%), Positives = 80/267 (29%), Gaps = 15/267 (5%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +R AF +S +G++IG+ +++ M+V G R++++ + +
Sbjct: 269 AIKMAWRALLGHRIRAF------LSMLGIIIGISSVVSSMAVGEGARQEILNEISQLGTS 322
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + + R D+ + + +S + V S
Sbjct: 323 NLDIRPGLGWDKPRPDFERALSQADIELLSQQPYVDSLSPVVSKMVAAVRGDKQVMVSLS 382
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ + F + G + D + + + + +
Sbjct: 383 GVSHGFFQVKGLNFSVGDGFTPSHVTAREPVVILQPELSDTLFAAGQNPLGEIVQLDGIP 442
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ R +M + + + I V V++ + ++ ++
Sbjct: 443 LRVIGVAKRGGSSFGGLLAAWMPYTSLTERISGDIPLESITVRVREGYNLNNVQRDVEKL 502
Query: 248 LGN-----GVVVIDWQQRYQIFFSCYE 269
L + ++ +
Sbjct: 503 LESAHGQRDFFILS----NDQMSKAIQ 525
>gi|253687169|ref|YP_003016359.1| ABC transporter related [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251753747|gb|ACT11823.1| ABC transporter related [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 650
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 28/251 (11%), Positives = 77/251 (30%), Gaps = 8/251 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + + R F ++ +G++IG+ +++ V+++ G +E ++ + +
Sbjct: 259 AFKMALLAMNAQRMRTF------LTMLGIIIGIASVVSVVALGKGSQEQVLADINSMGTS 312
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D A + D+ + + +S+ + ++ S
Sbjct: 313 TLEIFPGKDFGDMDASAIQTLRASDIQPLTQQPYVHSVTPSISTSVTMRYGNIAVSASVS 372
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ F G + + + + +
Sbjct: 373 GVGEQFFTVRGYTLQRGVLFPRSSVDELAQDAVIDKNTLNKLFPHGEDPIGQVILLGSLP 432
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ V+ + F +N V++ ++ + I V VKD + ++I
Sbjct: 433 VRIIGVVSKNQGGFGSDENLNVWVPYTTVMKRMVGQSYLKSITVRVKDNIDMNVAEKSIT 492
Query: 246 RILGNGVVVID 256
+L D
Sbjct: 493 ALLTQRHGTKD 503
>gi|326336435|ref|ZP_08202605.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325691308|gb|EGD33277.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 406
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 31/255 (12%), Positives = 76/255 (29%), Gaps = 17/255 (6%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+AWR + N+ + ++ +G++IGV ++I ++++ G ++ + + + + ++
Sbjct: 7 FRIAWRAILLNKTR------TLLTMLGIIIGVGSVITMLAIGEGSKKSIKESISKMGTNM 60
Query: 69 VIQQK---------YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
+ + + + K+L +++ +G S G+
Sbjct: 61 LNIRPGAGRFGGVRMSMSEMQSLKMTDYLALKNEAKLLKYITPVVSGNGQSIAGANNWPT 120
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
I + YL D + K I + SP G
Sbjct: 121 SIYGVNPEYLSIREWSVAEGAMFGQDEIDN--LSKVAIIGKTIQKNLFPDGDSPIGQTIR 178
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+ F + ++ Q + + I V + E
Sbjct: 179 FKNIPFKIIGILTPKGESNFGQDQDDIIIAPYTTVQKRVLAQTYLQSIVASVINESESEN 238
Query: 240 THENIVRILGNGVVV 254
+ IL +
Sbjct: 239 AVNEVKTILERTHNI 253
>gi|308069106|ref|YP_003870711.1| ABC-type antimicrobial peptide transport system, permease component
[Paenibacillus polymyxa E681]
gi|305858385|gb|ADM70173.1| ABC-type antimicrobial peptide transport system, permease component
[Paenibacillus polymyxa E681]
Length = 404
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 26/229 (11%), Positives = 72/229 (31%), Gaps = 13/229 (5%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQF------ 82
SF++ +G++IGV A+I +M++ NG + + + +V++ +VD +
Sbjct: 21 SFLTILGIIIGVAAVIAIMAIGNGSTARIKAEINKLGNNVLMVAPAMTMVDGEIDLDNTP 80
Query: 83 ---IANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGN 139
A+ + + + +++ F ++ +
Sbjct: 81 SFTWADVEALEQKNSIAALMPNISSNSKAAWGRYNYNATIVGTSTSFYKVKKFS---FAE 137
Query: 140 VSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRF 199
+ + + + + + + G + +
Sbjct: 138 GRTFTNDEMDKRMNVAILESQAVQRLFGGDTQNVLGRTFQIKQIPFKVIGVLNTQPVTNL 197
Query: 200 PDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
N +Y+ N ++G++V K P + + +I+ L
Sbjct: 198 SYSTNEQIYIPATTMINRLGEAN-ITGLDVSAKSPALMNQARLDILESL 245
>gi|192359578|ref|YP_001982993.1| macrolide ABC efflux protein [Cellvibrio japonicus Ueda107]
gi|190685743|gb|ACE83421.1| macrolide ABC efflux protein [Cellvibrio japonicus Ueda107]
Length = 644
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 33/248 (13%), Positives = 82/248 (33%), Gaps = 7/248 (2%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AWR L N + ++ +G++IGV ++I ++++ +G ++ ++ + + ++++
Sbjct: 260 AWRSLHHN------LFRTALTLLGIVIGVASVITMLAIGDGAKKSVVDSISSMGSNLLLV 313
Query: 72 QKYYPLVDYQ-FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
P + IA + + I+ L ++ S + + +
Sbjct: 314 LPGGPNQRGRGDIATLIPEDVEAIRQLDHIAAALPEVNGSYTLRYSNLDHSTEVSATASG 373
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
+R + F +A SP G+ + +
Sbjct: 374 FPMARKWPLAEGTFFTEDDEKNYATVAVLGKTVATKLFGERSPLGEYLIINNVLFQVIGV 433
Query: 191 VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN 250
+ + V++ L ++ I + V D I + ++L
Sbjct: 434 MSERGADPGGRDQDDKVFVPYTTGSLRIIGTRSLRNITISVDGEDNIATVESQVKQLLLG 493
Query: 251 GVVVIDWQ 258
V D+Q
Sbjct: 494 RHGVEDFQ 501
>gi|258540042|ref|YP_003174541.1| ABC transporter ATPase [Lactobacillus rhamnosus Lc 705]
gi|257151718|emb|CAR90690.1| ABC transporter, ATPase component [Lactobacillus rhamnosus Lc 705]
Length = 772
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 30/256 (11%), Positives = 69/256 (26%), Gaps = 13/256 (5%)
Query: 2 SIFSRFEVIVAWRYLFSNRKNAFIS-IASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+ + +++ + + + F++ AS I IG+ VV+++ +GF++ +
Sbjct: 240 KMSYLTALKLSFTNIMTKKGRTFLTAFASSIGIIGIA-------VVLALSSGFQKQIDNT 292
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
I + + A +
Sbjct: 293 QSETLAQFPITISSTAVNLTAGAEDNTKTSTFKTTKTVEAKQSASDKAQHTNKLNQKYID 352
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
N L N+ YG N G + + S + + S V P+
Sbjct: 353 YVNGISKRLTNNIGYTYGTGMNLLRNVNGTVKPVQFSTAKPTSNQAQRSFSSASSSVYPV 412
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI--- 237
++ + V + + + NA+ + VK+ I
Sbjct: 413 DREGKTSYLKKNYEVVAGSYPKSDNDVILIVD--RDNSTNINALKNLGFSVKNGQKIKFG 470
Query: 238 EKTHENIVRILGNGVV 253
+ + I +
Sbjct: 471 DIVGTKLKAIANDHYY 486
>gi|171911889|ref|ZP_02927359.1| hypothetical protein VspiD_11955 [Verrucomicrobium spinosum DSM
4136]
Length = 404
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 81/270 (30%), Gaps = 13/270 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F +++A R + N AF ++ +GV+IGV A+I ++++ G + + ++
Sbjct: 1 MFFN-ALLIALREIRRNLTRAF------LTVLGVIIGVAAVITMVTLGQGTTQAVKNQIS 53
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ ++++ + A F + + + S + +
Sbjct: 54 SLGSNLLVLRPGSGFGPRSTSAGVPRFTMLDAQAVMEQVSGVAAVAPVAQTSLSTIYLQT 113
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKD----LARNLGISIGDKINILSPYGDVT 178
++ F+ + + + +P G
Sbjct: 114 ARTTQITGSTPDYFHIGKWTIGEGRLFTDLDLRSGAAVCVIGETVRRQLFGSENPIGAKI 173
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN--AVSGIEVFVKDPDA 236
+G + + D D+ +V + + +V+ I + +D
Sbjct: 174 RIGKSSCEVIGLLTAKGQSGMGDQDDTIVVPLSTLQRRLTGRTSARSVNQINISAEDNTN 233
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFS 266
+ I ++ + + F
Sbjct: 234 SDAMIGEITSLMRQRRNLSPNEDDNFSVFD 263
>gi|218677230|ref|YP_002396049.1| ABC transporter: Transmembrane protein [Vibrio splendidus LGP32]
gi|218325498|emb|CAV27678.1| ABC transporter: Transmembrane protein [Vibrio splendidus LGP32]
Length = 432
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 49/287 (17%), Positives = 80/287 (27%), Gaps = 31/287 (10%)
Query: 1 MSIFS-RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
MS F V +AW L N + S +S + + I V AL E + +
Sbjct: 8 MSTFLLPTSVRLAWLNLLRNGRR------SLLSVLIIAIAVFALTSAGGYGLYTYESLRE 61
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANR-----------LDFIPDVIKVLPFVSGQAFVSG 108
GH+ + Y D + + DV V P V VS
Sbjct: 62 STARDTGHLTLSTPGYFEQDEDMPLSNGLDNVQTLTKSIIGDSDVRGVQPRVYFSGLVSN 121
Query: 109 LSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKI 168
S + R +S+ + +
Sbjct: 122 GSKSTIFMGTGVNEREFDMKGPFLDVRSGQTLSDVKSPRYDSQEPQVMLGTDLARNLKVA 181
Query: 169 NILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIE 228
T + + + V G++ P+ D +Y+ + AQ + VS +
Sbjct: 182 VGDWVTLLATTSDGALNAFDFKVQGIYSTGVPELDKRQLYVHITTAQELL-ASDKVSTLS 240
Query: 229 VFVKDPDAIEKTHENIVRIL----------GNGVVVIDWQQRYQIFF 265
VF+ + + I L G + WQ R FF
Sbjct: 241 VFLFETSKTSTVQQRIQATLARNSASQSDQGIETEITPWQDR--AFF 285
>gi|307261086|ref|ZP_07542765.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306869218|gb|EFN01016.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 640
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 22/241 (9%), Positives = 77/241 (31%), Gaps = 7/241 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + +++ + ++ +G++IG+ ++I V+++ G ++ ++ + + +
Sbjct: 252 SFKMAINAITAHKLR------ALLTMLGIVIGITSVISVVALGQGSQQQILSNINSLGTN 305
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + + I D + + + + G+ + + +
Sbjct: 306 TMTIMNGTGFGDRRANLTKNLTISDAMMLNKQQFVDSTTPSSNLSGTVIYGNTNVTASIN 365
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ F G + + K ++ + + +
Sbjct: 366 GVGEQFVNVKGLKMISGRFFDADEVKLSSQVVVIDGNTKK-DLGLTDPVEGKVILVDKKP 424
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ + + ++M + E + + V VKD + ++I +
Sbjct: 425 LTVIGMAQESNNLNQTSLKMWMPYTTLMQRISGEKFIDSLTVKVKDNVESQTAEKSINEL 484
Query: 248 L 248
L
Sbjct: 485 L 485
>gi|225851019|ref|YP_002731253.1| macrolide export ATP-binding/permease protein MacB [Persephonella
marina EX-H1]
gi|225645041|gb|ACO03227.1| macrolide export ATP-binding/permease protein MacB [Persephonella
marina EX-H1]
Length = 407
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 27/247 (10%), Positives = 68/247 (27%), Gaps = 13/247 (5%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ V R ++ S +S +G+ G ALI ++SV G +E + + +
Sbjct: 8 IKVILRIFREHKLR------SALSVLGIAFGAFALITMISVSEGMKEKNRREIEKFGKNP 61
Query: 69 -------VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
V ++ +L + + +P++ + +
Sbjct: 62 VIVKSGKVFVRRGRQRAITTSTTLKLREVQIIKHQIPYIKKAIPAYMIDYPVRNKGITVF 121
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ + ++ R F + P G +
Sbjct: 122 TTIVGTKIEYLKYRNLTVKRGRFFNRNEEKSAAKVVVLGSKIAEKFFGNEDPVGKNILIF 181
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ + ++Y L+ A + ++ I + V + I
Sbjct: 182 RVPCKVIGVLEEKGVDLAGVDQDLLIYTPLKTAMRRLANVDYINTIYIEVDRQENIPFVK 241
Query: 242 ENIVRIL 248
++ +L
Sbjct: 242 SQLISLL 248
>gi|229581995|ref|YP_002840394.1| protein of unknown function DUF214 [Sulfolobus islandicus
Y.N.15.51]
gi|228012711|gb|ACP48472.1| protein of unknown function DUF214 [Sulfolobus islandicus
Y.N.15.51]
Length = 413
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 39/260 (15%), Positives = 91/260 (35%), Gaps = 16/260 (6%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++F + ++++ L S + I + ++ I V+IGV ++ +++ G + ++
Sbjct: 1 MNLFD--ILWLSYKGLISRK------IIAILAIISVVIGVASVTTLVAFTQGVGQSILSE 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
V + ++ + Q ++ +P V V VSG ++ ++
Sbjct: 53 VESLGPKTILILPSRGSLLTQATVATIESLPGVEAVYGVVSGFGTINVEGQPIDVTIIGV 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ S S + G + +A ++ S P
Sbjct: 113 NNLSAILGQVLLESGSTYPPITSPEAVIGSEVANPVAGVY-------FSVGSEISIQIPR 165
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G + + +L +++ L EA N + + + + V + + +
Sbjct: 166 GNSVNLEVVGILSPSGANPLSNSETSIFIPLGEAMAILN-KTSYNELIVEAQSVNDVNTI 224
Query: 241 HENIVRILGNGVVVIDWQQR 260
I I GN + V+ QQ
Sbjct: 225 ATIIEDIYGNQLNVVTVQQL 244
>gi|303249655|ref|ZP_07335860.1| putative macrolide-specific ABC-type efflux carrier [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307252180|ref|ZP_07534078.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|302651467|gb|EFL81618.1| putative macrolide-specific ABC-type efflux carrier [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306860324|gb|EFM92339.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
Length = 640
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 22/241 (9%), Positives = 77/241 (31%), Gaps = 7/241 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + +++ + ++ +G++IG+ ++I V+++ G ++ ++ + + +
Sbjct: 252 SFKMAINAITAHKLR------ALLTMLGIVIGITSVISVVALGQGSQQQILSNINSLGTN 305
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + + I D + + + + G+ + + +
Sbjct: 306 TMTIMNGTGFGDRRANLTKNLTISDAMMLNKQQFVDSTTPSSNLSGTVIYGNTNVTASIN 365
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ F G + + K ++ + + +
Sbjct: 366 GVGEQFVNVKGLKMISGRFFDADEVKLSSQVVVIDGNTKK-DLGLTDPVEGKVILVDKKP 424
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ + + ++M + E + + V VKD + ++I +
Sbjct: 425 LTVIGMAQESNNLNQTSLKMWMPYTTLMQRISGEKFIDSLTVKVKDNVESQTAEKSINEL 484
Query: 248 L 248
L
Sbjct: 485 L 485
>gi|227830422|ref|YP_002832202.1| protein of unknown function DUF214 [Sulfolobus islandicus L.S.2.15]
gi|227456870|gb|ACP35557.1| protein of unknown function DUF214 [Sulfolobus islandicus L.S.2.15]
Length = 420
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 37/260 (14%), Positives = 88/260 (33%), Gaps = 16/260 (6%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++F + ++++ L S + I + ++ I V+IGV ++ +++ G + ++
Sbjct: 1 MNLFD--ILWLSYKGLISRK------IIAILAIISVVIGVASVTTLVAFTQGVGQSILSV 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
V + ++ + Q ++ +P V V VSG ++ ++
Sbjct: 53 VESLGPKTILIIPSRGSLLTQATVATIESLPGVEAVYGVVSGFGTINVEGQPIDVTIIGI 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ S S + G + + + S
Sbjct: 113 NNLSAILGQVLLESGSTYPPITSPEAVIGSEVANPVPGVY-------FPVGSEITIQISR 165
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G + + +L +++ L EA N + + + + V + + +
Sbjct: 166 GNSVNLEVVGILSPSGANPLSNSETSIFIPLGEAMAILN-KTSYNELIVEAQSVNDVNTI 224
Query: 241 HENIVRILGNGVVVIDWQQR 260
I I GN + V+ QQ
Sbjct: 225 ATIIEDIYGNQLNVVTVQQL 244
>gi|148654449|ref|YP_001274654.1| hypothetical protein RoseRS_0269 [Roseiflexus sp. RS-1]
gi|148566559|gb|ABQ88704.1| protein of unknown function DUF214 [Roseiflexus sp. RS-1]
Length = 414
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+F ++ A L +N+ S ++ +G++IG L+ V+S+ N + + +R
Sbjct: 1 MFKELALM-AIDSLRANK------FRSLLTMLGIIIGSATLVAVLSLGNALQSQVFERF 52
>gi|302877646|ref|YP_003846210.1| hypothetical protein Galf_0402 [Gallionella capsiferriformans ES-2]
gi|302580435|gb|ADL54446.1| protein of unknown function DUF214 [Gallionella capsiferriformans
ES-2]
Length = 375
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 31/259 (11%), Positives = 69/259 (26%), Gaps = 30/259 (11%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++F A L+ S ++ + +G+ A++ + S+ GF K
Sbjct: 1 MNLFR-----FALDNLYRRPAR------SGLTVSAISLGIAAVVALTSIAWGFEASWQKA 49
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+++ + L+
Sbjct: 50 NDARGTDLIVTRIASQNSMPSPFLAAKVQDALARLPHVKEVVGLLSEMLTVSEEAPPAFV 109
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
SYL + G D D + +L + K +
Sbjct: 110 FGWVYGSYLWDHLRLIDGRWPADSDE------AVVMVGSLASEMLHKKTGDQVEIEGQVF 163
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK---DPDAI 237
+ +S V+ +NG V M+L AQ + V+ + + + +
Sbjct: 164 KVAGIFESSAVV----------ENGAVIMTLNRAQALTDKPGKVNFLNIKLDAGASEADL 213
Query: 238 EKTHENIVRILGNGVVVID 256
E + + + + +
Sbjct: 214 ASIKEQVKKTMPGFLAITS 232
>gi|170729166|ref|YP_001763192.1| hypothetical protein Swoo_4848 [Shewanella woodyi ATCC 51908]
gi|169814513|gb|ACA89097.1| protein of unknown function DUF214 [Shewanella woodyi ATCC 51908]
Length = 413
Score = 45.9 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 31/247 (12%), Positives = 80/247 (32%), Gaps = 9/247 (3%)
Query: 26 SIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIAN 85
S S ++ +G++IGV A+I V+S+M G + + ++ + +V + +
Sbjct: 24 SFRSALTTLGIIIGVAAVITVVSIMEGLSQGVGNQLKDLGSDMVTIKAHTNTELEMLGVT 83
Query: 86 RLDFIPDVIKVLPFVSGQAFVSGLSSGGSG----VLVRGISNSDFSYLQNSFSRFYGNVS 141
D + + V G ++ S + +++ ++ +
Sbjct: 84 NQLTYDDYLLIKSKVPGIKEIAAKMRAFSFGSEARFGQYSTHTQVIGTESDYQNVVNIFP 143
Query: 142 NDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPD 201
+ K S K L + + +G + R
Sbjct: 144 LEGRFLSNTDDIKRRRVVFVGSSVLKKLNLPQHPVGEFILLGGEWFKVIGVAETRGSLFG 203
Query: 202 YDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE--KTHENIVRILGNGVVVIDWQQ 259
+D ++ N + + I++ + ++ +E + +L + + +
Sbjct: 204 FDQDNYIIAPFSTIRSLNGSDRTNNIDIVFRPEAGVDLTLLNERVRNLLRSKYRL---TE 260
Query: 260 RYQIFFS 266
+ Q FF
Sbjct: 261 QDQDFFE 267
>gi|298674626|ref|YP_003726376.1| hypothetical protein Metev_0675 [Methanohalobium evestigatum
Z-7303]
gi|298287614|gb|ADI73580.1| protein of unknown function DUF214 [Methanohalobium evestigatum
Z-7303]
Length = 405
Score = 45.5 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 33/259 (12%), Positives = 82/259 (31%), Gaps = 11/259 (4%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV---LGING 66
+A++ +F ++ ++ A I + + +++ S+++G + +++ +
Sbjct: 15 FLAYKNIFKSK----VTFAVIILVLAMSF--LSVTFFASIIDGLGYEFEEKMISGSTGHL 68
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
V + + +A ++ IP V+ + + G I +
Sbjct: 69 MVEPGDDETYITGSKELARDINRIPGVVGTARRLQTTSVAEHEDINL-GTQTIFIEPAYE 127
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ N + K V+IG +L + + + GD +
Sbjct: 128 KSVSNYHLSIVEGSYLTDNSDKEVLIGANLVESYADEDDTRKRLDVEVGDELSLSFRNGV 187
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLENAVSGIEVFVKDPDAIEKTHENIV 245
+ + + + + + F + NA I V + D ++ I
Sbjct: 188 VKKYEVIGVYETGFRFVDEQLILDYDQYFTIFPGVSNAADKILVRLPDRESTAFYKNKIK 247
Query: 246 RILGNGVVVIDWQQRYQIF 264
LG V WQ +
Sbjct: 248 YDLGVSEQVNPWQTKMGTI 266
>gi|229552664|ref|ZP_04441389.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Lactobacillus rhamnosus LMS2-1]
gi|229313965|gb|EEN79938.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Lactobacillus rhamnosus LMS2-1]
Length = 798
Score = 45.5 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 30/256 (11%), Positives = 69/256 (26%), Gaps = 13/256 (5%)
Query: 2 SIFSRFEVIVAWRYLFSNRKNAFIS-IASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+ + +++ + + + F++ AS I IG+ VV+++ +GF++ +
Sbjct: 266 KMSYLTALKLSFTNIMTKKGRTFLTAFASSIGIIGIA-------VVLALSSGFQKQIDNT 318
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
I + + A +
Sbjct: 319 QSETLAQFPITISSTAVNLTAGAEDNTKTSTFKTTKTVEAKQSASDKAQHTNKLNQKYID 378
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
N L N+ YG N G + + S + + S V P+
Sbjct: 379 YVNGISKRLTNNIGYTYGTGMNLLRNVNGTVKPVQFSTAKPTSNQAQRSFSSASSSVYPV 438
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI--- 237
++ + V + + + NA+ + VK+ I
Sbjct: 439 DREGKTSYLKKNYEVVAGSYPKSDNDVILIVD--RDNSTNINALKNLGFSVKNGQKIKFG 496
Query: 238 EKTHENIVRILGNGVV 253
+ + I +
Sbjct: 497 DIVGTKLKAIANDHYY 512
>gi|226939156|ref|YP_002794227.1| ABC transporter, ATP-binding/permease protein [Laribacter
hongkongensis HLHK9]
gi|226714080|gb|ACO73218.1| ABC transporter, ATP-binding/permease protein [Laribacter
hongkongensis HLHK9]
Length = 652
Score = 45.5 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 25/256 (9%), Positives = 86/256 (33%), Gaps = 7/256 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++A R + ++R +F ++ +G++IG+ +++ V+++ G R+ ++ + + +
Sbjct: 262 AFVMAGRAMLAHRLRSF------LTMLGIIIGIASVVSVVALGEGSRQQILSDISAMGTN 315
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + A D + + G+S+ + +
Sbjct: 316 TIDIYPGKGFGDRKSSAIHTLNDRDAAALAEQGFVDSVTPGVSTSATLRVGNTALTGQVR 375
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGI-SIGDKINILSPYGDVTPMGMGIRS 186
+ + + G + + + + + K+ + +
Sbjct: 376 GVGQQYFQVKGVRLAEGQAFNAEAVTRYAQEVVIDPNTRQKLFGSGNALGEVILVNNLPV 435
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ V + F + + +++ A + ++ I V + D + + +V+
Sbjct: 436 RVIGVTEEQKSVFGNSETLNLWIPYTTAMGRLLGRDYLNSITVRISDSISTQAAETALVK 495
Query: 247 ILGNGVVVIDWQQRYQ 262
++ D+
Sbjct: 496 LMTQRHGTRDFFVMNS 511
>gi|307263268|ref|ZP_07544886.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|306871330|gb|EFN03056.1| Macrolide export ATP-binding/permease protein macB [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 640
Score = 45.5 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 22/241 (9%), Positives = 77/241 (31%), Gaps = 7/241 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + +++ + ++ +G++IG+ ++I V+++ G ++ ++ + + +
Sbjct: 252 SFKMAINAITAHKLR------ALLTMLGIVIGITSVISVVALGQGSQQQILSNINSLGTN 305
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + + I D + + + + G+ + + +
Sbjct: 306 TMTIMNGTGFGDRRANLTKNLTISDAMMLNKQQFVDSTTPSSNLSGTVIYGNTNVTASIN 365
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ F G + + K ++ + + +
Sbjct: 366 GVGEQFVNVKGLKMISGRFFDADEVKLSSQVVVIDGNTKK-DLGLTDPVEGKVILVDKKP 424
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ + + ++M + E + + V VKD + ++I +
Sbjct: 425 LTVIGMAQESNNLNQTSLKMWMPYTTLMQRISGEKFIDSLTVKVKDNVESQTAEKSINEL 484
Query: 248 L 248
L
Sbjct: 485 L 485
>gi|218960430|ref|YP_001740205.1| ABC-type transport systems, involved in lipoprotein release,
permease components [Candidatus Cloacamonas
acidaminovorans]
gi|167729087|emb|CAO79998.1| ABC-type transport systems, involved in lipoprotein release,
permease components [Candidatus Cloacamonas
acidaminovorans]
Length = 405
Score = 45.5 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 26/256 (10%), Positives = 82/256 (32%), Gaps = 14/256 (5%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH- 67
+ +A++ L N+ F ++ +G++IGV A+I ++++ G ++ + ++ + +
Sbjct: 7 IRIAFKSLARNKTRTF------LTMLGIIIGVAAVITMLAIGQGAKKIVEDQISSMGTNV 60
Query: 68 -VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
+V + + A + + + S ++ S +
Sbjct: 61 LMVTVNFTRSSTNVRQAAGSGSLLELDDVFAIRSQVEDALYVSPVYNSFAQLKFESQNWR 120
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGK-----DLARNLGISIGDKINILSPYGDVTPMG 181
+ + + ++ + + ++G+ + + + P G + +
Sbjct: 121 TGVMGVDTDYFYIRNMNPEQGELFYDSDVENGTKVCVIGKTVAENLFGDIDPVGQIIRIR 180
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQE-AQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ + + + V+ I V D I K
Sbjct: 181 NIPFTVKGVMESKGQNVMGADQDDSVWAPYTTVYTRLLGRRWRNMMIIVSAVSKDKIAKV 240
Query: 241 HENIVRILGNGVVVID 256
++I+ +L +
Sbjct: 241 QQDILDLLQSRHRGTT 256
>gi|223039903|ref|ZP_03610186.1| macrolide export ATP-binding/permease protein MacB [Campylobacter
rectus RM3267]
gi|222878771|gb|EEF13869.1| macrolide export ATP-binding/permease protein MacB [Campylobacter
rectus RM3267]
Length = 640
Score = 45.5 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 26/255 (10%), Positives = 73/255 (28%), Gaps = 7/255 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++ +FS++ S ++ +G++IG+ ++I V+++ NG + ++ + GI +
Sbjct: 252 SFKMSVNAIFSHKLR------SLLTMLGIIIGITSVISVVALGNGSQRQILSSIRGIGTN 305
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + + I D + + + ++ G+ +++
Sbjct: 306 TIDIYPGKGFGDMRAGRIKTLSISDAVMLSRQDYLDSVTPNSTTIGTLTFANKSASATLR 365
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ G+ + + + + R
Sbjct: 366 GGGSQSLEVLGHKIKSGRVFSEEEVKDSASVIVIDHNTKNEFFPDTDPLDKTILFNKRPF 425
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ + ++ I VKD + ++ I
Sbjct: 426 KIIGVLAKNDLMDTSMLRTYTTYTAVINKITG-DRHITSITAKVKDEVNAQIAERSLTEI 484
Query: 248 LGNGVVVIDWQQRYQ 262
L D+ R
Sbjct: 485 LTLKHGARDFFTRNS 499
>gi|300765658|ref|ZP_07075636.1| ABC transporter [Listeria monocytogenes FSL N1-017]
gi|300513646|gb|EFK40715.1| ABC transporter [Listeria monocytogenes FSL N1-017]
Length = 392
Score = 45.5 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 31/268 (11%), Positives = 86/268 (32%), Gaps = 20/268 (7%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ + +A + L S + F ++ +G++IGV ++ +++S+ +++ +
Sbjct: 5 MTLLQ--SIKLALKQLLSTKFRTF------LTMLGIIIGVFSVTLLVSIGEAISKNVSTQ 56
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + +++ Y + +F + + ++ Q S + V G
Sbjct: 57 LGDMGSNLLTVNFYSDNPNDKFTYKDAKKLLNEDEIGSPEVIQTKEVRTSEKTASNQVAG 116
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
I+ S + + D G+ V I + I M
Sbjct: 117 INEYYASIKNLELASGRFCSNVDVIYGQKVTIIGSEIAKTYFKEQNPIGEYLQIAGARYM 176
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK- 239
+G+ + + +++ + A+ F + V + K + +
Sbjct: 177 VIGVLKEKGES-------LFGSADKKLFIPISSAERLF-KTDTVDLYYIQTKKVEQVPAA 228
Query: 240 ---THENIVRILGNGVVVIDWQQRYQIF 264
+ + + N + Q
Sbjct: 229 VKVVKKKMSQFFPNNEDAYTVANQQQAL 256
>gi|51892946|ref|YP_075637.1| ABC transporter permease protein [Symbiobacterium thermophilum IAM
14863]
gi|51856635|dbj|BAD40793.1| ABC transporter permease protein [Symbiobacterium thermophilum IAM
14863]
Length = 402
Score = 45.5 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 39/278 (14%), Positives = 84/278 (30%), Gaps = 23/278 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDM-IK 59
M++ F VA L++N+ S ++ +G++IGV ++I ++++ G ++ + +
Sbjct: 1 MNLLETFS--VALSALWANKLR------SALTMLGLIIGVGSVIAIIAIGRGTQKAVAAE 52
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
G + D Q A F D I +L + + G SG +
Sbjct: 53 LDALNGGVFQLMATPGWSEDGQPTARLRMFRDDDIALLKEALPEIDLIDPQVGMSGRITF 112
Query: 120 GISNSDFSYLQ--------NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL 171
G + +++ + + L+ + I +
Sbjct: 113 GREVEWWDWIRGAGADTAALMNIQLSAGRWFTEEEIARGDRVMVLSASRVEYILGEGVNP 172
Query: 172 SPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFV 231
+ + G Y+ +N+ + V V
Sbjct: 173 LGIELMVNGYPFQIIGVIAPNTGMLSQLLGGQGGDFYVPRSYITRVTG-QNSYDHLTVRV 231
Query: 232 K---DPDAIEKTHENIVRIL--GNGVVVIDWQQRYQIF 264
+ DP ++ ++ L G G W F
Sbjct: 232 RDGYDPVEVKDLAVRVMERLYPGTGYEAYIWTDFMGEF 269
>gi|116623194|ref|YP_825350.1| hypothetical protein Acid_4101 [Candidatus Solibacter usitatus
Ellin6076]
gi|116226356|gb|ABJ85065.1| protein of unknown function DUF214 [Candidatus Solibacter usitatus
Ellin6076]
Length = 414
Score = 45.5 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 34/269 (12%), Positives = 86/269 (31%), Gaps = 27/269 (10%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFRED---- 56
M IFS VA L + + + ++ +G++ GV ++I ++++ +G RE+
Sbjct: 1 MIIFSDLGQAVA--NLRAQKTR------TLLTALGIVFGVGSVIGMLAIGSGAREESLRF 52
Query: 57 ----------MIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFV 106
+ R +++ P + + + + + + S
Sbjct: 53 IEQLGVRNVLIESRPATSQEEFQQRRRSSPGLSARDVRILRANVEALETLSARRSMHPAR 112
Query: 107 SGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGD 166
+ G+ S + D V + + A+ I G
Sbjct: 113 VLPKPSRDIPELYGVEPSYSVIHSLHLAEGKFFDEADDAASATVCVLGEGAKVNLIGYGS 172
Query: 167 KINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFN-----LE 221
+ D +G+ + N ++Y+ L Q F ++
Sbjct: 173 ALGKFVKVNDSWMEVVGVLQEQVMAGAQNSGASMLDVNNIIYIPLNAMQYRFWDQGSNMK 232
Query: 222 NAVSGIEVFVKDPDAIEKTHENIVRILGN 250
+ + GI++ ++ + + + +L +
Sbjct: 233 DELDGIDIRLRADADSIEVAKVVTAVLNS 261
>gi|331004075|ref|ZP_08327557.1| hypothetical protein HMPREF0491_02419 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330411661|gb|EGG91069.1| hypothetical protein HMPREF0491_02419 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 392
Score = 45.5 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + + +N+ +F ++ +G++IGV A+++++SVM G+ +MIK + + +
Sbjct: 4 SFKLAIKSIIANKMRSF------LTMLGLIIGVSAVVILVSVMMGYMNNMIKSFMDMGAN 57
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQ 103
+ + DF + V ++ Q
Sbjct: 58 TITVNLVNMPSRQASVDQMYDFFNEHRDVFSEMTPQ 93
>gi|284175245|ref|ZP_06389214.1| hypothetical protein Ssol98_11445 [Sulfolobus solfataricus 98/2]
Length = 414
Score = 45.5 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 37/260 (14%), Positives = 89/260 (34%), Gaps = 16/260 (6%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++F + ++++ L S + I + ++ I V+IGV ++ +++ G + ++
Sbjct: 1 MNLFD--ILWLSYKGLISRK------IIAILAIISVVIGVASVTTLVAFTQGVGQSILSV 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
V + ++ + Q ++ +P V V VSG ++ ++
Sbjct: 53 VESLGPKTILILPSRGSLLTQATVATIESLPGVEAVYGVVSGFGTINVEGQPIDVTIIGV 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ S S + G + + ++ S
Sbjct: 113 NNLSAILGQVLLESGSTYPPITSPEAVIGSEVANPVPGVY-------FSVGSEITIQISR 165
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G + + +L +++ L EA N + + + + V + + +
Sbjct: 166 GNSVNLEVVGILSPSGANPLSNSETSIFIPLGEAMAILN-KTSYNELIVEAQSVNDVNTI 224
Query: 241 HENIVRILGNGVVVIDWQQR 260
I I GN + V+ QQ
Sbjct: 225 ATIIEDIYGNQLNVVTVQQL 244
>gi|332162230|ref|YP_004298807.1| macrolide transporter ATP-binding /permease protein [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|325666460|gb|ADZ43104.1| macrolide transporter ATP-binding /permease protein [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
Length = 649
Score = 45.5 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 24/243 (9%), Positives = 80/243 (32%), Gaps = 8/243 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+++AWR + +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 258 ALLMAWRAMSANKMR------TALTMLGIIIGIASVVSILVVGDAAKQLVLADIRAIGTN 311
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+ + A ++ + S
Sbjct: 312 TIDIYPGKDFGDDDPSTRQALVYDDMTALKAQSYVSAVSPTIAGSMRLRYGNIDVAASVS 371
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + + R YG + + + + + +
Sbjct: 372 GVSDQYFRVYGMKLEQGTAITREQVERQSQVVVIDRNTQRRLFPHIKDVVGQVILIGNMP 431
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ V+ + F V++ + I + +K+ + ++ + +V
Sbjct: 432 ATVVGVVEEKQSMFGSSKALRVWVPYSTMASRLMGRSYFDSITIRIKEGYSSKEAEQQLV 491
Query: 246 RIL 248
R+L
Sbjct: 492 RLL 494
>gi|318606293|emb|CBY27791.1| putative ABC transporter ATP-binding protein [Yersinia
enterocolitica subsp. palearctica Y11]
Length = 649
Score = 45.5 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 24/243 (9%), Positives = 80/243 (32%), Gaps = 8/243 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+++AWR + +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 258 ALLMAWRAMSANKMR------TALTMLGIIIGIASVVSILVVGDAAKQLVLADIRAIGTN 311
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+ + A ++ + S
Sbjct: 312 TIDIYPGKDFGDDDPSTRQALVYDDMTALKAQSYVSAVSPTIAGSMRLRYGNIDVAASVS 371
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + + R YG + + + + + +
Sbjct: 372 GVSDQYFRVYGMKLEQGTAITREQVERQSQVVVIDRNTQRRLFPHIKDVVGQVILIGNMP 431
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ V+ + F V++ + I + +K+ + ++ + +V
Sbjct: 432 ATVVGVVEEKQSMFGSSKALRVWVPYSTMASRLMGRSYFDSITIRIKEGYSSKEAEQQLV 491
Query: 246 RIL 248
R+L
Sbjct: 492 RLL 494
>gi|260428546|ref|ZP_05782525.1| macrolide export ATP-binding/permease protein MacB [Citreicella sp.
SE45]
gi|260423038|gb|EEX16289.1| macrolide export ATP-binding/permease protein MacB [Citreicella sp.
SE45]
Length = 644
Score = 45.5 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 24/238 (10%), Positives = 75/238 (31%), Gaps = 6/238 (2%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A + + +++ +F ++ +G++IG+ +++ V+++ NG ++ +++ + I +
Sbjct: 258 MALKSMAAHKLRSF------LTMLGIIIGITSVVSVVALGNGSQQKVLENIASIGTSTID 311
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
+ D + D + + +S+ + + +++ +
Sbjct: 312 IRPGTSFRDRRANRIDTLVGADADALDGMPFAASVSPEVSTTANVIHAGTTASAQVKGVS 371
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
+ + + + S + + +G
Sbjct: 372 AGYFQLGSYTVTRGATFTEDDLAARAQVAVLDSDAAETFFDGADPIGQRVLIGRIPLQVI 431
Query: 191 VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ + + V+ A V I V V D + + I IL
Sbjct: 432 GVVVSSGASFGPQSIKVFTPYTTAMTRITGATTVDSISVQVTDGYDMSEAEAEITEIL 489
>gi|238789633|ref|ZP_04633416.1| Macrolide export ATP-binding/permease protein macB 2 [Yersinia
frederiksenii ATCC 33641]
gi|238722186|gb|EEQ13843.1| Macrolide export ATP-binding/permease protein macB 2 [Yersinia
frederiksenii ATCC 33641]
Length = 649
Score = 45.5 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 24/243 (9%), Positives = 79/243 (32%), Gaps = 8/243 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+++AWR + +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 258 ALLMAWRAMSANKMR------TALTMLGIIIGIASVVSILVVGDAAKQLVLADIRAIGTN 311
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+ + A ++ + S
Sbjct: 312 TIDVYPGKDFGDDDPSTRQALVHDDMTALRAQSYVSAVSPTIAGSMRLRYGNIDVAASVS 371
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + R YG + + + + + +
Sbjct: 372 GVSEQYFRVYGMKLEQGTSITSEQVERQSQVVVIDRNTQRRLFPHLKEVVGEVILIGNMP 431
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ V+ + F V++ + I + +K+ + ++ + +V
Sbjct: 432 ATIVGVVEEKQSMFGSSKALRVWVPYSTMASRLMGRSYFDSITIRIKEGYSSKEAEQQLV 491
Query: 246 RIL 248
R+L
Sbjct: 492 RLL 494
>gi|238791304|ref|ZP_04634943.1| Macrolide export ATP-binding/permease protein macB [Yersinia
intermedia ATCC 29909]
gi|238729437|gb|EEQ20952.1| Macrolide export ATP-binding/permease protein macB [Yersinia
intermedia ATCC 29909]
Length = 643
Score = 45.5 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 31/241 (12%), Positives = 73/241 (30%), Gaps = 6/241 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +R AF +S +G++IG+ +++ M+V G R++++ + +
Sbjct: 254 AIKMAWRSLLGHRIRAF------LSMLGIIIGISSVVSSMAVGEGARQEILSEISQLGTS 307
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + + R DV + + +S + V S
Sbjct: 308 NLDIRPGLGWDKPRPDFERALTQADVALLSQQPYVDSLSPVVSKMVAAVRGDKQVMVSLS 367
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ N F + G D + + + +
Sbjct: 368 GVSNGFFQVKGLSFTVGDGFTPRHVNAREPVVILQPELSDTLFAVGENPIGEIVQLDGIP 427
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ R +M + + + I V V++ + + + +
Sbjct: 428 LRVIGVAKRNGSSFGGLLAAWMPYTSLTERISGDIPLESITVRVREGYNLNEVQREVETV 487
Query: 248 L 248
L
Sbjct: 488 L 488
>gi|258517176|ref|YP_003193398.1| hypothetical protein Dtox_4105 [Desulfotomaculum acetoxidans DSM
771]
gi|257780881|gb|ACV64775.1| protein of unknown function DUF214 [Desulfotomaculum acetoxidans
DSM 771]
Length = 403
Score = 45.5 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 36/265 (13%), Positives = 82/265 (30%), Gaps = 18/265 (6%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M +F F A R +F + AF ++ +G+ + ++I+++S+ G +E + +
Sbjct: 1 MKLFVNF--RQAVRGIFKKKVRAF------LAMLGISTSIASIILLLSLGQGVQEKVSSQ 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + +I L + L +P L A +
Sbjct: 53 FEALGANQLIIIPMRTLKTTSNQPDFLRGLPTFTGTLSLEDIDAIQKVPDVAVAAPQSEN 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGD---------KINIL 171
+ NS V+ ++ + + +
Sbjct: 113 VLTVVRPGGINSADTLITGVTPEYFTLAKLNLSAGQFFTSADETSQNVVLGSAVKETLFG 172
Query: 172 SPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFV 231
+ + + + + + N VY+ +++AQ L + +S I V
Sbjct: 173 EENALGQQIIIRNKRFNVAGVLEPKESIGFSFNERVYLPIEKAQSITGL-DKLSLILVQA 231
Query: 232 KDPDAIEKTHENIVRILGNGVVVID 256
K D +++ + I L D
Sbjct: 232 KSNDVVDRCKDKIGSALRPLHKTTD 256
>gi|46906636|ref|YP_013025.1| ABC transporter, permease protein, putative [Listeria monocytogenes
str. 4b F2365]
gi|254854123|ref|ZP_05243471.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
gi|46879901|gb|AAT03202.1| putative ABC transporter, permease protein [Listeria monocytogenes
serotype 4b str. F2365]
gi|258607513|gb|EEW20121.1| conserved hypothetical protein [Listeria monocytogenes FSL R2-503]
Length = 392
Score = 45.5 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 30/268 (11%), Positives = 85/268 (31%), Gaps = 20/268 (7%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ + +A + L S + F ++ +G++IGV ++ +++S+ +++ +
Sbjct: 5 MTLLQ--SIKLALKQLLSTKFRTF------LTMLGIIIGVFSVTLLVSIGEAISKNVSTQ 56
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + +++ Y + +F + + ++ Q S + V G
Sbjct: 57 LGDMGSNLLTVNFYSDNPNDKFTYKDAKKLLNEDEIGSPEVIQTKEVRTSEKTASNQVAG 116
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
I+ S + + D + V I + I M
Sbjct: 117 INEYYASIKNLELASGRFCSNVDVIYAQKVTIIGSEIAKTYFKEQNPIGEYLQIAGARYM 176
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK- 239
+G+ + + +++ + A+ F + V + K + +
Sbjct: 177 VIGVLKEKGES-------LFGSADKKLFIPISSAERLF-KTDTVDLYYIQTKKVEQVPAA 228
Query: 240 ---THENIVRILGNGVVVIDWQQRYQIF 264
+ + + N + Q
Sbjct: 229 VKVVKKKMSQFFPNNEDAYTVANQQQAL 256
>gi|282599563|ref|ZP_05971013.2| macrolide efflux ABC transporter, permease/ATP-binding protein
[Providencia rustigianii DSM 4541]
gi|282568507|gb|EFB74042.1| macrolide efflux ABC transporter, permease/ATP-binding protein
[Providencia rustigianii DSM 4541]
Length = 648
Score = 45.5 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 31/250 (12%), Positives = 80/250 (32%), Gaps = 10/250 (4%)
Query: 3 IFSRFE--VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
I+ RF +++AWR + N+ + ++ +G++IG+ +++ +M + + + ++
Sbjct: 250 IYGRFSEALLMAWRAMVVNKMR------TLLTMLGIVIGIASVVSIMVIGDAAKGMVLND 303
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ I + + + D+ + Q+ + S
Sbjct: 304 IKSIGTNTISIYPGTDFGSDDPENRQALKDSDITAIAQQPYVQSVTGSIESSARLRNGNI 363
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGK--DLARNLGISIGDKINILSPYGDVT 178
+ + S + + Y + + + + +
Sbjct: 364 DATARVSGVGTDYFNVYAEKFAEGMGFTPEMQSRRAQVVVIDSNTKRRFFPNKLNVVGEI 423
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+ + + VLG + F N V++ I V VKD +
Sbjct: 424 LLINNVPATVIGVLGEQKSIFSAGKNLQVFLPDTTVNGKLLNRPYYDTIVVRVKDGTDAQ 483
Query: 239 KTHENIVRIL 248
+ +VR+L
Sbjct: 484 VAEQQLVRLL 493
>gi|161529222|ref|YP_001583048.1| hypothetical protein Nmar_1714 [Nitrosopumilus maritimus SCM1]
gi|160340523|gb|ABX13610.1| protein of unknown function DUF214 [Nitrosopumilus maritimus SCM1]
Length = 395
Score = 45.5 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 30/255 (11%), Positives = 74/255 (29%), Gaps = 9/255 (3%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNG-FREDMIKRVLGIN 65
+ + +A R LF+ + S+ + + V IG++ + V + G F + N
Sbjct: 3 YRLRLAKRMLFNKKG----SLIG--AVLAVTIGILVIHVNFVIFQGLFDAIVRDISDYRN 56
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
G +++ + + ++ ++ G V +
Sbjct: 57 GDILVTDEADYIDKSDLSVVNWFERIPYVEAATPRLSSTAEMNMTKNGKLVEETRVPIVG 116
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
++ + ++ L N+ +G S V
Sbjct: 117 IDPFRDIRASTVHETVSEGSYVFSRN-SIVLGSNVARDLGGAEVGDSVKVLVVDRYGQDE 175
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ +TV G+ + + + + + N + V + DP + E +
Sbjct: 176 IRRFTVSGIAKSPGGQGFDYTAVIHIDTLRDMMNRQGDTGSFMVKLNDPTKAFEVKEFFL 235
Query: 246 RILGN-GVVVIDWQQ 259
R N ++
Sbjct: 236 RSFPNDDFKAETIEE 250
>gi|153949325|ref|YP_001401575.1| macrolide ABC transporter ATP-binding protein /permease [Yersinia
pseudotuberculosis IP 31758]
gi|152960820|gb|ABS48281.1| macrolide-specific ABC-type efflux carrier protein MacB [Yersinia
pseudotuberculosis IP 31758]
Length = 649
Score = 45.5 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 23/243 (9%), Positives = 79/243 (32%), Gaps = 8/243 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+++AWR + +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 258 ALLMAWRAMSANKMR------TALTMLGIIIGIASVVSILVVGDAAKQLVLADIRAIGTN 311
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+ + A + +
Sbjct: 312 TIDIYPGKDFGDDDPSTRQALVHDDMAALKAQSYVSAVSPSIGGSMRLRFGNIDVAASVL 371
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK--INILSPYGDVTPMGMGIR 185
+ + + R +G + + + + + + +
Sbjct: 372 GVSDEYFRVFGMAMEQGAPITREQVERQAQTVVIDLNTQRRLFPHMKDVVGQVILVGNMP 431
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ V+ + F V++ + I V +K+ + ++ + +V
Sbjct: 432 ATVVGVVAEKKSMFGSNKALRVWVPYSTMANRLMGRSYFDSITVRIKEGYSSKEAEQQLV 491
Query: 246 RIL 248
R+L
Sbjct: 492 RLL 494
>gi|209964940|ref|YP_002297855.1| macrolide-specific ABC-type efflux carrier [Rhodospirillum centenum
SW]
gi|209958406|gb|ACI99042.1| macrolide-specific ABC-type efflux carrier [Rhodospirillum centenum
SW]
Length = 407
Score = 45.5 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 39/252 (15%), Positives = 82/252 (32%), Gaps = 14/252 (5%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A + +N ++ S ++ +G++IGV A+I +++V +G E + ++V I ++++
Sbjct: 9 IALSAIRAN------TLRSLLTVLGIVIGVSAVITMVAVGSGASEQVQQQVSSIGANLLM 62
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS--- 127
+ D + + S GSG + G NS
Sbjct: 63 VTPGARRAGGVMMQGSESLSEDDAEAIAREVPGVMYVAPSRTGSGQYIAGRFNSYGRLEG 122
Query: 128 -YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ R + + V +A + P G + +
Sbjct: 123 VTIDYLAVREWEIEAGRSFSPSEVRTAGQVALIGRTVATELFGDSDPVGQSIRVNRMPVT 182
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFN----LENAVSGIEVFVKDPDAIEKTHE 242
T+ + F + +V + L A+ V I V + +E
Sbjct: 183 VIGTLRSKGQTTFGQDQDRIVMIPLSTARKVLGNSRSQPRRVDLIMVKTDTAERLEPARA 242
Query: 243 NIVRILGNGVVV 254
I +L + V
Sbjct: 243 EITALLRQRMRV 254
>gi|148546922|ref|YP_001267024.1| ABC transporter-like protein [Pseudomonas putida F1]
gi|148510980|gb|ABQ77840.1| ABC transporter related [Pseudomonas putida F1]
Length = 656
Score = 45.5 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 32/240 (13%), Positives = 80/240 (33%), Gaps = 13/240 (5%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +++
Sbjct: 273 AWRVMWINR------FRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMGAFGSNIIYL 326
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
P L D + + + + ++ G +GV + N
Sbjct: 327 NGKPPAPRAPEGIITL----DDTRAIATLPQVRMIMPVNGGKAGVRYGNQDLKLYVGGSN 382
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL---SPYGDVTPMGMGIRSKS 188
++ N A I + + +P G +
Sbjct: 383 TYFPQIFNWPVAQGSFFTEADEAAGAAVAVIGEKTREKLFADRNPVGQYILIENAPFQVI 442
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ G + V + A + A + + D +++T + I ++L
Sbjct: 443 GVLAGKGASSGDQDADARVMVPYTTASVRLFGNQAPEYVVIAAADARQVKQTEQVIDQLL 502
>gi|270158268|ref|ZP_06186925.1| ABC transporter [Legionella longbeachae D-4968]
gi|289163475|ref|YP_003453613.1| ABC transporter permease protein [Legionella longbeachae NSW150]
gi|269990293|gb|EEZ96547.1| ABC transporter [Legionella longbeachae D-4968]
gi|288856648|emb|CBJ10459.1| putative ABC transporter permease protein [Legionella longbeachae
NSW150]
Length = 395
Score = 45.5 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 35/247 (14%), Positives = 83/247 (33%), Gaps = 21/247 (8%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMS--------VMNGFREDMIKRVLG 63
A L + + +F ++ +G+++G A++ ++S + F+ +
Sbjct: 10 ALVNLTAAKLRSF------LAILGILVGTAAVVALISCGQLATEKALAQFKALGTDLLSV 63
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ Q V D IP ++ + P+ + G S +N
Sbjct: 64 AVYSKTVGQGNQESVSVAQWEQLSDRIPYIMDMAPYSTAYQ--PISYQGKSMQGAVIGAN 121
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + N VS +IG +LAR + D+ + +
Sbjct: 122 EHLAKIVNIKLAAGHFVSFVDSYEHYCVIGANLARQIKEISFDEPIGRQLRIGRSLYTII 181
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
++ + G F + D + + + V+ + + ++ I++ E
Sbjct: 182 GIAEPWKENGFF-----NEDINQAVIVPLAGINLISKDAKVNNVILKLRPDSPIDEVIEE 236
Query: 244 IVRILGN 250
I +I+G+
Sbjct: 237 IKQIIGS 243
>gi|225182090|ref|ZP_03735519.1| protein of unknown function DUF214 [Dethiobacter alkaliphilus AHT
1]
gi|225167209|gb|EEG76031.1| protein of unknown function DUF214 [Dethiobacter alkaliphilus AHT
1]
Length = 402
Score = 45.5 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 38/264 (14%), Positives = 81/264 (30%), Gaps = 23/264 (8%)
Query: 8 EVIV--AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFRE---DMIKRVL 62
+ A R L+SN+ + + + IG+++G+ L +V+++ G + + + RV
Sbjct: 3 SKFIKEAARQLWSNK------LTTALMAIGIILGISVLTIVIALGQGTKASILERVDRVG 56
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ + + Q + + + + S + G
Sbjct: 57 ATDTFTLRTFPWGQGGGGQHSETENITLTAQDLFSLQQEINGINAIIPTLNSRTTITGEL 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
N + + + +V + D+ +I + D +GM
Sbjct: 117 NYLENVSVQGVTAGFQDVRPWNVTSGVLFSEYDITEGTRAAIVGQAVANQLASDGNILGM 176
Query: 183 GIRSKSYTVLG------MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
I S + + +V + Q F + S + V V D D
Sbjct: 177 TIHVDSLQLEVIGVLESRGATGSGRNADEVVLVPEPVFQRLF-QPDGYSTVTVQVNDIDR 235
Query: 237 IEKTHEN----IVRI-LGNGVVVI 255
+E E + LG+ V
Sbjct: 236 LEAISEQTMSFLEATYLGHEFYVR 259
>gi|91224239|ref|ZP_01259502.1| putative ABC transporter, ATP-binding protein [Vibrio alginolyticus
12G01]
gi|91191150|gb|EAS77416.1| putative ABC transporter, ATP-binding protein [Vibrio alginolyticus
12G01]
Length = 654
Score = 45.5 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 24/242 (9%), Positives = 79/242 (32%), Gaps = 7/242 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A + S+R F ++ +G++IG+ +++ V+++ NG ++ ++ + + +
Sbjct: 264 ALKMALLAMSSHRMRTF------LTMLGIIIGIASVVSVVALGNGSQQQILSNISSMGTN 317
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + D + + D + + LS+ + + +
Sbjct: 318 TIDVRPGKGFGDRRSGRVKTLTADDAKSLESLPFVDSVTPSLSNSLTVRYANQDATASVE 377
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLAR-NLGISIGDKINILSPYGDVTPMGMGIRS 186
+ + R G + + + ++ +
Sbjct: 378 GVGEDYFRVRGYEIAKGQFWDEESVNSLAQEAVIDDNTRKEMFADRNPIGEVIFLGSLPV 437
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ V F + D +++ + ++GI V + + ++I+
Sbjct: 438 RIVGVTQKKEDAFGNSDALKIWVPYTTMSGRMMGQRYLNGITVRIDENAPSAAVEQSIIN 497
Query: 247 IL 248
+L
Sbjct: 498 LL 499
>gi|329766917|ref|ZP_08258445.1| hypothetical protein HMPREF0428_00142 [Gemella haemolysans M341]
gi|328837642|gb|EGF87267.1| hypothetical protein HMPREF0428_00142 [Gemella haemolysans M341]
Length = 419
Score = 45.5 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 35/261 (13%), Positives = 78/261 (29%), Gaps = 6/261 (2%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMS----VMNGFRED 56
MSIF+R + + + + S+ +++ SF G ++ + + V GF +
Sbjct: 1 MSIFNRAYLYIIRKKVRSSILFFIVTLISFFLLSGSILNTTVGSISKNLYKDVNFGFTIE 60
Query: 57 MIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
I + +++ + + V K + + ++ S +
Sbjct: 61 SIDKSNKEIEKDTLKKINEVAGVNEKNYLYAKSVNVVDKKVVQENQNITITEEMKNKSNL 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
++ S + + + I ++ I
Sbjct: 121 VMMNGITSTKNNIDFKSEVLKLEKGRHIEENDQNKILVHEKFATINNLNLGDKIKLEQNG 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL--ENAVSGIEVFVKDP 234
T + S F D+ VY +Q N N V+ +E V +P
Sbjct: 181 KTVEFEVVGIFSGEKTNNFEGLSSDFIENTVYTDYNSSQELLNYSTSNRVTSVEYGVNNP 240
Query: 235 DAIEKTHENIVRILGNGVVVI 255
++ N+ + N + V
Sbjct: 241 TNLDNIIRNVENLGINNISVS 261
>gi|28900079|ref|NP_799734.1| putative ABC transporter ATP-binding protein [Vibrio
parahaemolyticus RIMD 2210633]
gi|260365732|ref|ZP_05778228.1| ABC transporter, ATP-binding protein [Vibrio parahaemolyticus
K5030]
gi|260880654|ref|ZP_05893009.1| macrolide export ATP-binding/permease protein MacB [Vibrio
parahaemolyticus AN-5034]
gi|260897739|ref|ZP_05906235.1| macrolide export ATP-binding/permease protein MacB [Vibrio
parahaemolyticus Peru-466]
gi|81839699|sp|Q87JM4|MACB_VIBPA RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|28808362|dbj|BAC61567.1| putative ABC transporter, ATP-binding protein [Vibrio
parahaemolyticus RIMD 2210633]
gi|308086215|gb|EFO35910.1| macrolide export ATP-binding/permease protein MacB [Vibrio
parahaemolyticus Peru-466]
gi|308091819|gb|EFO41514.1| macrolide export ATP-binding/permease protein MacB [Vibrio
parahaemolyticus AN-5034]
gi|308115011|gb|EFO52551.1| ABC transporter, ATP-binding protein [Vibrio parahaemolyticus
K5030]
Length = 654
Score = 45.5 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 24/242 (9%), Positives = 79/242 (32%), Gaps = 7/242 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A + S+R F ++ +G++IG+ +++ V+++ NG ++ ++ + + +
Sbjct: 264 ALKMALLAMSSHRMRTF------LTMLGIIIGIASVVSVVALGNGSQQQILSNISSMGTN 317
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + D + + D + + LS+ + + +
Sbjct: 318 TIDVRPGKGFGDRRSGRVKTLTADDAKSLESLPFVDSVTPSLSNSLTVRYANQDATASVE 377
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLAR-NLGISIGDKINILSPYGDVTPMGMGIRS 186
+ + R G + + + ++ +
Sbjct: 378 GVGEDYFRVRGYEIAKGQFWDEESVNSLAQEAVIDDNTRKEMFADRNPIGEVIFLGSLPV 437
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ V F + D +++ + ++GI V + + ++I+
Sbjct: 438 RIVGVTQKKEDAFGNSDALKIWVPYTTMSGRMMGQRYLNGITVRIDENAPSAAVEQSIIN 497
Query: 247 IL 248
+L
Sbjct: 498 LL 499
>gi|307354744|ref|YP_003895795.1| hypothetical protein Mpet_2614 [Methanoplanus petrolearius DSM
11571]
gi|307157977|gb|ADN37357.1| protein of unknown function DUF214 [Methanoplanus petrolearius DSM
11571]
Length = 402
Score = 45.5 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 32/267 (11%), Positives = 79/267 (29%), Gaps = 20/267 (7%)
Query: 3 IFS--RFEVIVAWRYL-FSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+F R +A R R F++I + + + +I + S+++G E +
Sbjct: 1 MFEDLRVSAFLAARATQRGGRGRIFMNIVI------IALVLTNMIFMPSIISGAIEVFNQ 54
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
+ + +I + + + L + V V+ S + + +
Sbjct: 55 QNVDYITSDIIIEPREDDRYISDLDDLLAVLNRVPGVVRASPRYEMPSSIEFEEESITLG 114
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ ++ + + + D + + + L DK P
Sbjct: 115 ITAFDPRDEVE---VTKFQDAMLEGDFLGSGSMDEIIIGRLVSGNKDKTKDYYPSLGGAE 171
Query: 180 MGMGIRSKSYTVLGM-------FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK 232
+G I + + F + D + + + + I +
Sbjct: 172 VGDTITVRYSNGVVRDYRVKGIFNTKSWTADYMAIVTWDEMNSVLGYDNDVADEILIKTS 231
Query: 233 DPDAIEKTHENIVRILGNGVVVIDWQQ 259
+ +NI+ G G V W++
Sbjct: 232 KNTDVSDVKKNILE-FGVGESVKTWEE 257
>gi|121606438|ref|YP_983767.1| hypothetical protein Pnap_3550 [Polaromonas naphthalenivorans CJ2]
gi|120595407|gb|ABM38846.1| protein of unknown function DUF214 [Polaromonas naphthalenivorans
CJ2]
Length = 402
Score = 45.5 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 32/261 (12%), Positives = 86/261 (32%), Gaps = 13/261 (4%)
Query: 14 RYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQK 73
R + N +F ++ +G++IGV A+I ++++ NG + ++ G+ +++ +
Sbjct: 11 RSIRRNLLRSF------LTILGIVIGVSAVITMVTLGNGATLAVQNQISGLGTNLLQVRP 64
Query: 74 YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSF 133
+ A F + G + S LV N S + ++
Sbjct: 65 GQRMGPGSGGATAPSFSELDADAIASQIGGVIAVAPEARASSTLVANGRNWTSSVIGSTN 124
Query: 134 SRFYGNVSND----FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
+ + G + + G+ +
Sbjct: 125 AWLQTGNWKLGDGREFSSDELRAGAAVCLIGETVRRELFGTRPALGEPLRVKQISCEVIG 184
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
+ + F + + V + ++ Q + V+ + V +K+ E+ ++ ++L
Sbjct: 185 VLASKGQGAFGNDQDDTVLLPIKTLQRRISGNTRVNTLLVSMKEGSNAERVKASLTQLLR 244
Query: 250 NGVVVIDWQQRYQIFFSCYES 270
+ D + F+ ++
Sbjct: 245 ERRKLADSDEDN---FNVLDT 262
>gi|123441827|ref|YP_001005811.1| macrolide transporter ATP-binding /permease protein [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|122088788|emb|CAL11594.1| putative ABC transporter ATP-binding protein [Yersinia
enterocolitica subsp. enterocolitica 8081]
Length = 649
Score = 45.5 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 24/243 (9%), Positives = 80/243 (32%), Gaps = 8/243 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+++AWR + +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 258 ALLMAWRAMSANKMR------TALTMLGIIIGIASVVSILVVGDAAKQLVLADIRAIGTN 311
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+ + A ++ + S
Sbjct: 312 TIDVYPGKDFGDDDPSTRQALVYDDMAALKAQSYVSAVSPTIAGSMRLRYGNIDVAASVS 371
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + + R YG + + + + + +
Sbjct: 372 GVSDQYFRVYGMKLEQGTAITREQVERQSQVVVIDRNTQRRLFPHIKDVVGQVILIGNMP 431
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ V+ + F V++ + I + +K+ + ++ + +V
Sbjct: 432 ATVVGVVEEKQSMFGSSKALRVWVPYSTMASRLMGRSYFDSITIRIKEGYSSKEAEQQLV 491
Query: 246 RIL 248
R+L
Sbjct: 492 RLL 494
>gi|323948627|gb|EGB44537.1| ABC transporter [Escherichia coli H252]
Length = 639
Score = 45.5 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 32/253 (12%), Positives = 86/253 (33%), Gaps = 10/253 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK--RVLGIN 65
+ +A + + ++R + ++ IG++ G+ +++ V+++ G R++ ++ + LG N
Sbjct: 256 SMQMALKAMKTHRLR------TTLTMIGIVFGIASVVTVVALGEGARQETLEEIKSLGTN 309
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+ + + I + + + F+ + S + I++ +
Sbjct: 310 VVSIYPGQDLFDDSIESIRTLVPADANALAKQGFIDSVSPEVSASDNIRFLGKSAIASIN 369
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
++ + + R + + + L G + +G
Sbjct: 370 GVGREHFRVKGIELLQGTTFRDDRNALQEVIIDENTRKAIFDNTGLQALGQIVFLGSVPA 429
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
R + V+M + ++GI V +KD E I
Sbjct: 430 RVVGIAKSNNRSDASNRIT--VWMPYSTVMYRIVGKPVLTGISVRLKDNVDNEAAISAIS 487
Query: 246 RILGNGVVVIDWQ 258
++L + D+Q
Sbjct: 488 QLLTRRHGIKDFQ 500
>gi|270261163|ref|ZP_06189436.1| macrolide export ATP-binding/permease protein macB 1 [Serratia
odorifera 4Rx13]
gi|270044647|gb|EFA17738.1| macrolide export ATP-binding/permease protein macB 1 [Serratia
odorifera 4Rx13]
Length = 648
Score = 45.5 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 28/250 (11%), Positives = 81/250 (32%), Gaps = 10/250 (4%)
Query: 3 IFSRF--EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+ RF +++AWR + +N+ + ++ +G++IG+ +++ ++ + + ++ ++
Sbjct: 250 MAGRFREALVMAWRAMAANKMR------TALTMLGIIIGIASVVSILVIGDAAKQMVLAD 303
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ I + V D + D+ + A ++S L
Sbjct: 304 IKSIGTNTVDIYPGKDFGDDDPTFRQSLKYDDLDALREQPYISALSPTIASSMRLRLGNV 363
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK--INILSPYGDVT 178
++ + + F R YG + + + +
Sbjct: 364 DVAANVTGVSEQFFRVYGMTFTQGAGIDPFQVQSQAQTVVIDANTQRRLFPHQKNVVGEV 423
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+ + + V + F V++ I V ++D +
Sbjct: 424 MLVGNMPATVVGVAKEKQSMFGSSKTLNVWVPYSTMANRLMGNAYFDSITVRIRDDYNSQ 483
Query: 239 KTHENIVRIL 248
+ + + R+L
Sbjct: 484 EAEQQLTRLL 493
>gi|194446935|ref|YP_002038987.1| macrolide export ATP-binding/permease protein MacB 2 [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|218534606|ref|YP_002401136.1| putative type I secretion ATP binding protein EtsB [Escherichia
coli S88]
gi|194358687|gb|ACF57130.1| macrolide export ATP-binding/permease protein MacB 2 [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|218349810|emb|CAQ87207.1| putative type I secretion ATP binding protein EtsB [Escherichia
coli S88]
gi|315285089|gb|EFU44534.1| ABC transporter, ATP-binding protein [Escherichia coli MS 110-3]
Length = 646
Score = 45.5 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 32/253 (12%), Positives = 86/253 (33%), Gaps = 10/253 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK--RVLGIN 65
+ +A + + ++R + ++ IG++ G+ +++ V+++ G R++ ++ + LG N
Sbjct: 256 SMQMALKAMKTHRLR------TTLTMIGIVFGIASVVTVVALGEGARQETLEEIKSLGTN 309
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+ + + I + + + F+ + S + I++ +
Sbjct: 310 VVSIYPGQDLFDDSIESIRTLVPADANALAKQGFIDSVSPEVSASDNIRFLGKSAIASIN 369
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
++ + + R + + + L G + +G
Sbjct: 370 GVGREHFRVKGIELLQGTTFRDDRNALQEVIIDENTRKAIFDNTGLQALGQIVFLGSVPA 429
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
R + V+M + ++GI V +KD E I
Sbjct: 430 RVVGIAKSNNRSDASNRIT--VWMPYSTVMYRIVGKPVLTGISVRLKDNVDNEAAISAIS 487
Query: 246 RILGNGVVVIDWQ 258
++L + D+Q
Sbjct: 488 QLLTRRHGIKDFQ 500
>gi|254361268|ref|ZP_04977411.1| ABC superfamily ATP binding cassette transporter, ABC/membrane
protein [Mannheimia haemolytica PHL213]
gi|153092764|gb|EDN73807.1| ABC superfamily ATP binding cassette transporter, ABC/membrane
protein [Mannheimia haemolytica PHL213]
Length = 640
Score = 45.5 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 19/241 (7%), Positives = 75/241 (31%), Gaps = 7/241 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + +++ + ++ +G++IG+ ++I V+++ G ++ ++ + + +
Sbjct: 252 SFKMATSAIMAHKMR------AILTMLGIIIGITSVISVVALGRGSQQQILSNINNLGTN 305
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + + I D + + ++ + + +
Sbjct: 306 TMDIMNGTGFGDRRANLTKNLTISDALMLSRQNYVESTTPSSNVSATLIYGNTAVTGSVR 365
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ F G + + K L+ + + + +
Sbjct: 366 GVGEQFIDVKGLKLISGRFFSAEEVKNVAQVIVIDPNTQKDLGLTEPVEGKTILVDKKPL 425
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ + + + ++ + + + V +KD + ++I +
Sbjct: 426 QIIGVAQ-QSNNMNQSSLTLWAPYTTIMQRISGAKQIDSLTVKIKDDIESQTAEKSIAEL 484
Query: 248 L 248
L
Sbjct: 485 L 485
>gi|84060877|ref|YP_444080.1| EtsB [Escherichia coli]
gi|157418281|ref|YP_001481353.1| EtsB [Escherichia coli APEC O1]
gi|169546433|ref|YP_001711875.1| EtsB [Escherichia coli]
gi|222104923|ref|YP_002539412.1| EtsB [Escherichia coli]
gi|300905117|ref|ZP_07122921.1| ABC transporter, ATP-binding protein [Escherichia coli MS 84-1]
gi|301306710|ref|ZP_07212766.1| ABC transporter, ATP-binding protein [Escherichia coli MS 124-1]
gi|331652494|ref|ZP_08353505.1| macrolide export ATP-binding/permease protein MacB 2 [Escherichia
coli M718]
gi|331685931|ref|ZP_08386508.1| macrolide export ATP-binding/permease protein MacB 2 [Escherichia
coli H299]
gi|126215740|sp|P0C2H3|MACB2_ECOK1 RecName: Full=Macrolide export ATP-binding/permease protein MacB 2
gi|126215741|sp|P0C2H2|MACB_ECOLX RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|76781969|gb|ABA54762.1| EtsB [Escherichia coli]
gi|88770331|gb|ABD51768.1| EtsB [Escherichia coli APEC O1]
gi|168830985|gb|ACA34766.1| EtsB [Escherichia coli]
gi|221589348|gb|ACM18345.1| EtsB [Escherichia coli]
gi|300402986|gb|EFJ86524.1| ABC transporter, ATP-binding protein [Escherichia coli MS 84-1]
gi|300838069|gb|EFK65829.1| ABC transporter, ATP-binding protein [Escherichia coli MS 124-1]
gi|315252826|gb|EFU32794.1| ABC transporter, ATP-binding protein [Escherichia coli MS 85-1]
gi|315297095|gb|EFU56375.1| ABC transporter, ATP-binding protein [Escherichia coli MS 16-3]
gi|331049600|gb|EGI21666.1| macrolide export ATP-binding/permease protein MacB 2 [Escherichia
coli M718]
gi|331076884|gb|EGI48105.1| macrolide export ATP-binding/permease protein MacB 2 [Escherichia
coli H299]
Length = 646
Score = 45.5 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 32/253 (12%), Positives = 86/253 (33%), Gaps = 10/253 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK--RVLGIN 65
+ +A + + ++R + ++ IG++ G+ +++ V+++ G R++ ++ + LG N
Sbjct: 256 SMQMALKAMKTHRLR------TTLTMIGIVFGIASVVTVVALGEGARQETLEEIKSLGTN 309
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+ + + I + + + F+ + S + I++ +
Sbjct: 310 VVSIYPGQDLFDDSIESIRTLVPADANALAKQGFIDSVSPEVSASDNIRFLGKSAIASIN 369
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
++ + + R + + + L G + +G
Sbjct: 370 GVGREHFRVKGIELLQGTTFRDDRNALQEVIIDENTRKAIFDNTGLQALGQIVFLGSVPA 429
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
R + V+M + ++GI V +KD E I
Sbjct: 430 RVVGIAKSNNRSDASNRIT--VWMPYSTVMYRIVGKPVLTGISVRLKDNVDNEAAISAIS 487
Query: 246 RILGNGVVVIDWQ 258
++L + D+Q
Sbjct: 488 QLLTRRHGIKDFQ 500
>gi|238795828|ref|ZP_04639341.1| Macrolide export ATP-binding/permease protein macB 2 [Yersinia
mollaretii ATCC 43969]
gi|238720291|gb|EEQ12094.1| Macrolide export ATP-binding/permease protein macB 2 [Yersinia
mollaretii ATCC 43969]
Length = 649
Score = 45.5 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 24/243 (9%), Positives = 79/243 (32%), Gaps = 8/243 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+++AWR + +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 258 ALLMAWRAMSANKMR------TALTMLGIIIGIASVVSILVVGDAAKQMVLADIRAIGTN 311
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+ + A +S + S
Sbjct: 312 TIDVYPGKDFGDDDPSTRQALVYDDMAALKEQSYVSAVSPTISGSMRLRYGNIDVAASVS 371
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + R YG + + + + + +
Sbjct: 372 GVSEQYFRVYGMKLEQGTAITHEQVERQSQVVVIDRNTQRRLFPHLKEVVGQVILVGNMP 431
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ V+ + F +++ + I + +K+ + ++ + +V
Sbjct: 432 ATVVGVVEEKQSMFGSSKALRIWVPYSTMASRLMGRSYFDSITIRIKEGYSSKEAEQQLV 491
Query: 246 RIL 248
R+L
Sbjct: 492 RLL 494
>gi|315187525|gb|EFU21281.1| protein of unknown function DUF214 [Spirochaeta thermophila DSM
6578]
Length = 421
Score = 45.5 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 36/278 (12%), Positives = 91/278 (32%), Gaps = 32/278 (11%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ ++ ++ + L + + I+ V +G++ I V S++ G D + +L
Sbjct: 1 MKAKTLFSLSLKNLTRYTRR------TIITASAVAVGILLFIFVDSILKGAERDSERNLL 54
Query: 63 GINGHVVIQQKYYPLVDYQ----------------FIANRLDFIPDVIKVLPFVSGQAFV 106
+ F+A++ + L +
Sbjct: 55 WYETGSAQIFTGEFWEEKDRLPLNKGIEEPDEVLSFLASKGVKAAPRVTALGELVVYKDP 114
Query: 107 SGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGD 166
+ D + G+ + +GVI+G+ LA +LG +G
Sbjct: 115 YPEDGSLQVRITAVDPVRDPEVFRLEDEVVEGSWFSGSPGEEGVILGQWLAEDLGARVGY 174
Query: 167 KINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSG 226
+ +++ D ++ T++G+ P + VY+ L A Y ++ V+
Sbjct: 175 PVTLVTRTRDG-----AYQTMDLTIVGIVATPNPVVNRTGVYLPLDTADFYLDMGGTVTS 229
Query: 227 IEVFVKD----PDAIEKTHENIVRILGNGVVVIDWQQR 260
I + + + + + + + + + W+
Sbjct: 230 IALSLPEHIPVEEQVAAFGPALAARFPD-LTLKTWKDL 266
>gi|301167063|emb|CBW26642.1| putative membrane protein [Bacteriovorax marinus SJ]
Length = 389
Score = 45.5 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 40/266 (15%), Positives = 86/266 (32%), Gaps = 20/266 (7%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ F + + + F++ +G+ I AL+V+ S M G + + R
Sbjct: 1 MILNFCRYFITYIFKAKTRQRLL----FLAIVGLFISSFALLVLQSTMGGLQNKLTTRSK 56
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
++G VI+ + + + L V + + V
Sbjct: 57 TVDGSAVIEITDLSREESAKLYDELVNKQFNPSVEYEIELLLRQLNYITPVVLRGVDTSK 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + G I+G DLA + + GD+ +++SP + M
Sbjct: 117 FTPSFLDKKDLEQ-------------GAIVGHDLAYKVSLMEGDEFSLISPSHVDSLMDD 163
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
R R P+ D V++ L Q A++ I ++ +
Sbjct: 164 IPRLIQVDASSFVRTDVPESDMFNVWVRLPVVQNLIRKR-AINRIRLYKDHDF--TELKS 220
Query: 243 NIVRILGNGVVVIDWQQRYQIFFSCY 268
+ G+ V ++ W +++
Sbjct: 221 WLESEYGDKVRLVTWADKFKNLVWAL 246
>gi|302876262|ref|YP_003844895.1| hypothetical protein Clocel_3453 [Clostridium cellulovorans 743B]
gi|307686994|ref|ZP_07629440.1| hypothetical protein Ccel74_02491 [Clostridium cellulovorans 743B]
gi|302579119|gb|ADL53131.1| protein of unknown function DUF214 [Clostridium cellulovorans 743B]
Length = 390
Score = 45.5 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 39/258 (15%), Positives = 87/258 (33%), Gaps = 19/258 (7%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + +A + + SN+ S ++ IG++IG+ ++I+++ + NG + + +
Sbjct: 1 MKLIHTI--KLALKNIVSNKMR------STLTMIGLIIGISSVIILVGIGNGSSKSITDQ 52
Query: 61 --VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
LG N V + + ++ I V V P +S + + S +
Sbjct: 53 VSSLGTNLITVSVKNSSLKYLKSEDIDEVEKISGVKYVAPSISTSGTIKYQDTSQSISIS 112
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
+ +V + ++ K +++G L + D
Sbjct: 113 GVTDTFLDVRAMTLSRGRFVSVLDVENKNKVIVLGSTL--------ATDLFGFLNPIDKY 164
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
G K VL + + + L A +N +S + + D ++
Sbjct: 165 VTINGNNYKVIGVLASQGSSQGTNTDELAMIPLSTAMTLAKTKN-ISTVYIEANSKDVVD 223
Query: 239 KTHENIVRILGNGVVVID 256
T +I +L +
Sbjct: 224 STLASIQTLLAELLNSTT 241
>gi|291301941|ref|YP_003513219.1| hypothetical protein Snas_4481 [Stackebrandtia nassauensis DSM
44728]
gi|290571161|gb|ADD44126.1| protein of unknown function DUF214 [Stackebrandtia nassauensis DSM
44728]
Length = 854
Score = 45.5 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 36/247 (14%), Positives = 74/247 (29%), Gaps = 7/247 (2%)
Query: 13 WRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQ 72
++ L S + F+S + I +GV LI+ S+ + R+ ++ V
Sbjct: 6 FKSLLSRKARLFMSGLAVI--LGVAFISGTLILNASLGDSIRDMFATAYKNVDVQVTPDA 63
Query: 73 KYYPLVDYQFIA---NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
A + + P V K V+ A + VL + +
Sbjct: 64 DESKDKVATIPADLVDEIKSQPHVDKATAEVADAAGGVQVLDKNEKVLPPTGPPTIGTNW 123
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
+ + V I K L+ G +GD + ++ P T S +
Sbjct: 124 TGVNDPMEMADGSGPEASDEVAINKGLSDATGYEVGDTMKLVLPNSGDTKPQSFEVSGVF 183
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
G + + + ++ E+ S + V + + + + LG
Sbjct: 184 EYSGNRGSLGGESTVS--FTTETAQKMLLGKEDVFSSVNVKSDGSVSQTELKKQLSSELG 241
Query: 250 NGVVVID 256
+
Sbjct: 242 GDYQIKT 248
>gi|328470062|gb|EGF40973.1| putative ABC transporter ATP-binding protein [Vibrio
parahaemolyticus 10329]
Length = 654
Score = 45.5 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 24/242 (9%), Positives = 79/242 (32%), Gaps = 7/242 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A + S+R F ++ +G++IG+ +++ V+++ NG ++ ++ + + +
Sbjct: 264 ALKMALLAMSSHRMRTF------LTMLGIIIGIASVVSVVALGNGSQQQILSNISSMGTN 317
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + D + + D + + LS+ + + +
Sbjct: 318 TIDVRPGKGFGDRRSGRVKTLTADDAKSLESLPFVDSVTPSLSNSLTVRYANQDAAASVE 377
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLAR-NLGISIGDKINILSPYGDVTPMGMGIRS 186
+ + R G + + + ++ +
Sbjct: 378 GVGEDYFRVRGYEIAKGQFWDEESVNSLAQEAVIDDNTRKEMFADRNPIGEVIFLGSLPV 437
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ V F + D +++ + ++GI V + + ++I+
Sbjct: 438 RIVGVTQKKEDAFGNSDALKIWVPYTTMSGRMMGQRYLNGITVRIDENAPSAAVEQSIIN 497
Query: 247 IL 248
+L
Sbjct: 498 LL 499
>gi|50119829|ref|YP_048996.1| macrolide-specific ABC-type efflux carrier [Pectobacterium
atrosepticum SCRI1043]
gi|81827221|sp|Q6D8T5|MACB_ERWCT RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|49610355|emb|CAG73799.1| macrolide-specific ABC-type efflux carrier [Pectobacterium
atrosepticum SCRI1043]
Length = 650
Score = 45.5 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 31/262 (11%), Positives = 80/262 (30%), Gaps = 19/262 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + + R F ++ +G++IG+ +++ V+++ G +E ++ + +
Sbjct: 259 AFKMALLAMNAQRMRTF------LTMLGIIIGIASVVSVVALGKGSQEQVLANINSMGTS 312
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D A + D+ + + +S+ + ++ S
Sbjct: 313 TLEIFPGKGFGDMDASAIQTLRASDIQPLTQQPYVHSVTPSVSTSVTMRYGNIAVSASIS 372
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ F G + + + + +
Sbjct: 373 GVGEQFFTVRGYTLERGVLFPRSSVDELTQDAVIDKNTRDKLFPHGEDPIGQVILVGSLP 432
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ V+ + F +N V++ ++ + I V VKD + + I
Sbjct: 433 VRIIGVVSKNQGGFGSDENLNVWVPYTTVMKRMVGQSYLKSITVRVKDNVDMSIAEQRIT 492
Query: 246 RILGNGVVVIDWQQRYQI--FF 265
+L QR+ FF
Sbjct: 493 DLL---------MQRHGTKDFF 505
>gi|326792012|ref|YP_004309833.1| hypothetical protein Clole_2938 [Clostridium lentocellum DSM 5427]
gi|326542776|gb|ADZ84635.1| protein of unknown function DUF214 [Clostridium lentocellum DSM
5427]
Length = 400
Score = 45.1 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 79/247 (31%), Gaps = 13/247 (5%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ A L N+ F ++ +G++IG+ A+I+++S+ G + + + +
Sbjct: 5 LKNALSQLKGNKLRTF------LTMLGMLIGISAVIIILSLGEGVKGYVNGQFSSVGKGT 58
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV----LVRGISNS 124
+ D D I + +V+ + G + ++ GI++
Sbjct: 59 IQIMTMDYSEDNLLTPEDFDVISQIPEVMDVLPYHEQYIGTAKNYKKEEKTLMLFGITHD 118
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
S + D VII +D + ++ D L D+ G
Sbjct: 119 YEKVQSISLKYGRMFLEQDETLRSNVIIVEDNFAKIMFNVKDPKYALGKSIDMNIGGEVQ 178
Query: 185 RSKSYTVLGMFR--MRFPDYDNGMVYMSLQEAQLYF-NLENAVSGIEVFVKDPDAIEKTH 241
+ V + + +VY+ A Y E V + +
Sbjct: 179 NFEIVGVTKSYYPSAAPEEMIAPIVYLPFATADKYLQGGEGKSYEAMVIINEDYEASDYS 238
Query: 242 ENIVRIL 248
I ++L
Sbjct: 239 TPIRKLL 245
>gi|237752536|ref|ZP_04583016.1| ABC transporter [Helicobacter winghamensis ATCC BAA-430]
gi|229376025|gb|EEO26116.1| ABC transporter [Helicobacter winghamensis ATCC BAA-430]
Length = 406
Score = 45.1 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 30/257 (11%), Positives = 81/257 (31%), Gaps = 14/257 (5%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A+R + K F+ S ++ +G++IGV A+I+++++ NG + + +R+ + +
Sbjct: 5 AFFLAFRQI----KRNFLR--SLLTMLGIIIGVSAVIIMITLGNGTTQVVTQRISSLGSN 58
Query: 68 VVIQQKYYPLV-----DYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+++ QF N + + I L + + +
Sbjct: 59 ILLVFPARTQNIGGIGRKQFSLNEIKALNLQIAHLARAIAPLSSTSALAQFHKENTQTQI 118
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
S + + + + + +P G +
Sbjct: 119 QGIDSAYFLATNWAITSGREFEASDYRAGSNVCIIGKSVQKNLFDKSSTNPLGSRIKLNN 178
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN---AVSGIEVFVKDPDAIEK 239
+ + + + + ++ + L+ Q + +S I + +KD +
Sbjct: 179 IVCECIGILEEKGQGAMGNDQDDVILLPLKTYQRSILKSSSLYNISRIMISLKDNVDSTQ 238
Query: 240 THENIVRILGNGVVVID 256
I L +
Sbjct: 239 ALAQITDTLRQIRNIRS 255
>gi|225166439|ref|ZP_03728095.1| protein of unknown function DUF214 [Opitutaceae bacterium TAV2]
gi|224799318|gb|EEG17889.1| protein of unknown function DUF214 [Opitutaceae bacterium TAV2]
Length = 214
Score = 45.1 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +A R+L + ++ A +S G++ GV I+ + GF IK +L
Sbjct: 1 MSTNLS--IALRFLGARKR------AMLMSLAGIIFGVAFFILTQAQTAGFEAYFIKTIL 52
Query: 63 GIN 65
G+N
Sbjct: 53 GVN 55
>gi|307692404|ref|ZP_07634641.1| hypothetical protein RbacD_05433 [Ruminococcaceae bacterium D16]
Length = 417
Score = 45.1 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 27/255 (10%), Positives = 67/255 (26%), Gaps = 19/255 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNG--------FREDMIK 59
+A++ + + +F ++ +G++IGV ++++++SV+ G F +
Sbjct: 6 AFKMAFKSISCKKTRSF------LTMLGIIIGVASVVIMVSVVQGQNQKSMEYFEKMGTN 59
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFI----PDVIKVLPFVSGQAFVSGLSSGGSG 115
++ Y + I PD+ + +
Sbjct: 60 KINVRAYSFSDMNNETSQKLYDYCLTLNHLIDGITPDMEIGQKLTIQYGAKTIAVNDWEN 119
Query: 116 VLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYG 175
+ L + N + R + + + G K + +
Sbjct: 120 SQNMSWEDMMHVKLGSDQYGVCNNYTLAAGRELSYLDIEKTNPVCVLGAGAKEKLFNFID 179
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDN-GMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
V V M + + + N + + V K
Sbjct: 180 PVGETITINGQPFLVVGWYNSMALEGWPELDNLIVLPYTFNRSLNQNSNIDTYVVKAKSA 239
Query: 235 DAIEKTHENIVRILG 249
A + + L
Sbjct: 240 SATTEALTLLDAYLS 254
>gi|40062675|gb|AAR37588.1| permease, putative [uncultured marine bacterium 314]
Length = 406
Score = 45.1 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 38/265 (14%), Positives = 76/265 (28%), Gaps = 13/265 (4%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M I V+WR L+ N + ++ V I + LI+ S++ G E
Sbjct: 1 MKII-----KVSWRNLWRNPIR------TNMTISAVAICIAILIIFQSMIVGLIEKAEFN 49
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKV-LPFVSGQAFVSGLSSGGSGVLVR 119
+ V L D + + + G S
Sbjct: 50 TTNLIIGEVQVHAEGYLDDRSIYKSLKNIEEIHSVAKENNIGLVERSYGFGLISSETKSA 109
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
G + + N + + + K + S V
Sbjct: 110 GTQFWGINPESELQYFDFANHIDKGNFLTNTSLKKIVLGKKLASSIAADIGTELVVFVQG 169
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+ ++ + V G+ + + D G + ++ + F++ N + I + K E+
Sbjct: 170 ADGSLGNELFYVSGILKNVADNIDRGAAMILREDFDILFSVNNLIHEIALNSKGRLESEE 229
Query: 240 THENIVRILGNGVVVIDWQQRYQIF 264
+ + GV + WQQ
Sbjct: 230 IQKLVSAKT-TGVDIETWQQLMPTI 253
>gi|42527356|ref|NP_972454.1| ABC transporter, permease protein, putative [Treponema denticola
ATCC 35405]
gi|41817941|gb|AAS12365.1| ABC transporter, permease protein, putative [Treponema denticola
ATCC 35405]
gi|325474374|gb|EGC77562.1| ABC transporter [Treponema denticola F0402]
Length = 444
Score = 45.1 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 25/257 (9%), Positives = 69/257 (26%), Gaps = 15/257 (5%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI-NGH 67
+ +A+R L ++ S + + +I + + +G M + I GH
Sbjct: 4 LKIAFRNLNRQKRR------SILLVFAIAFAFFVVIFMDGMTSGAVNSMAGEISKIVGGH 57
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
V I ++ + ++ + + + +
Sbjct: 58 VYIIGSKKAPDKSADDPAQIYMDKNDVEFIEKTVKELGIETTYIIKRSRASGKLIFEGKE 117
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT-------PM 180
+ D + + + + + D+
Sbjct: 118 VTSQIDGCKFDEEKILHDSILFKEGSWEAMKKENAILLSESVAATLNVDLHDIVLLETRT 177
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEK 239
G + + + + Y++ Q LE +++ +F+K+PD E
Sbjct: 178 SQGQLTVIELQVEGIAVNRSSFGGITNYINFDYLQKITELEKDSIEVYSLFLKNPDMQEI 237
Query: 240 THENIVRILGNGVVVID 256
+ + R + +
Sbjct: 238 YAQQLERKIAETHPITS 254
>gi|160934242|ref|ZP_02081629.1| hypothetical protein CLOLEP_03113 [Clostridium leptum DSM 753]
gi|156866915|gb|EDO60287.1| hypothetical protein CLOLEP_03113 [Clostridium leptum DSM 753]
Length = 395
Score = 45.1 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 31/241 (12%), Positives = 71/241 (29%), Gaps = 11/241 (4%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMN-GFR---EDMIKRVLGINGH 67
A + L + S ++ +G+ IGV ++I++ ++ G + ++ LG
Sbjct: 8 AAKNLGRKKLR------SSLTILGITIGVASVILIGNIGQCGTQAVNAEVNSLGLGGLTI 61
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
Q+ + V + P + + + ++ + +
Sbjct: 62 SAGSQEGGEAGLTLEDLKTIRKTASVEEAAPVIMQNTKIGYRNEQMDALVWGIDTKASQV 121
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ + ++ ++ AR +S + +
Sbjct: 122 ISLQVLYGRSISNGDVNTCANVCMVDQNFARAAYNRDNIVGKHISVLYNGIQENFEVVGV 181
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
T G+ DY VY+ Q N I V V+ ++ + IV
Sbjct: 182 IKTGSGLLSNIIGDYIPNFVYVPYSTLQHTTG-NNYFDQIAVRVEAGSDADEIGQTIVNT 240
Query: 248 L 248
L
Sbjct: 241 L 241
>gi|150403703|ref|YP_001330997.1| hypothetical protein MmarC7_1792 [Methanococcus maripaludis C7]
gi|150034733|gb|ABR66846.1| protein of unknown function DUF214 [Methanococcus maripaludis C7]
Length = 397
Score = 45.1 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 34/251 (13%), Positives = 78/251 (31%), Gaps = 11/251 (4%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M I A + + + S ++ IG++IG++A++ ++S+ G + +
Sbjct: 1 MKIKDIISF--AGQNIIQKKTQ------STLTIIGIVIGILAIVSLISLGYGVQNYIKSE 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + V+ N D I+ + + S
Sbjct: 53 ITTVGASVISILPSKDFGGPSAGKNFNDRDVSAIENIRGIDEVLPAWFGSYLIEYSD--Q 110
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ S + + + ++ +G I + + I N D+
Sbjct: 111 KYYGSILAINPSIYQKIYSQTWGYELYRGRWIENNDKYSCMIGYTLATNSFDREIDIGDK 170
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
K + + P D+ +V S F +++ + I V VK + +
Sbjct: 171 ITINDKKYKVIGILEETGNPRDDDAVVL-SYDMGSELFEIDDEYNVITVVVKSGENVISI 229
Query: 241 HENIVRILGNG 251
+ I L +
Sbjct: 230 ADIIEEELEDS 240
>gi|30249852|ref|NP_841922.1| hypothetical protein NE1900 [Nitrosomonas europaea ATCC 19718]
gi|30180889|emb|CAD85811.1| DUF214 [Nitrosomonas europaea ATCC 19718]
Length = 407
Score = 45.1 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 33/252 (13%), Positives = 82/252 (32%), Gaps = 14/252 (5%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A R L +NR + ++ +G++IGV A+++++S+ G + + + + H++I
Sbjct: 10 ATRALQTNRLR------TALTMLGMIIGVAAVVLMLSIGQGAQTSINSAIASMGSHLLIV 63
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
+ V + + +N+ + L
Sbjct: 64 MPGATSSGGLRWGSGSVKTLTVQDAHAIAELPMVDATAPVISGTAQLNYGANNWSTVLTG 123
Query: 132 SFSRFYGNVSNDF-----DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
++ + + + G +A I+ P G + + +
Sbjct: 124 VTPDYFSVNNWEMADGEIFTEGDLRSGTRVAVLGQITANSLFGNEDPVGKIVRIANRPFT 183
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF---NLENAVSGIEVFVKDPDAIEKTHEN 243
++ + + V++ L AQ +++ + V K D++E
Sbjct: 184 VVGVLVAKGQSLSGRDQDDNVFIPLTTAQRQIIGNQFPGSINHMTVRAKTADSMEAAEAE 243
Query: 244 IVRILGNGVVVI 255
I R+L +
Sbjct: 244 ITRLLRQRHRIS 255
>gi|229578745|ref|YP_002837143.1| protein of unknown function DUF214 [Sulfolobus islandicus
Y.G.57.14]
gi|228009459|gb|ACP45221.1| protein of unknown function DUF214 [Sulfolobus islandicus
Y.G.57.14]
Length = 414
Score = 45.1 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 38/260 (14%), Positives = 90/260 (34%), Gaps = 16/260 (6%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++F + ++++ L S + I + ++ I V+IGV ++ +++ G + ++
Sbjct: 1 MNLFD--ILWLSYKGLISRK------IIAILAIISVVIGVASVTTLVAFTQGVGQSILSV 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
V + ++ + Q ++ +P V V VSG ++ ++
Sbjct: 53 VESLGPKTILILPSRGSLLTQATVATIESLPGVEAVYGVVSGFGTINVEGQPIDVTIIGV 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ S S + G + +A ++ S
Sbjct: 113 NNLSAILGQVLLESGSTYPPITSPEAVIGSEVANPVAGVY-------FSVGSEITIQISR 165
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
G + + +L +++ L EA N + + + + V + + +
Sbjct: 166 GNSVNLEVVGILSPSGANPLSNSETSIFIPLGEAMAILN-KTSYNELIVEAQSVNDVNTI 224
Query: 241 HENIVRILGNGVVVIDWQQR 260
I I GN + V+ QQ
Sbjct: 225 ATIIEDIYGNQLNVVTVQQL 244
>gi|294670333|ref|ZP_06735216.1| hypothetical protein NEIELOOT_02052 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307937|gb|EFE49180.1| hypothetical protein NEIELOOT_02052 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 645
Score = 45.1 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 32/246 (13%), Positives = 80/246 (32%), Gaps = 5/246 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG + ++ + + + + D + +
Sbjct: 269 SLLTMLGIIIGIASVVSVVALGNGSEKKILADISAMGTNTISIFPGRGFGDRRSGRIKTL 328
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I D + + +SGG+ + + + G
Sbjct: 329 TIDDAKVIAKQSYVASATPQTTSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLESGRLFD 388
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ +D + K + D + R + TV+G+ + + N V
Sbjct: 389 ESDVKEDAQVVVIDQ-NTKNKLFGTDTDPLGKTVLFRKRPLTVIGVMKKEENSFGNADVL 447
Query: 209 MSLQEAQLYFNL---ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQ-IF 264
M + E+ + I V +KD + + + +L D+
Sbjct: 448 MLWSPYTTVMHQITGESHTNSITVKIKDDANTQVAEKGLTELLKTRHGTEDFFMNNSDSI 507
Query: 265 FSCYES 270
E+
Sbjct: 508 KQMVET 513
>gi|21227049|ref|NP_632971.1| hypothetical protein MM_0947 [Methanosarcina mazei Go1]
gi|20905372|gb|AAM30643.1| conserved protein [Methanosarcina mazei Go1]
Length = 401
Score = 45.1 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 28/228 (12%), Positives = 68/228 (29%), Gaps = 1/228 (0%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ A++ +S+ F + + + +I P + Y ++
Sbjct: 19 SGLTTLGIVIGIAAVVANISLGESFNVFFEEEISAQGSNFIIIYSQEPNLFYSNELQIIE 78
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
P + V P V+ S + + + + + S + + + F
Sbjct: 79 KTPGISGVSPIKQQLGEVTYFSQNKNIDIAGVTGDYEDTANIVMESGSFISDQDTFSAAI 138
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
G I + + L G T L + ++
Sbjct: 139 GSEIANEKFDRSISARSSIDVTLRLEGGRTVTRTFKVKGVVESLNASFTGGGIDRDVTIF 198
Query: 209 MSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
+ + E+ S + +E+ + + L V
Sbjct: 199 VPVSTINQMLE-EDDFSAFFAMSDSLEDVEEVSDEVDERLARNFGVSS 245
>gi|291296523|ref|YP_003507921.1| hypothetical protein Mrub_2147 [Meiothermus ruber DSM 1279]
gi|290471482|gb|ADD28901.1| protein of unknown function DUF214 [Meiothermus ruber DSM 1279]
Length = 419
Score = 45.1 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 27/260 (10%), Positives = 73/260 (28%), Gaps = 15/260 (5%)
Query: 1 MSIFSRFE-VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMN----GFRE 55
M + + E +A+ L+ N+ +F ++ +G++IGV A+ ++S+ G +
Sbjct: 15 MGM-NPLENFRMAFESLWGNKLRSF------LALLGIVIGVFAVTAMISLGQMATAGITQ 67
Query: 56 DMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSG 115
D+ + + + + + + + G
Sbjct: 68 DLEAIAGRSIFVQPNFNEGQDFSTAPIRQEDILALQTLPAAVIPQLFTSAQYEVRPGTRR 127
Query: 116 VLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYG 175
+ + D L + G ++ + G+ + R + +
Sbjct: 128 SIQLQGTPGDLPRLDPTNKLAKGRYFSEAEARGGLAVAVLSDRAARDLFPGREAVGQVAR 187
Query: 176 DVTPMG-MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF--NLENAVSGIEVFVK 232
P G + + + VY+ + + + + +K
Sbjct: 188 LYYPNGARLELTVVGVLQPPGGLFGGLGAAATVYVPNELIWNTSPTARKGQYDFVVLSLK 247
Query: 233 DPDAIEKTHENIVRILGNGV 252
+ + RI
Sbjct: 248 KGADARQVTRQVQRIFEGRY 267
>gi|301130396|gb|ADK62197.1| putative transport system ATP-binding protein EtsB [Salmonella
enterica subsp. enterica serovar Kentucky]
gi|301130525|gb|ADK62325.1| putative transport system ATP-binding protein EtsB [Salmonella
enterica subsp. enterica serovar Kentucky]
Length = 611
Score = 45.1 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 32/253 (12%), Positives = 86/253 (33%), Gaps = 10/253 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK--RVLGIN 65
+ +A + + ++R + ++ IG++ G+ +++ V+++ G R++ ++ + LG N
Sbjct: 221 SMQMALKAMKTHRLR------TTLTMIGIVFGIASVVTVVALGEGARQETLEEIKSLGTN 274
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+ + + I + + + F+ + S + I++ +
Sbjct: 275 VVSIYPGQDLFDDSIESIRTLVPADANALAKQGFIDSVSPEVSASDNIRFLGKSAIASIN 334
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
++ + + R + + + L G + +G
Sbjct: 335 GVGREHFRVKGIELLQGTTFRDDRNALQEVIIDENTRKAIFDNTGLQALGQIVFLGSVPA 394
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
R + V+M + ++GI V +KD E I
Sbjct: 395 RVVGIAKSNNRSDASNRIT--VWMPYSTVMYRIVGKPVLTGISVRLKDNVDNEAAISAIS 452
Query: 246 RILGNGVVVIDWQ 258
++L + D+Q
Sbjct: 453 QLLTRRHGIKDFQ 465
>gi|239994239|ref|ZP_04714763.1| lipoprotein releasing system transmembrane protein LolE
[Alteromonas macleodii ATCC 27126]
Length = 209
Score = 45.1 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 10/65 (15%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Query: 207 VYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHENIVRILGNGVV-VIDWQQRYQIF 264
+YM+L++ + + +F+ D + + +G V + W++R
Sbjct: 3 MYMNLKDVNRLMRDPKGSEQSLRLFLNDAFNYQAVVSALTDRVGVSVNNMKTWRERQGPL 62
Query: 265 FSCYE 269
F +
Sbjct: 63 FDAVK 67
>gi|332160339|ref|YP_004296916.1| ABC transporter, ATP-binding component [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|318604428|emb|CBY25926.1| macrolide export ATP-binding/permease protein MacB [Yersinia
enterocolitica subsp. palearctica Y11]
gi|325664569|gb|ADZ41213.1| ABC transporter, ATP-binding component [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
Length = 658
Score = 45.1 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 37/276 (13%), Positives = 86/276 (31%), Gaps = 33/276 (11%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +R + +S +G++IG+ +++ M+V G R++++ + +
Sbjct: 269 AIKMAWRALLGHRIR------ALLSMLGIIIGISSVVSSMAVGEGARQEILNEISQLGTS 322
Query: 68 ---------VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
+ + Q L P V + P VS L
Sbjct: 323 NLDIRPGLGWDKPRPDFERALSQADIELLSQQPYVDSLSPVVSKIVAAVRGDKQVMVSLS 382
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
N S+ R VI+ +L+ L + + + + +
Sbjct: 383 GVSHGFFQVKGLNFSVGDGFTQSHVTAREPVVILQPELSDTLFAAGQNPLGEIVQLDGIP 442
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+G+ + + G + Y + +S Q I V V++ +
Sbjct: 443 LRVIGVAKRGGSSFGGLLAAWMPYTSLTERISGDIPQE---------SITVRVREGYNLN 493
Query: 239 KTHENIVRILGN-----GVVVIDWQQRYQIFFSCYE 269
++ ++L + ++ +
Sbjct: 494 NVQRDVEKLLESAHGQRDFFILS----NDQMSKAIQ 525
>gi|159904800|ref|YP_001548462.1| hypothetical protein MmarC6_0410 [Methanococcus maripaludis C6]
gi|159886293|gb|ABX01230.1| protein of unknown function DUF214 [Methanococcus maripaludis C6]
Length = 397
Score = 45.1 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 33/223 (14%), Positives = 73/223 (32%), Gaps = 3/223 (1%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ IG++IG++A++ ++S+ G + + + I +V+ N D
Sbjct: 21 STLTIIGIVIGILAIVSLISLGYGVQNYIKSEITTIGANVISILPSKDFGGPAAGKNFND 80
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I+ + + S + S + + ++ K
Sbjct: 81 GDIKAIENIRGIDEVLPAWFGSYLIEYSD--QKYYGSILAINPSKYQNIYTQTWGYEPYK 138
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
G I + + I + D+ K + + P D+ +V
Sbjct: 139 GRWIENNDKYSCMIGYTLATDSFDREIDIGDKITINDKKYKVIGILEETGNPRDDDAVVL 198
Query: 209 MSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNG 251
S A+ F ++N + I V V + + + I L +
Sbjct: 199 -SYDIAKEIFEIDNEYNVITVSVNSGEDVISIADKIEEELEDS 240
>gi|229551138|ref|ZP_04439863.1| ABC superfamily ATP binding cassette transporter, membrane
protein [Lactobacillus rhamnosus LMS2-1]
gi|258541076|ref|YP_003175575.1| antimicrobial peptide ABC transporter permease [Lactobacillus
rhamnosus Lc 705]
gi|229315430|gb|EEN81403.1| ABC superfamily ATP binding cassette transporter, membrane
protein [Lactobacillus rhamnosus LMS2-1]
gi|257152752|emb|CAR91724.1| ABC transporter, antimicrobial peptide transporter permease
component [Lactobacillus rhamnosus Lc 705]
Length = 397
Score = 45.1 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFRE 55
+ +++R L +N++ +F ++ +G++IG+ +++ ++S+ NG +
Sbjct: 7 IRISFRALAANKRRSF------LTMLGIIIGIASVVTILSLGNGIKA 47
>gi|199598259|ref|ZP_03211680.1| ABC-type antimicrobial peptide transport system, permease
component [Lactobacillus rhamnosus HN001]
gi|258509916|ref|YP_003172667.1| antimicrobial peptide ABC transporter permease [Lactobacillus
rhamnosus GG]
gi|199590862|gb|EDY98947.1| ABC-type antimicrobial peptide transport system, permease
component [Lactobacillus rhamnosus HN001]
gi|257149843|emb|CAR88816.1| ABC transporter, antimicrobial peptide transporter permease
component [Lactobacillus rhamnosus GG]
gi|259651178|dbj|BAI43340.1| antimicrobial peptide ABC transporter permease component
[Lactobacillus rhamnosus GG]
Length = 397
Score = 45.1 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFRE 55
+ +++R L +N++ +F ++ +G++IG+ +++ ++S+ NG +
Sbjct: 7 IRISFRALAANKRRSF------LTMLGIIIGIASVVTILSLGNGIKA 47
>gi|325289758|ref|YP_004265939.1| protein of unknown function DUF214 [Syntrophobotulus glycolicus
DSM 8271]
gi|324965159|gb|ADY55938.1| protein of unknown function DUF214 [Syntrophobotulus glycolicus
DSM 8271]
Length = 409
Score = 45.1 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
V ++ R L SN+ S ++ +G++IGV A+I ++ + NG D+ + G+ +
Sbjct: 6 SVKISLRALISNKLR------SILTMLGIIIGVGAVIAMVGIGNGATSDITSSIQGLGAN 59
>gi|298293864|ref|YP_003695803.1| ABC transporter [Starkeya novella DSM 506]
gi|296930375|gb|ADH91184.1| ABC transporter related protein [Starkeya novella DSM 506]
Length = 668
Score = 45.1 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 34/250 (13%), Positives = 84/250 (33%), Gaps = 9/250 (3%)
Query: 27 IASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANR 86
+ ++ +G++IGV ++I +++V +G + +++R+ I +++I + +
Sbjct: 293 FRTALTLLGIVIGVGSVITMLAVGDGGKASVLERISQIGTNLLIVRPGAAGIRSSGDNAT 352
Query: 87 LDFIP----DVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSN 142
L I + V+ + GS ++ + YL V
Sbjct: 353 LLPEDAEALRAIPGINAVAPERSSRFTMRFGSEDYFTTVTGTSADYLTARDWAMAEGVMF 412
Query: 143 DFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDY 202
+ L + + ++ + P G + + F
Sbjct: 413 SPADVRAYAPVVVLGQTVVRNLFGE---DDPLGRHVLVKNVPYQVIGVLSARGANAFGQD 469
Query: 203 DNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQ 262
+ + + L + ++ + V V++ I + I RI+ D+Q R
Sbjct: 470 QDDVALVPLSTGFVRVFGRQFLNSVTVKVQEAADIPRVESAITRIIAERHQAEDFQVRNT 529
Query: 263 IFF--SCYES 270
F + E+
Sbjct: 530 AQFLETAVET 539
>gi|261365565|ref|ZP_05978448.1| macrolide export ATP-binding/permease protein MacB [Neisseria
mucosa ATCC 25996]
gi|288565998|gb|EFC87558.1| macrolide export ATP-binding/permease protein MacB [Neisseria
mucosa ATCC 25996]
Length = 645
Score = 45.1 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 31/246 (12%), Positives = 79/246 (32%), Gaps = 5/246 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG + ++ + + + + D + +
Sbjct: 269 SLLTMLGIIIGIASVVSVVALGNGSEKKILADINAMGTNTISIFPGRGFGDRRSGRIKTL 328
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I D + + +SGG+ + + + G
Sbjct: 329 TIDDAKVIAKQSYVASATPQTTSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLESGRLFD 388
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ +D + K + D + + + TV+G+ + N V
Sbjct: 389 EADVKEDAQVVVIDQ-NTKEKLFGTDVDPLGKTVLFKKRPLTVIGVMEKEENSFGNSDVL 447
Query: 209 MSLQEAQLYFNL---ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQ-IF 264
M + E+ + I V +KD + + + +L D+
Sbjct: 448 MLWSPYTTVMHQITGESYTNSITVKIKDDANTQVAEKGLTELLKTRHGTEDFFMNNSDSI 507
Query: 265 FSCYES 270
E+
Sbjct: 508 KQMVET 513
>gi|196228227|ref|ZP_03127094.1| protein of unknown function DUF214 [Chthoniobacter flavus Ellin428]
gi|196227630|gb|EDY22133.1| protein of unknown function DUF214 [Chthoniobacter flavus Ellin428]
Length = 1221
Score = 45.1 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 29/273 (10%), Positives = 80/273 (29%), Gaps = 22/273 (8%)
Query: 3 IFSRFEVIVAW---RYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +F I W R+L +R + + ++ + V +GV + + + N +
Sbjct: 1 MLRQFPRIFLWHVVRHLQRHR------LLAVLNVLSVALGVAVYLAIQ-IAN---HSASR 50
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
V + + D L +K + + G ++
Sbjct: 51 SFAAGIDLVAGKAQLEVRGDVDETLWPLVAHQPGVKAVTGLVEGKITFPDWPGEYLQVLG 110
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + ++ + + G+G + + +
Sbjct: 111 VDLLTGEPFRTFDINQQGNSPPLEQWMGEGGQLAV------QTEFARRHGLRIGDHLRVL 164
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+ I++ + R M + AQ F + +S ++ + D ++
Sbjct: 165 VNSEIKNATVAAFLNSRDEAAAMPANFAVMDIGWAQELFGRQGHLSSLQFLLDDASQAKR 224
Query: 240 THENIVRILGNGVVVIDWQQRY---QIFFSCYE 269
+ ++L + +QR + S ++
Sbjct: 225 VAAQLNQLLPPSLHAAPPRQRSYQIESMLSAFQ 257
>gi|307717922|ref|YP_003873454.1| permease involved in lipoprotein release [Spirochaeta thermophila
DSM 6192]
gi|306531647|gb|ADN01181.1| putative permease involved in lipoprotein release [Spirochaeta
thermophila DSM 6192]
Length = 417
Score = 45.1 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 32/281 (11%), Positives = 77/281 (27%), Gaps = 37/281 (13%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+AWR +F NR+ S +S + + I M+L+++ +++ ++D + +
Sbjct: 6 IAWRNIFRNRRR------SLLSVLALAIAAMSLVLLFGLIDWMKDDFRTNLFRFYTGQIR 59
Query: 71 QQKYYPLVDYQFIANR------------LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
+ ++ IP V + A V GV
Sbjct: 60 IRDREFDTYEHLSPLHLKVEHALDLVEKIEQIPGVRAAAARIGFPAMVLEEEGTFLGVYG 119
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
R + + N +++ ++ + +
Sbjct: 120 RAMDMEQERKVANLDEYLLTGEF-------PKAGSREILLTPSLAEELGKQVGDTLTLMA 172
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-------NAVSGIEVFV 231
+ + + ++ L Q + +A S + V +
Sbjct: 173 RTATYGTNAMTFTITGLVRFPFSSLDRAFFIPLDTGQRLLRMRSQDGSTFDAASEVVVLL 232
Query: 232 KDPDAIEKTHENIVRILGN----GVVVIDWQQRYQIFFSCY 268
++ +I +L V WQ+ +S
Sbjct: 233 EEGVKERDVLPHIQSLLATGSYGDVEARPWQEL-PTLYSVI 272
>gi|315428029|dbj|BAJ49617.1| conserved hypothetical protein [Candidatus Caldiarchaeum
subterraneum]
Length = 413
Score = 45.1 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 30/251 (11%), Positives = 75/251 (29%), Gaps = 11/251 (4%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AW L R + ++ +G+++G + + + G + ++ + +V+
Sbjct: 10 AWSALKDRRLR------TTLTVLGIVVGPALITALNATTAGLTQSIVSNLEVFGTDLVLV 63
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
Q+ + N + + V + P+ + + L++
Sbjct: 64 QRVGDFNFDDNVVNYISSLQGVKETYPYYLIASGEIKTRGKTFPMDPTKSYTVLAVELRD 123
Query: 132 SFSRFYGNVSNDFDRGKG----VIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
F + V+ + + ++ G
Sbjct: 124 LPKLFPNIKVDSGAIVDNPSAAVVGYNAWNPRDPDLPPIDVGSIFTVTPLSGTGTTRSFT 183
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
LG + + +++S + +L N + SG+ V + DP ++ I +
Sbjct: 184 VTARLGKYGQSLFLNPDNQIFVSPEAGRLITNRR-SYSGVFVKLTDPGYSDQVVLAIEQK 242
Query: 248 LGNGVVVIDWQ 258
G V V
Sbjct: 243 YGGDVRVFSIT 253
>gi|315425106|dbj|BAJ46778.1| hypothetical conserved protein [Candidatus Caldiarchaeum
subterraneum]
Length = 416
Score = 45.1 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 30/251 (11%), Positives = 75/251 (29%), Gaps = 11/251 (4%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AW L R + ++ +G+++G + + + G + ++ + +V+
Sbjct: 13 AWSALKDRRLR------TTLTVLGIVVGPALITALNATTAGLTQSIVSNLEVFGTDLVLV 66
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
Q+ + N + + V + P+ + + L++
Sbjct: 67 QRVGDFNFDDNVVNYISSLQGVKETYPYYLIASGEIKTRGKTFPMDPTKSYTVLAVELRD 126
Query: 132 SFSRFYGNVSNDFDRGKG----VIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
F + V+ + + ++ G
Sbjct: 127 LPKLFPNIKVDSGAIVDNPSAAVVGYNAWNPRDPDLPPIDVGSIFTVTPLSGTGTTRSFT 186
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
LG + + +++S + +L N + SG+ V + DP ++ I +
Sbjct: 187 VTARLGKYGQSLFLNPDNQIFVSPEAGRLITNRR-SYSGVFVKLTDPGYSDQVVLAIEQK 245
Query: 248 LGNGVVVIDWQ 258
G V V
Sbjct: 246 YGGDVRVFSIT 256
>gi|312889422|ref|ZP_07748975.1| protein of unknown function DUF214 [Mucilaginibacter paludis DSM
18603]
gi|311298117|gb|EFQ75233.1| protein of unknown function DUF214 [Mucilaginibacter paludis DSM
18603]
Length = 413
Score = 45.1 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 34/277 (12%), Positives = 82/277 (29%), Gaps = 29/277 (10%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A +L S K + ++ +GV G+ I + S M+G + HV
Sbjct: 6 FKIAQVHLTSKVKQ------TMVALLGVTFGISMYIFMNSFMSGVNDTQTVLAFTSLAHV 59
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
I I+ + + ++ S V +
Sbjct: 60 HIYNDGPADNSNLVKKVYPANTLANIRDAKVIQYVTGIKNTAAIVSLVRKQPEVTGITPQ 119
Query: 129 LQNSFSRFYGNVS----------NDFDRGKGVIIGKDLARNLGISIG----------DKI 168
+ + G + ++ + + R + K
Sbjct: 120 VNINIFFRNGGNKLNGTLSGVDVENENKLFNISSYMTVGRWDNLKYRPDGIILGADLAKE 179
Query: 169 NILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLENAVSGI 227
++ ++ + S +Y ++G+F+ D Y+++ A+ + V+ +
Sbjct: 180 LSVNLDDNINILTSDGVSHNYKLIGLFQTNVKQVDKSKGYINISAARQLLAENQEYVTDL 239
Query: 228 EVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIF 264
++ V++ + I ++ V WQ Q
Sbjct: 240 QINVQNYEETGPLVSRIAPVVP--YKVESWQTSNQQL 274
>gi|299136087|ref|ZP_07029271.1| protein of unknown function DUF214 [Acidobacterium sp. MP5ACTX8]
gi|298602211|gb|EFI58365.1| protein of unknown function DUF214 [Acidobacterium sp. MP5ACTX8]
Length = 408
Score = 45.1 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ ++ + +A + L++N+ + ++ +GV+IGV ++I V++++NG + +V
Sbjct: 1 METKEALRIALQSLWANKLR------TILTLLGVVIGVASVIAVVTLVNGANVYVATKVN 54
Query: 63 GINGHVV 69
G V
Sbjct: 55 GYGADVF 61
>gi|190149941|ref|YP_001968466.1| macrolide-specific ABC-type efflux carrier [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|189915072|gb|ACE61324.1| putative macrolide-specific ABC-type efflux carrier [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
Length = 675
Score = 45.1 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 22/241 (9%), Positives = 77/241 (31%), Gaps = 7/241 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + +++ + ++ +G++IG+ ++I V+++ G ++ ++ + + +
Sbjct: 287 SFKMAINAITAHKLR------ALLTMLGIVIGITSVISVVALGQGSQQQILSNINSLGTN 340
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + + I D + + + + G+ + + +
Sbjct: 341 TMTIMNGTGFGDRRANLTKNLTISDAMMLNKQQFVDSTTPSSNLSGTVIYGNTNVTASIN 400
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ F G + + K ++ + + +
Sbjct: 401 GVGEQFVNVKGLKMISGRFFDADEVKLSSQVVVIDGNTKK-DLGLTDPVEGKVILVDKKP 459
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ + + ++M + E + + V VKD + ++I +
Sbjct: 460 LTVIGMAQESNNLNQTSLKMWMPYTTLMQRISGEKFIDSLTVKVKDNVESQTAEKSINEL 519
Query: 248 L 248
L
Sbjct: 520 L 520
>gi|15678722|ref|NP_275838.1| hypothetical protein MTH695 [Methanothermobacter thermautotrophicus
str. Delta H]
gi|2621781|gb|AAB85200.1| conserved protein [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 370
Score = 45.1 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 28/252 (11%), Positives = 72/252 (28%), Gaps = 24/252 (9%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+ + F +R S ++ G+ IG+ ++ + + G + +
Sbjct: 6 LVLKNPFRSRAR------SLLAITGIAIGIATIVTLGVITEGLKTSTEDTLKAGGADFT- 58
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
+ + + + G V +
Sbjct: 59 ----------------IVESNVSDMFFSKIDEEYVDRVRNVSGVEDAVGILMAVQPLDDN 102
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
F + + + G+ L + +G + I+++ Y
Sbjct: 103 PYFVLIGIDPAKINMSQIKITEGRTLQDPDADEVIMGKVASENHGKKVGDTIKIKNREYR 162
Query: 191 VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN 250
V+G+F D ++SL++ Q + E ++ I V + A+E + I + +
Sbjct: 163 VVGIFESGDMQQD-SGAFISLKKLQRIEDKEGKLTMIYVKMTRNSAVEDVTDRIEKRYSD 221
Query: 251 GVVVIDWQQRYQ 262
+ +
Sbjct: 222 LTTIASLEDLQS 233
>gi|237807069|ref|YP_002891509.1| ABC transporter-like protein [Tolumonas auensis DSM 9187]
gi|237499330|gb|ACQ91923.1| ABC transporter related [Tolumonas auensis DSM 9187]
Length = 659
Score = 45.1 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 32/265 (12%), Positives = 90/265 (33%), Gaps = 11/265 (4%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+AW + ++R + ++ +G++IG+ A++ V++V G R +I + + +
Sbjct: 269 AFRMAWISMLTHRMR------TLLTMLGIIIGITAVVSVVAVGQGARNKVISDISSMGTN 322
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D A + D+ + + + +S+ +
Sbjct: 323 TIDVYPGKDWGDRNASAIQTLTPQDLPLLSGQIYTDSVTPNVSTNALLRDGGQALKAMVY 382
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ + + + + L + I +I + + + + + +
Sbjct: 383 GVAGQYFQVKDLQMVFGKAFDQRAVEQ-LEPVVVIDHNTRIKLYGEHINPVGKVILLNNL 441
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA--VSGIEVFVKDPDAIEKTHENIV 245
++G+ + +D + L + L S + V +KD + + I+
Sbjct: 442 PCRIIGVTAEKKSSFDTQNLNAWLPYTSAMYRLMGQHYFSSVSVRIKDGVSSGIAEQQII 501
Query: 246 RILGNGVVVIDWQQRYQIFFSCYES 270
++L D+ R S ++
Sbjct: 502 KLLTRAHGRKDFYTRNSD--SILQT 524
>gi|152975907|ref|YP_001375424.1| hypothetical protein Bcer98_2177 [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152024659|gb|ABS22429.1| protein of unknown function DUF214 [Bacillus cytotoxicus NVH
391-98]
Length = 856
Score = 45.1 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 36/258 (13%), Positives = 77/258 (29%), Gaps = 7/258 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
IF R E ++ R + NR+ A IS+ + ISF G M+ ++ + + S+ G ++ + + +
Sbjct: 454 IFFRIETSISSRNVIRNRQKAAISV-AIISF-GFMLALVGSMYMNSMKEGMKQGIKESMP 511
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGG-----SGVL 117
+ ++ I V V+ +
Sbjct: 512 SDLVIRIPMLMRGNEYIPFEWLEKVKQIEGVKDVVAIATDTQSQLVDYDFKKSDPEWYDY 571
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
+R + + + + G + + L GI + L +
Sbjct: 572 MRKQNIDFKNIEVSGVDLVEFSKIKKIKVVSGKSLQEPLKNGEGIISKKTADYLGIKLND 631
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
K + + N + +E IE+ + I
Sbjct: 632 KIKIQSQNHKPQFIKITSILEKNLQMNTRAVLVNEEWGKKNFHIKGYESIEIMIDPHKNI 691
Query: 238 EKTHENIVRILGNGVVVI 255
+ I R++ NG +
Sbjct: 692 NSIEQKINRVIKNGANIE 709
>gi|116748524|ref|YP_845211.1| hypothetical protein Sfum_1082 [Syntrophobacter fumaroxidans MPOB]
gi|116697588|gb|ABK16776.1| protein of unknown function DUF214 [Syntrophobacter fumaroxidans
MPOB]
Length = 456
Score = 45.1 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 55/132 (41%), Gaps = 6/132 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+++A+R + N S ++ +G++IGV A+IV++++ G + +++ + ++
Sbjct: 19 LLLAFREIRRNVMR------SVLTILGIVIGVAAVIVMVTIGGGATVQVKQQIASMGSNL 72
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
++ L Q + D + V+ V+ LS+ + + + S
Sbjct: 73 LMVTPGKRLGPGQSTGSIPFKESDAAAIAREVNAVKAVAPLSTQSAKAVFGNQNWSTQVA 132
Query: 129 LQNSFSRFYGNV 140
N+ N
Sbjct: 133 GSNNRYLQVTNR 144
>gi|88800941|ref|ZP_01116493.1| hypothetical protein MED297_04704 [Reinekea sp. MED297]
gi|88776316|gb|EAR07539.1| hypothetical protein MED297_04704 [Reinekea sp. MED297]
Length = 405
Score = 45.1 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 28/269 (10%), Positives = 80/269 (29%), Gaps = 15/269 (5%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ + W+ L NR+ + + + V +GV ++ + + + + NG +
Sbjct: 4 LKLGWQNLGRNRRR------TVATLLLVAMGVAGIMTTTGFARYTYDSLQEFAMRENGQL 57
Query: 69 VIQQKYYPLVDYQFI-------ANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
++ Y + + + + + +V +GL + G +
Sbjct: 58 ILSHPDYFEREEAYPLELGLAEYDAIRQQLLQDPDIRYVLASTGFTGLITNGEKSTIFMG 117
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
D + + ++ G++ I + ++
Sbjct: 118 EGVDPDLPKVMGPALSITDGRMLSQQPDAQRDYEVLLGKGLADSLNATIGTGLTLLSSTY 177
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
G + + + + + + VS + V+++D A
Sbjct: 178 DGALNAIDVEVQGILSTGVPELDARLLRVHNATAQFLVDADRVSQLSVYLRDTSAQADYE 237
Query: 242 ENIVRILGNGVVVIDWQQRYQIFFSCYES 270
+ + + + V WQ R F+ ++
Sbjct: 238 QQLSALFPE-LKVTPWQDR-AFFYRSVKN 264
>gi|253581126|ref|ZP_04858385.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251847563|gb|EES75534.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 410
Score = 45.1 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 28/276 (10%), Positives = 82/276 (29%), Gaps = 21/276 (7%)
Query: 3 IFSRFE-VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+ + +E + +A + +N+ +F ++ +G++IG+ ++I ++SV G + M +
Sbjct: 1 MSNLYEYIKMAVHNIMANKGRSF------LTMLGIIIGIASVIAIVSVGEGTKNQMNSEI 54
Query: 62 LGINGHVVIQQKYYPLVDYQFIAN-----RLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
I G + + + + + V S + S +
Sbjct: 55 DDIGGGQIAISVSDEAQTDEEWITADDVEAIRAVDGIEGVNVSDSFSGETTTGKGNFSLM 114
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGK-DLARNLGISIGDKINILSPYG 175
L ++ Y + + ++ D R G + +
Sbjct: 115 LTGEGPDAKLLNNATMKHGVYFGENEVQEAKNVCVLSDADAKRLFGTDDVVGMTVDVNCY 174
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD 235
+T + G F + + + + + + + +
Sbjct: 175 GLTKSLRICGVTTQKENGTFVSYTYEGMPVTINVPYTTMNEFTGVSDYFFSVTMQADKSL 234
Query: 236 AIEKTHENIVRIL--------GNGVVVIDWQQRYQI 263
+ + +V+++ + V +Q
Sbjct: 235 NSQDVADKVVKLMEKRHQCAGKDYFQVQSFQDIMSS 270
>gi|260777161|ref|ZP_05886055.1| ABC-type transport system involved in lipoprotein release permease
component [Vibrio coralliilyticus ATCC BAA-450]
gi|260606827|gb|EEX33101.1| ABC-type transport system involved in lipoprotein release permease
component [Vibrio coralliilyticus ATCC BAA-450]
Length = 419
Score = 45.1 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 47/281 (16%), Positives = 83/281 (29%), Gaps = 25/281 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M V +A+ L NR+ S +S + + I V AL E + +
Sbjct: 1 MGQLVPQSVRIAYLNLLRNRRR------SVLSALIITIAVFALTSAGGFGLYTYESLQES 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFI-----------ANRLDFIPDVIKVLPFVSGQAFVSGL 109
GH+ I + D +L PD+ + P + VS
Sbjct: 55 TARDTGHLTISIPGFFEKDEDMPLTNGLEDSAAIYKQLISNPDIRGIQPRIEFTGLVSNG 114
Query: 110 SSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN 169
+ V R +S+ + + +
Sbjct: 115 NKSTIFVGTGVNEREFDMKGPFLDVRQGKTLSDIRSSRYQPSEPEVMLGVDLARNLNVSI 174
Query: 170 ILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV 229
T + + + V G++ PD D +Y+ ++ Q + + VS + V
Sbjct: 175 GDWITVLATTSDGALNALDFKVHGIYSTGVPDLDKRQLYLHIESVQELL-VSDKVSTLSV 233
Query: 230 FVKDPDAIEKTHENIVRIL-----GNGVVVIDWQQRYQIFF 265
F+ + K + L + V WQQR FF
Sbjct: 234 FLYETQNTLKLQSWVEEQLASLLHSQALEVTPWQQR--AFF 272
>gi|256423920|ref|YP_003124573.1| hypothetical protein Cpin_4939 [Chitinophaga pinensis DSM 2588]
gi|256038828|gb|ACU62372.1| protein of unknown function DUF214 [Chitinophaga pinensis DSM
2588]
Length = 406
Score = 45.1 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A + L N+ AF ++ +G++IGV A+I ++++ G +E + ++ + ++
Sbjct: 7 IRIALKALQRNKLRAF------LTMLGIIIGVAAVIAMVAIGQGSKESIQSQLSSMGSNM 60
Query: 69 V 69
+
Sbjct: 61 I 61
>gi|226226249|ref|YP_002760355.1| putative macrolide ABC transporter permease protein [Gemmatimonas
aurantiaca T-27]
gi|226089440|dbj|BAH37885.1| putative macrolide ABC transporter permease protein [Gemmatimonas
aurantiaca T-27]
Length = 404
Score = 45.1 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 36/260 (13%), Positives = 82/260 (31%), Gaps = 14/260 (5%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + + +A + + N+ F ++ +G++IGV A+IV++++ G R + +
Sbjct: 1 MKLM--VLLRMAMQSIVKNKMRTF------LTMLGIVIGVAAVIVMVAIGAGARGQIESQ 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + ++++ + + V +S +S +
Sbjct: 53 IATLGTNLIVVTPGTTQAGGSNQGAQTFNRLTIEDVEKLQREGTLLSAVSPVINTRTQVI 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ ++ N S + + N +D+ + I K + D +
Sbjct: 113 ATTGNWRTEVNGVSTGFFRIRNWTVESGAEFTEEDVQGKRTVVILGKTVANGLFPDGNAV 172
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNG------MVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G +R + M +V + AQ + + I D
Sbjct: 173 GQRVRLGRTPFTVIGVMSAKGQAATGTDQDDIVVVPYSTAQTRISNFFFIGSILAMTDDT 232
Query: 235 DAIEKTHENIVRILGNGVVV 254
AI I I+ V
Sbjct: 233 KAIPAAMNEIRDIMRESHRV 252
>gi|225872550|ref|YP_002754005.1| ABC transporter, permease protein [Acidobacterium capsulatum ATCC
51196]
gi|225791758|gb|ACO31848.1| ABC transporter, permease protein [Acidobacterium capsulatum ATCC
51196]
Length = 850
Score = 45.1 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 34/259 (13%), Positives = 75/259 (28%), Gaps = 14/259 (5%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
+ R L ++R + V IGV AL V F+ ++ + G+
Sbjct: 8 STAFRIGMRELRASRAKF------LFVLLSVAIGVAALTGVRGFSQSFQRALLGQARGLM 61
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+ Y+ Q A V + + V ++ +
Sbjct: 62 AADLSASLYHTASPAQVSAMNALAQHGVEMTQTMGTVSMAQAVGHPVPILVSLKAVDPGK 121
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ + N + G + + V++ +L L +GD++ I + + +
Sbjct: 122 YPFYGNLVLKPAGPLPQLLNDHT-VLVDDNLLVRLHAQVGDQLKIGGKLFRIAAVIVSEP 180
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ +G M + + +V + V I +
Sbjct: 181 DRLSAGVGFGPRVMMTRH-----MLDETGLVQMGSRASVRYL-FKVPKGTNIAALKAKLQ 234
Query: 246 RILGNGVVVIDWQQRYQIF 264
+IL V D+++
Sbjct: 235 QILPQA-QVEDYRETNPSL 252
>gi|312887063|ref|ZP_07746667.1| protein of unknown function DUF214 [Mucilaginibacter paludis DSM
18603]
gi|311300375|gb|EFQ77440.1| protein of unknown function DUF214 [Mucilaginibacter paludis DSM
18603]
Length = 406
Score = 45.1 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 41/69 (59%), Gaps = 8/69 (11%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M+IF+ + +A+ L N+ AF ++ +G++IGV ++I ++++ G ++ + +
Sbjct: 1 MNIFNL--LRIAYLALLRNKLRAF------LTMLGIVIGVASVIAMVAIGEGSKQSIHDQ 52
Query: 61 VLGINGHVV 69
+ G+ +++
Sbjct: 53 LSGMGSNMI 61
>gi|302671576|ref|YP_003831536.1| ABC transporter permease [Butyrivibrio proteoclasticus B316]
gi|302396049|gb|ADL34954.1| ABC transporter permease protein [Butyrivibrio proteoclasticus
B316]
Length = 401
Score = 45.1 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 31/234 (13%), Positives = 80/234 (34%), Gaps = 12/234 (5%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
+ SN+ +F ++ +G++IG+ A++ V+ + +G +E + + I +
Sbjct: 13 IRSNKGRSF------LTMLGIIIGISAVLTVLIIGDGMKETVNSEMDSIGATSITISLDN 66
Query: 76 PLVDYQFIANRLDFIPDVIKVLPFVSGQAF-----VSGLSSGGSGVLVRGISNSDFSYLQ 130
D +F +L I + I + +S ++ + + + + + ++
Sbjct: 67 TKTDKKFSLEQLREIEENIDDIYGISPSINLGGSLINKQKTYDCMIQAGTEATVNSAGVK 126
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
R+Y D+ VI + G + + T
Sbjct: 127 IVHGRYYSRNDVLEDKNVIVISQTAANKLFGYEEVVGNTLQIDAYGNAGELTVVGVTEDT 186
Query: 191 VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHEN 243
+ + + D + M A + L + + G +++ + + E E
Sbjct: 187 SMDLALAMYADEPTLIASMPYTTAASLYGLSTDGIDGATIYLDNENRDEVLGEA 240
>gi|153837027|ref|ZP_01989694.1| macrolide-specific ABC-type efflux carrier [Vibrio parahaemolyticus
AQ3810]
gi|149749615|gb|EDM60360.1| macrolide-specific ABC-type efflux carrier [Vibrio parahaemolyticus
AQ3810]
Length = 654
Score = 45.1 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 24/242 (9%), Positives = 79/242 (32%), Gaps = 7/242 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A + S+R F ++ +G++IG+ +++ V+++ NG ++ ++ + + +
Sbjct: 264 ALKMALLAMSSHRMRTF------LTMLGIIIGIASVVSVVALGNGSQQQILSNISSMGTN 317
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + D + + D + + LS+ + + +
Sbjct: 318 TIDVRPGKGFGDRRSGRVKTLTADDAKSLESLPFVDSVTPSLSNSLTVRYANQDATASVE 377
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLAR-NLGISIGDKINILSPYGDVTPMGMGIRS 186
+ + R G + + + ++ +
Sbjct: 378 GVGEDYFRVRGYEIAKGQFWDEESVNSLAQEAVIDDNTRKEMFADRNPIGEVIFLGSLPV 437
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ V F + D +++ + ++GI V + + ++I+
Sbjct: 438 RIVGVTQKKEDAFGNSDALKIWVPYTTMSGRMMGQRYLNGITVRIDEHAPSAAVEQSIIN 497
Query: 247 IL 248
+L
Sbjct: 498 LL 499
>gi|261341418|ref|ZP_05969276.1| macrolide efflux ABC transporter, permease/ATP-binding protein
[Enterobacter cancerogenus ATCC 35316]
gi|288316735|gb|EFC55673.1| macrolide efflux ABC transporter, permease/ATP-binding protein
[Enterobacter cancerogenus ATCC 35316]
Length = 646
Score = 44.8 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 30/251 (11%), Positives = 79/251 (31%), Gaps = 6/251 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A + + ++R + ++ G++ G+ A++ V+++ G ++ + + + +
Sbjct: 256 SLHMALKAMNAHRLR------TTLTMTGIIFGIAAVVTVVALGEGAKQRTLDNIKELGTN 309
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
VV D A R D + + +++ + + + + +
Sbjct: 310 VVSIYPGRDFFDDSTEAIRTLVPADAEALAKQGFVDSVSPEVNASDNIRFLGKSATATIN 369
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ R G + + + + +G
Sbjct: 370 GVGRDHFRVNGIELLQGSTFQDDRNASQEVIIDENARKALFDDAGLKALGQIVFLGSVPA 429
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ R + V+M + ++ I V +KD A E I ++
Sbjct: 430 RVVGIAKGNSRSYAPNRINVWMPYSTVMYRMTGKPVLTSISVRLKDDVANEAAVSAISQL 489
Query: 248 LGNGVVVIDWQ 258
L V D+Q
Sbjct: 490 LTQRHGVKDFQ 500
>gi|224367698|ref|YP_002601861.1| putative macrolipide-specific ABC-type efflux carrier (MacA
conjunction protein) [Desulfobacterium autotrophicum
HRM2]
gi|223690414|gb|ACN13697.1| putative macrolipide-specific ABC-type efflux carrier (MacA
conjunction protein) [Desulfobacterium autotrophicum
HRM2]
Length = 405
Score = 44.8 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 27/252 (10%), Positives = 87/252 (34%), Gaps = 12/252 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
++VA + + N+ S ++ +G++IGV ++I ++++ G + D+ V + ++
Sbjct: 7 ILVALKSIARNKMR------SLLTMLGIIIGVASVITMVALGEGSQADIEGEVASLGTNL 60
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
++ + + V+ + +S+ ++++S
Sbjct: 61 LMVRPGSVDSGGVSGGAGSRPSLTMDDVVRLEKYATRLRWVSAEVRATGQVIAGSNNWST 120
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ Y ++ N +D +++ K + D P+G +R ++
Sbjct: 121 TITGVAPNYLSIRNYEMENGSFFTVRDSKTRAKVAVLGKTVADELFPDQNPVGARLRIRN 180
Query: 189 YTVL------GMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + + +++ + + I +A++ E
Sbjct: 181 VPFKVIGVMAEKGQSSMGNDQDDIIFAPDNTVLYRLSNGKTIHDISASAISSEAMDAAKE 240
Query: 243 NIVRILGNGVVV 254
+ +L + +
Sbjct: 241 ELTTLLRSEHRL 252
>gi|145629728|ref|ZP_01785524.1| lipoprotein releasing system transmembrane protein [Haemophilus
influenzae 22.1-21]
gi|144978065|gb|EDJ87844.1| lipoprotein releasing system transmembrane protein [Haemophilus
influenzae 22.1-21]
Length = 240
Score = 44.8 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 13/108 (12%), Positives = 35/108 (32%), Gaps = 6/108 (5%)
Query: 162 ISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL- 220
+++GDKI ++ + + + + + + ++ + +
Sbjct: 1 MNVGDKIRLMITENSQYTPFGRVPMQRLFTVSDIYYDYGEASGYEAFANITDIGRLMRIQ 60
Query: 221 ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
G +F+ DP I + + + DW+ + FF
Sbjct: 61 PQQAQGYRLFLNDPFQI----TELPQHFPTQ-KITDWRVQKGEFFQAV 103
>gi|119897123|ref|YP_932336.1| ABC transporter permease [Azoarcus sp. BH72]
gi|119669536|emb|CAL93449.1| ABC transporter permease protein [Azoarcus sp. BH72]
Length = 399
Score = 44.8 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ R + +A R L ++R +F+++ +G+ +G+ A+I++ S+ G +++
Sbjct: 1 MLWRDFLQLALRSLTAHRLRSFLTL------LGIGVGIAAVILLTSIGEGLHRFVLQEFT 54
Query: 63 GINGHVV 69
+++
Sbjct: 55 QFGTNII 61
>gi|226313507|ref|YP_002773401.1| hypothetical protein BBR47_39200 [Brevibacillus brevis NBRC
100599]
gi|226096455|dbj|BAH44897.1| hypothetical membrane protein [Brevibacillus brevis NBRC 100599]
Length = 486
Score = 44.8 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 33/91 (36%), Gaps = 8/91 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + + WR L+ + + ++ +GVMIG A++ +M++ G +E +K
Sbjct: 1 MKVMD--SFRIVWRNLWRMKLR------TALTSVGVMIGTAAIVAMMALSLGLKESAVKS 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIP 91
+ + + +
Sbjct: 53 LENFGNLTEMDVDALRWYEENGEWIDVPEDK 83
>gi|149278097|ref|ZP_01884236.1| putative FtsX-related transmembrane transport protein [Pedobacter
sp. BAL39]
gi|149231295|gb|EDM36675.1| putative FtsX-related transmembrane transport protein [Pedobacter
sp. BAL39]
Length = 814
Score = 44.8 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 29/251 (11%), Positives = 66/251 (26%), Gaps = 21/251 (8%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMN---GFRED--M 57
+F + + +A R ++ N+ AFI+ G+ +G+ I ++ +N GF +
Sbjct: 1 MF-KLNLKIALRNIWKNKSAAFIN------MFGLSLGLAGFITILLYLNHETGFDKWDPK 53
Query: 58 IKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVL 117
+K V + H + L +S +
Sbjct: 54 LKNVYKVGVHFKVNASDEWWESLPSNLVTLMRKNCPEVKSASMSNWGEEVIVHGQDYFYD 113
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
+ + F+ G+ + +I + +A + + + D
Sbjct: 114 LNARVVDSTFFSTFPFTFLQGDARTALHQPNSAVINRKMAMKIFGTEDVIGKRIEMGFDK 173
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
+ + F + N I + +
Sbjct: 174 KLHTITGVWDNERNPTHFWADVITNIPDPA----DD-----GWGNFSYNIYFQLHEGADA 224
Query: 238 EKTHENIVRIL 248
E I R+
Sbjct: 225 ETALAKISRLF 235
>gi|299143239|ref|ZP_07036319.1| putative lipoprotein [Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298517724|gb|EFI41463.1| putative lipoprotein [Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 451
Score = 44.8 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 34/289 (11%), Positives = 80/289 (27%), Gaps = 56/289 (19%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+++A + L S + + ++ +GV+IG ++IV++S+ GF++ +
Sbjct: 7 IMMALKNLNSRKLR------TALTVLGVVIGATSIIVMLSIGFGFQKINTDMYKSMGDLT 60
Query: 69 VIQQKYYPLVDYQFIA-----------NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVL 117
+ + ++ I + V+ + + +SG
Sbjct: 61 TLDLHTDMFWSDEQEKEASKKKKTLNDQAINEIKRIPHVIAIMPMYKASAVFTSGRFSNN 120
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGD----------- 166
I ++ + + G ++ N
Sbjct: 121 GVDIVAIPADAMEKFGFKIGEGRLLNSQDNSGGVVMSFGCANENFRDDKRPYINSTGKIQ 180
Query: 167 --KINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDY----------------DNGMVY 208
K I V SY F + + Y
Sbjct: 181 ALKSRIEIKQFQVQNSNNEYSGGSYFDEDGFERKSYVEKLKVVGVLEENPNDWSNYNTTY 240
Query: 209 MSLQEAQLYFNLENAVSG----------IEVFVKDPDAIEKTHENIVRI 247
M+++ + V+G I+V V D + ++ + I +
Sbjct: 241 MTIEYFKKLKKASETVNGKTSALKAYSNIKVKVDDMENVDAVQKQIKDL 289
>gi|197334431|ref|YP_002155904.1| transporter [Vibrio fischeri MJ11]
gi|197315921|gb|ACH65368.1| transporter [Vibrio fischeri MJ11]
Length = 409
Score = 44.8 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 32/258 (12%), Positives = 74/258 (28%), Gaps = 16/258 (6%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +AWR L+ ++ ++ ++ + ++ +M +E + +
Sbjct: 3 IKLAWRNLWRQKRRTILTASALALAL----------LLSLLMRSIQEGSYTANIENAARL 52
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+++ + D +P + Q + + +
Sbjct: 53 STGLIQLQNPEFKETQSIDDLLPMSDDFIAPTKQQPNIQFTLPRIETFSLAAAKDKSKGV 112
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKD------LARNLGISIGDKINILSPYGDVTPMGM 182
L N + L
Sbjct: 113 LVVGVDPQPENAYSSLADKVVQGAYFTATDKSVLLSEGLARYFQLNVGDEIVLYGQGYRG 172
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ Y + G+ PD +N ++Y+ +QEA F+ EN V+ + +D + +T E
Sbjct: 173 QTAAGLYVIKGIVHFPMPDLNNQLIYLPIQEAVQLFSTENQVTSWVLHTRDFSLLPQTVE 232
Query: 243 NIVRILGNGVVVIDWQQR 260
+ + G V V W
Sbjct: 233 QLQKGYGQAVSVRPWNDL 250
>gi|31792177|ref|NP_854670.1| adhesion component transport transmembrane protein ABC transporter
[Mycobacterium bovis AF2122/97]
gi|31617765|emb|CAD93874.1| PROBABLE ADHESION COMPONENT TRANSPORT TRANSMEMBRANE PROTEIN ABC
TRANSPORTER [Mycobacterium bovis AF2122/97]
Length = 423
Score = 44.8 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 75/248 (30%), Gaps = 18/248 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
AWR L + +G+ +GV +IV + V + +
Sbjct: 13 WRTAWRRLRQRP------FQYILLVLGIALGVA-MIVAIDVSSNSAQRAFDLSAAAITGK 65
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ P + G GL + +
Sbjct: 66 STHRLVSGPAGVDQQLYVDLRRHGYDFSAPVIEGYVLARGLGNRAMQFMGTDPFAESAFR 125
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
++ + R GV++ + +A+ G+++GD+I + G
Sbjct: 126 SPLWSNQNIAELGGFLTRPNGVVLSRQVAQKYGLAVGDRIALQ-------VKGAPTTVTL 178
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+L + ++ + AQ F++ +S I++ +KD E T I + L
Sbjct: 179 VGLLTPADEVSNQKLSDLIIADISTAQELFHMPGRLSHIDLIIKD----EATATRIQQRL 234
Query: 249 GNGVVVID 256
GV +
Sbjct: 235 PAGVRMET 242
>gi|283787102|ref|YP_003366967.1| ABC transporter ATP-binding/permease protein [Citrobacter rodentium
ICC168]
gi|282950556|emb|CBG90222.1| ABC transporter ATP-binding/permease protein [Citrobacter rodentium
ICC168]
Length = 643
Score = 44.8 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
V +AWR L +R AF +S +G++IG+ +++ M+V G R+ ++
Sbjct: 253 SVRMAWRSLLGHRMRAF------LSMLGIIIGIASVVSSMAVGEGARQAIMS 298
>gi|254363905|ref|ZP_04979951.1| hypothetical adhesion component transport transmembrane protein ABC
transporter [Mycobacterium tuberculosis str. Haarlem]
gi|134149419|gb|EBA41464.1| hypothetical adhesion component transport transmembrane protein ABC
transporter [Mycobacterium tuberculosis str. Haarlem]
Length = 855
Score = 44.8 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 75/248 (30%), Gaps = 18/248 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
AWR L + +G+ +GV +IV + V + +
Sbjct: 13 WRTAWRRLRQRP------FQYILLVLGIALGVA-MIVAIDVSSNSAQRAFDLSAAAITGK 65
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ P + G GL + +
Sbjct: 66 STHRWVSGPAGVDQQLYVDLRRHGYDFSAPVIEGYVLARGLGNRAMQFMGTDPFAESAFR 125
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
++ + R GV++ + +A+ G+++GD+I + G
Sbjct: 126 SPLWSNQNIAELGGFLTRPNGVVLSRQVAQKYGLAVGDRIALQ-------VKGAPTTVTL 178
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+L + ++ + AQ F++ +S I++ +KD E T I + L
Sbjct: 179 VGLLTPADEVSNQKLSDLIIADISTAQELFHMPGRLSHIDLIIKD----EATATRIQQRL 234
Query: 249 GNGVVVID 256
GV +
Sbjct: 235 PAGVRMET 242
>gi|238762118|ref|ZP_04623091.1| Macrolide export ATP-binding/permease protein macB 2 [Yersinia
kristensenii ATCC 33638]
gi|238699846|gb|EEP92590.1| Macrolide export ATP-binding/permease protein macB 2 [Yersinia
kristensenii ATCC 33638]
Length = 649
Score = 44.8 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 24/243 (9%), Positives = 79/243 (32%), Gaps = 8/243 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+++AWR + +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 258 ALLMAWRAMSANKMR------TALTMLGIIIGIASVVSILVVGDAAKQLVLADIRAIGTN 311
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+ + A ++ + S
Sbjct: 312 TIDIYPGKDFGDDDPSTRQALVYDDMTALKAQSYVSAVSPTIAGSMRLRYGNIDVAASVS 371
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + R YG + + + + + +
Sbjct: 372 GVSEQYFRVYGMKLEQGTAITREQVERQSQVVVIDRNTQRRLFPHLKEVVGQVILIGNMP 431
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ V+ + F V++ + I + +K+ + ++ + +V
Sbjct: 432 ATIVGVVEEKQSMFGSSKALRVWVPYSTMASRLMGRSYFDSITIRIKEGYSSKEAEQQLV 491
Query: 246 RIL 248
R+L
Sbjct: 492 RLL 494
>gi|320535425|ref|ZP_08035534.1| efflux ABC transporter, permease protein [Treponema phagedenis
F0421]
gi|320147712|gb|EFW39219.1| efflux ABC transporter, permease protein [Treponema phagedenis
F0421]
Length = 405
Score = 44.8 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 38/266 (14%), Positives = 82/266 (30%), Gaps = 24/266 (9%)
Query: 7 FEVIV-AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
FE + A + N+ F +S +G++IGV ++I+ S+ + + M K N
Sbjct: 2 FEDFITALQNFKLNKGRTF------LSLLGIIIGVASVIITTSLGSSLQGSMEKFFSAFN 55
Query: 66 GHVVIQ-------QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
+V+ +++ F A+ IP+V +V + + V+ + +
Sbjct: 56 PNVINVIAGRGGGRQHLIEFTESFRADVKRQIPNVKRVFYTNTFNSEVTRKNLTAGNKEI 115
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKI-NILSPYGDV 177
I + D+ G I + G + I++ Y
Sbjct: 116 YSIEYGWLDAQKMELVYGSDFSIGDYAEGTRKAIIGETIAKGLFPEGHVVGKIITLYASN 175
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFN-LENAVSGIEVFVKDPDA 236
S T + + V + A F + IE + D
Sbjct: 176 DKNKKIPISFEVTGVLKDKATVFGRAKNYVLIPRAVAIWEFGVRNGGIMEIEAYFAD--T 233
Query: 237 IEKTHENIVRIL------GNGVVVID 256
+ +++ + + +
Sbjct: 234 VPDIEKDLEAFARERGGTPDSLYIFS 259
>gi|306827562|ref|ZP_07460844.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Streptococcus pyogenes ATCC 10782]
gi|304430269|gb|EFM33296.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Streptococcus pyogenes ATCC 10782]
Length = 405
Score = 44.8 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 30/260 (11%), Positives = 68/260 (26%), Gaps = 19/260 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A ++ ++ S ++ +G++IGV A++++M + N + + +
Sbjct: 4 WKFALSSIWGHKMR------SILTMLGIIIGVAAVVIIMGLGNAMKNSVTSTFSSKQKDI 57
Query: 69 VIQQ------------KYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
+ + + D+ + + + S +S V
Sbjct: 58 QLYFQEKGEEDLYAGLHTHENNHEVKPEWLEQIVKDIDGIDSYYFTNSATSTISYEKKKV 117
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
I Y + + L L + + N S
Sbjct: 118 DNASIIGVSKDYFNIKNYDIVAGRTLTDNDYSNFSRIILLDTVLADDLFGEGNYKSALNK 177
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
V + D +G M+ + F + + I + V D
Sbjct: 178 VVSLSDKDYLVIGVYKTDQTPVSFDGLSGGAVMANTQVASEFGTK-EIGSIYIHVNDIQN 236
Query: 237 IEKTHENIVRILGNGVVVID 256
+L N + D
Sbjct: 237 SMNLGNQAADMLTNISHIKD 256
>gi|30248829|ref|NP_840899.1| hypothetical protein NE0825 [Nitrosomonas europaea ATCC 19718]
gi|30180424|emb|CAD84736.1| DUF214 [Nitrosomonas europaea ATCC 19718]
Length = 399
Score = 44.8 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ A R L ++R F +S G+ IG+ A+I++ S+ +G + ++ +
Sbjct: 6 ALRFALRALTAHRMRTF------LSASGIAIGIAAVILLTSIGSGIQHFVLSEFTQFGTN 59
Query: 68 VVI 70
++
Sbjct: 60 ILN 62
>gi|114331337|ref|YP_747559.1| hypothetical protein Neut_1344 [Nitrosomonas eutropha C91]
gi|114308351|gb|ABI59594.1| protein of unknown function DUF214 [Nitrosomonas eutropha C91]
Length = 399
Score = 44.8 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ A R L ++R F +S G+ IG+ A+I++ S+ G + ++
Sbjct: 1 MNLVESLRF--ALRALTAHRTRTF------LSASGIAIGIAAVILLTSIGAGIQRFVLSE 52
Query: 61 VLGINGHVVI 70
++V
Sbjct: 53 FTQFGTNIVN 62
>gi|284039489|ref|YP_003389419.1| hypothetical protein Slin_4642 [Spirosoma linguale DSM 74]
gi|283818782|gb|ADB40620.1| protein of unknown function DUF214 [Spirosoma linguale DSM 74]
Length = 801
Score = 44.8 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 23/226 (10%), Positives = 56/226 (24%), Gaps = 14/226 (6%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVM---ALIVVMSVMNGFRED--M 57
+F + + ++ R L+ NRK + IS +G+ IG+ + +++S M F
Sbjct: 1 MFRNY-LTISLRNLWRNRK------VTLISTVGLSIGLACGLVIFLLVSYMFSFDRYHTK 53
Query: 58 IKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVL 117
R + + + + + + L ++ + G G
Sbjct: 54 ADRTYWVVTDIRQENVVPTDATPRPMGDVLREELPFVETAARLENSPSRVMAVPDGKGGF 113
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
+ S + + + + +P G V
Sbjct: 114 SKKFDESRSLCFTEPQFFSVFDSDWLSGNPETALAAPNTVVLTERYAQKYFGSANPMGKV 173
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA 223
++ ++S
Sbjct: 174 LRFDNQTDLTVTGLIKNLPSN--TKLRYDAFISYATVPTLSGGGGQ 217
>gi|148975346|ref|ZP_01812270.1| hypothetical protein VSWAT3_18173 [Vibrionales bacterium SWAT-3]
gi|145965270|gb|EDK30520.1| hypothetical protein VSWAT3_18173 [Vibrionales bacterium SWAT-3]
Length = 429
Score = 44.8 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 47/278 (16%), Positives = 80/278 (28%), Gaps = 27/278 (9%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
V +AW L N + S +S + + I V AL E + +
Sbjct: 14 PTSVRLAWLNLLRNGRR------SLLSVLIIAIAVFALTSAGGYGLYTYESLKESTARDT 67
Query: 66 GHVVIQQKYYPLVDYQFIANR-----------LDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
GH+ + Y D + + DV V P V VS S
Sbjct: 68 GHLTLSTPGYFEQDEDMPLSNGLDNVQAFTKSIIGDSDVRGVQPRVYFSGLVSNGSKSTI 127
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ R +S+ + +
Sbjct: 128 FMGTGVNEREFDMKGPFLDVRSGQTLSDVKSPRYDSQEPQVMLGTDLARNLKVAVGDWVT 187
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
T + + + V G++ P+ D +Y+ + AQ E VS + VF+ +
Sbjct: 188 LLATTSDGALNAFDFKVQGIYSTGVPELDKRQLYVHITTAQELLASE-KVSTLSVFLFET 246
Query: 235 DAIEKTHENIVRIL-------GNGVVVIDWQQRYQIFF 265
+ + I L G+ + + WQ R FF
Sbjct: 247 NKTSTVQQRIQLALDKQVGQQGSYIELTPWQDR--AFF 282
>gi|291165774|gb|EFE27822.1| lipoprotein [Filifactor alocis ATCC 35896]
Length = 454
Score = 44.8 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A+R L + S +S +GV+IG +++V++S+ G E K+V
Sbjct: 7 LSMAFRNLKRRKVR------SLLSIVGVVIGTTSIVVMLSLGIGLNEGNKKQVEKYENLH 60
Query: 69 VIQQKYYPLVDYQ 81
+IQ V+ Q
Sbjct: 61 IIQVMNPGGVNRQ 73
>gi|114331978|ref|YP_748200.1| hypothetical protein Neut_2012 [Nitrosomonas eutropha C91]
gi|114308992|gb|ABI60235.1| protein of unknown function DUF214 [Nitrosomonas eutropha C91]
Length = 407
Score = 44.8 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 36/257 (14%), Positives = 86/257 (33%), Gaps = 16/257 (6%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A R L +NR + ++ +G++IGV A++++++V G + + + + H++I
Sbjct: 10 AMRALQTNRLR------TALTMLGMIIGVAAVVLMLAVGQGAQTSINSAIASMGSHLLII 63
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
V + + +N+ + L
Sbjct: 64 MPGATSSGGVRWGIGSVKTLTVQDAQAIAELPMIDATAPIISGAAQLNYNANNWSTILTG 123
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTV 191
++ + + + DL +++ +I S +GD P+G IR +
Sbjct: 124 VTPDYFSINNWE-IASGTIFSEGDLRSGTRMAVLGQITATSLFGDEDPVGKVIRITNRPF 182
Query: 192 LG------MFRMRFPDYDNGMVYMSLQEAQLYF---NLENAVSGIEVFVKDPDAIEKTHE 242
+ + V++ L AQ +++ + V K + +E
Sbjct: 183 TVVGVLAAKGQSLSGRDQDDNVFIPLTTAQRQIIGNQFPGSINFMMVRAKSENDMEAAEA 242
Query: 243 NIVRILGNGVVVIDWQQ 259
I +L + + +
Sbjct: 243 EITHLLRQRHRISNHME 259
>gi|116620844|ref|YP_823000.1| hypothetical protein Acid_1725 [Candidatus Solibacter usitatus
Ellin6076]
gi|116224006|gb|ABJ82715.1| protein of unknown function DUF214 [Candidatus Solibacter usitatus
Ellin6076]
Length = 424
Score = 44.8 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 36/85 (42%), Gaps = 6/85 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A L S++ +F+++ +GV+I LIVVMS++NG + + + + +
Sbjct: 23 AFWIAVEALRSHKLRSFLTL------LGVVIATTTLIVVMSIVNGMNLYIAEHIANLGTN 76
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPD 92
+ ++ + N
Sbjct: 77 TFVLHQFQWAQGFDSFLNARRRNKP 101
>gi|121609486|ref|YP_997293.1| hypothetical protein Veis_2530 [Verminephrobacter eiseniae EF01-2]
gi|121554126|gb|ABM58275.1| protein of unknown function DUF214 [Verminephrobacter eiseniae
EF01-2]
Length = 407
Score = 44.8 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 54/274 (19%), Positives = 96/274 (35%), Gaps = 30/274 (10%)
Query: 9 VIV-AWRYLFSNRKNAFISIASFISFIGVMIGVMALI----VVMSVMNGFREDMIKRVLG 63
V AWR + NR+ + +S V G MAL+ V++ +G RE +I LG
Sbjct: 3 WFVYAWRNVARNRRR------TVLSAAIVACGSMALLLSIGFVLASFHGLRESIISSELG 56
Query: 64 I----------NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGG 113
Q + + + L + + + +S
Sbjct: 57 HIQIGARGQFEGNEEKPLQYGLSPQQVKAVESNLQQESGLRFSTRRILFEGLLSTGRRSV 116
Query: 114 SGVLVRGISNSDFSYLQNSFSRFYG-NVSNDFDRGKGVIIGKDLARNLGISIGDKINILS 172
+ V S + G +S+D R + ++I DLA +L + GD I ++
Sbjct: 117 AFVGQGVESEKESRLSTMFAPIISGNGLSDDPSRPEQILIAVDLAHSLQVKPGDTITVMV 176
Query: 173 PYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK 232
D V G +R PD D + M LQ Q + +S + + ++
Sbjct: 177 TTEDGVLNAA-----DAVVAGTYRTGVPDLDRRAIMMPLQNVQSLL-VTQKISRLVLALR 230
Query: 233 DPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFS 266
D DA + + L + + W + F++
Sbjct: 231 DTDATDALASRLRAQLP-ALDIKRWIEL-APFYN 262
>gi|15674873|ref|NP_269047.1| ABC transporter permease [Streptococcus pyogenes M1 GAS]
gi|71910459|ref|YP_282009.1| ABC transporter permease [Streptococcus pyogenes MGAS5005]
gi|13622010|gb|AAK33768.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
gi|71853241|gb|AAZ51264.1| ABC transporter permease protein [Streptococcus pyogenes MGAS5005]
Length = 406
Score = 44.8 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 31/261 (11%), Positives = 68/261 (26%), Gaps = 20/261 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A ++ ++ S ++ +G++IGV A++++M + N + + +
Sbjct: 4 WKFALSSIWGHKMR------SILTMLGIIIGVAAVVIIMGLGNAMKNSVTSTFSSKQKDI 57
Query: 69 VIQQ-------------KYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSG 115
+ + + D+ + + + S +S
Sbjct: 58 QLYFQEKGEEEDLYAGLHTHENNHEVKPEWLEQIVKDIDGIDSYYFTNSATSTISYEKKK 117
Query: 116 VLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYG 175
V I Y + + L L + K N S
Sbjct: 118 VDNASIIGVSKDYFNIKNYDIVAGRTLTDNDYSNFSRIILLDTVLADDLFGKGNYKSALN 177
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD 235
V + D +G M+ + F + + I + V D
Sbjct: 178 KVVSLSDKDYLVIGVYKTDQTPVSFDGLSGGAVMANTQVASEFGTK-EIGSIYIHVNDIQ 236
Query: 236 AIEKTHENIVRILGNGVVVID 256
+L N + D
Sbjct: 237 NSMNLGNQAADMLTNISHIKD 257
>gi|310821874|ref|YP_003954232.1| ABC transporter permease [Stigmatella aurantiaca DW4/3-1]
gi|309394946|gb|ADO72405.1| ABC transporter, permease protein [Stigmatella aurantiaca DW4/3-1]
Length = 409
Score = 44.8 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 25/230 (10%), Positives = 69/230 (30%), Gaps = 11/230 (4%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IGV +I +M+++ G R + K + + + + K+
Sbjct: 22 SLLTLLGIVIGVTTVITMMALIEGLRIKVNKDLSQLGANTFMATKWPMGFGRFNWQMYAK 81
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSND----- 143
++ + + + I + + +
Sbjct: 82 RPSFTLEDARAIEQSCPSVKSVAASDDEGGQKIVTATQETRPSVRVFGATPEYLETSGIT 141
Query: 144 -----FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMR 198
F + G+ +A + +P G + + +
Sbjct: 142 VASGRFFGESEAVDGRHVAVVGLDVADALLPGQNPIGHEIRVKGRPFTIIGVLQRRGSFL 201
Query: 199 FPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ +V M L+ Q + ++ + + D D + K + + +L
Sbjct: 202 GMMSMDNLVIMPLRSFQQLYGKARSLD-LNIQAHDADLVNKAKDEVETLL 250
>gi|89901956|ref|YP_524427.1| hypothetical protein Rfer_3187 [Rhodoferax ferrireducens T118]
gi|89346693|gb|ABD70896.1| protein of unknown function DUF214 [Rhodoferax ferrireducens T118]
Length = 400
Score = 44.8 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 36/263 (13%), Positives = 87/263 (33%), Gaps = 18/263 (6%)
Query: 14 RYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQK 73
R + N +F ++ +G++IGV A+I ++++ NG + ++ G+ +++ +
Sbjct: 11 RSIRRNLLRSF------LTILGIVIGVSAVITMVTLGNGATLAIQNQISGLGTNLLQVRP 64
Query: 74 YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSF 133
++ A + A +GG+ V S F N++
Sbjct: 65 GQRMMGGAGGAPSFKEVDAEAIASQIGGIAAVAPEARAGGTLVANGRNWTSSFIGSSNNW 124
Query: 134 SRFYGNVSNDFDRGKG--VIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTV 191
D ++ G + + G+ + + +
Sbjct: 125 LITGNWKIADGREFSNDELMAGAAVCLIGETVRRELFGSRPVLGEQLRVKQVSCNIVGLL 184
Query: 192 LGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL--- 248
+ F + + +V + L+ Q V+ + V + D E+ +I ++L
Sbjct: 185 ASKGQGAFGNDQDDVVLLPLKTLQRRITGNTRVNTLLVSMMDGSDPERVKASITQLLRER 244
Query: 249 -------GNGVVVIDWQQRYQIF 264
+ V+D +Q
Sbjct: 245 RKLAQSDEDNFNVLDTKQLADTL 267
>gi|256829673|ref|YP_003158401.1| protein of unknown function DUF214 [Desulfomicrobium baculatum DSM
4028]
gi|256578849|gb|ACU89985.1| protein of unknown function DUF214 [Desulfomicrobium baculatum DSM
4028]
Length = 385
Score = 44.8 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 32/250 (12%), Positives = 75/250 (30%), Gaps = 27/250 (10%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+ ++ + R + +G++IG+ + + +++ + K + ++V
Sbjct: 5 KLVFKNIVRRRGRF------VFTLLGIVIGMASFVTFVALGGSLTAQIKKESAALGANLV 58
Query: 70 IQQKYYPLVDY------QFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ K + + + + S V +
Sbjct: 59 VTPKGSCAFEQVSILTGEQLPTTITAEEVAAIRAIPGMTAIPFLAERSAIQNRPVSVLGV 118
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
L R G ++G +A + G ++ I V +
Sbjct: 119 PTEESLPFKGWRVSAGRYFSAPDEHGALLGSVVAGQFALQPGGEVTIRGTRLPVLGVLEE 178
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
K V++SL AQ ++ ++ VS + V V D + ++
Sbjct: 179 TGGKDDLT---------------VFLSLPVAQRLYDQQDRVSYVAVRVDDLEEVDAYALK 223
Query: 244 IVRILGNGVV 253
I ++ GVV
Sbjct: 224 IKDVVSLGVV 233
>gi|330860564|emb|CBX70863.1| macrolide export ATP-binding/permease protein macB 2 [Yersinia
enterocolitica W22703]
Length = 496
Score = 44.8 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 24/243 (9%), Positives = 80/243 (32%), Gaps = 8/243 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+++AWR + +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 105 ALLMAWRAMSANKMR------TALTMLGIIIGIASVVSILVVGDAAKQLVLADIRAIGTN 158
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+ + A ++ + S
Sbjct: 159 TIDIYPGKDFGDDDPSTRQALVYDDMTALKAQSYVSAVSPTIAGSMRLRYGNIDVAASVS 218
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + + R YG + + + + + +
Sbjct: 219 GVSDQYFRVYGMKLEQGTAITREQVERQSQVVVIDRNTQRRLFPHIKDVVGQVILIGNMP 278
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ V+ + F V++ + I + +K+ + ++ + +V
Sbjct: 279 ATVVGVVEEKQSMFGSSKALRVWVPYSTMASRLMGRSYFDSITIRIKEGYSSKEAEQQLV 338
Query: 246 RIL 248
R+L
Sbjct: 339 RLL 341
>gi|330995833|ref|ZP_08319730.1| efflux ABC transporter, permease protein [Paraprevotella
xylaniphila YIT 11841]
gi|329574563|gb|EGG56128.1| efflux ABC transporter, permease protein [Paraprevotella
xylaniphila YIT 11841]
Length = 412
Score = 44.8 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 11/69 (15%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A + + SN+ +F ++ +G++IGV ++I ++++ G + + K++ + ++
Sbjct: 7 FKIALKAIASNKLRSF------LTALGIIIGVASVIAMLAIGQGSKRSIRKQISEMGSNM 60
Query: 69 VIQQKYYPL 77
++ +
Sbjct: 61 IMIHPGADM 69
>gi|269965603|ref|ZP_06179716.1| putative ABC transporter, ATP-binding protein [Vibrio alginolyticus
40B]
gi|269829671|gb|EEZ83907.1| putative ABC transporter, ATP-binding protein [Vibrio alginolyticus
40B]
Length = 654
Score = 44.8 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 24/242 (9%), Positives = 79/242 (32%), Gaps = 7/242 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A + S+R F ++ +G++IG+ +++ V+++ NG ++ ++ + + +
Sbjct: 264 ALKMALLAMSSHRMRTF------LTMLGIIIGIASVVSVVALGNGSQQQILSNISSMGTN 317
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + D + + D + + LS+ + + +
Sbjct: 318 TIDVRPGKGFGDRRSGRVKTLTADDAKSLESLPFVDSVTPSLSNSLTVRYANQDATASVE 377
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLAR-NLGISIGDKINILSPYGDVTPMGMGIRS 186
+ + R G + + + ++ +
Sbjct: 378 GVGEDYFRVRGYGIAKGQFWDEDSVNSLAQEAVIDDNTRKEMFAHRNPIGEVIFLGSLPV 437
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ V F + D +++ + ++GI V + + ++I+
Sbjct: 438 RIVGVTQKKEDAFGNSDALKIWVPYTTMSGRMMGQRYLNGITVRIDEHAPSAAVEQSIIN 497
Query: 247 IL 248
+L
Sbjct: 498 LL 499
>gi|167631106|ref|YP_001681605.1| hypothetical protein HM1_3093 [Heliobacterium modesticaldum Ice1]
gi|167593846|gb|ABZ85594.1| conserved hypothetical protein [Heliobacterium modesticaldum Ice1]
Length = 404
Score = 44.8 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 36/263 (13%), Positives = 85/263 (32%), Gaps = 25/263 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH- 67
+A+R + N+ +F ++ +G++IGV A+I ++++ G + ++ G+ +
Sbjct: 7 FRLAFRSVKVNKMRSF------LTALGIIIGVSAVITLVAIGQGASSSITDQIQGLGSNL 60
Query: 68 -----------VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
V AN + + V V P V+ QA + + +
Sbjct: 61 LIVTAGQASQGGVHMGAGTLNTLTLEDANAIAKLRTVFAVAPSVTRQAQLVYRNQNMAAT 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
+ ++ + + N + I+G ++ NL +
Sbjct: 121 VEGTSADYPRVRRTELKAGRFFNKYEVQGQANVAIVGVNVVENLFGDRDAGVIGQKIEIK 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
P + +S ++ V++ + A V+ I V D
Sbjct: 181 QIPFTIVGVLESQGGGM-------TNNDDRVFVPVTTAMNRLFGMTKVNTIYVSAHSTDV 233
Query: 237 IEKTHENIVRILGNGVVVIDWQQ 259
I++ + L + +
Sbjct: 234 IDQAQAEVASTLRIQHNLSTRED 256
>gi|75909071|ref|YP_323367.1| hypothetical protein Ava_2859 [Anabaena variabilis ATCC 29413]
gi|75702796|gb|ABA22472.1| Protein of unknown function DUF214 [Anabaena variabilis ATCC 29413]
Length = 423
Score = 44.8 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 39/265 (14%), Positives = 83/265 (31%), Gaps = 31/265 (11%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+++A L+SN+ + ++ +GV+IG+ ++I + SV G ++ + +++ + V
Sbjct: 20 LLMAAETLWSNKLR------TGLTMLGVIIGIASVIAITSVGQGVQKSVEQQIQALGTDV 73
Query: 69 VIQQKYYPLV-------------DYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSG 115
+ P ++ P V ++ A V S
Sbjct: 74 IQILAGAPRSGNVRQGLGSTSTLTWEDAKAIAQQAPSAEIVSAYLQRNAQVVYGGENTST 133
Query: 116 VLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYG 175
+ N + + Y + +IG + R L G I
Sbjct: 134 TIYGTDLNYPEARNTHPQEGRYFTQQELDSSAQVAVIGPTVQRTLFGQGGTPI------- 186
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN-----AVSGIEVF 230
G + + P + +++ L N +VSGI V
Sbjct: 187 GEKIRIQGEAYDVIGITEPKGSQGPMDRDDQIFIPLTSMSKRLVGNNALTGVSVSGILVK 246
Query: 231 VKDPDAIEKTHENIVRILGNGVVVI 255
+ + +E + IL +
Sbjct: 247 SSNQEQLEAAQFQVTNILRLRHNIY 271
>gi|17227942|ref|NP_484490.1| hypothetical protein alr0446 [Nostoc sp. PCC 7120]
gi|17129791|dbj|BAB72404.1| alr0446 [Nostoc sp. PCC 7120]
Length = 423
Score = 44.8 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 39/265 (14%), Positives = 83/265 (31%), Gaps = 31/265 (11%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+++A L+SN+ + ++ +GV+IG+ ++I + SV G ++ + +++ + V
Sbjct: 20 LLMAAETLWSNKLR------TGLTMLGVIIGIASVIAITSVGQGVQKSVEQQIQALGTDV 73
Query: 69 VIQQKYYPLV-------------DYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSG 115
+ P ++ P V ++ A V S
Sbjct: 74 IQILAGAPRSGNVRQGLGSTSTLTWEDAKAIAQQAPSAEIVSAYLQRNAQVVYGGENTST 133
Query: 116 VLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYG 175
+ N + + Y + +IG + R L G I
Sbjct: 134 TIYGTDLNYPEARNTHPQEGRYFTQQELDSSAQVAVIGPTVQRTLFGQGGTPI------- 186
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN-----AVSGIEVF 230
G + + P + +++ L N +VSGI V
Sbjct: 187 GEKIRIQGEAYDVIGITEPKGSQGPMDRDDQIFIPLTSMSKRLVGNNALTGVSVSGILVK 246
Query: 231 VKDPDAIEKTHENIVRILGNGVVVI 255
+ + +E + IL +
Sbjct: 247 SSNQEQLEAAQFQVTNILRLRHNIY 271
>gi|294508882|ref|YP_003572941.1| ABC transporter ATP-binding protein [Salinibacter ruber M8]
gi|294345211|emb|CBH25989.1| ABC transporter, ATP-binding protein [Salinibacter ruber M8]
Length = 441
Score = 44.8 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A + +++N+ S ++ +GV+IG+ A+ ++ +V+NG ++ K + + V+
Sbjct: 41 IAGQAIWANKMR------STLTTLGVIIGIAAVTLMATVINGLDQEFEKALSQLGTDVLY 94
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVS 107
++ + RL P + L +
Sbjct: 95 VDQFPWGQNADREWWRLRNRPAIQPALAETIQERSRF 131
>gi|94990214|ref|YP_598314.1| ABC transporter permease protein [Streptococcus pyogenes MGAS10270]
gi|94543722|gb|ABF33770.1| ABC transporter permease protein [Streptococcus pyogenes MGAS10270]
Length = 406
Score = 44.8 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 30/261 (11%), Positives = 68/261 (26%), Gaps = 20/261 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A ++ ++ S ++ +G++IGV A++++M + N + + +
Sbjct: 4 WKFALSSIWGHKMR------SILTMLGIIIGVAAVVIIMGLGNAMKNSVTSTFSSKQKDI 57
Query: 69 VIQQ-------------KYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSG 115
+ + + D+ + + + S +S
Sbjct: 58 QLYFQEKGEEEDLYAGLHTHENNHEVKPEWLEQIVKDIDGIDSYYFTNSATSTISYEKKK 117
Query: 116 VLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYG 175
V I Y + + L L + + N S
Sbjct: 118 VDNASIIGVSKDYFNIKNYDIVAGRTLTDNDYSNFSRIILLDTVLADDLFGEGNYKSALN 177
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD 235
V + D +G M+ + F + + I + V D
Sbjct: 178 KVVSLSDKDYLVVGVYKTDQTPVSFDGLSGGAVMANTQVASEFGTK-EIGSIYIHVNDIQ 236
Query: 236 AIEKTHENIVRILGNGVVVID 256
+L N + D
Sbjct: 237 NSMNLGNQAADMLTNISHIKD 257
>gi|83816734|ref|YP_446942.1| ABC transporter, ATP-binding protein [Salinibacter ruber DSM 13855]
gi|83758128|gb|ABC46241.1| ABC transporter, ATP-binding protein [Salinibacter ruber DSM 13855]
Length = 414
Score = 44.8 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A + +++N+ S ++ +GV+IG+ A+ ++ +V+NG ++ K + + V+
Sbjct: 14 IAGQAIWANKMR------STLTTLGVIIGIAAVTLMATVINGLDQEFEKALSQLGTDVLY 67
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVS 107
++ + RL P + L +
Sbjct: 68 VDQFPWGQNADREWWRLRNRPAIQPALAETIQERSRF 104
>gi|303247837|ref|ZP_07334105.1| protein of unknown function DUF214 [Desulfovibrio fructosovorans
JJ]
gi|302490738|gb|EFL50639.1| protein of unknown function DUF214 [Desulfovibrio fructosovorans
JJ]
Length = 407
Score = 44.8 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 25/261 (9%), Positives = 72/261 (27%), Gaps = 16/261 (6%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + +A + L +++ + ++ +GV +G +AL V+ + ++
Sbjct: 1 MF--LSLRIALKSLTTHKMR------TILAMLGVFLGALALTGVLHISLAMERKAVQETE 52
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDF----IPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
+ ++++ + +PD + +L + + S +
Sbjct: 53 KLGPNLLMAMSGNVRFRRGDVRADAGNTKLKLPDAMALLRGLPSVVGGVPYLAFTSPIRA 112
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
+ D A + +
Sbjct: 113 GDKKTMCQIVATWPAYPNIRGNHAQYGHFFDQQDEDDKAMVCALGQTIATRLFGSPEAAV 172
Query: 179 PMGMGIRSKSYTVLGMFRMR----FPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
+ I V+G+ + + +++ L + +N + G+ + + D
Sbjct: 173 GREVHIYRARVRVVGVMEEKGADVSGTNQDEQIFVPLSTYMRRMSNKNYIHGVYMQLADG 232
Query: 235 DAIEKTHENIVRILGNGVVVI 255
E IL +
Sbjct: 233 TDFEAAKATAQHILRRRHGIK 253
>gi|296134122|ref|YP_003641369.1| protein of unknown function DUF214 [Thermincola sp. JR]
gi|296032700|gb|ADG83468.1| protein of unknown function DUF214 [Thermincola potens JR]
Length = 389
Score = 44.8 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 36/269 (13%), Positives = 91/269 (33%), Gaps = 26/269 (9%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M+ ++ +A + +N+ +F ++ +GV+IGV A+I+++SV G + + +
Sbjct: 1 MNFSQAVKLAIAG--IRANKMRSF------LTMLGVIIGVSAVIILVSVGQGSAKQVTGQ 52
Query: 61 VLGINGHVVIQQKYYPLVD---YQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVL 117
+ + +++ A +L P V + P +S V + L
Sbjct: 53 IESLGSNLISVNIRGRGEVSGLSYQEALKLGDRPGVSGIAPTISSSVTVKYGTKKVDTSL 112
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
Q + + + + R K V++G ++ ++
Sbjct: 113 EGTNEQYATVRNQKTSAGRFLLPVDVEYRQKVVLLGSEV--------SRELFGFGNPIGQ 164
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
G++ K +L ++ V + + A +S + + K + +
Sbjct: 165 EVKINGVKFKVVGLLEEKGSSMGGSNDDKVIIPITTAMRLLANP-QISSVSLQAKSKEDV 223
Query: 238 EKTHENIVRIL------GNGVVVIDWQQR 260
+ + L + V + +
Sbjct: 224 DIVVRQVEAALLRKFKDEDNYRVFNQAEM 252
>gi|311746417|ref|ZP_07720202.1| putative ABC transporter, permease protein [Algoriphagus sp. PR1]
gi|126575305|gb|EAZ79637.1| putative ABC transporter, permease protein [Algoriphagus sp. PR1]
Length = 817
Score = 44.8 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 32/255 (12%), Positives = 75/255 (29%), Gaps = 16/255 (6%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMA-LIVVMSVMN--GFREDMIK 59
+ + +A R L ++ FI+ +G+ +GV +I+ + V+N + +
Sbjct: 1 MLKNY-FKIALRNLKKHKFYTFIN------VLGLSVGVAVCMIISIFVINELSYDKHFKD 53
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
H I Q A +D +P + + + ++
Sbjct: 54 ADRIYRIHSDIIFGGNHWNMVQAPAPMVDALPQEFPEVEYAVNFRQRGSYLVKKTDENIK 113
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ S GV+ + + S G
Sbjct: 114 EDNVIWASK----DFFNVFGTRLLEGSPDGVLAEPNTMAISKSAAEKYFPGESALGKSLI 169
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSL-QEAQLYFNLENAVSGIEVFVKDPDAIE 238
+ + + V + + ++ M +EAQ L N + + ++D E
Sbjct: 170 LDNDMDFRISGVYEDIPQNTHFHFDFLLSMEGLEEAQTTSWLSNNFATY-LKIRDDADPE 228
Query: 239 KTHENIVRILGNGVV 253
++ + ++ V
Sbjct: 229 NLNQKLKSLVKKNVE 243
>gi|323720553|gb|EGB29634.1| adhesion component ABC transporter permease [Mycobacterium
tuberculosis CDC1551A]
Length = 688
Score = 44.8 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 75/248 (30%), Gaps = 18/248 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
AWR L + +G+ +GV +IV + V + +
Sbjct: 13 WRTAWRRLRQRP------FQYILLVLGIALGVA-MIVAIDVSSNSAQRAFDLSAAAITGK 65
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ P + G GL + +
Sbjct: 66 STHRLVSGPAGVDQQLYFDLRRHGYDFSAPVIEGYVLARGLGNRAMQFMGTDPFAESAFR 125
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
++ + R GV++ + +A+ G+++GD+I + G
Sbjct: 126 SPLWSNQNIAELGGFLTRPNGVVLSRQVAQKYGLAVGDRIALQ-------VKGAPTTVTL 178
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+L + ++ + AQ F++ +S I++ +KD E T I + L
Sbjct: 179 VGLLTPADEVSNQKLSDLIIADISTAQELFHMPGRLSHIDLIIKD----EATATRIQQRL 234
Query: 249 GNGVVVID 256
GV +
Sbjct: 235 PAGVRMET 242
>gi|264679875|ref|YP_003279784.1| macrolide-specific ABC-type effluxcarrier [Comamonas testosteroni
CNB-2]
gi|262210390|gb|ACY34488.1| macrolide-specific ABC-type effluxcarrier [Comamonas testosteroni
CNB-2]
Length = 652
Score = 44.8 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 27/238 (11%), Positives = 77/238 (32%), Gaps = 7/238 (2%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AWR + NR + ++ +G++IGV ++IV++++ G R +++++ + ++
Sbjct: 267 AWRGMRMNRVR------TSLTLLGIVIGVASVIVMLAIGEGARRKVVEQMGTMGTAILYM 320
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
P D + + ++ + + G + + S
Sbjct: 321 GSKPPASGGPAGQITEDDLVAMRELPAIRRVMPVIGDPVTVRYGKADKQVYVFAASEEMP 380
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTV 191
+ F + + + + +P G +G +
Sbjct: 381 LVHHWRVAQGRYFTEVEDRDLAPLVVIGHKAHQHFFPEVANPLGLQLIIGNSAFEVIGVM 440
Query: 192 LGMFRMRFPDYDNGMVYMSLQEAQ-LYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ MV++ Q + + + + V + + + ++I +L
Sbjct: 441 SERGADSGAQDYDDMVFIPYQSGRARVYQAQTQPDYVVVEASSSEQVHEAEQSIRGLL 498
>gi|19745914|ref|NP_607050.1| ABC transporter permease [Streptococcus pyogenes MGAS8232]
gi|19748069|gb|AAL97549.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
Length = 406
Score = 44.8 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 31/261 (11%), Positives = 68/261 (26%), Gaps = 20/261 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A ++ ++ S ++ +G++IGV A++++M + N + + +
Sbjct: 4 WKFALSSIWGHKMR------SILTMLGIIIGVAAVVIIMGLGNAMKNSVTSTFSSKQKDI 57
Query: 69 VIQQ-------------KYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSG 115
+ + + D+ + + + S +S
Sbjct: 58 QLYFQEKGEEEDLYAGLHTHENNHEVKPEWLEQIVKDIDGIDSYYFTNSAASTISYEKKK 117
Query: 116 VLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYG 175
V I Y + + L L + K N S
Sbjct: 118 VDNASIIGVSKDYFNIKNYDIVAGRTLTDNDYSNFSRIILLDTVLADDLFGKGNYKSALN 177
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD 235
V + D +G M+ + F + + I + V D
Sbjct: 178 KVVSLSDKDYLVIGVYKTDQTPVSFDGLSGGAVMANTQVASEFGTK-EIGSIYIHVNDIQ 236
Query: 236 AIEKTHENIVRILGNGVVVID 256
+L N + D
Sbjct: 237 NSMNLGNQAADMLTNISHIKD 257
>gi|238761678|ref|ZP_04622653.1| Macrolide export ATP-binding/permease protein macB [Yersinia
kristensenii ATCC 33638]
gi|238700192|gb|EEP92934.1| Macrolide export ATP-binding/permease protein macB [Yersinia
kristensenii ATCC 33638]
Length = 643
Score = 44.8 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 29/242 (11%), Positives = 76/242 (31%), Gaps = 6/242 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +R AF +S +G++IG+ +++ M+V G R++++ + +
Sbjct: 254 AIKMAWRALLGHRIRAF------LSMLGIIIGISSVVSSMAVGEGARQEILSEISQLGIS 307
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + + R + DV + + +S + + S
Sbjct: 308 NMEIRPGLGWDKPRPDFERALSVADVELLSSQPYVENLSPVVSKMVTAIHGDKQVAIMLS 367
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ F + G D + + + + +
Sbjct: 368 GVGQGFFKASGLNIIAGDSLTQHHVNAREPVVILQPELRDTLFAAGQNPIGEIVQLDGIP 427
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ R +M + + + I V + + ++ + +I ++
Sbjct: 428 LRVIGVAKRAGSSYGGLLAAWMPYTSLTERISGDIPLESIAVQIGENYSLNEVQRDIEKV 487
Query: 248 LG 249
L
Sbjct: 488 LD 489
>gi|91217582|ref|ZP_01254540.1| ABC transporter, permease protein, putative [Psychroflexus torquis
ATCC 700755]
gi|91184262|gb|EAS70647.1| ABC transporter, permease protein, putative [Psychroflexus torquis
ATCC 700755]
Length = 419
Score = 44.8 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 33/242 (13%), Positives = 70/242 (28%), Gaps = 15/242 (6%)
Query: 27 IASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANR 86
+ ++ GV G+ L+++++ NG + GI+ + + Y +
Sbjct: 19 FRTVLTAFGVFWGIFILVLLLAAGNGLENGVKGIFSGISTNSMFMWTQTASRPYDGLPKG 78
Query: 87 LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDR 146
+ DV + + + S + + G SN+ L+N G+ ++
Sbjct: 79 RRYNFDVNDITA-IEQKVNGLKYVSPRNQLGGFGGSNNVVRGLKNGDFYVSGDYPEILNQ 137
Query: 147 GKGVIIGKDLARNLGISIGDKINI--------------LSPYGDVTPMGMGIRSKSYTVL 192
I+ I K+ + + +
Sbjct: 138 ESLKILRGRFINQNDIENKRKVAVIGEGVLNELYEIDEDPLGTYIKVNSVNFMVIGVYKK 197
Query: 193 GMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGV 252
F + + VY FN V I + +D +I E I I+
Sbjct: 198 RGFGGGDAEEEQKKVYTPFTAFSQAFNYGEVVGWIAITAEDDFSITSLKEQIFSIIKTNH 257
Query: 253 VV 254
+
Sbjct: 258 RI 259
>gi|312621390|ref|YP_004023003.1| hypothetical protein Calkro_0273 [Caldicellulosiruptor
kronotskyensis 2002]
gi|312201857|gb|ADQ45184.1| protein of unknown function DUF214 [Caldicellulosiruptor
kronotskyensis 2002]
Length = 400
Score = 44.4 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 35/248 (14%), Positives = 89/248 (35%), Gaps = 15/248 (6%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ VA + +FSN+ F ++ +G++IG+ ++I ++S+ G + ++ I ++
Sbjct: 5 IKVAIKSIFSNKLRTF------LTMLGIIIGIASVITIVSLGEGGKTAILGEFEKIGVNI 58
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + + + + + K + V A V+ + +
Sbjct: 59 FSVRPRTDVEITESDRLTVKDVEMIRKRVSSVKYAAPVAQKFGLVKSGKRTKRALFIATD 118
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
V F + +++G+++ S + G +G +
Sbjct: 119 FDYGNVSNLKIVYGRFLNERDILLGRNVVLIDRESAKELFGYEDCVGQTIKVGSSTSFDT 178
Query: 189 YTVLGMFRMRFPD--------YDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
++G+ + M + AQ F+ + +S I V + D +++
Sbjct: 179 AKIIGVIDSSSYRALGGAAADQFPVIAAMPITYAQKIFD-DVTISQIYVMTYNSDQLDEA 237
Query: 241 HENIVRIL 248
+VR+L
Sbjct: 238 TSQVVRLL 245
>gi|260462210|ref|ZP_05810454.1| protein of unknown function DUF214 [Mesorhizobium opportunistum
WSM2075]
gi|259032070|gb|EEW33337.1| protein of unknown function DUF214 [Mesorhizobium opportunistum
WSM2075]
Length = 405
Score = 44.4 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 32/252 (12%), Positives = 75/252 (29%), Gaps = 13/252 (5%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV--LGINGHV 68
++ R + N +F+++ +G++IGV A+I ++++ +G + + + LG N V
Sbjct: 8 LSLRSIRRNVLRSFLTL------LGIVIGVAAVIAMLTIGSGTTQKVKADISKLGSNLLV 61
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
V + + + + + + + V V + S S
Sbjct: 62 VRAGRPAGPGAPGGLDQAVRPLAEKDVAALVAHLSGARAISPASQKQVRVIFGTESLTSG 121
Query: 129 LQNSFSRFYGNVSND-----FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + S + G + P G++ +
Sbjct: 122 VTGTDSAYLDARDWKLVSGRPFSDSETRSGTGVCLIGETVRQQFFGAGDPEGEIIRVNRT 181
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ F + +V M L Q + I + D +
Sbjct: 182 SCKIIGLLEPKGYTGFGQDQDNVVLMPLHAYQRRIAGNRDIDNIYIAADDRTPTTELQPR 241
Query: 244 IVRILGNGVVVI 255
+ IL + +
Sbjct: 242 VEDILRDARRIT 253
>gi|256426028|ref|YP_003126681.1| hypothetical protein Cpin_7079 [Chitinophaga pinensis DSM 2588]
gi|256040936|gb|ACU64480.1| protein of unknown function DUF214 [Chitinophaga pinensis DSM
2588]
Length = 452
Score = 44.4 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 31/53 (58%), Gaps = 6/53 (11%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+ +A L +NR +F ++ +G++ GV A+I ++++ G + +++ ++
Sbjct: 9 LYIALDSLGANRLRSF------LTALGIIFGVAAVIAMLAIGRGAQAEILDQM 55
>gi|171912171|ref|ZP_02927641.1| hypothetical protein VspiD_13365 [Verrucomicrobium spinosum DSM
4136]
Length = 371
Score = 44.4 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 38/246 (15%), Positives = 85/246 (34%), Gaps = 28/246 (11%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ R L + ++ G+ IG+ A++ ++ + G+ + + K++ I +
Sbjct: 4 FTIVTRGLMRRPVR------TGLTLAGISIGIAAVVALVGMAWGYEKSIGKQLDVIGIDM 57
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
++ ++ F A+ I LP + + + +S +
Sbjct: 58 IVSNMTGGIMPKTFDASVETKIAQ----LPKIKETTSLLMQLISVEDAPMIMVSGRKWGG 113
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ + V++G+ A L +GD + + S +
Sbjct: 114 FTWHQLKVVEGRMIKDEHEPAVVLGRLAAEVLKKKVGDTVQLDSDELN------------ 161
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK---DPDAIEKTHENIV 245
+ +NG + +SL Q E V+ I++ +K D DA+ +T I
Sbjct: 162 ---VVGIVDGGSVVENGAIILSLPVMQKVTLNEGKVNFIDIRLKPGSDKDAVTETAAEIK 218
Query: 246 RILGNG 251
+I G
Sbjct: 219 KIFPEG 224
>gi|330955388|gb|EGH55648.1| ABC transporter [Pseudomonas syringae Cit 7]
Length = 379
Score = 44.4 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 38/252 (15%), Positives = 95/252 (37%), Gaps = 10/252 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++AW L S+R + ++ +G++IG+ +++ ++++ G + ++K + I +
Sbjct: 101 AFVMAWVALISHRMR------TLLTMLGIIIGITSVVSIVAIGEGAKRYVLKDIQAIGSN 154
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + + + + DV + + + ++ S
Sbjct: 155 TIEVFPGSDFGDTKSMDIQTLALSDVTALSSEYYIDSATPNIGRNLLVRYRNIDVSATVS 214
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ S+ + G G + A+ + I +I + P D + + +
Sbjct: 215 GVSPSYFQVRGTKMGLG-VGFNKDDARRQAQVVVIDHNTRIRLFGPKVDPLGQVILVGNL 273
Query: 188 SYTVLGMFRMRFPDYDNG---MVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
TV+G+ + +D ++M + A + + GI V VKD + +N+
Sbjct: 274 PCTVIGVTENKKNIFDTSKNLNIWMPYETASGRLLGQTYLDGITVRVKDGQPSKVVEDNV 333
Query: 245 VRILGNGVVVID 256
++L D
Sbjct: 334 NKLLQKRHGTKD 345
>gi|309783412|ref|ZP_07678118.1| ABC efflux pump [Ralstonia sp. 5_7_47FAA]
gi|308917811|gb|EFP63502.1| ABC efflux pump [Ralstonia sp. 5_7_47FAA]
Length = 649
Score = 44.4 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 41/245 (16%), Positives = 89/245 (36%), Gaps = 14/245 (5%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
+ + G G++ + ++ +GF + I+ + ++ DY D
Sbjct: 259 TALMAAGAAFGIVGFVFILGFFDGFFDQTIENSTRYLTGHIQVERKGFRKDYAPELAIDD 318
Query: 89 FIP--------DVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNV 140
+ + + ++ +S G+++ GI + +
Sbjct: 319 AVSLLQAVRGTPGVIAAAPRTQVQALASTASKSEGIMLIGIDPVAEAKVTFISRTVVQGR 378
Query: 141 SNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFP 200
+ + V+IG+ LA LG+ +G+KI +++ + Y V G+F
Sbjct: 379 ALIPGADREVMIGRRLADKLGVRLGEKIVVMAQAANGELGTAA-----YGVGGIFSTESA 433
Query: 201 DYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL-GNGVVVIDWQQ 259
+D +++L AQ L + VS I V ++D + + + G V +I WQ+
Sbjct: 434 SFDGAFAFVTLPAAQSLLALGSRVSTINVRLEDRAHVSAAVALLRARIGGTDVTLIPWQE 493
Query: 260 RYQIF 264
Sbjct: 494 LLPQL 498
>gi|21910101|ref|NP_664369.1| ABC transporter permease [Streptococcus pyogenes MGAS315]
gi|28896201|ref|NP_802551.1| ABC transporter permease [Streptococcus pyogenes SSI-1]
gi|50914011|ref|YP_059983.1| ABC transporter permease protein [Streptococcus pyogenes MGAS10394]
gi|71903293|ref|YP_280096.1| ABC transporter permease protein [Streptococcus pyogenes MGAS6180]
gi|94988333|ref|YP_596434.1| ABC transporter permease protein [Streptococcus pyogenes MGAS9429]
gi|94992211|ref|YP_600310.1| ABC transporter permease protein [Streptococcus pyogenes MGAS2096]
gi|94994132|ref|YP_602230.1| ABC transporter permease protein [Streptococcus pyogenes MGAS10750]
gi|139473987|ref|YP_001128703.1| ABC transporter permease [Streptococcus pyogenes str. Manfredo]
gi|21904293|gb|AAM79172.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315]
gi|28811452|dbj|BAC64384.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
gi|50903085|gb|AAT86800.1| ABC transporter permease protein [Streptococcus pyogenes MGAS10394]
gi|71802388|gb|AAX71741.1| ABC transporter permease protein [Streptococcus pyogenes MGAS6180]
gi|94541841|gb|ABF31890.1| ABC transporter permease protein [Streptococcus pyogenes MGAS9429]
gi|94545719|gb|ABF35766.1| ABC transporter permease protein [Streptococcus pyogenes MGAS2096]
gi|94547640|gb|ABF37686.1| ABC transporter permease protein [Streptococcus pyogenes MGAS10750]
gi|134272234|emb|CAM30486.1| putative permease [Streptococcus pyogenes str. Manfredo]
Length = 406
Score = 44.4 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 30/261 (11%), Positives = 68/261 (26%), Gaps = 20/261 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A ++ ++ S ++ +G++IGV A++++M + N + + +
Sbjct: 4 WKFALSSIWGHKMR------SILTMLGIIIGVAAVVIIMGLGNAMKNSVTSTFSSKQKDI 57
Query: 69 VIQQ-------------KYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSG 115
+ + + D+ + + + S +S
Sbjct: 58 QLYFQEKGEEEDLYAGLHTHENNHEVKPEWLEQIVKDIDGIDSYYFTNSATSTISYEKKK 117
Query: 116 VLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYG 175
V I Y + + L L + + N S
Sbjct: 118 VDNASIIGVSKDYFNIKNYDIVAGRTLTDNDYSNFSRIILLDTVLADDLFGEGNYKSALN 177
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD 235
V + D +G M+ + F + + I + V D
Sbjct: 178 KVVSLSDKDYLVIGVYKTDQTPVSFDGLSGGAVMANTQVASEFGTK-EIGSIYIHVNDIQ 236
Query: 236 AIEKTHENIVRILGNGVVVID 256
+L N + D
Sbjct: 237 NSMNLGNQAADMLTNISHIKD 257
>gi|307297443|ref|ZP_07577249.1| ABC transporter related protein [Thermotogales bacterium
mesG1.Ag.4.2]
gi|306916703|gb|EFN47085.1| ABC transporter related protein [Thermotogales bacterium
mesG1.Ag.4.2]
Length = 791
Score = 44.4 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 23/261 (8%), Positives = 69/261 (26%), Gaps = 26/261 (9%)
Query: 2 SIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
S+ + ++ + + + + ++ + IG++ + +V+S+ +GF + +
Sbjct: 240 SMSFPAALRLSATNILTKKWR------TALTVLASSIGIVGIFLVLSLSSGFGRQLSEFE 293
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
I + ++ + + V GQ + +
Sbjct: 294 SQTLSTFPIMVSQTTVDLESQQYHQAESEKRFEEDDSDVLGQFVYPYDPRDEILIHNNDL 353
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
S+ +Y+++ + + ++ K D G
Sbjct: 354 SDEYLAYVESIDPKLLSGFTYTRHINMNLVAKYGEMAKTVDQTSIKFTAYPEDLDPESPG 413
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFV----KDPDAI 237
+ + + + N +S + + D + I
Sbjct: 414 YLENNFDLVAGSFPK-------------EFTDLVMIVGKGNRISNVILQALGLDHDKERI 460
Query: 238 ---EKTHENIVRILGNGVVVI 255
E I I + +
Sbjct: 461 GFEEIIGLEIKAIYNDDFYLR 481
>gi|254380677|ref|ZP_04996043.1| macrolide export ATP-binding/permease macB [Streptomyces sp. Mg1]
gi|194339588|gb|EDX20554.1| macrolide export ATP-binding/permease macB [Streptomyces sp. Mg1]
Length = 588
Score = 44.4 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 5 SRFE-VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
+ FE + A R L +N+ S ++ +G++IGV A+I++++V NG + + +
Sbjct: 174 NPFEILRFALRGLGANKLR------SGLTTLGILIGVGAVILLVAVGNGSSQQIQDSITR 227
Query: 64 IN 65
+
Sbjct: 228 LG 229
>gi|160897757|ref|YP_001563339.1| ABC transporter-like protein [Delftia acidovorans SPH-1]
gi|160363341|gb|ABX34954.1| ABC transporter related [Delftia acidovorans SPH-1]
Length = 648
Score = 44.4 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 30/272 (11%), Positives = 82/272 (30%), Gaps = 21/272 (7%)
Query: 2 SIFS-RF--EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMI 58
+F RF + +A R + ++R F ++ +G++IG+ A++ V+++ G ++ ++
Sbjct: 249 RMFGDRFGEALRMALRAMNAHRLRTF------LTMLGIIIGISAVVSVVALGRGAQQQVM 302
Query: 59 KRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
++ + + + D + A D + + +S + +
Sbjct: 303 NQISELGTNTLDIFPGKDFGDTRAAAIETLVAADAQALAEQPYVDSATPNVSVSVTALYR 362
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL-SPYGDV 177
+ + + + R G + + +P
Sbjct: 363 ENAAMAQVTGVGFEHFRVKGLRLASGRFFDQRDVDLHAQVAVIDQKAATALFPGNPSPLG 422
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
+ +G + ++ A + + I + +KD
Sbjct: 423 EVVMLGEMPVEIVGVLRPAQNSFGGSTPTFFVPYTAAATRLVGKYHLDSITLRIKDEVPA 482
Query: 238 EKTHENIVRILGNGVVVIDWQQRYQI--FFSC 267
E + +L +R+ FF
Sbjct: 483 EIALKAATSLL---------TERHGTKDFFVW 505
>gi|328953302|ref|YP_004370636.1| protein of unknown function DUF214 [Desulfobacca acetoxidans DSM
11109]
gi|328453626|gb|AEB09455.1| protein of unknown function DUF214 [Desulfobacca acetoxidans DSM
11109]
Length = 852
Score = 44.4 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 30/242 (12%), Positives = 75/242 (30%), Gaps = 16/242 (6%)
Query: 14 RYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQK 73
RYL + + +SIA+ + +G++I V+A+I FR+ + V+ +
Sbjct: 476 RYLSGSLSRSAVSIAALSTALGLVIAVVAMI------GSFRQTVDDWVMRSISGDIFFGP 529
Query: 74 YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSF 133
+VL + ++ L L
Sbjct: 530 AVFSTAG-------YDQFLPPEVLRDLQRDDRIADLYHYRCVRLPFKDRYILVIGGSFDI 582
Query: 134 SRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLG 193
+G + +G + + ++ G+ + + + G
Sbjct: 583 LERHGGLWFLSGDPRGTVARARSEGQILVTEPFAETFGVEEGEWVDLPTPSGPQRLQIAG 642
Query: 194 MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVV 253
+F D V+M Q F ++ ++ + +++KD ++ ++ +
Sbjct: 643 VFY--DYRTDGAAVWMDRGLFQK-FWHDDRLNAVRIYLKDQGRTKEFQADLRQKYQGRYR 699
Query: 254 VI 255
+
Sbjct: 700 LS 701
>gi|325474985|gb|EGC78171.1| permease [Treponema denticola F0402]
Length = 412
Score = 44.4 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 41/259 (15%), Positives = 73/259 (28%), Gaps = 27/259 (10%)
Query: 7 FEVIV-AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSV-----------MNGFR 54
FE + A +N+ + +S +G++IGV ++I+V S+ F
Sbjct: 2 FEDFINALHNFRTNKMR------TLLSLLGIVIGVTSVIIVTSLASSLSNSMIKEFEEFS 55
Query: 55 EDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
D+I + + D F + IP++ V + QA +
Sbjct: 56 MDIINIGTQADNPEFAGEGKIIKFDEAFRKKLMQKIPEIKHVFYSNTFQASIIRNDLRIE 115
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVII---GKDLARNLGISIGDKINIL 171
+ GI + S+D+ G I K L
Sbjct: 116 ISDIEGIEAERLESHRVVMDYGSFFSSSDYSTGAEKAIIGERIAFQLFPEGRAVGKFITL 175
Query: 172 SPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSG----I 227
I + + + + V++ + L VS
Sbjct: 176 QIPSSSEKSPPLIVRLQVIGVVKPKNTWVIRTSDAVFVPRKF--ALSRLPGKVSEAVWAA 233
Query: 228 EVFVKDPDAIEKTHENIVR 246
EV + DP K I
Sbjct: 234 EVAISDPKDSSKVEVKIQD 252
>gi|304413816|ref|ZP_07395233.1| putative permease compontent of ABC-type antimicrobial
peptide/macrolide transport system [Candidatus Regiella
insecticola LSR1]
gi|304283536|gb|EFL91931.1| putative permease compontent of ABC-type antimicrobial
peptide/macrolide transport system [Candidatus Regiella
insecticola LSR1]
Length = 649
Score = 44.4 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 22/243 (9%), Positives = 77/243 (31%), Gaps = 8/243 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+++AW + +++ + ++ +G++IG+ +++ ++ + ++ ++ + I +
Sbjct: 258 ALLMAWCAMMTSKMR------TGLTMLGIIIGIASVVFILVIGEAAQKKVLADIRAIGTN 311
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + R D+ + ++S
Sbjct: 312 TIHIYPGEDYGDDEPSHLRSLTANDLEALTAQPYIDVISPLIASSMRLRSRNVDVAGHVF 371
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + +G + + + + ++ + +
Sbjct: 372 GVNGQYFHVFGMTMAQGSVISQYQVDQQSQVVVIDNNTQRLLFPHLENVVGQVILIGNMP 431
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ V+ F + V++ + N + I V +KD + + +V
Sbjct: 432 ATVIGVVRKKPSMFNNSQTLQVWVPYRTMSKRLNGKFYFDSITVRIKDGYDSKDVEQKLV 491
Query: 246 RIL 248
R+L
Sbjct: 492 RLL 494
>gi|284007907|emb|CBA73852.1| macrolide-specific ABC-type efflux carrier [Arsenophonus nasoniae]
Length = 680
Score = 44.4 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 25/243 (10%), Positives = 79/243 (32%), Gaps = 8/243 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+++AWR + N+ + ++ +G++IG+ +++ ++ + N + ++ + I +
Sbjct: 289 ALLMAWRAILINKMR------TLLTMLGIIIGIASVVSILVIGNAAKGLVLADIQSIATN 342
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D R + DV + S A +S+ S +
Sbjct: 343 TITVFPGRGFGDMSPQDRRALKVSDVDALQNQPSVLAISGKMSTDVRLRYGNQNSAARAF 402
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINI--LSPYGDVTPMGMGIR 185
+ S+ Y ++ ++ + + + I
Sbjct: 403 GIGESYFDVYAMPMSEGIILTRDMVKHHAQVIVIDQNTKNMFFPQHKQVVGEVMLVGNIP 462
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
V + + + + ++M + +++ +K + + + +
Sbjct: 463 VTIVGVAAEQKSMYGNSNMLQIWMPYTTMSSRLMNRSYFDNLDIRIKQGYSSLEAEQQLT 522
Query: 246 RIL 248
R+L
Sbjct: 523 RLL 525
>gi|160902279|ref|YP_001567860.1| hypothetical protein Pmob_0813 [Petrotoga mobilis SJ95]
gi|160359923|gb|ABX31537.1| protein of unknown function DUF214 [Petrotoga mobilis SJ95]
Length = 402
Score = 44.4 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Query: 13 WRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQ 72
+R L SN+ F +S +G++IGV A++ ++++ +G R+++ V + ++++
Sbjct: 8 FRSLRSNKLRTF------LSMLGIIIGVGAVMTIIAIGDGARQEINNTVSSLGSNIIMVN 61
Query: 73 KYYPLVDYQFIANRLDFIPDVIKV 96
D I V
Sbjct: 62 STVYSRFSSQPLEFQDAINIKNMV 85
>gi|94971403|ref|YP_593451.1| ABC efflux pump, inner membrane subunit [Candidatus Koribacter
versatilis Ellin345]
gi|94553453|gb|ABF43377.1| ABC efflux pump, inner membrane subunit [Candidatus Koribacter
versatilis Ellin345]
Length = 411
Score = 44.4 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 24/214 (11%), Positives = 58/214 (27%), Gaps = 6/214 (2%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M I + ++A + S++ +F+ + +GV++ VM LI+V+S++NG +
Sbjct: 1 MKINFKEPTLIALETMRSHKLRSFLML------LGVILSVMTLILVISLVNGVNVYFADK 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
V + V ++ + + + + + GS
Sbjct: 55 VANMGAGVFRVNRFGIINSEEAWVKAQRTNRKMTWEDYELLRDNLTLPKAVAGSVHNHGS 114
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
L++ + + + P
Sbjct: 115 KVRVGNQSLEDVSVNGMTGNYAYMATEEVANGRWPTDSDDEHRAEVAFIGSEVADKLFPG 174
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEA 214
+ F + G + Q+
Sbjct: 175 QDPLNKPLMVDGHEFTVIGVAKSIGTAFGQSQDN 208
>gi|222147972|ref|YP_002548929.1| ABC transporter nucleotide binding/ATPase protein [Agrobacterium
vitis S4]
gi|221734960|gb|ACM35923.1| ABC transporter nucleotide binding/ATPase protein [Agrobacterium
vitis S4]
Length = 647
Score = 44.4 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 28/244 (11%), Positives = 80/244 (32%), Gaps = 9/244 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++A R L S+R F ++ +G++IG+ +++ V+++ G ++ ++ + G+ +
Sbjct: 255 AFMMAVRALASHRLRTF------LTMLGIIIGIASVVSVVALGAGTQQKVLSNINGLGTN 308
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + + D + A +S+ G+ ++N +
Sbjct: 309 TLEIFPGKGFGDTRSGKITTLKVGDADALARLSYVSAVTPTVSTSGTVRYGATVANVLVN 368
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ + + G+ + + K + +
Sbjct: 369 GVGDQYFTAKGSKLLAGRLFDHASVVAMTQEAVIDQNAAKALFGDDSARALGHTVFLTDV 428
Query: 188 SYTVLGMFRMRFPDYDNG---MVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
++G+ + + + Y+ Q F + ++ I V + D +
Sbjct: 429 PVRIVGVIEAQQGGFGSNSNLQAYLPYSSVQARFLGDLSLRSITVRLDDSVDSSVAESAV 488
Query: 245 VRIL 248
L
Sbjct: 489 TTFL 492
>gi|71909078|ref|YP_286665.1| hypothetical protein Daro_3466 [Dechloromonas aromatica RCB]
gi|71848699|gb|AAZ48195.1| Protein of unknown function DUF214 [Dechloromonas aromatica RCB]
Length = 399
Score = 44.4 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +A R + + R +F+++ +G+ +G+ A+I++ S+ G ++
Sbjct: 1 MLWSDAFQLALRAITAQRLRSFLTL------LGIAVGIAAVILLTSIGEGIHRFVLGEFT 54
Query: 63 GINGHVV 69
+V+
Sbjct: 55 QFGTNVI 61
>gi|222530544|ref|YP_002574426.1| hypothetical protein Athe_2588 [Caldicellulosiruptor bescii DSM
6725]
gi|222457391|gb|ACM61653.1| protein of unknown function DUF214 [Caldicellulosiruptor bescii DSM
6725]
Length = 400
Score = 44.4 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 34/248 (13%), Positives = 89/248 (35%), Gaps = 15/248 (6%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ VA + +FSN+ F ++ +G++IG+ ++I ++S+ G + ++ I ++
Sbjct: 5 IKVAIKSIFSNKLRTF------LTMLGIIIGIASVITIVSLGEGGKTAILGEFEKIGVNI 58
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + + + + + K + V A V+ + +
Sbjct: 59 FSVRPRTDVEITESDRLTVKDVEMIRKRVSSVKYAAPVAQKFGLVKSGKRTKKAIFIATD 118
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ F + +++G+++ S + G +G +
Sbjct: 119 FDYGNVSNLKIIYGRFLNERDILLGRNVVLIDRESAKELFGYEDCVGQTIKVGSSTSFDT 178
Query: 189 YTVLGMFRMRFPD--------YDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
++G+ + M + AQ F+ + +S I V + D +++
Sbjct: 179 AKIIGVIDSGSYRVLGGAAADQFPVIAAMPITYAQKIFD-DVTISQIYVMTYNSDQLDEA 237
Query: 241 HENIVRIL 248
+VR+L
Sbjct: 238 TSQVVRLL 245
>gi|56477740|ref|YP_159329.1| putative ABC transporter protein [Aromatoleum aromaticum EbN1]
gi|56313783|emb|CAI08428.1| putative ABC transporter protein [Aromatoleum aromaticum EbN1]
Length = 399
Score = 44.4 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A R L ++R +F+++ +G+ +G+ A+I++ S+ G + ++K ++
Sbjct: 7 LQLALRSLVAHRLRSFLTL------LGIGVGIAAVILLTSIGEGLHQFVLKEFTQFGTNI 60
Query: 69 VI 70
+
Sbjct: 61 IQ 62
>gi|229543127|ref|ZP_04432187.1| protein of unknown function DUF214 [Bacillus coagulans 36D1]
gi|229327547|gb|EEN93222.1| protein of unknown function DUF214 [Bacillus coagulans 36D1]
Length = 393
Score = 44.4 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
A R L +NR+ S ++ +G++IG+ ++I ++S+ G + +K + N
Sbjct: 7 FFTAIRSLLANRRR------SILTMLGIVIGIASVITIISLGKGVEKATLKNLQASN 57
>gi|66045854|ref|YP_235695.1| ABC transporter [Pseudomonas syringae pv. syringae B728a]
gi|81308199|sp|Q4ZT65|MACB2_PSEU2 RecName: Full=Macrolide export ATP-binding/permease protein MacB 2
gi|63256561|gb|AAY37657.1| ABC transporter:Protein of unknown function DUF214 [Pseudomonas
syringae pv. syringae B728a]
Length = 653
Score = 44.4 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 38/252 (15%), Positives = 95/252 (37%), Gaps = 10/252 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++AW L S+R + ++ +G++IG+ +++ ++++ G + ++K + I +
Sbjct: 262 AFVMAWVALISHRMR------TLLTMLGIIIGITSVVSIVAIGEGAKRYVLKDIQAIGSN 315
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + + + + DV + + + ++ S
Sbjct: 316 TIEVFPGSDFGDTKSMDIQTLALSDVAALSSEYYIDSATPNIGRNLLVRYRNIDVSATVS 375
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ S+ + G G + A+ + I +I + P D + + +
Sbjct: 376 GVSPSYFQVRGTKMGLG-VGFNKDDARRQAQVVVIDHNTRIRLFGPKVDPLGQVILVGNL 434
Query: 188 SYTVLGMFRMRFPDYDNG---MVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
TV+G+ + +D ++M + A + + GI V VKD + +N+
Sbjct: 435 PCTVIGVTENKKNIFDTSKNLNIWMPYETASGRLLGQTYLDGITVRVKDGQPSKVVEDNV 494
Query: 245 VRILGNGVVVID 256
++L D
Sbjct: 495 NKLLQKRHGTKD 506
>gi|238749795|ref|ZP_04611300.1| Macrolide export ATP-binding/permease protein macB 2 [Yersinia
rohdei ATCC 43380]
gi|238712450|gb|EEQ04663.1| Macrolide export ATP-binding/permease protein macB 2 [Yersinia
rohdei ATCC 43380]
Length = 649
Score = 44.4 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 24/243 (9%), Positives = 79/243 (32%), Gaps = 8/243 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+++AWR + +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 258 ALLMAWRAMSANKMR------TALTMLGIIIGIASVVSILVVGDAAKQMVLADIRAIGTN 311
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+ + A ++ + S
Sbjct: 312 TIDVYPGKDFGDDDPSTRQALVYDDMAALKAQSYVSAVSPTIAGSMRLRYGNIDVAASVS 371
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + R YG + + + + + +
Sbjct: 372 GVSEQYFRVYGMKLEQGTAITREQVERQSQVAVIDRNTQRRLFPHLKEVVGQVILVGNMP 431
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ V+ + F +++ + I V +K+ + ++ + +V
Sbjct: 432 ATVVGVVEEKQSMFGSSKALRIWVPYSTMANRLMGRSYFDSITVRIKEGYSSKEAEQQLV 491
Query: 246 RIL 248
R+L
Sbjct: 492 RLL 494
>gi|327311289|ref|YP_004338186.1| hypothetical protein TUZN_1398 [Thermoproteus uzoniensis 768-20]
gi|326947768|gb|AEA12874.1| hypothetical protein TUZN_1398 [Thermoproteus uzoniensis 768-20]
Length = 407
Score = 44.4 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 40/264 (15%), Positives = 81/264 (30%), Gaps = 14/264 (5%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
E+ +AW+ L+ + + + +GVMI AL + +SV N F+ + G
Sbjct: 4 ELSLAWKALWERKGR------TIGTIVGVMIAFAALSLAVSVGNSFKASTQEFFASSFGV 57
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
I D P V+ V+P S V + + G+ + S
Sbjct: 58 NNIYIVGQSFTDADVATITSYISPYVVAVVPVASAPVTVQVPGGESTAATLYGVPAQNIS 117
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
L + + + G + + G + + ++ G
Sbjct: 118 ALIPNTALYAGTDAVAGPITLVGY-----YVAFDEATGQQRLYVGTPIVLSYRGRTHTLV 172
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ ++ V + + E + + + I V ++ D + + + I
Sbjct: 173 TGGIIAAGAPNPALNTMTAVVVDINEFRSITGI-DTYRTIVVTLRSQDDLAQIQSLLKSI 231
Query: 248 LGNG--VVVIDWQQRYQIFFSCYE 269
N Q FF+ E
Sbjct: 232 FPNAEVFSPQSISQTITAFFTGLE 255
>gi|238792423|ref|ZP_04636057.1| Macrolide export ATP-binding/permease protein macB [Yersinia
intermedia ATCC 29909]
gi|238728349|gb|EEQ19869.1| Macrolide export ATP-binding/permease protein macB [Yersinia
intermedia ATCC 29909]
Length = 649
Score = 44.4 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 22/243 (9%), Positives = 79/243 (32%), Gaps = 8/243 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+++AWR + +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 258 ALLMAWRAMSANKMR------TALTMLGIIIGIASVVSILVVGDAAKQLVLADIRAIGTN 311
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+ + A ++ + S
Sbjct: 312 TIDVYPGKDFGDDDPSTRQALVYDDMAALKAQSYVSAVSPTIAGSMRLRYGNIDVAASVS 371
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK--INILSPYGDVTPMGMGIR 185
+ + R +G + + + + + + +
Sbjct: 372 GVSEQYFRVFGMKLEQGTAITHEQVERQSQVAVIDRNTQRRLFPHMKDVVGQVILVGNMP 431
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ V+ + F +++ I + +K+ + ++ + +V
Sbjct: 432 ATVVGVVEEKQSMFGSSKALRIWVPYSTMASRLMGRAYFDSITIRIKEGYSSKEAEQQLV 491
Query: 246 RIL 248
R+L
Sbjct: 492 RLL 494
>gi|315187323|gb|EFU21079.1| protein of unknown function DUF214 [Spirochaeta thermophila DSM
6578]
Length = 400
Score = 44.4 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 39/263 (14%), Positives = 79/263 (30%), Gaps = 12/263 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + R+ + + V I V AL V+ ++ G R +
Sbjct: 2 MFLKMAALSLLRHKRR----------TVLIVAAVAIAVAALQVLGGMLEGMRVRFFASLT 51
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
GH+ + K Y + + L + + + + G + G
Sbjct: 52 EETGHLQMTGKGYRESLNPYDLSILVSPDIMPALERKAGVVRAEAMIRFGAVLIGSEGRH 111
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + FY V D + + + +
Sbjct: 112 VMVEGVGLDPGTGFYPRVREDLEGRFLSRKTGVVISRRMARLLWVGRGDEVFLLSEGPLG 171
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
++ V G+F +D MV++S + AQ + + V+ I V P+ +
Sbjct: 172 EPYYLAFVVEGLFSTDSTSFDERMVFVSREAAQELLGI-SEVTEIRVVCDSPEHADAVKA 230
Query: 243 NIVRILGN-GVVVIDWQQRYQIF 264
I +L G V W++
Sbjct: 231 EIAPLLEQWGAEVWTWKELQGSL 253
>gi|289753045|ref|ZP_06512423.1| adhesion component transport transmembrane protein ABC transporter
[Mycobacterium tuberculosis EAS054]
gi|308379927|ref|ZP_07669076.1| efflux ABC transporter, permease protein [Mycobacterium
tuberculosis SUMu011]
gi|289693632|gb|EFD61061.1| adhesion component transport transmembrane protein ABC transporter
[Mycobacterium tuberculosis EAS054]
gi|308363132|gb|EFP51983.1| efflux ABC transporter, permease protein [Mycobacterium
tuberculosis SUMu011]
Length = 688
Score = 44.4 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 75/248 (30%), Gaps = 18/248 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
AWR L + +G+ +GV +IV + V + +
Sbjct: 13 WRTAWRRLRQRP------FQYILLVLGIALGVA-MIVAIDVSSNSAQRAFDLSAAAITGK 65
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ P + G GL + +
Sbjct: 66 STHRLVSGPAGVDQQLYVDLRRHGYDFSAPVIEGYVLARGLGNRAMQFMGTDPFAESAFR 125
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
++ + R GV++ + +A+ G+++GD+I + G
Sbjct: 126 SPLWSNQNIAELGGFLTRPNGVVLSRQVAQKYGLAVGDRIALQ-------VKGAPTTVTL 178
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+L + ++ + AQ F++ +S I++ +KD E T I + L
Sbjct: 179 VGLLTPADEVSNQKLSDLIIADISTAQELFHMPGRLSHIDLIIKD----EATATRIQQRL 234
Query: 249 GNGVVVID 256
GV +
Sbjct: 235 PAGVRMET 242
>gi|254788465|ref|YP_003075894.1| FtsX family membrane protein [Teredinibacter turnerae T7901]
gi|237687062|gb|ACR14326.1| FtsX family membrane protein [Teredinibacter turnerae T7901]
Length = 417
Score = 44.4 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 29/238 (12%), Positives = 62/238 (26%), Gaps = 9/238 (3%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
+ ++ GV G+ L+ ++ V NG R + NG V + + R
Sbjct: 23 TLLTAFGVFWGIFMLVNLVGVGNGLRNGAEASMSLKNGIYVWSGRPTSMPYKGLSKGRSV 82
Query: 89 FIPDVIKVLPF-------VSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVS 141
+ D V G G S ++ +
Sbjct: 83 RLDDDDIAALRNQVPGLDVIAPGNGMGSQFTVHGSRNDSFETSGVWPVEMVTKGYDLLAG 142
Query: 142 NDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPD 201
+ + K + +P G + + V +
Sbjct: 143 RLLNELDLAQLRKVAVIGERVQEVLFAQDENPIGAMIEVAGVKFKVVGVVRPQALNGWAQ 202
Query: 202 YDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVV--IDW 257
D +++ + FN + + + + E + ++ +L V DW
Sbjct: 203 RDMSKIFLPHSTLRKTFNQGDRIHVFTLTTRPGFEPEAVEQAVLSVLKERHKVHPQDW 260
>gi|157370104|ref|YP_001478093.1| ABC transporter-like protein [Serratia proteamaculans 568]
gi|157321868|gb|ABV40965.1| ABC transporter-related protein [Serratia proteamaculans 568]
Length = 646
Score = 44.4 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 33/259 (12%), Positives = 82/259 (31%), Gaps = 12/259 (4%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A + + ++R + ++ G++ G+ A++ V+++ G ++ ++ + + +
Sbjct: 257 SLQMALKAMNAHRLR------TALTMTGIIFGIAAVVTVVALGEGAKQRTLESIKSLGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
VV D I + +P L S VS + + R S +
Sbjct: 311 VVSIYPGRDFFD-DAIDSIRTLVPADADALARQSFVDSVSPEVTASDSIHFRSKSANASI 369
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
++ R + + + + +
Sbjct: 370 TGVGRDYLRVNGLTLLQGRNFQDDRNALQEVIIDENARQSLFGDFGVEPLGQIVFLGAVP 429
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ + + + + V+M + +S I V +KD A E I ++
Sbjct: 430 ARVIGVVQSNQDSAPNRIRVWMPYTTVMYRMVGQTKLSSISVRLKDDVANEAAVTAIEQL 489
Query: 248 LGNGVVVIDWQQRYQIFFS 266
L V D+ F+
Sbjct: 490 LTQRHGVKDFM-----LFN 503
>gi|317132360|ref|YP_004091674.1| protein of unknown function DUF214 [Ethanoligenens harbinense
YUAN-3]
gi|315470339|gb|ADU26943.1| protein of unknown function DUF214 [Ethanoligenens harbinense
YUAN-3]
Length = 399
Score = 44.4 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 31/244 (12%), Positives = 68/244 (27%), Gaps = 11/244 (4%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVM----NGFREDMIKRVLGINGH 67
A R L + + +G++IGV ++I++ S+ N + +
Sbjct: 12 AVRNLGRKPLR------TGMMIMGIVIGVASVILISSIGESGRNAITSQLNSLGMDGLNI 65
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + + V V+P + + ++ +
Sbjct: 66 QAASAVSSQSALHDIDVQKSRQVKGVKAVMPIIMQMGGAQIRNVQKQALIWGIGEQARQM 125
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ S+ + ++ AR ++ + + T M I+
Sbjct: 126 QTVHLLYGSMLTKSDVQNAANVCLVEDAFARAAYKRSNIVGKTITVFVNSTSTTMKIKGI 185
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
GMF +Y +Y+ A+ E+ I V + IV
Sbjct: 186 VANGSGMFYNLVGNYIPSFLYIPYTTAENLRG-EDGYDQIAVQTYSESNNDLIGNRIVSA 244
Query: 248 LGNG 251
L
Sbjct: 245 LSTD 248
>gi|116493378|ref|YP_805113.1| peptide ABC transporter ATPase [Pediococcus pentosaceus ATCC 25745]
gi|116103528|gb|ABJ68671.1| ABC-type antimicrobial peptide transport system, ATPase component
[Pediococcus pentosaceus ATCC 25745]
Length = 645
Score = 44.4 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 30/244 (12%), Positives = 63/244 (25%), Gaps = 11/244 (4%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
R + +A +++ N K + G IG+ ++I+++ + NG M ++
Sbjct: 247 RASLRMALKHMSYNFKRN------LLIIFGASIGIFSVILMLGLGNGVTGYMNDQISSQI 300
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+Q + D + + + V S V G +
Sbjct: 301 NPTAVQVAKNVTQEQMENGETADLSNTDYQRMNKIKNVKSVERGYYVQSAKTVAGKKSIS 360
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
LQ + I L + K + +
Sbjct: 361 LQVLQTWNKTEREGDIKYGSKPGNGEIL--LDKATAKKFDKKYKNVVGKKITVFVTTVDS 418
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN---AVSGIEVFVKDPDAIEKTHE 242
K L +G + + F +N + V V + ++
Sbjct: 419 KKQPVQLQKEVTVSGVITSGTSAIDYNTLKEMFKDKNLDYQPNFFTVNVNNTQNVKSVQN 478
Query: 243 NIVR 246
I
Sbjct: 479 KIKN 482
>gi|268318080|ref|YP_003291799.1| hypothetical protein Rmar_2535 [Rhodothermus marinus DSM 4252]
gi|262335614|gb|ACY49411.1| protein of unknown function DUF214 [Rhodothermus marinus DSM 4252]
Length = 412
Score = 44.4 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHENIV 245
+ + V+G+FR D+D M ++ + A+ L +A + V + D + +
Sbjct: 184 EVFRVVGLFRTVSADFDRTMAFIPIDRARAMLGLPPDAAHELAVLLDDVRQADALKTRLQ 243
Query: 246 RILGNGVVVIDWQQ 259
L + + V+ ++
Sbjct: 244 AALPDTLEVLTYRD 257
>gi|302878973|ref|YP_003847537.1| hypothetical protein Galf_1762 [Gallionella capsiferriformans
ES-2]
gi|302581762|gb|ADL55773.1| protein of unknown function DUF214 [Gallionella capsiferriformans
ES-2]
Length = 406
Score = 44.0 bits (101), Expect = 0.019, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
AWR + +NR + ++ +G++IGV A++++MS+ G + + + + + +
Sbjct: 9 AWRAMGANRMR------TVLTMLGMVIGVAAVVLMMSIGQGAQYAIKQSISAMGSN 58
>gi|312876315|ref|ZP_07736301.1| protein of unknown function DUF214 [Caldicellulosiruptor
lactoaceticus 6A]
gi|311796961|gb|EFR13304.1| protein of unknown function DUF214 [Caldicellulosiruptor
lactoaceticus 6A]
Length = 402
Score = 44.0 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 35/254 (13%), Positives = 91/254 (35%), Gaps = 15/254 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ + + VA + +FSN+ F ++ +G++IG+ ++I ++S+ G + ++
Sbjct: 1 MYIKELIKVAIKSIFSNKLRTF------LTMLGIIIGIASVITIVSLGEGGKTAILGEFE 54
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
I ++ + + + + + + K + V A V+ +
Sbjct: 55 KIGVNIFSVRPRTDVEITESDRLTVKDVEMIRKRVSSVKYAAPVAQKFGLVKPGKRTKRA 114
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ V F + +++G+++ S + G +G
Sbjct: 115 LFIATDFDYGNVSNLKIVYGRFLNERDILLGRNVVLIDRESAKELFGYEDCVGQTIKVGS 174
Query: 183 GIRSKSYTVLGMFRMRFPD--------YDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
+ ++G+ + M + AQ F+ + +S I V
Sbjct: 175 STSFDTAKIIGVIDSGSYRALGGAAADQFPVIAAMPITYAQKIFD-DVTISQIYVMTYKS 233
Query: 235 DAIEKTHENIVRIL 248
D +++ +VR+L
Sbjct: 234 DQLDEATSQVVRLL 247
>gi|308370105|ref|ZP_07666865.1| efflux ABC transporter, permease protein [Mycobacterium
tuberculosis SUMu002]
gi|308370563|ref|ZP_07666966.1| efflux ABC transporter, permease protein [Mycobacterium
tuberculosis SUMu003]
gi|308325354|gb|EFP14205.1| efflux ABC transporter, permease protein [Mycobacterium
tuberculosis SUMu002]
gi|308331525|gb|EFP20376.1| efflux ABC transporter, permease protein [Mycobacterium
tuberculosis SUMu003]
Length = 688
Score = 44.0 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 75/248 (30%), Gaps = 18/248 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
AWR L + +G+ +GV +IV + V + +
Sbjct: 13 WRTAWRRLRQRP------FQYILLVLGIALGVA-MIVAIDVSSNSAQRAFDLSAAAITGK 65
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ P + G GL + +
Sbjct: 66 STHRLVSGPAGVDQQLYVDLRRHGYDFSAPVIEGYVLARGLGNRAMQFMGTDPFAESAFR 125
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
++ + R GV++ + +A+ G+++GD+I + G
Sbjct: 126 SPLWSNQNIAELGGFLTRPNGVVLSRQVAQKYGLAVGDRIALQ-------VKGAPTTVTL 178
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+L + ++ + AQ F++ +S I++ +KD E T I + L
Sbjct: 179 VGLLTPADEVSNQKLSDLIIADISTAQELFHMPGRLSHIDLIIKD----EATATRIQQRL 234
Query: 249 GNGVVVID 256
GV +
Sbjct: 235 PAGVRMET 242
>gi|255533015|ref|YP_003093387.1| hypothetical protein Phep_3129 [Pedobacter heparinus DSM 2366]
gi|255345999|gb|ACU05325.1| protein of unknown function DUF214 [Pedobacter heparinus DSM 2366]
Length = 406
Score = 44.0 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 34/262 (12%), Positives = 71/262 (27%), Gaps = 15/262 (5%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + +A + L N+ + ++ +G++IGV ++I +MS+ G ++ +
Sbjct: 1 MKFINLI--RLAIKALQRNKLR------ALLTMLGIIIGVASVITMMSIGEGSKQSINAS 52
Query: 61 VLGINGHVVIQQKY-------YPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGG 113
+ + +++ Y + + D + VS
Sbjct: 53 LASMGSNMITIMPYSNVPGGARMMGNSFKTLTLKDVEALKKNAVNIAEISPLVSSSGQSI 112
Query: 114 SGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSP 173
SG S S + F K + N P
Sbjct: 113 SGPNNWPTSIQGVSPAYLDIRKLVVKDGIIFSDQDIRSSAKVCLLGKTVIDNLFPNGDDP 172
Query: 174 YGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKD 233
G + G T++ F + ++ Q + I
Sbjct: 173 IGKIIRFGKIPFQVIGTLVPKGTSNFGQDQDDIIIAPYTTVQKRITSSIYFNQIYASATS 232
Query: 234 PDAIEKTHENIVRILGNGVVVI 255
A + I IL + +
Sbjct: 233 EAASDAAVAEITSILKDTHRIR 254
>gi|239833859|ref|ZP_04682187.1| Macrolide export ATP-binding/permease protein macB [Ochrobactrum
intermedium LMG 3301]
gi|239821922|gb|EEQ93491.1| Macrolide export ATP-binding/permease protein macB [Ochrobactrum
intermedium LMG 3301]
Length = 653
Score = 44.0 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 29/251 (11%), Positives = 82/251 (32%), Gaps = 11/251 (4%)
Query: 3 IFSRF--EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
++ RF +A R + ++R F ++ +G++IG +++ V+++ G ++ ++++
Sbjct: 254 MWDRFNEAFSMALRSMNAHRLRTF------LTMLGIIIGTASVVCVVALGQGSQKQILEQ 307
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + + + D + + D ++ A S+ + +
Sbjct: 308 ISDLGTNTLYISPGKGFGDLKAALITTLNLADATEIAKLPYVLAATPSSSTSSTIRVEDK 367
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ S + + + + + + K G V
Sbjct: 368 EVSVSVSGVGADYFVTRNSKLLEGRFFDQRNVNDLAQVAVVDETARKTLFPHEAGSVVGK 427
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGM---VYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
+ + ++G+ + + VY+ Q ++ I V V D
Sbjct: 428 TILLSKVPVRIVGVVKAEERGMGSAQRLEVYVPYTTVQTRMTGSRSLQMILVRVADTMDP 487
Query: 238 EKTHENIVRIL 248
+ + I L
Sbjct: 488 SEAEKLITAFL 498
>gi|91772901|ref|YP_565593.1| hypothetical protein Mbur_0895 [Methanococcoides burtonii DSM 6242]
gi|91711916|gb|ABE51843.1| protein of unknown function DUF214 [Methanococcoides burtonii DSM
6242]
Length = 400
Score = 44.0 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 35/258 (13%), Positives = 85/258 (32%), Gaps = 12/258 (4%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK---RVLGING 66
+A++ L K F+ I + ++ + I A S+++G + + + +
Sbjct: 11 FLAYKNLV-KSKTTFMVIVAVLAMSFLSITFFA-----SIIDGLGYEFEEGMIKGQTGHL 64
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
+ Q+ + + + + + + IP V+ V + S ++ +
Sbjct: 65 MIEPQEDHPYISNSENLMKNIRRIPGVVGVSRRLDASVVARHKSVEMGIPMLFIEPQN-E 123
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ + ++IG DL ++ + + GD +
Sbjct: 124 RKVSAYWDSIILGEYISEKDSDELLIGADLVKSYAQEDDTQKRLDVNVGDKITLSFSNGV 183
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHENIV 245
+ + + + ++ E Q F EN S I V + + E+ I+
Sbjct: 184 VKEYKIKGIYKTGSRFSDDKLIVNFDEYQSIFGSSENIASNILVRLPERGMEEQYKTKII 243
Query: 246 RILGNGVVVIDWQQRYQI 263
LG + +WQ +
Sbjct: 244 D-LGVTEQINNWQTKMGA 260
>gi|225175212|ref|ZP_03729208.1| protein of unknown function DUF214 [Dethiobacter alkaliphilus AHT
1]
gi|225169388|gb|EEG78186.1| protein of unknown function DUF214 [Dethiobacter alkaliphilus AHT
1]
Length = 398
Score = 44.0 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 23/250 (9%), Positives = 82/250 (32%), Gaps = 16/250 (6%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A+ L + + + + +G++IGV +++ ++S++ R ++ R+ ++VI
Sbjct: 6 IAFSNLKRRK------VKALLVALGLIIGVASVVALLSIVEAMRLELGDRLDEFGANIVI 59
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF---- 126
+ + +D + + + + + + + +
Sbjct: 60 LPQAEGTQLTYGGVHTVDVSYNTESLTEDDLPKIDTIPERKSINIIQPKLVGAVEAGDKP 119
Query: 127 -----SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ + ++ + L + + + +
Sbjct: 120 ALLVGGDISQEATLKPWFSLAEYAGAPEEPVPDLAFWELPEDGVLLGSATARALEKSAGD 179
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK-DPDAIEKT 240
+ + ++ + ++G+++ +L AQ +S IE+ + +E+
Sbjct: 180 TILLNDKQFMVYGVFNQTGGQEDGLIFTALPTAQRLLGRPGQLSMIEIAAYCNFCPVEEA 239
Query: 241 HENIVRILGN 250
+ +L N
Sbjct: 240 VAQLSDVLPN 249
>gi|319786351|ref|YP_004145826.1| hypothetical protein Psesu_0742 [Pseudoxanthomonas suwonensis 11-1]
gi|317464863|gb|ADV26595.1| protein of unknown function DUF214 [Pseudoxanthomonas suwonensis
11-1]
Length = 409
Score = 44.0 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 32/236 (13%), Positives = 73/236 (30%), Gaps = 10/236 (4%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKR-----VLGINGHVVIQQKYYPLVDYQFI 83
S ++ +GV+IG+ A+IV++SV G + ++ ++ ++ +Q+ +
Sbjct: 21 SALTSLGVIIGIAAVIVMVSVGQGTQAEIERQLAGLGAQKLDIGPQVQRSMGGVRMSASS 80
Query: 84 ANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSND 143
L + + L V ++ + +Q F G
Sbjct: 81 FYTLTEGDAEAIREEIPEVELVSASLRGSSQIVFAENNWSTSWQGIQQDFLEINGWRIAS 140
Query: 144 FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYD 203
+ + + + G+ +G + T+ F
Sbjct: 141 GSGFEPQHASDKVVILGETVRRELFGADTGIGETVRIGRTNFTVLGTLQPKGMSGFGRDQ 200
Query: 204 NGMVYMSLQEAQLYFN-----LENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVV 254
+ +V + L A+ AV I + V PD + + +L +
Sbjct: 201 DDVVMVPLDTARRRLMGAMGLPPGAVMDISLTVAHPDDLAYVQGEVESLLRQRHRI 256
>gi|160898724|ref|YP_001564306.1| ABC transporter-like protein [Delftia acidovorans SPH-1]
gi|160364308|gb|ABX35921.1| ABC transporter related [Delftia acidovorans SPH-1]
Length = 666
Score = 44.0 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 26/238 (10%), Positives = 77/238 (32%), Gaps = 7/238 (2%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AWR + NR + ++ +G++IGV ++IV++++ G R +++++ + ++
Sbjct: 281 AWRGMRMNRVR------TSLTLLGIVIGVASVIVMLAIGEGARRKVVEQMGTMGTAILYM 334
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
P + + V ++ + + G + I S
Sbjct: 335 GSKPPATGGPAGQMTEEDLAAVRELPEIRRVMPVIGDPITVRYGKADKQIYVFAASEEMP 394
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTV 191
+ + + + + + +P G +G +
Sbjct: 395 LVHHWKLAQGRYYTEAEDRDLAPLVVLGHKAHQHFFPDTPNPLGRQLIIGTSAFEVIGVM 454
Query: 192 LGMFRMRFPDYDNGMVYMSLQEAQ-LYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ MV++ + + + + + + D + + E + ++L
Sbjct: 455 SERGADSGAQNYDDMVFIPYRSGRARVYQSQTQPDYVVIEAMSSDVVHEAEEAMRKLL 512
>gi|77917982|ref|YP_355797.1| ABC transporter permease [Pelobacter carbinolicus DSM 2380]
gi|77544065|gb|ABA87627.1| ABC-type transport system, permease component [Pelobacter
carbinolicus DSM 2380]
Length = 405
Score = 44.0 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 39/252 (15%), Positives = 75/252 (29%), Gaps = 12/252 (4%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDM------IKRVLGI 64
VA R L NR S ++ +G++IGV ++I ++++ G + D+ + L I
Sbjct: 9 VALRSLTRNRMR------SLLTMLGIIIGVGSVIALVALGEGSQADIAAEIDSMGTNLII 62
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ L+ + V+ + LS ++
Sbjct: 63 VVPESADSHGVRGAAGSSTSLSLEDADAIRAEALAVANVSAEIRLSEQVVAGNSNWNTSV 122
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
R Y V F + V LA + +P G +
Sbjct: 123 QGVSQTFPLIRNYAVVRGSFFSLRDVKAKAKLAVLGQTVVDKLFAGQNPVGQRIRIRNVP 182
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + D + ++ + A + V GI V P +E +
Sbjct: 183 FKVIGVLGEKGQNGMGDDQDDVILVPAPTALYRLSDGKTVRGILVSASTPAEVEAAKAQV 242
Query: 245 VRILGNGVVVID 256
+L + D
Sbjct: 243 RAVLRKTHGLRD 254
>gi|238026852|ref|YP_002911083.1| ABC transporter-like protein [Burkholderia glumae BGR1]
gi|237876046|gb|ACR28379.1| ABC transporter related protein [Burkholderia glumae BGR1]
Length = 664
Score = 44.0 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 29/266 (10%), Positives = 77/266 (28%), Gaps = 9/266 (3%)
Query: 4 FSRF--EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
F RF +A R + +NR +F ++ +G++ G+ ++ +++ G R ++ +
Sbjct: 269 FGRFVEAFRLAMRSVANNRLRSF------LTMLGIIAGIASVACMVARGEGSRRTIMSHI 322
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ D + + + DV + + ++S G+ +
Sbjct: 323 RQFGTDTISIFPGRMAGDLRANSIHTLSLADVRALQAQSYIDSVTPEVTSIGTIRVGNKD 382
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
++ + R +G + + + + + + +
Sbjct: 383 VSATVHGTGADYFRVHGIHMIKGRQFDQSQVESNAPVVVVDEKTQQTLFSTDSPIGKVVL 442
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+G + +YM + + V + D
Sbjct: 443 VGNLPCHVIGVAGSNAMSFAPGMLGLYMPYSSVMSRMTGSYNLQSVTVRLADGVPSSAAL 502
Query: 242 ENIVRILGNGVVVIDWQQRYQ-IFFS 266
I ++L ID+ F
Sbjct: 503 AGITKVLAARHGAIDFTTFNSDALFQ 528
>gi|90021404|ref|YP_527231.1| hypothetical protein Sde_1759 [Saccharophagus degradans 2-40]
gi|89951004|gb|ABD81019.1| protein of unknown function DUF214 [Saccharophagus degradans 2-40]
Length = 396
Score = 44.0 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 29/229 (12%), Positives = 68/229 (29%), Gaps = 8/229 (3%)
Query: 28 ASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRL 87
S + + V I V L+ +++ NGF++ + N +
Sbjct: 25 MSLATLLAVAIVVAVLLAFLAMGNGFKKTLESTGAEDIV-------IMMREGASAELNSV 77
Query: 88 DFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRG 147
+ G G ++ N R + + D
Sbjct: 78 LMRDQANLIEEAPGVLNDEQGAIVSGETYVIVDGKKRSSGTDANIPLRGVSSRAVDIRDN 137
Query: 148 KGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMV 207
++ G+ + + G + + + + V+G+F + +
Sbjct: 138 FSIVSGRMFEPGKNEIVVGSSILSEFAGFELGSEVKLGNAKWKVVGIFDTGGSVFS-SEL 196
Query: 208 YMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
+ ++ Q FN ++V + ++ P+AIE+ I + V
Sbjct: 197 WTDIRVVQSQFNRGSSVQIVRAKLESPEAIEQVKAYIAADARLNLDVQS 245
>gi|89896401|ref|YP_519888.1| hypothetical protein DSY3655 [Desulfitobacterium hafniense Y51]
gi|89335849|dbj|BAE85444.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 406
Score = 44.0 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 31/50 (62%), Gaps = 7/50 (14%)
Query: 4 FSRFEV-IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNG 52
+ E+ V+ R L++N+ S ++ +G++IGV A+I+++++ NG
Sbjct: 1 MNFLELMKVSLRALYANKLR------SALTMLGIIIGVFAVIIMVAIANG 44
>gi|219667768|ref|YP_002458203.1| hypothetical protein Dhaf_1721 [Desulfitobacterium hafniense
DCB-2]
gi|219538028|gb|ACL19767.1| protein of unknown function DUF214 [Desulfitobacterium hafniense
DCB-2]
Length = 406
Score = 44.0 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 31/50 (62%), Gaps = 7/50 (14%)
Query: 4 FSRFEV-IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNG 52
+ E+ V+ R L++N+ S ++ +G++IGV A+I+++++ NG
Sbjct: 1 MNFLELMKVSLRALYANKLR------SALTMLGIIIGVFAVIIMVAIANG 44
>gi|312865367|ref|ZP_07725595.1| macrolide export ATP-binding/permease protein MacB [Streptococcus
downei F0415]
gi|311099478|gb|EFQ57694.1| macrolide export ATP-binding/permease protein MacB [Streptococcus
downei F0415]
Length = 414
Score = 44.0 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 30/70 (42%), Gaps = 8/70 (11%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ A + ++ +F ++ +GV+IGV ++ V+++ NGF+ M +
Sbjct: 1 MMQN--WKFALGSIMGHKMRSF------LTMLGVIIGVASVSFVLALGNGFKVKMADTIS 52
Query: 63 GINGHVVIQQ 72
V +
Sbjct: 53 KAQHDVQVYY 62
>gi|73668226|ref|YP_304241.1| ABC transporter permease [Methanosarcina barkeri str. Fusaro]
gi|72395388|gb|AAZ69661.1| ABC transporter, permease protein [Methanosarcina barkeri str.
Fusaro]
Length = 404
Score = 44.0 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 24/226 (10%), Positives = 63/226 (27%), Gaps = 1/226 (0%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ A++V S+ F + + + + +I P + + N +
Sbjct: 22 SALTTLGIVIGIAAVVVNASLGASFNQFFTDEISSVGSNFIIAASEQPNLFFDNEYNLMK 81
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
P + V P S ++ LS + + + + +
Sbjct: 82 NTPGISGVSPRKSMSGDLTYLSETKNVNIAGVNKDFQEIQGLQMEEGTFLTDKDSAAAVL 141
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
G I + + + V+
Sbjct: 142 GYDIANEEFSRNISHRSTVEIAFRQENGTVVKKSFKVKGILKNSKPTVVSEDSDYDLTVF 201
Query: 209 MSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVV 254
+ + ++ + + P+ I +++ L V
Sbjct: 202 IPVSTMNEMIGEKDYGAFLA-MADSPEKIRDISDDVDSRLARNFGV 246
>gi|320334783|ref|YP_004171494.1| hypothetical protein Deima_2189 [Deinococcus maricopensis DSM
21211]
gi|319756072|gb|ADV67829.1| protein of unknown function DUF214 [Deinococcus maricopensis DSM
21211]
Length = 384
Score = 44.0 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 27/247 (10%), Positives = 70/247 (28%), Gaps = 14/247 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ A R L + ++ +G+M+ V ++++ +S+ G R+ +
Sbjct: 1 MKRSDLWGFAVRGLTRRPVR------TLLTALGIMVAVASMVIFLSLGEGLRKVFTSELG 54
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
GI + + + + + VRG
Sbjct: 55 GIGPDLQVSLNGLNQGLA------VQPNLPLSTAADVERLSGEFGFQQVTPVVMSVRGGL 108
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S++ G + G+ L +
Sbjct: 109 DPSQSFVLYGLPAAQGIQAVFPKAQVAS--GRALRAGDTGVAVVGAKAAENANLKVGSTL 166
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ +S + + +++ L+ Q E+ +S + V +++P + T +
Sbjct: 167 RLNRRSAVRVEGVLGTSGGLTDSFIFLPLETLQRAIGAEDRLSLVAVKLREPTRAKATAQ 226
Query: 243 NIVRILG 249
+ L
Sbjct: 227 ALAERLN 233
>gi|70731438|ref|YP_261179.1| macrolide efflux ABC transporter ATP-binding/permease [Pseudomonas
fluorescens Pf-5]
gi|122064303|sp|Q4K9A4|MACB2_PSEF5 RecName: Full=Macrolide export ATP-binding/permease protein MacB 2
gi|68345737|gb|AAY93343.1| macrolide efflux ABC transporter, ATP-binding/permease protein
[Pseudomonas fluorescens Pf-5]
Length = 657
Score = 44.0 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 25/237 (10%), Positives = 73/237 (30%), Gaps = 6/237 (2%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +++
Sbjct: 273 AWRVMWINR------FRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMGAFGSNIIYL 326
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
Y P LD + + + A + G
Sbjct: 327 SGYSPNPRTPEGIVTLDDVAALANLPQVKRIMAVNGAKAGVRFGNADYMSYVGGNDTNFP 386
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTV 191
+ + F + ++ +P G + +
Sbjct: 387 EIFNWPVAQGSYFSEADESSAAAVAVIGHKVREKLLKDVANPIGQYILIENVPFQVVGVL 446
Query: 192 LGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ + + A + ++ + + D +++T + I ++
Sbjct: 447 SEKGASSGDSDSDDRIAVPYSAASIRLFGDHNPQYVAIAAADASRVKQTEQEIDELM 503
>gi|257095775|ref|YP_003169416.1| hypothetical protein CAP2UW1_4246 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257048299|gb|ACV37487.1| protein of unknown function DUF214 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 401
Score = 44.0 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 11/68 (16%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Query: 3 IFSRF-EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+ + +A R + ++R +F+++ +G+ +G+ A+I++ S+ G ++
Sbjct: 1 MIRPRDSLQLALRAITAHRLRSFLTL------LGIAVGIAAVILLTSIGEGIHRFVLAEF 54
Query: 62 LGINGHVV 69
+V+
Sbjct: 55 TQFGTNVI 62
>gi|225872539|ref|YP_002753994.1| ABC transporter, permease protein [Acidobacterium capsulatum ATCC
51196]
gi|225793103|gb|ACO33193.1| ABC transporter, permease protein [Acidobacterium capsulatum ATCC
51196]
Length = 370
Score = 44.0 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 35/248 (14%), Positives = 73/248 (29%), Gaps = 24/248 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ L +R + IS G+ V A++ V++++ G + + V
Sbjct: 4 FKLIITNLSRHRVR------TAISIAGIAFSVAAMLTVVTILQGAVAMFSGLLSANSQIV 57
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
V ++ L + + I V V + +
Sbjct: 58 VFEKNVSDLFFSNVPDSAVHQIQSWS----IVDHANPVLFGVVASTDHPIITCFGVTADD 113
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ S + F ++ D ++ G
Sbjct: 114 ARLRDSTWVAGRPQSFASVPNGVLLGQ-------RASDFLHARLGSQVAIGHGTFTVIGI 166
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ F ++G V+M L+ AQ +F+ +NA S I V + + + + I +
Sbjct: 167 IRLKNGF-------EDGGVFMPLRMAQQFFHKQNASSVITVKLHNRKDAAQFKQMIAQHF 219
Query: 249 GNGVVVID 256
V + D
Sbjct: 220 PTLVALKD 227
>gi|193214304|ref|YP_001995503.1| hypothetical protein Ctha_0585 [Chloroherpeton thalassium ATCC
35110]
gi|193087781|gb|ACF13056.1| protein of unknown function DUF214 [Chloroherpeton thalassium ATCC
35110]
Length = 416
Score = 44.0 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 29/253 (11%), Positives = 74/253 (29%), Gaps = 19/253 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++A+ + +++ S ++ +GV+IG++A+ ++ + + G + K + I
Sbjct: 11 SFVIAFAQIRAHKMR------SMLTALGVVIGILAVTLMGTAIGGIDKGFDKSLSIIGFD 64
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
V+ QK+ + R + A + + +
Sbjct: 65 VLYVQKWPWSSVDDWWNYRNRPRLETDYADKMNRMIATNPNSELVTVVPQMASSKSVYYE 124
Query: 128 YLQNSFSRFYGNVSND------------FDRGKGVIIGKDLARNLGISIGDKINILSPYG 175
G F G+ + SP
Sbjct: 125 GNAVEDIFILGTTDRYPETSTVELSEGRFFNTIESRTGRQVCVLGYDVADALFPNASPIN 184
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD 235
+G + + + V + L+ + F ++ + V +KD
Sbjct: 185 QKVRIGNQNFLVIGVYVKQGKFLGLFSLDTQVVIPLESFKKVFGCGRRIT-LRVKIKDEA 243
Query: 236 AIEKTHENIVRIL 248
+E+ + + I+
Sbjct: 244 RLEEAKDEVTGIM 256
>gi|146304292|ref|YP_001191608.1| hypothetical protein Msed_1528 [Metallosphaera sedula DSM 5348]
gi|145702542|gb|ABP95684.1| protein of unknown function DUF214 [Metallosphaera sedula DSM 5348]
Length = 409
Score = 44.0 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 36/248 (14%), Positives = 76/248 (30%), Gaps = 9/248 (3%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
+++ L S + + ++ +G++IG ++ + + GF + ++ I
Sbjct: 10 SFKALTSKKLR------TSLTILGILIGPAIVVGLTGLTLGFSSVLTHQLFSSLSPTDIF 63
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
+ + IP V V+PF + SG + IS S S +
Sbjct: 64 VTPGTSTITPYTIQEISHIPGVKAVVPFYLISGTIETP-SGPMATEILSISTSQASEVFP 122
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTV 191
+ G + + V+ ++ TP G ++ T
Sbjct: 123 GLTLQQGQYPSPYSSYGAVVGYYIAHPQYPGQPTYQVGQTITVVMNTPNGKITKTFLVTG 182
Query: 192 LGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNG 251
+ + + Y+ + SG+ V + +I LG
Sbjct: 183 SFNEFSSAFADIDKALVVQNIVGSQYYG--DQYSGLIVEASSVSQVNNVVNSIHNELGRS 240
Query: 252 VVVIDWQQ 259
V V +Q
Sbjct: 241 VSVTSVEQ 248
>gi|238757592|ref|ZP_04618776.1| Macrolide export ATP-binding/permease protein macB [Yersinia
aldovae ATCC 35236]
gi|238704097|gb|EEP96630.1| Macrolide export ATP-binding/permease protein macB [Yersinia
aldovae ATCC 35236]
Length = 523
Score = 44.0 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 24/243 (9%), Positives = 80/243 (32%), Gaps = 8/243 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+++AWR + +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 132 ALLMAWRAMSANKMR------TALTMLGIIIGIASVVSILVVGDAAKQLVLADIRAIGTN 185
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+ + A ++S S
Sbjct: 186 TIDIYPGKDFGDDDPSTRQALVYDDMAALQAQPYVSAVSPSITSTIRLRRGNIDVAGSVS 245
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK--INILSPYGDVTPMGMGIR 185
+ + + YG + + + + + + +
Sbjct: 246 GVSEQYFKVYGMKLEQGTAITREQVERQSQTVVVDRNTQRRLFPNMQDVVGQVILIGNMP 305
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ V+ + F V++ + I V +K+ + ++ + ++
Sbjct: 306 ATVVGVVEEKQSMFGSSKALRVWVPYSTMASRLMGRSYFDSITVRIKEGYSSKEAEQQLI 365
Query: 246 RIL 248
R+L
Sbjct: 366 RLL 368
>gi|187777679|ref|ZP_02994152.1| hypothetical protein CLOSPO_01271 [Clostridium sporogenes ATCC
15579]
gi|187774607|gb|EDU38409.1| hypothetical protein CLOSPO_01271 [Clostridium sporogenes ATCC
15579]
Length = 822
Score = 44.0 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 30/260 (11%), Positives = 73/260 (28%), Gaps = 21/260 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M +F +A+ + N+ + + + +M+ I+ S + + + K
Sbjct: 1 MKLF----FKIAFNSIRKNKIRYILLTCTLVLSTIIMLSTS--IIKDSAIKIREDQLRKT 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
L + + P + + I N + I + ++P + G A + + V
Sbjct: 55 TLNSQLVITTADEKNPFFNPKDIINSIKNIDGISHIVPRIGGMAKDYKTLKDVNIIGVDL 114
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
++ + N+ + L I +
Sbjct: 115 NKQKAAFPIELIDKYKVKDKENEIIINEKYAKENYLKVGSKIKLVIGNKNKEFIISGISK 174
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
D +S+ AQ + ++ I + +K+ D I
Sbjct: 175 ---------------NTGVFDPSMNTAMISIDNAQYLLDQKDNAYSIGITIKNLDDINNM 219
Query: 241 HENIVRILGNGVVVIDWQQR 260
E I + + ++
Sbjct: 220 IEKIKPKVSSKFIIQQRYDM 239
>gi|295109457|emb|CBL23410.1| Predicted permease. [Ruminococcus obeum A2-162]
Length = 1289
Score = 44.0 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 39/251 (15%), Positives = 71/251 (28%), Gaps = 25/251 (9%)
Query: 1 MSIFSR---FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDM 57
M F + F + R LF +K F ++ G+ G MAL++ V G R+ +
Sbjct: 903 MPFFWKHLNFTWKSSLRNLFRYKKRLF------MTIFGIA-GSMALML---VGYGIRDSI 952
Query: 58 IKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVL 117
V + D A + + + + L + L
Sbjct: 953 SDIVNLQYTDLQHYDAMIISDDDATDAEKKELQSCLEQ----------NEDLDHYTNIQL 1002
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
+ + + S L D + K +
Sbjct: 1003 TKLAAPNGKSDLSVYVYVPENLEKFKKDVTLQNRVTKQSYELPEEGAAVSEKTATLLDLK 1062
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKD--PD 235
+ ++ + +Y YMS Q + F + S I VKD D
Sbjct: 1063 VGDELTLKKDDKEYKVKISVITENYAGHYAYMSPQVYEETFGEKPDYSDIVFTVKDKYKD 1122
Query: 236 AIEKTHENIVR 246
+E+ + I+
Sbjct: 1123 QLEEIGQKIME 1133
>gi|150026226|ref|YP_001297052.1| ABC transporter permease [Flavobacterium psychrophilum JIP02/86]
gi|149772767|emb|CAL44251.1| Probable ABC-type transport system, permease component
[Flavobacterium psychrophilum JIP02/86]
Length = 417
Score = 44.0 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 45/280 (16%), Positives = 99/280 (35%), Gaps = 18/280 (6%)
Query: 5 SRFEVIVAWRYLFSN-RKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
E +A R + K++ + I+ + IG++ +IV ++ G ++ + ++V
Sbjct: 1 MNLEYFIAKRLTSAKDHKSSISAPIIKIAITAIAIGMIMMIVSIATGTGLQQKIRQKVAA 60
Query: 64 INGHVVIQQKYYPLVD-------YQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
NGH++I I+ + V+ +A + G+
Sbjct: 61 FNGHILISNFDDNQSQVSLSPISTNQDFYPKFTSVQGIQHIQAVASKAGIIRTQKAFEGI 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
+ +G+ + + + ++I + LA L + +GDK N
Sbjct: 121 VFKGVGKEYRWENLTEYLVKGRIPNLKSELNPEILISEYLANRLQLKLGDKCNTFFMKDS 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF-NLENAVSGIEVFVKDPD 235
M + ++++G++ F ++D + ++ Q V EVF+ D D
Sbjct: 181 GNHM---PNLRVFSIVGIYNSGFQEFDATYIIGDIRHIQQINKWQPTQVGAFEVFINDFD 237
Query: 236 AIEKTHENIVRILGNG------VVVIDWQQRYQIFFSCYE 269
IE+ + N + Q+Y F +
Sbjct: 238 KIEQKGVEVYNNSQNKSDPSKTLDTQTIVQKYYNIFEWLK 277
>gi|24379318|ref|NP_721273.1| putative ABC transporter, permease component [Streptococcus mutans
UA159]
gi|290580678|ref|YP_003485070.1| putative ABC transporter permease [Streptococcus mutans NN2025]
gi|24377240|gb|AAN58579.1|AE014927_8 putative ABC transporter, permease component [Streptococcus mutans
UA159]
gi|254997577|dbj|BAH88178.1| putative ABC transporter permease component [Streptococcus mutans
NN2025]
Length = 414
Score = 44.0 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 29/259 (11%), Positives = 72/259 (27%), Gaps = 26/259 (10%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A + S++ +F ++ +G++IGV +++++M++ G ++ + +V ++
Sbjct: 4 WKFALSSILSHKMRSF------LTMLGIIIGVASVVMIMALGQGLKKGISDQVNKEQKNL 57
Query: 69 VIQQKYYPLVDYQFIANRLDFIP-------------------DVIKVLPFVSGQAFVSGL 109
+ K + + D V + + + +
Sbjct: 58 NVYYKTKAEQEAEKNPYYQVDTSDSSAKAPDIQEAWVEKIAQDTKGVSGYYITNSKTATV 117
Query: 110 SSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN 169
S I+ + +YL + S + L NL +
Sbjct: 118 SYRKKSSKNVNITGINRTYLSIKKFKIIAGRSFTSNDYDKFGRIIMLDANLAKKLFGDNE 177
Query: 170 ILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV 229
+ Y + G M+ + F ++ I
Sbjct: 178 TALNKVITLSNKSYLVVGVYEDPNAGTATYGTTSGGNAIMTNTQVASEFGVKEN-DQIYF 236
Query: 230 FVKDPDAIEKTHENIVRIL 248
+ D K + L
Sbjct: 237 HINDVSQANKIGKETGAAL 255
>gi|315187524|gb|EFU21280.1| protein of unknown function DUF214 [Spirochaeta thermophila DSM
6578]
Length = 417
Score = 44.0 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 32/281 (11%), Positives = 77/281 (27%), Gaps = 37/281 (13%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+AWR +F NR+ S +S + + I M+L+++ +++ ++D+ + +
Sbjct: 6 IAWRNIFRNRRR------SLLSVLALAIAAMSLVLLFGLIDWMKDDLRTNLFRFYTGQIR 59
Query: 71 QQKYYPLVDYQFIANR------------LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
+ ++ IP V + A V GV
Sbjct: 60 IRDREFDTYEHLSPLHLKVEHALDLVEKIEQIPGVRAAAARIGFPAMVLEEEGTFLGVYG 119
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
R + + N +++ ++ + +
Sbjct: 120 RAMDMEQERKVANLDEYLLTGEF-------PKAGSREILLTPSLAEELGKQVGDTLTLMA 172
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-------NAVSGIEVFV 231
+ + + ++ L Q + +A S + V +
Sbjct: 173 RTATYGTNAMTFTITGLVRFPFSSLDRAFFIPLDTGQRLLRMRSLNGSTFDAASEVVVLL 232
Query: 232 ----KDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
K+ D + + V WQ+ +S
Sbjct: 233 EEGVKERDVLPHVQALLATGSYGDVEAKPWQEL-PTLYSVI 272
>gi|299530430|ref|ZP_07043851.1| macrolide-specific ABC-type effluxcarrier [Comamonas testosteroni
S44]
gi|298721570|gb|EFI62506.1| macrolide-specific ABC-type effluxcarrier [Comamonas testosteroni
S44]
Length = 652
Score = 44.0 bits (101), Expect = 0.023, Method: Composition-based stats.
Identities = 28/238 (11%), Positives = 76/238 (31%), Gaps = 7/238 (2%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AWR + NR + ++ +G++IGV ++IV++++ G R +++++ + ++
Sbjct: 267 AWRGMRMNRVR------TSLTLLGIVIGVASVIVMLAIGEGARRKVVEQMGTMGTAILYM 320
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
P D + + ++ + + G + I S
Sbjct: 321 GSKPPASGGPAGQITEDDLAAMRELPAIRRVMPVIGDPVTVRYGKADKQIYVFAASEEMP 380
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTV 191
+ F + + + + + G +G +
Sbjct: 381 LVHHWRVAQGRYFTDVEDRDLAPLVVIGHKAHQHFFPEVANSLGLQLIIGSSAFEVIGVM 440
Query: 192 LGMFRMRFPDYDNGMVYMSLQEAQ-LYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ MV++ Q + + + + V + + + E+I +L
Sbjct: 441 SERGADSGAQDYDDMVFIPYQSGRARVYQAQTQPDYVVVEASSSEQVHEAEESIHSLL 498
>gi|323140566|ref|ZP_08075491.1| efflux ABC transporter, permease protein [Phascolarctobacterium sp.
YIT 12067]
gi|322414919|gb|EFY05713.1| efflux ABC transporter, permease protein [Phascolarctobacterium sp.
YIT 12067]
Length = 404
Score = 44.0 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 36/261 (13%), Positives = 91/261 (34%), Gaps = 26/261 (9%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A + + SN+ F+++ +G++IGV A+I ++S+ G +E++ + + +
Sbjct: 5 SIKMALQGMVSNKLRTFLTL------LGIIIGVGAVIAMVSLGFGLKENVKSNISKLGSN 58
Query: 68 VVIQQKYYPLV-------------DYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
++I Y + + + + V+ + + +
Sbjct: 59 LLIITSGGRTSTGARLAAGEGVKLTYDDMQAIGKQVDGIANITASVNRSYQMVAGNQNWT 118
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ ++ N + RG+ +IGK +A +L +P
Sbjct: 119 SRVEGTTPSNFTISSLEVDDGRILNDRDLISRGRVAVIGKTVADSL-------FPEGNPV 171
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G + + + + + +VY+ L AQ V I V ++
Sbjct: 172 GKIMRINKAPFQVVGVLKSKGQGSMGMDQDDVVYVPLTTAQNRMMGITNVQRITVQAENE 231
Query: 235 DAIEKTHENIVRILGNGVVVI 255
+ I ++ ++L +
Sbjct: 232 NIINDVQADVEQVLRTRHKIK 252
>gi|296100750|ref|YP_003610896.1| Macrolide-specific ABC-type efflux carrier [Enterobacter cloacae
subsp. cloacae ATCC 13047]
gi|295055209|gb|ADF59947.1| Macrolide-specific ABC-type efflux carrier [Enterobacter cloacae
subsp. cloacae ATCC 13047]
Length = 643
Score = 44.0 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 8/60 (13%)
Query: 2 SIFSRF--EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
S+ SRF V +AWR L +R AF +S +G++IG+ +++ M+V G R ++
Sbjct: 245 SLVSRFRESVRMAWRALLGHRMRAF------LSMLGIIIGIASVVSSMAVGEGARRAIVD 298
>gi|23097618|ref|NP_691084.1| hypothetical protein OB0163 [Oceanobacillus iheyensis HTE831]
gi|22775841|dbj|BAC12119.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 397
Score = 44.0 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 29/253 (11%), Positives = 80/253 (31%), Gaps = 14/253 (5%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
MS F +A L +++ S ++ +G++IGV ++I V+++ + +
Sbjct: 1 MSFFENI--KMALSSLRAHKMR------SILTMVGIIIGVGSVIAVIAIGQAGEAILKSQ 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
++G + + + Q + L P + + ++ V + + S
Sbjct: 53 IIGSG-NTIDLYYMPSDEELQADPDALTMDPFTEEDIRAIASIPEVKNVIATSSEYGNIR 111
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
++ Y V+ ++ D ++ + P+
Sbjct: 112 YQEETVEASITGINQAYLEVNGLKLGQGRNLLSADFLAGKRTTVISPSIKDELFDGENPI 171
Query: 181 GMGIRSK----SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
G I + + +Y+ + F N +S + + ++ +
Sbjct: 172 GRVIYIQSQPVEIVGILEEPSGLLSLGMNEIYLPWNTWRTVF-ASNDISQVTLQIEKAED 230
Query: 237 IEKTHENIVRILG 249
++ +L
Sbjct: 231 LQDVGSQAADMLN 243
>gi|326204078|ref|ZP_08193939.1| protein of unknown function DUF214 [Clostridium papyrosolvens DSM
2782]
gi|325985845|gb|EGD46680.1| protein of unknown function DUF214 [Clostridium papyrosolvens DSM
2782]
Length = 405
Score = 44.0 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 36/255 (14%), Positives = 82/255 (32%), Gaps = 16/255 (6%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV--LGIN 65
A L +N+ S ++ IG+++GV ++I ++++ N + + + +G N
Sbjct: 6 SFKQALSSLRANKLR------SVLTMIGIIMGVFSVITIVAIGNATQSYVDNQFAKIGAN 59
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+V + + + ++ L I +K + V G + ++
Sbjct: 60 ILIVSYKTDSLSTNDRLASDDLKAISRNVKKIKNVGTNVNRPGTIRLDNKTRNASLNGVS 119
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN-ILSPYGDVTPMGMGI 184
Y + + + K N I G +
Sbjct: 120 SQYKDIVPVDMAQGRMINEIDNSTRSNVVVIDEEFAKANFGKQNPIGQKLKVTLGSGSTL 179
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVY-----MSLQEAQLYFNLENAVSGIEVFV--KDPDAI 237
R + V + F + + + Q Y + ++ I + V KD +
Sbjct: 180 RLRVIGVTKIEETPFGGMIDNESRPVSLTVPMTTLQSYSPDSDRLNYIYISVDEKDKTTL 239
Query: 238 EKTHENIVRILGNGV 252
+K + I++ L N
Sbjct: 240 KKIADEIIKTLENKH 254
>gi|149276209|ref|ZP_01882353.1| putative FtsX-related transmembrane transport protein [Pedobacter
sp. BAL39]
gi|149232729|gb|EDM38104.1| putative FtsX-related transmembrane transport protein [Pedobacter
sp. BAL39]
Length = 809
Score = 44.0 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 30/246 (12%), Positives = 70/246 (28%), Gaps = 12/246 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + +A R L+ ++ A ++ G+ +G I+++ N +
Sbjct: 27 MFQ-LNLKIALRNLWKSKGYAALN------IFGLAVGFAGFILILLYAN---HEYSYDTW 76
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ V + + A+ + +K +L G
Sbjct: 77 NPDADQVYRIGVKAGAGQEEYASNPGELAPALKNAAPEIESFARYYTWDLHQRLLTYGGK 136
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
++ S ++ F G + + S ++ + M
Sbjct: 137 EFYVDHIMGVDSSWFAAFPYKFLYGDPKRMLISADDIVLSSNIAELYFGKQNPVGKSLVM 196
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + P++ + ++ + +N N S I VK + E
Sbjct: 197 NGKKTYIVSGVYEQPETPEHLDHDGFVKMSSQGDGWNNGNFYSYI--KVKKGTDLALLSE 254
Query: 243 NIVRIL 248
I R L
Sbjct: 255 KINRAL 260
>gi|288560958|ref|YP_003424444.1| ABC transporter permease protein [Methanobrevibacter ruminantium
M1]
gi|288543668|gb|ADC47552.1| ABC transporter permease protein [Methanobrevibacter ruminantium
M1]
Length = 378
Score = 44.0 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 28/250 (11%), Positives = 69/250 (27%), Gaps = 18/250 (7%)
Query: 9 VIVAW--RYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
++ + F N+ +F +S +G+ IG+ ++ + + G + + +
Sbjct: 2 RFISLIIKNPFRNKTRSF------LSIVGIAIGIATIVALGLITTGMEQSVQTTMNEGAA 55
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
+ + + I + + + +++S+
Sbjct: 56 EITVTNIT---------SIGAGTIDSSLVDELKNITNVSRTAGILSATDQNFVDMASSND 106
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
S +R YG D D I +
Sbjct: 107 MSSMESSTRLYGINRADLDLEGIKDINGSFFEEGTKQAIIGKQYAQMNNMSIGDNISALG 166
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ + ++G+F + VY+SL+ E V+ + V + + I
Sbjct: 167 EEFEIVGVFETGGVL-ADSGVYVSLETLDEVTGAEGKVNQVIVKTDEGVNDTVVADAIED 225
Query: 247 ILGNGVVVID 256
N +
Sbjct: 226 KYENLTTITS 235
>gi|170722698|ref|YP_001750386.1| ABC transporter-like protein [Pseudomonas putida W619]
gi|169760701|gb|ACA74017.1| ABC transporter related [Pseudomonas putida W619]
Length = 654
Score = 44.0 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +
Sbjct: 266 ALQAAWRVMWINR------FRTALTLLGIVIGVASVVVMLAVGEGSKRQVMAQMAAFGSN 319
Query: 68 VVI 70
++
Sbjct: 320 ILY 322
>gi|108758874|ref|YP_630648.1| hypothetical protein MXAN_2428 [Myxococcus xanthus DK 1622]
gi|108462754|gb|ABF87939.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
Length = 433
Score = 44.0 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 29/252 (11%), Positives = 78/252 (30%), Gaps = 10/252 (3%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
++A+R L ++R+ + + S L+++M + G +E M++ ++
Sbjct: 5 FLIAFRNLGTHRRRTLLLGGAIASV------TALLVILMGLSTGMKESMLRSATTLSTGH 58
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
V +Y + Q + + ++ V F G V+ S
Sbjct: 59 VNVAGFYKVTAGQAAPVVTGYPAILEQIRKDVPELDFAVQRGRGWLKVVSETSSIQVGVG 118
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ S G + + L K+N+ + +
Sbjct: 119 GIDIQSEPGLRQVLQIRAGSLDGLAESGTVLLFEKQAKKLNVQVGESVTLAAQTLRGASN 178
Query: 189 YTV--LGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHENIV 245
+ + +++ + + + + + +++KD + +
Sbjct: 179 TVDARVVAIAADMGMLSDFGIFVPSDTLRSLYQFKSDTAGALLLYLKDIQHVPAVQARLR 238
Query: 246 RILGN-GVVVID 256
+ L + G V+D
Sbjct: 239 QTLTDAGHTVMD 250
>gi|253989284|ref|YP_003040640.1| ABC transporter [Photorhabdus asymbiotica subsp. asymbiotica ATCC
43949]
gi|253780734|emb|CAQ83896.1| putative ABC transporter [Photorhabdus asymbiotica]
Length = 409
Score = 44.0 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 27/265 (10%), Positives = 80/265 (30%), Gaps = 13/265 (4%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
F + +A R L +++ F+++ + + IGV +++++ ++ ++ ++K V +
Sbjct: 19 FNLKMAARSLVAHKTRVFLTL------LCIAIGVASIVIMQAIGMATKDHIVKAVSSMGS 72
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
+++ + N D+ + ++ G+ V +G +N+
Sbjct: 73 NIISVKYKGQESGAFDSHNNYLTQKDITSLSGNPHISYSTLFSTASGTIVSPQGTTNAQL 132
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK--INILSPYGDVTPMGMGI 184
+ V + + + + + I
Sbjct: 133 IGANADIAIIRNLVIERGRFYTPKEDETLANVVVLGASLAERLFSHKESAFEQNIKINDI 192
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ +L + V++ + SGI + KD +E +
Sbjct: 193 SMRVTGILAQKGEGMDVGVDDTVFIPRNSYLVRLFGNTPPSGIVLKAKDASHVESVKRAV 252
Query: 245 VRILG-----NGVVVIDWQQRYQIF 264
L + + + +
Sbjct: 253 EEQLSPFKRQQSYEIRNTTELLKTL 277
>gi|188587224|ref|YP_001918769.1| protein of unknown function DUF214 [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179351911|gb|ACB86181.1| protein of unknown function DUF214 [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 467
Score = 44.0 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+I+A + L+ + + ++ +GV+IG +++V++S+ G + M + +
Sbjct: 7 LILANKNLWRRKVR------TILTCMGVVIGTASIVVMISLGIGLQASMEESMARWGDLN 60
Query: 69 VIQQKYYPLVDYQFIA 84
+IQ D +
Sbjct: 61 IIQVNPGMHHDPENPE 76
>gi|56807831|ref|ZP_00365674.1| COG0577: ABC-type antimicrobial peptide transport system, permease
component [Streptococcus pyogenes M49 591]
gi|209559200|ref|YP_002285672.1| Permease, putative [Streptococcus pyogenes NZ131]
gi|209540401|gb|ACI60977.1| Permease, putative [Streptococcus pyogenes NZ131]
Length = 406
Score = 44.0 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 29/255 (11%), Positives = 66/255 (25%), Gaps = 20/255 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A ++ ++ S ++ +G++IGV A++++M + N + + +
Sbjct: 4 WKFALSSIWGHKMR------SILTMLGIIIGVAAVVIIMGLGNAMKNSVTSTFSSKQKDI 57
Query: 69 VIQQ-------------KYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSG 115
+ + + D+ + + + S +S
Sbjct: 58 QLYFQEKGEEEDLYAGLHTHENNHEVKPEWLEQIVKDIDGIDSYYFTNSATSTISYEKKK 117
Query: 116 VLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYG 175
V I Y + + L L + + N S
Sbjct: 118 VDNASIIGVSKDYFNIKNYDIVAGRTLTDNDYSNFSRIILLDTVLADDLFGEGNYKSALN 177
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD 235
V + D +G M+ + F + + I + V D
Sbjct: 178 KVVSLSDKDYLVIGVYKTDQTPVSFDGLSGGAVMANTQVASEFGTK-EIGSIYIHVNDIQ 236
Query: 236 AIEKTHENIVRILGN 250
+L N
Sbjct: 237 NSMNLGNQAADMLTN 251
>gi|319409383|emb|CBI83027.1| ATP-binding protein of ABC transporter [Bartonella schoenbuchensis
R1]
Length = 660
Score = 43.6 bits (100), Expect = 0.025, Method: Composition-based stats.
Identities = 28/243 (11%), Positives = 74/243 (30%), Gaps = 8/243 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + ++R F ++ +GV+IG+ ++I ++S+ NG ++ +++ + +
Sbjct: 269 AFTMALFAMNAHRMRTF------LTMLGVIIGIASVIAMVSLGNGTQKKILENFKSLGTN 322
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
++ D D + +S + +N+ +
Sbjct: 323 ILTILPGKSFSDPLADKITSLVEDDAQALSGLPYVDGVTPQISVSSTVYYGGIEANAVVA 382
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ F + +G + + + + + +
Sbjct: 383 GVGEQFFQTHGFSVVEGQLFDRQSVRDRAVDLVIEKEAIASLFPHSHESPIGKVVRVGKV 442
Query: 188 SYTVLGMFRMRFPDYDNG--MVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++G+ + VY+ Q F V I V + D + +
Sbjct: 443 PARIIGVVASNNEAGASNTLQVYLPYTAVQTRFLGTTIVRAITVKIADDVDSKLAEAEVR 502
Query: 246 RIL 248
R L
Sbjct: 503 RFL 505
>gi|260577109|ref|ZP_05845087.1| ABC transporter related protein [Rhodobacter sp. SW2]
gi|259020687|gb|EEW24005.1| ABC transporter related protein [Rhodobacter sp. SW2]
Length = 643
Score = 43.6 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 25/256 (9%), Positives = 70/256 (27%), Gaps = 7/256 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGF-REDMIKRVLGING 66
+A R + ++R F ++ +G++IG+ ++++V+++ G ++ +
Sbjct: 254 AFSMATRSMNAHRLRTF------LTMLGIIIGIASVVLVVALGAGSKQKVLEDISSIGTS 307
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
+ I+ L + S ++ +
Sbjct: 308 TISIRAGTGFGDRRAEAITTLVPADATALASQPYAVSVSPSVNTNAMLNYRSVSTAAQVQ 367
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
F +V+ G I +D + + + + +G
Sbjct: 368 GVGGGYFDLASYDVTEGQVFGDDAISRRDQVAVIDTDTATTLFTSGEAATGSVILLGRVP 427
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ V++ ++++ I V + D I
Sbjct: 428 VRVIGVVKNSGASFGPQTLKVFVPYTTVSSRITGKDSIDSISVKIDDAYGTSAAEALITD 487
Query: 247 ILGNGVVVIDWQQRYQ 262
++ V D+
Sbjct: 488 LMIQRHGVRDFFLTNS 503
>gi|313668970|ref|YP_004049254.1| Macrolide export ATP-binding/permease protein MacB [Neisseria
lactamica ST-640]
gi|313006432|emb|CBN87895.1| Macrolide export ATP-binding/permease protein MacB [Neisseria
lactamica 020-06]
Length = 644
Score = 43.6 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 31/231 (13%), Positives = 76/231 (32%), Gaps = 5/231 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG ++ +++ + + + + D + R
Sbjct: 269 SLLTMLGIIIGIASVVSVVALGNGSQKKILEDISSMGTNTISIFPGRGFGDRRSGKIRTL 328
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I D + + SSGG+ + + + G
Sbjct: 329 TIDDAKIIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFD 388
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ +D + + R + TV+G+ + + N V
Sbjct: 389 ENDVKEDAQVVVIDQNVKDKLFADSDPLGKTI--LFRKRPLTVIGVMKKDENAFGNSDVL 446
Query: 209 MSLQEAQLYFNL---ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
M + E+ + I V +KD + + + +L D
Sbjct: 447 MLWSPYTTVMHQITGESHTNSITVKIKDNANTQVAEKGLTELLKARHGTED 497
>gi|27380415|ref|NP_771944.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
110]
gi|27353579|dbj|BAC50569.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA
110]
Length = 407
Score = 43.6 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 37/70 (52%), Gaps = 8/70 (11%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ F +A L N +F ++ +G++IGV +++ V ++ +G + + ++
Sbjct: 1 MTMLQGF--QIALHALRLNPLRSF------LTMLGIVIGVASIVTVFAIGSGAQLRLQEQ 52
Query: 61 VLGINGHVVI 70
+ I +V++
Sbjct: 53 IRSIGANVLM 62
>gi|206890209|ref|YP_002249209.1| permease protein of ABC transporter [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206742147|gb|ACI21204.1| permease protein of ABC transporter [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 401
Score = 43.6 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 29/241 (12%), Positives = 82/241 (34%), Gaps = 9/241 (3%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
VA R + N S ++ +G++IGV ++I +++V NG E + +++ + ++++
Sbjct: 8 VALREIKRNLLR------SILTVLGIVIGVSSVITMVTVGNGATEQVKQQIASMGSNILM 61
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
Q D+ + + V+ +++ + + +
Sbjct: 62 ITPGKRFGPGQAGGTIQFKEIDMQAIKNEILSVENVTPVTNDSLIAVYGNQNWTTQVTGT 121
Query: 131 NSFSRFYGNVSNDF---DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
++ N + G + + G+ +G
Sbjct: 122 DNNYFKVSNRIIKEGRLFSDSEIRSGTSVCIIGETVKIKLFGGQNALGERIRIGKLSCEV 181
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ + + ++ + L+ Q + ++ I V +K + EK ++I +
Sbjct: 182 IGLLEAKGQSAMGTDQDDIIIIPLRTFQRRISGSQDIAMIMVSIKKDISTEKAQQDIREL 241
Query: 248 L 248
+
Sbjct: 242 M 242
>gi|145219525|ref|YP_001130234.1| hypothetical protein Cvib_0717 [Prosthecochloris vibrioformis DSM
265]
gi|145205689|gb|ABP36732.1| protein of unknown function DUF214 [Chlorobium phaeovibrioides DSM
265]
Length = 421
Score = 43.6 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 29/250 (11%), Positives = 70/250 (28%), Gaps = 20/250 (8%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A + +N+ +F ++ +GV+IG++A+ ++ + +NG K + +
Sbjct: 15 SLHIALFQIRANKIRSF------LTALGVIIGIVAITMMGTAINGIDRGFDKSLAMLGYD 68
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
V+ QK Q+ R + + + S
Sbjct: 69 VIYVQKSSWSTMGQWWRYRNRADLKTSYTEAINRTIEDNPNSNLLVAVPQMSTYQASVQY 128
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINI-------------LSPY 174
F S + + + S +
Sbjct: 129 RDLTIEQAFALGTSYRYPQTASGDLSSGRFFTPTESAAGTMVAVIGDDIATGLFGEREAV 188
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G++ M + + V M L + F + V+ + V ++D
Sbjct: 189 GNIIKMKNSRFRVIGVFRKQGKFLGLFSFDNQVIMPLGAFEKTFGKKGFVT-LRVKIRDQ 247
Query: 235 DAIEKTHENI 244
++ +
Sbjct: 248 KQVDDAKAEL 257
>gi|330810841|ref|YP_004355303.1| Macrolide ABC transporter, ATP-binding/permease components
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|327378949|gb|AEA70299.1| Macrolide ABC transporter, ATP-binding/permease components
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 656
Score = 43.6 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +++
Sbjct: 272 AWRVMWINR------FRTALTLLGIVIGVASVVVMLAVGEGSKRQVMAQMGAFGSNIIY 324
>gi|225175215|ref|ZP_03729211.1| protein of unknown function DUF214 [Dethiobacter alkaliphilus AHT
1]
gi|225169391|gb|EEG78189.1| protein of unknown function DUF214 [Dethiobacter alkaliphilus AHT
1]
Length = 399
Score = 43.6 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 35/265 (13%), Positives = 76/265 (28%), Gaps = 22/265 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M+IF +A L + +G+++GV ++ ++S++ R ++ R
Sbjct: 1 MNIFQ-----IAVNNLKRRKMKM------LFLMLGLVVGVATVVAMLSIVEAMRLELGDR 49
Query: 61 VLGINGHVVIQQKY---------YPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSS 111
+ + VI + + F L V +
Sbjct: 50 IDEFGANAVIMPRSEGVELDYGGTMVSGVTFDMETLTEDDIPKIYESSVVDYVNIVSPKL 109
Query: 112 GGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL 171
G+ + F++ D +LA G +
Sbjct: 110 VGAVQAEGQNGLIVGVDTKREFTQKPWFSLQSQDGVGRGESVGELALLDVPEDGIILGSS 169
Query: 172 SPYGDVTPMG-MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVF 230
+ G ++ + ++G++Y +L Q ++ IEV
Sbjct: 170 AARVLDKNAGDRLEINEETFTVFGVLAPMGTEEDGLIYANLPVVQGLLGRPGELTMIEVS 229
Query: 231 VK-DPDAIEKTHENIVRILGNGVVV 254
+ IE+ + L N V+
Sbjct: 230 AYCNFCPIEEVVIGLSDALPNANVI 254
>gi|78778237|ref|YP_394552.1| hypothetical protein Suden_2043 [Sulfurimonas denitrificans DSM
1251]
gi|78498777|gb|ABB45317.1| Protein of unknown function DUF214 [Sulfurimonas denitrificans DSM
1251]
Length = 403
Score = 43.6 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 27/277 (9%), Positives = 79/277 (28%), Gaps = 22/277 (7%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +A+R + + S ++ +G++IG+ ++I ++ + + + + +
Sbjct: 1 MIQN-AFFLAFREIRRSAMR------SILTTLGIVIGIASVIAMVMLGDATTAFITQNIS 53
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ ++++ + G + + +
Sbjct: 54 KLGTNMLMVIPGQERKGPPSSSLMAKKFTHSDIEAIKKEIANLRGAAPVGSTMIRAVYGN 113
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVI-----IGKDLARNLGISIGDKINILSPYGDV 177
+ + ++ S + ++ F G+ GK + + L P G
Sbjct: 114 QNYSTTIEGSNNDYFIVKDWVFASGRNFNETELRSGKAVCVIGESVKKELYGDLDPIGTS 173
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
+ + F + ++ ++ Q + +S I + + I
Sbjct: 174 MRLENFSCEVIGLLESKGAAMFGMDQDDIIVAPIRMFQRRISGNQDISRIMLSANSSENI 233
Query: 238 EKTH----------ENIVRILGNGVVVIDWQQRYQIF 264
E I N V D ++ Q
Sbjct: 234 EDVKASTIMLMQERRRIGLNQDNDFFVHDMREMVQTL 270
>gi|302870101|ref|YP_003838738.1| hypothetical protein Micau_5656 [Micromonospora aurantiaca ATCC
27029]
gi|315503623|ref|YP_004082510.1| hypothetical protein ML5_2840 [Micromonospora sp. L5]
gi|302572960|gb|ADL49162.1| protein of unknown function DUF214 [Micromonospora aurantiaca ATCC
27029]
gi|315410242|gb|ADU08359.1| protein of unknown function DUF214 [Micromonospora sp. L5]
Length = 394
Score = 43.6 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 32/243 (13%), Positives = 82/243 (33%), Gaps = 12/243 (4%)
Query: 12 AWR----YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
AWR L +NR S ++ +GV+IGV ++++++++ G ++ + ++V G+ +
Sbjct: 6 AWRVASDALRANRMR------SLLTMLGVIIGVASVVILVAIGTGTKQQVEQQVEGLGSN 59
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+++ V + + LD ++SG + +
Sbjct: 60 LLLVVPGRIEVGNAPVVSPLDLSDADAVSRVVGDPGRVAVTVASGATARAGNRSDFTTVQ 119
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ + + + G + + + + +
Sbjct: 120 GVLETTPSVFTRSLSRGRYLTGADVDTSRRVAVLGDSVARALFPDRDPLGQQVTLAGVRF 179
Query: 188 SYTVLG-MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ + V++ + AQ + + + GI V D + I++ + IV
Sbjct: 180 RVIGVFAPLGQSLGVDRDDEVHVPVTAAQRLWGTQ-RIDGIAVKAPDRERIDELGDRIVA 238
Query: 247 ILG 249
L
Sbjct: 239 ELS 241
>gi|242243270|ref|ZP_04797715.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus epidermidis W23144]
gi|242233219|gb|EES35531.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus epidermidis W23144]
Length = 373
Score = 43.6 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 23/217 (10%), Positives = 62/217 (28%)
Query: 33 FIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPD 92
IG++IG+ ++I +MS+ NGF++ ++ Y + N D
Sbjct: 1 MIGIIIGIASVITIMSLGNGFKKSTTEQFNNAGAGKNQASISYMTENMDAPKNNPFKQED 60
Query: 93 VIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVII 152
+ V ++ + + ++ + +
Sbjct: 61 MSVVEQVNGVKSAKVKEDKDSTYSVKITNTHGSSDASLKKVDKLTDVDEGKGFTNDDNEV 120
Query: 153 GKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQ 212
+ +A N + + G G + + ++ + +
Sbjct: 121 LEKVAVIDKKIAKKVFNNHAMGQSIYVNGEGFKVVGVSDSSEVDESGMPIESLIQIPTKT 180
Query: 213 EAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
+ NL + + V V+ + + + + L
Sbjct: 181 FNKYMGNLTQGMPQLLVTVEKGSDKKDVGKKVEKALN 217
>gi|21227053|ref|NP_632975.1| ABC transporter, permease protein [Methanosarcina mazei Go1]
gi|20905377|gb|AAM30647.1| ABC transporter, permease protein [Methanosarcina mazei Go1]
Length = 404
Score = 43.6 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 28/251 (11%), Positives = 74/251 (29%), Gaps = 8/251 (3%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A + S + S ++ +G++IGV A+I+ S+ F + V + + +I
Sbjct: 10 IASGSIRSAKLR------SALTTLGIVIGVAAVIINASLGASFNQFFTDEVSSVGSNFII 63
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
P + Y + P ++ V P + ++ LS S +V +
Sbjct: 64 AYSDQPNLFYDSELEIIKNTPGILGVSPRKTVSGEINYLSDVKSVSIVGVNGDFQEIQGI 123
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
+ + + G + K+ +
Sbjct: 124 KMEEGSFLTDKDIYSAVLGYDLAKEEFGRSISHRSSVDIAFRQEDGTLVIKKFKVKGILE 183
Query: 191 VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN 250
+ + +VY+ + ++ + + I +++ + L
Sbjct: 184 DSKETIVGGDGSTDMIVYIPISTMNEMTGEKD-YGAFFAMAESSENIGSISKDVDKRLAR 242
Query: 251 GVVVIDWQQRY 261
+ + +
Sbjct: 243 SFGISE-RDLN 252
>gi|117619856|ref|YP_855302.1| macrolide-specific ABC-type efflux carrier [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
gi|134048473|sp|A0KGB3|MACB1_AERHH RecName: Full=Macrolide export ATP-binding/permease protein MacB 1
gi|117561263|gb|ABK38211.1| macrolide-specific ABC-type efflux carrier [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
Length = 648
Score = 43.6 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 30/255 (11%), Positives = 80/255 (31%), Gaps = 8/255 (3%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A + + R F ++ +G++IG+ A++ V+++ G ++ ++ + +
Sbjct: 258 FKMALLAMRAQRMRTF------LTMLGIIIGIAAVVSVVALGRGSQQQVLANINAMGTST 311
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ D + A + + D + + L++ + +
Sbjct: 312 LEIFPGSGFGDRRAEAVQTLRVEDAEALAGLGYVHSVTPSLATSVTLRRGSQAVLGSVNG 371
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLAR--NLGISIGDKINILSPYGDVTPMGMGIRS 186
+ F + G + S+ + +
Sbjct: 372 VGEQFFQVRGYRLLQGMLFDAASVTALAQEVVIDENSLARLFGAGESPLGQVILLGSLPC 431
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ V+ + F +N V++ A ++ + I V V+D A+ + I R
Sbjct: 432 RVIGVVARNQSGFGSDENLNVWIPHTTAMTRMLGQSHLRSISVRVQDEVALAAAEDGISR 491
Query: 247 ILGNGVVVIDWQQRY 261
+L D+
Sbjct: 492 LLRERHGAQDFFVLN 506
>gi|20092755|ref|NP_618830.1| ABC transporter, permease protein [Methanosarcina acetivorans C2A]
gi|19918048|gb|AAM07310.1| ABC transporter, permease protein [Methanosarcina acetivorans C2A]
Length = 409
Score = 43.6 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 28/226 (12%), Positives = 66/226 (29%), Gaps = 1/226 (0%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IGV A+I+ S+ F + V + + +I P + Y ++
Sbjct: 27 SALTTLGIVIGVAAVIINASLGASFNQFFTDEVTSVGSNFIIAYSDQPNIFYDSELEMIE 86
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
P + V P + +S LS S +V + + + +
Sbjct: 87 NTPGISGVSPRKTVSGEISYLSDTKSVSIVGVNGDFQEIQGIEMEEGSFLTDKDIYSTVL 146
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
G + K+ + + +VY
Sbjct: 147 GYDLAKEEFGRSISHRSTVDIAFRQEDGTLIEKSFKVKGVLEDSKETILGGDGSTDMIVY 206
Query: 209 MSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVV 254
+ + E+ + + + I + + + L +
Sbjct: 207 IPISVMNEMTGEED-YGALFAMAESSENIGTVSDEVDKRLARNFGI 251
>gi|194336696|ref|YP_002018490.1| protein of unknown function DUF214 [Pelodictyon phaeoclathratiforme
BU-1]
gi|194309173|gb|ACF43873.1| protein of unknown function DUF214 [Pelodictyon phaeoclathratiforme
BU-1]
Length = 421
Score = 43.6 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 30/250 (12%), Positives = 85/250 (34%), Gaps = 20/250 (8%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A+ + +N+ +F ++ +GV+IG++A+ ++ + +NG K + +
Sbjct: 15 SLKMAFYQIRANKIRSF------LTALGVIIGIVAITMMGTAINGIDLGFEKSLAMLGYD 68
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
V+ QK Q+ R A + + S
Sbjct: 69 VIYVQKSSWSTMGQWWRYRNRPDLKTNYADQLNRIIADTPNSELLIAVPQMSTYQASAKY 128
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKI---------NILSPYGDVT 178
+ F + ++ + + S+ ++ L P
Sbjct: 129 RERILEQVFSLGTTQEYLQTASGNLSTGRFFTAAESLSSEMVAVIGDDIATGLFPGEPAL 188
Query: 179 PMGMGIRSKSYTVLGMFRMRFP----DYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
+ ++++ ++G+F+ + + + M L + + ++ I V +K+
Sbjct: 189 GKSIQLKNRKLRIIGIFKKQGKFLGLFSFDNQIIMPLGAFEKVYGKNMFIT-IRVKIKNQ 247
Query: 235 DAIEKTHENI 244
+ + + E +
Sbjct: 248 ERVAEAKEEL 257
>gi|315650841|ref|ZP_07903888.1| ABC superfamily ATP binding cassette transporter [Eubacterium
saburreum DSM 3986]
gi|315486934|gb|EFU77269.1| ABC superfamily ATP binding cassette transporter [Eubacterium
saburreum DSM 3986]
Length = 398
Score = 43.6 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + + +N+ +F ++ +G++IGV A+++++SVM G+ +M+K + + +
Sbjct: 10 SFKLAIKSIIANKMRSF------LTMLGLIIGVSAVVILVSVMMGYLNNMVKSFMEMGAN 63
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQ 103
+ + + DF + V ++ Q
Sbjct: 64 TITVSLVNMPARHASVDQMYDFFNENRDVFSEMTPQ 99
>gi|308126291|ref|ZP_05909045.2| macrolide export ATP-binding/permease protein MacB [Vibrio
parahaemolyticus AQ4037]
gi|308110969|gb|EFO48509.1| macrolide export ATP-binding/permease protein MacB [Vibrio
parahaemolyticus AQ4037]
Length = 468
Score = 43.6 bits (100), Expect = 0.029, Method: Composition-based stats.
Identities = 24/242 (9%), Positives = 79/242 (32%), Gaps = 7/242 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A + S+R F ++ +G++IG+ +++ V+++ NG ++ ++ + + +
Sbjct: 78 ALKMALLAMSSHRMRTF------LTMLGIIIGIASVVSVVALGNGSQQQILSNISSMGTN 131
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + D + + D + + LS+ + + +
Sbjct: 132 TIDVRPGKGFGDRRSGRVKTLTADDAKSLESLPFVDSVTPSLSNSLTVRYANQDATASVE 191
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLAR-NLGISIGDKINILSPYGDVTPMGMGIRS 186
+ + R G + + + ++ +
Sbjct: 192 GVGEDYFRVRGYEIAKGQFWDEESVNSLAQEAVIDDNTRKEMFADRNPIGEVIFLGSLPV 251
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ V F + D +++ + ++GI V + + ++I+
Sbjct: 252 RIVGVTQKKEDAFGNSDALKIWVPYTTMSGRMMGQRYLNGITVRIDENAPSAAVEQSIIN 311
Query: 247 IL 248
+L
Sbjct: 312 LL 313
>gi|225552026|ref|ZP_03772966.1| lipoprotein releasing factor [Borrelia sp. SV1]
gi|225371024|gb|EEH00454.1| lipoprotein releasing factor [Borrelia sp. SV1]
Length = 375
Score = 43.6 bits (100), Expect = 0.029, Method: Composition-based stats.
Identities = 33/220 (15%), Positives = 74/220 (33%), Gaps = 5/220 (2%)
Query: 50 MNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGL 109
MNGF+ D +V Q ++ I + + Q
Sbjct: 1 MNGFQNDF----FLSITNVESGNLKIENELTQEEIKKIKKIEGIKHINKIYETQGIGIQN 56
Query: 110 SSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN 169
+ + + + D QN S + +IIG L+ N + D +
Sbjct: 57 YYYPTILNIIAVDIKDLKKDQNFISFTGLEKDELDLKDNEIIIGNVLSHNFNLFENDPLE 116
Query: 170 ILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV 229
++ T + + KS+ + +F+ + + +++M++ L N+ +V
Sbjct: 117 LIITDEIKTLISLENDIKSFKIKSIFKSNYAKINETLIFMNIDYFIKNKILHNSGINYQV 176
Query: 230 FVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
K+ + K E I + + + W + + F+ +
Sbjct: 177 KTKNLNPSNKLIEKI-KAVNPKIKAKTWNEYNKEFYKILK 215
>gi|226945019|ref|YP_002800092.1| hypothetical protein Avin_29500 [Azotobacter vinelandii DJ]
gi|226719946|gb|ACO79117.1| conserved hypothetical protein [Azotobacter vinelandii DJ]
Length = 416
Score = 43.6 bits (100), Expect = 0.029, Method: Composition-based stats.
Identities = 39/279 (13%), Positives = 95/279 (34%), Gaps = 24/279 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASF-ISFIGV-MIGVMALIVVMSV------------MNGFR 54
+A R LF N + + ++ + + F V +G + S+ M+ F+
Sbjct: 5 FKLATRNLFRNGRRSLFTVMAIGLGFAAVNALGGFTAYIFTSLEDSYIHIQGNGHMSIFK 64
Query: 55 EDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
+ + ++ ++ +D A+ + + + VS +
Sbjct: 65 KGFLDEGKLDPTRYLLNEQEVATIDEVLAAHPEILVSTPELNISGLVSNGEVSTIFLASG 124
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
V + S + + + ++ GV + + LA L GD + +++P
Sbjct: 125 RVSSKVDVIRSRSRTKVGNMQLFDGQPMTDEQSNGVGMSQGLADQLRFKQGDTVVVMAPT 184
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
+ + F ++ ++ ++L+ AQ ++ +V I V + D
Sbjct: 185 VSGQINALDGQMLQT-----FNSPVEALEDKLMLVNLEFAQNLYDT-TSVDRINVLLGDG 238
Query: 235 DAIEKTHENIVRIL---GNGVVVIDWQQRYQIFFSCYES 270
E + L G V + W + F++ ++
Sbjct: 239 MLTEPMRATLRNELAARGLEVEIKTWNEL-STFYTKVKN 276
>gi|323344299|ref|ZP_08084525.1| ABC superfamily ATP binding cassette transporter, membrane
protein [Prevotella oralis ATCC 33269]
gi|323095028|gb|EFZ37603.1| ABC superfamily ATP binding cassette transporter, membrane
protein [Prevotella oralis ATCC 33269]
Length = 412
Score = 43.6 bits (100), Expect = 0.029, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A R + +N+ +F ++ +G++IG+ ++I ++++ G + + + + ++
Sbjct: 7 LKIALRAIAANKMRSF------LTALGIIIGIASVITMLAIGQGTKRSIQANIAEMGSNM 60
Query: 69 VI 70
++
Sbjct: 61 IM 62
>gi|313110710|ref|ZP_07796572.1| putative ATP-binding/permease fusion ABC transporter [Pseudomonas
aeruginosa 39016]
gi|310883074|gb|EFQ41668.1| putative ATP-binding/permease fusion ABC transporter [Pseudomonas
aeruginosa 39016]
Length = 663
Score = 43.6 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +++
Sbjct: 280 AWRVMWINR------FRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMGAFGSNIIY 332
>gi|229591410|ref|YP_002873529.1| putative ABC transporter ATP-binding protein [Pseudomonas
fluorescens SBW25]
gi|229363276|emb|CAY50378.1| putative ABC transporter ATP-binding protein [Pseudomonas
fluorescens SBW25]
Length = 656
Score = 43.6 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +++
Sbjct: 272 AWRVMWINR------FRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMGAFGSNIIY 324
>gi|218891634|ref|YP_002440501.1| putative ATP-binding/permease fusion ABC transporter [Pseudomonas
aeruginosa LESB58]
gi|218771860|emb|CAW27639.1| probable ATP-binding/permease fusion ABC transporter [Pseudomonas
aeruginosa LESB58]
Length = 663
Score = 43.6 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +++
Sbjct: 280 AWRVMWINR------FRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMGAFGSNIIY 332
>gi|107101834|ref|ZP_01365752.1| hypothetical protein PaerPA_01002879 [Pseudomonas aeruginosa PACS2]
gi|296389200|ref|ZP_06878675.1| putative ATP-binding/permease fusion ABC transporter [Pseudomonas
aeruginosa PAb1]
Length = 663
Score = 43.6 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +++
Sbjct: 280 AWRVMWINR------FRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMGAFGSNIIY 332
>gi|152986401|ref|YP_001348230.1| putative ABC transporter ATP-binding protein/permease [Pseudomonas
aeruginosa PA7]
gi|150961559|gb|ABR83584.1| probable ATP-binding/permease fusion ABC transporter [Pseudomonas
aeruginosa PA7]
Length = 663
Score = 43.6 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +++
Sbjct: 280 AWRVMWINR------FRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMGAFGSNIIY 332
>gi|60279990|gb|AAX16333.1| PA2390 [Pseudomonas aeruginosa]
Length = 663
Score = 43.6 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +++
Sbjct: 280 AWRVMWINR------FRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMGAFGSNIIY 332
>gi|77458083|ref|YP_347588.1| hypothetical protein Pfl01_1856 [Pseudomonas fluorescens Pf0-1]
gi|122064298|sp|Q3KF57|MACB1_PSEPF RecName: Full=Macrolide export ATP-binding/permease protein MacB 1
gi|77382086|gb|ABA73599.1| putative ABC transporter ATP-binding protein [Pseudomonas
fluorescens Pf0-1]
Length = 657
Score = 43.6 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +++
Sbjct: 273 AWRVMWINR------FRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMGAFGSNIIY 325
>gi|15597586|ref|NP_251080.1| PvdT [Pseudomonas aeruginosa PAO1]
gi|81857201|sp|Q9I190|MACB_PSEAE RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|9948431|gb|AAG05778.1|AE004665_5 PvdT [Pseudomonas aeruginosa PAO1]
Length = 663
Score = 43.6 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +++
Sbjct: 280 AWRVMWINR------FRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMGAFGSNIIY 332
>gi|254235394|ref|ZP_04928717.1| hypothetical protein PACG_01299 [Pseudomonas aeruginosa C3719]
gi|254240823|ref|ZP_04934145.1| hypothetical protein PA2G_01495 [Pseudomonas aeruginosa 2192]
gi|60280008|gb|AAX16350.1| PA2390 [Pseudomonas aeruginosa]
gi|126167325|gb|EAZ52836.1| hypothetical protein PACG_01299 [Pseudomonas aeruginosa C3719]
gi|126194201|gb|EAZ58264.1| hypothetical protein PA2G_01495 [Pseudomonas aeruginosa 2192]
Length = 663
Score = 43.6 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +++
Sbjct: 280 AWRVMWINR------FRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMGAFGSNIIY 332
>gi|116050331|ref|YP_790852.1| putative ATP-binding/permease fusion ABC transporter [Pseudomonas
aeruginosa UCBPP-PA14]
gi|122259452|sp|Q02MI4|MACB_PSEAB RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|60279959|gb|AAX16304.1| PA2390 [Pseudomonas aeruginosa]
gi|115585552|gb|ABJ11567.1| putative ATP-binding/permease fusion ABC transporter [Pseudomonas
aeruginosa UCBPP-PA14]
Length = 663
Score = 43.6 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
AWR ++ NR + ++ +G++IGV +++V+++V G + ++ ++ +++
Sbjct: 280 AWRVMWINR------FRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMGAFGSNIIY 332
>gi|330830469|ref|YP_004393421.1| Macrolide export ATP-binding/permease macB 2 [Aeromonas veronii
B565]
gi|328805605|gb|AEB50804.1| Macrolide export ATP-binding/permease protein macB 2 [Aeromonas
veronii B565]
Length = 661
Score = 43.6 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 28/242 (11%), Positives = 79/242 (32%), Gaps = 7/242 (2%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
+ ++R F ++ +G++IG+ A++ V+++ G R +I ++ + + +
Sbjct: 279 MLAHRMRTF------LTMLGIIIGIAAVVSVVALGQGARAKVIDQINAMGTNTIEIFPGK 332
Query: 76 PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSR 135
D + + + D+ +L + S G ++ + + + N + +
Sbjct: 333 GWGDEKMASIQTLNKGDLDALLGQPYLAGASPEIGSSGQLRYRNKTNSGNVTGVGNDYFK 392
Query: 136 FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMF 195
G + I + A + + + +G +
Sbjct: 393 VKGMTLVSGRLLEWQDIQQRAAVAVVDKKSITSLLGKEDPVGKVVLVGTLPVRIVGVVSQ 452
Query: 196 RMRFPDYDNG-MVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVV 254
F +++ ++ S I + VKD + ++ ++ V
Sbjct: 453 ETGFGPTSQSVNIWLPYSAVMSRLISQHHFSQITIRVKDGVQPALAEQAVIELITKRHGV 512
Query: 255 ID 256
D
Sbjct: 513 KD 514
>gi|114778142|ref|ZP_01453029.1| hypothetical protein SPV1_00752 [Mariprofundus ferrooxydans PV-1]
gi|114551560|gb|EAU54114.1| hypothetical protein SPV1_00752 [Mariprofundus ferrooxydans PV-1]
Length = 385
Score = 43.6 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 41/244 (16%), Positives = 78/244 (31%), Gaps = 11/244 (4%)
Query: 33 FIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANR------ 86
+ +I S+M G + + V+ +N + D
Sbjct: 1 MSAMAFACFIMIFFSSLMEGMIQGSERSVVAMNMGDIQIHAPGYRDDPDLYTRIEHADAL 60
Query: 87 LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDR 146
+D + + + SGV +RGI + + + D
Sbjct: 61 VDSLEKHGYRAASRIYAYGLLAANMASSGVHLRGIDLTREVRVTELYKHVSSGQWLDEHD 120
Query: 147 GKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGM 206
+GV++GK LA LG+S GD++ + D R + + D
Sbjct: 121 PRGVVLGKKLAGTLGVSPGDELVFVGQSADGFMANELFRVRGI-----LKSVSDGIDRMG 175
Query: 207 VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFS 266
++M +Q + + + I V +D V L G+ V +W+Q +
Sbjct: 176 LFMPMQSLRDLMVIPHGAHEIVVVRQDRSTDLTAETASVARLAPGLEVKNWKQLMPVIAR 235
Query: 267 CYES 270
E+
Sbjct: 236 MIET 239
>gi|15840412|ref|NP_335449.1| hypothetical protein MT1015 [Mycobacterium tuberculosis CDC1551]
gi|13880581|gb|AAK45263.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
Length = 855
Score = 43.6 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 75/248 (30%), Gaps = 18/248 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
AWR L + +G+ +GV +IV + V + +
Sbjct: 13 WRTAWRRLRQRP------FQYILLVLGIALGVA-MIVAIDVSSNSAQRAFDLSAAAITGK 65
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ P + G GL + +
Sbjct: 66 STHRLVSGPAGVDQQLYFDLRRHGYDFSAPVIEGYVLARGLGNRAMQFMGTDPFAESAFR 125
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
++ + R GV++ + +A+ G+++GD+I + G
Sbjct: 126 SPLWSNQNIAELGGFLTRPNGVVLSRQVAQKYGLAVGDRIALQ-------VKGAPTTVTL 178
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+L + ++ + AQ F++ +S I++ +KD E T I + L
Sbjct: 179 VGLLTPADEVSNQKLSDLIIADISTAQELFHMPGRLSHIDLIIKD----EATATRIQQRL 234
Query: 249 GNGVVVID 256
GV +
Sbjct: 235 PAGVRMET 242
>gi|297624212|ref|YP_003705646.1| hypothetical protein Trad_1989 [Truepera radiovictrix DSM 17093]
gi|297165392|gb|ADI15103.1| protein of unknown function DUF214 [Truepera radiovictrix DSM
17093]
Length = 384
Score = 43.6 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 28/244 (11%), Positives = 77/244 (31%), Gaps = 15/244 (6%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A + L F ++ +G+ + V + ++ +S+ G R+ + + G+ +
Sbjct: 3 WSLALQSLRLRPVRTF------LTALGIAVAVGSTVIFLSLGEGLRQIFAEELSGLGPDI 56
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ +F A L +P+V L + +L+ + +
Sbjct: 57 -------RVGADEFDALSLSALPEVPLTLADELRAEAPQLGITSVVPILIYTRAGFTPTS 109
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG--IRS 186
VI G+ L + + + + + +G +
Sbjct: 110 TFVFQGLPTDIDIRSVYFDYTVIEGRALDASDEGAFVAVVGEQAALRNDIALGDTLRLNP 169
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
++ + + + + L Q +L + V+ + V + +P + E +
Sbjct: 170 EASFEVVGIARSGGGLVDSTIVLPLTSLQTALDLRDRVTLLAVSLTNPARAAEVAETLSE 229
Query: 247 ILGN 250
+
Sbjct: 230 RYPD 233
>gi|296271916|ref|YP_003654547.1| hypothetical protein Arnit_0375 [Arcobacter nitrofigilis DSM 7299]
gi|296096091|gb|ADG92041.1| protein of unknown function DUF214 [Arcobacter nitrofigilis DSM
7299]
Length = 403
Score = 43.6 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 36/269 (13%), Positives = 91/269 (33%), Gaps = 23/269 (8%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++A + + N + S ++ +G++IGV ++I ++ + +G + + + +
Sbjct: 5 AFLIAIKEIRRN------ILRSILTVLGIVIGVASVIGMVMLGDGTTASVKANIEKLGTN 58
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
++I + N + +GV + ++ S S
Sbjct: 59 MLILRVGQERRGGPRTDNSAKPFKLTDVAAIKNQIDNLKAVAPDNSTGVNLIYLNKSYTS 118
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ + + ++ G+ +L I + +GD P+G IR K
Sbjct: 119 SVVGTNNDYFVIKDWKLKDGRYF-DDSELNSGKSSCILGTTIVKQLFGDENPVGAKIRLK 177
Query: 188 SYT------VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
S++ + F + +V + ++ Q V I + V I++
Sbjct: 178 SFSCNVIGVLESKGASTFGQDQDEIVVVPIRMLQRKIQGNKDVKSIVISVNSNKNIKRAK 237
Query: 242 ENIVRIL----------GNGVVVIDWQQR 260
E+I ++ + + D +
Sbjct: 238 EDIKLLMQNRRAIKVGESDNFYIRDMEDL 266
>gi|88802042|ref|ZP_01117570.1| putative lipoprotein releasing system transmembrane protein
[Polaribacter irgensii 23-P]
gi|88782700|gb|EAR13877.1| putative lipoprotein releasing system transmembrane protein
[Polaribacter irgensii 23-P]
Length = 345
Score = 43.6 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 15/110 (13%), Positives = 31/110 (28%)
Query: 161 GISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL 220
KI + P ++G++ + Q L
Sbjct: 106 NYGAPLKIMVPKPGTGFINPRNPFYKIETQIVGIYEGTEEFESKFVFTSIGQARSLLHFK 165
Query: 221 ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
EN V+ + + + D + + + LG V Q +F+ +
Sbjct: 166 ENQVTALALKLTDSQDADAVADLLRMRLGKMFKVQTKAQLNAVFYKVINT 215
>gi|270285212|ref|ZP_06194606.1| hypothetical protein CmurN_02158 [Chlamydia muridarum Nigg]
gi|270289231|ref|ZP_06195533.1| hypothetical protein CmurW_02218 [Chlamydia muridarum Weiss]
gi|301336608|ref|ZP_07224810.1| hypothetical protein CmurM_02210 [Chlamydia muridarum MopnTet14]
Length = 503
Score = 43.6 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 33/249 (13%), Positives = 73/249 (29%), Gaps = 10/249 (4%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ E+++A++YL RK+ SI S S V + V +V MSV++G ++ +
Sbjct: 1 MKLELLLAFKYLIPRRKSFSSSIVSVFSVGIVALVVWLSVVFMSVIHGLQQ------RWV 54
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ ++ + I + ++ L +
Sbjct: 55 GDLARLHASIRIEPSDKYYESYYYQIDSHAEASQYIYKTIGEKLL--SDQTDPYDPDVDF 112
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ D + L G + + + + D I
Sbjct: 113 ALPETFPAPEFSVSGKIVDPVHIANEKMLSFLPSRKGSFVEFEEGMGYVHMDRASQSSRI 172
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+S + + + + + N NA S E ++ D +++ +
Sbjct: 173 EPRSLSQYIAYSSEAFYQQRVLPFEETDYSTEVLNRFNASS--EGWLADFLLLQEKFRGV 230
Query: 245 VRILGNGVV 253
IL
Sbjct: 231 SVILPVHYR 239
>gi|108762317|ref|YP_628390.1| putative ABC transporter permease [Myxococcus xanthus DK 1622]
gi|108466197|gb|ABF91382.1| putative ABC transporter, permease protein [Myxococcus xanthus DK
1622]
Length = 408
Score = 43.6 bits (100), Expect = 0.030, Method: Composition-based stats.
Identities = 28/246 (11%), Positives = 75/246 (30%), Gaps = 17/246 (6%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A L SNR + ++ +G+ +GV L+ ++ ++ G ++ I + +
Sbjct: 13 IALFSLRSNRLR------TVLTTVGIGVGVCTLLAIVGIIQGINRSFEDQLSSIGANTLQ 66
Query: 71 QQKYYPLVDYQFIANRLDFI------PDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
K+ ++ + + R P ++ V A + G + + S
Sbjct: 67 ISKFPWTLNGDWWSYRNRKDLSADLVPPILNASEHVLAAAPLFFERVEGRFLDRKIGSVL 126
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + D + + + + L P + +
Sbjct: 127 LVGTTPDYATV---GSFALERGRFLTHADVDNRAQVAVIGAELVRSLFPGVNPVGQRILF 183
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVS--GIEVFVKDPDAIEKTHE 242
K + V+G + + + ++ + I V + P+ +
Sbjct: 184 EGKPFRVVGTLEAKGTILGENQDLVVVVPSRTFLAHFGKKRSPNIAVALTSPEHAPAVVD 243
Query: 243 NIVRIL 248
+ +L
Sbjct: 244 KLTAVL 249
>gi|149923256|ref|ZP_01911667.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Plesiocystis pacifica SIR-1]
gi|149815913|gb|EDM75432.1| lipoprotein releasing system, transmembrane protein, LolC/E family
[Plesiocystis pacifica SIR-1]
Length = 483
Score = 43.6 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 30 FISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDF 89
+S G+ IGV +L VV+ V +G + M+ + +NGH +I + +Y +A+RL
Sbjct: 45 VVSIAGLAIGVGSLFVVLGVASGMEQAMVSSLARLNGHAMITKYGLSFDEYDELADRLVA 104
Query: 90 IPDVIKVLPFVS 101
P V PFV
Sbjct: 105 DPRVRGASPFVF 116
>gi|215402803|ref|ZP_03414984.1| putative adhesion component transport transmembrane protein ABC
transporter [Mycobacterium tuberculosis 02_1987]
gi|289744723|ref|ZP_06504101.1| adhesion component transport transmembrane protein ABC transporter
[Mycobacterium tuberculosis 02_1987]
gi|289685251|gb|EFD52739.1| adhesion component transport transmembrane protein ABC transporter
[Mycobacterium tuberculosis 02_1987]
Length = 855
Score = 43.6 bits (100), Expect = 0.031, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 75/248 (30%), Gaps = 18/248 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
AWR L + +G+ +GV +IV + V + +
Sbjct: 13 WRTAWRRLRQRP------FQYILLVLGIALGVA-MIVAIDVSSNSAQRAFDLSAAAITGK 65
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ P + G GL + +
Sbjct: 66 STHRLVSGPAGVDQQLYVDLRRHGYDFSAPVIEGYVLARGLGNRAMQFMGTDPFAESAFR 125
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
++ + R GV++ + +A+ G+++GD+I + G
Sbjct: 126 SPLWSNQNIAELGGFLTRPNGVVLSRQVAQKYGLAVGDRIALQ-------VKGAPTTVTL 178
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+L + ++ + AQ F++ +S I++ +KD E T I + L
Sbjct: 179 VGLLTPADEVSNQKLSDLIIADISTAQELFHMPGRLSHIDLIIKD----EATATRIQQRL 234
Query: 249 GNGVVVID 256
GV +
Sbjct: 235 PAGVRMET 242
>gi|193212469|ref|YP_001998422.1| hypothetical protein Cpar_0806 [Chlorobaculum parvum NCIB 8327]
gi|193085946|gb|ACF11222.1| protein of unknown function DUF214 [Chlorobaculum parvum NCIB 8327]
Length = 421
Score = 43.6 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 38/251 (15%), Positives = 83/251 (33%), Gaps = 20/251 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A + +N+ +F ++ +GV+IG++A+ ++ + +NG + + +
Sbjct: 15 SLNIAVYQIKANKIRSF------LTALGVIIGIVAITMMGTAINGIDIGFDRSLAMLGYD 68
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
VV QK + R + A + + I S
Sbjct: 69 VVYVQKGSWSTMGSWWRYRNRPDIETRYADEINRIIADDPNSELVVAVPQMSTIQASARY 128
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK---------INILSPYGDVT 178
+ F + D+ + S L P G V
Sbjct: 129 RDREILQIFALGTNQDYPLTASGDLSAGRFFTAQESAAGDPVCVIGDDIATGLFPDGRVV 188
Query: 179 PMGMGIRSKSYTVLGMFRMRFP----DYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
+ +R+ + V+G+F+ + + + M L+ + + V+ I V VKD
Sbjct: 189 GKSIRLRNHNVRVVGVFKKQGKFLGLFSFDNQLIMPLRAFTKVYGKTSMVT-IRVKVKDE 247
Query: 235 DAIEKTHENIV 245
I + + +
Sbjct: 248 KRIPEAKDELT 258
>gi|224826364|ref|ZP_03699466.1| protein of unknown function DUF214 [Lutiella nitroferrum 2002]
gi|224601465|gb|EEG07646.1| protein of unknown function DUF214 [Lutiella nitroferrum 2002]
Length = 401
Score = 43.6 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 38/251 (15%), Positives = 87/251 (34%), Gaps = 23/251 (9%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A R + N +F ++ +G++IGV A+I+++++ G + +++ + +
Sbjct: 5 AFALALREIRRNVLRSF------LTILGIVIGVAAVIIMVTLGGGATLQVTQQIASLGSN 58
Query: 68 VVIQQKYYPLVDYQFIANRLD----------FIPDVIKVLPFVSGQAFVSGLSSGGSGVL 117
++I L Q + L IP + V P S V + S +
Sbjct: 59 LLIISPSRRLGPGQNVGAALFSVGDAQALVREIPALAAVAPMASRSLTVVYGHANWSTQV 118
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
+ + S + S IIG+ + L P G+
Sbjct: 119 IGTSNEYFTVRNLTLRSGRRFSDSELRAGAPACIIGQTVRDKLFGR-------QDPLGER 171
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
+ S + + + + M L+ Q V+ ++V V++ +
Sbjct: 172 IRVQGIACSVVGLLEPKGQSAMGSDQDDLAIMPLRAYQRRIAGNQDVNQLQVSVREGTST 231
Query: 238 EKTHENIVRIL 248
+ ++I ++
Sbjct: 232 SRAQQDIEHLM 242
>gi|296110762|ref|YP_003621143.1| Enterococcus faecalis plasmid pPD1 bacI [Leuconostoc kimchii
IMSNU 11154]
gi|295832293|gb|ADG40174.1| Enterococcus faecalis plasmid pPD1 bacI [Leuconostoc kimchii
IMSNU 11154]
Length = 393
Score = 43.6 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 34/54 (62%), Gaps = 7/54 (12%)
Query: 8 EVIV-AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
E+ V A+R L SN++ S ++ IG++IG+ ++I ++++ +G R M+K
Sbjct: 5 ELFVSAFRSLLSNKRR------SILTMIGIIIGIASVITILALGDGARVAMMKN 52
>gi|258648560|ref|ZP_05736029.1| putative ABC transporter, permease protein [Prevotella tannerae
ATCC 51259]
gi|260851336|gb|EEX71205.1| putative ABC transporter, permease protein [Prevotella tannerae
ATCC 51259]
Length = 414
Score = 43.6 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 32/262 (12%), Positives = 75/262 (28%), Gaps = 14/262 (5%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M +F + L N+ +F ++ G+ G+ LI +M GF+ M +
Sbjct: 1 MRLFDLDRWSETYESLSRNKARSF------LTAFGIFWGIFMLIFLMGGGQGFQRLMSRT 54
Query: 61 VLGINGHVVIQQKYYPLVDYQ----FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
G + + Y+ +LD + +
Sbjct: 55 FEGAAQNSCYVFPGETTIAYKGMQSQRTWQLDINDVERLKKKVSRLETVTPIIQQWSKTF 114
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
+ S N + R + I K + +
Sbjct: 115 QYDSKKANGTMRGVRSDYINIENPKIGYGRFINETDIIQKRKVCVIGKRIKEELFPDIEN 174
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPD----YDNGMVYMSLQEAQLYFNLENAVSGIEVFVK 232
+ + S Y ++G+ + + ++ Q ++L + +S + VK
Sbjct: 175 PCGRYIKLDSIYYRIVGVSKSNTNVGGGGNTSETAFIPFTTMQEIYHLGDNISFLTFTVK 234
Query: 233 DPDAIEKTHENIVRILGNGVVV 254
+ +T + + I+ ++
Sbjct: 235 KGYTVAETQDEVGDIIKEAHLI 256
>gi|15835047|ref|NP_296806.1| hypothetical protein TC0429 [Chlamydia muridarum Nigg]
gi|7190473|gb|AAF39285.1| conserved hypothetical protein [Chlamydia muridarum Nigg]
Length = 506
Score = 43.6 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 33/249 (13%), Positives = 73/249 (29%), Gaps = 10/249 (4%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ E+++A++YL RK+ SI S S V + V +V MSV++G ++ +
Sbjct: 4 MKLELLLAFKYLIPRRKSFSSSIVSVFSVGIVALVVWLSVVFMSVIHGLQQ------RWV 57
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ ++ + I + ++ L +
Sbjct: 58 GDLARLHASIRIEPSDKYYESYYYQIDSHAEASQYIYKTIGEKLL--SDQTDPYDPDVDF 115
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ D + L G + + + + D I
Sbjct: 116 ALPETFPAPEFSVSGKIVDPVHIANEKMLSFLPSRKGSFVEFEEGMGYVHMDRASQSSRI 175
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+S + + + + + N NA S E ++ D +++ +
Sbjct: 176 EPRSLSQYIAYSSEAFYQQRVLPFEETDYSTEVLNRFNASS--EGWLADFLLLQEKFRGV 233
Query: 245 VRILGNGVV 253
IL
Sbjct: 234 SVILPVHYR 242
>gi|306820479|ref|ZP_07454114.1| conserved hypothetical protein [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304551480|gb|EFM39436.1| conserved hypothetical protein [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 479
Score = 43.6 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 4 FSRFE-VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
++ E +A+ LF + S ++ +GV+IG ++I ++S+ G ++ +
Sbjct: 1 MNKIEIFKMAFTNLFRRKAR------SILAILGVLIGTASIITMVSIGLGMSKNFDDEM 53
>gi|78188957|ref|YP_379295.1| ABC transporter efflux protein [Chlorobium chlorochromatii CaD3]
gi|78171156|gb|ABB28252.1| ABC transporter efflux protein [Chlorobium chlorochromatii CaD3]
Length = 404
Score = 43.6 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 28/247 (11%), Positives = 68/247 (27%), Gaps = 20/247 (8%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A + +N+ +F ++ +GV+IG++A+ ++ + +NG K + + VV
Sbjct: 1 MALYQIKANKLRSF------LTALGVIIGIVAISMMGTAINGIERGFDKSLAMLGYDVVY 54
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
QK ++ R A + S +
Sbjct: 55 VQKVSWSGMGEWWRFRNRPDIKTDYASQINRIIAETPNSELLLAVPQRSTYQASATYRER 114
Query: 131 NSFSRFYGNVSNDFDRGKGVIIG-------------KDLARNLGISIGDKINILSPYGDV 177
F ++D+ + + G
Sbjct: 115 TLEQVFALGSTSDYLATASGTLTAGRFFTASEAASGAMVCSVGNDIAESLFPNEPALGKT 174
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
+ + + V M L + + ++ + I + +K + +
Sbjct: 175 IKLKNRKFRIIGVFRKQGKFLGLFSFDNQVIMPLTAFERVYG-KDQFTSIRIKIKSVEKL 233
Query: 238 EKTHENI 244
E E +
Sbjct: 234 ELAKEEL 240
>gi|325294599|ref|YP_004281113.1| hypothetical protein Dester_0399 [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065047|gb|ADY73054.1| protein of unknown function DUF214 [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 396
Score = 43.2 bits (99), Expect = 0.033, Method: Composition-based stats.
Identities = 33/261 (12%), Positives = 73/261 (27%), Gaps = 14/261 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ S F + +S + +F + +G++ GV ++++++S + G + +
Sbjct: 1 MMSFFVKDLILSLFYSKTR-------TFFALLGIVFGVSSVVLIVSAIEGSNLQANRVIK 53
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIK-VLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ V+ + N L+ L + + S +
Sbjct: 54 KLGPDSVLIVSGSIGSGPRGRTNNLELKDVKKISHLEGIFALTYGIVKPMMISNIQTSKF 113
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
S S Y + + +A +P G + +G
Sbjct: 114 SAVFGVGKNWLLSWDYKIEMGRGFTLNDLKNLRKVAVVGHDVSDFFYPGQNPIGKIILIG 173
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKT 240
+ + V++ + N VS I V D EK
Sbjct: 174 KTPFKIIGVYKRKGKTPNGHNLDNRVFIPYRVFDKVVEKTFNRVSIIRFRVLDISQYEKI 233
Query: 241 HENIVRIL-----GNGVVVID 256
+ +IL + +I
Sbjct: 234 VKETRQILLKNHKPDDFTIIT 254
>gi|260185896|ref|ZP_05763370.1| putative adhesion component transport transmembrane protein ABC
transporter [Mycobacterium tuberculosis CPHL_A]
gi|289446568|ref|ZP_06436312.1| adhesion component transport transmembrane protein ABC transporter
[Mycobacterium tuberculosis CPHL_A]
gi|289419526|gb|EFD16727.1| adhesion component transport transmembrane protein ABC transporter
[Mycobacterium tuberculosis CPHL_A]
Length = 855
Score = 43.2 bits (99), Expect = 0.033, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 75/248 (30%), Gaps = 18/248 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
AWR L + +G+ +GV +IV + V + +
Sbjct: 13 WRTAWRRLRQRP------FQYILLVLGIALGVA-MIVAIDVSSNSAQRAFDLSAAAITGK 65
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ P + G GL + +
Sbjct: 66 STHRLVSGPAGVDQQLYVDLRRHGYDFSAPVIEGYVLARGLGNRAMQFMGTDPFAESAFR 125
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
++ + R GV++ + +A+ G+++GD+I + G
Sbjct: 126 SPLWSNQNIAELGGFLTRPNGVVLSRQVAQKYGLAVGDRIALQ-------VKGAPTTVTL 178
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+L + ++ + AQ F++ +S I++ +KD E T I + L
Sbjct: 179 VGLLTPADEVSNQKLSDLIIADISTAQELFHMPGRLSHIDLIIKD----EATATRIQQRL 234
Query: 249 GNGVVVID 256
GV +
Sbjct: 235 PAGVRMET 242
>gi|59711712|ref|YP_204488.1| transporter [Vibrio fischeri ES114]
gi|59479813|gb|AAW85600.1| transporter [Vibrio fischeri ES114]
Length = 409
Score = 43.2 bits (99), Expect = 0.033, Method: Composition-based stats.
Identities = 32/258 (12%), Positives = 75/258 (29%), Gaps = 16/258 (6%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +AWR L+ ++ ++ ++ + ++ +M +E + +
Sbjct: 3 IKLAWRNLWRQKRRTILTASALALAL----------LLSLLMRSIQEGSYTANIENAARL 52
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+++ + D +P + Q + + +
Sbjct: 53 STGLIQLQNPEFKETQSIDDLLPMSDDFIAPTKQQPNIQFTLPRIETFSLAAAKDKSKGV 112
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKD------LARNLGISIGDKINILSPYGDVTPMGM 182
L N + L
Sbjct: 113 LVVGVDPQPENTYSSLADKVVQGAYFTATDKSVLLSEGLARYFQLNVGDEIVLYGQGYRG 172
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ Y + G+ PD +N ++Y+ +QEA F+ EN V+ + +D + +T +
Sbjct: 173 QTAAGLYVIKGIVHFPMPDLNNQLIYLPIQEAVQLFSTENQVTSWVLHTRDFSLLPQTVD 232
Query: 243 NIVRILGNGVVVIDWQQR 260
N+ + G V V W
Sbjct: 233 NLQKGYGQVVSVRPWNDL 250
>gi|300172316|ref|YP_003771481.1| ABC transporter permease [Leuconostoc gasicomitatum LMG 18811]
gi|299886694|emb|CBL90662.1| ABC transporter permease protein [Leuconostoc gasicomitatum LMG
18811]
Length = 393
Score = 43.2 bits (99), Expect = 0.033, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 34/54 (62%), Gaps = 7/54 (12%)
Query: 8 EVIV-AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
E+ V A+R L SN++ S ++ IG++IG+ ++I ++++ +G R M+K
Sbjct: 5 ELFVSAFRSLLSNKRR------SILTMIGIIIGIASVITILALGDGARVAMMKN 52
>gi|302390687|ref|YP_003826508.1| protein of unknown function DUF214 [Thermosediminibacter oceani
DSM 16646]
gi|302201315|gb|ADL08885.1| protein of unknown function DUF214 [Thermosediminibacter oceani
DSM 16646]
Length = 391
Score = 43.2 bits (99), Expect = 0.034, Method: Composition-based stats.
Identities = 11/97 (11%), Positives = 35/97 (36%), Gaps = 8/97 (8%)
Query: 5 SRFEVIV--AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
F + A R + + +F ++ +GV+IGV ++I ++++ G + + +
Sbjct: 1 MPFSAYIKMALRSITRKKMRSF------LTMLGVIIGVASVITLVAITQGTASQIEESIK 54
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPF 99
+ +++ + + +
Sbjct: 55 SLGANLIAVNITGRGPTNSLTYEEFQELSTKNPFIDY 91
>gi|255066598|ref|ZP_05318453.1| macrolide export ATP-binding/permease protein MacB [Neisseria sicca
ATCC 29256]
gi|255049182|gb|EET44646.1| macrolide export ATP-binding/permease protein MacB [Neisseria sicca
ATCC 29256]
Length = 645
Score = 43.2 bits (99), Expect = 0.034, Method: Composition-based stats.
Identities = 29/231 (12%), Positives = 77/231 (33%), Gaps = 4/231 (1%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG + ++ + + + + D + +
Sbjct: 269 SLLTMLGIIIGIASVVSVVALGNGSEKKILADISAMGTNTISIFPGRGFGDRRSGRIKTL 328
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I D + + +SGG+ ++ + + G
Sbjct: 329 TIDDAKVIAKQSYVASATPQTTSGGTLTYRNTDLSASLYGVGEQYFDVRGLKLESGRLFD 388
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ +D + K + + + + TV+G+ + + N V
Sbjct: 389 EGDVKEDAQVVVIDQ-NTKEKLFGTDVNPLGKTVLFNKRPLTVIGVMQKEENSFGNADVL 447
Query: 209 MSLQEAQLYFNL---ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
M + E+ + I V +KD + + + +L D
Sbjct: 448 MLWSPYTTVMHQITGESHTNSITVKIKDDANTQVAEKGLTELLKTRHGTED 498
>gi|224372646|ref|YP_002607018.1| efflux ABC transporter, permease protein [Nautilia profundicola
AmH]
gi|223589468|gb|ACM93204.1| efflux ABC transporter, permease protein [Nautilia profundicola
AmH]
Length = 402
Score = 43.2 bits (99), Expect = 0.034, Method: Composition-based stats.
Identities = 34/255 (13%), Positives = 78/255 (30%), Gaps = 7/255 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A+R L + F++ S + IGV+ V+ + S N + V+G
Sbjct: 3 SFKIAFRNLIRMGRRTFLT--SSLIAIGVVFVVLYITYAESFKNSMIAQITDSVMGELQI 60
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + + L + S G + S +
Sbjct: 61 HKKGYVSSLDSLPLDKNLGPKVVKKIEEKLNSMPEVYSYSERLKFGGMISNYTDSTNIRL 120
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+S + ++ IS G + I V G +
Sbjct: 121 NGIDSEMEAKTLPLLKERLTGHLPKEGEIVIPELISKGLHLKIGDVVVLVATNKNGSMNA 180
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN-AVSGIEVFVKDPDAIEKTHENIV- 245
+ Y++L++A+ ++ ++ I + +K+PD ++K ++ ++
Sbjct: 181 KTLKISGIVGIISGPGGRDGYINLKDARKLLRIKKPEINEIVIKLKNPDMLQKANKELIK 240
Query: 246 ---RILGNGVVVIDW 257
+ + V W
Sbjct: 241 FVKKNKKPKLEVHTW 255
>gi|121636914|ref|YP_977137.1| putative adhesion component transport transmembrane protein ABC
transporter [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224989386|ref|YP_002644073.1| putative adhesion component transport transmembrane protein ABC
transporter [Mycobacterium bovis BCG str. Tokyo 172]
gi|260204204|ref|ZP_05771695.1| putative adhesion component transport transmembrane protein ABC
transporter [Mycobacterium tuberculosis K85]
gi|289573625|ref|ZP_06453852.1| adhesion component transport transmembrane protein ABC transporter
[Mycobacterium tuberculosis K85]
gi|121492561|emb|CAL71029.1| Probable adhesion component transport transmembrane protein ABC
transporter [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224772499|dbj|BAH25305.1| putative adhesion component transport transmembrane protein ABC
transporter [Mycobacterium bovis BCG str. Tokyo 172]
gi|289538056|gb|EFD42634.1| adhesion component transport transmembrane protein ABC transporter
[Mycobacterium tuberculosis K85]
Length = 855
Score = 43.2 bits (99), Expect = 0.034, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 75/248 (30%), Gaps = 18/248 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
AWR L + +G+ +GV +IV + V + +
Sbjct: 13 WRTAWRRLRQRP------FQYILLVLGIALGVA-MIVAIDVSSNSAQRAFDLSAAAITGK 65
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ P + G GL + +
Sbjct: 66 STHRLVSGPAGVDQQLYVDLRRHGYDFSAPVIEGYVLARGLGNRAMQFMGTDPFAESAFR 125
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
++ + R GV++ + +A+ G+++GD+I + G
Sbjct: 126 SPLWSNQNIAELGGFLTRPNGVVLSRQVAQKYGLAVGDRIALQ-------VKGAPTTVTL 178
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+L + ++ + AQ F++ +S I++ +KD E T I + L
Sbjct: 179 VGLLTPADEVSNQKLSDLIIADISTAQELFHMPGRLSHIDLIIKD----EATATRIQQRL 234
Query: 249 GNGVVVID 256
GV +
Sbjct: 235 PAGVRMET 242
>gi|260062292|ref|YP_003195372.1| ABC-type transport system [Robiginitalea biformata HTCC2501]
gi|88783854|gb|EAR15025.1| ABC-type transport system [Robiginitalea biformata HTCC2501]
Length = 420
Score = 43.2 bits (99), Expect = 0.034, Method: Composition-based stats.
Identities = 36/281 (12%), Positives = 76/281 (27%), Gaps = 30/281 (10%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
+ + +A +L + K+ + + +GV G+ A I ++S M G + VL
Sbjct: 5 KLILGIARTHLLTKMKS------TVTASLGVTFGIGAYITLVSFMTGLNGMLDSLVLNQT 58
Query: 66 GHVVIQQKYYPLVDYQF---------------------IANRLDFIPDVIKVLPFVSGQA 104
H+ + + P + +P + +
Sbjct: 59 PHIHLYDELEPTAVQPIERSLEFSGDLLKIRSVRPKPGQLKIHNALPILETLREDPRVLG 118
Query: 105 FVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISI 164
L + + + N+ + G + L
Sbjct: 119 ATPQLVANIFYLSGSLDLGGVLIGVDIMEETRLSNMGDYIVEGSPEALRNTENGILLGIG 178
Query: 165 GDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NA 223
+ LS V ++G+++ + DN + + Q N
Sbjct: 179 LAEKLSLSVGDRVQVATTEGGVFPLKIVGLYQSGLAEVDNARSFAQIGTVQRILGKPVNY 238
Query: 224 VSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIF 264
++ I V ++D G V D Q+ F
Sbjct: 239 LTDINVKLQDIGLAVPMAREFESQFG--VKARDIQEANAQF 277
>gi|215445135|ref|ZP_03431887.1| putative adhesion component transport transmembrane protein ABC
transporter [Mycobacterium tuberculosis T85]
gi|289757070|ref|ZP_06516448.1| adhesion component transport transmembrane protein ABC transporter
[Mycobacterium tuberculosis T85]
gi|289712634|gb|EFD76646.1| adhesion component transport transmembrane protein ABC transporter
[Mycobacterium tuberculosis T85]
gi|326904787|gb|EGE51720.1| adhesion component transport transmembrane protein ABC transporter
[Mycobacterium tuberculosis W-148]
Length = 855
Score = 43.2 bits (99), Expect = 0.035, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 75/248 (30%), Gaps = 18/248 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
AWR L + +G+ +GV +IV + V + +
Sbjct: 13 WRTAWRRLRQRP------FQYILLVLGIALGVA-MIVAIDVSSNSAQRAFDLSAAAITGK 65
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ P + G GL + +
Sbjct: 66 STHRLVSGPAGVDQQLYVDLRRHGYDFSAPVIEGYVLARGLGNRAMQFMGTDPFAESAFR 125
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
++ + R GV++ + +A+ G+++GD+I + G
Sbjct: 126 SPLWSNQNIAELGGFLTRPNGVVLSRQVAQKYGLAVGDRIALQ-------VKGAPTTVTL 178
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+L + ++ + AQ F++ +S I++ +KD E T I + L
Sbjct: 179 VGLLTPADEVSNQKLSDLIIADISTAQELFHMPGRLSHIDLIIKD----EATATRIQQRL 234
Query: 249 GNGVVVID 256
GV +
Sbjct: 235 PAGVRMET 242
>gi|194099234|ref|YP_002002325.1| putative ABC transporter, ATP-binding protein [Neisseria
gonorrhoeae NCCP11945]
gi|239999516|ref|ZP_04719440.1| putative ABC transporter, ATP-binding protein [Neisseria
gonorrhoeae 35/02]
gi|240014693|ref|ZP_04721606.1| putative ABC transporter, ATP-binding protein [Neisseria
gonorrhoeae DGI18]
gi|240017140|ref|ZP_04723680.1| putative ABC transporter, ATP-binding protein [Neisseria
gonorrhoeae FA6140]
gi|240113433|ref|ZP_04727923.1| putative ABC transporter, ATP-binding protein [Neisseria
gonorrhoeae MS11]
gi|240118505|ref|ZP_04732567.1| putative ABC transporter, ATP-binding protein [Neisseria
gonorrhoeae PID1]
gi|240121214|ref|ZP_04734176.1| putative ABC transporter, ATP-binding protein [Neisseria
gonorrhoeae PID24-1]
gi|240128714|ref|ZP_04741375.1| putative ABC transporter, ATP-binding protein [Neisseria
gonorrhoeae SK-93-1035]
gi|260439966|ref|ZP_05793782.1| putative ABC transporter, ATP-binding protein [Neisseria
gonorrhoeae DGI2]
gi|268595327|ref|ZP_06129494.1| macrolide export ATP-binding/permease macB [Neisseria gonorrhoeae
35/02]
gi|268599507|ref|ZP_06133674.1| macrolide export ATP-binding/permease macB [Neisseria gonorrhoeae
MS11]
gi|268604214|ref|ZP_06138381.1| macrolide export ATP-binding/permease macB [Neisseria gonorrhoeae
PID1]
gi|268687100|ref|ZP_06153962.1| macrolide export ATP-binding/permease macB [Neisseria gonorrhoeae
SK-93-1035]
gi|291043252|ref|ZP_06568975.1| macrolide export ATP-binding/permease macB [Neisseria gonorrhoeae
DGI2]
gi|293398572|ref|ZP_06642750.1| ABC transporter, ATP-binding protein [Neisseria gonorrhoeae F62]
gi|193934524|gb|ACF30348.1| putative ABC transporter, ATP-binding protein [Neisseria
gonorrhoeae NCCP11945]
gi|268548716|gb|EEZ44134.1| macrolide export ATP-binding/permease macB [Neisseria gonorrhoeae
35/02]
gi|268583638|gb|EEZ48314.1| macrolide export ATP-binding/permease macB [Neisseria gonorrhoeae
MS11]
gi|268588345|gb|EEZ53021.1| macrolide export ATP-binding/permease macB [Neisseria gonorrhoeae
PID1]
gi|268627384|gb|EEZ59784.1| macrolide export ATP-binding/permease macB [Neisseria gonorrhoeae
SK-93-1035]
gi|291012858|gb|EFE04841.1| macrolide export ATP-binding/permease macB [Neisseria gonorrhoeae
DGI2]
gi|291611043|gb|EFF40140.1| ABC transporter, ATP-binding protein [Neisseria gonorrhoeae F62]
gi|317164764|gb|ADV08305.1| putative ABC transporter, ATP-binding protein [Neisseria
gonorrhoeae TCDC-NG08107]
Length = 644
Score = 43.2 bits (99), Expect = 0.035, Method: Composition-based stats.
Identities = 30/231 (12%), Positives = 75/231 (32%), Gaps = 5/231 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG ++ +++ + + + + D + +
Sbjct: 269 SLLTMLGIIIGIASVVSVVALGNGSQKKILEDISSMGTNTISIFPGRGFGDRRSGKIKTL 328
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I D + + SSGG+ + + + G
Sbjct: 329 TIDDAKIIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFD 388
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ +D + + R + TV+G+ + + N V
Sbjct: 389 ENDVKEDAQVVVIDQNVKDKLFADSDPLGKTI--LFRKRPLTVIGVMKKDENAFGNSDVL 446
Query: 209 MSLQEAQLYFNL---ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
M + E+ + I V +KD + + +L D
Sbjct: 447 MLWSPYTTVMHQITGESHTNSITVKIKDNANTRVAEKGLAELLKARHGTED 497
>gi|59801781|ref|YP_208493.1| putative ABC transporter, ATP-binding protein [Neisseria
gonorrhoeae FA 1090]
gi|240116221|ref|ZP_04730283.1| putative ABC transporter, ATP-binding protein [Neisseria
gonorrhoeae PID18]
gi|240124048|ref|ZP_04737004.1| putative ABC transporter, ATP-binding protein [Neisseria
gonorrhoeae PID332]
gi|240126331|ref|ZP_04739217.1| putative ABC transporter, ATP-binding protein [Neisseria
gonorrhoeae SK-92-679]
gi|268601883|ref|ZP_06136050.1| macrolide export ATP-binding/permease macB [Neisseria gonorrhoeae
PID18]
gi|268682673|ref|ZP_06149535.1| macrolide export ATP-binding/permease macB [Neisseria gonorrhoeae
PID332]
gi|268684916|ref|ZP_06151778.1| macrolide export ATP-binding/permease macB [Neisseria gonorrhoeae
SK-92-679]
gi|75355670|sp|Q5F6V6|MACB_NEIG1 RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|59718676|gb|AAW90081.1| putative ABC transporter, ATP-binding protein [Neisseria
gonorrhoeae FA 1090]
gi|268586014|gb|EEZ50690.1| macrolide export ATP-binding/permease macB [Neisseria gonorrhoeae
PID18]
gi|268622957|gb|EEZ55357.1| macrolide export ATP-binding/permease macB [Neisseria gonorrhoeae
PID332]
gi|268625200|gb|EEZ57600.1| macrolide export ATP-binding/permease macB [Neisseria gonorrhoeae
SK-92-679]
Length = 644
Score = 43.2 bits (99), Expect = 0.035, Method: Composition-based stats.
Identities = 30/231 (12%), Positives = 75/231 (32%), Gaps = 5/231 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG ++ +++ + + + + D + +
Sbjct: 269 SLLTMLGIIIGIASVVSVVALGNGSQKKILEDISSMGTNTISIFPGRGFGDRRSGKIKTL 328
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I D + + SSGG+ + + + G
Sbjct: 329 TIDDAKIIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFD 388
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ +D + + R + TV+G+ + + N V
Sbjct: 389 ENDVKEDAQVVVIDQNVKDKLFADSDPLGKTI--LFRKRPLTVIGVMKKDENAFGNSDVL 446
Query: 209 MSLQEAQLYFNL---ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
M + E+ + I V +KD + + +L D
Sbjct: 447 MLWSPYTTVMHQITGESHTNSITVKIKDNANTRVAEKGLAELLKARHGTED 497
>gi|330970198|gb|EGH70264.1| ABC transporter [Pseudomonas syringae pv. aceris str. M302273PT]
Length = 478
Score = 43.2 bits (99), Expect = 0.035, Method: Composition-based stats.
Identities = 38/252 (15%), Positives = 95/252 (37%), Gaps = 10/252 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++AW L S+R + ++ +G++IG+ +++ ++++ G + ++K + I +
Sbjct: 87 AFVMAWVALISHRMR------TLLTMLGIIIGITSVVSIVAIGEGAKRYVLKDIQAIGSN 140
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + + + + DV + + + ++ S
Sbjct: 141 TIEVFPGSDFGDTKSMDIQTLALSDVAALSSEYYIDSATPNIGRNLLVRYRNIDVSATVS 200
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ S+ + G G + A+ + I +I + P D + + +
Sbjct: 201 GVSPSYFQVRGTKMGLG-VGFNKDDARRQAQVVVIDHNTRIRLFGPKVDPLGQVILVGNL 259
Query: 188 SYTVLGMFRMRFPDYDNG---MVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
TV+G+ + +D ++M + A + + GI V VKD + +N+
Sbjct: 260 PCTVIGVTENKKNIFDTSKNLNIWMPYETASGRLLGQTYLDGITVRVKDGQPSKVVEDNV 319
Query: 245 VRILGNGVVVID 256
++L D
Sbjct: 320 NKLLQKRHGTKD 331
>gi|261493908|ref|ZP_05990418.1| ABC superfamily ATP binding cassette transporter, ABC/membrane
protein [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|261495799|ref|ZP_05992234.1| ABC superfamily ATP binding cassette transporter, ABC/membrane
protein [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261308533|gb|EEY09801.1| ABC superfamily ATP binding cassette transporter, ABC/membrane
protein [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261310441|gb|EEY11634.1| ABC superfamily ATP binding cassette transporter, ABC/membrane
protein [Mannheimia haemolytica serotype A2 str. BOVINE]
Length = 640
Score = 43.2 bits (99), Expect = 0.035, Method: Composition-based stats.
Identities = 19/241 (7%), Positives = 75/241 (31%), Gaps = 7/241 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + +++ + ++ +G++IG+ ++I V+++ G ++ ++ + + +
Sbjct: 252 SFKMATSAIMAHKMR------AILTMLGIIIGITSVISVVALGRGSQQQILSNINNLGTN 305
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + + I D + + ++ + + +
Sbjct: 306 TMDIMNGTGFGDRRANLTKNLTISDALMLGRQSYVESTTPSSNVSATLIYGNTAVTGSVR 365
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ F G + + K L+ + + + +
Sbjct: 366 GVGEQFIDVKGLKLISGRFFSAEEVKNVAQIIVIDPNTQKDLGLTEPVEGKTILVDKKPL 425
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ + + + ++ + + + V +KD + ++I +
Sbjct: 426 QIIGVAQ-QSNNMNQSSLTLWAPYTTIMQRISGAKQIDSLTVKIKDDIESQTAEKSITEL 484
Query: 248 L 248
L
Sbjct: 485 L 485
>gi|289582576|ref|YP_003481042.1| hypothetical protein Nmag_2927 [Natrialba magadii ATCC 43099]
gi|289532129|gb|ADD06480.1| protein of unknown function DUF214 [Natrialba magadii ATCC 43099]
Length = 409
Score = 43.2 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDM 57
+ ++WR + S++ S ++ IGV+IG+ A+I M + +GF E +
Sbjct: 6 SLRISWRSITSHKLR------STLTTIGVIIGIAAVITFMVLGSGFSESI 49
>gi|219669739|ref|YP_002460174.1| ABC transporter [Desulfitobacterium hafniense DCB-2]
gi|219539999|gb|ACL21738.1| ABC transporter related [Desulfitobacterium hafniense DCB-2]
Length = 779
Score = 43.2 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +++R L++ + F++ + S IG+ IG+ V++S+ GFR ++ +
Sbjct: 246 ALNLSFRNLWTKKGRTFLT--ALASSIGI-IGIA---VILSLSTGFRSEIDEFQF 294
>gi|222152900|ref|YP_002562077.1| permease [Streptococcus uberis 0140J]
gi|222113713|emb|CAR41671.1| putative permease [Streptococcus uberis 0140J]
Length = 407
Score = 43.2 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 40/262 (15%), Positives = 86/262 (32%), Gaps = 21/262 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A ++ ++ S ++ +G++IGV A++++M + N + + +
Sbjct: 4 WKFALSSIWGHKLR------SLLTMLGIIIGVAAVVIIMGLGNSMKNSVTNSFSSKQKEI 57
Query: 69 VIQQKYYPLVDYQFIANRLDFIP---------DVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
I K + F D ++K + + F + SS S +
Sbjct: 58 RIYYKDKTEEENPFGIFGTDDNKRLVKHEWLEHIVKSIDGIDSYYFTNNTSSTISFGKRK 117
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ ++ F N+ + ++ D++ Y
Sbjct: 118 MKDVNITGVSKDYFKIKKYNIVAGRTLNDQDYRNFSRIIFIDTALSDELFGNKQYEKALN 177
Query: 180 MGMGIRSKSYTVLGMFRMR-----FPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
+ ++ K Y V+G+++ G M+ + FN+ N V I V V+D
Sbjct: 178 KVVSLKGKDYLVVGVYKTDESAISMTGQIMGGAVMANTQVSSEFNV-NEVGAIFVHVQDV 236
Query: 235 DAIEKTHENIVRILGNGVVVID 256
+ R+L V D
Sbjct: 237 KESIPLGKEAARMLTELSHVKD 258
>gi|320160175|ref|YP_004173399.1| putative ABC transporter permease protein [Anaerolinea
thermophila UNI-1]
gi|319994028|dbj|BAJ62799.1| putative ABC transporter permease protein [Anaerolinea
thermophila UNI-1]
Length = 408
Score = 43.2 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
A + L +N+ S ++ +G++IGV A+I +++V NG + + + GI +++
Sbjct: 10 ALQSLTANKLR------SALTILGIVIGVAAVIAMLAVGNGAQAAITGSISGIGTNLLF 62
>gi|302036448|ref|YP_003796770.1| putative macrolide ABC transporter permease [Candidatus
Nitrospira defluvii]
gi|300604512|emb|CBK40844.1| ABC transporter, permease component, putative Macrolide export
permease protein [Candidatus Nitrospira defluvii]
Length = 411
Score = 43.2 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNG 52
M F V+ A R L NR + ++ +G++IGV A+I ++S+ G
Sbjct: 1 MPAFILLTVMTALRILSRNRLR------AGLTMLGIVIGVGAVIAMVSIGQG 46
>gi|215410586|ref|ZP_03419394.1| putative adhesion component transport transmembrane protein ABC
transporter [Mycobacterium tuberculosis 94_M4241A]
gi|298524481|ref|ZP_07011890.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|298494275|gb|EFI29569.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
Length = 855
Score = 43.2 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 75/248 (30%), Gaps = 18/248 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
AWR L + +G+ +GV +IV + V + +
Sbjct: 13 WRTAWRRLRQRP------FQYILLVLGIALGVA-MIVAIDVSSNSAQRAFDLSAAAITGK 65
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ P + G GL + +
Sbjct: 66 STHRLVSGPAGVDQQLYVDLRRHGYDFSAPVIEGYVLARGLGNRAMQFMGTDPFAESAFR 125
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
++ + R GV++ + +A+ G+++GD+I + G
Sbjct: 126 SPLWSNQNIAELGGFLTRPNGVVLSRQVAQKYGLAVGDRIALQ-------LKGAPTTVTL 178
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+L + ++ + AQ F++ +S I++ +KD E T I + L
Sbjct: 179 VGLLTPADEVSNQKLSDLIIADISTAQELFHMPGRLSHIDLIIKD----EATATRIQQRL 234
Query: 249 GNGVVVID 256
GV +
Sbjct: 235 PAGVRMET 242
>gi|312877664|ref|ZP_07737620.1| protein of unknown function DUF214 [Caldicellulosiruptor
lactoaceticus 6A]
gi|311795557|gb|EFR11930.1| protein of unknown function DUF214 [Caldicellulosiruptor
lactoaceticus 6A]
Length = 419
Score = 43.2 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 32/297 (10%), Positives = 82/297 (27%), Gaps = 39/297 (13%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M +IV + + + ++ +G+ IG + L VV+S+ + F++ +IK
Sbjct: 1 MKFSDILSLIVT--NIKRRKLR------TVLTVMGIFIGSLGLFVVVSISSSFKDYIIKG 52
Query: 61 VLGINGHVVIQQKYYPL----------VDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLS 110
+ + VI + +L+ + V ++PF +
Sbjct: 53 ISSLGNADVIYVMPNRNSGYSLEKLKTEIHDKDIKKLEKLEHVKFIIPFYFSNGTLKYKK 112
Query: 111 SGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLAR------------ 158
G+ L + F ++ + + I
Sbjct: 113 YEGTVTLAATSVRNFSKKYGLQFGKYPKDNPPNACVLGHGIAKLIANPSRAGFADESEVK 172
Query: 159 --NLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYM-SLQEAQ 215
+ + + S F M + + Q
Sbjct: 173 KLVNKKIKIEVKRLNQAGEEEVKEFSFKISGIAKSDFNFDSTIILPLEAMSKIEDWRFYQ 232
Query: 216 LYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQI---FFSCYE 269
F ++ + + V + P I + + + +++ ++ F + +
Sbjct: 233 QDFIKKSGYTYLFVVLDSPSHIPAVEKFLAQ---EKYYYTSIKEQQEVIEKFLNAVK 286
>gi|255322320|ref|ZP_05363466.1| macrolide export ATP-binding/permease protein MacB [Campylobacter
showae RM3277]
gi|255300693|gb|EET79964.1| macrolide export ATP-binding/permease protein MacB [Campylobacter
showae RM3277]
Length = 645
Score = 43.2 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 32/256 (12%), Positives = 79/256 (30%), Gaps = 7/256 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++ + S++ S ++ +G++IG+ ++I V+++ G +E ++ + GI +
Sbjct: 255 SFKMSINAILSHKLR------SALTMLGIIIGITSVICVVALGQGSQEQILSDIRGIGTN 308
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + R + D + + S+ G+ +++
Sbjct: 309 TIDILNGKGFGDMRSERVRNLTVSDATMLSKQDYLDSVTPNASASGTLTYGNKSASATIK 368
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK-INILSPYGDVTPMGMGIRS 186
G + + + + + T +
Sbjct: 369 GGSEESLNVMGYKVEAGRVFTAQEVAESASVIVIDQPTREQFFADEDPLGKTVLFNKRPF 428
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
K V+ F D + + + +S I V VKD + +++
Sbjct: 429 KIIGVVAKNDNMFADSSTLRTFSTYTAVINKLTGDRHLSSITVKVKDNVNAQIAEQSLTE 488
Query: 247 ILGNGVVVIDWQQRYQ 262
IL D+ R
Sbjct: 489 ILTAKHGKKDFFTRNS 504
>gi|11496870|ref|NP_045651.1| hypothetical protein BBJ27 [Borrelia burgdorferi B31]
gi|2690214|gb|AAC66122.1| predicted coding region BBJ27 [Borrelia burgdorferi B31]
Length = 411
Score = 43.2 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 51/270 (18%), Positives = 99/270 (36%), Gaps = 21/270 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A+ +F + + + I + + V+ L+V + MN RE M K + +GH+
Sbjct: 4 FKLAFYNIFRDLRR------TIILSLLLASSVVFLLVFVGYMNFSREGMEKSFVSSSGHI 57
Query: 69 VIQQKYYPLVDYQFIANRL-----------DFIPDVIKVLPFVSGQAFVSGLSSGGSGVL 117
I ++ Y + + N L + I ++ F L + +
Sbjct: 58 QIAKENYFNPKFSNLKNGLLLEEKDINLIRNEIDSYDELQSTNLIVNFDGLLGNSSTSNP 117
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
V + D + +S S G ++G +LA + GI + N
Sbjct: 118 VFAFAYEDPDIITSSLSLLEGEPIFHDSNAGEFLLGSNLASSFGIEKITETNSDLTLMTN 177
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
+G G+ ++ V G+ + F DN +++ + F E I+VF+KD +
Sbjct: 178 -LLGRGLNFQNIKVAGIIKFPFSTADNIFAITTIKTLKDLFAFEGGAHVIQVFLKDSSTL 236
Query: 238 EKTHENI---VRILGNGVVVIDWQQRYQIF 264
E + + + G DW + F
Sbjct: 237 ETFKKKLDNFKKNKGISFDYNDWFEINPYF 266
>gi|15608127|ref|NP_215502.1| adhesion component transport transmembrane protein ABC transporter
[Mycobacterium tuberculosis H37Rv]
gi|148660768|ref|YP_001282291.1| adhesion component ABC transporter permease protein [Mycobacterium
tuberculosis H37Ra]
gi|148822196|ref|YP_001286950.1| adhesion ABC transporter transmembrane protein [Mycobacterium
tuberculosis F11]
gi|253799985|ref|YP_003032986.1| hypothetical protein TBMG_03002 [Mycobacterium tuberculosis KZN
1435]
gi|289555231|ref|ZP_06444441.1| adhesion component transport transmembrane protein ABC transporter
[Mycobacterium tuberculosis KZN 605]
gi|297633512|ref|ZP_06951292.1| hypothetical protein MtubK4_05288 [Mycobacterium tuberculosis KZN
4207]
gi|297730497|ref|ZP_06959615.1| hypothetical protein MtubKR_05368 [Mycobacterium tuberculosis KZN
R506]
gi|306971227|ref|ZP_07483888.1| adhesion component transport transmembrane protein ABC transporter
[Mycobacterium tuberculosis SUMu010]
gi|313657826|ref|ZP_07814706.1| hypothetical protein MtubKV_05368 [Mycobacterium tuberculosis KZN
V2475]
gi|3261539|emb|CAA17586.1| PROBABLE ADHESION COMPONENT TRANSPORT TRANSMEMBRANE PROTEIN ABC
TRANSPORTER [Mycobacterium tuberculosis H37Rv]
gi|148504920|gb|ABQ72729.1| adhesion component ABC transporter permease protein [Mycobacterium
tuberculosis H37Ra]
gi|148720723|gb|ABR05348.1| hypothetical adhesion component transport transmembrane protein ABC
transporter [Mycobacterium tuberculosis F11]
gi|253321488|gb|ACT26091.1| adhesion component transport transmembrane protein ABC transporter
[Mycobacterium tuberculosis KZN 1435]
gi|289439863|gb|EFD22356.1| adhesion component transport transmembrane protein ABC transporter
[Mycobacterium tuberculosis KZN 605]
gi|308359221|gb|EFP48072.1| adhesion component transport transmembrane protein ABC transporter
[Mycobacterium tuberculosis SUMu010]
gi|328459727|gb|AEB05150.1| adhesion component transport transmembrane protein ABC transporter
[Mycobacterium tuberculosis KZN 4207]
Length = 855
Score = 43.2 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 75/248 (30%), Gaps = 18/248 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
AWR L + +G+ +GV +IV + V + +
Sbjct: 13 WRTAWRRLRQRP------FQYILLVLGIALGVA-MIVAIDVSSNSAQRAFDLSAAAITGK 65
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ P + G GL + +
Sbjct: 66 STHRLVSGPAGVDQQLYVDLRRHGYDFSAPVIEGYVLARGLGNRAMQFMGTDPFAESAFR 125
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
++ + R GV++ + +A+ G+++GD+I + G
Sbjct: 126 SPLWSNQNIAELGGFLTRPNGVVLSRQVAQKYGLAVGDRIALQ-------VKGAPTTVTL 178
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+L + ++ + AQ F++ +S I++ +KD E T I + L
Sbjct: 179 VGLLTPADEVSNQKLSDLIIADISTAQELFHMPGRLSHIDLIIKD----EATATRIQQRL 234
Query: 249 GNGVVVID 256
GV +
Sbjct: 235 PAGVRMET 242
>gi|296314918|ref|ZP_06864859.1| macrolide export ATP-binding/permease protein MacB [Neisseria
polysaccharea ATCC 43768]
gi|296838104|gb|EFH22042.1| macrolide export ATP-binding/permease protein MacB [Neisseria
polysaccharea ATCC 43768]
Length = 644
Score = 43.2 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 31/231 (13%), Positives = 76/231 (32%), Gaps = 5/231 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG ++ +++ + + + + D + R
Sbjct: 269 SLLTMLGIIIGIASVVSVVALGNGSQKKILEDISSMGTNTISIFPGRGFGDRRSGKIRTL 328
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I D + + SSGG+ + + + G
Sbjct: 329 TIDDAKIIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFD 388
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ +D + + R + TV+G+ + + N V
Sbjct: 389 ENDVKEDAQVVVIDQNVKDKLFADSDPLGKTI--LFRKRPLTVIGVMKKDENAFGNSDVL 446
Query: 209 MSLQEAQLYFNL---ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
M + E+ + I V +KD + + + +L D
Sbjct: 447 MLWSPYTTVMHQITGESHTNSITVKIKDDANTQVAEKGLTELLKARHGTED 497
>gi|218294748|ref|ZP_03495602.1| protein of unknown function DUF214 [Thermus aquaticus Y51MC23]
gi|218244656|gb|EED11180.1| protein of unknown function DUF214 [Thermus aquaticus Y51MC23]
Length = 342
Score = 43.2 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 41/227 (18%), Positives = 75/227 (33%), Gaps = 25/227 (11%)
Query: 40 VMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPF 99
+ L+ +S+ NGF + +++ L H+V+ L P+V + PF
Sbjct: 1 MAVLLAALSLTNGFTDGLVRATLKAYPHLVLFSFG-------EELPPLLPHPEVEQSAPF 53
Query: 100 VSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARN 159
+ +A + + GG G V + + G G + + L
Sbjct: 54 AATKALLVRPAEGGRGAGVDFATLVGLGEGGEALYPELGLKLEPGGIYLGAALVQTL--- 110
Query: 160 LGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFN 219
+ P + M VLG FR D+G ++ L+ +
Sbjct: 111 ----------GVYPGDTLLAMSATQERVRLRVLGSFRTGNFLLDSGYAFVDLKTVEALAG 160
Query: 220 LENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFS 266
L+ G +V +KDP ++ E + G WQ +
Sbjct: 161 LK--AQGYQVRLKDPWRAKEVGEALA---GTRFFPQAWQDTQRTLLE 202
>gi|221195613|ref|ZP_03568667.1| ABC transporter, permease protein [Atopobium rimae ATCC 49626]
gi|221184379|gb|EEE16772.1| ABC transporter, permease protein [Atopobium rimae ATCC 49626]
Length = 1138
Score = 43.2 bits (99), Expect = 0.038, Method: Composition-based stats.
Identities = 30/262 (11%), Positives = 57/262 (21%), Gaps = 11/262 (4%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
F V+ R LF ++ F+++ G+ L+V V N D+I
Sbjct: 743 SFSWKVSARNLFRFKRRLFMTVI------GIAGCTALLLVAFGVQNSI-NDVIDAQWPGL 795
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
H + + I + + + V +S
Sbjct: 796 FHYDYIVGMKKEATTDDVHAVEERITAATQSASEKVSSDDFTLVWRENILVSSDTLSKEH 855
Query: 126 FSYLQNSFSR---FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + N DR + + K + VT
Sbjct: 856 AVSVIEMSPLETDRFKNAVVLRDRLSQKPLEFTDDSVVLSEKIAKKLNVHVGDRVTVYKQ 915
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + YM + + + + P E +
Sbjct: 916 DRIGNVADAGKSLTVTGITENYAWHYMYVGKNAEKSLEPRENASYALLFSAPKD-EAIRQ 974
Query: 243 NIVRILGNGVVVIDWQQRYQIF 264
I L V
Sbjct: 975 QIGDELSENSQVASVSDINTTI 996
>gi|188535128|ref|YP_001908925.1| Macrolide-specific ABC-type efflux carrier [Erwinia tasmaniensis
Et1/99]
gi|188030170|emb|CAO98056.1| Macrolide-specific ABC-type efflux carrier [Erwinia tasmaniensis
Et1/99]
Length = 643
Score = 43.2 bits (99), Expect = 0.038, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
V +AWR L +R AF +S +G++IG+ +++ M+V G R+ ++
Sbjct: 253 SVRMAWRSLLGHRMRAF------LSMLGIIIGISSVVSSMAVGEGARQAIMS 298
>gi|240081222|ref|ZP_04725765.1| putative ABC transporter, ATP-binding protein [Neisseria
gonorrhoeae FA19]
gi|254494232|ref|ZP_05107403.1| macrolide export ATP-binding/permease macB [Neisseria gonorrhoeae
1291]
gi|268597333|ref|ZP_06131500.1| macrolide export ATP-binding/permease macB [Neisseria gonorrhoeae
FA19]
gi|75350657|sp|Q5MK06|MACB_NEIGO RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|56385102|gb|AAV85982.1| MacB [Neisseria gonorrhoeae]
gi|226513272|gb|EEH62617.1| macrolide export ATP-binding/permease macB [Neisseria gonorrhoeae
1291]
gi|268551121|gb|EEZ46140.1| macrolide export ATP-binding/permease macB [Neisseria gonorrhoeae
FA19]
Length = 644
Score = 43.2 bits (99), Expect = 0.038, Method: Composition-based stats.
Identities = 30/231 (12%), Positives = 75/231 (32%), Gaps = 5/231 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG ++ +++ + + + + D + +
Sbjct: 269 SLLTMLGIIIGIASVVSVVALGNGSQKKILEDISSMGTNTISIFPGRGFGDRRSGKIKTL 328
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I D + + SSGG+ + + + G
Sbjct: 329 TIDDAKIIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFD 388
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ +D + + R + TV+G+ + + N V
Sbjct: 389 ENDVKEDAQVVVIDQNVKDKLFADSDPLGKTI--LFRKRPLTVIGVMKKDENAFGNSDVL 446
Query: 209 MSLQEAQLYFNL---ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
M + E+ + I V +KD + + +L D
Sbjct: 447 MLWSPYTTVMHQITGESHTNSITVKIKDNANTRVAEKGLAELLKARHGTED 497
>gi|254231284|ref|ZP_04924611.1| hypothetical protein TBCG_00976 [Mycobacterium tuberculosis C]
gi|124600343|gb|EAY59353.1| hypothetical protein TBCG_00976 [Mycobacterium tuberculosis C]
Length = 872
Score = 43.2 bits (99), Expect = 0.038, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 75/248 (30%), Gaps = 18/248 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
AWR L + +G+ +GV +IV + V + +
Sbjct: 13 WRTAWRRLRQRP------FQYILLVLGIALGVA-MIVAIDVSSNSAQRAFDLSAAAITGK 65
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ P + G GL + +
Sbjct: 66 STHRLVSGPAGVDQQLYVDLRRHGYDFSAPVIEGYVLARGLGNRAMQFMGTDPFAESAFR 125
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
++ + R GV++ + +A+ G+++GD+I + G
Sbjct: 126 SPLWSNQNIAELGGFLTRPNGVVLSRQVAQKYGLAVGDRIALQ-------VKGAPTTVTL 178
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+L + ++ + AQ F++ +S I++ +KD E T I + L
Sbjct: 179 VGLLTPADEVSNQKLSDLIIADISTAQELFHMPGRLSHIDLIIKD----EATATRIQQRL 234
Query: 249 GNGVVVID 256
GV +
Sbjct: 235 PAGVRMET 242
>gi|312142676|ref|YP_003994122.1| protein of unknown function DUF214 [Halanaerobium sp.
'sapolanicus']
gi|311903327|gb|ADQ13768.1| protein of unknown function DUF214 [Halanaerobium sp.
'sapolanicus']
Length = 414
Score = 43.2 bits (99), Expect = 0.038, Method: Composition-based stats.
Identities = 41/266 (15%), Positives = 79/266 (29%), Gaps = 22/266 (8%)
Query: 7 FEVIVAWRYLFSNRKNAFI-------SIASFISFIGVMIGVMALIVVMSVMN--GFRE-- 55
F + +A + L +K FI ++ SF+ +MIG+M +S N F
Sbjct: 2 FLIKLALKNLKRRKKRTFIMAVILATAVISFLLLDSLMIGMM----DLSFGNVIDFETPH 57
Query: 56 -DMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
++ ++ + + + + L V +
Sbjct: 58 IEIAQKEFFAEIDEDEEPPLEQAFIPERSMLDELREVEGFRALTSVIDFSATFISGRYDF 117
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
VLVR I F + GV+IGKDLA + IGD +
Sbjct: 118 PVLVRVIDEESFKDVFRHHEHLEKGEFIST-GDSGVVIGKDLAEFFNLDIGDYYTLRFRD 176
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
D + + ++ Q + EN+V+ + + + +
Sbjct: 177 KDNYFSTIEGEIRGIISTP----HPEVNQRTVLIARDQAVERLAVEENSVTQLMLRMDNR 232
Query: 235 DAIEKTHENIVRIL-GNGVVVIDWQQ 259
D + + V ++
Sbjct: 233 DLALDKTDLLAASFADTDFEVRSYRD 258
>gi|89895305|ref|YP_518792.1| hypothetical protein DSY2559 [Desulfitobacterium hafniense Y51]
gi|89334753|dbj|BAE84348.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 791
Score = 43.2 bits (99), Expect = 0.038, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +++R L++ + F++ + S IG+ IG+ V++S+ GFR ++ +
Sbjct: 258 ALNLSFRNLWTKKGRTFLT--ALASSIGI-IGIA---VILSLSTGFRSEIDEFQF 306
>gi|312149937|gb|ADQ29999.1| efflux ABC transporter, permease protein [Borrelia burgdorferi N40]
Length = 409
Score = 43.2 bits (99), Expect = 0.039, Method: Composition-based stats.
Identities = 51/270 (18%), Positives = 99/270 (36%), Gaps = 21/270 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A+ +F + + + I + + V+ L+V + MN RE M K + +GH+
Sbjct: 2 FKLAFYNIFRDLRR------TIILSLLLASSVVFLLVFVGYMNFSREGMEKSFVSSSGHI 55
Query: 69 VIQQKYYPLVDYQFIANRL-----------DFIPDVIKVLPFVSGQAFVSGLSSGGSGVL 117
I ++ Y + + N L + I ++ F L + +
Sbjct: 56 QIAKENYFNPKFSNLKNGLLLEEKDINLIRNEIDSYDELQSTNLIVNFDGLLGNSSTSNP 115
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
V + D + +S S G ++G +LA + GI + N
Sbjct: 116 VFAFAYEDPDIITSSLSLLEGEPIFHDSNAGEFLLGSNLASSFGIEKITETNSDLTLMTN 175
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
+G G+ ++ V G+ + F DN +++ + F E I+VF+KD +
Sbjct: 176 -LLGRGLDFQNIKVAGIIKFPFSTADNIFAITTIKTLKDLFAFEGGAHVIQVFLKDSSTL 234
Query: 238 EKTHENI---VRILGNGVVVIDWQQRYQIF 264
E + + + G DW + F
Sbjct: 235 ETFKKKLDNFKKNKGISFDYNDWFEINPYF 264
>gi|261401016|ref|ZP_05987141.1| macrolide export ATP-binding/permease protein MacB [Neisseria
lactamica ATCC 23970]
gi|269209017|gb|EEZ75472.1| macrolide export ATP-binding/permease protein MacB [Neisseria
lactamica ATCC 23970]
Length = 644
Score = 43.2 bits (99), Expect = 0.039, Method: Composition-based stats.
Identities = 31/231 (13%), Positives = 76/231 (32%), Gaps = 5/231 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG ++ +++ + + + + D + R
Sbjct: 269 SLLTMLGIIIGIASVVSVVALGNGSQKKILEDISSMGTNTISIFPGRGFGDRRSGKIRTL 328
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I D + + SSGG+ + + + G
Sbjct: 329 TIDDAKIIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFD 388
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ +D + + R + TV+G+ + + N V
Sbjct: 389 ENDVKEDAQVVVIDQNVKDKLFADSDPLGKTI--LFRKRPLTVIGVMKKDENAFGNSDVL 446
Query: 209 MSLQEAQLYFNL---ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
M + E+ + I V +KD + + + +L D
Sbjct: 447 MLWSPYTTVMHQITGESHTNSITVKIKDDANTQVAEKGLTELLKARHGTED 497
>gi|52425184|ref|YP_088321.1| hypothetical protein MS1129 [Mannheimia succiniciproducens MBEL55E]
gi|81825545|sp|Q65TH4|MACB_MANSM RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|52307236|gb|AAU37736.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 643
Score = 43.2 bits (99), Expect = 0.039, Method: Composition-based stats.
Identities = 23/221 (10%), Positives = 64/221 (28%), Gaps = 1/221 (0%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQ-FIANRL 87
S ++ +G++IG+ +++ V+++ NG ++ ++ + G+ + + D + L
Sbjct: 268 SLLTMLGIIIGITSVVSVVALGNGSQQKILSNISGLGTNTMTIFNGTGFGDRRAEQMQNL 327
Query: 88 DFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRG 147
+ SSG + ++++ + + G
Sbjct: 328 TVNDANALAKQSYVQNVTPNSSSSGLLIYGNQSFTSTNLKGIGEQYFDVEGMTLKQGRSI 387
Query: 148 KGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMV 207
+ + L K + + R + R + +
Sbjct: 388 TAQEVRDNAQVALLDESSKKSIFPNDNPIDKIVMFAKRPFRIIGVVADRQMGAASSSLNI 447
Query: 208 YMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
Y + I V + D +++ L
Sbjct: 448 YAPYTTVMNKVTGGTKIDSITVKIADNVNTAVAEKSLTEYL 488
>gi|195942351|ref|ZP_03087733.1| hypothetical protein Bbur8_05799 [Borrelia burgdorferi 80a]
gi|224984104|ref|YP_002641405.1| efflux ABC transporter, permease protein [Borrelia burgdorferi
WI91-23]
gi|226315713|ref|YP_002775930.1| efflux ABC transporter, permease protein [Borrelia burgdorferi
29805]
gi|224554298|gb|ACN55687.1| efflux ABC transporter, permease protein [Borrelia burgdorferi
WI91-23]
gi|226201602|gb|ACO38196.1| efflux ABC transporter, permease protein [Borrelia burgdorferi
29805]
Length = 409
Score = 43.2 bits (99), Expect = 0.040, Method: Composition-based stats.
Identities = 51/270 (18%), Positives = 99/270 (36%), Gaps = 21/270 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A+ +F + + + I + + V+ L+V + MN RE M K + +GH+
Sbjct: 2 FKLAFYNIFRDLRR------TIILSLLLASSVVFLLVFVGYMNFSREGMEKSFVSSSGHI 55
Query: 69 VIQQKYYPLVDYQFIANRL-----------DFIPDVIKVLPFVSGQAFVSGLSSGGSGVL 117
I ++ Y + + N L + I ++ F L + +
Sbjct: 56 QIAKENYFNPKFSNLKNGLLLEEKDINLIRNEIDSYDELQSTNLIVNFDGLLGNSSTSNP 115
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
V + D + +S S G ++G +LA + GI + N
Sbjct: 116 VFAFAYEDPDIITSSLSLLEGEPIFHDSNAGEFLLGSNLAASFGIEKITETNSDLTLMTN 175
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
+G G+ ++ V G+ + F DN +++ + F E I+VF+KD +
Sbjct: 176 -LLGRGLNFQNIKVAGIIKFPFSTADNIFAITTIKTLKDLFAFEGGAHVIQVFLKDSSTL 234
Query: 238 EKTHENI---VRILGNGVVVIDWQQRYQIF 264
E + + + G DW + F
Sbjct: 235 ETFKKKLDNFKKNKGISFDYNDWFEINPYF 264
>gi|108763012|ref|YP_632348.1| putative ABC transporter permease [Myxococcus xanthus DK 1622]
gi|108466892|gb|ABF92077.1| putative ABC transporter, permease protein [Myxococcus xanthus DK
1622]
Length = 412
Score = 43.2 bits (99), Expect = 0.040, Method: Composition-based stats.
Identities = 36/282 (12%), Positives = 85/282 (30%), Gaps = 38/282 (13%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A L +NR + ++ +G+ IGV L+ ++ ++ G K++ + +
Sbjct: 17 IAVFSLKANRLR------TVLTTLGIGIGVATLLAIVGIIQGLNTSFHKQLATFGANTMY 70
Query: 71 QQKYYPLVDYQFIANRLDFIPD----------VIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
K+ ++ + R V + +S ++ GG +
Sbjct: 71 VSKWPWMIKGDWWKYRNRKNFTLEQMQRLRTLAPFVTAMSPAVSRLSDVAHGGEQMSTVR 130
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGK---------------DLARNLGISIG 165
I YL S G + +++ I
Sbjct: 131 IQGVTHEYLNISGYEITGGRFLTEADDATTRPVAVVGADVVDGLFPGVSPVGQSIRIDNR 190
Query: 166 DKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVS 225
+ + +G + + F F + + M++++A + E+ ++
Sbjct: 191 TFQVVGTLSRKGKMVGESMDLLVFIPFKTFYSSFGKGRSFEIAMAVEDASQMRSAEDQLT 250
Query: 226 GI--EVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFF 265
GI V P A + N + ++Q +
Sbjct: 251 GIMRRVRSTPPGAEDDFSIN-----RPEAMAQTYEQLTGALY 287
>gi|145631790|ref|ZP_01787550.1| ABC-type transport system, involved in lipoprotein release,
permease component [Haemophilus influenzae R3021]
gi|144982580|gb|EDJ90130.1| ABC-type transport system, involved in lipoprotein release,
permease component [Haemophilus influenzae R3021]
Length = 49
Score = 43.2 bits (99), Expect = 0.040, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMAL 43
++WRY +KN +++ + S IG+ +GV
Sbjct: 4 PFFISWRYQRGKQKNPLVTLIAKFSAIGIALGVAVF 39
>gi|116495291|ref|YP_807025.1| peptide ABC transporter ATPase [Lactobacillus casei ATCC 334]
gi|191638803|ref|YP_001987969.1| hypothetical protein LCABL_20350 [Lactobacillus casei BL23]
gi|227534686|ref|ZP_03964735.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Lactobacillus paracasei subsp. paracasei ATCC 25302]
gi|116105441|gb|ABJ70583.1| ABC-type antimicrobial peptide transport system, ATPase component
[Lactobacillus casei ATCC 334]
gi|190713105|emb|CAQ67111.1| Putative uncharacterized protein [Lactobacillus casei BL23]
gi|227187442|gb|EEI67509.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Lactobacillus paracasei subsp. paracasei ATCC 25302]
gi|327382846|gb|AEA54322.1| ABC transporter protein [Lactobacillus casei LC2W]
gi|327386032|gb|AEA57506.1| ABC transporter related protein [Lactobacillus casei BD-II]
Length = 772
Score = 43.2 bits (99), Expect = 0.040, Method: Composition-based stats.
Identities = 34/256 (13%), Positives = 69/256 (26%), Gaps = 13/256 (5%)
Query: 2 SIFSRFEVIVAWRYLFSNRKNAFIS-IASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+ + +++ + + + F++ AS I IG+ VV+++ +GF++ +
Sbjct: 240 KMSYFTALKLSFTNIMTKKGRTFLTAFASSIGIIGIA-------VVLALSSGFQKQIDNT 292
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
I A+ A +
Sbjct: 293 QAETLAQFPITISTNATSLTAGAADNTKTSTFKTTSTVVAKQSASDKAQHTNKLNQKYID 352
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
N L ++ YG N G I + S + + S V P+
Sbjct: 353 YVNGISKKLTDNIGYTYGTGMNLLRDVNGTIKPVQFSTAKPSSNQTQRGLASASSSVYPV 412
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI--- 237
+ +G V + + + NA+ + VKD +
Sbjct: 413 DREGGTSYLKKNYEVVAGSYPKHDGDVILIVD--RDNSTNINALKNLGFDVKDGQKVKFN 470
Query: 238 EKTHENIVRILGNGVV 253
+ I I N
Sbjct: 471 QIVGTKIKAISNNAYY 486
>gi|306788036|ref|ZP_07426358.1| adhesion component transport transmembrane protein ABC transporter
[Mycobacterium tuberculosis SUMu004]
gi|306967037|ref|ZP_07479698.1| adhesion component transport transmembrane protein ABC transporter
[Mycobacterium tuberculosis SUMu009]
gi|308335330|gb|EFP24181.1| adhesion component transport transmembrane protein ABC transporter
[Mycobacterium tuberculosis SUMu004]
gi|308355267|gb|EFP44118.1| adhesion component transport transmembrane protein ABC transporter
[Mycobacterium tuberculosis SUMu009]
Length = 855
Score = 43.2 bits (99), Expect = 0.040, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 75/248 (30%), Gaps = 18/248 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
AWR L + +G+ +GV +IV + V + +
Sbjct: 13 WRTAWRRLRQRP------FQYILLVLGIALGVA-MIVAIDVSSNSAQRAFDLSAAAITGK 65
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ P + G GL + +
Sbjct: 66 STHRLVSGPAGVDQQLYVDLRRHGYDFSAPVIEGYVLARGLGNRAMQFMGTDPFAESAFR 125
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
++ + R GV++ + +A+ G+++GD+I + G
Sbjct: 126 SPLWSNQNIAELGGFLTRPNGVVLSRQVAQKYGLAVGDRIALQ-------VKGAPTTVTL 178
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+L + ++ + AQ F++ +S I++ +KD E T I + L
Sbjct: 179 VGLLTPADEVSNQKLSDLIIADISTAQELFHMPGRLSHIDLIIKD----EATATRIQQRL 234
Query: 249 GNGVVVID 256
GV +
Sbjct: 235 PAGVRMET 242
>gi|239632170|ref|ZP_04675201.1| ABC-type antimicrobial peptide transport system protein
[Lactobacillus paracasei subsp. paracasei 8700:2]
gi|301066856|ref|YP_003788879.1| antimicrobial peptide ABC transporter ATPase [Lactobacillus casei
str. Zhang]
gi|239526635|gb|EEQ65636.1| ABC-type antimicrobial peptide transport system protein
[Lactobacillus paracasei subsp. paracasei 8700:2]
gi|300439263|gb|ADK19029.1| ABC-type antimicrobial peptide transport system, ATPase component
[Lactobacillus casei str. Zhang]
Length = 772
Score = 43.2 bits (99), Expect = 0.040, Method: Composition-based stats.
Identities = 34/256 (13%), Positives = 69/256 (26%), Gaps = 13/256 (5%)
Query: 2 SIFSRFEVIVAWRYLFSNRKNAFIS-IASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+ + +++ + + + F++ AS I IG+ VV+++ +GF++ +
Sbjct: 240 KMSYFTALKLSFTNIMTKKGRTFLTAFASSIGIIGIA-------VVLALSSGFQKQIDNT 292
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
I A+ A +
Sbjct: 293 QAETLAQFPITISTNATSLTAGAADNTKTSTFKTTSTVVAKQSASDKAQHTNKLNQKYID 352
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
N L ++ YG N G I + S + + S V P+
Sbjct: 353 YVNGISKKLTDNIGYTYGTGMNLLRDVNGTIKPVQFSTAKPSSNQTQRGLASASSSVYPV 412
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI--- 237
+ +G V + + + NA+ + VKD +
Sbjct: 413 DREGGTSYLKKNYEVVAGSYPKHDGDVILIVD--RDNSTNINALKNLGFDVKDGQKVKFN 470
Query: 238 EKTHENIVRILGNGVV 253
+ I I N
Sbjct: 471 QIVGTKIKAISNNAYY 486
>gi|307718697|ref|YP_003874229.1| hypothetical protein STHERM_c10100 [Spirochaeta thermophila DSM
6192]
gi|306532422|gb|ADN01956.1| hypothetical protein STHERM_c10100 [Spirochaeta thermophila DSM
6192]
Length = 398
Score = 43.2 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 25/240 (10%), Positives = 64/240 (26%), Gaps = 6/240 (2%)
Query: 15 YLFSNRKNAFISIA-----SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+++ N + AF+S+ +F+S +G++IGV ++I++ S+ + +++ HV+
Sbjct: 3 FVWENIRLAFLSMMHHKGRTFLSMLGIVIGVASVIMITSLGKSATASVEEQIARAGLHVI 62
Query: 70 IQQKY-YPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ L +
Sbjct: 63 SIFPRLSEKEAVRLAVPDLVDDLSSEFPSIEQGVALQRGQFLVTYGHSSTSATVMGVPAS 122
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ FS + + R +
Sbjct: 123 FASMFSYEAEEGRFFSSGEDTARKQVAVLGSEVAEALFPYTDPIGKYIRIFRDQAKRFRV 182
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
V+ + +++ + VS + VK+ + + + + I L
Sbjct: 183 IGVMKSRSDTVGVSFDTSIFVPYHTYTTRLERTDNVSSYLLVVKEGEDVVELADRIETRL 242
>gi|293367596|ref|ZP_06614249.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus epidermidis M23864:W2(grey)]
gi|291318309|gb|EFE58702.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Staphylococcus epidermidis M23864:W2(grey)]
Length = 373
Score = 43.2 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 24/217 (11%), Positives = 64/217 (29%)
Query: 33 FIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPD 92
IG++IG+ ++I +MS+ NGF++ ++ Y + + N D
Sbjct: 1 MIGIIIGIASVITIMSLGNGFKKSTTEQFNDAGAGKNQASISYMTENMEAPKNNPFKQED 60
Query: 93 VIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVII 152
+ V ++ + + ++ + +
Sbjct: 61 MSVVEQVNGVKSAKVKEDKDSTYSVKITNTHGSSDASLKKVDKLTDVDEGKGFTNDDNEV 120
Query: 153 GKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQ 212
+ +A N + + G G + + ++ + S
Sbjct: 121 LEKVAVIDKKIAKKVFNNQAMGQSIYINGEGFKVVGVSESSEVDESGMPIESLIQIPSKT 180
Query: 213 EAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
+ NL + + V V+ + + + ++L
Sbjct: 181 FNKYMGNLTQGMPQLLVTVEKGSDKKDVGKKVEKVLN 217
>gi|116871779|ref|YP_848560.1| ABC transporter, permease protein, putative [Listeria welshimeri
serovar 6b str. SLCC5334]
gi|116740657|emb|CAK19777.1| ABC transporter, permease protein, putative [Listeria welshimeri
serovar 6b str. SLCC5334]
Length = 388
Score = 43.2 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 33/265 (12%), Positives = 89/265 (33%), Gaps = 14/265 (5%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
MS+F +A + L S + F ++ +G++IGV ++I+++S+ +++ +
Sbjct: 1 MSLFQSV--KLALKQLLSAKFRTF------LTMLGIIIGVFSVILLVSIGEAISKNVSTQ 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + ++V + +F + ++ + + V G
Sbjct: 53 LGDMGSNLVSISFQSDNPNEKFTYKDATSLLKESEIGSPEVMRNMEVRTGDKTATKQVTG 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKI-NILSPYGDVTP 179
I+ S S D + V + + I + G
Sbjct: 113 INEDYVSIKNLELISGRFCSSVDVQYAQKVTVIGSEIAKSYFKNQNPIGKYVQISGARYV 172
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+ ++ K ++ G + + V + ++ + ++ + +V +E+
Sbjct: 173 VIGVLKEKGESLFGSADKKLFIPISSAVRLFKSDSIDLYYIQTQTTE-QVSTT----VEQ 227
Query: 240 THENIVRILGNGVVVIDWQQRYQIF 264
T E + ++ N + Q
Sbjct: 228 TKEKMNQLFPNDKEAYTVVNQQQAL 252
>gi|21674172|ref|NP_662237.1| ABC transporter efflux protein [Chlorobium tepidum TLS]
gi|21647333|gb|AAM72579.1| ABC transporter efflux protein [Chlorobium tepidum TLS]
Length = 421
Score = 43.2 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 36/251 (14%), Positives = 82/251 (32%), Gaps = 20/251 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A + +N+ +F ++ +GV+IG++A+ ++ + +NG + + +
Sbjct: 15 SLNIAVYQIRANKIRSF------LTALGVIIGIVAITMMGTAINGIDIGFDRSLAMLGYD 68
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
V+ QK + R + A + + + I S
Sbjct: 69 VIYVQKGSWSTMGSWWRYRNRPDIETRYATEINRIIAGKTLSELIVAVPQMSTIQASARY 128
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK---------INILSPYGDVT 178
+ F + D+ + S L P G
Sbjct: 129 RDREILQIFALGTNQDYPLTASGDLSAGRFFTAQESAAGDAVAVIGNDIATGLFPDGRAV 188
Query: 179 PMGMGIRSKSYTVLGMFRMRFP----DYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
+ +R+ + V+G+F+ + + + M L + + V+ I V V+D
Sbjct: 189 GKSIRLRNHNVRVVGVFKKQGKFLGLFSFDNQLIMPLGAFTKVYGKTSMVT-IRVKVRDE 247
Query: 235 DAIEKTHENIV 245
I + E +
Sbjct: 248 KRIPEAKEELT 258
>gi|328956473|ref|YP_004373859.1| uncharacterized ABC transporter permease YknZ [Carnobacterium sp.
17-4]
gi|328672797|gb|AEB28843.1| uncharacterized ABC transporter permease YknZ [Carnobacterium sp.
17-4]
Length = 397
Score = 43.2 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 38/81 (46%), Gaps = 10/81 (12%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F AW L N+K +F ++ IG++IG+ A+ +MS+ GF +++ +
Sbjct: 1 MF----FKGAWNALLKNKKRSF------LTMIGIVIGIAAVSTIMSIGRGFENYVVESLN 50
Query: 63 GINGHVVIQQKYYPLVDYQFI 83
G ++ + D ++
Sbjct: 51 PDEGELLTVDIQFQADDVDWM 71
>gi|302188457|ref|ZP_07265130.1| ABC transporter [Pseudomonas syringae pv. syringae 642]
Length = 653
Score = 43.2 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 37/252 (14%), Positives = 95/252 (37%), Gaps = 10/252 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++AW L S+R + ++ +G++IG+ +++ ++++ G + ++K + I +
Sbjct: 262 AFVMAWVALISHRMR------TLLTMLGIIIGITSVVSIVAIGEGAKRYVLKDIEAIGSN 315
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + + + + DV + + + ++ S
Sbjct: 316 TIEVFPGSDFGDTKSMDIQTLALSDVTALSSQYYIDSATPNIGRNLLVRYRNIDVSATVS 375
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ S+ + G G + A+ + I +I + P D + + +
Sbjct: 376 GVSPSYFQVRGTRMGSG-VGFNKDDARRQAQVVVIDYNTRIRLFGPKADPLGQVILVGNL 434
Query: 188 SYTVLGMFRMRFPDYDNG---MVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
TV+G+ + +D ++M + A ++ + I V VKD + +N+
Sbjct: 435 PCTVIGVTENKKNIFDTSKNLNIWMPYETASGRLLGQSYLDSITVRVKDGQPSKVVEDNV 494
Query: 245 VRILGNGVVVID 256
++L D
Sbjct: 495 NKLLQKRHGTKD 506
>gi|332180619|gb|AEE16307.1| protein of unknown function DUF214 [Treponema brennaborense DSM
12168]
Length = 410
Score = 43.2 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 39/270 (14%), Positives = 85/270 (31%), Gaps = 24/270 (8%)
Query: 7 FEVIV-AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
FE V A + +N+ F +S +G++IGV ++I+V ++ + + + + +
Sbjct: 2 FEDFVNALQNFKTNKTRTF------LSLLGIVIGVTSVIIVTTMGSSLYKSLAGQFNDFS 55
Query: 66 GHVVIQQKYYPLV--------DYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVL 117
++ + + ++ + IP++ V + A V
Sbjct: 56 MDMITLSPQWNRSTNKPYIELNDEYRTTLIREIPEIKNVFYTNTFDANVIRADLSVGSKQ 115
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
++ I L+ +DF G I D G+ +
Sbjct: 116 IQAIEPERLETLKLKIDYGGLFSPSDFVNGFQKAIIGDQIAKELFPEGNAVGKRMTLQIK 175
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDY---DNGMVYMSLQEAQLYFNLENAVSGI---EVFV 231
+ + ++ + VY+ + + S + EV V
Sbjct: 176 SSNEHVPPYNFSFEVIGVLTPKNNWLIQSSQSVYVPRKFYADKLAVAGERSTVWNAEVSV 235
Query: 232 ---KDPDAIEKTHENIVRILGNGVVVIDWQ 258
+D +E + I + LG G W
Sbjct: 236 YRAQDSGKVESKIKKISQELGGGYPYAVWT 265
>gi|171060379|ref|YP_001792728.1| hypothetical protein Lcho_3709 [Leptothrix cholodnii SP-6]
gi|170777824|gb|ACB35963.1| protein of unknown function DUF214 [Leptothrix cholodnii SP-6]
Length = 403
Score = 43.2 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
++A R + N + ++ +G++IGV A+I ++++ NG + ++ + ++
Sbjct: 6 FLLALREIRRNLLR------AGLTTLGIVIGVAAVITMVTLGNGATRAVQDQISSLGSNL 59
Query: 69 VI 70
++
Sbjct: 60 LM 61
>gi|260060635|ref|YP_003193715.1| putative ABC transporter [Robiginitalea biformata HTCC2501]
gi|88784765|gb|EAR15934.1| putative ABC transporter [Robiginitalea biformata HTCC2501]
Length = 409
Score = 43.2 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 32/269 (11%), Positives = 75/269 (27%), Gaps = 14/269 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F+R W + SN+ F++ S V G+ L+++++ +NG + K+
Sbjct: 1 MFNRDTWQEIWHSIKSNKLRTFLTGFS------VAWGIFILVLLLASVNGMQNGFYKQFN 54
Query: 63 GINGHVVIQQKY---YPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
+ + P ++ D+ + G S
Sbjct: 55 DDATNSIFIYPNATSKPYGGFEAGRRIQFKNDDLAFIKGSYEGSYEYISPRFNRSVSAKY 114
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
++ + S + + + L D
Sbjct: 115 KQETGTYTIVGVSPDHQLIERTVIESGRYLNKRDLRERNKVLVIGKQVQKELFKDDDPVG 174
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK---DPDA 236
+ Y V+G+F + + +Y Q + + ++ I + D
Sbjct: 175 QFLIANGLVYKVIGVFSDDGNEREESNIYAPYTTMQQIYGNTDEINMIAMTYNPSYDFTR 234
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFF 265
+ +L +V+ + FF
Sbjct: 235 ALAFSNTMEEVLKRRLVIHP--EDQSAFF 261
>gi|206889670|ref|YP_002247974.1| ABC transporter permease protein [Thermodesulfovibrio yellowstonii
DSM 11347]
gi|206741608|gb|ACI20665.1| ABC transporter permease protein [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 409
Score = 43.2 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 39/253 (15%), Positives = 88/253 (34%), Gaps = 15/253 (5%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A R L +N +F ++ +G++IGV A++ ++++ G E + ++ + ++++
Sbjct: 10 IALRSLIANAMRSF------LATLGIIIGVGAVVTMVAIGTGASEKISAQISSMGSNLIL 63
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
+ ++ + VS ++ SG N ++S
Sbjct: 64 ILPGATTQGGIRMGAGTQQTLKIVDAEAISKECSQVSAVAPVISGTAQVVFGNQNWSTAV 123
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
+ V + +D+ +++ + +GD+ P G IR K
Sbjct: 124 LGTTPDMAIVREWEIVSGRFLTEQDVRSGTKVAVIGQTVSEKLFGDLDPTGKLIRIKKIP 183
Query: 191 V------LGMFRMRFPDYDNGMVYMSLQEAQL-YFN--LENAVSGIEVFVKDPDAIEKTH 241
+ + ++Y+ + AQ F L V I +AI
Sbjct: 184 FEVVGVLGKKGQSPTGQDQDDIIYVPITTAQRTLFGNVLPGRVRLIYAKAVSLEAIPLAT 243
Query: 242 ENIVRILGNGVVV 254
E I +L +
Sbjct: 244 EQIRTLLRQRHRI 256
>gi|323697508|ref|ZP_08109420.1| ABC transporter related protein [Desulfovibrio sp. ND132]
gi|323457440|gb|EGB13305.1| ABC transporter related protein [Desulfovibrio desulfuricans ND132]
Length = 647
Score = 42.8 bits (98), Expect = 0.043, Method: Composition-based stats.
Identities = 30/250 (12%), Positives = 87/250 (34%), Gaps = 8/250 (3%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A + +++ F ++ +G++IG+ +++ V+++ G ++ ++ + I +V
Sbjct: 257 LRMALSAMAAHKLRTF------LTMLGIIIGIASVVSVVALGQGSQQRVLNDISAIGTNV 310
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ D + D + + +S+ ++ S
Sbjct: 311 IDIFPGEDFGDRRSGNIHTLVPSDADVLARQSYVDSVTPKVSTSVDLRYRNVDVDASVSG 370
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGK--DLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ + R YG + ++ K +A + + + +
Sbjct: 371 VNELYFRVYGYEMDQGRSFDADMVRKIGQVAVIDQNTYKRLFSAGEQVVGKVIILGSVPC 430
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ V + P+ D+ +++ A ++ + I V VKD ++ + I
Sbjct: 431 RIIGVTKAKQTFGPNSDSLNIWVPYTTAMHRMIGQSYLGSITVRVKDGAPMQAAEQGINH 490
Query: 247 ILGNGVVVID 256
+L + D
Sbjct: 491 LLTRRHKLKD 500
>gi|224823776|ref|ZP_03696885.1| protein of unknown function DUF214 [Lutiella nitroferrum 2002]
gi|224604231|gb|EEG10405.1| protein of unknown function DUF214 [Lutiella nitroferrum 2002]
Length = 389
Score = 42.8 bits (98), Expect = 0.044, Method: Composition-based stats.
Identities = 30/253 (11%), Positives = 85/253 (33%), Gaps = 8/253 (3%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+AWR L ++R +F ++ +G++IG+ +++ V+++ G R+ ++K + + + +
Sbjct: 1 MAWRALTAHRLRSF------LTMLGIIIGIASVVSVVALGEGSRQRILKDISSMGTNTID 54
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
D + A D + + G+SS + ++ +
Sbjct: 55 IFPGAGFGDRKADAIHTLTARDAEVLTQQSFVDSVTPGVSSSVTLRYRNVAVSAQVKGVG 114
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK--INILSPYGDVTPMGMGIRSKS 188
+ R G + + + + K + + ++
Sbjct: 115 EQYFRVKGVELDLGKAFDAGAVRRKAQEVVIDPNTRKALFGAGFDPVGQVILVGSVPARV 174
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
V F + +N +++ ++ + + V + D + IV+++
Sbjct: 175 IGVSKKQNSAFGNDENLNLWLPYSTVMSRMLGQDYLKSVTVRIGDSVSSSAAEAGIVKLM 234
Query: 249 GNGVVVIDWQQRY 261
D+
Sbjct: 235 KRRHGSQDFYVMN 247
>gi|153010879|ref|YP_001372093.1| ABC transporter related [Ochrobactrum anthropi ATCC 49188]
gi|151562767|gb|ABS16264.1| ABC transporter related [Ochrobactrum anthropi ATCC 49188]
Length = 653
Score = 42.8 bits (98), Expect = 0.044, Method: Composition-based stats.
Identities = 26/244 (10%), Positives = 75/244 (30%), Gaps = 9/244 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A R + ++R F ++ +G++IG +++ V+++ G + +++R+ + +
Sbjct: 261 AFAMALRSMNAHRLRTF------LTMLGIIIGTASVVCVVALGQGSQRQILERISDLGTN 314
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + + D ++ A S+ + + + +
Sbjct: 315 TLYISPGRGFGDLKAAQITTLNLDDAKEIAKLPYVVAATPSGSTSSTIRVGDKEVSVSVN 374
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ + + + + + G V + +
Sbjct: 375 GVGAEYFVTRNSKLLEGRFFDQRNVDDLEQVAMVDETAKTTLFPHEVGSVIGKIILLNKV 434
Query: 188 SYTVLGMFRMRFPDYDNGM---VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
++G+ + VY+ Q ++ I V V D + + I
Sbjct: 435 PVRIVGVVKAEERGPGGAQTLEVYLPYTTVQTRMTGSRSLQMILVRVADTMDPSEAEKLI 494
Query: 245 VRIL 248
L
Sbjct: 495 TAFL 498
>gi|311280211|ref|YP_003942442.1| ABC transporter related protein [Enterobacter cloacae SCF1]
gi|308749406|gb|ADO49158.1| ABC transporter related protein [Enterobacter cloacae SCF1]
Length = 647
Score = 42.8 bits (98), Expect = 0.044, Method: Composition-based stats.
Identities = 25/255 (9%), Positives = 82/255 (32%), Gaps = 11/255 (4%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + + +
Sbjct: 256 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVIVGDAAKQRVLADIRAMGTN 309
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D++ + + +S + + +
Sbjct: 310 TIDVYPGKDFGDDDPQYQQALKYDDLLAIQKQPWVSSATPAVSKNLRLRMNNTDVAASAN 369
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ V + + + + + +
Sbjct: 370 GVGPQYFNVYGMTFSEGSTFNDVQLRGRAQVVVLDGNTRRQLFPHKASVVGEIILVGNMP 429
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ V + F V++ ++ ++ I V VK+ + +
Sbjct: 430 ATVVGVADEKQSMFGSSKILRVWLPYTTMAGRVIGQSWLNSITVRVKEGYDSTLAEQQLA 489
Query: 246 RILGNGV---VVIDW 257
R+L + W
Sbjct: 490 RLLNLRHGKKDIFTW 504
>gi|229815488|ref|ZP_04445819.1| hypothetical protein COLINT_02535 [Collinsella intestinalis DSM
13280]
gi|229808925|gb|EEP44696.1| hypothetical protein COLINT_02535 [Collinsella intestinalis DSM
13280]
Length = 411
Score = 42.8 bits (98), Expect = 0.044, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
A+R L +N+ S ++ +G++IG+ A+I + S++ G R +I
Sbjct: 10 AFRSLEANKGR------SLLTILGIVIGIAAVIAMTSLIGGVRNGLIS 51
>gi|319789857|ref|YP_004151490.1| protein of unknown function DUF214 [Thermovibrio ammonificans HB-1]
gi|317114359|gb|ADU96849.1| protein of unknown function DUF214 [Thermovibrio ammonificans HB-1]
Length = 396
Score = 42.8 bits (98), Expect = 0.045, Method: Composition-based stats.
Identities = 36/263 (13%), Positives = 74/263 (28%), Gaps = 18/263 (6%)
Query: 3 IFSRF--EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+F F E+I++ Y N+ + + +G++ GV++LI+V++ + G K
Sbjct: 1 MFRLFLRELILSLTY---NKVR------TAFAVLGILFGVVSLILVVAAIEGSSLQARKV 51
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIK-VLPFVSGQAFVSGLSSGGSGVLVR 119
+ + V+ + L L + + + S +
Sbjct: 52 IEKLGPDSVLIVSGSVGKGPRSGFQNLSLEDVKEIGKLEGIFALTYGIVKPTTVSDIKSS 111
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
S+ S Y K +A +P G
Sbjct: 112 KFSSVFGVGENWLKSWNYKVEIGRGFTPNDFKELKKVAVVGHDVSDFFWPGENPVGKTIL 171
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIE 238
+G + + V++ + N VS I V +
Sbjct: 172 VGKTPFRVIGVYKKKGKTPNGHNLDNRVFIPYRVFDKTVEKTFNKVSVIRFRVFNLSEYN 231
Query: 239 KTHENIVRIL-----GNGVVVID 256
+ + IL + +VI
Sbjct: 232 QIVQETREILLKHHKPDQFMVIT 254
>gi|40062676|gb|AAR37589.1| permease, putative [uncultured marine bacterium 314]
Length = 417
Score = 42.8 bits (98), Expect = 0.046, Method: Composition-based stats.
Identities = 41/256 (16%), Positives = 87/256 (33%), Gaps = 11/256 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ + W ++ N++ IS+ S ++IG + + GF +I V +
Sbjct: 9 IKIGWLSIWRNKRRTLISLFS------IVIGTGIPTFFVCIAWGFYAGLIDDVARLMSGH 62
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
V + D + + ++ G +G
Sbjct: 63 VTYEHVDYRNSPSNDLWVNDIQKINKTLNSNAEVLSTKQIVNLQGVAHTAKGSVGISLMG 122
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI---R 185
++ S + G+ + G +G + + +N+ V
Sbjct: 123 IEPSKEITISFLPESIVEGEYLSEGDGRWVIVGNKLAENLNVNVGKKFVFTTSDIKGELV 182
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHENI 244
+ + V G+F+ + D V ++ A++ L N VS + + VK+PD E+ ++
Sbjct: 183 EELFRVKGIFKTGSKEIDGHFVQSDIELARMVAGLSSNDVSQLGIIVKNPDTHERFLRDM 242
Query: 245 VRIL-GNGVVVIDWQQ 259
+ L V + WQQ
Sbjct: 243 QKTLAKKNGVFLSWQQ 258
>gi|270262960|ref|ZP_06191231.1| ABC transporter related protein [Serratia odorifera 4Rx13]
gi|270043644|gb|EFA16737.1| ABC transporter related protein [Serratia odorifera 4Rx13]
Length = 649
Score = 42.8 bits (98), Expect = 0.046, Method: Composition-based stats.
Identities = 23/238 (9%), Positives = 74/238 (31%), Gaps = 2/238 (0%)
Query: 26 SIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIAN 85
+ + ++ +G++IG+ +++ V+++ G ++ ++ + + + D + A
Sbjct: 270 RLRTLLTMLGIIIGIASVVSVVALGKGSQQQVLANINAMGTSTLEIYPGKDFGDMRSAAI 329
Query: 86 RLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFD 145
+ D + + LSS + + + + + G +
Sbjct: 330 QTLRATDADALSQQGYVHSVTPTLSSSTTFRYGNQSVSGTVNGVGEQYFLVRGYSIDSGM 389
Query: 146 RGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS--KSYTVLGMFRMRFPDYD 203
+ + + + + + + + V + F +
Sbjct: 390 AFNRHSVDNLMQEAVIDENTRNKLFPNGANPIGEVILLGSLPCRIIGVAAKKQSGFGSDE 449
Query: 204 NGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRY 261
N V++ ++ + I V V D + + + R+L D+
Sbjct: 450 NLNVWIPYTTVMKRMLGQSYLKSITVRVNDDVDLGSAEDGVTRLLSQRHGTKDFFVMN 507
>gi|229495362|ref|ZP_04389097.1| efflux ABC transporter, permease protein [Porphyromonas
endodontalis ATCC 35406]
gi|229317805|gb|EEN83703.1| efflux ABC transporter, permease protein [Porphyromonas
endodontalis ATCC 35406]
Length = 417
Score = 42.8 bits (98), Expect = 0.046, Method: Composition-based stats.
Identities = 28/277 (10%), Positives = 78/277 (28%), Gaps = 9/277 (3%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFI-SIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
M + +A R + S + +G+ + + +++ + V GFR + +
Sbjct: 1 MK-IRIYPFFLAQRLAARQSAASRATSSLLRFTVLGIALSLAVMLLTIFVGKGFRNQVHE 59
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+ + GH+++ + D + + + + V
Sbjct: 60 RIYLLTGHIILNEYGRNYADESASLRITPELLSELAGIEGIGEIRQVVQSGGIIKTDSDF 119
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
++++ G + + + L + +K+ +
Sbjct: 120 SAVLVMGVSSRDAYLHTSGVLRDGYIPYFDGSDTLHNPILLPLECAEKLRLTVGDKVPIY 179
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+ + +V + E+ V+ +E+FV+
Sbjct: 180 FTGARTTVRTFTIAGIVDLPHIEAPIVVAPIGVMRHVAHIDEDKVTRLELFVQPKVDHLA 239
Query: 240 THENIVRIL-------GNGVVVIDWQQRYQIFFSCYE 269
+ +V L G + + + F+ E
Sbjct: 240 LSDRLVEQLSKSPNTGGQSLGMYTAESLMPDIFAWIE 276
>gi|182413458|ref|YP_001818524.1| hypothetical protein Oter_1640 [Opitutus terrae PB90-1]
gi|177840672|gb|ACB74924.1| protein of unknown function DUF214 [Opitutus terrae PB90-1]
Length = 408
Score = 42.8 bits (98), Expect = 0.046, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 35/87 (40%), Gaps = 6/87 (6%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +A L +N+ S ++ +G+ +GV ++I VM+V+ G R ++ +
Sbjct: 1 MIFAEIFKLALSSLAANKLR------SGLTMLGIAVGVFSVIGVMTVITGLRTNIENGLN 54
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDF 89
+ + KY + +
Sbjct: 55 VLGANSFQFTKYPAINFSDPHQRFANR 81
>gi|266626114|ref|ZP_06119049.1| ABC-type transport system [Clostridium hathewayi DSM 13479]
gi|288861980|gb|EFC94278.1| ABC-type transport system [Clostridium hathewayi DSM 13479]
Length = 247
Score = 42.8 bits (98), Expect = 0.047, Method: Composition-based stats.
Identities = 28/240 (11%), Positives = 65/240 (27%), Gaps = 7/240 (2%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A + + N+ +F ++ +G++IGV ++I+++S++NG M + + +
Sbjct: 1 FKMAMKSIMGNKMRSF------LTMLGIIIGVASVIILVSLVNGQMSYMTESFASMGTNQ 54
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + +F D + ++ VS G+ +
Sbjct: 55 ITVNVTNLSTRSVSVDEMYEFYEDNRDLFAQMTPNVTVSTTVKNGTESSTSTTVSGVSEE 114
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ + + + G R
Sbjct: 115 YLEMKDMELESGRFIQYSDIVSRQKVCVVGYYVAWDLYGGVEKAIDQTIKIGGNAFRIIG 174
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ V+M A N +S D + E+ I L
Sbjct: 175 VAARQDDDELESGGSDDFVWMPYSCAAKMTRNAN-ISSYTFATADMNHTEEAKTAIDDFL 233
>gi|288930413|ref|YP_003434473.1| hypothetical protein Ferp_0006 [Ferroglobus placidus DSM 10642]
gi|288892661|gb|ADC64198.1| protein of unknown function DUF214 [Ferroglobus placidus DSM 10642]
Length = 373
Score = 42.8 bits (98), Expect = 0.048, Method: Composition-based stats.
Identities = 38/256 (14%), Positives = 82/256 (32%), Gaps = 26/256 (10%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A R L + S ++ +GV+IGV A I + + ++ + +
Sbjct: 3 LQMALRNLGRAKVR------SVLAAVGVIIGVTA-IASIGIFGESLKNAVLENFKDLANE 55
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
VI L I + + ++ + + S + +
Sbjct: 56 VIITPSRTHGYSAIDERTLMKIEKSPYISEIIPVKSAAAEIISKKRTISTVYGLDE---- 111
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ + S G ++GK LA L + +G KI + V+ + ++
Sbjct: 112 --DDAREMFKAESGKISFGGRCVVGKMLAEALELRVGSKIYVSGKLFKVSAILEAEGARF 169
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
N V +S ++ F + + V VK + + + E + +
Sbjct: 170 DVN-----------PNYAVIISREDFDKLFG--DGYDIVIVKVKSIEDVSRFKEYVESRI 216
Query: 249 GNGVVVIDWQQRYQIF 264
V+D + I
Sbjct: 217 NYKEKVVDVFEMKSIL 232
>gi|168177956|ref|ZP_02612620.1| putative ABC transporter, permease protein [Clostridium botulinum
NCTC 2916]
gi|182670616|gb|EDT82590.1| putative ABC transporter, permease protein [Clostridium botulinum
NCTC 2916]
Length = 822
Score = 42.8 bits (98), Expect = 0.048, Method: Composition-based stats.
Identities = 30/260 (11%), Positives = 74/260 (28%), Gaps = 21/260 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M +F + +A+ + N+ + + + +M+ I+ S + + + K
Sbjct: 1 MKLF----LKIAFNSIKKNKIRYILLTCTLVLSTIIMLSTS--IIKDSAIKIREDQLRKT 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
L + + P + + I N + I + ++P + G A + + V
Sbjct: 55 TLNSQLVITTADEKDPFFNPKDIINSIKDIDGISHIVPRIGGMAKDYKTLKDVNIIGVDL 114
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
++ + N+ + L I +
Sbjct: 115 NKQKAAFPIELIDKYKVKDKENEIIINEKYAKENSLKVGAKIKLVIGTRNKEFIISGISK 174
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
D +S+ AQ + ++ I + +K+ D I
Sbjct: 175 ---------------NTGVFDPSMNTAMISIDNAQYLLDQKDNAYSIGITIKNLDDINNM 219
Query: 241 HENIVRILGNGVVVIDWQQR 260
E I + + ++
Sbjct: 220 IEEIKPKVSSKFIIQQRYDM 239
>gi|330832367|ref|YP_004401192.1| peptide ABC transporter permease [Streptococcus suis ST3]
gi|329306590|gb|AEB81006.1| peptide ABC transporter permease [Streptococcus suis ST3]
Length = 415
Score = 42.8 bits (98), Expect = 0.048, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A + + +++ S ++ +G++IGV A+++++++ G + + K + G +V
Sbjct: 4 WKFALKSIMAHKMR------SLLTMLGIIIGVAAVVIIVAMGTGMSKSIEKSLAGDQNNV 57
Query: 69 VIQQ 72
+
Sbjct: 58 QVYF 61
>gi|325137667|gb|EGC60244.1| macrolide export ATP-binding/permease protein MacB [Neisseria
meningitidis ES14902]
Length = 644
Score = 42.8 bits (98), Expect = 0.048, Method: Composition-based stats.
Identities = 31/231 (13%), Positives = 76/231 (32%), Gaps = 5/231 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG ++ +++ + I + + D + +
Sbjct: 269 SLLTMLGIIIGIASVVSVVALGNGSQKKILEDISSIGTNTISIFPGRGFGDRRSGRIKTL 328
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I D + + SSGG+ + + + G
Sbjct: 329 TIDDAKIIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFD 388
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ +D + + R + TV+G+ + + N V
Sbjct: 389 ENDVKEDAQVVVIDQNVKDKLFADSDPLGKTI--LFRKRPLTVIGVMKKDENAFGNSDVL 446
Query: 209 MSLQEAQLYFNL---ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
M + E+ + I V +KD + + + +L D
Sbjct: 447 MLWSPYTTVMHQITGESHTNSITVKIKDNANTQVAEKGLADLLKARHGTED 497
>gi|325266988|ref|ZP_08133658.1| macrolide export ABC superfamily ATP binding cassette transporter,
ABC/membrane protein [Kingella denitrificans ATCC 33394]
gi|324981488|gb|EGC17130.1| macrolide export ABC superfamily ATP binding cassette transporter,
ABC/membrane protein [Kingella denitrificans ATCC 33394]
Length = 695
Score = 42.8 bits (98), Expect = 0.049, Method: Composition-based stats.
Identities = 31/236 (13%), Positives = 75/236 (31%), Gaps = 2/236 (0%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ A++ V+++ G +E ++ + + + + D + +
Sbjct: 319 SMLTMLGIIIGIAAVVSVVALGRGTQEKILSDINSMGTNTISVFPGKGFGDRRSGKVKTL 378
Query: 89 FIPDVIKVLP--FVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDR 146
+ D + +V S + + + ++ + Q R
Sbjct: 379 TVADSDAIAKLSYVESTTPSVSTSGTVTYRNIDLTAAANGAGPQFFDVRGLKLDQGRLYD 438
Query: 147 GKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGM 206
+ V +A ++ S M L F D +
Sbjct: 439 DEDVRSNAQVAVIDSNAVAQLFPDGSDPLGKVIMMDKRPLTIIGTLKKEDNSFGDSSSVN 498
Query: 207 VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQ 262
+Y+ + ++GI V VKD + + + +L D+ R
Sbjct: 499 IYVPYTTLMHQISGSKHINGIAVKVKDNVDSQTAEKGVKELLLARHGTEDFFTRNS 554
>gi|284045167|ref|YP_003395507.1| hypothetical protein Cwoe_3715 [Conexibacter woesei DSM 14684]
gi|283949388|gb|ADB52132.1| protein of unknown function DUF214 [Conexibacter woesei DSM 14684]
Length = 852
Score = 42.8 bits (98), Expect = 0.049, Method: Composition-based stats.
Identities = 28/247 (11%), Positives = 65/247 (26%), Gaps = 7/247 (2%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
++ R L S + ++ + +GV + I+ ++ F + +
Sbjct: 4 LSLRGLVSRKLRTVLTAMAI--VLGVGLVSGTYILTDTMNKSFDSVFESVNRNTDVSITP 61
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
++++ F A+ L + V V + +G + + L
Sbjct: 62 KEQFDDAGATPFSADVLRQVEAVPGVAVAAGSVDSDGAVLYKKNGRDPLAAAGGGGTVLT 121
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
+ R + L + K+ S
Sbjct: 122 SESPRELDPLRYVEGHPPAGPDEIVLDKGSADKGDFKL----GDEVRLSADGPQESFRLV 177
Query: 191 VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG- 249
+ + + + L+ AQ ++ S I V + E+ I L
Sbjct: 178 GIAKLGDQDSIAGASLAVVQLETAQRLLDMRGEFSSISVKAESGVTPEELSRRIRAELPA 237
Query: 250 NGVVVID 256
+ V
Sbjct: 238 DRYNVRT 244
>gi|320539593|ref|ZP_08039258.1| putative fused macrolide transporter subunits of ABC superfamily:
ATP-binding component/membrane component [Serratia
symbiotica str. Tucson]
gi|320030352|gb|EFW12366.1| putative fused macrolide transporter subunits of ABC superfamily:
ATP-binding component/membrane component [Serratia
symbiotica str. Tucson]
Length = 648
Score = 42.8 bits (98), Expect = 0.049, Method: Composition-based stats.
Identities = 24/250 (9%), Positives = 79/250 (31%), Gaps = 10/250 (4%)
Query: 3 IFSRF--EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+ R +++AWR + +N+ + ++ +G++IG+ +++ ++ + + ++ ++
Sbjct: 250 MVGRLREALVMAWRAMTANKMR------TALTMLGIIIGIASVVSILVIGDAAKQRVLAD 303
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ I + + D + D+ + + S L
Sbjct: 304 IKSIGTNTIDIYPGKDFGDDNPTFRQSLKYEDLDALREQPYVSVLSPTIGSSTRLRLGNV 363
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK--INILSPYGDVT 178
++ S + + R YG + + + + +
Sbjct: 364 DVAANVSGVNEQYFRVYGMTFTQGAGIDVMQVQSQSQTVVIDANTQRRLFPHQKQVVGEV 423
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+ + + V + F +++ I V ++D +
Sbjct: 424 ILVGNMPATVVGVAKQKQSMFGSSKTLNIWVPYSTMANRLMGNTYFDSITVRIRDGYSSH 483
Query: 239 KTHENIVRIL 248
+ + + R+L
Sbjct: 484 EVEQQLTRLL 493
>gi|227356764|ref|ZP_03841149.1| macrolide-specific ABC family efflux carrier [Proteus mirabilis
ATCC 29906]
gi|227163054|gb|EEI47989.1| macrolide-specific ABC family efflux carrier [Proteus mirabilis
ATCC 29906]
Length = 647
Score = 42.8 bits (98), Expect = 0.050, Method: Composition-based stats.
Identities = 29/243 (11%), Positives = 78/243 (32%), Gaps = 8/243 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR + N+ + ++ +G++IG+ +++ ++ + + ++ ++ + I +
Sbjct: 256 ALNMAWRAMVVNKIR------TLLTMLGIIIGIASVVTIIVIGDAAKDRVLADIKAIGAN 309
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ L + I DV + Q+ + + + S
Sbjct: 310 TIDIYPGKELGSDSPEDKQSLTIQDVDALKQQSYIQSVTPQIYFSSRLRRGNQDAPATVS 369
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGK--DLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ + Y +I + + + + I
Sbjct: 370 GVNEDYFSVYALKFAQGSTFTPDMIHRQAQVVVIDENTRHRFFPNKQAVIGEQIIIRNIP 429
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
S V+ + F D + V++ + + I V VK+ + I+
Sbjct: 430 STIIGVVAEQKSTFGDNKSLRVWVPYSTLSSRIYNRSYLDNITVKVKEGYDASVAEQQIL 489
Query: 246 RIL 248
R+L
Sbjct: 490 RLL 492
>gi|197284582|ref|YP_002150454.1| macrolide transporter ATP-binding /permease [Proteus mirabilis
HI4320]
gi|194682069|emb|CAR41605.1| macrolide-specific ABC-type efflux carrier [Proteus mirabilis
HI4320]
Length = 647
Score = 42.8 bits (98), Expect = 0.050, Method: Composition-based stats.
Identities = 29/243 (11%), Positives = 78/243 (32%), Gaps = 8/243 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR + N+ + ++ +G++IG+ +++ ++ + + ++ ++ + I +
Sbjct: 256 ALNMAWRAMVVNKIR------TLLTMLGIIIGIASVVTIIVIGDAAKDRVLADIKAIGAN 309
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ L + I DV + Q+ + + + S
Sbjct: 310 TIDIYPGKELGSDSPEDKQSLTIQDVDALKQQSYIQSVTPQIYFSSRLRRGNQDAPATVS 369
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGK--DLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ + Y +I + + + + I
Sbjct: 370 GVNEDYFSVYALKFAQGSTFTPDMIHRQAQVVVIDENTRHRFFPNKQAVIGEQIIIRNIP 429
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
S V+ + F D + V++ + + I V VK+ + I+
Sbjct: 430 STIIGVVAEQKSTFGDNKSLRVWVPYSTLSSRIYNRSYLDNITVKVKEGYDASVAEQQIL 489
Query: 246 RIL 248
R+L
Sbjct: 490 RLL 492
>gi|42527785|ref|NP_972883.1| permease, putative [Treponema denticola ATCC 35405]
gi|41818613|gb|AAS12802.1| permease, putative [Treponema denticola ATCC 35405]
Length = 412
Score = 42.8 bits (98), Expect = 0.050, Method: Composition-based stats.
Identities = 41/259 (15%), Positives = 73/259 (28%), Gaps = 27/259 (10%)
Query: 7 FEVIV-AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSV-----------MNGFR 54
FE + A +N+ + +S +G++IGV ++I+V S+ F
Sbjct: 2 FEDFINALHNFRTNKMR------TLLSLLGIVIGVTSVIIVTSLASSLSNSMIKEFEEFS 55
Query: 55 EDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
D+I + + D F + IP++ V + QA +
Sbjct: 56 MDIINIGTQADNPEFAGEGKIIKFDEAFRKKLMQKIPEIKHVFYSNTFQASIIRNDLRIE 115
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVII---GKDLARNLGISIGDKINIL 171
+ GI + S+D+ G I K L
Sbjct: 116 ISDIEGIEAERLESHRVVMDYGSFFSSSDYSTGAEKAIIGERIAFQLFPEGRAVGKFITL 175
Query: 172 SPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSG----I 227
I + + + + V++ + L VS
Sbjct: 176 QIPSSSEKSPPLIVRLQVIGVVKPKNTWVIRTSDAVFVPRKF--ALSRLPGKVSEAVWAA 233
Query: 228 EVFVKDPDAIEKTHENIVR 246
EV + DP K I
Sbjct: 234 EVAISDPKVSSKVEVKIQD 252
>gi|148555064|ref|YP_001262646.1| hypothetical protein Swit_2149 [Sphingomonas wittichii RW1]
gi|148500254|gb|ABQ68508.1| protein of unknown function DUF214 [Sphingomonas wittichii RW1]
Length = 402
Score = 42.8 bits (98), Expect = 0.050, Method: Composition-based stats.
Identities = 33/255 (12%), Positives = 83/255 (32%), Gaps = 16/255 (6%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
++A R + + +F ++ +G++IGV A++ ++++ G + +++ + +V
Sbjct: 6 FLLAVREIRRHLLRSF------LTILGIVIGVWAVVTMVTLGQGATAAVKQQISSLGANV 59
Query: 69 VI-------QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ + F LD I I + V+ +G + + +
Sbjct: 60 LQVRPGQGFGRGGGGPQPPDFKIEDLDAIRTQIVGVQAVAPLVQSTGTAVYNAANWSTTV 119
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ ++ Y F G GK + + P G +
Sbjct: 120 NGTNREYFTAQPWTFTGGRI---FSPAEEQAGKAVCIVGNTVRNRLFRGIDPVGQRFRIK 176
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
T+ + F + + +V M + Q V + + V ++
Sbjct: 177 NISCEIIGTLAPKGQGGFGNDQDDIVLMPYKAVQRRMTGNRDVRMMMISVDADYDSQRVQ 236
Query: 242 ENIVRILGNGVVVID 256
++ +L + D
Sbjct: 237 ASLRDLLRERRHLSD 251
>gi|34498159|ref|NP_902374.1| ABC transporter ATP-binding protein [Chromobacterium violaceum ATCC
12472]
gi|81834613|sp|Q7NUJ3|MACB_CHRVO RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|34104014|gb|AAQ60374.1| probable ABC transporter, ATP-binding protein [Chromobacterium
violaceum ATCC 12472]
Length = 644
Score = 42.8 bits (98), Expect = 0.051, Method: Composition-based stats.
Identities = 30/252 (11%), Positives = 77/252 (30%), Gaps = 16/252 (6%)
Query: 26 SIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIAN 85
+ + ++ +G++IG+ +++ V+++ G R+ ++K + + + + D +
Sbjct: 267 RLRTALTMLGIVIGIASVVSVIAIGEGSRDYVLKGIREMGTQTITVFRGKDWGDDKADGV 326
Query: 86 RLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFD 145
R DV + + + N+ + F R G +
Sbjct: 327 RTFLPGDVAALEGEGYVDSVTPETAQAQRIRYRNVDVNASVIGVGRDFFRVQGMKLAEGQ 386
Query: 146 RGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNG 205
I + + + +G+ + + R R ++
Sbjct: 387 SFSRDDIHFQRQVVVLDKNSRRKLFGDGEAVGRVILVGMVPATVIGVVAQRDRGFGGNSL 446
Query: 206 MVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQI-- 263
++M A + + VKD + + I +L QR+
Sbjct: 447 QMWMPYSTAASRLFGQQHFDRFVIRVKDGQPTKLAEKAIGALL---------TQRHGGKD 497
Query: 264 FF-----SCYES 270
FF ++
Sbjct: 498 FFTYNMDEILKT 509
>gi|313205153|ref|YP_004043810.1| hypothetical protein Palpr_2695 [Paludibacter propionicigenes
WB4]
gi|312444469|gb|ADQ80825.1| protein of unknown function DUF214 [Paludibacter propionicigenes
WB4]
Length = 406
Score = 42.8 bits (98), Expect = 0.051, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ ++ R L +N+ AF ++ +G++IGV ++I ++++ G + + ++ + ++
Sbjct: 7 IKISLRALSNNKMRAF------LTMLGIIIGVASVITMLAIGQGSKMSIQAQISEMGSNM 60
Query: 69 VIQQKYYPLV 78
++ Q ++
Sbjct: 61 IMIQPGAGMM 70
>gi|312621314|ref|YP_004022927.1| hypothetical protein Calkro_0195 [Caldicellulosiruptor
kronotskyensis 2002]
gi|312201781|gb|ADQ45108.1| protein of unknown function DUF214 [Caldicellulosiruptor
kronotskyensis 2002]
Length = 398
Score = 42.8 bits (98), Expect = 0.052, Method: Composition-based stats.
Identities = 34/252 (13%), Positives = 74/252 (29%), Gaps = 8/252 (3%)
Query: 1 MSIFSRFE-VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
M FE +A + L N+ F +S +GV+IG A+IV + ++ + K
Sbjct: 1 MKYAKFFEAFKIAAKSLIHNKTRTF------LSILGVIIGTCAIIVSVGLVQSVSISVSK 54
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
++ +I Y + + + V+ + P + V V
Sbjct: 55 QLEESGLDSLILVLNYDIDMSEMYSYLNSKQNLVVGITPKKTYYTEVLSYDGKKYKCEVL 114
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ S + D ++ V I + + + +
Sbjct: 115 LLKPSSYILENLKLVEGRFLSGLDEEKLNKVAIVFK-DQAEKLFNNKEEVLFKKLLIGGE 173
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
I + + Y + + + + + FNLE + + +
Sbjct: 174 EFEVIGTVTKQKRMTDVSIGTSYYDINIIIPYKVGESLFNLEKSSQMFFIKSINSKYNSN 233
Query: 240 THENIVRILGNG 251
+ + L N
Sbjct: 234 IKKLLEEYLRNN 245
>gi|322433714|ref|YP_004215926.1| protein of unknown function DUF214 [Acidobacterium sp. MP5ACTX9]
gi|321161441|gb|ADW67146.1| protein of unknown function DUF214 [Acidobacterium sp. MP5ACTX9]
Length = 419
Score = 42.8 bits (98), Expect = 0.052, Method: Composition-based stats.
Identities = 29/253 (11%), Positives = 68/253 (26%), Gaps = 28/253 (11%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
L +N+ S ++ +G++IGVM +IV+ SV+NG ++ V + +V+ ++
Sbjct: 17 LRTNKLR------SGLTILGIVIGVMTVIVISSVVNGLNSNVANVVQSLGSNVLFIFRFP 70
Query: 76 PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSR 135
+ V+ + ++
Sbjct: 71 VFTGRPTTEMLTRKQMTYDDAVAMRDLPHVVAVAPILQFTDRSNIGGGLGTTSIKAGTHS 130
Query: 136 FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMF 195
+ +L+ + D V S T
Sbjct: 131 MQNTTLEGDTPDVETVSEIELSSGRFFTEDDMARS--ANVTVLGSDTADELFSGTNAIGQ 188
Query: 196 RMRFPDYDNGMVYMSLQEAQLYFNLENAVSG--------------------IEVFVKDPD 235
++ +V ++ ++ Q + +N I + DP
Sbjct: 189 EVQAGGMTFTVVGVAARKKQAFGGGKNPDDNKAYFPITTFHKLHPEQLDYWISLKYDDPK 248
Query: 236 AIEKTHENIVRIL 248
+ + +L
Sbjct: 249 NQSLVQDELTELL 261
>gi|217967128|ref|YP_002352634.1| protein of unknown function DUF214 [Dictyoglomus turgidum DSM 6724]
gi|217336227|gb|ACK42020.1| protein of unknown function DUF214 [Dictyoglomus turgidum DSM 6724]
Length = 408
Score = 42.8 bits (98), Expect = 0.052, Method: Composition-based stats.
Identities = 34/263 (12%), Positives = 79/263 (30%), Gaps = 19/263 (7%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + + +A L SN+ +F ++ +G++IGV ++++++S+ G + ++
Sbjct: 1 MKTQLKENLKLALYSLKSNKLRSF------LTILGIIIGVFSVVLLISIGEGAKNQTLQI 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + + +I F + ++ I L + ++ L V
Sbjct: 55 IENLGSNTLIIFPSALETGGTFTSIQIQRTRRGIPQLFNYNDLLYLRALFKNELLVSSLI 114
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINI----LSPYGD 176
S + Y ND I + +
Sbjct: 115 SSYYNVYYQIFPLEATVHGTDNDGLLINRDSISEGRFFTSYEQNAKEKVCIVGPKVAKNI 174
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMV---------YMSLQEAQLYFNLENAVSGI 227
I FR+ + G + L + ++ +
Sbjct: 175 AINYKEAINKIIKIGDHNFRIIGVLKERGYNQSLGDLDSRIIIPLTTALMLKGDQILNFL 234
Query: 228 EVFVKDPDAIEKTHENIVRILGN 250
V V+D IE + ++ +L
Sbjct: 235 IVQVRDSKNIEIYRQKLIFVLKQ 257
>gi|154498542|ref|ZP_02036920.1| hypothetical protein BACCAP_02532 [Bacteroides capillosus ATCC
29799]
gi|150272610|gb|EDM99795.1| hypothetical protein BACCAP_02532 [Bacteroides capillosus ATCC
29799]
Length = 425
Score = 42.8 bits (98), Expect = 0.052, Method: Composition-based stats.
Identities = 22/223 (9%), Positives = 62/223 (27%), Gaps = 7/223 (3%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + +A + + + + F ++ +GV+IG+ A+I++++ G + M+ +
Sbjct: 1 MNLKQTIKLAAKSIAARKGRTF------LTMLGVIIGLAAVIILVTYAQGTTKQMMDLMK 54
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ + + Y ++ V G +
Sbjct: 55 SMGTNQIQVSAYKWTGGSSDDVVFNSLYNYCKQMDDLVLGVTPNQYCWFTVQYGAKNSNN 114
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLAR-NLGISIGDKINILSPYGDVTPMG 181
+ G+ + G+D+ ++ +
Sbjct: 115 MYSDDGSVQPPQIWMGSDQWAACNNATIAKGRDITYLDVQSGSQVCVLGSYAAKMFFNYA 174
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAV 224
I FR+ ++ Q Y +N +
Sbjct: 175 NPIGETMLFDGVPFRVIGVYESRINEESLTEDTQYYRQQDNFI 217
>gi|309379610|emb|CBX21781.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 644
Score = 42.8 bits (98), Expect = 0.053, Method: Composition-based stats.
Identities = 31/231 (13%), Positives = 75/231 (32%), Gaps = 5/231 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG ++ +++ + + + + D + R
Sbjct: 269 SLLTMLGIIIGIASVVSVVALGNGSQKKILEDISSMGTNTISIFPGRGFGDRRSGKIRTL 328
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I D + + SSGG+ + + + G
Sbjct: 329 TIDDAKIIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFD 388
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ +D + + R + TV+G+ + + N V
Sbjct: 389 ENDVKEDAQVVVIDQNVKDKLFADSDPLGKTI--LFRKRPLTVIGVMKKDENAFGNSDVL 446
Query: 209 MSLQEAQLYFNL---ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
M + E+ + I V +KD + + +L D
Sbjct: 447 MLWSPYTTVMHQITGESHTNSITVKIKDDANTRVAEKGLAELLKARHGTED 497
>gi|329895068|ref|ZP_08270813.1| lipoprotein releasing system transmembrane protein LolC [gamma
proteobacterium IMCC3088]
gi|328922513|gb|EGG29851.1| lipoprotein releasing system transmembrane protein LolC [gamma
proteobacterium IMCC3088]
Length = 246
Score = 42.8 bits (98), Expect = 0.054, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 40/101 (39%), Gaps = 4/101 (3%)
Query: 170 ILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV 229
+ P V+P G+ ++K+ V+G+F + + +M L A+ + G +V
Sbjct: 1 MTLPDVVVSPFGVFPKTKTLRVVGVFD-LSINQSSADAFMDLTTAERLLRRDR--DGWQV 57
Query: 230 FVKDPDAIEKTHENIVRILGN-GVVVIDWQQRYQIFFSCYE 269
+D NI L G+ DW + F+ +
Sbjct: 58 RGQDLWQAPTLASNINIELSPLGLHATDWTETQGSLFASIK 98
>gi|293396850|ref|ZP_06641124.1| macrolide export ATP-binding/permease protein MacB [Serratia
odorifera DSM 4582]
gi|291420321|gb|EFE93576.1| macrolide export ATP-binding/permease protein MacB [Serratia
odorifera DSM 4582]
Length = 648
Score = 42.8 bits (98), Expect = 0.054, Method: Composition-based stats.
Identities = 21/243 (8%), Positives = 78/243 (32%), Gaps = 8/243 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+++AWR + +N+ + ++ +G++IG+ +++ ++ + + ++ ++ + I +
Sbjct: 257 ALVMAWRAMAANKMR------TALTMLGIIIGIASVVSILVIGDAAKQMVLADIKSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
V D + D+ + A + S ++ +
Sbjct: 311 TVDIYPGKDFGDDDPTYRQSLKYDDLDALREQPYVSALSPSIGSSMRLRFGNVDVAANVN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ + R YG + + + + + + + +
Sbjct: 371 GVSEQYFRVYGMGFSQGTGIDALQLQSQAQIAVIDENTRRRLFPHSRNVIGEVILVGNMP 430
Query: 188 SYTVLGMF--RMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ + + F +++ I V +++ ++ + +
Sbjct: 431 ATVIGVAQQKQSMFGSSKTLSIWIPYSTMANRLMGNAYFDSITVRIREGYNSQEAEQQLT 490
Query: 246 RIL 248
R+L
Sbjct: 491 RLL 493
>gi|225075393|ref|ZP_03718592.1| hypothetical protein NEIFLAOT_00398 [Neisseria flavescens
NRL30031/H210]
gi|224953211|gb|EEG34420.1| hypothetical protein NEIFLAOT_00398 [Neisseria flavescens
NRL30031/H210]
Length = 645
Score = 42.8 bits (98), Expect = 0.054, Method: Composition-based stats.
Identities = 28/231 (12%), Positives = 79/231 (34%), Gaps = 4/231 (1%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG ++ +++ + + + + D + +
Sbjct: 269 SLLTMLGIIIGIASVVSVVALGNGSQQKILEDINSMGTNTISIFPGRGFGDRRSGRIKTL 328
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I D + + +SGG+ + + + G +
Sbjct: 329 TINDAKAISQQSYVASATPQTNSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLEEGRLFD 388
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ D + K + + + + + TV+G+ + + N
Sbjct: 389 DDDVKTDAQVVVIDQ-NTKTKLFGEGVNPLGKTILFKKRPLTVIGIMKKDDNSFGNSDSL 447
Query: 209 MSLQEAQLYFNL---ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
M + E+ + I V +KD + +++ +L D
Sbjct: 448 MLWSPYTTVMHQITGESHTNSIVVKIKDDANTQVAEKSLTELLKARHGTED 498
>gi|254522936|ref|ZP_05134991.1| macrolide export ATP-binding/permease protein MacB
[Stenotrophomonas sp. SKA14]
gi|219720527|gb|EED39052.1| macrolide export ATP-binding/permease protein MacB
[Stenotrophomonas sp. SKA14]
Length = 656
Score = 42.8 bits (98), Expect = 0.054, Method: Composition-based stats.
Identities = 34/243 (13%), Positives = 72/243 (29%), Gaps = 8/243 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFRED-MIKRVLGING 66
+A R + ++R F ++ +G++IG+ +++ V+++ G R+ +
Sbjct: 266 AFRMALRAMNAHRMRTF------LTMLGIIIGIASVVSVVALGTGARQAILSNIASLGTT 319
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
+ + + L A SSG + R +
Sbjct: 320 TIEVYPGSGFGDVHAAQVETLTPGDSTALAGQPFVDSATPGVASSGTAQRGNRSANVQMQ 379
Query: 127 SYLQNSFSRF-YGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ F F V + + + D T + +
Sbjct: 380 GVSEQYFRVHGLKLGQGRFFGQPAVAGYQQVVVIDANTRARFFAAQEDPIDQTLLLGNVP 439
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ V+ D V++ A ++ VS I V V D ++ I
Sbjct: 440 VRVVGVVKKEAGAVGDASLLQVWVPYTTAMARMLGQSHVSSITVRVSDTVGMQAAEAAIG 499
Query: 246 RIL 248
R+L
Sbjct: 500 RLL 502
>gi|330860228|emb|CBX70547.1| macrolide export ATP-binding/permease protein macB [Yersinia
enterocolitica W22703]
Length = 407
Score = 42.8 bits (98), Expect = 0.055, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
+ +AWR L +R + +S +G++IG+ +++ M+V G R++++ + +
Sbjct: 160 AIKMAWRALLGHRIR------ALLSMLGIIIGISSVVSSMAVGEGARQEILNEISQLG 211
>gi|319900144|ref|YP_004159872.1| hypothetical protein Bache_0256 [Bacteroides helcogenes P 36-108]
gi|319415175|gb|ADV42286.1| protein of unknown function DUF214 [Bacteroides helcogenes P
36-108]
Length = 419
Score = 42.4 bits (97), Expect = 0.057, Method: Composition-based stats.
Identities = 29/225 (12%), Positives = 59/225 (26%), Gaps = 8/225 (3%)
Query: 20 RKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVD 79
++N + + + V G+ LIV++ NG + + + +
Sbjct: 13 KRNKLRTFLTGFA---VAWGIFMLIVLLGAGNGLIHAFEQNSSERALNSIRIFPGWTTKS 69
Query: 80 YQ--FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFY 137
Y + + + +S ++ + + Y
Sbjct: 70 YDGLKEGRNIQLDNKDLSATEKLFPDNVISAGATVRQSNVNINFGQEYVNISLLGVHPNY 129
Query: 138 GNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK---SYTVLGM 194
V G I DL I I K +G +G +
Sbjct: 130 TEVETVKTAGGRFINQNDLKDRRKIIILHKKTADILFGKSHTQPIGQFVNANGVAYQVVG 189
Query: 195 FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
D D Y+ Q + + +S I K+ ++E
Sbjct: 190 LYDDQGDRDANEAYIPFSTLQTIYGKGDKLSNIIFTTKNLSSMES 234
>gi|268591060|ref|ZP_06125281.1| macrolide efflux ABC transporter, permease/ATP-binding protein
[Providencia rettgeri DSM 1131]
gi|291313866|gb|EFE54319.1| macrolide efflux ABC transporter, permease/ATP-binding protein
[Providencia rettgeri DSM 1131]
Length = 657
Score = 42.4 bits (97), Expect = 0.057, Method: Composition-based stats.
Identities = 27/239 (11%), Positives = 71/239 (29%), Gaps = 9/239 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +R AF +S +G++IG+ +++ M+V G R ++ + +
Sbjct: 267 SIRMAWRALLGHRMRAF------LSMLGIIIGISSVVSSMAVGEGARRSIMDEIGKLGST 320
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + + R + DV + ++ SS V ++ +
Sbjct: 321 TLEIRPGTGWGAKRPDMERALSLNDVKSLKQLPWIESVSPVASSMTMVVNKGLDNSIMLN 380
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD-VTPMGMGIRS 186
+ + G + + + ++ + +G
Sbjct: 381 GVSEEYFAAQGFQLLHGSFFSTLDMADSEPVIVLDEGSREVLFQPEEEPLGQIVQIGHSP 440
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ M ++ Q + + I + P+ + +
Sbjct: 441 WRIIGIARKPGPKMSSGFVMGWVPYSSLQQRVVGDKPIEFISLRF--PENLTSQQAELQ 497
>gi|319639183|ref|ZP_07993934.1| macrolide export ATP-binding/permease macB [Neisseria mucosa C102]
gi|317399367|gb|EFV80037.1| macrolide export ATP-binding/permease macB [Neisseria mucosa C102]
Length = 645
Score = 42.4 bits (97), Expect = 0.057, Method: Composition-based stats.
Identities = 28/231 (12%), Positives = 79/231 (34%), Gaps = 4/231 (1%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG ++ +++ + + + + D + +
Sbjct: 269 SLLTMLGIIIGIASVVSVVALGNGSQQKILEDINSMGTNTISIFPGRGFGDRRSGRIKTL 328
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I D + + +SGG+ + + + G +
Sbjct: 329 TINDAKAISQQSYVASATPQTNSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLEEGRLFD 388
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ D + K + + + + + TV+G+ + + N
Sbjct: 389 DDDVKTDAQVVVIDQ-NTKTKLFGEGVNPLGKTILFKKRPLTVIGIMKKDDNSFGNSDSL 447
Query: 209 MSLQEAQLYFNL---ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
M + E+ + I V +KD + +++ +L D
Sbjct: 448 MLWSPYTTVMHQITGESYTNSIVVKIKDDANTQVAEKSLTELLKARHGTED 498
>gi|312878832|ref|ZP_07738632.1| protein of unknown function DUF214 [Aminomonas paucivorans DSM
12260]
gi|310782123|gb|EFQ22521.1| protein of unknown function DUF214 [Aminomonas paucivorans DSM
12260]
Length = 409
Score = 42.4 bits (97), Expect = 0.057, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
++VA R L +N S ++ +G++IGV A+I + +V G + +++ I H+
Sbjct: 8 LVVALRALKANALR------SALAMLGIVIGVGAVITMFAVGTGANRRVTEQISSIGSHL 61
Query: 69 VIQQ 72
++
Sbjct: 62 LVVM 65
>gi|319427619|gb|ADV55693.1| macrolide eflux system, ATPase and inner membrane subunit, MacB
[Shewanella putrefaciens 200]
Length = 647
Score = 42.4 bits (97), Expect = 0.057, Method: Composition-based stats.
Identities = 26/250 (10%), Positives = 79/250 (31%), Gaps = 7/250 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + ++R F ++ +G++IG+ +++ V+++ G + +++ + + +
Sbjct: 257 AFKMALLAMSTHRLRTF------LTMLGIIIGIASVVSVVALGEGSQREILNSISSMGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + + D + + + D + + + S + + +
Sbjct: 311 TIDIRPGFGFGDRRSGKVKTLIVKDADALKHLPYVDSVTPTVDSSMTLRYGNKAVTTVVN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ F R G + + K + +G
Sbjct: 371 GVGPEFFRVRGYELAMGQFWDEDSVSSLAQDAVIDDKVRKELFPRSSPIGEVIFIGNLPV 430
Query: 188 SYTVLGMF-RMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ F D+ V++ +N ++GI V + + + I+
Sbjct: 431 RIIGVTEPKDSVFGKSDSLNVWLPYTTLSGRIVGKNYLNGITVRLNESVPSNAAEQGIIT 490
Query: 247 ILGNGVVVID 256
+L + D
Sbjct: 491 LLKMRHGIED 500
>gi|120597604|ref|YP_962178.1| ABC transporter-like protein [Shewanella sp. W3-18-1]
gi|134048483|sp|A1RG29|MACB_SHESW RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|120557697|gb|ABM23624.1| ABC transporter related [Shewanella sp. W3-18-1]
Length = 647
Score = 42.4 bits (97), Expect = 0.057, Method: Composition-based stats.
Identities = 26/250 (10%), Positives = 79/250 (31%), Gaps = 7/250 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + ++R F ++ +G++IG+ +++ V+++ G + +++ + + +
Sbjct: 257 AFKMALLAMSTHRLRTF------LTMLGIIIGIASVVSVVALGEGSQREILNSISSMGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + + D + + + D + + + S + + +
Sbjct: 311 TIDIRPGFGFGDRRSGKVKTLIVKDADALKHLPYVDSVTPTVDSSMTLRYGNKAVTTVVN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ F R G + + K + +G
Sbjct: 371 GVGPEFFRVRGYELAMGQFWDEDSVSSLAQDAVIDDKVRKELFPRSSPIGEVIFIGNLPV 430
Query: 188 SYTVLGMF-RMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ F D+ V++ +N ++GI V + + + I+
Sbjct: 431 RIIGVTEPKDSVFGKSDSLNVWLPYTTLSGRIVGKNYLNGITVRLNESVPSNAAEQGIIT 490
Query: 247 ILGNGVVVID 256
+L + D
Sbjct: 491 LLKMRHGIED 500
>gi|146294257|ref|YP_001184681.1| ABC transporter-like protein [Shewanella putrefaciens CN-32]
gi|145565947|gb|ABP76882.1| ABC transporter related [Shewanella putrefaciens CN-32]
Length = 647
Score = 42.4 bits (97), Expect = 0.057, Method: Composition-based stats.
Identities = 26/250 (10%), Positives = 79/250 (31%), Gaps = 7/250 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + ++R F ++ +G++IG+ +++ V+++ G + +++ + + +
Sbjct: 257 AFKMALLAMSTHRLRTF------LTMLGIIIGIASVVSVVALGEGSQREILNSISSMGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + + D + + + D + + + S + + +
Sbjct: 311 TIDIRPGFGFGDRRSGKVKTLIVKDADALKHLPYVDSVTPTVDSSMTLRYGNKAVTTVVN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ F R G + + K + +G
Sbjct: 371 GVGPEFFRVRGYELAMGQFWDEDSVSSLAQDAVIDDKVRKELFPRSSPIGEVIFIGNLPV 430
Query: 188 SYTVLGMF-RMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ F D+ V++ +N ++GI V + + + I+
Sbjct: 431 RIIGVTEPKDSVFGKSDSLNVWLPYTTLSGRIVGKNYLNGITVRLNESVPSNAAEQGIIT 490
Query: 247 ILGNGVVVID 256
+L + D
Sbjct: 491 LLKMRHGIED 500
>gi|313677207|ref|YP_004055203.1| hypothetical protein Ftrac_3120 [Marivirga tractuosa DSM 4126]
gi|312943905|gb|ADR23095.1| protein of unknown function DUF214 [Marivirga tractuosa DSM 4126]
Length = 447
Score = 42.4 bits (97), Expect = 0.058, Method: Composition-based stats.
Identities = 10/51 (19%), Positives = 33/51 (64%), Gaps = 6/51 (11%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+A+ + +N+ +F ++ +G++ GV A+I ++++ NG +++++ ++
Sbjct: 11 IAFEAVVANKTRSF------LTALGIIFGVAAVIAMLAIGNGAQQEILNQI 55
>gi|325207592|gb|ADZ03044.1| macrolide export ATP-binding/permease protein MacB [Neisseria
meningitidis NZ-05/33]
Length = 644
Score = 42.4 bits (97), Expect = 0.058, Method: Composition-based stats.
Identities = 31/231 (13%), Positives = 76/231 (32%), Gaps = 5/231 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG ++ +++ + I + + D + +
Sbjct: 269 SLLTMLGIIIGIASVVSVVALGNGSQKKILEDISSIGTNTISIFPGRGFGDRRSGRIKTL 328
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I D + + SSGG+ + + + G
Sbjct: 329 TIDDAKIIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFD 388
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ +D + + R + TV+G+ + + N V
Sbjct: 389 ENDVKEDAQVVVIDQNVKDKLFADSDPLGKTI--LFRKRPLTVIGVMKKDENAFGNSDVL 446
Query: 209 MSLQEAQLYFNL---ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
M + E+ + I V +KD + + + +L D
Sbjct: 447 MLWSPYTTVMHQITGESHTNSITVKIKDNANTQVAEKGLTDLLKARHGTED 497
>gi|325202662|gb|ADY98116.1| macrolide export ATP-binding/permease protein MacB [Neisseria
meningitidis M01-240149]
gi|325203640|gb|ADY99093.1| macrolide export ATP-binding/permease protein MacB [Neisseria
meningitidis M01-240355]
Length = 644
Score = 42.4 bits (97), Expect = 0.058, Method: Composition-based stats.
Identities = 31/231 (13%), Positives = 76/231 (32%), Gaps = 5/231 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG ++ +++ + I + + D + +
Sbjct: 269 SLLTMLGIIIGIASVVSVVALGNGSQKKILEDISSIGTNTISIFPGRGFGDRRSGRIKTL 328
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I D + + SSGG+ + + + G
Sbjct: 329 TIDDAKIIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFD 388
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ +D + + R + TV+G+ + + N V
Sbjct: 389 ENDVKEDAQVVVIDQNVKDKLFADSDPLGKTI--LFRKRPLTVIGVMKKDENAFGNSDVL 446
Query: 209 MSLQEAQLYFNL---ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
M + E+ + I V +KD + + + +L D
Sbjct: 447 MLWSPYTTVMHQITGESHTNSITVKIKDNANTQVAEKGLTDLLKARHGTED 497
>gi|325200763|gb|ADY96218.1| macrolide export ATP-binding/permease protein MacB [Neisseria
meningitidis H44/76]
Length = 642
Score = 42.4 bits (97), Expect = 0.058, Method: Composition-based stats.
Identities = 31/231 (13%), Positives = 76/231 (32%), Gaps = 5/231 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG ++ +++ + I + + D + +
Sbjct: 267 SLLTMLGIIIGIASVVSVVALGNGSQKKILEDISSIGTNTISIFPGRGFGDRRSGRIKTL 326
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I D + + SSGG+ + + + G
Sbjct: 327 TIDDAKIIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFD 386
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ +D + + R + TV+G+ + + N V
Sbjct: 387 ENDVKEDAQVVVIDQNVKDKLFADSDPLGKTI--LFRKRPLTVIGVMKKDENAFGNSDVL 444
Query: 209 MSLQEAQLYFNL---ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
M + E+ + I V +KD + + + +L D
Sbjct: 445 MLWSPYTTVMHQITGESHTNSITVKIKDNANTQVAEKGLTDLLKARHGTED 495
>gi|325143890|gb|EGC66202.1| macrolide export ATP-binding/permease protein MacB [Neisseria
meningitidis M01-240013]
Length = 642
Score = 42.4 bits (97), Expect = 0.058, Method: Composition-based stats.
Identities = 31/231 (13%), Positives = 76/231 (32%), Gaps = 5/231 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG ++ +++ + I + + D + +
Sbjct: 267 SLLTMLGIIIGIASVVSVVALGNGSQKKILEDISSIGTNTISIFPGRGFGDRRSGRIKTL 326
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I D + + SSGG+ + + + G
Sbjct: 327 TIDDAKIIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFD 386
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ +D + + R + TV+G+ + + N V
Sbjct: 387 ENDVKEDAQVVVIDQNVKDKLFADSDPLGKTI--LFRKRPLTVIGVMKKDENAFGNSDVL 444
Query: 209 MSLQEAQLYFNL---ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
M + E+ + I V +KD + + + +L D
Sbjct: 445 MLWSPYTTVMHQITGESHTNSITVKIKDNANTQVAEKGLTDLLKARHGTED 495
>gi|325141771|gb|EGC64222.1| macrolide export ATP-binding/permease protein MacB [Neisseria
meningitidis 961-5945]
gi|325197761|gb|ADY93217.1| macrolide export ATP-binding/permease protein MacB [Neisseria
meningitidis G2136]
Length = 644
Score = 42.4 bits (97), Expect = 0.058, Method: Composition-based stats.
Identities = 31/231 (13%), Positives = 76/231 (32%), Gaps = 5/231 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG ++ +++ + I + + D + +
Sbjct: 269 SLLTMLGIIIGIASVVSVVALGNGSQKKILEDISSIGTNTISIFPGRGFGDRRSGRIKTL 328
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I D + + SSGG+ + + + G
Sbjct: 329 TIDDAKIIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFD 388
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ +D + + R + TV+G+ + + N V
Sbjct: 389 ENDVKEDAQVVVIDQNVKDKLFADSDPLGKTI--LFRKRPLTVIGVMKKDENAFGNSDVL 446
Query: 209 MSLQEAQLYFNL---ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
M + E+ + I V +KD + + + +L D
Sbjct: 447 MLWSPYTTVMHQITGESHTNSITVKIKDNANTQVAEKGLTDLLKARHGTED 497
>gi|325139798|gb|EGC62331.1| macrolide export ATP-binding/permease protein MacB [Neisseria
meningitidis CU385]
Length = 642
Score = 42.4 bits (97), Expect = 0.058, Method: Composition-based stats.
Identities = 31/231 (13%), Positives = 76/231 (32%), Gaps = 5/231 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG ++ +++ + I + + D + +
Sbjct: 267 SLLTMLGIIIGIASVVSVVALGNGSQKKILEDISSIGTNTISIFPGRGFGDRRSGRIKTL 326
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I D + + SSGG+ + + + G
Sbjct: 327 TIDDAKIIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFD 386
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ +D + + R + TV+G+ + + N V
Sbjct: 387 ENDVKEDAQVVVIDQNVKDKLFADSDPLGKTI--LFRKRPLTVIGVMKKDENAFGNSDVL 444
Query: 209 MSLQEAQLYFNL---ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
M + E+ + I V +KD + + + +L D
Sbjct: 445 MLWSPYTTVMHQITGESHTNSITVKIKDNANTQVAEKGLTDLLKARHGTED 495
>gi|325133935|gb|EGC56591.1| macrolide export ATP-binding/permease protein MacB [Neisseria
meningitidis M13399]
Length = 644
Score = 42.4 bits (97), Expect = 0.058, Method: Composition-based stats.
Identities = 31/231 (13%), Positives = 76/231 (32%), Gaps = 5/231 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG ++ +++ + I + + D + +
Sbjct: 269 SLLTMLGIIIGIASVVSVVALGNGSQKKILEDISSIGTNTISIFPGRGFGDRRSGRIKTL 328
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I D + + SSGG+ + + + G
Sbjct: 329 TIDDAKIIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFD 388
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ +D + + R + TV+G+ + + N V
Sbjct: 389 ENDVKEDAQVVVIDQNVKDKLFADSDPLGKTI--LFRKRPLTVIGVMKKDENAFGNSDVL 446
Query: 209 MSLQEAQLYFNL---ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
M + E+ + I V +KD + + + +L D
Sbjct: 447 MLWSPYTTVMHQITGESHTNSITVKIKDNANTQVAEKGLTDLLKARHGTED 497
>gi|325129699|gb|EGC52512.1| macrolide export ATP-binding/permease protein MacB [Neisseria
meningitidis OX99.30304]
Length = 644
Score = 42.4 bits (97), Expect = 0.058, Method: Composition-based stats.
Identities = 31/231 (13%), Positives = 76/231 (32%), Gaps = 5/231 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG ++ +++ + I + + D + +
Sbjct: 269 SLLTMLGIIIGIASVVSVVALGNGSQKKILEDISSIGTNTISIFPGRGFGDRRSGRIKTL 328
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I D + + SSGG+ + + + G
Sbjct: 329 TIDDAKIIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFD 388
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ +D + + R + TV+G+ + + N V
Sbjct: 389 ENDVKEDAQVVVIDQNVKDKLFADSDPLGKTI--LFRKRPLTVIGVMKKDENAFGNSDVL 446
Query: 209 MSLQEAQLYFNL---ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
M + E+ + I V +KD + + + +L D
Sbjct: 447 MLWSPYTTVMHQITGESHTNSITVKIKDNANTQVAEKGLTDLLKARHGTED 497
>gi|325127649|gb|EGC50564.1| macrolide export ATP-binding/permease protein MacB [Neisseria
meningitidis N1568]
Length = 642
Score = 42.4 bits (97), Expect = 0.058, Method: Composition-based stats.
Identities = 31/231 (13%), Positives = 76/231 (32%), Gaps = 5/231 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG ++ +++ + I + + D + +
Sbjct: 267 SLLTMLGIIIGIASVVSVVALGNGSQKKILEDISSIGTNTISIFPGRGFGDRRSGRIKTL 326
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I D + + SSGG+ + + + G
Sbjct: 327 TIDDAKIIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFD 386
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ +D + + R + TV+G+ + + N V
Sbjct: 387 ENDVKEDAQVVVIDQNVKDKLFADSDPLGKTI--LFRKRPLTVIGVMKKDENAFGNSDVL 444
Query: 209 MSLQEAQLYFNL---ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
M + E+ + I V +KD + + + +L D
Sbjct: 445 MLWSPYTTVMHQITGESHTNSITVKIKDNANTQVAEKGLTDLLKARHGTED 495
>gi|308388734|gb|ADO31054.1| ABC transporter ATP-binding protein [Neisseria meningitidis
alpha710]
Length = 644
Score = 42.4 bits (97), Expect = 0.058, Method: Composition-based stats.
Identities = 31/231 (13%), Positives = 76/231 (32%), Gaps = 5/231 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG ++ +++ + I + + D + +
Sbjct: 269 SLLTMLGIIIGIASVVSVVALGNGSQKKILEDISSIGTNTISIFPGRGFGDRRSGRIKTL 328
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I D + + SSGG+ + + + G
Sbjct: 329 TIDDAKIIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFD 388
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ +D + + R + TV+G+ + + N V
Sbjct: 389 ENDVKEDAQVVVIDQNVKDKLFADSDPLGKTI--LFRKRPLTVIGVMKKDENAFGNSDVL 446
Query: 209 MSLQEAQLYFNL---ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
M + E+ + I V +KD + + + +L D
Sbjct: 447 MLWSPYTTVMHQITGESHTNSITVKIKDNANTQVAEKGLTDLLKARHGTED 497
>gi|254804433|ref|YP_003082654.1| putative ABC transporter, ATP-binding protein [Neisseria
meningitidis alpha14]
gi|254667975|emb|CBA04262.1| putative ABC transporter, ATP-binding protein [Neisseria
meningitidis alpha14]
gi|261393080|emb|CAX50677.1| putative ABC transporter ATP-binding protein [Neisseria
meningitidis 8013]
Length = 644
Score = 42.4 bits (97), Expect = 0.058, Method: Composition-based stats.
Identities = 31/231 (13%), Positives = 76/231 (32%), Gaps = 5/231 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG ++ +++ + I + + D + +
Sbjct: 269 SLLTMLGIIIGIASVVSVVALGNGSQKKILEDISSIGTNTISIFPGRGFGDRRSGRIKTL 328
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I D + + SSGG+ + + + G
Sbjct: 329 TIDDAKIIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFD 388
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ +D + + R + TV+G+ + + N V
Sbjct: 389 ENDVKEDAQVVVIDQNVKDKLFADSDPLGKTI--LFRKRPLTVIGVMKKDENAFGNSDVL 446
Query: 209 MSLQEAQLYFNL---ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
M + E+ + I V +KD + + + +L D
Sbjct: 447 MLWSPYTTVMHQITGESHTNSITVKIKDNANTQVAEKGLTDLLKARHGTED 497
>gi|161869479|ref|YP_001598646.1| macrolide transport system ATP-binding protein [Neisseria
meningitidis 053442]
gi|304388223|ref|ZP_07370343.1| ABC superfamily ATP binding cassette transporter, ABC/membrane
protein [Neisseria meningitidis ATCC 13091]
gi|161595032|gb|ABX72692.1| macrolide transport system ATP-binding protein [Neisseria
meningitidis 053442]
gi|304337750|gb|EFM03899.1| ABC superfamily ATP binding cassette transporter, ABC/membrane
protein [Neisseria meningitidis ATCC 13091]
gi|325135861|gb|EGC58473.1| macrolide export ATP-binding/permease protein MacB [Neisseria
meningitidis M0579]
gi|325206599|gb|ADZ02052.1| macrolide export ATP-binding/permease protein MacB [Neisseria
meningitidis M04-240196]
Length = 644
Score = 42.4 bits (97), Expect = 0.058, Method: Composition-based stats.
Identities = 31/231 (13%), Positives = 76/231 (32%), Gaps = 5/231 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG ++ +++ + I + + D + +
Sbjct: 269 SLLTMLGIIIGIASVVSVVALGNGSQKKILEDISSIGTNTISIFPGRGFGDRRSGRIKTL 328
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I D + + SSGG+ + + + G
Sbjct: 329 TIDDAKIIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFD 388
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ +D + + R + TV+G+ + + N V
Sbjct: 389 ENDVKEDAQVVVIDQNVKDKLFADSDPLGKTI--LFRKRPLTVIGVMKKDENAFGNSDVL 446
Query: 209 MSLQEAQLYFNL---ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
M + E+ + I V +KD + + + +L D
Sbjct: 447 MLWSPYTTVMHQITGESHTNSITVKIKDNANTQVAEKGLTDLLKARHGTED 497
>gi|145591287|ref|YP_001153289.1| hypothetical protein Pars_1059 [Pyrobaculum arsenaticum DSM 13514]
gi|145283055|gb|ABP50637.1| protein of unknown function DUF214 [Pyrobaculum arsenaticum DSM
13514]
Length = 401
Score = 42.4 bits (97), Expect = 0.058, Method: Composition-based stats.
Identities = 29/242 (11%), Positives = 71/242 (29%), Gaps = 14/242 (5%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +AW+ L+ + + + +GV+I AL + + F++++
Sbjct: 6 LRLAWQALWERKGR------TIGAVVGVVIAFTALSYALLLGQTFKDNVAHYFTSN---- 55
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
Q ++ QF + I + V V + + G+
Sbjct: 56 -FQMNVLYVMGSQFTDADVSTISTISGVELAVPITSARGAVRVPGTSGQTPVTVYGVPPS 114
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
L + + G + + + ++ + SP +G +
Sbjct: 115 LISQVLPPTSLYDGELIVGSNLAMVGYYVAFDRSTGQQRVAVGSPL--SLAIGRRSTTVV 172
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ + V M + + + + + V++KD I+ I
Sbjct: 173 ASGIMATGALGFVDTTRGVVMDINTFRQLTGI-TTYNLVMVYLKDVSQIDAVSNEIKANF 231
Query: 249 GN 250
N
Sbjct: 232 PN 233
>gi|121634344|ref|YP_974589.1| putative ABC transporter ATP-binding protein [Neisseria
meningitidis FAM18]
gi|120866050|emb|CAM09788.1| putative ABC transporter ATP-binding protein [Neisseria
meningitidis FAM18]
gi|325131777|gb|EGC54478.1| macrolide export ATP-binding/permease protein MacB [Neisseria
meningitidis M6190]
Length = 644
Score = 42.4 bits (97), Expect = 0.058, Method: Composition-based stats.
Identities = 31/231 (13%), Positives = 76/231 (32%), Gaps = 5/231 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG ++ +++ + I + + D + +
Sbjct: 269 SLLTMLGIIIGIASVVSVVALGNGSQKKILEDISSIGTNTISIFPGRGFGDRRSGRIKTL 328
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I D + + SSGG+ + + + G
Sbjct: 329 TIDDAKIIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFD 388
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ +D + + R + TV+G+ + + N V
Sbjct: 389 ENDVKEDAQVVVIDQNVKDKLFADSDPLGKTI--LFRKRPLTVIGVMKKDENAFGNSDVL 446
Query: 209 MSLQEAQLYFNL---ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
M + E+ + I V +KD + + + +L D
Sbjct: 447 MLWSPYTTVMHQITGESHTNSITVKIKDNANTQVAEKGLTDLLKARHGTED 497
>gi|15676455|ref|NP_273594.1| ABC transporter, ATP-binding protein [Neisseria meningitidis MC58]
gi|81784931|sp|Q9K0N7|MACB_NEIMB RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|7225775|gb|AAF40978.1| ABC transporter, ATP-binding protein [Neisseria meningitidis MC58]
gi|316985412|gb|EFV64360.1| macrolide export ATP-binding/permease protein macB [Neisseria
meningitidis H44/76]
Length = 644
Score = 42.4 bits (97), Expect = 0.058, Method: Composition-based stats.
Identities = 31/231 (13%), Positives = 76/231 (32%), Gaps = 5/231 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG ++ +++ + I + + D + +
Sbjct: 269 SLLTMLGIIIGIASVVSVVALGNGSQKKILEDISSIGTNTISIFPGRGFGDRRSGRIKTL 328
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I D + + SSGG+ + + + G
Sbjct: 329 TIDDAKIIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFD 388
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ +D + + R + TV+G+ + + N V
Sbjct: 389 ENDVKEDAQVVVIDQNVKDKLFADSDPLGKTI--LFRKRPLTVIGVMKKDENAFGNSDVL 446
Query: 209 MSLQEAQLYFNL---ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
M + E+ + I V +KD + + + +L D
Sbjct: 447 MLWSPYTTVMHQITGESHTNSITVKIKDNANTQVAEKGLTDLLKARHGTED 497
>gi|297564698|ref|YP_003683670.1| hypothetical protein Mesil_0218 [Meiothermus silvanus DSM 9946]
gi|296849147|gb|ADH62162.1| protein of unknown function DUF214 [Meiothermus silvanus DSM 9946]
Length = 379
Score = 42.4 bits (97), Expect = 0.059, Method: Composition-based stats.
Identities = 18/241 (7%), Positives = 71/241 (29%), Gaps = 17/241 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ + +R L + S ++ +G+++ ++++ +S G R + + + +
Sbjct: 4 LALVYRNLRARPVR------SILTLLGIVVSTASMVLFLSFGEGLRRALGSELSSVGPAI 57
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
++ + + + D + + + + + ++ F
Sbjct: 58 LVLPEGVEAISPGYPELGPDTVRKLEGLAGELGIT----------QVIPYVVLTRGGFDP 107
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ + ++ + + + + + + +
Sbjct: 108 QSTFIFQGLPDGTSPKTLYPHLTVSQGALTPSPRGAVVGSRVAERSQLTLGKTLRLSPRI 167
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ + ++Y+S N +N + I V V++ E + I +
Sbjct: 168 SLQVEGILQPVGGLSDSVIYVSASAVHAALNTQN-YTSIAVSVREGRKAEDVAKAIQERI 226
Query: 249 G 249
Sbjct: 227 P 227
>gi|254671455|emb|CBA08989.1| ABC transporter, nucleotide binding/ATPase protein [Neisseria
meningitidis alpha153]
Length = 610
Score = 42.4 bits (97), Expect = 0.059, Method: Composition-based stats.
Identities = 31/231 (13%), Positives = 76/231 (32%), Gaps = 5/231 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG ++ +++ + I + + D + +
Sbjct: 235 SLLTMLGIIIGIASVVSVVALGNGSQKKILEDISSIGTNTISIFPGRGFGDRRSGRIKTL 294
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I D + + SSGG+ + + + G
Sbjct: 295 TIDDAKIIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFD 354
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ +D + + R + TV+G+ + + N V
Sbjct: 355 ENDVKEDAQVVVIDQNVKDKLFADSDPLGKTI--LFRKRPLTVIGVMKKDENAFGNSDVL 412
Query: 209 MSLQEAQLYFNL---ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
M + E+ + I V +KD + + + +L D
Sbjct: 413 MLWSPYTTVMHQITGESHTNSITVKIKDNANTQVAEKGLTDLLKARHGTED 463
>gi|241758549|ref|ZP_04756666.1| macrolide export ATP-binding/permease protein MacB [Neisseria
flavescens SK114]
gi|241321292|gb|EER57452.1| macrolide export ATP-binding/permease protein MacB [Neisseria
flavescens SK114]
Length = 645
Score = 42.4 bits (97), Expect = 0.059, Method: Composition-based stats.
Identities = 28/231 (12%), Positives = 78/231 (33%), Gaps = 4/231 (1%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG ++ +++ + + + + D + +
Sbjct: 269 SLLTMLGIIIGIASVVSVVALGNGSQQKILEDINSMGTNTISIFPGRGFGDRRSGRIKTL 328
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I D + + +S G+ + + + G +
Sbjct: 329 TINDAKAISQQSYVASATPQTNSSGTLTYRNTDLTASLYGVGEQYFDVRGLKLEEGRLFD 388
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ D + K + D + + + TV+G+ + + N
Sbjct: 389 DDDVKTDAQVVVIDQ-NTKTKLFGEGVDPLGKTILFKKRPLTVIGIMKKDDNSFGNSDSL 447
Query: 209 MSLQEAQLYFNL---ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
M + E+ + I V +KD + +++ +L D
Sbjct: 448 MLWSPYTTVMHQITGESHTNSIVVKIKDDANTQVAEKSLTELLKARHGTED 498
>gi|319409927|emb|CBY90252.1| putative ABC transporter ATP-binding protein [Neisseria
meningitidis WUE 2594]
Length = 644
Score = 42.4 bits (97), Expect = 0.060, Method: Composition-based stats.
Identities = 31/231 (13%), Positives = 76/231 (32%), Gaps = 5/231 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG ++ +++ + I + + D + +
Sbjct: 269 SLLTMLGIIIGIASVVSVVALGNGSQKKILEDISSIGTNTISIFPGRGFGDRRSGRIKTL 328
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I D + + SSGG+ + + + G
Sbjct: 329 TIDDAKIIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFD 388
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ +D + + R + TV+G+ + + N V
Sbjct: 389 ENDVKEDAQVVVIDQNVKDKLFADSDPLGKTI--LFRKRPLTVIGVMKKDENAFGNSDVL 446
Query: 209 MSLQEAQLYFNL---ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
M + E+ + I V +KD + + + +L D
Sbjct: 447 MLWSPYTTVMHQITGESHTNSITVKIKDNANTQVAEKGLTDLLKARHGTED 497
>gi|33240372|ref|NP_875314.1| putative ABC transporter [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
gi|33237899|gb|AAP99966.1| ABC-type antimicrobial peptide transport system permease component
[Prochlorococcus marinus subsp. marinus str. CCMP1375]
Length = 409
Score = 42.4 bits (97), Expect = 0.060, Method: Composition-based stats.
Identities = 34/259 (13%), Positives = 77/259 (29%), Gaps = 22/259 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+++ + L +N+ S ++ +G++IG ++I ++ V G ++ ++ + +V
Sbjct: 11 FLMSLKTLKANKLR------SSLTMLGIIIGNASVITLLGVGKGAQKLASNQLSNLGANV 64
Query: 69 VIQQKYYPL-------VDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ I + + V+ Q S + S +
Sbjct: 65 LFVVPGNNNTRRRGVAFPRNLTLRDAIAIEQQVPTIEKVAPQISSSEVIQYESKSFSSTV 124
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+LQ G + L + + IN L +
Sbjct: 125 LGVTPDFLQVRSFDIAKGRFISEKDNNGAKNVAIIGHELNQDLFNNINSLGKNLRIKDQS 184
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN-----AVSGIEVFVKDPDA 236
+ +F +Y+ L ++ ++S I + KD A
Sbjct: 185 FQVIGVMEPKGAVFGSNQDK----NIYIPLTTMVNRITGKDPTYGVSLSFISIQAKDARA 240
Query: 237 IEKTHENIVRILGNGVVVI 255
I I +L +I
Sbjct: 241 INAAKFQITNLLRQRHNII 259
>gi|218767671|ref|YP_002342183.1| putative ABC transporter ATP-binding protein [Neisseria
meningitidis Z2491]
gi|81543047|sp|Q9JVR5|MACB_NEIMA RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|121051679|emb|CAM07982.1| putative ABC transporter ATP-binding protein [Neisseria
meningitidis Z2491]
Length = 644
Score = 42.4 bits (97), Expect = 0.060, Method: Composition-based stats.
Identities = 31/231 (13%), Positives = 76/231 (32%), Gaps = 5/231 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG ++ +++ + I + + D + +
Sbjct: 269 SLLTMLGIIIGIASVVSVVALGNGSQKKILEDISSIGTNTISIFPGRGFGDRRSGRIKTL 328
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I D + + SSGG+ + + + G
Sbjct: 329 TIDDAKIIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFD 388
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ +D + + R + TV+G+ + + N V
Sbjct: 389 ENDVKEDAQVVVIDQNVKDKLFADSDPLGKTI--LFRKRPLTVIGVMKKDENAFGNSDVL 446
Query: 209 MSLQEAQLYFNL---ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
M + E+ + I V +KD + + + +L D
Sbjct: 447 MLWSPYTTVMHQITGESHTNSITVKIKDNANTQVAEKGLTDLLKARHGTED 497
>gi|241889748|ref|ZP_04777046.1| ABC transporter, permease protein [Gemella haemolysans ATCC 10379]
gi|241863370|gb|EER67754.1| ABC transporter, permease protein [Gemella haemolysans ATCC 10379]
Length = 419
Score = 42.4 bits (97), Expect = 0.061, Method: Composition-based stats.
Identities = 33/261 (12%), Positives = 78/261 (29%), Gaps = 6/261 (2%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMS----VMNGFRED 56
MSIF+R + + + + S+ +++ SF G ++ + + V GF +
Sbjct: 1 MSIFNRAYLYIIRKKVRSSILFLIVTLISFFLLSGSVLNTTVNNISKNLYKDVNFGFNIE 60
Query: 57 MIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
+ +++ + K + + ++ S +
Sbjct: 61 SADKSNKEIEKDTLKKIEELKGISTKNYIFSKPVVVEGKKVVQENQNITLNDEMKNKSNL 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
++ + S + + I ++ I
Sbjct: 121 VMMNGITASKSNIDFKSEVLKLEKGRHIEENDKNKIMIHEKFAELNNVNLGDKIKLSQEG 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL--ENAVSGIEVFVKDP 234
+ S F D+ VY + +Q NL N V+ +E V+DP
Sbjct: 181 KILELEIVGIYSGDKTNTFNGLSSDFIENTVYTDYKSSQELSNLIANNKVTSVEYGVEDP 240
Query: 235 DAIEKTHENIVRILGNGVVVI 255
++ + + + N ++V
Sbjct: 241 TKLDDVIKAVENLGINNLMVS 261
>gi|298206812|ref|YP_003714991.1| ABC transporter, permease protein, putative [Croceibacter
atlanticus HTCC2559]
gi|83849446|gb|EAP87314.1| ABC transporter, permease protein, putative [Croceibacter
atlanticus HTCC2559]
Length = 419
Score = 42.4 bits (97), Expect = 0.061, Method: Composition-based stats.
Identities = 31/241 (12%), Positives = 67/241 (27%), Gaps = 14/241 (5%)
Query: 27 IASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANR 86
+ ++ GV+ G+ L+V+++ G + GI + + Y+ +
Sbjct: 19 FRTILTAFGVLWGIFILVVLLAAGKGLENGVKSDFGGIATNTMFMWTQGISKPYKGLPKG 78
Query: 87 LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDR 146
F V + S + + G +N+ L+ YG+ +
Sbjct: 79 RQFNYKTDDV-QAIRDNVPNLRFISPRNQLGGFGGTNNVVRGLKTGAFNVYGDYPEIIQQ 137
Query: 147 GKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFP------ 200
I I K+ I+ G +
Sbjct: 138 EPMDITSGRFINYGDIEEKRKVAIIGEGVKTAMYGFAEDPLGTYIKINGVNFMVIGTYKK 197
Query: 201 -------DYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVV 253
+ + +Y+ FN N V + + +D +I + I +L
Sbjct: 198 KGGNGDAEEEQKQIYVPFTTFSQAFNRGNNVGWMAITAEDGSSITEIKPQIFELLKERHT 257
Query: 254 V 254
+
Sbjct: 258 I 258
>gi|227538897|ref|ZP_03968946.1| ABC superfamily ATP binding cassette transporter permease
[Sphingobacterium spiritivorum ATCC 33300]
gi|227241406|gb|EEI91421.1| ABC superfamily ATP binding cassette transporter permease
[Sphingobacterium spiritivorum ATCC 33300]
Length = 799
Score = 42.4 bits (97), Expect = 0.061, Method: Composition-based stats.
Identities = 29/244 (11%), Positives = 64/244 (26%), Gaps = 2/244 (0%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+AWR L N+ +F+SI S I + I+ + F + + V G+
Sbjct: 6 FKLAWRNLLKNKTTSFVSIVSLALGICCFFLLGTYIINELRFDSFHKKADRIVFMSFGYK 65
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
++ + + A F ++ V S + + +
Sbjct: 66 APSEEEFTETPWTPNAAVPAFAEQFPEIEKGVRLYKRGSEEHKVPVQYKGKVFNEDGLVF 125
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
F + + + + + + +T +
Sbjct: 126 ADEPFFDVFSFDFIKGNPAVALKEPNSIVITESTAKRYFGEEEALGESLTMNNTPWKVTG 185
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ G + + + + N +S + +K PD I I L
Sbjct: 186 VIKDIPSYSQIQFNIIGPYHSLSRFKNVSWGAANDISYL--LLKSPDDIAAVQSKIDNYL 243
Query: 249 GNGV 252
Sbjct: 244 KEQF 247
>gi|183393195|gb|ACC61760.1| ABC-type antimicrobial peptide transport system permease
component [Lactobacillus rhamnosus HN001]
Length = 68
Score = 42.4 bits (97), Expect = 0.062, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 31/47 (65%), Gaps = 6/47 (12%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFRE 55
+ +++R L +N++ +F ++ +G++IG+ +++ ++S+ NG +
Sbjct: 7 IRISFRALAANKRRSF------LTMLGIIIGIASVVTILSLGNGIKA 47
>gi|329919749|ref|ZP_08276700.1| efflux ABC transporter, permease protein [Lactobacillus iners SPIN
1401G]
gi|328937096|gb|EGG33524.1| efflux ABC transporter, permease protein [Lactobacillus iners SPIN
1401G]
Length = 813
Score = 42.4 bits (97), Expect = 0.062, Method: Composition-based stats.
Identities = 29/242 (11%), Positives = 71/242 (29%), Gaps = 19/242 (7%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
F + + R +F + F ++ +G+ L++ + + + +E + I
Sbjct: 436 SFSLKITARNVFRFKSRMF------MTILGIAGCCALLVMGLGIRDSLKEIADTQYGDII 489
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+ +I + + + V + +
Sbjct: 490 KYDLIALHNHQIPQNNSHYQSIINDNYVKRHTYINYKVCHTKQPHKFIDSNIQVITFADK 549
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ R N G II + LA+ + + +GDK+ Y
Sbjct: 550 NVLKKYFDLRNRKNKERYLLNSSGAIINEKLAKIMHVKVGDKLTFKDNYN---------- 599
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+T Y ++M+ + Q F + + +K + K +E ++
Sbjct: 600 ---HTKKVTISHICEMYLGHYLFMNRKTYQKVFQTSYTSNADMISLKSHKDLNKFNEKLL 656
Query: 246 RI 247
+
Sbjct: 657 KT 658
>gi|156740288|ref|YP_001430417.1| hypothetical protein Rcas_0266 [Roseiflexus castenholzii DSM
13941]
gi|156231616|gb|ABU56399.1| protein of unknown function DUF214 [Roseiflexus castenholzii DSM
13941]
Length = 414
Score = 42.4 bits (97), Expect = 0.062, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+F ++ A L +N S ++ +G++IG L+ V+S+ N + + +R
Sbjct: 1 MFKELALM-AVDSLRAN------MFRSLLTMLGIIIGSATLVAVLSLGNALQSQVFERF 52
>gi|261378036|ref|ZP_05982609.1| macrolide export ATP-binding/permease protein MacB [Neisseria
cinerea ATCC 14685]
gi|269145912|gb|EEZ72330.1| macrolide export ATP-binding/permease protein MacB [Neisseria
cinerea ATCC 14685]
Length = 644
Score = 42.4 bits (97), Expect = 0.063, Method: Composition-based stats.
Identities = 28/245 (11%), Positives = 77/245 (31%), Gaps = 6/245 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG ++ +++ + + + + D + +
Sbjct: 269 SLLTMLGIIIGIASVVSVVALGNGSQKKILEDISSMGTNTISIFPGRGFGDRRSGRIKTL 328
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
+ D + + +SGG+ + + + G
Sbjct: 329 TVDDAKIIAKQSYVASVTPQTTSGGTLTYRNTDLTASLYGVGEQYFDVLGLKLETGRLFD 388
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ +D + + R + TV+G+ + + N
Sbjct: 389 ENDVKEDAQVVVIDQNVKNKLFADSNPLGQT--VLFRKRPLTVIGVMKKDEDSFGNSEAL 446
Query: 209 MSLQEAQLYFNL---ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQ-IF 264
M + E+ + I V +KD + + + +L D+
Sbjct: 447 MLWSPYTTVMHQITGESHTNSITVKIKDNANTQVAEKGLTELLKVRHGTEDFFMNNSDSI 506
Query: 265 FSCYE 269
E
Sbjct: 507 MKMVE 511
>gi|218508855|ref|ZP_03506733.1| putative ABC transporter, permease protein [Rhizobium etli Brasil
5]
Length = 165
Score = 42.4 bits (97), Expect = 0.063, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 3 IFSRFE-VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+F FE + +A R + N +F ++ +GV+IGV A+I ++++ NG + +
Sbjct: 1 MF--FETLKLALRAISRNMLRSF------LTVLGVVIGVAAVIALVTIGNGTTAQVSTEL 52
Query: 62 LGINGHVVI 70
+ +++
Sbjct: 53 SRLGTNMLF 61
>gi|77919968|ref|YP_357783.1| ABC transporter permease [Pelobacter carbinolicus DSM 2380]
gi|77546051|gb|ABA89613.1| ABC-type transport system, permease component [Pelobacter
carbinolicus DSM 2380]
Length = 409
Score = 42.4 bits (97), Expect = 0.063, Method: Composition-based stats.
Identities = 35/271 (12%), Positives = 73/271 (26%), Gaps = 23/271 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+I+AW+ L+ NR+ + I++ AL V + +M GF + +
Sbjct: 4 LILAWKNLWRNRRRSVITLI-------------ALSVSLMLMQGFHNLAVGSYARMVDSG 50
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
V + + D + + L +S S
Sbjct: 51 VRAGSGHIALYRGDYHRSRDEVLTFEAADLIEQLTGMDEITHALPRVYLPGLAQSSRESR 110
Query: 129 ---LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
L V+ + + L + + L +
Sbjct: 111 GILLTGIDPAREYAVNPFLQHLPPSTMPQSLESRDALLGSRLASELQLSEGNKFVITAQN 170
Query: 186 SKSYTVLGMF------RMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+ + +F D DN +V + A + + + + DA
Sbjct: 171 RQGDLISELFRVRGVVHTGLRDVDNSLVMVGWHRAAAMGGFPRQIHELALILTRADAEAT 230
Query: 240 THENIVRIL-GNGVVVIDWQQRYQIFFSCYE 269
++R+L + V I W + +
Sbjct: 231 VMPQLLRLLQNSAVQAIAWDEAMPNLADSIK 261
>gi|319899425|ref|YP_004159522.1| ATP-binding protein of ABC transporter [Bartonella clarridgeiae 73]
gi|319403393|emb|CBI76961.1| ATP-binding protein of ABC transporter [Bartonella clarridgeiae 73]
Length = 660
Score = 42.4 bits (97), Expect = 0.064, Method: Composition-based stats.
Identities = 32/256 (12%), Positives = 80/256 (31%), Gaps = 14/256 (5%)
Query: 1 MSIFSRF------EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFR 54
M IF ++A + ++R F ++ +GV+IG+ +++ ++++ NG +
Sbjct: 256 MGIFRALMGRFREAFVMALLAMNAHRMRTF------LTMLGVIIGISSVVAMVALGNGTQ 309
Query: 55 EDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
+ +++ + + + L D Q D + S +S
Sbjct: 310 KKILENLKSFGTNTLTILPGKSLSDPQSGKITSLVEADAEALSELPYVAGVTSQISVNSM 369
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ + + F + G + + + +
Sbjct: 370 VYCDAIETKAVVVGVGEQFFQIQGLKVIKGRLFDQSSVRDRAVDLIIEKEALAVLFPNGQ 429
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFP--DYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK 232
+ + + + ++G+ + D +Y+ Q F V I + V
Sbjct: 430 ENPIGKIIRMGNVPARIIGVVDSQNHGGVSDTIQIYLPYTTVQTRFLGRTDVRAIILQVA 489
Query: 233 DPDAIEKTHENIVRIL 248
D + I R+L
Sbjct: 490 DNVDSQLAETMIRRLL 505
>gi|326409684|gb|ADZ66749.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326539391|gb|ADZ87606.1| Macrolide export ATP-binding/permease protein macB [Brucella
melitensis M5-90]
Length = 170
Score = 42.4 bits (97), Expect = 0.065, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A R L +N + ++ +G++IGV +++ ++++ G + ++ R+ + ++
Sbjct: 53 KMALRALRAN------IFRTVLTLLGIIIGVSSVVTMLAIGTGAQNTILDRINAMGTDLI 106
>gi|312129284|ref|YP_003996624.1| hypothetical protein Lbys_0497 [Leadbetterella byssophila DSM
17132]
gi|311905830|gb|ADQ16271.1| protein of unknown function DUF214 [Leadbetterella byssophila DSM
17132]
Length = 787
Score = 42.4 bits (97), Expect = 0.065, Method: Composition-based stats.
Identities = 34/246 (13%), Positives = 76/246 (30%), Gaps = 10/246 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +VAWR L NR +FI+ G+ IG+ A I+++ + F + +
Sbjct: 1 MIKNY-FLVAWRNLLRNRGFSFIN------IFGLAIGMAAAILILLWIK-FETSVDREYA 52
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFI-PDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ V+ + + + + P + K V VS + +
Sbjct: 53 LADRIYVMYNRDTFSGEKWAWSTTPTVMGPAIKKDYAEVEETVRVSNDRLLLTVGDKQLY 112
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
S + +S D + L + + ++L V
Sbjct: 113 SRGLIVDSVFFKVFDFEAISGDLITSLNNPNHIVVTEELALQLFSTTDVLGRTVKVDSSD 172
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ S + Y + ++ N++S + +++ I +
Sbjct: 173 LFKISAVLKDMPNNSRFKTSYFLPWEIIKKRDWDNGNWTNNSISNY-ILLRENADINAFN 231
Query: 242 ENIVRI 247
E + I
Sbjct: 232 EKVRDI 237
>gi|17986643|ref|NP_539277.1| ABC transporter ATP-binding protein [Brucella melitensis bv. 1 str.
16M]
gi|256045284|ref|ZP_05448178.1| macrolide export ATP-binding/permease protein macB [Brucella
melitensis bv. 1 str. Rev.1]
gi|256114243|ref|ZP_05454988.1| macrolide export ATP-binding/permease protein macB [Brucella
melitensis bv. 3 str. Ether]
gi|260565823|ref|ZP_05836306.1| macrolide export ATP-binding/permease macB [Brucella melitensis bv.
1 str. 16M]
gi|265991711|ref|ZP_06104268.1| macrolide export ATP-binding/permease macB [Brucella melitensis bv.
1 str. Rev.1]
gi|265995548|ref|ZP_06108105.1| macrolide export ATP-binding/permease macB [Brucella melitensis bv.
3 str. Ether]
gi|17982259|gb|AAL51541.1| abc transporter ATP-binding protein / abc transporter permease
protein [Brucella melitensis bv. 1 str. 16M]
gi|260151196|gb|EEW86291.1| macrolide export ATP-binding/permease macB [Brucella melitensis bv.
1 str. 16M]
gi|262766832|gb|EEZ12450.1| macrolide export ATP-binding/permease macB [Brucella melitensis bv.
3 str. Ether]
gi|263002667|gb|EEZ15070.1| macrolide export ATP-binding/permease macB [Brucella melitensis bv.
1 str. Rev.1]
Length = 381
Score = 42.4 bits (97), Expect = 0.065, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A R L +N + ++ +G++IGV +++ ++++ G + ++ R+ + ++
Sbjct: 264 KMALRALRAN------IFRTVLTLLGIIIGVSSVVTMLAIGTGAQNTILDRINAMGTDLI 317
>gi|237747444|ref|ZP_04577924.1| macrolide export ATP-binding/permease macB [Oxalobacter formigenes
HOxBLS]
gi|229378795|gb|EEO28886.1| macrolide export ATP-binding/permease macB [Oxalobacter formigenes
HOxBLS]
Length = 646
Score = 42.4 bits (97), Expect = 0.066, Method: Composition-based stats.
Identities = 29/243 (11%), Positives = 80/243 (32%), Gaps = 8/243 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++ + + +++ S ++ +G++IG+ +++ V+++ G +E ++ + + +
Sbjct: 256 AFKMSIQAIKAHKMR------SVLTMLGIIIGIASVVSVVALGKGSQEKILADINSMGTN 309
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
++ + D + + D + + +SS G+ +
Sbjct: 310 TIVIMPGHGFGDRNSSKYKTLTVHDSDLLARQSYVDSATPAVSSSGTLTWQNISVTAQLQ 369
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVII--GKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ + G S + + G + + T +
Sbjct: 370 GVGEQYFDVKGLKSEEGRFFNREDVKKGSAVVVIDQNTKNKLFPNGGDIVGSTIIFNRQP 429
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
K + F D ++ + +S I V VKD ++ +NI+
Sbjct: 430 LKIIGISEKQNANFGPSDTLTMWSPYTAVMNRITGDRNISSITVKVKDDVSMTAAEKNII 489
Query: 246 RIL 248
R L
Sbjct: 490 RFL 492
>gi|301067914|ref|YP_003789937.1| antimicrobial peptide ABC transporter permease [Lactobacillus
casei str. Zhang]
gi|300440321|gb|ADK20087.1| ABC-type antimicrobial peptide transport system, permease
component [Lactobacillus casei str. Zhang]
Length = 396
Score = 42.4 bits (97), Expect = 0.067, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 30/47 (63%), Gaps = 6/47 (12%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFRE 55
+ +++R L +N++ S ++ +G++IG+ +++ +M++ NG +
Sbjct: 7 IRISFRALTANKRR------SLLTMLGIVIGITSVVTIMALGNGIKA 47
>gi|210633459|ref|ZP_03297784.1| hypothetical protein COLSTE_01697 [Collinsella stercoris DSM 13279]
gi|210159145|gb|EEA90116.1| hypothetical protein COLSTE_01697 [Collinsella stercoris DSM 13279]
Length = 411
Score = 42.4 bits (97), Expect = 0.067, Method: Composition-based stats.
Identities = 42/239 (17%), Positives = 81/239 (33%), Gaps = 15/239 (6%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A R L +NR S ++ +G++IG+ A+I + S++ G R +I + +V
Sbjct: 10 AMRSLEANRGR------SLLTILGIVIGIAAVIAMTSLIGGVRNGLISGMGLNAARIVYI 63
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
+ L + + + + V + G S +
Sbjct: 64 NCG--YPLDEDDIEDLARLMPDYEAIEGTYDSYSQVQMGDKSLSVGITGASATYLEMTGA 121
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTV 191
+ G + D + + G + SP D + + KS+TV
Sbjct: 122 ASRLAEGRIYTDAEEESKSRVALI------GRNGIEAFFGSPGADAVGKTIQLNGKSFTV 175
Query: 192 LGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHENIVRILG 249
LG+ D VYM + + F + +S + ++ IE + V +G
Sbjct: 176 LGVVDDGMTGTDYCNVYMPTETVRQDFGQGWDYLSSVVGLAREGADIEAVQQQTVEQVG 234
>gi|254413961|ref|ZP_05027729.1| DevC protein [Microcoleus chthonoplastes PCC 7420]
gi|196179097|gb|EDX74093.1| DevC protein [Microcoleus chthonoplastes PCC 7420]
Length = 389
Score = 42.4 bits (97), Expect = 0.068, Method: Composition-based stats.
Identities = 23/270 (8%), Positives = 80/270 (29%), Gaps = 21/270 (7%)
Query: 3 IFSRFEVI--VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+F +F +AW + + + G+ + + V R+ +
Sbjct: 1 MFHQFFRKTPLAWLQMSRQKARL------LAAIAGIAFADFLMFFQLGV----RDALYDS 50
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + + + + ++ + ++ +
Sbjct: 51 QVRPYTTLQGDLFLVNKLSDNLASIKSFSRANLYQAAGINGVESVSLLYIGQAAWRNPDN 110
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
++ ++ N+ + + + + + ++ ++ + + P+
Sbjct: 111 QASRQIFVYGIEPNQPAFNLPDVNQQLDQLKLLNHALFDRAGTLDQIGDVPALLEEENPL 170
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIE---VFVKDPDAI 237
+ ++G+F + G + S F E V I+ + V I
Sbjct: 171 SVQANDLQIQIVGLFTLGSSFSAIGSLITSDSTFLRLF-PERQVDDIDLGIIKVNSDANI 229
Query: 238 EKTHENIVRILGNGVVVIDWQQRYQIFFSC 267
E+ ++ IL + ++++ + F+
Sbjct: 230 EQVRSDLREILPDDLLILTIDE-----FAA 254
>gi|163846744|ref|YP_001634788.1| hypothetical protein Caur_1169 [Chloroflexus aurantiacus J-10-fl]
gi|222524556|ref|YP_002569027.1| hypothetical protein Chy400_1280 [Chloroflexus sp. Y-400-fl]
gi|163668033|gb|ABY34399.1| protein of unknown function DUF214 [Chloroflexus aurantiacus
J-10-fl]
gi|222448435|gb|ACM52701.1| protein of unknown function DUF214 [Chloroflexus sp. Y-400-fl]
Length = 415
Score = 42.4 bits (97), Expect = 0.069, Method: Composition-based stats.
Identities = 35/286 (12%), Positives = 91/286 (31%), Gaps = 31/286 (10%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + + +A+ L +N+ + ++ +G++IGV A+I ++++ + +
Sbjct: 1 MKLIE--ALRIAFSSLLANKLR------AILTMLGIIIGVGAVIALLALGGAIQTLVTSE 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ G+ ++V + D+ + ++ A + + S +
Sbjct: 53 LQGLGSNLVFLFAGTNDPETNRRVPPRLTNEDIAAIADPLNVPAVAAV-CAEFSRRALTT 111
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + L S Y V N + L ++ + D
Sbjct: 112 YGGASYDALIAGVSANYPQVRNARVAEGTFFDERALELRSREAVLGYRVAQRLFPDGADP 171
Query: 181 GMGIRSKSYTVLGMFRMR------FPDYDNGMVYMSLQEAQLYFNLENA-------VSGI 227
+ + + F ++ +++ L AQ VS +
Sbjct: 172 VGQRIRINGIGFQVIGVMAERGGSFASNEDDQIFVPLTTAQDRLFPPAQNVTRRVDVSVV 231
Query: 228 EVFVKDPDAIEKTHENIVRIL---------GNGVVVIDWQQRYQIF 264
+ +D D+I++ + + +L N ++ Q F
Sbjct: 232 YIQARDEDSIDELIDQVTALLRQRNGLTYQDNNFTIVTQQDLVSSF 277
>gi|312874945|ref|ZP_07734964.1| efflux ABC transporter, permease protein [Lactobacillus iners LEAF
2053A-b]
gi|311089690|gb|EFQ48115.1| efflux ABC transporter, permease protein [Lactobacillus iners LEAF
2053A-b]
Length = 813
Score = 42.4 bits (97), Expect = 0.071, Method: Composition-based stats.
Identities = 29/242 (11%), Positives = 71/242 (29%), Gaps = 19/242 (7%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
F + + R +F + F ++ +G+ L++ + + + +E + I
Sbjct: 436 SFSLKITARNVFRFKSRMF------MTILGIAGCCALLVMGLGIRDSLKEIADTQYGDII 489
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+ +I + + + V + +
Sbjct: 490 KYDLIALHNHQIPQNNSHYQSIINDNYVKRHTYINYKVCHTKQPHKFIDSNIQVIAFADK 549
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ R N G II + LA+ + + +GDK+ Y
Sbjct: 550 NVLKKYFDLRNRKNKERYLLNSSGAIINEKLAKIMHVKVGDKLTFKDNYN---------- 599
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+T Y ++M+ + Q F + + +K + K +E ++
Sbjct: 600 ---HTKKVTISHICEMYLGHYLFMNRKTYQKVFQTSYTSNADMISLKSHKDLNKFNEKLL 656
Query: 246 RI 247
+
Sbjct: 657 KT 658
>gi|284167018|ref|YP_003405297.1| hypothetical protein Htur_3762 [Haloterrigena turkmenica DSM
5511]
gi|284016673|gb|ADB62624.1| protein of unknown function DUF214 [Haloterrigena turkmenica DSM
5511]
Length = 452
Score = 42.4 bits (97), Expect = 0.071, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + +AWR + ++ S ++ +G++IG+ A+I +++ +E ++ V
Sbjct: 1 MRALESLRLAWRSIRGHKLR------SSLTTLGIVIGIAAVIAFVTLGASLQEGVLGDVS 54
Query: 63 GINGHVVIQQ 72
+ V
Sbjct: 55 PDDRRNVYGW 64
>gi|309806076|ref|ZP_07700097.1| efflux ABC transporter, permease protein [Lactobacillus iners
LactinV 03V1-b]
gi|308167517|gb|EFO69675.1| efflux ABC transporter, permease protein [Lactobacillus iners
LactinV 03V1-b]
Length = 813
Score = 42.4 bits (97), Expect = 0.071, Method: Composition-based stats.
Identities = 29/242 (11%), Positives = 71/242 (29%), Gaps = 19/242 (7%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
F + + R +F + F ++ +G+ L++ + + + +E + I
Sbjct: 436 SFSLKITARNVFRFKSRMF------MTILGIAGCCALLVMGLGIRDSLKEIADTQYGDII 489
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+ +I + + + V + +
Sbjct: 490 KYDLIALHNHQIPQNNSHYQSIINDNYVKRHTYINYKVCHTKQPHKFIDSNIQVITFADK 549
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ R N G II + LA+ + + +GDK+ Y
Sbjct: 550 NVLKKYFDLRNRKNKERYLLNSSGAIINEKLAKIMHVKVGDKLTFKDNYN---------- 599
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+T Y ++M+ + Q F + + +K + K +E ++
Sbjct: 600 ---HTKKVTISHICEMYLGHYLFMNRKTYQKVFQTSYTSNADMISLKSHKDLNKFNEKLL 656
Query: 246 RI 247
+
Sbjct: 657 KT 658
>gi|90412522|ref|ZP_01220525.1| hypothetical protein P3TCK_14158 [Photobacterium profundum 3TCK]
gi|90326559|gb|EAS42965.1| hypothetical protein P3TCK_14158 [Photobacterium profundum 3TCK]
Length = 444
Score = 42.4 bits (97), Expect = 0.071, Method: Composition-based stats.
Identities = 37/254 (14%), Positives = 69/254 (27%), Gaps = 18/254 (7%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
+ AW L N + S +S + + I V AL E + +
Sbjct: 12 PVSLRFAWLNLLRNGRR------SLLSILIIAIAVFALTSAGGFGLYTYESLKESTARDT 65
Query: 66 GHVVIQQKYYPLVDYQFI-----------ANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
GH+ + Q Y D ++ + + P + VS S
Sbjct: 66 GHLTLSQPGYFTQDEDMPLSNGLDNSQALIKQIIADDAIRGIQPRIYFSGLVSNGSKSTI 125
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ R +S+ + +
Sbjct: 126 FMGTGVNEREFNMKGPFLDMRAGQTLSDITSSRYDPAEPQVMLGVDLARNLKVNIGDWVT 185
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
T + + + V G++ PD D +Y+ + AQ + VS + VF+ +
Sbjct: 186 LLATTSDGALNAFDFNVRGIYSTGVPDLDKRQLYIHITSAQELL-ASDKVSTLSVFLFET 244
Query: 235 DAIEKTHENIVRIL 248
+ I L
Sbjct: 245 AQTNAVQQRISEKL 258
>gi|86749355|ref|YP_485851.1| hypothetical protein RPB_2235 [Rhodopseudomonas palustris HaA2]
gi|122064330|sp|Q2IXX0|MACB_RHOP2 RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|86572383|gb|ABD06940.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
Length = 654
Score = 42.4 bits (97), Expect = 0.072, Method: Composition-based stats.
Identities = 27/234 (11%), Positives = 80/234 (34%), Gaps = 3/234 (1%)
Query: 26 SIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIAN 85
+ SF++ +G++IG+ +++ V++V + + ++ + + + + + D +
Sbjct: 274 RLRSFLTMLGIIIGIASVVFVVAVGDAAKRKVLADISSLGTNTIEIFPGKDMGDVRSSKI 333
Query: 86 RLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFD 145
+ D + +S+ + +N+ + + + + G
Sbjct: 334 KTLVAADARALAQQPYIDGVTPTVSTTSTLRYGGLEANALVNGVGDQYFDVKGTKLASGR 393
Query: 146 RGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNG 205
+ + + + G + I ++G+ + + + +
Sbjct: 394 FFDASGLRDIVQDVVIDEKTRQTFFADVAGGAVGKVILIGKVPCRIVGVMQQQQSGFGSN 453
Query: 206 M---VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
VY+ Q F +++ I + V D A +++ R L V D
Sbjct: 454 QNLSVYLPYTTVQARFLGNSSLRSILLKVSDTVATADAEQDVTRFLTLRHRVKD 507
>gi|310821875|ref|YP_003954233.1| ABC transporter permease [Stigmatella aurantiaca DW4/3-1]
gi|309394947|gb|ADO72406.1| ABC transporter, permease protein [Stigmatella aurantiaca
DW4/3-1]
Length = 408
Score = 42.4 bits (97), Expect = 0.072, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 34/80 (42%), Gaps = 6/80 (7%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A L +NR + ++ IG+ IGV L+ ++ ++ G +++ I + +
Sbjct: 13 IALYSLKANRMR------TVLTTIGIGIGVATLLAIVGIIQGLNASFDRQLATIGSNNLF 66
Query: 71 QQKYYPLVDYQFIANRLDFI 90
K+ ++ + R
Sbjct: 67 ISKFPWVMGGDWWLYRNRKN 86
>gi|226228662|ref|YP_002762768.1| hypothetical membrane protein [Gemmatimonas aurantiaca T-27]
gi|226091853|dbj|BAH40298.1| hypothetical membrane protein [Gemmatimonas aurantiaca T-27]
Length = 429
Score = 42.4 bits (97), Expect = 0.072, Method: Composition-based stats.
Identities = 25/257 (9%), Positives = 66/257 (25%), Gaps = 18/257 (7%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIK--------RVLGINGHVVIQQKYYPLVDY 80
+ +S +GV+IGV AL+ V+S+ + + + + L I + +
Sbjct: 37 TILSTLGVIIGVGALVSVLSLGDAMQRFVRGELSRTTDLQNLSIRSLTQLNVNGVNVPVR 96
Query: 81 QFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNV 140
+ L + D+ + + + G A G ++ + + S +
Sbjct: 97 NYPVFTLRDLDDIRRDITPLRGAAMTLGGTARVTYARTGNQRQVNISAATAGVEQITPPN 156
Query: 141 SNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFP 200
+ L ++ + +
Sbjct: 157 LIGGRMFTASEASHNAPVILLSNLLASELAAERGIHSILGAFVRVHGIPMEVIGIHAAYK 216
Query: 201 DYDNGMVYMSLQEAQLYFNLENAVS--GIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQ 258
+ A + I + + + +++ + + L DW+
Sbjct: 217 GERGYAATVPFAAASALLGSSATLRTPTILLKAESVEDVQRVKQEVEDWLATRY--RDWE 274
Query: 259 ------QRYQIFFSCYE 269
R +
Sbjct: 275 TSVQISTREGTLEQAMQ 291
>gi|261380109|ref|ZP_05984682.1| macrolide export ATP-binding/permease protein MacB [Neisseria
subflava NJ9703]
gi|284797330|gb|EFC52677.1| macrolide export ATP-binding/permease protein MacB [Neisseria
subflava NJ9703]
Length = 645
Score = 42.4 bits (97), Expect = 0.073, Method: Composition-based stats.
Identities = 27/231 (11%), Positives = 78/231 (33%), Gaps = 4/231 (1%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG ++ +++ + + + + D + +
Sbjct: 269 SLLTMLGIIIGIASVVSVVALGNGSQQKILEDINSMGTNTISIFPGRGFGDRRSGRIKTL 328
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I D + + +S G+ + + + G +
Sbjct: 329 TINDAKAISQQSYVASATPQTNSSGTLTYRNTDLTASLYGVGEQYFDVRGLKLEEGRLFD 388
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ D + K + + + + + TV+G+ + + N
Sbjct: 389 DDDVKTDAQVVVIDQ-NTKTKLFGEGVNPLGKTILFKKRPLTVIGIMKKDDNSFGNSDSL 447
Query: 209 MSLQEAQLYFNL---ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
M + E+ + I V +KD + +++ +L D
Sbjct: 448 MLWSPYTTVMHQITGESYTNSIVVKIKDDANTQVAEKSLTELLKARHGTED 498
>gi|71908014|ref|YP_285601.1| hypothetical protein Daro_2395 [Dechloromonas aromatica RCB]
gi|71847635|gb|AAZ47131.1| Protein of unknown function DUF214 [Dechloromonas aromatica RCB]
Length = 404
Score = 42.4 bits (97), Expect = 0.073, Method: Composition-based stats.
Identities = 37/259 (14%), Positives = 86/259 (33%), Gaps = 13/259 (5%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A+R +F I++A+ + + +I + + G + + +
Sbjct: 2 IKLAFRNIFRQYIRTAITLAAIVFGVVGLILGGGFVRDIFFQLG-EALIHSQSGHLQVVK 60
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSG-----QAFVSGLSSGGSGVLVRGISN 123
Y +F+ + + +P + + +V
Sbjct: 61 TGYFTYGSRSPEKFLITDSSSLKRELAKIPEIQEVLERVSFTGLLNNGKTDWPIVADGVE 120
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
D SF + GV +G+ +A+ L + GD++++L +
Sbjct: 121 PDGEARLGSFMQIVEGRQLTHKDNFGVTVGQGIAKALNLKPGDRVSLLVNTPEG-----A 175
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ + ++G+F+ DYD + + L AQ N ++ + + +K E
Sbjct: 176 LNTMELNIVGIFQSFSKDYDARFIRLPLPAAQELLG-SNGINSLVISLKQTSDTETVSLK 234
Query: 244 IVRIL-GNGVVVIDWQQRY 261
+ IL + W Q
Sbjct: 235 LKAILNPDQYESRTWIQLN 253
>gi|225872562|ref|YP_002754017.1| ABC-type transport system, involved in lipoprotein release,
permease components [Acidobacterium capsulatum ATCC
51196]
gi|225791966|gb|ACO32056.1| ABC-type transport system, involved in lipoprotein release,
permease components [Acidobacterium capsulatum ATCC
51196]
Length = 418
Score = 42.1 bits (96), Expect = 0.074, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Query: 13 WRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQ 72
+R +++N+ +F ++ G+ GV ++++++ V GFR +++ V++
Sbjct: 12 FRAIWANKLRSF------LTMFGIAWGVGSMLLLIGVGEGFRVGQRQQLSRFGSDVIMMW 65
>gi|119356457|ref|YP_911101.1| ABC transporter related [Chlorobium phaeobacteroides DSM 266]
gi|134048480|sp|A1BE50|MACB_CHLPD RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|119353806|gb|ABL64677.1| ABC transporter related protein [Chlorobium phaeobacteroides DSM
266]
Length = 657
Score = 42.1 bits (96), Expect = 0.074, Method: Composition-based stats.
Identities = 36/273 (13%), Positives = 92/273 (33%), Gaps = 20/273 (7%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A++ + +N+ F +S +G+ +GV ++I +M++ G + M +++ + +++
Sbjct: 264 AFQSILANKMRTF------LSVLGIFVGVASVIAMMALGEGAKSAMQEQLKSMGSNMLSI 317
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
+ + V S V S +G N ++S
Sbjct: 318 RGGSAKIRGAAQGAGAVARFSFNDVNDIASLGKLVKNASGVVNGSARIVYGNKNWSSTLT 377
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTV 191
YG + +++ +I + +G P+G I+
Sbjct: 378 GVGFDYGTMRASIPAIGRWFTREEIQIREKSAIIGVTVVKEIFGSSNPIGKTIKINRINF 437
Query: 192 LGMFRMRF-----PDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ P ++ +V + + A ++ +S I V V P + + I
Sbjct: 438 KVIGIAPAKGFSGPQDEDDVVIIPVTTAMYRVLGKDYLSSIFVEVASPGLMGQAKTAITE 497
Query: 247 IL---------GNGVVVIDWQQRYQIFFSCYES 270
++ + + D + ++ S ++
Sbjct: 498 LIRKKHRLEEGDDSFNIRDMTEIQKMLSSTTQT 530
>gi|328953894|ref|YP_004371228.1| protein of unknown function DUF214 [Desulfobacca acetoxidans DSM
11109]
gi|328454218|gb|AEB10047.1| protein of unknown function DUF214 [Desulfobacca acetoxidans DSM
11109]
Length = 408
Score = 42.1 bits (96), Expect = 0.076, Method: Composition-based stats.
Identities = 44/243 (18%), Positives = 82/243 (33%), Gaps = 23/243 (9%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRL- 87
SF++ +GV+IGV A+++V + G R + +++ G +++ +A
Sbjct: 21 SFLTVLGVVIGVSAVVLVWGLGAGARMVVAQQISGAGAGLLMIISGATSKGGWRMAMGTA 80
Query: 88 ------------DFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSR 135
IP+V +P A V S +++ S + +
Sbjct: 81 PSLTMGDVQAIGKEIPEVEHAVPVWGEVAQVVFSPLNWSTMILGTTSEFAQLRNVDLVAG 140
Query: 136 FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMF 195
+ N S K ++G +A+NL +P G + +
Sbjct: 141 RFFNASECHRGAKVCVLGYTVAQNL-------CRGKNPIGQTLRINNIPFVLIGIMAPKG 193
Query: 196 RMRFPDYDNGMVYMSLQEAQL-YFN--LENAVSGIEVFVKDPDAIEKTHENIVRILGNGV 252
R + MV L+ Q F L V + V V DP ++ I +L
Sbjct: 194 RTPDGRDQDDMVLAPLETTQKSLFGTALPGVVKFVLVSVADPTKLDTAQSKIDNLLTQRH 253
Query: 253 VVI 255
+
Sbjct: 254 RIR 256
>gi|297619699|ref|YP_003707804.1| protein of unknown function DUF214 [Methanococcus voltae A3]
gi|297378676|gb|ADI36831.1| protein of unknown function DUF214 [Methanococcus voltae A3]
Length = 409
Score = 42.1 bits (96), Expect = 0.076, Method: Composition-based stats.
Identities = 31/243 (12%), Positives = 72/243 (29%), Gaps = 12/243 (4%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKY------YPLVDYQF 82
S+++ IG+++GV ++I ++S F++ + + + G + Q D +
Sbjct: 21 SWLTIIGIVVGVASVITIISTGELFQDKVSETIESFGGSTISLQARSNGGSSVNDKDPEL 80
Query: 83 IANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSN 142
+ + + V + + + G + Q S
Sbjct: 81 TRTDVMVLQGLPVVKYVNPKVSVFAEATYGTKKTNFYVEGVDPGVWPQISDQELLEGRMF 140
Query: 143 DFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDY 202
++I D+A N +++ G + + F
Sbjct: 141 TASDRNVILITNDIAENSFDREVGLNQMINLNGKSFRVIGILDDNRGMSS--FMSSGVYI 198
Query: 203 DNGMVY-MSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRY 261
M Y + +E + IE+ + D + I + L V +
Sbjct: 199 PYKMAYEIPEKEGITTSKKRDVYDSIEIKLADNADYNYSMNLIKKALRTSRHV---TESN 255
Query: 262 QIF 264
+ F
Sbjct: 256 EDF 258
>gi|54307852|ref|YP_128872.1| hypothetical protein PBPRA0649 [Photobacterium profundum SS9]
gi|46912278|emb|CAG19070.1| conserved hypothetical protein [Photobacterium profundum SS9]
Length = 444
Score = 42.1 bits (96), Expect = 0.076, Method: Composition-based stats.
Identities = 43/296 (14%), Positives = 82/296 (27%), Gaps = 46/296 (15%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
+ AW L N + S +S + + I V AL E + +
Sbjct: 12 PVSLRFAWLNLLRNGRR------SLLSILIIAIAVFALTSAGGFGLYTYESLKESTARDT 65
Query: 66 GHVVIQQKYYPLVDYQFI-----------ANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
GH+ + Q Y D ++ + + P + VS S
Sbjct: 66 GHLTLSQPGYFTQDEDMPLSNGLDNSEALIKQIITDDAIRSIQPRIYFTGLVSNGSKSTI 125
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINI-LSP 173
+ G +D + + + ++ K+++
Sbjct: 126 FMGTGVNDREFDMK-GPFLDIRAGQSLSDVTSSRYDPAEPQVMLGVDLARNLKVDVGDWV 184
Query: 174 YGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKD 233
T + + + V G++ P+ D +Y+ + AQ N VS + VF+ +
Sbjct: 185 TLLATTSDGALNAFDFNVRGIYSTGVPELDKRQLYIHITSAQELL-ASNKVSTLSVFLFE 243
Query: 234 PDAIEKTHENIVR------------------------ILGNGVVVIDWQQRYQIFF 265
+ I L + + WQ R FF
Sbjct: 244 TAQTNAVQQRISEQLHQLSNSSDLLSNTSEQLSNTSDQLSQPIEITPWQDR--AFF 297
>gi|298369959|ref|ZP_06981275.1| macrolide export ATP-binding/permease protein MacB [Neisseria sp.
oral taxon 014 str. F0314]
gi|298281419|gb|EFI22908.1| macrolide export ATP-binding/permease protein MacB [Neisseria sp.
oral taxon 014 str. F0314]
Length = 645
Score = 42.1 bits (96), Expect = 0.077, Method: Composition-based stats.
Identities = 28/231 (12%), Positives = 79/231 (34%), Gaps = 4/231 (1%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG ++ +++ + + + + D + +
Sbjct: 269 SLLTMLGIIIGIASVVSVVALGNGSQKKILEDISAMGTNTISIFPGSGFGDRRSGRIKTL 328
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I D + + +S G+ ++ + + G
Sbjct: 329 TIADAKVIAQQSYVASATPQTTSSGTLTYRNTDLSASLYGVGEQYFDVRGLKLESGRLFD 388
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ +D + K + D + + + TV+G+ + + N V
Sbjct: 389 EADVKEDAQVVVIDQ-NTKDKLFGTDVDPLGKTVLFKKRPLTVIGVMQKEENSFGNSDVL 447
Query: 209 MSLQEAQLYFNL---ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
M + E+ + I V +K+ + + + +L D
Sbjct: 448 MLWSPYTTVMHQITGESHTNSITVKIKNDANTQVAEKGLTELLKTRHGTED 498
>gi|309804834|ref|ZP_07698896.1| efflux ABC transporter, permease protein [Lactobacillus iners
LactinV 09V1-c]
gi|308165773|gb|EFO67994.1| efflux ABC transporter, permease protein [Lactobacillus iners
LactinV 09V1-c]
Length = 813
Score = 42.1 bits (96), Expect = 0.077, Method: Composition-based stats.
Identities = 29/242 (11%), Positives = 71/242 (29%), Gaps = 19/242 (7%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
F + + R +F + F ++ +G+ L++ + + + +E + I
Sbjct: 436 SFSLKITARNVFRFKSRMF------MTILGIAGCCALLVMGLGIRDSLKEIADTQYGDII 489
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+ +I + + + V + +
Sbjct: 490 KYDLIALHNHQIPQNNSHYQSIINDNYVKRHTYINYKVCHTKQPHKFIDSNIQVIAFADK 549
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ R N G II + LA+ + + +GDK+ Y
Sbjct: 550 NVLKKYFDLRNRKNKERYLLNSSGAIINEKLAKIMHVKVGDKLTFKDNYN---------- 599
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+T Y ++M+ + Q F + + +K + K +E ++
Sbjct: 600 ---HTKKVTISHICEMYLGHYLFMNRKTYQKVFQTSYTSNADMISLKSHKDLNKFNEKLL 656
Query: 246 RI 247
+
Sbjct: 657 KT 658
>gi|329766091|ref|ZP_08257650.1| hypothetical protein Nlim_1438 [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|329137362|gb|EGG41639.1| hypothetical protein Nlim_1438 [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 385
Score = 42.1 bits (96), Expect = 0.078, Method: Composition-based stats.
Identities = 32/243 (13%), Positives = 73/243 (30%), Gaps = 8/243 (3%)
Query: 19 NRKNAFISIASFISFIGVMIGVMALIVVMSVMNG-FREDMIKRVLGINGHVVIQQKYYPL 77
N+K + I + + V IG++ + V + G F + NG+V++ + +
Sbjct: 4 NKKGSLIG-----AVLAVTIGILVIHVNFVIFQGLFDAIVRDISDYRNGNVLVTDEENFI 58
Query: 78 VDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFY 137
+ ++ + ++ G+ I L++ +
Sbjct: 59 TKSDQSLVKWFERIPYVEAATPRLSSSTSINMTKFGTLHEKTRIPIVGVDPLRDIRTSTV 118
Query: 138 GNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRM 197
D + L N+ +G S + + + + V G+ +
Sbjct: 119 SETVTDG-QYVYARNSIVLGSNVARDLGGAQVGDSLKLKIVDRYGQDQIRRFVVTGIAKS 177
Query: 198 RFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN-GVVVID 256
+ V + + + N S I V +KDP + N V
Sbjct: 178 PGGQGFDYSVVVHIDTLRDMMNRHGESSSIMVKLKDPTKATDVKNFFLAAFPNDDFVAET 237
Query: 257 WQQ 259
++
Sbjct: 238 IEE 240
>gi|302560261|ref|ZP_07312603.1| ABC transporter integral membrane protein [Streptomyces
griseoflavus Tu4000]
gi|302477879|gb|EFL40972.1| ABC transporter integral membrane protein [Streptomyces
griseoflavus Tu4000]
Length = 842
Score = 42.1 bits (96), Expect = 0.078, Method: Composition-based stats.
Identities = 26/249 (10%), Positives = 62/249 (24%), Gaps = 11/249 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F A R + +++ ++ + VM+GV + + N + + K+
Sbjct: 1 MFRT-----ALRNVSAHKARL------LMTVLAVMLGVAFVSGTLVFTNSLSDALQKQSA 49
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
HV + + + A + G L
Sbjct: 50 KGFDHVDVAVTPQWREAEGDKVGEYRELTRDLVDDSAKVPGAERAIGVVEGFTALAGKDG 109
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ Q+ ++G + G + + ++ +
Sbjct: 110 KLLGNGFQSQGGNYWGADDPRYPLADGRAPKGEGEILIDSETAERAGYEVGDTVRMSVDG 169
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ T + + AQ F I+V KD +
Sbjct: 170 PVMEPEITGIFTTDDGNVAAGGSLTLFDTASAQKLFGKAGTFDEIDVKAKDGVSDTALEA 229
Query: 243 NIVRILGNG 251
+ + L +
Sbjct: 230 QLKKALPSD 238
>gi|159036079|ref|YP_001535332.1| hypothetical protein Sare_0412 [Salinispora arenicola CNS-205]
gi|157914914|gb|ABV96341.1| protein of unknown function DUF214 [Salinispora arenicola CNS-205]
Length = 394
Score = 42.1 bits (96), Expect = 0.078, Method: Composition-based stats.
Identities = 32/239 (13%), Positives = 78/239 (32%), Gaps = 8/239 (3%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
VA L +NR S ++ +GV+IGV ++++++++ G ++ + ++V G+ ++++
Sbjct: 9 VALAALRANRLR------SGLTMLGVIIGVASVVILVAIGAGTKQQVEQQVEGLGSNLLL 62
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
V + L + ++SG + S +
Sbjct: 63 VVPGRIDVGSAPALSPLTLDDVDVVARVVGDPDRVAVTVTSGATVRAGTRSQFSTVQGVL 122
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
+ + + + + + + +
Sbjct: 123 ETTPVVFTREVTRGRYLTESDVDTSRRVAVLGASVSRALFPDRDPVGQQLTVSGVRFRVI 182
Query: 191 VLG-MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ + V++ + AQ + + V GI V D + I+ E IV L
Sbjct: 183 GVFAPLGQSLGVDRDDEVHVPVTAAQRLYGTQ-RVDGIAVKAPDRERIDALGERIVVEL 240
>gi|116496311|ref|YP_808045.1| peptide ABC transporter permease [Lactobacillus casei ATCC 334]
gi|116106461|gb|ABJ71603.1| ABC-type antimicrobial peptide transport system, permease
component [Lactobacillus casei ATCC 334]
Length = 396
Score = 42.1 bits (96), Expect = 0.078, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 30/47 (63%), Gaps = 6/47 (12%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFRE 55
+ +++R L +N++ S ++ +G++IG+ +++ +M++ NG +
Sbjct: 7 IRISFRALTANKRR------SLLTMLGIVIGITSVVTIMALGNGIKA 47
>gi|312871286|ref|ZP_07731384.1| efflux ABC transporter, permease protein [Lactobacillus iners LEAF
3008A-a]
gi|312872676|ref|ZP_07732741.1| efflux ABC transporter, permease protein [Lactobacillus iners LEAF
2062A-h1]
gi|311091718|gb|EFQ50097.1| efflux ABC transporter, permease protein [Lactobacillus iners LEAF
2062A-h1]
gi|311093300|gb|EFQ51646.1| efflux ABC transporter, permease protein [Lactobacillus iners LEAF
3008A-a]
Length = 813
Score = 42.1 bits (96), Expect = 0.079, Method: Composition-based stats.
Identities = 29/242 (11%), Positives = 71/242 (29%), Gaps = 19/242 (7%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
F + + R +F + F ++ +G+ L++ + + + +E + I
Sbjct: 436 SFSLKITARNVFRFKSRMF------MTILGIAGCCALLVMGLGIRDSLKEIADTQYGDII 489
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+ +I + + + V + +
Sbjct: 490 KYDLIALHNHQIPQNNSHYQSIINDNYVKRHTYINYKVCHTKQPHKFIDSNIQVIAFADK 549
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ R N G II + LA+ + + +GDK+ Y
Sbjct: 550 NVLKKYFDLRNRKNKERYLLNSSGAIINEKLAKIMHVKVGDKLTFKDNYN---------- 599
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+T Y ++M+ + Q F + + +K + K +E ++
Sbjct: 600 ---HTKKVTISHICEMYLGHYLFMNRKTYQKVFQTSYTSNADMISLKSHKDLNKFNEKLL 656
Query: 246 RI 247
+
Sbjct: 657 KT 658
>gi|218782685|ref|YP_002434003.1| hypothetical protein Dalk_4858 [Desulfatibacillum alkenivorans
AK-01]
gi|218764069|gb|ACL06535.1| protein of unknown function DUF214 [Desulfatibacillum
alkenivorans AK-01]
Length = 405
Score = 42.1 bits (96), Expect = 0.079, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M F VA + + NR S ++ +G++IGV ++I +M++ G ++D+ +
Sbjct: 1 MKWFKFV--KVALQSIMKNRMR------SLLTMLGIIIGVGSVITLMALGEGSQKDIKTQ 52
Query: 61 VLGINGHVVIQQK 73
+ + ++++
Sbjct: 53 ISSMGTNLLMIHP 65
>gi|294995175|ref|ZP_06800866.1| putative adhesion component transport transmembrane protein ABC
transporter [Mycobacterium tuberculosis 210]
Length = 855
Score = 42.1 bits (96), Expect = 0.079, Method: Composition-based stats.
Identities = 36/248 (14%), Positives = 74/248 (29%), Gaps = 18/248 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
AWR L + +G+ +GV +IV + V + +
Sbjct: 13 WRTAWRRLRQRP------FQYILLVLGIALGVA-MIVAIDVSSNSAQRAFDLSAAAITGK 65
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ P + G GL + +
Sbjct: 66 STHRLVSGPAGVDQQLYVDLRRHGYDFSAPVIEGYVLARGLGNRAMQFMGTDPFAESAFR 125
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
++ + R GV++ + +A+ G+++GD+I + G
Sbjct: 126 SPLWSNQNIAELGGFLTRPNGVVLSRQVAQKYGLAVGDRIALQ-------VKGAPTTVTL 178
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+L + ++ + AQ F++ +S I++ + D E T I + L
Sbjct: 179 VGLLTPADEVSNQKLSDLIIADISTAQELFHMPGRLSHIDLIITD----EATATRIQQRL 234
Query: 249 GNGVVVID 256
GV +
Sbjct: 235 PAGVRMET 242
>gi|191639855|ref|YP_001989021.1| Membrane subunit [Lactobacillus casei BL23]
gi|190714157|emb|CAQ68163.1| Membrane subunit [Lactobacillus casei BL23]
gi|327383966|gb|AEA55442.1| Macrolide-specific ABC-type efflux carrier [Lactobacillus casei
LC2W]
gi|327387150|gb|AEA58624.1| Macrolide-specific ABC-type efflux carrier [Lactobacillus casei
BD-II]
Length = 396
Score = 42.1 bits (96), Expect = 0.081, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 30/47 (63%), Gaps = 6/47 (12%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFRE 55
+ +++R L +N++ S ++ +G++IG+ +++ +M++ NG +
Sbjct: 7 IRISFRALTANKRR------SLLTMLGIVIGITSVVTIMALGNGIKA 47
>gi|218678011|ref|ZP_03525908.1| putative ABC transporter, permease protein [Rhizobium etli CIAT
894]
Length = 56
Score = 42.1 bits (96), Expect = 0.081, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 9/51 (17%)
Query: 3 IFSRFE-VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNG 52
+F FE + +A R + N +F ++ +GV+IGV A+I ++++ NG
Sbjct: 1 MF--FETLKLALRAISRNMLRSF------LTVLGVVIGVAAVIALVTIGNG 43
>gi|182412395|ref|YP_001817461.1| hypothetical protein Oter_0571 [Opitutus terrae PB90-1]
gi|177839609|gb|ACB73861.1| protein of unknown function DUF214 [Opitutus terrae PB90-1]
Length = 382
Score = 42.1 bits (96), Expect = 0.081, Method: Composition-based stats.
Identities = 29/257 (11%), Positives = 81/257 (31%), Gaps = 27/257 (10%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A L +R + I G+ GV A++ +++++ G + + + ++
Sbjct: 16 LSLAGTNLRRHRWR------ALIGTAGIAFGVAAMLTILAIVTGAIGMFQRILSSDSHYL 69
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKV-LPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
V ++ L +++ I +V VS ++ +
Sbjct: 70 VFERNVSDLFFSSVTRDQIAAIRARPEVESAHPVLFGIVSAPDHPVITCFGIEATDPRLA 129
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ R +D + G + L + +
Sbjct: 130 KAEWRAGRAADFGLHDGEIYLGSRAAEFL-------------------GASAGQTLAIGR 170
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ +++G V++ L+ AQ +F+ +A S + V ++D +
Sbjct: 171 GSFRVAGIFKTENGFEDGGVFLPLKAAQEFFHRGDAASVVTVKLRDQSTGAVFKRALEAA 230
Query: 248 LGNGVVVIDWQQRYQIF 264
+ + + ++ +
Sbjct: 231 EPGVIALEN-REFNSSY 246
>gi|170760536|ref|YP_001785930.1| putative ABC transporter, permease protein [Clostridium botulinum
A3 str. Loch Maree]
gi|169407525|gb|ACA55936.1| putative ABC transporter, permease protein [Clostridium botulinum
A3 str. Loch Maree]
Length = 822
Score = 42.1 bits (96), Expect = 0.081, Method: Composition-based stats.
Identities = 30/260 (11%), Positives = 73/260 (28%), Gaps = 21/260 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M +F +A+ + N+ + + + +M+ I+ S + + + K
Sbjct: 1 MKLF----FKIAFNSIKKNKIRYMLLTCTLVLSTIIMLSTS--IIKDSAIKIREDQLRKT 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
L + + P + + I N + I + ++P + G A + + V
Sbjct: 55 TLNSQLVITTADEKNPFFNPKDIINSIKNIDGISHIVPRIGGMAKDYKTLKDVNIIGVDL 114
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
++ + N+ + L I +
Sbjct: 115 NKQKAAFPIELIDKYKVKDKENEIIINEKYAKENSLKVGAKIKLLIGTKNKEFTISGISK 174
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
D +S+ AQ + ++ I + +K+ D I
Sbjct: 175 ---------------NTGVFDPSMNTAMISIDNAQYLLDQKDNAYSIGITIKNLDDINNM 219
Query: 241 HENIVRILGNGVVVIDWQQR 260
E I + + ++
Sbjct: 220 IEKINPKVSSKFIIQQRYDM 239
>gi|152979011|ref|YP_001344640.1| ABC transporter related [Actinobacillus succinogenes 130Z]
gi|150840734|gb|ABR74705.1| ABC transporter related [Actinobacillus succinogenes 130Z]
Length = 643
Score = 42.1 bits (96), Expect = 0.081, Method: Composition-based stats.
Identities = 23/221 (10%), Positives = 64/221 (28%), Gaps = 1/221 (0%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQ-FIANRL 87
S ++ +G++IG+ +++ V+++ NG ++ ++ + G+ + + D + L
Sbjct: 268 SLLTMLGIIIGITSVVSVVALGNGSQQKILSNINGLGTNTMTIFNGTGFGDRRADQMQNL 327
Query: 88 DFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRG 147
+ SSG + ++++ + + G
Sbjct: 328 TVNDANALAKQSYVQSVTPNSSSSGLLIYGNQSFTSTNLRGIGEQYFDVEGMRLVMGRSI 387
Query: 148 KGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMV 207
+ ++ L K + R + R + +
Sbjct: 388 TQQEVSENAQVALLDESSKKSIFPDEDPLGKTVMFAKRPFRIIGVVTDRQMGAASSSLSI 447
Query: 208 YMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
Y + I V + D +++ L
Sbjct: 448 YAPYTTVMNKVTGGTKIGSITVKIADNVNTTVAEKSLTDYL 488
>gi|313890620|ref|ZP_07824248.1| efflux ABC transporter, permease protein [Streptococcus
pseudoporcinus SPIN 20026]
gi|313121137|gb|EFR44248.1| efflux ABC transporter, permease protein [Streptococcus
pseudoporcinus SPIN 20026]
Length = 408
Score = 42.1 bits (96), Expect = 0.082, Method: Composition-based stats.
Identities = 38/264 (14%), Positives = 77/264 (29%), Gaps = 24/264 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A ++ ++ S ++ +G++IGV A++++M + + + + N
Sbjct: 4 WKFALSSIWGHKMR------SLLTMLGIIIGVSAVVIIMGLGDAMKNSVTDS-FANNQKE 56
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
V L D KV Q + V + F
Sbjct: 57 VRLYFKSDDEKNDSPYASLSIQEDTNKVKKEWLEQIVKNNDGIDSYYVTNNTNATIAFGK 116
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ G + F K I+ + +I ++ G+ SK+
Sbjct: 117 NKMKDVNIIGASKDYFKIKKYDIVAGRQLTDKDYRNFSRIIVIDTNLSNKLFGLNNYSKA 176
Query: 189 YTVLGMFRMRFP----------------DYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK 232
+ + + G MS + FN+ N V I + V
Sbjct: 177 LNKVVTVNDKDYLVVGVYKSDIPAISVAGMEIGESVMSNTQVASEFNI-NEVGQIYIHVT 235
Query: 233 DPDAIEKTHENIVRILGNGVVVID 256
D + + ++L + V D
Sbjct: 236 DVKRSTELGKKAAKMLTDLSHVKD 259
>gi|295115139|emb|CBL35986.1| ABC-type antimicrobial peptide transport system, permease component
[butyrate-producing bacterium SM4/1]
Length = 450
Score = 42.1 bits (96), Expect = 0.082, Method: Composition-based stats.
Identities = 14/190 (7%), Positives = 52/190 (27%), Gaps = 7/190 (3%)
Query: 15 YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKY 74
L + F ++ +GV+IG +++V++S+ G ++ + I+
Sbjct: 13 NLRRRKLRTF------LTVLGVVIGTASIVVMVSLGIGLNNFTMENIRSSGSLTAIEIYN 66
Query: 75 YPLVDYQFI-ANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSF 133
Y ++ + + ++ + + L+ + + F
Sbjct: 67 YQNMNGEDVSEDKFMTDETIKSFAEIPHVTSVYPMLTMSVLMKQGAYEGYVTMTGVPLDF 126
Query: 134 SRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLG 193
+ + + + + + + + ++ V+
Sbjct: 127 MKDIPLGKGSRPSPNAEGLEMVVGNMVARNFSNSKTGKGYWDTGEEPDVDFMNRPMFVIF 186
Query: 194 MFRMRFPDYD 203
+
Sbjct: 187 DMNAYYQSQS 196
>gi|283956019|ref|ZP_06373508.1| macrolide-specific efflux protein macB [Campylobacter jejuni subsp.
jejuni 1336]
gi|283792495|gb|EFC31275.1| macrolide-specific efflux protein macB [Campylobacter jejuni subsp.
jejuni 1336]
Length = 641
Score = 42.1 bits (96), Expect = 0.083, Method: Composition-based stats.
Identities = 29/243 (11%), Positives = 75/243 (30%), Gaps = 9/243 (3%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A+ + +++ S ++ +G++IG+ +++ V+++ G + +++ + + +
Sbjct: 250 FKIAYSSILAHKLR------SILTMLGIIIGIASVVCVVALGLGSQAKVLESIARLGTNT 303
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + D + RL+F +SG + +S
Sbjct: 304 IEIRPGKGFGDLRSGKTRLNFSDLETLRSLEYLEAVDAHSNTSGVATYTNISLSARAEGV 363
Query: 129 LQNSFSR---FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
N+F+ + + +
Sbjct: 364 GVNNFAIEGLRIDAGRILNNDDVKNSTNVAVLDFNAKKNLFPNEKSENILGRVVLFNSQP 423
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
K VL + + + +Y+ + + I V VKD + I+
Sbjct: 424 FKIIGVLQKDTDKPIEDNVVRLYIPYTTLMNKLTGDRNLREIIVKVKDDVSSTLAENAII 483
Query: 246 RIL 248
RIL
Sbjct: 484 RIL 486
>gi|254672648|emb|CBA06453.1| putative ABC transporter, ATP-binding protein [Neisseria
meningitidis alpha275]
Length = 388
Score = 42.1 bits (96), Expect = 0.083, Method: Composition-based stats.
Identities = 31/231 (13%), Positives = 76/231 (32%), Gaps = 5/231 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG ++ +++ + I + + D + +
Sbjct: 13 SLLTMLGIIIGIASVVSVVALGNGSQKKILEDISSIGTNTISIFPGRGFGDRRSGRIKTL 72
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I D + + SSGG+ + + + G
Sbjct: 73 TIDDAKIIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFD 132
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ +D + + R + TV+G+ + + N V
Sbjct: 133 ENDVKEDAQVVVIDQNVKDKLFADSDPLGKTI--LFRKRPLTVIGVMKKDENAFGNSDVL 190
Query: 209 MSLQEAQLYFNL---ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
M + E+ + I V +KD + + + +L D
Sbjct: 191 MLWSPYTTVMHQITGESHTNSITVKIKDNANTQVAEKGLTDLLKARHGTED 241
>gi|237654136|ref|YP_002890450.1| hypothetical protein Tmz1t_3479 [Thauera sp. MZ1T]
gi|237625383|gb|ACR02073.1| protein of unknown function DUF214 [Thauera sp. MZ1T]
Length = 399
Score = 42.1 bits (96), Expect = 0.083, Method: Composition-based stats.
Identities = 12/71 (16%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ R + +A R + ++R S ++ +G+ +G+ A+I++ S+ G ++
Sbjct: 1 MRWRDALHLALRAITAHRLR------SLLTLLGIGVGIAAVILLTSIGEGLHRFVLAEFG 54
Query: 63 GINGHVVIQQK 73
+V+
Sbjct: 55 QFGTNVINLHP 65
>gi|119385662|ref|YP_916717.1| ABC transporter related [Paracoccus denitrificans PD1222]
gi|119386156|ref|YP_917211.1| ABC transporter related [Paracoccus denitrificans PD1222]
gi|134048474|sp|A1B677|MACB1_PARDP RecName: Full=Macrolide export ATP-binding/permease protein MacB
1/2
gi|119376257|gb|ABL71021.1| ABC transporter related protein [Paracoccus denitrificans PD1222]
gi|119376751|gb|ABL71515.1| ABC transporter related protein [Paracoccus denitrificans PD1222]
Length = 668
Score = 42.1 bits (96), Expect = 0.085, Method: Composition-based stats.
Identities = 27/250 (10%), Positives = 78/250 (31%), Gaps = 7/250 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A + +++ +F ++ +G++IG+ +++ V+++ G R +++ + G+ +
Sbjct: 278 ALRMALLSMRAHKLRSF------LTMLGIIIGIASVVSVVALGEGSRRQVLQNIAGLGTN 331
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D + + + + + +++ S
Sbjct: 332 TLQIFPGRDFGDMRSGRVTTLVTADAAALARQPHVASVSPTVGTSATLRHGATEASAQIS 391
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKD-LARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ + G + + + + P M +
Sbjct: 392 GVGEQYFDVAGVALTQGRGFDEADVAAMGQNVVIDENTRTSLFGDGPALGQVFMAGKVPL 451
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ V + VY Q + +VSG+ + V D + + +
Sbjct: 452 RVIGVAEAQNRGPGGSTSLTVYAPYTTVQARYLGSTSVSGLTLRVADDVDMALAEQMVAD 511
Query: 247 ILGNGVVVID 256
IL D
Sbjct: 512 ILTRRHGTRD 521
>gi|329119384|ref|ZP_08248070.1| ABC superfamily ATP binding cassette transporter, ABC/membrane
protein [Neisseria bacilliformis ATCC BAA-1200]
gi|327464529|gb|EGF10828.1| ABC superfamily ATP binding cassette transporter, ABC/membrane
protein [Neisseria bacilliformis ATCC BAA-1200]
Length = 645
Score = 42.1 bits (96), Expect = 0.086, Method: Composition-based stats.
Identities = 31/231 (13%), Positives = 80/231 (34%), Gaps = 4/231 (1%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG ++ +++ + + + V D + +
Sbjct: 269 SLLTMLGIIIGIASVVSVVALGNGSQQKILEDINSMGTNTVSIFPGRGFGDRRSGRIKTL 328
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I D + + SS G+ + + + + G
Sbjct: 329 TIADAQAIAKQGYVASVTPQTSSSGTLTYRNTDLTAMLYGVGDQYFDVRGLKLASGRLFD 388
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
I +D + K + D + + + TV+G+ + ++ +
Sbjct: 389 EDDIKQDAQVAVVDDNV-KTKLFGDGVDPLGKTILFKKRPLTVIGVLQKEENNFGSSDSL 447
Query: 209 MSLQEAQLYFNL---ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
M + E S I V +KD + + +++ +L D
Sbjct: 448 MVWSPYTTVMHQITGETYASSITVKIKDDVSSQVAEKSLTELLKARHGTED 498
>gi|328543122|ref|YP_004303231.1| Export ABC transporter permease protein [Polymorphum gilvum
SL003B-26A1]
gi|326412868|gb|ADZ69931.1| Export ABC transporter permease protein [Polymorphum gilvum
SL003B-26A1]
Length = 403
Score = 42.1 bits (96), Expect = 0.086, Method: Composition-based stats.
Identities = 30/266 (11%), Positives = 81/266 (30%), Gaps = 21/266 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A++ + N S ++ +G++IGV A+I ++S+ + + + + ++
Sbjct: 6 IKLAFQAIRRNALR------STLTVLGIVIGVAAVIGMVSIGHSTTAQVTASLARLGSNL 59
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
++ + + + + + + + + +
Sbjct: 60 LVVRPGVAERGPGGVRTDAKAFDRFDVEVLRAQLYSVRAVAPTVSTSATAVVGNENRTVS 119
Query: 129 LQNSFSRFYGNVSNDFDRGKGV-----IIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + ++ RG+ G+ + + P G +
Sbjct: 120 VWGTDNAYFVTQDWPVVRGREFLDSDLRAGRPVCIVGQTIKEELFQNQDPIGKRMRVRGL 179
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ + F + V M L+ Q ++ I V +D K +
Sbjct: 180 SCEVVGLLEEKGQTGFGQDQDNTVIMPLRAVQRRLLGSTDIAMISVSARDGVDTGKVQAD 239
Query: 244 IVRIL----------GNGVVVIDWQQ 259
I IL + V D +Q
Sbjct: 240 IEAILRERRNITPGKDDDFHVRDMKQ 265
>gi|227533524|ref|ZP_03963573.1| ABC superfamily ATP binding cassette transporter, membrane
protein [Lactobacillus paracasei subsp. paracasei ATCC
25302]
gi|227188853|gb|EEI68920.1| ABC superfamily ATP binding cassette transporter, membrane
protein [Lactobacillus paracasei subsp. paracasei ATCC
25302]
Length = 396
Score = 42.1 bits (96), Expect = 0.087, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 30/47 (63%), Gaps = 6/47 (12%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFRE 55
+ +++R L +N++ S ++ +G++IG+ +++ +M++ NG +
Sbjct: 7 IRISFRALTANKRR------SLLTMLGIVIGITSVVTIMALGNGIKA 47
>gi|283797729|ref|ZP_06346882.1| putative permease [Clostridium sp. M62/1]
gi|291074624|gb|EFE11988.1| putative permease [Clostridium sp. M62/1]
gi|295092049|emb|CBK78156.1| ABC-type antimicrobial peptide transport system, permease component
[Clostridium cf. saccharolyticum K10]
Length = 450
Score = 42.1 bits (96), Expect = 0.088, Method: Composition-based stats.
Identities = 14/190 (7%), Positives = 52/190 (27%), Gaps = 7/190 (3%)
Query: 15 YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKY 74
L + F ++ +GV+IG +++V++S+ G ++ + I+
Sbjct: 13 NLRRRKLRTF------LTVLGVVIGTASIVVMVSLGIGLNNFTMENIRSSGSLTAIEIYN 66
Query: 75 YPLVDYQFI-ANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSF 133
Y ++ + + ++ + + L+ + + F
Sbjct: 67 YQNMNGEDVSEDKFMTDETIKSFAEIPHVTSVYPMLTMSVLMKQGAYEGYVTMTGVPLDF 126
Query: 134 SRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLG 193
+ + + + + + + + ++ V+
Sbjct: 127 MKDIPLGKGSRPSPNAEGLEMVVGNMVARNFSNSKTGKGYWDTGEEPDVDFMNRPMFVIF 186
Query: 194 MFRMRFPDYD 203
+
Sbjct: 187 DMNAYYQSQS 196
>gi|225621266|ref|YP_002722524.1| hypothetical protein BHWA1_02366 [Brachyspira hyodysenteriae WA1]
gi|225216086|gb|ACN84820.1| hypothetical protein BHWA1_02366 [Brachyspira hyodysenteriae WA1]
Length = 384
Score = 42.1 bits (96), Expect = 0.088, Method: Composition-based stats.
Identities = 33/243 (13%), Positives = 70/243 (28%), Gaps = 12/243 (4%)
Query: 36 VMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIK 95
++I ++++S N F ++ I + +G V+ + N L+ +
Sbjct: 3 LIIVSFVSLMMISGYNNFTKEGIITSINTSGGSVVIADKSYWDNKSEKINMLNNND--FE 60
Query: 96 VLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIG-- 153
+ + + + + + + G I
Sbjct: 61 AIYKKLDTINEVNDYQKKLDISGLIGNENKSKFFSGYAYEKPSKIMSSVSLKVGTPIFDD 120
Query: 154 ----KDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYM 209
L ++LG + +T G GI S +G+ + D +Y
Sbjct: 121 DISTMVLGKDLGEFFNLNYDEEPYLNLMTDFGDGINLGSLMAVGLISLNNSAADEITIYS 180
Query: 210 SLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHENIVRILGNG---VVVIDWQQRYQIFF 265
L F LE + V++KD E+ ++ + DW+
Sbjct: 181 PLNAVYEVFGLEYGNAHNLLVYLKDYKKAEEIKNDLNKYFNENNLNYEAKDWKDLNAFLL 240
Query: 266 SCY 268
S
Sbjct: 241 SVI 243
>gi|119720679|ref|YP_921174.1| hypothetical protein Tpen_1776 [Thermofilum pendens Hrk 5]
gi|119525799|gb|ABL79171.1| protein of unknown function DUF214 [Thermofilum pendens Hrk 5]
Length = 383
Score = 42.1 bits (96), Expect = 0.090, Method: Composition-based stats.
Identities = 42/243 (17%), Positives = 82/243 (33%), Gaps = 14/243 (5%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A +++ R F + + ++ + + GV + + + G R + V +
Sbjct: 4 WRLALKFV--ERDILFKKLIAALTILAIASGVATFVSLRILSLGSRTAAMNIVQQVLPGE 61
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
V+ + + + + +P V V P + +V +
Sbjct: 62 VVVYGQGLYDVSEDVLSDIKRLPGVKDVTPAILVTGYVG--------RNAVFLLGVRPED 113
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
++N SRF G I LAR LG+ +GDK+ + PYG +
Sbjct: 114 IKNVVSRFVDGQPFTGLTGAYAIADVGLARKLGLKVGDKVTVKPPYGTYFKQYEVVGIAE 173
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ + G + + L+EAQ VS V V+D ++ I +
Sbjct: 174 VAMK----IEEIGAAGGYLILPLREAQNLLGRPGYVSMAVVKVEDGVDPQEVKTLISLVY 229
Query: 249 GNG 251
Sbjct: 230 PGS 232
>gi|228995307|ref|ZP_04155007.1| ABC transporter, permease component [Bacillus pseudomycoides DSM
12442]
gi|228764441|gb|EEM13289.1| ABC transporter, permease component [Bacillus pseudomycoides DSM
12442]
Length = 856
Score = 42.1 bits (96), Expect = 0.091, Method: Composition-based stats.
Identities = 34/256 (13%), Positives = 80/256 (31%), Gaps = 9/256 (3%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
R E ++ R + NR+ A IS+A I G M+ ++ + + S+ G R+ + K +
Sbjct: 457 RIETSISSRNVIRNRQKAAISVA--ILSFGFMLALVGSMYMNSMQEGMRQGIKKSMPADL 514
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIP-DVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
V ++ I ++ + +
Sbjct: 515 SIRVPMLGRANEHIPFEWLEKIKQIKGVQNTAAIATDTKSELIDYDFKKADPEWYEFVRK 574
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN-----ILSPYGDVTP 179
+ + + + V G+ L L G + D
Sbjct: 575 NDVSPNIMEVSGIDLAAFNEIKKIKVASGRSLEEPLKEGEGILSKKTADYLGIKINDKIK 634
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+ + + + + V+++ + A+ F ++ S IE+ V I +
Sbjct: 635 VQSTGHEPQFIKITSILEQSLQMNTMGVFVNEEWAKKNFQIKGYES-IEIMVDSHKNINE 693
Query: 240 THENIVRILGNGVVVI 255
+ + +++ NG +
Sbjct: 694 IQQKVNQVMKNGTNIE 709
Score = 39.8 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 29/241 (12%), Positives = 68/241 (28%), Gaps = 19/241 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A + + NR S+ + + +GVM+ M L+ SV ++ + + ++
Sbjct: 4 FKYAIKSIKENRLRT--SLIALGTALGVMLATMLLLGNNSVEETVKQQVKNNY--GDYNL 59
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+++ I ++ V + + NS
Sbjct: 60 QFGYMKNDQYLDDKEVDQIKNIKNLKTVSKVLIPYVIPNKPEILNQPAYWGVEPNSPEIR 119
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
Y + K + + N + + K+
Sbjct: 120 AYKIDQGRYPEKGAEVAITKSYV---------------EKNGIKLGEKIEMPFPPFNKKT 164
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
TV+G+ + +Q Q NL+N + +++ + + I +L
Sbjct: 165 VTVVGIINPPTMSAMKQTAFFPIQWLQNELNLKNKYNLVQIKAANANEKALLVSEIKSVL 224
Query: 249 G 249
Sbjct: 225 N 225
>gi|162453098|ref|YP_001615465.1| hypothetical protein sce4822 [Sorangium cellulosum 'So ce 56']
gi|161163680|emb|CAN94985.1| hypothetical protein sce4822 [Sorangium cellulosum 'So ce 56']
Length = 403
Score = 42.1 bits (96), Expect = 0.091, Method: Composition-based stats.
Identities = 40/269 (14%), Positives = 96/269 (35%), Gaps = 32/269 (11%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AWR L SNR + ++ +G++IG A++ V+ + G R + R+ + ++++
Sbjct: 10 AWRSLASNRLR------TLLTMLGMIIGTAAVVAVLGIGEGARSSVEGRIRSLGANLLMV 63
Query: 72 QK----------YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ + A L + V V P SG A + ++S + +
Sbjct: 64 RPGSASASGVRSGTVKTLTEDDAEALKGLDGVAAVAPERSGSAQLRYMASNLNASVTGIT 123
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ S + ++ R + V++G ++AR L + +S T +
Sbjct: 124 PAYLEVRSLSVASGVSFSDLDEQQRARVVVLGANVARQLYAA------NVSASPLGTRLQ 177
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ + + + + V++ L + ++ +S I + + D +
Sbjct: 178 INGNAFRVVGVLAEKGSGMGSPDDGVFVPLSTHRSVLFGQDHLSTISLQLASEDRSDMVI 237
Query: 242 ENIVRIL----------GNGVVVIDWQQR 260
+ ++L + V +
Sbjct: 238 AQLEQLLRLRHRLRADQPSDFEVRSQAEM 266
>gi|239630789|ref|ZP_04673820.1| macrolide export ATP-binding/permease protein macB [Lactobacillus
paracasei subsp. paracasei 8700:2]
gi|239527072|gb|EEQ66073.1| macrolide export ATP-binding/permease protein macB [Lactobacillus
paracasei subsp. paracasei 8700:2]
Length = 402
Score = 42.1 bits (96), Expect = 0.091, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 30/47 (63%), Gaps = 6/47 (12%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFRE 55
+ +++R L +N++ S ++ +G++IG+ +++ +M++ NG +
Sbjct: 13 IRISFRALTANKRR------SLLTMLGIVIGITSVVTIMALGNGIKA 53
>gi|260060634|ref|YP_003193714.1| putative ABC transporter ATP-binding protein [Robiginitalea
biformata HTCC2501]
gi|88784764|gb|EAR15933.1| putative ATP-binding component of ABC transporter [Robiginitalea
biformata HTCC2501]
Length = 406
Score = 42.1 bits (96), Expect = 0.091, Method: Composition-based stats.
Identities = 33/236 (13%), Positives = 75/236 (31%), Gaps = 10/236 (4%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
+F++ +GV+ ++ LI ++ NG + + G + + + Y+
Sbjct: 11 TFLTTLGVIFAIVILIGLLGATNGMKNGFNQIFAGTATNSMFLWAQRTSMPYKGFERGRS 70
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
+ V + V +S RG + S + + D K
Sbjct: 71 VDLSMDDVDMILREVPEVDVISPRIQLGNFRGTVTVIRGGRSSGSSVYGDFPTIDLMSKK 130
Query: 149 GVIIGKDLARNLGISIGDKINI-LSPYGDVTPMGMGIRSKSYTVLGMFRM---------R 198
++ G+ L +N + I + Y + G +S + G++
Sbjct: 131 KMVEGRFLNQNDIQNSRKVCVIGVDAYKLLFDKGENAIGESVRINGVYFTVVGIFKRNDN 190
Query: 199 FPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVV 254
V++ Q FN + V + + V + ++ I +L +
Sbjct: 191 INFEGENTVFVPFTTFQTAFNSGDEVGWMAILVDEDKSVAVAENKIKALLKRKYNI 246
>gi|259500723|ref|ZP_05743625.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus iners DSM 13335]
gi|302190823|ref|ZP_07267077.1| ABC transporter permease protein [Lactobacillus iners AB-1]
gi|259167417|gb|EEW51912.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus iners DSM 13335]
Length = 813
Score = 42.1 bits (96), Expect = 0.092, Method: Composition-based stats.
Identities = 29/242 (11%), Positives = 71/242 (29%), Gaps = 19/242 (7%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
F + + R +F + F ++ +G+ L++ + + + +E + I
Sbjct: 436 SFSLKITARNVFRFKSRMF------MTILGIAGCCALLVMGLGIRDSLKEIADTQYGDII 489
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+ +I + + + V + +
Sbjct: 490 KYDLIALHNHQIPQNNSHYQSIINDNYVKRHTYINYKVCHTKQPHKFIDSNIQVITFADK 549
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ R N G II + LA+ + + +GDK+ Y
Sbjct: 550 NVLKKYFDLRNRRNKERYLLNSSGAIINEKLAKIMHVKVGDKLTFKDNYN---------- 599
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+T Y ++M+ + Q F + + +K + K +E ++
Sbjct: 600 ---HTKKVTISHICEMYLGHYLFMNRKTYQKVFQTSYTSNADMISLKSHKDLNKFNEKLL 656
Query: 246 RI 247
+
Sbjct: 657 KT 658
>gi|15639946|ref|NP_219399.1| hypothetical protein TP0962 [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189026185|ref|YP_001933957.1| hypothetical protein TPASS_0962 [Treponema pallidum subsp. pallidum
SS14]
gi|3323283|gb|AAC65917.1| conserved hypothetical integral membrane protein [Treponema
pallidum subsp. pallidum str. Nichols]
gi|189018760|gb|ACD71378.1| hypothetical integral membrane protein [Treponema pallidum subsp.
pallidum SS14]
gi|291060317|gb|ADD73052.1| putative efflux ABC transporter, permease protein [Treponema
pallidum subsp. pallidum str. Chicago]
Length = 410
Score = 42.1 bits (96), Expect = 0.092, Method: Composition-based stats.
Identities = 27/231 (11%), Positives = 68/231 (29%), Gaps = 13/231 (5%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIK-------RVLGINGHVVIQQKYYPLVDYQ 81
+ +SF+G+ +GV +++V+ S+ + + R++ + + +
Sbjct: 19 TTLSFLGIAVGVASVVVITSIGESLYASLAQSVGEGERRLIRVRPEWDYVKNEIMFQPTE 78
Query: 82 FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNS------FSR 135
RL + I+ + + S + G + L++ F
Sbjct: 79 SYRTRLVQSSEDIEGVFYNSSLKALISSPHTGGKERNITGVEPRWLELKDFKLEYGTFFS 138
Query: 136 FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMF 195
++ G ++ ++L + + + VL
Sbjct: 139 PADFKTHRHCAVIGGLLAQELFPEGNALGKRMTVTILSRASGAERALSFPFEIVGVLQEK 198
Query: 196 RMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ V++ + L +EV V+D I + I
Sbjct: 199 GSLISGIPSYRVFVPREFISLEMGAGRVADAVEVCVRDVQVIAAAEKRIRE 249
>gi|312794514|ref|YP_004027437.1| hypothetical protein Calkr_2382 [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312181654|gb|ADQ41824.1| protein of unknown function DUF214 [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 398
Score = 42.1 bits (96), Expect = 0.093, Method: Composition-based stats.
Identities = 32/244 (13%), Positives = 71/244 (29%), Gaps = 7/244 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + L N+ F +S +GV+IG A+IV + ++ + K++
Sbjct: 9 AFKIAAKSLIHNKTRTF------LSILGVIIGTCAIIVSVGLVQSVSISVSKQLEESGLD 62
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+I Y + + + V+ + P + V V + S +
Sbjct: 63 SLILVLNYDIDMSEMYSYLNSKQNLVVGITPKKTYYTEVLSYDGKKYKCEVLLLKPSSYI 122
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
D ++ V I + + K + I +
Sbjct: 123 LENLKLVEGRFLSGLDEEKLNKVAIVFK-DQAEKLFNNKKEVLFKKLLIGGEEFEVIGTV 181
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ Y + + + + + FNLE + + + + +
Sbjct: 182 TKQKRMTDVSIGTSYYDINIIIPYKVGESLFNLEKSSQMFFIKSINSKYNSNIKKLLEEY 241
Query: 248 LGNG 251
L N
Sbjct: 242 LRNN 245
>gi|330837301|ref|YP_004411942.1| hypothetical protein Spico_1354 [Spirochaeta coccoides DSM 17374]
gi|329749204|gb|AEC02560.1| protein of unknown function DUF214 [Spirochaeta coccoides DSM
17374]
Length = 393
Score = 42.1 bits (96), Expect = 0.094, Method: Composition-based stats.
Identities = 32/243 (13%), Positives = 69/243 (28%), Gaps = 8/243 (3%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A ++ N+ + +S +G++IGV A++ ++++ + + + + ++
Sbjct: 6 IKLALASMWQNKMR------TLLSLLGIVIGVAAVVAILTLGDSAKRSITDSIASGGLNL 59
Query: 69 VIQQKYYPLV-DYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ +F + + I + V G + S L G +S +
Sbjct: 60 ISIYPNRQDKAATEFTEDFGITLMRNIDGIDSVMGISSGSALIRHGQQSKQAAVSGVPST 119
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
Y Q + +
Sbjct: 120 YAQVNNYEAEEGEFFSMMDNINRR-QVIVLGADIAEDLFPAGDAIGQYVSLFRRQAKSYL 178
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
V+ F N VY+ Q F N V V V + ++I
Sbjct: 179 VVGVMKEKDAGFAGAYNTNVYIPYNTFQQRFQATNNVGSYLVDVSENADTSLVTKDITSY 238
Query: 248 LGN 250
L N
Sbjct: 239 LDN 241
>gi|320546976|ref|ZP_08041277.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Streptococcus equinus ATCC 9812]
gi|320448378|gb|EFW89120.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Streptococcus equinus ATCC 9812]
Length = 410
Score = 42.1 bits (96), Expect = 0.094, Method: Composition-based stats.
Identities = 21/144 (14%), Positives = 50/144 (34%), Gaps = 6/144 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A + ++ +F ++ +G++IGV +++V+M++ G + N ++
Sbjct: 5 WKFALSSIMGHKMRSF------LTTLGIIIGVASVVVIMALGEGMTNQVTNMFASDNQNI 58
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
I D + D + Q S L + L G +++
Sbjct: 59 QIYYTTKKSDDMDIFDDEDPTASDKGPQIKEEWLQKITSELPGVTNYYLTNGTTSTVEGN 118
Query: 129 LQNSFSRFYGNVSNDFDRGKGVII 152
+ S + V+ + K +
Sbjct: 119 QKKSKNVNITGVNKTYFAVKKFKV 142
>gi|126656747|ref|ZP_01727961.1| hypothetical protein CY0110_23951 [Cyanothece sp. CCY0110]
gi|126621967|gb|EAZ92675.1| hypothetical protein CY0110_23951 [Cyanothece sp. CCY0110]
Length = 423
Score = 42.1 bits (96), Expect = 0.094, Method: Composition-based stats.
Identities = 33/260 (12%), Positives = 76/260 (29%), Gaps = 21/260 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A L SN+ + ++ +GV+IG+ ++I + SV G ++ + + + +V
Sbjct: 20 LSMAITALLSNKLR------TLLTMLGVIIGIASVIAITSVGQGVQKATEQEIQSLGTNV 73
Query: 69 VIQQKYYPLV-------------DYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSG 115
+ + + V ++ +
Sbjct: 74 LQIFPGQARTGGISQGLGSTSTLIKEDAQVIQKQVSSAQVVSAYLQRPGQIVYQQDNHGT 133
Query: 116 VLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYG 175
+V SN + + I+G + L +
Sbjct: 134 NIVGIDSNYLEARNTKLTRGRFFTQEELDSATPVTILGNTVLNELFGEDSQPLGQKIRIE 193
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD 235
+G+ K + + R + + AV+GI V V+D
Sbjct: 194 GNIYEIIGVFEKKGSEGSIDRDDQVFIPLSNMSSRIFGNNSLSGT--AVNGIYVKVRDEK 251
Query: 236 AIEKTHENIVRILGNGVVVI 255
+E+ I +L + +
Sbjct: 252 RMEEAEFQITNLLRSRHNLS 271
>gi|147920314|ref|YP_685915.1| ABC transporter permease [uncultured methanogenic archaeon RC-I]
gi|110621311|emb|CAJ36589.1| predicted ABC-type transport system, permease component [uncultured
methanogenic archaeon RC-I]
Length = 408
Score = 42.1 bits (96), Expect = 0.094, Method: Composition-based stats.
Identities = 30/236 (12%), Positives = 73/236 (30%), Gaps = 14/236 (5%)
Query: 27 IASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANR 86
+ +S +G++IGVMA++ +MS+ +G + ++ + +I +
Sbjct: 19 FKTLMSSLGIIIGVMAIVAMMSISDGVFSGVSAEFGDLDLNQIILLPQSLEDQSGGMGMS 78
Query: 87 LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDR 146
F + G V + + SYL + S +S ++
Sbjct: 79 YGIAQTSKPPARFTDRDIQTILSTPGVVEVNPKIEAYGTVSYLSENRSLSIQGISPQNEK 138
Query: 147 GKGVIIGKDLARNLGISI-----GDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPD 201
+ K + N P T + I ++ + +
Sbjct: 139 KLAATLDKGRFLSPSDRYSVVIGSKIANGTFPKNIRTGSTLTIYNQMTGKSQDYTVVGIL 198
Query: 202 YDNGMVYMSLQEAQLYFNLENAVSG---------IEVFVKDPDAIEKTHENIVRIL 248
++ ++ + + +SG I + + PD +++ + L
Sbjct: 199 KESNGSIVTGNPNSYIYMTQAGISGFATQDYYDIIYITCESPDRVDEIAAAVKENL 254
>gi|57167636|ref|ZP_00366776.1| ABC transporter, ATP-binding protein [Campylobacter coli RM2228]
gi|57020758|gb|EAL57422.1| ABC transporter, ATP-binding protein [Campylobacter coli RM2228]
Length = 641
Score = 42.1 bits (96), Expect = 0.094, Method: Composition-based stats.
Identities = 30/243 (12%), Positives = 76/243 (31%), Gaps = 9/243 (3%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A+ + +++ S ++ +G++IG+ +++ V+++ G + +++ + + +
Sbjct: 250 LKIAYSSILAHKLR------SILTMLGIIIGIASVVCVVALGLGSQAKVLESIARLGTNT 303
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + D + RL+F +SG + +S
Sbjct: 304 IEIRPGKGFGDLRSGKTRLNFSDLETLRSLDYLEAVDAHSNTSGVATYTNISLSARAEGV 363
Query: 129 LQNSFSR---FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
N+F+ + + +
Sbjct: 364 GVNNFAIEGLKLQVGRILNNEDIETNANVAVLDFNAKKNLFPRQKSEDVLGRVVIFNSQP 423
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
K VL + + + +YM + + I V VKD + I+
Sbjct: 424 FKIIGVLQKDTEKPIEDNVVRLYMPYTTLMNKLTGDRNLREIIVKVKDDVSSTLAENAII 483
Query: 246 RIL 248
RIL
Sbjct: 484 RIL 486
>gi|315654183|ref|ZP_07907099.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus iners ATCC 55195]
gi|315488879|gb|EFU78525.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus iners ATCC 55195]
Length = 813
Score = 41.7 bits (95), Expect = 0.096, Method: Composition-based stats.
Identities = 29/242 (11%), Positives = 71/242 (29%), Gaps = 19/242 (7%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
F + + R +F + F ++ +G+ L++ + + + +E + I
Sbjct: 436 SFSLKITARNVFRFKSRMF------MTILGIAGCCALLVMGLGIRDSLKEIADTQYGDII 489
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+ +I + + + V + +
Sbjct: 490 KYDLIALHNHQIPQNNSHYQSIINDNYVKRHTYINYKVCHTKQPHKFIDSNIQVITFADK 549
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ R N G II + LA+ + + +GDK+ Y
Sbjct: 550 NVLKKYFDLRNRRNKERYLLNSSGAIINEKLAKIMHVKVGDKLTFKDNYN---------- 599
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+T Y ++M+ + Q F + + +K + K +E ++
Sbjct: 600 ---HTKKVTISHICEMYLGHYLFMNRKTYQKVFQTSYTSNADMISLKSHKDLNKFNEKLL 656
Query: 246 RI 247
+
Sbjct: 657 KT 658
>gi|260666127|gb|ACX47903.1| MoaC [Streptococcus anginosus]
Length = 1121
Score = 41.7 bits (95), Expect = 0.096, Method: Composition-based stats.
Identities = 31/253 (12%), Positives = 61/253 (24%), Gaps = 21/253 (8%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
F V R +F ++ ++ GV V L + M+ E M R G
Sbjct: 742 SFAQKVTARNIFRYKQRM------LMTIFGVAGSVALLFAGLG-MSSSMEGMGNRQYGEI 794
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+ A + D Q + G
Sbjct: 795 IKYDAVISQKQHLKSDEQAAINHLLADKKIAKKHGIYQETFTKKIKGAKDEQ-------- 846
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ G F L + ++ + + V
Sbjct: 847 ----SLALFVTTGKDFYHFIELYDSQSKASLNLSSHGAVISQKLATIMHVSVGDAFELKS 902
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD--AIEKTHEN 243
+ Y ++M+ Q F + + + +KD ++ T
Sbjct: 903 DEGKRYKIKVSGITEMYAGHFIFMNQDYYQTVFARKFQENAYLIKLKDSSSKNVQDTAAA 962
Query: 244 IVRILGNGVVVID 256
+++ G VV +
Sbjct: 963 FMKLTGVRAVVQN 975
>gi|116619122|ref|YP_819493.1| peptide ABC transporter permease [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
gi|116097969|gb|ABJ63120.1| ABC-type antimicrobial peptide transport system, permease
component [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 393
Score = 41.7 bits (95), Expect = 0.097, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 32/49 (65%), Gaps = 6/49 (12%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
++R L SN++ S ++ IG++IG+ ++I ++S+ +G R +M+K
Sbjct: 10 SFRSLISNKRR------SILTMIGIIIGIASVITILSLGDGARIEMLKN 52
>gi|294787756|ref|ZP_06753000.1| macrolide export ATP-binding/permease protein MacB [Simonsiella
muelleri ATCC 29453]
gi|294484049|gb|EFG31732.1| macrolide export ATP-binding/permease protein MacB [Simonsiella
muelleri ATCC 29453]
Length = 645
Score = 41.7 bits (95), Expect = 0.098, Method: Composition-based stats.
Identities = 27/230 (11%), Positives = 77/230 (33%), Gaps = 2/230 (0%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ A++ V+++ G +E ++ + + + + D + +
Sbjct: 269 SLLTMLGIIIGIAAVVSVVALGKGSQEKILADINSMGTNTISIYPGKGFGDRRSGKIKTL 328
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
+ D + ++ ++S G+ ++ + + + G +
Sbjct: 329 TVADSQAISKLNYVESTTPSVNSSGTLTYRNTDLSASMNGAGSQYFDVRGLKLDKGRLFN 388
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVL--GMFRMRFPDYDNGM 206
+ ++ + K + + + + + F D+
Sbjct: 389 DEDVQENAQVVVIDDNTAKKLFTDGQNPLGKVVLFKKRPLTVIGVLKKDDNPFGGSDSLN 448
Query: 207 VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
+Y + +SGI V VKD + + I +L + D
Sbjct: 449 LYTPYTTLMNQISGSKFISGISVKVKDNIDSQIAEKGIKELLLSRHGTED 498
>gi|157151478|ref|YP_001450051.1| ABC transporter ATP-binding protein [Streptococcus gordonii str.
Challis substr. CH1]
gi|157076272|gb|ABV10955.1| ABC transporter, ATP-binding protein [Streptococcus gordonii str.
Challis substr. CH1]
Length = 424
Score = 41.7 bits (95), Expect = 0.098, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 32/59 (54%), Gaps = 10/59 (16%)
Query: 13 WRY----LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
WR+ + ++ +F ++ IG++IGV +++V+M++ NG ++ + K +
Sbjct: 4 WRFAIGSIMGHKMRSF------LTMIGIIIGVASVVVIMALGNGMQQGVTKSFTKDQQY 56
>gi|309807841|ref|ZP_07701773.1| efflux ABC transporter, permease protein [Lactobacillus iners
LactinV 01V1-a]
gi|308168943|gb|EFO71029.1| efflux ABC transporter, permease protein [Lactobacillus iners
LactinV 01V1-a]
Length = 813
Score = 41.7 bits (95), Expect = 0.099, Method: Composition-based stats.
Identities = 29/242 (11%), Positives = 71/242 (29%), Gaps = 19/242 (7%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
F + + R +F + F ++ +G+ L++ + + + +E + I
Sbjct: 436 SFSLKITARNVFRFKSRMF------MTILGIAGCCALLVMGLGIRDSLKEIADTQYGDII 489
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+ +I + + + V + +
Sbjct: 490 KYDLIALHNHQIPQNNSHYQSIINNNYVKRHTYINYKVCHTKQPHKFIDSNIQVIAFADK 549
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ R N G II + LA+ + + +GDK+ Y
Sbjct: 550 NVLKKYFDLRNRKNKERYLLNSSGAIINEKLAKIMHVKVGDKLTFKDNYN---------- 599
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+T Y ++M+ + Q F + + +K + K +E ++
Sbjct: 600 ---HTKKVTISHICEMYLGHYLFMNRKTYQKVFQTSYTSNADMLSLKSHKDLNKFNEKLL 656
Query: 246 RI 247
+
Sbjct: 657 KT 658
>gi|262282665|ref|ZP_06060433.1| ABC transporter ATP-binding protein [Streptococcus sp. 2_1_36FAA]
gi|262261956|gb|EEY80654.1| ABC transporter ATP-binding protein [Streptococcus sp. 2_1_36FAA]
Length = 424
Score = 41.7 bits (95), Expect = 0.099, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 32/59 (54%), Gaps = 10/59 (16%)
Query: 13 WRY----LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
WR+ + ++ +F ++ IG++IGV +++V+M++ NG ++ + K +
Sbjct: 4 WRFAIGSIMGHKMRSF------LTMIGIIIGVASVVVIMALGNGMQQGVTKSFTKDQQY 56
>gi|118580634|ref|YP_901884.1| ABC transporter related [Pelobacter propionicus DSM 2379]
gi|118503344|gb|ABK99826.1| ABC transporter related protein [Pelobacter propionicus DSM 2379]
Length = 652
Score = 41.7 bits (95), Expect = 0.099, Method: Composition-based stats.
Identities = 33/243 (13%), Positives = 80/243 (32%), Gaps = 9/243 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + S+R + ++ +G++IG+ +++ V+++ G R+ +I + + +
Sbjct: 262 AFKMALIAMASHRMR------TLLTMLGIIIGITSVVSVVALGQGARQKVINDISAMGTN 315
Query: 68 VVIQQKYYPLVDYQFIANR--LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
V+ D + + + +K +V +G + + +
Sbjct: 316 VIDINPGKDWGDEDAADIQTLVPADLEALKAQVYVDSTTPSTGGTQLLRYHNITANATVS 375
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
Q + Y + + + + P G V +G
Sbjct: 376 GVGEQYFRVKGYKTAQGAPFGSDDIKRQAQVVVIDQNTRKKFFKDIDPVGKVLFVGSLPC 435
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
F N V++ A E S I V V+D + + ++I+
Sbjct: 436 RVMAVTKEKDG-PFGSSQNLEVWIPYSAAMSRLLGEQYFSSITVRVRDGFSNQIAEQSII 494
Query: 246 RIL 248
++L
Sbjct: 495 KLL 497
>gi|312873543|ref|ZP_07733592.1| efflux ABC transporter, permease protein [Lactobacillus iners LEAF
2052A-d]
gi|311090939|gb|EFQ49334.1| efflux ABC transporter, permease protein [Lactobacillus iners LEAF
2052A-d]
Length = 813
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 29/242 (11%), Positives = 71/242 (29%), Gaps = 19/242 (7%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
F + + R +F + F ++ +G+ L++ + + + +E + I
Sbjct: 436 SFSLKITARNVFRFKSRMF------MTILGIAGCCALLVMGLGIRDSLKEIADTQYGDII 489
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+ +I + + + V + +
Sbjct: 490 KYDLIALHNHQIPQNNSHYQSIINDNYVKRHTYINYKVCHTKQPHKFIDSNIQVIAFADK 549
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ R N G II + LA+ + + +GDK+ Y
Sbjct: 550 NVLKKYFDLRNRRNKERYLLNSSGAIINEKLAKIMHVKVGDKLTFKDNYN---------- 599
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+T Y ++M+ + Q F + + +K + K +E ++
Sbjct: 600 ---HTKKVTISHICEMYLGHYLFMNRKTYQKVFQTSYTSNADMISLKSHKDLNKFNEKLL 656
Query: 246 RI 247
+
Sbjct: 657 KT 658
>gi|309809789|ref|ZP_07703643.1| efflux ABC transporter, permease protein [Lactobacillus iners SPIN
2503V10-D]
gi|308169968|gb|EFO72007.1| efflux ABC transporter, permease protein [Lactobacillus iners SPIN
2503V10-D]
Length = 813
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 29/242 (11%), Positives = 71/242 (29%), Gaps = 19/242 (7%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
F + + R +F + F ++ +G+ L++ + + + +E + I
Sbjct: 436 SFSLKITARNVFRFKSRMF------MTILGIAGCCALLVMGLGIRDSLKEIADTQYGDII 489
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+ +I + + + V + +
Sbjct: 490 KYDLIALHNHQIPQNNSHYQSIINDNYVKRHTYINYKVCHTKQPHKFIDSNIQVIAFADK 549
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ R N G II + LA+ + + +GDK+ Y
Sbjct: 550 NVLKKYFDLRNRRNKERYLLNSSGAIINEKLAKIMHVKVGDKLTFKDNYN---------- 599
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+T Y ++M+ + Q F + + +K + K +E ++
Sbjct: 600 ---HTKKVTISHICEMYLGHYLFMNRKTYQKVFQTSYTSNADMISLKSHKDLNKFNEKLL 656
Query: 246 RI 247
+
Sbjct: 657 KT 658
>gi|260589550|ref|ZP_05855463.1| macrolide export ATP-binding/permease protein MacB [Blautia
hansenii DSM 20583]
gi|331082976|ref|ZP_08332096.1| hypothetical protein HMPREF0992_01020 [Lachnospiraceae bacterium
6_1_63FAA]
gi|260540118|gb|EEX20687.1| macrolide export ATP-binding/permease protein MacB [Blautia
hansenii DSM 20583]
gi|330399971|gb|EGG79629.1| hypothetical protein HMPREF0992_01020 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 411
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 32/75 (42%), Gaps = 6/75 (8%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A + + +N+ +F ++ +G++IG+ ++I ++S+ G + M + G +
Sbjct: 9 KMAIQNIIANKGRSF------LTMLGIIIGIASVIAIVSIGEGTKNQMNSEIDAAGGGQI 62
Query: 70 IQQKYYPLVDYQFIA 84
+
Sbjct: 63 FIYCSDDAIKEDAYM 77
>gi|150400301|ref|YP_001324068.1| hypothetical protein Mevan_1564 [Methanococcus vannielii SB]
gi|150013004|gb|ABR55456.1| protein of unknown function DUF214 [Methanococcus vannielii SB]
Length = 397
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 34/269 (12%), Positives = 85/269 (31%), Gaps = 16/269 (5%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ A + + + S ++ +G++IG++A++ ++S+ G + + +
Sbjct: 1 MNLKDIISF--AGKNITQKKTQ------SLLTIVGIVIGILAIVSLISLGYGVQNYITEE 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ +V+ N +K + V G V SG S V R
Sbjct: 53 ISTAGANVITILPSKDFGSMSSAKNF---NERDLKAVEKVRGIESVLYGWSGASIVKYRD 109
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + + + + D + +
Sbjct: 110 QESYSYVFATKPSTYQEFYTGAYGYGLESGRWMNDNDKYSCVIGYSLSKTAFNREIRIGD 169
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ I + Y V+G+ D+ V + + + F + + + V+ + K
Sbjct: 170 RIEIGDRKYKVVGILAQVGNPNDDNAVVIPYEAGEELFEVNKEYNFMAALVRPNTDVIKI 229
Query: 241 HENIVRIL-----GNGVVVIDWQQRYQIF 264
E+I + + V+ +Q +
Sbjct: 230 SEDIKKEIEKSRGDENFSVLTSEQLAESI 258
>gi|46200077|ref|YP_005744.1| ABC transporter permease protein [Thermus thermophilus HB27]
gi|55980180|ref|YP_143477.1| lipoprotein releasing system transmembrane protein [Thermus
thermophilus HB8]
gi|46197705|gb|AAS82117.1| ABC transporter permease protein [Thermus thermophilus HB27]
gi|55771593|dbj|BAD70034.1| lipoprotein releasing system transmembrane protein [Thermus
thermophilus HB8]
Length = 371
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 25/72 (34%), Gaps = 5/72 (6%)
Query: 195 FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVV 254
FR D+G + L+ + LE G +V +KDP + + G+
Sbjct: 165 FRTGNYLIDSGFAFTDLESVKRLSGLE--AQGYQVRLKDPWRAREVGWALA---GSRFFP 219
Query: 255 IDWQQRYQIFFS 266
WQ +
Sbjct: 220 QPWQDTQRTLLE 231
>gi|322385814|ref|ZP_08059457.1| ABC superfamily ATP binding cassette transporter, membrane
protein [Streptococcus cristatus ATCC 51100]
gi|321270099|gb|EFX53016.1| ABC superfamily ATP binding cassette transporter, membrane
protein [Streptococcus cristatus ATCC 51100]
Length = 418
Score = 41.7 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
A + ++ AF ++ IG++IGV +++V++++ NG ++ + K + +
Sbjct: 4 FKFAISSILGHKMRAF------LTMIGIIIGVASVVVILALGNGMQQGVTKSITKEQKY 56
>gi|322370566|ref|ZP_08045124.1| hypothetical protein ZOD2009_13786 [Haladaptatus paucihalophilus
DX253]
gi|320549983|gb|EFW91639.1| hypothetical protein ZOD2009_13786 [Haladaptatus paucihalophilus
DX253]
Length = 420
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
V ++WR + ++ S ++ +GV+IGV A+I +++ + D++ V G N
Sbjct: 6 SVRISWRNIREHKLR------STLTTLGVIIGVAAVITFVTLGASLQADIVNTVAGGN 57
>gi|270261300|ref|ZP_06189573.1| hypothetical protein SOD_a05300 [Serratia odorifera 4Rx13]
gi|270044784|gb|EFA17875.1| hypothetical protein SOD_a05300 [Serratia odorifera 4Rx13]
Length = 646
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 28/260 (10%), Positives = 76/260 (29%), Gaps = 9/260 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A + + ++R + ++ G++ G+ A++ V+++ G ++ + + + +
Sbjct: 257 SLQMALKAMNAHRLR------TALTMTGIIFGIAAVVTVVALGEGAKQRTLANIKDLGTN 310
Query: 68 VVIQQK-YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
VV D L +S + + S
Sbjct: 311 VVSIYPGRDFFDDAIDSIRTLVPADADALASQSFVDSVSPEVSASDSIRFRSKSATASIT 370
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
++ F + +++ + + + +
Sbjct: 371 GVGRDYFRVNGLTLLQGTTFRDDRSALQEVIIDENARNSLFGDFGIAPLGQIVFLGAVPA 430
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ V+ + + V+M + +S I V +KD E I +
Sbjct: 431 RVVGVVKSN--QDSAPNRISVWMPYTTVMYRMVGKPTLSSIGVRLKDDVDNEAAVGAISQ 488
Query: 247 ILGNGVVVIDWQQRYQIFFS 266
+L V D+ + F
Sbjct: 489 LLTQRHGVKDFMLFNRDKFR 508
>gi|167746241|ref|ZP_02418368.1| hypothetical protein ANACAC_00946 [Anaerostipes caccae DSM 14662]
gi|167654234|gb|EDR98363.1| hypothetical protein ANACAC_00946 [Anaerostipes caccae DSM 14662]
Length = 1048
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 43/243 (17%), Positives = 81/243 (33%), Gaps = 21/243 (8%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
F R LF +K F ++ G+ G MAL++V GF L +
Sbjct: 669 NFTWKSTLRNLFRYKKRFF------MTIFGIG-GCMALLLV-----GF-------GLKDS 709
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+ + +Y ++ Y D + + Q + SS + +
Sbjct: 710 IFAISKNQYQNIMTYDASVTLEDDLSAKKEQEIASWIQKQHTIPSSTKIRSVSVDLEFDG 769
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
S + F + + R K I G+ + I + + +
Sbjct: 770 DSKSASLFVPEDAKGLSSYIRFKDRISGEKYRLSDNGIILTEKVCSLLGIKIGDTVIIKE 829
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ TV +Y + +YMS Q + E + ++ +KD D EKT ++
Sbjct: 830 GETKTVRAKVEHITENYMHHNIYMSKDLYQKLYGEEPEYN--QILLKDKDRSEKTETDLG 887
Query: 246 RIL 248
+ L
Sbjct: 888 KGL 890
>gi|149371444|ref|ZP_01890930.1| ABC transporter, permease protein [unidentified eubacterium
SCB49]
gi|149355582|gb|EDM44141.1| ABC transporter, permease protein [unidentified eubacterium
SCB49]
Length = 406
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 10/65 (15%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A + + N+ + ++ +G++IGV ++I ++++ G +E + + + ++
Sbjct: 7 FKIAMKAIILNKTR------TLLTMLGIIIGVASVIAMLAIGEGSKESIRTSISAMGSNM 60
Query: 69 VIQQK 73
+ Q
Sbjct: 61 ITIQP 65
>gi|11498622|ref|NP_069850.1| hypothetical protein AF1017 [Archaeoglobus fulgidus DSM 4304]
gi|2649577|gb|AAB90225.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
Length = 377
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 29/247 (11%), Positives = 77/247 (31%), Gaps = 25/247 (10%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
S+ + +A R L + S ++ IG++IGVMA + + + + + +
Sbjct: 1 MSKMYLELAKRNLQRAKVR------SLLAVIGILIGVMA-VSAIGIFGESLKAAVLQNFE 53
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ +I + + I + V + ++ + S +
Sbjct: 54 DVANELIVSPNFQEGYKYLDEKDISRIKKLPNVAEAIPIKSDSLLVESKKKKSYAVVYAM 113
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + ++GK LA I + KI I V +
Sbjct: 114 D-----EKDVEDMFKAEKGSIRLKSSCVVGKRLAEFADIRVNSKITIAGREFRVAAILED 168
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
++ N + +S ++ + ++ + + V + + ++ +
Sbjct: 169 TGARFDIN-----------PNSAIILSPEDFEKVSDV--GYTMLIVKAESLEKVDDVKKE 215
Query: 244 IVRILGN 250
I + +
Sbjct: 216 IEEKINS 222
>gi|315425341|dbj|BAJ47007.1| hypothetical conserved protein [Candidatus Caldiarchaeum
subterraneum]
Length = 418
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 30/249 (12%), Positives = 84/249 (33%), Gaps = 12/249 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
++++ + R + + + V IGV ++I ++S G ++ +++++ +
Sbjct: 7 LMLSLKPWSERRVR------AALLVVAVAIGVASVIALVSQTAGVQQAVVRQLQTLGPTA 60
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
++ L IP++ V+P +S + ++S LV +
Sbjct: 61 IVITPIGRTQLTDADIALLSSIPNIQDVIPMLSTRVYISRAGQDVELTLVGVDPLKLEAL 120
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
L + R + + G ++A + +I++ R
Sbjct: 121 LGD--VRLIEGQLYPPAQVPIGVAGYEVAYPPTLGGVQEISVSQALFVEQRAQSFTRRIP 178
Query: 189 YTVL---GMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ + +G ++M + + N + + I V + ++ + +
Sbjct: 179 LMISGILDRYGASAFVSIDGSIFMPIDMLKTILNRRD-YNLILVRADTAENVQLVVDQLT 237
Query: 246 RILGNGVVV 254
I G +
Sbjct: 238 TIYGERARI 246
>gi|167950862|ref|ZP_02537936.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 264
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 6/32 (18%), Positives = 14/32 (43%)
Query: 238 EKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + +G + DW +++ FFS +
Sbjct: 7 PQVSRQLALKMGGYYRISDWTMQHRNFFSALQ 38
>gi|126178444|ref|YP_001046409.1| hypothetical protein Memar_0494 [Methanoculleus marisnigri JR1]
gi|125861238|gb|ABN56427.1| protein of unknown function DUF214 [Methanoculleus marisnigri JR1]
Length = 399
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 41/257 (15%), Positives = 82/257 (31%), Gaps = 19/257 (7%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F F A R L + I S +S IG++IGV+A I + VM ++ V+
Sbjct: 1 MFFSF----AARNLRRH------WIRSALSIIGIVIGVVA-IASLGVMGNSINLLVANVI 49
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
G ++ + + R + V + ++ V V +
Sbjct: 50 TDVGDTIVITPHTAIGGTFAGDPR-----TAVDAAIPVREVEEIRRAANPHRTVPVLQGA 104
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ S +++D I R + + Y +
Sbjct: 105 DEVEFGRGESGYTQIIGLASDDIPILLEIADGQYPRQNQPGALVGTYLAAEYDVAPGFRL 164
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGM---VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
I ++S V G+ R D + + + +F + + V V + + I+
Sbjct: 165 TIGNESIRVAGVLAERGFAADINPDYAIVVPDGWYESHFGARDTYPMVIVRVGNAEEIDA 224
Query: 240 THENIVRILGNGVVVID 256
E I + ++D
Sbjct: 225 VKEAIDSRINRREEIVD 241
>gi|22125377|ref|NP_668800.1| ATP-binding component of a transport system [Yersinia pestis KIM
10]
gi|45442402|ref|NP_993941.1| putative ABC transporter ATP-binding protein [Yersinia pestis
biovar Microtus str. 91001]
gi|108808184|ref|YP_652100.1| putative ABC transporter ATP-binding protein [Yersinia pestis
Antiqua]
gi|108811545|ref|YP_647312.1| ABC transporter, ATP-binding protein [Yersinia pestis Nepal516]
gi|145599384|ref|YP_001163460.1| ABC transporter, ATP-binding protein [Yersinia pestis Pestoides F]
gi|149365135|ref|ZP_01887170.1| putative ABC transporter, ATP-binding protein [Yersinia pestis
CA88-4125]
gi|162420262|ref|YP_001607148.1| efflux ABC transporter ATP-binding/permease [Yersinia pestis
Angola]
gi|165926909|ref|ZP_02222741.1| efflux ABC transporter, ATP-binding/permease protein [Yersinia
pestis biovar Orientalis str. F1991016]
gi|165935903|ref|ZP_02224473.1| efflux ABC transporter, ATP-binding/permease protein [Yersinia
pestis biovar Orientalis str. IP275]
gi|166011279|ref|ZP_02232177.1| efflux ABC transporter, ATP-binding/permease protein [Yersinia
pestis biovar Antiqua str. E1979001]
gi|166212272|ref|ZP_02238307.1| efflux ABC transporter, ATP-binding/permease protein [Yersinia
pestis biovar Antiqua str. B42003004]
gi|167399083|ref|ZP_02304607.1| efflux ABC transporter, ATP-binding/permease protein [Yersinia
pestis biovar Antiqua str. UG05-0454]
gi|167422721|ref|ZP_02314474.1| efflux ABC transporter, ATP-binding/permease protein [Yersinia
pestis biovar Orientalis str. MG05-1020]
gi|167424750|ref|ZP_02316503.1| efflux ABC transporter, ATP-binding/permease protein [Yersinia
pestis biovar Mediaevalis str. K1973002]
gi|218930049|ref|YP_002347924.1| putative ABC transporter ATP-binding protein [Yersinia pestis CO92]
gi|229838592|ref|ZP_04458751.1| putative ABC transporter, ATP-binding protein [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229895660|ref|ZP_04510831.1| putative ABC transporter, ATP-binding protein [Yersinia pestis
Pestoides A]
gi|229899158|ref|ZP_04514301.1| putative ABC transporter, ATP-binding protein [Yersinia pestis
biovar Orientalis str. India 195]
gi|229901814|ref|ZP_04516936.1| putative ABC transporter, ATP-binding protein [Yersinia pestis
Nepal516]
gi|270490004|ref|ZP_06207078.1| ABC transporter, ATP-binding protein [Yersinia pestis KIM D27]
gi|294504753|ref|YP_003568815.1| putative ABC transporter, ATP-binding protein [Yersinia pestis
Z176003]
gi|122064301|sp|Q1CJW8|MACB1_YERPN RecName: Full=Macrolide export ATP-binding/permease protein MacB 1
gi|122064305|sp|Q1C5W7|MACB2_YERPA RecName: Full=Macrolide export ATP-binding/permease protein MacB 2
gi|122064306|sp|Q7CJG3|MACB2_YERPE RecName: Full=Macrolide export ATP-binding/permease protein MacB 2
gi|21958261|gb|AAM85051.1|AE013751_3 putative ATP-binding component of a transport system [Yersinia
pestis KIM 10]
gi|45437267|gb|AAS62818.1| putative ABC transporter, ATP-binding protein [Yersinia pestis
biovar Microtus str. 91001]
gi|108775193|gb|ABG17712.1| ABC transporter, ATP-binding protein [Yersinia pestis Nepal516]
gi|108780097|gb|ABG14155.1| putative ABC transporter, ATP-binding protein [Yersinia pestis
Antiqua]
gi|115348660|emb|CAL21604.1| putative ABC transporter, ATP-binding protein [Yersinia pestis
CO92]
gi|145211080|gb|ABP40487.1| ABC transporter, ATP-binding protein [Yersinia pestis Pestoides F]
gi|149291548|gb|EDM41622.1| putative ABC transporter, ATP-binding protein [Yersinia pestis
CA88-4125]
gi|162353077|gb|ABX87025.1| efflux ABC transporter, ATP-binding/permease protein [Yersinia
pestis Angola]
gi|165916048|gb|EDR34655.1| efflux ABC transporter, ATP-binding/permease protein [Yersinia
pestis biovar Orientalis str. IP275]
gi|165921260|gb|EDR38484.1| efflux ABC transporter, ATP-binding/permease protein [Yersinia
pestis biovar Orientalis str. F1991016]
gi|165989957|gb|EDR42258.1| efflux ABC transporter, ATP-binding/permease protein [Yersinia
pestis biovar Antiqua str. E1979001]
gi|166206203|gb|EDR50683.1| efflux ABC transporter, ATP-binding/permease protein [Yersinia
pestis biovar Antiqua str. B42003004]
gi|166958428|gb|EDR55449.1| efflux ABC transporter, ATP-binding/permease protein [Yersinia
pestis biovar Orientalis str. MG05-1020]
gi|167051587|gb|EDR62995.1| efflux ABC transporter, ATP-binding/permease protein [Yersinia
pestis biovar Antiqua str. UG05-0454]
gi|167056632|gb|EDR66401.1| efflux ABC transporter, ATP-binding/permease protein [Yersinia
pestis biovar Mediaevalis str. K1973002]
gi|229681743|gb|EEO77837.1| putative ABC transporter, ATP-binding protein [Yersinia pestis
Nepal516]
gi|229687560|gb|EEO79633.1| putative ABC transporter, ATP-binding protein [Yersinia pestis
biovar Orientalis str. India 195]
gi|229694958|gb|EEO85005.1| putative ABC transporter, ATP-binding protein [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229701466|gb|EEO89494.1| putative ABC transporter, ATP-binding protein [Yersinia pestis
Pestoides A]
gi|262362815|gb|ACY59536.1| putative ABC transporter, ATP-binding protein [Yersinia pestis
D106004]
gi|262366739|gb|ACY63296.1| putative ABC transporter, ATP-binding protein [Yersinia pestis
D182038]
gi|270338508|gb|EFA49285.1| ABC transporter, ATP-binding protein [Yersinia pestis KIM D27]
gi|294355212|gb|ADE65553.1| putative ABC transporter, ATP-binding protein [Yersinia pestis
Z176003]
gi|320014444|gb|ADV98015.1| putative ABC transporter, ATP-binding protein [Yersinia pestis
biovar Medievalis str. Harbin 35]
Length = 678
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 21/235 (8%), Positives = 73/235 (31%), Gaps = 2/235 (0%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
+ ++ +G++IG+ +++ V+++ G ++ ++ + + + D + A
Sbjct: 302 TALTMLGIIIGIASVVSVVALGKGSQQQVLANINAMGTSTLEIFPGKDFGDMRSAAIHTL 361
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
D + + +S+ + + + + + G
Sbjct: 362 RDTDADVLAQQGYIHSVTPTVSTSVTLRYGNKSVSGTVNGVGEQYFLVRGYTIAQGMAFT 421
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS--KSYTVLGMFRMRFPDYDNGM 206
+ + + + + + + + V + F +N
Sbjct: 422 RTSVNDLMQDAVIDENTRDKLFPNGETPLGKVILLGSLPCRVIGVAAKKQSGFGSDENLN 481
Query: 207 VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRY 261
V++ A ++ + I V V D + + ++++L D+
Sbjct: 482 VWIPYTTAMKRMLGQSYLKSITVRVNDDIDLANAEQGVIKLLSQRHGTQDFFVMN 536
>gi|89890131|ref|ZP_01201642.1| ABC transporter efflux protein [Flavobacteria bacterium BBFL7]
gi|89518404|gb|EAS21060.1| ABC transporter efflux protein [Flavobacteria bacterium BBFL7]
Length = 418
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 27/265 (10%), Positives = 75/265 (28%), Gaps = 21/265 (7%)
Query: 1 MSIFSRF---EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDM 57
M I+ AW L +N F +S +GV IG+ ++I V++ ++ +++
Sbjct: 1 MLIYLSLLKESFSFAWSALRTNLLRTF------LSLLGVTIGIFSIIGVLAAVDSLEQEI 54
Query: 58 IKRVLGINGHVVIQ----------QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVS 107
+ ++ + ++Y + + + + ++ F +
Sbjct: 55 NDGLSSLDISTIYVLKVSFGPTELERYQYENFPNVSYDEFQMLKRSMDDIDAITYTMFSA 114
Query: 108 GLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK 167
+ G+S + + F + V ++
Sbjct: 115 PENIKFEDKTATGVSIVPGTNEFYDLENLKLDQGRFFSESESVSGAPVAVIGYEVAQNLF 174
Query: 168 INILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN--AVS 225
N V G + + ++ + + + N +
Sbjct: 175 KNTNPLGKRVRLYGNKFTIIGVISKQGSGLDLGAPKDESAFIPVNFVRKIYGDNNKSKTT 234
Query: 226 GIEVFVKDPDAIEKTHENIVRILGN 250
+ + K ++ + + L N
Sbjct: 235 ALILKPKKGVDQDEFIATLEQKLRN 259
>gi|51597040|ref|YP_071231.1| ABC transporter permease/ATP-binding protein [Yersinia
pseudotuberculosis IP 32953]
gi|153949894|ref|YP_001400290.1| efflux ABC transporter ATP-binding protein/permease [Yersinia
pseudotuberculosis IP 31758]
gi|170023664|ref|YP_001720169.1| ABC transporter-like protein [Yersinia pseudotuberculosis YPIII]
gi|186896123|ref|YP_001873235.1| ABC transporter-like protein [Yersinia pseudotuberculosis PB1/+]
gi|81825763|sp|Q668L6|MACB2_YERPS RecName: Full=Macrolide export ATP-binding/permease protein MacB 2
gi|51590322|emb|CAH21959.1| ABC transporter(efflux), fused permease and ATP-binding domains
[Yersinia pseudotuberculosis IP 32953]
gi|152961389|gb|ABS48850.1| efflux ABC transporter, ATP-binding/permease protein [Yersinia
pseudotuberculosis IP 31758]
gi|169750198|gb|ACA67716.1| ABC transporter related [Yersinia pseudotuberculosis YPIII]
gi|186699149|gb|ACC89778.1| ABC transporter related [Yersinia pseudotuberculosis PB1/+]
Length = 678
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 21/235 (8%), Positives = 73/235 (31%), Gaps = 2/235 (0%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
+ ++ +G++IG+ +++ V+++ G ++ ++ + + + D + A
Sbjct: 302 TALTMLGIIIGIASVVSVVALGKGSQQQVLANINAMGTSTLEIFPGKDFGDMRSAAIHTL 361
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
D + + +S+ + + + + + G
Sbjct: 362 RDTDADVLAQQGYIHSVTPTVSTSVTLRYGNKSVSGTVNGVGEQYFLVRGYTIAQGMAFT 421
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS--KSYTVLGMFRMRFPDYDNGM 206
+ + + + + + + + V + F +N
Sbjct: 422 RTSVNDLMQEAVIDENTRDKLFPNGETPLGKVILLGSLPCRVIGVAAKKQSGFGSDENLN 481
Query: 207 VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRY 261
V++ A ++ + I V V D + + ++++L D+
Sbjct: 482 VWIPYTTAMKRMLGQSYLKSITVRVNDDIDLANAEQGVIKLLSQRHGTQDFFVMN 536
>gi|325578273|ref|ZP_08148408.1| ABC superfamily ATP binding cassette transporter, ABC/membrane
protein [Haemophilus parainfluenzae ATCC 33392]
gi|325160009|gb|EGC72138.1| ABC superfamily ATP binding cassette transporter, ABC/membrane
protein [Haemophilus parainfluenzae ATCC 33392]
Length = 643
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 28/221 (12%), Positives = 68/221 (30%), Gaps = 1/221 (0%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG ++ +++ + GI + D + +
Sbjct: 268 SLLTMLGIIIGITSVVSVVALGNGSQQKILENIKGIGTSTMTIFNGTGFGDRRAEQMQNL 327
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY-LQNSFSRFYGNVSNDFDRG 147
I D + Q+ SS G+ + +S + + G +
Sbjct: 328 TINDATALNQQSYVQSVTPNSSSSGTLIYGNQTFSSTSLKGVGEQYFDVDGLKLKSGNLF 387
Query: 148 KGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMV 207
+ + L K + R + + + +
Sbjct: 388 SAQDVADNNQVALIDESAKKSIFPDENPIGKIVMFNKRPLRIIGVVSDKQMGGASSSLNL 447
Query: 208 YMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
Y + + I V V D + I +L
Sbjct: 448 YAPYTTVMNRISGSKKIGSITVKVDDSVNTTVAEKGITELL 488
>gi|224984517|ref|YP_002642005.1| efflux ABC transporter, permease protein [Borrelia burgdorferi 64b]
gi|223929476|gb|ACN24189.1| efflux ABC transporter, permease protein [Borrelia burgdorferi 64b]
Length = 409
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 98/267 (36%), Gaps = 21/267 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A+ +F + + + I + + V+ L+V + MN RE M K + +GH+
Sbjct: 2 FKLAFYNIFRDLRR------TIILSLLLASSVVFLLVFVGYMNFSREGMEKSFVSSSGHI 55
Query: 69 VIQQKYYPLVDYQFIANRL-----------DFIPDVIKVLPFVSGQAFVSGLSSGGSGVL 117
I ++ Y + + N L + I ++ F L + +
Sbjct: 56 QIAKENYFNPKFSNLKNGLLLEEKDINLIRNEIDSYDELQSTNLIVNFDGLLGNSSTSNP 115
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
V + D + +S S G ++G +LA + GI + N
Sbjct: 116 VFAFAYEDPDIITSSLSLLEGEPIFHDSNAGEFLLGSNLASSFGIEKITETNSDLTLMTN 175
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
+G G+ ++ V G+ + F DN +++ + F E I+VF+KD +
Sbjct: 176 -LLGRGLNFQNIKVAGIIKFPFSTADNIFAITTIKTLKDLFAFEGGAHVIQVFLKDSSTL 234
Query: 238 EKTHENI---VRILGNGVVVIDWQQRY 261
E + + + G DW +
Sbjct: 235 ETFKKKLDNFKKNKGISFDYNDWFEIN 261
>gi|319763066|ref|YP_004127003.1| hypothetical protein Alide_2381 [Alicycliphilus denitrificans BC]
gi|330825145|ref|YP_004388448.1| hypothetical protein Alide2_2575 [Alicycliphilus denitrificans
K601]
gi|317117627|gb|ADV00116.1| protein of unknown function DUF214 [Alicycliphilus denitrificans
BC]
gi|329310517|gb|AEB84932.1| protein of unknown function DUF214 [Alicycliphilus denitrificans
K601]
Length = 403
Score = 41.7 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 37/265 (13%), Positives = 89/265 (33%), Gaps = 20/265 (7%)
Query: 14 RYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQK 73
R + N +F ++ +G++IGV A+I ++++ NG + ++ + +++ +
Sbjct: 12 RSIRRNLMRSF------LTVLGIVIGVSAVITMVTLGNGATLAVQAQIASLGTNLLQVRP 65
Query: 74 YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSF 133
+ D + + G V+ + + + G + + +
Sbjct: 66 GQRMGPGGGSGAPAFKDVDADAIAQQIGGILAVAPEARTSATAVAGGRNWTTSVLGSTNA 125
Query: 134 SRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLG 193
G+ + R + A I + + DV + +R S V+G
Sbjct: 126 WLQTGSWTLASGREFTSDEQRVGAAVCLIGQTVRRELFGAGADVLGERVRVRQFSCEVVG 185
Query: 194 MFRMRFPDYDNGM----VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL- 248
+ + V + L+ Q V + V ++D E+ ++ +L
Sbjct: 186 VLASKGQGAFGNDQDDLVLLPLKTLQRRVIGSTRVPTLLVSMQDGSDPERVKSSLTELLR 245
Query: 249 ---------GNGVVVIDWQQRYQIF 264
+ V+D +Q F
Sbjct: 246 ERRKLSESDDDNFNVLDTKQLADTF 270
>gi|301156176|emb|CBW15647.1| fused macrolide transporter subunits of ABC superfamily:
ATP-binding component/membrane component [Haemophilus
parainfluenzae T3T1]
Length = 643
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 29/221 (13%), Positives = 69/221 (31%), Gaps = 1/221 (0%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG ++ +++ + GI + D + +
Sbjct: 268 SLLTMLGIIIGITSVVSVVALGNGSQQKILENIKGIGTSTMTIFNGTGFGDRRAEQMQNL 327
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY-LQNSFSRFYGNVSNDFDRG 147
I D I + Q+ SS G+ + +S + + G +
Sbjct: 328 TINDAIALNQQSYVQSVTPNSSSSGTLIYGNQTFSSTSLKGVGEQYFDVDGLKLKSGNLF 387
Query: 148 KGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMV 207
+ + L K + R + + + +
Sbjct: 388 SAQDVADNNQVALIDESAKKSIFPDENPIGKIVMFNKRPLRIIGVVSDKQMGGASSSLNL 447
Query: 208 YMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
Y + + I V V D + I +L
Sbjct: 448 YAPYTTVMNRISGSKKIGSITVKVDDSVNTTVAEKGITELL 488
>gi|167467559|ref|ZP_02332263.1| efflux ABC transporter, ATP-binding/permease protein [Yersinia
pestis FV-1]
Length = 622
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 21/235 (8%), Positives = 73/235 (31%), Gaps = 2/235 (0%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
+ ++ +G++IG+ +++ V+++ G ++ ++ + + + D + A
Sbjct: 246 TALTMLGIIIGIASVVSVVALGKGSQQQVLANINAMGTSTLEIFPGKDFGDMRSAAIHTL 305
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
D + + +S+ + + + + + G
Sbjct: 306 RDTDADVLAQQGYIHSVTPTVSTSVTLRYGNKSVSGTVNGVGEQYFLVRGYTIAQGMAFT 365
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS--KSYTVLGMFRMRFPDYDNGM 206
+ + + + + + + + V + F +N
Sbjct: 366 RTSVNDLMQDAVIDENTRDKLFPNGETPLGKVILLGSLPCRVIGVAAKKQSGFGSDENLN 425
Query: 207 VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRY 261
V++ A ++ + I V V D + + ++++L D+
Sbjct: 426 VWIPYTTAMKRMLGQSYLKSITVRVNDDIDLANAEQGVIKLLSQRHGTQDFFVMN 480
>gi|325959002|ref|YP_004290468.1| hypothetical protein Metbo_1254 [Methanobacterium sp. AL-21]
gi|325330434|gb|ADZ09496.1| protein of unknown function DUF214 [Methanobacterium sp. AL-21]
Length = 350
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 7/58 (12%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A++ + + S ++ +G++IG ++V++ + G ++ ++
Sbjct: 5 KLAFKNIRRKKLR------SALTALGIIIGAATIVVLLGIGAGATSEVQEQTNQYMYD 56
>gi|78188315|ref|YP_378653.1| ATPase [Chlorobium chlorochromatii CaD3]
gi|122064320|sp|Q3ATR5|MACB_CHLCH RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|78170514|gb|ABB27610.1| ATPase [Chlorobium chlorochromatii CaD3]
Length = 657
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 41/277 (14%), Positives = 96/277 (34%), Gaps = 22/277 (7%)
Query: 4 FSRFEVIVA--WRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+ R VA + + +N+ S +S +G+++GV ++I +M++ G R M + +
Sbjct: 254 YKRLSGFVAQAMQAILANKMR------SLLSMLGILVGVASVIAMMALGEGARVAMQEEL 307
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ +++ + + V V + + V S +G
Sbjct: 308 KAMGSNMLSVRGGSAKIRGTSQGAGAVTRFTVKDVEAIAALRPLVRNASGVVNGSARVVY 367
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
N ++S YG + ++L R ++I +G+ P+G
Sbjct: 368 GNRNWSSSLLGAGYDYGTMRAALPTVGRWFTAEELQRRDKVAIIGVTVARELFGESNPLG 427
Query: 182 MGIRSKSYTVLGMFRMRF-----PDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
I+ + P ++ +V + L A + +SGI V V +
Sbjct: 428 KTIKINRINFTVIGLAPAKGFVGPQDEDDIVMIPLSTAMYRVLGRDYLSGIFVEVAEAHR 487
Query: 237 IEKTHENIVRIL---------GNGVVVIDWQQRYQIF 264
+++ + I + + + D + ++
Sbjct: 488 VDEARQRIAAFIRQRHRLPVDDDSFYIRDMTEIQKML 524
>gi|251792498|ref|YP_003007224.1| macrolide export ATP-binding/permease MacB [Aggregatibacter
aphrophilus NJ8700]
gi|247533891|gb|ACS97137.1| macrolide export ATP-binding/permease protein MacB [Aggregatibacter
aphrophilus NJ8700]
Length = 605
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 32/250 (12%), Positives = 84/250 (33%), Gaps = 11/250 (4%)
Query: 4 FSRFEVIVAWRY----LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
FS+ +++ A+R + +++ S ++ +G++IG+ +++ V+++ NG ++ +++
Sbjct: 207 FSKDQLMEAFRMSVSAIVAHKMR------SLLTMLGIIIGITSVVSVVALGNGSQQKILE 260
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
+ GI + + D + + + D + Q+ +S G+ +
Sbjct: 261 NIKGIGTNTMTIFNGTGFGDRRAEQMQNLTVNDSNALSNQSYVQSVTPNSASSGTLIYGN 320
Query: 120 GISNSDFSY-LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
+S + + G I ++ + L K
Sbjct: 321 QTFSSTSLKGVGEQYFDVEGLTLKLGSTFTQEDIRENHSVALIDESTKKSIFPHENPLGK 380
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+ R + R + +Y + ++ I V V D
Sbjct: 381 IVMFNKRPLRIIGVVSDRQIGGASSSLNIYAPYSTVMNKISGSKKIASITVKVSDSVNSA 440
Query: 239 KTHENIVRIL 248
+ I +L
Sbjct: 441 VAEKGITELL 450
>gi|315222500|ref|ZP_07864389.1| efflux ABC transporter, permease protein [Streptococcus anginosus
F0211]
gi|315188186|gb|EFU21912.1| efflux ABC transporter, permease protein [Streptococcus anginosus
F0211]
Length = 1126
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 31/258 (12%), Positives = 63/258 (24%), Gaps = 23/258 (8%)
Query: 3 IFSRFEV--IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
I+ R V R +F ++ ++ GV V L + M+ E + R
Sbjct: 742 IWHRLSFTQKVTARNIFRYKQRM------LMTIFGVAGSVALLFAGLG-MSSSMEGIGNR 794
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
G + A + D Q + G
Sbjct: 795 QYGEIIKYDAVISQKHHLKSDEQAAINHLLADKKIAKKHGIYQETFTKKIKGAKDEQ--- 851
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ G F L + ++ + + V
Sbjct: 852 ---------SLALFVTTGKDFYHFIELYDSQSKASLNLSSHGAVISQKLATIMHVSVGDT 902
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD--AIE 238
+ Y ++M+ Q F + + + +KD ++
Sbjct: 903 FEVTSDEGKRYKIKVSGIAEMYAGHFIFMNQDYYQTVFARKFQENAYLIKLKDSSSKNVQ 962
Query: 239 KTHENIVRILGNGVVVID 256
T +++ G VV +
Sbjct: 963 DTAAAFMKLTGVRAVVQN 980
>gi|86133907|ref|ZP_01052489.1| lipoprotein releasing transmembrane protein [Polaribacter sp.
MED152]
gi|85820770|gb|EAQ41917.1| lipoprotein releasing transmembrane protein [Polaribacter sp.
MED152]
Length = 457
Score = 41.7 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 10/46 (21%), Positives = 27/46 (58%), Gaps = 6/46 (13%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDM 57
A R + +N+ + ++ +G++ GV A+I ++++ NG +++
Sbjct: 17 AVRVILANKVR------TLLTSLGIIFGVAAVITMLAIGNGAEKEI 56
>gi|257065805|ref|YP_003152061.1| hypothetical protein Apre_0289 [Anaerococcus prevotii DSM 20548]
gi|256797685|gb|ACV28340.1| protein of unknown function DUF214 [Anaerococcus prevotii DSM
20548]
Length = 457
Score = 41.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 40/274 (14%), Positives = 87/274 (31%), Gaps = 36/274 (13%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGF----RED 56
M I RF +A R L + + ++ + V+IG ++I++++ G ++
Sbjct: 1 MKISDRF--QMALRNLVRRKSR------TVLTVLSVVIGASSIILMIAFALGINQQQKDM 52
Query: 57 MIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
+ + ++ + Q +RL I V V+PF S + + +
Sbjct: 53 VESFGGLTSITILTENNGGSTKVDQASISRLQSIDGVKVVVPFKSFYSEIKIEGEDDYSL 112
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
+ D + + F + +I+G ++ + G +
Sbjct: 113 DSQIQVMPDDVIDKLTGDMFSSGSKMNRTDDNKIILGSEVRPMKMVREGGGYSG------ 166
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
+ F R Y + + + + F EN +G E K P
Sbjct: 167 -------------EPVEDFDYRGHKYFIRLGWQDENDDGVNFGNENQENGEE---KKPTY 210
Query: 237 IEKTHENIVRILGNGVVVIDWQQ-RYQIFFSCYE 269
+ I L + V+ W + + +
Sbjct: 211 AD-IPVEISGTLNSKSFVMGWSSVINESLYKKLQ 243
>gi|220927922|ref|YP_002504831.1| hypothetical protein Ccel_0469 [Clostridium cellulolyticum H10]
gi|219998250|gb|ACL74851.1| protein of unknown function DUF214 [Clostridium cellulolyticum H10]
Length = 405
Score = 41.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 34/262 (12%), Positives = 78/262 (29%), Gaps = 18/262 (6%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M+I A L +N+ S ++ IG+++GV ++I ++++ N + +
Sbjct: 1 MNIIE--SFKQALSSLRANKLR------SVLTMIGIIMGVFSVITIVAIGNATQSYVDSE 52
Query: 61 V-------LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGG 113
L ++ L A +
Sbjct: 53 FAKIGANILIVSYKTSSLNTNDMLKSDDLKAISKSVKEIKNVGTDINRSGTIRLDNKTRN 112
Query: 114 SGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSP 173
+ + D ++ + R + N VI + N G +
Sbjct: 113 ASINGISSQYKDIVPVEMAQGRMINEIDNSTRSNVVVIDEEFAKANFGNQDPIGQKLKVT 172
Query: 174 YGDVTPMGMGIRSKSYTVLGMF-RMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK 232
G + + + + + F M + + + + Q Y + + I V V
Sbjct: 173 LGSGSTLRLRVVGVTKIEETPFGGMIDNESRPVRLTIPMTTLQSYHPDSDQFNYIYVSVD 232
Query: 233 DPDA--IEKTHENIVRILGNGV 252
+ D ++K + I + L +
Sbjct: 233 EKDKTVLKKIADKITKTLESKH 254
>gi|82702083|ref|YP_411649.1| hypothetical protein Nmul_A0954 [Nitrosospira multiformis ATCC
25196]
gi|82410148|gb|ABB74257.1| Protein of unknown function DUF214 [Nitrosospira multiformis ATCC
25196]
Length = 399
Score = 41.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 8/69 (11%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
MS+ A R L ++R + +S G+ IG+ A+I++ S+ G + +I
Sbjct: 1 MSVIDTLRF--ALRSLTAHRLR------TLLSATGIGIGIAAVILLTSIGEGIHQFVISE 52
Query: 61 VLGINGHVV 69
+++
Sbjct: 53 FTQFGTNII 61
>gi|330505723|ref|YP_004382592.1| ATP-binding/permease fusion ABC transporter [Pseudomonas mendocina
NK-01]
gi|328920009|gb|AEB60840.1| ATP-binding/permease fusion ABC transporter [Pseudomonas mendocina
NK-01]
Length = 648
Score = 41.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
AWR L +R + ++ +G++IGV ++IV+++V G R+ ++ + + +++
Sbjct: 264 AWRVLLIHR------FRTALTLLGIVIGVASVIVMLAVGEGARQKVVAEMGVMGANLMY 316
>gi|283954112|ref|ZP_06371637.1| macrolide-specific efflux protein macB [Campylobacter jejuni subsp.
jejuni 414]
gi|283794391|gb|EFC33135.1| macrolide-specific efflux protein macB [Campylobacter jejuni subsp.
jejuni 414]
Length = 641
Score = 41.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 29/243 (11%), Positives = 75/243 (30%), Gaps = 9/243 (3%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A+ + +++ S ++ +G++IG+ +++ V+++ G + +++ + + +
Sbjct: 250 FKIAYSSILAHKLR------SVLTMLGIIIGIASVVCVVALGLGSQAKVLESIARLGTNT 303
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + D + RL+F +SG + +S
Sbjct: 304 IEIRPGKGFGDLRSGKTRLNFSDLETLRSLEYLEAVDAYSNTSGVATYTNISLSARAEGV 363
Query: 129 LQNSFSR---FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
N+F+ + + +
Sbjct: 364 GANNFAIEGLRIDAGRILNNDDVKNSTNVAVLDFNAKKNLFPAEKSENILGRVVLFNSQP 423
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
K VL + + + +Y+ + + I V VKD + I+
Sbjct: 424 FKIIGVLQKNTDKPIEDNVVRLYIPYTTLMNKLTGDRNLREIIVKVKDEVSSTLAENAII 483
Query: 246 RIL 248
RIL
Sbjct: 484 RIL 486
>gi|296109993|ref|YP_003616942.1| protein of unknown function DUF214 [Methanocaldococcus infernus ME]
gi|295434807|gb|ADG13978.1| protein of unknown function DUF214 [Methanocaldococcus infernus ME]
Length = 363
Score = 41.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 24/241 (9%), Positives = 68/241 (28%), Gaps = 32/241 (13%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A R L ++ + ++ +G+++GV I + ++ + I++ G +
Sbjct: 3 LEMAKRNLMRHKLR------TILALLGIIVGVAT-ITTLGILGESAKVGIEKNFGDVANY 55
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
++ + F L + + + + + V VR
Sbjct: 56 ILIFPNWMAGVKYFTDKDLLKLRGIGGKVIPIKETYDSIYIVGKNKHVEVRIFGIKKDEI 115
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ N D + S +V
Sbjct: 116 KYLNLDIKLSNTQTAVD-----------------------SFFSELHEVKKGDTIKIKNI 152
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ + ++ + ++ L + I ++V + + I++ I + L
Sbjct: 153 SFRISSLYNSTFIIPRNSIILTERSFNRFYKL--NYTRIAIYVPNMNKIKEVQNEIDKRL 210
Query: 249 G 249
Sbjct: 211 N 211
>gi|313201032|ref|YP_004039690.1| hypothetical protein MPQ_1291 [Methylovorus sp. MP688]
gi|312440348|gb|ADQ84454.1| conserved hypothetical protein [Methylovorus sp. MP688]
Length = 406
Score = 41.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 37/253 (14%), Positives = 87/253 (34%), Gaps = 16/253 (6%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AW + +NR F ++ +G++IGV A++++M++ G + + K + + ++ I
Sbjct: 9 AWHAMGANRLRTF------LTMLGMVIGVGAVVLMMAIGQGAEQAVKKSIQSMGSNLFIV 62
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
P + A +V + + V N+ + +
Sbjct: 63 LAGPPNMGGARSATGNAPSLNVKDAAAMEDLEGVSNVAPINMGSAQVIYAGNNWNTSI-I 121
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTV 191
+ Y +V + V D+ +++ K + + +GD P+G IR K
Sbjct: 122 GTTPSYLDVRSWNLSDGYVFSDSDIRSATRVALIGKTVVQNLFGDDDPVGKTIRIKDSPF 181
Query: 192 L------GMFRMRFPDYDNGMVYMSLQEAQLYF---NLENAVSGIEVFVKDPDAIEKTHE 242
+ + + + + L +Q +V I V + +
Sbjct: 182 IILGVLDNKGQSLDGRDQDDTIIIPLTTSQRRVFGAQFSGSVRQIIVQADSDKVMPMVED 241
Query: 243 NIVRILGNGVVVI 255
++ +L +
Sbjct: 242 SLNSLLRQRHRIR 254
>gi|291518728|emb|CBK73949.1| hypothetical protein CIY_11090 [Butyrivibrio fibrisolvens 16/4]
Length = 223
Score = 41.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A + +N+ AF ++ +G++IGV A+I +M+V N + + K++ +
Sbjct: 7 KLAIISIKANKMRAF------LTMLGIIIGVAAVIAIMTVGNSMTKGIQKQLESYGVQNI 60
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQA 104
D + ++ + +VL S
Sbjct: 61 DVYITPIDYDAELSDADIENMELKPEVLHKFSDNF 95
>gi|262196705|ref|YP_003267914.1| hypothetical protein Hoch_3519 [Haliangium ochraceum DSM 14365]
gi|262080052|gb|ACY16021.1| protein of unknown function DUF214 [Haliangium ochraceum DSM 14365]
Length = 416
Score = 41.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 32/251 (12%), Positives = 68/251 (27%), Gaps = 18/251 (7%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
L N+ + ++ +GV+ G+ LIV++ NG + + G + V
Sbjct: 14 LRRNKLR------TVLTAVGVLWGIFILIVMLGAGNGLENGVNSSMSGFARNAVFVWGQR 67
Query: 76 PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSR 135
+ Y + + V +G ++ L+ R S SF+
Sbjct: 68 TSLPYAGLKPGRRVRFNNGDVDALRAGVPAIAHLAPRNQMGGFRAGSLVRRGTKTGSFTV 127
Query: 136 FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYG------------DVTPMGMG 183
+ + ++ G+ L + I P D G
Sbjct: 128 SGDYPAIQHIQPIRLLEGRFLNQLDIDERRKVAVIGRPVKEQLFAAEEPAVGDAIAAGGV 187
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ +V++ Q F+ + V + +
Sbjct: 188 YFQVIGVFESPQGGERGERQAQVVHVPFTTFQQAFHQGDQVGFFALTADPSVGAAEIETQ 247
Query: 244 IVRILGNGVVV 254
I +L +
Sbjct: 248 IKTVLAGRHRI 258
>gi|312126703|ref|YP_003991577.1| hypothetical protein Calhy_0463 [Caldicellulosiruptor
hydrothermalis 108]
gi|311776722|gb|ADQ06208.1| protein of unknown function DUF214 [Caldicellulosiruptor
hydrothermalis 108]
Length = 392
Score = 41.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 33/252 (13%), Positives = 82/252 (32%), Gaps = 19/252 (7%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M+ F+ +A + + SN+ +F ++ +GV+IG+ A+I V+ + G + + R
Sbjct: 1 MAQFA-LAFKMAIKSILSNKLRSF------LTMLGVIIGIWAVIAVVGLAQGSTKSITDR 53
Query: 61 VLGINGHVVIQQ----KYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
+ + +++ V Y+ + + D I+ + + +
Sbjct: 54 LQRLGTNLIQINITGRNSNRNVTYEELQQFAEQHQDDIEAIAPTVSSSVTLKYGTNTHDT 113
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
+ G + + + S + D D + V + + + I
Sbjct: 114 TLVGTTADYSTVRDVNVSSGRFILPIDVDYRQKVALVGTYIVKDLFNGQNPIGKKIKING 173
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
+G+ + D+ V + + AQ + + + D +
Sbjct: 174 QIFTVVGVLEERANS-------QEQSDDDQVIVPVTVAQRLTR-NAIIRNFAIKITDGNR 225
Query: 237 IEKTHENIVRIL 248
E + L
Sbjct: 226 SEAVMNYLNDFL 237
>gi|42524549|ref|NP_969929.1| ABC-type lipoprotein transporter, permease protein. [Bdellovibrio
bacteriovorus HD100]
gi|39576758|emb|CAE80922.1| ABC-type lipoprotein transporter, permease protein [Bdellovibrio
bacteriovorus HD100]
Length = 402
Score = 41.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 40/219 (18%), Positives = 76/219 (34%), Gaps = 19/219 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVM----SVMNGFREDMIKRVLGI 64
+ ++WR LF N + ++ S V +G L++ VMN +RE++I G
Sbjct: 5 LKISWRNLFRNPRR------TWASLCTVALGAAGLLIYQGFNTGVMNQYRENVIHGYYGY 58
Query: 65 N----GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + P + A+ ++ + V + G L
Sbjct: 59 GQVFPQNYFGKVHETPWKLWFENADEIEKQIRSSASVTEVFPRVSFYSFIVKGGITLGGK 118
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
F+ +D +I+GK LA ++ GD + +L+ +
Sbjct: 119 GEGVIPERENKFFTEMNFIEGHDLQGQDQIILGKGLAESIDAKTGDVVTLLTQTVNGQLN 178
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFN 219
G TV G+F D+ + L++AQ +
Sbjct: 179 GA-----DLTVAGIFFTGKKVIDDSFYRVDLKQAQALLD 212
>gi|146297443|ref|YP_001181214.1| hypothetical protein Csac_2446 [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145411019|gb|ABP68023.1| protein of unknown function DUF214 [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 392
Score = 41.3 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 34/252 (13%), Positives = 82/252 (32%), Gaps = 19/252 (7%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M+ F+ +A + + SN+ +F ++ +GV+IG+ A+I V+ + G + + R
Sbjct: 1 MAQFA-LAFKMAIKSILSNKLRSF------LTMLGVIIGIWAVIAVVGLAQGSTKSITDR 53
Query: 61 VLGINGHVVIQQ----KYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
+ + +++ V Y+ + D D I+ + + +
Sbjct: 54 LQRLGTNLIQINITGRNSNRNVTYEELQQFADQHADDIEAIAPTVSSSVTLKYGTNTHDT 113
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
+ G + + + S + D D + V + + + I
Sbjct: 114 TLIGTTADYSTVRDVNVSSGRFILPIDVDYRQKVALVGTYIVKDLFNGQNPIGQKIKING 173
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
+G+ + D+ V + + AQ + + + D +
Sbjct: 174 QIFTVVGVLEERANS-------QEQSDDDQVIVPVTVAQRLTR-NAIIRNFAIKITDGNR 225
Query: 237 IEKTHENIVRIL 248
E + L
Sbjct: 226 SEAVMNYLNDFL 237
>gi|255535953|ref|YP_003096324.1| ABC transporter permease protein [Flavobacteriaceae bacterium
3519-10]
gi|255342149|gb|ACU08262.1| ABC transporter permease protein [Flavobacteriaceae bacterium
3519-10]
Length = 422
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 29/253 (11%), Positives = 66/253 (26%), Gaps = 19/253 (7%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDM---------IKRVLGING 66
L +N+ F ++ IGV G+ +V++ G L
Sbjct: 17 LRNNKLRTF------LTMIGVGWGMFLFVVLLGAAKGMENGFDKIFAGFATNSIFLWAQN 70
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
+ + + + ++ +P + + ++S Q S G +
Sbjct: 71 TTIPYEGFPKGRKMDLHLSDIEMLPRKVGEIDYISPQNSRGNFGSPGESFSRNAKKATYT 130
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
F R + I N + P+G +
Sbjct: 131 LTGDYPIGNKISQKKLIFGRYLNDADVTGSKNVIVIGEEIYKNFFDAKKNENPIGKSVNV 190
Query: 187 KSYTV----LGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
K + + ++ ++ L +N + V + K + K +
Sbjct: 191 KGIFFSVIGVFRAQKGGGPENDQSAFIPLSTFTKMYNDGDKVGFFAIVSKPNADLAKVED 250
Query: 243 NIVRILGNGVVVI 255
+ L + V
Sbjct: 251 QVKLELKDKYNVS 263
>gi|325981535|ref|YP_004293937.1| hypothetical protein NAL212_0848 [Nitrosomonas sp. AL212]
gi|325531054|gb|ADZ25775.1| protein of unknown function DUF214 [Nitrosomonas sp. AL212]
Length = 407
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
A R L NR + ++ +G++IGV A+++++S+ G R + + + + +
Sbjct: 10 ALRALRQNRLR------TGLTMLGMIIGVAAVVLMLSIGQGARTKINETIAAMGSN 59
>gi|325062576|gb|ADY66266.1| macrolide export ATP-binding/permease protein macB [Agrobacterium
sp. H13-3]
Length = 652
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 26/252 (10%), Positives = 83/252 (32%), Gaps = 9/252 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A + +++ +F ++ +G++IG+ ++I V+++ G ++ +++ + + +
Sbjct: 260 ALRMALLSMQAHKLRSF------LTMLGIIIGIASVISVVALGQGSQQRVLQNISSLGTN 313
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + + D + A +S+ + +N+ +
Sbjct: 314 TLEIFAGKDFGDIRSGKITTLVVSDAEALAKQSYVAAVTPTVSTSSTVRFGAKEANALVN 373
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVII---GKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + G + + +++ + N + +
Sbjct: 374 GVSERYFVAKGTKLSQGRFFDTASVVQKAQEVVIDENTRKSLFANFDGSPIGQVILIGKV 433
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
++ + + F N +Y+ Q F ++ I V V D + +
Sbjct: 434 PARIVGITQAQQGGFGSSQNLSLYLPYTAVQSRFLGSLSLRSITVQVSDDIDAAIAEQAV 493
Query: 245 VRILGNGVVVID 256
+L D
Sbjct: 494 TVLLTQRHGTRD 505
>gi|15602861|ref|NP_245933.1| hypothetical protein PM0996 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|81856738|sp|Q9CM47|MACB_PASMU RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|12721324|gb|AAK03080.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 649
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 23/241 (9%), Positives = 80/241 (33%), Gaps = 6/241 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++A +F+++ + ++ +G++IG+ A++ V+++ G + ++ + +
Sbjct: 260 AFLMAMHMMFAHKIR------TLLTMLGIIIGIAAVVCVIALGEGAKNKVLAEFSALGNN 313
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D I + D+ + + +S + N+
Sbjct: 314 TIDIYPGKNWGDPDAIKIQTLNQVDLALLRQQPYLKGATPQISVDLPLRFLNRTVNASVY 373
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ ++F + + + A ++ ++ + + +G
Sbjct: 374 GVSDAFFQLRKHRLLSGRWFNAHDMATHQAVSVIDKKSQQVIFGTESAVGKTVFIGQIPI 433
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ + + +++ ++ I V VK+ A + + I+ +
Sbjct: 434 LIVGVVETPPQNIEGQRATIWLPYNTVVSRLYNQSYFQQITVQVKEHIAPDLAEKAIIDL 493
Query: 248 L 248
L
Sbjct: 494 L 494
>gi|86153410|ref|ZP_01071614.1| macrolide-specific ABC-type efflux carrier [Campylobacter jejuni
subsp. jejuni HB93-13]
gi|121613435|ref|YP_001000309.1| macrolide-specific efflux protein macB [Campylobacter jejuni subsp.
jejuni 81-176]
gi|167005258|ref|ZP_02271016.1| macrolide-specific efflux protein macB [Campylobacter jejuni subsp.
jejuni 81-176]
gi|134048479|sp|A1VYW8|MACB_CAMJJ RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|85843136|gb|EAQ60347.1| macrolide-specific ABC-type efflux carrier [Campylobacter jejuni
subsp. jejuni HB93-13]
gi|87250069|gb|EAQ73027.1| macrolide-specific efflux protein macB [Campylobacter jejuni subsp.
jejuni 81-176]
Length = 641
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 29/243 (11%), Positives = 75/243 (30%), Gaps = 9/243 (3%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A+ + +++ S ++ +G++IG+ +++ V+++ G + +++ + + +
Sbjct: 250 FKIAYSSILAHKLR------SILTMLGIIIGIASVVCVVALGLGSQAKVLESIARLGTNT 303
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + D + RL+F +SG + +S
Sbjct: 304 IEIRPGRGFGDLRSGKTRLNFSDLETLRSLEYLEAVDAHSNTSGVATYTNISLSARAEGV 363
Query: 129 LQNSFSR---FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
N+F+ + + +
Sbjct: 364 GVNNFAIEGLRIDAGRILNNDDVKNSTNVAVLDFNAKKNLFPDEKSENILGRVVLFNSQP 423
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
K VL + + + +Y+ + + I V VKD + I+
Sbjct: 424 FKIIGVLQKDTDKPIEDNVVRLYIPYTTLMNKLTGDRNLREIIVKVKDDVSSTLAENAII 483
Query: 246 RIL 248
RIL
Sbjct: 484 RIL 486
>gi|86151678|ref|ZP_01069892.1| macrolide-specific efflux protein macB [Campylobacter jejuni subsp.
jejuni 260.94]
gi|85841307|gb|EAQ58555.1| macrolide-specific efflux protein macB [Campylobacter jejuni subsp.
jejuni 260.94]
Length = 641
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 29/243 (11%), Positives = 75/243 (30%), Gaps = 9/243 (3%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A+ + +++ S ++ +G++IG+ +++ V+++ G + +++ + + +
Sbjct: 250 FKIAYSSILAHKLR------SILTMLGIIIGIASVVCVVALGLGSQAKVLESIARLGTNT 303
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + D + RL+F +SG + +S
Sbjct: 304 IEIRPGRGFGDLRSGKTRLNFSDLETLRSLEYLEAVDAHSNTSGVATYTNISLSARAEGV 363
Query: 129 LQNSFSR---FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
N+F+ + + +
Sbjct: 364 GVNNFAIEGLRIDAGRILNNDDVKNSTNVAVLDFNAKKNLFPDEKSENILGRVVLFNSQP 423
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
K VL + + + +Y+ + + I V VKD + I+
Sbjct: 424 FKIIGVLQKDTDKPIEDNVVRLYIPYTTLMNKLTGDRNLREIIVKVKDDVSSTLAENAII 483
Query: 246 RIL 248
RIL
Sbjct: 484 RIL 486
>gi|209525219|ref|ZP_03273762.1| protein of unknown function DUF214 [Arthrospira maxima CS-328]
gi|209494404|gb|EDZ94716.1| protein of unknown function DUF214 [Arthrospira maxima CS-328]
Length = 396
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 24/245 (9%), Positives = 65/245 (26%), Gaps = 9/245 (3%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S +S +GV +GV + M V N + +++ ++ D
Sbjct: 23 STLSAVGVFMGVAVVTATMQVRNISEAVIEQQMNERESPILYLWISDHQSGKVQSFTMDD 82
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
+ R + + + G
Sbjct: 83 VEFLNNNLQGITKVITLRFVWWIDSVQFHDRTGHPDMTIAVTPEYQQVSGRRIIKGRFFN 142
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ + L+ + + + + + R + + + FP +
Sbjct: 143 STDVEQYLSVAIVDDVLANHLFDNMDPINQRVYIENRPYTIVGVIESKDIFPSMQRQGLL 202
Query: 209 MSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL---------GNGVVVIDWQQ 259
M + + + + ++D D +++ + IL G+ V + D +
Sbjct: 203 MIPLSLDMAITGNLQLDELMIGIQDLDNVDQIKTQAISILQKRIPTQQYGDWVNITDILE 262
Query: 260 RYQIF 264
+ +
Sbjct: 263 QRETL 267
>gi|192360827|ref|YP_001980551.1| putative ABC transporter permease [Cellvibrio japonicus Ueda107]
gi|190686992|gb|ACE84670.1| putative ABC transporter, permease protein [Cellvibrio japonicus
Ueda107]
Length = 410
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 31/231 (13%), Positives = 72/231 (31%), Gaps = 5/231 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQ--FIANR 86
+ ++ GV G++ L++++ GF+ ++ ++ V YQ +
Sbjct: 18 TILTAFGVFWGILMLVLLLGAGRGFQNGVMAGFGNNVMDFIMVYPGTTAVAYQGLGVGRG 77
Query: 87 LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDR 146
+ D + + + V V + L F+ +
Sbjct: 78 IQLREDDVAAIQHQIPGIRSMSPAVNMGSVQVIHDRKTGEFELMGVADEFFMIKTAIDFN 137
Query: 147 GKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYD--- 203
V+ D I++ + D P+G I+ K + + D +
Sbjct: 138 HGRVMSSLDEKEIRKIALIGNTVAERLFNDDRPIGKTIQVKGVVLTVVGVFTDKDNNGRA 197
Query: 204 NGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVV 254
+ VY+ + Q F N + I + + + +V +L +
Sbjct: 198 SNRVYIPISTYQKVFGGGNQIGEIWLRPNAVTDGFELEKRVVELLKQRHQI 248
>gi|122064312|sp|Q2KVS6|MACB_BORA1 RecName: Full=Macrolide export ATP-binding/permease protein MacB
Length = 655
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 28/224 (12%), Positives = 71/224 (31%), Gaps = 5/224 (2%)
Query: 26 SIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIAN 85
+ + ++ +G++IG+ A++ V+++ G R+ ++ + + + V D + +
Sbjct: 275 RLRTCLTMLGIIIGIAAVVSVVALGAGSRQMILDDISAMGTNTVDVLPGKHFGDEKAASI 334
Query: 86 RLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFD 145
R DV + + +++ + N + + R G
Sbjct: 335 RTLVAADVEALARQPYADSVSPEVTTSATLRYRNVSVNGTVQGVGEQYPRVRGVRIAQGQ 394
Query: 146 RGKGVIIGKDLARNLGISIGDK--INILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYD 203
+ + + + K + + ++ V F + D
Sbjct: 395 FFDAAAVARRGQDVVIDNNTRKALFGNHTDPIGQVIFIGAVPARVIGVTRPQETLFGNAD 454
Query: 204 NGMVYMSLQEAQLYFNLENAVSGIEVFVKD---PDAIEKTHENI 244
V++ A + + I V V D P A E +
Sbjct: 455 ALHVWIPYTTALSRILGQQHLRSITVRVNDSTPPKAAEAAITKL 498
>gi|187479286|ref|YP_787311.1| macrolide-specific ABC-type efflux carrier [Bordetella avium 197N]
gi|115423873|emb|CAJ50424.1| putative macrolide-specific ABC-type efflux carrier [Bordetella
avium 197N]
Length = 655
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 28/224 (12%), Positives = 71/224 (31%), Gaps = 5/224 (2%)
Query: 26 SIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIAN 85
+ + ++ +G++IG+ A++ V+++ G R+ ++ + + + V D + +
Sbjct: 275 RLRTCLTMLGIIIGIAAVVSVVALGAGSRQMILDDISAMGTNTVDVLPGKHFGDEKAASI 334
Query: 86 RLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFD 145
R DV + + +++ + N + + R G
Sbjct: 335 RTLVAADVEALARQPYADSVSPEVTTSATLRYRNVSVNGTVQGVGEQYPRVRGVRIAQGQ 394
Query: 146 RGKGVIIGKDLARNLGISIGDK--INILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYD 203
+ + + + K + + ++ V F + D
Sbjct: 395 FFDAAAVARRGQDVVIDNNTRKALFGNHTDPIGQVIFIGAVPARVIGVTRPQETLFGNAD 454
Query: 204 NGMVYMSLQEAQLYFNLENAVSGIEVFVKD---PDAIEKTHENI 244
V++ A + + I V V D P A E +
Sbjct: 455 ALHVWIPYTTALSRILGQQHLRSITVRVNDSTPPKAAEAAITKL 498
>gi|159903387|ref|YP_001550731.1| putative ABC transporter [Prochlorococcus marinus str. MIT 9211]
gi|159888563|gb|ABX08777.1| possible ABC transporter [Prochlorococcus marinus str. MIT 9211]
Length = 409
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 31/255 (12%), Positives = 83/255 (32%), Gaps = 14/255 (5%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+I++ R L SN+ S ++ +G++IG ++I ++ V G + ++ + +V
Sbjct: 11 LIMSIRTLKSNKLR------SLLTMLGIVIGNASVITLVGVGKGAQNLASNQLSNLGANV 64
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS---GVLVRGISNSD 125
+ + +A + + + + S + S+S
Sbjct: 65 LFIVPGNNDTRRRGVAFPKNLVLKDAEAIKEQVPSVKRVAPQISSSEVVQYKSKSFSSSI 124
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
N +++N K + +G + + + +
Sbjct: 125 LGITPNFLQVRSFDIANGRFITKEDLKSARNVAVIGSDLNKDLFMRNQAIGKKLRIKDQS 184
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN-----AVSGIEVFVKDPDAIEKT 240
+ ++ F + + VY+ L + ++ ++S I + + +I K
Sbjct: 185 FEIIGIMEPKGAVFGNNQDKNVYIPLNTMVNRISGKDPTYGISLSFISIEALNEQSINKA 244
Query: 241 HENIVRILGNGVVVI 255
I +L +
Sbjct: 245 KFQITNLLRQRHKIT 259
>gi|325970635|ref|YP_004246826.1| hypothetical protein SpiBuddy_0805 [Spirochaeta sp. Buddy]
gi|324025873|gb|ADY12632.1| protein of unknown function DUF214 [Spirochaeta sp. Buddy]
Length = 393
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 28/247 (11%), Positives = 83/247 (33%), Gaps = 16/247 (6%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A+ + ++ + +S +G++IGV +++ ++++ + + + + +
Sbjct: 6 IKLAFSAMRGSKMR------TALSLLGIVIGVASVVAILTIGQSASQSITESIAVGGLDM 59
Query: 69 VIQQKYYPL-----VDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ Y +F + I + VLP + A V S + +S+
Sbjct: 60 ITVYPSYGQRTTGTFTEEFSDMLIRDIEGIQTVLPQNNSNAQVRYGQESMSASVAGVLSD 119
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + ++ +R + V++G +A L +S + + +
Sbjct: 120 YGTVLKLEYADGSFFSALDNINRRQVVVLGSTVAETLFPDQAAVGQYVSLFRNQAKSYLV 179
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ + V++ F+ + V + V D + +
Sbjct: 180 VGVLEAKDATFNLSY-----DNTVFIPYNTYGQRFSRTSGVGAYVIKVTDGYDTIEVSDR 234
Query: 244 IVRILGN 250
+ L +
Sbjct: 235 VTAYLDD 241
>gi|266621485|ref|ZP_06114420.1| ABC transporter, permease protein [Clostridium hathewayi DSM 13479]
gi|288866861|gb|EFC99159.1| ABC transporter, permease protein [Clostridium hathewayi DSM 13479]
Length = 402
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 23/253 (9%), Positives = 67/253 (26%), Gaps = 21/253 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ A + SN+ +F ++ +G++IG+ ++I ++SV + R
Sbjct: 6 MTM--------ALHAIRSNKMRSF------LTMLGIIIGIASVIAIVSVGDSMRSLYADA 51
Query: 61 VLGINGH-------VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGG 113
+ + + +R + A +
Sbjct: 52 YKNVGVNRAVVLVSWNVDDFRMSDYFTLDELDRAKEVFKDKIAYMDSDAYASTDAVYGRN 111
Query: 114 SGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSP 173
+ ++ +Q + ++ +G+ + + + +
Sbjct: 112 KVKYSFQGIDYNYPQVQPMNIIYGRELNEADVKGRRNNVVLEDKGAEMLFGTANCVGRTF 171
Query: 174 YGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKD 233
+ + + NG + + + +VKD
Sbjct: 172 RMTINKSTEEFTVVGVYRKDLSPLEAMMMGNGRTQSGFIPYTILTRPSDYFQDLNFYVKD 231
Query: 234 PDAIEKTHENIVR 246
++ I R
Sbjct: 232 GVDMKAFLPEIAR 244
>gi|219848580|ref|YP_002463013.1| hypothetical protein Cagg_1676 [Chloroflexus aggregans DSM 9485]
gi|219542839|gb|ACL24577.1| protein of unknown function DUF214 [Chloroflexus aggregans DSM
9485]
Length = 415
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 40/285 (14%), Positives = 94/285 (32%), Gaps = 29/285 (10%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M+IF + +A L +N+ + ++ +G++IGV A+I ++++ + +
Sbjct: 1 MNIFE--AIRIALNSLLANKLR------AILTMLGIIIGVGAVIALLALGGAIQTLVTSE 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ G+ ++V + DV + ++ A + + L
Sbjct: 53 LQGLGSNLVFLFPGTNDPENDRRVPPRLTNEDVAAIADPLNVPAVAAVCAEYSRRALTTY 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
S + + + + +G R+ +G ++ P+
Sbjct: 113 GGLSYNALIAGVSPTYPQVRNAQVAQGIFFDTRAVELRSREAVLGHRVAQRLFPNGEDPL 172
Query: 181 GMGIRSKSYTVLGMFRM-----RFPDYDNGMVYMSLQEAQLYFNLENA-------VSGIE 228
G IR + M F ++ +++ + AQ VS +
Sbjct: 173 GKRIRINGIGFQVIGVMAERGGSFASNEDDQIFVPITTAQERLFPPGQNTTRRVEVSVVY 232
Query: 229 VFVKDPDAIEKTHENIVRIL---------GNGVVVIDWQQRYQIF 264
+ +D ++IE + + +L N +I Q F
Sbjct: 233 LQARDENSIESLIDQVTAVLRQRNGLTYQDNNFTIITQQDLVSSF 277
>gi|325289144|ref|YP_004265325.1| protein of unknown function DUF214 [Syntrophobotulus glycolicus DSM
8271]
gi|324964545|gb|ADY55324.1| protein of unknown function DUF214 [Syntrophobotulus glycolicus DSM
8271]
Length = 384
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 41/100 (41%), Gaps = 8/100 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + +A + + SN ++ S ++ +G++IG+ ++IV++ + G + + +
Sbjct: 1 MKLMQTV--KLALKNILSN------TLRSSLTMLGLIIGISSVIVLVGIGTGSSQSITDQ 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFV 100
V + + A L + V + P+
Sbjct: 53 VSSLGTDTLTVSIEADNGLKPEDAENLSKLDGVAETAPYT 92
>gi|242280700|ref|YP_002992829.1| hypothetical protein Desal_3239 [Desulfovibrio salexigens DSM 2638]
gi|242123594|gb|ACS81290.1| protein of unknown function DUF214 [Desulfovibrio salexigens DSM
2638]
Length = 404
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 32/273 (11%), Positives = 81/273 (29%), Gaps = 23/273 (8%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + V++++R L N+ S ++ +G++IGV ++I V+ + G + +
Sbjct: 1 MFLQ-AVLLSFRTLLRNKLR------SCLTVLGIVIGVGSVIAVVVIGQGASRKLTNEIS 53
Query: 63 GINGHVVIQQKYYPLVDYQFIAN-RLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ +++ L + S V+
Sbjct: 54 SLGSRMIMIYPDEENGVGFAGETSNLVPFKNSDVEAIKREFPDCGGVAPVSESAVVAVFG 113
Query: 122 SNSDFSYLQNSFSRFYGNVSN-----DFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
+N+ + + + S ++ + F GK + + + P G
Sbjct: 114 NNNCQTAITGTESSYFSIRNWRVKSGRFFNTSEERAGKSVCIIGEKVSKNLFKGMDPIGS 173
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
+ + + +V + L+ Q + V I V
Sbjct: 174 FIRVDRFAYQVIGVLKSKGGSMAGKEQDDIVLVPLKVFQRRISGNKEVGMIIVGCGPGQD 233
Query: 237 IEKTHENIVRIL----------GNGVVVIDWQQ 259
+ +++ GN + D ++
Sbjct: 234 STALKRQLKQVMLERRPVPPGHGNNFAIEDMKE 266
>gi|153003370|ref|YP_001377695.1| hypothetical protein Anae109_0497 [Anaeromyxobacter sp. Fw109-5]
gi|152026943|gb|ABS24711.1| protein of unknown function DUF214 [Anaeromyxobacter sp. Fw109-5]
Length = 435
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 28/253 (11%), Positives = 79/253 (31%), Gaps = 14/253 (5%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIG-VMALIVVM-SVMNGFREDMIKRVLGING 66
+ +A R L + + F+G + V AL+V++ ++ G M++ L +
Sbjct: 6 LQIAGRNLARHTRRNL--------FLGGALAAVTALLVLLGALTAGMESSMMQSALTLMT 57
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
V ++ + + + V V +V+ G + + +S
Sbjct: 58 GDVNVGGFFKVTSGSAAPLVSQYPRVLETVRATVPEVEYVTMRGRGWAKAVSESVSMDLV 117
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ + G + + L +++ +
Sbjct: 118 LAGVDVANEPTFRSVLRVVDGDLEALAQPGTVLLFEGQAERLKVRVNDVVTLSAPTARGV 177
Query: 187 KSYTVLGMFRMRFPDYDNG--MVYMSLQEAQLYFNLENAVSG-IEVFVKDPDAIEKTHEN 243
+ + + + ++ + + + L A +G + ++++DP +
Sbjct: 178 NNTADVRVAAIARNVGLLSAFSAFIQVDTLRELYGLNAATTGALHLYLRDPGDAPRVAAR 237
Query: 244 IVRILGN-GVVVI 255
+ L + G V+
Sbjct: 238 LRTALADAGFRVM 250
>gi|72382134|ref|YP_291489.1| putative ABC transporter [Prochlorococcus marinus str. NATL2A]
gi|124025673|ref|YP_001014789.1| putative ABC transporter [Prochlorococcus marinus str. NATL1A]
gi|72001984|gb|AAZ57786.1| possible ABC transporter [Prochlorococcus marinus str. NATL2A]
gi|123960741|gb|ABM75524.1| possible ABC transporter [Prochlorococcus marinus str. NATL1A]
Length = 409
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 33/72 (45%), Gaps = 10/72 (13%)
Query: 3 IFSRFEVI----VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMI 58
+ + + +A + L SN+ S ++ +G++IG ++I ++ V G +
Sbjct: 1 MKRKLPLAETSGMAIKNLKSNK------FRSLLTMLGIVIGNASVITLVGVGRGAQNLAE 54
Query: 59 KRVLGINGHVVI 70
++ + +V+
Sbjct: 55 NQLSNLGANVLF 66
>gi|146320355|ref|YP_001200066.1| peptide ABC transporter permease [Streptococcus suis 98HAH33]
gi|223934184|ref|ZP_03626123.1| protein of unknown function DUF214 [Streptococcus suis 89/1591]
gi|253751352|ref|YP_003024493.1| putative permease [Streptococcus suis SC84]
gi|253753253|ref|YP_003026393.1| permease [Streptococcus suis P1/7]
gi|253755076|ref|YP_003028216.1| permease [Streptococcus suis BM407]
gi|145691161|gb|ABP91666.1| ABC-type antimicrobial peptide transport system, permease
component [Streptococcus suis 98HAH33]
gi|223897156|gb|EEF63578.1| protein of unknown function DUF214 [Streptococcus suis 89/1591]
gi|251815641|emb|CAZ51229.1| putative permease [Streptococcus suis SC84]
gi|251817540|emb|CAZ55286.1| putative permease [Streptococcus suis BM407]
gi|251819498|emb|CAR45053.1| putative permease [Streptococcus suis P1/7]
gi|292557927|gb|ADE30928.1| Protein of unknown function DUF214 [Streptococcus suis GZ1]
gi|319757638|gb|ADV69580.1| peptide ABC transporter permease [Streptococcus suis JS14]
Length = 415
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A + + +++ S ++ +G++IGV A+++++++ G + + K + G +V
Sbjct: 4 WKFALKSIMAHKMR------SLLTMLGIIIGVAAVVIIVAMGTGVAKSIEKSLAGDQNNV 57
Query: 69 VIQQ 72
+
Sbjct: 58 QVYF 61
>gi|219666558|ref|YP_002456993.1| hypothetical protein Dhaf_0490 [Desulfitobacterium hafniense
DCB-2]
gi|219536818|gb|ACL18557.1| protein of unknown function DUF214 [Desulfitobacterium hafniense
DCB-2]
Length = 443
Score = 41.3 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 10/74 (13%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ + R L + + ++ +GV+IG ++++++S+ G + + + +
Sbjct: 7 LKMCLRNLRRRKSR------TLLTVLGVLIGCCSIVIMVSIGIGTKVSQEEMLAEMGDLT 60
Query: 69 VIQQKYYPLVDYQF 82
+I + + Q
Sbjct: 61 IITVMVPNMGNDQN 74
>gi|261885148|ref|ZP_06009187.1| macrolide-specific ABC-type efflux carrier [Campylobacter fetus
subsp. venerealis str. Azul-94]
Length = 306
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 29/235 (12%), Positives = 78/235 (33%), Gaps = 10/235 (4%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
+ S++ +F ++ +G++IG+ ++I V+++ G ++ ++ + + + +
Sbjct: 74 IKSHKLRSF------LTMLGIIIGIASVICVVALAKGSQQKILSDINNMGTNTITIFPGK 127
Query: 76 PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSR 135
+ R+ + L S SG+L + S S
Sbjct: 128 GF--GDMHSGRVRSLSIDDSNLLGKLDFVDFSTPRMNTSGLLTYANQSFSGSLRSGSEYS 185
Query: 136 FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMF 195
+ +R+ I + D + + +T++G+
Sbjct: 186 LAISGLKIEKGRDFTKDDIINSRSNIIIDQFTKDAFFKDVDPIGKVILFNKQPFTIVGLV 245
Query: 196 RMRFPDYDNGM--VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ + VY F + + I + +KD + ++I+ +L
Sbjct: 246 KRDETSFSGDNLTVYAPYTTTMNKFTGDRDIRSIMLKLKDGVNAQVAEQSIIEVL 300
>gi|119490788|ref|ZP_01623120.1| hypothetical protein L8106_04079 [Lyngbya sp. PCC 8106]
gi|119453772|gb|EAW34930.1| hypothetical protein L8106_04079 [Lyngbya sp. PCC 8106]
Length = 397
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 29/249 (11%), Positives = 75/249 (30%), Gaps = 14/249 (5%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQK-- 73
L +N+ S ++ +G++IG ++I ++ + G + + +V + +V+
Sbjct: 6 LLANKMR------SSLTMLGIIIGNASVIGMIGIGEGAQSFVNDQVNSLGPNVLFIIPGS 59
Query: 74 -----YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + I + + V+ V+ S L + + + Y
Sbjct: 60 PEAQSRPVYPPQTLVLADAEAIAEQVPVVDEVAPSLNGSELITYRGKNASASLIGATPEY 119
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
L K L + + + + + + +
Sbjct: 120 LSVRSFDIARGRFMSDLDLKRNEQIVVLGSEIAEQLFGNEDPIGKQVRLKDTSLQVVGVM 179
Query: 189 YTVLGMFRMRFPDYDNGMV-YMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
F + M+ + V+ I V +K+P++++ I +
Sbjct: 180 QAKGSTFGTNQDMNVFIPITTMANRIVGETSPYGTQVTFISVSIKNPESMKAAQFQIENL 239
Query: 248 LGNGVVVID 256
L + D
Sbjct: 240 LRLRHKITD 248
>gi|225873606|ref|YP_002755065.1| efflux ABC transporter, macrolide exporter (MacB) family,
permease protein [Acidobacterium capsulatum ATCC 51196]
gi|225792847|gb|ACO32937.1| efflux ABC transporter, macrolide exporter (MacB) family,
permease protein [Acidobacterium capsulatum ATCC 51196]
Length = 417
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A+ L +N+ S ++ +G++IGV +I + S++NG ++ V +
Sbjct: 9 SIRMAFDTLRNNKLR------SGLTVLGIVIGVTTVIAISSIINGLNNNVSSLVSSFGTN 62
Query: 68 VVIQQKYYPLVDYQFIANRLDF 89
+ + + + L+
Sbjct: 63 LFWVYRMPLIQTSRPSPEMLNR 84
>gi|205355457|ref|ZP_03222228.1| ABC type transmembrane transport protein [Campylobacter jejuni
subsp. jejuni CG8421]
gi|205346691|gb|EDZ33323.1| ABC type transmembrane transport protein [Campylobacter jejuni
subsp. jejuni CG8421]
Length = 641
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 29/243 (11%), Positives = 75/243 (30%), Gaps = 9/243 (3%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A+ + +++ S ++ +G++IG+ +++ V+++ G + +++ + + +
Sbjct: 250 FKIAYSSILAHKLR------SILTMLGIIIGIASVVCVVALGLGSQAKVLESIARLGTNT 303
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + D + RL+F +SG + +S
Sbjct: 304 IEIRPGKGFGDLRSGKTRLNFSDLETLRSLEYLEAVDAHSNTSGVATYTNISLSARAEGV 363
Query: 129 LQNSFSR---FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
N+F+ + + +
Sbjct: 364 GVNNFAIEGLRIDAGRILNNDDVKNSTNVAVLDFNAKKNLFPDEKSENILGRVVLFNSQP 423
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
K VL + + + +Y+ + + I V VKD + I+
Sbjct: 424 FKIIGVLQKDTDKPIEDNVVRLYIPYTTLMNKLTGDRNLREIIVKVKDDVSSTLAENAII 483
Query: 246 RIL 248
RIL
Sbjct: 484 RIL 486
>gi|168699821|ref|ZP_02732098.1| probable ATP-binding/permease fusion ABC transporter [Gemmata
obscuriglobus UQM 2246]
Length = 426
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 25/43 (58%), Gaps = 6/43 (13%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVM 50
+ + R L ++R + ++ +G+++GV ++IV+++V
Sbjct: 9 PLKLGLRSLAAHRLR------TLLTTLGIVLGVASVIVMLAVG 45
>gi|86149848|ref|ZP_01068077.1| macrolide-specific efflux protein macB [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|85839666|gb|EAQ56926.1| macrolide-specific efflux protein macB [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|315058021|gb|ADT72350.1| Macrolide export ATP-binding/permease protein MacB [Campylobacter
jejuni subsp. jejuni S3]
Length = 641
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 29/243 (11%), Positives = 75/243 (30%), Gaps = 9/243 (3%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A+ + +++ S ++ +G++IG+ +++ V+++ G + +++ + + +
Sbjct: 250 FKIAYSSILAHKLR------SILTMLGIIIGIASVVCVVALGLGSQAKVLESIARLGTNT 303
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + D + RL+F +SG + +S
Sbjct: 304 IEIRPGKGFGDLRSGKTRLNFSDLETLRSLEYLEAVDAHSNTSGVATYTNISLSARAEGV 363
Query: 129 LQNSFSR---FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
N+F+ + + +
Sbjct: 364 GVNNFAIEGLRIDAGRILNNDDVKNSTNVAVLDFNAKKNLFPDEKSENILGRVVLFNSQP 423
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
K VL + + + +Y+ + + I V VKD + I+
Sbjct: 424 FKIIGVLQKDTDKPIEDNVVRLYIPYTTLMNKLTGDRNLREIIVKVKDDVSSTLAENAII 483
Query: 246 RIL 248
RIL
Sbjct: 484 RIL 486
>gi|330861250|emb|CBX71500.1| macrolide export ATP-binding/permease protein macB 2 [Yersinia
enterocolitica W22703]
Length = 604
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 21/238 (8%), Positives = 73/238 (30%), Gaps = 2/238 (0%)
Query: 26 SIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIAN 85
+ + ++ +G++IG+ +++ V+++ G ++ ++ + + + D + A
Sbjct: 225 RLRTLLTMLGIIIGIASVVSVVALGKGSQQQVLANINSMGTSTLEIFPGKDFGDMRSAAI 284
Query: 86 RLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFD 145
D + + +S+ + + + + + G
Sbjct: 285 HTLRATDADALAQQGYIHSVTPTVSTSTTLRYGNKSVSGTVNGVGEQYFLVRGYTLAQGM 344
Query: 146 RGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS--KSYTVLGMFRMRFPDYD 203
+ + + + + + + + V + F +
Sbjct: 345 AFNHTSVDNLMQEAVIDENTRDKLFPNGENPLGKVILLGSLPCRVIGVAAKKQSGFGSDE 404
Query: 204 NGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRY 261
N V++ A ++ + I V V D + + + ++L D+
Sbjct: 405 NLNVWIPYTTAMKRMLGQSYLKSITVRVNDDIDLANAEQGVTKLLTQRHGTQDFFVMN 462
>gi|320353756|ref|YP_004195095.1| ABC transporter-like protein [Desulfobulbus propionicus DSM 2032]
gi|320122258|gb|ADW17804.1| ABC transporter related protein [Desulfobulbus propionicus DSM
2032]
Length = 650
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 26/234 (11%), Positives = 77/234 (32%), Gaps = 3/234 (1%)
Query: 26 SIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIAN 85
+ + ++ +G++IG+ +++ V+++ G R+ ++K + + + + D +
Sbjct: 270 RLRTLLTMLGIIIGIASVVSVVALGEGSRQRILKDISAMGTNTISIYPGKDFGDMRSGRV 329
Query: 86 RLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFD 145
R D + ++ + + + + + + R G +
Sbjct: 330 RTLIPRDADALAQQPYVDTVTPVVTKSVTLIHRSVSVTAQVNGVGEHYFRVRGMELAEGQ 389
Query: 146 RGKGVII---GKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDY 202
+ +D+ + + + M + + V F D
Sbjct: 390 LFDRASVRASAQDVVIDQNTRRALFADTPNEVLGQVIMLGKVPCRVIGVTKKMDSNFGDT 449
Query: 203 DNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
D +++ A + + I V V D + +++V++L D
Sbjct: 450 DTLNLWVPYTTAMHRLTGQQYLRSITVRVADSVSSAVAEQSVVKLLTQRHGTKD 503
>gi|51891816|ref|YP_074507.1| ABC transporter permease protein [Symbiobacterium thermophilum IAM
14863]
gi|51855505|dbj|BAD39663.1| ABC transporter permease protein [Symbiobacterium thermophilum IAM
14863]
Length = 852
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 35/238 (14%), Positives = 73/238 (30%), Gaps = 24/238 (10%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+AWR L + + +++A + +GV + V L + G + + GI+ V
Sbjct: 7 LAWRSLRHSPRRVALTVAG--AALGVGLTVAVLCLASMARAGVEARIQEEFGGIDLVVGS 64
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
+ ++G V +G + L
Sbjct: 65 MDGRTWFGPEDLAE------------IEAIAGVRDVGVAYFPFAGDPFETDQAIRYVGLS 112
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
V + +A ++GIS G + + P + +++
Sbjct: 113 PHPGTLQLFKLPRPVGDDEVFVSDQMAADMGISAGQTVTLPFP----------DQPRTFR 162
Query: 191 VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
V + + Y SL+ Q A++ + + DP +T ++I L
Sbjct: 163 VGEIVSPPLRAGTPKLAYFSLRTMQDVAGQPGAITAFYIRLIDPRLKLQTADDIQEAL 220
>gi|238792044|ref|ZP_04635680.1| ABC transporter related [Yersinia intermedia ATCC 29909]
gi|238728675|gb|EEQ20193.1| ABC transporter related [Yersinia intermedia ATCC 29909]
Length = 660
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 27/246 (10%), Positives = 76/246 (30%), Gaps = 14/246 (5%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
+ ++ +G++IG+ +++ V+++ G ++ ++ + + + D + A
Sbjct: 284 TVLTMLGIIIGIASVVSVVALGKGSQQQVLANINAMGTSTLEIFPGKDFGDMRSAAIHTL 343
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
D + + +S+ + + + + + G N
Sbjct: 344 RATDADALAQQGYIHSVTPAVSTSTTLRYGNKSVSGTVNGVGEQYFLVRGYSINQGMAFN 403
Query: 149 GVIIGKDLAR---NLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNG 205
+ + + +P G V +G + F +N
Sbjct: 404 RTSVDGLMQEAVIDENTRDKLFAQGENPIGKVILLGSLPCRVIGIAAKK-QSGFGSDENL 462
Query: 206 MVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIF- 264
V++ A ++ + I V V D + + + ++L QR+
Sbjct: 463 NVWIPYTTAMKRMLGQSYLKSITVRVNDDIDLANAEQGVTKLL---------TQRHGTLD 513
Query: 265 FSCYES 270
F +
Sbjct: 514 FFVMNT 519
>gi|88596981|ref|ZP_01100217.1| macrolide-specific efflux protein macB [Campylobacter jejuni subsp.
jejuni 84-25]
gi|218562258|ref|YP_002344037.1| ABC transporter transmembrane protein [Campylobacter jejuni subsp.
jejuni NCTC 11168]
gi|122064319|sp|Q0PAR0|MACB_CAMJE RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|88190670|gb|EAQ94643.1| macrolide-specific efflux protein macB [Campylobacter jejuni subsp.
jejuni 84-25]
gi|112359964|emb|CAL34753.1| ABC-type transmembrane transport protein [Campylobacter jejuni
subsp. jejuni NCTC 11168]
gi|284925868|gb|ADC28220.1| ABC-type transmembrane transport protein [Campylobacter jejuni
subsp. jejuni IA3902]
gi|315927343|gb|EFV06687.1| macrolide export ATP-binding/permease protein macB [Campylobacter
jejuni subsp. jejuni DFVF1099]
Length = 641
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 29/243 (11%), Positives = 74/243 (30%), Gaps = 9/243 (3%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A+ + +++ S ++ +G++IG+ +++ V+++ G + +++ + + +
Sbjct: 250 FKIAYSSILAHKLR------SILTMLGIIIGIASVVCVVALGLGSQAKVLESIARLGTNT 303
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + D + RL+F +SG + +S
Sbjct: 304 IEIRPGKGFGDLRSGKTRLNFSDLETLRSLEYLEAVDAHSNTSGVATYTNISLSARAEGV 363
Query: 129 LQNSFSR---FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
N+F+ + + +
Sbjct: 364 GVNNFAIEGLRIDAGRILNNDDVKNSTNVAVLDFNAKKNLFPDEKSENILGRVVLFNSQP 423
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
K VL + + + Y+ + + I V VKD + I+
Sbjct: 424 FKIIGVLQKDTDKPIEDNVVRFYIPYTTLMNKLTGDRNLREIIVKVKDDVSSTLAENAII 483
Query: 246 RIL 248
RIL
Sbjct: 484 RIL 486
>gi|239909034|ref|YP_002955776.1| hypothetical protein DMR_43990 [Desulfovibrio magneticus RS-1]
gi|239798901|dbj|BAH77890.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 407
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 30/258 (11%), Positives = 73/258 (28%), Gaps = 14/258 (5%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
F + +A + L +++ + ++ +GV +G AL V+ V + +
Sbjct: 3 FSLRIALKSLATHKMR------TVLAMLGVFLGAFALTGVLHVTLAMERKAVIETEKLGP 56
Query: 67 HVVIQQKYYPLVD----YQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
++++ N +PD + +L + S +
Sbjct: 57 NLLMAMTGNIRFRRGDIRPDAGNTNLKLPDAVALLRGLPSAVDGVPFLSFPMPIRAGDKK 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ F R + + + +
Sbjct: 117 VMCQLVATWPAYPSIRGATPQFGRFFDQAEEDERELVCALGPAIARRLFGTPEAAVGQSV 176
Query: 183 GIRSKSYTVLGMFRMRFPD----YDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
I TV+G+ + D + +++ L + + + G+ V + D +
Sbjct: 177 FIFRARLTVVGVMEEKGSDVSGANQDEQIFVPLSTFMRRMSNKTYIHGVYVRLADGADFD 236
Query: 239 KTHENIVRILGNGVVVID 256
+ E V IL +
Sbjct: 237 ASREAAVHILRKRHDIKT 254
>gi|332162531|ref|YP_004299108.1| putative ABC transporter, ATP-binding protein [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|325666761|gb|ADZ43405.1| putative ABC transporter, ATP-binding protein [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
Length = 660
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 21/238 (8%), Positives = 73/238 (30%), Gaps = 2/238 (0%)
Query: 26 SIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIAN 85
+ + ++ +G++IG+ +++ V+++ G ++ ++ + + + D + A
Sbjct: 281 RLRTLLTMLGIIIGIASVVSVVALGKGSQQQVLANINSMGTSTLEIFPGKDFGDMRSAAI 340
Query: 86 RLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFD 145
D + + +S+ + + + + + G
Sbjct: 341 HTLRATDADALAQQGYIHSVTPTVSTSTTLRYGNKSVSGTVNGVGEQYFLVRGYTLAQGM 400
Query: 146 RGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS--KSYTVLGMFRMRFPDYD 203
+ + + + + + + + V + F +
Sbjct: 401 AFNHTSVDNLMQEAVIDENTRDKLFPNGENPLGKVILLGSLPCRVIGVAAKKQSGFGSDE 460
Query: 204 NGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRY 261
N V++ A ++ + I V V D + + + ++L D+
Sbjct: 461 NLNVWIPYTTAMKRMLGQSYLKSITVRVNDDIDLANAEQGVTKLLTQRHGTQDFFVMN 518
>gi|300770425|ref|ZP_07080304.1| ABC superfamily ATP binding cassette transporter permease
[Sphingobacterium spiritivorum ATCC 33861]
gi|300762901|gb|EFK59718.1| ABC superfamily ATP binding cassette transporter permease
[Sphingobacterium spiritivorum ATCC 33861]
Length = 799
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 29/244 (11%), Positives = 64/244 (26%), Gaps = 2/244 (0%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+AWR L N+ +F+SI S I + I+ + F + + V G+
Sbjct: 6 FKLAWRNLLKNKTTSFVSIVSLALGICCFFLLGTYIINELRFDSFHKKADRIVFMSFGYK 65
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + + A F +V V S + + +
Sbjct: 66 APSEDEFTETPWTPNAAVPAFAEQFPEVEKGVRLFKRGSEEHKVPVQYKGKVFNEDGLVF 125
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
F + + + + + + +T + +
Sbjct: 126 ADEPFFDVFSFDFIKGNPALALKEPNSIVITESTAKRYFGEEEALGESLTMNNIPWKVTG 185
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ G + + + + N +S + +K P+ I I L
Sbjct: 186 VIKDIPSYSQIQFNIIGPYHSLSRFKNVSWGAANDISYL--LLKSPNDIAAVQSKIDNYL 243
Query: 249 GNGV 252
Sbjct: 244 KEQF 247
>gi|219849316|ref|YP_002463749.1| hypothetical protein Cagg_2440 [Chloroflexus aggregans DSM 9485]
gi|219543575|gb|ACL25313.1| protein of unknown function DUF214 [Chloroflexus aggregans DSM
9485]
Length = 416
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+FS + +A+ L +N+ S ++ +GV+IG L+ V+S+ N + + ++
Sbjct: 1 MFSEL-IAMAFDSLRANK------FRSLLTMLGVIIGAGTLVAVLSLGNALQGQVFEQF 52
>gi|281356418|ref|ZP_06242910.1| protein of unknown function DUF214 [Victivallis vadensis ATCC
BAA-548]
gi|281317110|gb|EFB01132.1| protein of unknown function DUF214 [Victivallis vadensis ATCC
BAA-548]
Length = 452
Score = 41.3 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++FS VA++ L N + ++ +G++IG+ A+I +M + NG + +
Sbjct: 1 MTVFSTI--HVAFKALLRNPTR------ALLTTLGIVIGIAAVITMMEIGNGSSQSIKSS 52
Query: 61 VLGINGHVV 69
+ + + +
Sbjct: 53 IEKMGANTI 61
>gi|332182287|gb|AEE17975.1| protein of unknown function DUF214 [Treponema brennaborense DSM
12168]
Length = 425
Score = 41.3 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 33/276 (11%), Positives = 85/276 (30%), Gaps = 20/276 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVM--ALIVVM---SVMNGFREDMIKRVLG 63
+ +AW+ +F ++ ++ ++ GV+ V+ ALI + S +N + L
Sbjct: 3 LKMAWKNIFRYKRRTLVTASAIA--FGVLFTVLFDALIFGISNESEINILEYETPGAKLL 60
Query: 64 INGHVVIQQKYYPLVDYQFIANRLD-------FIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
+G+ +K + + +P ++ + GS
Sbjct: 61 ADGYFEEIKKLPMDYLIEENDSSKIISYLESKKLPYTKEIQTECEIYFNEDYFETSGSMA 120
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
+ + + + S + + G + +
Sbjct: 121 GIVSALDCEKAKDVFSLHESIESGTWLKKEADGSACTGAVVGSWMADDMKAQPGYFITVQ 180
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
G ++ ++G+ ++ ++M + +E AV+ I+V +
Sbjct: 181 CKGRGGFSQTIDVPIIGIIHCPNMAINSSYIFMDIDYIDEMLAMEKAVTAIDVGLGGGGL 240
Query: 237 IE----KTHENIVR--ILGNGVVVIDWQQRYQIFFS 266
+ + I + +L NG + W+ S
Sbjct: 241 ADRNFKRFSAEIKKTDLLHNGPELKSWRDIQADILS 276
>gi|310778187|ref|YP_003966520.1| protein of unknown function DUF214 [Ilyobacter polytropus DSM
2926]
gi|309747510|gb|ADO82172.1| protein of unknown function DUF214 [Ilyobacter polytropus DSM
2926]
Length = 362
Score = 41.3 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+AW+ ++ N+K S S GV++G+ ++IV+ S+ G ++ + + + +
Sbjct: 2 SFWMAWKMIWENKKR------SLFSLCGVLMGISSIIVIFSLAEGGKDLIKSDLSSLAEN 55
Query: 68 VVI 70
V+
Sbjct: 56 RVM 58
>gi|291614535|ref|YP_003524692.1| hypothetical protein Slit_2077 [Sideroxydans lithotrophicus ES-1]
gi|291584647|gb|ADE12305.1| protein of unknown function DUF214 [Sideroxydans lithotrophicus
ES-1]
Length = 399
Score = 41.3 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 36/257 (14%), Positives = 85/257 (33%), Gaps = 17/257 (6%)
Query: 13 WRYLFSNRKNAFIS--IASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
R L + ++F++ + SF++ +G+ IG+ A+I++ S+ G + M+ +++
Sbjct: 3 LRDLITLTSSSFLTYRMRSFLTGLGIAIGIAAVILLTSIGEGLHQFMLSEFSQFGTNIIS 62
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
Q + P ++ + +V + G +
Sbjct: 63 VQPGKTQTQGGNVGIFGSVRPLTLEDADALRRLPYVEHIVPSLVGNAEVKFQGRTRRTMV 122
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLAR-----NLGISIGDKINILSPYGDVTPMGMGIR 185
R +G+ + + D + +G I ++ + G R
Sbjct: 123 LGEGRDFGHAFTMKVQSGSFWVDADNEQARALAVIGAKIEQELFAGTNPLGQYLRIGGQR 182
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ V+ + V++ A FN +EV V + ++
Sbjct: 183 YRVVGVMESKGQILGMDMDDTVFIPAARAMELFNRPGL---MEVNVS--YRADVDANTVI 237
Query: 246 RILGNGVVVIDWQQRYQ 262
RIL + ++R+
Sbjct: 238 RILTERL-----KERHG 249
>gi|20095091|ref|NP_614938.1| ABC transporter permease [Methanopyrus kandleri AV19]
gi|19888379|gb|AAM02868.1| Permease subunit of a ABC-type transport system involved in
lipoprotein release [Methanopyrus kandleri AV19]
Length = 370
Score = 41.3 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMI 58
+ VA R + S+ S ++ +GV IGV A++ + ++ G + D+
Sbjct: 4 IKVAIRNIARR------SVRSLLTILGVAIGVAAVVGISAIAKGLQHDVK 47
>gi|312621448|ref|YP_004023061.1| hypothetical protein Calkro_0338 [Caldicellulosiruptor
kronotskyensis 2002]
gi|312201915|gb|ADQ45242.1| protein of unknown function DUF214 [Caldicellulosiruptor
kronotskyensis 2002]
Length = 392
Score = 41.3 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 33/252 (13%), Positives = 82/252 (32%), Gaps = 19/252 (7%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M+ F+ +A + + SN+ +F ++ +GV+IG+ A+I V+ + G + + R
Sbjct: 1 MAQFA-LAFKMAIKSILSNKLRSF------LTMLGVIIGIWAVIAVVGLAQGSTKSITDR 53
Query: 61 VLGINGHVVIQQ----KYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
+ + +++ V Y+ + + D I+ + + +
Sbjct: 54 LQRLGTNLIQINITGRNSNRNVTYEELQQFAEQHQDDIEAIAPTVSSSVTLKYGTNTHDT 113
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
+ G + + + S + D D + V + + + I
Sbjct: 114 TLVGTTADYSTVRDVNVSSGRFILPIDVDYRQKVALVGTYIVKDLFNGQNPIGKKIKING 173
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
+G+ + D+ V + + AQ + + + D +
Sbjct: 174 QIFTVVGVLEERANS-------QEQSDDDQVIVPVTVAQRLTR-NAIIRNFAIKITDGNR 225
Query: 237 IEKTHENIVRIL 248
E + L
Sbjct: 226 SEAVMNYLNDFL 237
>gi|89893282|ref|YP_516769.1| hypothetical protein DSY0536 [Desulfitobacterium hafniense Y51]
gi|89332730|dbj|BAE82325.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 443
Score = 41.3 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 10/74 (13%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ + R L + + ++ +GV+IG ++++++S+ G + + + +
Sbjct: 7 LKMCLRNLRRRKSR------TLLTVLGVLIGCCSIVIMVSIGIGTKVSQEEMLAEMGDLT 60
Query: 69 VIQQKYYPLVDYQF 82
+I + + Q
Sbjct: 61 IITVMVPNMGNDQN 74
>gi|149369685|ref|ZP_01889537.1| ABC transporter, permease protein, putative [unidentified
eubacterium SCB49]
gi|149357112|gb|EDM45667.1| ABC transporter, permease protein, putative [unidentified
eubacterium SCB49]
Length = 419
Score = 41.3 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 34/261 (13%), Positives = 78/261 (29%), Gaps = 18/261 (6%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F++ + L +NR F ++ GV G+ L+ +++++NG R + K
Sbjct: 1 MFNKDKWSEILEALNANRFRTF------LTAFGVAWGIFILVSLLALVNGLRTGVSKDFG 54
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ + + Y+ + F V + +S +G +
Sbjct: 55 DFATNSMFVWTQQTSMSYKGLPKGRGFNFRTEDVQVLKDNFPQLEYVSPRNQLGGYQGAN 114
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
N +F+ + + + G+ ++ + + I
Sbjct: 115 NVTRKEKTGAFTIYGDYPEYIKQQPMDITEGRFISYSDIEEKRKAVVIGQDVVTSLYDID 174
Query: 183 GIRSKSYTVLGMFRMR------------FPDYDNGMVYMSLQEAQLYFNLENAVSGIEVF 230
SY + + D +Y+ FN + V + +
Sbjct: 175 EEIIGSYIKINGVNFMVVGVFNATSSGGNSEEDANTIYLPFTTFSQVFNYGDIVGWMAIT 234
Query: 231 VKDPDAIEKTHENIVRILGNG 251
KD +I + I+ L
Sbjct: 235 AKDNTSITQIKPQILSKLKEQ 255
>gi|153952463|ref|YP_001398156.1| macrolide-specific efflux protein macB [Campylobacter jejuni subsp.
doylei 269.97]
gi|152939909|gb|ABS44650.1| macrolide-specific efflux protein macB [Campylobacter jejuni subsp.
doylei 269.97]
Length = 641
Score = 41.3 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 29/243 (11%), Positives = 75/243 (30%), Gaps = 9/243 (3%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A+ + +++ S ++ +G++IG+ +++ V+++ G + +++ + + +
Sbjct: 250 FKIAYSSILAHKLR------SVLTMLGIIIGIASVVCVVALGLGSQAKVLESITRLGTNT 303
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + D + RL+F +SG + +S
Sbjct: 304 IEIRPGRGFGDLRSGKTRLNFSDLETLRSLEYLEAVDAHSNTSGVATYTNISLSARAEGV 363
Query: 129 LQNSFSR---FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
N+F+ + + +
Sbjct: 364 GINNFAIEGLRIDAGRILNNDDVKNSTNVAVLDFNAKKNLFPDEKSENILGRVVLFNSQP 423
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
K VL + + + +Y+ + + I V VKD + I+
Sbjct: 424 FKIIGVLQKNTDKPIEDNVVRLYIPYTTLMNKLTGDRNLREIIVKVKDDVSSTLAENAII 483
Query: 246 RIL 248
RIL
Sbjct: 484 RIL 486
>gi|146299429|ref|YP_001194020.1| hypothetical protein Fjoh_1669 [Flavobacterium johnsoniae UW101]
gi|146153847|gb|ABQ04701.1| protein of unknown function DUF214 [Flavobacterium johnsoniae
UW101]
Length = 421
Score = 41.3 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 27/234 (11%), Positives = 71/234 (30%), Gaps = 12/234 (5%)
Query: 27 IASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANR 86
+ ++ GV G+ L+++++ NG + K GI + + Y+ +
Sbjct: 19 FRTILTAFGVFWGIFILVILLAAGNGLENGIKKGFDGIATNTMFMWSQTTSKAYKGLPKT 78
Query: 87 LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDR 146
+ V + + +S G +N ++F+ + +
Sbjct: 79 RRYDFRNSDVTALKAAIPDLLYVSPRNQLGDFNGTNNVVRGTKTSAFTIYGDYPELIKQQ 138
Query: 147 GKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMR-------- 198
+I G+ + + + I +Y +
Sbjct: 139 PMDIIKGRFVNQQDILEKRKVAVIGKGVISELYGKEEESVGTYIKINGINFMVVGVYKSK 198
Query: 199 ----FPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ + +++ Q FN + V + + +D +I + I+ I+
Sbjct: 199 QQGGNAEQEQKNIFIPFTTFQQAFNYGDKVGWMALTARDETSITELKPKILEII 252
>gi|256026701|ref|ZP_05440535.1| ABC transporter related protein [Fusobacterium sp. D11]
gi|289764697|ref|ZP_06524075.1| macrolide export ATP-binding/permease macB [Fusobacterium sp. D11]
gi|289716252|gb|EFD80264.1| macrolide export ATP-binding/permease macB [Fusobacterium sp. D11]
Length = 653
Score = 40.9 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 25/222 (11%), Positives = 70/222 (31%), Gaps = 2/222 (0%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IG+ +++ V+++ NG ++ +++ + + + + + +
Sbjct: 277 SLLTMLGIIIGIASIVCVVAIGNGSQQKVLENISSLGTNTMDIFNGEGMGSRFSNRIKSL 336
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSND--FDR 146
DV + + +S G+ V + + + + G D
Sbjct: 337 STTDVDILEKQSYVDSVTPNSTSSGTIVYQNKSFSGNLKGVGADYFDVRGVKITDGRAFS 396
Query: 147 GKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGM 206
+A + + K + + + +
Sbjct: 397 KDDEQNLSSVALIDENTQKSLFGGNENPIGKVILFNKKPLKIIGTVELSNVIGLNSSELN 456
Query: 207 VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
V+ + E + I V VKD + ++I +L
Sbjct: 457 VFAPYTMVMNKVSGEKYIGSITVKVKDDIDSQVAQKSITDLL 498
>gi|237745180|ref|ZP_04575661.1| macrolide export ATP-binding/permease macB [Fusobacterium sp. 7_1]
gi|229432409|gb|EEO42621.1| macrolide export ATP-binding/permease macB [Fusobacterium sp. 7_1]
Length = 653
Score = 40.9 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 25/225 (11%), Positives = 75/225 (33%), Gaps = 8/225 (3%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPL-----VDYQFI 83
S ++ +G++IG+ +++ V+++ NG ++ +++ + + + + + + +
Sbjct: 277 SLLTMLGIIIGIASIVCVVAIGNGSQQKVLENISSLGTNTMDIFNGEGMGSRFSNRIKSL 336
Query: 84 ANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSND 143
+ I + + V+ + SG + + Y + +
Sbjct: 337 STTDVDILEKQSYVDSVTPNSTSSGTIVYQNQSYSGNLKGVGADYFDVRGVKITDGRAFS 396
Query: 144 FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYD 203
D + + + N S+ + + K + + + +
Sbjct: 397 KDDEQNLSSVALIDENTQKSLFGENENPIGKVILFNKKPL---KIIGTVELSNVIGLNSS 453
Query: 204 NGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
V+ + E + I V VKD + ++I +L
Sbjct: 454 ELNVFAPYTMVMNKVSGEKYIGSITVKVKDDIDSQVAQKSITDLL 498
>gi|325982519|ref|YP_004294921.1| hypothetical protein NAL212_1921 [Nitrosomonas sp. AL212]
gi|325532038|gb|ADZ26759.1| protein of unknown function DUF214 [Nitrosomonas sp. AL212]
Length = 399
Score = 40.9 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M+ F+ A R L +++ + +S G+ IG+ A+I++ ++ +G + ++
Sbjct: 1 MNAIDTFQF--ALRSLLAHQLR------TVLSASGIAIGIAAVILLTAIGDGVQRFVLSE 52
Query: 61 VLGINGHVV 69
+++
Sbjct: 53 FTQFGTNII 61
>gi|238788075|ref|ZP_04631870.1| Macrolide export ATP-binding/permease protein macB [Yersinia
frederiksenii ATCC 33641]
gi|238723662|gb|EEQ15307.1| Macrolide export ATP-binding/permease protein macB [Yersinia
frederiksenii ATCC 33641]
Length = 669
Score = 40.9 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 21/235 (8%), Positives = 75/235 (31%), Gaps = 2/235 (0%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
+ ++ +G++IG+ +++ V+++ G ++ ++ + + + D + A
Sbjct: 293 TVLTMLGIIIGIASVVSVVALGKGSQQQVLANISAMGTSTLEIFPGKDFGDMRSAAIHTL 352
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
D + + +S+ + + + + + G +
Sbjct: 353 RAADADALAQQGYIHSTTPTVSTSTTLRYGNKSVSGTVNGVGEQYFLVRGYTIDQGMAFN 412
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS--KSYTVLGMFRMRFPDYDNGM 206
+ + + + + + + + + V+ + F +N
Sbjct: 413 RISVNNLMQEAVIDENTRDKLFPNGETPLGKVILLGSLPCRVIGVVARKQSGFGSDENLN 472
Query: 207 VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRY 261
V++ A ++ + I V V D + + + ++L D+
Sbjct: 473 VWIPYTAAMKRMLGQSYLKSITVRVNDDIDLANAEQGVTKLLTQRHGTQDFFVMN 527
>gi|284039500|ref|YP_003389430.1| hypothetical protein Slin_4653 [Spirosoma linguale DSM 74]
gi|283818793|gb|ADB40631.1| protein of unknown function DUF214 [Spirosoma linguale DSM 74]
Length = 413
Score = 40.9 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 38/106 (35%), Gaps = 8/106 (7%)
Query: 1 MSIFSRF--EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMI 58
M + AW+ L SN + +S +GV IG+ A+I V ++++ +
Sbjct: 1 MKFLRQTFESFRFAWQALRSNLLR------TMLSLLGVTIGIFAIIAVFTLVDSLEGSIR 54
Query: 59 KRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQA 104
+ I VV QK ++ + P+ +
Sbjct: 55 TSLSFIGDKVVYVQKMPWSFGGEYQWWKFFQRPEPKYSEYKFLSER 100
>gi|238785585|ref|ZP_04629565.1| Macrolide export ATP-binding/permease protein macB [Yersinia
bercovieri ATCC 43970]
gi|238713520|gb|EEQ05552.1| Macrolide export ATP-binding/permease protein macB [Yersinia
bercovieri ATCC 43970]
Length = 664
Score = 40.9 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 22/238 (9%), Positives = 72/238 (30%), Gaps = 2/238 (0%)
Query: 26 SIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIAN 85
+ + ++ +G++IG+ +++ V+++ G ++ ++ + + + D + A
Sbjct: 285 RLRTLLTMLGIIIGIASVVSVVALGKGSQQQVLANINAMGTSTLEIFPGKDFGDMRSAAI 344
Query: 86 RLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFD 145
+ D + + +SS + + + + + G
Sbjct: 345 QTLRATDADALAKQGYIHSVTPAVSSSSTLRYGNKSVSGTVNGVGEQYFMVRGYSIAQGM 404
Query: 146 RGKGVIIGKDLARNLGISIGDKINILS--PYGDVTPMGMGIRSKSYTVLGMFRMRFPDYD 203
+ + + + + + + V + F +
Sbjct: 405 AFTRASVDGLMQEAVIDENTRDKLFPNGESPLGKVILLGSLPCRVIGVAAKKQSGFGSDE 464
Query: 204 NGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRY 261
N V++ A + + I V V D + + + ++L D+
Sbjct: 465 NLNVWIPYTTAMKRMLGQTYLRSITVRVNDDIDLANAEQGVTKLLAQRHGAQDFFVMN 522
>gi|256422386|ref|YP_003123039.1| hypothetical protein Cpin_3371 [Chitinophaga pinensis DSM 2588]
gi|256037294|gb|ACU60838.1| protein of unknown function DUF214 [Chitinophaga pinensis DSM
2588]
Length = 417
Score = 40.9 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 33/88 (37%), Gaps = 6/88 (6%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A L N+ F +S +G+ IG+ +I V++ N ++ V +
Sbjct: 11 SLKMAVLELRVNKLRTF------LSLLGITIGIFCIIAVLTATNSLERNVRNEVETLGSD 64
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIK 95
VV QK+ F + P
Sbjct: 65 VVYVQKWPWDGGPDFPWWKYVNRPLPKF 92
>gi|325978519|ref|YP_004288235.1| ABC transporter permease [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|325178447|emb|CBZ48491.1| ABC transporter, permease protein, putative [Streptococcus
gallolyticus subsp. gallolyticus ATCC BAA-2069]
Length = 410
Score = 40.9 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A + ++ +F ++ +G++IGV +++V+M++ G + + +
Sbjct: 4 WKFALSSIMGHKMRSF------LTMLGIIIGVASVVVIMALGQGMTKQITDMFSADTRDI 57
Query: 69 VIQQ 72
I
Sbjct: 58 EIYY 61
>gi|306831615|ref|ZP_07464773.1| ABC superfamily ATP binding cassette transporter, membrane
protein [Streptococcus gallolyticus subsp. gallolyticus
TX20005]
gi|304426400|gb|EFM29514.1| ABC superfamily ATP binding cassette transporter, membrane
protein [Streptococcus gallolyticus subsp. gallolyticus
TX20005]
Length = 410
Score = 40.9 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A + ++ +F ++ +G++IGV +++V+M++ G + + +
Sbjct: 4 WKFALSSIMGHKMRSF------LTMLGIIIGVASVVVIMALGQGMTKQITDMFSADTRDI 57
Query: 69 VIQQ 72
I
Sbjct: 58 EIYY 61
>gi|146279868|ref|YP_001170026.1| TRAP-type C4-dicarboxylate transport system periplasmic
component-like protein [Rhodobacter sphaeroides ATCC
17025]
gi|145558109|gb|ABP72721.1| TRAP-type C4-dicarboxylate transport system periplasmic
component-like protein [Rhodobacter sphaeroides ATCC
17025]
Length = 401
Score = 40.9 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 36/248 (14%), Positives = 82/248 (33%), Gaps = 12/248 (4%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A + N+ +F ++ +GV+IGV A+I +++V G + V + +V+
Sbjct: 10 FIA---IVRNKLRSF------LTVLGVVIGVAAVIAMVTVGQGSSAQVSANVASLGTNVL 60
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
I + ++ F ++ L + V+ +S G V+ + +
Sbjct: 61 IVRPGKRMMGPGTRDTSPAFTLRDVEALQELPVIRSVAPNTSSGQTVIYGNANATTSITG 120
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKD---LARNLGISIGDKINILSPYGDVTPMGMGIRS 186
S N D R + + + P G +
Sbjct: 121 TTSDYLTVANWVLDSGRAFTMAEERQGAAVCVLGDTVRQKLFGAADPLGRTVRIRSISCE 180
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ F + +V M ++ Q + VSG+ + +++ + + I
Sbjct: 181 VVGLLQAKGAGSFGQDQDDLVLMPIRTVQRRLAGDQDVSGMSIALQEGVSATRGIREISA 240
Query: 247 ILGNGVVV 254
+L +
Sbjct: 241 LLRERRRI 248
>gi|302872671|ref|YP_003841307.1| hypothetical protein COB47_2062 [Caldicellulosiruptor obsidiansis
OB47]
gi|302575530|gb|ADL43321.1| protein of unknown function DUF214 [Caldicellulosiruptor
obsidiansis OB47]
Length = 392
Score = 40.9 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 32/252 (12%), Positives = 82/252 (32%), Gaps = 19/252 (7%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M+ F+ +A + + SN+ +F ++ +GV+IG+ A+I V+ + G + + R
Sbjct: 1 MAQFA-LAFKMAIKSILSNKLRSF------LTMLGVIIGIWAVIAVVGLAQGSTKSITDR 53
Query: 61 VLGINGHVVIQQ----KYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
+ + +++ V Y+ + + + I+ + + +
Sbjct: 54 LQRLGTNLIQINITGRNSNRNVTYEELQQFAEQHAEDIEAIAPTVSSSVTLKYGTNTHDT 113
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
+ G + + + S + D D + V + + + I
Sbjct: 114 TLIGTTADYSTVRDVNVSSGRFILPIDVDYRQKVALVGTYIVKDLFNGQNPIGKKIKING 173
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
+G+ + D+ V + + AQ + + + D +
Sbjct: 174 QIFTVVGVLEERANS-------QQQSDDDQVIVPVTVAQRLTR-NAIIRNFAIKITDGNR 225
Query: 237 IEKTHENIVRIL 248
E + L
Sbjct: 226 SEAVMNYLNDFL 237
>gi|253687768|ref|YP_003016958.1| ABC transporter related [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251754346|gb|ACT12422.1| ABC transporter related [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 643
Score = 40.9 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 27/252 (10%), Positives = 70/252 (27%), Gaps = 7/252 (2%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AWR L F + S ++ +G+ IG+ +++V++ + G R++M K + + ++
Sbjct: 261 AWRTLL------FSPLRSALTLLGIAIGIASILVMLGIGEGARQEMSKTLSRLGSTLMTV 314
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
D I + + LP + + + S + +
Sbjct: 315 IPQSIDADVAAGRITDADIEALKR-LPDIDAVVPMLTGQATVRQGAFNLKSAVIATTAEA 373
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTV 191
+G + F + + G + + +
Sbjct: 374 MVVNNWGLGAGAFIMPLHEYANMSVTVLGAEVAQRSFPSGNAVGSDILLNNIPFTVVGVL 433
Query: 192 LGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNG 251
+ V + L + + V + + + + +L
Sbjct: 434 APQGGADMNGNLDQAVIVPFGTGSLRVIGRQNIDSVTVKARSLQTVRRVESEVNDLLSAR 493
Query: 252 VVVIDWQQRYQI 263
D+ +
Sbjct: 494 HQRSDFTIINRA 505
>gi|71279549|ref|YP_271679.1| putative ABC transporter permease [Colwellia psychrerythraea 34H]
gi|71145289|gb|AAZ25762.1| putative ABC transporter, permease protein [Colwellia
psychrerythraea 34H]
Length = 441
Score = 40.9 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 33/262 (12%), Positives = 87/262 (33%), Gaps = 11/262 (4%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A R +F N + + ++ + + + A++ + + G E M+K
Sbjct: 42 LAKRSIFRNTRR------TLLTVLLISCSLAAILFTDAFVRGMVETMVKISTQTFLGEGQ 95
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
+ D ++ + QAF + +G ++++ +
Sbjct: 96 IHRVGFREANDIDLYIEDTTTLYQQLNATTAIQAFAPRVLTGAMTSSSENVASAIVYGVD 155
Query: 131 NSFSRFYGNVSNDFDRGKGVI-IGKDLARNLGISIGDKINILSP--YGDVTPMGMGIRSK 187
+ +G+ + I ++ ++ +I++ G +
Sbjct: 156 AIQEAQVSKLKLAVTQGEYLSGIDGEIIIGEQLADLLEISLGDRVVITVSEANGGDLSQA 215
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ V G+F D GM +++L + Q N+ V + + ++ E + +
Sbjct: 216 LFRVSGLFSFNERSMDIGMAFINLSQGQKLLNIAG-VHEVALRLQHLHQAEDSTLPFWKT 274
Query: 248 LGNG-VVVIDWQQRYQIFFSCY 268
L N + + W++ S
Sbjct: 275 LNNDQIETLSWKELVPQLSSML 296
>gi|312878289|ref|ZP_07738209.1| protein of unknown function DUF214 [Caldicellulosiruptor
lactoaceticus 6A]
gi|311794938|gb|EFR11347.1| protein of unknown function DUF214 [Caldicellulosiruptor
lactoaceticus 6A]
Length = 392
Score = 40.9 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 33/254 (12%), Positives = 79/254 (31%), Gaps = 23/254 (9%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M+ F+ +A + + SN+ +F ++ +GV+IG+ A+I V+ + G + + R
Sbjct: 1 MAQFA-LAFKMAIKSILSNKLRSF------LTMLGVIIGIWAVIAVVGLAQGSTKSITDR 53
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRL------DFIPDVIKVLPFVSGQAFVSGLSSGGS 114
+ + +++ + L S G ++ +
Sbjct: 54 LQRLGTNLIQINITERNSNRNVTYEELQQFAEQHQDDIEAIAPTVSSSVTLKYGTNTHDT 113
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
++ S + S RF + D+ + ++ + I
Sbjct: 114 TLIGTTADYSLVRDVNVSSGRFILPIDVDYCQKVALVGTYIVKDLFNGQNPIGKKIKING 173
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
T +G+ + D+ V + + AQ + + + D
Sbjct: 174 QIFTVVGVLEERANSQE---------QSDDDQVIVPVTVAQRLTR-NAIIRNFAIKITDG 223
Query: 235 DAIEKTHENIVRIL 248
+ E + L
Sbjct: 224 NRSEAVMNYLNDFL 237
>gi|297159982|gb|ADI09694.1| ABC transporter related protein [Streptomyces bingchenggensis
BCW-1]
Length = 403
Score = 40.9 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 28/224 (12%), Positives = 71/224 (31%), Gaps = 7/224 (3%)
Query: 30 FISFIGVMIGVMALIVVMSV-MNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
+S +G+ IGV A++ V+ + M+G R ++ +R+ + +++ + +
Sbjct: 37 LLSALGIAIGVAAMLAVVGISMSG-RAEVDRRLDRLGTNLLRVSPSQAMGQSSQLPEEST 95
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
+ I + V+ V + + G + S + R
Sbjct: 96 AMIRRIGPVLQVAATGAVKDAKVYRNEHMPSGRTGSIEVLAADPRLLASVGGKVRTGRWL 155
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ LG ++++ +P + G V + + +
Sbjct: 156 DSATAEYPGVVLGRQAARRLDVHTPGTRLWLGGT----WFSLVGIVDPVPLAPEIDQAAL 211
Query: 209 MSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGV 252
+ AQ Y + S + V ++ D + + +
Sbjct: 212 VGWPAAQRYLGFDGHPSTVYVRTEE-DRVTAVRDVLAATANPEH 254
>gi|57238197|ref|YP_178722.1| macrolide-specific efflux protein macB [Campylobacter jejuni
RM1221]
gi|81819547|sp|Q5HVG3|MACB_CAMJR RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|57167001|gb|AAW35780.1| macrolide-specific efflux protein macB [Campylobacter jejuni
RM1221]
Length = 641
Score = 40.9 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 29/243 (11%), Positives = 75/243 (30%), Gaps = 9/243 (3%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A+ + +++ S ++ +G++IG+ +++ V+++ G + +++ + + +
Sbjct: 250 FKIAYSSILAHKLR------SILTMLGIIIGIASVVCVVALGLGSQAKVLESIARLGTNT 303
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + D + RL+F +SG + +S
Sbjct: 304 IEIRPGKGFGDLRSGKTRLNFSDLETLRSLEYLEAVDAHSNTSGVATYTNISLSARAEGV 363
Query: 129 LQNSFSR---FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
N+F+ + + +
Sbjct: 364 GVNNFAIEGLRIDAGRILNNDDVKNSTNVAVLDFNAKKNLFPDEKSENILGRVVLFNSQS 423
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
K VL + + + +Y+ + + I V VKD + I+
Sbjct: 424 FKIIGVLQKDTDKPIEDNVVRLYIPYTTLMNKLTGDRNLREIIVKVKDDVSSTLAENAII 483
Query: 246 RIL 248
RIL
Sbjct: 484 RIL 486
>gi|32473364|ref|NP_866358.1| hypothetical protein RB4864 [Rhodopirellula baltica SH 1]
gi|32398044|emb|CAD78139.1| conserved hypothetical protein [Rhodopirellula baltica SH 1]
gi|327539723|gb|EGF26329.1| ABC-type antimicrobial peptide transport system, permease
component [Rhodopirellula baltica WH47]
Length = 455
Score = 40.9 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 24/41 (58%), Gaps = 6/41 (14%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSV 49
+ +AWR +++SF++ + + +GV +++VMSV
Sbjct: 4 LFIAWRNFRYR------ALSSFLTTLSLTLGVGLVVLVMSV 38
>gi|311746453|ref|ZP_07720238.1| efflux ABC transporter, permease protein [Algoriphagus sp. PR1]
gi|311302519|gb|EFQ79225.1| efflux ABC transporter, permease protein [Algoriphagus sp. PR1]
Length = 815
Score = 40.9 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVM 47
M + + + +AWR L N+ + I+I + V + V LI+V+
Sbjct: 1 MYMLKNY-IKIAWRNLTRNKSFSLINILG----LAVSMSVCLLIIVI 42
>gi|89896570|ref|YP_520057.1| hypothetical protein DSY3824 [Desulfitobacterium hafniense Y51]
gi|219667603|ref|YP_002458038.1| hypothetical protein Dhaf_1552 [Desulfitobacterium hafniense DCB-2]
gi|89336018|dbj|BAE85613.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219537863|gb|ACL19602.1| protein of unknown function DUF214 [Desulfitobacterium hafniense
DCB-2]
Length = 397
Score = 40.9 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 26/249 (10%), Positives = 70/249 (28%), Gaps = 10/249 (4%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV-- 68
VA+ + +N+ S ++ +G++IGV A+I V+++ + ++ + + ++
Sbjct: 9 VAFEGIRANKMR------SALTMLGIIIGVAAVITVVAIGQVGQAAIMSSLEKMGTNLFC 62
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSG-QAFVSGLSSGGSGVLVRGISNSDFS 127
V + + + + + V + S S + +
Sbjct: 63 VYPRSDEQSSLTEADMMTVQDLEVIRNVATDIQYISPADSWSFSAQYERKSKQVYAYGVW 122
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ + ++ + +T G
Sbjct: 123 PEYKQIRNIQLEKGRFLSEEDEKGGRRVAVIDSKLAEDLFGRGEALKKQITIFGASYTVI 182
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
T + +Y+ + N+ + V +E D + +I
Sbjct: 183 GITQRDDSFLMGGPNQRSSLYIPYSALRTMVNI-DYVPYVEGSAVSKDKTDSAMNQAKKI 241
Query: 248 LGNGVVVID 256
L + D
Sbjct: 242 LNSRHHAED 250
>gi|300782423|ref|YP_003762714.1| peptide ABC transporter permease [Amycolatopsis mediterranei U32]
gi|299791937|gb|ADJ42312.1| permease component of ABC-type antimicrobial peptide transport
system [Amycolatopsis mediterranei U32]
Length = 400
Score = 40.9 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 6/44 (13%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNG 52
+ A R L +N+ S ++ +G+ IGV A+I++++V NG
Sbjct: 7 LRFAVRGLTANKLR------SALTTLGITIGVAAVILLVAVGNG 44
>gi|312794458|ref|YP_004027381.1| hypothetical protein Calkr_2317 [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312181598|gb|ADQ41768.1| protein of unknown function DUF214 [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 392
Score = 40.9 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 33/252 (13%), Positives = 81/252 (32%), Gaps = 19/252 (7%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M+ F+ +A + + SN+ +F ++ +GV+IG+ A+I V+ + G + + R
Sbjct: 1 MAQFA-LAFKMAIKSILSNKLRSF------LTMLGVIIGIWAVIAVVGLAQGSTKSITDR 53
Query: 61 VLGINGHVVIQQ----KYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
+ + +++ V Y+ + + D I+ + + +
Sbjct: 54 LQRLGTNLIQINITGRNSNRNVTYEELQQFAEQHQDDIEAIAPTVSSSVTLKYGTNTHDT 113
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
+ G + + S + D D + V + + + I
Sbjct: 114 TLIGTTADYSLVRDVNVSSGRFILPIDVDYRQKVALVGTYIVKDLFNGQNPIGKKIKING 173
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
+G+ + D+ V + + AQ + + + D +
Sbjct: 174 QIFTVVGVLEERANS-------QEQSDDDQVIVPVTVAQRLTR-NAIIRNFAIKITDGNR 225
Query: 237 IEKTHENIVRIL 248
E + L
Sbjct: 226 SEAVMNYLNDFL 237
>gi|186686402|ref|YP_001869598.1| hypothetical protein Npun_F6383 [Nostoc punctiforme PCC 73102]
gi|186468854|gb|ACC84655.1| protein of unknown function DUF214 [Nostoc punctiforme PCC 73102]
Length = 426
Score = 40.9 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 35/258 (13%), Positives = 79/258 (30%), Gaps = 31/258 (12%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ---- 71
L+SN+ + ++ +GV+IG+ ++I + SV G ++ + +++ + V+
Sbjct: 30 LWSNKLR------TGLTMLGVIIGISSVIAITSVGQGVQKGVEQQIQALGTDVIQILAGA 83
Query: 72 ---------QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ ++ P V ++ A V S +
Sbjct: 84 ARSGNVRQGVGSSSTLTWEDAKAIATQAPSAQMVSAYLQRTAQVVYAGQNTSTTIYGTDL 143
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
N + Y + I+G + L + I
Sbjct: 144 NYPEVRNTHPQQGRYFTQEELDTVAQVAILGPTVQTTLFGQGVNPI-------GEKIRIQ 196
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN-----AVSGIEVFVKDPDAI 237
G + V+ + P + V++ L N +V+GI V + + +
Sbjct: 197 GEAYQVIGVMEPKGSQGPMDRDDQVFIPLTSMSKRLVGNNALVGVSVNGILVKGANQEQL 256
Query: 238 EKTHENIVRILGNGVVVI 255
E + +L +
Sbjct: 257 EAAQFQVTNLLRLRHNIY 274
>gi|146295699|ref|YP_001179470.1| hypothetical protein Csac_0659 [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409275|gb|ABP66279.1| protein of unknown function DUF214 [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 398
Score = 40.9 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 35/243 (14%), Positives = 74/243 (30%), Gaps = 7/243 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + L NR F +S +GV+IG+ A+IV + ++ + K++
Sbjct: 9 AFKIAAKSLIHNRTRTF------LSVLGVIIGICAIIVSVGLVQSVSISVSKQLEESGLD 62
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+I +Y + + ++ + P + V V + S +
Sbjct: 63 SLILALHYDIDIGEMSGYLNSKQNLIVGITPRKTYYTEVLSSDGKDYKCEVLLLKPSSYI 122
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ D ++ V I D + + + I +
Sbjct: 123 LENLKLVKGRFLSVLDEEKLNKVAIVFD-DQAEKLFNSKNGVLFKKLFIGGEEFEVIGTV 181
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ Y + + + + + FNLE A + + K E +
Sbjct: 182 AKQKRMTDISIGSSYYDINIIVPYKVGESIFNLEKASQMFYIKSINSIYNPKIKELLEEY 241
Query: 248 LGN 250
L N
Sbjct: 242 LQN 244
>gi|146318170|ref|YP_001197882.1| peptide ABC transporter permease [Streptococcus suis 05ZYH33]
gi|145688976|gb|ABP89482.1| ABC-type antimicrobial peptide transport system, permease
component [Streptococcus suis 05ZYH33]
Length = 256
Score = 40.9 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A + + +++ S ++ +G++IGV A+++++++ G + + K + G +V
Sbjct: 4 WKFALKSIMAHKMR------SLLTMLGIIIGVAAVVIIVAMGTGVAKSIEKSLAGDQNNV 57
Query: 69 VIQQ 72
+
Sbjct: 58 QVYF 61
>gi|325912260|ref|ZP_08174657.1| efflux ABC transporter, permease protein [Lactobacillus iners UPII
143-D]
gi|325475919|gb|EGC79088.1| efflux ABC transporter, permease protein [Lactobacillus iners UPII
143-D]
Length = 813
Score = 40.9 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 28/242 (11%), Positives = 71/242 (29%), Gaps = 19/242 (7%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
F + + R +F + F ++ +G+ L++ + + + +E + I
Sbjct: 436 SFSLKITARNVFRFKSRMF------MTILGIAGCCALLVMGLGIRDSLKEIADTQYGDII 489
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+ +I + + + V + + +
Sbjct: 490 KYDLIALHNHQIPQNNSHYQSIINDNYVKRHTYINYKVCHTKQPHKFIDSNIQVITFANK 549
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ R N G II + LA+ + + +GDK+ Y
Sbjct: 550 NVLKKYFDLRNRRNKERYLLNSSGAIINEKLAKIMHVKVGDKLTFKDNYN---------- 599
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+T Y ++M+ + Q F + + + + K +E ++
Sbjct: 600 ---HTKKVTISHICEMYLGHYLFMNRKTYQKVFQTSYTSNADMISLTSHKDLNKFNEKLL 656
Query: 246 RI 247
+
Sbjct: 657 KT 658
>gi|255316497|ref|ZP_05358080.1| ABC transporter, permease protein [Clostridium difficile
QCD-76w55]
Length = 453
Score = 40.9 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 14/87 (16%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M I F +++ L + I+I S + IGV ++ ++S+ +G + ++ +
Sbjct: 1 MKIIDYF--KLSYSNLKKRKIRTLINIFS------IAIGVTLIVTLVSLGSGLKSYVMSQ 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRL 87
+ +N + + + + +L
Sbjct: 53 IKELNNLQHVSVYNTKVQSSEELEKKL 79
>gi|157369914|ref|YP_001477903.1| macrolide transporter ATP-binding /permease [Serratia
proteamaculans 568]
gi|157321678|gb|ABV40775.1| ABC transporter-related protein [Serratia proteamaculans 568]
Length = 648
Score = 40.9 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 24/243 (9%), Positives = 80/243 (32%), Gaps = 8/243 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+++AWR + +++ + ++ +G++IG+ +++ ++ + + ++ ++ + I +
Sbjct: 257 ALVMAWRAMAASKMR------TALTMLGIIIGIASVVSILVIGDAAKQMVLADIKSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
V D + D+ + A ++S L ++ +
Sbjct: 311 TVDIYPGKDFGDDDPTFRQALKYDDLEALREQPYVNALSPTIASSMRLRLGNVDVAANVT 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK--INILSPYGDVTPMGMGIR 185
+ F R YG + + + + + + + +
Sbjct: 371 GVSEQFFRVYGMTFTQGVGIDQLQVQSQSQTVVIDANTQRRLFPNIKDVVGQVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ V + F V++ I V +++ ++ + +
Sbjct: 431 ATVVGVAKEKQSMFGSSKTLNVWVPYSTMANRLMGNAYFDSITVRIREGYNSQEAEQKLT 490
Query: 246 RIL 248
R+L
Sbjct: 491 RLL 493
>gi|119387855|ref|YP_918889.1| ABC transporter related [Paracoccus denitrificans PD1222]
gi|134048476|sp|A1BCE9|MACB3_PARDP RecName: Full=Macrolide export ATP-binding/permease protein MacB 3
gi|119378430|gb|ABL73193.1| ABC transporter related protein [Paracoccus denitrificans PD1222]
Length = 640
Score = 40.9 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 28/230 (12%), Positives = 70/230 (30%), Gaps = 9/230 (3%)
Query: 23 AFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQF 82
+ + ++ G++IGV +++ ++++ G +E+ +KR I + V+ +
Sbjct: 262 GASPVRTALTLSGIVIGVASVVAMLAIGRGAQEEFVKRASAIGTNWVVVGSDQDTRMPRR 321
Query: 83 IANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSN 142
D L + A V + V S + R
Sbjct: 322 PLTL-----DDAMALKGLPNVAGVMPGRWEQATVRAGAFSIDTDIIGTDRDFRGVHGWDV 376
Query: 143 DFDRGKGVIIG----KDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMR 198
L ++ + P G+ + M +
Sbjct: 377 VRGSFFSEADERGGSPVLLLGSTVAGTLFPDGRDPTGEFVFVNMSPFLVGGVLESKGLSE 436
Query: 199 FPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ +V M L+ + +S I V ++D +++++ + +
Sbjct: 437 NGSDRDKVVAMPLRSLESRVYGPGELSVIVVALQDMARLDESNALLREAM 486
>gi|170016373|ref|YP_001727292.1| peptide ABC transporter permease [Leuconostoc citreum KM20]
gi|169803230|gb|ACA81848.1| ABC-type antimicrobial peptide transport system, permease
component [Leuconostoc citreum KM20]
Length = 393
Score = 40.9 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 7/54 (12%)
Query: 8 EVIV-AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
E+ V A R L SN++ S ++ +G++IG+ A+I ++++ +G R M+K
Sbjct: 5 ELFVSACRSLLSNKRR------SVLTMVGIVIGIAAVITILALGDGARLAMMKN 52
>gi|116623218|ref|YP_825374.1| hypothetical protein Acid_4125 [Candidatus Solibacter usitatus
Ellin6076]
gi|116226380|gb|ABJ85089.1| protein of unknown function DUF214 [Candidatus Solibacter usitatus
Ellin6076]
Length = 408
Score = 40.9 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 29/226 (12%), Positives = 63/226 (27%), Gaps = 14/226 (6%)
Query: 1 MSIFSRFE-VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
MS+FS V +A + +++ +F ++ +GV+IG A+I V S++ G +
Sbjct: 1 MSLFSILAGVRLALDTIRAHKLRSF------LTVLGVIIGTGAVIGVGSIIAGLDGAITN 54
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
+ + VI K + + R + + + +
Sbjct: 55 MLRSFGPNTVIVTKTTAMGNASREERRRRPLELENARAIAERCTSVEHVSPFLFAPNGIH 114
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISI-------GDKINILS 172
+ K DL + + I ++
Sbjct: 115 TARYKGNDLYNIQLGGTEEGYAAGGTTMKAGRFFTDLENSHHMPIVVIGEDVQKQLLANE 174
Query: 173 PYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF 218
G + V+ P D+ + + + F
Sbjct: 175 TPIGKRITVDGHELEVVGVMDRPAASLPGQDDTRILIPYFTMRKMF 220
>gi|229077131|ref|ZP_04209835.1| ABC transporter, permease component [Bacillus cereus Rock4-18]
gi|228706150|gb|EEL58435.1| ABC transporter, permease component [Bacillus cereus Rock4-18]
Length = 856
Score = 40.9 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 28/241 (11%), Positives = 67/241 (27%), Gaps = 19/241 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A + + NR S+ + + +GVM+ M L+ SV ++ + + ++
Sbjct: 4 FKYAIKSIKENRLRT--SLIALGTALGVMLATMLLLGNNSVEETVKQQVKNNY--GDYNL 59
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+++ I + V + + NS
Sbjct: 60 QFGYMKNDQYLDDKEVDQIQNIKSLKTVSKVLIPYVIPNKPEISNQPAYWGVEPNSPE-- 117
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ + A + N + + K+
Sbjct: 118 -------------ILAYKIDQGRYPEKGAEVAITKSYVEKNGIKLGEKIEMPFPPFNKKT 164
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
TV+G+ + ++ Q NL+N + +++ V + + I +L
Sbjct: 165 VTVVGIINPPTMSAMKQTAFFPIEWLQNELNLKNKYNLVQLKVANANEKAFLVSEIKSVL 224
Query: 249 G 249
Sbjct: 225 S 225
Score = 40.5 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 36/255 (14%), Positives = 74/255 (29%), Gaps = 7/255 (2%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
R E ++ R + NR+ A IS+A I G M+ ++ + + S+ G R+ + K +
Sbjct: 457 RIETSISSRNVIRNRQKAAISVA--ILSFGFMLALVGSMYMNSMQEGMRQGIKKSLPADL 514
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQ-----AFVSGLSSGGSGVLVRG 120
V R+ I V + + S VR
Sbjct: 515 SIRVPMLGRENAQIPFEWLERIKQIKGVQNTAAIATDTKSKLVDYDFKKSDSEWYDFVRK 574
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + + N G + + L G+ + L +
Sbjct: 575 NNINPERMEVSGIDSTVFNQIKKIKVVSGKSLEEPLKNGEGVISKRTADYLGIKLNDKIK 634
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ + + M + +E IE+ V I +
Sbjct: 635 VQSQGHEPQLIKIASILEKNLQTGAMGVLVNEEWAKKNFQITGYESIEIIVDSHKNINEI 694
Query: 241 HENIVRILGNGVVVI 255
+ + +++ NG +
Sbjct: 695 QQKVNQVMKNGTNIE 709
>gi|195978241|ref|YP_002123485.1| ABC transporter permease protein [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|195974946|gb|ACG62472.1| ABC transporter permease protein [Streptococcus equi subsp.
zooepidemicus MGCS10565]
Length = 407
Score = 40.9 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 31/84 (36%), Gaps = 6/84 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A ++ ++ S ++ +G++IGV A++++M + + + V
Sbjct: 4 WKFALSSIWGHKLR------SILTMLGIIIGVAAVVIIMGLGAAMTKRVTDSFSNDQKEV 57
Query: 69 VIQQKYYPLVDYQFIANRLDFIPD 92
+ K D + A +
Sbjct: 58 QLYFKAKGDEDNPYAAFAVHENEQ 81
>gi|108758934|ref|YP_632376.1| putative macrolide efflux ABC transporter permease [Myxococcus
xanthus DK 1622]
gi|108462814|gb|ABF87999.1| putative macrolide efflux ABC transporter, permease protein
[Myxococcus xanthus DK 1622]
Length = 401
Score = 40.9 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 31/260 (11%), Positives = 70/260 (26%), Gaps = 28/260 (10%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKR---------VLGINGHVVIQQKYYPLVD 79
S ++ +G++IG+ A+I ++++ G + + +R +
Sbjct: 19 SLLTMLGIVIGIAAVITMVALGEGAQRSVAQRLQGLGTNVLTVRPGQAFTGGMIRAQASM 78
Query: 80 YQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGN 139
A L I+ + F + + + V G F Q +
Sbjct: 79 TIDDAEALRENARHIQAVAPEIESRFQVEYGAKNANLSVVGTWPDYFHVNQGQITNGRLF 138
Query: 140 VSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRF 199
+ + V++ LA + I + F
Sbjct: 139 TDAEDKGRRRVVVLGALAGAQLGLTDTASLVGESIRIRGIPFEVIGVLAEKGAQGF---- 194
Query: 200 PDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL----------G 249
+ + +Y+ L AQ + + I V A++ I + L
Sbjct: 195 -NNPDESLYIPLSTAQFRVMGSDRIRSIAVQAVSDTAMDDAMAEIDQKLRREHRLRPEQP 253
Query: 250 NGVVVIDWQQRYQIFFSCYE 269
+ D + +
Sbjct: 254 ADFNIRD----QASLLNTMQ 269
>gi|326777680|ref|ZP_08236945.1| protein of unknown function DUF214 [Streptomyces cf. griseus
XylebKG-1]
gi|326658013|gb|EGE42859.1| protein of unknown function DUF214 [Streptomyces cf. griseus
XylebKG-1]
Length = 846
Score = 40.9 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 21/54 (38%)
Query: 203 DNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
+ + + +L + SGIEV + D A + + LG G V+
Sbjct: 194 EQTVAFTDPVAQRLMLGRADRFSGIEVTLADGAAAGTVRAALGKQLGGGYDVLT 247
>gi|320107901|ref|YP_004183491.1| hypothetical protein AciPR4_2723 [Terriglobus saanensis SP1PR4]
gi|319926422|gb|ADV83497.1| protein of unknown function DUF214 [Terriglobus saanensis SP1PR4]
Length = 387
Score = 40.9 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 28/228 (12%), Positives = 72/228 (31%), Gaps = 23/228 (10%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
+ +S + + + V ++ ++ V NG + +R G ++++ + + D
Sbjct: 39 TLLSILAIAVEVTMILTLVGVSNGTLHESARRARGTGADILVRPPGTSALSTVSSSPMSD 98
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
+ DV + P + + G++ +F+ + F G +
Sbjct: 99 KLVDVFRAEPHIVMVTGTIVQPLEL-FDTLTGLNMDEFAKMSGGFRFVQGGLPV------ 151
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ I PY + +G K + + +
Sbjct: 152 ---------------QDTDLIIDEPYAREKHLQVGSTLKLISQEWHVSGIYEPGKLARIC 196
Query: 209 MSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
L+ Q + + +S I + V DP+ + +++ G +
Sbjct: 197 ARLEALQRFTANTHRLSQIYLKVDDPNQAQAIVDSLRAKYP-GYQIYT 243
>gi|300870532|ref|YP_003785403.1| hypothetical protein BP951000_0904 [Brachyspira pilosicoli 95/1000]
gi|300688231|gb|ADK30902.1| hypothetical protein BP951000_0904 [Brachyspira pilosicoli 95/1000]
Length = 384
Score = 40.9 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 29/95 (30%), Gaps = 4/95 (4%)
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAI 237
G GI S +G + D +Y L F LE + V++KD
Sbjct: 150 DFGEGISLGSLMAVGAISLNNSASDAITIYSPLNAIYEIFGLEYGNAHNLLVYLKDYKKA 209
Query: 238 EKTHENIVRILGNG---VVVIDWQQRYQIFFSCYE 269
+ N+ + DW+ S E
Sbjct: 210 TEIKNNLNQYFNENNLNYEAKDWKDLNAFLLSVIE 244
>gi|261885834|ref|ZP_06009873.1| permease, putative [Campylobacter fetus subsp. venerealis str.
Azul-94]
Length = 48
Score = 40.9 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 29/42 (69%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMN 51
+ +YL ++ FI++++ ++F+GV IG+M LIV M++M
Sbjct: 4 YLLLKYLRFDKTQPFITLSAILAFLGVSIGLMVLIVAMAIMQ 45
>gi|182437065|ref|YP_001824784.1| putative ABC transporter permease protein [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|178465581|dbj|BAG20101.1| putative ABC transporter permease protein [Streptomyces griseus
subsp. griseus NBRC 13350]
Length = 845
Score = 40.9 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 21/54 (38%)
Query: 203 DNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
+ + + +L + SGIEV + D A + + LG G V+
Sbjct: 193 EQTVAFTDPVAQRLMLGRADRFSGIEVTLADGAAAGTVRAALGKQLGGGYDVLT 246
>gi|162456925|ref|YP_001619292.1| putative ABC transporter integral membrane protein [Sorangium
cellulosum 'So ce 56']
gi|161167507|emb|CAN98812.1| putative ABC transporter integral membrane protein [Sorangium
cellulosum 'So ce 56']
Length = 706
Score = 40.9 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 11/45 (24%), Positives = 21/45 (46%), Gaps = 6/45 (13%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVM 47
+F I+A R L ++R + + +GV +G + VV+
Sbjct: 8 LFQPLVRILALRNLRADR------FGAMAAVLGVALGTATVNVVL 46
>gi|293392241|ref|ZP_06636575.1| ABC transporter related protein [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290952775|gb|EFE02894.1| ABC transporter related protein [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 645
Score = 40.9 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 30/254 (11%), Positives = 86/254 (33%), Gaps = 13/254 (5%)
Query: 4 FSRFEVIVAWRY----LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
FS+ +++ A+R + +++ S ++ +G++IG+ +++ V+++ NG ++ +++
Sbjct: 245 FSKDQLMEAFRMSVSAIVAHKMR------SLLTMLGIIIGITSVVSVVALGNGSQQKILE 298
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS-GVLV 118
+ GI + + D + + I D + Q+ SS G V
Sbjct: 299 NIRGIGTNTMTIFNGNGFGDRRSRHIQNLKISDANTLSKQSYIQSVTPNTSSSGILVVGN 358
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLG--ISIGDKINILSPYGD 176
+ ++++ + + G K I
Sbjct: 359 KSFTSANLYGISEQYFDVEGLKLKQGPSIKPRTIVDQKLTRCRAGRKCKKSHFCQRKIPL 418
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
+ + V+ ++ ++ +Y + + I V + D
Sbjct: 419 QNVIFNKRPFRVIGVVSDQQLGGFPGNSLNLYSPYSTVLNKITGGSRIGSITVKISDDVN 478
Query: 237 IEKTHENIVRILGN 250
+++ +L +
Sbjct: 479 STVAEKSLTELLKS 492
>gi|257456770|ref|ZP_05621954.1| macrolide export ATP-binding/permease protein MacB 2 [Treponema
vincentii ATCC 35580]
gi|257445776|gb|EEV20835.1| macrolide export ATP-binding/permease protein MacB 2 [Treponema
vincentii ATCC 35580]
Length = 409
Score = 40.9 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 34/276 (12%), Positives = 79/276 (28%), Gaps = 20/276 (7%)
Query: 7 FEVIV-AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
+E + A + + +S +G+ IGV + ++ ++ + + M+K
Sbjct: 2 WEDFINALNNFRVKKLR------TILSLLGIAIGVTVVTIISNIGSSMQASMVKMFNLDT 55
Query: 66 GHVVIQQKYYPLVDYQFIANRL--------DFIPDVIKVLPFVSGQAFVSGLSSGGSGVL 117
+++ + + + +P + V A +S +
Sbjct: 56 MNIIEIEPRWDFQTRKSNITFTEKYRTELEQAVPLIKNVFYTGFFNATLSRKTLTLENKR 115
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVII--GKDLARNLGISIGDKINILSPYG 175
V GI G +DF + II ++ +
Sbjct: 116 VNGIEPGWLEANNYELLYGQGFTLDDFANRRHKIILGEDEVNSLFPEGDAIGKTVTVTVS 175
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIE-VFVKDP 234
G S+ V G+ + + ++ + S + V + D
Sbjct: 176 YRGTSGWNFIPFSFEVCGVVKSNDNFSNIEAYFIPRSFVVEDMGIGKNDSDLATVQIHDS 235
Query: 235 DAIEKTHENIVRILGNGVVVID--WQQRYQIFFSCY 268
+ I++ E I + D W Y+ +
Sbjct: 236 NYIDEATEQIKAFSDSFAKASDTLWTFSYKELLTDI 271
>gi|159027860|emb|CAO87073.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 404
Score = 40.9 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 40/274 (14%), Positives = 92/274 (33%), Gaps = 21/274 (7%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + + +A+ L +N+ S ++ +G+ IG ++I ++ V G ++ +++
Sbjct: 1 MEMLEN--LKMAFSALMANKLR------SGLTMLGIAIGNASVIALVGVGEGAQKVALEQ 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ +V+ V R D + V A +S SG + +
Sbjct: 53 FEALGPNVLFVSTSSRNVRRTIPNPRPLTYEDAQAIASQVPAIAAISPEFSGKTILSFGN 112
Query: 121 ISNS---------DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL 171
+++ + S+ + +D R VI+ + +
Sbjct: 113 RTSNSPLVGVGADYLNVRNRQLSKGRFIMESDLKRDNRVIVLGSELAKNFFGNRNPVGEN 172
Query: 172 SPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFV 231
G+++ +GI ++ + + +Q F + ++ I V
Sbjct: 173 LRIGNLSFQVIGILQAKGSLFEANQDDRALIPLTTMSNRVQGRSSIFGIP--LTHISVLA 230
Query: 232 KDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFF 265
K+ I+ I +L V D + Y F
Sbjct: 231 KNSSQIKAAQFQISNLLQMRHQVSD--ENYVQIF 262
>gi|306833757|ref|ZP_07466883.1| ABC superfamily ATP binding cassette transporter, membrane
protein [Streptococcus bovis ATCC 700338]
gi|304424094|gb|EFM27234.1| ABC superfamily ATP binding cassette transporter, membrane
protein [Streptococcus bovis ATCC 700338]
Length = 410
Score = 40.9 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A + ++ +F ++ +G++IGV +++V+M++ G + + +
Sbjct: 4 WKFALSSIMGHKMRSF------LTMLGIIIGVASVVVIMALGQGMTKQITDMFSADTRDI 57
Query: 69 VIQQ 72
I
Sbjct: 58 EIYY 61
>gi|118475255|ref|YP_891934.1| macrolide-specific ABC-type efflux carrier [Campylobacter fetus
subsp. fetus 82-40]
gi|134048478|sp|A0RP01|MACB_CAMFF RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|118414481|gb|ABK82901.1| macrolide-specific ABC-type efflux carrier [Campylobacter fetus
subsp. fetus 82-40]
Length = 641
Score = 40.9 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 30/249 (12%), Positives = 80/249 (32%), Gaps = 10/249 (4%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
+ S++ +F ++ +G++IG+ ++I V+++ G ++ ++ + + + +
Sbjct: 260 IKSHKLRSF------LTMLGIIIGIASVICVVALAKGSQQKILSDINNMGTNTITIFPGK 313
Query: 76 PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSR 135
+ R+ + L S SG+L + S S
Sbjct: 314 GF--GDMHSGRVRSLSIDDSNLLGKLDFVDFSTPRMNTSGLLTYANQSFSGSLRSGSEYS 371
Query: 136 FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMF 195
+ +R+ I + D + + +T++G+
Sbjct: 372 LAISGLKIEKGRDFTKDDIINSRSNIIIDQFTKDAFFKDVDPIGKVILFNKQPFTIVGLV 431
Query: 196 RMRFPDYDNGM--VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVV 253
+ + VY + + I + +KD + ++I+ +L
Sbjct: 432 KRDETSFSGDNLTVYAPYTTTMNKLTGDRDIRSIMLKLKDGVNAQVAEQSIIEVLKIRRG 491
Query: 254 VIDWQQRYQ 262
D+ R
Sbjct: 492 SKDFFTRNS 500
>gi|288961872|ref|YP_003452182.1| permease of ABC transporter [Azospirillum sp. B510]
gi|288914152|dbj|BAI75638.1| permease of ABC transporter [Azospirillum sp. B510]
Length = 406
Score = 40.9 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
A R L + R+ S ++ +G+ IG A++ ++S+ RE +++ L +
Sbjct: 24 ALRNLGAMRQR------SLLALLGIAIGTAAVVALISIGENAREHSMRQFLAMGAD 73
>gi|262402908|ref|ZP_06079468.1| ABC-type transport system involved in lipoprotein release permease
component [Vibrio sp. RC586]
gi|262350407|gb|EEY99540.1| ABC-type transport system involved in lipoprotein release permease
component [Vibrio sp. RC586]
Length = 419
Score = 40.9 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 53/281 (18%), Positives = 98/281 (34%), Gaps = 43/281 (15%)
Query: 12 AWR----YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGF--REDMIKRVLGIN 65
AWR L NR+ + +S IS I + + L + + G + + +
Sbjct: 8 AWRLAALNLQRNRRRSVLS----ISIIAIAL----LALTSAGGFGLYTYDSLRESTARDV 59
Query: 66 GHVVIQQKYYPLVDYQ-----------FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
GH+ I Q Y + + I L P + + P + VS +
Sbjct: 60 GHLTISQLGYFEQEEETPLANGLEGSDQIRQALLANPKIRGIQPRIELTGLVSNGAKSTI 119
Query: 115 GVLVRGISNSDFSY-----LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN 169
+ +++ + N V++G DLARN+ + +GD I
Sbjct: 120 FTGLGVDYKEFDMKGPFLDVRDGQTLQDPNSPRFDPTQPQVMLGVDLARNMKVGVGDWIT 179
Query: 170 ILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV 229
+LS D + + + + P+ D +Y+ L AQ N + +S + V
Sbjct: 180 LLSTTADGALNALDFQVRGL-----YSTGVPELDKRQLYLHLTSAQELLN-SSKISTLSV 233
Query: 230 FVKDPDAIEKTHENIVRILG-----NGVVVIDWQQRYQIFF 265
++ + ++ + L + V WQQ FF
Sbjct: 234 YLFTTEQAQEMQIWVEEQLNKLHLAQDLQVTPWQQL--AFF 272
>gi|154496082|ref|ZP_02034778.1| hypothetical protein BACCAP_00366 [Bacteroides capillosus ATCC 29799]
gi|150274637|gb|EDN01701.1| hypothetical protein BACCAP_00366 [Bacteroides capillosus ATCC 29799]
Length = 1341
Score = 40.9 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 35/247 (14%), Positives = 76/247 (30%), Gaps = 19/247 (7%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F V R LF +K +++ IG+ G ALI+ G R + V
Sbjct: 959 MSFTWKVTMRNLFRYKKRF------WMTVIGIG-GCTALIIT---GFGIRNSLYD-VFDK 1007
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ ++ + L I V+ VS VS SN
Sbjct: 1008 QYDEITPYSAQVILMDNITEDELTEIAAVLDGSELVSQWMSVSNQPVTAESDSRSLDSNV 1067
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + +DF + +++ + ++ + V +
Sbjct: 1068 YLFTVADQ------ERFSDFVHLRHRQDNAEVSLSQDGAVITEKLADMLDVGVGDTITLV 1121
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV-FVKD-PDAIEKTHE 242
+ +Y VY++ + + F + ++ + V + +D + + E
Sbjct: 1122 DGDNRRAEVTITDLTENYVFHYVYITEECYESLFGQTSEINSLMVTYTEDTEENSDTVAE 1181
Query: 243 NIVRILG 249
++ + G
Sbjct: 1182 QLIPLSG 1188
>gi|326200887|ref|ZP_08190759.1| protein of unknown function DUF214 [Clostridium papyrosolvens DSM
2782]
gi|325988455|gb|EGD49279.1| protein of unknown function DUF214 [Clostridium papyrosolvens DSM
2782]
Length = 420
Score = 40.9 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 28/265 (10%), Positives = 74/265 (27%), Gaps = 26/265 (9%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQF------ 82
S FI V+ ++ L++ ++ NG + + L + ++ F
Sbjct: 9 SIFVFIAVLFSILILLISSALTNGMVKTINYNYLQVQSGHIVAMWKAHYNLSPFLPGKFL 68
Query: 83 ----IANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYG 138
+ + + + S S + + YG
Sbjct: 69 NPNTSKSFNYEEDEKNIAAAKILDDFLAKNSDKVDFAAKIIRRSVSYSVGSNSYATILYG 128
Query: 139 NVSNDFDRGKGVIIGKDLARNL-----------GISIGDKINILSPYGDVTPMGMGIRSK 187
D D + + + +
Sbjct: 129 VTKEDADNLNKSKAVNLVDGKWPAKLGEIMISEDRLQKGNLKLGDSIKIESFDISNKPVS 188
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL-ENAVSGIEVFVKDPDAIEKTHENIVR 246
+ +Y+ +M+ Q A+ FN+ ++ +++++KD + ++ + + +
Sbjct: 189 QSYTIVGVYGDGAEYNGYFGFMTDQSAKKLFNMRDDMYDMVKIYLKDINDSKELSKELDK 248
Query: 247 IL---GNGVVVIDWQQRYQIFFSCY 268
L + + DW +FF+
Sbjct: 249 ALLVKSDVLRAQDWYDA-GLFFTSL 272
>gi|25011471|ref|NP_735866.1| hypothetical protein gbs1429 [Streptococcus agalactiae NEM316]
gi|24413009|emb|CAD47088.1| Unknown [Streptococcus agalactiae NEM316]
Length = 415
Score = 40.9 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A + ++ AF ++ +G++IGV +++++M++ G ++ + + ++
Sbjct: 4 WKFALSSILGHKMRAF------LTMLGIIIGVASVVLIMALGKGMKDSVTNEITKSQKNL 57
Query: 69 VIQQKYYPLVDYQFI 83
I K +
Sbjct: 58 QIYYKTKEDQKNEDN 72
>gi|305665223|ref|YP_003861510.1| putative ABC transporter [Maribacter sp. HTCC2170]
gi|88709976|gb|EAR02208.1| putative ABC transporter [Maribacter sp. HTCC2170]
Length = 415
Score = 40.9 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 27/233 (11%), Positives = 75/233 (32%), Gaps = 11/233 (4%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
+ N+ F++ S S G+ L++++ G + + + + +
Sbjct: 14 IRKNKLRTFLTGLSVAS------GIFILVILLGFGQGMQNGIAQEFEEDASNRIAVWTQV 67
Query: 76 PLVDYQ-----FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
+++ + D I+ + + + V + S
Sbjct: 68 TTKEHKGLNPGRPIQIRNENYDHIESRFSDKLKDKSAYFMVRNAMVNYKTESVGYSVRGI 127
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
N +F N R +++A+ IS K I + I +
Sbjct: 128 NGGFQFIENQYISEGRYINYKDQRNVAKVAVISNTIKKEIFKDGQSPLNEYIDISGIQFK 187
Query: 191 VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
V+G++ + + +++ + AQ FN + ++ + ++ + ++
Sbjct: 188 VIGVYGDMGGEREEERIFIPMSTAQRVFNGADRINNLYYTLQPVENFDQAVAE 240
>gi|20090596|ref|NP_616671.1| hypothetical protein MA1744 [Methanosarcina acetivorans C2A]
gi|19915630|gb|AAM05151.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 401
Score = 40.5 bits (92), Expect = 0.21, Method: Composition-based stats.
Identities = 32/217 (14%), Positives = 75/217 (34%), Gaps = 4/217 (1%)
Query: 33 FIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPD 92
+G+ IGV ++ V+S G R + ++ + + + + + + + + +
Sbjct: 27 LLGIAIGVATVVAVVSFGEGLRINAVE-EIQKSRDLTLIEVSPGIRGDGLVLISNSKVEE 85
Query: 93 VIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVII 152
+ + V + +S G+ + G+ S + + S + +++
Sbjct: 86 IKEHAELVCPYVKDAYVSPSGTYFELFGVQEVYRSANELELAGGTWFDSGEDSEENRIVL 145
Query: 153 GKDLARNLGISIGDKINILS--PYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMS 210
G DL L G KI G + K + + +M
Sbjct: 146 GSDLWEKLEKIDGAKIGTPITASLRLYGEDGRPLDKKVTFTPVGHLKPSGNEIDSGAFMK 205
Query: 211 LQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
L+ A+ E GI + V+ + +T E + ++
Sbjct: 206 LESAKELSEKE-HYDGILIKVESSSLVHETREQVEKL 241
>gi|328476909|gb|EGF47242.1| outer membrane-specific lipoprotein transporter subunit LolC
[Lactobacillus rhamnosus MTCC 5462]
Length = 69
Score = 40.5 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 19/47 (40%), Gaps = 3/47 (6%)
Query: 222 NAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
++G +F++ P ++ + L G V DW+ R F
Sbjct: 7 GNITGWRLFLQQPLTVDTLS---QQALPAGTVWKDWRDRKGELFQAV 50
>gi|289674792|ref|ZP_06495682.1| ABC transporter [Pseudomonas syringae pv. syringae FF5]
Length = 515
Score = 40.5 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 36/252 (14%), Positives = 95/252 (37%), Gaps = 10/252 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++AW L S+R + ++ +G++IG+ +++ ++++ G + ++K + I +
Sbjct: 124 AFVMAWVALISHRMR------TLLTMLGIIIGITSVVSIVAIGEGAKRYVLKDIEAIGSN 177
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + + + + DV + + + ++ S
Sbjct: 178 TIEVFPGSDFGDTKSMDIQTLALSDVAALSSQYYIDSATPNIGRNMLLRYRNIDVSATVS 237
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ S+ + G G + A+ + I +I + P D + + +
Sbjct: 238 GVSPSYFQVRGTKMGSG-VGFNKDDARRQAQVVVIDYNTRIRLFGPKVDPLGQVILVGNL 296
Query: 188 SYTVLGMFRMRFPDYDNG---MVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
TV+G+ + +D ++M + A ++ + I V VKD + +N+
Sbjct: 297 PCTVIGVTENKKNIFDTSKNLNIWMPYETASGRLLGQSYLDSITVRVKDGQPSKVVEDNV 356
Query: 245 VRILGNGVVVID 256
+++ D
Sbjct: 357 NKLMQKRHGTKD 368
>gi|309804103|ref|ZP_07698184.1| efflux ABC transporter, permease protein [Lactobacillus iners
LactinV 11V1-d]
gi|308163871|gb|EFO66137.1| efflux ABC transporter, permease protein [Lactobacillus iners
LactinV 11V1-d]
Length = 813
Score = 40.5 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 28/242 (11%), Positives = 71/242 (29%), Gaps = 19/242 (7%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
F + + R +F + F ++ +G+ L++ + + + +E + I
Sbjct: 436 SFSLKITARNVFRFKSRMF------MTILGIAGCCALLVMGLGIRDSLKEIADTQYGDII 489
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+ +I + + + V + + +
Sbjct: 490 KYDLIALHNHQIPQNNSHYQSIINDNYVKRHTYINYKVCHTKQPHKFIDSNIQVITFANK 549
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ R N G II + LA+ + + +GDK+ Y
Sbjct: 550 NVLKKYFDLRNRRNKERYLLNSSGAIINEKLAKIMHVKVGDKLTFKDNYN---------- 599
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+T Y ++M+ + Q F + + + + K +E ++
Sbjct: 600 ---HTKKVTISHICEMYLGHYLFMNRKTYQKVFQTSYTSNADMISLTSHKDLNKFNEKLL 656
Query: 246 RI 247
+
Sbjct: 657 KT 658
>gi|57242014|ref|ZP_00369954.1| ABC transporter, ATP-binding protein [Campylobacter upsaliensis
RM3195]
gi|57017206|gb|EAL53987.1| ABC transporter, ATP-binding protein [Campylobacter upsaliensis
RM3195]
Length = 641
Score = 40.5 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 28/243 (11%), Positives = 74/243 (30%), Gaps = 9/243 (3%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A+ + +++ +F ++ +G++IG+ +++ V+++ G + +++ + +
Sbjct: 250 FKIAYSSIIAHKLRSF------LTMLGIIIGIASVVCVVALGLGSQVKVLQTTSSLGTNT 303
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF-- 126
+ + D + RL+F S +SG + ++
Sbjct: 304 IEIRPGRGFGDLRSGKTRLNFSDLETLRSLEYLEAVEASERTSGVLTYTNKSLNARAEGV 363
Query: 127 -SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
N ++ V + +
Sbjct: 364 GVNSFNMDGLKLEVGRILDEKDLSVSANVAVLDFNAKKNIFPNVKSEELLGKIVIFNSTP 423
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
K +L R + +Y+ + + I V VKD + I+
Sbjct: 424 FKIIGILQKDTRRPISDNIVRLYIPYTTLMNKLTGDRKLREIIVKVKDNVSSSLAENAII 483
Query: 246 RIL 248
R+L
Sbjct: 484 RVL 486
>gi|22537506|ref|NP_688357.1| permease, putative [Streptococcus agalactiae 2603V/R]
gi|76797699|ref|ZP_00779967.1| ABC transporter, ATP-binding protein NMB0549 [Streptococcus
agalactiae 18RS21]
gi|77406377|ref|ZP_00783438.1| ABC transporter, ATP-binding protein [Streptococcus agalactiae
H36B]
gi|22534386|gb|AAN00230.1|AE014254_10 permease, putative [Streptococcus agalactiae 2603V/R]
gi|76586923|gb|EAO63413.1| ABC transporter, ATP-binding protein NMB0549 [Streptococcus
agalactiae 18RS21]
gi|77175001|gb|EAO77809.1| ABC transporter, ATP-binding protein [Streptococcus agalactiae
H36B]
Length = 415
Score = 40.5 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A + ++ AF ++ +G++IGV +++++M++ G ++ + + ++
Sbjct: 4 WKFALSSILGHKMRAF------LTMLGIIIGVASVVLIMALGKGMKDSVTNEITKSQKNL 57
Query: 69 VIQQKYYPLVDYQFI 83
I K +
Sbjct: 58 QIYYKTKEDQKNEDN 72
>gi|254442733|ref|ZP_05056209.1| efflux ABC transporter, permease protein [Verrucomicrobiae
bacterium DG1235]
gi|198257041|gb|EDY81349.1| efflux ABC transporter, permease protein [Verrucomicrobiae
bacterium DG1235]
Length = 427
Score = 40.5 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 27/74 (36%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +GV+IGV A+I++ MNG + + +K+ +
Sbjct: 31 SLLTALGVIIGVWAVILIGVGMNGLDTGFKNSLSMLGDDHFYIEKFPWRDVGDDWRTYIR 90
Query: 89 FIPDVIKVLPFVSG 102
+ ++
Sbjct: 91 RPNFEARYAEDLND 104
>gi|163815540|ref|ZP_02206913.1| hypothetical protein COPEUT_01705 [Coprococcus eutactus ATCC 27759]
gi|158449177|gb|EDP26172.1| hypothetical protein COPEUT_01705 [Coprococcus eutactus ATCC 27759]
Length = 446
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 36/98 (36%), Gaps = 6/98 (6%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ + + F ++ +GVMIGV++++ +MSV G +++MI V+
Sbjct: 5 WHLCLMNMKRRKIRTF------LTVLGVMIGVISVVALMSVGLGVKKEMIDSVVDSGSVN 58
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFV 106
I+ ++ I K +
Sbjct: 59 QIKVYSETGGKHKDRMITDKTIETFSKFSNVSGCYSVY 96
>gi|157414889|ref|YP_001482145.1| macrolide ABC transporter ATPase/inner membrane protein
[Campylobacter jejuni subsp. jejuni 81116]
gi|157385853|gb|ABV52168.1| ABC-type transmembrane transport protein [Campylobacter jejuni
subsp. jejuni 81116]
gi|307747526|gb|ADN90796.1| Macrolide export ATP-binding/permease protein macB [Campylobacter
jejuni subsp. jejuni M1]
gi|315931807|gb|EFV10762.1| macrolide export ATP-binding/permease protein macB [Campylobacter
jejuni subsp. jejuni 327]
Length = 641
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 29/243 (11%), Positives = 75/243 (30%), Gaps = 9/243 (3%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A+ + +++ S ++ +G++IG+ +++ V+++ G + +++ + + +
Sbjct: 250 FKIAYSSILAHKLR------SVLTMLGIIIGIASVVCVVALGLGSQAKVLESIARLGTNT 303
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + D + RL+F +SG + +S
Sbjct: 304 IEIRPGRGFGDLRSGKTRLNFSDLETLRSLEYLEAVDAHSNTSGVATYTNISLSARAEGV 363
Query: 129 LQNSFSR---FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
N+F+ + + +
Sbjct: 364 GVNNFAIEGLRIDAGRILNNDDVKNSTNVAVLDFNAKKNLFPDEKSENILGRVVLFNSQP 423
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
K VL + + + +Y+ + + I V VKD + I+
Sbjct: 424 FKIIGVLQKDTDKPIEDNVVRLYIPYTTLMNKLTGDRNLREIIVKVKDDVSSTLAENAII 483
Query: 246 RIL 248
RIL
Sbjct: 484 RIL 486
>gi|153938907|ref|YP_001389950.1| putative ABC transporter, permease protein [Clostridium botulinum F
str. Langeland]
gi|152934803|gb|ABS40301.1| putative ABC transporter, permease protein [Clostridium botulinum F
str. Langeland]
Length = 822
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 29/260 (11%), Positives = 76/260 (29%), Gaps = 21/260 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M +F + +A+ + N+ + + + +M+ I+ S + + + K
Sbjct: 1 MKLF----LKIAFNSIKKNKIRYMLLTCTLVLSTIIMLSTS--IIKDSAIKIREDQLRKT 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
L + + P + + I N + + + ++P + G A + + + V
Sbjct: 55 TLNSQLVITTADEKDPFFNPKDIINSIKDVDGISHIVPRIGGMAKDAKTLKDINIIGVDL 114
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
++ + N+ + L I +
Sbjct: 115 NKQKAAFPIELIDKYKVKDKENEIIINEKYAKENSLKVGAKIKLLIGTRNKEFIISGISK 174
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
D +S+ +AQ + ++ I + +K+ D I
Sbjct: 175 ---------------NTGVFDPSMNTAMISIDKAQYLLDQKDNAYSIGITIKNLDDINNM 219
Query: 241 HENIVRILGNGVVVIDWQQR 260
E I + + ++
Sbjct: 220 IEKIKPKVSSKFIIQQRYDM 239
>gi|123441538|ref|YP_001005524.1| putative ABC transporter, ATP-binding protein [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|122088499|emb|CAL11292.1| putative ABC transporter, ATP-binding protein [Yersinia
enterocolitica subsp. enterocolitica 8081]
Length = 651
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 21/235 (8%), Positives = 72/235 (30%), Gaps = 2/235 (0%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
+ ++ +G++IG+ +++ V+++ G ++ ++ + + + D + A
Sbjct: 275 TLLTMLGIIIGIASVVSVVALGKGSQQQVLANINSMGTSTLEIFPGKDFGDMRSAAIHTL 334
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
D + + +S+ + + + + + G
Sbjct: 335 RATDADALAQQGYIHSVTPTVSTSTTLRYGNKSVSGTVNGVGEQYFLVRGYTLAQGMAFN 394
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS--KSYTVLGMFRMRFPDYDNGM 206
+ + + + + + + + V + F +N
Sbjct: 395 RTSVDNLMQEAVIDENTRDKLFPNGENPLGKVILLGSLPCRVIGVAAKKQSGFGSDENLN 454
Query: 207 VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRY 261
V++ A ++ + I V V D + + + ++L D+
Sbjct: 455 VWIPYTTAMKRMLGQSYLKSITVRVNDDIDLANAEQGVTKLLTQRHGTQDFFVMN 509
>gi|41614969|ref|NP_963467.1| hypothetical protein NEQ175 [Nanoarchaeum equitans Kin4-M]
gi|40068693|gb|AAR39028.1| NEQ175 [Nanoarchaeum equitans Kin4-M]
Length = 381
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 30/214 (14%), Positives = 74/214 (34%), Gaps = 15/214 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMAL--IVVMS------VMNGFREDMIKR 60
+ +A + + + S ++ IGV IG+ A+ +++S ++N F +
Sbjct: 5 LKLALKNIQRRKLR------SLLTTIGVTIGIGAINYFLILSKSLEYGIINTFESLGKDK 58
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
++ + G V + I N ++ +P + V+P + + + + V+
Sbjct: 59 LIILPGKRVGFSFSTGWYFSKSIVNSIEHLPSIKYVIPGKFVTSTIEHKNKQLNVVIYGF 118
Query: 121 ISNSDFSYLQNSFSRFYG-NVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ Q ++ G SN+ + G + KDL+ +G I +K
Sbjct: 119 PLDKMRLLTQLGYNLREGRFPSNNKECVVGYGVYKDLSIEIGDKISNKFKCKVVGILEQI 178
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQE 213
+ + ++ ++
Sbjct: 179 GSQREDYTLIVSENVLEKHYNLNQYNFIFAIAKD 212
>gi|76787036|ref|YP_330000.1| ABC transporter, permease protein, putative [Streptococcus
agalactiae A909]
gi|77412597|ref|ZP_00788883.1| ABC transporter, ATP-binding protein [Streptococcus agalactiae
CJB111]
gi|76562093|gb|ABA44677.1| ABC transporter, permease protein, putative [Streptococcus
agalactiae A909]
gi|77161348|gb|EAO72373.1| ABC transporter, ATP-binding protein [Streptococcus agalactiae
CJB111]
Length = 415
Score = 40.5 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A + ++ AF ++ +G++IGV +++++M++ G ++ + + ++
Sbjct: 4 WKFALSSILGHKMRAF------LTMLGIIIGVASVVLIMALGKGMKDSVTNEITKSQKNL 57
Query: 69 VIQQKYYPLVDYQFI 83
I K +
Sbjct: 58 QIYYKTKEDQKNEDN 72
>gi|305433141|ref|ZP_07402297.1| macrolide-specific efflux protein MacB [Campylobacter coli JV20]
gi|304443842|gb|EFM36499.1| macrolide-specific efflux protein MacB [Campylobacter coli JV20]
Length = 641
Score = 40.5 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 29/243 (11%), Positives = 76/243 (31%), Gaps = 9/243 (3%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A+ + +++ S ++ +G++IG+ +++ V+++ G + +++ + + +
Sbjct: 250 LKIAYSSILAHKLR------SILTMLGIIIGIASVVCVVALGLGSQAKVLESIARLGTNT 303
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + D + RL+F +SG + +S
Sbjct: 304 IEIRPGKGFGDLRSGKTRLNFSDLETLRSLDYLEAVDAHSNTSGVATYTNISLSARAEGV 363
Query: 129 LQNSFSR---FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
N+F+ + + +
Sbjct: 364 GVNNFAIEGLKLQVGRILNNEDIETNANVAVLDFNAKKNLFPHQKSEDVLGRVVIFNSQP 423
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
K VL + + + +YM + + I V VKD + ++
Sbjct: 424 FKIIGVLQKDTEKPIEDNVVRLYMPYTTLMNKLTGDRNLREIIVKVKDDVSSTLAENAVI 483
Query: 246 RIL 248
RIL
Sbjct: 484 RIL 486
>gi|146342524|ref|YP_001207572.1| macrolide ABC transporter ATP-binding/membrane protein
[Bradyrhizobium sp. ORS278]
gi|146195330|emb|CAL79355.1| putative macrolide ABC transporter, fusion of ATP-binding
(N-terminal) and membrane (C-terminal) domains
[Bradyrhizobium sp. ORS278]
Length = 654
Score = 40.5 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 27/239 (11%), Positives = 71/239 (29%), Gaps = 3/239 (1%)
Query: 26 SIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIAN 85
+ +F++ +G++IGV ++I+V+++ G + +++ + + + + D +
Sbjct: 274 RLRAFLTMLGIIIGVASVILVLALGRGSQARVLENINRLGTNTLEFFPGKDFGDTKASKI 333
Query: 86 RLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFD 145
R + D + A +S+ + + S + + R +
Sbjct: 334 RTLVLADSKVMAEQPYVDAISPTVSTTSTLRYGAIEVTAQVSGVGEQYFRVKNTELAEGS 393
Query: 146 RGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVL---GMFRMRFPDY 202
I + K + I ++ + F
Sbjct: 394 YLDAETIRSYAQDAVIDDNARKALFPDSDVSPLGSVVLIGKVPCRIVGVTKQQQAGFGSS 453
Query: 203 DNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRY 261
+VY+ Q F + I + V + + +L D+
Sbjct: 454 STPIVYLPYTTVQARFTGNQVLRSISMRVDEATPMADAERAATALLTARHNAKDFFVLN 512
>gi|225868430|ref|YP_002744378.1| permease [Streptococcus equi subsp. zooepidemicus]
gi|225701706|emb|CAW99050.1| putative permease [Streptococcus equi subsp. zooepidemicus]
Length = 408
Score = 40.5 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 31/84 (36%), Gaps = 6/84 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A ++ ++ S ++ +G++IGV A++++M + + + V
Sbjct: 5 WKFALSSIWGHKLR------SILTMLGIIIGVAAVVIIMGLGAAMTKRVTDSFSNDQKEV 58
Query: 69 VIQQKYYPLVDYQFIANRLDFIPD 92
+ K D + A +
Sbjct: 59 QLYFKAKGDEDNPYAAFAVHENEQ 82
>gi|170754946|ref|YP_001780228.1| putative ABC transporter, permease protein [Clostridium botulinum
B1 str. Okra]
gi|169120158|gb|ACA43994.1| putative ABC transporter, permease protein [Clostridium botulinum
B1 str. Okra]
Length = 822
Score = 40.5 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 32/260 (12%), Positives = 74/260 (28%), Gaps = 21/260 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M +F VA+ + N+ + + I +M+ I+ S + + + K
Sbjct: 1 MRLF----FKVAFNSIRKNKIRYMLLTCTLILSTIIMLSTS--IIKDSAIKIREDQLRKT 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
L + + P + + I N + I + ++P + G A + + + V
Sbjct: 55 TLNSQLVITTADEKDPFFNPKDIINSIKDIDGISHIVPRIGGMAKDAKTLKDINIIGVDL 114
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
++ + N+ + L I +
Sbjct: 115 NKQKAAFPIELIDKYKVKDKENEIIINEKYAKENSLKVGAKIKLLIGTKNKEFIISGISK 174
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
D +S+ AQ + ++ I + +K+ D I
Sbjct: 175 ---------------NTGVFDPSMNTAMISIDNAQYLLDQKDNAYSIGITIKNLDDINNM 219
Query: 241 HENIVRILGNGVVVIDWQQR 260
E I + + ++
Sbjct: 220 IEKIKPKVSSKFIIQQRYDM 239
>gi|329115749|ref|ZP_08244466.1| efflux ABC transporter, permease protein [Streptococcus parauberis
NCFD 2020]
gi|326906154|gb|EGE53068.1| efflux ABC transporter, permease protein [Streptococcus parauberis
NCFD 2020]
Length = 407
Score = 40.5 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 34/264 (12%), Positives = 79/264 (29%), Gaps = 25/264 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A ++ ++ S ++ +G++IGV A++++M + N ++ + N
Sbjct: 4 WKFALSSIWGHKLR------SLLTMLGIIIGVSAVVIIMGLGNAMKKSVTDSFS--NNER 55
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+Q Y + + L+ + +V + S +
Sbjct: 56 EVQIYYQSKTEEEDPYASLNVQENTQEVKSEWMERIVREVDGVDAYYFTNNTSSTISYGK 115
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ + G + F K I+ + +I ++ G G +
Sbjct: 116 KKMKDTNITGASKDYFKVKKYDIVAGRTLSDTDYKNFSRIILIDTSLSDELFGKGNYKDA 175
Query: 189 YTVLGMFR----------------MRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK 232
+ + + G M+ + FN+ N V I + V
Sbjct: 176 LNKVVSLQDKDYLVVGVYKTKTQSVSVNGMVTGGAVMANTQVASEFNI-NEVGTIYIHVT 234
Query: 233 DPDAIEKTHENIVRILGNGVVVID 256
+ + ++L N V D
Sbjct: 235 NIQKSIDIGHDAAKLLTNLSHVKD 258
>gi|302023488|ref|ZP_07248699.1| permease [Streptococcus suis 05HAS68]
Length = 406
Score = 40.5 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 8/44 (18%), Positives = 25/44 (56%), Gaps = 6/44 (13%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNG 52
A + + +++ S ++ +G++IGV A+++++++ G
Sbjct: 4 WKFALKSIMAHKMR------SLLTMLGIIIGVAAVVIIVAMGTG 41
>gi|288905529|ref|YP_003430751.1| ABC transporter permease protein [Streptococcus gallolyticus
UCN34]
gi|288732255|emb|CBI13822.1| putative ABC transporter permease protein [Streptococcus
gallolyticus UCN34]
Length = 410
Score = 40.5 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A + ++ +F ++ +G++IGV +++V+M++ G + + +
Sbjct: 4 WKFALSSIMGHKMRSF------LTMLGIIIGVASVVVIMALGQGMTKQITDMFSADTRDI 57
Query: 69 VIQQ 72
I
Sbjct: 58 NIYY 61
>gi|325913651|ref|ZP_08176013.1| efflux ABC transporter, permease protein [Lactobacillus iners UPII
60-B]
gi|325477010|gb|EGC80160.1| efflux ABC transporter, permease protein [Lactobacillus iners UPII
60-B]
Length = 813
Score = 40.5 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 29/242 (11%), Positives = 70/242 (28%), Gaps = 19/242 (7%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
F + + R +F + F ++ +G+ L++ + + + +E + I
Sbjct: 436 SFSLKITARNVFRFKSRMF------MTILGIAGCCALLVMGLGIRDSLKEIADTQYGDII 489
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+ +I + + + V + +
Sbjct: 490 KYDLIALHNHQIPQNNSHYQSIINDNYVKRHTYINYKVCHTKQPHKFIDSNIQVITFADT 549
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ R N G II + LA+ + + +GDK+ Y
Sbjct: 550 NVLKKYFDLRNRRNKERYLLNSSGAIINEKLAKIMHVKVGDKLTFKDNYN---------- 599
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+T Y + M+ + Q F + + +K + K +E ++
Sbjct: 600 ---HTKKVTISHICEMYLGHYLLMNRKTYQKVFQTSYTSNADMISLKSHKDLNKFNEKLL 656
Query: 246 RI 247
+
Sbjct: 657 KT 658
>gi|229062624|ref|ZP_04199933.1| ABC transporter, permease component [Bacillus cereus AH603]
gi|228716594|gb|EEL68291.1| ABC transporter, permease component [Bacillus cereus AH603]
Length = 846
Score = 40.5 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 31/224 (13%), Positives = 69/224 (30%), Gaps = 17/224 (7%)
Query: 27 IASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANR 86
+ + + +GVM+ M L+ SV +E ++ R + H+ +
Sbjct: 10 LIALGAALGVMLATMLLLGNQSVEQSVKEQVVSRY--GDYHLQFGYIKNDIYLNNESLKG 67
Query: 87 LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDR 146
+D + + K+ + F G +S + Y +
Sbjct: 68 IDSLENAEKISKALIPYPFPHYKELSGKPSYWGVEQDSPEMHSYKILEGRYPKEGAEVAL 127
Query: 147 GKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGM 206
KG +++ I + K+ V+G+
Sbjct: 128 TKGYTDRENIRVGDTIKLPFP---------------QHGEKAVKVVGILNPPLMASMGHS 172
Query: 207 VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN 250
Y + Q NL N + ++V V+D + + ++ + + N
Sbjct: 173 AYFPIHWLQKELNLPNQFNLVQVKVQDVNVKKAIAFDVHKKIEN 216
>gi|226228878|ref|YP_002762984.1| hypothetical membrane protein [Gemmatimonas aurantiaca T-27]
gi|226092069|dbj|BAH40514.1| hypothetical membrane protein [Gemmatimonas aurantiaca T-27]
Length = 413
Score = 40.5 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 43/100 (43%), Gaps = 12/100 (12%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGF----RED 56
M +F ++A + + +F + +GV IGVM L+ V+S++ G ED
Sbjct: 1 MPLFEAV--LLALGQIRVQKLKSF------FTLLGVTIGVMFLVAVVSIVEGMSKYVEED 52
Query: 57 MIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKV 96
I R +G+N + + + + + + P + K
Sbjct: 53 FIGRFIGVNTFTLRRWPDFSGPETEEEWRDMQRWPLMYKH 92
>gi|225012207|ref|ZP_03702644.1| protein of unknown function DUF214 [Flavobacteria bacterium
MS024-2A]
gi|225003762|gb|EEG41735.1| protein of unknown function DUF214 [Flavobacteria bacterium
MS024-2A]
Length = 409
Score = 40.5 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 41/270 (15%), Positives = 92/270 (34%), Gaps = 13/270 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FSR + + N+ F+S + V +G+ I++ + NG + + L
Sbjct: 1 MFSRDRWQEIFETISKNKLRTFLSGFT------VALGIFIFIILFGLGNGLKNSFQEFFL 54
Query: 63 GINGHVVIQQKYYPLVDYQ-FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ + + Y+ F ANR + + + ++ + +
Sbjct: 55 DDASNAIFLYPGKTSMPYKGFKANRKIEFDNEDLEDIKTNFPLLIEYVTPRITRSGLTRY 114
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ +Y ++ + + + I DL +N ++ ++ + + P+G
Sbjct: 115 KGENNTYTTSAVAPGHQFIEKTIIMKGRYINQSDLDKNAKHAVIGRLVVKDLFKTEDPIG 174
Query: 182 MGIR--SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD---A 236
I S Y V+G+F+ D +Y+ QL + + I V
Sbjct: 175 KYIDIGSSVYKVIGVFQDEGGDRQERYIYIPYTTRQLLEKGNDKIDQIVVTFPKEFGHTG 234
Query: 237 IEKTHENIVRILGNGVVVIDWQQRYQIFFS 266
++ + + ID Q I+F
Sbjct: 235 ALALESSLKKYFKDK-KSIDPQDPNGIYFQ 263
>gi|319745245|gb|EFV97563.1| ABC superfamily ATP binding cassette transporter, membrane
protein [Streptococcus agalactiae ATCC 13813]
Length = 415
Score = 40.5 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A + ++ AF ++ +G++IGV +++++M++ G ++ + + ++
Sbjct: 4 WKFALSSILGHKMRAF------LTMLGIIIGVASVVLIMALGKGMKDSVTNEITKSQKNL 57
Query: 69 VIQQKYYPLVDYQFI 83
I K +
Sbjct: 58 QIYYKTKEDQKNEDN 72
>gi|317402322|gb|EFV82899.1| macrolide export ATP-binding/permease macB [Achromobacter
xylosoxidans C54]
Length = 652
Score = 40.5 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 29/233 (12%), Positives = 73/233 (31%), Gaps = 2/233 (0%)
Query: 26 SIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIAN 85
+ + ++ +G++IG+ A++ V+++ G R+ +++ + I + V D + +
Sbjct: 272 RLRTSLTMLGIIIGIAAVVSVVALGEGSRQKILEDISEIGTNTVEVFPGKDFGDEKALTI 331
Query: 86 RLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFD 145
R D + + +S+ + N + + R
Sbjct: 332 RTLVPADAEALSRESYVDSVTPEVSTSNTLRYRNVAVNGSIQGVGEQYFRVRAVKLAQGK 391
Query: 146 RGKGVIIGKDLARNLGISIGDKINI--LSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYD 203
+ + + K + + ++ V F + +
Sbjct: 392 FFDATSVARRAQEVVIDESTRKTLFGSHTDPIGQVVFLGSMPARVIGVTKKNDTVFGNNE 451
Query: 204 NGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
V++ A + + I V V D + I ++L VV D
Sbjct: 452 TLNVWIPYTTALSRVLGQQHLKSITVRVNDAAPPAAAEQAITKVLLRRHVVKD 504
>gi|225569408|ref|ZP_03778433.1| hypothetical protein CLOHYLEM_05492 [Clostridium hylemonae DSM
15053]
gi|225161616|gb|EEG74235.1| hypothetical protein CLOHYLEM_05492 [Clostridium hylemonae DSM
15053]
Length = 469
Score = 40.5 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 10/45 (22%), Positives = 24/45 (53%), Gaps = 6/45 (13%)
Query: 15 YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
L + F ++ +GV+IG +++V++S+ G ++ + K
Sbjct: 10 NLKRRKLRTF------LTVLGVVIGTASIVVMISLGLGMQQSLYK 48
>gi|126699071|ref|YP_001087968.1| ABC transporter permease [Clostridium difficile 630]
gi|115250508|emb|CAJ68332.1| ABC-type transport system, permease protein [Clostridium difficile]
Length = 853
Score = 40.5 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 23/251 (9%), Positives = 67/251 (26%), Gaps = 7/251 (2%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++++ + RYL N++ ++I I ++ G+ + S M+ + IK
Sbjct: 1 MNLYTSLTI----RYLKQNKRRTIVTIIGIILSTALICGIGN--IFESFMDYQMRETIKN 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + + + + + + + +
Sbjct: 55 DGSFHVTFYDVNRKNVEYVTKSAEIEKHAFTKQLGYSKLENSENAILSIKQYDKNAINGY 114
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + S + IG + +G +
Sbjct: 115 KVSIKEGRFPAKEGEIVLSESIINLIDDKLKIGDKITLKVGDMFDSSKKKIDSMTFHEGD 174
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ + + + ++ N + + + V VK+P + K
Sbjct: 175 YIANEKDRTFKVVGIIEKPGFERYNGIATAIAYFNPMNNYNDTI-NVSVAVKNPKDVYKI 233
Query: 241 HENIVRILGNG 251
I + + +
Sbjct: 234 SNKISKNIYSN 244
>gi|330470306|ref|YP_004408049.1| hypothetical protein VAB18032_01825 [Verrucosispora maris
AB-18-032]
gi|328813277|gb|AEB47449.1| hypothetical protein VAB18032_01825 [Verrucosispora maris
AB-18-032]
Length = 394
Score = 40.5 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 34/243 (13%), Positives = 81/243 (33%), Gaps = 12/243 (4%)
Query: 12 AWR----YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
AWR L +NR S ++ +GV+IGV ++++++++ G ++ + ++V G+ +
Sbjct: 6 AWRVAADALRANRMR------SLLTMLGVIIGVASVVLLVAIGTGTKQTVEQQVEGLGSN 59
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+++ V + L ++SG + +
Sbjct: 60 LLLVVPGRLDVGSAPAVSPLTLQDVDAVGRVVGDPARVAVTVASGATVRAGNRQDFTTVQ 119
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG-MGIRS 186
+ + + + + ++ + G+R
Sbjct: 120 GVLETTPTVFARDLGRGRYLTRSDVDTGRRVAVLGDSVARVLFPDREAVGQQVNVAGVRF 179
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ V + V++ + AQ + + V I V D D I++ + IV
Sbjct: 180 RVIGVFTPLGQSLGVDRDDEVHIPVTAAQRLYGTQ-RVDAIAVRAPDRDRIDELGQRIVT 238
Query: 247 ILG 249
L
Sbjct: 239 ELN 241
>gi|124516743|gb|EAY58251.1| putative ABC transporter, permease protein [Leptospirillum
rubarum]
Length = 402
Score = 40.5 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A+R L N + ++ +G++IG A+I+++S+ G R ++ + + +
Sbjct: 6 LAFRSLARNP------FRTILTMLGIVIGTAAVILLVSLGMGARHLVLDSINNLGPN 56
>gi|153007134|ref|YP_001381459.1| hypothetical protein Anae109_4297 [Anaeromyxobacter sp. Fw109-5]
gi|152030707|gb|ABS28475.1| protein of unknown function DUF214 [Anaeromyxobacter sp. Fw109-5]
Length = 420
Score = 40.5 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 33/79 (41%), Gaps = 6/79 (7%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A L R +F ++ +G++IGVM +I +++++ G ++ + V
Sbjct: 21 IALGNLVGARLRSF------LTTLGMVIGVMTVIAIVAIIQGLNASFESQISTLGAGTVY 74
Query: 71 QQKYYPLVDYQFIANRLDF 89
K+ V + +
Sbjct: 75 VSKFGWFVQGRDEWWEMRN 93
>gi|295110934|emb|CBL27684.1| ABC-type antimicrobial peptide transport system, permease
component [Synergistetes bacterium SGP1]
Length = 404
Score = 40.5 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + A L +N+ S ++ +GV+IGV A+I +++V NG M V
Sbjct: 1 MFET--LRTALSSLLANKTR------SLLTMLGVVIGVGAVIAMVAVGNGASVQMQDLVS 52
Query: 63 GINGH 67
G+ +
Sbjct: 53 GLGSN 57
>gi|260495445|ref|ZP_05815571.1| D-methionine ABC transporter, ATP-binding protein [Fusobacterium
sp. 3_1_33]
gi|260196982|gb|EEW94503.1| D-methionine ABC transporter, ATP-binding protein [Fusobacterium
sp. 3_1_33]
Length = 528
Score = 40.5 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 24/225 (10%), Positives = 75/225 (33%), Gaps = 8/225 (3%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPL-----VDYQFI 83
S ++ +G++IG+ +++ V+++ NG ++ +++ + + + + + + +
Sbjct: 277 SLLTMLGIIIGIASIVCVVAIGNGSQQKVLENISSLGTNTMDIFNGEGMGSRFSNRIKSL 336
Query: 84 ANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSND 143
+ I + + V+ + SG + + Y + +
Sbjct: 337 STTDVDILEKQSYVDSVTPNSTSSGTIVYQNKSFSGNLKGVGADYFDVRGVKITDGRAFS 396
Query: 144 FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYD 203
D + + + N S+ + + K + + + +
Sbjct: 397 KDDEQNLSSVALIDENTQKSLFGENENPIGKVILFNKKPL---KIIGTVELSNVIGLNSS 453
Query: 204 NGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
V+ + E + I V VK+ + ++I +L
Sbjct: 454 ELNVFAPYTMVMNKVSGEKYIGSITVKVKNDIDSQVAQKSITDLL 498
>gi|238752022|ref|ZP_04613506.1| ABC transporter related [Yersinia rohdei ATCC 43380]
gi|238709722|gb|EEQ01956.1| ABC transporter related [Yersinia rohdei ATCC 43380]
Length = 680
Score = 40.5 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 22/225 (9%), Positives = 71/225 (31%), Gaps = 2/225 (0%)
Query: 26 SIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIAN 85
+ + ++ +G++IG+ +++ V+++ G ++ ++ + + + D + A
Sbjct: 300 RLRTLLTMLGIIIGIASVVSVVALGKGSQQQVLANINAMGTSTLEIFPGKDFGDMRSAAI 359
Query: 86 RLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFD 145
D + + +SS + + + + + G N
Sbjct: 360 HTLRASDADALAQQGYIHSVTPAVSSSSTLRYGNQSVSGTVNGVGEQYFLVRGYSLNQGM 419
Query: 146 RGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS--KSYTVLGMFRMRFPDYD 203
+ + + + + + + V + F +
Sbjct: 420 AFNRTSVDNLMQEAVIDENTRNKLFPDGENPIGKVILLGSLPCRVIGVAAKKQSGFGSDE 479
Query: 204 NGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
N V++ A ++ + I V V D + + + ++L
Sbjct: 480 NLNVWIPYTTAMKRMFGQSYLKSITVRVNDDINLANAEQGVTKLL 524
>gi|322435889|ref|YP_004218101.1| protein of unknown function DUF214 [Acidobacterium sp. MP5ACTX9]
gi|321163616|gb|ADW69321.1| protein of unknown function DUF214 [Acidobacterium sp. MP5ACTX9]
Length = 865
Score = 40.5 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 33/270 (12%), Positives = 69/270 (25%), Gaps = 28/270 (10%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
+A R + S+R F + V IGV AL V N FR ++ R I
Sbjct: 7 PTAFRIASREMRSSRGKFF------FVILSVAIGVAALTGVRGFSNSFRTTLLTRARSIM 60
Query: 66 GHVVIQQKYYPLVDYQF-----------IANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
+ + + + + + + +
Sbjct: 61 AADLSARTNQQPTPSEAEGLATIEREGVQMTPVTELLSMASAAKTLDPLLISLKAVDPSA 120
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ S LQ + V++D + IG L + + P
Sbjct: 121 YPYYGTVDLEPTSTLQQVLTPDSVVVADDLLVRLHLQIGDQLKIGNKLFRIASVVTNEPD 180
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
+ G R + + F + +G + D
Sbjct: 181 RLSSQFAAGPRVLISRQGLDASGLLAPGSHAG-------QRFLFKVPAPANGAPI--SDA 231
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIF 264
+ ++++L + D+++
Sbjct: 232 AVAD-LKARLIKLLPES-QITDYRETNPAL 259
>gi|322389929|ref|ZP_08063469.1| ABC superfamily ATP binding cassette transporter, membrane
protein [Streptococcus parasanguinis ATCC 903]
gi|321143365|gb|EFX38803.1| ABC superfamily ATP binding cassette transporter, membrane
protein [Streptococcus parasanguinis ATCC 903]
Length = 449
Score = 40.5 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A + S++ +F ++ +G++IGV +++V+M++ +G + + K +V
Sbjct: 4 WKFAISSIMSHKLRSF------LTMVGIIIGVASVVVIMALGDGMKAGVTKTFTKDQEYV 57
Query: 69 VIQQ 72
I
Sbjct: 58 QISY 61
>gi|312867323|ref|ZP_07727532.1| efflux ABC transporter, permease protein [Streptococcus
parasanguinis F0405]
gi|311097024|gb|EFQ55259.1| efflux ABC transporter, permease protein [Streptococcus
parasanguinis F0405]
Length = 445
Score = 40.5 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A + S++ +F ++ +G++IGV +++V+M++ +G + + K +V
Sbjct: 4 WKFAISSIMSHKLRSF------LTMVGIIIGVASVVVIMALGDGMKAGVTKTFTKDQEYV 57
Query: 69 VIQQ 72
I
Sbjct: 58 QISY 61
>gi|296876141|ref|ZP_06900195.1| ABC superfamily ATP binding cassette transporter, membrane
protein [Streptococcus parasanguinis ATCC 15912]
gi|296432852|gb|EFH18645.1| ABC superfamily ATP binding cassette transporter, membrane
protein [Streptococcus parasanguinis ATCC 15912]
Length = 445
Score = 40.5 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A + S++ +F ++ +G++IGV +++V+M++ +G + + K +V
Sbjct: 4 WKFAISSIMSHKLRSF------LTMVGIIIGVASVVVIMALGDGMKAGVTKTFTKDQEYV 57
Query: 69 VIQQ 72
I
Sbjct: 58 QISY 61
>gi|268680343|ref|YP_003304774.1| hypothetical protein Sdel_1724 [Sulfurospirillum deleyianum DSM
6946]
gi|268618374|gb|ACZ12739.1| protein of unknown function DUF214 [Sulfurospirillum deleyianum DSM
6946]
Length = 406
Score = 40.5 bits (92), Expect = 0.26, Method: Composition-based stats.
Identities = 30/263 (11%), Positives = 87/263 (33%), Gaps = 19/263 (7%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + + AWR + +NR + ++ +G++IGV A+I++ +V G + + +
Sbjct: 3 MLMLNE-----AWRAMNANRLR------TLLTMLGMVIGVGAVIIMSAVGAGTQIKVQEA 51
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + ++ I I + + + + +
Sbjct: 52 IDSMGSNLFIVLAGSTTSGGVRIGSGGVQTLTIADATAMEELEGISATAPMSTGSAQLIY 111
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGK-----DLARNLGISIGDKINILSPYG 175
S++ F+ + + F+ + ++G + + + + +P G
Sbjct: 112 QSSNWFTQVTGTNPAFFQVRDWEIEQGYPFMDSDVRGSTRVVVLGQTIVQNLFGDENPIG 171
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQ-LYFN--LENAVSGIEVFVK 232
+ + + + + + AQ F + +V I V
Sbjct: 172 KTIRIKNSPYLVVGVLSKKGQSLDGRDQDDTAIIPITTAQTKLFGNQFKGSVRFIMVEAT 231
Query: 233 DPDAIEKTHENIVRILGNGVVVI 255
+ +++ + +V++L +
Sbjct: 232 TKEVMDQVEKEMVQLLRQRHKLR 254
>gi|328955679|ref|YP_004373012.1| protein of unknown function DUF214 [Coriobacterium glomerans PW2]
gi|328456003|gb|AEB07197.1| protein of unknown function DUF214 [Coriobacterium glomerans PW2]
Length = 410
Score = 40.5 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ A R L +NR S ++ G++IG+ A+I + S++ G R M+
Sbjct: 1 MTMHDLISS--ALRALGANRGR------SLLTISGIVIGITAVIAMTSLIGGVRNYMMGS 52
>gi|189423465|ref|YP_001950642.1| ABC transporter [Geobacter lovleyi SZ]
gi|189419724|gb|ACD94122.1| ABC transporter related [Geobacter lovleyi SZ]
Length = 652
Score = 40.5 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 30/242 (12%), Positives = 79/242 (32%), Gaps = 7/242 (2%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + S+R + ++ +G++IG+ +++ V+++ G ++ +IK + + +
Sbjct: 262 AFKMALIAMLSHRMR------TLLTMLGIIIGITSVVSVVALGQGAQQKVIKDISAMGTN 315
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
V+ D + D+ + V + +N+ +
Sbjct: 316 VIDVNPGKDWGDEDAAGIQTLVQSDLEALKAQVYVDSASPTTGGSQLLRYRNLTANASVN 375
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ + R G D + + + K + + +G
Sbjct: 376 GVGEQYFRVKGYEIADGIAFSAADVKQQAQVVVIDQNTRKKFFSNQDPIGMILFVGSLPC 435
Query: 188 SYTVLGMFRMRFPDYDNG-MVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ + + V++ A + S I V VKD + ++I R
Sbjct: 436 RVIGITKVKDGPMGNSSNLEVWIPYTAAMNRLLGQQYFSSITVRVKDGISNPVAEQSITR 495
Query: 247 IL 248
++
Sbjct: 496 LV 497
>gi|119357469|ref|YP_912113.1| hypothetical protein Cpha266_1668 [Chlorobium phaeobacteroides DSM
266]
gi|119354818|gb|ABL65689.1| protein of unknown function DUF214 [Chlorobium phaeobacteroides DSM
266]
Length = 421
Score = 40.5 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 34/251 (13%), Positives = 73/251 (29%), Gaps = 20/251 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A + SN+ +F ++ +GV+IG++A+ ++ + +NG K + +
Sbjct: 15 SLNIAVFQIKSNKFRSF------LTALGVIIGIVAITMMGTAINGIDTGFEKSLAMLGYD 68
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
VV QK Q+ R A + + S
Sbjct: 69 VVYVQKSSWSTMGQWWRYRNRPDLKTDYATQINRIIADNPDSELEIAVPQMSTYQASAKY 128
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINI-------------LSPY 174
+ S F ++D+ + + S G + +
Sbjct: 129 REKILESIFSLGTTHDYLLTASGDLAQGRFFTPQESAGGNMVCVIGDDIATGLFPQENAL 188
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
G + G + + M L + + V+ I V +++
Sbjct: 189 GKTIQIKNGKFRIIGIFKKQGKFLGLFSFDNQAIMPLAAFEKVYGRNMFVT-IRVKIRNQ 247
Query: 235 DAIEKTHENIV 245
I E +
Sbjct: 248 TRIAAAEEELR 258
>gi|330718338|ref|ZP_08312938.1| peptide ABC transporter ATPase [Leuconostoc fallax KCTC 3537]
Length = 661
Score = 40.5 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 13/110 (11%), Positives = 36/110 (32%), Gaps = 6/110 (5%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A+ +L N+ F + +G IG+ ++I+ + + NG + + +V +
Sbjct: 250 WQMAFDHLRFNKLRNF------LITLGSAIGIFSVILFLGLGNGIKGYINDQVTQLANPN 303
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
D A++ + + + + +
Sbjct: 304 YPTVMRNVTEDKDAPASQRMQETSQAMATDYNAATLPDNYIDRLQKVNHI 353
>gi|319946597|ref|ZP_08020831.1| antimicrobial peptide ABC superfamily ATP binding cassette
transporter permease [Streptococcus australis ATCC
700641]
gi|319746645|gb|EFV98904.1| antimicrobial peptide ABC superfamily ATP binding cassette
transporter permease [Streptococcus australis ATCC
700641]
Length = 450
Score = 40.5 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A + ++ +F ++ +G++IGV +++V+M++ +G + + K +V
Sbjct: 4 WKFAISSILGHKMRSF------LTMVGIIIGVASVVVIMALGDGMKAGVTKTFTKDQQYV 57
Query: 69 VIQQ 72
I
Sbjct: 58 QISY 61
>gi|206603654|gb|EDZ40134.1| Putative ABC transporter, permease protein [Leptospirillum sp.
Group II '5-way CG']
Length = 402
Score = 40.5 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A+R L N + ++ +G++IG A+I+++S+ G R ++ + + +
Sbjct: 6 LAFRSLARNP------FRTILTMLGIVIGTAAVILLVSLGMGARHLVLDSINNLGPN 56
>gi|318606617|emb|CBY28115.1| macrolide export ATP-binding/permease protein MacB [Yersinia
enterocolitica subsp. palearctica Y11]
Length = 389
Score = 40.1 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 21/235 (8%), Positives = 72/235 (30%), Gaps = 2/235 (0%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
+ ++ +G++IG+ +++ V+++ G ++ ++ + + + D + A
Sbjct: 13 TLLTMLGIIIGIASVVSVVALGKGSQQQVLANINSMGTSTLEIFPGKDFGDMRSAAIHTL 72
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
D + + +S+ + + + + + G
Sbjct: 73 RATDADALAQQGYIHSVTPTVSTSTTLRYGNKSVSGTVNGVGEQYFLVRGYTLAQGMAFN 132
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS--KSYTVLGMFRMRFPDYDNGM 206
+ + + + + + + + V + F +N
Sbjct: 133 HTSVDNLMQEAVIDENTRDKLFPNGENPLGKVILLGSLPCRVIGVAAKKQSGFGSDENLN 192
Query: 207 VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRY 261
V++ A ++ + I V V D + + + ++L D+
Sbjct: 193 VWIPYTTAMKRMLGQSYLKSITVRVNDDIDLANAEQGVTKLLTQRHGTQDFFVMN 247
>gi|295397712|ref|ZP_06807784.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Aerococcus viridans ATCC 11563]
gi|294974041|gb|EFG49796.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Aerococcus viridans ATCC 11563]
Length = 778
Score = 40.1 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+ + ++++ + + + FI+ SF S IG++ ++ VV+S+ NGF++ +
Sbjct: 241 MSYLTALNLSFKNIMTKKGRTFIT--SFASSIGII----SIAVVLSLSNGFQKQIDSTQ 293
>gi|119896348|ref|YP_931561.1| hypothetical protein azo0056 [Azoarcus sp. BH72]
gi|119668761|emb|CAL92674.1| conserved hypothetical membrane protein [Azoarcus sp. BH72]
Length = 465
Score = 40.1 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Query: 9 VIVAWRYLFSNRKNAFISI--ASFISFIGVMIG--VMALI 44
+ +AWR + NR+ + I++ + + VM+G V A I
Sbjct: 4 LFLAWRNVLRNRRRSAITLATIAVAAMAVVMLGGYVAATI 43
>gi|54298922|ref|YP_125291.1| hypothetical protein lpp2989 [Legionella pneumophila str. Paris]
gi|53752707|emb|CAH14142.1| hypothetical protein lpp2989 [Legionella pneumophila str. Paris]
Length = 397
Score = 40.1 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 22/243 (9%), Positives = 71/243 (29%), Gaps = 9/243 (3%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A L +++ S ++ +G+++G A++ ++S E +++ + ++
Sbjct: 10 ALVNLTASKLR------SLLAVLGILVGTAAVVALISCGQLATEKALEQFKALGTDLLAV 63
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS---DFSY 128
Y + + I ++ + ++ S+ + G +
Sbjct: 64 SVYQKVPSKSHSESDSLTIDQWQQIAERIPYVLRIAPYSTAYQTLSFNGKVMQGAVIGAD 123
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ F + + + + P G +G + +
Sbjct: 124 ESLADIIHVTLAQGHFVSFLDSFEHFCVIGHSLAQQIKETTLDDPIGKQLRIGQSLYTII 183
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
F + D + + + ++ + +K I++ I I+
Sbjct: 184 GVAERWKENGFFNEDINQAVIIPLAGMSLVSKDAKINNAVLLLKPDSPIDEVINEIKEII 243
Query: 249 GNG 251
+
Sbjct: 244 NSQ 246
>gi|315638264|ref|ZP_07893445.1| macrolide-specific efflux protein MacB [Campylobacter upsaliensis
JV21]
gi|315481611|gb|EFU72234.1| macrolide-specific efflux protein MacB [Campylobacter upsaliensis
JV21]
Length = 641
Score = 40.1 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 27/243 (11%), Positives = 72/243 (29%), Gaps = 9/243 (3%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A+ + +++ S ++ +G++IG+ +++ V+++ G + +++ + +
Sbjct: 250 FKIAYSSIIAHKLR------SLLTMLGIIIGIASVVCVVALGLGSQAKVLQTTSSLGTNT 303
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF-- 126
+ + D + RL+F S +SG + ++
Sbjct: 304 IEIRPGRGFGDLRSGRTRLNFSDLETLRSLEYLEAVEASEGTSGVLTYTNKSLNARAEGV 363
Query: 127 -SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
N ++ + +
Sbjct: 364 GVNSFNMDGLKLEVGRILDEKDLSESANVAVLDFNAKKNIFPSVKSEELLGKIVIFNSTP 423
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
K +L R + +Y+ + + I V VKD + I+
Sbjct: 424 FKIIGILQKDTRRPISDNIVRLYIPYTTLMNKLTGDRKLREIIVKVKDNVSSSLAENAII 483
Query: 246 RIL 248
R+L
Sbjct: 484 RVL 486
>gi|20807653|ref|NP_622824.1| ABC-type transport systems, involved in lipoprotein release,
permease components [Thermoanaerobacter tengcongensis
MB4]
gi|20516198|gb|AAM24428.1| ABC-type transport systems, involved in lipoprotein release,
permease components [Thermoanaerobacter tengcongensis
MB4]
Length = 405
Score = 40.1 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 42/259 (16%), Positives = 91/259 (35%), Gaps = 16/259 (6%)
Query: 1 MSIFSRFE-VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
M I +E VA + SN+ F ++ +G++IG+ ++I ++S+ G ++ ++
Sbjct: 1 MRIMYIWEAFKVAIESILSNKLRTF------LTMLGIIIGIASVITIVSLGAGGQKAILG 54
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
I +V + + + L + + K LP V A V+
Sbjct: 55 EFEKIGVNVFSIKMRNDVDIREGDRLTLRDVEMIRKRLPSVKYAAPVAEKMGLAKTEKYT 114
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + + F K +++G+++ S + G
Sbjct: 115 KRALFIGTDFDYGNISSLKVIHGRFLNEKDILLGRNVILIDKDSAIELFGYEDCVGKSIK 174
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMV--------YMSLQEAQLYFNLENAVSGIEVFV 231
+G + ++G+ G + + + AQ F N +S I V
Sbjct: 175 IGTYYYFDTAKIIGVIDSGNLKSLGGSIADQIPIIAAIPITYAQKIFPDIN-ISQIYVMT 233
Query: 232 KDPDAIEKTHENIVRILGN 250
D +E+ VR++ +
Sbjct: 234 YDQSQLEEASSQAVRLIES 252
>gi|312877893|ref|ZP_07737838.1| protein of unknown function DUF214 [Caldicellulosiruptor
lactoaceticus 6A]
gi|311795319|gb|EFR11703.1| protein of unknown function DUF214 [Caldicellulosiruptor
lactoaceticus 6A]
Length = 402
Score = 40.1 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 30/253 (11%), Positives = 77/253 (30%), Gaps = 13/253 (5%)
Query: 1 MSIFSRFE-VIVAWRYLFSNRKNAFISIASFISFIGVMIG----VMALIVVMSVMNGFRE 55
M +E + +A + L+ N+ F +S +GV+IG V A+ +V +V + F +
Sbjct: 1 MQFIRVYEILKMAIKSLYENKVRTF------LSVLGVVIGTSSIVAAVGLVQTVSSSFTK 54
Query: 56 DMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSG 115
+ + + Q Y Y+ + + V+ V P S V +
Sbjct: 55 QVKESGADSLILFLSYQPGYQTDYYELLKYLMKQKDLVLTVTPKKSLSLEVLSSDNNKKK 114
Query: 116 VLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYG 175
+ + + + + + G + D + + +L
Sbjct: 115 CEILLVRPNYY--ITENLQLVDGRFLSYLDEDRNTKVAVVFDDQKDKLFEKGQQVLGKKL 172
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD 235
+ + + + + + + + F + + + +
Sbjct: 173 WIKGYEFEVVGVVKKKERLADISIGSASDISILVPFNVGESLFGSDVSSQQFFIKCVSSE 232
Query: 236 AIEKTHENIVRIL 248
++ + I L
Sbjct: 233 KNKEVQKIIEEFL 245
>gi|325263931|ref|ZP_08130664.1| macrolide export ATP-binding/permease protein MacB [Clostridium sp.
D5]
gi|324030969|gb|EGB92251.1| macrolide export ATP-binding/permease protein MacB [Clostridium sp.
D5]
Length = 390
Score = 40.1 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 31/247 (12%), Positives = 68/247 (27%), Gaps = 14/247 (5%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMI-KRVLGING 66
+A + SN+ +F ++ +G++IGV +L+V++S++NG + N
Sbjct: 5 SFKMACSAILSNKMRSF------LTMLGIIIGVTSLVVLVSLVNGAVASVNEDISSAGNS 58
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
+ + IK + V ++ + V + G + F
Sbjct: 59 KMTVTINNNKGKPLTLDEVLAMGQESEIKEIAPVGEESGTAKSDKTSGDVSITGTTPGYF 118
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ + + D D + + G+
Sbjct: 119 KIQKLNLASGRILKKADVDSSSYTAVINHYMAQQLFGTENVTGRTVIIAGRQYKIAGVLQ 178
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
K+ + D Y+ V+ V + A++ I
Sbjct: 179 KNKDNGW-------NMDRMEAYVPYSTLMRSSETVKYVNSFVVLADNEKAMKAVESKITD 231
Query: 247 ILGNGVV 253
L
Sbjct: 232 KLLERFQ 238
>gi|149279009|ref|ZP_01885143.1| ABC transporter, permease protein [Pedobacter sp. BAL39]
gi|149230288|gb|EDM35673.1| ABC transporter, permease protein [Pedobacter sp. BAL39]
Length = 406
Score = 40.1 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKY 74
L N+ + ++ +G++IGV ++I +MS+ G ++ + + + + +++ Y
Sbjct: 14 LQRNKLR------ALLTMLGIIIGVASVITMMSIGEGSKQSINESLSSMGSNMITIMPY 66
>gi|225873607|ref|YP_002755066.1| efflux ABC transporter, macrolide exporter (MacB) family, permease
protein [Acidobacterium capsulatum ATCC 51196]
gi|225793997|gb|ACO34087.1| efflux ABC transporter, macrolide exporter (MacB) family, permease
protein [Acidobacterium capsulatum ATCC 51196]
Length = 409
Score = 40.1 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 42/103 (40%), Gaps = 6/103 (5%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ ++ + L++N+ + ++ IGV+IGV ++I V+++ NG + + +V G +
Sbjct: 6 ALKISLQSLWANKMR------TVLTLIGVIIGVSSVITVITLTNGVNKYVATKVYGYGAN 59
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLS 110
V K ++ + D Q +
Sbjct: 60 VFTVGKEPQVILSYAEYLKYQKRKDFTMADYEAVQQLCHACKQ 102
>gi|312792293|ref|YP_004025216.1| hypothetical protein Calkr_0013 [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179433|gb|ADQ39603.1| protein of unknown function DUF214 [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 402
Score = 40.1 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 30/253 (11%), Positives = 77/253 (30%), Gaps = 13/253 (5%)
Query: 1 MSIFSRFE-VIVAWRYLFSNRKNAFISIASFISFIGVMIG----VMALIVVMSVMNGFRE 55
M +E + +A + L+ N+ F +S +GV+IG V A+ +V +V + F +
Sbjct: 1 MQFIRVYEILKMAIKSLYENKVRTF------LSVLGVVIGTSSIVAAVGLVQTVSSSFTK 54
Query: 56 DMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSG 115
+ + + Q Y Y+ + + V+ V P S V +
Sbjct: 55 QVKESGADSLILFLSYQPGYQTDYYELLKYLMKQKDLVLTVTPKKSLSLEVLSSDNNKKK 114
Query: 116 VLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYG 175
+ + + + + + G + D + + +L
Sbjct: 115 CEILLVRPNYY--ITENLQLVDGRFLSYLDEDRNTKVAVVFDDQKDKLFEKGQQVLGKKL 172
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD 235
+ + + + + + + + F + + + +
Sbjct: 173 WIKGYEFEVVGVVKKKERLADISIGSASDISILVPFNVGESLFGSDVSSQQFFIKCVSSE 232
Query: 236 AIEKTHENIVRIL 248
++ + I L
Sbjct: 233 KNKEVQKIIEEFL 245
>gi|325660715|ref|ZP_08149344.1| hypothetical protein HMPREF0490_00076 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325473022|gb|EGC76231.1| hypothetical protein HMPREF0490_00076 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 469
Score = 40.1 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 25/46 (54%), Gaps = 6/46 (13%)
Query: 15 YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
L + F ++ +GV+IG +++V++S+ G ++ M K+
Sbjct: 5 NLKRRKLRTF------LTVLGVVIGTASIVVMISLGLGMQKSMYKQ 44
>gi|229825811|ref|ZP_04451880.1| hypothetical protein GCWU000182_01174 [Abiotrophia defectiva ATCC
49176]
gi|229789979|gb|EEP26093.1| hypothetical protein GCWU000182_01174 [Abiotrophia defectiva ATCC
49176]
Length = 450
Score = 40.1 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 11/82 (13%), Positives = 33/82 (40%), Gaps = 14/82 (17%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + R L + + ++ +G++IG ++++V++S+ G + +
Sbjct: 7 MKM--------GLRNLGRRKAR------TALTVVGIVIGTISIVVMISIGIGMNQSFREN 52
Query: 61 VLGINGHVVIQQKYYPLVDYQF 82
++ VI + + +
Sbjct: 53 LMQYGSFTVINMEKNQIDFDEK 74
>gi|222529562|ref|YP_002573444.1| hypothetical protein Athe_1575 [Caldicellulosiruptor bescii DSM
6725]
gi|222456409|gb|ACM60671.1| protein of unknown function DUF214 [Caldicellulosiruptor bescii DSM
6725]
Length = 402
Score = 40.1 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 30/253 (11%), Positives = 77/253 (30%), Gaps = 13/253 (5%)
Query: 1 MSIFSRFE-VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALI----VVMSVMNGFRE 55
M +E + +A + L+ NR F +S +GV+IG ++I +V +V + F +
Sbjct: 1 MQFIKVYEILKMAIKSLYENRVRTF------LSVLGVVIGTSSIIAAVGLVQTVSSSFAK 54
Query: 56 DMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSG 115
+ + + + + Y+ V+ + P S V +
Sbjct: 55 QVKESGVDSLVLFLSYLPEHQNDYYELSEYLWKHKDLVLTITPKKSLSFEVLSSDNNKKR 114
Query: 116 VLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYG 175
+ + + + + S G + D + + G +L
Sbjct: 115 CEILLVKPNYY--ITESLQLVEGRFLSYLDEDRNNKVAVVFDDQKDKLFGKGQQVLGKKL 172
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD 235
+ + + + + + + + F+ E + + +
Sbjct: 173 WIKGNEFEVVGVVKKKQRLANISIGSASDISILVPFNVGESLFSSEISSQQFFIKCVSSE 232
Query: 236 AIEKTHENIVRIL 248
++ + I L
Sbjct: 233 KNKEVQKIIEEFL 245
>gi|167759891|ref|ZP_02432018.1| hypothetical protein CLOSCI_02254 [Clostridium scindens ATCC
35704]
gi|167662510|gb|EDS06640.1| hypothetical protein CLOSCI_02254 [Clostridium scindens ATCC
35704]
Length = 470
Score = 40.1 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 9/45 (20%), Positives = 24/45 (53%), Gaps = 6/45 (13%)
Query: 15 YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
L + F ++ +GV+IG +++V++S+ G ++ + +
Sbjct: 13 NLKRRKLRTF------LTVLGVVIGTASIVVMISLGLGMQQSLYR 51
>gi|108760958|ref|YP_632347.1| putative ABC transporter permease [Myxococcus xanthus DK 1622]
gi|108464838|gb|ABF90023.1| putative ABC transporter, permease protein [Myxococcus xanthus DK
1622]
Length = 410
Score = 40.1 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 24/47 (51%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
S ++ +G++IGV +I +M ++ G R + + + H K+
Sbjct: 22 SLLTLLGIVIGVATVITMMGLIEGLRVKVNNDLGRMGAHTFQVTKWP 68
>gi|307594537|ref|YP_003900854.1| hypothetical protein Vdis_0402 [Vulcanisaeta distributa DSM 14429]
gi|307549738|gb|ADN49803.1| protein of unknown function DUF214 [Vulcanisaeta distributa DSM
14429]
Length = 414
Score = 40.1 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 23/244 (9%), Positives = 55/244 (22%), Gaps = 12/244 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISF---IGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
+AW + R +I I +G+ IG + G++ +
Sbjct: 7 FKLAWSAAWERRGRTIGAIVGIIIAIVALGLAIG---------MGQGYKVLTTSFFERVF 57
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
G + + + ++ + G + +
Sbjct: 58 GTNTVFLFPGQNSQLTLTDVYEVMNIPHVTNAIPILSTVARVNINGHEVTATIIGATEQE 117
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
L S ++ G+ +
Sbjct: 118 IMQLYGVTSLSNAILAGAPVLSPGLALVGYNIAFTSTGQQIAYPGQVMVITTPGGSEITY 177
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ + N +++ F+ V GI V+V P+ I + +
Sbjct: 178 TVGAIMQQSGIGVIGLNPNNAIFIDENTFLSQFDPSGTVDGIIVYVDSPNNINYVTDELK 237
Query: 246 RILG 249
+
Sbjct: 238 AMFP 241
>gi|257456769|ref|ZP_05621953.1| macrolide export ATP-binding/permease protein MacB 2 [Treponema
vincentii ATCC 35580]
gi|257445775|gb|EEV20834.1| macrolide export ATP-binding/permease protein MacB 2 [Treponema
vincentii ATCC 35580]
Length = 407
Score = 40.1 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 36/251 (14%), Positives = 83/251 (33%), Gaps = 18/251 (7%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFR-------EDMIKRVLGI 64
A + N+ + +S +G+MIGV ++++ M++ + +D+ +L +
Sbjct: 8 ALQNFRHNKTR------TLLSLLGIMIGVSSVVITMNLSSSLEASVALVFKDLSSSILTV 61
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H + Y + + + V+ LS+G
Sbjct: 62 MPHSRRNRPLTMNQQYADVLQEKIPEIKQVFFMDGVNATVMRGSLSAGTKECQGVDYGYF 121
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + + + + + VIIG+D+A+ L +S + +
Sbjct: 122 EANKWELEYGEPFSISDF-MTGARKVIIGEDIAKGLFPEGNAVGKTVSLSINNGDSAPLL 180
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVS--GIEVF--VKDPDAIEKT 240
+ + + + + F + + +N S +EV+ V D A+E
Sbjct: 181 FTCTVSGVLKTKNSFFGQIQQYIILPRAFLVRQLGHKNEGSRMAVEVYETVTDFTAVETA 240
Query: 241 HENIVRILGNG 251
E + N
Sbjct: 241 IEEVSAEFANN 251
>gi|225378423|ref|ZP_03755644.1| hypothetical protein ROSEINA2194_04091 [Roseburia inulinivorans DSM
16841]
gi|225209646|gb|EEG92000.1| hypothetical protein ROSEINA2194_04091 [Roseburia inulinivorans DSM
16841]
Length = 440
Score = 40.1 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 72/270 (26%), Gaps = 35/270 (12%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A +FSN+ S ++ +G++IG+ A+I + ++ N + + + + G+ V
Sbjct: 9 AITSIFSNKMR------SILTMLGIIIGISAVITITTIGNSIQTTLTSTLNSLGGNTVQA 62
Query: 72 QKYYPLVDYQFIANRL----------------------DFIPDVIKVLPFVSGQAFVSGL 109
+ + G +
Sbjct: 63 YVDARYPEDDADWDTWEYPEMKTSDFVTQEMIDELVEKYPDEFDGIAASEFLGNGQIRQD 122
Query: 110 SSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN 169
+ + V V+G ++ Y++ D K V I D + I
Sbjct: 123 KNTYANVSVQGTTSEYIDYMKLKMYAGRNLTKQDNKTKKNVCIVADTMAKQYFGDENPIG 182
Query: 170 ILSPYGDV------TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-N 222
Y D + + + +++ +Q + +
Sbjct: 183 EQITYADSDGNLYNFTIVGIYEYNAALFGKVDTSVPEKDRYTTMFIPIQTCFKLMGKDQS 242
Query: 223 AVSGIEVFVKDPDAIEKTHENIVRILGNGV 252
+ + V I++ ++
Sbjct: 243 GYTNFNLMVNSLADIDQATTDVTNFFEEKY 272
>gi|196228338|ref|ZP_03127205.1| protein of unknown function DUF214 [Chthoniobacter flavus Ellin428]
gi|196227741|gb|EDY22244.1| protein of unknown function DUF214 [Chthoniobacter flavus Ellin428]
Length = 371
Score = 40.1 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 33/245 (13%), Positives = 78/245 (31%), Gaps = 28/245 (11%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ + R L + ++ IG+ IG+ A++ ++ + GF+ + +
Sbjct: 4 LSIVSRGLMRRPVR------TGLTMIGIAIGIAAVVALVGMSRGFQTSWTNGLKTRGTDI 57
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
V+ L F A + D I + V + + +S +
Sbjct: 58 VVSNMGSALTPKPFAATQADKIKSLPHVAAI----CTLMVDLISVEKADMMIVSARQWGG 113
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ ++ K V++G+ A L +GD + + +
Sbjct: 114 FSWGNLKIVSGRLPKDEKEKAVVLGQTAADVLKKKVGDTLQLETDELQ------------ 161
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP---DAIEKTHENIV 245
+ +NG V +SL Q + ++ I++ + + + E I
Sbjct: 162 ---VVGIVDGGAIVENGSVILSLSLYQEITGNDGKINVIDLRMTPGTTKEEAAELTERIN 218
Query: 246 RILGN 250
++
Sbjct: 219 SLVPE 223
>gi|158137915|gb|ABW17379.1| MacB [Pseudomonas putida]
Length = 667
Score = 40.1 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 33/271 (12%), Positives = 93/271 (34%), Gaps = 13/271 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F +AW L S+R + ++ +G++IG+ +++ + ++ G + ++K +
Sbjct: 272 MFRE-AFKMAWIALISHRMR------TLLTMLGIVIGITSVVSISAIGEGAKGYVLKDIQ 324
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
I + + D + +P + L + + + + V R +
Sbjct: 325 AIGSNTIDIYSGSNFGDSRA-KTIETLVPADVTALNALYYVDSATPVIGQSTLVRYRNLD 383
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ N+ + A+ + I + + P+ D +
Sbjct: 384 VDVQLNGVSEHYFQVRNIPLAAGIVFSADDARRQAQVVVIDHNTRKRLFGPHVDPLGQVI 443
Query: 183 GIRSKSYTVLGMFRMRFPDYDNG---MVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+ + TV+G+ + +++ + A + + I V +KD ++
Sbjct: 444 LVGNLPCTVIGVTAENKNLFVASNQLNIWVPYETAAGRVLGQRHLDSISVRIKDGVPSKR 503
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYES 270
E + +++ D+ S ++
Sbjct: 504 VEEEVTKLMLQRHGTKDFFTNN--LDSIMQT 532
>gi|226314434|ref|YP_002774330.1| ABC transporter permease protein [Brevibacillus brevis NBRC
100599]
gi|226097384|dbj|BAH45826.1| putative ABC transporter permease protein [Brevibacillus brevis
NBRC 100599]
Length = 865
Score = 40.1 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+ RY+ N+ ++I GV+I V L V S+ + F + M + + +G
Sbjct: 7 LTLRYMKKNKSRTLVTII------GVVISVAMLTAVFSISSSFMDMMQRNAITYSGKWQ 59
>gi|300864877|ref|ZP_07109724.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300337119|emb|CBN54874.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 405
Score = 40.1 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 36/268 (13%), Positives = 89/268 (33%), Gaps = 28/268 (10%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
L +N+ S ++ +G++IG ++I ++ + G ++ + ++V + +++
Sbjct: 14 LMANKLR------SSLTMLGIIIGNASVIAMIGIGEGAQKYVSEQVNSLGPNLLFVIPGS 67
Query: 76 PLVDYQFIANRL-----------DFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
P + + L +P V +V P ++ V+ S+ S ++
Sbjct: 68 PDAQRRPVVPPLTLVLADAEAIAQQVPSVEEVAPTLNDSQLVTYRSNNASSSIIGTTPQF 127
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + + + V +G ++A+ L + + + + +
Sbjct: 128 LSVRSFDVAKGRFITDLDLKRQENVVALGSEIAQRLFGDVQPIGQYVRIKNNTFQVIGVM 187
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ K T M M+ + V+ I V VKD ++ I
Sbjct: 188 QPKGSTFGDNQDMNVFVPLTT---MANRIVGRSSPYGIRVTFISVSVKDETQMKAAQFQI 244
Query: 245 VRIL--------GNGVVVIDWQQRYQIF 264
+L + V + Q
Sbjct: 245 ENLLRLRHKITKDDDFTVRNQQDLQNTL 272
>gi|227534266|ref|ZP_03964315.1| ABC superfamily ATP binding cassette transporter, membrane
protein [Lactobacillus paracasei subsp. paracasei ATCC
25302]
gi|227188096|gb|EEI68163.1| ABC superfamily ATP binding cassette transporter, membrane
protein [Lactobacillus paracasei subsp. paracasei ATCC
25302]
Length = 389
Score = 40.1 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 6/44 (13%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFRE 55
AW+ L +N K S ++ IG++IG+ ++I ++S+ NG +
Sbjct: 10 AWQSLIANPKR------SLLTVIGIVIGIASVITIISLGNGVEQ 47
>gi|222528158|ref|YP_002572040.1| hypothetical protein Athe_0109 [Caldicellulosiruptor bescii DSM
6725]
gi|222455005|gb|ACM59267.1| protein of unknown function DUF214 [Caldicellulosiruptor bescii DSM
6725]
Length = 419
Score = 40.1 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 33/297 (11%), Positives = 84/297 (28%), Gaps = 39/297 (13%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK- 59
M +IV + + +++ G+ IG + L VV+S+ F++ ++K
Sbjct: 1 MKFSDILSLIVT--NIKRRKLRTALTVM------GIFIGSLGLFVVVSISTSFKDYIVKG 52
Query: 60 ---------RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLS 110
+ N + + + +L+ + V V+PF +
Sbjct: 53 ISSLGNADVIYVMPNTNAGYTLEKLKTEIHDKDIKKLEKLRHVKFVIPFYFTNGNLKFKK 112
Query: 111 SGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK--- 167
G+ LV F RF + + I + G +
Sbjct: 113 FEGTVTLVATSVKEFSKKYTLQFGRFPKDDNESGCILGYGIAKLIANPSKGGFADENEVK 172
Query: 168 ---INILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLY------- 217
+ +K ++ + + + + ++
Sbjct: 173 KLVNKAIKIESKRINQAGEEETKEFSFKIRGIAKSDFNFDSSIILPMKAMDKIEDWRYSQ 232
Query: 218 --FNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQI---FFSCYE 269
F + + + V P I + + + R +++ ++ F + +
Sbjct: 233 QDFIKKTGYTYTFLVVDSPSHIPEVEKFLER---EKYYYTSIKEQQEVIEKFLNAVK 286
>gi|238798944|ref|ZP_04642408.1| ABC transporter related [Yersinia mollaretii ATCC 43969]
gi|238717214|gb|EEQ09066.1| ABC transporter related [Yersinia mollaretii ATCC 43969]
Length = 664
Score = 40.1 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 21/238 (8%), Positives = 74/238 (31%), Gaps = 2/238 (0%)
Query: 26 SIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIAN 85
+ + ++ +G++IG+ +++ V+++ G ++ ++ + + + D + A
Sbjct: 285 RLRTLLTMLGIIIGIASVVSVVALGKGSQQQVLANINAMGTSTLEIFPGKDFGDMRSAAI 344
Query: 86 RLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFD 145
+ D + + +S+ + + + + + G
Sbjct: 345 QTLRATDADALAKQGYIHSVTPAVSTSTTLRYGNKSVSGTVNGVGEQYFMVRGYSIAQGM 404
Query: 146 RGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS--KSYTVLGMFRMRFPDYD 203
+ + + + + + + + V + F +
Sbjct: 405 AFTRASVDGLMQEAVIDENTRDKLFPNGEKPLGKVVLLGSLPCRVIGVAAKKQSGFGSDE 464
Query: 204 NGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRY 261
N V++ A ++ + I V V D + + + ++L D+
Sbjct: 465 NLNVWIPYTTAMSRMLGQSYLRSITVRVNDDIDLANAEQGVTKLLTQRHGTQDFFVMN 522
>gi|189347426|ref|YP_001943955.1| ABC transporter [Chlorobium limicola DSM 245]
gi|189341573|gb|ACD90976.1| ABC transporter related [Chlorobium limicola DSM 245]
Length = 657
Score = 40.1 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 36/64 (56%), Gaps = 8/64 (12%)
Query: 6 RFEVIVA--WRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
RF V +A ++ + SN+ S +S +G+++GV ++I +M++ G + M +++
Sbjct: 256 RFSVFMAQAFQSILSNKVR------SLLSVLGILVGVASVIAMMALGEGAKAAMQQQLKS 309
Query: 64 INGH 67
+ +
Sbjct: 310 MGSN 313
>gi|166031675|ref|ZP_02234504.1| hypothetical protein DORFOR_01375 [Dorea formicigenerans ATCC
27755]
gi|166028652|gb|EDR47409.1| hypothetical protein DORFOR_01375 [Dorea formicigenerans ATCC
27755]
Length = 464
Score = 40.1 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 9/47 (19%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Query: 15 YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
L + F ++ +GV+IG +++V++S+ G ++ + +
Sbjct: 5 NLKRRKLRTF------LTVLGVVIGTASIVVMVSLGLGLQKSVYDEM 45
>gi|88602702|ref|YP_502880.1| hypothetical protein Mhun_1426 [Methanospirillum hungatei JF-1]
gi|88188164|gb|ABD41161.1| protein of unknown function DUF214 [Methanospirillum hungatei JF-1]
Length = 402
Score = 40.1 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 31/259 (11%), Positives = 79/259 (30%), Gaps = 3/259 (1%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
+A R + + F+ + + + V + V ++ V+ F I N
Sbjct: 7 SVAFFLAIRSIQRGNRFTFLLTVAIMGLVFVNL-VFLPSIISGVVVNFNTQSINYN-YGN 64
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+ ++ + + ++ I +VI P S A + + SG +V +
Sbjct: 65 LVIEPRENTLYITGVDEVKQKISQISEVIGTSPRFSAGATYNYHGTQISGQIVGFNPRYE 124
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
G + D ++ + GD +
Sbjct: 125 QEVTLLHTKLKEGEFLAEGDGDSILLGAQLAGNIDERKDKTDSLGGVTAGDSILVTFNNG 184
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
K + + +++L+E + + + + + V + E+ + ++
Sbjct: 185 VKRTLKVKGILDTGSFGVDRNGFVTLKEVNQVYGISDTATSVLVKLSQNGEEERYKKILM 244
Query: 246 RILGNGVVVIDWQQRYQIF 264
G + +Q++ Q F
Sbjct: 245 ES-GIAQKIRTFQEKGQGF 262
>gi|323969636|gb|EGB64923.1| ABC transporter [Escherichia coli TA007]
Length = 648
Score = 40.1 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLHVWLPYSTMSGLVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|284161798|ref|YP_003400421.1| hypothetical protein Arcpr_0684 [Archaeoglobus profundus DSM 5631]
gi|284011795|gb|ADB57748.1| protein of unknown function DUF214 [Archaeoglobus profundus DSM
5631]
Length = 370
Score = 40.1 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 34/239 (14%), Positives = 74/239 (30%), Gaps = 29/239 (12%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A R L I + S ++ +G++IGVMA+ + + +++ I V+I
Sbjct: 5 LALRNLKR------IKVRSALAIVGIIIGVMAISSIGIFGESLKASILENFKDIANEVII 58
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
Y + + + + + + V GI + D
Sbjct: 59 MPDYTHGYTSIDEKTLEKLKRITYAEILPIKSDSALVSYKDKKTYLTVYGIDSKDAEKFF 118
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
Y ++G ++A + +G KI I V +
Sbjct: 119 EVEEGSYKG----------CLVGSNVAEYFKLRVGSKIEIEGREFRVGGILRQEARFDIN 168
Query: 191 VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
+ + ++ F+ E + + V V + + I+ E I ++
Sbjct: 169 PNFA------------IILPTEDFDKLFDKEG-YTMVIVKVDEIENIDNLKEYIKSVIN 214
>gi|255100558|ref|ZP_05329535.1| ABC transporter, permease protein [Clostridium difficile QCD-63q42]
Length = 410
Score = 40.1 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 33/258 (12%), Positives = 79/258 (30%), Gaps = 24/258 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ + L ++ F+ + + ++IG+ ++I+V S+ NGF++++ K V +N +
Sbjct: 4 LKNSLANLKGHKLRVFV------ALLWIIIGITSVILVSSIGNGFQKEIKKSVNNVNPNK 57
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ P K L +S V ++ G + + +S S+
Sbjct: 58 TTISFESADNTGLTDDMSIFLKPFNAKDLEELSFVEGVERIAPSRDGFNLDSVYSSQASF 117
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ + G V D L I + S + +G
Sbjct: 118 DKKTTYVDVGPVKKDSKINLICGRDFSLDDEKRKVILLTLQSTSEIFENPEDALGHGINI 177
Query: 189 YTVLGM---------------FRMRFPDYDNGMVYMSLQEAQLYFNLE---NAVSGIEVF 230
+ F + D + + + N + +++
Sbjct: 178 NGTIFEIIGVLDDSQQNQAGGFFGGYQDMQFTTSLVPKKAFDTLMSQNSYSNEIYQLDLV 237
Query: 231 VKDPDAIEKTHENIVRIL 248
+ + N++ L
Sbjct: 238 SSKGYNVNEVANNVIAKL 255
>gi|126699131|ref|YP_001088028.1| ABC transporter permease [Clostridium difficile 630]
gi|254975084|ref|ZP_05271556.1| ABC transporter, permease protein [Clostridium difficile QCD-66c26]
gi|255092473|ref|ZP_05321951.1| ABC transporter, permease protein [Clostridium difficile CIP
107932]
gi|255306496|ref|ZP_05350667.1| ABC transporter, permease protein [Clostridium difficile ATCC
43255]
gi|255314212|ref|ZP_05355795.1| ABC transporter, permease protein [Clostridium difficile QCD-76w55]
gi|255516890|ref|ZP_05384566.1| ABC transporter, permease protein [Clostridium difficile QCD-97b34]
gi|255649991|ref|ZP_05396893.1| ABC transporter, permease protein [Clostridium difficile QCD-37x79]
gi|260683142|ref|YP_003214427.1| ABC transporter permease [Clostridium difficile CD196]
gi|260686740|ref|YP_003217873.1| ABC transporter permease [Clostridium difficile R20291]
gi|306520067|ref|ZP_07406414.1| ABC transporter, permease protein [Clostridium difficile QCD-32g58]
gi|115250568|emb|CAJ68392.1| ABC-type transport system, permease [Clostridium difficile]
gi|260209305|emb|CBA62689.1| ABC transporter, permease protein [Clostridium difficile CD196]
gi|260212756|emb|CBE03886.1| ABC transporter, permease protein [Clostridium difficile R20291]
Length = 410
Score = 40.1 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 33/258 (12%), Positives = 79/258 (30%), Gaps = 24/258 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ + L ++ F+ + + ++IG+ ++I+V S+ NGF++++ K V +N +
Sbjct: 4 LKNSLANLKGHKLRVFV------ALLWIIIGITSVILVSSIGNGFQKEIKKSVNNVNPNK 57
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ P K L +S V ++ G + + +S S+
Sbjct: 58 TTISFESADNTGLTDDMSIFLKPFNAKDLEELSFVEGVERIAPSRDGFNLDSVYSSQASF 117
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ + G V D L I + S + +G
Sbjct: 118 DKKTTYVDVGPVKKDSKINLICGRDFSLDDEKRKVILLTLQSTSEIFENPEDALGHGINI 177
Query: 189 YTVLGM---------------FRMRFPDYDNGMVYMSLQEAQLYFNLE---NAVSGIEVF 230
+ F + D + + + N + +++
Sbjct: 178 NGTIFEIIGVLDDSQQNQAGGFFGGYQDMQFTTSLVPKKAFDTLMSQNSYSNEIYQLDLV 237
Query: 231 VKDPDAIEKTHENIVRIL 248
+ + N++ L
Sbjct: 238 SSKGYNVNEVANNVIAKL 255
>gi|148925964|ref|ZP_01809651.1| ABC-type transmembrane transport protein [Campylobacter jejuni
subsp. jejuni CG8486]
gi|145844950|gb|EDK22054.1| ABC-type transmembrane transport protein [Campylobacter jejuni
subsp. jejuni CG8486]
Length = 410
Score = 40.1 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 29/243 (11%), Positives = 75/243 (30%), Gaps = 9/243 (3%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A+ + +++ S ++ +G++IG+ +++ V+++ G + +++ + + +
Sbjct: 19 FKIAYSSILAHKLR------SILTMLGIIIGIASVVCVVALGLGSQAKVLESIARLGTNT 72
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + D + RL+F +SG + +S
Sbjct: 73 IEIRPGKGFGDLRSGKTRLNFSDLETLRSLEYLEAVDAHSNTSGVATYTNISLSARAEGV 132
Query: 129 LQNSFSR---FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
N+F+ + + +
Sbjct: 133 GVNNFAIEGLRIDAGRILNNDDVKNSTNVAVLDFNAKKNLFPDEKSENILGRVVLFNSQP 192
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
K VL + + + +Y+ + + I V VKD + I+
Sbjct: 193 FKIIGVLQKDTDKPIEDNVVRLYIPYTTLMNKLTGDRNLREIIVKVKDDVSSTLAENAII 252
Query: 246 RIL 248
RIL
Sbjct: 253 RIL 255
>gi|331085559|ref|ZP_08334643.1| hypothetical protein HMPREF0987_00946 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330407446|gb|EGG86948.1| hypothetical protein HMPREF0987_00946 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 477
Score = 40.1 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 25/46 (54%), Gaps = 6/46 (13%)
Query: 15 YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
L + F ++ +GV+IG +++V++S+ G ++ M K+
Sbjct: 13 NLKRRKLRTF------LTVLGVVIGTASIVVMISLGLGMQKSMYKQ 52
>gi|326333585|ref|ZP_08199824.1| macrolide export ATP-binding/permease protein MacB
[Nocardioidaceae bacterium Broad-1]
gi|325948601|gb|EGD40702.1| macrolide export ATP-binding/permease protein MacB
[Nocardioidaceae bacterium Broad-1]
Length = 411
Score = 40.1 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + AW + S+R S ++ +G++IG+ ++I+ + + G ++ + +
Sbjct: 1 MGMSWAETFRTAWDAVRSHRLR------SALTMLGIVIGIASVILTVGLGQGAQDQVKSQ 54
Query: 61 VLGINGH 67
+ + +
Sbjct: 55 ISALGSN 61
>gi|148361253|ref|YP_001252460.1| ABC transporter permease [Legionella pneumophila str. Corby]
gi|296108592|ref|YP_003620293.1| ABC transporter, permease [Legionella pneumophila 2300/99 Alcoy]
gi|148283026|gb|ABQ57114.1| ABC transporter, permease [Legionella pneumophila str. Corby]
gi|295650494|gb|ADG26341.1| ABC transporter, permease [Legionella pneumophila 2300/99 Alcoy]
Length = 397
Score = 40.1 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 23/243 (9%), Positives = 72/243 (29%), Gaps = 9/243 (3%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A L +++ S ++ +G+++G A++ ++S E +++ + ++
Sbjct: 10 ALVNLTASKLR------SLLAVLGILVGTAAVVALISCGQLATEKALEQFKALGTDLLAV 63
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS---DFSY 128
Y + + I ++ + ++ S+ + G +
Sbjct: 64 SVYQKMPSKSHSESDSLTIDQWQQIAERIPYVLRIAPYSTAYQTLSFNGKVMQGAVIGAD 123
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ F + + +I + P G +G + +
Sbjct: 124 ESLADIIHVTLAQGHFVSFLDSFEHFCVIGDSLAQQIKEITLDDPIGKQLRIGQSLYTII 183
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
F + D + + + ++ + +K I++ I I+
Sbjct: 184 GVAERWKENGFFNEDINQAVIIPLAGMSLVSKDAKINNAVLLLKPDSPIDEVINEIKEII 243
Query: 249 GNG 251
+
Sbjct: 244 NSQ 246
>gi|302523847|ref|ZP_07276189.1| macrolide export ATP-binding/permease macB [Streptomyces sp. AA4]
gi|302432742|gb|EFL04558.1| macrolide export ATP-binding/permease macB [Streptomyces sp. AA4]
Length = 400
Score = 40.1 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 40/274 (14%), Positives = 82/274 (29%), Gaps = 23/274 (8%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A R L SN+ S ++ +G+ IGV ++I++++V NG + + G+ VV
Sbjct: 10 AVRGLASNKLR------SVLTTLGITIGVASVILLVAVGNGASAAITASIQGLGTDVVNV 63
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
Q R + D ++ V + + S
Sbjct: 64 TPL--RGGGQTSQVRPLTVQDAHALVDPVGAPDVKAAAPVVNTSGTATYGQTSYDVSSVV 121
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTV 191
Y +N + +D+ + + + S +G P+G + S
Sbjct: 122 GTEPSYFTTTNRQIADGQLFSAEDVTQARKVVVLGPTTAQSIFGASEPVGKNVLINSIQF 181
Query: 192 LGMFR-----MRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ + + + Q ++ I V + D+I +
Sbjct: 182 TVIGVLQTKGSTGLQNADDVAIAPISAVQNSLAGYGGLNQIAVQAANADSIGLAQAEVTA 241
Query: 247 IL----------GNGVVVIDWQQRYQIFFSCYES 270
IL + + Q Q S ++
Sbjct: 242 ILDARHGIPASANPDFQIQNSAQLLQTRTSAIQT 275
>gi|188994310|ref|YP_001928562.1| putative ABC transporter ATP-binding protein [Porphyromonas
gingivalis ATCC 33277]
gi|188593990|dbj|BAG32965.1| putative ABC transporter ATP-binding protein [Porphyromonas
gingivalis ATCC 33277]
Length = 420
Score = 40.1 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 44/264 (16%), Positives = 77/264 (29%), Gaps = 16/264 (6%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M F R I W ++SNR+ S + GV G+ L+V+ SV GF +++
Sbjct: 1 MRFFDRDRWIEIWHTIYSNRRR------SLATAFGVFWGIFMLVVLTSVGAGFSNGILRE 54
Query: 61 VLGINGHVVIQQ------KYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
V GI + Y + + I V +P V + + +
Sbjct: 55 VSGIASNSAFYWTNLTSKPYMGFRSGRNWSMTSGDIRTVRSQVPEVEFISPIMWGARSNK 114
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
V+ S + V+ R + K + I K +
Sbjct: 115 NVVFGDKSETYSIVGAEPDYFEISRVNILQGRMLNAVDDKLRRKVCMIGKEVKEKLFGTT 174
Query: 175 GDV----TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVF 230
+ G+ R + VY+ Q N N V V
Sbjct: 175 DPIGQVLRVNGLYYRVIGVLEAKSNNVTIGSSPKRSVYLPYSVLQQISNSGNRVENFAVS 234
Query: 231 VKDPDAIEKTHENIVRILGNGVVV 254
+++ I I+ + +
Sbjct: 235 AYPLADMKQMFRKIETIIRSRNQI 258
>gi|225870644|ref|YP_002746591.1| permease [Streptococcus equi subsp. equi 4047]
gi|225700048|emb|CAW94091.1| putative permease [Streptococcus equi subsp. equi 4047]
Length = 408
Score = 40.1 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 12/84 (14%), Positives = 30/84 (35%), Gaps = 6/84 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A ++ ++ S ++ +G++IGV A++++M + + + V
Sbjct: 5 WKFALSSIWGHKLR------SILTMLGIIIGVAAVVIIMGLGAAMTKRVTDSFSNDQKEV 58
Query: 69 VIQQKYYPLVDYQFIANRLDFIPD 92
+ K D + A
Sbjct: 59 QLYFKAKGDEDNPYAAFAAHENEQ 82
>gi|222530257|ref|YP_002574139.1| hypothetical protein Athe_2296 [Caldicellulosiruptor bescii DSM
6725]
gi|222457104|gb|ACM61366.1| protein of unknown function DUF214 [Caldicellulosiruptor bescii DSM
6725]
Length = 392
Score = 40.1 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 32/252 (12%), Positives = 81/252 (32%), Gaps = 19/252 (7%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M+ F+ +A + + SN+ +F ++ +GV+IG+ A+I V+ + G + + R
Sbjct: 1 MAQFA-LAFKMAIKSILSNKLRSF------LTMLGVIIGIWAVIAVVGLAQGSTKSITDR 53
Query: 61 VLGINGHVVIQQ----KYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
+ + +++ V Y+ + + + I+ + + +
Sbjct: 54 LQRLGTNLIQINITGRNSNRNVTYEELQQFAEQHAEDIEAIAPTVSSSVTLKYGTNTHDT 113
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
+ G + + S + D D + V + + + I
Sbjct: 114 TLIGTTADYSLVRDVNVSSGRFILPIDVDYRQKVALVGTYIVKDLFNGQNPIGKKIKING 173
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
+G+ + D+ V + + AQ + + + D +
Sbjct: 174 QIFTVVGVLEERANS-------QEQSDDDQVIVPVTVAQRLTR-NAIIRNFAIKITDGNR 225
Query: 237 IEKTHENIVRIL 248
E + L
Sbjct: 226 SEVVMNYLNDFL 237
>gi|319938820|ref|ZP_08013184.1| MoaC protein [Streptococcus anginosus 1_2_62CV]
gi|319811870|gb|EFW08136.1| MoaC protein [Streptococcus anginosus 1_2_62CV]
Length = 1121
Score = 40.1 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 32/258 (12%), Positives = 64/258 (24%), Gaps = 23/258 (8%)
Query: 3 IFSRFEV--IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
I+ R V R +F ++ ++ GV V L + M+ E M R
Sbjct: 737 IWRRLSFTQKVTARNIFRYKQRM------LMTIFGVAGSVALLFAGLG-MSSSMEGMGNR 789
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
G + A + D Q + G
Sbjct: 790 QYGEIIKYDAVISQKQHLKLDEQAAINHLLADKKIAKKRGIYQEIFTKKIKGAKDEQ--- 846
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ G + F L + ++ + + V
Sbjct: 847 ---------SLALFVTTGKDFHHFIELYDSQSKASLNLSSHGAVISQKLATIMHVSVGDT 897
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD--AIE 238
+ Y ++M+ Q F + + + +KD ++
Sbjct: 898 FEVTSDEGRRYKIKVSGIAEMYAGHFIFMNQDYYQTVFARKFQENAYLIKLKDSSSKNVQ 957
Query: 239 KTHENIVRILGNGVVVID 256
T +++ G VV +
Sbjct: 958 DTAAAFMKLTGVRAVVQN 975
>gi|319407780|emb|CBI81431.1| ATP-binding protein of ABC transporter [Bartonella sp. 1-1C]
Length = 660
Score = 40.1 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 26/243 (10%), Positives = 75/243 (30%), Gaps = 8/243 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++A + ++R F ++ +G++IG+ +++ ++++ NG ++ +++ + +
Sbjct: 269 AFVMALLAMNAHRMRTF------LTMLGMIIGISSVVAMIALGNGTQKKILENLKSFGTN 322
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D Q D + S +S + +
Sbjct: 323 TLTIMPGKSFSDPQSGKITSLVEADAEALSELPYVAGVTSQISVSSMVYYNAIETKAVVV 382
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ F G + + + + + + +
Sbjct: 383 GVGEQFFEIQGLQVIQGRLFDQSSVRDRAVDLIIEKEAISVLFPHSQENPIGKIVRVGNV 442
Query: 188 SYTVLGMFRMRFPD--YDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++G+ + D +Y+ Q+ F V I + + D + I
Sbjct: 443 PARIIGVVDSQNHSGVSDTIQIYLPYTAVQMRFLGRTDVRAIILKIADNVDSQLAETMIR 502
Query: 246 RIL 248
R+L
Sbjct: 503 RLL 505
>gi|315124126|ref|YP_004066130.1| macrolide-specific ABC-type efflux carrier [Campylobacter jejuni
subsp. jejuni ICDCCJ07001]
gi|315017848|gb|ADT65941.1| macrolide-specific ABC-type efflux carrier [Campylobacter jejuni
subsp. jejuni ICDCCJ07001]
Length = 410
Score = 40.1 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 29/243 (11%), Positives = 75/243 (30%), Gaps = 9/243 (3%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A+ + +++ S ++ +G++IG+ +++ V+++ G + +++ + + +
Sbjct: 19 FKIAYSSILAHKLR------SILTMLGIIIGIASVVCVVALGLGSQAKVLESIARLGTNT 72
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + D + RL+F +SG + +S
Sbjct: 73 IEIRPGRGFGDLRSGKTRLNFSDLETLRSLEYLEAVDAHSNTSGVATYTNISLSARAEGV 132
Query: 129 LQNSFSR---FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
N+F+ + + +
Sbjct: 133 GVNNFAIEGLRIDAGRILNNDDVKNSTNVAVLDFNAKKNLFPDEKSENILGRVVLFNSQP 192
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
K VL + + + +Y+ + + I V VKD + I+
Sbjct: 193 FKIIGVLQKDTDKPIEDNVVRLYIPYTTLMNKLTGDRNLREIIVKVKDDVSSTLAENAII 252
Query: 246 RIL 248
RIL
Sbjct: 253 RIL 255
>gi|20091663|ref|NP_617738.1| ABC transporter, permease protein [Methanosarcina acetivorans C2A]
gi|19916833|gb|AAM06218.1| ABC transporter, permease protein [Methanosarcina acetivorans C2A]
Length = 401
Score = 40.1 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 35/259 (13%), Positives = 85/259 (32%), Gaps = 11/259 (4%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
++ +A R + K + + + + + L++ S++ G + ++
Sbjct: 5 AKVSFFLASRSITRGNKG-----ITIFTVFVLTLIFIQLVLFSSILAGVTLKFNELMVDY 59
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKV--LPFVSGQAFVSGLSSGGSGVLVRGIS 122
V+ + + + I + +V G V GI
Sbjct: 60 QTGNVVIEPKEEEHYIEDASALQKKIESLPQVVGTSARLKTTGTFRYKEKEIGGTVYGID 119
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+D +++ +I+G++++ G + + GD + +
Sbjct: 120 PADEAFVTGLEGAVISGEFLSRPDRGEIILGREVSGGYGALMESRSLGGVEVGDTIELTI 179
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA--VSGIEVFVKDPDAIEKT 240
++K + V G++ F D G Y+S + + +EN I V +T
Sbjct: 180 SGKTKEFRVKGIYSTLFFMADAG-AYISRADMEEMLGVENEDYAQEIAVKTTPGTDEYET 238
Query: 241 HENIVRILGNGVVVIDWQQ 259
++ LG + W +
Sbjct: 239 RTALLS-LGIKENIRTWHE 256
>gi|254788466|ref|YP_003075895.1| FtsX family membrane protein [Teredinibacter turnerae T7901]
gi|237683883|gb|ACR11147.1| FtsX family membrane protein [Teredinibacter turnerae T7901]
Length = 418
Score = 40.1 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 35/251 (13%), Positives = 73/251 (29%), Gaps = 17/251 (6%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI----- 70
L N+ F ++ GV GV LI+++ G + +
Sbjct: 13 LSRNKLRTF------LTAFGVFWGVFMLILLLGAGRGLSNASDNSFGSDDRTSIWISAGR 66
Query: 71 ----QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD- 125
P +F + + + I + ++S + + + S +
Sbjct: 67 TALPYHGRPPRRLIEFTEDDIAAVQQNIAGVQYISAENRAGERWQRTVNITYKNQSANFG 126
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ + F R + + R + +D R + + + +
Sbjct: 127 VYGVADDFFRIKKYIDYPYGRTLNGLDERDARRVALVGTVVGDRLFGSGVNPLGKEINFH 186
Query: 186 SKSYTVLGMFRMRFPDYDNG-MVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ V+G+F + VY+ L Q F N + I + E +
Sbjct: 187 GIVFQVVGVFHDEANEGRMSERVYIPLSTFQKTFGRANKIGQITLTPAPGLDPIAFEEKV 246
Query: 245 VRILGNGVVVI 255
V +L VV
Sbjct: 247 VALLRERHVVS 257
>gi|51892115|ref|YP_074806.1| ABC transporter permease protein [Symbiobacterium thermophilum
IAM 14863]
gi|51855804|dbj|BAD39962.1| ABC transporter permease protein [Symbiobacterium thermophilum
IAM 14863]
Length = 400
Score = 40.1 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDM 57
+ VAW L +N+ S ++ IG++IGV ++I V+++ G +
Sbjct: 7 LRVAWEALVANKMR------SILTMIGIIIGVGSVIAVVAIGRGTESAV 49
>gi|223934524|ref|ZP_03626445.1| protein of unknown function DUF214 [bacterium Ellin514]
gi|223896987|gb|EEF63427.1| protein of unknown function DUF214 [bacterium Ellin514]
Length = 409
Score = 39.8 bits (90), Expect = 0.36, Method: Composition-based stats.
Identities = 34/259 (13%), Positives = 89/259 (34%), Gaps = 18/259 (6%)
Query: 1 MSIFSRFE--VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMI 58
M++F+ AW + +N+ S ++ +G++IG++ + ++ + +NG +
Sbjct: 1 MNLFTELREGFSFAWDSVRANKMR------SALTTLGIVIGIVTVTLMGTAINGMNDAFH 54
Query: 59 KRVLGINGHVVIQQKYYPLVDYQFIA-----NRLDFIPDVIKVLPFVSGQAFVSGLSSGG 113
K + + ++ L + R + V + ++ V+ G
Sbjct: 55 KSISVLGADTFFVGRFSWLDHSEADWLKAQRRREFTLAQVKQAARQLTMARAVAPYVVMG 114
Query: 114 SGVLVRGISNSDFSYL----QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKIN 169
V+ + S+S + + + + + G+ + +
Sbjct: 115 QPVVYKSRSSSRVMVIGTTDEYLITSGFSMAQGRYLTASESEGGRPVCVIGNQVATNLFI 174
Query: 170 ILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV 229
SP G+ +G + + + V + +Q+ + + I+V
Sbjct: 175 GESPIGNKIKLGERNLEVIGVLEKQGSFLGMESLDNEVIVPVQQFLVGYARNPDFQ-IQV 233
Query: 230 FVKDPDAIEKTHENIVRIL 248
+D +IE E + +L
Sbjct: 234 KARDIGSIEDAKEELRGVL 252
>gi|329930124|ref|ZP_08283743.1| efflux ABC transporter, permease protein [Paenibacillus sp. HGF5]
gi|328935383|gb|EGG31858.1| efflux ABC transporter, permease protein [Paenibacillus sp. HGF5]
Length = 863
Score = 39.8 bits (90), Expect = 0.37, Method: Composition-based stats.
Identities = 9/39 (23%), Positives = 18/39 (46%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMS 48
+A R L N++ ++I I + ++ V L+ S
Sbjct: 6 KLAIRNLKQNKRRTLVTIIGVIISVAMVTAVATLVFSFS 44
>gi|189499953|ref|YP_001959423.1| hypothetical protein Cphamn1_0999 [Chlorobium phaeobacteroides BS1]
gi|189495394|gb|ACE03942.1| protein of unknown function DUF214 [Chlorobium phaeobacteroides
BS1]
Length = 417
Score = 39.8 bits (90), Expect = 0.37, Method: Composition-based stats.
Identities = 34/254 (13%), Positives = 75/254 (29%), Gaps = 20/254 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+++A + N+ +F ++ +GV+IG++++ ++ + +NG K + +
Sbjct: 11 SLLMAVAQIKGNKTRSF------LTALGVIIGIVSITMMGTAINGIDAGFEKSLSMLGYD 64
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
V+ QK Q+ + A + + S S
Sbjct: 65 VIYVQKSSWSSMGQWWRYKNRPDLKTEYAAQINRIIADNPDSGLEIAVPQMSSYSASVSH 124
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIG---KDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+N F + D+ R + L + + P +
Sbjct: 125 EDKNLQQVFALGTNADYLRTASGDLSEGRFFLPHESDGGSMVCLIGDDIATGLFPNEPAL 184
Query: 185 RSKSYTVLGMFRMRFPDY----------DNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
K FR+ + V L + F V+ + + K+
Sbjct: 185 GKKLKLKNRTFRIIGVFRKQGKFLGLFSFDNQVITPLNAFKKVFGNRRYVT-LRIKTKEK 243
Query: 235 DAIEKTHENIVRIL 248
+ E I I+
Sbjct: 244 VKVADAREEIRGIM 257
>gi|237722842|ref|ZP_04553323.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|260175133|ref|ZP_05761545.1| ABC transporter, putative permease [Bacteroides sp. D2]
gi|299147591|ref|ZP_07040655.1| ABC transporter, putative permease [Bacteroides sp. 3_1_23]
gi|315923367|ref|ZP_07919607.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|229447364|gb|EEO53155.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|298514378|gb|EFI38263.1| ABC transporter, putative permease [Bacteroides sp. 3_1_23]
gi|313697242|gb|EFS34077.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 419
Score = 39.8 bits (90), Expect = 0.37, Method: Composition-based stats.
Identities = 24/225 (10%), Positives = 62/225 (27%), Gaps = 8/225 (3%)
Query: 20 RKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVD 79
++N + + + V G+ LIV++ NG + + + +
Sbjct: 13 KRNKLRTFLTGFA---VAWGIFMLIVLLGAGNGLIHAFEQSASERAMNSIKIFPGWTSKS 69
Query: 80 YQ--FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFY 137
Y R+ + + ++ G + S + +
Sbjct: 70 YDGLKEGRRVQLDNKDMDATSHYFPNHVIKAGATVWQGGVNLSFGQEYVSLNLSGVYPNH 129
Query: 138 GNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGM--- 194
V I D+ + + K + +G + V+
Sbjct: 130 TEVEVVKLFEGRFINEIDIKERRKVIVLHKKTAEILFNKTHTEPIGQFVNAGNVVYQVVG 189
Query: 195 FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
D + Y+ Q +N + ++ + + K+ + +E
Sbjct: 190 LYNDKGDSGDSDAYIPFTTLQTIYNKGDKLNNLVMTTKNLETVEA 234
>gi|153815064|ref|ZP_01967732.1| hypothetical protein RUMTOR_01281 [Ruminococcus torques ATCC
27756]
gi|145847632|gb|EDK24550.1| hypothetical protein RUMTOR_01281 [Ruminococcus torques ATCC
27756]
Length = 465
Score = 39.8 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 6/44 (13%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
L + F ++ +GV+IG +++V++S+ G +E M K
Sbjct: 6 LRRRKLRTF------LTVLGVVIGTASIVVMISLGLGLQESMYK 43
>gi|194333959|ref|YP_002015819.1| ABC transporter-like protein [Prosthecochloris aestuarii DSM 271]
gi|194311777|gb|ACF46172.1| ABC transporter related [Prosthecochloris aestuarii DSM 271]
Length = 653
Score = 39.8 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Query: 6 RFEVIV--AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
RF + A + + SN+ +F +S +G+++GV ++I +M++ G + M +++
Sbjct: 252 RFSGFLLQALQSMLSNKVRSF------LSVLGILVGVASVIAMMALGEGAKASMQEQLKS 305
Query: 64 INGH 67
+ +
Sbjct: 306 MGSN 309
>gi|255655547|ref|ZP_05400956.1| ABC transporter, permease protein [Clostridium difficile QCD-23m63]
gi|296451538|ref|ZP_06893273.1| ABC superfamily ATP binding cassette transporter, permease protein
[Clostridium difficile NAP08]
gi|296880113|ref|ZP_06904080.1| ABC superfamily ATP binding cassette transporter, permease protein
[Clostridium difficile NAP07]
gi|296259603|gb|EFH06463.1| ABC superfamily ATP binding cassette transporter, permease protein
[Clostridium difficile NAP08]
gi|296428838|gb|EFH14718.1| ABC superfamily ATP binding cassette transporter, permease protein
[Clostridium difficile NAP07]
Length = 410
Score = 39.8 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 33/258 (12%), Positives = 79/258 (30%), Gaps = 24/258 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ + L ++ F+ + + ++IG+ ++I+V S+ NGF++++ K V +N +
Sbjct: 4 LKNSLANLKGHKLRVFV------ALLWIIIGITSVILVSSIGNGFQKEIKKSVNNVNPNK 57
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ P K L +S V ++ G + + +S S+
Sbjct: 58 TTISFESADNTGLTDDMSIFLKPFNAKDLEELSFVEGVERIAPSRDGFNLDSVYSSQASF 117
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ + G V D L I + S + +G
Sbjct: 118 DKKTTYVDVGPVKKDSKINLICGRDFSLDDEKRKVILLTLQSTSEIFENPEDALGHGINI 177
Query: 189 YTVLGM---------------FRMRFPDYDNGMVYMSLQEAQLYFNLE---NAVSGIEVF 230
+ F + D + + + N + +++
Sbjct: 178 NGTIFEIIGVLDDSQQNQAGGFFGGYQDMQFTTSLIPKKAFDTLMSQNSYSNEIYQLDLV 237
Query: 231 VKDPDAIEKTHENIVRIL 248
+ + N++ L
Sbjct: 238 SSKGYNVNEVANNVISKL 255
>gi|160883613|ref|ZP_02064616.1| hypothetical protein BACOVA_01585 [Bacteroides ovatus ATCC 8483]
gi|156111026|gb|EDO12771.1| hypothetical protein BACOVA_01585 [Bacteroides ovatus ATCC 8483]
Length = 419
Score = 39.8 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 24/225 (10%), Positives = 63/225 (28%), Gaps = 8/225 (3%)
Query: 20 RKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVD 79
++N + + + V G+ LIV++ NG + + + +
Sbjct: 13 KRNKLRTFLTGFA---VAWGIFMLIVLLGAGNGLIHAFEQSASERAMNSIKIFPGWTSKS 69
Query: 80 YQ--FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFY 137
Y R+ + + ++ G + S + +
Sbjct: 70 YDGLKEGRRVQLDNKDMDATSHYFPNHVIKAGATVWQGGVNLSFGQEYVSLNLSGVYPNH 129
Query: 138 GNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGM--- 194
V I D+ + + + K + +G + V+
Sbjct: 130 TEVEVVKLFEGRFINEIDIKKRRKVIVLHKKTAEILFNKTHTEPIGQFVNAGNVVYQVVG 189
Query: 195 FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
D + Y+ Q +N + ++ + + K+ + +E
Sbjct: 190 LYNDKGDSGDSDAYIPFTTLQTIYNKGDKLNNLVMTTKNLETVEA 234
>gi|257462992|ref|ZP_05627396.1| ABC transporter permease protein [Fusobacterium sp. D12]
gi|317060608|ref|ZP_07925093.1| ABC transporter permease [Fusobacterium sp. D12]
gi|313686284|gb|EFS23119.1| ABC transporter permease [Fusobacterium sp. D12]
Length = 407
Score = 39.8 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 39/266 (14%), Positives = 89/266 (33%), Gaps = 18/266 (6%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFRE----DMI 58
+ + A+ L +++ +F ++ +G++IG+ +++ + S+ G +E D+
Sbjct: 1 MMLLEILKSAFSTLKASKMRSF------LTMLGIIIGICSVMSMWSIGRGGQEGITGDLK 54
Query: 59 KRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
K G V K Y F +++ + + G+ G +
Sbjct: 55 KNGYGKFTVTVDNSKESFRYKYLFSLSQIADLKKAGNFKKVAAQVEEYFGIKIGEEKEGI 114
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVII-------GKDLARNLGISIGDKINIL 171
R ++ + + G F+ + K L + +IG ++ I
Sbjct: 115 RINMSTPDFEVLDPVEMMAGRNFLSFEYSPKEYVILLDSLTAKGLFGSEKNAIGKEVEIS 174
Query: 172 SPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAV-SGIEVF 230
+ + + R+ ++ + Q FN N V + I +
Sbjct: 175 KKRRGMNLSYRVVGVFRNPLESFIRVLNTEFFPRFARIPYQNYNHVFNNGNGVFTDIIIE 234
Query: 231 VKDPDAIEKTHENIVRILGNGVVVID 256
K+P+ + K + L V D
Sbjct: 235 AKNPENLGKEMQETKNYLERRNEVKD 260
>gi|226226549|ref|YP_002760655.1| hypothetical membrane protein [Gemmatimonas aurantiaca T-27]
gi|226089740|dbj|BAH38185.1| hypothetical membrane protein [Gemmatimonas aurantiaca T-27]
Length = 411
Score = 39.8 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 33/99 (33%), Gaps = 8/99 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M+ F + +A + + +F + IGV IGVM LI V+S++ G +
Sbjct: 1 MAFFEAVRLALAT--IRVQKLKSF------FTLIGVTIGVMFLIAVVSIVEGMSRYVEND 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPF 99
G V I ++ P
Sbjct: 53 FAGKLFGVNTFTLRRWNDFNTDDNLDWREIQRRPRLFPQ 91
>gi|293373454|ref|ZP_06619809.1| efflux ABC transporter, permease protein [Bacteroides ovatus SD CMC
3f]
gi|292631592|gb|EFF50215.1| efflux ABC transporter, permease protein [Bacteroides ovatus SD CMC
3f]
Length = 419
Score = 39.8 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 23/225 (10%), Positives = 62/225 (27%), Gaps = 8/225 (3%)
Query: 20 RKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVD 79
++N + + + V G+ LIV++ NG + + + +
Sbjct: 13 KRNKLRTFLTGFA---VAWGIFMLIVLLGAGNGLIHAFEQSASERAMNSIKIFPGWTSKS 69
Query: 80 YQ--FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFY 137
Y R+ + + ++ G + S + +
Sbjct: 70 YDGLKEGRRVQLDNKDMDATSHYFPNHVIKAGATVWQGGVNLSFGQEYVSLNLSGVYPNH 129
Query: 138 GNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGM--- 194
V I D+ + + K + +G + V+
Sbjct: 130 TEVEVVKLFEGRFINEIDIKERRKVIVLHKKTAEILFNKTHTEPIGQFVNAGNVVYQVVG 189
Query: 195 FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+ + Y+ Q +N + ++ + + K+ + +E
Sbjct: 190 LYNDKGNSGDSDAYIPFTTLQTIYNKGDKLNNLVMTTKNLETVEA 234
>gi|313891658|ref|ZP_07825265.1| putative macrolide export ATP-binding/permease protein MacB
[Dialister microaerophilus UPII 345-E]
gi|313119936|gb|EFR43121.1| putative macrolide export ATP-binding/permease protein MacB
[Dialister microaerophilus UPII 345-E]
Length = 405
Score = 39.8 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 30/220 (13%), Positives = 72/220 (32%), Gaps = 19/220 (8%)
Query: 3 IFSRF---EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ + + +AW + SN+ S ++ +G++IG+ A+IV++ + G ++ +
Sbjct: 1 MMNNIYVESLWMAWDAVKSNKLR------SLLTMLGIIIGITAVIVLLGLGFGIQDRIEG 54
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
++ G+ ++V L+ + + + G V V
Sbjct: 55 KISGLGSNIVAIHPGSRSKYGSERTGALESLSYKDYLAIKKLPNIKNASPLVHGQYVAVN 114
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
G +N + G S +I L +++ +L
Sbjct: 115 GN--------KNWNTDISGVNSEYITMTDQKLIEGRLWTEKEYVNRERVVVLGKTVANNL 166
Query: 180 MGMGIR--SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLY 217
G K F + G+++ Q+ ++
Sbjct: 167 FGEISPIGKKIRVNNMPFTVIGVLEPKGLLFGFDQDDRIL 206
>gi|220933159|ref|YP_002510067.1| ABC-type transport system, involved in lipoprotein release,
permease component [Halothermothrix orenii H 168]
gi|219994469|gb|ACL71072.1| ABC-type transport system, involved in lipoprotein release,
permease component [Halothermothrix orenii H 168]
Length = 411
Score = 39.8 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 37/257 (14%), Positives = 85/257 (33%), Gaps = 11/257 (4%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A++ L +R I+ + I + + +LI M+ M+ + GH+
Sbjct: 5 KLAFKNLVRHRNRTLITASIIAIAIFFFLLLDSLIGGMTEMS-----YDTIINYEAGHLQ 59
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY- 128
+ + Y + + L + + V G S + + +
Sbjct: 60 LAHREYWEEEEELPLENLISGGQIFTSIEEVPGYYGSSPELNFPARLNNGFNELPVMGKG 119
Query: 129 -LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINI-LSPYGDVTPMGMGIRS 186
+ + F+R + + + ++ K+ + V +
Sbjct: 120 IIPDKFTRVFPIKDKFVEGEMFSRGEYKVVMGKRLAELMKLQLGDYITLLVKDKNETFNT 179
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ G+ P+ + +VY+ L AQ + N VS + V ++D + + +
Sbjct: 180 IEAEISGLIHTANPNVNRNIVYLPLDIAQQTLGVGNRVSKVIVRLEDKELASMAARELKK 239
Query: 247 ILG---NGVVVIDWQQR 260
LG G+ V W +
Sbjct: 240 QLGKTETGLGVYPWSEL 256
>gi|189423815|ref|YP_001950992.1| hypothetical protein Glov_0746 [Geobacter lovleyi SZ]
gi|189420074|gb|ACD94472.1| protein of unknown function DUF214 [Geobacter lovleyi SZ]
Length = 407
Score = 39.8 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 11/65 (16%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + A R L ++++ + ++ IG++IG+ ++I ++SV +E+ +++
Sbjct: 1 MIHPSHLKEAARSLLASKQR------TVLALIGIVIGIGSVIAMVSVGRIVQEESLRQFK 54
Query: 63 GINGH 67
+
Sbjct: 55 EMGTD 59
>gi|124008068|ref|ZP_01692767.1| transporter [Microscilla marina ATCC 23134]
gi|123986482|gb|EAY26288.1| transporter [Microscilla marina ATCC 23134]
Length = 258
Score = 39.8 bits (90), Expect = 0.40, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Query: 200 PDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG-NGVVVIDWQ 258
PD + +VY+ L Q + EN ++ + + VK P ++K + + V+ W+
Sbjct: 44 PDINKSLVYVPLTTGQNLYAAENRLTSLALVVKQPKKLDKVLTLLNAKVDTQQYKVMSWK 103
Query: 259 QRYQIFFSCYE 269
Q E
Sbjct: 104 QMMPEMVQMIE 114
>gi|167628558|ref|YP_001679057.1| permease, putative [Heliobacterium modesticaldum Ice1]
gi|167591298|gb|ABZ83046.1| permease, putative [Heliobacterium modesticaldum Ice1]
Length = 400
Score = 39.8 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 79/246 (32%), Gaps = 5/246 (2%)
Query: 26 SIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR--VLGINGHVVIQQKYYPLVDYQFI 83
+ S ++ +GV+IGV A++ +MS+ + R + + LG +V+ + FI
Sbjct: 18 RLRSGLTVLGVVIGVFAVVTLMSLGDTVRRQVSGQIAELGAGLLMVMSGREDAGHGPGFI 77
Query: 84 ANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSND 143
L + + + G+S + + + +++
Sbjct: 78 TMNLTLSDADRLRQIDGVDKVNPNLTVPARAERAKAGLSVTCYGDNADFLLVHGYELASG 137
Query: 144 FDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYD 203
+I + LG + + + G + L
Sbjct: 138 RMFQASEVIARSHVVLLGAKAKESLFGDAEAEGHMIRLNGATFRVIGTLKEKGRALIHDR 197
Query: 204 NGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQI 263
+ +V + Q + L+N + I V +DP + E I+ +L D Q Q
Sbjct: 198 DRIVVAPVTAVQDFSGLKN-IGVIFVRAEDPSRVPLVRERILSVLAKSHRQKDVQVFSQN 256
Query: 264 FFSCYE 269
+
Sbjct: 257 --DALQ 260
>gi|120435467|ref|YP_861153.1| FtsX family membrane protein [Gramella forsetii KT0803]
gi|117577617|emb|CAL66086.1| FtsX family membrane protein (predicted permease) [Gramella
forsetii KT0803]
Length = 412
Score = 39.8 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 34/254 (13%), Positives = 90/254 (35%), Gaps = 19/254 (7%)
Query: 3 IFSRFE--VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDM-IK 59
+FS F + +A + + S+ + ++ + + IG+ AL+ ++S ++ +
Sbjct: 1 MFSLFRENIRIALNSIRNQ------SLRTILTVLIIAIGITALVGILSAVSALENTISKD 54
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
+ +Q+ + + +++ + +V+ F + ++
Sbjct: 55 FASMGSNTFNLQRYEFQTQSSRSEDRKVNPVVSYREVMEFKEKFQYPYTETAISFTGTGS 114
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ S N + G V G++ + + I S + D
Sbjct: 115 AEIKYENEKTDPEISVMGVNEYYLENSGLNVEDGREFNVFDIENNNNVAVIGSDFKDGIF 174
Query: 180 MGMGIRSKSYTVLGMFR----------MRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV 229
G +++ +V G F + + V++ +Q A+ F+L N + V
Sbjct: 175 KGFDPVNRTISVRGAKFKVIGVLESKGSTFGNNQDLRVFIPIQHARSIFSLPNINYSLSV 234
Query: 230 FVKDPDAIEKTHEN 243
V+D + ++ +
Sbjct: 235 KVEDKEVLDAAMDE 248
>gi|328479322|gb|EGF48664.1| ABC transporter ATPase [Lactobacillus rhamnosus MTCC 5462]
Length = 270
Score = 39.8 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 28/62 (45%), Gaps = 8/62 (12%)
Query: 2 SIFSRFEVIVAWRYLFSNRKNAFIS-IASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+ + +++ + + + F++ AS I IG+ VV+++ +GF++ +
Sbjct: 145 KMSYLTALKLSFTNIMTKKGRTFLTAFASSIGIIGIA-------VVLALSSGFQKQIDNT 197
Query: 61 VL 62
Sbjct: 198 QS 199
>gi|239930823|ref|ZP_04687776.1| ABC transporter integral membrane protein [Streptomyces ghanaensis
ATCC 14672]
gi|291439191|ref|ZP_06578581.1| ABC transporter integral membrane protein [Streptomyces ghanaensis
ATCC 14672]
gi|291342086|gb|EFE69042.1| ABC transporter integral membrane protein [Streptomyces ghanaensis
ATCC 14672]
Length = 842
Score = 39.8 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 28/251 (11%), Positives = 63/251 (25%), Gaps = 11/251 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F A R + +++ ++ + VM+GV + + N + + K+
Sbjct: 1 MFRT-----ALRNVLAHKARL------LMTVLAVMLGVAFVSGTLVFTNTLSDALQKQSA 49
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
HV + + + A + G L
Sbjct: 50 KGFDHVDVAVTPQWKDAEGDRVGEYRALTPALVDDSARVPGAARAIGVVTGFTALADKDG 109
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
Q+ ++G + +G + + ++ +
Sbjct: 110 KLVGGGFQSQGGNYWGAEDPRYPLVEGRAPKGEGEILIDSETAERAGYAVGDTVRLSVDG 169
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ T + + AQ F + I V KD +
Sbjct: 170 PVLEPVVTGVFTTDDGNVAAGGSLTLFDTATAQKLFGKADTFDEIAVEAKDGVSQAALRA 229
Query: 243 NIVRILGNGVV 253
+ L + VV
Sbjct: 230 QLEEALPSDVV 240
>gi|183222374|ref|YP_001840370.1| ABC transporter ATP-binding protein [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
gi|189912421|ref|YP_001963976.1| ABC transporter ATP-binding protein [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167777097|gb|ABZ95398.1| ATP-binding protein of an ABC transporter complex [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Ames)']
gi|167780796|gb|ABZ99094.1| ABC-type transport system, ATP-binding protein; putative membrane
protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
Length = 648
Score = 39.8 bits (90), Expect = 0.42, Method: Composition-based stats.
Identities = 36/287 (12%), Positives = 91/287 (31%), Gaps = 27/287 (9%)
Query: 2 SIFSRFEVIVAWRYLFSNR----------KNAFISIAS-----FISFIGVMIGVMALIVV 46
++ + + F + K + S+AS F+S +G++ GV+ +I V
Sbjct: 227 TMDNPYPFQ----NFFRRKSGWNLVKGIFKQSLFSLASNQLRTFLSALGILFGVVCVISV 282
Query: 47 MSVMNGFREDMIKRVLGINGHVVIQQKYYPL---VDYQFIANRLDFIPDVIKVLPFVSGQ 103
M++ G ++ + ++ + ++VI + V + I DV V
Sbjct: 283 MALGEGAKKSVEEQFSSLGANLVIVRTGGMRSGGVSLEAGTVNRLDIDDVSAVSKKFPEV 342
Query: 104 AFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGIS 163
+S + +G + ++ + + F + N+ R A +
Sbjct: 343 KQISAVVNGRAQLVFGNRNWNSFVTGASPNYESLRNLDPIEGRFFTEEEENKRALVCLVG 402
Query: 164 IG--DKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE 221
++ + + L + +V + L A +
Sbjct: 403 NTVVRELYEGKNPVGTYLKINRVSFRVIGQLPEKGSTGYRDQDDVVLVPLNTAMRRLLNK 462
Query: 222 NAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCY 268
+AV +E+ + ++ E + + + L + +
Sbjct: 463 DAVDNLEMELDPNESSESFTKAMKQFLHERHGTN---ESMGNIYQVM 506
>gi|11499408|ref|NP_070647.1| hypothetical protein AF1820 [Archaeoglobus fulgidus DSM 4304]
gi|2648732|gb|AAB89436.1| predicted coding region AF_1820 [Archaeoglobus fulgidus DSM 4304]
Length = 791
Score = 39.8 bits (90), Expect = 0.42, Method: Composition-based stats.
Identities = 9/40 (22%), Positives = 20/40 (50%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALI 44
R +A R +F +++ ISI S ++ +++ M +
Sbjct: 425 MRLIFRLALRNIFRSKRRTAISIFSIVACTSLILNSMVFV 464
>gi|253998929|ref|YP_003050992.1| hypothetical protein Msip34_1219 [Methylovorus sp. SIP3-4]
gi|253985608|gb|ACT50465.1| protein of unknown function DUF214 [Methylovorus sp. SIP3-4]
Length = 406
Score = 39.8 bits (90), Expect = 0.42, Method: Composition-based stats.
Identities = 36/253 (14%), Positives = 88/253 (34%), Gaps = 16/253 (6%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AW + +NR F ++ +G++IGV A++++M++ G + + K + + ++ I
Sbjct: 9 AWHAMGANRLRTF------LTMLGMVIGVGAVVLMMAIGQGAEQAVKKSIQSMGSNLFIV 62
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
P + A +V + + + V N+ + +
Sbjct: 63 LAGPPNMGGARSATGNAPSLNVKDAAAMEDLEGVSAVAPTNAGSAQVIYAGNNWNTSI-I 121
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTV 191
+ Y ++ + V D+ +++ K + + +GD P+G IR K
Sbjct: 122 GTTPSYLDLRSWNLSDGYVFSDSDVRSATRVALIGKTVVQNLFGDEDPVGKTIRIKDSPF 181
Query: 192 ------LGMFRMRFPDYDNGMVYMSLQEAQLY---FNLENAVSGIEVFVKDPDAIEKTHE 242
+ + + + L +Q +V I V + + +
Sbjct: 182 IILGVLGDKGQSLDGRDQDDTIIIPLTTSQRRVFGTQFSGSVRQIMVQAESDKVMPMVED 241
Query: 243 NIVRILGNGVVVI 255
++ +L +
Sbjct: 242 SLNSLLRQRHRIR 254
>gi|329935906|ref|ZP_08285708.1| putative ABC transporter permease protein [Streptomyces
griseoaurantiacus M045]
gi|329304597|gb|EGG48473.1| putative ABC transporter permease protein [Streptomyces
griseoaurantiacus M045]
Length = 395
Score = 39.8 bits (90), Expect = 0.42, Method: Composition-based stats.
Identities = 38/238 (15%), Positives = 76/238 (31%), Gaps = 14/238 (5%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR--VLGINGHVVIQQK 73
L + F +S +G+ IGV A++ V+ + + R ++ +R LG N V +
Sbjct: 20 LRTRPLRVF------LSALGIAIGVAAMVAVVGISSSSRAEVDRRLDALGTNMLRVAPGQ 73
Query: 74 YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSF 133
+ + I + V V+ V + + + G + S S
Sbjct: 74 TPDGTTNRLPVESVPMIRRIGPV-QRVAATGVVEDAAVYRNRHVPVGRTGSIQVAAAWSG 132
Query: 134 SRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLG 193
R + A LG ++++ +P + G V
Sbjct: 133 LLPAVGGELRTGRWLSRATEEYPAVVLGAQAARRLDVYTPGTRLWLGGQ----WFALVGV 188
Query: 194 MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNG 251
+ + +G + Q A+ Y + S + V +D D + E +
Sbjct: 189 LDPVPLAPEIDGSALVGRQAARTYLGFDGHPSTVYVRTRD-DRVGAVREVLAATANPE 245
>gi|156742505|ref|YP_001432634.1| hypothetical protein Rcas_2537 [Roseiflexus castenholzii DSM 13941]
gi|156233833|gb|ABU58616.1| protein of unknown function DUF214 [Roseiflexus castenholzii DSM
13941]
Length = 793
Score = 39.8 bits (90), Expect = 0.42, Method: Composition-based stats.
Identities = 30/270 (11%), Positives = 77/270 (28%), Gaps = 33/270 (12%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++++ R F + +++ + ++ G+ I V SV N + + + N H
Sbjct: 415 PLMLSLRNTFRRKGRLALTMMT-LTLSGI-----IFISVFSVRNSLQLTLDDALKYFNFH 468
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
++ + I +P VI + + S ++ ++
Sbjct: 469 ILGVFNG--FYRTEQIERETLAVPGVIAAESWGFDMVRRVRPNDTESDSIIMYAVPAETR 526
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ + + D + L ++ + + I + +G
Sbjct: 527 MIIPTVLEGRWLLPEDENALVINSSVLGLEPDIKVGDTVTLKIDRRESEWKVVG------ 580
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK--DPDAIEKTHENIV 245
+ MVY + V + D E+ + +
Sbjct: 581 ---------IVRGIGGQAMVYTHYPYFARIRGFTGRAIAVTVQIDPSDAANQERVAKELE 631
Query: 246 RILGNGVVVID-------WQQRYQIFFSCY 268
+ V + +Q+ +IFF+
Sbjct: 632 AHYKS-VGMRSMMQTTAIIRQQNEIFFNIL 660
>gi|311897402|dbj|BAJ29810.1| putative membrane protein [Kitasatospora setae KM-6054]
Length = 400
Score = 39.8 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 10 IVAWRYL-FSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNG 52
++AW+ L F+ A + S ++ +GV+IGV ++I++++V NG
Sbjct: 1 MIAWQMLRFAVGGLAANKVRSALTMLGVLIGVASVILLLAVGNG 44
>gi|193214221|ref|YP_001995420.1| hypothetical protein Ctha_0502 [Chloroherpeton thalassium ATCC
35110]
gi|193087698|gb|ACF12973.1| protein of unknown function DUF214 [Chloroherpeton thalassium
ATCC 35110]
Length = 409
Score = 39.8 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F A++ + N+ S ++ +G++IGV ++IV++S+ G + + + +
Sbjct: 6 FKNL-FRTAYKSILKNKMR------SLLTSLGIIIGVGSVIVMVSIGEGAQAQIEENIRS 58
Query: 64 INGHVVI 70
+ +++
Sbjct: 59 LGTDLIM 65
>gi|147920315|ref|YP_685914.1| ABC transporter permease [uncultured methanogenic archaeon RC-I]
gi|110621310|emb|CAJ36588.1| predicted ABC-type transport system, permease component [uncultured
methanogenic archaeon RC-I]
Length = 400
Score = 39.8 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 20/231 (8%), Positives = 62/231 (26%), Gaps = 8/231 (3%)
Query: 27 IASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANR 86
+ +S +G++IGV+A++ +++ + + + + +I ++ +
Sbjct: 19 FKTLLSSLGIIIGVLAIVAMLTFGDALYSGVSSQFGTLELDTMILLPIGIDMNTGMQVQK 78
Query: 87 LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNV------ 140
V + + + + + ++ G+
Sbjct: 79 PPAKFTDRDVNIIRGTSGVKEVYPEISTSAMAQYKGENRTVAVSGIVPQYMGSYASQVDK 138
Query: 141 -SNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRF 199
K ++ N + +
Sbjct: 139 GRYLTQSDKYSVVLGSKVANGTFGRKIPTGSYMTLTNPYTGKSQDYVVVGIMNERNGSIL 198
Query: 200 PDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN 250
N VYM+ + + ++ S I + + + T N+ + L +
Sbjct: 199 AGDPNTAVYMTKAGIKALTD-QDTYSYIAIRADTVEGADMTASNVDKALKS 248
>gi|253997468|ref|YP_003049532.1| hypothetical protein Mmol_2103 [Methylotenera mobilis JLW8]
gi|253984147|gb|ACT49005.1| protein of unknown function DUF214 [Methylotenera mobilis JLW8]
Length = 407
Score = 39.8 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 35/253 (13%), Positives = 80/253 (31%), Gaps = 15/253 (5%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
AW + +NR F ++ +G++IGV A++++M++ G + + + + ++ +
Sbjct: 9 AWHAMGANRLRTF------LTMLGMVIGVSAVVLMMAIGQGAEAAVKRSISAMGSNLFVV 62
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
P+ A +V + + SN+ + +
Sbjct: 63 LSGPPMAGGARSATGNAPSLNVKDANAVAELDGVIGVAPVTMGKAQIVFGSNNWNTDIIG 122
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTV 191
+ + G + IG I ++ P+G IR K
Sbjct: 123 TTPSYLEIRGWSLSDGYAFSESDLRSATRVALIGKTIVQNMFGDNIDPIGKTIRIKQSPF 182
Query: 192 LG------MFRMRFPDYDNGMVYMSLQEAQLYF---NLENAVSGIEVFVKDPDAIEKTHE 242
+ + + + + L AQ L +V I V + + + E
Sbjct: 183 VILGVLDSKGQTLDGRDQDDTIIVPLTTAQRKLFGNQLPGSVRQIMVQAESDNTMTMVEE 242
Query: 243 NIVRILGNGVVVI 255
+ +L +
Sbjct: 243 GLNSLLNQRHNIR 255
>gi|150388208|ref|YP_001318257.1| hypothetical protein Amet_0368 [Alkaliphilus metalliredigens QYMF]
gi|149948070|gb|ABR46598.1| protein of unknown function DUF214 [Alkaliphilus metalliredigens
QYMF]
Length = 449
Score = 39.8 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 25/251 (9%), Positives = 62/251 (24%), Gaps = 16/251 (6%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSV---MN-GFREDMIKRVLGI 64
+A L + + ++ +GV+IG +++V++S+ MN GF++ +
Sbjct: 7 FKMALDNLLRRKTR------TVLTVLGVVIGTSSIVVMLSLGIAMNEGFKDQLSNMGDLT 60
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
V Y V + Q ++ S+ +
Sbjct: 61 MIDVHNYGGYDGDGRSSQSKQVHLNDDAVRRFKQIPKVQGVMATKSAYMKMAAGNMVGYV 120
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ +G + + + + G
Sbjct: 121 PIIGIDPLVMEAFGFKVAEGRILMPTDKESIVFGKNIAMNMYNPRLRNAQRGGW--GNEQ 178
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV----FVKDPDAIEKT 240
+ + +Y + + V G+ + F +
Sbjct: 179 PQVNLISNRLELTTNMEYGEVRNVGQETDQSYTPPKPHNVQGVGILEESFSEKDYNAYMN 238
Query: 241 HENIVRILGNG 251
+ +IL
Sbjct: 239 ITALEKILEED 249
>gi|118581636|ref|YP_902886.1| hypothetical protein Ppro_3235 [Pelobacter propionicus DSM 2379]
gi|118504346|gb|ABL00829.1| protein of unknown function DUF214 [Pelobacter propionicus DSM
2379]
Length = 408
Score = 39.8 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 37/262 (14%), Positives = 92/262 (35%), Gaps = 15/262 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +A R L +N+ +F ++ +G++IG+ A+I +M+V +G + +++
Sbjct: 1 MNFPQTLRIALRALRTNKMRSF------LTMLGIIIGIAAVIAMMAVGSGASYVISQQIA 54
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
I ++++ + ++ V + +
Sbjct: 55 SIGSNIILVIPGSTTSGGLRSGSGGAQSLTSDDAKAIINECPSVETAAPTVRSSGLVVYG 114
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
N ++S + S ++ + I +D+ + + + + +G P+G
Sbjct: 115 NMNWSTIIMGASPELFDIREWWTSSGRGITRQDVDGAAKVCLLGQTVADNLFGSDDPLGK 174
Query: 183 GIRSKSYTVL------GMFRMRFPDYDNGMVYMSLQEAQLYF---NLENAVSGIEVFVKD 233
+R K + + V++ L+ AQ N V + V K
Sbjct: 175 IVRIKKIPFTVVGVLERKGQSPQGTDQDDTVFVPLRTAQRNLVRSPFPNTVGALLVKAKS 234
Query: 234 PDAIEKTHENIVRILGNGVVVI 255
D +E+ E + +L +
Sbjct: 235 EDLLEQAEEEVNSLLNQRHRIT 256
>gi|312885437|ref|ZP_07745077.1| protein of unknown function DUF214 [Mucilaginibacter paludis DSM
18603]
gi|311302087|gb|EFQ79116.1| protein of unknown function DUF214 [Mucilaginibacter paludis DSM
18603]
Length = 848
Score = 39.8 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+ +AWR NR F+ I+S +++G+ AL+ + S + R+++ +
Sbjct: 10 PWLFKMAWRDSRRNRSRLFLFISS------IVLGIAALVAIYSFGDNLRQNIDDQ 58
>gi|255600534|ref|XP_002537479.1| conserved hypothetical protein [Ricinus communis]
gi|223516200|gb|EEF24903.1| conserved hypothetical protein [Ricinus communis]
Length = 165
Score = 39.8 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
AW + +NR F ++ +G++IGV A++++M++ G + + + + H
Sbjct: 5 AWHAMGANRLRTF------LTMLGMVIGVGAVVLMMAIGQGAEASVKRSISAMGSH 54
>gi|261407189|ref|YP_003243430.1| hypothetical protein GYMC10_3383 [Paenibacillus sp. Y412MC10]
gi|261283652|gb|ACX65623.1| protein of unknown function DUF214 [Paenibacillus sp. Y412MC10]
Length = 863
Score = 39.8 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 9/39 (23%), Positives = 18/39 (46%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMS 48
+A R L N++ ++I I + ++ V L+ S
Sbjct: 6 KLAIRNLKQNKRRTLVTIIGVIISVAMVTAVATLVFSFS 44
>gi|169838494|ref|ZP_02871682.1| hypothetical protein cdivTM_15561 [candidate division TM7
single-cell isolate TM7a]
Length = 79
Score = 39.8 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 8/57 (14%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Query: 214 AQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN-GVVVIDWQQRYQIFFSCYE 269
Q+ + + I + V+ P+ +E + ++ + I W+ Q +
Sbjct: 1 MQILSDQGRVATEIGIKVEHPEKVEGILSQVRNVINSKEYGAISWKTINQNLLRAVQ 57
>gi|158521638|ref|YP_001529508.1| ABC transporter-related protein [Desulfococcus oleovorans Hxd3]
gi|158510464|gb|ABW67431.1| ABC transporter-related protein [Desulfococcus oleovorans Hxd3]
Length = 658
Score = 39.8 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 29/49 (59%), Gaps = 6/49 (12%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
A+ +FS++ +F +S +G++IGV A+I ++++ G + + +
Sbjct: 265 AFASVFSHKMRSF------LSILGILIGVAAVIAMLALGRGAKSSIEES 307
>gi|116623219|ref|YP_825375.1| hypothetical protein Acid_4126 [Candidatus Solibacter usitatus
Ellin6076]
gi|116226381|gb|ABJ85090.1| protein of unknown function DUF214 [Candidatus Solibacter
usitatus Ellin6076]
Length = 412
Score = 39.8 bits (90), Expect = 0.44, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 32/76 (42%), Gaps = 6/76 (7%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A + L ++ +F+++ +G+++ LI VMSV++G + + V +
Sbjct: 14 ALQSLRGSKLRSFLTL------LGIILATTTLIAVMSVISGMDVYIAQNVSSMGADGYRV 67
Query: 72 QKYYPLVDYQFIANRL 87
Q+ + +
Sbjct: 68 QRIVMMGFDPKKYMEM 83
>gi|226349493|ref|YP_002776607.1| putative cadmium-transporting ATPase [Rhodococcus opacus B4]
gi|226245408|dbj|BAH55755.1| putative cadmium-transporting ATPase [Rhodococcus opacus B4]
Length = 750
Score = 39.8 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 9/54 (16%), Positives = 21/54 (38%), Gaps = 4/54 (7%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIG----VMALIVVMSVMNGFREDMIKRV 61
A R L +R+ ++ + + + +G L ++ S+ G + R
Sbjct: 77 ALRNLLRHRRIGVGTLMTIAAIGAIALGQIPEAAMLGILFSIAEGLEHYAVTRT 130
>gi|94968534|ref|YP_590582.1| ABC efflux pump, inner membrane subunit [Candidatus Koribacter
versatilis Ellin345]
gi|94550584|gb|ABF40508.1| ABC efflux pump, inner membrane subunit [Candidatus Koribacter
versatilis Ellin345]
Length = 412
Score = 39.8 bits (90), Expect = 0.45, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 26/62 (41%), Gaps = 9/62 (14%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
E IVA RY S ++ +G+ G+ ++++++ NGF + +
Sbjct: 7 EAIVALRYNRRR---------SMLTMLGMAWGIATVVLLLAYGNGFGQAIENIFASFGMK 57
Query: 68 VV 69
+
Sbjct: 58 TM 59
>gi|296271220|ref|YP_003653852.1| hypothetical protein Tbis_3269 [Thermobispora bispora DSM 43833]
gi|296094007|gb|ADG89959.1| protein of unknown function DUF214 [Thermobispora bispora DSM
43833]
Length = 417
Score = 39.8 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
A R L +N+ S ++ +G++IGV A+I++++V G + + + + + + +
Sbjct: 10 ALRGLTANKLR------SALTTLGILIGVAAVILLVAVGEGSSQRIRENIQRLGANTL 61
>gi|77465375|ref|YP_354878.1| ABC efflux transporter, inner membrane subunit [Rhodobacter
sphaeroides 2.4.1]
gi|126463778|ref|YP_001044891.1| hypothetical protein Rsph17029_3019 [Rhodobacter sphaeroides ATCC
17029]
gi|221369375|ref|YP_002520471.1| ABC efflux transporter, inner membrane subunit [Rhodobacter
sphaeroides KD131]
gi|77389793|gb|ABA80977.1| ABC efflux transporter, inner membrane subunit [Rhodobacter
sphaeroides 2.4.1]
gi|126105589|gb|ABN78119.1| protein of unknown function DUF214 [Rhodobacter sphaeroides ATCC
17029]
gi|221162427|gb|ACM03398.1| ABC efflux transporter, inner membrane subunit [Rhodobacter
sphaeroides KD131]
Length = 401
Score = 39.8 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 36/248 (14%), Positives = 79/248 (31%), Gaps = 12/248 (4%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A + N+ +F ++ +GV+IGV A+I +++V G + V + +V+
Sbjct: 10 FIA---IVRNKLRSF------LTVLGVVIGVAAVIAMVTVGQGSSAQVSANVASLGTNVL 60
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
I + ++ F ++ L + VS +S V+ + +
Sbjct: 61 ILRPGKRMMGPGTRDTSPAFTLRDVEALEELPVIRAVSPNTSASQTVVYGNANATTSITG 120
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKD---LARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ N R + + P G +
Sbjct: 121 TTAAYLTVANWVLAGGRVFTQAEERQGAAVCILGETVRQKLFGAADPLGQTVRIKSISCL 180
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ F + +V M ++ Q VSG+ V ++D + + +I
Sbjct: 181 VVGLLEAKGAGSFGQDQDDLVLMPIRTVQRRLVGNQDVSGMSVALQDGVSATRGIRDISA 240
Query: 247 ILGNGVVV 254
+L +
Sbjct: 241 LLRERRRI 248
>gi|315634209|ref|ZP_07889498.1| ABC superfamily ATP binding cassette transporter, ABC/membrane
protein [Aggregatibacter segnis ATCC 33393]
gi|315477459|gb|EFU68202.1| ABC superfamily ATP binding cassette transporter, ABC/membrane
protein [Aggregatibacter segnis ATCC 33393]
Length = 643
Score = 39.8 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 30/250 (12%), Positives = 81/250 (32%), Gaps = 11/250 (4%)
Query: 4 FSRFEVIVAWRY----LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
FS+ +++ A+R + +++ S ++ +G++IG+ +++ V+++ NG ++ +++
Sbjct: 245 FSKDQLMEAFRMSVSAIVAHKMR------SLLTMLGIIIGITSVVSVVALGNGSQQKILE 298
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS-GVLV 118
+ GI + + D + + + D + Q+ +S G+
Sbjct: 299 NIRGIGTNTITIFNGTGFGDRRAEQMQNLTVNDANALRQQTYVQSVTPNSASSGTLIYAN 358
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
+ S + + G + ++ L K
Sbjct: 359 KAFSTTSLKGVSEESFDVEGLKLKQGRLLSAQDVAENAQVALIDESAKKAIFPYENPLGK 418
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+ R + R + +Y + + I V V +
Sbjct: 419 VVIFNKRPLRIIGVVSDRQMGGASSSLNLYAPYTTVMNRISGSKKIGSITVKVAEDVNTT 478
Query: 239 KTHENIVRIL 248
+ I +L
Sbjct: 479 AAEKGITELL 488
>gi|295085310|emb|CBK66833.1| ABC-type antimicrobial peptide transport system, permease component
[Bacteroides xylanisolvens XB1A]
Length = 419
Score = 39.8 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 25/225 (11%), Positives = 62/225 (27%), Gaps = 8/225 (3%)
Query: 20 RKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVD 79
++N + + + V G+ LIV++ NG + + + +
Sbjct: 13 KRNKLRTFLTGFA---VAWGIFMLIVLLGAGNGLIHAFEQSASERAMNSIKIFPGWTSKS 69
Query: 80 YQ--FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFY 137
Y R+ + + ++ G + S + +
Sbjct: 70 YDGLKEGRRVQLDNKDVDATDHYFPDHVIKAGATVWQGGINLSFGQEYVSLNLSGVYPNH 129
Query: 138 GNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGM--- 194
V I D+ + + K + +G + V+
Sbjct: 130 TEVEVVKLFKGRFINEIDIKERRKVIVLHKKTAEILFDKTHTEPIGQFVNAGNVVYQVVG 189
Query: 195 FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
D + Y+ Q +N + ++ + + K+ + IE
Sbjct: 190 LYNDKGDSGDSDAYIPFTTLQTIYNKGDKLNNLVMTTKNLETIEA 234
>gi|255532464|ref|YP_003092836.1| hypothetical protein Phep_2570 [Pedobacter heparinus DSM 2366]
gi|255345448|gb|ACU04774.1| protein of unknown function DUF214 [Pedobacter heparinus DSM
2366]
Length = 413
Score = 39.8 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 36/95 (37%), Gaps = 8/95 (8%)
Query: 1 MSIFSRF--EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMI 58
M IF A L N+ + +S +G+ IG+ A+I V S + FR +
Sbjct: 1 MIIFRLIGESFRFAADALRQNKLR------TMLSLLGITIGIFAIIFVFSAADTFRSKLQ 54
Query: 59 KRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDV 93
+ + + + QK+ + + P+
Sbjct: 55 ESIDKLGSKTIFVQKWPWGGFGDYPWWKYVNRPEP 89
>gi|114567229|ref|YP_754383.1| hypothetical protein Swol_1714 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114338164|gb|ABI69012.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 791
Score = 39.8 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 29/240 (12%), Positives = 66/240 (27%), Gaps = 24/240 (10%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++ R +F NR +S+ IS VV+ V + F D ++ N
Sbjct: 421 SWKMSLRSIFRNRGRFAVSVLGIISS-----------VVLLVFSCFSLDATDYLMNQNFE 469
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + Y + + +V L +GG + +
Sbjct: 470 QINRYDYMIRFTEPIKYSEILDWTRWDEVQRMEPMMELPVKLHAGGESKDEVLLGMIPSN 529
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
L+ D + I + + ++ + + T +G+G
Sbjct: 530 RLK---------RVYDKLGQERQIPEEGILLGKRVADKLGLQLGDEVVVETTLGIGPSRS 580
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
S ++ Y+S + S + + + D + + +
Sbjct: 581 SRLIVMGI---NEPMTGSGSYVSFSTVNSLLGEQELASAVLLKL-DAAQMPSVENRLQEM 636
>gi|317488511|ref|ZP_07947061.1| hypothetical protein HMPREF1023_00759 [Eggerthella sp. 1_3_56FAA]
gi|325831897|ref|ZP_08164994.1| putative macrolide export ATP-binding/permease protein MacB
[Eggerthella sp. HGA1]
gi|316912383|gb|EFV33942.1| hypothetical protein HMPREF1023_00759 [Eggerthella sp. 1_3_56FAA]
gi|325486218|gb|EGC88670.1| putative macrolide export ATP-binding/permease protein MacB
[Eggerthella sp. HGA1]
Length = 397
Score = 39.4 bits (89), Expect = 0.48, Method: Composition-based stats.
Identities = 32/255 (12%), Positives = 83/255 (32%), Gaps = 19/255 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
W L +N+ +F ++ +G++IG+ A+I + S++ G + ++ +
Sbjct: 7 FYETWHALSANKGRSF------LTILGIVIGIAAVIAMTSLIAGVQNMLMGEMGLSQARQ 60
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
V Y P ++L+ +V+ S + ++ G + D+
Sbjct: 61 VSISAYSPQGITFDDLDKLEQGMPEYEVITGASYASAEITMADGQKNHATVIGARPDYFT 120
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ + + ++ ++ +G + P + + + +
Sbjct: 121 ANGTKLKEGRFFTESEEQNAARLV------VMGGGEMTVQMLGVPDTEAVGKTVRLGNDD 174
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV--- 245
YTV+G+ G Y + + + I F ++ +++ E
Sbjct: 175 YTVIGVLETSSFMGGGGTFYAPYTTVETRIGNASGIQQIVGFAREGTDMDRLVETTQTFV 234
Query: 246 ----RILGNGVVVID 256
+ V V
Sbjct: 235 AQYFNLEPENVYVSS 249
>gi|237713897|ref|ZP_04544378.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262409194|ref|ZP_06085738.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294645770|ref|ZP_06723455.1| efflux ABC transporter, permease protein [Bacteroides ovatus SD CC
2a]
gi|294810310|ref|ZP_06768972.1| efflux ABC transporter, permease protein [Bacteroides xylanisolvens
SD CC 1b]
gi|298482281|ref|ZP_07000468.1| ABC transporter, putative permease [Bacteroides sp. D22]
gi|229446053|gb|EEO51844.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262352941|gb|EEZ02037.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638901|gb|EFF57234.1| efflux ABC transporter, permease protein [Bacteroides ovatus SD CC
2a]
gi|294442509|gb|EFG11314.1| efflux ABC transporter, permease protein [Bacteroides xylanisolvens
SD CC 1b]
gi|298271568|gb|EFI13142.1| ABC transporter, putative permease [Bacteroides sp. D22]
Length = 419
Score = 39.4 bits (89), Expect = 0.48, Method: Composition-based stats.
Identities = 25/225 (11%), Positives = 62/225 (27%), Gaps = 8/225 (3%)
Query: 20 RKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVD 79
++N + + + V G+ LIV++ NG + + + +
Sbjct: 13 KRNKLRTFLTGFA---VAWGIFMLIVLLGAGNGLIHAFEQSASERAMNSIKIFPGWTSKS 69
Query: 80 YQ--FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFY 137
Y R+ + + ++ G + S + +
Sbjct: 70 YDGLKEGRRVQLDNKDVDATDHYFPDHVIKAGATVWQGGINLSFGQEYVSLNLSGVYPNH 129
Query: 138 GNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGM--- 194
V I D+ + + K + +G + V+
Sbjct: 130 TEVEVVKLFKGRFINEIDIKERRKVIVLHKKTAEILFDKTHTEPIGQFVNASNVVYQVVG 189
Query: 195 FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
D + Y+ Q +N + ++ + + K+ + IE
Sbjct: 190 LYNDKGDSGDSDAYIPFTTLQTIYNKGDKLNNLVMTTKNLETIEA 234
>gi|319955499|ref|YP_004166766.1| hypothetical protein Celal_4024 [Cellulophaga algicola DSM 14237]
gi|319424159|gb|ADV51268.1| protein of unknown function DUF214 [Cellulophaga algicola DSM
14237]
Length = 406
Score = 39.4 bits (89), Expect = 0.49, Method: Composition-based stats.
Identities = 9/66 (13%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ ++++ + N+ + ++ +GV+IGV ++I ++++ G ++ + ++ + ++
Sbjct: 7 LKISFKAIILNKVR------ALLTMLGVIIGVASVIAMLAIGEGSKQSIKTQISNMGSNM 60
Query: 69 VIQQKY 74
+ + Y
Sbjct: 61 ITIRPY 66
>gi|153806091|ref|ZP_01958759.1| hypothetical protein BACCAC_00342 [Bacteroides caccae ATCC 43185]
gi|149130768|gb|EDM21974.1| hypothetical protein BACCAC_00342 [Bacteroides caccae ATCC 43185]
Length = 419
Score = 39.4 bits (89), Expect = 0.49, Method: Composition-based stats.
Identities = 25/225 (11%), Positives = 62/225 (27%), Gaps = 8/225 (3%)
Query: 20 RKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVD 79
++N + + + V G+ LIV++ NG + + + +
Sbjct: 13 KRNKLRTFLTGFA---VAWGIFMLIVLLGAGNGLIHAFEQSASERAMNSIKIFPGWTSKS 69
Query: 80 YQ--FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFY 137
Y R+ + ++ + G + S + +
Sbjct: 70 YDGLKEGRRVQLDNKDVDATNRYFPDHVINTGGTVWQGGVNLSFGQEYVSLSLSGVYPNH 129
Query: 138 GNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGM--- 194
V I D+ + + K + +G + V+
Sbjct: 130 TEVEVVKLFKGRFINEIDIRERRKVIVLHKKTAEILFDKTHTDPIGQFVNAGNVVYQVVG 189
Query: 195 FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
D + Y+ Q +N + ++ + + K+ + IE
Sbjct: 190 LYNDKGDSGDSDAYIPFSTLQTIYNKGDKLNNLIMTTKNLETIEA 234
>gi|94267413|ref|ZP_01290871.1| Protein of unknown function DUF214 [delta proteobacterium MLMS-1]
gi|93452018|gb|EAT02718.1| Protein of unknown function DUF214 [delta proteobacterium MLMS-1]
Length = 412
Score = 39.4 bits (89), Expect = 0.49, Method: Composition-based stats.
Identities = 27/246 (10%), Positives = 75/246 (30%), Gaps = 16/246 (6%)
Query: 36 VMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIK 95
+ IGV+ +++ ++V F+ MI + + K + + + L+ + +
Sbjct: 26 IAIGVIFVLLFVAVTGSFKNLMIAQTTDSMLGHLQVHKRGYVASIENLPLNLNLSGEALN 85
Query: 96 VLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFD------RGKG 149
+ + + S + + + ++ + ++ G+
Sbjct: 86 RVEEMLERRPEVATFSPRLKFGAMFSTFVETTNIRLNGIDPERELATVPLLAGRLLEGEP 145
Query: 150 VIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYM 209
+ L ++ G + + V G + + Y+
Sbjct: 146 ELAPGQLWVPELLARGMGVKMGDTVVVVATNQDGSVNGRQLTVDGILESATGPGGRDGYL 205
Query: 210 SLQEAQLYFNLEN-AVSGIEVFVKDPDAIEKTHENIVRILGNG--------VVVIDWQQR 260
+ +A LE +S I V + D D + + + L + W++
Sbjct: 206 HIDDAAAILRLEQREISEIAVRLDDFDRLPAVAAALEQELAPHTTPQGRPLYELHTWERL 265
Query: 261 YQIFFS 266
F++
Sbjct: 266 -SPFYN 270
>gi|146299428|ref|YP_001194019.1| hypothetical protein Fjoh_1668 [Flavobacterium johnsoniae UW101]
gi|146153846|gb|ABQ04700.1| protein of unknown function DUF214 [Flavobacterium johnsoniae
UW101]
Length = 414
Score = 39.4 bits (89), Expect = 0.49, Method: Composition-based stats.
Identities = 34/232 (14%), Positives = 71/232 (30%), Gaps = 10/232 (4%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
+ NR F++ S S G+ L++++ G + + K+ ++
Sbjct: 14 ISKNRLRTFLTGISVAS------GIFILVILLGAGKGLQNGIEKQFERDAAGIIEVWSGT 67
Query: 76 PLVDYQ--FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSF 133
+Y+ ++ F S+ SY
Sbjct: 68 TTKEYKGLNPGRQVQFRNSDYNQSTQKFEDKLDLRASTQNYWGQSFSYGKESGSYQFRGV 127
Query: 134 SRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM--GIRSKSYTV 191
YG + N + KDL N +++ D +G I + S+ V
Sbjct: 128 DPDYGGIENLTIVQGRYVNSKDLQNNEKVAVIGMKLKNDLLKDKDAIGEEILINNISFKV 187
Query: 192 LGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+G+F + + Y+ L Q F + +S + +K ++
Sbjct: 188 IGVFTDPGGEREETRAYLPLTTVQRTFGGGDKISNLFFTLKKTSNYDEALAQ 239
>gi|317501857|ref|ZP_07960042.1| hypothetical protein HMPREF1026_01986 [Lachnospiraceae bacterium
8_1_57FAA]
gi|331088630|ref|ZP_08337541.1| hypothetical protein HMPREF1025_01124 [Lachnospiraceae bacterium
3_1_46FAA]
gi|316896747|gb|EFV18833.1| hypothetical protein HMPREF1026_01986 [Lachnospiraceae bacterium
8_1_57FAA]
gi|330407587|gb|EGG87087.1| hypothetical protein HMPREF1025_01124 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 473
Score = 39.4 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 6/44 (13%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
L + F ++ +GV+IG +++V++S+ G +E M K
Sbjct: 14 LRRRKLRTF------LTVLGVVIGTASIVVMISLGLGLQESMYK 51
>gi|220919388|ref|YP_002494692.1| protein of unknown function DUF214 [Anaeromyxobacter dehalogenans
2CP-1]
gi|219957242|gb|ACL67626.1| protein of unknown function DUF214 [Anaeromyxobacter dehalogenans
2CP-1]
Length = 420
Score = 39.4 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 35/82 (42%), Gaps = 6/82 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
V +A L R +F ++ +G++IGVM +I +++++ G ++ + +
Sbjct: 18 SVRIALESLIGARLRSF------LTTLGIVIGVMTVIAIVAIIQGLNRSFEGQIANLGAN 71
Query: 68 VVIQQKYYPLVDYQFIANRLDF 89
+ K+ L + +
Sbjct: 72 TLYVSKFAWLAQGRGEWWEMRN 93
>gi|73670125|ref|YP_306140.1| ABC transporter permease [Methanosarcina barkeri str. Fusaro]
gi|72397287|gb|AAZ71560.1| ABC transporter, permease protein [Methanosarcina barkeri str.
Fusaro]
Length = 401
Score = 39.4 bits (89), Expect = 0.52, Method: Composition-based stats.
Identities = 32/260 (12%), Positives = 86/260 (33%), Gaps = 13/260 (5%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFR---EDMIKRV 61
+R +A R + K + + + + + L++ S++ G +++
Sbjct: 5 ARVSFFLASRSMTRGNKG-----ITIFTIFVLTLIFIQLVLFSSMLAGVTLKFNELMVNF 59
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
N V +++ + D + +++ +P V+ + +
Sbjct: 60 QTGNVVVEPKEEERYIEDVSALQKKIESLPQVVGTSARLKMTGNFRYKEKEIGATVYGID 119
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ + VI+G++++ G + + GD +
Sbjct: 120 PADEIF-VTGLEDAIISGEFLSRPDKGEVILGREVSGGFGALMESRSLGGVEVGDTVELT 178
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA--VSGIEVFVKDPDAIEK 239
+G ++ + V G++ R+ D Y++ + + +E I V D +
Sbjct: 179 IGGVTREFRVKGIYTTRYFMADAS-AYLTRADLEEMLGIEGRDLAQEIAVKTADGTPEDD 237
Query: 240 THENIVRILGNGVVVIDWQQ 259
T ++ LG + W +
Sbjct: 238 TRTALLS-LGISENIRTWHE 256
>gi|296132812|ref|YP_003640059.1| protein of unknown function DUF214 [Thermincola sp. JR]
gi|296031390|gb|ADG82158.1| protein of unknown function DUF214 [Thermincola potens JR]
Length = 410
Score = 39.4 bits (89), Expect = 0.53, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ R +++ LF N+ +F ++ +G++IG+ ++I++ S+ G + + +V
Sbjct: 1 MRIRETFRSSFKSLFHNKLRSF------LTMLGIIIGIFSVIMLTSIGEGVKHQVTSQVE 54
Query: 63 GINGHVVIQQKYYPLVDYQFIA 84
+ +++ + Q A
Sbjct: 55 SLGANLLYVFPGKIEIGPQKAA 76
>gi|226226551|ref|YP_002760657.1| putative ABC transporter permease protein [Gemmatimonas aurantiaca
T-27]
gi|226089742|dbj|BAH38187.1| putative ABC transporter permease protein [Gemmatimonas aurantiaca
T-27]
Length = 415
Score = 39.4 bits (89), Expect = 0.53, Method: Composition-based stats.
Identities = 40/286 (13%), Positives = 90/286 (31%), Gaps = 28/286 (9%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNG----FRED 56
M F + +A + + + + S + +GV IGVM LI V+S++ G +D
Sbjct: 1 MPFFE--AIRLALSTIRTQK------LKSAFTLLGVCIGVMFLISVVSIVEGMGRYMEDD 52
Query: 57 MIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
++ +++G+N V + + D I++ + + ++
Sbjct: 53 LVGKLIGLNTFEVRNRPNINIGDVDAATWEEYRRRPRIEITDVEPVTSALPADANWYIVS 112
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK--------- 167
+ +++ S + + GV G+ L+
Sbjct: 113 DGQVTASTTVSGKPRQVQVSAVDGDYFNMKKLGVSEGRVLSEQELSRGEKVAVIGIDAAK 172
Query: 168 --INILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFN-LENAV 224
L P +G ++ DN +V + N N V
Sbjct: 173 RLFPGLDPVDREVRLGGVPYRIVGIAETQGQIFGMSMDNFLVTTWRSPVRRLVNPRPNIV 232
Query: 225 SGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
I + + A+ +T E++ + + + F ++
Sbjct: 233 DAIAIQLPSEPAMRETMEDVRAAMRANRRLRP--AQKDNF--ALQT 274
>gi|225155420|ref|ZP_03723912.1| protein of unknown function DUF214 [Opitutaceae bacterium TAV2]
gi|224803876|gb|EEG22107.1| protein of unknown function DUF214 [Opitutaceae bacterium TAV2]
Length = 415
Score = 39.4 bits (89), Expect = 0.53, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 37/91 (40%), Gaps = 6/91 (6%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A+ + +N+ S ++ +GV+IG++A+ ++ + +NG + + G
Sbjct: 11 ALRIAFTQIHANKMR------SALTALGVVIGIVAVTLMGTAINGIDAGVDRSFAGFGDD 64
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLP 98
V+ ++ + R +
Sbjct: 65 VLYVCQWPWRDVDDWWVYRNRRSIKIPDAAH 95
>gi|119492075|ref|ZP_01623528.1| Macrolide specific ABC-type transporter, ATP-binding protein
[Lyngbya sp. PCC 8106]
gi|119453285|gb|EAW34450.1| Macrolide specific ABC-type transporter, ATP-binding protein
[Lyngbya sp. PCC 8106]
Length = 392
Score = 39.4 bits (89), Expect = 0.53, Method: Composition-based stats.
Identities = 27/232 (11%), Positives = 68/232 (29%), Gaps = 6/232 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +GV +GV A+ + V + + + +++ N V + Q IA L+
Sbjct: 23 SSLTIVGVFMGVAAVSATLQVRSISQAVIAQQLAERNAPQVGLVPQRNRITRQRIAFTLE 82
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
I + + L + ++ + S + + + + N R
Sbjct: 83 DIEFLKRRLKQAKAISGINWMRSSLVVFQDKEATPNMIAVAPNHL--ETSGQQLVAGRAF 140
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ + I + + V + + G V+
Sbjct: 141 NSTDYQSFRPVVMIDEYLAKQLFQQQNPLGQNLYIDLKPYSVVGILPTSAENEEPEGEVW 200
Query: 209 MSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVV---VIDW 257
M+ + I + + + ++ E +++L W
Sbjct: 201 MTTAFQSTISG-NYTIRSILIRPQKLEDLQSLEEQAIQLLEQRYKGSQFWSW 251
>gi|255655478|ref|ZP_05400887.1| ABC transporter, permease protein [Clostridium difficile QCD-23m63]
gi|296451470|ref|ZP_06893207.1| ABC superfamily ATP binding cassette transporter, permease protein
[Clostridium difficile NAP08]
gi|296880181|ref|ZP_06904147.1| ABC superfamily ATP binding cassette transporter, permease protein
[Clostridium difficile NAP07]
gi|296259737|gb|EFH06595.1| ABC superfamily ATP binding cassette transporter, permease protein
[Clostridium difficile NAP08]
gi|296428770|gb|EFH14651.1| ABC superfamily ATP binding cassette transporter, permease protein
[Clostridium difficile NAP07]
Length = 853
Score = 39.4 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 28/254 (11%), Positives = 77/254 (30%), Gaps = 13/254 (5%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++++ + RYL N++ ++I G+++ + + ++ F + ++
Sbjct: 1 MNLYTSLTI----RYLKQNKRRTIVTII------GIILSTALICGIGNIFESFMDYQVRE 50
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ +G + + +++ + S
Sbjct: 51 TIKNDGSFHVTFYDVNRKNVEYVTKSAEVEKYAFTKQLGYSKLENSENGIVSIKQYDKNA 110
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
I+ S + F G + + + + + + +GD + D
Sbjct: 111 INGYKISIKEGRFPAKEGEIVLSENIINLIDDNLKIGDKITLKVGDMFDSSKKKIDSMVF 170
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVS---GIEVFVKDPDAI 237
G S + Y + A YFN + + + V V++P +
Sbjct: 171 HEGDYIASEKDRTFEVVGIIKKPGFERYNGIATAITYFNPMDNYNDTINVSVEVRNPKEV 230
Query: 238 EKTHENIVRILGNG 251
+ I + + +
Sbjct: 231 YEVSNKISKNIYSN 244
>gi|229105573|ref|ZP_04236207.1| ABC transporter, permease component [Bacillus cereus Rock3-28]
gi|228677843|gb|EEL32086.1| ABC transporter, permease component [Bacillus cereus Rock3-28]
Length = 846
Score = 39.4 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 30/224 (13%), Positives = 69/224 (30%), Gaps = 17/224 (7%)
Query: 27 IASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANR 86
+ + + +GVM+ M L+ SV +E ++ R + ++ +
Sbjct: 10 LIALGAALGVMLATMLLLGNQSVEQSVKEQVVSRY--GDYNLQFGYIKNDMYLNNESLKG 67
Query: 87 LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDR 146
+D + + K+ + F G +S + Y +
Sbjct: 68 IDGLENAEKISKALIPYPFPHYKELSGKPSYWGVEQDSPEMHSYKILEGRYPKEGAEVAL 127
Query: 147 GKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGM 206
KG +++ I + K+ V+G+
Sbjct: 128 TKGYTDRENIRVGDTIKLPFP---------------QHGEKTVKVVGILNPPLMASMGHS 172
Query: 207 VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN 250
Y + Q NL N + ++V V+D + + ++ + + N
Sbjct: 173 AYFPIHWLQKELNLPNQFNLVQVKVQDVNVKKAIAFDVHKKIEN 216
>gi|189220453|ref|YP_001941093.1| ABC-type antimicrobial peptide transport system, permease component
[Methylacidiphilum infernorum V4]
gi|189187311|gb|ACD84496.1| ABC-type antimicrobial peptide transport system, permease component
[Methylacidiphilum infernorum V4]
Length = 827
Score = 39.4 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 21/270 (7%), Positives = 66/270 (24%), Gaps = 22/270 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M+ + + + ++I++ ++ + ++I V +I
Sbjct: 438 MARPRNVIFKLILSHFNRSMHRNALTISALLTALAMVISVSVMITS-------------- 483
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSG--GSGVLV 118
H V + F+ + + +VL + +
Sbjct: 484 ----FRHTVNGWLKQSVRADLFVTTAANLASGIHQVLSPSVEEVIAADNRIEAIDRYYEF 539
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
R + + + +N R A ++
Sbjct: 540 RSEFRNSPIKISSISFAVAAGRNNLEFRTGNPEKLFREAAGSNRIFINESLSRKFNLKEK 599
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+ + + + + ++ F + + +++KDP
Sbjct: 600 DRLSLKTDRGMVDFEILGVFKDFTTEFGLVLVDRQTLNKFWNQKGSHSLALYLKDPGKSA 659
Query: 239 KTHENIVRIL--GNGVVVIDWQQRYQIFFS 266
+ + + L +V ++ F
Sbjct: 660 VVKKELDQKLCSMGDYIVYSNEELRNEIFR 689
>gi|56751433|ref|YP_172134.1| ABC transporter permease [Synechococcus elongatus PCC 6301]
gi|81298891|ref|YP_399099.1| ABC transporter permease [Synechococcus elongatus PCC 7942]
gi|56686392|dbj|BAD79614.1| probable ABC transporter permease protein [Synechococcus elongatus
PCC 6301]
gi|81167772|gb|ABB56112.1| probable ABC transporter permease protein [Synechococcus elongatus
PCC 7942]
Length = 407
Score = 39.4 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 36/263 (13%), Positives = 83/263 (31%), Gaps = 14/263 (5%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
MS+ + +A + L +NR S ++ +G++IG ++I ++ V G + ++
Sbjct: 1 MSVDWSESLSMAVKTLRANRLR------SALTMLGIIIGNASVITMVGVGQGAQRLASEQ 54
Query: 61 VLGINGHVVIQQKYYPLVDY---QFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVL 117
+ +V+ + I +G+ +
Sbjct: 55 FESLGPNVLFIVPGNQDTRRGGLDIPKTLVLADAVAIATQVPTAGEVAPQVSTRQLVTYQ 114
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
+ F + + +V+ + + LG + K+ +
Sbjct: 115 GESSTTQVFGVTPSFLTVRSFSVARGRFFSDLDLSRAEQVAVLGSDLAIKLFGVQNPVGA 174
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQE-AQLYFNLEN----AVSGIEVFVK 232
+ G + V+ + + VY+ L + + VS I V K
Sbjct: 175 SIRIKGASFRVIGVMEPKGSFLGNNQDDAVYLPLTTVSSRILGTTSPYGIEVSFISVAAK 234
Query: 233 DPDAIEKTHENIVRILGNGVVVI 255
D ++I+ I +L +I
Sbjct: 235 DANSIDAAQFQITNLLRQRHRII 257
>gi|284035867|ref|YP_003385797.1| hypothetical protein Slin_0947 [Spirosoma linguale DSM 74]
gi|283815160|gb|ADB36998.1| protein of unknown function DUF214 [Spirosoma linguale DSM 74]
Length = 805
Score = 39.4 bits (89), Expect = 0.55, Method: Composition-based stats.
Identities = 37/253 (14%), Positives = 79/253 (31%), Gaps = 23/253 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMA-LIVVMSVMNGFREDMIKRVLGINGH 67
+AWR L N+ + S I+ G+ +G+ L++ + V F E +
Sbjct: 6 FKIAWRNLVKNK------VYSAINIFGLAVGLTTCLLITLYV---FDERSYDKHHNHANQ 56
Query: 68 VVIQQKYYPLVDYQFIANR-----LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ ++ A P+V +V + L +
Sbjct: 57 LYRVNTKTKEQNWAATAAPTALGLKTDFPEVEQVTRLLKVPNMDKMLLRYTYKNQQKNFF 116
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
++ Y+ ++F + + + L + +S +P G V +G+
Sbjct: 117 ETNGYYVDSTFFELFTYPFKYGNPQTAINRPNTLVVSETLSNKLFGEG-NPIGKVIHVGL 175
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVY-------MSLQEAQLYFNLENAVSGIEVFVKDPD 235
+YTV G+F + + + M Q N + + +KD
Sbjct: 176 PFGDFNYTVSGVFSDTHKSHIDAHFFLSMQNGDMGNWVNQQKNWATNNIFYTYIKLKDGV 235
Query: 236 AIEKTHENIVRIL 248
++ + L
Sbjct: 236 NVQAFEAKLPAFL 248
>gi|295136453|ref|YP_003587129.1| ABC transporter permease [Zunongwangia profunda SM-A87]
gi|294984468|gb|ADF54933.1| putative ABC transporter permease [Zunongwangia profunda SM-A87]
Length = 787
Score = 39.4 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 15/133 (11%), Positives = 50/133 (37%), Gaps = 13/133 (9%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMA-LIVVMSV-----MNGFRED 56
+ + + +AWR ++ N+ +F++ G+ +G+ +++++ V M+ F +D
Sbjct: 1 MLKNY-IKIAWRNIWKNKGFSFLN------IFGLALGMAVTMLILLMVNHERNMDTFHKD 53
Query: 57 MIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
+ + + N + + +A + I++ + + S +
Sbjct: 54 LDQLYVLGNKGKWNDKTEVWFYTPKPLATAIQNNFPEIELTSRLLNSNDLLFSKGENSLI 113
Query: 117 LVRGISNSDFSYL 129
+ + +
Sbjct: 114 PSGAFIDPHYLEM 126
>gi|167957537|ref|ZP_02544611.1| ABC superfamily ATP binding cassette transporter, membrane protein
[candidate division TM7 single-cell isolate TM7c]
Length = 411
Score = 39.4 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 26/254 (10%), Positives = 60/254 (23%), Gaps = 19/254 (7%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A L SN+ + ++ +G+ +GV + +M++ G + + +V +NG+++I
Sbjct: 12 ARESLRSNKLR------TRLTVLGITLGVACMTTIMAMGFGVSQLIDSQVSRLNGNIIIV 65
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGG-------------SGVLV 118
+ F I + P G
Sbjct: 66 RPGSNKSTDYFKQITESQISNAFTASPLTEKDLQAIQKVDGVEKVAPLMSVGGSLKTQHN 125
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
+ V G + +
Sbjct: 126 TISDAPIIATTPELKDISQLEVHEGQFIGSVSGTNTAVVGRQMSIDLFGTDNPIGQTFKI 185
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+ N V ++L + + + I + K +
Sbjct: 186 KGVSFAVIGVLKSIHETLTYNDIDFNRSVIINLASGKSFNQGIAQIKQINIQSKKEQDAK 245
Query: 239 KTHENIVRILGNGV 252
+ +NI +
Sbjct: 246 QIVQNIRDAISKEH 259
>gi|325479087|gb|EGC82187.1| efflux ABC transporter, permease protein [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 458
Score = 39.4 bits (89), Expect = 0.57, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 27/61 (44%), Gaps = 8/61 (13%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M I R E +A R L + + ++ + V+IG ++I++++ G +
Sbjct: 1 MKIRDRLE--MALRNLVRRKSR------TILTILSVVIGASSIILMIAFALGINQQQKDM 52
Query: 61 V 61
+
Sbjct: 53 I 53
>gi|255039157|ref|YP_003089778.1| hypothetical protein Dfer_5420 [Dyadobacter fermentans DSM 18053]
gi|254951913|gb|ACT96613.1| protein of unknown function DUF214 [Dyadobacter fermentans DSM
18053]
Length = 784
Score = 39.4 bits (89), Expect = 0.57, Method: Composition-based stats.
Identities = 25/221 (11%), Positives = 66/221 (29%), Gaps = 14/221 (6%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + +A+R LF N+ + I+ +G+ +G+ + ++++ M V
Sbjct: 1 MLKNY-LKIAFRNLFRNKGFSAIN------ILGLSVGMASALLILFWM-------YNEVS 46
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H Y F + + P + + + +
Sbjct: 47 YDRFHTKKDYLYEAWNRGTFDGKLQCWNSTPQVLGPALKAEYPEVADVARIYSRWFVTRN 106
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
++ + DF +G + + I + DV +
Sbjct: 107 GDKKISIEAMITDPAFLSMFDFPLLQGNPANALQSVSSMIVTQKMAIRMFGTEDVLGKTI 166
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA 223
I ++T+ G+ + P+ + Y+ + +
Sbjct: 167 SIDKDNFTITGVMKDLPPNTEFRFDYILPWQYLKKIGAADE 207
>gi|305667430|ref|YP_003863717.1| hypothetical protein FB2170_14323 [Maribacter sp. HTCC2170]
gi|88709478|gb|EAR01711.1| hypothetical protein FB2170_14323 [Maribacter sp. HTCC2170]
Length = 453
Score = 39.4 bits (89), Expect = 0.57, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDM 57
A R + +N+ + ++ +G++ GV A+I ++++ G +++
Sbjct: 17 AIRVILANKVR------TLLTALGIIFGVAAVITMLAIGKGAEKEI 56
>gi|296453925|ref|YP_003661068.1| hypothetical protein BLJ_0771 [Bifidobacterium longum subsp. longum
JDM301]
gi|296183356|gb|ADH00238.1| protein of unknown function DUF214 [Bifidobacterium longum subsp.
longum JDM301]
Length = 406
Score = 39.4 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 36/86 (41%), Gaps = 6/86 (6%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
L +N+ S ++ +G++IG+ A+I + S++ G R+ ++ + +
Sbjct: 14 LRANKGK------SALTILGIVIGIAAVITMTSLIGGIRDSLVGELGMNAARTISIYTDV 67
Query: 76 PLVDYQFIANRLDFIPDVIKVLPFVS 101
+D + I + + D P
Sbjct: 68 GTLDDEQITAMREELTDYEYFSPTNY 93
>gi|257790780|ref|YP_003181386.1| hypothetical protein Elen_1025 [Eggerthella lenta DSM 2243]
gi|257474677|gb|ACV54997.1| protein of unknown function DUF214 [Eggerthella lenta DSM 2243]
Length = 397
Score = 39.4 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
W L +N+ +F ++ +G++IG+ A+I + S++ G + ++ +
Sbjct: 7 FYETWHALSANKGRSF------LTILGIVIGIAAVIAMTSLIAGVQNMLMGEM 53
>gi|255693120|ref|ZP_05416795.1| putative ABC transporter, permease protein [Bacteroides finegoldii
DSM 17565]
gi|260621162|gb|EEX44033.1| putative ABC transporter, permease protein [Bacteroides finegoldii
DSM 17565]
Length = 419
Score = 39.4 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 26/242 (10%), Positives = 64/242 (26%), Gaps = 11/242 (4%)
Query: 20 RKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVD 79
++N + + + V G+ LIV++ NG + + + +
Sbjct: 13 KRNKLRTFLTGFA---VAWGIFMLIVLLGAGNGLIHAFEESSSERALNSIKIYPGWTSKS 69
Query: 80 YQ--FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFY 137
Y ++ +++ + +S G + + S +
Sbjct: 70 YDGLKEGRKIQLDNKDLRITDTHFPDYVIKAGASIWQGTVTISFGSEYASVGLAGVFPNH 129
Query: 138 GNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGM--- 194
+ I D+ + + K + +G V
Sbjct: 130 IEIETIKLFKGRFINETDIKERRKVIVLHKKTAEILFHKTHTEPIGQFVNIGNVTYRVVG 189
Query: 195 FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK---THENIVRILGNG 251
D + Q +N + +S + + K+ + IE + + LG
Sbjct: 190 LCNDKGDSGEKPALIPFSTLQTIYNQGDKLSYLTIATKNLETIEANNNFEKEYRKALGAN 249
Query: 252 VV 253
Sbjct: 250 HR 251
>gi|22298926|ref|NP_682173.1| ABC transporter permease protein [Thermosynechococcus elongatus
BP-1]
gi|22295107|dbj|BAC08935.1| ABC transporter permease protein [Thermosynechococcus elongatus
BP-1]
Length = 405
Score = 39.4 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 29/249 (11%), Positives = 69/249 (27%), Gaps = 14/249 (5%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV--LGINGHVVIQQK 73
L +NR S ++ +G++IG A+I ++ V G + + LG N ++
Sbjct: 14 LKANRLR------SGLTMLGIIIGNAAVIAMVGVGQGAQRYAASQFESLGPNTLFIVPGT 67
Query: 74 YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSF 133
+ L + Q + +N +F
Sbjct: 68 PQARNRTSNVPQTLVLEDAKAIATQVPTVQEVAPQIQLQQRVTYRGRNTNVLIVGTTPTF 127
Query: 134 SRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLG 193
+ + + S K ++ + + S +
Sbjct: 128 PSVRSFTVAQGRFISDEDVQRHRRVVILGSDLAKKLFINENPVGQQVRIKNLSFEVIGVM 187
Query: 194 MFR-MRFPDYDNGMVYMSLQEAQLYF-----NLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ + + Y+ + +++ I V +D +I+ I +
Sbjct: 188 AEKGAFLGNNQDEAAYIPITTMSSRIVGQRSPYGISLTFISVSARDEQSIDAAKFQITNL 247
Query: 248 LGNGVVVID 256
L ++D
Sbjct: 248 LRLRHQIVD 256
>gi|325263507|ref|ZP_08130241.1| putative permease [Clostridium sp. D5]
gi|324031216|gb|EGB92497.1| putative permease [Clostridium sp. D5]
Length = 465
Score = 39.4 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 11/45 (24%), Positives = 24/45 (53%), Gaps = 6/45 (13%)
Query: 15 YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
L + F ++ +GV+IG +++V++S+ G +E M +
Sbjct: 5 NLKRRKLRTF------LTILGVVIGTASIVVMISLGLGMQESMYR 43
>gi|114567964|ref|YP_755118.1| hypothetical protein Swol_2458 [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
gi|114338899|gb|ABI69747.1| conserved hypothetical protein [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 394
Score = 39.4 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
++VA + SN+ +F ++ +G++IG+ A+I V+ + G R +++ + ++
Sbjct: 7 ILVAIESIKSNKLRSF------LTTLGIVIGIAAVIAVVGIGQGGRAMLMQEMEKFGTNM 60
Query: 69 VIQQKYY 75
Y
Sbjct: 61 FGIWVNY 67
>gi|254479354|ref|ZP_05092691.1| efflux ABC transporter, permease protein [Carboxydibrachium
pacificum DSM 12653]
gi|214034720|gb|EEB75457.1| efflux ABC transporter, permease protein [Carboxydibrachium
pacificum DSM 12653]
Length = 402
Score = 39.4 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 39/256 (15%), Positives = 89/256 (34%), Gaps = 15/256 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ VA + SN+ F ++ +G++IG+ ++I ++S+ G ++ ++
Sbjct: 1 MYIWEAFKVAIESILSNKLRTF------LTMLGIIIGIASVITIVSLGAGGQKAILGEFE 54
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
I +V + + + L + + K LP V A V+ +
Sbjct: 55 KIGVNVFSIKMRNDVDIREGDRLTLRDVEMIRKRLPSVKYAAPVAEKMGLAKTEKYTKRA 114
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + F K +++G+++ S + G +G
Sbjct: 115 LFIGTDFDYGNISSLKVIHGRFLNEKDILLGRNVILIDKDSAIELFGYEDCVGKSIKIGT 174
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMV--------YMSLQEAQLYFNLENAVSGIEVFVKDP 234
+ ++G+ G + + + AQ F N +S I V D
Sbjct: 175 YYYFDTAKIIGVIDSGNLKSLGGSIADQIPIIAAIPITYAQKIFPDIN-ISQIYVMTYDQ 233
Query: 235 DAIEKTHENIVRILGN 250
+E+ VR++ +
Sbjct: 234 SQLEEASSQAVRLIES 249
>gi|317502229|ref|ZP_07960402.1| ABC transporter permease [Lachnospiraceae bacterium 8_1_57FAA]
gi|331088795|ref|ZP_08337705.1| hypothetical protein HMPREF1025_01288 [Lachnospiraceae bacterium
3_1_46FAA]
gi|316896344|gb|EFV18442.1| ABC transporter permease [Lachnospiraceae bacterium 8_1_57FAA]
gi|330407318|gb|EGG86821.1| hypothetical protein HMPREF1025_01288 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 853
Score = 39.4 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A+ +F ++K A + S I +++GV +I MS N F ++ + N
Sbjct: 411 MAFHNVFRDKKRAILVFMSLFMGITMILGVNGVISSMSAEN-FIKEYMDYNFEYNDIQFE 469
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLP 98
Q + QF + ++ I + V
Sbjct: 470 QPEQLNKEVPQFDEHFVEQIKQIDGVEN 497
>gi|120434567|ref|YP_860260.1| FtsX family membrane protein [Gramella forsetii KT0803]
gi|117576717|emb|CAL65186.1| FtsX family membrane protein (predicted permease) [Gramella
forsetii KT0803]
Length = 421
Score = 39.4 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 25/241 (10%), Positives = 66/241 (27%), Gaps = 13/241 (5%)
Query: 27 IASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANR 86
+ ++ GV+ G+ L+++++ G + + GI + + Y+ +
Sbjct: 19 FRTLLTAFGVLWGIFILVILLAAGKGLENGVKQGFGGIATNSMFMWTQPVSKPYKGLPKG 78
Query: 87 LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDR 146
F + V + +S G +N +F+ +
Sbjct: 79 RRFNYRIDDVEALRQTIPELRFISPRNQLGGFGGNNNVVRGLNTGAFNVYGDYPEIIQQE 138
Query: 147 GKGVIIGKDLARNLGISIGDKINILSPYGDVTPM-------------GMGIRSKSYTVLG 193
+ G+ L + I + G+
Sbjct: 139 PMDITSGRFLNHSDLQQKRKVAVIGDGVRNALYERNEEVIGSYIKISGVNFMVIGTYKKK 198
Query: 194 MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVV 253
+ +++ FN+ + V + + KD +I I ++ +
Sbjct: 199 GNGGGNSEEAQKEIFVPFTSFSQAFNMGDRVGWMAITAKDAYSITNLKSEIFELIKSRHT 258
Query: 254 V 254
+
Sbjct: 259 I 259
>gi|332177188|gb|AEE12878.1| protein of unknown function DUF214 [Porphyromonas asaccharolytica
DSM 20707]
Length = 419
Score = 39.4 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M +F R A+ L +NRK S + G+ G++ L+++MS+ GF M K+
Sbjct: 1 MRLFDRDIWGEAFHSLRTNRKR------SIATAFGIFWGILMLVILMSLSQGFSNGMRKQ 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLD 88
+ GI+ + + Y+
Sbjct: 55 LGGISSNTTMLYCSTTSKPYKGYPTDRW 82
>gi|147676748|ref|YP_001210963.1| ABC-type transport system, involved in lipoprotein release,
permeasecomponent [Pelotomaculum thermopropionicum SI]
gi|146272845|dbj|BAF58594.1| ABC-type transport system, involved in lipoprotein release,
permeasecomponent [Pelotomaculum thermopropionicum SI]
Length = 395
Score = 39.4 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 32/243 (13%), Positives = 65/243 (26%), Gaps = 19/243 (7%)
Query: 15 YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFRE-------DMIKRVLGINGH 67
F + A+ ++ +GV G + + SV G + ++ +++
Sbjct: 10 NAFRKKA------AAVLAVLGVAFGTALMTFLFSVAAGMEKRAERTFSELSGKIVVTGRD 63
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + + A + I + V V Q V S + + +
Sbjct: 64 AIFGGLFMGMGTPPVPAYYVQAIEGLPHVEK-VYAQVSVIMRPKNVSYAMPLFGYGGEEA 122
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ + +I+GK L L + V G +
Sbjct: 123 QASGKLPYGSLIEGSLPQNNREIIMGKSLQEYLNLLGAPFAVGGVYPFIVMEKGQAKDLE 182
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNL--ENAVSGIEVFVKDPDAIEKTHENIV 245
V + + + +E VS I V V +E I
Sbjct: 183 LKVVGVY---QTGNEVLDGAFSGSEELAREMGKIPAAYVSAINVVVDGVANVEGVARAIQ 239
Query: 246 RIL 248
+ L
Sbjct: 240 QEL 242
>gi|329964734|ref|ZP_08301788.1| efflux ABC transporter, permease protein [Bacteroides fluxus YIT
12057]
gi|328525134|gb|EGF52186.1| efflux ABC transporter, permease protein [Bacteroides fluxus YIT
12057]
Length = 419
Score = 39.4 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 27/225 (12%), Positives = 61/225 (27%), Gaps = 8/225 (3%)
Query: 20 RKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVD 79
++N + + + V G+ LIV++ NG + + + +
Sbjct: 13 KRNKLRTALTGFA---VAWGIFMLIVLLGAGNGIIHAFEQNSSERALNSIRIFPGWTTKS 69
Query: 80 YQ--FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFY 137
Y R+ ++ + +S ++ + + Y
Sbjct: 70 YDGLKEGRRIRLDNRDLEATDKQFTEHVISAGATVRQSNVNVSFGKEYVNISLMGVYPNY 129
Query: 138 GNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK---SYTVLGM 194
V G I DL + I K + +G +
Sbjct: 130 TEVETVKTAGGRFINYNDLKDRRKVIILHKKTAEILFDKTHTEPVGQFVNAGGVAYQVVG 189
Query: 195 FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
D + Y+ Q +N + ++ I K+ ++E
Sbjct: 190 IYNDQGDREANEAYIPFSTLQTIYNKGDKLNNIIFTTKNLSSMES 234
>gi|313885933|ref|ZP_07819672.1| efflux ABC transporter, permease protein [Porphyromonas
asaccharolytica PR426713P-I]
gi|312924622|gb|EFR35392.1| efflux ABC transporter, permease protein [Porphyromonas
asaccharolytica PR426713P-I]
Length = 419
Score = 39.4 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M +F R A+ L +NRK S + G+ G++ L+++MS+ GF M K+
Sbjct: 1 MRLFDRDIWGEAFHSLRTNRKR------SIATAFGIFWGILMLVILMSLSQGFSNGMRKQ 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLD 88
+ GI+ + + Y+
Sbjct: 55 LGGISSNTTMLYCSTTSKPYKGYPTDRW 82
>gi|71065140|ref|YP_263867.1| macrolide ABC transporter ATPase/inner membrane protein
[Psychrobacter arcticus 273-4]
gi|122064328|sp|Q4FU75|MACB_PSYA2 RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|71038125|gb|AAZ18433.1| ABC macrolide efflux transporter MacB, fused ATPase and inner
membrane domains [Psychrobacter arcticus 273-4]
Length = 665
Score = 39.4 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 11/89 (12%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++ + +++ + ++ +G++IG+ +++ V+ + G +E ++ + + +
Sbjct: 271 SFKMSLLAMRAHKMR------TLLTMLGIIIGIASVVSVVGLGKGSQEQILSNISSLGTN 324
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKV 96
+ YP D + N + P +
Sbjct: 325 TITITDGYPYGDPRRQYNDDNLTPQDAQA 353
>gi|32490851|ref|NP_871105.1| hypothetical protein WGLp102 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166057|dbj|BAC24248.1| ycfW [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 266
Score = 39.4 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 30/79 (37%), Gaps = 1/79 (1%)
Query: 191 VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI-LG 249
+ F D +SL AQ Y EN + GI + VK+ +EK + I +
Sbjct: 40 NVVDIISFFSQLDYQFAVVSLSSAQKYLYRENEIDGISINVKNIFNLEKIIKEIKKTNEK 99
Query: 250 NGVVVIDWQQRYQIFFSCY 268
+ + W +Y +
Sbjct: 100 EQIKIETWISKYGYMYKDI 118
>gi|254282696|ref|ZP_04957664.1| macrolide export ATP-binding/permease protein MacB 1 [gamma
proteobacterium NOR51-B]
gi|219678899|gb|EED35248.1| macrolide export ATP-binding/permease protein MacB 1 [gamma
proteobacterium NOR51-B]
Length = 399
Score = 39.0 bits (88), Expect = 0.62, Method: Composition-based stats.
Identities = 34/260 (13%), Positives = 80/260 (30%), Gaps = 13/260 (5%)
Query: 13 WRYLFSNRKNAFI--SIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
R +F ++ I + S ++ G+ +G+ A++++ S+ G ++ ++ + ++
Sbjct: 3 LRDIFKLTSSSLIAHRLRSLLTATGIAVGIAAVVLLTSIGEGLQQFVMAQFTQFGTTIIA 62
Query: 71 QQKYYPLVDYQFIANRLDFIPDV-IKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ P L + + V S + +
Sbjct: 63 VNPGKATTAGTSVGVFGTERPLTLEDALALGQLPEVEAVVPFVQGNAEVEAGSLHRRTTV 122
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT----PMGMGIR 185
+ G+ + + LA +G K+ G R
Sbjct: 123 YGAGPEMPKAFRISVSMGRFLPLDNPLAPRALAVLGSKMRSELFQDTNPLGQLITIAGSR 182
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ V+ + VY+ A FN E + I+V + +++ +I
Sbjct: 183 FRVVGVMESKGSVLGFDLDDTVYIPAARAMELFNTEGLI-EIDVMYAEGNSVTSVVNSIR 241
Query: 246 RIL-----GNGVVVIDWQQR 260
+L + V + QQ
Sbjct: 242 NLLRARHGRDEVTITTQQQM 261
>gi|237751522|ref|ZP_04582002.1| ABC transporter [Helicobacter bilis ATCC 43879]
gi|229372888|gb|EEO23279.1| ABC transporter [Helicobacter bilis ATCC 43879]
Length = 403
Score = 39.0 bits (88), Expect = 0.63, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+++A+R + N AF ++ +G++IGV ++IV++S+ NG + + ++ + +
Sbjct: 5 AILLAFRQISRNYLRAF------LTMLGIIIGVGSVIVMISLGNGTTKKVQMQIASMGSN 58
Query: 68 VVIQQKYY 75
+++ +
Sbjct: 59 LLVIHPAF 66
>gi|85059437|ref|YP_455139.1| putative ABC transporter ATP-binding component [Sodalis
glossinidius str. 'morsitans']
gi|122064336|sp|Q2NSZ1|MACB_SODGM RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|84779957|dbj|BAE74734.1| putative ABC transporter ATP-binding component [Sodalis
glossinidius str. 'morsitans']
Length = 653
Score = 39.0 bits (88), Expect = 0.63, Method: Composition-based stats.
Identities = 33/263 (12%), Positives = 77/263 (29%), Gaps = 15/263 (5%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A + + ++R + ++ G++ G+ A++ V+ + G RE ++R+ + +
Sbjct: 259 SLHMALKAMNAHRMR------TLLTMAGIVFGIAAVVTVVGLGEGAREQTLRRINFLGTN 312
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
V+ D A R D + + + L + +N D
Sbjct: 313 VISIYPGKDFFDENAGAIRTLVPADAVALARQGYVDSVSPELGTSARLRYRNKSANVDVI 372
Query: 128 YLQNSFSRFYG----NVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ S+ R G + + + SP G +
Sbjct: 373 GVGESYFRVRGLSLAEGRTFTSQQVAQATTDAIIDDNARRTLFAATGQSPLGQTLLLNTM 432
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ D +++ + V+GI V
Sbjct: 433 AVRVIGVAAADTNITGYHSDRIHIWLPYTTILHRLMGQQHVNGIVVSTGAGIDNAAAERT 492
Query: 244 IVRILGNGVVVIDWQQRYQIFFS 266
I +++ V D+ F+
Sbjct: 493 IEQLMLQRHGVKDFM-----LFN 510
>gi|222475292|ref|YP_002563708.1| phosphate ABC transporter (pstA) [Anaplasma marginale str. Florida]
gi|254995109|ref|ZP_05277299.1| phosphate ABC transporter (pstA) [Anaplasma marginale str.
Mississippi]
gi|255003275|ref|ZP_05278239.1| phosphate ABC transporter (pstA) [Anaplasma marginale str. Puerto
Rico]
gi|255004404|ref|ZP_05279205.1| phosphate ABC transporter (pstA) [Anaplasma marginale str.
Virginia]
gi|222419429|gb|ACM49452.1| phosphate ABC transporter (pstA) [Anaplasma marginale str. Florida]
Length = 487
Score = 39.0 bits (88), Expect = 0.63, Method: Composition-based stats.
Identities = 30/233 (12%), Positives = 72/233 (30%), Gaps = 6/233 (2%)
Query: 14 RYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL---GINGHVVI 70
R ++K+ +S+ S + +G+ +G++ L++ V NG++ ++L H+
Sbjct: 89 RVFIRSKKDRLLSVLSLGA-LGISVGMLVLVLCSIVNNGYKALTTTKILLSFDQIEHIDP 147
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
+ V Q I L+ I L + + S + + S
Sbjct: 148 GDSGFRDVCIQHIQGALEKIVQNSVDLSNPETRRIAHSIISETAHYNFAHLIEKGTSLSN 207
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
S + G + + + + + + + + + +
Sbjct: 208 ASVWFNASSDFVSSTPGSNEVYDAIMRKLVAENRIKRFFNSALFTNSHSKVPESAGITGA 267
Query: 191 VLGMFRMRFP--DYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
++G + MS Q S IEV + + ++
Sbjct: 268 LIGSLLTIIVCLALAIPVGVMSGICMQELLKRGKLASMIEVSINNLSSVPSII 320
>gi|302671577|ref|YP_003831537.1| ABC transporter permease [Butyrivibrio proteoclasticus B316]
gi|302396050|gb|ADL34955.1| ABC transporter permease protein [Butyrivibrio proteoclasticus
B316]
Length = 402
Score = 39.0 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 12/40 (30%), Positives = 26/40 (65%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ ++ +G++IG+ A+I V+S+ NG + ++ GI G+
Sbjct: 22 TAMTMLGIVIGIAAVIAVVSLGNGMSSFVQSQINGIAGNY 61
>gi|56416925|ref|YP_153999.1| phosphate ABC transporter [Anaplasma marginale str. St. Maries]
gi|56388157|gb|AAV86744.1| phosphate ABC transporter [Anaplasma marginale str. St. Maries]
Length = 461
Score = 39.0 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 30/233 (12%), Positives = 72/233 (30%), Gaps = 6/233 (2%)
Query: 14 RYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL---GINGHVVI 70
R ++K+ +S+ S + +G+ +G++ L++ V NG++ ++L H+
Sbjct: 63 RVFIRSKKDRLLSVLSLGA-LGISVGMLVLVLCSIVNNGYKALTTTKILLSFDQIEHIDP 121
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
+ V Q I L+ I L + + S + + S
Sbjct: 122 GDSGFRDVCIQHIQGALEKIVQNSVDLSNPETRRIAHSIISETAHYNFAHLIEKGTSLSN 181
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
S + G + + + + + + + + + +
Sbjct: 182 ASVWFNASSDFVSSTPGSNEVYDAIMRKLVAENRIKRFFNSALFTNSHSKVPESAGITGA 241
Query: 191 VLGMFRMRFP--DYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
++G + MS Q S IEV + + ++
Sbjct: 242 LIGSLLTIIVCLALAIPVGVMSGICMQELLKRGKLASMIEVSINNLSSVPSII 294
>gi|153877236|ref|ZP_02004145.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Beggiatoa sp. PS]
gi|152066300|gb|EDN65855.1| Lipoprotein releasing system, transmembrane protein, LolC/E family
[Beggiatoa sp. PS]
Length = 184
Score = 39.0 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 7/35 (20%), Positives = 13/35 (37%)
Query: 235 DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + L G DW R++ FF +
Sbjct: 2 FLAKPFNRELQAELPFGYHSYDWTYRHKNFFEAIK 36
>gi|94266787|ref|ZP_01290453.1| Protein of unknown function DUF214 [delta proteobacterium MLMS-1]
gi|93452556|gb|EAT03139.1| Protein of unknown function DUF214 [delta proteobacterium MLMS-1]
Length = 412
Score = 39.0 bits (88), Expect = 0.64, Method: Composition-based stats.
Identities = 34/249 (13%), Positives = 70/249 (28%), Gaps = 22/249 (8%)
Query: 36 VMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIK 95
+ IGV+ +++ ++V F+ MI + + K + + + L +
Sbjct: 26 IAIGVIFVLLFVAVTGSFKNLMIAQTTDSMLGHLQVHKRGYVASIENLPLNL---NLSGE 82
Query: 96 VLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRG-------- 147
L V + S L G S F N
Sbjct: 83 ALNRVEEMLDRRPEVANFSARLKFGAMFSTFVETTNIRLNGIDPERELATVPLLAGRLLE 142
Query: 148 -KGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGM 206
+ + L ++ G + + V G + +G
Sbjct: 143 GEPELTPGQLWVPELLARGMGVAMGDTVVVVATNQDGSVNGRQLTVGGILESATGPGGRD 202
Query: 207 VYMSLQEAQLYFNLEN-AVSGIEVFVKDPDAIEKTHENIVRILGNG--------VVVIDW 257
Y+ + +A LE +S I V + D D + + + L + W
Sbjct: 203 GYLHIDDAAAILRLEKREISEIAVRLDDFDRLPAVAAALEQELAPHTTPQGRPLYELHTW 262
Query: 258 QQRYQIFFS 266
++ F++
Sbjct: 263 ERL-SPFYN 270
>gi|329122108|ref|ZP_08250716.1| ABC superfamily ATP binding cassette transporter, membrane
protein [Dialister micraerophilus DSM 19965]
gi|327466915|gb|EGF12431.1| ABC superfamily ATP binding cassette transporter, membrane
protein [Dialister micraerophilus DSM 19965]
Length = 404
Score = 39.0 bits (88), Expect = 0.65, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AW + SN+ S ++ +G++IG+ A+IV++ + G ++ + ++ G+ +
Sbjct: 8 SLWMAWDAVKSNKLR------SLLTMLGIIIGITAVIVLLGLGFGIQDRIEGKISGLGSN 61
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVL 97
+V L+ + +
Sbjct: 62 IVAIHPGSRSKYGSERTGALESLSYKDYLA 91
>gi|238759458|ref|ZP_04620622.1| ABC transporter related [Yersinia aldovae ATCC 35236]
gi|238702355|gb|EEP94908.1| ABC transporter related [Yersinia aldovae ATCC 35236]
Length = 660
Score = 39.0 bits (88), Expect = 0.65, Method: Composition-based stats.
Identities = 20/238 (8%), Positives = 72/238 (30%), Gaps = 2/238 (0%)
Query: 26 SIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIAN 85
+ + ++ +G++IG+ +++ V+++ G ++ ++ + + + D +
Sbjct: 281 RLRTVLTMLGIIIGIASVVSVVALGKGSQQQVLANINAMGTSTLEIFPGKDFGDMRSATI 340
Query: 86 RLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFD 145
D + + +S+ + + + + + G
Sbjct: 341 HTLRSTDADALAQQGYIHSVTPAISTSTTLRYGNKSVSGSVNGVGEQYFLVRGYTLKQGM 400
Query: 146 RGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS--KSYTVLGMFRMRFPDYD 203
+ + + + + + + + V + F +
Sbjct: 401 AFTRTSVDGLMQEAVIDENTRDKLLPQGETPIGKVILLGSLPCRVIGVAAKKQSGFGSDE 460
Query: 204 NGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRY 261
N V++ A ++ + I V V D + + + ++L D+
Sbjct: 461 NLNVWIPYTTAMKRMLGQSYLKSITVRVNDDIDLANAEQGVTKLLTQRHGTQDFFVMN 518
>gi|54295759|ref|YP_128174.1| hypothetical protein lpl2849 [Legionella pneumophila str. Lens]
gi|53755591|emb|CAH17093.1| hypothetical protein lpl2849 [Legionella pneumophila str. Lens]
Length = 397
Score = 39.0 bits (88), Expect = 0.65, Method: Composition-based stats.
Identities = 21/232 (9%), Positives = 68/232 (29%), Gaps = 3/232 (1%)
Query: 23 AFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQF 82
+ S ++ +G+++G A++ ++S E +++ + ++ Y +
Sbjct: 15 TASKLRSLLAVLGILVGTAAVVALISCGQLATEKALEQFKALGTDLLAVSVYQKVPSKSH 74
Query: 83 IANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS---DFSYLQNSFSRFYGN 139
+ I ++ + ++ S+ + G + +
Sbjct: 75 SESDSLTIDQWQQIAERIPYVLRIAPYSTAYQTLSFNGKVMQGAVIGADESLADIIHVTL 134
Query: 140 VSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRF 199
F + + +I + P G +G + + F
Sbjct: 135 TQGHFVSFLDSFEHFCVIGDSLAQQIKEITLDDPIGKQLRIGQSLYTIIGVAERWKENGF 194
Query: 200 PDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNG 251
+ D + + + ++ + +K I++ I I+ +
Sbjct: 195 FNEDINQAVIIPLAGMSLVSKDAKINNAVLLLKPDSPIDEVINEIKEIINSQ 246
>gi|153938688|ref|YP_001390663.1| ABC transporter, permease protein [Clostridium botulinum F str.
Langeland]
gi|152934584|gb|ABS40082.1| ABC transporter, permease protein [Clostridium botulinum F str.
Langeland]
Length = 782
Score = 39.0 bits (88), Expect = 0.65, Method: Composition-based stats.
Identities = 26/250 (10%), Positives = 75/250 (30%), Gaps = 6/250 (2%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV-----LGIN 65
+A+ L+ N+K ++I S + I + + MSV + + + L +
Sbjct: 385 LAFANLWRNKKRTLLTIISVTLSGMLFIIISTIFSSMSVKSATEQQIKNDFEITPKLSSD 444
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+ + + FI ++ + + + + + + N
Sbjct: 445 LYCEKENLSKDSIKKLNFLKDASFISNIKYITGEIKEKDCQFDVYGYDEAYISKIRKNLL 504
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ + + + G L + + + + ++ + I
Sbjct: 505 QGKIDTNKLKNENLLILQKSDRYDYNRGLKLGDIVELMVYESVSTDKEGRKIYEGKKTIY 564
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ R + G ++ ++ + VS + + K E+ +++I
Sbjct: 565 KFKIAAIVSSRDLDMGWVMGPQFIIHKDNLTGIFKDVNVSAVAINSK-YGKEEELNKDIK 623
Query: 246 RILGNGVVVI 255
I+ V
Sbjct: 624 NIISKDTKVE 633
>gi|237747531|ref|ZP_04578011.1| macrolide export ATP-binding/permease macB [Oxalobacter formigenes
OXCC13]
gi|229378893|gb|EEO28984.1| macrolide export ATP-binding/permease macB [Oxalobacter formigenes
OXCC13]
Length = 646
Score = 39.0 bits (88), Expect = 0.66, Method: Composition-based stats.
Identities = 29/246 (11%), Positives = 82/246 (33%), Gaps = 12/246 (4%)
Query: 9 VIVAWRY----LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
A+R + +++ S ++ +G++IG+ +++ V+++ G +E +++ + +
Sbjct: 253 FFEAFRMSIQAIKTHKLR------SGLTMLGIIIGIASVVSVVALGKGSQEKILEDINSL 306
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ ++ D + + D + + + + G+
Sbjct: 307 GTNTIVVMPGKGFGDRNSSKYKTLTVNDAELLARQSYVDSTTPAVRTSGTLTRENISVTG 366
Query: 125 DFSYLQNSFSRFYG--NVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + + G + F + V G + + + T +
Sbjct: 367 QLNGVGDQYFDVTGLKPEAGRFFNKEDVKSGSAVVVIDQNTKEKLFPNTTDILGKTIIFN 426
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
K + F D ++ + +S I V VKD ++ +
Sbjct: 427 RQPLKIIGISQKQNASFGTTDTLTMWSPYTAVMNRITGDRNISSITVKVKDNVSMTAAEK 486
Query: 243 NIVRIL 248
N++R L
Sbjct: 487 NVIRFL 492
>gi|255100493|ref|ZP_05329470.1| ABC transporter, permease protein [Clostridium difficile QCD-63q42]
Length = 853
Score = 39.0 bits (88), Expect = 0.66, Method: Composition-based stats.
Identities = 22/251 (8%), Positives = 67/251 (26%), Gaps = 7/251 (2%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++++ + RYL N++ ++I I ++ G+ + S M+ + IK
Sbjct: 1 MNLYTSLTI----RYLKQNKRRTIVTIIGIILSTALICGIGN--IFESFMDYQMRETIKN 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + + + + + + + +
Sbjct: 55 DGSFHVTFYDVNRKNVEYVTKSAEIEKHAFTKQLGYSKLENSENAILSIKQYDKNAINGY 114
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + S + IG + +G +
Sbjct: 115 KVSIKEGRFPAKEGEIVLSESIINLIDDKLKIGDKITLKVGDMFDSSKKKIDSMTFHEGD 174
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ + + + ++ N + + + V V++P + K
Sbjct: 175 YIANEKDRTFKVVGIIEKPGFERYNGIATAIAYFNPMNNYNDTI-NVSVAVRNPKDVYKI 233
Query: 241 HENIVRILGNG 251
I + + +
Sbjct: 234 SNKISKNIYSN 244
>gi|160941612|ref|ZP_02088942.1| hypothetical protein CLOBOL_06511 [Clostridium bolteae ATCC
BAA-613]
gi|158435454|gb|EDP13221.1| hypothetical protein CLOBOL_06511 [Clostridium bolteae ATCC
BAA-613]
Length = 456
Score = 39.0 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ ++ + + + L ++ F ++ +GV+IG ++++++S+ G +E +
Sbjct: 1 MKTKDLLTICLQNLTRHKSRTF------LTVLGVIIGCCSVVIMISIGIGMKEAQKNMLA 54
Query: 63 GING 66
+
Sbjct: 55 QMGD 58
>gi|163942670|ref|YP_001647554.1| hypothetical protein BcerKBAB4_4776 [Bacillus weihenstephanensis
KBAB4]
gi|163864867|gb|ABY45926.1| protein of unknown function DUF214 [Bacillus weihenstephanensis
KBAB4]
Length = 857
Score = 39.0 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 30/224 (13%), Positives = 69/224 (30%), Gaps = 17/224 (7%)
Query: 27 IASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANR 86
+ + + +GVM+ M L+ SV +E ++ R + ++ +
Sbjct: 21 LIALGAALGVMLATMLLLGNQSVEQSVKEQVVSRY--GDYNLQFGYIKNDMYLNNESLKG 78
Query: 87 LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDR 146
+D + + K+ + F G +S + Y +
Sbjct: 79 IDGLENAEKISKALIPYPFPHYKELSGKPSYWGVEQDSPEMHSYKILEGRYPKEGAEVAL 138
Query: 147 GKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGM 206
KG +++ I + K+ V+G+
Sbjct: 139 TKGYTDRENIRVGDTIKLPFP---------------QHGEKAVKVVGILNPPLMASMGHS 183
Query: 207 VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN 250
Y + Q NL N + ++V V+D + + ++ + + N
Sbjct: 184 AYFPIHWLQKELNLPNQFNLVQVKVQDVNVKKAIAFDVHKKIEN 227
>gi|255009866|ref|ZP_05281992.1| putative ABC transporter ATP-binding protein [Bacteroides fragilis
3_1_12]
gi|313147652|ref|ZP_07809845.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313136419|gb|EFR53779.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 414
Score = 39.0 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 29/234 (12%), Positives = 60/234 (25%), Gaps = 8/234 (3%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFRE----DMIKRVLGINGHVVIQQKYYPLVDYQFIA 84
S ++ GV G+ LI +M G ++ + + +
Sbjct: 22 SLLTAFGVFWGIFMLIALMGGGQGMQDMMQAEFEGFATNSGFMGSQKTGEAYKGFRKGRY 81
Query: 85 NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDF 144
++ ++ GS + N +
Sbjct: 82 WDIENSDVEQIREKVKDIDVITPSIARWGSTAIFGEKKYDCSVKGLYPDYAKIENQDMAY 141
Query: 145 DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDN 204
R + ++ + I ++ +P D + + Y V+GM
Sbjct: 142 GRFINDVDVREGRKVCVIGKRVYESLFNPGEDPCGKYVRVDGIYYQVIGMCVSEGNINIQ 201
Query: 205 GM----VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVV 254
G V + Q +N+ + I VK + I IL +
Sbjct: 202 GRASEAVVLPFSTMQQAYNMGKRIDVICYTVKPGKKVSDLEPEIESILKEAHYI 255
>gi|254975021|ref|ZP_05271493.1| ABC transporter, permease protein [Clostridium difficile QCD-66c26]
gi|255092410|ref|ZP_05321888.1| ABC transporter, permease protein [Clostridium difficile CIP
107932]
gi|255314149|ref|ZP_05355732.1| ABC transporter, permease protein [Clostridium difficile QCD-76w55]
gi|255516827|ref|ZP_05384503.1| ABC transporter, permease protein [Clostridium difficile QCD-97b34]
gi|260683083|ref|YP_003214368.1| ABC transporter permease [Clostridium difficile CD196]
gi|260686681|ref|YP_003217814.1| ABC transporter permease [Clostridium difficile R20291]
gi|260209246|emb|CBA62546.1| ABC transporter, permease protein [Clostridium difficile CD196]
gi|260212697|emb|CBE03780.1| ABC transporter, permease protein [Clostridium difficile R20291]
Length = 853
Score = 39.0 bits (88), Expect = 0.68, Method: Composition-based stats.
Identities = 22/251 (8%), Positives = 67/251 (26%), Gaps = 7/251 (2%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++++ + RYL N++ ++I I ++ G+ + S M+ + IK
Sbjct: 1 MNLYTSLTI----RYLKQNKRRTIVTIIGIILSTALICGIGN--IFESFMDYQMRETIKN 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + + + + + + + +
Sbjct: 55 DGSFHVTFYDVNRKNVEYVTKSAEIEKHAFTKQLGYSKLENSENAILSIKQYDQNAINGY 114
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + S + IG + +G +
Sbjct: 115 KVSIKEGRFPAKEGEIVLSESIINLIDDKLKIGDKITLKVGDMFDSSKKKIDSMTFHEGD 174
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ + + + ++ N + + + V V++P + K
Sbjct: 175 YIANEKDRTFKVVGIIKKPGFERYNGIATAIAYFNPMNNYNDTI-NVSVAVRNPKDVYKI 233
Query: 241 HENIVRILGNG 251
I + + +
Sbjct: 234 SNKISKNIYSN 244
>gi|116074800|ref|ZP_01472061.1| possible ABC transporter [Synechococcus sp. RS9916]
gi|116068022|gb|EAU73775.1| possible ABC transporter [Synechococcus sp. RS9916]
Length = 409
Score = 39.0 bits (88), Expect = 0.68, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 33/72 (45%), Gaps = 10/72 (13%)
Query: 3 IFSRFEVI----VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMI 58
+ S+ + +A L +NR S ++ +G++IG ++I ++ V G +
Sbjct: 1 MASKLPLTETVGMALNTLRANRLR------SLLTMLGIVIGNASVITLVGVGRGAQNLAE 54
Query: 59 KRVLGINGHVVI 70
++ + +V+
Sbjct: 55 DQLSNLGANVLF 66
>gi|226947842|ref|YP_002802933.1| putative ABC transporter, permease protein [Clostridium botulinum
A2 str. Kyoto]
gi|226843660|gb|ACO86326.1| putative ABC transporter, permease protein [Clostridium botulinum
A2 str. Kyoto]
Length = 822
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 32/260 (12%), Positives = 74/260 (28%), Gaps = 21/260 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M +F VA+ + N+ + + I +M+ I+ S + + + K
Sbjct: 1 MRLF----FKVAFNSIRKNKIRYMLLTCTLILSTIIMLSTS--IIKDSAIKIREDQLRKT 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
L + + P + + I N + I + ++P + G A + + + V
Sbjct: 55 TLNSQLVITTADEKDPFFNPKDIINSIKDIDGISHIVPRIGGMAKDAKTLKDINIIGVNL 114
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
++ + N+ + L I +
Sbjct: 115 NKQKAAFPIELIDKYKAKDKENEIIINERYAKENSLKVGAKIKLLIGTKNKEFIISGISK 174
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
D +S+ AQ + ++ I + +K+ D I
Sbjct: 175 ---------------NTGVFDPSMNTAMISIDNAQYLLDQKDNAYSIGITIKNLDHINNM 219
Query: 241 HENIVRILGNGVVVIDWQQR 260
E I + + ++
Sbjct: 220 IEKIKPKVSSKFIIQQRYDM 239
>gi|162455510|ref|YP_001617877.1| hypothetical protein sce7228 [Sorangium cellulosum 'So ce 56']
gi|161166092|emb|CAN97397.1| hypothetical protein sce7228 [Sorangium cellulosum 'So ce 56']
Length = 406
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A R + ++ + ++ +G++IGV A+++V+++ G R ++ + G+ +
Sbjct: 10 IALRAIVRSKLR------AALTVLGILIGVSAVVIVVALGTGVRNRVLGEISGMGASSIY 63
Query: 71 QQKY 74
Sbjct: 64 IFPQ 67
>gi|222094547|ref|YP_002528607.1| ABC transporter , permease [Bacillus cereus Q1]
gi|221238605|gb|ACM11315.1| ABC transporter, permease [Bacillus cereus Q1]
Length = 383
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 6/86 (6%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A +F+++ S ++ +G++IGV A+I ++S+ +G K + + V
Sbjct: 1 MALSSIFAHKMR------SILTMLGIIIGVSAIITIISMGDGTNAKFKKELGQGKDNEVT 54
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKV 96
P D + + V
Sbjct: 55 IYYNNPDYGTDNAKITADMLNRLQTV 80
>gi|94263560|ref|ZP_01287371.1| Protein of unknown function DUF214 [delta proteobacterium MLMS-1]
gi|93456093|gb|EAT06240.1| Protein of unknown function DUF214 [delta proteobacterium MLMS-1]
Length = 401
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 31/258 (12%), Positives = 69/258 (26%), Gaps = 16/258 (6%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A L+ R GVM+ A+I +++ + + +R I
Sbjct: 15 ALSSLWRRRGKN----------TGVMLVFTAVIFLLASFHLVTSALSERAEEILAPGPDI 64
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
Q + +
Sbjct: 65 VIQKMSAGRQEAIPLAYQEELRGFFGIRQTVPRIWGYYFDEVRLANYTVVGIEPERM--- 121
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTV 191
++ G + + + +SP + + K++ V
Sbjct: 122 PLAQHLGRSLAAGEFPGLAGQAAGPPPAAVGGLIAQTLNVSPGSYFSLFRPDLSLKTFEV 181
Query: 192 LGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHENIVRILGN 250
G+F ++ M L++A+ F + V+ + V+V +P I+ I + L +
Sbjct: 182 SGVFAEATDLLSADLIAMELEQARDLFQIPAGLVTDLCVYVHNPAEIDNLARRISKALPD 241
Query: 251 GVVVIDWQQRYQIFFSCY 268
V+ Q + +
Sbjct: 242 T-RVLTRGQMERT-YQAV 257
>gi|93005392|ref|YP_579829.1| ABC transporter related [Psychrobacter cryohalolentis K5]
gi|122064329|sp|Q1QDA8|MACB_PSYCK RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|92393070|gb|ABE74345.1| ABC transporter related [Psychrobacter cryohalolentis K5]
Length = 665
Score = 39.0 bits (88), Expect = 0.69, Method: Composition-based stats.
Identities = 11/89 (12%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++ + +++ + ++ +G++IG+ +++ V+ + G +E ++ + + +
Sbjct: 271 SFKMSLLAMRAHKMR------TLLTMLGIIIGIASVVSVVGLGKGSQEQILSNISSLGTN 324
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKV 96
+ YP D + N + P +
Sbjct: 325 TITVTDGYPYGDPRRQYNDDNLTPQDAQA 353
>gi|291297333|ref|YP_003508731.1| hypothetical protein Mrub_2967 [Meiothermus ruber DSM 1279]
gi|290472292|gb|ADD29711.1| protein of unknown function DUF214 [Meiothermus ruber DSM 1279]
Length = 381
Score = 39.0 bits (88), Expect = 0.70, Method: Composition-based stats.
Identities = 7/49 (14%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDM 57
+ + +R L + S ++ +G+++ ++++ +S G R+ +
Sbjct: 6 LALIYRNLRARPVR------SILTLLGIVVSTASMVLFLSFGEGLRKAL 48
>gi|124008599|ref|ZP_01693290.1| ABC-type transport systems, involved in lipoprotein release,
permease components [Microscilla marina ATCC 23134]
gi|123985843|gb|EAY25707.1| ABC-type transport systems, involved in lipoprotein release,
permease components [Microscilla marina ATCC 23134]
Length = 442
Score = 39.0 bits (88), Expect = 0.70, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+VAW + +N+ + ++ +G++ GV A+I ++++ NG ++++++++
Sbjct: 1 MVAWDAILANKLR------ATLTALGIIFGVSAVIAMLAIGNGAQQEILEQI 46
>gi|297565501|ref|YP_003684473.1| hypothetical protein Mesil_1060 [Meiothermus silvanus DSM 9946]
gi|296849950|gb|ADH62965.1| protein of unknown function DUF214 [Meiothermus silvanus DSM
9946]
Length = 410
Score = 39.0 bits (88), Expect = 0.71, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 6/42 (14%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNG 52
+AWR + +N S ++ +GV+IGV A+I + + G
Sbjct: 9 IAWRAILANPLR------SVLTALGVIIGVAAVIALTGIGQG 44
>gi|296133688|ref|YP_003640935.1| protein of unknown function DUF214 [Thermincola sp. JR]
gi|296032266|gb|ADG83034.1| protein of unknown function DUF214 [Thermincola potens JR]
Length = 385
Score = 39.0 bits (88), Expect = 0.72, Method: Composition-based stats.
Identities = 31/251 (12%), Positives = 75/251 (29%), Gaps = 16/251 (6%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + + +A L + G++IG+ ++ + ++ +++ +
Sbjct: 1 MKLHN-----IAINNLRRRKAKMA------FLVAGMVIGIATIVTLYTITTAMEQEIADK 49
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
I ++ + + L + D V + + + V +
Sbjct: 50 FDQIGSNMTVVPQSDSLSMSYEGVSASDVGGSVNLMTMNDVAKIRTIKNKENIATVAPKL 109
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + + + + + K + + L
Sbjct: 110 LDSLEVEKKKRLVMGIQFPAELRLKKWWKINGSKPENEKDILLGSEAARALGKKPGDQLE 169
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV-FVKDPDAIEK 239
G R K VL + ++ +++M L Q ++AVS +EV + IE+
Sbjct: 170 IGGSRYKIAGVLEP----TGNQEDSVIFMDLSTLQALTGKKDAVSFVEVAALCYTCPIEE 225
Query: 240 THENIVRILGN 250
I L N
Sbjct: 226 ITRQISEKLPN 236
>gi|271970054|ref|YP_003344250.1| hypothetical protein Sros_8874 [Streptosporangium roseum DSM
43021]
gi|270513229|gb|ACZ91507.1| protein of unknown function DUF214 [Streptosporangium roseum DSM
43021]
Length = 418
Score = 39.0 bits (88), Expect = 0.72, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 4 FSRFE-VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
S FE + A R L +N+ +F ++ +G++IGV A+I++++ G + + + +
Sbjct: 1 MSWFEILRFALRGLAANKLRSF------LTTLGILIGVGAVILLVAFGEGASQSIQQNIQ 54
Query: 63 GINGHVV 69
+ + +
Sbjct: 55 RLGSNTL 61
>gi|154149608|ref|YP_001403226.1| hypothetical protein Mboo_0059 [Candidatus Methanoregula boonei
6A8]
gi|153998160|gb|ABS54583.1| protein of unknown function DUF214 [Methanoregula boonei 6A8]
Length = 397
Score = 39.0 bits (88), Expect = 0.72, Method: Composition-based stats.
Identities = 26/250 (10%), Positives = 71/250 (28%), Gaps = 11/250 (4%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVM--NGFREDMIKRV 61
S ++ R + + S ++ +G++IGV+A I M ++ + +
Sbjct: 1 MSTIFWEISKRNIRIHMLR------SSLAMLGIIIGVVA-IASMGILGNSIVQAVSSSLS 53
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ +V+ + L + + + S + +
Sbjct: 54 SVGDSVIVMPYAGGSGFGGGASSANLMLTEQEYQQIKRAVAPNIAIPVHSTSEYMTMGVG 113
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
S+ + + ++ D G + + + V G
Sbjct: 114 SDDIVATIYGLPPDQTKDLLPDLTAGDYSNGNSGCLVGATFATDHNVKV-GSRISVGNDG 172
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ ++ M F + + ++ + +N + + + V V + D +
Sbjct: 173 QYGTLRVTGIIKERGMSFDISTDNSIVVTQDWFESTYNDQYQYNEVVVKVANGDTAD-VK 231
Query: 242 ENIVRILGNG 251
I L
Sbjct: 232 TTIENQLNRN 241
>gi|149275737|ref|ZP_01881882.1| putative FtsX-related transmembrane transport protein [Pedobacter
sp. BAL39]
gi|149233165|gb|EDM38539.1| putative FtsX-related transmembrane transport protein [Pedobacter
sp. BAL39]
Length = 787
Score = 39.0 bits (88), Expect = 0.72, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 42/108 (38%), Gaps = 14/108 (12%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVM-------SVMNGFRE 55
+F + + +A R L+ N+ FI+ G+ IG+ + ++++ S F++
Sbjct: 1 MF-KLNLKIALRSLWKNKSYTFIN------VGGLAIGLASCMILLLYVAYEWSFDRQFKD 53
Query: 56 DMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQ 103
V+ N V Q + + A + IP + V Q
Sbjct: 54 AEKTYVIYNNTSVGGQTFSWAWTPGRMAAEIREKIPGIAHVSHSSYPQ 101
>gi|323190701|gb|EFZ75970.1| macrolide export ATP-binding/permease protein macB [Escherichia
coli RN587/1]
Length = 648
Score = 39.0 bits (88), Expect = 0.73, Method: Composition-based stats.
Identities = 30/270 (11%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ F ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMRTF------LTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|260200014|ref|ZP_05767505.1| putative adhesion component transport transmembrane protein ABC
transporter [Mycobacterium tuberculosis T46]
gi|289442407|ref|ZP_06432151.1| adhesion component transport transmembrane protein ABC transporter
[Mycobacterium tuberculosis T46]
gi|289415326|gb|EFD12566.1| adhesion component transport transmembrane protein ABC transporter
[Mycobacterium tuberculosis T46]
Length = 855
Score = 39.0 bits (88), Expect = 0.73, Method: Composition-based stats.
Identities = 32/238 (13%), Positives = 70/238 (29%), Gaps = 14/238 (5%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
AWR L + +G+ +GV +IV + V + +
Sbjct: 13 WRTAWRRLRQRP------FQYILLVLGIALGVA-MIVAIDVSSNSAQRAFDLSAAAITGK 65
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ P + G GL + +
Sbjct: 66 STHRLVSGPAGVDQQLYVDLRRHGYDFSAPVIEGYVLARGLGNRAMQFMGTDPFAESAFR 125
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
++ + R GV++ + +A+ G+++GD+I + G
Sbjct: 126 SPLWSNQNIAELGGFLTRPNGVVLSRQVAQKYGLAVGDRIALQ-------VKGAPTTVTL 178
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+L + ++ AQ ++ +S I++ +KD D + H+ +
Sbjct: 179 VGLLTPADEVSNQKLSDLIIADTSTAQELSHMPGRLSHIDLIIKDEDTATRIHQRLTA 236
>gi|215486010|ref|YP_002328441.1| macrolide transporter ATP-binding /permease protein [Escherichia
coli O127:H6 str. E2348/69]
gi|312969052|ref|ZP_07783259.1| macrolide export ATP-binding/permease protein macB [Escherichia
coli 2362-75]
gi|215264082|emb|CAS08424.1| fused macrolide transporter subunits of ABC superfamily:
ATP-binding component/membrane component [Escherichia
coli O127:H6 str. E2348/69]
gi|312286454|gb|EFR14367.1| macrolide export ATP-binding/permease protein macB [Escherichia
coli 2362-75]
Length = 648
Score = 39.0 bits (88), Expect = 0.73, Method: Composition-based stats.
Identities = 30/270 (11%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ F ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMRTF------LTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|160887998|ref|ZP_02069001.1| hypothetical protein BACUNI_00402 [Bacteroides uniformis ATCC 8492]
gi|270295629|ref|ZP_06201830.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|317478612|ref|ZP_07937769.1| hypothetical protein HMPREF1007_00885 [Bacteroides sp. 4_1_36]
gi|156862497|gb|EDO55928.1| hypothetical protein BACUNI_00402 [Bacteroides uniformis ATCC 8492]
gi|270274876|gb|EFA20737.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|290770239|gb|ADD61995.1| putative protein [uncultured organism]
gi|316905253|gb|EFV27050.1| hypothetical protein HMPREF1007_00885 [Bacteroides sp. 4_1_36]
Length = 419
Score = 39.0 bits (88), Expect = 0.73, Method: Composition-based stats.
Identities = 28/225 (12%), Positives = 62/225 (27%), Gaps = 8/225 (3%)
Query: 20 RKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVD 79
++N + + + V G+ LIV++ NG + + + +
Sbjct: 13 KRNKLRTFLTGFA---VAWGIFMLIVLLGAGNGIIHAFEQNASERALNSIRIFPGWTTKS 69
Query: 80 YQ--FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFY 137
Y R+ + + +S ++ + + Y
Sbjct: 70 YDGLKEGRRVQLDNRDMDDTEKQFTENVISAGATVRQSNVNVSFGQEYINISLLGVYPNY 129
Query: 138 GNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY---TVLGM 194
V I DL + I K + +G +G + +
Sbjct: 130 TEVETVKTADGRFINYNDLKDRRKVIILHKKSADILFGKTHTEPIGQFVNASGVAYQVVG 189
Query: 195 FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
D + Y+ Q +N + ++ I K+ +IE
Sbjct: 190 LYNDQGDREANEAYIPFSTLQTIYNKGDKLNNIIFTTKNLHSIES 234
>gi|2967528|gb|AAC05799.1| Orf217 [Buchnera aphidicola]
Length = 217
Score = 39.0 bits (88), Expect = 0.74, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 60/150 (40%), Gaps = 1/150 (0%)
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + + Y +II DLA+ + GD IN++ ++
Sbjct: 19 FKNIKYIKKYFSFQKKLYNFSKLKKIYNNEIIISSDLAKYFSLKEGDCINLIILNKKISF 78
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
I+S S+ V +F ++ + + Q +FN++N ++ IE+++ DP +K
Sbjct: 79 DKTQIQSFSFKVKSIFHSNGIS-NSNIGLIPFIFFQKFFNIKNNINKIELYMSDPFQADK 137
Query: 240 THENIVRILGNGVVVIDWQQRYQIFFSCYE 269
I + + + +W Y+ + +
Sbjct: 138 IILKIAKKIKTPLFFYNWMYSYKYIYHDIK 167
>gi|308049252|ref|YP_003912818.1| hypothetical protein Fbal_1540 [Ferrimonas balearica DSM 9799]
gi|307631442|gb|ADN75744.1| protein of unknown function DUF214 [Ferrimonas balearica DSM 9799]
Length = 408
Score = 39.0 bits (88), Expect = 0.74, Method: Composition-based stats.
Identities = 32/254 (12%), Positives = 71/254 (27%), Gaps = 9/254 (3%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +AWR L+ ++ ++ A+ + + ++ S+ G + I +
Sbjct: 3 LKLAWRNLWRQKRRTLLTAAALALAL------ILSLLTRSLQEGSYANNIDNAARFATGL 56
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ Q + + + L S + +
Sbjct: 57 IQIQHPDFGDSHSIDDLVPGNREFIEAARADKPINYVLPRLESFALAAGEQRSKGAMVMA 116
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKD--LARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ S Y V G+ + L + +
Sbjct: 117 VLPSREAEYAKVDERVVAGQYLTDDDQGVLVGEGLARFLELEVGDKLVLYGQGYRGQTAA 176
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
Y + G+ R P DN +VY+ L Q ++ + +S + D A+ + + +
Sbjct: 177 GLYPIRGLLRFPMPGIDNQLVYLPLTLGQQLYSTGDQISAWVLHTPDLAALPRLQRTLAQ 236
Query: 247 ILGNGVVVIDWQQR 260
V DW
Sbjct: 237 QYPEQ-RVRDWADL 249
>gi|210617598|ref|ZP_03291654.1| hypothetical protein CLONEX_03878 [Clostridium nexile DSM 1787]
gi|210149263|gb|EEA80272.1| hypothetical protein CLONEX_03878 [Clostridium nexile DSM 1787]
Length = 458
Score = 39.0 bits (88), Expect = 0.74, Method: Composition-based stats.
Identities = 10/45 (22%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 15 YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
L + F ++ +GV+IG +++V++S+ G ++ K
Sbjct: 5 NLKRRKLRTF------LTVLGVVIGTASIVVMISLGLGLQQSTYK 43
>gi|86140728|ref|ZP_01059287.1| ABC transporter, permease protein, putative [Leeuwenhoekiella
blandensis MED217]
gi|85832670|gb|EAQ51119.1| ABC transporter, permease protein, putative [Leeuwenhoekiella
blandensis MED217]
Length = 419
Score = 39.0 bits (88), Expect = 0.74, Method: Composition-based stats.
Identities = 32/240 (13%), Positives = 70/240 (29%), Gaps = 12/240 (5%)
Query: 27 IASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANR 86
+ ++ GV+ G+ L+V+++ G + K GI + + Y+ +
Sbjct: 19 FRTALTAFGVLWGIFILVVLLAAGKGLENGVKKDFGGIATNTMFMWTQGISKPYKGLPKG 78
Query: 87 LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDR 146
F D+ V + +S G +N +F+ + +
Sbjct: 79 RRFNYDLDDVAAIKQNIPELRFVSPRNQLGGFGGANNVVRGLNSGAFNVYGDYPEFIEQQ 138
Query: 147 GKGVIIGKDLARNL------------GISIGDKINILSPYGDVTPMGMGIRSKSYTVLGM 194
+ G+ + G+ N G + T +
Sbjct: 139 PMNITSGRFMNYGDIQEKRKVAIIGEGVRNALYENGEEAIGTYIKINGVNFMLVGTYAKV 198
Query: 195 FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVV 254
+ + +Y+ FN+ N V + V KD +I + I+ +
Sbjct: 199 ASEGDSEENQKEIYVPFTAFSQAFNMGNRVGWMAVTAKDGYSITALKSEVFDIIKTRHTI 258
>gi|315924246|ref|ZP_07920471.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Pseudoramibacter alactolyticus ATCC 23263]
gi|315622459|gb|EFV02415.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Pseudoramibacter alactolyticus ATCC 23263]
Length = 413
Score = 39.0 bits (88), Expect = 0.75, Method: Composition-based stats.
Identities = 29/259 (11%), Positives = 67/259 (25%), Gaps = 21/259 (8%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A L +N+ S ++ +G++IG+ ++I + S+ + + + + I G +
Sbjct: 9 LAINSLKNNKLR------SILTMLGIIIGIASVIAIASIGSAISRSLSQSLQDIAGKSID 62
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
+ D I + + +G
Sbjct: 63 VSVEARNSEAAIEPRSADLITQDMLKAFKTKFAGRIQDAGVYTAGGSGHLDDLRQSKVTL 122
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
+ + Y + D+ +++ L +G P+G + T
Sbjct: 123 SGANAGYLHFRGVKLISGRFFSNDDIDNTRSVALISHSQALKTFGHADPVGRHVTVSGDT 182
Query: 191 VLGMF---------------RMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD 235
F VY+ A + V V+
Sbjct: 183 ATSDFRIIGVYKNAKSDQNPFSSNMSNTADTVYIPTTMAANLTGTTANYGEMIVTVRSDA 242
Query: 236 AIEKTHENIVRILGNGVVV 254
E ++I +
Sbjct: 243 NTESLSKDIRQWFNTRYYA 261
>gi|88607119|ref|YP_504976.1| phosphate ABC transporter, permease protein PtsA [Anaplasma
phagocytophilum HZ]
gi|19880590|gb|AAM00409.1|AF392616_4 phosphate ABC transporter [Anaplasma phagocytophilum]
gi|88598182|gb|ABD43652.1| phosphate ABC transporter, permease protein PtsA [Anaplasma
phagocytophilum HZ]
Length = 448
Score = 39.0 bits (88), Expect = 0.75, Method: Composition-based stats.
Identities = 24/233 (10%), Positives = 63/233 (27%), Gaps = 6/233 (2%)
Query: 14 RYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQK 73
R F ++++ F S+ S +S +G+ +G++ L++ V NG++ ++L +K
Sbjct: 50 RVFFRSKQDRFFSLLS-LSALGISVGMLMLVLCSIVNNGYKALTATKILLHLDDTESIRK 108
Query: 74 YYPLVDYQ--FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
+ V ++ + +
Sbjct: 109 DSEYFREDCIKRIHSALDKILSSHVDLNNPETKRIAYSIVSETAHYELADLIQKNVRISP 168
Query: 132 ---SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ +S + ++ K I L +
Sbjct: 169 DGLWLNASTEFLSGVKNNEISSVVLKTFEDQERIKRSFFNKSLFTNSHSKVPENAGILGA 228
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ + + M+ Q + S IE+ + + ++
Sbjct: 229 LIGSLLTIIVCLAIAIPLGIMTGICMQELLSNNKVSSIIEISINNLSSVPSII 281
>gi|309791836|ref|ZP_07686323.1| hypothetical protein OSCT_2274 [Oscillochloris trichoides DG6]
gi|308226158|gb|EFO79899.1| hypothetical protein OSCT_2274 [Oscillochloris trichoides DG6]
Length = 421
Score = 39.0 bits (88), Expect = 0.76, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
VAW+ + +++ +F ++ +G++IGV A++ ++++ +G++ + + I
Sbjct: 6 AFRVAWQAMLTHKLRSF------LTMLGIIIGVGAVVGMLAIGDGYQLFIEREFNKIG 57
>gi|296533366|ref|ZP_06895965.1| glycolipid ABC exporter family [Roseomonas cervicalis ATCC 49957]
gi|296266292|gb|EFH12318.1| glycolipid ABC exporter family [Roseomonas cervicalis ATCC 49957]
Length = 391
Score = 39.0 bits (88), Expect = 0.76, Method: Composition-based stats.
Identities = 27/252 (10%), Positives = 68/252 (26%), Gaps = 12/252 (4%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+ +AWR L + + +A+ I+ GVM V++ + GFR + +
Sbjct: 9 LPLRLAWRQLRAEKAR----LATAIA------GVMFACVLVFMQLGFRAALFDSATSLIA 58
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
+ + + + L V + +
Sbjct: 59 AMRGEVFLIHPMTLASFRPEPLPRVRASQALALPEVAQSVPIYMAQSTWRNPENGERRTI 118
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ + + +A + + + I +
Sbjct: 119 QLVGFDIEAGAMRFEGLERVAEALKRPDTVAFDRRSRPEFGPVEALLAARPGTLPVQIGN 178
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF--NLENAVSGIEVFVKDPDAIEKTHENI 244
+ V+G+ + +G V MS + + + + ++ T + +
Sbjct: 179 RQVDVVGLVEIGASFGADGNVIMSETNFRRLMPERPFSNADLVAIRLRPGADPAATRDRL 238
Query: 245 VRILGNGVVVID 256
+L V V+
Sbjct: 239 SALLPPDVAVVT 250
>gi|218264388|ref|ZP_03478245.1| hypothetical protein PRABACTJOHN_03941 [Parabacteroides johnsonii
DSM 18315]
gi|218222026|gb|EEC94676.1| hypothetical protein PRABACTJOHN_03941 [Parabacteroides johnsonii
DSM 18315]
Length = 421
Score = 39.0 bits (88), Expect = 0.76, Method: Composition-based stats.
Identities = 32/251 (12%), Positives = 72/251 (28%), Gaps = 8/251 (3%)
Query: 13 WRYLFSN-RKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
+R ++S +KN + + S V G+ LIV++ NG + ++ + + V
Sbjct: 7 FREIWSTIQKNKLRTFLTGFS---VAWGIFMLIVLLGAGNGLKNGVMSNFRNFSLNRVET 63
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
Y Y+ + ++ V +++ S + +Y N
Sbjct: 64 WPRYTSKPYKGMQMNRRIEYKDEDLIAIPRENPEVDLITASISRSDTLSYGDEYNAYSLN 123
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGD---KINILSPYGDVTPMGMGIRSKS 188
+ N D+ + ++ + G+
Sbjct: 124 GVHPSKAVIDNIEMTVGNGRFINDIDVKEKRKVIVLSPRMKEVLFKGEDPLGKYVNAGSV 183
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ + +N Y+ AQ +N + I VK E+ + +
Sbjct: 184 AYQVIGVYKAENNDNNAPAYIPFSTAQTLYNAGYGLDEIIFTVKGISTQEEF-DAFDKRF 242
Query: 249 GNGVVVIDWQQ 259
+ W
Sbjct: 243 REQMGARHWFD 253
>gi|197124668|ref|YP_002136619.1| hypothetical protein AnaeK_4287 [Anaeromyxobacter sp. K]
gi|196174517|gb|ACG75490.1| protein of unknown function DUF214 [Anaeromyxobacter sp. K]
Length = 420
Score = 39.0 bits (88), Expect = 0.76, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 34/79 (43%), Gaps = 6/79 (7%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A L R +F ++ +G++IGVM +I +++++ G ++ + + +
Sbjct: 21 IALESLVGARLRSF------LTTLGIVIGVMTVIAIVAIIQGLNHSFEGQIANLGANTLY 74
Query: 71 QQKYYPLVDYQFIANRLDF 89
K+ L + +
Sbjct: 75 VSKFAWLAQGRGEWWEMRN 93
>gi|153856020|ref|ZP_01996933.1| hypothetical protein DORLON_02959 [Dorea longicatena DSM 13814]
gi|149751741|gb|EDM61672.1| hypothetical protein DORLON_02959 [Dorea longicatena DSM 13814]
Length = 467
Score = 39.0 bits (88), Expect = 0.77, Method: Composition-based stats.
Identities = 10/44 (22%), Positives = 24/44 (54%), Gaps = 6/44 (13%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
L + F ++ +GV+IG +++V++S+ G ++ + K
Sbjct: 6 LRRRKLRTF------LTVLGVLIGTASIVVMISLGLGMQQSLYK 43
>gi|312882908|ref|ZP_07742640.1| hypothetical protein VIBC2010_20055 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309369427|gb|EFP96947.1| hypothetical protein VIBC2010_20055 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 404
Score = 39.0 bits (88), Expect = 0.77, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
R + AW+ L +++ + S ++ + ++ G++++IV+M++ GF + +
Sbjct: 1 MRAALFQAWKTLLAHK------VKSILAVVAIVWGLVSIIVLMALGEGFYQHYSASFSLL 54
Query: 65 NGHVVIQQKYYPLVDYQ 81
N Q +Q
Sbjct: 55 NSDSQYVQPSQASKPWQ 71
>gi|153934175|ref|YP_001382976.1| putative ABC transporter, permease protein [Clostridium botulinum A
str. ATCC 19397]
gi|153935638|ref|YP_001386522.1| putative ABC transporter, permease protein [Clostridium botulinum A
str. Hall]
gi|152930219|gb|ABS35719.1| putative ABC transporter, permease protein [Clostridium botulinum A
str. ATCC 19397]
gi|152931552|gb|ABS37051.1| putative ABC transporter, permease protein [Clostridium botulinum A
str. Hall]
Length = 822
Score = 39.0 bits (88), Expect = 0.77, Method: Composition-based stats.
Identities = 32/260 (12%), Positives = 73/260 (28%), Gaps = 21/260 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M +F VA+ + N+ + + I +M+ I+ S + + + K
Sbjct: 1 MRLF----FKVAFNSIRKNKIRYMLLTCTLILSTIIMLSTS--IIKDSAIKIREDQLRKT 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
L + + P + + I N + I + ++P + G A + + V
Sbjct: 55 TLNSQLVITTADEENPFFNPKGIINSIKDIDGISHIVPRIGGMAKDVKTLKDVNIIGVDL 114
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
++ + N+ + L I +
Sbjct: 115 NKQKAAFPIELIDKYKVKDKENEIIINERYAKENSLKVGAKIKLLIGTKNKEFIISGISK 174
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
D +S+ AQ + ++ I + +K+ D I
Sbjct: 175 ---------------NTGVFDPSMNTAMISIDNAQYLLDQKDNAYSIGITIKNLDHINNM 219
Query: 241 HENIVRILGNGVVVIDWQQR 260
E I + + ++
Sbjct: 220 IEKIKPKVSSKFIIQQRYDM 239
>gi|122064326|sp|Q3B5J7|MACB_PELLD RecName: Full=Macrolide export ATP-binding/permease protein MacB
Length = 664
Score = 39.0 bits (88), Expect = 0.78, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
A++ +F+N+ S +S +G+++GV ++I +M++ G + + + + + +++
Sbjct: 271 AFQSIFANKVR------SLLSVLGILVGVASVIAMMALGEGAKVSIEEELKSMGSNLI 322
>gi|319404820|emb|CBI78421.1| ATP-binding protein of ABC transporter [Bartonella rochalimae ATCC
BAA-1498]
Length = 660
Score = 39.0 bits (88), Expect = 0.79, Method: Composition-based stats.
Identities = 26/243 (10%), Positives = 74/243 (30%), Gaps = 8/243 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++A + ++R F ++ +G++IG+ +++ ++++ NG ++ +++ + +
Sbjct: 269 AFVMALLAMNAHRMRTF------LTMLGMIIGISSVVAMIALGNGTQKKILENLKSFGTN 322
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D Q D + S +S + +
Sbjct: 323 TLTIMPGKSFSDPQSGKITSLVEADAEALSELPYVAGVTSQISVSSMVYYNAIETKAIVV 382
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ F G + + + + + + +
Sbjct: 383 GVGEQFFEIQGLKVIQGRLFDQSSVRDRAVDLIIEKEALSVLFPHSQENPIGKIIRVGNV 442
Query: 188 SYTVLGMFRMRFPD--YDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++G+ + D +Y+ Q+ F V I + + D I
Sbjct: 443 PARIIGVVDSQNNSGVSDTIQIYLPYTAVQMRFLGRTDVRAIILKIADNVDSHLAETMIR 502
Query: 246 RIL 248
R+L
Sbjct: 503 RLL 505
>gi|317470659|ref|ZP_07930044.1| hypothetical protein HMPREF1011_00391 [Anaerostipes sp. 3_2_56FAA]
gi|316901794|gb|EFV23723.1| hypothetical protein HMPREF1011_00391 [Anaerostipes sp. 3_2_56FAA]
Length = 560
Score = 39.0 bits (88), Expect = 0.79, Method: Composition-based stats.
Identities = 43/243 (17%), Positives = 81/243 (33%), Gaps = 21/243 (8%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
F R LF +K F ++ G+ G MAL++V GF L +
Sbjct: 181 NFTWKSTLRNLFRYKKRFF------MTIFGIG-GCMALLLV-----GF-------GLKDS 221
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+ + +Y ++ Y D + + Q + SS + +
Sbjct: 222 IFAISKNQYQNIMTYDASVTLEDDLSAKKEQEIASWIQKQHTIPSSTKIRSVSVDVEFDG 281
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
S + F + + R K I G+ + I + + +
Sbjct: 282 DSKSASLFVPEDAKELSSYIRFKDRISGEKYRLSDNGIILTEKVCSLLGIKIGDTVIIKE 341
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ TV +Y + +YMS Q + E + ++ +KD D EKT ++
Sbjct: 342 GETKTVRAKVEHITENYMHHNIYMSKDLYQKLYGEEPEYN--QILLKDKDRSEKTETDLG 399
Query: 246 RIL 248
+ L
Sbjct: 400 KGL 402
>gi|255520662|ref|ZP_05387899.1| ABC transporter, ATP-binding protein [Listeria monocytogenes FSL
J1-175]
Length = 140
Score = 39.0 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ + +A + L S + F ++ +G++IGV ++I+++S+ +++ +
Sbjct: 5 MTLLQ--SIKLALKQLLSTKFRTF------LTMLGIIIGVFSVILLVSIGEAISKNVSTQ 56
Query: 61 VLGINGHVVIQQKYYPLVDYQF 82
+ + +++ Y + +F
Sbjct: 57 LGDMGSNLLTVNFYSDNPNDKF 78
>gi|86160572|ref|YP_467357.1| ABC transporter, inner membrane subunit [Anaeromyxobacter
dehalogenans 2CP-C]
gi|85777083|gb|ABC83920.1| ABC transporter, inner membrane subunit [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 420
Score = 39.0 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 34/79 (43%), Gaps = 6/79 (7%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A L R +F ++ +G++IGVM +I +++++ G ++ + + +
Sbjct: 21 IALESLVGARLRSF------LTTLGIVIGVMTVIAIVAIIQGLNRSFEGQIANLGANTLY 74
Query: 71 QQKYYPLVDYQFIANRLDF 89
K+ L + +
Sbjct: 75 VSKFAWLAQGRGEWWEMRN 93
>gi|70729518|ref|YP_259256.1| macrolide efflux ABC transporter ATP-binding/permease [Pseudomonas
fluorescens Pf-5]
gi|122064297|sp|Q4KES7|MACB1_PSEF5 RecName: Full=Macrolide export ATP-binding/permease protein MacB 1
gi|68343817|gb|AAY91423.1| macrolide efflux ABC transporter, ATP-binding/permease protein
[Pseudomonas fluorescens Pf-5]
Length = 652
Score = 39.0 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 33/266 (12%), Positives = 94/266 (35%), Gaps = 12/266 (4%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
++AW L S+R + ++ +G++IG+ +++ ++++ G + ++K + I +
Sbjct: 261 AFVMAWVALVSHRMR------TLLTMLGIVIGITSVVSIVAIGEGAKRYVLKDIQAIGSN 314
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + A + +P + L + + + + I +
Sbjct: 315 TIDIFPGASFGDSRAAAIQ-TLMPADVTALNQLYYVDSATPMVGRSLLLRYGNIDLNATV 373
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+ ++ + A+ + I + + P D + + +
Sbjct: 374 NGVSHLYFQVRDIKLASGISFSENDARRQAQVVVIDHNTRNRLFGPDVDPLGQVILVGNL 433
Query: 188 SYTVLGMFRMRFPDYDNG---MVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
TV+G+ R + V++ + A + + I V +KD + E++
Sbjct: 434 PCTVIGVTRENKNMFAASNLLNVWLPYETAAGRVLGQRHLDSISVRIKDGQPSKVVEEHV 493
Query: 245 VRILGNGVVVIDWQQRYQIFFSCYES 270
+++ D+ S ++
Sbjct: 494 KKLMEQRHGTKDFFTNN--LDSIMQT 517
>gi|294675914|ref|YP_003576529.1| macrolide export ABC transporter ATP-binding/permease MacB
[Rhodobacter capsulatus SB 1003]
gi|294474734|gb|ADE84122.1| macrolide export ABC transporter, ATP-binding/permease protein MacB
[Rhodobacter capsulatus SB 1003]
Length = 648
Score = 38.6 bits (87), Expect = 0.82, Method: Composition-based stats.
Identities = 28/243 (11%), Positives = 76/243 (31%), Gaps = 7/243 (2%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A + L ++R +F ++ +G++IG+ +++ V+++ G +E ++ + + + +
Sbjct: 261 MAVKALAAHRLRSF------LTMLGIIIGIASVVSVVALGKGSQEKVLSGISALGTNTIT 314
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
+ D R + D + + + +S+ S L ++ +
Sbjct: 315 IRPGTGFGDRMASRIRTLVVADAVALAAQPFTASVSPEISTQKSATLGAITTSVSLRGVS 374
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD-VTPMGMGIRSKSY 189
+ G + +I + + K + +G
Sbjct: 375 AGYFDVGGFTLREGMLIDQAMIDARAQVAVLDAEAYKAFFPQGGSVLGKTILIGKVPLRI 434
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
V+ A + N ++ I V V D + I ++
Sbjct: 435 IGRVEATSSGFGPTQVRVFTPFTTASVRITGSNTINSIAVKVADTVTMADAEGQISALIE 494
Query: 250 NGV 252
Sbjct: 495 QRH 497
>gi|262037212|ref|ZP_06010697.1| macrolide export ATP-binding/permease protein MacB [Leptotrichia
goodfellowii F0264]
gi|261748766|gb|EEY36120.1| macrolide export ATP-binding/permease protein MacB [Leptotrichia
goodfellowii F0264]
Length = 405
Score = 38.6 bits (87), Expect = 0.82, Method: Composition-based stats.
Identities = 33/260 (12%), Positives = 91/260 (35%), Gaps = 18/260 (6%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDM--- 57
M F ++ V+ LFS + +F ++ +G++IG+ A++++ S+ G +E++
Sbjct: 1 MDFFESLKLSVS--NLFSYKVRSF------LTMLGIIIGISAVVMMSSLGAGVKENIVGD 52
Query: 58 -----IKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSG 112
+ Q + L I V V P A ++ +
Sbjct: 53 LNKLGVGNFQVFIDTSPGQTYKSEDLFTTKDIANLKAIEGVEAVSPSSDAYARINIGENQ 112
Query: 113 GSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKI--NI 170
+ V+ G++ F + + + +++ + II + ++ + + +
Sbjct: 113 SAMVVGSGVTQDTFKITNYTIVKGRKFLPDEYRKDGRYIIIDSTSADMLFPGQNPVGQKL 172
Query: 171 LSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVF 230
+ + + + PD ++ + + N +N + +++
Sbjct: 173 ALNFRKNMQIVTIVGVYKNPFANLGGGGGPDLPVFALFPNEYLNHINGNAQNKFTSLDMK 232
Query: 231 VKDPDAIEKTHENIVRILGN 250
+ +E E + L +
Sbjct: 233 AGNAKELEIVMERVREFLKS 252
>gi|220931105|ref|YP_002508013.1| ABC-type antimicrobial peptide transport system, permease component
[Halothermothrix orenii H 168]
gi|219992415|gb|ACL69018.1| ABC-type antimicrobial peptide transport system, permease component
[Halothermothrix orenii H 168]
Length = 417
Score = 38.6 bits (87), Expect = 0.82, Method: Composition-based stats.
Identities = 27/231 (11%), Positives = 68/231 (29%), Gaps = 11/231 (4%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ + +A + SN+ +F+++ +G++IGV A+I+++S+ +G ++ + +
Sbjct: 1 MNLMETIRLALAG--VGSNKLRSFLTL------LGIIIGVTAVILMVSLGSGTQKVVSGQ 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + + + L + L + + V L +G
Sbjct: 53 FSNLQTRQIYIDENHNLPYHLQGRLSLRDRDYLKDSVMGVEKVVPFYQLYTGVKYGDNEQ 112
Query: 121 ISNSD---FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
+ + D + L + N++ P
Sbjct: 113 EGWVYGIDPASQELINVNISYGRFFDQSDIDNKERVAIVGEQLLERLARTGNMVQPQHAS 172
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIE 228
TP K + G + M + +
Sbjct: 173 TPDYASAVGKYIYLSGKKFIIVGVMQESQNMMFISNQSVLLPYTTIRDHWR 223
>gi|226226547|ref|YP_002760653.1| hypothetical membrane protein [Gemmatimonas aurantiaca T-27]
gi|226089738|dbj|BAH38183.1| hypothetical membrane protein [Gemmatimonas aurantiaca T-27]
Length = 413
Score = 38.6 bits (87), Expect = 0.83, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 6/49 (12%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+A+ L + + S + +GVMIGVM LI V+S++ G + +
Sbjct: 9 LAFNQLRVQK------LKSAFTLLGVMIGVMFLIAVVSIVEGMGRYVEE 51
>gi|187780062|ref|ZP_02996535.1| hypothetical protein CLOSPO_03658 [Clostridium sporogenes ATCC
15579]
gi|187773687|gb|EDU37489.1| hypothetical protein CLOSPO_03658 [Clostridium sporogenes ATCC
15579]
Length = 783
Score = 38.6 bits (87), Expect = 0.83, Method: Composition-based stats.
Identities = 26/250 (10%), Positives = 75/250 (30%), Gaps = 6/250 (2%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV-----LGIN 65
+A+ L+ N+K ++I S + I + + MSV + + + L +
Sbjct: 386 LAFANLWRNKKRTLLTIISVTLSGMLFIIISTIFSSMSVKSATEQQIKNDFEITPKLSSD 445
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+ + + FI ++ + + + + + + N
Sbjct: 446 LYCEKENLSKDSIKKLNFLKDASFISNIKYITGEIKEKNCQFDVYGYDEAYISKIKKNLL 505
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ + + + G L + + + + ++ + I
Sbjct: 506 QGKIDANKLKNENLLILQKSDRYDYNRGLKLGDIVELIVYESVSTDKEGKKIYEGKKTIY 565
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ R + G ++ ++ + VS + + K E+ +++I
Sbjct: 566 KFKIAAIVSSRDLDMGWVMGPQFIIHKDNLTGIFKDVNVSAVAINSK-YGKEEELNKDIK 624
Query: 246 RILGNGVVVI 255
I+ V
Sbjct: 625 NIISKDTKVE 634
>gi|330830444|ref|YP_004393396.1| ABC transporter permease [Aeromonas veronii B565]
gi|328805580|gb|AEB50779.1| ABC transporter permease protein [Aeromonas veronii B565]
Length = 399
Score = 38.6 bits (87), Expect = 0.83, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 23/53 (43%), Gaps = 6/53 (11%)
Query: 13 WRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
WR L + R S +S +G+ IG+ ++ ++ + G R ++
Sbjct: 11 WRALLAGRSR------SLLSALGIAIGIASVTLLTGIGEGLRLYLLDSFSQFG 57
>gi|322419561|ref|YP_004198784.1| hypothetical protein GM18_2045 [Geobacter sp. M18]
gi|320125948|gb|ADW13508.1| protein of unknown function DUF214 [Geobacter sp. M18]
Length = 409
Score = 38.6 bits (87), Expect = 0.86, Method: Composition-based stats.
Identities = 42/257 (16%), Positives = 82/257 (31%), Gaps = 17/257 (6%)
Query: 8 EVIVAWRYLFSNRKNAFISIA-------SFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+++A R L N+ A +++ + I+ + + G +I G ++
Sbjct: 7 SLLIALRALRVNKMRALLTMLGIIIGIAAVIAMVAIGAGASKMISDQISSIGSNLLLVLP 66
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+G + + Y P V V P V G V + S V+
Sbjct: 67 GSVTSGGMRSGSGGTQTLTYDDARAIKAECPSVAAVAPNVRGSGQVVYGNQNWSTVVYGV 126
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ S+ K +IG+ +A NL P G + +
Sbjct: 127 TPEMVDVRDWTIVAGRNITQSDVDGATKNCLIGQTVADNLFGG-------TDPIGKIIRI 179
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF---NLENAVSGIEVFVKDPDAI 237
+ + + + ++Y+ L+ AQ N V I V KD + +
Sbjct: 180 KKIPFTVVGLLGRKGQSPQGQDQDDVIYVPLRTAQRKLLGSQFPNVVGSIMVQAKDAEVL 239
Query: 238 EKTHENIVRILGNGVVV 254
+K E + +L +
Sbjct: 240 DKAEEEVKELLNQRHRI 256
>gi|166364401|ref|YP_001656674.1| ABC transporter [Microcystis aeruginosa NIES-843]
gi|166086774|dbj|BAG01482.1| possible ABC-transporter [Microcystis aeruginosa NIES-843]
Length = 404
Score = 38.6 bits (87), Expect = 0.86, Method: Composition-based stats.
Identities = 45/280 (16%), Positives = 95/280 (33%), Gaps = 25/280 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + + +A+ L N+ S ++ +G+ IG ++I ++ V G ++ +++
Sbjct: 1 MEMLEN--LKMAFSALMGNKLR------SGLTMLGIAIGNASVIALVGVGEGAQKVALEQ 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ +V+ V R D + V A +S SG +
Sbjct: 53 FEALGPNVLFVSTSSRNVRRTIPNPRPLTYEDAQAIASQVPAIAAISPELSGKRILSFGN 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+++ Y NV N I+ DL R+ + + + +G+ P+
Sbjct: 113 RTSNSPL---IGVGAEYLNVRNRQLSKGRFIMESDLKRDNRVIVLGSELAKNLFGNRNPV 169
Query: 181 GMGIRSKSYTVLGMFR-----MRFPDYDNGMVYMSLQEAQLYFNLENAV-----SGIEVF 230
G +R + + + F + + L N++ + I V
Sbjct: 170 GENLRIGNLSFQVIGVLQAKGSLFEANQDDRALIPLTTMSNQVLGRNSIYGIPLTHISVL 229
Query: 231 VKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYES 270
K+ I+ I +L V D + Y F ++
Sbjct: 230 AKNSAQIKAAQFQISNLLQMRHQVSD--ENYVQVF--LQT 265
>gi|295107530|emb|CBL05073.1| ABC-type antimicrobial peptide transport system, permease
component [Gordonibacter pamelaeae 7-10-1-b]
Length = 395
Score = 38.6 bits (87), Expect = 0.87, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
W L +N+ S ++ +G++IG+ A+I + S++ G + ++ +
Sbjct: 7 FYETWHALSANKGR------SLLTILGIVIGIAAVIAMTSLIAGIQNTLMGEM 53
>gi|315497092|ref|YP_004085896.1| hypothetical protein Astex_0041 [Asticcacaulis excentricus CB 48]
gi|315415104|gb|ADU11745.1| protein of unknown function DUF214 [Asticcacaulis excentricus CB
48]
Length = 652
Score = 38.6 bits (87), Expect = 0.87, Method: Composition-based stats.
Identities = 34/262 (12%), Positives = 84/262 (32%), Gaps = 19/262 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A + S+R F ++ +G++IG+ +++ V+++ G R+ ++ + I +
Sbjct: 261 AFTMAILAMKSHRLRTF------LTMLGIIIGIASVVCVVALGEGSRQKVLANISAIGTN 314
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + R + D + + +SS + + + +
Sbjct: 315 TLEIMPGSGFGDLRSGRVRTLVVGDAEALAKESYVDSVTPTVSSSVTARAGATAATATVN 374
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGK--DLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ + + R G + + + S+ G+V +G
Sbjct: 375 GVGDHYFRVKGLSLAQGRLFDAGDVSRLDQVIVIDQNSLKTFFPNGQAVGEVLLLGDVPA 434
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ D+ +YM + + V VKD + + +
Sbjct: 435 RIIGITAKSGSSFGGNTDSLNIYMPYTAVNARMLGTQTLRSVTVRVKDTADSKAAEDAVT 494
Query: 246 RILGNGVVVIDWQQRYQI--FF 265
+L Q+R+ FF
Sbjct: 495 TLL---------QERHGTKDFF 507
>gi|225175445|ref|ZP_03729440.1| protein of unknown function DUF214 [Dethiobacter alkaliphilus AHT
1]
gi|225169197|gb|EEG77996.1| protein of unknown function DUF214 [Dethiobacter alkaliphilus AHT
1]
Length = 833
Score = 38.6 bits (87), Expect = 0.87, Method: Composition-based stats.
Identities = 29/236 (12%), Positives = 61/236 (25%), Gaps = 9/236 (3%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+ R++ N + IS +MI ++ ++++ G +
Sbjct: 3 IILRFVLRNIAEKKLRTLLIIS--AIMISTALFFASTAISGTIERMFLEQMQTRVGESDL 60
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
F L + S
Sbjct: 61 VVMAGENQASPFFRETLLHDYQDRMNYTIGTIDTGGLYRVSHDQQDPWSLRGIEMDDLQT 120
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
+ FY + +G+ +IIG+ A+ G+ GD I I G + +
Sbjct: 121 MTPVSFYQEANLHPFQGRKIIIGRATAKEYGLQAGDSIEIAIS-------GTARQFRIAA 173
Query: 191 VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
V N + + F+ V + + + + + I + I
Sbjct: 174 VAHDTGPFKDVGQNPFAVVPKETLSSLFDARGRVHTLYLSLDNSEQIHEVMSEIEA 229
>gi|78186384|ref|YP_374427.1| ATPase [Chlorobium luteolum DSM 273]
gi|78166286|gb|ABB23384.1| ATPase [Chlorobium luteolum DSM 273]
Length = 670
Score = 38.6 bits (87), Expect = 0.87, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
A++ +F+N+ S +S +G+++GV ++I +M++ G + + + + + +++
Sbjct: 277 AFQSIFANKVR------SLLSVLGILVGVASVIAMMALGEGAKVSIEEELKSMGSNLI 328
>gi|15801042|ref|NP_287058.1| hypothetical protein Z1554 [Escherichia coli O157:H7 EDL933]
gi|15830548|ref|NP_309321.1| hypothetical protein ECs1294 [Escherichia coli O157:H7 str. Sakai]
gi|168760757|ref|ZP_02785764.1| efflux ABC transporter, permease protein [Escherichia coli O157:H7
str. EC4501]
gi|168788794|ref|ZP_02813801.1| efflux ABC transporter, permease protein [Escherichia coli O157:H7
str. EC869]
gi|168799181|ref|ZP_02824188.1| efflux ABC transporter, permease protein [Escherichia coli O157:H7
str. EC508]
gi|217328505|ref|ZP_03444587.1| efflux ABC transporter, permease protein [Escherichia coli O157:H7
str. TW14588]
gi|261227099|ref|ZP_05941380.1| hypothetical protein EscherichiacoliO157_21256 [Escherichia coli
O157:H7 str. FRIK2000]
gi|261255785|ref|ZP_05948318.1| hypothetical protein EscherichiacoliO157EcO_08128 [Escherichia coli
O157:H7 str. FRIK966]
gi|291282047|ref|YP_003498865.1| hypothetical protein G2583_1285 [Escherichia coli O55:H7 str.
CB9615]
gi|12514425|gb|AAG55669.1|AE005305_6 hypothetical protein Z1554 [Escherichia coli O157:H7 str. EDL933]
gi|13360754|dbj|BAB34717.1| hypothetical membrane protein [Escherichia coli O157:H7 str. Sakai]
gi|189368788|gb|EDU87204.1| efflux ABC transporter, permease protein [Escherichia coli O157:H7
str. EC4501]
gi|189371478|gb|EDU89894.1| efflux ABC transporter, permease protein [Escherichia coli O157:H7
str. EC869]
gi|189378258|gb|EDU96674.1| efflux ABC transporter, permease protein [Escherichia coli O157:H7
str. EC508]
gi|217318932|gb|EEC27358.1| efflux ABC transporter, permease protein [Escherichia coli O157:H7
str. TW14588]
gi|290761920|gb|ADD55881.1| hypothetical protein G2583_1285 [Escherichia coli O55:H7 str.
CB9615]
gi|320637480|gb|EFX07280.1| hypothetical protein ECO5101_10247 [Escherichia coli O157:H7 str.
G5101]
gi|320643041|gb|EFX12242.1| hypothetical protein ECO9389_03726 [Escherichia coli O157:H- str.
493-89]
gi|320648498|gb|EFX17153.1| hypothetical protein ECO2687_19836 [Escherichia coli O157:H- str. H
2687]
gi|320653814|gb|EFX21888.1| hypothetical protein ECO7815_16173 [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320659658|gb|EFX27221.1| hypothetical protein ECO5905_10849 [Escherichia coli O55:H7 str.
USDA 5905]
gi|320664427|gb|EFX31578.1| hypothetical protein ECOSU61_02343 [Escherichia coli O157:H7 str.
LSU-61]
gi|326338500|gb|EGD62327.1| hypothetical protein ECF_05003 [Escherichia coli O157:H7 str. 1125]
gi|326345599|gb|EGD69339.1| ABC-type transport system involved in lipoprotein release permease
component [Escherichia coli O157:H7 str. 1044]
Length = 436
Score = 38.6 bits (87), Expect = 0.87, Method: Composition-based stats.
Identities = 42/275 (15%), Positives = 88/275 (32%), Gaps = 22/275 (8%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSV---------MNGF 53
+F +V A+ LF +++ +F S + I GV I + + S N
Sbjct: 24 LFYSRDVKFAFLNLFRHKRRSF-STITAIVLGGVAIFLYGGFIDYSFWILKEQTIRTNIG 82
Query: 54 REDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGG 113
+ + + + I + D+ + + +S S
Sbjct: 83 HVQIYNQHYFETSNKNKSLIADYAALKKAILSDPTLAADISTLSGQLEFTGVISHYESET 142
Query: 114 SGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSP 173
S + SF + +G + +G LA+ L D ++++
Sbjct: 143 SSYFSALGVEPLPALKLGSFDKIIAGSDLSRVKGDEITLGSGLAKTLNAKYDDWLDVMVV 202
Query: 174 YGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKD 233
+ ++ + F DYD+ + + L AQ + VS + + +K+
Sbjct: 203 NTAGGQGALSLKMRGI-----FESGIKDYDDVAMKIPLDTAQRMMGT-DGVSKVLILLKE 256
Query: 234 PDAIEKTHENIVRILGNG---VVVIDWQQRYQIFF 265
D + + + +VV DW+ F
Sbjct: 257 -DDTAAFSAKLRQFIERNHLPLVVKDWRDV--SLF 288
>gi|83858418|ref|ZP_00951940.1| hypothetical protein OA2633_02926 [Oceanicaulis alexandrii
HTCC2633]
gi|83853241|gb|EAP91093.1| hypothetical protein OA2633_02926 [Oceanicaulis alexandrii
HTCC2633]
Length = 416
Score = 38.6 bits (87), Expect = 0.87, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ + + VA L N +F ++ +GV+ GVMA+I +S+ +G + + +
Sbjct: 1 MNMMA--AIGVALTALRVNALRSF------LAILGVIFGVMAVITTVSLADGASQAVQDQ 52
Query: 61 VLGINGHVVI 70
+ + + +
Sbjct: 53 ISSLGSNSLN 62
>gi|307592194|ref|YP_003899785.1| DevC protein [Cyanothece sp. PCC 7822]
gi|306985839|gb|ADN17719.1| DevC protein [Cyanothece sp. PCC 7822]
Length = 384
Score = 38.6 bits (87), Expect = 0.89, Method: Composition-based stats.
Identities = 35/259 (13%), Positives = 85/259 (32%), Gaps = 15/259 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F F++ +AWR L + + V+ G+ ++M + GF+ +
Sbjct: 1 MF--FDIPLAWRQLIREKSR----------MMVVLTGITFADILMFMQLGFQSALYDSAA 48
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
I+ V R + + L F Q+ +
Sbjct: 49 RIHHSVNADLVMISSRSKSLSYMRAFPRRRLYQALSFDGVQSVTPIYVGYRDWKNPKTSD 108
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + +V + + I + S + +I++ + +
Sbjct: 109 FRTIFIYGFEPVKPFADVPGLAENIDKIRIKDKI-LFDQASRLEYGDIVNQFQTNQIVTT 167
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF--NLENAVSGIEVFVKDPDAIEKT 240
+ +K V+G+F + +G + S F ++ + +K I++
Sbjct: 168 ELGNKKIDVVGLFTLGPTFSADGNIITSDSTFLHLFPDRQAEQINIGLIQIKPNADIKQV 227
Query: 241 HENIVRILGNGVVVIDWQQ 259
EN+ + L N +++ + Q+
Sbjct: 228 AENLKQQLPNDIIIYNKQE 246
>gi|149275736|ref|ZP_01881881.1| putative FtsX-related transmembrane transport protein [Pedobacter
sp. BAL39]
gi|149233164|gb|EDM38538.1| putative FtsX-related transmembrane transport protein [Pedobacter
sp. BAL39]
Length = 796
Score = 38.6 bits (87), Expect = 0.89, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 24/49 (48%), Gaps = 7/49 (14%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMN 51
+F R + +A R L+ N+ + IS +G+ +G+ ++ M N
Sbjct: 1 MF-RLNLKIALRNLWKNKG------YALISIVGLAVGLTVFMLAMRFGN 42
>gi|320192445|gb|EFW67087.1| hypothetical protein ECoD_00702 [Escherichia coli O157:H7 str.
EC1212]
Length = 436
Score = 38.6 bits (87), Expect = 0.90, Method: Composition-based stats.
Identities = 42/275 (15%), Positives = 88/275 (32%), Gaps = 22/275 (8%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSV---------MNGF 53
+F +V A+ LF +++ +F S + I GV I + + S N
Sbjct: 24 LFYSRDVKFAFLNLFRHKRRSF-STITAIVLGGVAIFLYGGFIDYSFWILKEQTIRTNIG 82
Query: 54 REDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGG 113
+ + + + I + D+ + + +S S
Sbjct: 83 HVQIYNQHYFETSNKNKSLIADYAALKKAILSDPTLAADISTLSGQLEFTGVISHYESET 142
Query: 114 SGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSP 173
S + SF + +G + +G LA+ L D ++++
Sbjct: 143 SSYFSALGVEPLPALKLGSFDKIIAGSDLSRVKGDEITLGSGLAKTLNAKYDDWLDVMVV 202
Query: 174 YGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKD 233
+ ++ + F DYD+ + + L AQ + VS + + +K+
Sbjct: 203 NTAGGQGALSLKMRGI-----FESGIKDYDDVAMKIPLDTAQRMMGT-DGVSKVLILLKE 256
Query: 234 PDAIEKTHENIVRILGNG---VVVIDWQQRYQIFF 265
D + + + +VV DW+ F
Sbjct: 257 -DDTAAFSAKLRQFIERNHLPLVVKDWRDV--SLF 288
>gi|291563100|emb|CBL41916.1| ABC-type transport system, involved in lipoprotein release,
permease component [butyrate-producing bacterium SS3/4]
Length = 436
Score = 38.6 bits (87), Expect = 0.91, Method: Composition-based stats.
Identities = 28/253 (11%), Positives = 74/253 (29%), Gaps = 19/253 (7%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M F +I++ L + + ++ +GV+IG +++V++S+ G +E+ ++
Sbjct: 1 MRFFDL--LIMSINNLRRRKLR------TGLTVLGVVIGTASIVVMVSLGIGLKENTVES 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
IQ + V K+ ++ L + +
Sbjct: 53 YASFGSLTRIQISSGYGNQSEDDY---LVDATVTKLAKIPHVKSVSPILETDVNLKQGVY 109
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
S+ + + + + + + + +
Sbjct: 110 QGYSNIVGMPREELEQIPLAEGELPNKNAATLEFIVGNMVSDNFYNSKTGKGSWDGEDLS 169
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVS--GIEVFVKDPDAIE 238
+ + K + + F+ +N L EN S G +++ I+
Sbjct: 170 KVDLIHKPFFTM--FQNMGNGDENSQKKYLFPACALVDGGENGFSEYGYQIYTD----ID 223
Query: 239 KTHENIVRILGNG 251
+ +I
Sbjct: 224 LLKTQLKKIYRKN 236
>gi|268325349|emb|CBH38937.1| conserved hypothetical membrane protein, FtsX family [uncultured
archaeon]
gi|268325958|emb|CBH39546.1| conserved hypothetical membrane protein, FtsX family [uncultured
archaeon]
Length = 410
Score = 38.6 bits (87), Expect = 0.91, Method: Composition-based stats.
Identities = 30/266 (11%), Positives = 86/266 (32%), Gaps = 28/266 (10%)
Query: 2 SIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
++ RF +A+R + + S ++ +G+ +G+ A+I +M+V G + +
Sbjct: 15 TMLDRF--FLAYRNISERKTR------SLMTLLGIAVGIAAIIALMAVGYGMEHAISGEL 66
Query: 62 LGINGHVVIQQKYYPL--------VDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGG 113
+ + + + + + +V V + G A +
Sbjct: 67 TKMADVIHVVPGKIVPGRGLVELGSFTEADIRDVGRVRNVESVAAMIIGGAGIEYRDERI 126
Query: 114 SGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSP 173
+ + + + + + K ++G ++A +
Sbjct: 127 PVEICG-CNPQELDAIYGETFKLMAGRTLRARDKKVCLLGYNIANEYFEKEINP------ 179
Query: 174 YGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKD 233
+K V + + N VY+ +A+ ++ ++ + V + D
Sbjct: 180 ----HSHMTIEGTKYRVVGILEKHAMFAEANNRVYVPQNDAKDILESDD-IAFMAVRILD 234
Query: 234 PDAIEKTHENIVRILGNGVVVIDWQQ 259
E+ + I ++ + + + Q
Sbjct: 235 VSKTEEVSDEIEEVIDDNHNLEGFTQ 260
>gi|291297337|ref|YP_003508735.1| hypothetical protein Mrub_2971 [Meiothermus ruber DSM 1279]
gi|290472296|gb|ADD29715.1| protein of unknown function DUF214 [Meiothermus ruber DSM 1279]
Length = 412
Score = 38.6 bits (87), Expect = 0.92, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 6/44 (13%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNG 52
+AWR + N S ++ +GV+IGV A++ + V G
Sbjct: 7 FRIAWRAILGNPLR------SVLTTLGVIIGVAAVVALTMVGQG 44
>gi|309778271|ref|ZP_07673200.1| efflux ABC transporter, permease protein [Erysipelotrichaceae
bacterium 3_1_53]
gi|308913959|gb|EFP59770.1| efflux ABC transporter, permease protein [Erysipelotrichaceae
bacterium 3_1_53]
Length = 407
Score = 38.6 bits (87), Expect = 0.94, Method: Composition-based stats.
Identities = 35/262 (13%), Positives = 83/262 (31%), Gaps = 12/262 (4%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGV-MALIVVMSVMNGFREDMIK 59
M + + +RYL + + + I +++G M L +E
Sbjct: 1 MKFYQ-----LGFRYLQRKKGKTILLLIVLILVNSMILGTSMILRTTNESKQAMQEKTNS 55
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
+++ + + + + + + + S+ + +
Sbjct: 56 KIVAEITSKDSKITENEVNKIETLEDVSSINRIGRQEVFPNDFAPVTLNTSTNEENLKIA 115
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDF--DRGKGVIIGKDLARNLGISIGDKINI---LSPY 174
+S D Y S D+ KG +I +LA + +GD I +
Sbjct: 116 LLSYDDLEKDSPFSEMQYRLSSGDYIKHEKKGAVINANLANQNELKVGDTIELSTENGTK 175
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
V +G+ + + + + V++ + F E + V+ K P
Sbjct: 176 VSVQIIGIFMSAGNVEKDQPTETTAVNRIENQVFIDNSTYKELF-KEAEFEKLCVYSKRP 234
Query: 235 DAIEKTHENIVRILGNGVVVID 256
+ ++ ++ +I GN V +
Sbjct: 235 EKLDVLETSLQKIFGNDVELST 256
>gi|331652078|ref|ZP_08353097.1| hypothetical membrane protein [Escherichia coli M718]
gi|331050356|gb|EGI22414.1| hypothetical membrane protein [Escherichia coli M718]
Length = 436
Score = 38.6 bits (87), Expect = 0.94, Method: Composition-based stats.
Identities = 42/275 (15%), Positives = 88/275 (32%), Gaps = 22/275 (8%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVM---------NGF 53
+F +V A+ LF +++ +F S + I GV I + + S N
Sbjct: 24 LFYSRDVKFAFLNLFRHKRRSF-STITAIVLGGVAIFLYGGFIDYSFWILKEQTIRTNIG 82
Query: 54 REDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGG 113
+ + + + I + D+ + + +S S
Sbjct: 83 HVQIYNQHYFETSNKNKSLIADYAALKKAILSDPTLAADISTLSGQLEFTGVISHYESET 142
Query: 114 SGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSP 173
S + SF + +G + +G LA+ L D ++++
Sbjct: 143 SSYFSALGVEPLPALKLGSFDKIIAGSDLSRVKGDEITLGSGLAKTLNAKYDDWLDVMVV 202
Query: 174 YGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKD 233
+ ++ + F DYD+ + + L AQ + VS + + +K+
Sbjct: 203 NTAGGQGALSLKMRGI-----FESGIKDYDDVAMKIPLDTAQRMMGT-DGVSKVLILLKE 256
Query: 234 PDAIEKTHENIVRILGNG---VVVIDWQQRYQIFF 265
D + + + +VV DW+ F
Sbjct: 257 -DDTAAFSAKLRQFIERNHLPLVVKDWRDV--SLF 288
>gi|37520343|ref|NP_923720.1| hypothetical protein gll0774 [Gloeobacter violaceus PCC 7421]
gi|35211336|dbj|BAC88715.1| gll0774 [Gloeobacter violaceus PCC 7421]
Length = 446
Score = 38.6 bits (87), Expect = 0.94, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+AW L +N+ S ++ +GV+IG+ A+I ++++ G + +
Sbjct: 42 LAWGSLLANKLR------SALTMLGVIIGIAAVIAMVAIGRGAQAQTEAQ 85
>gi|255037687|ref|YP_003088308.1| hypothetical protein Dfer_3939 [Dyadobacter fermentans DSM 18053]
gi|254950443|gb|ACT95143.1| protein of unknown function DUF214 [Dyadobacter fermentans DSM
18053]
Length = 414
Score = 38.6 bits (87), Expect = 0.94, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 30/77 (38%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
+ +S +GV +G+ A++ V ++++ + + I V+ QK+ ++ +
Sbjct: 26 TILSLLGVTVGIFAIVAVFTIVDSLERSIRDSLSFIGDKVIYVQKWPWGFGGEYQWWKYF 85
Query: 89 FIPDVIKVLPFVSGQAF 105
P+
Sbjct: 86 QWPEPTFAEYKYLYDNM 102
>gi|154503119|ref|ZP_02040179.1| hypothetical protein RUMGNA_00943 [Ruminococcus gnavus ATCC
29149]
gi|153796113|gb|EDN78533.1| hypothetical protein RUMGNA_00943 [Ruminococcus gnavus ATCC
29149]
Length = 464
Score = 38.6 bits (87), Expect = 0.94, Method: Composition-based stats.
Identities = 11/44 (25%), Positives = 24/44 (54%), Gaps = 6/44 (13%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
L + F ++ +GV+IG +++V++S+ G +E M +
Sbjct: 6 LKRRKLRTF------LTVLGVVIGTASIVVMISLGLGLQESMYQ 43
>gi|153869090|ref|ZP_01998781.1| Integral membrane protein [Beggiatoa sp. PS]
gi|152074350|gb|EDN71213.1| Integral membrane protein [Beggiatoa sp. PS]
Length = 445
Score = 38.6 bits (87), Expect = 0.94, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 221 ENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRY 261
++ + +E+F+ +P + I LG V V W +Y
Sbjct: 262 KDHFNYLELFLYNPLKASDFAKEIKEALGENVSVSVWSDKY 302
>gi|116620843|ref|YP_822999.1| hypothetical protein Acid_1724 [Candidatus Solibacter usitatus
Ellin6076]
gi|116224005|gb|ABJ82714.1| protein of unknown function DUF214 [Candidatus Solibacter usitatus
Ellin6076]
Length = 420
Score = 38.6 bits (87), Expect = 0.95, Method: Composition-based stats.
Identities = 14/97 (14%), Positives = 36/97 (37%), Gaps = 6/97 (6%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+++A L +++ +F ++ +GV+IG +I V S++ G + ++
Sbjct: 13 LLLAMDTLRTHKFRSF------LTVLGVLIGTTTVIAVTSIIAGLDKQLVDVAEQFGTRT 66
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAF 105
+ K + P + + Q+
Sbjct: 67 LWVYKLQMGAPHAMTREERLRKPLTYEDAMAIKEQSP 103
>gi|158321634|ref|YP_001514141.1| hypothetical protein Clos_2614 [Alkaliphilus oremlandii OhILAs]
gi|158141833|gb|ABW20145.1| protein of unknown function DUF214 [Alkaliphilus oremlandii OhILAs]
Length = 442
Score = 38.6 bits (87), Expect = 0.96, Method: Composition-based stats.
Identities = 32/228 (14%), Positives = 68/228 (29%), Gaps = 11/228 (4%)
Query: 27 IASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV--LGINGHVVIQQKYYPLVDYQFIA 84
S ++ +GV IGV +++ +M + G R ++I++ LG N + +
Sbjct: 32 FRSALTILGVAIGVASVVSLMGIGEGARRNVIEQFESLGTNVISIKANLSNFEFKPEKAQ 91
Query: 85 NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDF 144
++ + + P V + +V + N + + +
Sbjct: 92 ELVERVSGIEMATPVVQTYTNMKWRRDRSEVDIVGVNPSFPAIRDHNLAAGQFFTDLHVE 151
Query: 145 DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDN 204
R +IG ++ K+ T G + +L D +
Sbjct: 152 QRSYVAVIGSNV--------SKKLVGTRNLIGQTINLDGQSYRILGILAPKGKDKADNID 203
Query: 205 GMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGV 252
+ + AQ V I + E + RI +
Sbjct: 204 DKIIIPYTTAQRIAGKR-TVEEIWAKASSAEDAELATIQLGRIFKKEL 250
>gi|301057002|gb|ADK54827.1| hypothetical protein [uncultured soil bacterium]
Length = 398
Score = 38.6 bits (87), Expect = 0.97, Method: Composition-based stats.
Identities = 26/235 (11%), Positives = 63/235 (26%), Gaps = 9/235 (3%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
L + R + +S +G+ IGV A++ V+ + + ++ + + +++
Sbjct: 22 LRTRRMR------AALSALGISIGVAAMVAVLGLSASSQAGLLAEIDKLGTNLLTVTPGQ 75
Query: 76 PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSR 135
L P +I + V + N++ + +
Sbjct: 76 MLGGGDAKLP--QDAPAMIARVGPVETVQSTGKTKANAFRSPYIKSINTNAITVSAASLD 133
Query: 136 FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMF 195
V RG + + + Y +
Sbjct: 134 LPAAVRTTVARGNYLNAATAEQPVAVLGSAAAKRLGIAKVHPDARIWVGGQWFYIAGVLN 193
Query: 196 RMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN 250
+ V + A+ Y N + S + V D D + + + +
Sbjct: 194 SATLAPELDSSVLVGYPAARKYLNFDGHPSMVYVR-SDTDQVNEVRDVLAATANP 247
>gi|301060322|ref|ZP_07201185.1| efflux ABC transporter, permease protein [delta proteobacterium
NaphS2]
gi|300445518|gb|EFK09420.1| efflux ABC transporter, permease protein [delta proteobacterium
NaphS2]
Length = 405
Score = 38.6 bits (87), Expect = 0.97, Method: Composition-based stats.
Identities = 9/44 (20%), Positives = 28/44 (63%)
Query: 26 SIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+ + +S G++IGV ++I++++V G +++R+ + +++
Sbjct: 18 RLRTALSLSGIVIGVASVIIMLAVGMGAERKIVERIEAMGTNLI 61
>gi|148257446|ref|YP_001242031.1| macrolide ABC transporter ATP-binding/membrane protein
[Bradyrhizobium sp. BTAi1]
gi|146409619|gb|ABQ38125.1| putative macrolide ABC transporter, fusion of ATP-binding and
membrane domains [Bradyrhizobium sp. BTAi1]
Length = 654
Score = 38.6 bits (87), Expect = 0.98, Method: Composition-based stats.
Identities = 27/207 (13%), Positives = 66/207 (31%), Gaps = 3/207 (1%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
+F++ +G++IGV ++++V+++ G + ++K + + + + D + R
Sbjct: 277 AFLTMLGIIIGVASVVLVLALGKGSQARVLKDINRLGTNTLEFFPGKDFGDTRANKIRTL 336
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
+ D + A +S+ + ++ S + + R +
Sbjct: 337 VLADAKVMAEQPYVDAISPTVSTTSTLRFGAIEVSAQVSGVGEQYFRVKNTELAEGSYLD 396
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVL---GMFRMRFPDYDNG 205
+ + K P + I V+ + F
Sbjct: 397 ADTVRSYAQDAVIDDNARKALFPDPDVSPLGSVVLIGKVPCRVVGVTKQQQAGFGSSSTP 456
Query: 206 MVYMSLQEAQLYFNLENAVSGIEVFVK 232
+VY+ Q F + I V V
Sbjct: 457 IVYLPYTTVQARFIGNQVLRSISVRVD 483
>gi|94971402|ref|YP_593450.1| ABC efflux pump, inner membrane subunit [Candidatus Koribacter
versatilis Ellin345]
gi|94553452|gb|ABF43376.1| ABC efflux pump, inner membrane subunit [Candidatus Koribacter
versatilis Ellin345]
Length = 437
Score = 38.6 bits (87), Expect = 0.98, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
L +++ +F ++ +GV+IGV A I V S++ GF M + + + + Q++
Sbjct: 36 LRNHKMRSF------LTVLGVVIGVAAQIFVASILVGFDSSMREMLESFGANTLFIQRFN 89
Query: 76 PLVD 79
P +
Sbjct: 90 PGIH 93
>gi|228469679|ref|ZP_04054647.1| FtsX family membrane protein [Porphyromonas uenonis 60-3]
gi|228308698|gb|EEK17424.1| FtsX family membrane protein [Porphyromonas uenonis 60-3]
Length = 419
Score = 38.6 bits (87), Expect = 0.98, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M +F R A+ L +NRK S + G+ G++ L+++MS+ GF M K+
Sbjct: 1 MRLFDRDIWGEAFHSLRTNRKR------SIATAFGIFWGILMLVILMSLSQGFSNGMRKQ 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLD 88
+ GI+ + + Y+
Sbjct: 55 LGGISSNTTMLYCSTTSKPYKGFPTDRW 82
>gi|126656764|ref|ZP_01727978.1| DevC protein [Cyanothece sp. CCY0110]
gi|126621984|gb|EAZ92692.1| DevC protein [Cyanothece sp. CCY0110]
Length = 384
Score = 38.6 bits (87), Expect = 0.98, Method: Composition-based stats.
Identities = 34/269 (12%), Positives = 79/269 (29%), Gaps = 20/269 (7%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMI--KR 60
+ + + AW L R + + G+ V+ + + + MN + R
Sbjct: 1 MILQIPL--AWLILVKERSRLLV------AIAGIAFAVILIFMQLGFMNALYDSATAPHR 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
L + ++ Q F RL V V + + R
Sbjct: 53 NLKADLVLLNPQSEVLFSLRSFPRIRLYQAQRVEGVELVNFLYSRLGN-WKNPQTRRTRS 111
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
I F + +F N + + + +I L+R I +
Sbjct: 112 ILMLGFDPSRPAFQFPGVNENLEALKKPDRVIFDQLSRPEFGPIAETFQNNQFVETEVNG 171
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ +++ F + ++ + + ++ + + +K +K
Sbjct: 172 TRIQVAGLFSMGTSFSADGHAITSDTTFLHIFKQSQQSQIDLGL----ITLKSGFEPQKV 227
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCYE 269
+ + + L N V V+ + F+ E
Sbjct: 228 IKELSKALPNDVKVMTVDE-----FAALE 251
>gi|309790834|ref|ZP_07685378.1| protein of unknown function DUF214 [Oscillochloris trichoides
DG6]
gi|308227121|gb|EFO80805.1| protein of unknown function DUF214 [Oscillochloris trichoides
DG6]
Length = 416
Score = 38.6 bits (87), Expect = 0.99, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F +VI+A L +N+ S ++ +G++IG L+ V+S+ N + + ++ +
Sbjct: 1 MFKE-QVIMALESLGANK------FRSLLTMLGIIIGAGTLVAVLSLGNSLQGQVFEQFI 53
Query: 63 GIN 65
+
Sbjct: 54 DLG 56
>gi|222094158|ref|YP_002528215.1| ABC transporter , permease protein [Bacillus cereus Q1]
gi|221238213|gb|ACM10923.1| ABC transporter, permease protein [Bacillus cereus Q1]
Length = 399
Score = 38.6 bits (87), Expect = 0.99, Method: Composition-based stats.
Identities = 22/246 (8%), Positives = 77/246 (31%), Gaps = 10/246 (4%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A + +++ S ++ +G++IGV ++I V+++ G + + G
Sbjct: 6 SIKIALSSILAHKLR------SALTMLGIIIGVGSIITVVAIGQGGESMLKSQFAGSGNQ 59
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
V + D + + +++ S + +
Sbjct: 60 TVQIHYSADMNDPFGMKMVEAPKITEEDIFEIKKISEITHVVTTNSSMEPLDIEDKKEMV 119
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVI---IGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ S ++ +G+ + + + + ++ + +
Sbjct: 120 SITGLDSEYFAVNKVKLLKGRSLQESDVDQGNNVVMISKQMEEKVFKDANPVGKIIEIKG 179
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + F + + + + + ++ + I V K+ + +EK +
Sbjct: 180 QPMQIIGIYKSDSEFMGMGTSEILIPISLWPILYG-KDEIQNISVQAKNVNDLEKAGKKA 238
Query: 245 VRILGN 250
+L +
Sbjct: 239 ADVLNS 244
>gi|160933822|ref|ZP_02081210.1| hypothetical protein CLOLEP_02684 [Clostridium leptum DSM 753]
gi|156867699|gb|EDO61071.1| hypothetical protein CLOLEP_02684 [Clostridium leptum DSM 753]
Length = 386
Score = 38.6 bits (87), Expect = 0.99, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
++++ R +++N+ +F ++ +G++IGVMA+++++S+ + + +
Sbjct: 6 IMLSLRAIYNNKMRSF------LTMLGIIIGVMAVVILVSITQNATSGITDSIASMGSDQ 59
Query: 69 V 69
+
Sbjct: 60 I 60
>gi|206974220|ref|ZP_03235137.1| ABC transporter, permease protein [Bacillus cereus H3081.97]
gi|217957959|ref|YP_002336503.1| ABC transporter, permease protein [Bacillus cereus AH187]
gi|206747460|gb|EDZ58850.1| ABC transporter, permease protein [Bacillus cereus H3081.97]
gi|217067048|gb|ACJ81298.1| ABC transporter, permease protein [Bacillus cereus AH187]
Length = 399
Score = 38.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 22/246 (8%), Positives = 77/246 (31%), Gaps = 10/246 (4%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A + +++ S ++ +G++IGV ++I V+++ G + + G
Sbjct: 6 SIKIALSSILAHKLR------SALTMLGIIIGVGSIITVVAIGQGGESMLKSQFAGSGNQ 59
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
V + D + + +++ S + +
Sbjct: 60 TVQIHYSADMNDPFGMEMVEAPKITEEDIFEIKKISEITHVVTTNSSMEPLDIEDKKEMV 119
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVI---IGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ S ++ +G+ + + + + ++ + +
Sbjct: 120 SITGLDSEYFAVNKVKLLKGRSLQESDVDQGNNVVMISKQMEEKVFKDANPVGKIIEIKG 179
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + F + + + + + ++ + I V K+ + +EK +
Sbjct: 180 QPMQIIGIYKSDSEFMGMGTSEILIPISLWPILYG-KDEIQNISVQAKNVNDLEKAGKKA 238
Query: 245 VRILGN 250
+L +
Sbjct: 239 ADVLNS 244
>gi|139436897|ref|ZP_01771057.1| Hypothetical protein COLAER_00028 [Collinsella aerofaciens ATCC
25986]
gi|133776544|gb|EBA40364.1| Hypothetical protein COLAER_00028 [Collinsella aerofaciens ATCC
25986]
Length = 404
Score = 38.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 10/49 (20%), Positives = 26/49 (53%), Gaps = 6/49 (12%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
A L +N+ S ++ +G++IG+ ++I + S++ G + ++
Sbjct: 10 ALHSLEANKGR------SLLTILGIVIGIASVIAMTSLIGGIQNSLVNS 52
>gi|89889566|ref|ZP_01201077.1| ABC transporter protein, FtsX family, permease component
[Flavobacteria bacterium BBFL7]
gi|89517839|gb|EAS20495.1| ABC transporter protein, FtsX family, permease component
[Flavobacteria bacterium BBFL7]
Length = 419
Score = 38.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 32/261 (12%), Positives = 72/261 (27%), Gaps = 18/261 (6%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FSR L +N+ F ++ GV G+ L+ ++++ NG R +
Sbjct: 1 MFSRDRWNEILEALNANKLRTF------LTAFGVFWGIFILVALLALTNGLRTGVTTGFA 54
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ + + Y+ + + V + +S RG +
Sbjct: 55 NGATNSMFMWGQSTSMAYKGLNKGRPVQFKLEDVEALKQTIPALQYVSPRLQLGGYRGAN 114
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINI------------ 170
N + +F + +I G+ L + +
Sbjct: 115 NVTRNEKTGAFGIYGDYPEYIHQEYMDIIKGRWLNYSDINEKMKTAVVGTDVVKSLYDIG 174
Query: 171 LSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVF 230
P G + + + +++ FN N V + +
Sbjct: 175 EEPIGTYIKINGVNFKVVGVFQNPNTQGDSEEEANNIFIPFTSFANAFNTGNNVGWMAIT 234
Query: 231 VKDPDAIEKTHENIVRILGNG 251
D +I I+ ++
Sbjct: 235 AYDHTSITTLKPQILSLMREQ 255
>gi|227872160|ref|ZP_03990529.1| ABC superfamily ATP binding cassette transporter protein
[Oribacterium sinus F0268]
gi|227841989|gb|EEJ52250.1| ABC superfamily ATP binding cassette transporter protein
[Oribacterium sinus F0268]
Length = 453
Score = 38.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
++A L + + ++ +GV+IG +++V++S+ G E +++
Sbjct: 7 FLLAINNLKRRK------FRTVLTVLGVVIGTSSIVVMVSLGLGMSESLLQSF 53
>gi|191167609|ref|ZP_03029420.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli B7A]
gi|190902370|gb|EDV62108.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli B7A]
Length = 648
Score = 38.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 30/270 (11%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + M +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVIMVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|303232645|ref|ZP_07319330.1| efflux ABC transporter, permease protein [Atopobium vaginae
PB189-T1-4]
gi|302481131|gb|EFL44206.1| efflux ABC transporter, permease protein [Atopobium vaginae
PB189-T1-4]
Length = 454
Score = 38.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 31/75 (41%), Gaps = 6/75 (8%)
Query: 13 WRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQ 72
WR L +N+ S ++ +G++IG+ A+I + S++ G + + ++
Sbjct: 11 WRSLTNNKGR------SALTILGIVIGIAAVISMTSLVGGIQLSLSSTFGLNQSKLIYTN 64
Query: 73 KYYPLVDYQFIANRL 87
+ + L
Sbjct: 65 LFGNYTLSKSDIEEL 79
>gi|269216630|ref|ZP_06160484.1| ABC transporter, permease protein [Slackia exigua ATCC 700122]
gi|269130159|gb|EEZ61241.1| ABC transporter, permease protein [Slackia exigua ATCC 700122]
Length = 384
Score = 38.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 22/153 (14%), Positives = 53/153 (34%), Gaps = 10/153 (6%)
Query: 1 MSIFSRF-EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
M + E + + N+ + ++ +G++IG+ ++IV++ + +G + + +
Sbjct: 1 MKLIQMLRESFL---NVMRNKLR------TALTMLGLIIGIASVIVLVGIGDGSNKQVAE 51
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
R+ + G+V+ Y + + P + A VS + V
Sbjct: 52 RIQSLGGNVISAFTYSGGDMTYSDIENIRAKEHIATATPSKNINADVSVNHRKLTQASVN 111
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVII 152
+ + + D D V I
Sbjct: 112 ATDENYLEARNLDLAEGRNLSAVDRDNKSKVCI 144
>gi|220919389|ref|YP_002494693.1| protein of unknown function DUF214 [Anaeromyxobacter dehalogenans
2CP-1]
gi|219957243|gb|ACL67627.1| protein of unknown function DUF214 [Anaeromyxobacter dehalogenans
2CP-1]
Length = 413
Score = 38.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 29/234 (12%), Positives = 65/234 (27%), Gaps = 15/234 (6%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANR-- 86
S ++ +G++IG ++ +MS+ G R M + QK+ + +
Sbjct: 22 SMLTLLGIVIGACTVVAMMSLTEGLRLKMTTDFAMLGAGAFQVQKWPHMNFGPIDWRKYE 81
Query: 87 ------------LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFS 134
L +P V V +G + + + L +
Sbjct: 82 QRKPLTREQGEALRSLPHVKFVSIEEYPSGDGNGAAVVSTPERATRREVAFGGVLPDYEP 141
Query: 135 RFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGM 194
V ++ +G + D + G+ + V
Sbjct: 142 ANGVTVGQGRFISTTDVLLGRRVTFVGTDVVDVLFPKMDPIGREVRIRGVPFEIIGVSMK 201
Query: 195 FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
F + + ++ F N + I + P+ + + +V L
Sbjct: 202 QGSIFGQSKDSWAVVPWTAYEVAFGR-NRNNNIAIQATSPEDLPLAMDEVVAAL 254
>gi|163846573|ref|YP_001634617.1| hypothetical protein Caur_0996 [Chloroflexus aurantiacus J-10-fl]
gi|222524364|ref|YP_002568835.1| hypothetical protein Chy400_1087 [Chloroflexus sp. Y-400-fl]
gi|163667862|gb|ABY34228.1| protein of unknown function DUF214 [Chloroflexus aurantiacus
J-10-fl]
gi|222448243|gb|ACM52509.1| protein of unknown function DUF214 [Chloroflexus sp. Y-400-fl]
Length = 416
Score = 38.6 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+A+ L +N+ S ++ +GV+IG L+ V+S+ N + + ++
Sbjct: 8 MAFDSLRANK------FRSLLTMLGVIIGAGTLVAVLSLGNALQGQVFEQF 52
>gi|152999151|ref|YP_001364832.1| ABC transporter-like protein [Shewanella baltica OS185]
gi|160873758|ref|YP_001553074.1| ABC transporter-like protein [Shewanella baltica OS195]
gi|151363769|gb|ABS06769.1| ABC transporter related [Shewanella baltica OS185]
gi|160859280|gb|ABX47814.1| ABC transporter related [Shewanella baltica OS195]
gi|315265983|gb|ADT92836.1| ABC transporter related protein [Shewanella baltica OS678]
Length = 648
Score = 38.6 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 27/250 (10%), Positives = 79/250 (31%), Gaps = 6/250 (2%)
Query: 5 SRFEVIVAW-RYLFSNRKNAFI----SIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
S+ + W RYL + + + +F++ +G++IG+ +++ V+++ G ++ ++
Sbjct: 244 SKTSKKINWSRYLEALKMALIAMSNHRLRTFLTMLGIIIGIASVVSVVALGAGSQQSILD 303
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
+ + + + + D + R D + + + + +
Sbjct: 304 NIASMGTNTIEIKPGTGRGDRRSERVRSLTADDANALKILPYVDSVTPTVRTNVAIRYAS 363
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYG-DVT 178
+ + R G I + + D+
Sbjct: 364 ETVTGSIQGVGTEYFRVRGYALAKGQYFADDSIDTLEQVAVIDANTDQTLFPDGNALGSV 423
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+ + V + + D V++ +N V+ I V + + +
Sbjct: 424 IFLGRLPVRIIGVTKPIQSVSDNSDELNVWLPYTTVSGRIFRQNYVNDITVRIDANVSSD 483
Query: 239 KTHENIVRIL 248
+ I+ +L
Sbjct: 484 AAEQGIISLL 493
>gi|325685040|gb|EGD27178.1| ABC superfamily ATP binding cassette transporter ATP-binding and
permease [Lactobacillus delbrueckii subsp. lactis DSM
20072]
Length = 666
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
MS+F + A++ + + + G+ IG+M++I+++S+ G + +
Sbjct: 245 MSLFKAISL--AFKNMKAKFGRNA------LVSTGMGIGIMSVILMLSLGKGVTSYVSGQ 296
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDF 89
+ + +V + + + +
Sbjct: 297 MSTYSNPLVAEIQKTSSQKMRQQGMQAQQ 325
>gi|313124703|ref|YP_004034962.1| ABC antimicrobial peptide transporter ATPase [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|312281266|gb|ADQ61985.1| ABC-type antimicrobial peptide transport system, ATPase component
[Lactobacillus delbrueckii subsp. bulgaricus ND02]
Length = 666
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
MS+F + A++ + + + G+ IG+M++I+++S+ G + +
Sbjct: 245 MSLFKAISL--AFKNMKAKFGRNA------LVSTGMGIGIMSVILMLSLGKGVTSYVSGQ 296
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDF 89
+ + +V + + + +
Sbjct: 297 MSTYSNPLVAEIQKTSSQKMRQQGMQAQQ 325
>gi|300812520|ref|ZP_07092942.1| ABC transporter, ATP-binding protein [Lactobacillus delbrueckii
subsp. bulgaricus PB2003/044-T3-4]
gi|300496499|gb|EFK31599.1| ABC transporter, ATP-binding protein [Lactobacillus delbrueckii
subsp. bulgaricus PB2003/044-T3-4]
Length = 666
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 36/89 (40%), Gaps = 8/89 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
MS+F + A++ + + + G+ IG+M++I+++S+ G + +
Sbjct: 245 MSLFKAISL--AFKNMKAKFGRNA------LVSTGMGIGIMSVILMLSLGKGVTSYVSGQ 296
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDF 89
+ + +V + + + +
Sbjct: 297 MSTYSNPLVAEIQKTSSQKMRQQGMQAQQ 325
>gi|269958661|ref|YP_003328448.1| phosphate ABC transporter permease [Anaplasma centrale str. Israel]
gi|269848490|gb|ACZ49134.1| phosphate ABC transporter permease [Anaplasma centrale str. Israel]
Length = 415
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 30/233 (12%), Positives = 73/233 (31%), Gaps = 6/233 (2%)
Query: 14 RYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQK 73
R ++K+ +S+ S + +G+ +GV+ L++ V NG++ ++L V
Sbjct: 17 RVFIRSKKDRLLSVLSLGA-LGISVGVLILVLCSIVNNGYKALTTTKILLSFDEVERVDP 75
Query: 74 Y---YPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
+ V Q+I + L+ + L + + S + + +
Sbjct: 76 DDSAFRSVCIQYIQDALERVVQNSVDLGNHETRRIAHSVISETAHYDLANLIKKGTQLSN 135
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
S + G V+ + + + + + + + +
Sbjct: 136 TSVWFNASSDFVSSIPGNNVVYDAIMQKLVAENRVKRFFNSALFTSSHSKVPESAGITGA 195
Query: 191 VLGMFRMRFP--DYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
++G + MS Q S IEV + + ++
Sbjct: 196 LIGSLLTIMVCLALAIPVGVMSGICMQELLKRGKLASMIEVSINNLSSVPSII 248
>gi|213692843|ref|YP_002323429.1| protein of unknown function DUF214 [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|213524304|gb|ACJ53051.1| protein of unknown function DUF214 [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|320459014|dbj|BAJ69635.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis ATCC 15697]
Length = 507
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 8/50 (16%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMI 58
+ + + L+ + + ++ +GV++G ++++++S+ G E M
Sbjct: 7 LRLCRQNLWRRKSR------TILTVLGVIVGCCSIVLMVSLGQGINEQMN 50
>gi|116749924|ref|YP_846611.1| hypothetical protein Sfum_2497 [Syntrophobacter fumaroxidans MPOB]
gi|116698988|gb|ABK18176.1| protein of unknown function DUF214 [Syntrophobacter fumaroxidans
MPOB]
Length = 422
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 37/253 (14%), Positives = 80/253 (31%), Gaps = 18/253 (7%)
Query: 23 AFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYP------ 76
I+ + + + LI S+M GF + ++ V +
Sbjct: 18 TAIT------MSAIALNTLILITTYSLMGGFLKQTVRNVTQLATGEAQLHAPGYLSDRSL 71
Query: 77 LVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRF 136
L + + + + + +G L +G+ + +
Sbjct: 72 YKRIAHPRILLQALGEHSIGAAPRTYGYGLVSRGTKSAGALFQGVEPAMEAAAFELAGHL 131
Query: 137 YGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFR 196
KG+++G+ LA++L +G +I +L D + +TV+G+
Sbjct: 132 AQGTFLAPAARKGLVLGRKLAKSLNAEVGSEIVVLVQAADGSLGNDL-----FTVVGILG 186
Query: 197 MRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
D M L + + F + + I V + ++ E + R+ V
Sbjct: 187 AVGEAIDRNAAMMHLDDFRQLFAMPEGIHEIAVNTRGRLPLDALVETLSRLAPGD-EVRT 245
Query: 257 WQQRYQIFFSCYE 269
W++ F E
Sbjct: 246 WRRLLPTFSDMIE 258
>gi|315222664|ref|ZP_07864553.1| efflux ABC transporter, permease protein [Streptococcus anginosus
F0211]
gi|315188350|gb|EFU22076.1| efflux ABC transporter, permease protein [Streptococcus anginosus
F0211]
Length = 426
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 27/57 (47%), Gaps = 8/57 (14%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ A + ++ +F ++ +G++IGVM+++V++++ +G
Sbjct: 1 MMQN--WKFAINSIMGHKMRSF------LTMLGIIIGVMSVVVIVALGSGMSNAFTD 49
>gi|302386561|ref|YP_003822383.1| protein of unknown function DUF214 [Clostridium saccharolyticum
WM1]
gi|302197189|gb|ADL04760.1| protein of unknown function DUF214 [Clostridium saccharolyticum
WM1]
Length = 453
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 34/82 (41%), Gaps = 6/82 (7%)
Query: 15 YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKY 74
L + F ++ +GV+IG +++V++S+ GF E ++++ I
Sbjct: 13 NLRRRKLRTF------LTVLGVLIGTASIVVMVSLGIGFNELTMEQIASYGSLTEISVYS 66
Query: 75 YPLVDYQFIANRLDFIPDVIKV 96
+ + +++ D +
Sbjct: 67 NAMWGGNENSKDPNYMTDDVIA 88
>gi|323172150|gb|EFZ57788.1| macrolide export ATP-binding/permease protein macB [Escherichia
coli LT-68]
Length = 648
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 30/270 (11%), Positives = 89/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + D + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVDEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|325126601|gb|ADY85931.1| ABC transporter, ATP-binding and permease protein [Lactobacillus
delbrueckii subsp. bulgaricus 2038]
Length = 665
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 35/89 (39%), Gaps = 8/89 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
MS+F + A++ + + + G+ IG+M++I+++S+ G +
Sbjct: 245 MSLFKAISL--AFKNMKAKFGRNA------LVSTGMGIGIMSVILMLSLGKGVTSYFSGQ 296
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDF 89
+ + +V + + + +
Sbjct: 297 MNTYSNPLVAEIQKTSSQKMRQQGMQAQQ 325
>gi|282882310|ref|ZP_06290941.1| ABC transporter, permease protein [Peptoniphilus lacrimalis 315-B]
gi|281297860|gb|EFA90325.1| ABC transporter, permease protein [Peptoniphilus lacrimalis 315-B]
Length = 1341
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 43/269 (15%), Positives = 89/269 (33%), Gaps = 16/269 (5%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F V R LF ++K F+++ G+M G AL+V+ + G D+
Sbjct: 965 MSFLFKVTARNLFHSKKRMFMTVI------GIM-GCTALLVLGFGIKGSVADIEDLQFSQ 1017
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ Y +D N +FI + + Q + L + +
Sbjct: 1018 IIKYDLAISYDRDIDEDDFKNYKEFINN-SSLDRGKFYQEQFTVEYPKMDQSLNLIVPSD 1076
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + R G+G +I + L++ L I GD + I Y + + +
Sbjct: 1077 IDDFSKFFSIRNPKTRKAINLDGRGAVISQKLSKLLHIKKGDILKIRDAYDNEFEVEVKD 1136
Query: 185 RSKSYTVLGMF-------RMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
+ Y +F +++ + ++ + NL+N V +V V
Sbjct: 1137 ICEMYITHYIFMNKDYYEKIKGEKFTTNTDFIKNINDKEMKNLKNKVINYKV-VTSVVGA 1195
Query: 238 EKTHENIVRILGNGVVVIDWQQRYQIFFS 266
+ + + + L + V +
Sbjct: 1196 DIFRKALNQFLYSIEKVEGIIVMMSSLLA 1224
>gi|116514891|ref|YP_813797.1| peptide ABC transporter ATPase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|116094206|gb|ABJ59359.1| ABC-type antimicrobial peptide transport system, ATPase component
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
Length = 665
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 35/89 (39%), Gaps = 8/89 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
MS+F + A++ + + + G+ IG+M++I+++S+ G +
Sbjct: 245 MSLFKAISL--AFKNMKAKFGRNA------LVSTGMGIGIMSVILMLSLGKGVTSYFSGQ 296
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDF 89
+ + +V + + + +
Sbjct: 297 MNTYSNPLVAEIQKTSSQKMRQQGMQAQQ 325
>gi|322376350|ref|ZP_08050843.1| putative ABC transporter, permease protein [Streptococcus sp. M334]
gi|321282157|gb|EFX59164.1| putative ABC transporter, permease protein [Streptococcus sp. M334]
Length = 419
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 26/249 (10%), Positives = 77/249 (30%), Gaps = 11/249 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ A+ + +++ S ++ IG++IGV +++V+M++ + + K + ++
Sbjct: 4 LKFAFSSIMAHKMR------SLLTMIGIIIGVSSVVVIMALGDSMSRQLNKNMTRSQKNI 57
Query: 69 VIQQKYYP----LVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + A + + + V P +++V + +++
Sbjct: 58 SVFFSSKKSKDGSFTQKQSAFTVSGKEEEVHVEPPKPQESWVKEAAKLKGVDNYYVTNST 117
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ N++ + + LA K D
Sbjct: 118 NAILTYKDKKVENANLTGGNRTYMEAVNNEILAGRSLREQDFKEFASVILLDEELSISLF 177
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQE-AQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
S + + + Y VY S + + L + + +++
Sbjct: 178 GSPQEAINKVVEVNGFSYRVIGVYTSQESKNSKMYGLGGLPITTNISLAANFNVDEIANI 237
Query: 244 IVRILGNGV 252
+ R+ +
Sbjct: 238 VFRVNDTSL 246
>gi|163787636|ref|ZP_02182083.1| hypothetical protein FBALC1_03817 [Flavobacteriales bacterium
ALC-1]
gi|159877524|gb|EDP71581.1| hypothetical protein FBALC1_03817 [Flavobacteriales bacterium
ALC-1]
Length = 417
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 27/257 (10%), Positives = 76/257 (29%), Gaps = 20/257 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
A L +N+ F+S+ GV +G+ ++I V++ ++ +++ + G++ +
Sbjct: 11 SFSFALNALRNNKLRTFLSLI------GVTVGIFSIIAVLAAVDSLDKNIKDNLSGLDKN 64
Query: 68 VVIQQKY-------YPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ KY F D + + +P + A+ +
Sbjct: 65 TIYLTKYSFGPTEIPRWKRDNFPQTEYDAFDFIRRSVPDIDAVAYTIFGGTETIRYQAET 124
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+S + + + + + +
Sbjct: 125 VSGVAIDPVSDEIYKINDFKVEKGRFYGESESESGAPVIVLGYTIAENLFGDSNPIGKKV 184
Query: 181 GMGIRSKSYTVLG-MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGI--EVFVKDPDAI 237
R + + F D + Y+ + + + N V+G+ + +K +
Sbjct: 185 RAFGRKLTVIGVIKKFGASIFDSPDERAYVPVNFVRRFRN--GGVNGLPGAIIIKPSSDV 242
Query: 238 EKTHENIVRILGNGVVV 254
+ + ++L
Sbjct: 243 D--ISSFEQVLKQKFRA 257
>gi|193064631|ref|ZP_03045710.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli E22]
gi|194428396|ref|ZP_03060937.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli B171]
gi|260843130|ref|YP_003220908.1| fused macrolide transporter subunits of ABC superfamily:
ATP-binding component/membrane component [Escherichia
coli O103:H2 str. 12009]
gi|192927688|gb|EDV82303.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli E22]
gi|194413611|gb|EDX29892.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli B171]
gi|257758277|dbj|BAI29774.1| fused macrolide transporter subunits of ABC superfamily:
ATP-binding component/membrane component [Escherichia
coli O103:H2 str. 12009]
Length = 648
Score = 38.2 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 30/270 (11%), Positives = 89/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ +T + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAETEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|323159504|gb|EFZ45484.1| macrolide export ATP-binding/permease protein macB [Escherichia
coli E128010]
Length = 648
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 30/270 (11%), Positives = 89/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ +T + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAETEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|254694335|ref|ZP_05156163.1| macrolide export ATP-binding/permease protein macB [Brucella
abortus bv. 3 str. Tulya]
Length = 381
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 9/60 (15%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A L +N + ++ +G++IGV +++ ++++ G + ++ R+ + ++
Sbjct: 264 KMALHALRAN------IFRTVLTLLGIIIGVSSVVTMLAIGTGAQNTILDRINAMGTDLI 317
>gi|189024766|ref|YP_001935534.1| ATP/GTP-binding site motif A (P-loop) [Brucella abortus S19]
gi|189020338|gb|ACD73060.1| ATP/GTP-binding site motif A (P-loop) [Brucella abortus S19]
Length = 325
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 9/60 (15%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A L +N + ++ +G++IGV +++ ++++ G + ++ R+ + ++
Sbjct: 208 KMALHALRAN------IFRTVLTLLGIIIGVSSVVTMLAIGTGAQNTILDRINAMGTDLI 261
>gi|82700460|ref|YP_415034.1| phosphoribulokinase ABC transporter ATPase [Brucella melitensis
biovar Abortus 2308]
gi|237816050|ref|ZP_04595046.1| Macrolide export ATP-binding/permease protein macB [Brucella
abortus str. 2308 A]
gi|254689843|ref|ZP_05153097.1| macrolide export ATP-binding/permease protein macB [Brucella
abortus bv. 6 str. 870]
gi|254697991|ref|ZP_05159819.1| macrolide export ATP-binding/permease protein macB [Brucella
abortus bv. 2 str. 86/8/59]
gi|254730877|ref|ZP_05189455.1| macrolide export ATP-binding/permease protein macB [Brucella
abortus bv. 4 str. 292]
gi|256258096|ref|ZP_05463632.1| macrolide export ATP-binding/permease protein macB [Brucella
abortus bv. 9 str. C68]
gi|260547208|ref|ZP_05822946.1| macrolide export ATP-binding/permease macB [Brucella abortus NCTC
8038]
gi|260758596|ref|ZP_05870944.1| macrolide export ATP-binding/permease macB [Brucella abortus bv. 4
str. 292]
gi|260884391|ref|ZP_05896005.1| macrolide export ATP-binding/permease macB [Brucella abortus bv. 9
str. C68]
gi|82616561|emb|CAJ11640.1| ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA
ATPase:Phosphoribulokinase [Brucella melitensis biovar
Abortus 2308]
gi|237788713|gb|EEP62925.1| Macrolide export ATP-binding/permease protein macB [Brucella
abortus str. 2308 A]
gi|260095573|gb|EEW79451.1| macrolide export ATP-binding/permease macB [Brucella abortus NCTC
8038]
gi|260668914|gb|EEX55854.1| macrolide export ATP-binding/permease macB [Brucella abortus bv. 4
str. 292]
gi|260873919|gb|EEX80988.1| macrolide export ATP-binding/permease macB [Brucella abortus bv. 9
str. C68]
Length = 381
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 9/60 (15%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A L +N + ++ +G++IGV +++ ++++ G + ++ R+ + ++
Sbjct: 264 KMALHALRAN------IFRTVLTLLGIIIGVSSVVTMLAIGTGAQNTILDRINAMGTDLI 317
>gi|87124414|ref|ZP_01080263.1| possible ABC transporter [Synechococcus sp. RS9917]
gi|86167986|gb|EAQ69244.1| possible ABC transporter [Synechococcus sp. RS9917]
Length = 409
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 33/83 (39%), Gaps = 10/83 (12%)
Query: 3 IFSRFEVI----VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMI 58
+ + + +A L +NR S ++ +G++IG ++I ++ V G +
Sbjct: 1 MARKLPLRDTVGMALNTLRANRLR------SLLTMLGIIIGNASVISLVGVGRGAQNLAE 54
Query: 59 KRVLGINGHVVIQQKYYPLVDYQ 81
++ + +V+ Q
Sbjct: 55 DQLSNLGANVLFVVPGSNDTRRQ 77
>gi|285808575|gb|ADC36096.1| protein of unknown function DUF214 [uncultured bacterium 164]
Length = 421
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 35/76 (46%), Gaps = 9/76 (11%)
Query: 1 MSIFSRFE---VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDM 57
M I + + ++ + S++ +F ++ +G+++GV+ IVV S++ G R +
Sbjct: 1 MRITTSLPYEVLKMSMESIRSHKFRSF------LTILGIVVGVITAIVVASILTGMRNSI 54
Query: 58 IKRVLGINGHVVIQQK 73
+ V + +
Sbjct: 55 VAIVEEYGTNNIYAFH 70
>gi|304385639|ref|ZP_07367983.1| ABC superfamily ATP binding cassette transporter ABC protein
[Pediococcus acidilactici DSM 20284]
gi|304328143|gb|EFL95365.1| ABC superfamily ATP binding cassette transporter ABC protein
[Pediococcus acidilactici DSM 20284]
Length = 645
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 27/241 (11%), Positives = 64/241 (26%), Gaps = 11/241 (4%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A +++ N K + G IG+ ++I+++ + NG M ++
Sbjct: 249 ALQMALKHMGYNLKRN------LLIIFGASIGIFSVILMLGLGNGVTGYMNDQISSQINP 302
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+Q + + + + V S +V+ ++
Sbjct: 303 TAVQVSKNATPEQMQDGQGITMADADYRRFQKMDHVKSVERGYYLQSAKVVKEKKSTTLQ 362
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
LQ N I L + + + + K
Sbjct: 363 VLQTWNKTERVNDIKYGHLPHANEIL--LDKASAKKLDKHYKNVVGKKVTIFVTTVDDQK 420
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF---NLENAVSGIEVFVKDPDAIEKTHENI 244
L +G ++ + F L + + + V V ++ I
Sbjct: 421 RPVQLQKEVTVSGVITSGTSAINYNTLKGMFTDQKLSFSPNFLTVNVDQVTNVKDVQNKI 480
Query: 245 V 245
Sbjct: 481 K 481
>gi|229100028|ref|ZP_04230947.1| ABC transporter, permease component [Bacillus cereus Rock3-29]
gi|228683385|gb|EEL37344.1| ABC transporter, permease component [Bacillus cereus Rock3-29]
Length = 856
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 32/257 (12%), Positives = 75/257 (29%), Gaps = 7/257 (2%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
R E ++ R + NR+ A +S+A I G M+ ++ + + S+ G +E + + +
Sbjct: 455 IFRIETSISSRNVIRNRQKAAMSVA--ILSFGFMLALVGSMYMNSMQAGMKEGIKETLPA 512
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQ-----AFVSGLSSGGSGVLV 118
V ++ + V + + S V
Sbjct: 513 DLAIRVPMSGRENEHIPFEWLEKIKNVEGVKNTAALATDTKSKLVDYDFKKSDSEWYDFV 572
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
R + + + + N G + L G+ + L +
Sbjct: 573 RKNNINPERMEVSGINSTVFNQVKKIKVVSGKSLEAPLKNGEGVISKRTADYLGIKLNDK 632
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+ + + M + +E I++ V I
Sbjct: 633 IKVQSQGHEPQLIKITSILEKHLQIGTMGVLVNEEWAKENFYIKGYESIDIMVDSHKNIN 692
Query: 239 KTHENIVRILGNGVVVI 255
+ ++I +I+ +G +
Sbjct: 693 RIEQDINKIIKSGSNIE 709
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 37/241 (15%), Positives = 74/241 (30%), Gaps = 19/241 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A + + NR S+ + + +GVM+ M L+ SV R+ +I + ++
Sbjct: 4 FKYAKKSIKENRLRT--SLIALGTALGVMLATMLLLGNNSVEETVRQQVINNY--GDYNL 59
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+++ + V + +S
Sbjct: 60 QFGYLKNDQYLNDNEVDKIKNFKNQKNVSKVLIPYVIPDREEIKNQPAYWGVEQDSPEIR 119
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
Y ++G V I K GI IGDK+ + P + K+
Sbjct: 120 SYKIVQGRY------PEKGAEVAITKSYVEKNGIKIGDKLKMPFPPFNE---------KT 164
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
TV+G+ + ++ Q +L+N + ++V + I +L
Sbjct: 165 VTVVGILNPPAMSAMKQTAFFPIKWLQDEMDLKNKYNLVQVKTANASEESFLVSEIKSVL 224
Query: 249 G 249
Sbjct: 225 D 225
>gi|260589621|ref|ZP_05855534.1| macrolide export ATP-binding/permease protein MacB [Blautia
hansenii DSM 20583]
gi|260539861|gb|EEX20430.1| macrolide export ATP-binding/permease protein MacB [Blautia
hansenii DSM 20583]
Length = 417
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 59/144 (40%), Gaps = 8/144 (5%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ ++++ +++++ +F ++ +G++IG+ +LI ++S + G E + K ++G +V
Sbjct: 5 IRLSFQGIWAHKMRSF------LTMLGIIIGIASLISIVSTIKGTNEQIKKNLIGEGDNV 58
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
V +Y+ + V + + + + VR ++S F
Sbjct: 59 VDVYLGQGGSEYEMEYQGVP--EGVPVITKEQKEKIADLDEVTNVTCYQVRKYADSVFYQ 116
Query: 129 LQNSFSRFYGNVSNDFDRGKGVII 152
+ + D+ G I
Sbjct: 117 NKTMNGGAVFGIDTDYLDTCGYQI 140
>gi|94967753|ref|YP_589801.1| ABC efflux pump, inner membrane subunit [Candidatus Koribacter
versatilis Ellin345]
gi|94549803|gb|ABF39727.1| ABC efflux pump, inner membrane subunit [Candidatus Koribacter
versatilis Ellin345]
Length = 420
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 28/51 (54%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVD 79
S ++ +G++IGVM +I++ SV+ G +++ V + +++ P
Sbjct: 25 SGLTVLGIVIGVMMVILISSVVRGLNQNVQDMVSSMGSNIIFAFHMEPFNF 75
>gi|331083054|ref|ZP_08332171.1| hypothetical protein HMPREF0992_01095 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330405056|gb|EGG84593.1| hypothetical protein HMPREF0992_01095 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 417
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 21/144 (14%), Positives = 58/144 (40%), Gaps = 8/144 (5%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ ++++ +++++ +F ++ +G++IG+ +LI ++S + G E + K ++G +V
Sbjct: 5 IRLSFQGIWAHKMRSF------LTMLGIIIGIASLISIVSTIKGTNEQIKKNLIGEGDNV 58
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
V +Y+ + V + + + + R ++S F
Sbjct: 59 VDVYLGQGGSEYEMEYQGVP--EGVPVITKEQKEKIADLDEVTNVTCYQARKYADSVFYQ 116
Query: 129 LQNSFSRFYGNVSNDFDRGKGVII 152
+ + D+ G I
Sbjct: 117 NKTMNGGAVFGIDTDYLDTCGYQI 140
>gi|308234344|ref|ZP_07665081.1| hypothetical protein AvagD15_04832 [Atopobium vaginae DSM 15829]
gi|328943325|ref|ZP_08240790.1| hypothetical protein HMPREF0091_10015 [Atopobium vaginae DSM 15829]
gi|327491294|gb|EGF23068.1| hypothetical protein HMPREF0091_10015 [Atopobium vaginae DSM 15829]
Length = 1132
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 25/68 (36%), Gaps = 10/68 (14%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
F V R LF +K F+++ G+ G AL++ V G + + +
Sbjct: 743 SFSWKVTLRNLFLYKKRLFMTVI------GIA-GCTALLL---VGFGLHDAIWDIINKQY 792
Query: 66 GHVVIQQK 73
+ Q
Sbjct: 793 VDITHYQM 800
>gi|296101399|ref|YP_003611545.1| hypothetical protein ECL_01035 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295055858|gb|ADF60596.1| hypothetical protein ECL_01035 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 436
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 45/275 (16%), Positives = 92/275 (33%), Gaps = 22/275 (8%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVM---------NGF 53
+F +V A+ LF +++ ++ +IA+ + GV I + + S N
Sbjct: 24 LFRSRDVKFAFLNLFRHKRRSYSTIAAIM-LGGVSIFLYGGFIDYSFWILKEQTIRTNIG 82
Query: 54 REDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGG 113
+ + + I N D P + + + +S S
Sbjct: 83 HVQIYNENYFQTSNKNKSLIADYASLKKAILNDPDLAPHISTLSGQLEFTGVISQYESET 142
Query: 114 SGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSP 173
S + SF + R + +G LA+ L D +++L
Sbjct: 143 SSYFSALGVEPLPALKLGSFDKLISGSDLSRVRTDEITLGSGLAKTLNAHYDDWLDVLVV 202
Query: 174 YGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKD 233
+ + ++ + F DYD+ + + L AQ N+VS + + +KD
Sbjct: 203 NTEGGQGALSMKLRGI-----FESGIKDYDDVAMKIPLDTAQRIMGT-NSVSKVLILLKD 256
Query: 234 PDAIEKTHENIVRILGN---GVVVIDWQQRYQIFF 265
D + + + ++V DW++ F
Sbjct: 257 -DDTAVFSAKLRQFIAKHHLPLLVKDWKET--SIF 288
>gi|146299220|ref|YP_001193811.1| hypothetical protein Fjoh_1460 [Flavobacterium johnsoniae UW101]
gi|146153638|gb|ABQ04492.1| protein of unknown function DUF214 [Flavobacterium johnsoniae
UW101]
Length = 415
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 30/262 (11%), Positives = 74/262 (28%), Gaps = 21/262 (8%)
Query: 1 MSIFSRF---EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDM 57
M ++ R + A L +N+ + +S +GV IG+ ++I V++ ++ + +
Sbjct: 1 MLLYLRLLKESLSFAINALRNNKLR------TLLSLLGVTIGIFSIIAVLAAVDSLDKKI 54
Query: 58 IKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVL 117
+ L I + + + + P+V + + G +
Sbjct: 55 -SKDLSSLDKNTIYLMKFSFGPSEIPQWKREQFPNVKYDEYVNLKNSLNNTDQVGYQLWV 113
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
+ D + + D D + +
Sbjct: 114 NKETLKYDSKTVADVRINPSSFEMGDIDGLSFEKGRFYNESESNSGTAVIVLGYEIAQGL 173
Query: 178 TPMGMGIRSKSYTVLGMFRM----------RFPDYDNGMVYMSLQEAQLYFNLENAVS-G 226
I F + F D ++ VY+ + + +A++
Sbjct: 174 FGDIDPIGKNIRLYGQRFTVIGVIAKQGAGFFGDSNDTSVYLPANFLRRMYGDSDAMTPM 233
Query: 227 IEVFVKDPDAIEKTHENIVRIL 248
I + +E + + L
Sbjct: 234 IILKPTKGVDMEAYKAEVSQKL 255
>gi|315657458|ref|ZP_07910340.1| exopolyphosphatase [Mobiluncus curtisii subsp. holmesii ATCC 35242]
gi|315491930|gb|EFU81539.1| exopolyphosphatase [Mobiluncus curtisii subsp. holmesii ATCC 35242]
Length = 857
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
F+R A R L + S+ + IG+ I I+ S + +++
Sbjct: 472 FNRLPAQFALRNLRRYPRRT--SLGAAALVIGIAIATTGGILADSARQSLQSGVVQ 525
>gi|315654631|ref|ZP_07907537.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333]
gi|315491095|gb|EFU80714.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333]
Length = 857
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
F+R A R L + S+ + IG+ I I+ S + +++
Sbjct: 472 FNRLPAQFALRNLRRYPRRT--SLGAAALVIGIAIATTGGILADSARQSLQSGVVQ 525
>gi|304390195|ref|ZP_07372149.1| exopolyphosphatase [Mobiluncus curtisii subsp. curtisii ATCC 35241]
gi|304326677|gb|EFL93921.1| exopolyphosphatase [Mobiluncus curtisii subsp. curtisii ATCC 35241]
Length = 857
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
F+R A R L + S+ + IG+ I I+ S + +++
Sbjct: 472 FNRLPAQFALRNLRRYPRRT--SLGAAALVIGIAIATTGGILADSARQSLQSGVVQ 525
>gi|298346046|ref|YP_003718733.1| ABC transporter membrane protein [Mobiluncus curtisii ATCC 43063]
gi|298236107|gb|ADI67239.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Mobiluncus curtisii ATCC 43063]
Length = 857
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 2/56 (3%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
F+R A R L + S+ + IG+ I I+ S + +++
Sbjct: 472 FNRLPAQFALRNLRRYPRRT--SLGAAALVIGIAIATTGGILADSARQSLQSGVVQ 525
>gi|224984468|ref|YP_002641956.1| efflux ABC transporter, permease protein [Borrelia spielmanii A14S]
gi|224497547|gb|ACN53171.1| efflux ABC transporter, permease protein [Borrelia spielmanii A14S]
Length = 363
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+G G+ + + G+ R D+ + S+ + +F+ ++ I+V++K+ +
Sbjct: 130 MLGEGLILQDIRLTGIVRFPVIQKDSMVAITSINTLKSFFDFKDGAHIIQVYLKNNSFLN 189
Query: 239 KTHENIV---RILGNGVVVIDWQQRYQIF 264
+ + DW + F
Sbjct: 190 SFKKKLEFLKNKSNIDFEYSDWYEINPSF 218
>gi|145219367|ref|YP_001130076.1| ABC transporter related [Prosthecochloris vibrioformis DSM 265]
gi|145205531|gb|ABP36574.1| ABC transporter related protein [Chlorobium phaeovibrioides DSM
265]
Length = 661
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
A++ +F+N+ +F +S +G+++GV ++I +M++ G + M + + + +
Sbjct: 268 AFQAIFANKVRSF------LSVLGILVGVASVIALMALGEGAKSAMQEELKSMGSN 317
>gi|149176369|ref|ZP_01854983.1| hypothetical protein PM8797T_07599 [Planctomyces maris DSM 8797]
gi|148844721|gb|EDL59070.1| hypothetical protein PM8797T_07599 [Planctomyces maris DSM 8797]
Length = 452
Score = 38.2 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 7/53 (13%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+ +AW+ + R +AS ++ + V +GV +I V+ V+NG + M +
Sbjct: 4 LTIAWKSIRQRR------VASLLTALSVALGVTLMISVL-VINGVIDRMFNQT 49
>gi|307704592|ref|ZP_07641497.1| permease family protein [Streptococcus mitis SK597]
gi|307621889|gb|EFO00921.1| permease family protein [Streptococcus mitis SK597]
Length = 419
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 26/249 (10%), Positives = 77/249 (30%), Gaps = 11/249 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ A+ + +++ S ++ IG++IGV +++V+M++ + + K + ++
Sbjct: 4 LKFAFSSIMAHKMR------SLLTMIGIIIGVSSVVVIMALGDSMSRQLNKNMTRSQKNI 57
Query: 69 VIQQKYYP----LVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + A + + + V P +++V + +++
Sbjct: 58 SVFFSSKKSKDGSFTQKQSAFTVSGKEEEVHVEPPKPQESWVKEAAKLKGVDNYYVTNST 117
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ N++ + + LA K D
Sbjct: 118 NAILTYKDKKVENANLTGGNRTYMEAVNNEILAGRSLREQDFKEFASVILLDEELSISLF 177
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQE-AQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
S + + + Y VY S + + L + + +++
Sbjct: 178 GSPQEAINKVVEVNGFSYRVIGVYTSPESKNSKMYGLGGLPITTNISLAANFNVDEIANI 237
Query: 244 IVRILGNGV 252
+ R+ +
Sbjct: 238 VFRVNDTSL 246
>gi|326201726|ref|ZP_08191597.1| protein of unknown function DUF214 [Clostridium papyrosolvens DSM
2782]
gi|325988326|gb|EGD49151.1| protein of unknown function DUF214 [Clostridium papyrosolvens DSM
2782]
Length = 392
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 37/249 (14%), Positives = 78/249 (31%), Gaps = 20/249 (8%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M F + +A + + N+ AF ++ +GV+IGV ++I ++ G + +
Sbjct: 1 MGFFQAY--KMALKSISGNKVRAF------LTMLGVIIGVGSVITAVAFAQGSTKSITDS 52
Query: 61 VLGINGHVVIQQ----KYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
+ G+ +++ + Y + D I ++ V + +
Sbjct: 53 IEGLGSNLISINITGRNSNRNITYDELKTFADENSKDISMIAPVVNGSMTLKAGTKSRNT 112
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
V G S +S D D + +G ++ + +
Sbjct: 113 TVVGTSEEYEYIRSRHVQSGRFILSFDNDYKLKTAV-------IGTAVANDLFTGQNPVG 165
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
T G K VL + V + + AQ + +S V D +
Sbjct: 166 QTLKINGQVFKVVGVLQQIDGGHDSSSDDQVIIPVTVAQRL-SKNGRISNFTVQAADAVS 224
Query: 237 IEKTHENIV 245
+E +
Sbjct: 225 VETAMAKLN 233
>gi|225851018|ref|YP_002731252.1| ABC-type transport system, permease component [Persephonella marina
EX-H1]
gi|225645639|gb|ACO03825.1| ABC-type transport system, permease component [Persephonella marina
EX-H1]
Length = 400
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 20/224 (8%), Positives = 62/224 (27%), Gaps = 4/224 (1%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNG-FRE--DMIKRVLGINGHVVIQQKYYPLVDYQFIAN 85
+F S IG+ G+ +L ++++ + G F+ ++++ + + + + +
Sbjct: 22 TFFSVIGIAFGIASLSIIVAAVEGAFKRAYEVVESFGPDSVLIFGGSQEQKGIRSRQKTL 81
Query: 86 RLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFD 145
+ I D+ + P + + + + + + + +
Sbjct: 82 TIYDIKDLKRAFPEIKIIMPIVRVRTKVYYRGNVEETRLYGVDTNFEEAWSWYLLEGRMF 141
Query: 146 RGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNG 205
+ + ++L P G + + +
Sbjct: 142 TDQELKRKENLCIIGKYIKETLFKNEDPLGKSIILNRLPCRVIGVLSERGTTPTGRNLDN 201
Query: 206 MVYMSLQEAQ-LYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
V M + +S I + + + R L
Sbjct: 202 RVLMPYTTVMYKINHDPVYISSIRIRYYPGVDLSSVIKETERFL 245
>gi|307595883|ref|YP_003902200.1| hypothetical protein Vdis_1775 [Vulcanisaeta distributa DSM 14429]
gi|307551084|gb|ADN51149.1| protein of unknown function DUF214 [Vulcanisaeta distributa DSM
14429]
Length = 414
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 26/250 (10%), Positives = 71/250 (28%), Gaps = 19/250 (7%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ R ++ R L + + ++ + ++ V +I + ++ GF+ + V
Sbjct: 29 MSLRTLFTMSIRNLSGRKTR------AILTMLAIIYSVALMITLETMTYGFKVAITNEVE 82
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
I + + + +A + +P V V+P + + +
Sbjct: 83 NILPTDL-MVYSQSVSIPEAVAQVIAKLPHVSYVVPAIIISTAQVNGHAVTLIGIPNQYF 141
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ +++ I +D + +
Sbjct: 142 SYFEVRMESGSLPMSDG----------EAIIQDTLAQRDNISIGDTIYVQVLTGIQGGSE 191
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFV--KDPDAIEKT 240
I K F + M+ + Q + E V+ I + + ++P + +
Sbjct: 192 IIPLKVTGTFSSILGGFLGFQLNMIVTPISTLQNDLDDEGFVNAIFIKLSQENPTYLNQL 251
Query: 241 HENIVRILGN 250
+ N
Sbjct: 252 ATALSEYFPN 261
>gi|262382561|ref|ZP_06075698.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|262295439|gb|EEY83370.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 419
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 32/239 (13%), Positives = 67/239 (28%), Gaps = 14/239 (5%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ GV G++ L++++ NG + M + G + Y+
Sbjct: 21 SLLTCFGVFWGILMLVILLGAGNGMKNAMFSNINGFATNSAFFFSDRTSESYKGFNKGRQ 80
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
+ V + + R N F L +++ +
Sbjct: 81 WDMRNRDVESI--RKQVKDIEAVSPIIWGNRSDKNIVFGQLSGTYNVKGVQPDYFKIETQ 138
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFR------------ 196
+ G+ L I I + +V G K V G++
Sbjct: 139 QLYYGRLLNEIDEIEKRKVCLIGAKVNEVLFKGSDPCGKYIRVNGIYYQVVGVTKQRASS 198
Query: 197 MRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVI 255
+ V++ Q N + + + V K I+ I I+ + +
Sbjct: 199 VNIGGRAEESVFLPFSTMQQTLNQGDIIHFLCVSAKPGYKIDPVITQIKDIVKSQNQIS 257
>gi|325168774|ref|YP_004280564.1| macrolide-specific ABC-type efflux carrier [Agrobacterium sp.
H13-3]
gi|325064497|gb|ADY68186.1| macrolide-specific ABC-type efflux carrier [Agrobacterium sp.
H13-3]
Length = 649
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A R + + R F ++ +G++IG+ A++ V+ + G RE ++ ++ + +
Sbjct: 261 MALRSMAAYRIRTF------LTMLGIIIGIAAVVCVVGLGEGSREKVLAQMSELGASTLS 314
Query: 71 QQKYYPL 77
Sbjct: 315 IYPGRDW 321
>gi|311029186|ref|ZP_07707276.1| hypothetical protein Bm3-1_01281 [Bacillus sp. m3-13]
Length = 860
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 35/72 (48%), Gaps = 10/72 (13%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M+I ++ + R+L N++ ++I GV+I V ++ V ++ F + + ++
Sbjct: 1 MNIINKLTL----RHLKKNKRRTMVTII------GVIISVAMVMAVATLGVSFLDLLKRQ 50
Query: 61 VLGINGHVVIQQ 72
+ NG +Q
Sbjct: 51 TIADNGEWHVQY 62
>gi|301308200|ref|ZP_07214154.1| putative ABC transporter, permease protein [Bacteroides sp. 20_3]
gi|300833670|gb|EFK64286.1| putative ABC transporter, permease protein [Bacteroides sp. 20_3]
Length = 419
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 32/239 (13%), Positives = 67/239 (28%), Gaps = 14/239 (5%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ GV G++ L++++ NG + M + G + Y+
Sbjct: 21 SLLTCFGVFWGILMLVILLGAGNGMKNAMFSNINGFATNSAFFFSDRTSESYKGFNKGRQ 80
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
+ V + + R N F L +++ +
Sbjct: 81 WDMRNRDVESI--RKQVKDIEAVSPIIWGNRSDKNIVFGQLSGTYNVKGVQPDYFKIETQ 138
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFR------------ 196
+ G+ L I I + +V G K V G++
Sbjct: 139 QLYYGRLLNEIDEIEKRKVCLIGAKVNEVLFKGNDPCGKYIRVNGIYYQVVGVTKQRASS 198
Query: 197 MRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVI 255
+ V++ Q N + + + V K I+ I I+ + +
Sbjct: 199 VNIGGRAEESVFLPFSTMQQTLNQGDIIHFLCVSAKPGYKIDPVITQIKDIVKSQNQIS 257
>gi|218246790|ref|YP_002372161.1| hypothetical protein PCC8801_1967 [Cyanothece sp. PCC 8801]
gi|257059832|ref|YP_003137720.1| hypothetical protein Cyan8802_1994 [Cyanothece sp. PCC 8802]
gi|218167268|gb|ACK66005.1| protein of unknown function DUF214 [Cyanothece sp. PCC 8801]
gi|256589998|gb|ACV00885.1| protein of unknown function DUF214 [Cyanothece sp. PCC 8802]
Length = 405
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 28/269 (10%), Positives = 80/269 (29%), Gaps = 22/269 (8%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+A L +N+ + ++ +G++IG ++I + + G ++ +++ + +
Sbjct: 6 SFKMATAMLAANKLR------TSLTMLGIVIGNASVIATIGIGQGTQKLANQQLETLGPN 59
Query: 68 VVIQQKYYPLV-------DYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
++ + I + + V+ + L S G+
Sbjct: 60 ILFVMPGNQQGRRTTLNLPKTLVLEDAKAIASQVPSIKQVAPEINQRQLISYGNQKTNAT 119
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+S + + + + K + + ++ + + + + +
Sbjct: 120 LSGTTPEFSSVRNFQIATGRFINEIDLKRNKRVAVIGSEVSNTLFKRRSAIGEQIRIKNI 179
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGM-VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
G + F + M+ Q +S I + KD D++
Sbjct: 180 GFQVIGVLEPKGSFFGTNQDETVLIPLTTMAYQIVGRTSPYGVQLSVIHIEAKDTDSVRA 239
Query: 240 THENIVRIL--------GNGVVVIDWQQR 260
I +L + V +Q
Sbjct: 240 AKFQIENLLRLRHNITNEDDFGVQTSKQM 268
>gi|170769243|ref|ZP_02903696.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia albertii TW07627]
gi|170121895|gb|EDS90826.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia albertii TW07627]
Length = 648
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQRQPWVASATPAVSQNLRLRYSNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNSRRQLFPHKANVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRIMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|270290103|ref|ZP_06196329.1| drug ABC exporter, ATP-binding and membrane-spanning/permease
subunits [Pediococcus acidilactici 7_4]
gi|270281640|gb|EFA27472.1| drug ABC exporter, ATP-binding and membrane-spanning/permease
subunits [Pediococcus acidilactici 7_4]
Length = 482
Score = 38.2 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 27/241 (11%), Positives = 64/241 (26%), Gaps = 11/241 (4%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A +++ N K + G IG+ ++I+++ + NG M ++
Sbjct: 86 ALQMALKHMGYNLKRN------LLIIFGASIGIFSVILMLGLGNGVTGYMNDQISSQINP 139
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+Q + + + + V S +V+ ++
Sbjct: 140 TAVQVSKNATPEQMQDGQGITMADADYRRFQKMDHVKSVERGYYLQSAKVVKEKKSTTLQ 199
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
LQ N I L + + + + K
Sbjct: 200 VLQTWNKTERVNDIKYGHLPHANEIL--LDKASAKKLDKHYKNVVGKKVTIFVTTVDDQK 257
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF---NLENAVSGIEVFVKDPDAIEKTHENI 244
L +G ++ + F L + + + V V ++ I
Sbjct: 258 RPVQLQKEVTVSGVITSGTSAINYNTLKGMFTDQKLSFSPNFLTVNVDQVTNVKDVQNKI 317
Query: 245 V 245
Sbjct: 318 K 318
>gi|303245046|ref|ZP_07331367.1| protein of unknown function DUF214 [Methanothermococcus okinawensis
IH1]
gi|302484609|gb|EFL47552.1| protein of unknown function DUF214 [Methanothermococcus okinawensis
IH1]
Length = 353
Score = 38.2 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 26/221 (11%), Positives = 67/221 (30%), Gaps = 23/221 (10%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S ++ +G++IGVMA I + ++ G + I + + V+ F +D
Sbjct: 3 SILALLGIIIGVMA-ISSLGILGGGLKQGISKNFEGVANFVVVFPNAGEGYLHFTKRDVD 61
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
+ + + + + +
Sbjct: 62 KLKRLNCKVIPI-----------------CTRSDIVYIKGKNKKTYTSIYGIGKGDIKYL 104
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVY 208
+ I +L+ N+ + D + + + G++ + +
Sbjct: 105 NLGINNELSDTTVYVDSVFSNLNNVNKDSMITINNVSFR---IRGIYNSSYFIISQNSII 161
Query: 209 MSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
+S + + ++ N S + ++VK+ D I I+
Sbjct: 162 LSQKTYKRFYG--NNYSMVVLYVKNKDDINDIKNKTESIMN 200
>gi|167754431|ref|ZP_02426558.1| hypothetical protein ALIPUT_02725 [Alistipes putredinis DSM 17216]
gi|167659056|gb|EDS03186.1| hypothetical protein ALIPUT_02725 [Alistipes putredinis DSM 17216]
Length = 419
Score = 38.2 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 37/237 (15%), Positives = 68/237 (28%), Gaps = 15/237 (6%)
Query: 13 WRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQ 72
W + N+ F++ S V G+ L++++ NG + + + + VI
Sbjct: 9 WASIRRNKLRTFLTGFS------VAWGIFMLVILLGSGNGLKNGTLSNFGSMAVNSVIIN 62
Query: 73 KYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNS 132
+ Y+ + + F + S N+
Sbjct: 63 GGWTSQPYKGYDKWRRINITNRDLE--ILRTEFPEVDKVSARVQGPGQYNLSHGRDFLNN 120
Query: 133 FSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVL 192
+ + V+ G+ L I + DV G + V
Sbjct: 121 AAVVGSDPEYREIMNVRVLDGRFLNDTDLRERRKVIVVDKNVRDVLFHGQSPVGQHLLVN 180
Query: 193 GMFRM------RFPDYDNGMVYMSLQEAQLYFNLEN-AVSGIEVFVKDPDAIEKTHE 242
G ++ L AQL FN + +V + VKD D +K E
Sbjct: 181 GTSYSIIGVFEMDQFGSYTFTFIPLTTAQLLFNHSDPSVGQTYLSVKDIDTDQKMAE 237
>gi|317131064|ref|YP_004090378.1| protein of unknown function DUF214 [Ethanoligenens harbinense
YUAN-3]
gi|315469043|gb|ADU25647.1| protein of unknown function DUF214 [Ethanoligenens harbinense
YUAN-3]
Length = 388
Score = 38.2 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 35/67 (52%), Gaps = 14/67 (20%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + AW +FSN+ +F ++ +G++IGV+A+ +++S+ G + +
Sbjct: 7 MRM--------AWLSVFSNKMRSF------LTMLGIIIGVLAVTMLVSIGQGATAQITGQ 52
Query: 61 VLGINGH 67
+ G+ +
Sbjct: 53 IQGLGAN 59
>gi|254388455|ref|ZP_05003690.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
gi|294814202|ref|ZP_06772845.1| ABC-type antimicrobial peptide transport system, permease component
[Streptomyces clavuligerus ATCC 27064]
gi|326442597|ref|ZP_08217331.1| ABC transporter-like protein [Streptomyces clavuligerus ATCC 27064]
gi|197702177|gb|EDY47989.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
gi|294326801|gb|EFG08444.1| ABC-type antimicrobial peptide transport system, permease component
[Streptomyces clavuligerus ATCC 27064]
Length = 403
Score = 38.2 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 34/238 (14%), Positives = 67/238 (28%), Gaps = 14/238 (5%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR--VLGINGHVVIQQK 73
L + F +S +G+ IGV A+I V+ + + R ++ + LG N V +
Sbjct: 28 LRTRPLRVF------LSALGIAIGVAAMIAVVGISSSSRAEVDRLLDGLGTNMLRVAPGE 81
Query: 74 YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSF 133
+ + I V V S A + S+ + +
Sbjct: 82 AASGGSAELPRETVPMIRRVGPVQQVTSIGAVEGAAVYRNQHIPTGRTSSVEVAAAGPRL 141
Query: 134 SRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLG 193
G R + A LG +++ P + V
Sbjct: 142 LPAIGGEVR-IGRWLESATEQYPAVVLGAQAARRLDADEPGTRLW----LGDRWFSLVGV 196
Query: 194 MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNG 251
+ + + + A+ Y + S + V +D D + +
Sbjct: 197 LRPVPLAPEIDNTALVGWDAARTYLGFDGHPSTVYVRARD-DRVTAVWNVLAATANPE 253
>gi|16800256|ref|NP_470524.1| hypothetical protein lin1187 [Listeria innocua Clip11262]
gi|16413646|emb|CAC96418.1| lin1187 [Listeria innocua Clip11262]
Length = 1136
Score = 38.2 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 33/257 (12%), Positives = 70/257 (27%), Gaps = 21/257 (8%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F V R LF ++ ++ +GV G ALI+ GF L
Sbjct: 756 MNFTSKVTARNLFRYKQRM------LMTVLGVA-GCTALILT-----GF-------GLRN 796
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + + +Y ++ Y + P K + S + + +
Sbjct: 797 SISDIAKMQYGQIMKYDAAVYQDMSAPPTAKETYDNLMEDSNIKSKLAMSQTNIDAVKSG 856
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + N D+ + +I +
Sbjct: 857 QSAQASSIIVPKNLNELPDYIVLRDRASHTTEKLTDDGAIISEKLAKLFDIKPGDSITVK 916
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+K+ +Y +YM+ Q F+ + + + + +KD EK
Sbjct: 917 NAKNDKYKIKVSAITENYAMHYIYMTPTYYQQIFDEKPSYNLDLLKLKDTS--EKVETEF 974
Query: 245 VRILGNGVVVIDWQQRY 261
L + ++
Sbjct: 975 AEKLTDSKSILTITFSN 991
>gi|311746441|ref|ZP_07720226.1| putative ABC transporter, permease protein [Algoriphagus sp. PR1]
gi|126575334|gb|EAZ79666.1| putative ABC transporter, permease protein [Algoriphagus sp. PR1]
Length = 802
Score = 37.8 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 24/249 (9%), Positives = 67/249 (26%), Gaps = 11/249 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMN---GFREDMIK 59
+ + + +A+R + N+ +F++ G+ IG+ I++M +N GF + +
Sbjct: 1 MLKNY-LKIAFRNIRKNKLFSFLN------IAGLSIGMAVCIMIMLFVNYEQGF-DSIHT 52
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
+ + V + + + G
Sbjct: 53 KNIYRLDEVQNWEGMVAPQKVALSMYPMGPTLLEEFPEILNFTRVRPGGELRFKDQEKEA 112
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
++ + ++ + V + L I + + L ++
Sbjct: 113 MLTETMWADSSFFQIFDFKLVEGNRATALTEPYSIVLTEKSAEKIFGETSPLGKSLTLSE 172
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+ + + + ++ + S Q N + + D +E
Sbjct: 173 QDTISYTITAVLEDIPENSHLRFEALTSFSSYVGPQAMDNWGGNWLTTYLELGDEANLEA 232
Query: 240 THENIVRIL 248
L
Sbjct: 233 MESKFPAFL 241
>gi|134300806|ref|YP_001114302.1| hypothetical protein Dred_2974 [Desulfotomaculum reducens MI-1]
gi|134053506|gb|ABO51477.1| protein of unknown function DUF214 [Desulfotomaculum reducens
MI-1]
Length = 411
Score = 37.8 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 25/41 (60%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
SF+ +G+MI V +++ ++S++NGF +I ++ G
Sbjct: 20 SFLCILGIMISVASMVSLLSLINGFNNSLINQIQQELGTQQ 60
>gi|86141788|ref|ZP_01060312.1| putative transporter permease protein [Leeuwenhoekiella
blandensis MED217]
gi|85831351|gb|EAQ49807.1| putative transporter permease protein [Leeuwenhoekiella
blandensis MED217]
Length = 808
Score = 37.8 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGF 53
+F + + +AWR L N + I+I + + V +++ S + F
Sbjct: 1 MFRNY-IKIAWRNLLKNSTYSLINIIGLTIGLAACLAVTTVVIDESSYDSF 50
>gi|300823617|ref|ZP_07103744.1| ABC transporter, ATP-binding protein [Escherichia coli MS 119-7]
gi|331676667|ref|ZP_08377363.1| macrolide export ATP-binding/permease protein MacB [Escherichia
coli H591]
gi|300523817|gb|EFK44886.1| ABC transporter, ATP-binding protein [Escherichia coli MS 119-7]
gi|331075356|gb|EGI46654.1| macrolide export ATP-binding/permease protein MacB [Escherichia
coli H591]
Length = 648
Score = 37.8 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 28/270 (10%), Positives = 87/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSFGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|300173730|ref|YP_003772896.1| ABC transporter ATP-binding/permease [Leuconostoc gasicomitatum LMG
18811]
gi|299888109|emb|CBL92077.1| ABC transporter, ATP-binding/permease protein [Leuconostoc
gasicomitatum LMG 18811]
Length = 660
Score = 37.8 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 31/265 (11%), Positives = 68/265 (25%), Gaps = 26/265 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A+ +L + F + +G IGV ++I+ + + NG + + +V +
Sbjct: 250 WDMAFDHLKYKKLQNF------LIILGSAIGVFSVIIFLGLGNGIKGYITNQVDALVNPN 303
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSG----------------LSSG 112
D A + + S +
Sbjct: 304 YQSVVRNTTKDKDASAAERMQATAQARATNYSSTTMNKAMLNRLDNVQGVDAVYAGGQFS 363
Query: 113 GSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILS 172
+ + + S + G ++ S + +
Sbjct: 364 NAVFTYGNVKSQPVQIQSWSPQFSKKTIKAGHQAKSGEVLIDQAYAKKIQSNYQALIGKT 423
Query: 173 PYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMS-LQEAQLYFNLENAVSG---IE 228
R +G +++ Q NAV+
Sbjct: 424 ISFSYMAFDSSNRPVVIATSAKIAGMTDGGQSGAMFIQNWSTMQNDLKKNNAVTEANYAA 483
Query: 229 VFVKDPDAIEKTHENIVRILGNGVV 253
V +KD A+ T + I ++ NG+
Sbjct: 484 VEIKDTKAVSATMKRINKLQSNGMQ 508
>gi|94969853|ref|YP_591901.1| cell division protein FtsX [Candidatus Koribacter versatilis
Ellin345]
gi|94551903|gb|ABF41827.1| cell division protein FtsX [Candidatus Koribacter versatilis
Ellin345]
Length = 453
Score = 37.8 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+A R L + ++ IG+ +GV +L+ ++S+ G ++ +R
Sbjct: 9 LAARNLRESVLRN------SLTTIGISVGVASLVAMLSLGVGLQKLASRR 52
>gi|315296722|gb|EFU56014.1| ABC transporter, ATP-binding protein [Escherichia coli MS 16-3]
Length = 642
Score = 37.8 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 30/270 (11%), Positives = 89/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I +L + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAILKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|257456592|ref|ZP_05621787.1| putative ABC transporter, permease protein [Treponema vincentii
ATCC 35580]
gi|257446012|gb|EEV21060.1| putative ABC transporter, permease protein [Treponema vincentii
ATCC 35580]
Length = 444
Score = 37.8 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 28/267 (10%), Positives = 76/267 (28%), Gaps = 20/267 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVM--SVMNGFREDM-IKRVLGIN 65
+ +A+R L ++ + + + + I LIV + + G R+ + + I
Sbjct: 4 LKIAFRNLNRQKRRSML--------LVIAIVFAFLIVTLIDGLSAGARKSLEYQIAKIIG 55
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
GHV + + P+ ++++ + + + L + + +
Sbjct: 56 GHVYVTGAEKAADKTEDDKANEYLPPESVELVHRIIKEEKIDALYTTMRAERYGTLIFAG 115
Query: 126 FSYLQNSFSRFYGNVSNDFDR-------GKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
+ + + V I L + + + T
Sbjct: 116 NQLTAKIAGCKFDEEEALRNSFAFKEGGWENVNIENALFIPQKTAEALNVALNDVILYET 175
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAI 237
G + + + +D Y + + V+ +F+KD +
Sbjct: 176 TTLSGQATVAEFQIAGIYQDQSQFDQIQFYANFDYLNKIAEIPEGCVALFGIFLKDENQQ 235
Query: 238 EKTHENIVRILGNGVVVIDWQQRYQIF 264
+ + L + ++ F
Sbjct: 236 DAVASIFEKRLAEYGPITS-RELAAQF 261
>gi|167636519|ref|ZP_02394815.1| ABC transporter, permease protein [Bacillus anthracis str. A0442]
gi|167641798|ref|ZP_02400039.1| ABC transporter, permease protein [Bacillus anthracis str. A0193]
gi|170689410|ref|ZP_02880602.1| ABC transporter, permease protein [Bacillus anthracis str. A0465]
gi|170708962|ref|ZP_02899394.1| ABC transporter, permease protein [Bacillus anthracis str. A0389]
gi|177654090|ref|ZP_02936100.1| ABC transporter, permease protein [Bacillus anthracis str. A0174]
gi|229602464|ref|YP_002869469.1| ABC transporter, permease protein [Bacillus anthracis str. A0248]
gi|270000523|ref|NP_847655.2| ABC transporter, permease protein [Bacillus anthracis str. Ames]
gi|167510210|gb|EDR85615.1| ABC transporter, permease protein [Bacillus anthracis str. A0193]
gi|167528051|gb|EDR90851.1| ABC transporter, permease protein [Bacillus anthracis str. A0442]
gi|170126127|gb|EDS95022.1| ABC transporter, permease protein [Bacillus anthracis str. A0389]
gi|170666637|gb|EDT17408.1| ABC transporter, permease protein [Bacillus anthracis str. A0465]
gi|172080973|gb|EDT66052.1| ABC transporter, permease protein [Bacillus anthracis str. A0174]
gi|229266872|gb|ACQ48509.1| ABC transporter, permease protein [Bacillus anthracis str. A0248]
gi|269850290|gb|AAP29141.2| ABC transporter, permease protein [Bacillus anthracis str. Ames]
Length = 402
Score = 37.8 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 24/246 (9%), Positives = 76/246 (30%), Gaps = 10/246 (4%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A + +++ S ++ +G++IGV ++I V+++ G + + +G
Sbjct: 9 SIKIALSSILAHKLR------SALTMLGIIIGVGSIITVVAIGQGGEAALKSQFVGAGNQ 62
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
V + D + + +++ S + +
Sbjct: 63 TVPIHYSADINDPFGMGMVEAPKITEEDIFEIKKIPEISHVVTTNSSMEPLDIEDKKEMV 122
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVI---IGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ S ++ +G+ + + + + ++ + M
Sbjct: 123 SITGLDSEYFAVNKVKLLKGRSLQESDVDQGNNVVMISKQMEEKVFKDANPVGKIIEMKG 182
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + F + + + ++ + I V K+ D +EK +
Sbjct: 183 QPMQIIGVYKSDNEFMGMGPSEALVPISLWPTLYG-KDEIQNISVQAKNVDNLEKAGKKA 241
Query: 245 VRILGN 250
+L +
Sbjct: 242 ADVLNS 247
>gi|47530813|ref|YP_022162.1| ABC transporter permease [Bacillus anthracis str. 'Ames Ancestor']
gi|49188090|ref|YP_031343.1| ABC transporter permease [Bacillus anthracis str. Sterne]
gi|65317224|ref|ZP_00390183.1| COG0577: ABC-type antimicrobial peptide transport system, permease
component [Bacillus anthracis str. A2012]
gi|165870067|ref|ZP_02214724.1| ABC transporter, permease protein [Bacillus anthracis str. A0488]
gi|190567696|ref|ZP_03020608.1| ABC transporter, permease protein [Bacillus anthracis
Tsiankovskii-I]
gi|227818015|ref|YP_002818024.1| ABC transporter, permease protein [Bacillus anthracis str. CDC 684]
gi|254686324|ref|ZP_05150183.1| ABC transporter, permease protein [Bacillus anthracis str.
CNEVA-9066]
gi|254724320|ref|ZP_05186104.1| ABC transporter, permease protein [Bacillus anthracis str. A1055]
gi|254735181|ref|ZP_05192890.1| ABC transporter, permease protein [Bacillus anthracis str. Western
North America USA6153]
gi|254744387|ref|ZP_05202067.1| ABC transporter, permease protein [Bacillus anthracis str. Kruger
B]
gi|254755689|ref|ZP_05207722.1| ABC transporter, permease protein [Bacillus anthracis str. Vollum]
gi|254759580|ref|ZP_05211605.1| ABC transporter, permease protein [Bacillus anthracis str.
Australia 94]
gi|47505961|gb|AAT34637.1| ABC transporter, permease protein [Bacillus anthracis str. 'Ames
Ancestor']
gi|49182017|gb|AAT57393.1| ABC transporter, permease protein [Bacillus anthracis str. Sterne]
gi|164714390|gb|EDR19910.1| ABC transporter, permease protein [Bacillus anthracis str. A0488]
gi|190561112|gb|EDV15085.1| ABC transporter, permease protein [Bacillus anthracis
Tsiankovskii-I]
gi|227006587|gb|ACP16330.1| ABC transporter, permease protein [Bacillus anthracis str. CDC 684]
Length = 399
Score = 37.8 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 24/246 (9%), Positives = 76/246 (30%), Gaps = 10/246 (4%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A + +++ S ++ +G++IGV ++I V+++ G + + +G
Sbjct: 6 SIKIALSSILAHKLR------SALTMLGIIIGVGSIITVVAIGQGGEAALKSQFVGAGNQ 59
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
V + D + + +++ S + +
Sbjct: 60 TVPIHYSADINDPFGMGMVEAPKITEEDIFEIKKIPEISHVVTTNSSMEPLDIEDKKEMV 119
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVI---IGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ S ++ +G+ + + + + ++ + M
Sbjct: 120 SITGLDSEYFAVNKVKLLKGRSLQESDVDQGNNVVMISKQMEEKVFKDANPVGKIIEMKG 179
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + F + + + ++ + I V K+ D +EK +
Sbjct: 180 QPMQIIGVYKSDNEFMGMGPSEALVPISLWPTLYG-KDEIQNISVQAKNVDNLEKAGKKA 238
Query: 245 VRILGN 250
+L +
Sbjct: 239 ADVLNS 244
>gi|331002046|ref|ZP_08325566.1| hypothetical protein HMPREF0491_00428 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330411842|gb|EGG91247.1| hypothetical protein HMPREF0491_00428 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 452
Score = 37.8 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 9/65 (13%), Positives = 28/65 (43%), Gaps = 8/65 (12%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + ++ ++ L + + ++ +GV+IG +++ ++S+ G E +
Sbjct: 1 MKLLDLLKLSIS--NLKRRKLR------TVLTVLGVLIGTASVVTMLSLGIGLDELNRES 52
Query: 61 VLGIN 65
+
Sbjct: 53 MAKYG 57
>gi|331656951|ref|ZP_08357913.1| macrolide export ATP-binding/permease protein MacB 1 [Escherichia
coli TA206]
gi|331055199|gb|EGI27208.1| macrolide export ATP-binding/permease protein MacB 1 [Escherichia
coli TA206]
Length = 648
Score = 37.8 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 30/270 (11%), Positives = 89/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I +L + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAILKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|27378818|ref|NP_770347.1| ATP-binding protein [Bradyrhizobium japonicum USDA 110]
gi|81841763|sp|Q89NX6|MACB_BRAJA RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|27351967|dbj|BAC48972.1| bll3707 [Bradyrhizobium japonicum USDA 110]
Length = 653
Score = 37.8 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 32/254 (12%), Positives = 87/254 (34%), Gaps = 9/254 (3%)
Query: 11 VAWRYLFSNRKNAFISIA-----SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
+A+R+ + A +S+A SF++ +G++IG+ A+ V+++ N + ++ + +
Sbjct: 254 LAFRF-RETLRMALLSMAAHRLRSFLTMLGIIIGIAAVSSVVALGNASQNKVLSDISNLG 312
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+ + D + + + D + +S+ + SN
Sbjct: 313 TNTIEVFPGKDFGDARAGKIKTLVLDDARALDRQTFIAGVTPTVSTSTTVRYRDRESNVL 372
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ + S+ + G V + + + + + +
Sbjct: 373 VNGVDRSYFQVKGTKIAAGALFDAVAVRNIERQAVIDDNTRRTFFSDDQNAGIGRVIWVG 432
Query: 186 SKSYTVLGMFRMRFPDYDNGM---VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
V+G+ + + + VY+ Q F + ++ + + V D + + E
Sbjct: 433 KVPCRVVGVIAQQQGGFGSNQNLSVYLPYTTVQAQFTGDRSLRSVLLRVSDEVSTDLAQE 492
Query: 243 NIVRILGNGVVVID 256
+ +L D
Sbjct: 493 AVTTLLTRRHSTKD 506
>gi|75759230|ref|ZP_00739331.1| ABC transporter permease protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74493293|gb|EAO56408.1| ABC transporter permease protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 402
Score = 37.8 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 24/246 (9%), Positives = 76/246 (30%), Gaps = 10/246 (4%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A + +++ S ++ +G++IGV ++I V+++ G + + +G
Sbjct: 9 SIKIALSSILAHKLR------SALTMLGIIIGVGSIITVVAIGQGGEAALKSQFVGAGNQ 62
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
V + D + + +++ S + +
Sbjct: 63 TVPIHYSADINDPFGMGMVEAPKITEEDIFEIKKIPEIAHVVTTNSSMEPLDIEDKKEMV 122
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVI---IGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ S ++ +G+ + + + + ++ + M
Sbjct: 123 SITGLDSEYFAVNKVKLLKGRSLQESDVDQGNNVVMISKQMEEKVFKDANPVGKIIEMKG 182
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + F + + + ++ + I V K+ D +EK +
Sbjct: 183 QPMQIIGVYKSDNEFMGMGPSEALVPISLWPTLYG-KDEIQNISVQAKNVDNLEKAGKKA 241
Query: 245 VRILGN 250
+L +
Sbjct: 242 ADVLNS 247
>gi|328950632|ref|YP_004367967.1| protein of unknown function DUF214 [Marinithermus hydrothermalis
DSM 14884]
gi|328450956|gb|AEB11857.1| protein of unknown function DUF214 [Marinithermus hydrothermalis
DSM 14884]
Length = 403
Score = 37.8 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 31/247 (12%), Positives = 75/247 (30%), Gaps = 9/247 (3%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +AWR ++ +R+ + + I V + + S +G+ +I
Sbjct: 4 LRLAWRNIWRHRQR------TVLLVIVVAYATLTTVFFWSFADGYAASVIDAHARYIAAP 57
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
V D N L + + + +A L
Sbjct: 58 VRVASVAWYADPD-PENGLPSLEVLSSLEAVPGVRAVAPRLEFPALLRSAYASEPVTARG 116
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ S V +G+ + ++ ++ + + T G +++
Sbjct: 117 VDPSLEPRVSRVPQKVRQGRWLEGPGEVVLGYKLAERLDVRLGERVVLDTAALAGPQARG 176
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
T++G+ D+ V++ L +A+ L + + + + V E +L
Sbjct: 177 LTLVGIVDAGVSTVDHAAVFVHLADARALTGL-DTATTLALDVPRGREAE-VARRAQAVL 234
Query: 249 GNGVVVI 255
G+
Sbjct: 235 PEGLEAR 241
>gi|307708990|ref|ZP_07645450.1| permease family protein [Streptococcus mitis SK564]
gi|307620326|gb|EFN99442.1| permease family protein [Streptococcus mitis SK564]
Length = 419
Score = 37.8 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 26/249 (10%), Positives = 77/249 (30%), Gaps = 11/249 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ A+ + +++ S ++ IG++IGV +++V+M++ + + K + ++
Sbjct: 4 LKFAFSSIMAHKMR------SLLTMIGIIIGVSSVVVIMALGDSMSRYLNKNMTRSQKNI 57
Query: 69 VIQQKYYP----LVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + A + + + V P +++V + +++
Sbjct: 58 SVFFSSKKSKDGSFTQKQSAFTVSGKEEEVHVEPPKPQESWVKEAAKLKGVDNYYVTNST 117
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ N++ + + LA K D
Sbjct: 118 NAILTYKDKKVENANLTGGNRTYMEAVNNEILAGRSLREQDFKEFASVILLDEELSISLF 177
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQE-AQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
S + + + Y VY S + + L + + +++
Sbjct: 178 GSPQEAINKVVEVNGFSYRVIGVYTSPESKNSKIYGLGGLPITTNISLAANFNVDEIANI 237
Query: 244 IVRILGNGV 252
+ R+ +
Sbjct: 238 VFRVNDTSL 246
>gi|78060526|ref|YP_367101.1| ABC efflux pump, inner membrane subunit [Burkholderia sp. 383]
gi|77965076|gb|ABB06457.1| ABC efflux pump, inner membrane subunit [Burkholderia sp. 383]
Length = 405
Score = 37.8 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 47/265 (17%), Positives = 88/265 (33%), Gaps = 31/265 (11%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMS---VMNGFREDMIKRVLGINGHV 68
AWR L+ N++ +++A MIGV A ++ V+ F + GHV
Sbjct: 7 AWRNLWRNKRRTVLTMA--------MIGVAAFASSLALGYVIATFDAVREGSIDSGVGHV 58
Query: 69 VIQQKYYPLVDYQFIANR-------------LDFIPDVIKVLPFVSGQAFVSGLSSGGSG 115
+ Y + + + +P V + +S
Sbjct: 59 QVLHHGYLDLIGERPLQYGLTADEQATATHAIAALPGVATTARGIDFDGLISNGDLSYGF 118
Query: 116 VLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYG 175
V N + + + G + + G V++G +LAR LG+ +G + +++
Sbjct: 119 VGEGIEPNREPPGFFDYHTVLSGRYLSPTNPGTEVVVGAELARKLGVHVGSVVQLMASTA 178
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD 235
++G+ D D +V ++ AQ + S I VF+ D
Sbjct: 179 HGGINAT-----DAQIVGVMSTGNKDVDERIVNVTFTAAQALLRT-DRASRIAVFLSDTA 232
Query: 236 AIEKTHENIVRILGNGVVVIDWQQR 260
+ L + V W Q
Sbjct: 233 HTPAAAATLRAALPT-LDVKTWDQL 256
>gi|326798255|ref|YP_004316074.1| hypothetical protein Sph21_0828 [Sphingobacterium sp. 21]
gi|326549019|gb|ADZ77404.1| protein of unknown function DUF214 [Sphingobacterium sp. 21]
Length = 497
Score = 37.8 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 24/64 (37%), Gaps = 8/64 (12%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + +A R L N+ A +I +G+ + ++ I++ F+
Sbjct: 1 MFKNY-FKIAGRNLLRNKGYAASNIIGLA--VGIAVCMLIFIIIQ-----FQTSFDNFHT 52
Query: 63 GING 66
+
Sbjct: 53 KKDR 56
>gi|324013015|gb|EGB82234.1| ABC transporter, ATP-binding protein [Escherichia coli MS 60-1]
Length = 648
Score = 37.8 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGNDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|295093799|emb|CBK82890.1| ABC-type transport system, involved in lipoprotein release,
permease component [Coprococcus sp. ART55/1]
Length = 458
Score = 37.8 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 17/145 (11%), Positives = 43/145 (29%), Gaps = 6/145 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ + + F ++ +GVMIGV++++ +++V G + +MI +
Sbjct: 5 WHLCLMNMKRRKIRTF------LTVLGVMIGVISVVALLAVGIGVKNEMIDSAVASGSVN 58
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
I ++ I + + S G +
Sbjct: 59 QITIYSETGSKHKDRMITDRTISTLTDLANVDGCYPLYEVPVSMKYGEYEYFGNLVGVPG 118
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIG 153
+ +++ G +I
Sbjct: 119 NELDGWSLAYGENSNSSHGTPELIS 143
>gi|170683653|ref|YP_001744328.1| macrolide transporter ATP-binding /permease [Escherichia coli
SMS-3-5]
gi|170521371|gb|ACB19549.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli SMS-3-5]
Length = 648
Score = 37.8 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDYGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|110641080|ref|YP_668810.1| macrolide transporter ATP-binding /permease protein [Escherichia
coli 536]
gi|191172120|ref|ZP_03033664.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli F11]
gi|300991782|ref|ZP_07179645.1| ABC transporter, ATP-binding protein [Escherichia coli MS 200-1]
gi|122064321|sp|Q0TJH0|MACB_ECOL5 RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|110342672|gb|ABG68909.1| macrolide-specific ABC-type efflux carrier [Escherichia coli 536]
gi|190907647|gb|EDV67242.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli F11]
gi|300305536|gb|EFJ60056.1| ABC transporter, ATP-binding protein [Escherichia coli MS 200-1]
Length = 648
Score = 37.8 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGNDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|171913364|ref|ZP_02928834.1| hypothetical protein VspiD_19330 [Verrucomicrobium spinosum DSM
4136]
Length = 390
Score = 37.8 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 24/243 (9%), Positives = 51/243 (20%), Gaps = 8/243 (3%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ W L + I + +S + + L + G + G + +
Sbjct: 4 FSLIWGNLKRRKLRT---ILTLLSILVAFLLFAFLCAMKEAFTG-----GVSIAGADRLM 55
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
V + ANR+ + V V + + Y
Sbjct: 56 VRHKVSIIQTLPVSYANRIAALTGVSGVTHQTWFGGIYQDPKKNFFATMPVEPESFAKMY 115
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ G V + I +
Sbjct: 116 TEIVVPPDVMQTWLKTRNGAIVGKALMERMSRDYGWKVGSRIPITSPIWGEPANQPAWEF 175
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
V + + + + + V V V++P+ + I
Sbjct: 176 EIVGVYDVNKKGADNTSFYFRYDYFDEAREKGKGQVGWYSVRVENPENAATIAKRIDEEF 235
Query: 249 GNG 251
N
Sbjct: 236 ANS 238
>gi|167772928|ref|ZP_02444981.1| hypothetical protein ANACOL_04316 [Anaerotruncus colihominis DSM
17241]
gi|167664861|gb|EDS08991.1| hypothetical protein ANACOL_04316 [Anaerotruncus colihominis DSM
17241]
Length = 474
Score = 37.8 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 26/64 (40%), Gaps = 6/64 (9%)
Query: 15 YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKY 74
LF + + ++ IGV++G A++V++S+ G + + + + +
Sbjct: 13 NLFRRKMR------TILTVIGVVVGTCAIVVMISLGLGMNQQLENTLAQMGSRLTTIDVM 66
Query: 75 YPLV 78
Sbjct: 67 NYRY 70
>gi|317055766|ref|YP_004104233.1| hypothetical protein Rumal_1073 [Ruminococcus albus 7]
gi|315448035|gb|ADU21599.1| protein of unknown function DUF214 [Ruminococcus albus 7]
Length = 767
Score = 37.8 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 6/89 (6%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
FE ++A RY+ S +++ S + + I V + ++ + FR + + V
Sbjct: 2 FERLLALRYIKSQKRH------SIFTICSITIAVALMTLLFIGYSTFRGIVRESVYADKP 55
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIK 95
+ K Q N I D
Sbjct: 56 YHFRIMKLTEEEYEQLAENEELSISDHTN 84
>gi|297531453|ref|YP_003672728.1| ABC transporter [Geobacillus sp. C56-T3]
gi|297254705|gb|ADI28151.1| ABC transporter related protein [Geobacillus sp. C56-T3]
Length = 643
Score = 37.8 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 8/52 (15%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+++R + + + ++ +G IG+ L ++M++ NG ++ + +
Sbjct: 251 KLSFRNIKNKKWRN------ILTALGASIGIFGLSIIMALGNGVKQKLSSSI 296
>gi|256839251|ref|ZP_05544761.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|298374806|ref|ZP_06984764.1| conserved hypothetical protein [Bacteroides sp. 3_1_19]
gi|256740170|gb|EEU53494.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|298269174|gb|EFI10829.1| conserved hypothetical protein [Bacteroides sp. 3_1_19]
Length = 525
Score = 37.8 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 25/234 (10%), Positives = 58/234 (24%), Gaps = 14/234 (5%)
Query: 14 RYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQK 73
RY +K F S +FI F+G+ +G +I + K + +
Sbjct: 9 RYSSERKKYFFKS-KAFILFLGLFLGAGIMIA-----------LYKTSVYFSTDESCMMC 56
Query: 74 YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSF 133
+ V+ + + +SYL
Sbjct: 57 HVHPHVENSWKLSKHVNNGSGVKTHCVACHLPPQTNTWKHYSAKAKLGMKDVWSYLTKDS 116
Query: 134 SRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLG 193
+ F ++ + I + + I + + +
Sbjct: 117 ADFNWETKSELEHAVKYIPNESCKECHQNLFPEGITDDGVTAHLYYDENEKKLDLQCISC 176
Query: 194 MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ + M Q + + + F K+P + + + +I
Sbjct: 177 HLDAGHYNPNYNHSKMVGIPGQNTSGATSIDTSL--FFKEPTTVTSFTDYVEQI 228
>gi|300769815|ref|ZP_07079695.1| ABC superfamily ATP binding cassette transporter efflux protein
[Sphingobacterium spiritivorum ATCC 33861]
gi|300763266|gb|EFK60082.1| ABC superfamily ATP binding cassette transporter efflux protein
[Sphingobacterium spiritivorum ATCC 33861]
Length = 415
Score = 37.8 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 31/249 (12%), Positives = 73/249 (29%), Gaps = 17/249 (6%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
A L N+ F +S +GV IG+M +I V S ++ R ++ + V I
Sbjct: 11 SFGFAISALRDNKTRTF------LSLLGVTIGIMTIIGVFSAVDTLRNNLEESVRKIGSS 64
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIK-----------VLPFVSGQAFVSGLSSGGSGV 116
+ K+ F + P+ ++ + +
Sbjct: 65 TLYVDKWPWDGGPDFPWWKYINRPEPKYNDYLALKSRMTTAEHIAYVFNIGNSVAKFKSN 124
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
I+ + ++ +F + + + I+ G + +
Sbjct: 125 SATNITVNAATHEYYQTQSAEIIEGRNFTETESNVGSMVVVLGATIAEGLFPSGNALGQK 184
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
++ +G + M + + ++ + N E I + VK
Sbjct: 185 ISLLGRKLTVVGVLKKEGSGMLINTSSDDIAFIPFSLGRNLANYEQYNPSIVITVKPTYT 244
Query: 237 IEKTHENIV 245
+E+ +
Sbjct: 245 LEEGESELK 253
>gi|15893745|ref|NP_347094.1| ATP transporter permease [Clostridium acetobutylicum ATCC 824]
gi|15023311|gb|AAK78434.1|AE007560_3 Predicted ATP transporter permease component [Clostridium
acetobutylicum ATCC 824]
gi|325507868|gb|ADZ19504.1| ATP transporter permease component [Clostridium acetobutylicum EA
2018]
Length = 832
Score = 37.8 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
I+A RY+ ++ + I+ +G+++ V + +++ + R L I
Sbjct: 1 MNISKILALRYIKRQKRR------TIITILGIVLSVALFTAIGTMLASLQHYQTSRELDI 54
Query: 65 NGHVVIQQ 72
NG +Q
Sbjct: 55 NGGYEVQY 62
>gi|323967315|gb|EGB62738.1| ABC transporter [Escherichia coli M863]
gi|327253667|gb|EGE65296.1| macrolide export ATP-binding/permease protein macB [Escherichia
coli STEC_7v]
Length = 648
Score = 37.8 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKANVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|322369034|ref|ZP_08043601.1| hypothetical protein ZOD2009_06092 [Haladaptatus paucihalophilus
DX253]
gi|320551765|gb|EFW93412.1| hypothetical protein ZOD2009_06092 [Haladaptatus paucihalophilus
DX253]
Length = 415
Score = 37.8 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 10/60 (16%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ R ++WR + ++ S ++ +G++IGV ++I +++ + ++ +V
Sbjct: 1 MNFRQSFQMSWRSIRDHKLR------SVLTTLGIIIGVGSVITFVTLGASLQAAIVGQVS 54
>gi|260583565|ref|ZP_05851313.1| transmembrane protein Vexp1 [Granulicatella elegans ATCC 700633]
gi|260158191|gb|EEW93259.1| transmembrane protein Vexp1 [Granulicatella elegans ATCC 700633]
Length = 423
Score = 37.8 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 31/248 (12%), Positives = 66/248 (26%), Gaps = 15/248 (6%)
Query: 15 YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVM---------NGFREDMIKRVLGIN 65
Y+F RK + I I F + + M L+ S + + F
Sbjct: 8 YIFRKRKKSLILITIFSVILACIFACMRLLSTTSTVQQQLKQTTTSSFEFRKKDGTSFSF 67
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
V +K + + + + V Q L +
Sbjct: 68 KQVEEIKKVADNESLEKHYQTIAKLENHSVVTGEEKIQRDDIDEEMKNVVSLNSSSQVNR 127
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ + ++I ++LA +++GD I + +
Sbjct: 128 EKLFSSGVFSLLKGKMIEATDVHKIMIHEELASKNQLNLGDTITLDVIQQETGEKKKVDY 187
Query: 186 SKSYTVL----GMFRMRFPDYDNGMVYMSLQEAQLYF--NLENAVSGIEVFVKDPDAIEK 239
+ D+ V+ Q F L V+G+ ++ + + K
Sbjct: 188 EIVGIFSGKKQETYTGLTSDFSENTVFTDYQSIHQLFTSELGEVVTGLNIYASSSEELLK 247
Query: 240 THENIVRI 247
+ I +
Sbjct: 248 MKQAIEAL 255
>gi|326790801|ref|YP_004308622.1| hypothetical protein Clole_1700 [Clostridium lentocellum DSM
5427]
gi|326541565|gb|ADZ83424.1| protein of unknown function DUF214 [Clostridium lentocellum DSM
5427]
Length = 450
Score = 37.8 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 14 RYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQK 73
R L+ + + ++ +GV+IG ++I+++S+ ++M ++ + +IQ
Sbjct: 12 RNLWRRKLR------TALTILGVVIGACSIILMLSLGLAMEKNMEEQFAQMGDLTLIQVW 65
Query: 74 YY 75
Y
Sbjct: 66 SY 67
>gi|261420665|ref|YP_003254347.1| ABC transporter [Geobacillus sp. Y412MC61]
gi|319768334|ref|YP_004133835.1| ABC transporter [Geobacillus sp. Y412MC52]
gi|261377122|gb|ACX79865.1| ABC transporter related protein [Geobacillus sp. Y412MC61]
gi|317113200|gb|ADU95692.1| ABC transporter related protein [Geobacillus sp. Y412MC52]
Length = 643
Score = 37.8 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 8/52 (15%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+++R + + + ++ +G IG+ L ++M++ NG ++ + +
Sbjct: 251 KLSFRNIKNKKWRN------ILTALGASIGIFGLSIIMALGNGVKQKLSSSI 296
>gi|319938912|ref|ZP_08013276.1| ABC transporter ATP-binding protein [Streptococcus anginosus
1_2_62CV]
gi|319811962|gb|EFW08228.1| ABC transporter ATP-binding protein [Streptococcus anginosus
1_2_62CV]
Length = 425
Score = 37.8 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 9/51 (17%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
A + ++ +F ++ +G++IGVM+++V++++ +G
Sbjct: 4 WKFAINSIMGHKMRSF------LTMLGIIIGVMSVVVIVALGSGMSNAFTD 48
>gi|163942938|ref|YP_001647822.1| hypothetical protein BcerKBAB4_5048 [Bacillus weihenstephanensis
KBAB4]
gi|163865135|gb|ABY46194.1| protein of unknown function DUF214 [Bacillus weihenstephanensis
KBAB4]
Length = 399
Score = 37.8 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 23/246 (9%), Positives = 76/246 (30%), Gaps = 10/246 (4%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A + +++ S ++ +G++IGV ++I V+++ G + + +G
Sbjct: 6 SMKIALSSILAHKLR------SALTMLGIIIGVGSIITVVAIGQGGEAALKSQFVGSGNQ 59
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
V + D + + +++ S + +
Sbjct: 60 TVPIHYSADMNDPFGMEMVEAPKITEEDIFEIKKIPEIAHVVTTNSSMEPIDIEDKIEMV 119
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVI---IGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ S ++ +G+ + + + + ++ + M
Sbjct: 120 NITGLDSEYFAVNKVKLLKGRSLQESDVDQGNNVVMISKQMEEKMFKDANPVGKIIEMKG 179
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + F + + + ++ + I V K+ D +E+ +
Sbjct: 180 QPMQIIGVYKSDNEFMGMGPSEALVPISLWPTLYG-KDEIQNISVQAKNVDNLEQAGKKA 238
Query: 245 VRILGN 250
+L +
Sbjct: 239 ADVLNS 244
>gi|167622208|ref|YP_001672502.1| hypothetical protein Shal_0267 [Shewanella halifaxensis HAW-EB4]
gi|167352230|gb|ABZ74843.1| protein of unknown function DUF214 [Shewanella halifaxensis
HAW-EB4]
Length = 412
Score = 37.8 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 41/269 (15%), Positives = 102/269 (37%), Gaps = 24/269 (8%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+++AWR L+ +++ ++++ ++ L+ ++++ G MI+ L I
Sbjct: 5 ILLAWRSLWQHKRR------TWLTLGAMIFCNSLLVFMITLQAGTYPMMIENTLRIFSSQ 58
Query: 69 VIQQKYYPLVDYQFIANRLD--------FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + L + + LD + ++ S ++ G+LV G
Sbjct: 59 LQINQQGYLDEPELRLRILDSSDLVARLELQFPELIVIPRSRGFLLAASEQRSVGMLVNG 118
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
++ + + + V++G+ LA+NL +++GD++ ++ +
Sbjct: 119 VAPDKERLASSIPQQIIIGRYLEAGDNNLVVLGERLAKNLQVTVGDELTVMGSTMEGGFA 178
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+++G+F + D +SL Q F + N VS + + +
Sbjct: 179 AGV-----LSIVGIFNSGINELDRTTSQVSLATFQRLFEMPNQVSLLSINAPSMSQVSFY 233
Query: 241 HENIVRIL-----GNGVVVIDWQQRYQIF 264
+ + +L + + DWQQ
Sbjct: 234 QQQLQSLLQLSSAEAKLTIHDWQQLNPGI 262
>gi|81300032|ref|YP_400240.1| DevC protein [Synechococcus elongatus PCC 7942]
gi|22002528|gb|AAM82679.1| DevC [Synechococcus elongatus PCC 7942]
gi|81168913|gb|ABB57253.1| DevC protein [Synechococcus elongatus PCC 7942]
Length = 392
Score = 37.8 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 33/251 (13%), Positives = 76/251 (30%), Gaps = 13/251 (5%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+AWR L R +++ + ISF G ++M + GFR+ + ++ ++ +
Sbjct: 15 LAWRQLARQRVRLLVAL-AGISFAG---------LLMFMQMGFRDGLFDSIVTLHEAIAA 64
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
+ R + + L Q+ + L
Sbjct: 65 DVVLISPQSTALTSMRPFPQRRLYQALSLSDVQSVSPLYIGLVNWKNPENRQPRSILTLG 124
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
S ++ + + I + S + + + + + +
Sbjct: 125 ISPDEAAFDLKGLPENLNAIRIPD-VVLFDQTSRSEFGPVAQRFRSGQSVVTEVGERRIR 183
Query: 191 VLGMFRMRFPDYDNGMVYMSLQEAQLYF--NLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
V G+F M +G + S F + + + + I + + + R L
Sbjct: 184 VGGLFTMGATFGADGNIITSDLNFLRIFPQRRRDEIDVGLIRAEPGTNIAQLVQELQRSL 243
Query: 249 GNGVVVIDWQQ 259
V V+ +Q
Sbjct: 244 PPDVRVMSKRQ 254
>gi|289167688|ref|YP_003445957.1| ABC transporter, permease [Streptococcus mitis B6]
gi|288907255|emb|CBJ22090.1| ABC transporter, permease [Streptococcus mitis B6]
Length = 419
Score = 37.8 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ A+ + +++ +F ++ IG++IGV +++V+M++ + + K + ++
Sbjct: 4 LKFAFSSIMAHKMRSF------LTMIGIIIGVSSVVVIMALGDSMSRQINKNMTKSQKNI 57
Query: 69 VIQQ 72
+
Sbjct: 58 HVFF 61
>gi|119356919|ref|YP_911563.1| hypothetical protein Cpha266_1098 [Chlorobium phaeobacteroides DSM
266]
gi|119354268|gb|ABL65139.1| protein of unknown function DUF214 [Chlorobium phaeobacteroides DSM
266]
Length = 429
Score = 37.8 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 37/272 (13%), Positives = 73/272 (26%), Gaps = 23/272 (8%)
Query: 11 VAWRYLFSNRKNAFISIA---SFISFIGVMIGVMALI------------VVMSVMNGFRE 55
+A R LF N + I+I + + + ++ G M S G +
Sbjct: 9 IALRNLFRNSRRTLITILVSSAGFAALAIVAGYMDFTFYGLKEMTICRGFTSSGGTGHIQ 68
Query: 56 DMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPF--VSGQAFVSGLSSGG 113
+ + L ++ Q + I I + F + S G
Sbjct: 69 ILTQESLQKEERYPLEYGIADNEKIQALIASNKSIKATIPRIEFNGLISNGEKSISFLGI 128
Query: 114 SGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSP 173
+ + + S + + + + L + S
Sbjct: 129 GIDPEKESELMHYWNALDKMSSKTKMDDSSYKKLELTGQNGVLLGEGMAKALNAETGSSL 188
Query: 174 YGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKD 233
T + + TV G+ + D + ++ AQ + VS I V +
Sbjct: 189 MLMGTTVDGAVNVLDVTVAGVVKSTMKSIDRYYLVTNISTAQSLMQT-DRVSKIVVVLDK 247
Query: 234 PDAIEKTHENIVRILGNG-----VVVIDWQQR 260
D ++ + VI W Q
Sbjct: 248 TDNTAAVTPHVSAAINGSGKPALFTVIPWDQL 279
>gi|94967752|ref|YP_589800.1| ABC efflux pump, inner membrane subunit [Candidatus Koribacter
versatilis Ellin345]
gi|94549802|gb|ABF39726.1| ABC efflux pump, inner membrane subunit [Candidatus Koribacter
versatilis Ellin345]
Length = 410
Score = 37.8 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ ++ L++N+ S ++ +GV+I V +LI V++ +NG + +++ +
Sbjct: 6 AIRISLASLWANKLR------SVLTLLGVVIAVASLIAVVTFVNGINGYVAEKLFNLGAD 59
Query: 68 VV 69
V
Sbjct: 60 VF 61
>gi|238922775|ref|YP_002936288.1| hypothetical protein EUBREC_0363 [Eubacterium rectale ATCC 33656]
gi|238874447|gb|ACR74154.1| Hypothetical protein EUBREC_0363 [Eubacterium rectale ATCC 33656]
Length = 441
Score = 37.8 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 27/78 (34%), Gaps = 1/78 (1%)
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVS-GIEVFVKDPDAIE 238
+ + Y + +Y+ LE S G EV++ + I+
Sbjct: 189 YKVDSDFEIYDSNEEGTSVYIHSPYNSIYVDYDYIVELLGLEYTASTGSEVYIDKIEHID 248
Query: 239 KTHENIVRILGNGVVVID 256
+ + ++ G+ V + D
Sbjct: 249 AVKKQLKKMYGDNVEIYD 266
>gi|195939542|ref|ZP_03084924.1| macrolide transporter ATP-binding /permease protein [Escherichia
coli O157:H7 str. EC4024]
Length = 611
Score = 37.8 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 220 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 273
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 274 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 333
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 334 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 393
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 394 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 453
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 454 RLLSLRHGKKD-------FFTWNMDGVLKT 476
>gi|323185156|gb|EFZ70521.1| macrolide export ATP-binding/permease protein macB [Escherichia
coli 1357]
Length = 648
Score = 37.8 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|323937986|gb|EGB34248.1| ABC transporter [Escherichia coli E1520]
Length = 648
Score = 37.8 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|291523698|emb|CBK89285.1| ABC-type transport system, involved in lipoprotein release,
permease component [Eubacterium rectale DSM 17629]
Length = 441
Score = 37.8 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 27/78 (34%), Gaps = 1/78 (1%)
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVS-GIEVFVKDPDAIE 238
+ + Y + +Y+ LE S G EV++ + I+
Sbjct: 189 YKVDSDFEIYDSNEEGTSVYIHSPYNSIYVDYDYIVELLGLEYTASTGSEVYIDKIEHID 248
Query: 239 KTHENIVRILGNGVVVID 256
+ + ++ G+ V + D
Sbjct: 249 AVKKQLKKMYGDNVEIYD 266
>gi|150010408|ref|YP_001305151.1| hypothetical protein BDI_3845 [Parabacteroides distasonis ATCC
8503]
gi|149938832|gb|ABR45529.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
8503]
Length = 525
Score = 37.8 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 25/234 (10%), Positives = 58/234 (24%), Gaps = 14/234 (5%)
Query: 14 RYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQK 73
RY +K F S +FI F+G+ +G +I + K + +
Sbjct: 9 RYSSERKKYFFKS-KAFILFLGLFLGAGIMIA-----------LYKTSVYFSTDESCMMC 56
Query: 74 YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSF 133
+ V+ + + +SYL
Sbjct: 57 HVHPHVENSWKLSKHVNNGSGVKTHCVACHLPPQTNTWKHYSAKAKLGMKDVWSYLTKDS 116
Query: 134 SRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLG 193
+ F ++ + I + + I + + +
Sbjct: 117 ADFNWETKSELEHAVKYIPNESCKECHQNLFPEGITDDGVTAHLYYDENEKKLDLQCISC 176
Query: 194 MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ + M Q + + + F K+P + + + +I
Sbjct: 177 HLDAGHYNPNYNHSKMVGIPGQNTSGATSIDTSL--FFKEPTTVTSFTDYVEQI 228
>gi|124008788|ref|ZP_01693477.1| ABC transporter, permease protein [Microscilla marina ATCC 23134]
gi|123985701|gb|EAY25581.1| ABC transporter, permease protein [Microscilla marina ATCC 23134]
Length = 417
Score = 37.8 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 20/239 (8%), Positives = 56/239 (23%), Gaps = 12/239 (5%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
+ N+ F ++ GV G+ L++++ G + + + + + +
Sbjct: 14 MRKNKLRTF------LTAFGVFWGIFMLVLLLGAGKGMQNGVQREFGNEAKNSLWVWRGK 67
Query: 76 PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF------SYL 129
+ + + I + L+ +++
Sbjct: 68 TTMPHDGLKPGRSIIFSNDDYEAIEREVPGIKRLARRNRLSGAYTLNHKTRNASFPLYGA 127
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
F G + + + K+ +
Sbjct: 128 NRVFFEINGEELVKGRFFNPNDLNEKRKVMILGERAKKVLFGDSTNAIGKYVNVKGVHFK 187
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ Y+ Q F+ + I +D + +I R+L
Sbjct: 188 VIGTYTLDGGGGRREERSYIPFSTYQSIFDTRPRIHLIGALAEDHVSAASIETDIRRVL 246
>gi|115373041|ref|ZP_01460344.1| ABC-type transport systems, involved in lipoprotein release,
permease components [Stigmatella aurantiaca DW4/3-1]
gi|115369953|gb|EAU68885.1| ABC-type transport systems, involved in lipoprotein release,
permease components [Stigmatella aurantiaca DW4/3-1]
Length = 386
Score = 37.8 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 28/62 (45%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
+ ++ IG+ IGV L+ ++ ++ G +++ I + + K+ ++ + R
Sbjct: 3 TVLTTIGIGIGVATLLAIVGIIQGLNASFDRQLATIGSNNLFISKFPWVMGGDWWLYRNR 62
Query: 89 FI 90
Sbjct: 63 KN 64
>gi|82543366|ref|YP_407313.1| macrolide transporter ATP-binding /permease protein [Shigella
boydii Sb227]
gi|122064333|sp|Q323M3|MACB_SHIBS RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|81244777|gb|ABB65485.1| putative ATP-binding component of a transport system [Shigella
boydii Sb227]
gi|320183182|gb|EFW58040.1| Macrolide export ATP-binding/permease protein MacB [Shigella
flexneri CDC 796-83]
gi|332097047|gb|EGJ02030.1| macrolide export ATP-binding/permease protein macB [Shigella boydii
3594-74]
Length = 648
Score = 37.8 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|323976734|gb|EGB71822.1| ABC transporter [Escherichia coli TW10509]
Length = 648
Score = 37.8 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|315294559|gb|EFU53907.1| ABC transporter, ATP-binding protein [Escherichia coli MS 153-1]
Length = 645
Score = 37.8 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|297516222|ref|ZP_06934608.1| macrolide transporter ATP-binding /permease protein [Escherichia
coli OP50]
Length = 604
Score = 37.8 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 213 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 266
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 267 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 326
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 327 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 386
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 387 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 446
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 447 RLLSLRHGKKD-------FFTWNMDGVLKT 469
>gi|218553465|ref|YP_002386378.1| macrolide transporter ATP-binding /permease [Escherichia coli IAI1]
gi|218694353|ref|YP_002402020.1| macrolide transporter ATP-binding /permease protein [Escherichia
coli 55989]
gi|293433177|ref|ZP_06661605.1| hypothetical protein ECCG_01302 [Escherichia coli B088]
gi|300817019|ref|ZP_07097238.1| ABC transporter, ATP-binding protein [Escherichia coli MS 107-1]
gi|218351085|emb|CAU96789.1| fused macrolide transporter subunits of ABC superfamily:
ATP-binding component ; membrane component [Escherichia
coli 55989]
gi|218360233|emb|CAQ97783.1| fused macrolide transporter subunits of ABC superfamily:
ATP-binding component ; membrane component [Escherichia
coli IAI1]
gi|291323996|gb|EFE63418.1| hypothetical protein ECCG_01302 [Escherichia coli B088]
gi|300530371|gb|EFK51433.1| ABC transporter, ATP-binding protein [Escherichia coli MS 107-1]
Length = 648
Score = 37.8 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|209918128|ref|YP_002292212.1| macrolide transporter ATP-binding /permease [Escherichia coli SE11]
gi|307311733|ref|ZP_07591373.1| ABC transporter related protein [Escherichia coli W]
gi|209911387|dbj|BAG76461.1| putative ABC transporter ATP-binding component [Escherichia coli
SE11]
gi|306908288|gb|EFN38787.1| ABC transporter related protein [Escherichia coli W]
gi|315060165|gb|ADT74492.1| fused macrolide transporter subunits of ABC superfamily:
ATP-binding component/membrane component [Escherichia
coli W]
gi|320202274|gb|EFW76845.1| Macrolide export ATP-binding/permease protein MacB [Escherichia
coli EC4100B]
gi|323379278|gb|ADX51546.1| protein of unknown function DUF214 [Escherichia coli KO11]
gi|323947163|gb|EGB43173.1| ABC transporter [Escherichia coli H120]
gi|324019031|gb|EGB88250.1| ABC transporter, ATP-binding protein [Escherichia coli MS 117-3]
Length = 648
Score = 37.8 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|16128847|ref|NP_415400.1| fused macrolide transporter subunits of ABC superfamily:
ATP-binding component/membrane component [Escherichia
coli str. K-12 substr. MG1655]
gi|89107730|ref|AP_001510.1| fused macrolide transporter subunits and ATP-binding component and
membrane component of ABC superfamily [Escherichia coli
str. K-12 substr. W3110]
gi|170080538|ref|YP_001729858.1| macrolide ABC transporter ATP-binding/membrane protein [Escherichia
coli str. K-12 substr. DH10B]
gi|238900138|ref|YP_002925934.1| fused macrolide transporter subunits of ABC superfamily:
ATP-binding component/membrane component [Escherichia
coli BW2952]
gi|256023494|ref|ZP_05437359.1| macrolide transporter ATP-binding /permease protein [Escherichia
sp. 4_1_40B]
gi|300950106|ref|ZP_07164053.1| ABC transporter, ATP-binding protein [Escherichia coli MS 116-1]
gi|300954453|ref|ZP_07166905.1| ABC transporter, ATP-binding protein [Escherichia coli MS 175-1]
gi|301024392|ref|ZP_07188079.1| ABC transporter, ATP-binding protein [Escherichia coli MS 196-1]
gi|301646322|ref|ZP_07246211.1| ABC transporter, ATP-binding protein [Escherichia coli MS 146-1]
gi|307137507|ref|ZP_07496863.1| macrolide transporter ATP-binding /permease protein [Escherichia
coli H736]
gi|331641400|ref|ZP_08342535.1| macrolide export ATP-binding/permease protein MacB [Escherichia
coli H736]
gi|2829633|sp|P75831|MACB_ECOLI RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|1787105|gb|AAC73966.1| fused macrolide transporter subunits of ABC superfamily:
ATP-binding component/membrane component [Escherichia
coli str. K-12 substr. MG1655]
gi|4062463|dbj|BAA35598.1| fused macrolide transporter subunits and ATP-binding component and
membrane component of ABC superfamily [Escherichia coli
str. K12 substr. W3110]
gi|15487341|dbj|BAB64542.1| macrolide-specific ABC-type efflux carrier [Escherichia coli]
gi|169888373|gb|ACB02080.1| fused macrolide transporter subunits of ABC superfamily:
ATP-binding component; membrane component [Escherichia
coli str. K-12 substr. DH10B]
gi|238861205|gb|ACR63203.1| fused macrolide transporter subunits of ABC superfamily:
ATP-binding component/membrane component [Escherichia
coli BW2952]
gi|260449974|gb|ACX40396.1| ABC transporter related protein [Escherichia coli DH1]
gi|299880399|gb|EFI88610.1| ABC transporter, ATP-binding protein [Escherichia coli MS 196-1]
gi|300318603|gb|EFJ68387.1| ABC transporter, ATP-binding protein [Escherichia coli MS 175-1]
gi|300450596|gb|EFK14216.1| ABC transporter, ATP-binding protein [Escherichia coli MS 116-1]
gi|301075456|gb|EFK90262.1| ABC transporter, ATP-binding protein [Escherichia coli MS 146-1]
gi|315135528|dbj|BAJ42687.1| macrolide transporter ATP-binding/permease protein [Escherichia
coli DH1]
gi|315619191|gb|EFU99770.1| macrolide export ATP-binding/permease protein macB [Escherichia
coli 3431]
gi|323942796|gb|EGB38961.1| ABC transporter [Escherichia coli E482]
gi|331038198|gb|EGI10418.1| macrolide export ATP-binding/permease protein MacB [Escherichia
coli H736]
Length = 648
Score = 37.8 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|157160402|ref|YP_001457720.1| macrolide transporter ATP-binding /permease protein [Escherichia
coli HS]
gi|170020718|ref|YP_001725672.1| macrolide transporter ATP-binding /permease protein [Escherichia
coli ATCC 8739]
gi|188496471|ref|ZP_03003741.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli 53638]
gi|194438719|ref|ZP_03070806.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli 101-1]
gi|253774091|ref|YP_003036922.1| macrolide transporter ATP-binding /permease [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254160994|ref|YP_003044102.1| macrolide transporter ATP-binding /permease [Escherichia coli B
str. REL606]
gi|260854171|ref|YP_003228062.1| fused macrolide transporter subunits of ABC superfamily:
ATP-binding component/membrane component [Escherichia
coli O26:H11 str. 11368]
gi|260867052|ref|YP_003233454.1| fused macrolide transporter subunits of ABC superfamily:
ATP-binding component/membrane component [Escherichia
coli O111:H- str. 11128]
gi|300902415|ref|ZP_07120397.1| ABC transporter, ATP-binding protein [Escherichia coli MS 84-1]
gi|300921089|ref|ZP_07137473.1| ABC transporter, ATP-binding protein [Escherichia coli MS 115-1]
gi|300922548|ref|ZP_07138649.1| ABC transporter, ATP-binding protein [Escherichia coli MS 182-1]
gi|300928424|ref|ZP_07143957.1| ABC transporter, ATP-binding protein [Escherichia coli MS 187-1]
gi|301305347|ref|ZP_07211442.1| ABC transporter, ATP-binding protein [Escherichia coli MS 124-1]
gi|301328607|ref|ZP_07221668.1| ABC transporter, ATP-binding protein [Escherichia coli MS 78-1]
gi|312971006|ref|ZP_07785185.1| macrolide export ATP-binding/permease protein macB [Escherichia
coli 1827-70]
gi|331651898|ref|ZP_08352917.1| macrolide export ATP-binding/permease protein MacB [Escherichia
coli M718]
gi|331667253|ref|ZP_08368118.1| macrolide export ATP-binding/permease protein MacB [Escherichia
coli TA271]
gi|331672416|ref|ZP_08373207.1| macrolide export ATP-binding/permease protein MacB [Escherichia
coli TA280]
gi|157066082|gb|ABV05337.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli HS]
gi|169755646|gb|ACA78345.1| ABC transporter related [Escherichia coli ATCC 8739]
gi|188491670|gb|EDU66773.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli 53638]
gi|194422351|gb|EDX38351.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli 101-1]
gi|242376694|emb|CAQ31407.1| macB, subunit of MacAB-TolC Macrolide Efflux Transport System
[Escherichia coli BL21(DE3)]
gi|253325135|gb|ACT29737.1| ABC transporter related [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253972895|gb|ACT38566.1| fused macrolide transporter subunits of ABC superfamily:
ATP-binding component/membrane component [Escherichia
coli B str. REL606]
gi|253977109|gb|ACT42779.1| fused macrolide transporter subunits of ABC superfamily:
ATP-binding component/membrane component [Escherichia
coli BL21(DE3)]
gi|257752820|dbj|BAI24322.1| fused macrolide transporter subunits of ABC superfamily:
ATP-binding component/membrane component [Escherichia
coli O26:H11 str. 11368]
gi|257763408|dbj|BAI34903.1| fused macrolide transporter subunits of ABC superfamily:
ATP-binding component/membrane component [Escherichia
coli O111:H- str. 11128]
gi|300405447|gb|EFJ88985.1| ABC transporter, ATP-binding protein [Escherichia coli MS 84-1]
gi|300411940|gb|EFJ95250.1| ABC transporter, ATP-binding protein [Escherichia coli MS 115-1]
gi|300421094|gb|EFK04405.1| ABC transporter, ATP-binding protein [Escherichia coli MS 182-1]
gi|300463587|gb|EFK27080.1| ABC transporter, ATP-binding protein [Escherichia coli MS 187-1]
gi|300839365|gb|EFK67125.1| ABC transporter, ATP-binding protein [Escherichia coli MS 124-1]
gi|300844999|gb|EFK72759.1| ABC transporter, ATP-binding protein [Escherichia coli MS 78-1]
gi|310336767|gb|EFQ01934.1| macrolide export ATP-binding/permease protein macB [Escherichia
coli 1827-70]
gi|315257917|gb|EFU37885.1| ABC transporter, ATP-binding protein [Escherichia coli MS 85-1]
gi|323155747|gb|EFZ41916.1| macrolide export ATP-binding/permease protein macB [Escherichia
coli EPECa14]
gi|323175499|gb|EFZ61094.1| macrolide export ATP-binding/permease protein macB [Escherichia
coli 1180]
gi|323962992|gb|EGB58564.1| ABC transporter [Escherichia coli H489]
gi|331050176|gb|EGI22234.1| macrolide export ATP-binding/permease protein MacB [Escherichia
coli M718]
gi|331065609|gb|EGI37502.1| macrolide export ATP-binding/permease protein MacB [Escherichia
coli TA271]
gi|331070611|gb|EGI41975.1| macrolide export ATP-binding/permease protein MacB [Escherichia
coli TA280]
Length = 648
Score = 37.8 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|325294600|ref|YP_004281114.1| hypothetical protein Dester_0400 [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065048|gb|ADY73055.1| protein of unknown function DUF214 [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 397
Score = 37.8 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 35/241 (14%), Positives = 68/241 (28%), Gaps = 13/241 (5%)
Query: 15 YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKY 74
Y N+K +S IGV IGV +L +M + ++ ++K + + V+
Sbjct: 9 YFKENKKRM------ILSVIGVAIGVFSLTFMMGITGALKQQVLKALGNLGSDVIAVIPG 62
Query: 75 YPLV-----DYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
L S +A + +D +
Sbjct: 63 EVKNLGGRTIQLSFYPTLTLKDAEAIKEKCPSVKAVSPYKQVSPNVHYGGKSVKADVFGV 122
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILS--PYGDVTPMGMGIRSK 187
+ + G I + + K P G V +
Sbjct: 123 NSEYIEIAGYTPLCGRFLTKEDIEEISQVAVIGIDVAKELYNKTCPVGKVIYLFNAPYKI 182
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRI 247
+ + + VY+ + A + + + GI V PD I +T + + +
Sbjct: 183 VGVMEKRGTDLSGENLDERVYIPITSAVKRISNVDYIDGIYVLPFSPDLIPETIKEVEGL 242
Query: 248 L 248
L
Sbjct: 243 L 243
>gi|320175320|gb|EFW50426.1| Macrolide export ATP-binding/permease protein MacB [Shigella
dysenteriae CDC 74-1112]
Length = 648
Score = 37.8 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|309795324|ref|ZP_07689742.1| ABC transporter, ATP-binding protein [Escherichia coli MS 145-7]
gi|308120974|gb|EFO58236.1| ABC transporter, ATP-binding protein [Escherichia coli MS 145-7]
Length = 648
Score = 37.8 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|293414162|ref|ZP_06656811.1| ABC transporter [Escherichia coli B185]
gi|291434220|gb|EFF07193.1| ABC transporter [Escherichia coli B185]
Length = 648
Score = 37.8 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGILKT 513
>gi|284920733|emb|CBG33796.1| macrolide export ATP-binding/permease protein [Escherichia coli
042]
Length = 648
Score = 37.8 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|218704308|ref|YP_002411827.1| macrolide transporter ATP-binding /permease protein [Escherichia
coli UMN026]
gi|293404187|ref|ZP_06648181.1| macrolide transporter ATP-binding/permease [Escherichia coli
FVEC1412]
gi|298379968|ref|ZP_06989573.1| macrolide transporter ATP-binding/permease [Escherichia coli
FVEC1302]
gi|300895698|ref|ZP_07114294.1| ABC transporter, ATP-binding protein [Escherichia coli MS 198-1]
gi|331662293|ref|ZP_08363216.1| macrolide export ATP-binding/permease protein MacB 1 [Escherichia
coli TA143]
gi|218431405|emb|CAR12283.1| fused macrolide transporter subunits of ABC superfamily:
ATP-binding component ; membrane component [Escherichia
coli UMN026]
gi|291428773|gb|EFF01798.1| macrolide transporter ATP-binding/permease [Escherichia coli
FVEC1412]
gi|298279666|gb|EFI21174.1| macrolide transporter ATP-binding/permease [Escherichia coli
FVEC1302]
gi|300360367|gb|EFJ76237.1| ABC transporter, ATP-binding protein [Escherichia coli MS 198-1]
gi|331060715|gb|EGI32679.1| macrolide export ATP-binding/permease protein MacB 1 [Escherichia
coli TA143]
Length = 648
Score = 37.8 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|24112255|ref|NP_706765.1| macrolide transporter ATP-binding /permease protein [Shigella
flexneri 2a str. 301]
gi|30062367|ref|NP_836538.1| macrolide transporter ATP-binding /permease protein [Shigella
flexneri 2a str. 2457T]
gi|81839292|sp|Q83LR7|MACB_SHIFL RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|24051105|gb|AAN42472.1| putative ATP-binding component of a transport system [Shigella
flexneri 2a str. 301]
gi|30040612|gb|AAP16344.1| putative ATP-binding component of a transport system [Shigella
flexneri 2a str. 2457T]
gi|281600208|gb|ADA73192.1| Macrolide export ATP-binding/permease protein macB [Shigella
flexneri 2002017]
gi|313650208|gb|EFS14620.1| macrolide export ATP-binding/permease protein macB [Shigella
flexneri 2a str. 2457T]
Length = 648
Score = 37.8 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|15800637|ref|NP_286651.1| macrolide transporter ATP-binding /permease protein [Escherichia
coli O157:H7 EDL933]
gi|81860835|sp|Q8XED0|MACB_ECO57 RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|12513909|gb|AAG55261.1|AE005269_5 putative ATP-binding component of a transport system [Escherichia
coli O157:H7 str. EDL933]
Length = 648
Score = 37.8 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|293409258|ref|ZP_06652834.1| conserved hypothetical protein [Escherichia coli B354]
gi|291469726|gb|EFF12210.1| conserved hypothetical protein [Escherichia coli B354]
Length = 648
Score = 37.8 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|218700606|ref|YP_002408235.1| macrolide transporter ATP-binding /permease [Escherichia coli
IAI39]
gi|300935728|ref|ZP_07150695.1| ABC transporter, ATP-binding protein [Escherichia coli MS 21-1]
gi|301020525|ref|ZP_07184609.1| ABC transporter, ATP-binding protein [Escherichia coli MS 69-1]
gi|218370592|emb|CAR18399.1| fused macrolide transporter subunits of ABC superfamily:
ATP-binding component ; membrane component [Escherichia
coli IAI39]
gi|300398658|gb|EFJ82196.1| ABC transporter, ATP-binding protein [Escherichia coli MS 69-1]
gi|300459078|gb|EFK22571.1| ABC transporter, ATP-binding protein [Escherichia coli MS 21-1]
Length = 648
Score = 37.8 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|74311424|ref|YP_309843.1| macrolide transporter ATP-binding /permease [Shigella sonnei Ss046]
gi|122064335|sp|Q3Z3Q4|MACB_SHISS RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|73854901|gb|AAZ87608.1| putative ATP-binding component of a transport system [Shigella
sonnei Ss046]
gi|323165816|gb|EFZ51602.1| macrolide export ATP-binding/permease protein macB [Shigella sonnei
53G]
Length = 648
Score = 37.8 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|15830219|ref|NP_308992.1| macrolide transporter ATP-binding /permease protein [Escherichia
coli O157:H7 str. Sakai]
gi|168752460|ref|ZP_02777482.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli O157:H7 str. EC4113]
gi|168758795|ref|ZP_02783802.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli O157:H7 str. EC4401]
gi|168765084|ref|ZP_02790091.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli O157:H7 str. EC4501]
gi|168769856|ref|ZP_02794863.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli O157:H7 str. EC4486]
gi|168777874|ref|ZP_02802881.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli O157:H7 str. EC4196]
gi|168783790|ref|ZP_02808797.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli O157:H7 str. EC4076]
gi|168789131|ref|ZP_02814138.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli O157:H7 str. EC869]
gi|168802710|ref|ZP_02827717.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli O157:H7 str. EC508]
gi|208808854|ref|ZP_03251191.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli O157:H7 str. EC4206]
gi|208815121|ref|ZP_03256300.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli O157:H7 str. EC4045]
gi|208822129|ref|ZP_03262448.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli O157:H7 str. EC4042]
gi|209395862|ref|YP_002269553.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli O157:H7 str. EC4115]
gi|217326614|ref|ZP_03442698.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli O157:H7 str. TW14588]
gi|254792080|ref|YP_003076917.1| macrolide transporter ATP-binding /permease [Escherichia coli
O157:H7 str. TW14359]
gi|261225535|ref|ZP_05939816.1| putative ATP-binding component of a transport system [Escherichia
coli O157:H7 str. FRIK2000]
gi|261258496|ref|ZP_05951029.1| putative ATP-binding component of a transport system [Escherichia
coli O157:H7 str. FRIK966]
gi|291281883|ref|YP_003498701.1| Macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli O55:H7 str. CB9615]
gi|13360424|dbj|BAB34388.1| putative ATP-binding component of a transport system [Escherichia
coli O157:H7 str. Sakai]
gi|187766985|gb|EDU30829.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli O157:H7 str. EC4196]
gi|188013699|gb|EDU51821.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli O157:H7 str. EC4113]
gi|188998896|gb|EDU67882.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli O157:H7 str. EC4076]
gi|189354438|gb|EDU72857.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli O157:H7 str. EC4401]
gi|189361167|gb|EDU79586.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli O157:H7 str. EC4486]
gi|189365044|gb|EDU83460.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli O157:H7 str. EC4501]
gi|189371216|gb|EDU89632.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli O157:H7 str. EC869]
gi|189375366|gb|EDU93782.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli O157:H7 str. EC508]
gi|208728655|gb|EDZ78256.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli O157:H7 str. EC4206]
gi|208731769|gb|EDZ80457.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli O157:H7 str. EC4045]
gi|208737614|gb|EDZ85297.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli O157:H7 str. EC4042]
gi|209157262|gb|ACI34695.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli O157:H7 str. EC4115]
gi|209775138|gb|ACI85881.1| putative ATP-binding component of a transport system [Escherichia
coli]
gi|209775140|gb|ACI85882.1| putative ATP-binding component of a transport system [Escherichia
coli]
gi|209775142|gb|ACI85883.1| putative ATP-binding component of a transport system [Escherichia
coli]
gi|209775144|gb|ACI85884.1| putative ATP-binding component of a transport system [Escherichia
coli]
gi|209775146|gb|ACI85885.1| putative ATP-binding component of a transport system [Escherichia
coli]
gi|217322835|gb|EEC31259.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli O157:H7 str. TW14588]
gi|254591480|gb|ACT70841.1| putative ATP-binding component of a transport system [Escherichia
coli O157:H7 str. TW14359]
gi|290761756|gb|ADD55717.1| Macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli O55:H7 str. CB9615]
gi|320192635|gb|EFW67276.1| Macrolide export ATP-binding/permease protein MacB [Escherichia
coli O157:H7 str. EC1212]
gi|320637750|gb|EFX07542.1| macrolide transporter ATP-binding /permease protein [Escherichia
coli O157:H7 str. G5101]
gi|320642873|gb|EFX12074.1| macrolide transporter ATP-binding /permease protein [Escherichia
coli O157:H- str. 493-89]
gi|320648330|gb|EFX16985.1| macrolide transporter ATP-binding /permease protein [Escherichia
coli O157:H- str. H 2687]
gi|320654168|gb|EFX22236.1| macrolide transporter ATP-binding /permease protein [Escherichia
coli O55:H7 str. 3256-97 TW 07815]
gi|320659792|gb|EFX27348.1| macrolide transporter ATP-binding /permease protein [Escherichia
coli O55:H7 str. USDA 5905]
gi|320664262|gb|EFX31413.1| macrolide transporter ATP-binding /permease protein [Escherichia
coli O157:H7 str. LSU-61]
gi|326338226|gb|EGD62055.1| Macrolide export ATP-binding/permease protein MacB [Escherichia
coli O157:H7 str. 1125]
gi|326346203|gb|EGD69941.1| Macrolide export ATP-binding/permease protein MacB [Escherichia
coli O157:H7 str. 1044]
Length = 648
Score = 37.8 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|193071765|ref|ZP_03052661.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli E110019]
gi|256021000|ref|ZP_05434865.1| macrolide transporter ATP-binding /permease protein [Shigella sp.
D9]
gi|192954922|gb|EDV85429.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli E110019]
gi|324116093|gb|EGC10017.1| ABC transporter [Escherichia coli E1167]
gi|332104578|gb|EGJ07924.1| macrolide transporter ATP-binding/permease [Shigella sp. D9]
Length = 648
Score = 37.8 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|187733708|ref|YP_001880923.1| macrolide transporter ATP-binding /permease [Shigella boydii CDC
3083-94]
gi|187430700|gb|ACD09974.1| macrolide-specific ABC-type efflux carrier protein MacB [Shigella
boydii CDC 3083-94]
Length = 648
Score = 37.8 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|310779038|ref|YP_003967371.1| protein of unknown function DUF214 [Ilyobacter polytropus DSM 2926]
gi|309748361|gb|ADO83023.1| protein of unknown function DUF214 [Ilyobacter polytropus DSM 2926]
Length = 397
Score = 37.8 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 32/251 (12%), Positives = 82/251 (32%), Gaps = 11/251 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ + +R +F +K +++ + I +G+ I+ + +G + + +
Sbjct: 3 LKMIFRNIFRYKKRTVLTLITMI------VGIYLAILGEGLNSGLENQITDIYIKTDTSY 56
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
++ + I ++ KV + + + L GS + F
Sbjct: 57 YKIYGKDFYLEKEDNDQLDYPIDNLDKVEKILKNKDYSKRLLFEGSITDGEEELRAQFIG 116
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
++ + G V L L ++ K+ I + +
Sbjct: 117 VEPHKENLVFKRNRYMVDGSFVDNENSLVLGLEMARLLKLGIGDEVTLIARTASQSINAY 176
Query: 189 Y-TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVF--VKDPDAIEKTHENIV 245
+ G+ + D+ V++ L AQ + + V+ I V + D + +E + +
Sbjct: 177 SLVITGIIKTGNTIMDSSCVFIDLNFAQKFADTP-FVNDIAVKTLLTD-EEVESLKKLQI 234
Query: 246 RILGNGVVVID 256
+ + D
Sbjct: 235 DFIPWQEEIKD 245
>gi|281178014|dbj|BAI54344.1| putative ABC transporter ATP-binding component [Escherichia coli
SE15]
Length = 648
Score = 37.8 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|227537333|ref|ZP_03967382.1| ABC superfamily ATP binding cassette transporter efflux protein
[Sphingobacterium spiritivorum ATCC 33300]
gi|227242836|gb|EEI92851.1| ABC superfamily ATP binding cassette transporter efflux protein
[Sphingobacterium spiritivorum ATCC 33300]
Length = 415
Score = 37.8 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 33/88 (37%), Gaps = 6/88 (6%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
A L N+ F +S +GV IG+M +I V S ++ R ++ + V I
Sbjct: 11 SFGFAISALRDNKTRTF------LSLLGVTIGIMTIIGVFSAVDTLRNNLEESVRKIGSS 64
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIK 95
+ K+ F + P+
Sbjct: 65 TLYVDKWPWDGGPDFPWWKYINRPEPKY 92
>gi|227884155|ref|ZP_04001960.1| macrolide-specific ABC family efflux carrier protein MacB
[Escherichia coli 83972]
gi|300978662|ref|ZP_07174352.1| ABC transporter, ATP-binding protein [Escherichia coli MS 45-1]
gi|301051192|ref|ZP_07198021.1| ABC transporter, ATP-binding protein [Escherichia coli MS 185-1]
gi|331646147|ref|ZP_08347250.1| macrolide export ATP-binding/permease protein MacB 1 [Escherichia
coli M605]
gi|222032608|emb|CAP75347.1| Macrolide export ATP-binding/permease protein macB [Escherichia
coli LF82]
gi|227838907|gb|EEJ49373.1| macrolide-specific ABC family efflux carrier protein MacB
[Escherichia coli 83972]
gi|300297099|gb|EFJ53484.1| ABC transporter, ATP-binding protein [Escherichia coli MS 185-1]
gi|300409594|gb|EFJ93132.1| ABC transporter, ATP-binding protein [Escherichia coli MS 45-1]
gi|307552722|gb|ADN45497.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli ABU 83972]
gi|312945397|gb|ADR26224.1| macrolide transporter ATP-binding /permease protein [Escherichia
coli O83:H1 str. NRG 857C]
gi|320196626|gb|EFW71249.1| Macrolide export ATP-binding/permease protein MacB [Escherichia
coli WV_060327]
gi|330910661|gb|EGH39171.1| macrolide export ATP-binding/permease protein MacB [Escherichia
coli AA86]
gi|331044899|gb|EGI17026.1| macrolide export ATP-binding/permease protein MacB 1 [Escherichia
coli M605]
Length = 648
Score = 37.8 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|91209915|ref|YP_539901.1| macrolide transporter ATP-binding /permease [Escherichia coli
UTI89]
gi|117623058|ref|YP_851971.1| macrolide transporter ATP-binding /permease protein [Escherichia
coli APEC O1]
gi|218557783|ref|YP_002390696.1| macrolide transporter ATP-binding /permease protein [Escherichia
coli S88]
gi|218688661|ref|YP_002396873.1| macrolide transporter ATP-binding /permease [Escherichia coli ED1a]
gi|237707155|ref|ZP_04537636.1| macrolide-specific ABC-type efflux carrier [Escherichia sp.
3_2_53FAA]
gi|122064322|sp|Q1RE44|MACB_ECOUT RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|145566777|sp|A1A9B7|MACB1_ECOK1 RecName: Full=Macrolide export ATP-binding/permease protein MacB 1
gi|91071489|gb|ABE06370.1| macrolide-specific ABC-type efflux carrier [Escherichia coli UTI89]
gi|115512182|gb|ABJ00257.1| macrolide-specific ABC-type efflux carrier [Escherichia coli APEC
O1]
gi|218364552|emb|CAR02236.1| fused macrolide transporter subunits of ABC superfamily:
ATP-binding component ; membrane component [Escherichia
coli S88]
gi|218426225|emb|CAR07050.1| fused macrolide transporter subunits of ABC superfamily:
ATP-binding component ; membrane component [Escherichia
coli ED1a]
gi|226898365|gb|EEH84624.1| macrolide-specific ABC-type efflux carrier [Escherichia sp.
3_2_53FAA]
gi|294492439|gb|ADE91195.1| macrolide-specific ABC-type efflux carrier protein MacB
[Escherichia coli IHE3034]
gi|307627711|gb|ADN72015.1| macrolide transporter ATP-binding /permease protein [Escherichia
coli UM146]
gi|315287287|gb|EFU46698.1| ABC transporter, ATP-binding protein [Escherichia coli MS 110-3]
gi|323953417|gb|EGB49283.1| ABC transporter [Escherichia coli H252]
gi|323958168|gb|EGB53877.1| ABC transporter [Escherichia coli H263]
gi|324009753|gb|EGB78972.1| ABC transporter, ATP-binding protein [Escherichia coli MS 57-2]
Length = 648
Score = 37.8 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|21673217|ref|NP_661282.1| ABC transporter, ATP-binding protein [Chlorobium tepidum TLS]
gi|81860127|sp|Q8KFE9|MACB_CHLTE RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|21646300|gb|AAM71624.1| ABC transporter, ATP-binding protein [Chlorobium tepidum TLS]
Length = 651
Score = 37.8 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
A++ + SN+ F +S +G+++GV ++I +M++ G + M +++ + +
Sbjct: 257 AFQSIASNKIRTF------LSVLGILVGVASVIAMMALGTGAKASMEEQLKSMGSN 306
>gi|306812671|ref|ZP_07446864.1| macrolide transporter ATP-binding /permease protein [Escherichia
coli NC101]
gi|331682388|ref|ZP_08383007.1| macrolide export ATP-binding/permease protein MacB 1 [Escherichia
coli H299]
gi|305853434|gb|EFM53873.1| macrolide transporter ATP-binding /permease protein [Escherichia
coli NC101]
gi|331080019|gb|EGI51198.1| macrolide export ATP-binding/permease protein MacB 1 [Escherichia
coli H299]
Length = 648
Score = 37.8 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|255012588|ref|ZP_05284714.1| ABC transporter, permease protein, putative [Bacteroides sp. 2_1_7]
gi|256838973|ref|ZP_05544483.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|298374520|ref|ZP_06984478.1| ABC transporter permease [Bacteroides sp. 3_1_19]
gi|256739892|gb|EEU53216.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|298268888|gb|EFI10543.1| ABC transporter permease [Bacteroides sp. 3_1_19]
Length = 418
Score = 37.8 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 35/236 (14%), Positives = 73/236 (30%), Gaps = 10/236 (4%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQ---FIAN 85
S ++ GV G++ L++++ +GF+ M K V G + + YQ N
Sbjct: 21 SLMTCFGVFWGILMLVLLLGTGSGFKNAMFKSVNGFATNSLFFYADRTSEPYQGFNKGRN 80
Query: 86 RLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFD 145
D+ ++ V +S + G ++ Y N+
Sbjct: 81 WNMRNRDIDAIIRDVPSVQDISPILWGSRSEKNIVYGIMTGTFNVKGIYPAYFNIDTQDL 140
Query: 146 RGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNG 205
++ D+ + + + + P G IR + +
Sbjct: 141 YYGRLLNEIDMREKRKVCLIGTKINEVLFHNEDPCGKYIRVNGLYYQVVGVVNQRASGLN 200
Query: 206 -------MVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVV 254
V++ Q N + + + + VK IE T E + I+ +
Sbjct: 201 LGGRGEETVFIPFNTMQQTLNQGDILHFLALSVKPGYPIETTIEQVKNIMKTQNQI 256
>gi|224537708|ref|ZP_03678247.1| hypothetical protein BACCELL_02590 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520684|gb|EEF89789.1| hypothetical protein BACCELL_02590 [Bacteroides cellulosilyticus
DSM 14838]
Length = 419
Score = 37.8 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 26/225 (11%), Positives = 60/225 (26%), Gaps = 8/225 (3%)
Query: 20 RKNAFISIASFISFIGVMIGVMALIVVMSVMNGFRE--DMIKRVLGINGHVVIQQKYYPL 77
++N + + + V G+ LIV++ NG + +N +
Sbjct: 13 KRNKLRTFLTGFA---VAWGIFMLIVLLGAGNGIIHAFEQSSSERALNSIRIFPGWTSKP 69
Query: 78 VDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFY 137
R+ + ++ +S ++ + + Y
Sbjct: 70 YAGLKEGRRVRLENNDLEATEKYFPDYVISAGATVRQSNVNVSFGQEYVNISLMGVHPNY 129
Query: 138 GNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY---TVLGM 194
V + DL + + K +G +G + +
Sbjct: 130 TEVETVKTADGRFVNQNDLKERRKVIVIHKKTADILFGKTHTEPIGQFVNASGVAYQVVG 189
Query: 195 FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
D + Y+ Q +N ++ I K+ + IE
Sbjct: 190 IYNDQGDREASEAYIPFSTLQTIYNKGEQLNNIIFTTKNLETIES 234
>gi|161598636|ref|YP_001573851.1| putative ABC-transporter permease protein [Bacillus thuringiensis
serovar israelensis]
gi|21685503|emb|CAD30167.1| putative ABC-transporter permease protein [Bacillus thuringiensis
serovar israelensis]
Length = 399
Score = 37.8 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 21/246 (8%), Positives = 76/246 (30%), Gaps = 10/246 (4%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A + +++ S ++ +G++IGV ++I V+++ G + + +G
Sbjct: 6 SIKIALSSILAHKLR------SALTMLGIIIGVGSIITVVAIGQGGEAALKSQFVGSGNQ 59
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
V + D + + +++ S + +
Sbjct: 60 TVPIHYSPDINDPFGMDMAEAPKITEEDIFELKKIPEIAHIVTTNSSMESLDIEDKKEMV 119
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVI---IGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + ++ +G+ + + + + + + +
Sbjct: 120 NITGLDNEYFTVNKVKVLKGRSLQESDVDQGNNVVMISKQMKEKVFKDANPVGKIIEVKG 179
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + +F + + + ++ + I V K+ D +E+ +
Sbjct: 180 QPMQIIGVYKSDNKFMGMGPSEALVPISLWPTLYG-KDEIQNISVQAKNVDHLEQAGKKA 238
Query: 245 VRILGN 250
+L +
Sbjct: 239 ADVLNS 244
>gi|56750336|ref|YP_171037.1| ABC transporter permease [Synechococcus elongatus PCC 6301]
gi|56685295|dbj|BAD78517.1| ABC transporter permease protein [Synechococcus elongatus PCC 6301]
Length = 392
Score = 37.8 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 33/251 (13%), Positives = 76/251 (30%), Gaps = 13/251 (5%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+AWR L R +++ + ISF G ++M + GFR+ + ++ ++ +
Sbjct: 15 LAWRQLARQRVRLLVAL-AGISFAG---------LLMFMQMGFRDGLFDSIVTLHEAIAA 64
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
+ R + + L Q+ + L
Sbjct: 65 DVVLISPQSTALTSMRPFPQRRLYQALSLSDVQSVSPLYVGLVNWKNPENRQPRSILTLG 124
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
S ++ + + I + S + + + + + +
Sbjct: 125 ISPDEAAFDLKGLPENLNAIRIPD-VVLFDQTSRSEFGPVAQRFRSGQSVVTEVGERRIR 183
Query: 191 VLGMFRMRFPDYDNGMVYMSLQEAQLYF--NLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
V G+F M +G + S F + + + + I + + + R L
Sbjct: 184 VGGLFTMGASFGADGNIITSDLNFLRIFPQRRRDEIDVGLIRAEPGTNIAQLVQELQRSL 243
Query: 249 GNGVVVIDWQQ 259
V V+ +Q
Sbjct: 244 PPDVRVMSKRQ 254
>gi|326798629|ref|YP_004316448.1| hypothetical protein Sph21_1209 [Sphingobacterium sp. 21]
gi|326549393|gb|ADZ77778.1| protein of unknown function DUF214 [Sphingobacterium sp. 21]
Length = 793
Score = 37.8 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 10/42 (23%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALI 44
+F + + +AWR L ++ N I+I + + + A I
Sbjct: 1 MFKNY-IKIAWRNLRKHKFNTAINILGLACGLSFALLIGAFI 41
>gi|229584994|ref|YP_002843496.1| hypothetical protein M1627_1569 [Sulfolobus islandicus M.16.27]
gi|228020044|gb|ACP55451.1| protein of unknown function DUF214 [Sulfolobus islandicus M.16.27]
Length = 421
Score = 37.8 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A++ L S + S ++ I VMIGV ++ V+++ G + ++ V + +
Sbjct: 8 FWLAYKGLVSRKA------ISILAIISVMIGVASVTVLVAFTQGVSQSILSVVESLGSNT 61
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFV 100
++ Q + +P + V P +
Sbjct: 62 ILVLPRGGASLTQATVATIASLPVIKAVYPVI 93
>gi|315301452|ref|ZP_07872615.1| ABC transporter, permease protein [Listeria ivanovii FSL F6-596]
gi|313630173|gb|EFR98143.1| ABC transporter, permease protein [Listeria ivanovii FSL F6-596]
Length = 274
Score = 37.8 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 33/254 (12%), Positives = 83/254 (32%), Gaps = 20/254 (7%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M I +A + L S + F ++ +G++IGV ++I+++++ +++ +
Sbjct: 1 MKIHQNV--KLALKQLGSFKFRTF------LTMLGIIIGVFSVILLVTIGEAISKNVSTQ 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + ++V +F + ++ Q V S + V G
Sbjct: 53 LGDMGSNLVSVNFLPSSSTDKFTYREATSLLTDDEMGSPEVTQTKVVRNSEHIEEMQVTG 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
I+ + D + + V + + I
Sbjct: 113 INEDYSDMKNVELAAGRFCSEVDINYAQKVTV-------IDSDIAKTYFKERNPVGEYIR 165
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKD----PDA 236
G+R VL +++ + A+ F ++++ + KD P
Sbjct: 166 VSGVRYLIIGVLQEKGESLFSSTGKQLFIPITSAERLF-KTDSINLYYIQAKDAKAVPGV 224
Query: 237 IEKTHENIVRILGN 250
+ + N+ ++ N
Sbjct: 225 VNRVKRNMSQLFPN 238
>gi|317132813|ref|YP_004092127.1| protein of unknown function DUF214 [Ethanoligenens harbinense
YUAN-3]
gi|315470792|gb|ADU27396.1| protein of unknown function DUF214 [Ethanoligenens harbinense
YUAN-3]
Length = 870
Score = 37.8 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 29/71 (40%), Gaps = 11/71 (15%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++F ++ RY+ +K S ++ IG+ + V + +++ F+ I+
Sbjct: 1 MNMFG-----LSLRYMRMQKKR------SILTAIGITLAVALVAGTGMLISSFQNMQIQS 49
Query: 61 VLGINGHVVIQ 71
G Q
Sbjct: 50 ATASTGSWHYQ 60
>gi|254423234|ref|ZP_05036952.1| efflux ABC transporter, permease protein [Synechococcus sp. PCC
7335]
gi|196190723|gb|EDX85687.1| efflux ABC transporter, permease protein [Synechococcus sp. PCC
7335]
Length = 406
Score = 37.8 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A + L +N+ S ++ +G++IG ++I ++ + G ++ + ++ + +
Sbjct: 6 SLKMATKTLSANKLR------SGLTMLGIIIGNASVIAMIGIGEGAQKYVNGQLQTLGPN 59
Query: 68 VVI 70
V+
Sbjct: 60 VLF 62
>gi|171778244|ref|ZP_02919450.1| hypothetical protein STRINF_00290 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282944|gb|EDT48368.1| hypothetical protein STRINF_00290 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 176
Score = 37.8 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 46/137 (33%), Gaps = 6/137 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
A + ++ +F ++ +GV+IGV +++V+M++ G + + V
Sbjct: 4 WKFALSSIMGHKMRSF------LTTLGVIIGVASVVVIMALGQGMTNQVTNMFASDSQDV 57
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + + D + Q S L + L +++
Sbjct: 58 QLYYTTKKTDNIDVFDDTDPREADKGPAIKEEWLQKITSELQDVENYYLTNSTTSTVEGN 117
Query: 129 LQNSFSRFYGNVSNDFD 145
+ S + V+ +
Sbjct: 118 QKKSKNVNITGVNRTYF 134
>gi|152991414|ref|YP_001357136.1| peptide ABC transporter permease [Nitratiruptor sp. SB155-2]
gi|151423275|dbj|BAF70779.1| antimicrobial peptide ABC transporter, permease [Nitratiruptor sp.
SB155-2]
Length = 397
Score = 37.8 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 21/242 (8%), Positives = 66/242 (27%), Gaps = 9/242 (3%)
Query: 15 YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKY 74
+LF + + + +G+++G+ +L+ +++ + G + K + + ++ +
Sbjct: 12 FLFFYKGR------TLFALLGIVLGIASLVFIVAAIEGSQLKAKKIIDMLGSDTILIRSS 65
Query: 75 YPLVDYQFIANRLDFIPDVIKV--LPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNS 132
+ I + + + + + L
Sbjct: 66 FGSRVSFRHIPMKLDIHQYNLIKKIDGIKSLDYFYVKKVNVKRKNFGKKLLVEGFTLGTL 125
Query: 133 FSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVL 192
Y F K + + + +P G +G
Sbjct: 126 EHFGYRPKWGRFFLPKDFQNFSKVVVVGQDIVQEFFQGKNPLGKTLFIGKEPFRVIGVYQ 185
Query: 193 GMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHENIVRILGNG 251
+ + + + M + + + E + + V ++ +I IL
Sbjct: 186 KRGKSPRGNSMDERIMMPVSTYRKFIQHEYQKIFAMVAKVSRDADYKRVLNDIETILNKT 245
Query: 252 VV 253
+
Sbjct: 246 LK 247
>gi|315022534|gb|EFT35561.1| ABC transporter, permease protein [Riemerella anatipestifer RA-YM]
Length = 352
Score = 37.4 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 13/88 (14%), Positives = 34/88 (38%), Gaps = 1/88 (1%)
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN-AVSGIEVFVKDPDAIEKT 240
+ + V G+++ D+ + + + N++ A+ G+++F+KD I++
Sbjct: 124 QKPIYRKFKVKGIYKTDIKMIDDLFIIGDINHVRRIQNMDKTAIGGVDIFLKDMGEIDEV 183
Query: 241 HENIVRILGNGVVVIDWQQRYQIFFSCY 268
I +G +Y +
Sbjct: 184 FPKIEEKIGYKNYAEKITDKYPEIVNWI 211
>gi|229087473|ref|ZP_04219607.1| ABC transporter, permease component [Bacillus cereus Rock3-44]
gi|228695895|gb|EEL48746.1| ABC transporter, permease component [Bacillus cereus Rock3-44]
Length = 838
Score = 37.4 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 34/224 (15%), Positives = 67/224 (29%), Gaps = 17/224 (7%)
Query: 27 IASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANR 86
+ + + +GVM+ M L+ SV +E ++ R + ++ +
Sbjct: 2 LIALGAALGVMLATMLLLGNQSVEQSVKEQVVSRY--GDYNLQFGYIKNDMYLNNENLKE 59
Query: 87 LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDR 146
LD + + K+ + + G + +
Sbjct: 60 LDSLENAEKITKVLIPYPLPNHKELSGKPSYWGVEQD------SPDMHAYKVIEGRYPKE 113
Query: 147 GKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGM 206
G V + K I +GD I + P KS V+G+
Sbjct: 114 GAEVALTKGYTDRENIKVGDMIRLPFPPHGE---------KSVKVVGILNPPLMAAMGHS 164
Query: 207 VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN 250
Y + Q NL+ + ++V V D + + + L N
Sbjct: 165 AYFPIAWMQKELNLQGQFNLVQVKVSDVNGKTMIANDANKRLEN 208
>gi|196231802|ref|ZP_03130659.1| protein of unknown function DUF214 [Chthoniobacter flavus Ellin428]
gi|196224274|gb|EDY18787.1| protein of unknown function DUF214 [Chthoniobacter flavus Ellin428]
Length = 371
Score = 37.4 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 24/245 (9%), Positives = 72/245 (29%), Gaps = 28/245 (11%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ V R LF + ++ +G+ +G+ A++ ++ + GF + +
Sbjct: 4 LTVIIRGLFRRPVR------TGLTIVGIAVGIGAVVALVGMSRGFETSWTSGMKSRGTDI 57
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ L F + + I + V + L+ ++ + +
Sbjct: 58 DVSNMAGSLTPQPFSESVVPGIRQLPHVAE---------------TCSLMVDFTSIEKAD 102
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ +R +G + ++ L ++ + + +
Sbjct: 103 MMIVSAREWGGYTW----KNLKLVSGRLPKDAHEKVVVLGTLAAQILGKKVGDTLQLETE 158
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH---ENIV 245
+ +N V +SL Q + ++ + + E+ + I
Sbjct: 159 ELPVVGVVDGGAMVENNSVILSLPLYQELTGNQGKINVLNIRATPGTTKEEISDLCQRIQ 218
Query: 246 RILGN 250
++
Sbjct: 219 SLVPQ 223
>gi|94265215|ref|ZP_01288976.1| Protein of unknown function DUF214 [delta proteobacterium MLMS-1]
gi|93454305|gb|EAT04615.1| Protein of unknown function DUF214 [delta proteobacterium MLMS-1]
Length = 412
Score = 37.4 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 33/249 (13%), Positives = 70/249 (28%), Gaps = 22/249 (8%)
Query: 36 VMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIK 95
+ IGV+ +++ ++V F+ MI + + K + + + L +
Sbjct: 26 IAIGVIFVLLFVAVTGSFKNLMIAQTTDSMLGHLQVHKRGYVASIENLPLNL---NLSGE 82
Query: 96 VLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRG-------- 147
L V + S L G S F N
Sbjct: 83 ALNRVEEMLDRRPEVANFSARLKFGAMFSTFVETTNIRLNGIDPERELATVPLLAGRLLE 142
Query: 148 -KGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGM 206
+ + L ++ G + + V G + +G
Sbjct: 143 GEPELTPGQLWVPELLARGMGVAMGDTVVVVATNQDGSVNGRQLTVGGILESATGPGGRD 202
Query: 207 VYMSLQEAQLYFNLEN-AVSGIEVFVKDPDAIEKTHENIVRILGNG--------VVVIDW 257
Y+ + +A LE +S I V + + D + + + L + W
Sbjct: 203 GYLHIDDAAAILRLEKREISEIAVRLDNFDHLPAVAAALEQELAPHTTPQGRPLYELHTW 262
Query: 258 QQRYQIFFS 266
++ F++
Sbjct: 263 ERL-SPFYN 270
>gi|116625537|ref|YP_827693.1| hypothetical protein Acid_6484 [Candidatus Solibacter usitatus
Ellin6076]
gi|116228699|gb|ABJ87408.1| protein of unknown function DUF214 [Candidatus Solibacter
usitatus Ellin6076]
Length = 417
Score = 37.4 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 10/52 (19%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
LF+++ S ++ +G++ GV A++ ++S+ G +++M+ + + +
Sbjct: 17 LFAHKLR------SLLTMLGMIFGVGAVVAMLSITAGAQKEMMSFIDQLGVN 62
>gi|307706347|ref|ZP_07643159.1| permease family protein [Streptococcus mitis SK321]
gi|307618265|gb|EFN97420.1| permease family protein [Streptococcus mitis SK321]
Length = 419
Score = 37.4 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ A+ + +++ +F ++ IG++IGV +++V+M++ + + K + ++
Sbjct: 4 LKFAFSSIMAHKMRSF------LTMIGIIIGVSSVVVIMALGDSMSRQINKNMTKSQKNI 57
Query: 69 VIQQ 72
+
Sbjct: 58 HVFF 61
>gi|239626814|ref|ZP_04669845.1| conserved hypothetical protein [Clostridiales bacterium
1_7_47_FAA]
gi|239516960|gb|EEQ56826.1| conserved hypothetical protein [Clostridiales bacterium
1_7_47FAA]
Length = 458
Score = 37.4 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ ++ + + + L ++ F ++ +GV+IG ++++++S+ G +E +
Sbjct: 1 MKTKDLLTICIQNLTRHKSRTF------LTVLGVIIGCCSVVIMISIGIGMKEAQKNMLA 54
Query: 63 GING 66
+
Sbjct: 55 QMGD 58
>gi|53711850|ref|YP_097842.1| putative ABC transporter ATP-binding protein [Bacteroides fragilis
YCH46]
gi|253564096|ref|ZP_04841553.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|265765216|ref|ZP_06093491.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|52214715|dbj|BAD47308.1| putative ABC transporter ATP-binding protein [Bacteroides fragilis
YCH46]
gi|251947872|gb|EES88154.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|263254600|gb|EEZ26034.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
Length = 414
Score = 37.4 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 29/235 (12%), Positives = 60/235 (25%), Gaps = 8/235 (3%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFRE----DMIKRVLGINGHVVIQQKYYPLVDYQFIA 84
S ++ GV G+ L+ +M G +E + + +
Sbjct: 22 SLLTAFGVFWGIFMLVALMGGGQGMQEMMQAEFEGFATNSGFMASQKTGEAYKGFRKGRY 81
Query: 85 NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDF 144
++ ++ GS + N +
Sbjct: 82 WDIENADIERIRKKVKDIDVITPSIARWGSTAIYGEKKYDCSVKGLYPDYAKIENQDMAY 141
Query: 145 DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDN 204
R + ++ + I ++ +P D + + Y V+GM
Sbjct: 142 GRFINDVDVREGRKVCVIGKRVYESLFNPGEDPCGKYVRVDGIYYQVIGMCVSEGNMNIQ 201
Query: 205 GM----VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVI 255
G V + Q +N+ + I VK + I IL +
Sbjct: 202 GRASEAVVLPFSTMQQAYNMGKRIDVICYTVKPGKKVSDLEPEIEAILKEAHYIS 256
>gi|210620879|ref|ZP_03292296.1| hypothetical protein CLOHIR_00239 [Clostridium hiranonis DSM 13275]
gi|210155091|gb|EEA86097.1| hypothetical protein CLOHIR_00239 [Clostridium hiranonis DSM 13275]
Length = 1084
Score = 37.4 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 39/243 (16%), Positives = 77/243 (31%), Gaps = 23/243 (9%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
F V R +F +K ++ +G+ G ALI+ + + ++ G
Sbjct: 706 FIWKVTLRNIFRYKKRF------LMTVLGIS-GCTALILTGFGVRDSIQMIVDVQFGELN 758
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
+ Y + + I + V + + V + +
Sbjct: 759 KYSMTASYDSDEKTENVEYLKSLISNEKGVKEIGMFHNQNAKVMINNKEKEVTVVIPENK 818
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ + N KG++I + ARNL +GDK+ IL+ + +
Sbjct: 819 NTFDDFIVLRDRQSHNPIKLDKGIVISEKAARNLDAKVGDKVKILNENDVSAEAVISGIT 878
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKD---PDAIEKTHEN 243
++Y N +YM+ + FN + I + D D +K
Sbjct: 879 ENY-------------VNHYIYMTNDYYKELFNRNADSNRIYGVLDDSITIDQEDKMASK 925
Query: 244 IVR 246
I+
Sbjct: 926 IID 928
>gi|311104140|ref|YP_003976993.1| macrolide export ATP-binding/permease MacB [Achromobacter
xylosoxidans A8]
gi|310758829|gb|ADP14278.1| macrolide export ATP-binding/permease protein MacB [Achromobacter
xylosoxidans A8]
Length = 652
Score = 37.4 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 30/233 (12%), Positives = 70/233 (30%), Gaps = 2/233 (0%)
Query: 26 SIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIAN 85
+ + ++ +G++IG+ A++ V+++ G R ++ + I + V D + +
Sbjct: 272 RLRTSLTMLGIIIGIAAVVSVVALGEGSRRKILDDISEIGTNTVEIFPGKDFGDEKAVNI 331
Query: 86 RLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFD 145
R D + + +S+ + N + + R
Sbjct: 332 RTLVPADADALARESYVDSVTPEVSTSNTLRYRNVSVNGVIQGVGEQYFRVRAIKLAQGK 391
Query: 146 RGKGVIIGKDLARNLGISIGDK--INILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYD 203
+ + + + + + ++ V F D
Sbjct: 392 FFDETSVLRRAQEVVIDDATRRKLFGSHTEPIGQVVFLGSMPARVIGVTQKKDTVFGSND 451
Query: 204 NGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
V++ A + + I V V D + IVR+L V D
Sbjct: 452 TLNVWVPYTTALSRVLGQQHLKSITVRVNDASPPAAAEQAIVRVLTRRHVTKD 504
>gi|159035896|ref|YP_001535149.1| hypothetical protein Sare_0223 [Salinispora arenicola CNS-205]
gi|157914731|gb|ABV96158.1| protein of unknown function DUF214 [Salinispora arenicola
CNS-205]
Length = 401
Score = 37.4 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 25/36 (69%)
Query: 17 FSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNG 52
F+ + A + S ++ +G++IGV A+I++++V NG
Sbjct: 9 FAGQGVAGNKLRSALTMLGILIGVAAVILLVAVGNG 44
>gi|291535235|emb|CBL08347.1| ABC-type transport system, involved in lipoprotein release,
permease component [Roseburia intestinalis M50/1]
Length = 407
Score = 37.4 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 36/262 (13%), Positives = 85/262 (32%), Gaps = 12/262 (4%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGV-MALIVVMSVMNGFREDMIK 59
M + + +RYL + + + I +++G M L +E
Sbjct: 1 MKFYQ-----LGFRYLQRKKGKTILLLIVLILVNSMILGTSMILRTTNESKQAMQEKTNS 55
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
+++ + + + + + + + S+ + +
Sbjct: 56 KIVAEITSKDSKITENEVNKIETLEDVSSINRIGRQEVFPNDFAPVTLNTSTNEENLKIA 115
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDF--DRGKGVIIGKDLARNLGISIGDKINI---LSPY 174
+S D Y S D+ KG +I +LA G+ +GD I +
Sbjct: 116 LLSYDDLEKDSPFSEMQYRLASGDYIKHEKKGAVINANLANQNGLKVGDTIELGTENGTK 175
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
V +G+ + + + + + V++ + F E + V+ K P
Sbjct: 176 VSVQIIGIFMSAGNAEKDQPSKTTAVNRIENQVFIDNSTYKELF-KEAEFEKLCVYSKRP 234
Query: 235 DAIEKTHENIVRILGNGVVVID 256
+ ++ ++ +I GN V +
Sbjct: 235 EKLDVLETSLQKIFGNDVALST 256
>gi|13472086|ref|NP_103653.1| Na/H antiporter [Mesorhizobium loti MAFF303099]
gi|14022831|dbj|BAB49439.1| Na/H antiporter [Mesorhizobium loti MAFF303099]
Length = 737
Score = 37.4 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 3 IFSRFEVIVAWRYLF---SNRKNAFISIASFISFIGVMIGVMALIVVM 47
+F F + R +F ++F S + I+ I +++GVMALI +
Sbjct: 214 LFMAFSFTIGRRLVFTLIRWSNDSFRSEYAVITVILIIMGVMALITNL 261
>gi|284039457|ref|YP_003389387.1| hypothetical protein Slin_4610 [Spirosoma linguale DSM 74]
gi|283818750|gb|ADB40588.1| protein of unknown function DUF214 [Spirosoma linguale DSM 74]
Length = 798
Score = 37.4 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 23/46 (50%), Gaps = 8/46 (17%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVM-ALIVVM 47
+F + + +A R L S R ++ +G+ IG+ AL++ +
Sbjct: 1 MFQSY-LKIALRNLRSQRSYTLLN------ILGLSIGMAGALLIFL 39
>gi|125624275|ref|YP_001032758.1| ABC transporter permease [Lactococcus lactis subsp. cremoris
MG1363]
gi|124493083|emb|CAL98047.1| Putative ABC transporter permease protein [Lactococcus lactis
subsp. cremoris MG1363]
gi|300071056|gb|ADJ60456.1| ABC transporter permease [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 893
Score = 37.4 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 34/245 (13%), Positives = 74/245 (30%), Gaps = 20/245 (8%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F V R LF +K ++ GV G AL+V+ GF + + G+
Sbjct: 512 MSFTYKVTARNLFRYKKRM------LMTIFGVA-GCTALLVM-----GF--GIRDSISGL 557
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
Q +Y ++ + + K L + ++ + +
Sbjct: 558 ASKQFGQILHYDMIAIEKNKVSDKEKEAINKKLNSSEIENYLPIAFENLTKEASGKLEKQ 617
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ S + + S + R I N ++ + V
Sbjct: 618 EVSLIATNQSDDLSKYVSLESRKNNQKI----VLNDSGAVISEKFAELLGLKVGDSLTLK 673
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKD--PDAIEKTHE 242
++ V Y ++M+ Q F + +G + +K+ + I+K
Sbjct: 674 DDENKPVRIKVSAITEMYMGHYIFMNQSVYQKVFKKDFMTNGQLIKLKNDSVNNIQKMSA 733
Query: 243 NIVRI 247
+++
Sbjct: 734 QLMQE 738
>gi|294629765|ref|ZP_06708325.1| ABC transporter integral membrane protein [Streptomyces sp. e14]
gi|292833098|gb|EFF91447.1| ABC transporter integral membrane protein [Streptomyces sp. e14]
Length = 846
Score = 37.4 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 25/249 (10%), Positives = 61/249 (24%), Gaps = 11/249 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F A R + +++ ++ + VM+GV + + N + K
Sbjct: 5 MFRT-----ALRNVLAHKARL------LMTVLAVMLGVAFVSGTLVFTNTISDAFQKSSA 53
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
HV + + + + + A + G L
Sbjct: 54 KGFDHVDVAVEAKYRKSEGDRVGKTPELTQDMLERSARVPGAKSAIGVVRGFTALAGKDG 113
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ Q+ ++G + G + + +
Sbjct: 114 KLIGNGFQSEGGNYWGAKDPRYPLVSGTAPHGAHQILIDSETARRAGYKVGDTVRVSVDG 173
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + + + + + AQ F I+V K +
Sbjct: 174 PVLTPTVSGVFTTDDGNVAAGGSLALFDTATAQKLFGKPGTYDEIDVAAKPGTSQSALKA 233
Query: 243 NIVRILGNG 251
+ R + G
Sbjct: 234 QLDRAMPKG 242
>gi|227827723|ref|YP_002829503.1| hypothetical protein M1425_1454 [Sulfolobus islandicus M.14.25]
gi|238619895|ref|YP_002914721.1| protein of unknown function DUF214 [Sulfolobus islandicus M.16.4]
gi|227459519|gb|ACP38205.1| protein of unknown function DUF214 [Sulfolobus islandicus M.14.25]
gi|238380965|gb|ACR42053.1| protein of unknown function DUF214 [Sulfolobus islandicus M.16.4]
Length = 421
Score = 37.4 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A++ L S + S ++ I VMIGV ++ V+++ G + ++ V + +
Sbjct: 8 FWLAYKGLVSRKA------ISILAIISVMIGVASVTVLVAFTQGVSQSILSVVESLGSNT 61
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFV 100
++ Q + +P + V P +
Sbjct: 62 ILVLPRGGASLTQATVATIASLPVIKAVYPVI 93
>gi|124008789|ref|ZP_01693478.1| putative ABC transporter ATP-binding protein [Microscilla marina
ATCC 23134]
gi|123985702|gb|EAY25582.1| putative ABC transporter ATP-binding protein [Microscilla marina
ATCC 23134]
Length = 412
Score = 37.4 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 33/234 (14%), Positives = 65/234 (27%), Gaps = 8/234 (3%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMI-KRVLGINGHVVIQQKYYPLVDYQFIANRL 87
+ ++ GV G+ LIV++ GF+ + + N V ++ R+
Sbjct: 21 TALTAFGVFWGIFMLIVLLGAGRGFQNGVEGSFDVAKNAVFVWGRRTSEPFKGFQAGRRI 80
Query: 88 DFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRG 147
F D + + + V + G + S+ Y V
Sbjct: 81 QFTNDDAEAIRHTIPEIDVIAPRNQLRGDFTVNYKTKNASFEVRGEYPDYLKVRPAEMLT 140
Query: 148 KGVIIGKDLARNL-------GISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFP 200
+ +D+ + + ++P G + T+ G
Sbjct: 141 GRFVNERDIEKKRKVAVIGTRVQELLFEEGVNPLGKYIDIKGIPFKVVGTIKGKGDANDI 200
Query: 201 DYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVV 254
V +S Q FN N V K+ + I +L +
Sbjct: 201 KEAAERVIISNTALQQAFNQVNKVGFFAFTPKNGVPAVVIEKKIKALLSERHSI 254
>gi|159899125|ref|YP_001545372.1| hypothetical protein Haur_2606 [Herpetosiphon aurantiacus ATCC
23779]
gi|159892164|gb|ABX05244.1| protein of unknown function DUF214 [Herpetosiphon aurantiacus
ATCC 23779]
Length = 420
Score = 37.4 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+ AW L + + ++ +GV +G+ ++V++S+ G + + ++
Sbjct: 7 LRTAWSNLTRRKVR------TSLTSLGVTVGIFTIVVMLSLGVGVQRVIQQQF 53
>gi|313619302|gb|EFR91037.1| ABC transporter, permease protein [Listeria innocua FSL S4-378]
Length = 1027
Score = 37.4 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 33/257 (12%), Positives = 70/257 (27%), Gaps = 21/257 (8%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F V R LF ++ ++ +GV G ALI+ GF L
Sbjct: 647 MNFTSKVTARNLFRYKQRM------LMTVLGVA-GCTALILT-----GF-------GLRN 687
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + + +Y ++ Y + P K + S + + +
Sbjct: 688 SISDIAKMQYGQIMKYDAAVYQDMSAPPTAKETYDNLMEDSNIKSKLAMSQTNIDAVKSG 747
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + N D+ + +I +
Sbjct: 748 QSAQASSIIVPKNLNELPDYIVLRDRSSHTTEKLTDDGAIISEKLAKLFDIKPGDSITVK 807
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+K+ +Y +YM+ Q F+ + + + + +KD EK
Sbjct: 808 NAKNDKYKIKVSAITENYAMHYIYMTPTYYQQIFDEKPSYNLDLLMLKDTS--EKVETEF 865
Query: 245 VRILGNGVVVIDWQQRY 261
L + ++
Sbjct: 866 AEKLTDSKSILTITFSN 882
>gi|224539935|ref|ZP_03680474.1| hypothetical protein BACCELL_04847 [Bacteroides cellulosilyticus
DSM 14838]
gi|224518489|gb|EEF87594.1| hypothetical protein BACCELL_04847 [Bacteroides cellulosilyticus
DSM 14838]
Length = 792
Score = 37.4 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 24/245 (9%), Positives = 62/245 (25%), Gaps = 11/245 (4%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A+R L R S IS IG+ IG+ ++ F +
Sbjct: 6 LKIAYRNLLKYRTQ------SIISIIGLAIGLACF-----ALSTFWVQYEITYDDFHKDA 54
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + L + S + + G +++
Sbjct: 55 ERIYLVRMNDCHFGGHYSDFVPYALGNHLKTTYTEIEDFCASGQNTLFIKNGKQITEYPM 114
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
L + + + ++ L V + ++
Sbjct: 115 LMPDTTFIRMMDIKVLEGDNQFFLSTSPEKSGIAITEKAAQDLFGTTRVIGETITDNNRR 174
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
Y + + Y + + +NA + + +K ++ E + +
Sbjct: 175 YEYRISAIVSDWGEHSNFKYAFMGRTNNDTSWDNANYRMLIKIKPGTNVDVLLEKMNQHF 234
Query: 249 GNGVV 253
+ +
Sbjct: 235 PDELK 239
>gi|153206080|ref|ZP_01945343.1| ABC transporter, permease protein [Coxiella burnetii 'MSU Goat
Q177']
gi|212217783|ref|YP_002304570.1| export ABC transporter permease protein [Coxiella burnetii
CbuK_Q154]
gi|120577210|gb|EAX33834.1| ABC transporter, permease protein [Coxiella burnetii 'MSU Goat
Q177']
gi|212012045|gb|ACJ19425.1| export ABC transporter permease protein [Coxiella burnetii
CbuK_Q154]
Length = 397
Score = 37.4 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 23/253 (9%), Positives = 71/253 (28%), Gaps = 11/253 (4%)
Query: 5 SRFEVIV--AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
F + A R L S++ +F ++ +G+++G +++ +++ E + +
Sbjct: 1 MSFIRYIKAALRNLISSKLRSF------LAILGILVGTASVVALITSSQLATEHALDQFK 54
Query: 63 GINGHVVIQQKYYPLVDYQ---FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
+ +++ Q L IP + ++ A + L + +
Sbjct: 55 ELGTNLLAMDVQPRPGQQQTDVSQQITLAKIPQIKHASQQIALVAPYTSLFNTLYFEGKQ 114
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + + F + + I +P G
Sbjct: 115 TEGQVLGATAELAEIVKIQIDKGRFVSYLNRNSFFCVIGSDVGKDFLAKGIANPIGHQIS 174
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+G + + F D + + + + ++ + + I +
Sbjct: 175 IGKFVFTIIGVAKHWQPNWFLYADINKGAIIPLATSFFLSKDAQINNLLFRLVPDPDIAE 234
Query: 240 THENIVRILGNGV 252
+ +
Sbjct: 235 VQNALADKMSQLY 247
>gi|218437919|ref|YP_002376248.1| hypothetical protein PCC7424_0924 [Cyanothece sp. PCC 7424]
gi|218170647|gb|ACK69380.1| protein of unknown function DUF214 [Cyanothece sp. PCC 7424]
Length = 405
Score = 37.4 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M IF + +A L +N+ + ++ +G++IG +++ ++ + G ++ + +
Sbjct: 1 MDIFE--SLKIATSTLLANKLR------TGLTMLGIIIGNASVVTMIGLGQGAKQLALDQ 52
Query: 61 VLGINGHVVI 70
+ + +
Sbjct: 53 FSNLGPNTLF 62
>gi|194433107|ref|ZP_03065389.1| macrolide-specific ABC-type efflux carrier protein MacB [Shigella
dysenteriae 1012]
gi|194418604|gb|EDX34691.1| macrolide-specific ABC-type efflux carrier protein MacB [Shigella
dysenteriae 1012]
Length = 648
Score = 37.4 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLCLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|29347905|ref|NP_811408.1| ABC transporter permease [Bacteroides thetaiotaomicron VPI-5482]
gi|253572498|ref|ZP_04849900.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|298387846|ref|ZP_06997396.1| ABC transporter, putative permease [Bacteroides sp. 1_1_14]
gi|29339807|gb|AAO77602.1| ABC transporter, putative permease [Bacteroides thetaiotaomicron
VPI-5482]
gi|251837913|gb|EES66002.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|298259451|gb|EFI02325.1| ABC transporter, putative permease [Bacteroides sp. 1_1_14]
Length = 419
Score = 37.4 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 24/225 (10%), Positives = 62/225 (27%), Gaps = 8/225 (3%)
Query: 20 RKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVD 79
++N + + + V G+ LIV++ NG + + + +
Sbjct: 13 KRNKLRTFLTGFA---VAWGIFMLIVLLGAGNGLIHAFEQSASERAMNSIKIFPGWTSKS 69
Query: 80 YQ--FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFY 137
Y R+ + + ++ G + + + +
Sbjct: 70 YDGLKEGRRIRLDNKDLNTTNKNFPDHVIKAGATVYQGGVNLSFGPEYVNLNLSGVYPNH 129
Query: 138 GNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGM--- 194
V I D+ + + K + +G + V+
Sbjct: 130 TEVEVVKLFKGRFINEIDIKERRKVIVLHKKTAEILFDKTHTDPIGQFVNAGNVVYQVVG 189
Query: 195 FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
D + Y+ Q +N + ++ + + K+ + IE
Sbjct: 190 LYNDKGDSGDSDAYLPFTTLQTIYNKGDKLNNLIMTTKNLETIES 234
>gi|117921892|ref|YP_871084.1| ABC transporter-like protein [Shewanella sp. ANA-3]
gi|134048482|sp|A0L0V9|MACB_SHESA RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|117614224|gb|ABK49678.1| ABC transporter related [Shewanella sp. ANA-3]
Length = 656
Score = 37.4 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 30/250 (12%), Positives = 85/250 (34%), Gaps = 18/250 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A + ++R F ++ +G++IG+ +++ V+++ G + +++K + + +
Sbjct: 261 ALKMALLAMSTHRLRTF------LTMLGIIIGIASVVSVVALGEGSQREILKSISSMGTN 314
Query: 68 VVIQQKYYPLVDYQ---------FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
+ + D + AN L +P V V P + A V + + +
Sbjct: 315 TIDIRPGSGFGDRRSARVRTLTASDANALKNLPYVDSVTPSIGSSATVRYGNKAVTATVN 374
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
+ + + + +I ++ + L + ++
Sbjct: 375 GVGPEFFRVRGYELAQGQFWDDDSVNALAQDAVIDENTRKQLF---PNSSGAMNSAIGEV 431
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+ + V F + D V++ + + GI V + +
Sbjct: 432 IFLGDLPVRIIGVTQPKESAFGNSDALNVWVPYTTVSGRMVGKKYLDGITVRLDESVPSN 491
Query: 239 KTHENIVRIL 248
+ I+ +L
Sbjct: 492 AAEQGIISLL 501
>gi|332091165|gb|EGI96255.1| macrolide export ATP-binding/permease protein macB [Shigella
dysenteriae 155-74]
Length = 645
Score = 37.4 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 88/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 254 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 307
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 308 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLCLRYNNVDVAASAN 367
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 368 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 427
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 428 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 487
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 488 RLLSLRHGKKD-------FFTWNMDGVLKT 510
>gi|297568152|ref|YP_003689496.1| protein of unknown function DUF214 [Desulfurivibrio alkaliphilus
AHT2]
gi|296924067|gb|ADH84877.1| protein of unknown function DUF214 [Desulfurivibrio alkaliphilus
AHT2]
Length = 412
Score = 37.4 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 27/246 (10%), Positives = 69/246 (28%), Gaps = 16/246 (6%)
Query: 36 VMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFI-PDVI 94
+ IGV+ +++ ++V F+ MI + + K + + + L+ +
Sbjct: 26 IAIGVIFVLLFVAVTGSFKNLMIAQTTDSMLGHLQLHKRGYVASIENLPLNLNLSGEALN 85
Query: 95 KVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGK 154
+V ++ Q V SS + + N + +G+ +
Sbjct: 86 RVEEVLTRQPEVEAFSSRLKFGAMFSTFVETTNIRLNGIDPERELATVPLLKGRLLAGDP 145
Query: 155 DLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNG-----MVYM 209
+L + + + + Y+
Sbjct: 146 ELTPGRIWVPELLARGMGIKPGDAVVVVATNQDGSVNGRQLTVAGILESATGPGGRDGYL 205
Query: 210 SLQEAQLYFNLEN-AVSGIEVFVKDPDAIEKTHENIVRILGNG--------VVVIDWQQR 260
+ +A L +S I V + D + + + L + W++
Sbjct: 206 HIDDAAAILRLPQREISEIAVRLHDFNRLPAVAAALEEKLAPYTTPQERPLYELHTWERL 265
Query: 261 YQIFFS 266
F++
Sbjct: 266 -SPFYN 270
>gi|219723605|ref|YP_002477075.1| efflux ABC transporter, permease protein [Borrelia garinii PBr]
gi|219694336|gb|ACL34862.1| efflux ABC transporter, permease protein [Borrelia garinii PBr]
Length = 409
Score = 37.4 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 49/270 (18%), Positives = 96/270 (35%), Gaps = 21/270 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A+ +F + + + S ++ L+V + MN RE M K + GH+
Sbjct: 2 FKLAFYNIFRDLRRTILLSLLLSSS------MVFLLVFVGYMNFSREGMEKSFVSSTGHI 55
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSS-----------GGSGVL 117
I ++ Y + + N L I ++ ++ +
Sbjct: 56 QIAKENYFNPKFSSLKNELLLEEKDINLIRDEIVGYDELQSTNLIVNFDGLLGNSSTSNP 115
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
V + D + +S S G + G ++G +LA + GI + N
Sbjct: 116 VFAFAYEDPDIITSSLSLLEGEPIFNDSNGGEFLLGSNLAASFGIEKIMETNSDLTLMTN 175
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
+G G+ ++ V G+ + F DN +++ + F E I+VF+KD +
Sbjct: 176 -LLGRGLNFQNIKVAGIVKFPFSTADNIFAITTIKTLKDLFAFEGGAHVIQVFLKDNSTL 234
Query: 238 EKTHENI---VRILGNGVVVIDWQQRYQIF 264
E + + + G DW + F
Sbjct: 235 EAFKKKLDNFKKNKGIAFDYNDWFEINPYF 264
>gi|119513063|ref|ZP_01632118.1| DevC protein [Nodularia spumigena CCY9414]
gi|119462273|gb|EAW43255.1| DevC protein [Nodularia spumigena CCY9414]
Length = 385
Score = 37.4 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 27/259 (10%), Positives = 74/259 (28%), Gaps = 14/259 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F R ++ +AWR L + ++ G+ ++ + GF+ +
Sbjct: 1 MFKR-KIPLAWRQLMKQKGRF------IVALCGITFADFLML----MQFGFQSALYDSNT 49
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ + + + ++ G +
Sbjct: 50 RFHELLQADVVLVSRQAQNLGLLSSFPRRRLFQAANLSEVESVNPLYVRLGVWKSPQTKL 109
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ + + + N+ + + + L S G ++ + +
Sbjct: 110 DESILVIGFNPEKPAFNLPAVNQKLEQIKYPNTL-LFDRNSNGKYAQAIAQIYEGKSITT 168
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFN--LENAVSGIEVFVKDPDAIEKT 240
++ + + G++ + NG V S Q F+ V+ + +K
Sbjct: 169 ELQGRKVKIGGLYEVGASFVANGSVITSDQNYLRIFSGQQPGQVNLGLINLKLGSDANLV 228
Query: 241 HENIVRILGNGVVVIDWQQ 259
+ + L + V V Q+
Sbjct: 229 AKALQSYLNDDVQVFTSQE 247
>gi|122064308|sp|Q2EHL8|MACB_AGGAC RecName: Full=Macrolide export ATP-binding/permease protein MacB
Length = 644
Score = 37.4 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 30/253 (11%), Positives = 89/253 (35%), Gaps = 12/253 (4%)
Query: 4 FSRFEVIVAWRY----LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
FS+ +++ A+R + +++ S ++ +G++IG+ +++ V+++ NG ++ +++
Sbjct: 245 FSKDQLMEAFRMSVSAIVAHKMR------SLLTMLGIIIGITSVVSVVALGNGSQQKILE 298
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS-GVLV 118
+ GI + + D + + I D + Q+ SS G V
Sbjct: 299 NIRGIGTNTMTIFNGNGFGDRRSRHIQNLKISDANTLSKQSYIQSVTPNTSSSGILVVGN 358
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINI-LSPYGDV 177
+ ++++ + + G + + + K
Sbjct: 359 KSFTSANLYGIGEQYFDVEGLKLKQGRLLTEDDVDQSNQVVVLDESAKKAIFANENPLGK 418
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
T + + V+ ++ ++ +Y + + I V + D
Sbjct: 419 TVIFNKRPFRVIGVVSDQQLGGFPGNSLNLYSPYSTVLNKITGGSRIGSITVKISDDVNS 478
Query: 238 EKTHENIVRILGN 250
+++ +L +
Sbjct: 479 TVAEKSLTELLKS 491
>gi|331266177|ref|YP_004325807.1| ABC transporter membrane-spanning permease macrolide efflux,
putative [Streptococcus oralis Uo5]
gi|326682849|emb|CBZ00466.1| ABC transporter membrane-spanning permease macrolide efflux,
putative [Streptococcus oralis Uo5]
Length = 419
Score = 37.4 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ A+ + +++ +F ++ IG++IGV +++V+M++ + + K + +
Sbjct: 4 LKFAFSSIMAHKMRSF------LTMIGIIIGVSSVVVIMALGDSMSRQVNKNMTKSQKDI 57
Query: 69 VIQQ 72
+
Sbjct: 58 HVFF 61
>gi|226226548|ref|YP_002760654.1| hypothetical membrane protein [Gemmatimonas aurantiaca T-27]
gi|226089739|dbj|BAH38184.1| hypothetical membrane protein [Gemmatimonas aurantiaca T-27]
Length = 415
Score = 37.4 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 19/214 (8%), Positives = 54/214 (25%), Gaps = 7/214 (3%)
Query: 3 IFSRFE-VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+F E + +A + +N+ + ++ GV IGV ++ + + ++G R+ +
Sbjct: 1 MFVALEGIGMALDAIRANKVR------AGLTIAGVAIGVFVVVAMGATVHGIRQSFQSDL 54
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
++ + + + + L
Sbjct: 55 DEFGATSFQVRRRGVGFNSCDGTDDTCPDRRNPAITLDEWNTIRNMPDVETATAWLSGQT 114
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
S + + + G+ +R + I +
Sbjct: 115 SFDYKDRHVTNVGYDAQSTDWIKTDVADISPGRSFSRAEHDGAAQVVVINDTLKNRLFGD 174
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQ 215
K V G + ++ + +
Sbjct: 175 SDPIGKQIAVEGKQFTVIGVFHTKAGFLKSMDGR 208
>gi|324329199|gb|ADY24459.1| ABC transporter, permease protein [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 400
Score = 37.4 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 35/247 (14%), Positives = 93/247 (37%), Gaps = 11/247 (4%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A + +++ S ++ +G++IGV ++I V+++ G + + G G+
Sbjct: 6 SIKIALSSILAHKLR------SALTMLGIIIGVGSIITVVAIGQGGEAMLKSKFAGSGGN 59
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
++ ++ ++ +F + + + V VS + + G+ + +++ +
Sbjct: 60 NLMPIQFKADINDEFNMGGHEIPKLTEEDIMEVKQVKDVSHVITTNQGMEILDVNDKKAN 119
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
Y V+ + D+ + + + + DV P+G I K
Sbjct: 120 LNVIGLDNEYFAVNKVKVVKGRTLSESDITHANNVMMISTKTEETLFKDVNPVGQIIEMK 179
Query: 188 ----SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ F ++ + L + F +N + I + K+ D +E +
Sbjct: 180 GQPMQIVGVYTSDNEFMGFEMEEALIPLTLWPVLFGTDN-IQNIAIQAKNVDDLEAAGKQ 238
Query: 244 IVRILGN 250
V +L +
Sbjct: 239 AVDVLNS 245
>gi|322375422|ref|ZP_08049935.1| putative ABC transporter, permease protein [Streptococcus sp.
C300]
gi|321279685|gb|EFX56725.1| putative ABC transporter, permease protein [Streptococcus sp.
C300]
Length = 419
Score = 37.4 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ A+ + +++ +F ++ IG++IGV +++V+M++ + + K + +
Sbjct: 4 LKFAFSSIMAHKMRSF------LTMIGIIIGVSSVVVIMALGDSMSRQVNKNMTKSQKDI 57
Query: 69 VIQQ 72
+
Sbjct: 58 HVFF 61
>gi|91218322|ref|ZP_01255267.1| ABC transporter, permease protein [Psychroflexus torquis ATCC
700755]
gi|91183531|gb|EAS69929.1| ABC transporter, permease protein [Psychroflexus torquis ATCC
700755]
Length = 794
Score = 37.4 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 30/259 (11%), Positives = 76/259 (29%), Gaps = 26/259 (10%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + +AWR L +NR + S ++ +G+ IG+ + +V+ + +E +
Sbjct: 1 MIRSY-IKIAWRNLKTNR------LFSIVNIVGLSIGLASTLVLFLFI--LQERSFDNMY 51
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H+ D + AN + +K ++ G ++ +
Sbjct: 52 ANKDHIYRVLLNTTEDDLETWANVPSALAPELKATIPTIVESGRFFHHGFGESASIKTDN 111
Query: 123 ---------NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK------ 167
SD S L ++ I+ +
Sbjct: 112 DVFIEDKLFWSDASILDIFNVEILKGTGSENLNNPNTILLSKSTAKRYFGDENPLGKTLT 171
Query: 168 --INILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVS 225
+ S ++ + F M+ + S + ++ + +
Sbjct: 172 IDNTTSFEVKGIFKDFSDNSSLNFNAIAPFMMQNFAKNPSWNNASFETFVMFDSATPVIR 231
Query: 226 GIEVFVKDPDAIEKTHENI 244
+E+ ++D E +
Sbjct: 232 DVELKIQDILNKNVEKEAL 250
>gi|90021927|ref|YP_527754.1| ABC transporter permease [Saccharophagus degradans 2-40]
gi|89951527|gb|ABD81542.1| protein of unknown function DUF214 [Saccharophagus degradans 2-40]
Length = 418
Score = 37.4 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 31/246 (12%), Positives = 63/246 (25%), Gaps = 13/246 (5%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
L ++ + ++ GV G+ L+V+M NG + G V I
Sbjct: 17 LKRHKLR------TALTAFGVFWGIFMLVVLMGAGNGLQNGAESNFTGAKNSVFIWSGRP 70
Query: 76 PLVDYQ----FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
+ Y+ RL+ Q G V + +
Sbjct: 71 TSIPYKGLSRGRYIRLNDTDMEALYSRIPEIQHIAPSNGMGDRPVNHADKTETYSLSGIQ 130
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK---INILSPYGDVTPMGMGIRSKS 188
+ R + + + + I + N +P G
Sbjct: 131 PIEITAQGYRLEQGRFLNELDIEQKRKVVVIGTHVRDVLFNGENPVGKTIKTLGVRFLVV 190
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ + D VY + FN + + + + KD + + +L
Sbjct: 191 GVIAPASLADWAQRDTRRVYFPNTTLRSTFNQRDVIHRMLIAPKDGVDAAWLEQQVQTVL 250
Query: 249 GNGVVV 254
+
Sbjct: 251 KERHKI 256
>gi|86140729|ref|ZP_01059288.1| putative ABC transporter [Leeuwenhoekiella blandensis MED217]
gi|85832671|gb|EAQ51120.1| putative ABC transporter [Leeuwenhoekiella blandensis MED217]
Length = 414
Score = 37.4 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 31/263 (11%), Positives = 73/263 (27%), Gaps = 17/263 (6%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FS + N+ F++ S S G+ L++++ G + +
Sbjct: 1 MFSLERWQEILETISKNKLRTFLTGLSVAS------GIFILVILLGFGQGMQNGISAEFQ 54
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ + + Y+ + VS S V ++
Sbjct: 55 RDAANRISVYSGVTSMGYKGLNPGRFIEMTNDDYNYLVSKYEDDIEFKSSIYRVWSGTLN 114
Query: 123 NSDFSYLQN----SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
D S + + + L + I L +
Sbjct: 115 YGDESGSYRVEGVYPDYQFLENEDLVAGRYINYDDQKLKSKIMIIGNKVKQDLFGSKEAV 174
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+ I ++ V+G++ + + V++ L +Q F + V + +K + +
Sbjct: 175 GEYVQINGINFKVVGVYSDPGGEREETRVFVPLSTSQRVFGGSDKVRNLGFTLKPQENFQ 234
Query: 239 -------KTHENIVRILGNGVVV 254
+ I L +V
Sbjct: 235 DALAQSLQFSAEIEEFLKERHLV 257
>gi|307708493|ref|ZP_07644958.1| ABC transporter permease protein [Streptococcus mitis NCTC 12261]
gi|307615409|gb|EFN94617.1| ABC transporter permease protein [Streptococcus mitis NCTC 12261]
Length = 419
Score = 37.4 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ A+ + +++ +F ++ IG++IGV +++V+M++ + + K + ++
Sbjct: 4 LKFAFSSIMAHKMRSF------LTMIGIIIGVSSVVVIMALGDSMSRQVNKNMTKSQKNI 57
Query: 69 VIQQ 72
+
Sbjct: 58 HVFF 61
>gi|150400951|ref|YP_001324717.1| hypothetical protein Maeo_0519 [Methanococcus aeolicus Nankai-3]
gi|150013654|gb|ABR56105.1| protein of unknown function DUF214 [Methanococcus aeolicus
Nankai-3]
Length = 367
Score = 37.4 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 37/92 (40%), Gaps = 7/92 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A R L ++ +F ++ +G++IGVMA I + ++ G + I + +
Sbjct: 3 FEMAKRNLKRHKLRSF------LALLGILIGVMA-ISSLGILGGGLKQGISKNFEGVANF 55
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFV 100
V+ F + + + V+ +
Sbjct: 56 VVVFPNSGEGYLHFTKKDITKLKKLDCVVIPI 87
>gi|239941807|ref|ZP_04693744.1| putative ABC transporter permease protein [Streptomyces roseosporus
NRRL 15998]
gi|239988267|ref|ZP_04708931.1| putative ABC transporter permease protein [Streptomyces roseosporus
NRRL 11379]
gi|291445254|ref|ZP_06584644.1| ABC transporter integral membrane protein [Streptomyces roseosporus
NRRL 15998]
gi|291348201|gb|EFE75105.1| ABC transporter integral membrane protein [Streptomyces roseosporus
NRRL 15998]
Length = 843
Score = 37.4 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 35/260 (13%), Positives = 73/260 (28%), Gaps = 25/260 (9%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVM----ALIVVMSVMNGFREDMI 58
+F A R + +++ ++ + VM+GV L+ ++ N FR
Sbjct: 1 MFRT-----ALRNVLAHKARL------LMTVLAVMLGVAFVSGTLVFTDTLGNAFRNQSA 49
Query: 59 KRVLGINGHVVIQ--QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
K + + ++ + V V+G A V+ G
Sbjct: 50 KSYDNVAVSIETFAGDDEKTPGIDDATLEKIRGLDGVASATGRVNGFAGVADPDGKLIGN 109
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
+ +++ + + V + KD A +GD + + +
Sbjct: 110 GWSNTGANFSPGKDGKDTQYDFTEGSGPVKNGSVALDKDTASKGKYKVGDPVRVATNGPV 169
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
GI + + +V Q AQ + V D +
Sbjct: 170 KEYTLSGIFTTEDGAVNA--------GGSLVLFDTQTAQKLYLKPGVFQNATVSAADGVS 221
Query: 237 IEKTHENIVRILGNGVVVID 256
+K + I +L
Sbjct: 222 DQKLLDEIEPLLPEDATAQT 241
>gi|229163936|ref|ZP_04291876.1| ABC transporter, permease component [Bacillus cereus R309803]
gi|228619557|gb|EEK76443.1| ABC transporter, permease component [Bacillus cereus R309803]
Length = 846
Score = 37.4 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 29/224 (12%), Positives = 67/224 (29%), Gaps = 17/224 (7%)
Query: 27 IASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANR 86
+ + + +GVM+ M L+ SV +E ++ R + ++ +
Sbjct: 10 LIALGAALGVMLATMLLLGNQSVEQSVKEQVVSRY--GDYNLQFGYIKNDMYLNNESLKG 67
Query: 87 LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDR 146
+D + + K+ + F + G +S + Y +
Sbjct: 68 IDGLENAEKISKVLIPYPFPNYKELSGKPSYWGVEQDSPEMHSYKILEGRYPKEGAEVAL 127
Query: 147 GKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGM 206
KG +++ I + K+ V+G+
Sbjct: 128 TKGYTDRENIRVGDSIKLPFP---------------QHGEKTVKVVGILNPPLMAAMGHG 172
Query: 207 VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN 250
Y + Q NL N + ++V D + ++ + + N
Sbjct: 173 AYFPIHWLQKELNLPNQFNLVQVKTPDVNVKRAIALDVNKKIEN 216
>gi|261867983|ref|YP_003255905.1| ABC transporter related protein [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261413315|gb|ACX82686.1| ABC transporter related protein [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 644
Score = 37.4 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 30/253 (11%), Positives = 89/253 (35%), Gaps = 12/253 (4%)
Query: 4 FSRFEVIVAWRY----LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
FS+ +++ A+R + +++ S ++ +G++IG+ +++ V+++ NG ++ +++
Sbjct: 245 FSKDQLMEAFRMSVSAIVAHKMR------SLLTMLGIIIGITSVVSVVALGNGSQQKILE 298
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS-GVLV 118
+ GI + + D + + I D + Q+ SS G V
Sbjct: 299 NIRGIGTNTMTIFNGNGFGDRRSRHIQNLKISDANTLSKQSYIQSVTPNTSSSGILVVGN 358
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINI-LSPYGDV 177
+ ++++ + + G + + + K
Sbjct: 359 KSFTSANLYGIGEQYFDVEGLKLKQGRLLTEDDVDQSNQVVVLDESAKKAIFANENPLGK 418
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
T + + V+ ++ ++ +Y + + I V + D
Sbjct: 419 TVIFNKRPFRVIGVVSDQQLGGFPGNSLNLYSPYSTVLNKITGGSRIGSITVKISDDVNS 478
Query: 238 EKTHENIVRILGN 250
+++ +L +
Sbjct: 479 TVAEKSLTELLKS 491
>gi|311746458|ref|ZP_07720243.1| efflux ABC transporter, permease protein [Algoriphagus sp. PR1]
gi|126575352|gb|EAZ79684.1| efflux ABC transporter, permease protein [Algoriphagus sp. PR1]
Length = 805
Score = 37.4 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 20/154 (12%), Positives = 42/154 (27%), Gaps = 9/154 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +AWR L N+ I I +G+ IG+ ++ +V+ +
Sbjct: 1 MLKNY-FKIAWRNLLRNKLRTGIHI------LGLSIGIAICFLIFNVVT--HSYSFDKFH 51
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ D N P + +SG L + + ++ +
Sbjct: 52 PDGDRIYRVNTLTDWGDGDSYPNSGTPGPLNEVIKDEISGIEEKGKLYTLYNTLVAFPNT 111
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDL 156
+ F + G L
Sbjct: 112 DKVFGRSDDVTFSDPGFFKIFPREWLAGNPETAL 145
>gi|169235052|ref|YP_001688252.1| ABC-type transport system permease protein [Halobacterium
salinarum R1]
gi|167726118|emb|CAP12884.1| ABC-type transport system permease protein [Halobacterium
salinarum R1]
Length = 380
Score = 37.4 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 8/50 (16%)
Query: 1 MSIFSRF-EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSV 49
MS+ +RF V++AWR L NR + ++ +G++IGV++ I M +
Sbjct: 1 MSVLARFPSVLMAWRNLGRNRVR------TALAALGIVIGVIS-IASMGM 43
>gi|154491750|ref|ZP_02031376.1| hypothetical protein PARMER_01366 [Parabacteroides merdae ATCC
43184]
gi|154087991|gb|EDN87036.1| hypothetical protein PARMER_01366 [Parabacteroides merdae ATCC
43184]
Length = 421
Score = 37.4 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 30/224 (13%), Positives = 66/224 (29%), Gaps = 7/224 (3%)
Query: 13 WRYLFSN-RKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
+R ++S +KN + + S V G+ LIV++ NG + ++ + + V
Sbjct: 7 FREIWSTIQKNKLRTFLTGFS---VAWGIFMLIVLLGAGNGMKNGIMSNFRNFSLNRVET 63
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
Y Y+ + ++ V +++ S + +Y N
Sbjct: 64 WPRYTSKPYKGMQMNRRIEYKDEDLIAIPRENPEVDLITASISRSDTLSYGDEYNAYSLN 123
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGD---KINILSPYGDVTPMGMGIRSKS 188
+ N D+ + ++ + G+
Sbjct: 124 GVHPSKAVIDNIEMTVGNGRFINDIDVKEKRKVIVLSPRMKEVLFKGEDPLGKYVNAGSV 183
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK 232
+ + +N Y+ AQ +N + I VK
Sbjct: 184 AYQVIGVYKAEDNDNNAPAYIPFSTAQTLYNAGYGLDEIIFTVK 227
>gi|320180597|gb|EFW55526.1| Macrolide export ATP-binding/permease protein MacB [Shigella boydii
ATCC 9905]
Length = 489
Score = 37.4 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 26/244 (10%), Positives = 82/244 (33%), Gaps = 8/244 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 98 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 151
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 152 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLCLRYNNVDVAASAN 211
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 212 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMP 271
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + F V++ ++ ++ I V VK+ + + +
Sbjct: 272 ARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 331
Query: 246 RILG 249
R+L
Sbjct: 332 RLLS 335
>gi|315651743|ref|ZP_07904748.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
gi|315485998|gb|EFU76375.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
Length = 452
Score = 37.4 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 9/61 (14%), Positives = 28/61 (45%), Gaps = 8/61 (13%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M + ++ ++ L + + ++ +GV+IG +++ ++S+ G E +
Sbjct: 1 MKVLDLLKLSIS--NLKRRKLR------TVLTVLGVLIGTASVVTMLSLGIGLDELNKES 52
Query: 61 V 61
+
Sbjct: 53 I 53
>gi|255523311|ref|ZP_05390281.1| protein of unknown function DUF214 [Clostridium carboxidivorans
P7]
gi|296188244|ref|ZP_06856636.1| efflux ABC transporter, permease protein [Clostridium
carboxidivorans P7]
gi|255512965|gb|EET89235.1| protein of unknown function DUF214 [Clostridium carboxidivorans
P7]
gi|296047370|gb|EFG86812.1| efflux ABC transporter, permease protein [Clostridium
carboxidivorans P7]
Length = 395
Score = 37.4 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M FS+ + +A+ + +N+ +F ++ +G++IG+ ++I ++ + G ++D+ +
Sbjct: 1 MK-FSKL-IKMAFSSVLANKMRSF------LTMLGIIIGITSVIALVGMGQGTKQDVASK 52
Query: 61 VLGINGHVVIQQKY 74
+ + +++
Sbjct: 53 ISSLGTNLITVNIM 66
>gi|225175213|ref|ZP_03729209.1| protein of unknown function DUF214 [Dethiobacter alkaliphilus AHT
1]
gi|225169389|gb|EEG78187.1| protein of unknown function DUF214 [Dethiobacter alkaliphilus AHT
1]
Length = 419
Score = 37.4 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A L + +G++IG+ ++ V SV+ + +M ++V +VV
Sbjct: 6 IAINNLRRRKAKM------VFVLLGLVIGIATMVSVYSVVETMQVEMTRQVSEFGANVV 58
>gi|94992607|ref|YP_600706.1| ABC transporter permease protein [Streptococcus pyogenes MGAS2096]
gi|94546115|gb|ABF36162.1| ABC transporter permease protein [Streptococcus pyogenes MGAS2096]
Length = 865
Score = 37.4 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A+ +F ++K A + S I +++GV +I MS N F ++ +
Sbjct: 423 MAFHNVFRDKKRAVLVFMSLFMGITMILGVNGVISSMSAEN-FIKEYMDYNFEYTDIQFE 481
Query: 71 QQKYYPLVDYQFIANRLDFIPD 92
Q + QF + ++ I
Sbjct: 482 QYEQLNKEVPQFDEHFVEQIKQ 503
>gi|322433737|ref|YP_004215949.1| protein of unknown function DUF214 [Acidobacterium sp. MP5ACTX9]
gi|321161464|gb|ADW67169.1| protein of unknown function DUF214 [Acidobacterium sp. MP5ACTX9]
Length = 424
Score = 37.4 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 30/260 (11%), Positives = 79/260 (30%), Gaps = 19/260 (7%)
Query: 11 VAWRYLFSNRKNAF--ISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A+R + S ++F ++ +G++IG ++I+V++V ++ + + G+ +
Sbjct: 23 IAFREIISLAIDSFRASKFRFLLTMLGMVIGSASIILVVTVGLTGKQYALDTISGLGPNK 82
Query: 69 VIQQK------------YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
V Q + + ++ +P ++ P + +S +
Sbjct: 83 VEMQYAGGEVMGPNNVSTPDFMTRDDMRAVIEQVPGIVASSPMLEYHNNISIGNGVTKNA 142
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
++ G+S D V++ + + G
Sbjct: 143 MLLGVSPQYRQVRNLKLIAGRFFDDQDATTHANVVVMVAPLAKELYG-----STQAGVGS 197
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
+ + + ++ E YF + I +KD
Sbjct: 198 TITVTGIPFTVIGIFTESIDTFGTSEISDRTLLTPYEVARYFEGTETLKEIFFSMKDSSE 257
Query: 237 IEKTHENIVRILGNGVVVID 256
+E + I I+ +
Sbjct: 258 VEPAAKRITEIIQSRHRPTS 277
>gi|308270627|emb|CBX27239.1| Macrolide export ATP-binding/permease protein macB [uncultured
Desulfobacterium sp.]
Length = 455
Score = 37.4 bits (84), Expect = 2.2, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A + L N + ++ +G++IGV A+I +M + NG + K V + +
Sbjct: 7 IKIALQALLRNPMR------AMLTTLGIVIGVGAVIAMMEIGNGSSAAIKKSVASMGANT 60
Query: 69 V 69
V
Sbjct: 61 V 61
>gi|91218328|ref|ZP_01255273.1| putative ABC transporter permease [Psychroflexus torquis ATCC
700755]
gi|91183537|gb|EAS69935.1| putative ABC transporter permease [Psychroflexus torquis ATCC
700755]
Length = 804
Score = 37.4 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 6/43 (13%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVV 46
+ +A+RYL N+ +FI+I G+ +G+ A I++
Sbjct: 1 MNLLYFKIAFRYLIKNKLYSFINII------GLSLGIAAFIII 37
>gi|300088043|ref|YP_003758565.1| hypothetical protein Dehly_0942 [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527776|gb|ADJ26244.1| protein of unknown function DUF214 [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 424
Score = 37.4 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+ +A+ L+ + + ++ + V+IG M + +V+S+ +G + ++ +
Sbjct: 7 LAMAFSNLWRRKLR------TSLTVLAVVIGAMLISLVVSLGSGLQAFVVSQF 53
>gi|240168054|ref|ZP_04746713.1| ABC transporter permease [Mycobacterium kansasii ATCC 12478]
Length = 368
Score = 37.4 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 44/236 (18%), Positives = 71/236 (30%), Gaps = 21/236 (8%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
VA + L + R S +GV I V+ ++V+ + G RV H
Sbjct: 3 VAVKNLVAERARL------VFSVLGVGIAVLLVLVISGIFVG----TTNRVTTYIDHYKG 52
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
Q D + L V G L S + G + F
Sbjct: 53 AVWVVQPGVSQMFKAVSWLPGDGRERLLTVPGVQSADPLLGSPSDFVHNGTHTAYFVLGY 112
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
++ + G S R L R L G ++ D +G+ +++
Sbjct: 113 DTRTGVGGPWSLAQGRNVARSGEVVLDRVLATKNGIRLGDKVRIVDENFTVVGLSNQTAA 172
Query: 191 VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
V + ++SL +A N VS V +D E+ I R
Sbjct: 173 VTNYY-----------AFISLPDAARLLRAGNRVSYFLVRPRDGYTAEQVAAAIHR 217
>gi|229135783|ref|ZP_04264553.1| ABC transporter, permease component [Bacillus cereus BDRD-ST196]
gi|228647649|gb|EEL03714.1| ABC transporter, permease component [Bacillus cereus BDRD-ST196]
Length = 846
Score = 37.4 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 30/224 (13%), Positives = 69/224 (30%), Gaps = 17/224 (7%)
Query: 27 IASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANR 86
+ + + +GVM+ M L+ SV +E ++ R + ++ +
Sbjct: 10 LIALGAALGVMLATMLLLGNQSVEQSVKEQVVSRY--GDYNLQFGYIKNDMYLNNESLKG 67
Query: 87 LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDR 146
+D + + K+ + F G +S + Y +
Sbjct: 68 IDGLENAEKISKALIPYPFPHYKELSGKPSYWGVEQDSPEMHSYKILEGRYPKEGAEVAL 127
Query: 147 GKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGM 206
KG +++ I + K+ V+G+
Sbjct: 128 TKGYTDRENIRVGDTIKLPFP---------------QHGEKAVKVVGILNPPLMASMGHS 172
Query: 207 VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN 250
Y + Q NL N + ++V V+D + + ++ + + N
Sbjct: 173 AYFPIHWLQKELNLLNQFNLVQVKVQDVNVKKAIAFDVNKKIEN 216
>gi|60680078|ref|YP_210222.1| putative ABC transporter ATP-binding protein [Bacteroides fragilis
NCTC 9343]
gi|60491512|emb|CAH06264.1| putative ATP-binding component of ABC transporter [Bacteroides
fragilis NCTC 9343]
gi|301161606|emb|CBW21146.1| putative ATP-binding component of ABC transporter [Bacteroides
fragilis 638R]
Length = 416
Score = 37.4 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 29/235 (12%), Positives = 60/235 (25%), Gaps = 8/235 (3%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFRE----DMIKRVLGINGHVVIQQKYYPLVDYQFIA 84
S ++ GV G+ L+ +M G +E + + +
Sbjct: 24 SLLTAFGVFWGIFMLVALMGGGQGMQEMMQAEFEGFATNSGFMASQKTGEAYKGFRKGRY 83
Query: 85 NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDF 144
++ ++ GS + N +
Sbjct: 84 WDIENADIERIRKKVKDIDVITPSIARWGSTAIYGEKKYDCSVKGLYPDYAKIENQDMAY 143
Query: 145 DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDN 204
R + ++ + I ++ +P D + + Y V+GM
Sbjct: 144 GRFINDVDVREGRKVCVIGKRVYESLFNPGEDPCGKYVRVDGIYYQVIGMCVSEGNMNIQ 203
Query: 205 GM----VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVI 255
G V + Q +N+ + I VK + I IL +
Sbjct: 204 GRASEAVVLPFSTMQQAYNMGKRIDVICYTVKPGKKVSDLEPEIEAILKEAHYIS 258
>gi|300311361|ref|YP_003775453.1| antimicrobial peptide ABC transporter ATPase [Herbaspirillum
seropedicae SmR1]
gi|300074146|gb|ADJ63545.1| ABC-type antimicrobial peptide transport system, ATPase component
protein [Herbaspirillum seropedicae SmR1]
Length = 657
Score = 37.4 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 27/210 (12%), Positives = 69/210 (32%), Gaps = 2/210 (0%)
Query: 26 SIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIAN 85
+ SF++ +G++IG+ +++ V+++ +G RE ++ + + + + D + +
Sbjct: 278 RLRSFLTMLGIIIGIASVVSVVALGSGSREQILADISAMGTNTIDIFPGADFGDMKSASI 337
Query: 86 RLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFD 145
R D + + +++ S + + + + R G
Sbjct: 338 RTLTPADAAALAEQNFVDSVTPSVATSSSARYGNISVTATINGVGEQYFRVRGLKMAQGK 397
Query: 146 RGKGVIIGKDLARNLGISIGDKINILSPYG--DVTPMGMGIRSKSYTVLGMFRMRFPDYD 203
I + + + K + + V F + +
Sbjct: 398 SFDTEGIRRYAQEVVIDANSYKKLFPDGGNALGEVIFLGSVPCRIIGVTQKRENGFGNNN 457
Query: 204 NGMVYMSLQEAQLYFNLENAVSGIEVFVKD 233
V++ A + +SGI V V D
Sbjct: 458 ALNVWVPYTTAMSRVIGQRHLSGITVRVND 487
>gi|270292554|ref|ZP_06198765.1| putative permease [Streptococcus sp. M143]
gi|270278533|gb|EFA24379.1| putative permease [Streptococcus sp. M143]
Length = 419
Score = 37.4 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ A+ + +++ +F ++ IG++IGV +++V+M++ + + K + ++
Sbjct: 4 LKFAFSSIMAHKMRSF------LTMIGIIIGVSSVVVIMALGDSMSRQVNKNMTKSQKNI 57
Query: 69 VIQQ 72
+
Sbjct: 58 QVFF 61
>gi|315613350|ref|ZP_07888259.1| ABC superfamily ATP binding cassette transporter, membrane
protein [Streptococcus sanguinis ATCC 49296]
gi|315314585|gb|EFU62628.1| ABC superfamily ATP binding cassette transporter, membrane
protein [Streptococcus sanguinis ATCC 49296]
Length = 419
Score = 37.4 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ A+ + +++ +F ++ IG++IGV +++V+M++ + + K + +
Sbjct: 4 LKFAFSSIMAHKMRSF------LTMIGIIIGVSSVVVIMALGDSMSRQVNKNMTKSQKDI 57
Query: 69 VIQQ 72
+
Sbjct: 58 HVFF 61
>gi|20091991|ref|NP_618066.1| ABC transporter, permease protein [Methanosarcina acetivorans C2A]
gi|19917197|gb|AAM06546.1| ABC transporter, permease protein [Methanosarcina acetivorans C2A]
Length = 414
Score = 37.4 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 27/253 (10%), Positives = 75/253 (29%), Gaps = 13/253 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + +A L ++ S+++ IG++IGV A++ ++S+ + ++ R+
Sbjct: 1 MRNSTYMKMALNMLLHSKLR------SWLTIIGIVIGVGAVVGIISLGDAMEANVQSRLA 54
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
++ + Y + G + +
Sbjct: 55 DMDLTKITISPGYSRAQSNMPGPGRGWGGGSTTDTELTDDDVSALQGIEGIAYITGEISG 114
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGK---GVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ +Y + + V + G+ L + + S D
Sbjct: 115 REEVTYTGETATLSITGVDPQVWQYMTTLETESGRMLKPSDKYVAVIGSGVASGIYDQDV 174
Query: 180 MGMGIRSKSYTVLGM--FRMRFPDYDNGMVYMSLQEAQLYFN--LENAVSGIEVFVKDPD 235
+ + + + + ++ +YM + A E+ I V + +
Sbjct: 175 GINQVVTINGKSVRIVGILAEEGGSEDRQIYMPIDAAVYVIEDAEEDVFDSITVKAQSEE 234
Query: 236 AIEKTHENIVRIL 248
++ I L
Sbjct: 235 LVDSVVTKIEDKL 247
>gi|306825042|ref|ZP_07458384.1| ABC superfamily ATP binding cassette transporter, membrane
protein [Streptococcus sp. oral taxon 071 str. 73H25AP]
gi|304432478|gb|EFM35452.1| ABC superfamily ATP binding cassette transporter, membrane
protein [Streptococcus sp. oral taxon 071 str. 73H25AP]
Length = 419
Score = 37.1 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ A+ + +++ +F ++ IG++IGV +++V+M++ + + K + +
Sbjct: 4 LKFAFSSIMAHKMRSF------LTMIGIIIGVSSVVVIMALGDSMSRQVNKNMTKSQKDI 57
Query: 69 VIQQ 72
+
Sbjct: 58 HVFF 61
>gi|293365639|ref|ZP_06612348.1| ABC superfamily ATP binding cassette transporter, membrane
protein [Streptococcus oralis ATCC 35037]
gi|307703588|ref|ZP_07640530.1| permease family protein [Streptococcus oralis ATCC 35037]
gi|291316007|gb|EFE56451.1| ABC superfamily ATP binding cassette transporter, membrane
protein [Streptococcus oralis ATCC 35037]
gi|307622995|gb|EFO01990.1| permease family protein [Streptococcus oralis ATCC 35037]
Length = 419
Score = 37.1 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ A+ + +++ +F ++ IG++IGV +++V+M++ + + K + +
Sbjct: 4 LKFAFSSIMAHKMRSF------LTMIGIIIGVSSVVVIMALGDSMSRQVNKNMTKSQKDI 57
Query: 69 VIQQ 72
+
Sbjct: 58 HVFF 61
>gi|134046118|ref|YP_001097604.1| hypothetical protein MmarC5_1087 [Methanococcus maripaludis C5]
gi|132663743|gb|ABO35389.1| protein of unknown function DUF214 [Methanococcus maripaludis C5]
Length = 414
Score = 37.1 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 34/257 (13%), Positives = 80/257 (31%), Gaps = 18/257 (7%)
Query: 4 FSRFEVI-VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ +A + + S++ S+I+ +G++IG+ ++I ++S + + ++
Sbjct: 1 MKPLKLFNMASKMVKSSKLR------SWITILGIVIGIASVIAIISAGDYLSNSVSDQLN 54
Query: 63 GINGHVV-------IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSG 115
+ + L+ I DV V VS + + +
Sbjct: 55 SMVSDEITLTASSAPGNDDDEPELTDMDVMILNGISDVEYVDVRVSSRNEIRFAGGRETA 114
Query: 116 VLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYG 175
+ +D + A + I I I I +
Sbjct: 115 TITGVDPAVWSQMTDEELYAGRLLQVSDKNAVIISYYTATEAFDREIGINQMITIGNKQF 174
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGI--EVFVKD 233
V + ++ + +G VY + +++E G+ E+
Sbjct: 175 KVVGILEEDETQGFGRMGGMSSNTVYMPYEAVYTLELDDDASYSIEEKEEGVYDEIIFTL 234
Query: 234 PDAIEKTH--ENIVRIL 248
+ + +T ENI L
Sbjct: 235 YEDVNQTTALENIQEKL 251
>gi|163815028|ref|ZP_02206415.1| hypothetical protein COPEUT_01184 [Coprococcus eutactus ATCC 27759]
gi|158449711|gb|EDP26706.1| hypothetical protein COPEUT_01184 [Coprococcus eutactus ATCC 27759]
Length = 895
Score = 37.1 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 18/224 (8%), Positives = 62/224 (27%), Gaps = 8/224 (3%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
MS+F+ F + + L + + F++ + I + + +++S+ +GF++ +
Sbjct: 257 MSMFTAFSL--SLNNLMTKKGRTFLTAFAGSIGI------IGIALILSLSSGFQKYINDV 308
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+Q + + ++ + + + + + +V
Sbjct: 309 QEETLATYPVQITKKAMDYSELLSKMVGNNEEDSDHNHAGEDKVYSGDIMGDMLVSMVSD 368
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ +D +N + N + G +
Sbjct: 369 VKENDLESFKNYIEDDANGFTKYTSDITYTYDTPLYVFNENSANGGVAQVNPSTTMTDMG 428
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAV 224
G+ + + ++ + + + V
Sbjct: 429 FGGMAEAQESTADFMSAFSYGSSSMDMWTQMLDNDTLLRQQYDV 472
>gi|126662435|ref|ZP_01733434.1| ABC transporter efflux protein [Flavobacteria bacterium BAL38]
gi|126625814|gb|EAZ96503.1| ABC transporter efflux protein [Flavobacteria bacterium BAL38]
Length = 416
Score = 37.1 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 28/270 (10%), Positives = 73/270 (27%), Gaps = 20/270 (7%)
Query: 1 MSIFSRF---EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDM 57
M ++ R A L +N+ + +S +GV IG+ ++I V++ ++ + +
Sbjct: 1 MLLYLRLLSESFSFAINALRNNKLR------TLLSLLGVTIGIFSIIAVLAAVDSMDKKI 54
Query: 58 IKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVL 117
+ + ++ + V ++ R F + ++ S
Sbjct: 55 KEDLSDMDMNTVYLMRFSFGPSEVPRWKREQFPNVTFEEYEYIKRNVNGIDKISFNLFTR 114
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDF---------DRGKGVIIGKDLARNLGISIGDKI 168
I + + + G +
Sbjct: 115 NENIKYESKTVNSIRVKPSTEDFFDIEPLKIDKGRLFNAAESNSGSPVIVIGSEVATGLF 174
Query: 169 NILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA--VSG 226
P G + + + + F D + V+ + + + N
Sbjct: 175 EGNDPIGKKVRLYGQKFTVIGVLKKQGQGMFGDSGDVAVFFPVNFLRRLYGDNNKSLTPA 234
Query: 227 IEVFVKDPDAIEKTHENIVRILGNGVVVID 256
I + + +E+ + + L V
Sbjct: 235 ILIKPEKGIDVEEFKAELAQKLRTHRGVKT 264
>gi|309783997|ref|ZP_07678641.1| macrolide export ATP-binding/permease protein macB [Shigella
dysenteriae 1617]
gi|308928140|gb|EFP73603.1| macrolide export ATP-binding/permease protein macB [Shigella
dysenteriae 1617]
Length = 648
Score = 37.1 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 28/270 (10%), Positives = 87/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNIRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMLGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|226310476|ref|YP_002770370.1| hypothetical protein BBR47_08890 [Brevibacillus brevis NBRC 100599]
gi|226093424|dbj|BAH41866.1| conserved hypothetical membrane protein [Brevibacillus brevis NBRC
100599]
Length = 395
Score = 37.1 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 26/255 (10%), Positives = 75/255 (29%), Gaps = 12/255 (4%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
+++N+ S ++ +G++IG+ ++IVV ++ G ++ + + + + +
Sbjct: 14 IWANKMR------SILTMLGIIIGITSVIVVTALGEGGQKAINEEMEKFGQNTFNVFINW 67
Query: 76 PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSR 135
+ + +V+ + S S+ + + + + FS
Sbjct: 68 ETKEEIAAEDMTVEDTEVLGRISPAIEYIVPSNSSTIDLKGPKKEERVNLTASTADYFSM 127
Query: 136 FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMF 195
+ + A + + + G +S
Sbjct: 128 QSTLKVAKGRLFNEIDDKEQRAVIVLEEALAQKLFGQMSPIGQRVRWGNQSLVVIGTYTE 187
Query: 196 RMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG------ 249
D + ++ E +V I D +++ + + + L
Sbjct: 188 EKFKFDMATSYGAIIPIRYEMSLQEEPSVQMIMGKAIDKASVDPAMQQVKQYLSRKHQKE 247
Query: 250 NGVVVIDWQQRYQIF 264
+ V Q+ F
Sbjct: 248 DHYRVRSMQESMDQF 262
>gi|327404026|ref|YP_004344864.1| hypothetical protein Fluta_2040 [Fluviicola taffensis DSM 16823]
gi|327319534|gb|AEA44026.1| protein of unknown function DUF214 [Fluviicola taffensis DSM 16823]
Length = 575
Score = 37.1 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 30/241 (12%), Positives = 84/241 (34%), Gaps = 23/241 (9%)
Query: 9 VIVAWRYLFSNRK---------NAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+A + L + + I+ + + + ++ IV ++V+ GF++++ +
Sbjct: 15 FFIAKK-LQRKQAVVDESLQGTKRAAKPITRIAVLSISLAMVVNIVTIAVVEGFQQEVSR 73
Query: 60 RVLGINGH-------VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSG 112
+V+G H + ++ PL+ L I V V A + +
Sbjct: 74 KVIGFGSHISIQKEGEISLRESEPLMRNPTFEKLLRKINGVTHVQSVAYKPALIQSRGNV 133
Query: 113 GSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILS 172
++ + SF + Y + +++ + + K+
Sbjct: 134 AQKEILGVVLKGVDKNYDWSFFKSYLKEGKLPTFKERASTEVLISKRIANDLHYKL---G 190
Query: 173 PYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK 232
+ + + + ++G++ D+D +V+ L + Q + ++ E+ +
Sbjct: 191 DTINAYFVKQRPIQRQFHIVGIYETGLEDFDKELVFCYLPQVQQLNDW--GITS-EILID 247
Query: 233 D 233
D
Sbjct: 248 D 248
>gi|315497883|ref|YP_004086687.1| hypothetical protein Astex_0853 [Asticcacaulis excentricus CB 48]
gi|315415895|gb|ADU12536.1| protein of unknown function DUF214 [Asticcacaulis excentricus CB
48]
Length = 376
Score = 37.1 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 24/227 (10%), Positives = 62/227 (27%), Gaps = 9/227 (3%)
Query: 36 VMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIK 95
+ + V L+ V+S++ F I+ P + IP + +
Sbjct: 20 IALAVAGLL-VLSLVGMFMGIGKNFTATIDRSPADLMVLPPDSQGFGSSQPRRNIPTLYQ 78
Query: 96 VLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKD 155
V + + + + D + ++ ++
Sbjct: 79 HPEVVEVMPYTQRWAMWANFPSPGQSAKRDGVQVIIVDPIEGAVTLPTDFPEDVILALQE 138
Query: 156 LARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQ 215
+ + + G + ++ +P N MV+MS Q A+
Sbjct: 139 PYSVVVDATSLAKLGVKVGDKAQMNGRTVNVRATI------SNYPSLFNSMVFMSRQTAK 192
Query: 216 --LYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQR 260
++ V + V ++DP +++ + +
Sbjct: 193 LLRLYDEGPRVGSLLVKLRDPSRAAIVAQDLNNMSNKQFRAWTREDL 239
>gi|167572418|ref|ZP_02365292.1| macrolide-specific ABC-type efflux carrier [Burkholderia
oklahomensis C6786]
Length = 496
Score = 37.1 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 29/243 (11%), Positives = 76/243 (31%), Gaps = 8/243 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+AW L S+R + ++ +G++IG+ +++ ++++ G + M+ + I +
Sbjct: 105 AFRMAWIALVSHRLR------TLLTMLGIIIGITSVVSIVAIGEGAKRYMLDEIGSIGTN 158
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + + D + + + S N+ S
Sbjct: 159 TINVYPGRDWGDSRADTIQTLVPADAAALAEQIYVDSATPETSRSLLLRYRNVDVNALVS 218
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVII--GKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ F + G + +A + + +
Sbjct: 219 GVGERFFQVRGMKMAQGIAFGPDEVRRQAQVAVIDENTRRKLFGANPNPLGEVILIDNLP 278
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
V + F D N V++ A + + I V V+D + +++
Sbjct: 279 CVVIGVTAEKKSAFGDMKNLNVWVPYTTASGRLFGQRHLDSITVRVRDGQPSDAAEKSLT 338
Query: 246 RIL 248
+++
Sbjct: 339 KLM 341
>gi|167565321|ref|ZP_02358237.1| macrolide-specific ABC-type efflux carrier [Burkholderia
oklahomensis EO147]
Length = 499
Score = 37.1 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 28/243 (11%), Positives = 78/243 (32%), Gaps = 8/243 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+AW L S+R + ++ +G++IG+ +++ ++++ G + M+ + I +
Sbjct: 108 AFRMAWIALVSHRLR------TLLTMLGIIIGITSVVSIVAIGEGAKRYMLDEIGSIGTN 161
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + + D + + + S N+ S
Sbjct: 162 TINVYPGRDWGDSRADTIQTLVPADAAALAEQIYVDSATPETSRSLLLRYRNVDVNALVS 221
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS- 186
+ F + G + + + + + + + +
Sbjct: 222 GVGERFFQVRGMKMAQGIAFGPDEVRRQAQVAVIDENTRRKLFGANPNPLGEVILIDNLP 281
Query: 187 -KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
V + F D N V++ A + + I V V+D + +++
Sbjct: 282 CVVIGVTAEKKSAFGDMKNLNVWVPYTTASGRLFGQRHLDSITVRVRDGQPSDAAEKSLT 341
Query: 246 RIL 248
+++
Sbjct: 342 KLM 344
>gi|124007247|ref|ZP_01691955.1| ABC transporter efflux protein, putative [Microscilla marina ATCC
23134]
gi|123987277|gb|EAY27006.1| ABC transporter efflux protein, putative [Microscilla marina ATCC
23134]
Length = 416
Score = 37.1 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 19/88 (21%), Positives = 33/88 (37%), Gaps = 8/88 (9%)
Query: 1 MSIFSRF--EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMI 58
M F A + L SN + +S +GV IG+ A+I V +V++ +
Sbjct: 1 MLFFRLILESFSFALQALRSNLLR------TTLSLLGVSIGIFAIITVFTVVDALERKIR 54
Query: 59 KRVLGINGHVVIQQKYYPLVDYQFIANR 86
+ I +V+ QK+
Sbjct: 55 DDMSFIGDNVMYIQKFPWQFGGGAYPWW 82
>gi|331700909|ref|YP_004397868.1| phosphonate-transporting ATPase [Lactobacillus buchneri NRRL
B-30929]
gi|329128252|gb|AEB72805.1| Phosphonate-transporting ATPase [Lactobacillus buchneri NRRL
B-30929]
Length = 646
Score = 37.1 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 26/249 (10%), Positives = 72/249 (28%), Gaps = 14/249 (5%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDM-IKRVLGINGH 67
+ +A + N K + G IG+ ++IV++ + NG + + + +N +
Sbjct: 249 LKMALENMRYNLKRN------LLIVFGAAIGIFSVIVMLGLGNGVQGYINHEIYSQVNPN 302
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
V K + D + + ++ G G L RG + S
Sbjct: 303 AVQVTKNVSADASTDPSKINVTTKDKNRFKDIKNVKSIDDGYFVQGGTQLRRGHKTASIS 362
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
++Q K I ++ +++ + + +
Sbjct: 363 FMQTHNKTMLTKSIAKGHAPKNGEIMLTKEYAEKLNKKHPYSLIGKRVTFYQNTLNKKKR 422
Query: 188 SYTVLGMFR-MRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ + + G ++ + +N + + ++ + N+
Sbjct: 423 PVMLTKSLKVSGIAKANTGSTSVTYSTMKSLYNSKG------IKIQPNFVTVEIAGNVKN 476
Query: 247 ILGNGVVVI 255
+ +
Sbjct: 477 VKPVENKIK 485
>gi|326798642|ref|YP_004316461.1| hypothetical protein Sph21_1225 [Sphingobacterium sp. 21]
gi|326549406|gb|ADZ77791.1| protein of unknown function DUF214 [Sphingobacterium sp. 21]
Length = 802
Score = 37.1 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 24/49 (48%), Gaps = 7/49 (14%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMN 51
+ + AWR L+ N+ S ++ +G+ IG+ IV++ +N
Sbjct: 1 MLKNY-FKTAWRNLWKNK------FYSLLNILGLAIGMAVCIVIILFVN 42
>gi|307154397|ref|YP_003889781.1| hypothetical protein Cyan7822_4598 [Cyanothece sp. PCC 7822]
gi|306984625|gb|ADN16506.1| protein of unknown function DUF214 [Cyanothece sp. PCC 7822]
Length = 405
Score = 37.1 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 28/257 (10%), Positives = 75/257 (29%), Gaps = 14/257 (5%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A L +N+ + ++ +G++IG +++ ++ + G ++ +K++ +
Sbjct: 6 SLKIATSTLLANKMR------TGLTMLGIIIGNASVVAMIGLGQGTKQLAVKQIESLGPT 59
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + I + + ++ N
Sbjct: 60 TLFVVPGSGKTRQRTIELPKTLVLADAMAIESQVPTVAAVAPELNQRLMVAFSNRNMSTQ 119
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLG----ISIGDKINILSPYGDVTPMGMG 183
+ + + I + + ++ N SP G +
Sbjct: 120 VVGTTPEYTSIRKFDVQMGRFINEIDIQRNKRVAVLGVEALKRLFNNQSPLGKQIQIKNL 179
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLEN----AVSGIEVFVKDPDAIEK 239
+ + D+ +V A + AV+ I V KD +++
Sbjct: 180 SFEVIGVLEEKGSSFGQNNDDVVVIPLATMANQLIGKTSPYGIAVTWINVAAKDEESLRA 239
Query: 240 THENIVRILGNGVVVID 256
I +L +ID
Sbjct: 240 AKFQIENLLRLRHKIID 256
>gi|229578700|ref|YP_002837098.1| protein of unknown function DUF214 [Sulfolobus islandicus
Y.G.57.14]
gi|228009414|gb|ACP45176.1| protein of unknown function DUF214 [Sulfolobus islandicus
Y.G.57.14]
Length = 395
Score = 37.1 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 39/252 (15%), Positives = 80/252 (31%), Gaps = 15/252 (5%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A++ L + R +FIS +M+G+ ++ + + G ++ + +N
Sbjct: 7 LWLAYKGLMARR------TLAFISVFAIMVGITSVSFIQAFSQGVENSVLSTLFQLNPTN 60
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ V ++ + +P + V P + V + ++V + S
Sbjct: 61 IYVFNELGFVSPTDVSYM-ETLPSISAVYPVIEAHGVVQIGGRIINVLVVGVNNISAILG 119
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
N S G IG + I S G +
Sbjct: 120 KVNLESGTVYPPITAPFAVIGHDIGNPVPNIS-------IQPGSTLILKLSNGNSVPLTV 172
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
Y VL + +V++ L A+ N I + + + + + I
Sbjct: 173 YGVLEPTESVVIGDTSDVVFIPLGGAKALINPPGYFLVI-LQADNINDVNTISTLLNYIY 231
Query: 249 GNGVVVIDWQQR 260
GN + V QQ
Sbjct: 232 GNSLTVTTIQQT 243
>gi|87429103|gb|ABD38132.1| putative MacB [Aggregatibacter actinomycetemcomitans]
Length = 657
Score = 37.1 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 30/253 (11%), Positives = 89/253 (35%), Gaps = 12/253 (4%)
Query: 4 FSRFEVIVAWRY----LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
FS+ +++ A+R + +++ S ++ +G++IG+ +++ V+++ NG ++ +++
Sbjct: 258 FSKDQLMEAFRMSVSAIVAHKMR------SLLTMLGIIIGITSVVSVVALGNGSQQKILE 311
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS-GVLV 118
+ GI + + D + + I D + Q+ SS G V
Sbjct: 312 NIRGIGTNTMTIFNGNGFGDRRSRHIQNLKISDANTLSKQSYIQSVTPNTSSSGILVVGN 371
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINI-LSPYGDV 177
+ ++++ + + G + + + K
Sbjct: 372 KSFTSANLYGIGEQYFDVEGLKLKQGRLLTEDDVDQSNQVVVLDESAKKAIFANENPLGK 431
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
T + + V+ ++ ++ +Y + + I V + D
Sbjct: 432 TVIFNKRPFRVIGVVSDQQLGGFPGNSLNLYSPYSTVLNKITGGSRIGSITVKISDDVNS 491
Query: 238 EKTHENIVRILGN 250
+++ +L +
Sbjct: 492 TVAEKSLTELLKS 504
>gi|284039454|ref|YP_003389384.1| hypothetical protein Slin_4607 [Spirosoma linguale DSM 74]
gi|283818747|gb|ADB40585.1| protein of unknown function DUF214 [Spirosoma linguale DSM 74]
Length = 811
Score = 37.1 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 9/50 (18%), Positives = 25/50 (50%), Gaps = 7/50 (14%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNG 52
+ + + +A+R L R + ++ +G+ +G+ L+++ S + G
Sbjct: 1 MLQNY-LKIAFRNLARRR------FYALVTLLGLTVGITFLLLIGSYIQG 43
>gi|124023246|ref|YP_001017553.1| ABC transporter [Prochlorococcus marinus str. MIT 9303]
gi|123963532|gb|ABM78288.1| possible ABC transporter [Prochlorococcus marinus str. MIT 9303]
Length = 409
Score = 37.1 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 34/72 (47%), Gaps = 10/72 (13%)
Query: 3 IFSRFEVI----VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMI 58
+ S +I +A+ L +NR S ++ +G++IG ++I ++ V G +
Sbjct: 1 MNSSLPLIETVSMAFSTLKANRLR------SLLTMLGIVIGNASVITLVGVGRGAQNLAE 54
Query: 59 KRVLGINGHVVI 70
++ + +V+
Sbjct: 55 SQLSNLGANVLF 66
>gi|306829686|ref|ZP_07462876.1| ABC superfamily ATP binding cassette transporter, membrane
protein [Streptococcus mitis ATCC 6249]
gi|304428772|gb|EFM31862.1| ABC superfamily ATP binding cassette transporter, membrane
protein [Streptococcus mitis ATCC 6249]
Length = 419
Score = 37.1 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ A+ + +++ +F ++ IG++IGV +++V+M++ + + K + +
Sbjct: 4 LKFAFSSIMAHKMRSF------LTMIGIIIGVSSVVVIMALGDSMSRQVNKNMTKSQKDI 57
Query: 69 VIQQ 72
+
Sbjct: 58 HVFF 61
>gi|148378587|ref|YP_001253128.1| ABC transporter permease [Clostridium botulinum A str. ATCC 3502]
gi|148288071|emb|CAL82139.1| putative permease [Clostridium botulinum A str. ATCC 3502]
Length = 820
Score = 37.1 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 31/258 (12%), Positives = 72/258 (27%), Gaps = 21/258 (8%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F VA+ + N+ + + I +M+ I+ S + + + K L
Sbjct: 1 MF----FKVAFNSIRKNKIRYMLLTCTLILSTIIMLSTS--IIKDSAIKIREDQLRKTTL 54
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ + P + + I N + I + ++P + G A + + V
Sbjct: 55 NSQLVITTADEENPFFNPKGIINSIKDIDGISHIVPRIGGMAKDVKTLKDVNIIGVDLNK 114
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
++ + N+ + L I +
Sbjct: 115 QKAAFPIELIDKYKVKDKENEIIINERYAKENSLKVGAKIKLLIGTKNKEFIISGISK-- 172
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
D +S+ AQ + ++ I + +K+ D I E
Sbjct: 173 -------------NTGVFDPSMNTAMISIDNAQYLLDQKDNAYSIGITIKNLDHINNMIE 219
Query: 243 NIVRILGNGVVVIDWQQR 260
I + + ++
Sbjct: 220 KIKPKVSSKFIIQQRYDM 237
>gi|89889567|ref|ZP_01201078.1| ABC transporter, permease component [Flavobacteria bacterium BBFL7]
gi|89517840|gb|EAS20496.1| ABC transporter, permease component [Flavobacteria bacterium BBFL7]
Length = 415
Score = 37.1 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 26/252 (10%), Positives = 65/252 (25%), Gaps = 22/252 (8%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
+ N+ F++ + V + I ++ ++ GF + V +
Sbjct: 14 IRKNKLRTFLT----------SLSVASGIFILVILLGFSSGIQNGVKSQFESDATNRIQV 63
Query: 76 PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSR 135
L+ + L + R
Sbjct: 64 STRVTTKGYKGLNPGRRLQMTNKDYENLNQKYEDQIEYKTSLYNTWGGQINYKEKQGNYR 123
Query: 136 FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG---------MGIRS 186
G + ++ N I K+ +L G + +
Sbjct: 124 IEGAFPDQQFIENATLVNGRFINNSDIDGSRKVGVLGYQMKQDLFGDKEAVGEIIILNNN 183
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIE--VFVKDPDA-IEKTHEN 243
++TV+G++ + +++ + AQ FN ++ I V + D
Sbjct: 184 INFTVVGVYTDPGGTREETRLFIPMTTAQKVFNAGENINRIAYTVKMSDSFDEAVALSAA 243
Query: 244 IVRILGNGVVVI 255
+ + + +
Sbjct: 244 MSQSIDQDLRTR 255
>gi|82777598|ref|YP_403947.1| macrolide transporter ATP-binding /permease protein [Shigella
dysenteriae Sd197]
gi|122064334|sp|Q32DZ9|MACB_SHIDS RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|81241746|gb|ABB62456.1| putative ATP-binding component of a transport system [Shigella
dysenteriae Sd197]
Length = 650
Score = 37.1 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 28/270 (10%), Positives = 87/270 (32%), Gaps = 20/270 (7%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +AWR L +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 257 ALTMAWRALAANKMR------TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTN 310
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+I + + +S + +
Sbjct: 311 TIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASAN 370
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL--SPYGDVTPMGMGIR 185
+ + YG ++ + + + S + + + +
Sbjct: 371 GVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNIRRQLFPHKADVVGEVILVGNMP 430
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
++ V + V++ ++ ++ I V VK+ + + +
Sbjct: 431 ARVIGVAEEKQSMLGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT 490
Query: 246 RILGNGVVVIDWQQRYQIFFSC-----YES 270
R+L D FF+ ++
Sbjct: 491 RLLSLRHGKKD-------FFTWNMDGVLKT 513
>gi|114571152|ref|YP_757832.1| hypothetical protein Mmar10_2608 [Maricaulis maris MCS10]
gi|114341614|gb|ABI66894.1| protein of unknown function DUF214 [Maricaulis maris MCS10]
Length = 411
Score = 37.1 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 39/258 (15%), Positives = 86/258 (33%), Gaps = 18/258 (6%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + VA L N S ++ +GV+IGV ++IV++S+ G ++ + ++
Sbjct: 1 MNALASLRVALTALRINALR------SALAMLGVIIGVASVIVLVSISEGTKQAVEAQIA 54
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQA----FVSGLSSGGSGVLV 118
+++I + + + V+ A +SSG + V
Sbjct: 55 SFGANLLIIRPGSSMFGGRRGGAGSADPLTDGDVVAIREQVAGLAGVSGEVSSGTTMVFG 114
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDK--INILSPYGD 176
S + + G V ++ G + + + SP G
Sbjct: 115 GINWTSRIQGVNPDYFSARGWVIDEGRAFSGAEDTGGRRYAVVGQTIIRELFDGASPLGQ 174
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE------NAVSGIEVF 230
+G T+ + + +V+ L + F +AVS I
Sbjct: 175 SIRIGAQPFEVIGTLEPKGESSWGQDQDDVVFAPLSTVRQRFGAGMSATVRDAVSTIYAD 234
Query: 231 VKDPDAIEKTHENIVRIL 248
+ ++ + +I +L
Sbjct: 235 IAPGESTSRVIADIEDLL 252
>gi|320354094|ref|YP_004195433.1| hypothetical protein Despr_1994 [Desulfobulbus propionicus DSM
2032]
gi|320122596|gb|ADW18142.1| protein of unknown function DUF214 [Desulfobulbus propionicus DSM
2032]
Length = 399
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 11/69 (15%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M F + + I + + R ++F ++ +G+ +G+ A+I++ S+ G + ++
Sbjct: 1 MDFFDQLQFITT--SIRAKRLHSF------LTGLGIAVGIAAVILLTSMGEGLQRFVLAE 52
Query: 61 VLGINGHVV 69
+++
Sbjct: 53 FTQFGTNLI 61
>gi|228936253|ref|ZP_04099052.1| ABC transporter, permease component [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228823369|gb|EEM69202.1| ABC transporter, permease component [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 846
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 29/224 (12%), Positives = 66/224 (29%), Gaps = 17/224 (7%)
Query: 27 IASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANR 86
+ + + +GVM+ M L+ SV +E ++ R + ++ +
Sbjct: 10 LIALGAALGVMLATMLLLGNQSVEKSVKEQVVSRY--GDYNLQFGYIKNDMYLNNESLKG 67
Query: 87 LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDR 146
+D + + K+ + F + G +S + Y +
Sbjct: 68 IDGLENAEKISKVLIPYPFPNYKELSGKPSYWGVEQDSPEMHSYKILEGRYPKDGAEVAL 127
Query: 147 GKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGM 206
KG + + + K+ V+G+
Sbjct: 128 TKGY---------------TERENIRLGDTIKLPFPQHGEKTVKVVGILNPPLMAAMGHG 172
Query: 207 VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN 250
Y +Q Q NL N + ++V D + ++ + + N
Sbjct: 173 AYFPIQWLQKELNLPNQFNLVQVKTADVNVKRTIALDVNKKIEN 216
>gi|196040503|ref|ZP_03107803.1| ABC transporter, permease component [Bacillus cereus NVH0597-99]
gi|196028635|gb|EDX67242.1| ABC transporter, permease component [Bacillus cereus NVH0597-99]
Length = 857
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 29/224 (12%), Positives = 66/224 (29%), Gaps = 17/224 (7%)
Query: 27 IASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANR 86
+ + + +GVM+ M L+ SV +E ++ R + ++ +
Sbjct: 21 LIALGAALGVMLATMLLLGNQSVEKSVKEQVVSRY--GDYNLQFGYIKNDMYLNNESLKG 78
Query: 87 LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDR 146
+D + + K+ + F + G +S + Y +
Sbjct: 79 IDGLENAEKISKVLIPYPFPNYKELSGKPSYWGVEQDSPEMHSYKILEGRYPKDGAEVAL 138
Query: 147 GKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGM 206
KG + + + K+ V+G+
Sbjct: 139 TKGY---------------TERENIRLGDTIKLPFPQHGEKTVKVVGILNPPLMAAMGHG 183
Query: 207 VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN 250
Y +Q Q NL N + ++V D + ++ + + N
Sbjct: 184 AYFPIQWLQKELNLPNQFNLVQVKTADVNVKRAIALDVNKKIEN 227
>gi|309800045|ref|ZP_07694241.1| ABC transporter permease protein [Streptococcus infantis SK1302]
gi|308116335|gb|EFO53815.1| ABC transporter permease protein [Streptococcus infantis SK1302]
Length = 419
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ A+ + +++ +F ++ IG++IGV +++V+M++ + + K + +
Sbjct: 4 LKFAFSSIMAHKMRSF------LTMIGIIIGVSSVVVIMALGDSMSRQVNKNMTKSQKDI 57
Query: 69 VIQQ 72
+
Sbjct: 58 HVFF 61
>gi|306821541|ref|ZP_07455141.1| ABC superfamily ATP binding cassette transporter, membrane
protein [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304550435|gb|EFM38426.1| ABC superfamily ATP binding cassette transporter, membrane
protein [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 401
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 13/75 (17%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F F +A + +N+ AF ++ +G++IG+ +++ + S+ N + + +
Sbjct: 4 MFENF--KMALSSVKANKMRAF------LTMLGIIIGISSVMTITSIGNAVSDSLDEAFK 55
Query: 63 GINGHVVIQQKYYPL 77
G + ++ Y
Sbjct: 56 GFGKNRIVVYMNYRN 70
>gi|295094300|emb|CBK83391.1| ABC-type antimicrobial peptide transport system, ATPase component
[Coprococcus sp. ART55/1]
Length = 883
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 18/224 (8%), Positives = 62/224 (27%), Gaps = 8/224 (3%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
MS+F+ F + + L + + F++ + I + + +++S+ +GF++ +
Sbjct: 245 MSMFTAFSL--SLNNLMTKKGRTFLTAFAGSIGI------IGIALILSLSSGFQKYINDV 296
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+Q + + ++ + + + + + +V
Sbjct: 297 QEETLATYPVQITKKAMDYDELLSKMVGNNEEDSDHNHAGEDKVYSGDIMGDMLVSMVSD 356
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ +D +N + N + G +
Sbjct: 357 VKENDLESFKNYIEDDANGFTKYTSDITYTYDTPLYVFNENSANGGVAQVNPSTTMTDMG 416
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAV 224
G+ + + ++ + + + V
Sbjct: 417 FGGMAEAQESTADFMSAFSYGSSSMDMWTQMLDNDTLLKQQYDV 460
>gi|308233458|ref|ZP_07664195.1| hypothetical protein AvagD15_00297 [Atopobium vaginae DSM 15829]
gi|328943894|ref|ZP_08241359.1| ABC superfamily ATP binding cassette transporter, membrane
protein [Atopobium vaginae DSM 15829]
gi|327491863|gb|EGF23637.1| ABC superfamily ATP binding cassette transporter, membrane
protein [Atopobium vaginae DSM 15829]
Length = 450
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 29/67 (43%), Gaps = 6/67 (8%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
L +N+ S ++ +G++IG+ A+I + S++ G + + + ++ Y
Sbjct: 14 LKANKGR------SILTILGIVIGITAVISMTSLIGGIQNTLSSSLGLERSKLIYVTMYQ 67
Query: 76 PLVDYQF 82
+
Sbjct: 68 DKDSWSE 74
>gi|95931229|ref|ZP_01313949.1| protein of unknown function DUF214 [Desulfuromonas acetoxidans
DSM 684]
gi|95132707|gb|EAT14386.1| protein of unknown function DUF214 [Desulfuromonas acetoxidans
DSM 684]
Length = 427
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 28/43 (65%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
S ++ +G++ GV ++I +++V +G ++ ++++ + V+I
Sbjct: 29 SLLTMLGMVFGVASVIAMLAVGSGAGQETLQQIRELGSDVIIM 71
>gi|255535952|ref|YP_003096323.1| putative ABC transporter [Flavobacteriaceae bacterium 3519-10]
gi|255342148|gb|ACU08261.1| putative ABC transporter [Flavobacteriaceae bacterium 3519-10]
Length = 409
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 33/250 (13%), Positives = 84/250 (33%), Gaps = 10/250 (4%)
Query: 13 WRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI--NGHVVI 70
WR +F + ++ + + +S V +G+ IV+ + +G + + N +
Sbjct: 7 WREIFESIRSNILR--TVLSGFTVALGLYIFIVLFGIGSGLKNAFTEGFTRDAANLISIF 64
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
K ++ + + + S + + V+ S +
Sbjct: 65 SGKTSLAYGGLQSDRQIVLKNEDFDNVVDSDPEKVESATPRYSTNMTVKYGKESGSYQIS 124
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK--S 188
+ + G+ + +D++ +++ ++ + +P+G +
Sbjct: 125 GANPNEQIIENRVLTEGRYLN-NRDMSEKHNVAVIGRMVQRDLIKNGSPIGKDLAINGTF 183
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK---DPDAIEKTHENIV 245
+ V+G+F D+D M+ + + Q + VS I V P + E +
Sbjct: 184 FKVVGVFSDDGGDWDERMITVPITTLQQLKKGSDTVSTIFVTYDQKLSPAQAIEYGEQLQ 243
Query: 246 RILGNGVVVI 255
+ L V
Sbjct: 244 KQLKAKNKVS 253
>gi|258512179|ref|YP_003185613.1| hypothetical protein Aaci_2215 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478905|gb|ACV59224.1| protein of unknown function DUF214 [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 402
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 11/44 (25%), Positives = 26/44 (59%), Gaps = 6/44 (13%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNG 52
+ +A L +N+ AF ++ +G+ IGV +++ ++++ NG
Sbjct: 7 LRMALASLAANKTRAF------LTMLGIWIGVASILAIVAIGNG 44
>gi|218290245|ref|ZP_03494399.1| protein of unknown function DUF214 [Alicyclobacillus
acidocaldarius LAA1]
gi|218239720|gb|EED06911.1| protein of unknown function DUF214 [Alicyclobacillus
acidocaldarius LAA1]
Length = 402
Score = 37.1 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 11/44 (25%), Positives = 26/44 (59%), Gaps = 6/44 (13%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNG 52
+ +A L +N+ AF ++ +G+ IGV +++ ++++ NG
Sbjct: 7 LRMALASLAANKTRAF------LTMLGIWIGVASILAIVAIGNG 44
>gi|315645147|ref|ZP_07898273.1| hypothetical protein PVOR_06565 [Paenibacillus vortex V453]
gi|315279568|gb|EFU42873.1| hypothetical protein PVOR_06565 [Paenibacillus vortex V453]
Length = 442
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 22/48 (45%), Gaps = 6/48 (12%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMI 58
+AW + + + + + G+ IG A+IV +S+ N + +
Sbjct: 3 LAWGQIKRRK------VVTALCMTGISIGCAAIIVAISIGNAAQGYLE 44
>gi|42782273|ref|NP_979520.1| permease, putative [Bacillus cereus ATCC 10987]
gi|42738198|gb|AAS42128.1| permease, putative [Bacillus cereus ATCC 10987]
Length = 850
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 41/253 (16%), Positives = 78/253 (30%), Gaps = 19/253 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ A R L NR F + ++IGV + F M+ ++ + H
Sbjct: 3 LKSALRSLARNRLRTF------FTVFSILIGVASF---------FSMSMLVELVPRSIHE 47
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ V Q +D + + Q ++ G S V + S
Sbjct: 48 SSKILLGGNVSVQSYLKPMDR--ETLISSIPKEEQKALTTSLLGQSMVKSDRKTTSLIVK 105
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ + + + L++N + K+ + M S
Sbjct: 106 GIETNHYPFFGDNLFPNIRTLHKDELLLSKNTADRLQVKVGDRVEIPNRFTGAMTSYKIS 165
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHENIVRI 247
V G+ G Y+ L +AQ N+ ++ + + + I +NI +
Sbjct: 166 GLVEGVQESYGDASIFGTAYLHLDQAQQLLNVPAGTINEALILLNENVNISSFKKNIQKQ 225
Query: 248 LGNGVVVIDWQQR 260
L VID Q +
Sbjct: 226 LPQS-SVIDVQDK 237
>gi|300868298|ref|ZP_07112927.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC
6506]
gi|300333733|emb|CBN58111.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC
6506]
Length = 420
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+ +A L++N+ + ++ +GV+IG+ ++I + SV G ++ ++
Sbjct: 18 LFMATEALWNNKLR------TGLTMLGVIIGISSVIAISSVGQGVQKSTEEQ 63
>gi|256003614|ref|ZP_05428603.1| protein of unknown function DUF214 [Clostridium thermocellum DSM
2360]
gi|255992405|gb|EEU02498.1| protein of unknown function DUF214 [Clostridium thermocellum DSM
2360]
gi|316939767|gb|ADU73801.1| protein of unknown function DUF214 [Clostridium thermocellum DSM
1313]
Length = 471
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 12/67 (17%), Positives = 26/67 (38%), Gaps = 6/67 (8%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A++ L + + ++ GV+IG ++ V+MS+ G + + I
Sbjct: 9 MAFKNLMRRKIR------TLLTLTGVLIGTTSIAVMMSIGVGMDRAFESQFSRMGSLHTI 62
Query: 71 QQKYYPL 77
Y
Sbjct: 63 TVTGYYY 69
>gi|255531500|ref|YP_003091872.1| hypothetical protein Phep_1597 [Pedobacter heparinus DSM 2366]
gi|255344484|gb|ACU03810.1| protein of unknown function DUF214 [Pedobacter heparinus DSM
2366]
Length = 861
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
R+ +AWR N+ F+ +S +++G+ AL+ V S + + D+ ++
Sbjct: 15 RWLFKMAWRDSRHNKSRLFLFTSS------IVLGIAALVAVYSFRDNLQHDIDEQ 63
>gi|115373376|ref|ZP_01460675.1| ABC transporter permease protein [Stigmatella aurantiaca DW4/3-1]
gi|115369675|gb|EAU68611.1| ABC transporter permease protein [Stigmatella aurantiaca DW4/3-1]
Length = 383
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 25/225 (11%), Positives = 73/225 (32%), Gaps = 7/225 (3%)
Query: 30 FISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD- 88
++ +G+ +GV L+ ++ ++ G + ++ I + + K+ + + R
Sbjct: 1 MLTTVGIGVGVCTLLAIVGIIQGINQSFEDQLSHIGANTLQVSKFPWTMQGDWWEYRNRK 60
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
+ + + ++ R + + + Y VS+
Sbjct: 61 DLSADLVEAVRHGSEHVLAAAPLYFQHGEGRFLERKIGAVTLVGTTPDYATVSSLVVDRG 120
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMG-----MGIRSKSYTVLGMFRMRFPDYD 203
DL +++ + + + + P+G G + L +
Sbjct: 121 RFFTETDLNERAAVAVIGAELVRTLFTGIDPLGHRLLLEGKPYRVVGTLEPKGTILGENQ 180
Query: 204 NGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ + + + +F + + I V V PD + + + +L
Sbjct: 181 DLVALVPSRTFLAHFGKKRSP-NIAVAVDSPDHVLTVQDQLTAVL 224
>gi|313234055|emb|CBY19632.1| unnamed protein product [Oikopleura dioica]
Length = 616
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 19/203 (9%), Positives = 44/203 (21%), Gaps = 9/203 (4%)
Query: 15 YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKY 74
+++ + + + + I+ + + GV +V+ GFR+ + + N
Sbjct: 408 FIWGQKSSGAVPFTTMIAILCMWFGVSLPLVMTGFYFGFRKAAYEAPVRTNQIPRQVPDQ 467
Query: 75 YPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG---------ISNSD 125
++ +P + + + +
Sbjct: 468 PWYMNAFVSLLMSGVLPFGAVFIELFFIFTALWENEFYYLFGFLFLVFIILIIACSQIAI 527
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ Y F G G L +I P I
Sbjct: 528 VMVYFQLCAEDYHWWWRSFFVGSGSAFYVFLYSIFYFYTKLEITSFVPTLLYFGYTALIT 587
Query: 186 SKSYTVLGMFRMRFPDYDNGMVY 208
G +Y
Sbjct: 588 LTFAIFTGTISFYASFVFINKIY 610
>gi|255654688|ref|ZP_05400097.1| ABC transporter ATP-binding protein [Clostridium difficile
QCD-23m63]
Length = 407
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 36/262 (13%), Positives = 85/262 (32%), Gaps = 12/262 (4%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGV-MALIVVMSVMNGFREDMIK 59
M + + +RYL + + + I +++G M L +E
Sbjct: 1 MKFYQ-----LGFRYLQRKKGKTILLLIVLILVNSMILGTSMILRTTNESKQAMQEKTNS 55
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
+++ + + + + + + + S S+ + +
Sbjct: 56 KIVAEITSKDSKITENEVNKIETLEDVSAINRIGRQDVFPASFAPVTLNTSTNEENLKIA 115
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDF--DRGKGVIIGKDLARNLGISIGDKINI---LSPY 174
+S D Y S D+ KG +I +LA + +GD I +
Sbjct: 116 LLSYDDLEKDSPFSEMQYRLSSGDYIKHEKKGAVINANLANQNELKVGDTIELSTENGTK 175
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
V +G+ + + + + V++ + F E + V+ + P
Sbjct: 176 VSVQIIGIFMSAGNVEKDQPTETTAVNRIENQVFIDNSTYKELF-KEAEFEKLCVYSQRP 234
Query: 235 DAIEKTHENIVRILGNGVVVID 256
+ ++ ++ +ILGN V +
Sbjct: 235 EKLDVLETSLQKILGNDVELST 256
>gi|225574664|ref|ZP_03783274.1| hypothetical protein RUMHYD_02741 [Blautia hydrogenotrophica DSM
10507]
gi|225038132|gb|EEG48378.1| hypothetical protein RUMHYD_02741 [Blautia hydrogenotrophica DSM
10507]
Length = 1199
Score = 37.1 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 35/274 (12%), Positives = 79/274 (28%), Gaps = 38/274 (13%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK------ 59
F + R LF +K F ++ G+ G MAL++ V G R+ +
Sbjct: 821 NFSWKSSVRNLFRYKKRFF------MTVFGIS-GSMALLL---VGFGLRDSITDIARLQY 870
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
L VI + + Q + ++ ++ + + Q + S L
Sbjct: 871 EQLQHFDATVIMDEDASGKERQDVDVFIEENGEIKRATKVLFKQVTTRENHANLSVYLYV 930
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + + + + N I +++
Sbjct: 931 PENME-------------EFQQDVTFQDRKTKEQYTMDDNGAIVSEKTASLVGVKEGDVI 977
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+ K + +Y + +Y+S + + F E I + D E+
Sbjct: 978 VLEEDNQKYEVPVSHIC---ENYLSHYIYLSPKLYRETFKEEPQFHDILLTFHTEDESEE 1034
Query: 240 TH--ENIVRILGNGVVV---IDWQQRYQIFFSCY 268
+ I+ + + + Q++ S
Sbjct: 1035 AKIGQQILE-YPGALSISYNRNIQEQLNNMLSAL 1067
>gi|29655095|ref|NP_820787.1| export ABC transporter permease protein [Coxiella burnetii RSA 493]
gi|29542364|gb|AAO91301.1| export ABC transporter permease protein [Coxiella burnetii RSA 493]
Length = 404
Score = 37.1 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 25/260 (9%), Positives = 74/260 (28%), Gaps = 16/260 (6%)
Query: 3 IFSR-----FEVIV--AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFRE 55
+F R F + A R L S++ +F ++ +G+++G +++ +++ E
Sbjct: 1 MFHRQENMSFIRYIKAALRNLISSKLRSF------LAILGILVGTASVVALITSSQLATE 54
Query: 56 DMIKRVLGINGHVVIQQKYYPLVDYQ---FIANRLDFIPDVIKVLPFVSGQAFVSGLSSG 112
+ + + +++ Q L IP + ++ A + L +
Sbjct: 55 HALDQFKELGTNLLAMDVQPRPGQQQTDVSQQITLAKIPQIKHASQQIALVAPYTSLFNT 114
Query: 113 GSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILS 172
+ + + + F + + I +
Sbjct: 115 LYFEGKQTEGQVLGATAELAEIVKIQIDKGRFVSYLDRNSFFCVIGSDVGKDFLAKGIAN 174
Query: 173 PYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK 232
P G +G + + F D + + + + ++ + +
Sbjct: 175 PIGHQISIGKFVFTIIGVAKHWQPNWFLYADINKGAIIPLATSFFLSKDAQINNLLFRLV 234
Query: 233 DPDAIEKTHENIVRILGNGV 252
I + + +
Sbjct: 235 PDPDIAEVQNALADKMSQLY 254
>gi|15893612|ref|NP_346961.1| permease [Clostridium acetobutylicum ATCC 824]
gi|15023164|gb|AAK78301.1|AE007546_7 Predicted permease [Clostridium acetobutylicum ATCC 824]
gi|325507734|gb|ADZ19370.1| permease [Clostridium acetobutylicum EA 2018]
Length = 398
Score = 37.1 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 29/46 (63%), Gaps = 6/46 (13%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+++N+ +F ++ +G++IG+ ++IV++ + G +E + ++
Sbjct: 14 IWANKVRSF------LTMLGIIIGIASVIVLVGIGQGTKESVSSQI 53
>gi|229169679|ref|ZP_04297379.1| ABC transporter, permease component [Bacillus cereus AH621]
gi|228613718|gb|EEK70843.1| ABC transporter, permease component [Bacillus cereus AH621]
Length = 846
Score = 37.1 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 30/224 (13%), Positives = 69/224 (30%), Gaps = 17/224 (7%)
Query: 27 IASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANR 86
+ + + +GVM+ M L+ SV +E ++ R + ++ +
Sbjct: 10 LIALGAALGVMLATMLLLGNQSVEQSVKEQVVSRY--GDYNLQFGYIKNDMYLNNESLKG 67
Query: 87 LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDR 146
+D + + K+ + F G +S + Y +
Sbjct: 68 IDGLENAEKISKALIPYPFPHYKELSGKPSYWGVEQDSPEMHSYKILEGRYPKEGAEVAL 127
Query: 147 GKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGM 206
KG +++ I + K+ V+G+
Sbjct: 128 TKGYTDRENIRVGDTIKLPFP---------------QHGEKAVKVVGILNPPLMASMGHS 172
Query: 207 VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN 250
Y + Q NL N + ++V V+D + + ++ + + N
Sbjct: 173 AYFPIHWLQKELNLLNQFNLVQVKVQDVNVKKAIAFDVHKKIEN 216
>gi|295688308|ref|YP_003592001.1| hypothetical protein Cseg_0877 [Caulobacter segnis ATCC 21756]
gi|295430211|gb|ADG09383.1| conserved hypothetical protein [Caulobacter segnis ATCC 21756]
Length = 516
Score = 37.1 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 9/62 (14%)
Query: 1 MSIFSRF--------EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNG 52
M++F E+ + WR S RK+ + S +GVMI + + + + M G
Sbjct: 1 MALFKPASTPWLLVHELRLTWRGAMSGRKHGAVGSIIAFSVLGVMILIGGVFLALG-MRG 59
Query: 53 FR 54
Sbjct: 60 HE 61
>gi|270486984|ref|ZP_06204058.1| ABC transporter, ATP-binding protein [Yersinia pestis KIM D27]
gi|270335488|gb|EFA46265.1| ABC transporter, ATP-binding protein [Yersinia pestis KIM D27]
Length = 463
Score = 37.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 14/148 (9%), Positives = 51/148 (34%), Gaps = 6/148 (4%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+++AWR + +N+ + ++ +G++IG+ +++ ++ V + ++ ++ + I +
Sbjct: 258 ALLMAWRAMSANKMR------TALTMLGIIIGIASVVSILVVGDAAKQLVLADIRAIGTN 311
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + D+ + A + +
Sbjct: 312 TIDIYPGKDFGDDDPSTRQALVHDDMAALKAQSYVSAVSPSIGGSMRLRFGNIDVAASVL 371
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKD 155
+ + + R +G + +
Sbjct: 372 GVSDEYFRVFGMAMEQGAPITREQVERQ 399
>gi|225378603|ref|ZP_03755824.1| hypothetical protein ROSEINA2194_04271 [Roseburia inulinivorans DSM
16841]
gi|225209440|gb|EEG91794.1| hypothetical protein ROSEINA2194_04271 [Roseburia inulinivorans DSM
16841]
Length = 695
Score = 37.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 42/246 (17%), Positives = 77/246 (31%), Gaps = 16/246 (6%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
F A R LF +K F ++ +G+ G M L++V GF +K +
Sbjct: 312 NFSNKAAVRNLFRYKKRLF------MTVLGIG-GCMGLLLV-----GF---GVKDSIMTI 356
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
G + V D + + LS + G +
Sbjct: 357 GDRQYNFIHTYQVKMTLADADTDEEKQEVLDSVLKESTTKAAMLSHESTIDACCGANGEK 416
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ + K + G+ I +K+ L + + + +
Sbjct: 417 KQSTYLFIPSDADELDEFVSLQNRISGQKYTLDDEGVIISEKLATLLDVSEGDDIYLEVS 476
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
S +Y + + + Y VYM+ + Q F + I V KDP+ I ++
Sbjct: 477 SLNYKPVKVMHIAENYY-YHYVYMTPECYQSLFGKDIEYDEIFVVNKDPEDISYENDFSA 535
Query: 246 RILGNG 251
+ L N
Sbjct: 536 KYLDNN 541
>gi|229014142|ref|ZP_04171263.1| ABC transporter, permease component [Bacillus mycoides DSM 2048]
gi|228747096|gb|EEL96978.1| ABC transporter, permease component [Bacillus mycoides DSM 2048]
Length = 846
Score = 37.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 30/224 (13%), Positives = 69/224 (30%), Gaps = 17/224 (7%)
Query: 27 IASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANR 86
+ + + +GVM+ M L+ SV +E ++ R + ++ +
Sbjct: 10 LIALGAALGVMLATMLLLGNQSVEQSVKEQVVSRY--GDYNLQFGYIKNDMYLNNESLKG 67
Query: 87 LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDR 146
+D + + K+ + F G +S + Y +
Sbjct: 68 IDGLENAEKISKALIPYPFPHYKELSGKPSYWGVEQDSPEMHSYKILEGRYPKEGAEVAL 127
Query: 147 GKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGM 206
KG +++ I + K+ V+G+
Sbjct: 128 TKGYTDRENIRVGDTIKLPFP---------------QHGEKAVKVVGILNPPLMASMGHS 172
Query: 207 VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN 250
Y + Q NL N + ++V V+D + + ++ + + N
Sbjct: 173 AYFPIHWLQKELNLLNQFNLVQVKVQDVNVKKAIAFDVHKKIEN 216
>gi|113954392|ref|YP_730622.1| macrolide ABC transporter permease [Synechococcus sp. CC9311]
gi|113881743|gb|ABI46701.1| macrolide ABC transporter, permease protein [Synechococcus sp.
CC9311]
Length = 409
Score = 37.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 34/83 (40%), Gaps = 10/83 (12%)
Query: 3 IFSRFEVI----VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMI 58
+ S+ + +A L +NR S ++ +G++IG ++I ++ V G +
Sbjct: 1 MASKLPLADTVGMALSTLKANRLR------SLLTMLGIVIGNASVITLVGVGRGAQNLAE 54
Query: 59 KRVLGINGHVVIQQKYYPLVDYQ 81
++ + +V+ Q
Sbjct: 55 DQLSSLGANVLFVVPGSNDTRRQ 77
>gi|148263524|ref|YP_001230230.1| hypothetical protein Gura_1458 [Geobacter uraniireducens Rf4]
gi|146397024|gb|ABQ25657.1| protein of unknown function DUF214 [Geobacter uraniireducens Rf4]
Length = 385
Score = 37.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 31/262 (11%), Positives = 71/262 (27%), Gaps = 23/262 (8%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMAL----IVVMSVMNGFREDMIKRVL 62
F + + R F ++ +F ++ +GV I ++A +V G + R++
Sbjct: 2 FILKLIIRNAFRHKLRSF------LTVLGVAIAILAFGLLRTLVGLWYLGVEQSSATRLV 55
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
N ++ D + I + +
Sbjct: 56 TRNAISLVFSLPISYKDRIRQIPGVKQISYGNWF---------GGIYIDEKNFFPNFAVE 106
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ L F G +G + G+ LA +GD I + G + P
Sbjct: 107 PRSYLELYPEFVLSPGERDAFIHDRRGAVAGRKLAAKYRWKVGDMITL---KGTIFPGEW 163
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ + Y++ + + + V P+ + +
Sbjct: 164 EFVLRGIYRGAQKSTDETQFFFNWEYLNETMKRTVPRRADQAGFYMIGVTKPELAAEVSQ 223
Query: 243 NIVRILGNGVVVIDWQQRYQIF 264
+ N + + + F
Sbjct: 224 AVDSTFRNSL-AETLTETEKAF 244
>gi|319953615|ref|YP_004164882.1| hypothetical protein Celal_2089 [Cellulophaga algicola DSM 14237]
gi|319422275|gb|ADV49384.1| protein of unknown function DUF214 [Cellulophaga algicola DSM
14237]
Length = 415
Score = 37.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 22/233 (9%), Positives = 67/233 (28%), Gaps = 11/233 (4%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
+ N+ F++ S S G+ L++++ G + + K +
Sbjct: 14 IRKNKLRTFLTGLSVAS------GIFILVILLGFGQGMQNGIAKEFESDAATSIWIWTET 67
Query: 76 PLVDYQFIANRLDFIPDVIKVL-----PFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
Y+ + + ++ + + +
Sbjct: 68 TQNAYKGLNPGREIQFRNEDYTTLVDKMDLNLEHKTMFYLPRDVTTTYKNDALIYQVMGT 127
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
++F N + R + + IS K + I + +
Sbjct: 128 TKDAQFLENQNMVQGRFLNWQDESQVTKVAVISAKIKREAFDAIDSPIGEYIKISNILFK 187
Query: 191 VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
++G+++ + D + +++ + +Q FN + + + E+ +
Sbjct: 188 IIGVYKDKAGDREENRIFIPISTSQKVFNGSDKLDNLVFSSPPVANFEQAVQQ 240
>gi|255009865|ref|ZP_05281991.1| putative ABC transporter [Bacteroides fragilis 3_1_12]
gi|313147651|ref|ZP_07809844.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313136418|gb|EFR53778.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 419
Score = 37.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 24/218 (11%), Positives = 56/218 (25%), Gaps = 8/218 (3%)
Query: 20 RKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVD 79
++N + + + V G+ LIV++ NG K + + +
Sbjct: 13 KRNKLRTFLTGFA---VAWGIFMLIVLLGAGNGLIHAFEKSSSARALNSIKIYPGWTGKP 69
Query: 80 YQ--FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFY 137
Y R+ + +S +S + + +
Sbjct: 70 YDGLKEGRRIQLDNKDLNATMEHFSDNIISVGASQWQSNVNLSYGQEYVNLSLEGVYPNF 129
Query: 138 GNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK---SYTVLGM 194
V + I DL + + +G +G +
Sbjct: 130 TEVESVKSTEGRFINDIDLKERRKVIVLHTKTAEILFGKSRTEPIGKFVNAGGVSYQVVG 189
Query: 195 FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK 232
D + Y+ Q+ +N + ++ + K
Sbjct: 190 LYTDPGDQGSSEAYIPFSTLQVIYNKGDKLNNLTFTTK 227
>gi|225017521|ref|ZP_03706713.1| hypothetical protein CLOSTMETH_01448 [Clostridium methylpentosum
DSM 5476]
gi|224949671|gb|EEG30880.1| hypothetical protein CLOSTMETH_01448 [Clostridium methylpentosum
DSM 5476]
Length = 409
Score = 37.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 8/47 (17%), Positives = 20/47 (42%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVM 47
M F R A+R +K + S ++ + V + +++++
Sbjct: 63 MKFFERNLFERAFRNSRLKKKRKLVRGLSVLTTVVVALAAFTVVLLL 109
>gi|182413457|ref|YP_001818523.1| hypothetical protein Oter_1639 [Opitutus terrae PB90-1]
gi|177840671|gb|ACB74923.1| protein of unknown function DUF214 [Opitutus terrae PB90-1]
Length = 415
Score = 37.1 bits (83), Expect = 2.9, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 36/89 (40%), Gaps = 6/89 (6%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A+ +++N+ S ++ +GV+IG++A+ ++ + + G + + G
Sbjct: 11 SLRIAFTQIWANKMR------SALTALGVIIGIVAVTLMGTAIKGIDVGVDRSFSGFGDD 64
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKV 96
V+ K+ + R
Sbjct: 65 VLYVTKWPWHEIDDWWNYRNRRPIRFEYA 93
>gi|307150352|ref|YP_003885736.1| DevC protein [Cyanothece sp. PCC 7822]
gi|306980580|gb|ADN12461.1| DevC protein [Cyanothece sp. PCC 7822]
Length = 388
Score = 37.1 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 30/261 (11%), Positives = 74/261 (28%), Gaps = 17/261 (6%)
Query: 2 SIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+F++ + AWR L + + + G+ + + V ++ F+E +
Sbjct: 4 KLFAKTPL--AWRQLTKQKTRFLV------AIAGITFADLLMFVQLA----FQEALYDSA 51
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ + + + + + L + +
Sbjct: 52 IKPLRSLQGDLVLINPQFQTLFSVKSFSRERLYQSLAYQGVASVNPVYIGTAQWRNPETR 111
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
++ + + I ++ + I + +
Sbjct: 112 IERAILVWGVEPAQPTFTFNEVNQNLDQLKILNNV-LYDQAGRPEYGEIAQSWHKSGTLE 170
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIE---VFVKDPDAIE 238
I K+ +V G+F + +G V S F E IE + +K +E
Sbjct: 171 TEINGKTISVKGLFTLGASFAADGNVITSDSTFLSIF-PERQKDRIEVGLITLKPGANLE 229
Query: 239 KTHENIVRILGNGVVVIDWQQ 259
T + L + V V+ ++
Sbjct: 230 ATQAQLEAGLPDDVQVLTVEE 250
>gi|301165911|emb|CBW25484.1| putative ABC transport system, membrane protein [Bacteriovorax
marinus SJ]
Length = 402
Score = 37.1 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 47/279 (16%), Positives = 91/279 (32%), Gaps = 31/279 (11%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + +L F + G + ++ + +M+GF + +
Sbjct: 1 MFQSTLLKL---FLSDKGTRRF----AIGVVFGFAFSIAVILGNIGIMDGFEGALRTGLK 53
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
NG + I +Y ++ + L+ + + GV ++GI
Sbjct: 54 KSNGDLTIHSRYGFFDFESYLKHELELANINTFTS--IVQTEGFVIKNEVSKGVQIKGIE 111
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
F + V++G +LA L + GD I + G+ G
Sbjct: 112 EESFKKVTGLDI---------TLEDNEVVLGLELANFLKVKKGDPIVLAFANGNSQVSG- 161
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV--------FVKDP 234
K Y V D +Y+ Q N+EN V+ I + F+KDP
Sbjct: 162 LPSLKRYQVASTISHGIYQRDLRTLYIKKNILQSDLNVENRVNLISLNISSDENDFLKDP 221
Query: 235 ----DAIEKTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
IEK + +G +V + + + + +
Sbjct: 222 VGYSLKIEKVIDGFKGSIGRSYIVKPYWREFITLITAVK 260
>gi|49478827|ref|YP_038974.1| permease [Bacillus thuringiensis serovar konkukian str. 97-27]
gi|49330383|gb|AAT61029.1| conserved hypothetical protein, possible permease [Bacillus
thuringiensis serovar konkukian str. 97-27]
Length = 858
Score = 37.1 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 32/247 (12%), Positives = 73/247 (29%), Gaps = 19/247 (7%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
R+ + A + + N + + + +GVM+ M L+ SV +E ++ R
Sbjct: 1 MMRWVIKYAVKSMKQNWLRNML--IALGAALGVMLATMLLLGNQSVEKSVKEQVVSRY-- 56
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ ++ + +D + + K+ + F + G +
Sbjct: 57 GDYNLQFGYIKNDMYLNNESLKGIDGLENAEKISKVLIPYPFPNYKELSGKPSYWGVEQD 116
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
S + Y + KG + + +
Sbjct: 117 SPEMHSYKILEGRYPKDGAEVALTKGY---------------TERENIRLGDTIKLPFPQ 161
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
K+ V+G+ Y +Q Q NL N + ++V D + +
Sbjct: 162 HGEKTVKVVGILNPPLMAAMGHGAYFPIQWLQKELNLPNQFNLVQVKTADVNVKRAIALD 221
Query: 244 IVRILGN 250
+ + + N
Sbjct: 222 VNKKIEN 228
>gi|301308201|ref|ZP_07214155.1| putative ABC transporter, permease protein [Bacteroides sp. 20_3]
gi|300833671|gb|EFK64287.1| putative ABC transporter, permease protein [Bacteroides sp. 20_3]
Length = 424
Score = 37.1 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 30/224 (13%), Positives = 69/224 (30%), Gaps = 7/224 (3%)
Query: 13 WRYLFSN-RKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
+R ++S +KN + + S V G+ LIV++ NG R ++ ++ + V
Sbjct: 7 FREIWSTIKKNKLRTFLTGFS---VSWGIFMLIVLLGAGNGLRNGIMYNFRNMSTNRVEV 63
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
Y ++ + + + V S+ S + + N
Sbjct: 64 WTRYTTKPWKGMQSNRSISFKEEDLGALKRDFKEVDLCSATISHNDTITYNEEYVTGQTN 123
Query: 132 SFSRFYGNVSNDFDRGKGVII--GKDLARNLGISIGDKINILSPYGDVTPMGMGIR-SKS 188
+ ++ +D+ + + + D P+G ++
Sbjct: 124 GVYPDHAPINYVNVETHNGRFINEQDMRDRRKVIVISPRMAEVLFRDEKPLGKYVKCGNM 183
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK 232
+ +N Y+ AQL +N + +K
Sbjct: 184 MYQVVGVYNDDDKSNNAPAYIPFSVAQLLYNKGYGFGSLTFTLK 227
>gi|302879272|ref|YP_003847836.1| hypothetical protein Galf_2067 [Gallionella capsiferriformans
ES-2]
gi|302582061|gb|ADL56072.1| protein of unknown function DUF214 [Gallionella capsiferriformans
ES-2]
Length = 399
Score = 37.1 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 24/41 (58%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
SF++ +G+ IG+ A+I++ S+ G + ++ +++
Sbjct: 21 SFLTALGIAIGITAVILLTSIGEGLHQFVLSEFSQFGTNLI 61
>gi|153812838|ref|ZP_01965506.1| hypothetical protein RUMOBE_03245 [Ruminococcus obeum ATCC 29174]
gi|149831050|gb|EDM86139.1| hypothetical protein RUMOBE_03245 [Ruminococcus obeum ATCC 29174]
Length = 1280
Score = 36.7 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 38/244 (15%), Positives = 67/244 (27%), Gaps = 22/244 (9%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
F + R LF +K F ++ G+ G MAL++ V G R+ + V
Sbjct: 902 NFTWKSSLRNLFRYKKRLF------MTIFGIA-GSMALML---VGFGIRDSVSDIVHLQY 951
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
++ D + + L L + + +
Sbjct: 952 TNLQHYDATIIS----------DDDATDTEREALIESLDKNESLDHYTKIRLSKLTAPNG 1001
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
S L + D + K S G + +
Sbjct: 1002 KSNLSVYVFVPENLENFKKDVTLRNRVTKKEYELPEDGAAVCEKTASLLGLKPGDELTLE 1061
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP--DAIEKTHEN 243
+ +Y VYM+ Q + F E I VK+ D +EK +
Sbjct: 1062 KDDKEYHVKISVITENYAGHYVYMTPQIYKETFGEEPVYEDIVFSVKEEYKDRVEKVGQK 1121
Query: 244 IVRI 247
I+ +
Sbjct: 1122 IMDL 1125
>gi|145296983|ref|YP_001139804.1| hypothetical protein cgR_2882 [Corynebacterium glutamicum R]
gi|140846903|dbj|BAF55902.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 421
Score = 36.7 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+++A L SN+ + ++ +GV+IG+ ++I ++++ ++ +
Sbjct: 6 SILLALTSLRSNKMR------ALLTLLGVIIGIASVIGILTIGKALQDQTLNS 52
>gi|19554187|ref|NP_602189.1| ABC-type transporter, permease component [Corynebacterium
glutamicum ATCC 13032]
gi|62391841|ref|YP_227243.1| ABC-type transport system, involved in lipoprotein release,
permease component [Corynebacterium glutamicum ATCC
13032]
gi|21325766|dbj|BAC00387.1| ABC-type transporter, permease components [Corynebacterium
glutamicum ATCC 13032]
gi|41222988|emb|CAF18933.1| ABC-type transport system, involved in lipoprotein release,
permease component [Corynebacterium glutamicum ATCC
13032]
Length = 421
Score = 36.7 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+++A L SN+ + ++ +GV+IG+ ++I ++++ ++ +
Sbjct: 6 SILLALTSLRSNKMR------ALLTLLGVIIGIASVIGILTIGKALQDQTLNS 52
>gi|262382560|ref|ZP_06075697.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|262295438|gb|EEY83369.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 424
Score = 36.7 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 30/224 (13%), Positives = 69/224 (30%), Gaps = 7/224 (3%)
Query: 13 WRYLFSN-RKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
+R ++S +KN + + S V G+ LIV++ NG R ++ ++ + V
Sbjct: 7 FREIWSTIKKNKLRTFLTGFS---VSWGIFMLIVLLGAGNGLRNGIMYNFRNMSTNRVEV 63
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
Y ++ + + + V S+ S + + N
Sbjct: 64 WTRYTTKPWKGMQSNRSISFKEEDLGALKRDFKEVDLCSATISHNDTITYNEEYVTGQTN 123
Query: 132 SFSRFYGNVSNDFDRGKGVII--GKDLARNLGISIGDKINILSPYGDVTPMGMGIR-SKS 188
+ ++ +D+ + + + D P+G ++
Sbjct: 124 GVYPDHAPINYVNVETHNGRFINEQDMRDRRKVIVISPRMAEVLFRDEKPLGKYVKCGNM 183
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK 232
+ +N Y+ AQL +N + +K
Sbjct: 184 MYQVVGVYNDDDKSNNAPAYIPFSVAQLLYNKGYGFGSLTFTLK 227
>gi|167760999|ref|ZP_02433126.1| hypothetical protein CLOSCI_03397 [Clostridium scindens ATCC 35704]
gi|167661378|gb|EDS05508.1| hypothetical protein CLOSCI_03397 [Clostridium scindens ATCC 35704]
Length = 405
Score = 36.7 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 38/246 (15%), Positives = 69/246 (28%), Gaps = 2/246 (0%)
Query: 12 AWRYLFSNRKNAFISIASFI-SFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
A RYL R I + ++ V L + +E +V+
Sbjct: 7 AIRYLARKRSKTAILFLVLFVAETMILCTVTILRASEEAKSSLQEKTKSKVIAEISDKDH 66
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
+ D V + + S + +S S
Sbjct: 67 LITTEDINAIFNFDGVKDINKMAKSQCCPVGFRLYTGNQDSTKENSQAQVVSYDSLSADG 126
Query: 131 NSFSRFYGNVSNDFDRGKGVII-GKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
+ DF K I+ ++LA +GD + + + G+ + S
Sbjct: 127 PFAEGQIRLIKGDFPEDKNEIVVNQNLAEMNQWELGDTVLLKNDAGEKINAVISGLYLSG 186
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
T + Y + E L + V+VK+P+ + + I R LG
Sbjct: 187 TESKQTKSTLAVYRIENTIYGMPELALKLQRQKGFESASVYVKNPEQLTSIEQQISRKLG 246
Query: 250 NGVVVI 255
V +
Sbjct: 247 KKVELT 252
>gi|322688684|ref|YP_004208418.1| hypothetical protein BLIF_0496 [Bifidobacterium longum subsp.
infantis 157F]
gi|320460020|dbj|BAJ70640.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis 157F]
Length = 529
Score = 36.7 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 8/52 (15%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+ + + L+ + + ++ +GV++G ++++++S+ G E K
Sbjct: 7 LRLCRQNLWRRKSR------TILTVLGVIVGCCSIVLMVSLGQGINEQNEKM 52
>gi|229136066|ref|ZP_04264822.1| ABC transporter, ATP-binding protein [Bacillus cereus BDRD-ST196]
gi|228647387|gb|EEL03466.1| ABC transporter, ATP-binding protein [Bacillus cereus BDRD-ST196]
Length = 393
Score = 36.7 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 25/244 (10%), Positives = 75/244 (30%), Gaps = 10/244 (4%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A + +++ S ++ +G++IGV ++I V+++ G + + +G V
Sbjct: 2 KIALSSILAHKLR------SALTMLGIIIGVGSIITVVAIGQGGEAALKSQFVGSGNQTV 55
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ D +A + +++ S + + +
Sbjct: 56 PIHYSADMNDPFGMAMVEAPKITEEDIFEIKKIPDIAHVVTTNSSMEPLDIEDKIEMVSI 115
Query: 130 QNSFSRFYGNVSNDFDRGKGVI---IGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
S ++ +G+ + + + + + + M +
Sbjct: 116 TGLDSEYFSVNKVKLLKGRSLQESDVDQGNNVVMISKQMEDKVFKDANPVGKIIEMKGQP 175
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ F + + + ++ + I V K+ D +EK +
Sbjct: 176 MQIIGVYKSDNEFMGMGPSEALVPISLWPTLYG-KDEIQNISVQAKNVDNLEKAGKKAAD 234
Query: 247 ILGN 250
+L +
Sbjct: 235 VLNS 238
>gi|317483578|ref|ZP_07942559.1| SalY-type ABC antimicrobial peptide transport system permease
component [Bifidobacterium sp. 12_1_47BFAA]
gi|316914974|gb|EFV36415.1| SalY-type ABC antimicrobial peptide transport system permease
component [Bifidobacterium sp. 12_1_47BFAA]
Length = 528
Score = 36.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 8/52 (15%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+ + + L+ + + ++ +GV++G ++++++S+ G E K
Sbjct: 7 LRLCRQNLWRRKSR------TILTVLGVIVGCCSIVLMVSLGQGINEQNEKM 52
>gi|312133146|ref|YP_004000485.1| saly-type abc antimicrobial peptide transport system permease
component [Bifidobacterium longum subsp. longum BBMN68]
gi|311772341|gb|ADQ01829.1| SalY-type ABC antimicrobial peptide transport system permease
component [Bifidobacterium longum subsp. longum BBMN68]
Length = 526
Score = 36.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 8/52 (15%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+ + + L+ + + ++ +GV++G ++++++S+ G E K
Sbjct: 7 LRLCRQNLWRRKSR------TILTVLGVIVGCCSIVLMVSLGQGINEQNEKM 52
>gi|255038606|ref|YP_003089227.1| hypothetical protein Dfer_4861 [Dyadobacter fermentans DSM 18053]
gi|254951362|gb|ACT96062.1| protein of unknown function DUF214 [Dyadobacter fermentans DSM
18053]
Length = 798
Score = 36.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 24/254 (9%), Positives = 63/254 (24%), Gaps = 16/254 (6%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVM---SVMNGFREDMIK 59
+ + + +A R ++ N+ + I+I G+ +G+ A IV+M S F K
Sbjct: 1 MLRNY-LKIALRNIWKNKAFSAINIV------GLAVGMAACIVIMLFVSYERSFDRMHSK 53
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
+ +N V + +V FV +
Sbjct: 54 HIFRLNEVQTFDGMTSQNVALSMYPMGPTLKQEFSEVKSFVRINGTGKMPVFYNGKRVEL 113
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
S + F + + + + + + +
Sbjct: 114 NQSFLTDPDFFSMFDFKLEEGDSRKVLTEPNSVVLTRTTVSKLFGNEDAIGRNIHLYAND 173
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+ + D ++ + + + +E+ A +
Sbjct: 174 TLTLKVTGIMEDVPGNSHLQFDALVSFNTIAKPDFMENWGSNYLNTYLEL------AAQT 227
Query: 240 THENIVRILGNGVV 253
+ + +
Sbjct: 228 DVAALEKKFPAYLK 241
>gi|225016921|ref|ZP_03706113.1| hypothetical protein CLOSTMETH_00834 [Clostridium methylpentosum
DSM 5476]
gi|224950315|gb|EEG31524.1| hypothetical protein CLOSTMETH_00834 [Clostridium methylpentosum
DSM 5476]
Length = 823
Score = 36.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 28/262 (10%), Positives = 66/262 (25%), Gaps = 20/262 (7%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+AW +F ++K A + S I + V +++ + V N + + N +
Sbjct: 413 MAWHNIFRDKKRAVVVFLSLFLGITTFLSVNMVVLSLDVENYLDQYSAHDFVLTNKTAAV 472
Query: 71 QQKYYPLVDYQ----------FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + ++ V+ F +
Sbjct: 473 GSETETEQKFNPAFLAALRELDGIEKMHLRTKESCVIQFDEAVFGRGFEAFCNQWGASYA 532
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGIS--------IGDKINILS 172
+ G + + + R+ ++ L
Sbjct: 533 EQKQSIEQNPEFYWALLGGADEETVEQLEAETEQVIDRDAFERGETVLLETRQSELYNLG 592
Query: 173 PYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK 232
+T G + + +++S E F+ + IE+
Sbjct: 593 DPVQITVNGQVRNYRIGGFVSGTLQFREGGSAPNLFVSESELARIFDDP-IIDRIELD-A 650
Query: 233 DPDAIEKTHENIVRILGNGVVV 254
D E I ++GN +
Sbjct: 651 DRSKSEAILAEIQALVGNDNQI 672
>gi|88808600|ref|ZP_01124110.1| possible ABC transporter [Synechococcus sp. WH 7805]
gi|88787588|gb|EAR18745.1| possible ABC transporter [Synechococcus sp. WH 7805]
Length = 409
Score = 36.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A L +NR S ++ +G++IG ++I ++ V G + ++ + +V+
Sbjct: 13 MALTTLRANRLR------SLLTMLGIVIGNASVITLVGVGRGAQNLAESQLSTLGANVLF 66
Query: 71 QQKYYPLVDYQ 81
Q
Sbjct: 67 VVPGNNDTRRQ 77
>gi|229105856|ref|ZP_04236483.1| ABC transporter, ATP-binding protein [Bacillus cereus Rock3-28]
gi|229118744|ref|ZP_04248095.1| ABC transporter, ATP-binding protein [Bacillus cereus Rock1-3]
gi|228664712|gb|EEL20203.1| ABC transporter, ATP-binding protein [Bacillus cereus Rock1-3]
gi|228677577|gb|EEL31827.1| ABC transporter, ATP-binding protein [Bacillus cereus Rock3-28]
Length = 393
Score = 36.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 24/244 (9%), Positives = 75/244 (30%), Gaps = 10/244 (4%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A + +++ S ++ +G++IGV ++I V+++ G + + +G V
Sbjct: 2 KIALSSILAHKLR------SALTMLGIIIGVGSIITVVAIGQGGEAALKSQFVGSGNQTV 55
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ D + + +++ S + + +
Sbjct: 56 PIHYSADMNDPFGMGMVEAPKITEEDIFEIKKIPEISHVVTTNSSMEPLDIEDKVEMVSI 115
Query: 130 QNSFSRFYGNVSNDFDRGKGVI---IGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
S ++ +G+ + + + + ++ + M +
Sbjct: 116 TGLDSEYFSVNKVKLLKGRSLQESDVDQGNNVVMISKQMEEKVFKDANPVGKIIEMKGQP 175
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ F + + + ++ + I V K+ D +EK +
Sbjct: 176 MQIIGVYKSDNEFMGMGPSEALIPISLWPTLYG-KDEIQNISVQAKNVDNLEKAGKKAAD 234
Query: 247 ILGN 250
+L +
Sbjct: 235 VLNS 238
>gi|227546306|ref|ZP_03976355.1| antimicrobial peptide ABC superfamily ATP binding cassette
transporter, permease protein [Bifidobacterium longum
subsp. infantis ATCC 55813]
gi|227213287|gb|EEI81159.1| antimicrobial peptide ABC superfamily ATP binding cassette
transporter, permease protein [Bifidobacterium longum
subsp. infantis ATCC 55813]
Length = 519
Score = 36.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 8/52 (15%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+ + + L+ + + ++ +GV++G ++++++S+ G E K
Sbjct: 7 LRLCRQNLWRRKSR------TILTVLGVIVGCCSIVLMVSLGQGINEQNEKM 52
>gi|146180786|ref|XP_001021487.2| IBR domain containing protein [Tetrahymena thermophila]
gi|146144354|gb|EAS01242.2| IBR domain containing protein [Tetrahymena thermophila SB210]
Length = 763
Score = 36.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 15/173 (8%), Positives = 40/173 (23%), Gaps = 5/173 (2%)
Query: 46 VMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAF 105
V S+M GF + K +N + +++ + + +
Sbjct: 281 VESIMQGFDAKIQKYHRILNRNKILKNPNNKFCTKPDCEGYITLDSSSSQPFQLCNICQT 340
Query: 106 VSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIG 165
+ S + +Q + + + + G +
Sbjct: 341 EICVKCFSQWHPRVSCSQNMEKNIQKYIEKNVVQLCPNCKIKIEKMTGCNHITCSFCKHE 400
Query: 166 DKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF 218
S Y F + D+ +Y+ +++
Sbjct: 401 WCWLCKSKYSRSHFEKFNPI-----GCPGFYKQKQDWPIYKIYLYRFFCLIFW 448
>gi|261404718|ref|YP_003240959.1| hypothetical protein GYMC10_0852 [Paenibacillus sp. Y412MC10]
gi|261281181|gb|ACX63152.1| protein of unknown function DUF214 [Paenibacillus sp. Y412MC10]
Length = 431
Score = 36.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 28 ASFISFIGVMIGVMALIVVMSVMNGFREDMI 58
+ + G+ IG A+IV +S+ NG + +
Sbjct: 2 VTALCMTGISIGCAAIIVAISIGNGAQSYLE 32
>gi|322388106|ref|ZP_08061712.1| ABC superfamily ATP binding cassette transporter, membrane
protein [Streptococcus infantis ATCC 700779]
gi|321141127|gb|EFX36626.1| ABC superfamily ATP binding cassette transporter, membrane
protein [Streptococcus infantis ATCC 700779]
Length = 419
Score = 36.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 10/64 (15%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ A+ + +++ +F ++ IG++IGV +++V+M++ + + K + +
Sbjct: 4 LKFAFSSIMAHKMRSF------LTMIGIIIGVSSVVVIMALGDSMSRQVNKTMTKSQKDI 57
Query: 69 VIQQ 72
+
Sbjct: 58 HVFF 61
>gi|149275738|ref|ZP_01881883.1| putative ABC transporter permease [Pedobacter sp. BAL39]
gi|149233166|gb|EDM38540.1| putative ABC transporter permease [Pedobacter sp. BAL39]
Length = 794
Score = 36.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 10/49 (20%), Positives = 24/49 (48%), Gaps = 7/49 (14%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMN 51
+F + +A R ++ N+ I+ +G+ IG+ + I++ +N
Sbjct: 1 MF-KLNFKIAMRNIWKNKGYTLIN------VLGLSIGMASCILIFLFIN 42
>gi|23465701|ref|NP_696304.1| hypothetical protein BL1133 [Bifidobacterium longum NCC2705]
gi|23326381|gb|AAN24940.1| protein with weak similarity to components of ABC transporter
[Bifidobacterium longum NCC2705]
Length = 529
Score = 36.7 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 8/52 (15%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+ + + L+ + + ++ +GV++G ++++++S+ G E K
Sbjct: 7 LRLCRQNLWRRKSR------TILTVLGVIVGCCSIVLMVSLGQGINEQNEKM 52
>gi|325288465|ref|YP_004264646.1| protein of unknown function DUF214 [Syntrophobotulus glycolicus DSM
8271]
gi|324963866|gb|ADY54645.1| protein of unknown function DUF214 [Syntrophobotulus glycolicus DSM
8271]
Length = 393
Score = 36.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 26/239 (10%), Positives = 65/239 (27%), Gaps = 3/239 (1%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +AWR L +++ + IG+ + V +++ SV G + + +
Sbjct: 3 LRIAWRDLLQKPLQYTLTVIVAAAAIGLSLAV--ILIAASVRQGMVNAALPFDMIVGAKG 60
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
Q + + Q +++ + G + D
Sbjct: 61 SPTQLIFNTIFLQDAPVGNISNAIHERLVKDERTAKVIPFAFGDNYGGHRIVGTTGDIFQ 120
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
L+ S + A G + +T
Sbjct: 121 LRPSLQEKPIFALQEGRLFAEEHEVVVGAVAAGKLRLQIGDSFKASHGLTAALEHSEHDE 180
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA-VSGIEVFVKDPDAIEKTHENIVR 246
V+ + + ++ ++ +N V+ + V KD + + ++ I
Sbjct: 181 DYVVVGILEKMNRPYDDGIFTPIESVWEMHGNKNRDVTALMVTPKDYAGLMQMYQEINS 239
>gi|268608323|ref|ZP_06142050.1| ABC-type transport system, involved in lipoprotein release,
permease component [Ruminococcus flavefaciens FD-1]
Length = 420
Score = 36.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+++A L SN+ S ++ +G++IG+ ++I +M + G +
Sbjct: 6 ILLALSELKSNKMR------SLLTMLGIVIGIASVISIMIMGEGMKRTTAD 50
>gi|160881820|ref|YP_001560788.1| hypothetical protein Cphy_3702 [Clostridium phytofermentans ISDg]
gi|160430486|gb|ABX44049.1| protein of unknown function DUF214 [Clostridium phytofermentans
ISDg]
Length = 449
Score = 36.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 9/44 (20%), Positives = 25/44 (56%), Gaps = 6/44 (13%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNG 52
+ + R LF + + ++ +G++IG ++++V++S+ G
Sbjct: 7 LKMGLRNLFRRKAR------TALTVVGMVIGTISIVVMVSIGIG 44
>gi|329929459|ref|ZP_08283193.1| efflux ABC transporter, permease protein [Paenibacillus sp. HGF5]
gi|328936347|gb|EGG32794.1| efflux ABC transporter, permease protein [Paenibacillus sp. HGF5]
Length = 431
Score = 36.7 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 28 ASFISFIGVMIGVMALIVVMSVMNGFREDMI 58
+ + G+ IG A+IV +S+ NG + +
Sbjct: 2 VTALCMTGISIGCAAIIVAISIGNGAQSYLE 32
>gi|94967590|ref|YP_589638.1| ABC efflux pump, inner membrane subunit [Candidatus Koribacter
versatilis Ellin345]
gi|94549640|gb|ABF39564.1| ABC efflux pump, inner membrane subunit [Candidatus Koribacter
versatilis Ellin345]
Length = 386
Score = 36.7 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 26/231 (11%), Positives = 59/231 (25%), Gaps = 20/231 (8%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
S IS + + I V +++++ + G D KR GI V +
Sbjct: 30 SVISIVAIAIEVTLILLIVGLSVGMLNDSRKRTAGIGADV-----------------MVQ 72
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
+ + ++ + + S YG
Sbjct: 73 PPNASALSTFSTASVPIKVAGALEKLPHVIAAVPVVMSTNTSGSIEVIYGIDLTAGSPYN 132
Query: 149 GVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMV- 207
G+ G ++L + + + + FR+ +
Sbjct: 133 FDNTGRPFRYIAGGPFQGPNDMLVDDYFASDKHVKVGDQLELFNHKFRVSGIVENGKGAR 192
Query: 208 -YMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG-NGVVVID 256
++ + Q +E S + + +P + + I G
Sbjct: 193 KFLPISTLQNLMGVEGKASMFYLRLDNPANADLVVQEIKNTPGLETYTARS 243
>gi|225866926|ref|YP_002752304.1| ABC transporter, permease component [Bacillus cereus 03BB102]
gi|225787108|gb|ACO27325.1| ABC transporter, permease component [Bacillus cereus 03BB102]
Length = 857
Score = 36.7 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 29/224 (12%), Positives = 66/224 (29%), Gaps = 17/224 (7%)
Query: 27 IASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANR 86
+ + + +GVM+ M L+ SV +E ++ R + ++ +
Sbjct: 21 LIALGAALGVMLATMLLLGNQSVEKSVKEQVVSRY--GDYNLQFGYIKNDMYLNNESLKG 78
Query: 87 LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDR 146
+D + + K+ + F + G +S + Y +
Sbjct: 79 IDGLENAEKISKVLIPYPFPNYKELSGKPSYWGVEQDSPEMHSYKILEGRYPKDGAEVAL 138
Query: 147 GKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGM 206
KG + + + K+ V+G+
Sbjct: 139 TKGY---------------TERENIRLGDTIKLPFPQHGEKTVKVVGILNPPLMAAMGHG 183
Query: 207 VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN 250
Y +Q Q NL N + ++V D + ++ + + N
Sbjct: 184 AYFPIQWLQKELNLPNQFNLVQVKTADVNVKRTIALDVNKKIEN 227
>gi|167383682|ref|XP_001736627.1| Apyrase precursor [Entamoeba dispar SAW760]
gi|165900885|gb|EDR27110.1| Apyrase precursor, putative [Entamoeba dispar SAW760]
Length = 362
Score = 36.7 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 29/209 (13%), Positives = 58/209 (27%), Gaps = 1/209 (0%)
Query: 21 KNAFISIASFISFIGVM-IGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVD 79
K I++ +S I + IG +++I +S+ N F+ ++ + + D
Sbjct: 10 KVNVITMVVVLSIIVISTIGFVSVITGLSIQNTFKYPIVLDNYQSYEKEMKSINIGMISD 69
Query: 80 YQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGN 139
+ + I + + S + + + L
Sbjct: 70 DDELTKYGNDYYCQIYLGKIHITDKGWEYEETSHSKFISKFNKGKRGNELSELVWYNKKL 129
Query: 140 VSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRF 199
D G G I D I ++ N + G G +
Sbjct: 130 YGFDDKTGIGYEINIDRQELYPRIIFNEGNGSTESGMKVEWGTVYNDEMIVGSQGNIHVN 189
Query: 200 PDYDNGMVYMSLQEAQLYFNLENAVSGIE 228
D Y+ QL +E+ + E
Sbjct: 190 GIDDYSNSYIYHINTQLEKRVESWIDKYE 218
>gi|222096674|ref|YP_002530731.1| permease, putative [Bacillus cereus Q1]
gi|221240732|gb|ACM13442.1| permease, putative [Bacillus cereus Q1]
Length = 850
Score = 36.7 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 41/253 (16%), Positives = 79/253 (31%), Gaps = 19/253 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ A R L NR F + ++IGV + F M+ ++ + H
Sbjct: 3 LKSALRSLARNRLRTF------FTVFSILIGVASF---------FSMSMLVELVPRSIHE 47
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ V Q +D + + Q ++ G S V + S
Sbjct: 48 SSKILLGGDVSVQSYLKPMDR--ETLISSIPKEEQKALTTSLLGQSMVKSDRKTTSLIVK 105
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ + + + L++N + K+ + + M S
Sbjct: 106 GIETNHYPFFGDNLFPNIRTLHKDELLLSKNTADRLQVKVGDRVEIPNRSTGAMTSYKIS 165
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHENIVRI 247
V G+ G Y+ L +AQ N+ ++ + + + I +NI +
Sbjct: 166 GLVEGVQESYGDASIFGTAYLHLDQAQQLLNVPAGTINEALILLNENVNISSFKKNIQKQ 225
Query: 248 LGNGVVVIDWQQR 260
L VID Q +
Sbjct: 226 LPQS-SVIDVQDK 237
>gi|227539692|ref|ZP_03969741.1| ABC superfamily ATP binding cassette transporter permease
[Sphingobacterium spiritivorum ATCC 33300]
gi|227240334|gb|EEI90349.1| ABC superfamily ATP binding cassette transporter permease
[Sphingobacterium spiritivorum ATCC 33300]
Length = 804
Score = 36.7 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 17/222 (7%), Positives = 54/222 (24%), Gaps = 3/222 (1%)
Query: 27 IASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANR 86
+ + ++ IG+ +GV +I+ + N ++ V + D + ++
Sbjct: 18 VFTILTLIGLTLGVTGVILSLLYWN---DEHAYNKWNPEKDKVFEVMTNISEDMMWNSSP 74
Query: 87 LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDR 146
+P +++ + + + +
Sbjct: 75 GPLVPILMEKSNEIESYCQYRAYYFDQYFKVNGKTEILTKTINTQGSFFEFFPFEIVQGS 134
Query: 147 GKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGM 206
++ +P + V + +
Sbjct: 135 VCQFSSSQNTMALEESEAKRIFGTANPIDQIITTDNKESYVVTAVYRIPGKSSIAPNAVY 194
Query: 207 VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
M + + + + + +KDP + + I I
Sbjct: 195 TAMEKDIKRKANSWGDFEFTVLLKLKDPAKRDLVKKQIDEIY 236
>gi|260783923|ref|XP_002587020.1| hypothetical protein BRAFLDRAFT_103836 [Branchiostoma floridae]
gi|229272154|gb|EEN43031.1| hypothetical protein BRAFLDRAFT_103836 [Branchiostoma floridae]
Length = 662
Score = 36.7 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNG 52
+AWRYL S+R + + V + + L+ V+S+++G
Sbjct: 329 LAWRYLRSHRSEQHSGAVLDKALLSVALFGVFLLAVLSLISG 370
>gi|198276916|ref|ZP_03209447.1| hypothetical protein BACPLE_03121 [Bacteroides plebeius DSM 17135]
gi|198270441|gb|EDY94711.1| hypothetical protein BACPLE_03121 [Bacteroides plebeius DSM 17135]
Length = 416
Score = 36.7 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 19/206 (9%), Positives = 62/206 (30%), Gaps = 2/206 (0%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFRE--DMIKRVLGINGHVVIQQKYYPLVDYQFIANR 86
+ ++ V G+ LIV++ NG + + + +N +
Sbjct: 19 TLLTGFSVAWGIFMLIVLLGAGNGLIHAFENQSKGMIMNSMKIYPGTTSQPYKGMKEGRS 78
Query: 87 LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDR 146
+ ++ + ++ G ++ S N Y ++ +
Sbjct: 79 IYLKESDRELTATSFPDHIIHTGATVSKGDVILTYGKEAVSIGINGVFPNYPSLEAIKIK 138
Query: 147 GKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGM 206
+ +D+ I + + + + + +P+G + ++ + + +
Sbjct: 139 EGRFVNARDMEERRKIIVLHEKTVKNLFPHTSPIGKYLNAQGVPYQVVGIYTDQNSFSPS 198
Query: 207 VYMSLQEAQLYFNLENAVSGIEVFVK 232
+ Q + +++ I K
Sbjct: 199 ALVPFTTLQTIYQKGDSIDNITFTTK 224
>gi|124006973|ref|ZP_01691802.1| signaling protein without kinase domain [Microscilla marina ATCC
23134]
gi|123987426|gb|EAY27146.1| signaling protein without kinase domain [Microscilla marina ATCC
23134]
Length = 379
Score = 36.7 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 25/253 (9%), Positives = 63/253 (24%), Gaps = 9/253 (3%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++F + R+ + R F + +G+ V L+ G M +
Sbjct: 83 MTMFYVNYKYIVARHFRARRFKKFALYIFLLWMVGI---VCLLVDSYLWYAGLNFTMGDK 139
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + F I +I Q + +++
Sbjct: 140 HRPWTTKIWTNRIIGATFISFFYLWSSTQIRIMIDWFRSAEVQKELENQRLKAELSMLKL 199
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ F + + + + + L + +K+++ +
Sbjct: 200 QVSPHFLFNTLNNIYALAFQQRPQAPEAILKLSDIMRYMLYEANAEKVSLQKEITYIQNF 259
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMV------YMSLQEAQLYFNLENAVSGIEVFVKDP 234
+ + F + + + +V I++ V D
Sbjct: 260 IDLNKLRLRHTEVHFNLCGDYIGKQIAPMLLLPLVENAFKYGVSAKNPSVIDIDLKVADN 319
Query: 235 DAIEKTHENIVRI 247
I T I +
Sbjct: 320 QLIFSTQNQIFQQ 332
>gi|115449417|ref|XP_001218601.1| predicted protein [Aspergillus terreus NIH2624]
gi|114187550|gb|EAU29250.1| predicted protein [Aspergillus terreus NIH2624]
Length = 638
Score = 36.7 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 21/232 (9%), Positives = 63/232 (27%), Gaps = 15/232 (6%)
Query: 28 ASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRL 87
+ +S +GV++GV + + ++ I+++ N + + + Y
Sbjct: 1 MAVLSVLGVVLGVT---ISTAWSQTLTDEKIQKM--GNNTLFTRWRPYSHFLAPAGWMND 55
Query: 88 DFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRG 147
P + + ++ D + + ++ +
Sbjct: 56 PCGPMYDPAEGLYHMHYQFNPNHVNWGNISWGHATSPDLLTWTDVDNSPTDGLAAWKNGQ 115
Query: 148 KGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMV 207
++ +L + + G+ ++ R P
Sbjct: 116 AQSLVTTNLTSDHHDPALYNHLGIFSGTAQPVNLSGVSDGTFLAFYTSVSRLPTSYTLPY 175
Query: 208 YMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQ 259
+ L ++ + V+ E + +P I+ G + W+
Sbjct: 176 LNGTESQSLAYSTDGGVTWQE-YENNP---------IIGQPPEGWNITGWRD 217
>gi|116749948|ref|YP_846635.1| hypothetical protein Sfum_2522 [Syntrophobacter fumaroxidans MPOB]
gi|116699012|gb|ABK18200.1| protein of unknown function DUF214 [Syntrophobacter fumaroxidans
MPOB]
Length = 385
Score = 36.7 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 27/252 (10%), Positives = 64/252 (25%), Gaps = 19/252 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ + +R R S ++ G+ + ++A ++ +V+N + +
Sbjct: 4 LKLIFRNTLRQRLR------SALTIFGMAVAILAFCLLQTVVNAWFAGV-SAAAPDRLIT 56
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ + L G ++ +
Sbjct: 57 RNAVSLIFPLPLSYRQKILQVDGVKRVAFGNWFGGVYIDERHFFPRMAIGGNDYFDLAPE 116
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ + G + + +G +I NI +G+ +
Sbjct: 117 MILPPDQAKAFWRRRDACIAGRKLIEKYRWKIGDAITLTGNIYPGEWRFVLVGVYTGATK 176
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
F R+ Y+ ++ + V V VKDP + I +
Sbjct: 177 SIDETQFFFRWD-------YLDETVKKIMPSRSGKVGWYVVQVKDPVQSAEVSRAIDALF 229
Query: 249 GNGVVVIDWQQR 260
N W +
Sbjct: 230 KN-----SWAET 236
>gi|284035864|ref|YP_003385794.1| hypothetical protein Slin_0944 [Spirosoma linguale DSM 74]
gi|283815157|gb|ADB36995.1| protein of unknown function DUF214 [Spirosoma linguale DSM 74]
Length = 803
Score = 36.7 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 11/45 (24%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVM 47
+F + +A+R L +R +FI+I +G+ + ++ L+ V+
Sbjct: 1 MFRNY-FTIAFRNLVKHRTYSFINIGGLA--LGIAVSLLILLFVV 42
>gi|260465491|ref|ZP_05812681.1| sodium/hydrogen exchanger [Mesorhizobium opportunistum WSM2075]
gi|259029795|gb|EEW31081.1| sodium/hydrogen exchanger [Mesorhizobium opportunistum WSM2075]
Length = 773
Score = 36.7 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 3 IFSRFEVIVAWRYLF---SNRKNAFISIASFISFIGVMIGVMALIVVM 47
+F F + R +F ++F S + I+ I +++GVMALI +
Sbjct: 252 LFMVFSFTIGRRLVFTLIRWSNDSFRSEYAVITVILIIMGVMALITNL 299
>gi|118480041|ref|YP_897192.1| ABC transporter permease [Bacillus thuringiensis str. Al Hakam]
gi|118419266|gb|ABK87685.1| ABC transporter, permease component [Bacillus thuringiensis str. Al
Hakam]
Length = 858
Score = 36.7 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 32/247 (12%), Positives = 73/247 (29%), Gaps = 19/247 (7%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
R+ + A + + N + + + +GVM+ M L+ SV +E ++ R
Sbjct: 1 MMRWVIKYAVKSMKQNWLRNML--IALGAALGVMLATMLLLGNQSVEKSVKEQVVSRY-- 56
Query: 64 INGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ ++ + +D + + K+ + F + G +
Sbjct: 57 GDYNLQFGYIKNDMYLNNESLKGIDGLENAEKISKVLIPYPFPNYKELSGKPSYWGVEQD 116
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
S + Y + KG + + +
Sbjct: 117 SPEMHSYKILEGRYPKDGAEVALTKGY---------------TERENIRLGDTIKLPFPQ 161
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
K+ V+G+ Y +Q Q NL N + ++V D + +
Sbjct: 162 HGEKTVKVVGILNPPLMAAMGHGAYFPIQWLQKELNLPNQFNLVQVKTADVNVKRTIALD 221
Query: 244 IVRILGN 250
+ + + N
Sbjct: 222 VNKKIEN 228
>gi|329939375|ref|ZP_08288711.1| putative ABC transporter permease protein [Streptomyces
griseoaurantiacus M045]
gi|329301604|gb|EGG45498.1| putative ABC transporter permease protein [Streptomyces
griseoaurantiacus M045]
Length = 433
Score = 36.7 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 24/246 (9%), Positives = 70/246 (28%), Gaps = 12/246 (4%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
+ S R + +S +G+ +G+ +I+V + + + + + + +
Sbjct: 52 IRSRRMR------AVLSALGISLGIATMILVTGIPASSQRALDRELTALGTDRLQAVADN 105
Query: 76 PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ--NSF 133
A+ ++ + V V + +S +Q
Sbjct: 106 RFAQKGETASFPKEAAAMVDRIAPVKAVTMVGNVHVKVRRSDRDHSGSSVALSVQAAQPN 165
Query: 134 SRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLG 193
N G+ LG + + P + + ++ ++V+G
Sbjct: 166 LLQVINTRVRSGHYLTAATGRFPTAVLGAAAAADLGFQDLTPGAPPPQILVDNRWFSVVG 225
Query: 194 MFR-MRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH---ENIVRILG 249
+ + V + A+ + + + + ++ + + I
Sbjct: 226 ILHGAPLAPSIDSSVLIGWDSARKILGFDGRPTQLYIQAEESEIEDVYSVLPATIAPASP 285
Query: 250 NGVVVI 255
+ V V
Sbjct: 286 DTVRVT 291
>gi|239626535|ref|ZP_04669566.1| conserved hypothetical protein [Clostridiales bacterium
1_7_47_FAA]
gi|239516681|gb|EEQ56547.1| conserved hypothetical protein [Clostridiales bacterium
1_7_47FAA]
Length = 460
Score = 36.7 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 8/48 (16%), Positives = 25/48 (52%), Gaps = 6/48 (12%)
Query: 15 YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
L + + ++ +GV+IG +++V++S+ G + ++++
Sbjct: 5 NLRRRKLR------TVLTVLGVIIGTASIVVMVSLGIGLDQMFMEQLS 46
>gi|322690670|ref|YP_004220240.1| hypothetical protein BLLJ_0479 [Bifidobacterium longum subsp.
longum JCM 1217]
gi|320455526|dbj|BAJ66148.1| conserved hypothetical protein [Bifidobacterium longum subsp.
longum JCM 1217]
Length = 519
Score = 36.7 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 8/52 (15%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+ + + L+ + + ++ +GV++G ++++++S+ G E K
Sbjct: 7 LRLCRQNLWRRKSR------TILTVLGVIVGCCSIVLMVSLGQGINEQNEKM 52
>gi|327420564|gb|AEA76356.1| 5-HT2 receptor [Aplysia californica]
Length = 992
Score = 36.7 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 38/128 (29%), Gaps = 1/128 (0%)
Query: 6 RFEVIVAWRY-LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
E + RY L++ K+ + + + + + + + I V+ V+ + +
Sbjct: 536 SLERYIGIRYPLWTKNKSKRVVLLKIVLVWTIALAITSPITVLGVVRAQNVLVDDVCVVN 595
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N H VI + I + + + Q + G + +
Sbjct: 596 NEHFVIYGSIFAFFLPLAIMILMYALTVRMLNKQARLCQTRRADDGEGEPMIRRSTSRRN 655
Query: 125 DFSYLQNS 132
+
Sbjct: 656 WQGRRKFY 663
>gi|291000040|ref|XP_002682587.1| predicted protein [Naegleria gruberi]
gi|284096215|gb|EFC49843.1| predicted protein [Naegleria gruberi]
Length = 204
Score = 36.7 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 19/195 (9%), Positives = 44/195 (22%), Gaps = 1/195 (0%)
Query: 33 FIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPD 92
+G ++GV L+ + SVM G + N + + Y+ +
Sbjct: 11 ILGSILGVTILMGIFSVMFGMASIFYQDKYEFNEERLCTVIDPRVECYRHCTTGAVGEEN 70
Query: 93 VIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVII 152
+ + + S + F+ D +
Sbjct: 71 CLVYCKAIVRVHPDDDVGYCLDEPECVHKSTQPRNRTTLEFTEHDSFYEYDIHSNVTCYL 130
Query: 153 GKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQ 212
+ I +G+ + F F +
Sbjct: 131 NEHQTNAASYQIHSSFKS-IANFVAIGLGLISLVFLAVFVIGFISTFIHRILPHHWQFKA 189
Query: 213 EAQLYFNLENAVSGI 227
Q + E+ + +
Sbjct: 190 HHQHHDEDEDNKNFL 204
>gi|313677066|ref|YP_004055062.1| hypothetical protein Ftrac_2978 [Marivirga tractuosa DSM 4126]
gi|312943764|gb|ADR22954.1| protein of unknown function DUF214 [Marivirga tractuosa DSM 4126]
Length = 415
Score = 36.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
++R+ S + + + +S +GV +G+ ++I V ++++ +++ + + VV
Sbjct: 10 SFRFALSALRANLLR--TILSLLGVTVGIFSIITVFTLVDSLEKNIKDSLNFLGDDVVRI 67
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFV 100
+K+ + + + P
Sbjct: 68 EKFPWIFGESYPWWKYVNRPKAQYSEYQF 96
>gi|302039217|ref|YP_003799539.1| putative ABC transporter permease [Candidatus Nitrospira
defluvii]
gi|300607281|emb|CBK43614.1| putative ABC-type transport system, permease component
[Candidatus Nitrospira defluvii]
Length = 410
Score = 36.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 22/41 (53%), Gaps = 6/41 (14%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNG 52
A R L N + ++ +G++IGV A++ ++S+ G
Sbjct: 11 ALRVLRRNPLR------AGLTMLGIVIGVGAVVGMVSLGQG 45
>gi|257452117|ref|ZP_05617416.1| ABC transporter permease protein [Fusobacterium sp. 3_1_5R]
gi|257466088|ref|ZP_05630399.1| ABC transporter permease protein [Fusobacterium gonidiaformans ATCC
25563]
gi|315917244|ref|ZP_07913484.1| export abc transporter permease protein [Fusobacterium
gonidiaformans ATCC 25563]
gi|317058663|ref|ZP_07923148.1| export abc transporter permease protein [Fusobacterium sp. 3_1_5R]
gi|313684339|gb|EFS21174.1| export abc transporter permease protein [Fusobacterium sp. 3_1_5R]
gi|313691119|gb|EFS27954.1| export abc transporter permease protein [Fusobacterium
gonidiaformans ATCC 25563]
Length = 408
Score = 36.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 26/257 (10%), Positives = 77/257 (29%), Gaps = 18/257 (7%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING----- 66
A+ L +++ +F ++ +G++IG+ +++ + S+ G +E + +
Sbjct: 10 AFSTLKASKMRSF------LTMLGIIIGISSVMSMWSIGRGGQEGITGNLKKNGYGKFTV 63
Query: 67 ------HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ + L + + F ++ + + +
Sbjct: 64 TVDSSKDDFRYKYLFSLSQMKDLKEEGHFKNVAAQIEEYFGIKIGEEKEGILINMSTPDY 123
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
+ + ++ + K L +IG +I I +
Sbjct: 124 EVLDPVEMMAGRNFLSFEYSPKEYVVLLDNLTAKSLFGTEKNAIGKEIEISKRRRGMNLS 183
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAV-SGIEVFVKDPDAIEK 239
+ + R+ + + Q F+ + V + I + K+P+ + +
Sbjct: 184 YRVVGVFRNPLESFIRVMKTGFFPRFARIPYQNYNYVFDKGSGVFTDILIEAKNPENLGQ 243
Query: 240 THENIVRILGNGVVVID 256
E L + +
Sbjct: 244 EMEEAKNYLEQKNQIQN 260
>gi|223935480|ref|ZP_03627397.1| protein of unknown function DUF214 [bacterium Ellin514]
gi|223895890|gb|EEF62334.1| protein of unknown function DUF214 [bacterium Ellin514]
Length = 452
Score = 36.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 19/226 (8%), Positives = 63/226 (27%), Gaps = 23/226 (10%)
Query: 14 RYLFSNRKNAFISIA-------------SFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
R+L + I S ++ +G++ GV ++I ++++ G + ++
Sbjct: 19 RFLRGMKAARMKRIIRLGVKSLWLHRLRSLLTALGIVFGVCSVIAMLAIGEGASHEAQEQ 78
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
+ N + + + +++ + + G + V+
Sbjct: 79 I--KNLGSQNIILKSLKPSEERKVSENNRQSYILQYGLTYTDIKAIKDTIPGVTVVVPGR 136
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
I + + + + + + +V +
Sbjct: 137 IMREYVWNISRQTDCEILGTVPWYPTMRNHQVAQ--------GRFFTEREMDEKANVCVI 188
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSG 226
+ S+ + + + + + E Q + V+G
Sbjct: 189 SSEMVSQLFPLQQAVGSDVRVGNAYYRVIGVMEPQSKAAKGDEVTG 234
>gi|83644075|ref|YP_432510.1| peptide ABC transporter permease [Hahella chejuensis KCTC 2396]
gi|122064323|sp|Q2SMN9|MACB_HAHCH RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|83632118|gb|ABC28085.1| ABC-type antimicrobial peptide transport system, permease component
[Hahella chejuensis KCTC 2396]
Length = 654
Score = 36.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 35/251 (13%), Positives = 80/251 (31%), Gaps = 8/251 (3%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+AW + S+R + ++ +G++IG+ A++ ++++ G ++ +I + I +
Sbjct: 263 AFKMAWVAMTSHRLR------TLLTMLGIIIGITAVVSIVAIGEGAKQKVISDINSIGVN 316
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ D + A DV + + + + N + +
Sbjct: 317 TIEIFPGKDWGDERAAAIDTLVAADVEALQAQPFVDSVTPSIVNSQQLRYRNVAVNVNIN 376
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVII-GKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ F R G V + I + + + K+ + +G
Sbjct: 377 AVGEQFFRVKGLVVAEGRPLLREDIRTQAQVVVIDSNTRGKLFAAEDDPIGKVILIGASP 436
Query: 187 KSYTVLGMFRMRFPDYDNG-MVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ + + V+M A S I V D + + I+
Sbjct: 437 WTVIGVAEDKSDMFGGGGNLSVWMPYSSATTRLIGRQNFSSIIVRTPDGLSSAVAEQGII 496
Query: 246 RILGNGVVVID 256
R+L V D
Sbjct: 497 RLLTVRHGVKD 507
>gi|89096803|ref|ZP_01169695.1| hypothetical protein B14911_14222 [Bacillus sp. NRRL B-14911]
gi|89088818|gb|EAR67927.1| hypothetical protein B14911_14222 [Bacillus sp. NRRL B-14911]
Length = 845
Score = 36.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 17/113 (15%), Positives = 37/113 (32%), Gaps = 7/113 (6%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVV-MSVMNGFREDMIK 59
M+I ++ + R+L NR+ ++I I + ++ V L V + +M +E +
Sbjct: 1 MNIINKLTL----RHLKKNRRRTLVTIIGVIISVAMVSAVSTLFVSFLGMMK--QEAIQN 54
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSG 112
+ + + + +L F D L
Sbjct: 55 SGDWHVIYRDVSESQMEAIRKDEQTEKLFFTRDRGYSSLENPSNKNRPYLFIK 107
>gi|310827215|ref|YP_003959572.1| hypothetical protein ELI_1623 [Eubacterium limosum KIST612]
gi|308738949|gb|ADO36609.1| hypothetical protein ELI_1623 [Eubacterium limosum KIST612]
Length = 418
Score = 36.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 9/65 (13%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ +A L +N+ + ++ +G++IG+ ++I + S+ + + +
Sbjct: 1 MNLLENI--KLALEGLRANKMR------ALLTMLGIIIGIASVIAITSLGDAMSNTLNET 52
Query: 61 VLGIN 65
+ +
Sbjct: 53 LSNVG 57
>gi|108762805|ref|YP_629857.1| putative permease [Myxococcus xanthus DK 1622]
gi|108466685|gb|ABF91870.1| putative permease [Myxococcus xanthus DK 1622]
Length = 430
Score = 36.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 8/40 (20%), Positives = 22/40 (55%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMS 48
+ +A+R L ++R+ + + V++GVM++ ++
Sbjct: 5 LQIAFRNLLAHRERGLLLLIVLAGASAVLVGVMSVSAGVA 44
>gi|34541306|ref|NP_905785.1| ABC transporter permease [Porphyromonas gingivalis W83]
gi|34397622|gb|AAQ66684.1| ABC transporter, permease protein, putative [Porphyromonas
gingivalis W83]
Length = 420
Score = 36.7 bits (82), Expect = 3.7, Method: Composition-based stats.
Identities = 42/239 (17%), Positives = 69/239 (28%), Gaps = 16/239 (6%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M F R I W ++SNR+ S + GV G+ L+V+ SV GF +++
Sbjct: 1 MRFFDRDRWIEIWHTIYSNRRR------SLATAFGVFWGIFMLVVLTSVGAGFSNGILRE 54
Query: 61 VLGINGHVVIQQ------KYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
V GI + Y + + I V +P V + + +
Sbjct: 55 VSGIASNSAFYWTNLTSKPYMGFRSGRNWSMTSGDIRTVRSQVPEVEFISPIMWGARSNK 114
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
V+ S + V+ R + K + I K +
Sbjct: 115 NVVFGDKSETYSIVGAEPDYFEISRVNILQGRMLNAVDDKLRRKVCMIGKEVKEKLFGTT 174
Query: 175 GDV----TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV 229
+ G+ R + VY+ Q N N V V
Sbjct: 175 DPIGQVLRVNGLYYRVIGVLEAKSNNVTIGSSPKRSVYLPYSVLQQISNSGNRVENFAV 233
>gi|259648496|dbj|BAI40658.1| antimicrobial peptide ABC transporter permease component
[Lactobacillus rhamnosus GG]
Length = 1097
Score = 36.7 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 38/230 (16%), Positives = 72/230 (31%), Gaps = 20/230 (8%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F V R +F +K F ++ GV V L ++V + ++ I
Sbjct: 716 MSFTHKVTARNIFRYKKRMF------MTIFGVAGSVTLLFSGLAVQHSIGGVNDRQFNDI 769
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ +I + + Q + F +K V + + + I
Sbjct: 770 IKYDMIVAQKDNITKNQQTSLDKLFNEKAVKKTKSVHYETVSKNAGANHDRQDITMIVPQ 829
Query: 125 DFSYLQNSFSR-FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + G II + LA+ L + +GD I + G + +
Sbjct: 830 STKNFDSYIHLATRKGQNKLTLQDNGGIISERLAKLLNVDVGDTITVKEADGTRRKVKIT 889
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKD 233
++ Y +F M+ Q FN V+G V + D
Sbjct: 890 GITEMYMGHFLF-------------MNKTAYQKAFNTNYKVNGHLVTLND 926
>gi|189464239|ref|ZP_03013024.1| hypothetical protein BACINT_00576 [Bacteroides intestinalis DSM
17393]
gi|189438029|gb|EDV07014.1| hypothetical protein BACINT_00576 [Bacteroides intestinalis DSM
17393]
Length = 419
Score = 36.7 bits (82), Expect = 3.8, Method: Composition-based stats.
Identities = 28/225 (12%), Positives = 60/225 (26%), Gaps = 8/225 (3%)
Query: 20 RKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI--NGHVVIQQKYYPL 77
++N + + + V G+ LIV++ NG + N +
Sbjct: 13 KRNKLRTFLTGFA---VAWGIFMLIVLLGAGNGIIHAFDQSSSERALNSIRIFPGWTSKP 69
Query: 78 VDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFY 137
R+ + ++ +S ++ + + Y
Sbjct: 70 YAGLKEGRRVRLENNDLEATEKFFPDHVISAGATVRQSNVNVSFGQEYVNISLMGVHPNY 129
Query: 138 GNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGM--- 194
V I DL + + K +G +G + V
Sbjct: 130 TEVETVKTADGRFINQNDLKERRKVMVIHKKTAEILFGKTHTEPIGQFVNASGVAYQIVG 189
Query: 195 FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
D + Y+ Q+ +N ++ I K+ + IE
Sbjct: 190 IYNDQGDREASEAYIPFSTLQIIYNKGEQLNNIIFTTKNLETIES 234
>gi|323467479|gb|ADX71166.1| Efflux ABC transporter, permease protein [Lactobacillus helveticus
H10]
Length = 778
Score = 36.7 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 8/61 (13%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Query: 2 SIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+ + +++ + + + + ++ IG++++ VV+S+ NGF++ + +
Sbjct: 240 KMSYWNAIKLSFTNIMTKKGR------TILTAFASSIGIISIAVVLSISNGFQKQINTTM 293
Query: 62 L 62
Sbjct: 294 S 294
>gi|152991415|ref|YP_001357137.1| peptide ABC transporter permease [Nitratiruptor sp. SB155-2]
gi|151423276|dbj|BAF70780.1| antimicrobial peptide ABC transporter, permease [Nitratiruptor sp.
SB155-2]
Length = 397
Score = 36.7 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 28/235 (11%), Positives = 64/235 (27%), Gaps = 7/235 (2%)
Query: 15 YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKY 74
YL N+K + I+ G+ +GV+ L+++ + R+ ++ + +++
Sbjct: 12 YLARNKKR------TAIAIAGIALGVLTLVLMSGISGAMRQKTLQELGTFGSRIIVITPG 65
Query: 75 YPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFS 134
+V A + + + + + + +
Sbjct: 66 NLIVFGHKSAMLGNVQTLTTSDAVAIRDKIDGVEGIALMKNATLPVSTKKRVEPREIMGV 125
Query: 135 RFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGM 194
DF G + S K + + S +
Sbjct: 126 DSAFFSLLDFTFLCGRTFTDFQKVAVIGSQTTKDFFDISCPLGQHIFIANIPFSIRGVLA 185
Query: 195 FRMRFPDYDN-GMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
R D +++ + Q N + I V K D + I +L
Sbjct: 186 ARGNIGMEDYDSTIFVPITVMQRLLTKSNWLDAIFVLSKSSDQNRFLIKQISDLL 240
>gi|305665219|ref|YP_003861506.1| ABC transporter permease [Maribacter sp. HTCC2170]
gi|88709972|gb|EAR02204.1| ABC transporter, putative permease [Maribacter sp. HTCC2170]
Length = 409
Score = 36.7 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 30/233 (12%), Positives = 74/233 (31%), Gaps = 9/233 (3%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FSR + + N+ F +S V +G++ + ++ + NG + +
Sbjct: 1 MFSRDSWKEIFETIQKNKLRTF------LSGFTVALGILIFVSLVGLTNGLQNTFDEFFN 54
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLS-SGGSGVLVRGI 121
+ + + Y+ + D + +
Sbjct: 55 DDSTNTFFIYPGRTSMPYKGYKSNRQIEFDNSDLADIKKNFPMFLQYVSPRIDRGALVKY 114
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+N +Y + S Y + +D+ + ++ ++ +G+ +G
Sbjct: 115 NNESNNYTTRAVSESYQFAEKTIIMKGRYLNLEDIKKKAKYAVVGRLVEQDLFGNKDAIG 174
Query: 182 MGIRS--KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK 232
I + V+G+F+ D + +Y+ QL + + I V K
Sbjct: 175 EYIDVSGSMFKVIGVFQDDAGDDEERRMYIPYTTRQLIEKNTDKIGHIVVGFK 227
>gi|311747454|ref|ZP_07721239.1| efflux ABC transporter, permease protein [Algoriphagus sp. PR1]
gi|126574813|gb|EAZ79184.1| efflux ABC transporter, permease protein [Algoriphagus sp. PR1]
Length = 868
Score = 36.7 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 25/249 (10%), Positives = 61/249 (24%), Gaps = 3/249 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + WR + + FIS+ +G I V L + G + +
Sbjct: 81 MIRSY-FKIGWRNILKQKGTTFISVFGLACAVGCCI-VAYLFIANIWFKGLNQPNKDEIY 138
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ ++ L F + S
Sbjct: 139 QLVYTTEEEEGMVTYGTVAEPIFDLIPDHLNNLKNQTKVLIDFPLLIQDNESFYQRSIYV 198
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ F + + + + + ++ D++ L G+ +
Sbjct: 199 DPSFMEMFKYRMEYGYSSALKEPEQVILTHQLSEKLFGDMNPIDQVLSLVVDGEEKLYHV 258
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV-FVKDPDAIEKTH 241
G + + MF + + + I+V D I+
Sbjct: 259 GGVLEDLKDMDMFNFDILVNFETHPHFLTDIPIKDAWSKELWTFIQVEKGTDISRIDSDL 318
Query: 242 ENIVRILGN 250
+ + +I
Sbjct: 319 DELTKIQNQ 327
>gi|255038602|ref|YP_003089223.1| hypothetical protein Dfer_4857 [Dyadobacter fermentans DSM 18053]
gi|254951358|gb|ACT96058.1| protein of unknown function DUF214 [Dyadobacter fermentans DSM
18053]
Length = 793
Score = 36.7 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 30/220 (13%), Positives = 67/220 (30%), Gaps = 12/220 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMA-LIVVMSVMNGFREDMIKRV 61
+ + +A+R L+ ++ + S I+ +G+ +G+ A L++ M V ++
Sbjct: 1 MLKNY-FKIAFRNLWKHK------VFSLINILGLTVGMSACLLISMYV----HFELTYDA 49
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ + + I + + + ++ G V I
Sbjct: 50 FHSKADRIYRVVTDIKTPSETIHAGITSWAYAPAMKQDFPEVESFARINGGSFLVRKGDI 109
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ + + S F G + + L+ K S T +
Sbjct: 110 KFQEEATVFADSSLFRVFDFKLVKGDPGTALKEPLSIVFTEKAAKKYFGDSDPIGQTLLL 169
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE 221
G R + M M G +++S+ FN
Sbjct: 170 SGDRLPAKVTGVMQDMPENSQIKGDMFISMATMTQRFNRG 209
>gi|21228994|ref|NP_634916.1| ABC transporter, permease protein [Methanosarcina mazei Go1]
gi|20907536|gb|AAM32588.1| ABC transporter, permease protein [Methanosarcina mazei Go1]
Length = 150
Score = 36.7 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ +A + +N+ S+++ IGV+IG+ +++ +++ F+E + + + G+ G
Sbjct: 7 LKIALNMVRANKLR------SWLTIIGVIIGIASVMAIVTTGEYFQEQVTETLEGLGGDT 60
Query: 69 VIQQKYYPLVDYQFIANRLDFIP 91
+ P Y +
Sbjct: 61 ITIVASVPFEIYSEEDMEYEENS 83
>gi|258507126|ref|YP_003169877.1| ABC transporter permease [Lactobacillus rhamnosus GG]
gi|257147053|emb|CAR86026.1| ABC transporter permease protein [Lactobacillus rhamnosus GG]
Length = 1101
Score = 36.7 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 38/230 (16%), Positives = 72/230 (31%), Gaps = 20/230 (8%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F V R +F +K F ++ GV V L ++V + ++ I
Sbjct: 720 MSFTHKVTARNIFRYKKRMF------MTIFGVAGSVTLLFSGLAVQHSIGGVNDRQFNDI 773
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ +I + + Q + F +K V + + + I
Sbjct: 774 IKYDMIVAQKDNITKNQQTSLDKLFNEKAVKKTKSVHYETVSKNAGANHDRQDITMIVPQ 833
Query: 125 DFSYLQNSFSR-FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + G II + LA+ L + +GD I + G + +
Sbjct: 834 STKNFDSYIHLATRKGQNKLTLQDNGGIISERLAKLLNVDVGDTITVKEADGTRRKVKIT 893
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKD 233
++ Y +F M+ Q FN V+G V + D
Sbjct: 894 GITEMYMGHFLF-------------MNKTAYQKAFNTNYKVNGHLVTLND 930
>gi|199599007|ref|ZP_03212415.1| ABC transporter [Lactobacillus rhamnosus HN001]
gi|199590115|gb|EDY98213.1| ABC transporter [Lactobacillus rhamnosus HN001]
Length = 1101
Score = 36.7 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 38/230 (16%), Positives = 72/230 (31%), Gaps = 20/230 (8%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F V R +F +K F ++ GV V L ++V + ++ I
Sbjct: 720 MSFTHKVTARNIFRYKKRMF------MTIFGVAGSVTLLFSGLAVQHSIGGVNDRQFNDI 773
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ +I + + Q + F +K V + + + I
Sbjct: 774 IKYDMIVAQKDNITKNQQTSLDKLFNEKAVKKTKSVHYETVSKNAGANHDRQDITMIVPQ 833
Query: 125 DFSYLQNSFSR-FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMG 183
+ + + G II + LA+ L + +GD I + G + +
Sbjct: 834 STKNFDSYIHLATRKGQNKLTLQDNGGIISERLAKLLNVDVGDTITVKEADGTRRKVKIT 893
Query: 184 IRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKD 233
++ Y +F M+ Q FN V+G V + D
Sbjct: 894 GITEMYMGHFLF-------------MNKTAYQKAFNTNYKVNGHLVTLND 930
>gi|311748338|ref|ZP_07722123.1| ABC transporter, ATP-binding protein [Algoriphagus sp. PR1]
gi|311302773|gb|EAZ81095.2| ABC transporter, ATP-binding protein [Algoriphagus sp. PR1]
Length = 415
Score = 36.7 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 39/97 (40%), Gaps = 3/97 (3%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + ++R+ + K+ + +S +GV IG+ A+I V ++++ ++
Sbjct: 2 LFFQLTWE-SFRFAITALKSNITR--TILSLLGVTIGIFAIIAVFTLVDSLENNIKSSFS 58
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPF 99
+ +V+ ++ Q F V +
Sbjct: 59 FLGTNVMRVDRFPFSSGPQEYPWWKYFRRPPGSVAEY 95
>gi|265765217|ref|ZP_06093492.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|263254601|gb|EEZ26035.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
Length = 419
Score = 36.7 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 26/224 (11%), Positives = 59/224 (26%), Gaps = 8/224 (3%)
Query: 20 RKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVD 79
++N ++ + + V G+ LIV++ NG K + + +
Sbjct: 13 KRNKLRTLLTGFA---VAWGIFMLIVLLGAGNGLIHAFEKSSSARALNSIKIYPGWTGKP 69
Query: 80 YQ--FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFY 137
Y R+ + +S +S + + +
Sbjct: 70 YDGLKEGRRIQLDNKDLDATMEHFSDNIISVGASQWQSNVNLSYGQEYVNLSLEGVYPNF 129
Query: 138 GNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK---SYTVLGM 194
V + I DL + + +G +G +
Sbjct: 130 TEVESVKSTDGRFINDIDLKERRKVIVLHTKTAEILFGKSKTEPIGKFVNAGGVSYQVVG 189
Query: 195 FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
D + Y+ Q+ +N + ++ + K IE
Sbjct: 190 LYTDPGDQGSSEAYIPFSTLQVIYNKGDKLNNLTFTTKGLTTIE 233
>gi|257464134|ref|ZP_05628516.1| ABC transporter permease protein [Fusobacterium sp. D12]
Length = 426
Score = 36.7 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 30/266 (11%), Positives = 74/266 (27%), Gaps = 29/266 (10%)
Query: 13 WRYLFSN--RKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
WR + R+ + + +F +GV + + V++ V D + + L G +
Sbjct: 3 WRMVRGTLFRQRNKMLMIAFTVALGVSLATAMMNVMLGVG-----DKVNKELKTYGANIT 57
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
+ + + + + + + + + + L
Sbjct: 58 VMHKDASILDDLYGIHGEDVSEKFLLEEEIPKVKQIFWGFNIVDFAPYLERNIE-VTGLP 116
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
+ + + G + + + +V +G + K
Sbjct: 117 DKVKIYGTWFHHHLLMPTGEELDTGIKNLKNWWEVKGEWLQEEDENVILLGSLLAGKYNY 176
Query: 191 VL----------------GMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVF---V 231
+ D+ +Y +L+ Q F LE +S +EV
Sbjct: 177 KVGDSLEVKSKNGLKKLRIKGIFNSGGEDDAGIYTNLKTVQDLFGLEGKISFLEVSALTT 236
Query: 232 KDPDAIEKTHENIVRILGNGVVVIDW 257
D D +K ++ + + W
Sbjct: 237 PDNDLAKKAAQDPNSLTISEY--ETW 260
>gi|255038593|ref|YP_003089214.1| hypothetical protein Dfer_4848 [Dyadobacter fermentans DSM 18053]
gi|254951349|gb|ACT96049.1| protein of unknown function DUF214 [Dyadobacter fermentans DSM
18053]
Length = 804
Score = 36.7 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVM 50
+F + +A R L+ ++ AFI++ + V V + + +
Sbjct: 1 MFKNY-FKIALRNLWKSKGYAFINVVG----LAVAFCVSVFLFLTAYF 43
>gi|78223608|ref|YP_385355.1| hypothetical protein Gmet_2405 [Geobacter metallireducens GS-15]
gi|78194863|gb|ABB32630.1| protein of unknown function DUF214 [Geobacter metallireducens
GS-15]
Length = 387
Score = 36.7 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 24/234 (10%), Positives = 65/234 (27%), Gaps = 15/234 (6%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
++R L++ R + + ++ G+ + V + + G R+ ++ N V+ +
Sbjct: 8 SFRNLWTRR------LTTVLTASGMALVVFVFAATLMLAEGLRKTLVDTGSYDNVVVIRK 61
Query: 72 QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQN 131
+ + + G ++V S +
Sbjct: 62 SAQTEVQSGIDRSQAAVVETQPEIAVE--------GGERLVAKEIVVLISLPKRGSGKPS 113
Query: 132 SFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTV 191
+ + ++ R + +I + R I +I +
Sbjct: 114 NVIIRGVSATSLLMRPQVKVIEGRMPRPGSAEIMAGASIAKRFKGGGIGETLRFGMRDWT 173
Query: 192 LGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
+ + ++ + + F S I ++DP + E I
Sbjct: 174 VVGIFEAGNTGFSSEIWGDVDQLMQAFRRP-VYSSIIFKLRDPSEFVRVKERIE 226
>gi|154251554|ref|YP_001412378.1| ABC transporter-like protein [Parvibaculum lavamentivorans DS-1]
gi|154155504|gb|ABS62721.1| ABC transporter related [Parvibaculum lavamentivorans DS-1]
Length = 653
Score = 36.3 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 37/264 (14%), Positives = 87/264 (32%), Gaps = 11/264 (4%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A+R L N + ++ +GV+IGV A++V++++ +G + +++ + + +++
Sbjct: 265 KMAFRSLRVN------IFRTALTLLGVVIGVAAVVVMLAIGDGSKANIMSAMQSMGTNLL 318
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI---SNSDF 126
+ + P + L + A + SS + +
Sbjct: 319 LVRPGAPGIRSSGDIATLIPADAEAIAETVPNVTAAIPERSSSSTVRFGNIDYRTEINGT 378
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ F + + + SP G+ +G
Sbjct: 379 WPEMTVVRDWAVGEGGFFSETDLNGYAPVIVLGATVVNALFPDGDSPIGEYVLVGNIPFE 438
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ F + + ++ + + + + I V V D I++T E I
Sbjct: 439 VVGVMESKGAASFGRDQDDVAFVPITTGFMRLFGQQYANSISVKVADAARIDETEEAIRT 498
Query: 247 ILGNGVVVIDWQQRYQIFFSCYES 270
+L D+Q R S E+
Sbjct: 499 LLLARHRTEDFQIRNTA--SMLET 520
>gi|159030604|emb|CAO88269.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 405
Score = 36.3 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 9/68 (13%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + +A L +N+ S ++ +G++IG +++ ++ + G + +
Sbjct: 1 MFIIESLKMAVATLGANKVR------SGLTMLGIIIGNASVVAMIGIGQGAQTLANDQFA 54
Query: 63 GINGHVVI 70
+ + +
Sbjct: 55 NLGPNTIF 62
>gi|148239553|ref|YP_001224940.1| peptide ABC transporter permease [Synechococcus sp. WH 7803]
gi|147848092|emb|CAK23643.1| ABC-type antimicrobial peptide transport system, permease
component [Synechococcus sp. WH 7803]
Length = 409
Score = 36.3 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A L +NR S ++ +G++IG ++I ++ V G + ++ + +V+
Sbjct: 13 MALTTLRANRLR------SLLTMLGIVIGNASVITLVGVGRGAQNLAESQLSTLGANVLF 66
Query: 71 QQKYYPLVDYQ 81
Q
Sbjct: 67 VVPGSNDTRRQ 77
>gi|91773855|ref|YP_566547.1| hypothetical protein Mbur_1915 [Methanococcoides burtonii DSM
6242]
gi|91712870|gb|ABE52797.1| protein of unknown function DUF214 [Methanococcoides burtonii DSM
6242]
Length = 414
Score = 36.3 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 9/63 (14%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + +A L ++ S+++ IG++IGV +++ ++++ + E +
Sbjct: 1 MRYKTSLKLATNILLHSKIR------SWLTIIGIVIGVASVVSIVALGDAMTESVESSFE 54
Query: 63 GIN 65
++
Sbjct: 55 DMD 57
>gi|295085309|emb|CBK66832.1| ABC-type antimicrobial peptide transport system, permease component
[Bacteroides xylanisolvens XB1A]
Length = 409
Score = 36.3 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 27/234 (11%), Positives = 61/234 (26%), Gaps = 8/234 (3%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFR----EDMIKRVLGINGHVVIQQKYYPLVDYQFIA 84
S ++ GV G+ L+ ++ G ++ + +
Sbjct: 18 SLLTAFGVFWGIFMLVALIGGGQGLEGMMKKNFEGFATNSGFLAAQKTGEAYKGFRKGRW 77
Query: 85 NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDF 144
L+ I + ++ GS + + +
Sbjct: 78 WNLEAIDIERLRSQVKDVEVITPSIARWGSKAVYEDKKYDCSVKGLYPDYLHIESQEMAY 137
Query: 145 DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDN 204
R + ++ + I ++ P D + + Y V+GM
Sbjct: 138 GRFINEVDIQEARKVCVIGKRIYESLFKPGEDPCGKYIRVDGIYYQVIGMSSSEGDMNIQ 197
Query: 205 GM----VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVV 254
G V + Q +NL + I VK + + +I+ +
Sbjct: 198 GRASEAVTLPFTTMQQTYNLGGRIDVICFTVKHGIKVSDVQPEMEQIIKAAHYI 251
>gi|229550969|ref|ZP_04439694.1| ABC superfamily ATP binding cassette transporter [Lactobacillus
rhamnosus LMS2-1]
gi|229315661|gb|EEN81634.1| ABC superfamily ATP binding cassette transporter [Lactobacillus
rhamnosus LMS2-1]
Length = 1097
Score = 36.3 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 31/229 (13%), Positives = 65/229 (28%), Gaps = 18/229 (7%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F V R +F +K F ++ GV V L ++V + ++ I
Sbjct: 716 MSFTHKVTARNIFRYKKRMF------MTIFGVAGSVTLLFSGLAVQHSIGGVNDRQFNDI 769
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ +I + + Q + F + +K V + + + I
Sbjct: 770 IKYDMIVAQKDNITKNQQTSLDKLFNENAVKKTKSVHYETVTKNAGANHDRQDITMIVPQ 829
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ N I + ++ +++ G
Sbjct: 830 STKNFDSYIHLATRKRQNKLTLQDNGGI-----ISERLAKLLNVDVGDTITVKEADGTRR 884
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKD 233
+ K + M+ ++M+ Q FN V+G V + D
Sbjct: 885 KVKITGITEMY-------MGHFLFMNKTAYQKAFNTNYKVNGHLVTLND 926
>gi|325105448|ref|YP_004275102.1| hypothetical protein Pedsa_2739 [Pedobacter saltans DSM 12145]
gi|324974296|gb|ADY53280.1| hypothetical protein Pedsa_2739 [Pedobacter saltans DSM 12145]
Length = 439
Score = 36.3 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 13/195 (6%), Positives = 45/195 (23%), Gaps = 6/195 (3%)
Query: 36 VMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIK 95
+++G+ +I +S +G + V + + + + ++ P+V
Sbjct: 7 MILGLGFMIAFLSFTSGTTHAQNRNVSLQVFYDELSYYGDWIDNPEYGYVW---RPNVGS 63
Query: 96 VLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKD 155
G + + F Y + + + G + +
Sbjct: 64 DFRPYYTNGRWIMTQYGNTWASDYEWGWAPFHYGRWYYDSYDGWIWVPDTVWGPAWVDWR 123
Query: 156 LARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMR---FPDYDNGMVYMSLQ 212
+ ++ + + + +
Sbjct: 124 TGGGYYGWAPMGPRLTVNINIGPRYYPDFYWVFIPQRYIYYNNYGSYWNPRRNVTIIRNT 183
Query: 213 EAQLYFNLENAVSGI 227
+ N+V +
Sbjct: 184 TIINNVYVNNSVRYV 198
>gi|193215116|ref|YP_001996315.1| hypothetical protein Ctha_1405 [Chloroherpeton thalassium ATCC
35110]
gi|193088593|gb|ACF13868.1| protein of unknown function DUF214 [Chloroherpeton thalassium
ATCC 35110]
Length = 457
Score = 36.3 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 26/62 (41%), Gaps = 8/62 (12%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M+ F + + LF ++ + ++ +GV IG AL+ ++S G ++
Sbjct: 1 MNFKDLFSF--SLQNLFRSKLR------TLLTTLGVAIGTGALVAMVSYGVGLQKTFSDE 52
Query: 61 VL 62
Sbjct: 53 FS 54
>gi|154496631|ref|ZP_02035327.1| hypothetical protein BACCAP_00923 [Bacteroides capillosus ATCC
29799]
gi|150274264|gb|EDN01355.1| hypothetical protein BACCAP_00923 [Bacteroides capillosus ATCC
29799]
Length = 437
Score = 36.3 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 9/54 (16%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 13 WRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+ L + F ++ +GV+IG ++++++S+ G +E + + +
Sbjct: 3 LQNLMRRKSRTF------LTVLGVLIGCCSIVIMVSLGIGMKETQERLLSEMGD 50
>gi|119947302|ref|YP_944982.1| ABC transporter permease protein [Psychromonas ingrahamii 37]
gi|119865906|gb|ABM05383.1| ABC transporter permease protein [Psychromonas ingrahamii 37]
Length = 399
Score = 36.3 bits (81), Expect = 4.2, Method: Composition-based stats.
Identities = 10/44 (22%), Positives = 25/44 (56%)
Query: 26 SIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+ SF+S +G+ +GV A++++ S+ G + ++ ++V
Sbjct: 18 RLRSFLSALGIAVGVAAVVLLTSIGEGVHQFVLAEFTQFGTNLV 61
>gi|154246394|ref|YP_001417352.1| ABC transporter related [Xanthobacter autotrophicus Py2]
gi|154160479|gb|ABS67695.1| ABC transporter related [Xanthobacter autotrophicus Py2]
Length = 676
Score = 36.3 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 27/232 (11%), Positives = 72/232 (31%), Gaps = 1/232 (0%)
Query: 26 SIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIAN 85
+ +F++ +G++IG+ +++ V+++ G R+ ++ + G+ + + D +
Sbjct: 298 RLRTFLTMLGIIIGIASVVCVVALGEGSRQRVLADISGLGTNTLEIFAGRSFGDTRSGRI 357
Query: 86 RLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFD 145
+ D + A +S+ + +N+ + + + G
Sbjct: 358 TTLVVADADALARQPYVAAVTPTVSTQSTVRFGAIEANALVNGVGQGYFAARGTKLAQGR 417
Query: 146 RGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNG 205
+ + K M +G + +
Sbjct: 418 FFDRDSVRALALDAVIDENTRKALFKDVDPIGQVMLVGSVFCRVVGVTAPQQGGFGGSQN 477
Query: 206 -MVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVID 256
+Y+ Q F ++ I V V D + + + R L + D
Sbjct: 478 LSIYLPYTTVQARFLGSTSLRSITVRVADDTDVALAEQQVTRFLTQRHGMKD 529
>gi|291528839|emb|CBK94425.1| ABC-type transport system, involved in lipoprotein release,
permease component [Eubacterium rectale M104/1]
Length = 441
Score = 36.3 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 26/78 (33%), Gaps = 1/78 (1%)
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVS-GIEVFVKDPDAIE 238
+ + Y + +Y+ LE S G EV++ + I+
Sbjct: 189 YKVDSDFEIYNSNEEGTSVYIHSPYNSIYVDYDYIVELLGLEYTASTGSEVYIDKIEHID 248
Query: 239 KTHENIVRILGNGVVVID 256
+ ++ GN V + D
Sbjct: 249 AVKTQLKKMYGNNVEIYD 266
>gi|328464064|gb|EGF35551.1| ABC transporter ATP binding protein [Lactobacillus helveticus MTCC
5463]
Length = 732
Score = 36.3 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 8/61 (13%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Query: 2 SIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+ + +++ + + + + ++ IG++++ VV+S+ NGF++ + +
Sbjct: 194 KMSYWNAIKLSFTNIMTKKGR------TILTAFASSIGIISIAVVLSISNGFQKQINTTM 247
Query: 62 L 62
Sbjct: 248 S 248
>gi|258538319|ref|YP_003172818.1| ABC transporter permease [Lactobacillus rhamnosus Lc 705]
gi|257149995|emb|CAR88967.1| ABC transporter permease protein [Lactobacillus rhamnosus Lc 705]
Length = 1101
Score = 36.3 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 31/229 (13%), Positives = 65/229 (28%), Gaps = 18/229 (7%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F V R +F +K F ++ GV V L ++V + ++ I
Sbjct: 720 MSFTHKVTARNIFRYKKRMF------MTIFGVAGSVTLLFSGLAVQHSIGGVNDRQFNDI 773
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ +I + + Q + F + +K V + + + I
Sbjct: 774 IKYDMIVAQKDNITKNQQTSLDKLFNENAVKKTKSVHYETVTKNAGANHDRQDITMIVPQ 833
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ N I + ++ +++ G
Sbjct: 834 STKNFDSYIHLATRKRQNKLTLQDNGGI-----ISERLAKLLNVDVGDTITVKEADGTRR 888
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKD 233
+ K + M+ ++M+ Q FN V+G V + D
Sbjct: 889 KVKITGITEMY-------MGHFLFMNKTAYQKAFNTNYKVNGHLVTLND 930
>gi|25011092|ref|NP_735487.1| hypothetical protein gbs1038 [Streptococcus agalactiae NEM316]
gi|23095491|emb|CAD46697.1| unknown [Streptococcus agalactiae NEM316]
Length = 876
Score = 36.3 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 31/249 (12%), Positives = 74/249 (29%), Gaps = 22/249 (8%)
Query: 3 IFSRFEV--IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
I+ + V R +F ++ ++ GV V L + + + ++ + +
Sbjct: 495 IWKKLSFTQKVTARNIFRYKQRM------IMTIFGVAGSVALLFSGLGIQSSLKQTVNEH 548
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
I + ++ + + L I + + + + +
Sbjct: 549 FGRIMPYDILLTYNTNASPPKILE--LLSKDSKIDKYQPIHLENLDESIPGQINKQSISL 606
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
L + + + KG+II K LA+ ++ GD I++ +
Sbjct: 607 FITDKKQLLPFIYLQEATTNKSLHLNNKGIIISKKLAQFYHVNTGDFIHLSHSQTLPSRK 666
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ V ++M+ Q + F E + V +
Sbjct: 667 LKITGVVNANVGH------------YIFMTKQYYRTIFKKETKDNAFLVKLTKHKIANNL 714
Query: 241 HENIVRILG 249
E ++ I G
Sbjct: 715 AEKLLEING 723
>gi|295136460|ref|YP_003587136.1| ABC transporter permease [Zunongwangia profunda SM-A87]
gi|294984475|gb|ADF54940.1| putative ABC transporter permease [Zunongwangia profunda SM-A87]
Length = 823
Score = 36.3 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 26/50 (52%), Gaps = 8/50 (16%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIG-VMALIVVMSVMN 51
+F + + +AWR + + N+ ++ +G+ IG V +++ + + N
Sbjct: 1 MFKNY-IKIAWRNILRYKTNSVLN------ILGLTIGLVSVILIALYIQN 43
>gi|154706652|ref|YP_001423473.1| export ABC transporter permease protein [Coxiella burnetii Dugway
5J108-111]
gi|154355938|gb|ABS77400.1| export ABC transporter permease protein [Coxiella burnetii Dugway
5J108-111]
Length = 397
Score = 36.3 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 23/253 (9%), Positives = 71/253 (28%), Gaps = 11/253 (4%)
Query: 5 SRFEVIV--AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
F + A R L S++ +F ++ +G+++G +++ +++ E + +
Sbjct: 1 MSFIRYIKAALRNLISSKLRSF------LAILGILVGTASVVALITSSQLATEHALDQFK 54
Query: 63 GINGHVVIQQKYYPLVDYQ---FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
+ +++ Q L IP + ++ A + L + +
Sbjct: 55 ELGTNLLAMDVQPRPGQQQTDVSQQITLAKIPQIKHASQQIALVAPYTSLFNTLYFEGKQ 114
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + + F + + I +P G
Sbjct: 115 TEGQVLGATAELAEIVKIRIDKGRFVSYLDRNSFFCVIGSDVGKDFLAKGIANPIGHQIS 174
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+G + + F D + + + + ++ + + I +
Sbjct: 175 IGKFVFTIIGVAKHWQPNWFLYADINKGAIIPLATSFFLSKDAQINNLLFRLVPDPDIAE 234
Query: 240 THENIVRILGNGV 252
+ +
Sbjct: 235 VQNALADKMSQLY 247
>gi|77165681|ref|YP_344206.1| hypothetical protein Noc_2216 [Nitrosococcus oceani ATCC 19707]
gi|254434943|ref|ZP_05048451.1| efflux ABC transporter, permease protein [Nitrosococcus oceani
AFC27]
gi|76883995|gb|ABA58676.1| Protein of unknown function DUF214 [Nitrosococcus oceani ATCC
19707]
gi|207091276|gb|EDZ68547.1| efflux ABC transporter, permease protein [Nitrosococcus oceani
AFC27]
Length = 388
Score = 36.3 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 28/234 (11%), Positives = 67/234 (28%), Gaps = 14/234 (5%)
Query: 13 WRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQ 72
R L++ + + + ++ +G+ + V V+ + G + ++ N
Sbjct: 9 LRNLWTRK------LTTLLTALGMALVVFVFATVLMLSKGLEQTLVATGSADNV------ 56
Query: 73 KYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNS 132
I + +D I + V++ + D N
Sbjct: 57 IVIRHSAETEIQSVIDREQAAIIASLPDTAYDVAGIPLLSKELVVLMVLPKKDQGKPSNV 116
Query: 133 FSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVL 192
R + + G+ I + + + +T+
Sbjct: 117 TVRGISDTGLTLRPQVRLTQGEMFRPGAREIIVGNKIAQNFANAGIGKKLRLGLGEWTIT 176
Query: 193 GMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
G+F + ++ + + F + S I + DP A ++T E I
Sbjct: 177 GIFDAGKTGFS-SEIWGDVDQLMQAFRRND-YSSIIFKLADPSAFKQTEEKIEN 228
>gi|53711851|ref|YP_097843.1| ABC transporter putative permease [Bacteroides fragilis YCH46]
gi|60680079|ref|YP_210223.1| putative ABC transporter [Bacteroides fragilis NCTC 9343]
gi|253564095|ref|ZP_04841552.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|52214716|dbj|BAD47309.1| ABC transporter putative permease [Bacteroides fragilis YCH46]
gi|60491513|emb|CAH06265.1| putative ABC transporter [Bacteroides fragilis NCTC 9343]
gi|251947871|gb|EES88153.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|301161607|emb|CBW21147.1| putative ABC transporter [Bacteroides fragilis 638R]
Length = 419
Score = 36.3 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 26/224 (11%), Positives = 59/224 (26%), Gaps = 8/224 (3%)
Query: 20 RKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVD 79
++N ++ + + V G+ LIV++ NG K + + +
Sbjct: 13 KRNKLRTLLTGFA---VAWGIFMLIVLLGAGNGLIHAFEKSSSARALNSIKIYPGWTGKP 69
Query: 80 YQ--FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFY 137
Y R+ + +S +S + + +
Sbjct: 70 YDGLKEGRRIQLDNKDLDATMEHFSDNIISVGASQWQSNVNLSYGQEYVNLSLEGVYPNF 129
Query: 138 GNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK---SYTVLGM 194
V + I DL + + +G +G +
Sbjct: 130 TEVESVKSTDGRFINDIDLKERRKVIVLHTKTAEILFGKSKTEPIGKFVNAGGVSYQVVG 189
Query: 195 FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
D + Y+ Q+ +N + ++ + K IE
Sbjct: 190 LYTDPGDQGSSEAYIPFSTLQVIYNKGDKLNNLTFTTKGLTTIE 233
>gi|260101910|ref|ZP_05752147.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Lactobacillus helveticus DSM 20075]
gi|260084273|gb|EEW68393.1| ABC superfamily ATP binding cassette transporter, ABC protein
[Lactobacillus helveticus DSM 20075]
Length = 632
Score = 36.3 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 8/61 (13%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Query: 2 SIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+ + +++ + + + + ++ IG++++ VV+S+ NGF++ + +
Sbjct: 94 KMSYWNAIKLSFTNIMTKKGR------TILTAFASSIGIISIAVVLSISNGFQKQINTTM 147
Query: 62 L 62
Sbjct: 148 S 148
>gi|229099414|ref|ZP_04230344.1| ABC transporter, permease component [Bacillus cereus Rock3-29]
gi|228684038|gb|EEL37986.1| ABC transporter, permease component [Bacillus cereus Rock3-29]
Length = 846
Score = 36.3 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 32/224 (14%), Positives = 67/224 (29%), Gaps = 17/224 (7%)
Query: 27 IASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANR 86
+ + + +GVM+ M L+ SV +E ++ R + ++ +
Sbjct: 10 LIALGAALGVMLATMLLLGNQSVEQSVKEQVVSRY--GDYNLQFGYIKNDMYLNNESLKG 67
Query: 87 LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDR 146
+D + + K+ + F G + +
Sbjct: 68 IDGLENAEKISKVLIPYPFPHYKELSGKPSYWGVEQD------SPEIHSYKIFEGRYPKE 121
Query: 147 GKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGM 206
G V + K I +GD I + P K+ V+G+
Sbjct: 122 GAEVALTKGYTDRENIRVGDTIKLPFPQHGE---------KTVKVVGILNPPLMAAMGHG 172
Query: 207 VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN 250
Y + Q NL N + ++V D + ++ + + N
Sbjct: 173 AYFPIHWLQKELNLLNQFNLVQVKTADVNVKRAIALDVNKKIEN 216
>gi|170016734|ref|YP_001727653.1| peptide ABC transporter ATPase [Leuconostoc citreum KM20]
gi|169803591|gb|ACA82209.1| ABC-type antimicrobial peptide transport system, ATPase component
[Leuconostoc citreum KM20]
Length = 660
Score = 36.3 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 26/261 (9%), Positives = 65/261 (24%), Gaps = 30/261 (11%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A+ +L + + I G IGV ++I+ + + NG + + +V +
Sbjct: 250 WDMAFDHLKYKKLQNALIII------GSAIGVFSVILFLGLGNGIKGYIANQVNDLVNPN 303
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAF----------------VSGLSSG 112
+ Q A + + + +G
Sbjct: 304 YQTVVRNTTTNKQANATERMQETMQLMATDYKATTMNEATLKRLASVKGVDNVYAGGQFN 363
Query: 113 GSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILS 172
+ + + + + G G ++ S +
Sbjct: 364 NAVFTYGNVKSQPVQLKSWTPQYAKKTIKAGHQAGDGEVLIDREFAKKIQSNYKALIGKD 423
Query: 173 PYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMS-LQEAQLYFNLENAVS-----G 226
+G +++ Q NAV+
Sbjct: 424 IAFTYIAFDQDNHPIPIATTAKIAGMTDGGQSGKMFIQNWDTIQKDLKKNNAVTDANYAS 483
Query: 227 IEVFVKDPDAIEKTHENIVRI 247
+E+ D ++ T + I ++
Sbjct: 484 VEIR--DTKNVKATMKRINQV 502
>gi|317061650|ref|ZP_07926135.1| ABC transporter permease [Fusobacterium sp. D12]
gi|313687326|gb|EFS24161.1| ABC transporter permease [Fusobacterium sp. D12]
Length = 429
Score = 36.3 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 30/266 (11%), Positives = 74/266 (27%), Gaps = 29/266 (10%)
Query: 13 WRYLFSN--RKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
WR + R+ + + +F +GV + + V++ V D + + L G +
Sbjct: 6 WRMVRGTLFRQRNKMLMIAFTVALGVSLATAMMNVMLGVG-----DKVNKELKTYGANIT 60
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
+ + + + + + + + + + L
Sbjct: 61 VMHKDASILDDLYGIHGEDVSEKFLLEEEIPKVKQIFWGFNIVDFAPYLERNIE-VTGLP 119
Query: 131 NSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYT 190
+ + + G + + + +V +G + K
Sbjct: 120 DKVKIYGTWFHHHLLMPTGEELDTGIKNLKNWWEVKGEWLQEEDENVILLGSLLAGKYNY 179
Query: 191 VL----------------GMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVF---V 231
+ D+ +Y +L+ Q F LE +S +EV
Sbjct: 180 KVGDSLEVKSKNGLKKLRIKGIFNSGGEDDAGIYTNLKTVQDLFGLEGKISFLEVSALTT 239
Query: 232 KDPDAIEKTHENIVRILGNGVVVIDW 257
D D +K ++ + + W
Sbjct: 240 PDNDLAKKAAQDPNSLTISEY--ETW 263
>gi|304439479|ref|ZP_07399388.1| conserved hypothetical protein [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304372075|gb|EFM25672.1| conserved hypothetical protein [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 1333
Score = 36.3 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 21/233 (9%), Positives = 66/233 (28%), Gaps = 19/233 (8%)
Query: 14 RYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQK 73
R +F + ++ +G+M G AL+++ + G + + +
Sbjct: 964 RNIFRYKNRM------IMTILGIM-GCSALLILGFGIEGSVSGIKDKQFSEIMKFDLGII 1016
Query: 74 YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSF 133
Y +D + + I + + S + +L++
Sbjct: 1017 YDRNIDKEEYEDFSQKIDSIEGIKEEDSFIIKNFKAKFKEIDQNISLFVPESTDHLEDYI 1076
Query: 134 SRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLG 193
+ + + + + + I+ K+ + G + + +
Sbjct: 1077 NLRNRWTGKNIELPEKGAV-----ISEKIAKLLKVKVGDLIEVKDEHGEVYKVQVAEISE 1131
Query: 194 MFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
M+ ++M+ + F E + + + D + ++
Sbjct: 1132 MY-------IGHFIFMNRDYYEKVFGKEYESNARLIKLTDKKMNDSVVSKLMD 1177
>gi|110746842|gb|ABG89337.1| Na+/H+ antiporter [Caragana korshinskii]
Length = 538
Score = 36.3 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 19 NRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFRED 56
+K F++ + +SF + V +I+ + VM F+
Sbjct: 99 KKKQFFVNFITIVSFGAIGTLVSCVIITLGVMYAFKRM 136
>gi|42784417|ref|NP_981664.1| ABC transporter, permease protein [Bacillus cereus ATCC 10987]
gi|42740349|gb|AAS44272.1| ABC transporter, permease protein [Bacillus cereus ATCC 10987]
Length = 400
Score = 36.3 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 35/247 (14%), Positives = 94/247 (38%), Gaps = 11/247 (4%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A + +++ S ++ +G++IGV ++I V+++ G + + G G+
Sbjct: 6 SIKIALSSILAHKLR------SALTMLGIIIGVGSIITVVAIGQGGEAMLKSKFAGSGGN 59
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
++ ++ ++ +F + + + V VS + + G+ + +++ +
Sbjct: 60 NLMPIQFKADINDEFNMGGHEIPKLTEEDILEVKQVKDVSHVITTNQGMEILDVNDKKAN 119
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
Y V+ + D+ + + + + DV P+G I K
Sbjct: 120 LNVIGLDNEYFAVNKVKIVKGRTLSESDITHANNVMMISTKTEETLFKDVNPVGQIIEMK 179
Query: 188 ----SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ F ++ + L + F ++ + I + K+ D +EK +
Sbjct: 180 GQPMQIVGVYTSDNEFMGFEMEEGLIPLTLWPILFGTDD-IQNIAIQAKNVDDLEKAGKQ 238
Query: 244 IVRILGN 250
V +L +
Sbjct: 239 AVDVLNS 245
>gi|224796530|ref|YP_002641480.1| efflux ABC transporter, permease protein [Borrelia valaisiana
VS116]
gi|224497478|gb|ACN53104.1| efflux ABC transporter, permease protein [Borrelia valaisiana
VS116]
Length = 408
Score = 36.3 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 35/269 (13%), Positives = 80/269 (29%), Gaps = 20/269 (7%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMN----GFREDMIKRVLGI 64
+ +A+ +F + + + +SF+ + V+ L++ + MN G ++ I
Sbjct: 2 LKLAFFNIFRDVRRSM-----MVSFL-LSSSVVFLLLFIGYMNYSSEGMEMGLVSSTGHI 55
Query: 65 NGHVVIQQKYYPLVDY------QFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
F ++ + + + GL
Sbjct: 56 QIARKNYFNPKFSGIKNNLVLKDFEILQIKNEINKYSEFKYSNLIVNFEGLIGNSFASKP 115
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
+ + +IG LA +LGI K N
Sbjct: 116 FFATAFEDPDFATKSLSLVDGNPLFDSSVGDFLIGSSLAMSLGIENLTKENSKLTLMTDM 175
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
G G+ + + G+ + D+ +V S+ + +F+ ++ I+V++K+ +
Sbjct: 176 L-GEGLALQDIRLSGIVKFPVIQTDSMVVITSINTLKSFFDFKDGAHLIQVYLKNNSFLN 234
Query: 239 KTHEN---IVRILGNGVVVIDWQQRYQIF 264
+ DW + F
Sbjct: 235 SFKNKLDYLRNKSNIDFEYNDWYEINPSF 263
>gi|295425795|ref|ZP_06818476.1| ABC superfamily ATP binding cassette transporter [Lactobacillus
amylolyticus DSM 11664]
gi|295064488|gb|EFG55415.1| ABC superfamily ATP binding cassette transporter [Lactobacillus
amylolyticus DSM 11664]
Length = 778
Score = 36.3 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 8/61 (13%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Query: 2 SIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+ + +++ + + + + ++ IG++++ VV+S+ NGF++ + +
Sbjct: 240 KMSYWNAIKLSFTNIMTKKGR------TILTAFASSIGIISIAVVLSISNGFQKQIDTTM 293
Query: 62 L 62
Sbjct: 294 S 294
>gi|270618770|ref|ZP_06221780.1| Lipoprotein releasing system transmembrane protein lolC
[Haemophilus influenzae HK1212]
gi|270317896|gb|EFA29224.1| Lipoprotein releasing system transmembrane protein lolC
[Haemophilus influenzae HK1212]
Length = 108
Score = 36.3 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 25/63 (39%)
Query: 41 MALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFV 100
MALI+V+SVMNG ++VL H ++ + ++ V V
Sbjct: 1 MALIIVLSVMNGLENYQKQQVLSSIPHAIVSEDQPISMEKTLENLPHFVQKAVPINTTNV 60
Query: 101 SGQ 103
Q
Sbjct: 61 IYQ 63
>gi|224026826|ref|ZP_03645192.1| hypothetical protein BACCOPRO_03583 [Bacteroides coprophilus DSM
18228]
gi|224020062|gb|EEF78060.1| hypothetical protein BACCOPRO_03583 [Bacteroides coprophilus DSM
18228]
Length = 416
Score = 36.3 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 21/210 (10%), Positives = 67/210 (31%), Gaps = 5/210 (2%)
Query: 20 RKNAFISIASFISFIGVMIGVMALIVVMSVMNGFRE--DMIKRVLGINGHVVIQQKYYPL 77
++N ++ + S V G+ LIV++ NG + R + +N +
Sbjct: 13 QRNKLRTVLTGFS---VAWGIFMLIVLLGAGNGLINAFEGQTRDMKMNSMKIYPGYTSKP 69
Query: 78 VDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFY 137
+ + ++ + ++ ++ G + + S + Y
Sbjct: 70 YNGLNEGRSISLDDTDRELTATAFSKNIITTGATISKGSVYLNFEKENVSISLDGVFPSY 129
Query: 138 GNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRM 197
+ + I +D+ + + + + P+G + ++ + +
Sbjct: 130 PELEAIKIKKGRFINERDMKERRKVIVLHEKTAKQLFPKSQPLGKYLNAQGVSYQVVGIY 189
Query: 198 RFPDYDNGMVYMSLQEAQLYFNLENAVSGI 227
+ + + Q+ +N +++ I
Sbjct: 190 TDQNSFSPSALIPFTTLQVVYNKGDSIDNI 219
>gi|75759940|ref|ZP_00740010.1| ABC transporter permease protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74492573|gb|EAO55719.1| ABC transporter permease protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 411
Score = 36.3 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 29/261 (11%), Positives = 63/261 (24%), Gaps = 22/261 (8%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + +A L RK I+I I+ I +++ L + + + NG + ++L
Sbjct: 1 MKIKLYIKLATVNLLRRRKKNTINI--LITTIALIL----LTLTICISNGLNNFIQTKLL 54
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ + D + I + + R I
Sbjct: 55 NTVDFKTLIVETGTRDDNKEKIYEKFNNHKDIIKIYPWISNNGGEVQIEKNQNLTKREIF 114
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILS---------- 172
+ + + + L K
Sbjct: 115 LKPALDKISPNIVKGNGIYENSKNVALIPTEFSLDPLGYEIGLTKEKNNFLNGADFIGEY 174
Query: 173 ---PYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLY---FNLENAVSG 226
Y G + V+G++ Y+ + F E V
Sbjct: 175 ITLKYKIYNQTGHTYGEYKFKVVGVYDPTTTFDTPDTFYIPYSDLLNLNTSFQKETNVQN 234
Query: 227 IEVFVKDPDAIEKTHENIVRI 247
+ V V + + I +
Sbjct: 235 MAVVVNKYENLNNIKSIIEKE 255
>gi|218132058|ref|ZP_03460862.1| hypothetical protein BACEGG_03685 [Bacteroides eggerthii DSM 20697]
gi|317477165|ref|ZP_07936406.1| hypothetical protein HMPREF1016_03390 [Bacteroides eggerthii
1_2_48FAA]
gi|217985708|gb|EEC52049.1| hypothetical protein BACEGG_03685 [Bacteroides eggerthii DSM 20697]
gi|316906708|gb|EFV28421.1| hypothetical protein HMPREF1016_03390 [Bacteroides eggerthii
1_2_48FAA]
Length = 418
Score = 36.3 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 24/238 (10%), Positives = 58/238 (24%), Gaps = 12/238 (5%)
Query: 20 RKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI--NGHVVIQQKYYPL 77
++N + + + V G+ LIV++ NG + N +
Sbjct: 13 KRNKLRTFLTGFA---VAWGIFMLIVLLGAGNGLIHAFEQNASERALNSIRLGGGWTTKS 69
Query: 78 VDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFY 137
R+ + ++ ++ G + + Y
Sbjct: 70 YAGLKEGRRIRMENKDLNATERYFPDNIITAGATLQQGDVNISFGQEYINISLMGVHPNY 129
Query: 138 GNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT--PMGMGIRSKSYTVLGMF 195
I D+ + I K + + P+G +
Sbjct: 130 VQSEAIKTATGRFINQNDVKERRKVIILHKKSAEILFKKSHTEPVGQFVNVGGVAYRVAG 189
Query: 196 RMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVV 253
+ + ++ Q +N + ++ I K+ T E +
Sbjct: 190 LYEDQGDQSSVAFIPFSTLQTIYNKGDKLNNIIFTTKNL-----TSEEANKTFEKEYR 242
>gi|292491310|ref|YP_003526749.1| hypothetical protein Nhal_1200 [Nitrosococcus halophilus Nc4]
gi|291579905|gb|ADE14362.1| protein of unknown function DUF214 [Nitrosococcus halophilus Nc4]
Length = 388
Score = 36.3 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 32/244 (13%), Positives = 71/244 (29%), Gaps = 16/244 (6%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + I+ R L++ + + + ++ IG+ + V V+ + G + ++
Sbjct: 1 MNLPYSYIL--RNLWTRK------LTTLLTAIGMALVVFVFATVLMLSEGLEKTLVATGS 52
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
N + + +D I V +++ ++
Sbjct: 53 PDNV------IVIRRSAETEVQSVIDREQAAIIVSLSNPAYGPAGKPLVSKELMVLMVLT 106
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
D N R + + G+ I G +
Sbjct: 107 KKDSGKPANVTVRGISDTGLVLRPQVRLTQGRMFHPGAREIIVGNKISQGFTGIGIGEKL 166
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHE 242
+ +TV G+F + ++ + + F NA S I + DP E+T
Sbjct: 167 NLGLGEWTVTGIFDAGKTGFG-SEIWGDVDQLMQAFRR-NAYSSILFKLVDPTNFEQTQF 224
Query: 243 NIVR 246
I
Sbjct: 225 RIEN 228
>gi|229076332|ref|ZP_04209297.1| ABC transporter, permease component [Bacillus cereus Rock4-18]
gi|229118427|ref|ZP_04247781.1| ABC transporter, permease component [Bacillus cereus Rock1-3]
gi|228664997|gb|EEL20485.1| ABC transporter, permease component [Bacillus cereus Rock1-3]
gi|228706767|gb|EEL58975.1| ABC transporter, permease component [Bacillus cereus Rock4-18]
Length = 846
Score = 36.3 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 32/224 (14%), Positives = 67/224 (29%), Gaps = 17/224 (7%)
Query: 27 IASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANR 86
+ + + +GVM+ M L+ SV +E ++ R + ++ +
Sbjct: 10 LIALGAALGVMLATMLLLGNQSVEQSVKEQVVSRY--GDYNLQFGYIKNDMYLNNESLKG 67
Query: 87 LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDR 146
+D + + K+ + F G + +
Sbjct: 68 IDGLENAEKISKVLIPYPFPHYKELSGKPSYWGVEQD------SPEIHSYKIFEGRYPKE 121
Query: 147 GKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGM 206
G V + K I +GD I + P K+ V+G+
Sbjct: 122 GAEVALTKGYTDRENIRVGDTIKLPFPQHGE---------KTVKVVGILNPPLMAAMGHG 172
Query: 207 VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGN 250
Y + Q NL N + ++V D + ++ + + N
Sbjct: 173 AYFPIHWLQKELNLLNQFNLVQVKTADVNVKRAIALDVNKKIEN 216
>gi|116750236|ref|YP_846923.1| ABC transporter-like protein [Syntrophobacter fumaroxidans MPOB]
gi|134048484|sp|A0LM36|MACB_SYNFM RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|116699300|gb|ABK18488.1| ABC transporter related [Syntrophobacter fumaroxidans MPOB]
Length = 715
Score = 36.3 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLG 63
F R + A L N + ++ +G++IGV A+I +M + G + + +
Sbjct: 259 FRR-SLHTALSSLRRNVLR------AALTTLGIIIGVAAVIAMMEIGRGSSTAIQRTIAS 311
Query: 64 INGHVV 69
+ H +
Sbjct: 312 MGAHTL 317
>gi|284035846|ref|YP_003385776.1| hypothetical protein Slin_0925 [Spirosoma linguale DSM 74]
gi|283815139|gb|ADB36977.1| protein of unknown function DUF214 [Spirosoma linguale DSM 74]
Length = 794
Score = 36.3 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 33/250 (13%), Positives = 69/250 (27%), Gaps = 12/250 (4%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVM-ALIVVMSVMNGFREDMIKRV 61
+ + + +A+R L + +FI+I G+ +G+ A+++ + V + + +
Sbjct: 1 MLQNY-LKIAFRNLRRQKVYSFINI------GGLAVGMAVAMLIGLWVYDELSFNRYHKN 53
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFI---PDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
HV+ Q V V ++ G
Sbjct: 54 YNRIAHVMQNQTINGGVSTAPTIPIPLANVLRKTYGSNFKHVVLSSWTEGHVLSFGEKKF 113
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
R N + S S + R I+ N + I L T
Sbjct: 114 RQTGNYIEPDAPDLLSLTMLKGSRNGLREPYSILLSSSVANALFGTAEPIGKLLKIDART 173
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYD-NGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI 237
+ + + F V + + +N I V + D +
Sbjct: 174 AVKVTGVYEDLPYNSQFSTLEYMVPWQMNVAIRDWVKKSEQKWDNNSFQIFVQLADHADM 233
Query: 238 EKTHENIVRI 247
++ + I
Sbjct: 234 QQVSDKIKDA 243
>gi|256422668|ref|YP_003123321.1| hypothetical protein Cpin_3658 [Chitinophaga pinensis DSM 2588]
gi|256037576|gb|ACU61120.1| protein of unknown function DUF214 [Chitinophaga pinensis DSM
2588]
Length = 803
Score = 36.3 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 26/48 (54%), Gaps = 8/48 (16%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVM-ALIVVMSV 49
+F + + +A R L+ ++ + S I+ G+ +GV AL+++ V
Sbjct: 1 MFKSY-LKIALRNLWKHK------LFSVINITGLALGVACALLIIFHV 41
>gi|260780741|ref|XP_002585500.1| hypothetical protein BRAFLDRAFT_111943 [Branchiostoma floridae]
gi|229270492|gb|EEN41511.1| hypothetical protein BRAFLDRAFT_111943 [Branchiostoma floridae]
Length = 670
Score = 36.3 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNG 52
+AWRYL S+R + + V + + L+ V+S+++G
Sbjct: 338 LAWRYLRSHRSEQHSGAVLDKALLSVALFGVFLLAVLSLISG 379
>gi|295132538|ref|YP_003583214.1| ABC transporter efflux protein [Zunongwangia profunda SM-A87]
gi|294980553|gb|ADF51018.1| ABC transporter efflux protein [Zunongwangia profunda SM-A87]
Length = 417
Score = 36.3 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 36/256 (14%), Positives = 72/256 (28%), Gaps = 21/256 (8%)
Query: 1 MSIFSRF---EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDM 57
M IF R A L +N F +S +GV IG+ ++I V++ ++ + ++
Sbjct: 1 MLIFLRVLGESFNFAINALKNNLLRTF------LSLLGVTIGIFSIIGVLAAVDSLKNEI 54
Query: 58 IKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVL 117
+ ++ I ++ F F+ + + V
Sbjct: 55 SGSLSSLDNSTTIVMRFNFGPTDIPRWKWQQFPDVTYDEYQFLKRNLPDAKAVTFTQNVP 114
Query: 118 VRGISNSDFSYL---------QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKI 168
I D S L + F G + +
Sbjct: 115 AETIKYQDASSLGVSVQAVGSEYYDIEAINIEEGRFFNESEAASGSPVIVMGSEIAENLF 174
Query: 169 NILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIE 228
+ P G M + + F +G V++ + + + N +
Sbjct: 175 GSIDPLGKQVRMYGSKFTVIGLLKKEGSSMFGPSKDGQVFIPVNVTRRIYGENNRNIFPQ 234
Query: 229 VFVK---DPDAIEKTH 241
+ +K D D E
Sbjct: 235 ILLKPEADVDNAEFLA 250
>gi|167761818|ref|ZP_02433945.1| hypothetical protein BACSTE_00159 [Bacteroides stercoris ATCC
43183]
gi|167700324|gb|EDS16903.1| hypothetical protein BACSTE_00159 [Bacteroides stercoris ATCC
43183]
Length = 418
Score = 36.3 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 26/218 (11%), Positives = 58/218 (26%), Gaps = 7/218 (3%)
Query: 20 RKNAFISIASFISFIGVMIGVMALIVVMSVMNG----FREDMIKRVLGINGHVVIQQKYY 75
++N + + + V G+ LIV++ NG F ++ +R L
Sbjct: 13 KRNKLRTFLTGFA---VAWGIFMLIVLLGAGNGIIHAFEQNASERALNSIRLGGGWTTQS 69
Query: 76 PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSR 135
+ +L+ F G + G + S + +
Sbjct: 70 YEGLKEGRRIQLENKDLAATEKYFPDNIITAGATLRQGDVNISFGQEYINISLMGVHPNY 129
Query: 136 FYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMF 195
R + I IL P+G + + +
Sbjct: 130 VESEAIKTASGRFINRNDVKERRKVIILHKKSAEILFGKSRTEPVGRFVNAGGVAYRVVG 189
Query: 196 RMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKD 233
+ + ++ Q +N + ++ I K+
Sbjct: 190 LYEDQGDQSSLAFIPFSTMQTIYNKGDKLNNIIFTTKN 227
>gi|150400413|ref|YP_001324180.1| hypothetical protein Mevan_1676 [Methanococcus vannielii SB]
gi|150013116|gb|ABR55568.1| protein of unknown function DUF214 [Methanococcus vannielii SB]
Length = 412
Score = 36.3 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 35/255 (13%), Positives = 81/255 (31%), Gaps = 16/255 (6%)
Query: 4 FSRFEVI-VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ +A + + S++ S+I+ +G++IG+ ++I ++S + E + ++
Sbjct: 1 MKPLKLFKLAAKMVKSSKLR------SWITILGIVIGIASVIAIISAGDFLSESVSSKLD 54
Query: 63 GINGHVV-----IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVL 117
G+ + K + L I D+ V VS + + + +
Sbjct: 55 GMVSKEITLTASQNNKDKTSELTKRDVIILKGISDIEYVDIRVSTRNEIRFAGGHETANI 114
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
+ N + S S D + A N I I + I + V
Sbjct: 115 IGVDQNVWPVMSEEELSSGRLLQSGDRNSVVISYYTAKNAFNREIGINQMVIIGNKQFKV 174
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYF----NLENAVSGIEVFVKD 233
+ ++ + +G VY + + I +K+
Sbjct: 175 VGILKEDETQGFGRMGGANSNIIYMPYEAVYTLESDKDATYSISEKKSGVYDSIVFTLKE 234
Query: 234 PDAIEKTHENIVRIL 248
++ I + L
Sbjct: 235 GVNQTESLNTIEKKL 249
>gi|312885698|ref|ZP_07745332.1| protein of unknown function DUF214 [Mucilaginibacter paludis DSM
18603]
gi|311301794|gb|EFQ78829.1| protein of unknown function DUF214 [Mucilaginibacter paludis DSM
18603]
Length = 794
Score = 36.3 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALI 44
+ + + +AWR L N+ ++F++ I+ +GV + V LI
Sbjct: 1 MIKNY-IKIAWRNLSRNKIHSFLN----IAGLGVGMAVAMLI 37
>gi|302875763|ref|YP_003844396.1| hypothetical protein Clocel_2939 [Clostridium cellulovorans 743B]
gi|307689196|ref|ZP_07631642.1| hypothetical protein Ccel74_13639 [Clostridium cellulovorans 743B]
gi|302578620|gb|ADL52632.1| protein of unknown function DUF214 [Clostridium cellulovorans 743B]
Length = 779
Score = 36.3 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 29/255 (11%), Positives = 70/255 (27%), Gaps = 16/255 (6%)
Query: 2 SIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
S+ + ++ + + + + I+ +F S IG+ IGV +V+S+ NGF + +
Sbjct: 240 SMSFLTALKLSGKNIITKKWRTAIT--AFASSIGI-IGVA---LVLSLSNGFDKQINSFE 293
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
G + I + F + + + F + +S S +
Sbjct: 294 TGALSNYPITISQNAMSMDAFGPPKENANE----LTEFTKDKVVYPYDASKNSVTHKNVL 349
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
+ YL S + VS L + + +
Sbjct: 350 TQEYMDYLDKIDSSWLDGVSYSRSVKMN------LLKLSDGKATPLNTAAAGFSIYPSKA 403
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTH 241
+ + + + + + G + ++ D
Sbjct: 404 DQSSNSYLEQYYDLLAGNFPTNKTDLVLVVDKYNQLEKNSLEALGFDGNSENIDFNNFIG 463
Query: 242 ENIVRILGNGVVVID 256
++ + V
Sbjct: 464 HEFKMLMNDDYYVKS 478
>gi|212635680|ref|YP_002312205.1| antimicrobial peptide ABC transporter permease [Shewanella
piezotolerans WP3]
gi|212557164|gb|ACJ29618.1| ABC-type antimicrobial peptide transport system, permease
component [Shewanella piezotolerans WP3]
Length = 424
Score = 36.3 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 9/39 (23%), Positives = 23/39 (58%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ ++ +G++ GV A+I ++SV G + +K + + +
Sbjct: 34 TLLTLLGMIFGVGAVIAMLSVGEGAEREALKMIESMGVN 72
>gi|24372410|ref|NP_716452.1| ABC transporter, ATP-binding/permease protein [Shewanella
oneidensis MR-1]
gi|81845905|sp|Q8EIL8|MACB_SHEON RecName: Full=Macrolide export ATP-binding/permease protein MacB
gi|24346376|gb|AAN53897.1|AE015526_8 ABC transporter, ATP-binding/permease protein [Shewanella
oneidensis MR-1]
Length = 656
Score = 36.3 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A + ++R F ++ +G++IG+ +++ V+++ G + +++K + + +
Sbjct: 261 ALKMALLAMSTHRLRTF------LTMLGIIIGIASVVSVVALGEGSQREILKSISSMGTN 314
Query: 68 VV 69
+
Sbjct: 315 TI 316
>gi|33862950|ref|NP_894510.1| putative ABC transporter [Prochlorococcus marinus str. MIT 9313]
gi|33634867|emb|CAE20853.1| possible ABC transporter [Prochlorococcus marinus str. MIT 9313]
Length = 409
Score = 36.3 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 34/72 (47%), Gaps = 10/72 (13%)
Query: 3 IFSRFEVI----VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMI 58
+ S +I +A+ L +NR S ++ +G++IG ++I ++ V G +
Sbjct: 1 MNSSLPLIETVSMAFSTLKANRLR------SLLTMLGIVIGNASVITLVGVGRGAQNLAE 54
Query: 59 KRVLGINGHVVI 70
++ + +V+
Sbjct: 55 AQLSNLGANVLF 66
>gi|298482280|ref|ZP_07000467.1| ABC transporter permease [Bacteroides sp. D22]
gi|298271567|gb|EFI13141.1| ABC transporter permease [Bacteroides sp. D22]
Length = 413
Score = 36.3 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 29/234 (12%), Positives = 61/234 (26%), Gaps = 8/234 (3%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIK----RVLGINGHVVIQQKYYPLVDYQFIA 84
S ++ GV G+ L+ ++ G M K + +
Sbjct: 22 SLLTAFGVFWGIFMLVALIGGGQGLEGMMKKNFEGFATNSGFLAAQKTGEAYKGFRKGRW 81
Query: 85 NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDF 144
L+ I + ++ GS + + +
Sbjct: 82 WNLEAIDIERLRSQVKDVEVITPSIARWGSKAVYEDKKYDCSVKGLYPDYLHIESQEMAY 141
Query: 145 DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDN 204
R + ++ + I ++ P D + + Y V+GM
Sbjct: 142 GRFINEVDIQEARKVCVIGKRIYESLFKPGEDPCGKYIRVDGIYYQVIGMSSSEGDMNIQ 201
Query: 205 GM----VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVV 254
G V + Q +NL + I VK + + +I+ +
Sbjct: 202 GRASEAVTLPFTTMQQTYNLGGRIDVICFTVKHGIKVSDVQPEMEQIIKAAHYI 255
>gi|153956000|ref|YP_001396765.1| hypothetical protein CKL_3391 [Clostridium kluyveri DSM 555]
gi|219856341|ref|YP_002473463.1| hypothetical protein CKR_2998 [Clostridium kluyveri NBRC 12016]
gi|146348858|gb|EDK35394.1| Hypothetical protein CKL_3391 [Clostridium kluyveri DSM 555]
gi|219570065|dbj|BAH08049.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 830
Score = 36.3 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 24/188 (12%), Positives = 52/188 (27%), Gaps = 5/188 (2%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+AWR +F +RK A I S +G+ M + ++S MN ++ I + + +
Sbjct: 420 KMAWRNIFRSRKRALIVFISLF--LGITT-FMTVTCLISSMN--MDNFIASYVENDFTLE 474
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ DF+ + + + F
Sbjct: 475 NNTLSIGTTGEKKQKFNEDFLKKIKSIEGITALHTTSLEGMHMKYSPEQFEKHVKWFMKR 534
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
N G + I S I++ + + ++Y
Sbjct: 535 FNIKESMTEKNIQQAFFGYIIGIDSSYIEEFNKSRKKPIDVEAFEKGELALIGTDNPENY 594
Query: 190 TVLGMFRM 197
+ + +
Sbjct: 595 SNVDKMDV 602
>gi|223939173|ref|ZP_03631055.1| protein of unknown function DUF214 [bacterium Ellin514]
gi|223892126|gb|EEF58605.1| protein of unknown function DUF214 [bacterium Ellin514]
Length = 455
Score = 36.3 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 15/163 (9%), Positives = 58/163 (35%), Gaps = 8/163 (4%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ + ++V ++ +++++ S ++ +G+++GV +L+ + +++ G M +
Sbjct: 1 MNLLN--AIVVGFKEIWAHK------FRSLLTMLGIILGVASLVGMSALVKGMENGMKES 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
++ I G ++ + + YQ + V + ++
Sbjct: 53 LIAIGGVERVRLEENDIPAYQQYLADQAVGCTMNDVYALEKSAPLIKMVTPEMRVRDGMM 112
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGIS 163
+ + + + + + D+ +
Sbjct: 113 THGNKSYNAWIFSGTWPNALEMNQHTVEYGRMFNDIDDEQARN 155
>gi|94971657|ref|YP_593705.1| ABC efflux pump, inner membrane subunit [Candidatus Koribacter
versatilis Ellin345]
gi|94553707|gb|ABF43631.1| ABC efflux pump, inner membrane subunit [Candidatus Koribacter
versatilis Ellin345]
Length = 419
Score = 36.3 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 36/74 (48%), Gaps = 9/74 (12%)
Query: 1 MSIFSRFEVIV-AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
M++ EV + +W L NR S ++ +G++ G+ ++ ++++ +GFR+ ++
Sbjct: 1 MNMLK--EVFIESWHALARNRTR------SSLTMLGIVWGITSVTLLIAYGSGFRKVLVD 52
Query: 60 RVLGINGHVVIQQK 73
VVI
Sbjct: 53 GFDAFGRSVVIAWP 66
>gi|261211689|ref|ZP_05925976.1| ABC-type antimicrobial peptide transport system permease component
[Vibrio sp. RC341]
gi|260839039|gb|EEX65671.1| ABC-type antimicrobial peptide transport system permease component
[Vibrio sp. RC341]
Length = 404
Score = 36.3 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 29/232 (12%), Positives = 63/232 (27%), Gaps = 15/232 (6%)
Query: 14 RYLFSNRKNAFI--SIASFISFIGVMIGVMALIVVMSVMNGF---REDMIKRVLGINGHV 68
R L + + S ++ + GV+++I++M++ GF + + + +L V
Sbjct: 2 RILLQQSWQTLLAHRLKSLLAITAISWGVVSVILLMALGEGFYRAQTESFRFLLQETQMV 61
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGG-SGVLVRGISNSDFS 127
Q P + +V Q + +RG
Sbjct: 62 ASGQTSEIWQGMPARRTIQLTEPLMREVAQRPEIQRYSIVYDQREAKITQLRGTPIGSMV 121
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
+S + R + I GI +
Sbjct: 122 SGVDSGYFELAGLKLTVGSRDFSPYDNHNHRRVAILGDQIAANSQMKIGDWVKIRGITFR 181
Query: 188 SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE---------NAVSGIEVF 230
++ RF D+ V++ + ++ + VSG +
Sbjct: 182 VIGIMDDESSRFSFGDSNKVFIPSATFKDIWDQQPNMMSVLPSEGVSGWALR 233
>gi|116617457|ref|YP_817828.1| peptide ABC transporter ATPase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|116096304|gb|ABJ61455.1| ABC-type antimicrobial peptide transport system, ATPase component
[Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293]
Length = 662
Score = 36.3 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+A+ +L + F + +G IGV ++I+ + + NG + + +V
Sbjct: 250 WDMAFDHLKYKKLQNF------LIILGSAIGVFSVILFLGLGNGIKGYINNQVS 297
>gi|326201569|ref|ZP_08191440.1| ABC transporter related protein [Clostridium papyrosolvens DSM
2782]
gi|325988169|gb|EGD48994.1| ABC transporter related protein [Clostridium papyrosolvens DSM
2782]
Length = 784
Score = 35.9 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
MS F+ + +++ + + + AF++ S S IG+ IG+ V++S+ GF++ + K
Sbjct: 241 MSFFT--ALKLSFNNIKTKKWRAFLT--SLASSIGI-IGIA---VILSLSAGFKKQIDKF 292
Query: 61 VL 62
Sbjct: 293 QS 294
>gi|116622905|ref|YP_825061.1| hypothetical protein Acid_3806 [Candidatus Solibacter usitatus
Ellin6076]
gi|116226067|gb|ABJ84776.1| protein of unknown function DUF214 [Candidatus Solibacter
usitatus Ellin6076]
Length = 419
Score = 35.9 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 10/79 (12%), Positives = 29/79 (36%), Gaps = 6/79 (7%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A L N+ F+++ +G+++ LI V ++++G + ++V +
Sbjct: 19 IAVNSLHKNKLRTFLTL------LGIILATTTLIAVTALIHGMNLYIAEKVSNMGSDGFR 72
Query: 71 QQKYYPLVDYQFIANRLDF 89
+ +
Sbjct: 73 VVRMAWFGPWDPKKFMEMQ 91
>gi|307700583|ref|ZP_07637615.1| efflux ABC transporter, permease protein [Mobiluncus mulieris
FB024-16]
gi|307614228|gb|EFN93465.1| efflux ABC transporter, permease protein [Mobiluncus mulieris
FB024-16]
Length = 894
Score = 35.9 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 27/246 (10%), Positives = 61/246 (24%), Gaps = 8/246 (3%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+ R + + + + + VM+GV L + + V N + +
Sbjct: 2 WKLIIREIATRKTRFA------AAVVAVMLGVAFLSLTLGVKNLAMNSLAQAETATLNAD 55
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSY 128
+ I + + G VL+
Sbjct: 56 LYAAGPPVKHANPLDLAARGPINVSQAEVIEAVEGTAHAAPIFEGEAVLLDARKRPLTWG 115
Query: 129 LQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKS 188
+ R +G + L S + + G +
Sbjct: 116 FSATRVRGAYAFPPGPTLKEGRLPSGKTEVMLEESTAQRAGLKVGSQATLIWGGTVHRMQ 175
Query: 189 YTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL 248
+ F M ++ + A+ +F+ E+ V I + ++ E I +
Sbjct: 176 IVGIASFDAP--LGIATMAFVDAKLAKTWFSPESRVKLIGIKASASANLQVVKERIQEAV 233
Query: 249 GNGVVV 254
G +
Sbjct: 234 GPDATI 239
>gi|313624046|gb|EFR94130.1| ABC transporter, permease protein [Listeria innocua FSL J1-023]
Length = 1136
Score = 35.9 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 32/257 (12%), Positives = 70/257 (27%), Gaps = 21/257 (8%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F V R LF ++ ++ +GV G ALI+ GF L
Sbjct: 756 MNFTSKVTARNLFRYKQRM------LMTVLGVA-GCTALILT-----GF-------GLRN 796
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + + +Y ++ Y + P K + S + + +
Sbjct: 797 SISDIAKMQYGQIMKYDAAVYQDMSAPPTAKETYDNLMEDSNIKGKLAMSQTNIDAVKSG 856
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + N D+ + +I +
Sbjct: 857 QSAQASSIIVPKNLNELPDYIVLRDRASHTTEKLTDDGAIISEKLAKLFDIKPGDSITVK 916
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+++ +Y +YM+ Q F+ + + + + +KD EK
Sbjct: 917 NAQNDKYKIKVSAITENYAMHYIYMTPTYYQQIFDEKPSYNLDLLMLKDTS--EKVETEF 974
Query: 245 VRILGNGVVVIDWQQRY 261
L + ++
Sbjct: 975 AEKLTDSKSILTITFSN 991
>gi|239616844|ref|YP_002940166.1| protein of unknown function DUF214 [Kosmotoga olearia TBF 19.5.1]
gi|239505675|gb|ACR79162.1| protein of unknown function DUF214 [Kosmotoga olearia TBF 19.5.1]
Length = 1008
Score = 35.9 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 9/58 (15%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+ +R + ++++ +F + + + G +IG ++ MS+ + F++ + R
Sbjct: 22 LRNRIILKISFKNIFRRKAE------ALLIIAGSLIGTALIVGSMSMNDSFQKFLYSR 73
>gi|311746426|ref|ZP_07720211.1| ABC transporter [Algoriphagus sp. PR1]
gi|126575318|gb|EAZ79650.1| ABC transporter [Algoriphagus sp. PR1]
Length = 801
Score = 35.9 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 8/53 (15%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFRE 55
++ + + +A+R L R +F+++ + + + + A + N F
Sbjct: 1 MWKNY-LKIAFRSLRKRRLFSFVNVIGLVLGLVTFLALFAFVATEWTFNDFHT 52
>gi|326801760|ref|YP_004319579.1| hypothetical protein Sph21_4388 [Sphingobacterium sp. 21]
gi|326552524|gb|ADZ80909.1| protein of unknown function DUF214 [Sphingobacterium sp. 21]
Length = 786
Score = 35.9 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 32/94 (34%), Gaps = 10/94 (10%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + +AWR L N+ + ++I G+ IG+ A ++++S + + + +
Sbjct: 1 MIKNY-IKIAWRNLLKNKGYSILNIT------GLAIGMAAAMLILSWV---QNERSFDLF 50
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKV 96
+ + P
Sbjct: 51 HHKKDQLFLVGNRANWGDKLQVWFYTPKPLGPAA 84
>gi|226226546|ref|YP_002760652.1| hypothetical membrane protein [Gemmatimonas aurantiaca T-27]
gi|226089737|dbj|BAH38182.1| hypothetical membrane protein [Gemmatimonas aurantiaca T-27]
Length = 414
Score = 35.9 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 16/132 (12%), Positives = 41/132 (31%), Gaps = 6/132 (4%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+A + N+ + ++ GV IGV ++ + +V+NG R + + I I
Sbjct: 9 MALEAIRGNKVR------AALTIAGVAIGVFVVVAMGAVVNGIRASFQQDLEEIGATTFI 62
Query: 71 QQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQ 130
Q+ ++ + + G + + + +
Sbjct: 63 VQRRGSGINACDGTDENCPDRRNPPISFAEWDMIRRLPGVQEVIGTMAGQANFAYRNSRV 122
Query: 131 NSFSRFYGNVSN 142
++ +V
Sbjct: 123 DNVGYDAYSVEW 134
>gi|237713898|ref|ZP_04544379.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262409193|ref|ZP_06085737.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294645769|ref|ZP_06723454.1| efflux ABC transporter, permease protein [Bacteroides ovatus SD CC
2a]
gi|294810309|ref|ZP_06768971.1| efflux ABC transporter, permease protein [Bacteroides xylanisolvens
SD CC 1b]
gi|229446054|gb|EEO51845.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262352940|gb|EEZ02036.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638900|gb|EFF57233.1| efflux ABC transporter, permease protein [Bacteroides ovatus SD CC
2a]
gi|294442508|gb|EFG11313.1| efflux ABC transporter, permease protein [Bacteroides xylanisolvens
SD CC 1b]
Length = 413
Score = 35.9 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 29/234 (12%), Positives = 61/234 (26%), Gaps = 8/234 (3%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIK----RVLGINGHVVIQQKYYPLVDYQFIA 84
S ++ GV G+ L+ ++ G M K + +
Sbjct: 22 SLLTAFGVFWGIFMLVALIGGGQGLEGMMKKNFEGFATNSGFLAAQKTGEAYKGFRKGRW 81
Query: 85 NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDF 144
L+ I + ++ GS + + +
Sbjct: 82 WNLEAIDIERLRSKVKDVEVITPSIARWGSKAVYEDKKYDCSVKGLYPDYLHIESQEMAY 141
Query: 145 DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDN 204
R + ++ + I ++ P D + + Y V+GM
Sbjct: 142 GRFINEVDIQEARKVCVIGKRIYESLFKPGEDPCGKYIRVDGIYYQVIGMSSSEGDMNIQ 201
Query: 205 GM----VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVV 254
G V + Q +NL + I VK + + +I+ +
Sbjct: 202 GRASEAVTLPFTTMQQTYNLGGRIDVICFTVKHGIKVSDVQPEMEQIIKAAHYI 255
>gi|45358084|ref|NP_987641.1| hypothetical protein MMP0521 [Methanococcus maripaludis S2]
gi|44920841|emb|CAF30077.1| ABC transporter, permease protein [Methanococcus maripaludis S2]
Length = 415
Score = 35.9 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 35/258 (13%), Positives = 81/258 (31%), Gaps = 19/258 (7%)
Query: 4 FSRFEVI-VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVM--------SVMNGFR 54
++ +A + + S++ S+I+ +G++IG+ ++I ++ SV +
Sbjct: 1 MKPLKLFNMASKMVKSSKLR------SWITILGIVIGIASVIAIISAGDYLSTSVSDQLN 54
Query: 55 EDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGS 114
+ + + L+ I D+ V VS + V +
Sbjct: 55 DMLSDEITLTASAAQGSDDDEDPELTDMDVLILNGISDIEYVDVRVSTRNEVRFAGGRET 114
Query: 115 GVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPY 174
+ S ++D + A + I I I I +
Sbjct: 115 ATITGVDPAVWSQMTDEELSAGRLLQASDSNAVIISYYTATEAFDREIGINQMITIGNKQ 174
Query: 175 GDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGI--EVFVK 232
V + ++ + +G VY + +++ G+ E+
Sbjct: 175 FKVVGILEEDETQGFGQMGGMSSNTVYMPYEAVYTLELDDDASYSISEKEEGVYDEIIFT 234
Query: 233 DPDAIEKTH--ENIVRIL 248
+ + +T ENI + L
Sbjct: 235 LYEDVNQTTALENIQKKL 252
>gi|312886465|ref|ZP_07746074.1| protein of unknown function DUF214 [Mucilaginibacter paludis DSM
18603]
gi|311301093|gb|EFQ78153.1| protein of unknown function DUF214 [Mucilaginibacter paludis DSM
18603]
Length = 802
Score = 35.9 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 10/79 (12%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + +AWR ++ + + S I+ +G+ +G+ +++ + + G + +
Sbjct: 1 MLKNY-IKIAWRNIWKQK------VFSIINILGLSVGIAFTLLIGAYVWGELQVNHQLKN 53
Query: 63 GINGHVVIQQKYYPLVDYQ 81
N +++ + P + ++
Sbjct: 54 ADNQYIIQSKWKDPNMGFE 72
>gi|212211838|ref|YP_002302774.1| export ABC transporter permease protein [Coxiella burnetii
CbuG_Q212]
gi|212010248|gb|ACJ17629.1| export ABC transporter permease protein [Coxiella burnetii
CbuG_Q212]
Length = 397
Score = 35.9 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 23/253 (9%), Positives = 71/253 (28%), Gaps = 11/253 (4%)
Query: 5 SRFEVIV--AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
F + A R L S++ +F ++ +G+++G +++ +++ E + +
Sbjct: 1 MSFIRYIKAALRNLISSKLRSF------LAILGILVGTASVVALITSSQLATEHALDQFK 54
Query: 63 GINGHVVIQQKYYPLVDYQ---FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVR 119
+ +++ Q L IP + ++ A + L + +
Sbjct: 55 ELGTNLLAMDVQPRPGQQQTDVSQQITLAKIPQIKDASQQIALVAPYTSLFNTLYFEGKQ 114
Query: 120 GISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTP 179
+ + + F + + I +P G
Sbjct: 115 TEGQVLGATAELAEIVKIQIDKGRFVSYLDRNSFFCVIGSDVGKDFLAKGIANPIGHQIS 174
Query: 180 MGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEK 239
+G + + F D + + + + ++ + + I +
Sbjct: 175 IGKFVFTIIGVTKHWQPNWFLYADINKGAIIPLATSFFLSKDAQINNLLFRLVPDPDIAE 234
Query: 240 THENIVRILGNGV 252
+ +
Sbjct: 235 VQNALADKMSQLY 247
>gi|86130168|ref|ZP_01048768.1| ABC transporter, permease protein [Dokdonia donghaensis MED134]
gi|85818843|gb|EAQ40002.1| ABC transporter, permease protein [Dokdonia donghaensis MED134]
Length = 411
Score = 35.9 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 29/253 (11%), Positives = 77/253 (30%), Gaps = 18/253 (7%)
Query: 3 IFSRFE--VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+FS F + +A+ + S + ++ + IG+ AL+ ++S++ +
Sbjct: 1 MFSLFRENLRIAFDSIKSQLLR------TILTVFIIAIGITALVGILSLVKALENTISSD 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVS---------GLSS 111
+ + Q+Y ++ + +V F + + ++
Sbjct: 55 FASMGSNTFNVQRYEFTSRRSDEKQVINPVIGYRQVKEFTEQYNYPTARTAISFQGTRTA 114
Query: 112 GGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINIL 171
+ + + +F G I + + S K
Sbjct: 115 EVKYENEKTDPEASVVGVNENFLNNSGLKLEKGRNFTSFDINNNTRVCVLGSDFYKNIFK 174
Query: 172 SPYGDVTPMGMGIRSKSYTVLGMFR-MRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVF 230
+ + + + + F + + V + +Q A+ F N + V
Sbjct: 175 DDNPIGKTISIRGTKFNVIGMLEEKGATFGNNQDLRVLIPIQVARTMFTQPNINYNVSVM 234
Query: 231 VKDPDAIEKTHEN 243
V+D + ++ E
Sbjct: 235 VEDAELLDSAEEE 247
>gi|76798263|ref|ZP_00780511.1| ABC transporter permease protein ylbB [Streptococcus agalactiae
18RS21]
gi|76586374|gb|EAO62884.1| ABC transporter permease protein ylbB [Streptococcus agalactiae
18RS21]
Length = 823
Score = 35.9 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 31/249 (12%), Positives = 74/249 (29%), Gaps = 22/249 (8%)
Query: 3 IFSRFEV--IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
I+ + V R +F ++ ++ GV V L + + + ++ + +
Sbjct: 495 IWKKLSFTQKVTARNIFRYKQRM------IMTIFGVAGSVALLFSGLGIQSSLKQTVNEH 548
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
I + ++ + + L I + + + + +
Sbjct: 549 FGRIMPYDILLTYNTNASPPKILE--LLSKDSKIDKYQPIHLEHLDESIPGQINKQSISL 606
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
L + + + KG+II K LA+ ++ GD I++ +
Sbjct: 607 FITDKKQLLPFIYLQEATTNKSLHLNNKGIIISKKLAQFYHVNTGDFIHLSHSQTLPSRK 666
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ V ++M+ Q + F E + V +
Sbjct: 667 LKITGVVNANVGH------------YIFMTKQYYRTIFKKEAKDNAFLVKLTKHKIANNL 714
Query: 241 HENIVRILG 249
E ++ I G
Sbjct: 715 AEKLLEING 723
>gi|146338097|ref|YP_001203145.1| putative ABC transporter permease [Bradyrhizobium sp. ORS278]
gi|146190903|emb|CAL74908.1| putative ABC transporter, permease protein [Bradyrhizobium sp.
ORS278]
Length = 377
Score = 35.9 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 34/247 (13%), Positives = 72/247 (29%), Gaps = 18/247 (7%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ +A R LF +R + IG++ ++ + V M + GFR + +
Sbjct: 1 MSLQFRLASRNLFHDRLRF------VATVIGIIFSIVLVTVQMGLYVGFRRMVTTMI--- 51
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
H Q P+ F L + L + L +G +
Sbjct: 52 -DHAPAQLWIMPVGTKCFEDPSLLDERQRFRALAVPGVTEATPLVIGYAQWRLPQGTTTP 110
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
F + R + + +A + +
Sbjct: 111 VFVVGSELRGLGLHPWNVVEGRLDDLSVPGAVAIDQTY-------FERLGISGVEQAAEL 163
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTHEN 243
R + V+ + + V+ ++ A+ + + S + V + + KT +
Sbjct: 164 RDRKVQVMAVSKGIRSFTTTPYVFTDVERARSFTGTPASKASYLLVRLASDADLWKTQQA 223
Query: 244 IVRILGN 250
+ LGN
Sbjct: 224 LRDSLGN 230
>gi|16332318|ref|NP_443046.1| hypothetical protein slr0594 [Synechocystis sp. PCC 6803]
gi|1653948|dbj|BAA18858.1| slr0594 [Synechocystis sp. PCC 6803]
Length = 407
Score = 35.9 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A L +N+ S ++ +G++IG +++ ++ + G +E ++ + +
Sbjct: 7 SLKMATSMLLANKLR------SSLTMLGIVIGNASVVAMLGIGQGAQELATSQLEDLGPN 60
Query: 68 VVI 70
V+
Sbjct: 61 VLF 63
>gi|160939780|ref|ZP_02087127.1| hypothetical protein CLOBOL_04671 [Clostridium bolteae ATCC
BAA-613]
gi|158437214|gb|EDP14979.1| hypothetical protein CLOBOL_04671 [Clostridium bolteae ATCC
BAA-613]
Length = 462
Score = 35.9 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 8/48 (16%), Positives = 25/48 (52%), Gaps = 6/48 (12%)
Query: 15 YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
L + + ++ +GV+IG +++V++S+ G + ++++
Sbjct: 13 NLRRRKLR------TVLTVLGVIIGTASIVVMVSLGIGLDQMFMEQIS 54
>gi|150026444|ref|YP_001297270.1| ABC transporter permease [Flavobacterium psychrophilum JIP02/86]
gi|149772985|emb|CAL44469.1| Probable ABC-type transport system, permease component
[Flavobacterium psychrophilum JIP02/86]
Length = 418
Score = 35.9 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 34/282 (12%), Positives = 80/282 (28%), Gaps = 26/282 (9%)
Query: 1 MSIFSRF---EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDM 57
M I+ R A L +N+ + +S +GV +G+ ++I V++ ++ +
Sbjct: 1 MIIYIRLLKESFSFAVNALRNNKLR------TLLSLLGVTVGIFSIIAVLAAVDSLDRKI 54
Query: 58 IKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVL 117
K+ +G + + Y + ++D P+V + +
Sbjct: 55 -KKDIGSLDNSTVFLFKYCFGPSEIPDWKIDQFPNVTYEEYKLLKNNLTDVEAVCYQFYA 113
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
R + + + +D + + + +
Sbjct: 114 GRENIKYESKTVSSIAVIPCTYEFSDIENLDFSEGRFFSEQESNSGENTVVIGADIRNSL 173
Query: 178 TPMGMGIRSKSYTVLGMFR------------MRFPDYDNGMVYMSLQEAQLYFNLENAVS 225
I + FR + F + +Y ++ + F N
Sbjct: 174 FDGVSPIGKEIRLYGQKFRIVGVLKKVGDRMVSFGSNPDTTIYPTVNRIRSLFGDNNKSF 233
Query: 226 GIEVFVKDPDAIE--KTHENIVRILGNGVVVIDWQQRYQIFF 265
V +K I+ I + + N + + FF
Sbjct: 234 TPIVIIKPAKNIDTESLKGQIAQKIRNFRGIKS-GEMN-NFF 273
>gi|153855793|ref|ZP_01996794.1| hypothetical protein DORLON_02815 [Dorea longicatena DSM 13814]
gi|149751920|gb|EDM61851.1| hypothetical protein DORLON_02815 [Dorea longicatena DSM 13814]
Length = 1112
Score = 35.9 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 27/257 (10%), Positives = 65/257 (25%), Gaps = 20/257 (7%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
F R L +K F ++ G+ G MAL++ V G ++ + + + I
Sbjct: 731 MNFTWKSTIRNLMRYKKRFF------MTIFGIG-GCMALML---VGYGVKDSVYE-IADI 779
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ + + + + +K + S S +
Sbjct: 780 QYDEIQLYDGHIFYKDDVTKTEKEELKEYLKEDTDIQTYMDARMQSVTASKGNKKRSVYQ 839
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ ++ + + +
Sbjct: 840 CVLGNPDIVGKYEDFHDRKTKESYKLTDNGAI--------VSEKTAKLLNVKEGDTINLK 891
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ V +Y +Y + Q + + + I KD + E+ +
Sbjct: 892 DGMAKGVTVKIAYICENYMGHYMYFTPQYYKKVYGKTAEYNCIMFRAKDGYSEEQVKKAG 951
Query: 245 VRILGNGVVVIDWQQRY 261
+IL V+ +
Sbjct: 952 EKILAKD-QVLTISYLH 967
>gi|188586693|ref|YP_001918238.1| protein of unknown function DUF214 [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179351380|gb|ACB85650.1| protein of unknown function DUF214 [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 797
Score = 35.9 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 40/232 (17%), Positives = 75/232 (32%), Gaps = 22/232 (9%)
Query: 2 SIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+F+ + +A R +F NR S F+G+ + + + S+ N + +I
Sbjct: 413 KMFT-IQGKMAIRNIFRNRGR------SIFLFVGITLSCAVVALTWSL-NELIDLLIFYQ 464
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ V+ L+ V V P +S L + L+
Sbjct: 465 HEEVETYDARVNLSNPVEIDVGRRELESNSVVEHVEPLNEIPITLSHLGNSEDIALLGIT 524
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
SD + +S D ++ +G+I+ + LA L ++ GD + SPY
Sbjct: 525 GTSDMYTILDSDENQI-----DLEKTQGIILSERLAEKLNVTQGDSLEFESPYLRNGDNS 579
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKD 233
+ Y YM + + N + V + D
Sbjct: 580 RPVEVDKTVP---------QYLGMNAYMEVGNLAGLLDQGNITTSYMVNLND 622
>gi|284041694|ref|YP_003392034.1| hypothetical protein Cwoe_0223 [Conexibacter woesei DSM 14684]
gi|283945915|gb|ADB48659.1| protein of unknown function DUF214 [Conexibacter woesei DSM
14684]
Length = 422
Score = 35.9 bits (80), Expect = 5.9, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
+ +S +G+ IGV A++ V+ V R ++ +
Sbjct: 55 AALSALGIAIGVAAMVAVLGVGESSRTRVLDQ 86
>gi|311029809|ref|ZP_07707899.1| hypothetical protein Bm3-1_04514 [Bacillus sp. m3-13]
Length = 331
Score = 35.9 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 27/211 (12%), Positives = 51/211 (24%), Gaps = 7/211 (3%)
Query: 59 KRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
+ +G H + + N ++P I F + S
Sbjct: 117 QSFVGEFDHHTTNSPLAMEMYKKAGINNTHYMPFAIDSRFFTPHKPINKYKSDVSIIGHF 176
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
R LQ +F V + K+ + P
Sbjct: 177 RPNRLEAAKALQENFRCKIFGRGWPLPSMGPVYDDEWFKAMYS----TKMVVNFPLTGAG 232
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
+ + G + + +E Y + + + I F++ PD E
Sbjct: 233 YTNVKVGIFEAAATGRLIFTEYFEEMEHFFEYGKEIIAYSDEADLIKKIRYFLQHPDEAE 292
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFFSCYE 269
W+QR + FF +
Sbjct: 293 AIGLAGQNKCAEKH---TWKQRLETFFQKVQ 320
>gi|309802765|ref|ZP_07696868.1| efflux ABC transporter, permease protein [Bifidobacterium dentium
JCVIHMP022]
gi|308220604|gb|EFO76913.1| efflux ABC transporter, permease protein [Bifidobacterium dentium
JCVIHMP022]
Length = 1098
Score = 35.9 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 30/258 (11%), Positives = 73/258 (28%), Gaps = 20/258 (7%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
F V R +F + F ++ GV V L + V + ++ +
Sbjct: 718 NFTRKVTARNIFRYKMRMF------MTIFGVCGAVSLLTAGLGVQASIGQIGERQFDELI 771
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+ +I + Q + D + + + ++ D
Sbjct: 772 HYDLIAVEQSSTNSAQIDELKKALNKDSVSSSIAAHYEELSKTSGKNSDKQQITLLATDD 831
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ + I + +S +++ + G+
Sbjct: 832 AYNFGTYLTLRDRSSHEKRIMVNDGAI-----ISERLSEMLHVSVGDSFSVTDAGGVEHT 886
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD--AIEKTHEN 243
K + M+ V+M+ Q + F + + + V +KD E+
Sbjct: 887 VKVSGICEMY-------IGHFVFMNAQCYEKMFGTDYSENSYMVRLKDSSVANAERQGAR 939
Query: 244 IVRILGNGVVVIDWQQRY 261
++++ VV + Q+
Sbjct: 940 LMKLSAVQSVVQNTTQKN 957
>gi|307298236|ref|ZP_07578040.1| protein of unknown function DUF214 [Thermotogales bacterium
mesG1.Ag.4.2]
gi|306916322|gb|EFN46705.1| protein of unknown function DUF214 [Thermotogales bacterium
mesG1.Ag.4.2]
Length = 1004
Score = 35.9 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 9/61 (14%), Positives = 28/61 (45%), Gaps = 7/61 (11%)
Query: 2 SIF-SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
S+ + + +R ++ + + F+ I G +IG ++ M++ + F+ + +
Sbjct: 20 SMIRNPIIFKIGYRNIYRRKSDTFLVIM------GSLIGTALIMGSMAMNDSFQNFLYGQ 73
Query: 61 V 61
+
Sbjct: 74 I 74
>gi|306822793|ref|ZP_07456170.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Bifidobacterium dentium ATCC 27679]
gi|304553943|gb|EFM41853.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Bifidobacterium dentium ATCC 27679]
Length = 1097
Score = 35.9 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 30/258 (11%), Positives = 73/258 (28%), Gaps = 20/258 (7%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
F V R +F + F ++ GV V L + V + ++ +
Sbjct: 717 NFTRKVTARNIFRYKMRMF------MTIFGVCGAVSLLTAGLGVQASIGQIGERQFDELI 770
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
+ +I + Q + D + + + ++ D
Sbjct: 771 HYDLIAVEQSSTNSAQIDELKKALNKDSVSSSIAAHYEELSKTSGKNSDKQQITLLATDD 830
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ + I + +S +++ + G+
Sbjct: 831 AYNFGTYLTLRDRSSHEKRIMVNDGAI-----ISERLSEMLHVSVGDSFSVTDAGGVEHT 885
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD--AIEKTHEN 243
K + M+ V+M+ Q + F + + + V +KD E+
Sbjct: 886 VKVSGICEMY-------IGHFVFMNAQCYEKMFGTDYSENSYMVRLKDSSVANAERQGAR 938
Query: 244 IVRILGNGVVVIDWQQRY 261
++++ VV + Q+
Sbjct: 939 LMKLSAVQSVVQNTTQKN 956
>gi|253572499|ref|ZP_04849901.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|298387845|ref|ZP_06997395.1| ABC transporter permease [Bacteroides sp. 1_1_14]
gi|251837914|gb|EES66003.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|298259450|gb|EFI02324.1| ABC transporter permease [Bacteroides sp. 1_1_14]
Length = 413
Score = 35.9 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 29/234 (12%), Positives = 62/234 (26%), Gaps = 8/234 (3%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIK----RVLGINGHVVIQQKYYPLVDYQFIA 84
S ++ GV G+ L+ ++ G ++ M K + +
Sbjct: 22 SLLTAFGVFWGIFMLVALIGGGQGLQDMMQKNFEGFATNSGFLAAQKTGEAYKGFRKGRW 81
Query: 85 NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDF 144
L+ I + ++ GS + + +
Sbjct: 82 WDLEAIDIERLRSQVKDVEVITPSVARWGSNAIYGDKKYDCSVKGLYPDYLHIESQEMAY 141
Query: 145 DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDN 204
R + ++ + I ++ P D + + Y V+GM
Sbjct: 142 GRFINDVDIREARKVCVIGKRVYESLFKPGEDPCGKYVRVDGIYYQVIGMSSSEGDMNIQ 201
Query: 205 GM----VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVV 254
G V + Q +NL + I VK + + I+ +
Sbjct: 202 GRASEAVTLPFTTMQQTYNLGGQIDVICFTVKRGVKVSDVQPQMEEIIKAAHYI 255
>gi|196234522|ref|ZP_03133345.1| protein of unknown function DUF214 [Chthoniobacter flavus Ellin428]
gi|196221402|gb|EDY15949.1| protein of unknown function DUF214 [Chthoniobacter flavus Ellin428]
Length = 414
Score = 35.9 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 33/225 (14%), Positives = 66/225 (29%), Gaps = 11/225 (4%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKR--VLGINGHVVIQQKYYPLVDYQFIANR 86
S ++ +GV++GV ++I+VM+ M + ++ + LG VV + + +
Sbjct: 26 SALTLLGVLVGVFSIILVMTAMRAMQNNIENQLGGLGAKTFVVQKMPGAYFGGREGLMKF 85
Query: 87 LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDR 146
QA + + +++ N +R
Sbjct: 86 WRRHDVDYPQAQRFERQANFAPHIGLHTNFTTSEVTSIYGKTPPNVMVGGVTPGVFVVNR 145
Query: 147 GKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMF--------RMR 198
L +L S + + P G + + +
Sbjct: 146 WDIAEGRALLESDLESSRDVCVLNDVVARALFPHGSAVGQRIKIAAIPYTVVGVFENTTS 205
Query: 199 FPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
NG+V + L + +S I V V D + T E
Sbjct: 206 GNMEVNGLVQIPLTTGLNRYGRTREIS-ILVTVDDAATFDDTVEQ 249
>gi|219783957|ref|YP_002477409.1| efflux ABC transporter, permease protein [Borrelia garinii Far04]
gi|219694500|gb|ACL35022.1| efflux ABC transporter, permease protein [Borrelia garinii Far04]
Length = 391
Score = 35.9 bits (80), Expect = 6.1, Method: Composition-based stats.
Identities = 47/240 (19%), Positives = 87/240 (36%), Gaps = 15/240 (6%)
Query: 39 GVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLP 98
V+ L+V + MN RE M K + GH+ I ++ Y + + N L I ++
Sbjct: 8 SVVFLLVFVGYMNFSREGMEKSFVSSTGHIQIAKENYFNPKFSSLKNELLLEEKDINLIR 67
Query: 99 FVSGQAFVSGLSS-----------GGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRG 147
++ + V + D + +S S G + G
Sbjct: 68 DEIVGYDELQSTNLIVNFDGLLGNSSTSNPVFAFAYEDPDIITSSLSLLEGEPIFNDSNG 127
Query: 148 KGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMV 207
++G +LA + GI + N +G G+ ++ V G+ + F DN
Sbjct: 128 GEFLLGSNLAASFGIEKIMETNSDLTLMTN-LLGRGLNFQNIKVAGIVKFPFSTADNIFA 186
Query: 208 YMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI---VRILGNGVVVIDWQQRYQIF 264
+++ + F E I+VF+KD +E + + + G DW + F
Sbjct: 187 ITTIKTLKDLFAFEGGAHVIQVFLKDNSTLETFKKKLDNFKKNKGIAFDYNDWFEINPYF 246
>gi|255527222|ref|ZP_05394105.1| protein of unknown function DUF214 [Clostridium carboxidivorans P7]
gi|255509086|gb|EET85443.1| protein of unknown function DUF214 [Clostridium carboxidivorans P7]
Length = 418
Score = 35.9 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 9/101 (8%), Positives = 35/101 (34%)
Query: 166 DKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVS 225
+K G + + + ++ + +S + + ++
Sbjct: 194 NKEKYYINSKTSIKSGSSQMNFNIKKVTDQQVVSYFITTKTIIVSDKAFSDLSSKGEVIN 253
Query: 226 GIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQRYQIFFS 266
V++P+ ++ + + +++ G+ + + YQ F+
Sbjct: 254 ITGYLVQNPERSKELTKELSKVVPQGIYIDSYYDTYQGFYK 294
>gi|257784036|ref|YP_003179253.1| hypothetical protein Apar_0230 [Atopobium parvulum DSM 20469]
gi|257472543|gb|ACV50662.1| protein of unknown function DUF214 [Atopobium parvulum DSM 20469]
Length = 402
Score = 35.9 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
L +NR S ++ +G++IG+ A+I + ++++G + ++ + +V+ +
Sbjct: 14 LNANRGR------SLLTVLGIVIGISAVITMTALIDGIKYSLVSSLGLNQSRMVMIYAWP 67
Query: 76 PLVDYQFIANRLD 88
Q L
Sbjct: 68 DREVTQQDLEMLQ 80
>gi|163787784|ref|ZP_02182231.1| putative FtsX-related transmembrane transport protein
[Flavobacteriales bacterium ALC-1]
gi|159877672|gb|EDP71729.1| putative FtsX-related transmembrane transport protein
[Flavobacteriales bacterium ALC-1]
Length = 810
Score = 35.9 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIV 45
+ + +AWR L N+ I+I IG I + ++
Sbjct: 1 MIKNY-FKIAWRNLLKNKGFTIINIIGLSLGIGCFIMISMFVI 42
>gi|284039475|ref|YP_003389405.1| hypothetical protein Slin_4628 [Spirosoma linguale DSM 74]
gi|283818768|gb|ADB40606.1| protein of unknown function DUF214 [Spirosoma linguale DSM 74]
Length = 795
Score = 35.9 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 22/248 (8%), Positives = 64/248 (25%), Gaps = 16/248 (6%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + +A+R L+ NR + S ++ +G+ +G+ A+ ++ + +
Sbjct: 1 MLRNY-LKIAFRNLWKNR------LFSTLNIVGMGVGIAAVGLMT-------LYVWHELS 46
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H + + + Q+ L P + + + I+
Sbjct: 47 YDRFHANANRIFRVVHYAQWAGGNLQLAPTSAPFADALKKEYPEIEKTVRLHPEGGGMIT 106
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
++ + F D + A I ++ +
Sbjct: 107 YK-DKKIEANDIMFADQSVFDVFTLPFLYGNPAAALTQPQRIVLTKSLAEKLFGDPAKAI 165
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLY-FNLENAVSGIEVFVKDPDAIEKTH 241
G + ++ + N N +++
Sbjct: 166 GQTVEFSNNFPNTVAGVIADIPTNSHVHFSALRSLPANYTNGWQSFDLYTYILLNKATDA 225
Query: 242 ENIVRILG 249
+ + L
Sbjct: 226 KALEAKLP 233
>gi|91218178|ref|ZP_01255126.1| putative FtsX-related transporter permease [Psychroflexus torquis
ATCC 700755]
gi|91183636|gb|EAS70031.1| putative FtsX-related transporter permease [Psychroflexus torquis
ATCC 700755]
Length = 237
Score = 35.9 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 13/128 (10%), Positives = 36/128 (28%), Gaps = 1/128 (0%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + +A R L+ NR +++ + GV I + + F +
Sbjct: 1 MILNY-FKIALRNLWKNRTFTALNMVGLTAAFGVAILLAMFAFFQLSYDRFHDHGENLYQ 59
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+ + + + A+ L ++ + +G + + +
Sbjct: 60 VYSEDSELNGIKANISKSEPFASALRDEISGVEKITRYNGSGVLLNYEDKQLQMNGAYVD 119
Query: 123 NSDFSYLQ 130
F
Sbjct: 120 PDFFYMFS 127
>gi|260060639|ref|YP_003193719.1| putative ABC transporter [Robiginitalea biformata HTCC2501]
gi|88784769|gb|EAR15938.1| putative ABC transporter [Robiginitalea biformata HTCC2501]
Length = 414
Score = 35.9 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 29/232 (12%), Positives = 68/232 (29%), Gaps = 10/232 (4%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
+ N+ F++ S S G+ L++++ G + + V
Sbjct: 14 IRKNKLRTFLTGLSVAS------GIFILVILLGFGQGMQNGIAHEFEQDASTSVWVWPGM 67
Query: 76 PLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSR 135
++Y+ + + + S V ++ + + +
Sbjct: 68 TTMEYKGMNPGRRIQLRNGNFEYWSRAEGDRIERESPRLFVRDVSVNYGNEALVYGIHGV 127
Query: 136 FYGNVSNDFDRGKG---VIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVL 192
G + + + + + + IGDKI TP+G I
Sbjct: 128 ASGFQFIENAKMSQGRFINLTDIESTAKVVVIGDKIRKDVFGHLETPIGEYIEFSGLPFK 187
Query: 193 GM-FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ + + +Y+ L AQ FN + VS + + ++
Sbjct: 188 IVGVYKELREREEETLYIPLTTAQKVFNGGDRVSNLAYTLPPAGNFDQAVAE 239
>gi|284039468|ref|YP_003389398.1| hypothetical protein Slin_4621 [Spirosoma linguale DSM 74]
gi|283818761|gb|ADB40599.1| protein of unknown function DUF214 [Spirosoma linguale DSM 74]
Length = 791
Score = 35.9 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 30/256 (11%), Positives = 69/256 (26%), Gaps = 25/256 (9%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + + +AWR L N+ +FI+I+ G+ G+ I M G
Sbjct: 1 MIRNY-LKIAWRNLTKNKVYSFINIS------GLATGMAVTI-----MIGLWVYDELSFD 48
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
H + + V + + +P + F + V
Sbjct: 49 RQTKHYDRIAQLWQFVTFDVEKTSYNSLPIPLAQELRSKYPDFELVSLASFDRTAVLASG 108
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGM 182
+ F+ N + + + D+ L + K + + +
Sbjct: 109 ENRFTKTGNYVEPDFLPMMSVKMLVGTYRGLTDVNSILLSAATAKNLFGTADPINKLIKL 168
Query: 183 GIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSG-----------IEVFV 231
+ ++++ +L + G I V +
Sbjct: 169 DNKVNVRVTGVYEDFPQNSSFKATLFLAP--WRLLMAINENARGQLDQWDSNGFPIYVQL 226
Query: 232 KDPDAIEKTHENIVRI 247
K+ + ++ I I
Sbjct: 227 KNGVSADQASARIKDI 242
>gi|77407189|ref|ZP_00784167.1| permease domain protein [Streptococcus agalactiae H36B]
gi|77174202|gb|EAO77093.1| permease domain protein [Streptococcus agalactiae H36B]
Length = 488
Score = 35.9 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 31/249 (12%), Positives = 74/249 (29%), Gaps = 22/249 (8%)
Query: 3 IFSRFEV--IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
I+ + V R +F ++ ++ GV V L + + + ++ + +
Sbjct: 107 IWKKLSFTQKVTARNIFRYKQRM------IMTIFGVAGSVALLFSGLGIQSSLKQTVNEH 160
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
I + ++ + + L I + + + + +
Sbjct: 161 FGRIMPYDILLTYNTNASPPKILE--LLSKDSKIDKYQPIHLENLDESIPGQINKQSISL 218
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
L + + + KG+II K LA+ ++ GD I++ +
Sbjct: 219 FITDKKQLLPFIYLQEATTNKSLHLNNKGIIISKKLAQFYHVNTGDFIHLSHSQTLPSRK 278
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ V ++M+ Q + F E + V +
Sbjct: 279 LKITGVVNANVGH------------YIFMTKQYYRTIFKKEAKDNAFLVKLTKHKIANNL 326
Query: 241 HENIVRILG 249
E ++ I G
Sbjct: 327 AEKLLEING 335
>gi|323704623|ref|ZP_08116201.1| protein of unknown function DUF214 [Thermoanaerobacterium
xylanolyticum LX-11]
gi|323536085|gb|EGB25858.1| protein of unknown function DUF214 [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 390
Score = 35.9 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 16/116 (13%), Positives = 49/116 (42%), Gaps = 8/116 (6%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M++ + ++ + + N+ +F ++ +G++IGVM++I ++S+ G E + +
Sbjct: 1 MALMQ--AIKMSLKSIIDNKLRSF------LTMLGIVIGVMSVIGLVSLGQGATEGVTSQ 52
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
+ + ++++ +D ++ I D + + + G
Sbjct: 53 IKSMGSNLIMVSIMGRGMDTSLSYSQAMSIGDSPYISQISPIMSANAYAKYGDQSY 108
>gi|302390678|ref|YP_003826499.1| protein of unknown function DUF214 [Thermosediminibacter oceani DSM
16646]
gi|302201306|gb|ADL08876.1| protein of unknown function DUF214 [Thermosediminibacter oceani DSM
16646]
Length = 436
Score = 35.9 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 49/130 (37%), Gaps = 2/130 (1%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRV--LGINGHVVIQQKYYPLVDYQFIANR 86
S ++ +GV IGV ++I +M + G R ++++ LG N V+ +
Sbjct: 21 SGLTVLGVAIGVASVISLMGIGEGARLAVVRQFKSLGSNVIVIKAHDVKAEFQPEEAREL 80
Query: 87 LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDR 146
L+ + + P A + + G ++ S+ S + + R
Sbjct: 81 LERVSGLEYASPVARTNAVMKWRRARGQVDILGVSSDFPQLRDHKLVSGRFFTPWHVEQR 140
Query: 147 GKGVIIGKDL 156
++G ++
Sbjct: 141 SSVAVLGYNI 150
>gi|153837800|ref|ZP_01990467.1| ABC-type antimicrobial peptide transport system, permease component
[Vibrio parahaemolyticus AQ3810]
gi|149748821|gb|EDM59660.1| ABC-type antimicrobial peptide transport system, permease component
[Vibrio parahaemolyticus AQ3810]
Length = 404
Score = 35.9 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 21/228 (9%), Positives = 62/228 (27%), Gaps = 6/228 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQ----FIA 84
S ++ I + GV++++V++++ GF + + +V + +Q
Sbjct: 19 SVLAIIAIAWGVISVVVLIALGEGFYRHQTQSFSFMVNNVQVVFPSSTSKPWQGLASRRQ 78
Query: 85 NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDF 144
+ + QA + ++G + S ++
Sbjct: 79 IDIPQEKVDMIKQSGFVQQASSVYAKWDANITNLKGQNLSSTVSGIDTSYFPLIQRKLQS 138
Query: 145 DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDN 204
+ + + GI + D+
Sbjct: 139 GSRNLSPSDMKNHTRVAVLGDQIAQMGGIQIGDRLKVNGIPFLVIGITVGEDTGISFGDS 198
Query: 205 GMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGV 252
V++ + ++ + + + + +D +NIV +
Sbjct: 199 RTVFIPQTTYRDLWDAKPWM--VLMKPRDGMDAPSFRQNIVNFFAKQL 244
>gi|124008071|ref|ZP_01692770.1| transporter [Microscilla marina ATCC 23134]
gi|123986485|gb|EAY26291.1| transporter [Microscilla marina ATCC 23134]
Length = 411
Score = 35.9 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 40/258 (15%), Positives = 83/258 (32%), Gaps = 17/258 (6%)
Query: 23 AFISIASFISFIGVMIGVMA-LIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQ 81
I+I++ V + VM + V S+ + + + I H L +
Sbjct: 17 TIITISAIF--FAVFLSVMQRSMKVGSIERTIDQMVGAFLGHIQVHQKGYWDEQNLDNSF 74
Query: 82 FIANRLDFIPDVIKVLPFVSGQAFVSGLS---SGGSGVLVRGISNSDFSYLQNSFSRFYG 138
+ L + V + L L+ GI L N +
Sbjct: 75 ANSPTLLQTIKQTPGVAQVIPRLDSYALVAGLERSRAGLIMGIDPIAEKQLSNPEKKLVK 134
Query: 139 NVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMR 198
+ ++I + LA+ L + +GD + +L K +M
Sbjct: 135 GKYLAKANEEALLIAQGLAQYLKVQMGDSLVLLGQGFQGQSATGKYLVKGI-----IKMP 189
Query: 199 FPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRIL------GNGV 252
P + +VY+ ++ AQ F E+ ++ + + + + + ++ + L G
Sbjct: 190 DPKLNKALVYLPIKTAQSLFATESRLTTYCIRLDNAKNLTRVRASLQQNLAETPPKGVAY 249
Query: 253 VVIDWQQRYQIFFSCYES 270
VI W+ E+
Sbjct: 250 EVISWKTMAPELVQMMEA 267
>gi|297621366|ref|YP_003709503.1| putative ABC transporter, permease protein [Waddlia chondrophila
WSU 86-1044]
gi|297376667|gb|ADI38497.1| putative ABC transporter, permease protein [Waddlia chondrophila
WSU 86-1044]
Length = 680
Score = 35.9 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 39/87 (44%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
FE+ +A++YL + +SI S IS + + + V ++V SV +G + +++ +
Sbjct: 2 FELSIAFKYLVPRWRQLSVSIISLISILVIALVVWLIVVFFSVTHGLERGWVDKLIALTA 61
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDV 93
V I Y ++ + +
Sbjct: 62 PVRITPTEDYYNSYYYLIDSISQESGY 88
>gi|95930266|ref|ZP_01313004.1| protein of unknown function DUF214 [Desulfuromonas acetoxidans DSM
684]
gi|95133729|gb|EAT15390.1| protein of unknown function DUF214 [Desulfuromonas acetoxidans DSM
684]
Length = 401
Score = 35.9 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 33/237 (13%), Positives = 66/237 (27%), Gaps = 14/237 (5%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMI------KRVLGINGHVVIQQKYYPLVDYQF 82
+ ++ V GV+ LIV S+ G E MI + + L
Sbjct: 18 TLLTGSLVAFGVVCLIVFQSLKVGMHEQMIVSTTSLDNGILQIHDPDYRPNRSLLQPIND 77
Query: 83 IANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSN 142
A ++ + A + S + + GIS + + ++
Sbjct: 78 SATLIERLDQHQIRYAERLKTAALLLAGPQSSMISLSGISPEHEAQVTQISNQMREGTYL 137
Query: 143 DFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDY 202
+ A +L ++ + G + + T L F
Sbjct: 138 GRSNTIVLSQALCQALSLSLNDQVTVMAQDSAGQPALAKLTVVGIFSTGLPSFDTTHG-- 195
Query: 203 DNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQ 259
Y+ L Q +S I + + D ++ +L + WQ+
Sbjct: 196 -----YVELATLQQLIKAPQVISEISIHTQ-LDNQNDMETRLLPLLNKDQRITRWQE 246
>gi|325286795|ref|YP_004262585.1| hypothetical protein Celly_1891 [Cellulophaga lytica DSM 7489]
gi|324322249|gb|ADY29714.1| protein of unknown function DUF214 [Cellulophaga lytica DSM 7489]
Length = 409
Score = 35.9 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 39/286 (13%), Positives = 80/286 (27%), Gaps = 25/286 (8%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+FSR + + N+ F+S + V IG+ +V+ NG K
Sbjct: 1 MFSRDAWKEIFETIQKNKLRTFLSGFT------VAIGIFIFVVLFGFGNGLTNTFAKFFG 54
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
+V V Y D + A +
Sbjct: 55 DDATNVFFIFPGRTSVPYSGYKADRQIEFDNSDLEDIEKNFAMFVDYVTPRITRGGLVKY 114
Query: 123 NSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKD-LARNLGISIGDKINILSPYGDVTPMG 181
++ + N + KG I + ++ ++ + +G
Sbjct: 115 KNESNNYTNMGVAPSHQFNEKTIIMKGRYINNQDIKDKTKYAVIGRLVEKDLFKGEESLG 174
Query: 182 MGIRS--KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFV-------- 231
I S+ V+G+F+ D + +Y+ QL + + I +
Sbjct: 175 EYIDIAGSSFKVIGVFQDDGGDNEERKIYIPYTTRQLIEKNTDKIGQIVLGFRPQIGYSG 234
Query: 232 -----KDPDAIEKTHENIVRILGNGVVVIDWQQ---RYQIFFSCYE 269
+ K+ + I NG+ + + + Q S +
Sbjct: 235 AMSLENSLEKYLKSKKFINPNDENGLFIRNIADQLKQNQQLASVLQ 280
>gi|29347906|ref|NP_811409.1| putative ABC transporter ATP-binding protein [Bacteroides
thetaiotaomicron VPI-5482]
gi|29339808|gb|AAO77603.1| putative ABC transporter, ATP-binding protein [Bacteroides
thetaiotaomicron VPI-5482]
Length = 413
Score = 35.9 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 29/234 (12%), Positives = 62/234 (26%), Gaps = 8/234 (3%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIK----RVLGINGHVVIQQKYYPLVDYQFIA 84
S ++ GV G+ L+ ++ G ++ M K + +
Sbjct: 22 SLLTAFGVFWGIFMLVALIGGGQGLQDMMQKNFEGFATNSGFLAAQKTGEAYKGFRKGRW 81
Query: 85 NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDF 144
L+ I + ++ GS + + +
Sbjct: 82 WDLEAIDIERLRSQVKDVEVITPSVARWGSNAIYGDKEYDCSVKGLYPDYLHIESQEMAY 141
Query: 145 DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDN 204
R + ++ + I ++ P D + + Y V+GM
Sbjct: 142 GRFINDVDIREARKVCVIGKRVYESLFKPGEDPCGKYVRVDGIYYQVIGMSSSEGDMNIQ 201
Query: 205 GM----VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVV 254
G V + Q +NL + I VK + + I+ +
Sbjct: 202 GRASEAVTLPFTTMQQTYNLGGQIDVICFTVKRGVKVSDVQPQMEEIIKAAHYI 255
>gi|313676376|ref|YP_004054372.1| hypothetical protein Ftrac_2285 [Marivirga tractuosa DSM 4126]
gi|312943074|gb|ADR22264.1| protein of unknown function DUF214 [Marivirga tractuosa DSM 4126]
Length = 841
Score = 35.9 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
+ +AWR NR F+ ++S +++G+ AL+ + S + E +
Sbjct: 8 LKMAWRDSRRNRSRLFLFMSS------IVLGIAALVAINSFGDNLTEQINS 52
>gi|325300144|ref|YP_004260061.1| hypothetical protein Bacsa_3060 [Bacteroides salanitronis DSM
18170]
gi|324319697|gb|ADY37588.1| protein of unknown function DUF214 [Bacteroides salanitronis DSM
18170]
Length = 416
Score = 35.9 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 16/201 (7%), Positives = 58/201 (28%), Gaps = 2/201 (0%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFRE--DMIKRVLGINGHVVIQQKYYPLVDYQFIANR 86
+ ++ V G+ LIV++ NG + + +N + +
Sbjct: 19 TALTGFSVAWGIFMLIVLLGAGNGLIHAFEGQSEDMKMNSMKIYPGYTSKVYKGMQEGRN 78
Query: 87 LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDR 146
+ ++ + ++ ++ + + + Y ++ +
Sbjct: 79 ISLDNRDRELSETAFPEHVITTGATISQNDVTLINGKEFLTISIDGVFPNYPDLEAVKLK 138
Query: 147 GKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGM 206
I +D+ + + K + + + P+G + + + + +
Sbjct: 139 EGRFINERDMEEERKVIVLHKKTVETLFPHQHPIGKYVNANGVAYQIVGIYEDQNSFSPS 198
Query: 207 VYMSLQEAQLYFNLENAVSGI 227
Q + +++ I
Sbjct: 199 ALAPFTTIQAVYAKGDSIDNI 219
>gi|320535424|ref|ZP_08035533.1| efflux ABC transporter, permease protein [Treponema phagedenis
F0421]
gi|320147711|gb|EFW39218.1| efflux ABC transporter, permease protein [Treponema phagedenis
F0421]
Length = 415
Score = 35.9 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 33/258 (12%), Positives = 70/258 (27%), Gaps = 25/258 (9%)
Query: 12 AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQ 71
A + L N+ + +S +G+ IGV A++V+ ++ + M K ++
Sbjct: 8 ALQSLKHNKLR------TVLSLLGIAIGVTAVVVITTMGSSLYGSMQKLFGPGKMDIMHL 61
Query: 72 QKYYPLVDYQFIA--------NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISN 123
+ + +P + V + V S G+ + G+
Sbjct: 62 YPGWDYNTRKQTIELTEKYRSELKKSVPGIKTVYYTDGNSSKVFSQFSDGAARGITGVEY 121
Query: 124 SDFSYLQNSFSRFYGNVSNDFDRGKGVII-----------GKDLARNLGISIGDKINILS 172
+ + +DF + +I ++ D
Sbjct: 122 GNMEANNIKLAYGSYFSISDFANHRNKVIIGEKLAQELFPQGHPIGQTLKTVIDHWGYTE 181
Query: 173 PYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVK 232
+ VL F + +YM + EV V
Sbjct: 182 SGRLGITYRELFAFEVIGVLEPTNNPFVRQTDYAIYMPRSSLLQMGGSGDRADSAEVQVY 241
Query: 233 DPDAIEKTHENIVRILGN 250
+ ++K E+I
Sbjct: 242 FEEKMDKVMEDIRAFSNE 259
>gi|291280251|ref|YP_003497086.1| ABC transporter permease [Deferribacter desulfuricans SSM1]
gi|290754953|dbj|BAI81330.1| ABC transporter, permease [Deferribacter desulfuricans SSM1]
Length = 833
Score = 35.9 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 32/243 (13%), Positives = 75/243 (30%), Gaps = 24/243 (9%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
R I A R L + + S IS GV +GV + +S++N + + I
Sbjct: 6 RLIFIFALRNLKEEK------LFSLISIFGVALGVG---LFLSILNSTQSAIKSMSSDIE 56
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
I + + I + ++ + + +
Sbjct: 57 KLNPIANYEINDKFGKPFDESIIKILNDRQIRNYPVIKNNAQSEDEKLVIPIFAIDLLKA 116
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+ ++ + F + + I D+A+ L + + +++ + + I
Sbjct: 117 IKNSNIDITDSNLDLQSFFQKQNAIFITDDIAKRLKVKVNEELFLNVDGRKKFFIAGIID 176
Query: 186 SKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIV 245
S+ +Y + Q F VS I+V ++ + +++ +
Sbjct: 177 SEQV--------------PSGIYQDIGNFQEEFKFFGKVSRIDVNLEQ-EQVDELKSLLP 221
Query: 246 RIL 248
L
Sbjct: 222 ANL 224
Score = 35.1 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 24/242 (9%), Positives = 68/242 (28%), Gaps = 26/242 (10%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+++ +FS+ I++ S V I +I ++++++ F+ + K
Sbjct: 463 FISFADIFSSSYRFAIALIS------VAISTALVISMVTLIDSFKISLTK---------- 506
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+D A+ F GV +
Sbjct: 507 -------WIDNNLRADIFIKSASCSSNFCFEPLDENTLYKIKTVDGVEAVSTFRAMPGTF 559
Query: 130 QNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSY 189
+ + I ++ +++ +S KI GD + + +
Sbjct: 560 KGKEILLGFGEEKVVKKYHNGIDNFEVTKSVAVSEYFKIRYGLKVGDFIEIDTPKGKEKF 619
Query: 190 TVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILG 249
+ +F + + Q + E + + +++K + + ++
Sbjct: 620 KIREIFTS---YSNVNGFIIFDNSFQKRYWDELKFTQVSIYLKKGVDADSVISKLESLIN 676
Query: 250 NG 251
Sbjct: 677 QD 678
>gi|86141785|ref|ZP_01060309.1| putative FtsX-related transmembrane transport protein
[Leeuwenhoekiella blandensis MED217]
gi|85831348|gb|EAQ49804.1| putative FtsX-related transmembrane transport protein
[Leeuwenhoekiella blandensis MED217]
Length = 795
Score = 35.9 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 26/53 (49%), Gaps = 10/53 (18%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGV-MALIVVMSVMNGFR 54
+ + +A+R L+ ++ S ++ G+ +G+ A ++++ V GF
Sbjct: 1 MLKNY-FKIAFRNLWRHKG------FSILNIGGLAVGMAAAFLIMLYV--GFE 44
>gi|116625051|ref|YP_827207.1| hypothetical protein Acid_5981 [Candidatus Solibacter usitatus
Ellin6076]
gi|116228213|gb|ABJ86922.1| protein of unknown function DUF214 [Candidatus Solibacter usitatus
Ellin6076]
Length = 415
Score = 35.9 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 21/208 (10%), Positives = 52/208 (25%), Gaps = 13/208 (6%)
Query: 26 SIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIAN 85
S ++ +G++IG+ ++ V S++ G RE ++ + + K +
Sbjct: 20 RFRSLLTVLGIVIGITTVVTVASLLTGLREGVVTFFRELGPDNIFVYKTSGDPSQE---- 75
Query: 86 RLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFD 145
P + + + S V + ++
Sbjct: 76 -----PPKERKRRPMKPEYADLIRRWTTSVDDVGLQLYIPPVVDGKPITAHVPGFESENI 130
Query: 146 RGKGVIIGKDLARNLGISIGDKINILSPYGDVT--PMGMGIRSKSYTVLGMFRMRFPDYD 203
G + S G + +G + Y F
Sbjct: 131 NVAGQSPNMGEIQPRDFSAGRYFTPEEDQRNAHVAVIGANVADSLYPGGNPIGSTFMMDG 190
Query: 204 NGMVYMSLQEAQL--YFNLENAVSGIEV 229
+ + + +F + I +
Sbjct: 191 AEYSVIGVYDKAKGGFFGENGQDNAIVI 218
>gi|22537163|ref|NP_688014.1| permease, putative [Streptococcus agalactiae 2603V/R]
gi|76787604|ref|YP_329719.1| ABC transporter, permease protein, putative [Streptococcus
agalactiae A909]
gi|77414031|ref|ZP_00790202.1| putative permease [Streptococcus agalactiae 515]
gi|22534026|gb|AAM99886.1|AE014237_20 permease, putative [Streptococcus agalactiae 2603V/R]
gi|76562661|gb|ABA45245.1| ABC transporter, permease protein, putative [Streptococcus
agalactiae A909]
gi|77159913|gb|EAO71053.1| putative permease [Streptococcus agalactiae 515]
Length = 876
Score = 35.9 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 31/249 (12%), Positives = 74/249 (29%), Gaps = 22/249 (8%)
Query: 3 IFSRFEV--IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
I+ + V R +F ++ ++ GV V L + + + ++ + +
Sbjct: 495 IWKKLSFTQKVTARNIFRYKQRM------IMTIFGVAGSVALLFSGLGIQSSLKQTVNEH 548
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
I + ++ + + L I + + + + +
Sbjct: 549 FGRIMPYDILLTYNTNASPPKILE--LLSKDSKIDKYQPIHLENLDESIPGQINKQSISL 606
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
L + + + KG+II K LA+ ++ GD I++ +
Sbjct: 607 FITDKKQLLPFIYLQEATTNKSLHLNNKGIIISKKLAQFYHVNTGDFIHLSHSQTLPSRK 666
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ V ++M+ Q + F E + V +
Sbjct: 667 LKITGVVNANVGH------------YIFMTKQYYRTIFKKEAKDNAFLVKLTKHKIANNL 714
Query: 241 HENIVRILG 249
E ++ I G
Sbjct: 715 AEKLLEING 723
>gi|120435072|ref|YP_860758.1| FtsX family membrane protein [Gramella forsetii KT0803]
gi|117577222|emb|CAL65691.1| FtsX family membrane protein (predicted permease) [Gramella
forsetii KT0803]
Length = 805
Score = 35.9 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 29/79 (36%), Gaps = 8/79 (10%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + + +AWR L+ + F+++ + V G L +S+ + F K
Sbjct: 1 MFRNY-LKIAWRSLWKEKTFTFLNVFG----LSVAFGAAIL---LSIYSLFELSFNKFHE 52
Query: 63 GINGHVVIQQKYYPLVDYQ 81
+ + Y +
Sbjct: 53 HGDNIFQVYHTEYTPKGPE 71
>gi|328474669|gb|EGF45474.1| hypothetical protein VP10329_18240 [Vibrio parahaemolyticus 10329]
Length = 404
Score = 35.5 bits (79), Expect = 7.1, Method: Composition-based stats.
Identities = 21/228 (9%), Positives = 62/228 (27%), Gaps = 6/228 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQ----FIA 84
S ++ I + GV++++V++++ GF + + +V + +Q
Sbjct: 19 SVLAIIAIAWGVISVVVLIALGEGFYRHQTQSFSFMINNVQVVFPSSTSKPWQGLASRRQ 78
Query: 85 NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDF 144
+ + QA + ++G + S ++
Sbjct: 79 IDIPQEKVDMIKQSGFVQQASSVYAKWDANITNLKGQNLSSTVSGIDTSYFPLIQRKLQS 138
Query: 145 DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDN 204
+ + + GI + D+
Sbjct: 139 GSRNLSPSDMKNHTRVAVLGDQIAQMGGIQIGDRLKVNGIPFLVIGITVGEDTGISFGDS 198
Query: 205 GMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGV 252
V++ + ++ + + + + +D +NIV +
Sbjct: 199 RTVFIPQTTYRDLWDAKPWM--VLMKPRDGMDAPSFRQNIVNFFAKQL 244
>gi|170739833|ref|YP_001768488.1| hypothetical protein M446_1553 [Methylobacterium sp. 4-46]
gi|168194107|gb|ACA16054.1| protein of unknown function DUF214 [Methylobacterium sp. 4-46]
Length = 376
Score = 35.5 bits (79), Expect = 7.1, Method: Composition-based stats.
Identities = 34/262 (12%), Positives = 75/262 (28%), Gaps = 30/262 (11%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ +A R LF +R + G++ V+ ++V M + GF R++ +
Sbjct: 1 MPLVLTLALRNLFQDRLRFA------AAVTGIVFSVVLILVQMGLFYGF-----GRMVTL 49
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
+ Q+ + D+ + L + G A + +G S +
Sbjct: 50 IVDHTSADIWIMSKGTQYFEDLSILDSDMREELRALDGVADAIPVVAGFSAWIPPEGGLV 109
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ + I+ L + V+ G
Sbjct: 110 GIFVIAS---------DPASGLAPWNIVEGGLDDLAAPGTVTLERSYAAELGVSARGEAA 160
Query: 185 RSKSYTVLGMFRMRFPDYDNG--MVYMSLQEAQLYFNLE-NAVSGIEVFVKDPDAIEKTH 241
+ + + V V+ + A+ Y L N V+ V +K +E+
Sbjct: 161 QVRGHPVTVGPVTSGLRSFTTRPYVFADFRNARSYVGLPANLVTYFLVRMKPGADLERLR 220
Query: 242 EN-------IVRILGNGVVVID 256
++ I + +
Sbjct: 221 QDALSRISGIEALTPDQFRARS 242
>gi|146298237|ref|YP_001192828.1| hypothetical protein Fjoh_0473 [Flavobacterium johnsoniae UW101]
gi|146152655|gb|ABQ03509.1| protein of unknown function DUF214 [Flavobacterium johnsoniae
UW101]
Length = 807
Score = 35.5 bits (79), Expect = 7.1, Method: Composition-based stats.
Identities = 28/235 (11%), Positives = 76/235 (32%), Gaps = 10/235 (4%)
Query: 27 IASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANR 86
+ S ++ +G+ IG+ LI + N N + V+ Q +
Sbjct: 18 LFSTLNILGLSIGIAGLIFALLYWNDEHSYNKWNPEKDNVYQVLVQLSDMPAVAENSVRL 77
Query: 87 LDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDR 146
++ + V V + + + + +++ F + +
Sbjct: 78 KAYLENDPNVENIVYA---DNWYKKDKITYKGKKETVNKIINVESDFFSIFPFKIIHGNA 134
Query: 147 GKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGM 206
+ G +A + IS N + + ++ + P+
Sbjct: 135 ASALKDGSSIAISEDISKRVFGNENPIGKQINCLSAMFTVRAVYRVPDNSSIMPNVVVNN 194
Query: 207 V--YMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVIDWQQ 259
+ + + + + F L+ I + +KDP I+ T + ++ + ++V ++
Sbjct: 195 MKDLVDINKNRGLFVLK-----ILLKIKDPSKIDVTKRMLEKVYYDEIIVKSSKE 244
>gi|52140310|ref|YP_086520.1| ABC transporter, permease [Bacillus cereus E33L]
gi|196039418|ref|ZP_03106723.1| ABC transporter, permease [Bacillus cereus NVH0597-99]
gi|206976912|ref|ZP_03237814.1| ABC transporter, permease [Bacillus cereus H3081.97]
gi|217962739|ref|YP_002341315.1| ABC transporter, permease [Bacillus cereus AH187]
gi|218906431|ref|YP_002454265.1| ABC transporter, permease [Bacillus cereus AH820]
gi|222098714|ref|YP_002532772.1| ABC transporter , permease [Bacillus cereus Q1]
gi|51973779|gb|AAU15329.1| ABC transporter, permease [Bacillus cereus E33L]
gi|196029578|gb|EDX68180.1| ABC transporter, permease [Bacillus cereus NVH0597-99]
gi|206744878|gb|EDZ56283.1| ABC transporter, permease [Bacillus cereus H3081.97]
gi|217065613|gb|ACJ79863.1| ABC transporter, permease [Bacillus cereus AH187]
gi|218535729|gb|ACK88127.1| ABC transporter, permease [Bacillus cereus AH820]
gi|221242773|gb|ACM15483.1| ABC transporter, permease [Bacillus cereus Q1]
Length = 400
Score = 35.5 bits (79), Expect = 7.1, Method: Composition-based stats.
Identities = 34/247 (13%), Positives = 91/247 (36%), Gaps = 11/247 (4%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A + +++ S ++ +G++IGV ++I V+++ G + + G G+
Sbjct: 6 SIKIALSSILAHKLR------SALTMLGIIIGVGSIITVVAIGQGGEAMLKSKFAGSGGN 59
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
++ ++ P ++ +F + + + V VS + + V +++ +
Sbjct: 60 NLMPIQFQPDINDEFAMGGFEMPKLTEEDILEVKQVKDVSHVITTNRNSEVLDVNDKKAN 119
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK 187
Y V+ + D+ + + + + DV P+G I K
Sbjct: 120 LNVIGLDNEYFAVNKVKVVKGRTLSESDITHANNVVMISTKTEETLFKDVNPVGQIIEMK 179
Query: 188 ----SYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHEN 243
+ F ++ + L + + + + I + K+ D +E +
Sbjct: 180 GQPMQIVGVYTSDNEFMGFEMEEALIPLTLWPVLYGT-DEIQNIAIQAKNVDDLEAAGKQ 238
Query: 244 IVRILGN 250
V +L +
Sbjct: 239 AVDVLNS 245
>gi|313158131|gb|EFR57536.1| efflux ABC transporter, permease protein [Alistipes sp. HGB5]
Length = 419
Score = 35.5 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 31/236 (13%), Positives = 65/236 (27%), Gaps = 13/236 (5%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M F W+ + NRK S ++ +GV G+ LIV++ G +
Sbjct: 1 MRFFDTDRWNEIWQTISRNRKR------SIMTALGVFWGIFMLIVLLGAGMGLGRLFRAQ 54
Query: 61 VLGINGHVVIQQKYYPLVDYQFI---ANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVL 117
+ G++ + V+ Q V Y+ + D+ V + +
Sbjct: 55 LGGMSTNTVLLQSSRTSVPYKGMPTGRWWRMDNDDLEAVSKLEEVEYTSGVIWGNELHCS 114
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILS----P 173
+ + R + + I + ++ P
Sbjct: 115 YKERKGDYQMMGYTPDYQKINPQKIIAGRYINEVDMVHKRKVCVIGTQVQKDLFPGEPDP 174
Query: 174 YGDVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEV 229
G V +G + + V + + AQ F + + +
Sbjct: 175 TGKVIKVGGSYFTIIGVMRRESSAMSFSDVERTVVVPISLAQQMFGYGRTIHLLAL 230
>gi|313677515|ref|YP_004055511.1| hypothetical protein Ftrac_3429 [Marivirga tractuosa DSM 4126]
gi|312944213|gb|ADR23403.1| protein of unknown function DUF214 [Marivirga tractuosa DSM 4126]
Length = 800
Score = 35.5 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 14/101 (13%), Positives = 34/101 (33%), Gaps = 10/101 (9%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMN---GFREDMIK 59
+ + + +A R + + +FI + G+ IG+ A VV ++++ F
Sbjct: 1 MLKNY-LKIALRNIKRHSLRSFIHVI------GLSIGIAACFVVYNLVSYEYSFDTHQKD 53
Query: 60 RVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFV 100
R V + ++ + + + V
Sbjct: 54 RDRIYRITSVTSNGEEEWPNPGSPIPLVEAVRNEMSAAQEV 94
>gi|260901555|ref|ZP_05909950.1| antimicrobial peptide ABC transporter, permease protein [Vibrio
parahaemolyticus AQ4037]
gi|308110902|gb|EFO48442.1| antimicrobial peptide ABC transporter, permease protein [Vibrio
parahaemolyticus AQ4037]
Length = 404
Score = 35.5 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 22/228 (9%), Positives = 63/228 (27%), Gaps = 6/228 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQ----FIA 84
S ++ I + GV++++V++++ GF + + +V + +Q
Sbjct: 19 SVLAIIAIAWGVISVVVLIALGEGFYRHQTQSFSFMINNVQVVFPSSTSKPWQGLPSRRQ 78
Query: 85 NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDF 144
+ + QA + ++G + S ++
Sbjct: 79 IDIPQEKVDMIKQSGFVQQASSVYAKWDANITNLKGQNLSSTVSGIDTSYFPLMQRKLQS 138
Query: 145 DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDN 204
D + + + GI + D+
Sbjct: 139 GSRNLSPSDMDNHTRVAVLGDQIAQMGGIQIGDRLKVNGIPFLVIGITVGEDTGISFGDS 198
Query: 205 GMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGV 252
V++ + ++ + + + + +D +NIV +
Sbjct: 199 RTVFIPQTTYRDLWDAKPWM--VLMKPRDGMDAPSFRQNIVNFFAKQL 244
>gi|226325638|ref|ZP_03801156.1| hypothetical protein COPCOM_03451 [Coprococcus comes ATCC 27758]
gi|225205762|gb|EEG88116.1| hypothetical protein COPCOM_03451 [Coprococcus comes ATCC 27758]
Length = 820
Score = 35.5 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 37/273 (13%), Positives = 85/273 (31%), Gaps = 25/273 (9%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFRED------------MI 58
+ R L N+K S + +S I VM + V+S N ++
Sbjct: 423 LTKRNLAENKKK---STITIVSMAVTGIFVMMVATVLSCANPMESAKSSIVGQYEISPIV 479
Query: 59 KRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
+ + + + + +++ + V +V F + + +
Sbjct: 480 ESGNKEHPEYEWAEVQKNNPLNEGLKQQIEELDGVERVDVFTALKVSGGPFEEKIGTEFI 539
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVT 178
G+ L+ + K ++ L I +GDK+ +
Sbjct: 540 NGVPEEYAEELKKGITEGNVTYEELKSGDKVILDSALLHWYPDIKVGDKLKL------NI 593
Query: 179 PMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIE 238
G K V + + + M+ + A+ + N+ S +V + D D E
Sbjct: 594 HDGDNTFQKEIEVAAIGEYGRGLTNYNCLIMAKEGAEKLT-INNSSSYFQV-IADKDYDE 651
Query: 239 KTHENIVRILGNG--VVVIDWQQRYQIFFSCYE 269
++ I+ + + W+ Y + + +
Sbjct: 652 ALEASLQAIVDGSGRLQMRTWKNEYDTWENAMQ 684
>gi|91218180|ref|ZP_01255128.1| putative ABC transporter permease [Psychroflexus torquis ATCC
700755]
gi|91183638|gb|EAS70033.1| putative ABC transporter permease [Psychroflexus torquis ATCC
700755]
Length = 799
Score = 35.5 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 42/123 (34%), Gaps = 15/123 (12%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+F + +A+R L N+ +FI+I+ G+ IG+ A I++ I L
Sbjct: 1 MFKNY-FKIAFRNLIKNKVYSFINIS------GLAIGMAATILI--------GLWIADEL 45
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGIS 122
N H + + Q + P + + L F + + + +
Sbjct: 46 NFNNHYKNKDSIAQIYQSQTTNGNISTGPSIPRPLEFALRENYKANFKHIVMASWEQSQY 105
Query: 123 NSD 125
Sbjct: 106 LKF 108
>gi|254229643|ref|ZP_04923054.1| efflux ABC transporter, permease protein [Vibrio sp. Ex25]
gi|151937842|gb|EDN56689.1| efflux ABC transporter, permease protein [Vibrio sp. Ex25]
Length = 404
Score = 35.5 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 21/228 (9%), Positives = 62/228 (27%), Gaps = 6/228 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQ----FIA 84
S ++ I + GV++++V++++ GF + + +V + +Q
Sbjct: 19 SVLAIIAIAWGVISVVVLIALGEGFYRHQTQSFSFMVNNVQVVFPSSTSKPWQGLASRRQ 78
Query: 85 NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDF 144
+ + QA + ++G + S ++
Sbjct: 79 IDIPQEKVDMIKQSGFVQQASSVYAKWDANITNLKGQNLSSTVSGIDTSYFPLIQRKLQS 138
Query: 145 DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDN 204
+ + + GI + D+
Sbjct: 139 GSRNLSPSDMKNHTRVAVLGDQIAQMGGIQIGDRLKVNGIPFLVIGITVGEDTGISFGDS 198
Query: 205 GMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGV 252
V++ + ++ + + + + +D +NIV +
Sbjct: 199 RTVFIPQTTYRDLWDAKPWM--VLMKPRDGMDAPSFRQNIVNFFAKQL 244
>gi|255281903|ref|ZP_05346458.1| ABC transporter ATP-binding protein [Bryantella formatexigens DSM
14469]
gi|255267576|gb|EET60781.1| ABC transporter ATP-binding protein [Bryantella formatexigens DSM
14469]
Length = 1016
Score = 35.5 bits (79), Expect = 7.5, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFI-SIASFISFIGVMIGVMA 42
MS+ + F + + + LF+ + + S A I IG+ +
Sbjct: 255 MSMGTAFSL--SLKNLFTKKGRTMLTSFAGSIGIIGIALIYAV 295
>gi|255007526|ref|ZP_05279652.1| putative ABC transporter, permease protein [Bacteroides fragilis
3_1_12]
Length = 413
Score = 35.5 bits (79), Expect = 7.5, Method: Composition-based stats.
Identities = 25/257 (9%), Positives = 70/257 (27%), Gaps = 15/257 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +E+ ++ R N+ F +S G+ G++ L+V++ GF+ ++
Sbjct: 1 MEVLYEIYLSIR---QNKIRTF------LSGFGISWGILILVVLLGTGKGFQNSVMDIFS 51
Query: 63 GINGHVVIQ------QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
+ KY + + + + L F+ V K P + + S
Sbjct: 52 IFAQKSMYVYGGTTSMKYKNIREGEQLHFDLHFLNRVKKQFPGIKAISPEITGSYSQVMN 111
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
+ +N ++ D + +
Sbjct: 112 KAKSGLFKIIGINENYMGIKILKINEDGRYFNKGDDENTRNVAIIGENVSTTLFNNQKAL 171
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
+ + + F + VY+ + + + +++
Sbjct: 172 GKSINIAGIDFKVIGVLKNDDIFSASEINSVYVPFSSYINCIDNKTPLRAFCLYLNKEVD 231
Query: 237 IEKTHENIVRILGNGVV 253
++ + + N
Sbjct: 232 SKRFENELRAFIANKYQ 248
>gi|256425039|ref|YP_003125692.1| hypothetical protein Cpin_6082 [Chitinophaga pinensis DSM 2588]
gi|256039947|gb|ACU63491.1| protein of unknown function DUF214 [Chitinophaga pinensis DSM
2588]
Length = 802
Score = 35.5 bits (79), Expect = 7.6, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMA-LIVVMSVMNGFREDMIKRV 61
+F + +A R L+ N+ S I+ +G+ IG+ L++ + V++ R D +
Sbjct: 1 MFKYY-YKIATRNLWRNKG------FSAITIMGLAIGLATCLLIALFVIDEMRYDAYNKD 53
>gi|164688485|ref|ZP_02212513.1| hypothetical protein CLOBAR_02130 [Clostridium bartlettii DSM
16795]
gi|164602898|gb|EDQ96363.1| hypothetical protein CLOBAR_02130 [Clostridium bartlettii DSM
16795]
Length = 793
Score = 35.5 bits (79), Expect = 7.6, Method: Composition-based stats.
Identities = 24/267 (8%), Positives = 73/267 (27%), Gaps = 22/267 (8%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISI-ASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+ + +A R + + + F + S I +G+ + V L GF + +
Sbjct: 241 MKISMAIKLAIRDISNKKLRMFFYVLISSIGIMGIALIVALL-------QGFNKQISGYE 293
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ I + K + ++ +
Sbjct: 294 NDTLANYPIVINKVYTNYS------IHNTSQNSKQNQNDLKNSKLNTKNDIIYSYNSSQN 347
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMG 181
S + + + + + D ++ G + + +++
Sbjct: 348 STEHINQVNKDYIDYIKQMDKDLVSEISYESQINMNILREDEDGKVSILDTSTINLSSYP 407
Query: 182 MGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAI---E 238
++Y + N + + + + + N ++ + + VK I +
Sbjct: 408 KDYGQETYLEKNYELLYGYYPTNKNEVVLIVDEKNRLDT-NILNALGIDVKKNKEIKFDD 466
Query: 239 KTHENIVRILGNGVVVIDWQQRYQIFF 265
+ IL + +++ F+
Sbjct: 467 LIGKEYKIILNDEFY----KKQNGHFY 489
>gi|77409889|ref|ZP_00786511.1| ABC transporter, ATP-binding protein [Streptococcus agalactiae
COH1]
gi|77171501|gb|EAO74748.1| ABC transporter, ATP-binding protein [Streptococcus agalactiae
COH1]
Length = 56
Score = 35.5 bits (79), Expect = 7.6, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 29/53 (54%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQ 81
+F++ +G++IGV +++++M++ G ++ + + ++ I K +
Sbjct: 3 AFLTMLGIIIGVASVVLIMALGKGMKDSVTNEITKSQKNLQIYYKTKEDQKNE 55
>gi|313145220|ref|ZP_07807413.1| ABC transporter [Bacteroides fragilis 3_1_12]
gi|313133987|gb|EFR51347.1| ABC transporter [Bacteroides fragilis 3_1_12]
Length = 424
Score = 35.5 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 25/257 (9%), Positives = 70/257 (27%), Gaps = 15/257 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ +E+ ++ R N+ F +S G+ G++ L+V++ GF+ ++
Sbjct: 12 MEVLYEIYLSIR---QNKIRTF------LSGFGISWGILILVVLLGTGKGFQNSVMDIFS 62
Query: 63 GINGHVVIQ------QKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGV 116
+ KY + + + + L F+ V K P + + S
Sbjct: 63 IFAQKSMYVYGGTTSMKYKNIREGEQLHFDLHFLNRVKKQFPGIKAISPEITGSYSQVMN 122
Query: 117 LVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGD 176
+ +N ++ D + +
Sbjct: 123 KAKSGLFKIIGINENYMGIKILKINEDGRYFNKGDDENTRNVAIIGENVSTTLFNNQKAL 182
Query: 177 VTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDA 236
+ + + F + VY+ + + + +++
Sbjct: 183 GKSINIAGIDFKVIGVLKNDDIFSASEINSVYVPFSSYINCIDNKTPLRAFCLYLNKEVD 242
Query: 237 IEKTHENIVRILGNGVV 253
++ + + N
Sbjct: 243 SKRFENELRAFIANKYQ 259
>gi|260175134|ref|ZP_05761546.1| putative ABC transporter, ATP-binding protein [Bacteroides sp. D2]
Length = 409
Score = 35.5 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 28/235 (11%), Positives = 62/235 (26%), Gaps = 8/235 (3%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIK----RVLGINGHVVIQQKYYPLVDYQFIA 84
S ++ GV G+ L+ ++ G + M K V + +
Sbjct: 18 SLLTAFGVFWGIFMLVALIGGGQGLEDMMKKNFEGFATNSGFLVSQRTGEAYKGFRKGRW 77
Query: 85 NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDF 144
L+ + ++ GS + + +
Sbjct: 78 WNLESTDIDRLRSQVKEVEIITPSVARWGSKAVYEDKKYDCSVKGLYPDYLHIESQEMAY 137
Query: 145 DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDN 204
R + K+ + I ++ P D + + Y V+GM
Sbjct: 138 GRFINEVDIKEARKVCVIGKRIYESLFKPGEDPCGKYVRVDGIYYQVIGMSSSEGDMNIQ 197
Query: 205 GM----VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVI 255
G V + Q +NL + I K + + + +++ +
Sbjct: 198 GRASEAVTLPFTTMQQTYNLGGRIDVICFTAKHGVKVSEIQPKMEQVIKTAHYIS 252
>gi|323474791|gb|ADX85397.1| permease protein, FtsX superfamily [Sulfolobus islandicus REY15A]
gi|323477534|gb|ADX82772.1| conserved hypothetical protein [Sulfolobus islandicus HVE10/4]
Length = 421
Score = 35.5 bits (79), Expect = 7.8, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 40/92 (43%), Gaps = 6/92 (6%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHV 68
+A++ L S + S ++ I VMIGV+++ V+++ G + ++ V + +
Sbjct: 8 FWLAYKGLVSRKA------ISILAIISVMIGVVSVTVLVAFTQGVSQSILSVVESLGSNT 61
Query: 69 VIQQKYYPLVDYQFIANRLDFIPDVIKVLPFV 100
++ Q + +P + V P +
Sbjct: 62 ILVLPRGGASLTQATVATIASLPVIKAVYPVI 93
>gi|262393819|ref|YP_003285673.1| ABC-type antimicrobial peptide transport system permease component
[Vibrio sp. Ex25]
gi|262337413|gb|ACY51208.1| ABC-type antimicrobial peptide transport system permease component
[Vibrio sp. Ex25]
Length = 400
Score = 35.5 bits (79), Expect = 7.8, Method: Composition-based stats.
Identities = 21/228 (9%), Positives = 62/228 (27%), Gaps = 6/228 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQ----FIA 84
S ++ I + GV++++V++++ GF + + +V + +Q
Sbjct: 15 SVLAIIAIAWGVISVVVLIALGEGFYRHQTQSFSFMVNNVQVVFPSSTSKPWQGLASRRQ 74
Query: 85 NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDF 144
+ + QA + ++G + S ++
Sbjct: 75 IDIPQEKVDMIKQSGFVQQASSVYAKWDANITNLKGQNLSSTVSGIDTSYFPLIQRKLQS 134
Query: 145 DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDN 204
+ + + GI + D+
Sbjct: 135 GSRNLSPSDMKNHTRVAVLGDQIAQMGGIQIGDRLKVNGIPFLVIGITVGEDTGISFGDS 194
Query: 205 GMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGV 252
V++ + ++ + + + + +D +NIV +
Sbjct: 195 RTVFIPQTTYRDLWDAKPWM--VLMKPRDGMDAPSFRQNIVNFFAKQL 240
>gi|224369462|ref|YP_002603626.1| ABC-type transporter, permease protein [Desulfobacterium
autotrophicum HRM2]
gi|223692179|gb|ACN15462.1| ABC-type transporter, permease protein [Desulfobacterium
autotrophicum HRM2]
Length = 857
Score = 35.5 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 9/55 (16%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIK 59
F +A+R L+ N+ ++ + + +G + +V + NG + ++++
Sbjct: 461 RSFIRKIAFRNLYRNKWSSLSCFVT------IAMGSFLISMVPQIQNGLQTEIMR 509
>gi|209886812|ref|YP_002290669.1| putative transporter [Oligotropha carboxidovorans OM5]
gi|209875008|gb|ACI94804.1| putative transporter [Oligotropha carboxidovorans OM5]
Length = 349
Score = 35.5 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 37/125 (29%), Gaps = 7/125 (5%)
Query: 6 RFEVI-VAWRYLFSNRKNAFISI------ASFISFIGVMIGVMALIVVMSVMNGFREDMI 58
+ +A R+L + R A+ S+ + +G + V LI + G +
Sbjct: 225 SLALFVLALRHLGTARTGAYFSLAPFVGAILAVFMLGEPLSVKLLIAGCLMGLGLWLHLS 284
Query: 59 KRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
+R + H V++ ++ D P + V
Sbjct: 285 ERHEHEHTHDVLEHEHRHNHDEHHQHEHGPDAPPGEPHTHWHRHAPLVHRHPHYPDLHHR 344
Query: 119 RGISN 123
++
Sbjct: 345 HDHTH 349
>gi|3150433|gb|AAC16969.1| serotonin receptor 5-HT2 [Lymnaea stagnalis]
Length = 885
Score = 35.5 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 38/128 (29%), Gaps = 1/128 (0%)
Query: 6 RFEVIVAWRY-LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
E + RY L++ K+ I + + + + + + I V+ ++ +
Sbjct: 374 SLERYIGIRYPLWTKNKSKRIVLLKIVLVWTIALAITSPITVLGIVKADNVLFQGACVLN 433
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
N H +I I + + + Q+ + G + +
Sbjct: 434 NEHFIIYGSICAFFIPLAIMVLMYALTVKMLNTQARLCQSRGAEDGEGQPMIRRSTSRRN 493
Query: 125 DFSYLQNS 132
+ Q
Sbjct: 494 WQTRRQFY 501
>gi|300853955|ref|YP_003778939.1| putative ABC transporter permease [Clostridium ljungdahlii DSM
13528]
gi|300434070|gb|ADK13837.1| predicted ABC type transporter, permease component [Clostridium
ljungdahlii DSM 13528]
Length = 848
Score = 35.5 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 28/53 (52%)
Query: 4 FSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFRED 56
F E ++A++ + N+K +++ S + + + I + I +M++ G + +
Sbjct: 396 FLNIESLMAFKNIKRNKKKFRVTVFSMVISMALFIFFSSFINMMTIFTGSQSE 448
>gi|284035850|ref|YP_003385780.1| hypothetical protein Slin_0929 [Spirosoma linguale DSM 74]
gi|283815143|gb|ADB36981.1| protein of unknown function DUF214 [Spirosoma linguale DSM 74]
Length = 791
Score = 35.5 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALI 44
+ + + +AWR L S + +FI+ I+ + V + V LI
Sbjct: 1 MLRNY-LKIAWRNLVSQKGYSFIN----ITGLAVGMAVAMLI 37
>gi|311746440|ref|ZP_07720225.1| putative ABC transporter, permease protein [Algoriphagus sp. PR1]
gi|126575333|gb|EAZ79665.1| putative ABC transporter, permease protein [Algoriphagus sp. PR1]
Length = 808
Score = 35.5 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 9/44 (20%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVV 46
+ + +A+R L + +FI+I +G+ + LI +
Sbjct: 1 MLKNY-FKIAYRNLLKKKVYSFINIVG----LGIGMACCVLIFM 39
>gi|319744998|gb|EFV97326.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Streptococcus agalactiae ATCC 13813]
Length = 876
Score = 35.5 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 30/249 (12%), Positives = 73/249 (29%), Gaps = 22/249 (8%)
Query: 3 IFSRFEV--IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
I+ + V R +F ++ ++ GV V L + + + ++ + +
Sbjct: 495 IWKKLSFTQKVTARNIFRYKQRM------IMTIFGVAGSVALLFSGLGIQSSLKQTVNEH 548
Query: 61 VLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRG 120
I + ++ + + L + + + + +
Sbjct: 549 FGRIMPYDILLTYNTNASPQKILK--LLSKDSKTDKYQPIHLENLDESIPGQINKQSISL 606
Query: 121 ISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPM 180
L + + + KG+II K LA+ ++ GD I++ +
Sbjct: 607 FITDKKQLLPFIYLQEATTSKSLHLNNKGIIISKKLAQFYHVNTGDFIHLSHSQTLPSRK 666
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKT 240
+ V ++M+ Q + F E + V +
Sbjct: 667 LKIAGVVNANVGH------------YIFMTKQYYRTIFKKEAKDNAFLVKLTKHKIANNL 714
Query: 241 HENIVRILG 249
E ++ I G
Sbjct: 715 AEKLLEING 723
>gi|332179069|gb|AEE14758.1| protein of unknown function DUF214 [Thermodesulfobium narugense
DSM 14796]
Length = 406
Score = 35.5 bits (79), Expect = 8.2, Method: Composition-based stats.
Identities = 11/65 (16%), Positives = 33/65 (50%), Gaps = 10/65 (15%)
Query: 9 VIV----AWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ A R + ++ S ++ +G +IG+ A +++ S+ +G +E I+++ +
Sbjct: 4 FFINFSQALRSISRRKRK------SILAILGFLIGISATVIIASISSGVKEKTIEQIKSM 57
Query: 65 NGHVV 69
+++
Sbjct: 58 GSNMI 62
>gi|307266552|ref|ZP_07548084.1| protein of unknown function DUF214 [Thermoanaerobacter wiegelii
Rt8.B1]
gi|306918406|gb|EFN48648.1| protein of unknown function DUF214 [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 402
Score = 35.5 bits (79), Expect = 8.2, Method: Composition-based stats.
Identities = 35/256 (13%), Positives = 88/256 (34%), Gaps = 15/256 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
++ V VA + SN+ AF ++ +G++IG+ ++I ++S+ G ++ ++
Sbjct: 1 MYIWEAVKVAIDSILSNKLRAF------LTMLGIIIGIASVITIVSLGTGGQKAILGEFE 54
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSG-----QAFVSGLSSGGSGVL 117
I +V + + + + + K L V + + +
Sbjct: 55 KIGVNVFSIKTRNDVEIRDSDRLAIRDVEMIRKRLSSVKYAAPIAEKMGLAKTDKVTKRA 114
Query: 118 VRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDV 177
+ ++ D+ + N + ++ +I D + + S
Sbjct: 115 LFIATDFDYGNVSNLKVIYGRFLNEKDILLGRNVILIDKDSAKELFGYEDCVGKSIKIGS 174
Query: 178 TPMGMGIRSKSYTVLGMFRM---RFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDP 234
+ G + D + + + AQ F N +S I V +
Sbjct: 175 YSSFDTAKIIGVIDSGNLKSLGGSIADQIPVIAAIPITYAQKIFPDVN-ISQIYVMTYNQ 233
Query: 235 DAIEKTHENIVRILGN 250
+ +++T VR++ +
Sbjct: 234 NQLDETSSQAVRLIES 249
>gi|86131554|ref|ZP_01050152.1| ABC transporter, permease protein [Dokdonia donghaensis MED134]
gi|85817999|gb|EAQ39167.1| ABC transporter, permease protein [Dokdonia donghaensis MED134]
Length = 420
Score = 35.5 bits (79), Expect = 8.2, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 29/66 (43%), Gaps = 6/66 (9%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
A L +N+ F+S+ GV +G+ ++I V++ ++ ++ + ++
Sbjct: 11 SFRFAVNALRNNKTRTFLSLM------GVTVGIFSIIGVLAAVDSLEREIKGSLSALDQS 64
Query: 68 VVIQQK 73
+I
Sbjct: 65 TIILCH 70
>gi|284035868|ref|YP_003385798.1| hypothetical protein Slin_0948 [Spirosoma linguale DSM 74]
gi|283815161|gb|ADB36999.1| protein of unknown function DUF214 [Spirosoma linguale DSM 74]
Length = 797
Score = 35.5 bits (79), Expect = 8.3, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 25/46 (54%), Gaps = 8/46 (17%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGV-MALIVVM 47
+F + + +A R L N+ + I+I G+ IG+ A+++++
Sbjct: 1 MFQNY-LKIALRNLARNKAYSAINII------GLSIGLSAAMLIML 39
>gi|315923368|ref|ZP_07919608.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313697243|gb|EFS34078.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 413
Score = 35.5 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 28/235 (11%), Positives = 62/235 (26%), Gaps = 8/235 (3%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIK----RVLGINGHVVIQQKYYPLVDYQFIA 84
S ++ GV G+ L+ ++ G + M K V + +
Sbjct: 22 SLLTAFGVFWGIFMLVALIGGGQGLEDMMKKNFEGFATNSGFLVSQRTGEAYKGFRKGRW 81
Query: 85 NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDF 144
L+ + ++ GS + + +
Sbjct: 82 WNLESTDIDRLRSQVKEVEIITPSVARWGSKAVYEDKKYDCSVKGLYPDYLHIESQEMAY 141
Query: 145 DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDN 204
R + K+ + I ++ P D + + Y V+GM
Sbjct: 142 GRFINEVDIKEARKVCVIGKRIYESLFKPGEDPCGKYVRVDGIYYQVIGMSSSEGDMNIQ 201
Query: 205 GM----VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVI 255
G V + Q +NL + I K + + + +++ +
Sbjct: 202 GRASEAVTLPFTTMQQTYNLGGRIDVICFTAKHGVKVSEIQPKMEQVIKTAHYIS 256
>gi|288925188|ref|ZP_06419123.1| ABC transporter, putative permease [Prevotella buccae D17]
gi|315607369|ref|ZP_07882368.1| ABC superfamily ATP binding cassette transporter, permease protein
[Prevotella buccae ATCC 33574]
gi|288337953|gb|EFC76304.1| ABC transporter, putative permease [Prevotella buccae D17]
gi|315250926|gb|EFU30916.1| ABC superfamily ATP binding cassette transporter, permease protein
[Prevotella buccae ATCC 33574]
Length = 419
Score = 35.5 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 27/247 (10%), Positives = 62/247 (25%), Gaps = 10/247 (4%)
Query: 16 LFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV--LGINGHVVIQQK 73
++S K + + ++ V G+ LI ++ NG ++ N +V +
Sbjct: 8 IWSTAKRNKLR--TALTGFAVAWGIFMLIFLLGAGNGLINAQLQNTDRFMANSMMVGGGQ 65
Query: 74 YYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSF 133
D + +++ GQ + G + + S
Sbjct: 66 TAKAYDGLKEGRPIALNDRDLQITAHDFGQHVDEVGAQLHQGGMTVSYGENYISGTLYGV 125
Query: 134 SRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSK---SYT 190
++ I DL + + + + +G K
Sbjct: 126 YPNADEINKIEMLHGRFINQVDLQQTRKVLVVSDNQAKELFAGDLSRLVGCYVKVGDIAF 185
Query: 191 VLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVF---VKDPDAIEKTHENIVRI 247
+ Y + + +N + V IE ++ E +
Sbjct: 186 QVVGIYKNDQSGMGNEFYTAFTTLRTMYNRGDDVGNIEFTFHGLQTEQNNENFEKQYKAR 245
Query: 248 LGNGVVV 254
L
Sbjct: 246 LNKNHRA 252
>gi|256420001|ref|YP_003120654.1| hypothetical protein Cpin_0955 [Chitinophaga pinensis DSM 2588]
gi|256034909|gb|ACU58453.1| protein of unknown function DUF214 [Chitinophaga pinensis DSM 2588]
Length = 799
Score = 35.5 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 24/226 (10%), Positives = 64/226 (28%), Gaps = 12/226 (5%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGV-MALIVVMSVMNGFREDMIKRV 61
+ S + + +A R+L + +FI+I G+ IG+ +L++ + + + +
Sbjct: 1 MISTY-ITIALRHLAKRKLFSFINI------AGLAIGITFSLLITVYIWEEKQVNRDLNN 53
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLD---FIPDVIKVLPFVSGQAFVSGLSSGGSGVLV 118
L + K + L V + + + V
Sbjct: 54 LPQQYFMQSAWKADNMYMPLITPAMLAKGLHDQYPSLVADYYRTYPCSANATYKDRHFRV 113
Query: 119 RGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVII-GKDLARNLGISIGDKINILSPYGDV 177
+ YG+ ++ F V+I + + G + +
Sbjct: 114 GLQPGDTTIVSNFGLTMLYGDPAHAFRDNNSVVITEETAMKFFGKANALDEVLTIDTRQD 173
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENA 223
+ + + + ++M +Q + +
Sbjct: 174 GKKNYTVTGVLKSEARENSVTTINGFKNDIFMPMQSVDYFLGKDGD 219
>gi|313676704|ref|YP_004054700.1| hypothetical protein Ftrac_2614 [Marivirga tractuosa DSM 4126]
gi|312943402|gb|ADR22592.1| protein of unknown function DUF214 [Marivirga tractuosa DSM 4126]
Length = 424
Score = 35.5 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 39/239 (16%), Positives = 75/239 (31%), Gaps = 14/239 (5%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNG-FREDMIKRVLGINGHVVIQQKYYPLVDYQ------ 81
S + I V +GV + + + G F++ + + GHV I K Y Q
Sbjct: 16 SLLPIIIVALGVTLTVFLSGYLAGVFQDVIQQNARFETGHVKIMSKAYAQNKDQLPIDLA 75
Query: 82 -----FIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRF 136
+ + L ++ + + + G+ + S L +
Sbjct: 76 LLETEELKDELQAEYPDMQWVQRIKFGGLLDVPDDEGNSRSQGPAAVMAVSLLSENSMEL 135
Query: 137 YGNVSNDFDRGKGVIIGK--DLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGM 194
+ + L N + M + ++YT+ G
Sbjct: 136 DRLNIRNSIIKGNLPKENGEVLISNDFADKLEIEIGDQITYVGATMYGSMAFQNYTISGT 195
Query: 195 FRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVV 253
+ +D G V M + +AQ N+EN + I F + ++ ENIV+
Sbjct: 196 VKFGNIGFDRGAVIMDISDAQQILNMENGATEILGFFNNEQYQSESAENIVKKFNAQYE 254
>gi|283852217|ref|ZP_06369490.1| protein of unknown function DUF214 [Desulfovibrio sp. FW1012B]
gi|283572443|gb|EFC20430.1| protein of unknown function DUF214 [Desulfovibrio sp. FW1012B]
Length = 388
Score = 35.5 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 9/61 (14%), Positives = 23/61 (37%), Gaps = 6/61 (9%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ +WR L + R + + ++ G+ + V + + G R+ ++
Sbjct: 1 MPVPLAYSWRNLRTRR------LTTVLTAGGMALVVFVFTATLMLAEGLRQTLVATGSPG 54
Query: 65 N 65
N
Sbjct: 55 N 55
>gi|159041343|ref|YP_001540595.1| hypothetical protein Cmaq_0770 [Caldivirga maquilingensis IC-167]
gi|157920178|gb|ABW01605.1| protein of unknown function DUF214 [Caldivirga maquilingensis
IC-167]
Length = 425
Score = 35.5 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 30/247 (12%), Positives = 66/247 (26%), Gaps = 15/247 (6%)
Query: 9 VIVAWRYLFSNRKNA---FISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGIN 65
+ +AWR L+ R I I +G+ +G GF+ +
Sbjct: 10 LNLAWRALWERRGRTIGAIAGIVIAIIALGLAVG---------AGQGFKSLTTGFF--ES 58
Query: 66 GHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSD 125
V +P Q L + + V ++ G V+ + +
Sbjct: 59 VFGVNTIVLFPSGSAQLTLTDLATVSSLPHVSSVEPLLEASGSINVNGHPQRVQLVGVTV 118
Query: 126 FSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIR 185
+Q + + + + G +I +T G +
Sbjct: 119 DELMQMYGVTSLSDALISGNPILQTGVVLVGYDVAFTNTGQEIIYPGQLLTITVNGKTVT 178
Query: 186 SKSYTVLGMFRMRFPDYDNGM-VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ VL + + ++M + +SG+ + V P + +
Sbjct: 179 AIVGGVLKPGSVGLIGVNPNTAIFMDSSSFLSEIDPSGVLSGLTIHVDKPSNVNSVSSML 238
Query: 245 VRILGNG 251
+
Sbjct: 239 QSLYPQD 245
>gi|313672008|ref|YP_004050119.1| hypothetical protein Calni_0040 [Calditerrivibrio nitroreducens DSM
19672]
gi|312938764|gb|ADR17956.1| protein of unknown function DUF214 [Calditerrivibrio nitroreducens
DSM 19672]
Length = 837
Score = 35.5 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 35/249 (14%), Positives = 76/249 (30%), Gaps = 28/249 (11%)
Query: 7 FEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
I A R L + + SFIS GV +GV + +S++N + + I
Sbjct: 11 LIFIFAIRNLKEEK------LFSFISIFGVSLGVG---LFLSILNSTQSAIKSMTNDIER 61
Query: 67 HVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDF 126
I + ++ + F + ++ + + S
Sbjct: 62 LNPISNYEIVDKFGNPFDESVLERLNLKGIRNFPIIKINGQEENNKLTIPIYGVDSLKLL 121
Query: 127 SYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
+ R ++ F V + D+ + + + GD++ I + + + +
Sbjct: 122 KHSNIDLKRPDLDLLLFFQNTDAVFVTDDIGKRINLKKGDEVEINANGVKRFVVAGLLDA 181
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
Y + Q FN +S I+V + E + +
Sbjct: 182 DQIPSGF--------------YQDIGNFQEKFNYFGKISRIDVSLN-----ENLADEVKS 222
Query: 247 ILGNGVVVI 255
IL +++
Sbjct: 223 ILPENLILQ 231
>gi|313202577|ref|YP_004041234.1| hypothetical protein Palpr_0087 [Paludibacter propionicigenes WB4]
gi|312441893|gb|ADQ78249.1| protein of unknown function DUF214 [Paludibacter propionicigenes
WB4]
Length = 419
Score = 35.5 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 25/231 (10%), Positives = 64/231 (27%), Gaps = 7/231 (3%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQFIANRLD 88
+ ++ + V G+ LIV++ NG + ++ +Q
Sbjct: 21 TILTGLSVSWGIFILIVLLGAGNGLKNAVMSNFKDRAATNNVQIYSGTSSLPFMGLKSGR 80
Query: 89 FIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGK 148
+ + V + SG + +N++F + +
Sbjct: 81 SLTFDKSQVSTVKDNMLETSDQSGIIEKQMTITNNNEFGNFSINGVEPSYQKIFNLKFES 140
Query: 149 GVIIGKDLARNLGISI----GDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDN 204
+ N + KI + G + + + +
Sbjct: 141 NGGRFINQLDNKSSNKVVVLDKKIEDVLFKGTSALGKYVKIGSVMFKVIGINTKKARFGD 200
Query: 205 GMVYMSLQEAQLYFNLENAVSGIEVFVK---DPDAIEKTHENIVRILGNGV 252
G Y+ AQ FN + I + V ++ + ++ + + + +
Sbjct: 201 GQAYIPFSTAQYIFNPDLKFRNIAMTVNGLESKESNDDFNKRLKKTMSQSL 251
>gi|291165596|gb|EFE27645.1| ABC transporter, permease protein [Filifactor alocis ATCC 35896]
Length = 409
Score = 35.5 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 11/88 (12%), Positives = 36/88 (40%), Gaps = 6/88 (6%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVL 62
+ + ++A + NR +F ++ +G++IG+ ++I + ++ + + M K +
Sbjct: 1 MLIKESFLLALSAVRVNRMRSF------LTMLGIVIGIGSVIGITAIGDSIKSIMGKEID 54
Query: 63 GINGHVVIQQKYYPLVDYQFIANRLDFI 90
I + + + ++
Sbjct: 55 NIGTNQIFIALSWEKEEHGDDEYFTMDD 82
>gi|256544425|ref|ZP_05471798.1| possible component of ABC superfamily ATP binding cassette
transporter [Anaerococcus vaginalis ATCC 51170]
gi|256399750|gb|EEU13354.1| possible component of ABC superfamily ATP binding cassette
transporter [Anaerococcus vaginalis ATCC 51170]
Length = 442
Score = 35.5 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 28/60 (46%), Gaps = 8/60 (13%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
M I R + +A+R L + + ++ + V+IG +++I+++S+ +
Sbjct: 1 MKIKDRID--IAFRNLLRRKSR------TILTILSVLIGTVSIIMMISLSLAMAKQQRDM 52
>gi|301620679|ref|XP_002939694.1| PREDICTED: transmembrane 9 superfamily member 4 [Xenopus (Silurana)
tropicalis]
Length = 1025
Score = 35.1 bits (78), Expect = 9.0, Method: Composition-based stats.
Identities = 11/198 (5%), Positives = 45/198 (22%), Gaps = 2/198 (1%)
Query: 15 YLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKY 74
+++ + + + ++ + + G+ +V + GFR+ + N +
Sbjct: 817 FIWGKHSSGAVPFPTMVALLCMWFGISLPLVYLGYYFGFRKQPYDNPVRTNQIPRQIPEQ 876
Query: 75 YPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFS 134
+ +P + + + + +
Sbjct: 877 RWYMKRFVGILMAGILPFGAMFIELFFIFSAIWENQFYYLFGFLFLVFIILVVSCSQISI 936
Query: 135 RFYGNV--SNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVL 192
+ D+ + + + + + + ++
Sbjct: 937 VMVYFQLCAEDYRWWWRTFLVSGGSAFYVLIYAVFYFVNKLDIVEFIPSLLYFGYTTLMV 996
Query: 193 GMFRMRFPDYDNGMVYMS 210
F + YM
Sbjct: 997 LSFWLLTGTIGFYAAYMF 1014
>gi|225418661|ref|ZP_03761850.1| hypothetical protein CLOSTASPAR_05885 [Clostridium asparagiforme
DSM 15981]
gi|225041812|gb|EEG52058.1| hypothetical protein CLOSTASPAR_05885 [Clostridium asparagiforme
DSM 15981]
Length = 463
Score = 35.1 bits (78), Expect = 9.0, Method: Composition-based stats.
Identities = 10/59 (16%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRV 61
+ +I++ L + + ++ +GV+IG +++V++S+ G E ++++
Sbjct: 1 MRFPDLLIMSVNNLRRRKLR------TALTVLGVIIGTASIVVMVSLGIGLNELTMEQI 53
>gi|28898771|ref|NP_798376.1| hypothetical protein VP1997 [Vibrio parahaemolyticus RIMD 2210633]
gi|260877238|ref|ZP_05889593.1| antimicrobial peptide ABC transporter, permease protein [Vibrio
parahaemolyticus AN-5034]
gi|260897816|ref|ZP_05906312.1| ABC-type antimicrobial peptide transport system, permease protein
[Vibrio parahaemolyticus Peru-466]
gi|28806989|dbj|BAC60260.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|308087637|gb|EFO37332.1| ABC-type antimicrobial peptide transport system, permease protein
[Vibrio parahaemolyticus Peru-466]
gi|308090302|gb|EFO39997.1| antimicrobial peptide ABC transporter, permease protein [Vibrio
parahaemolyticus AN-5034]
Length = 404
Score = 35.1 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 21/228 (9%), Positives = 62/228 (27%), Gaps = 6/228 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQ----FIA 84
S ++ I + GV++++V++++ GF + + +V + +Q
Sbjct: 19 SVLAIIAIAWGVISVVVLIALGEGFYRHQTQSFSFMVNNVQVVFPSSTSKPWQGLASRRQ 78
Query: 85 NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDF 144
+ + QA + ++G + S ++
Sbjct: 79 IDIPQEKVDMIKQSGFVQQASSVYAKWDANITNLKGQNLSSTVSGIDTSYFPLIQRKLQS 138
Query: 145 DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDN 204
+ + + GI + D+
Sbjct: 139 GSRNLSPSDMKNHTRVAVLGDQIAQMGGIQIGDRLKVNGIPFLVIGITVGEDTGISFGDS 198
Query: 205 GMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGV 252
V++ + ++ + + + + +D +NIV +
Sbjct: 199 RTVFIPQTTYRDLWDAKPWM--VLMKPRDGMDAPSFRQNIVNFFAKQL 244
>gi|262301223|gb|ACY43204.1| transmembrane protein [Tomocerus sp. 'Tom2']
Length = 202
Score = 35.1 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 29/58 (50%)
Query: 9 VIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGING 66
+ L++N+ +A I ++ ++ + + +GV + + GFR+ +I+ + N
Sbjct: 100 FFIMNLILWANKSSAAIPFSTLVALLALWVGVSVPLTFVGAYFGFRKRVIEHPVRTNQ 157
>gi|86141789|ref|ZP_01060313.1| putative FtsX-related transmembrane transport protein
[Leeuwenhoekiella blandensis MED217]
gi|85831352|gb|EAQ49808.1| putative FtsX-related transmembrane transport protein
[Leeuwenhoekiella blandensis MED217]
Length = 814
Score = 35.1 bits (78), Expect = 9.1, Method: Composition-based stats.
Identities = 30/256 (11%), Positives = 71/256 (27%), Gaps = 20/256 (7%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGV-MALIVVMSVMNGFREDMIKRV 61
+ + + +AWR ++ N+ + I++ S IG+ + ++ + V F D
Sbjct: 1 MLKNY-IKIAWRNIWKNKLFSAINVISL------AIGLSASFVIGLMVYYDFSFDTFHED 53
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
VV + I ++ F + S +
Sbjct: 54 GDRIYRVVTDFETPQGNYKNGGVTPPMRIAAKEQLTGVEQSAYFYNWWISEAKAEANKQT 113
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKD----LARNLGISIGDKINILSPYGDV 177
+ S F K + + L R + + + + G
Sbjct: 114 FKDPERIILTEASYFDIFQYKWIAGSKATALQQPNSVVLTRKRAEAYFPNMPLAAVMGQS 173
Query: 178 TPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYM----SLQEAQLYFNLE----NAVSGIEV 229
I + ++ F R + N + + + + F + N S + +
Sbjct: 174 LVYDGTISATVSGIVEDFDKRTDLHFNEFISLETAKQTESSDQIFGDDWGNTNNASQLYI 233
Query: 230 FVKDPDAIEKTHENIV 245
+ E+ +
Sbjct: 234 KIAQQSTPEQIKTQLA 249
>gi|229186875|ref|ZP_04314030.1| hypothetical protein bcere0004_44160 [Bacillus cereus BGSC 6E1]
gi|228596612|gb|EEK54277.1| hypothetical protein bcere0004_44160 [Bacillus cereus BGSC 6E1]
Length = 314
Score = 35.1 bits (78), Expect = 9.3, Method: Composition-based stats.
Identities = 22/202 (10%), Positives = 59/202 (29%), Gaps = 7/202 (3%)
Query: 17 FSNRKNAFISI-ASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
+ RK F + S + V+IG LIV + +++ + + ++
Sbjct: 3 RAKRKQFFRNFVISIFASTLVIIGFFTLIVYLK-----QKNFNEMERRVFAEQTVKGPNI 57
Query: 76 PLVDYQFIANRLDFIPDVIKVLPFVSGQA-FVSGLSSGGSGVLVRGISNSDFSYLQNSFS 134
++ + L + +SGQ S++ + L
Sbjct: 58 KFYSHRKLNMGLMSDSIMYSSYKNISGQPVKWIDEIYEYDVWGYMSRSHNGNTQLDEGPP 117
Query: 135 RFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGM 194
G + + + L + + + + + K+YT+ +
Sbjct: 118 EGSGTRIDYNIQTMQREMRFYLPFMKYENYVNDLKGIGDLKNKVAEVGLSFDKAYTMDEI 177
Query: 195 FRMRFPDYDNGMVYMSLQEAQL 216
R+ + ++ + +
Sbjct: 178 MRILPKNVQPVWFWVDTYDEKK 199
>gi|325108876|ref|YP_004269944.1| hypothetical protein Plabr_2320 [Planctomyces brasiliensis DSM
5305]
gi|324969144|gb|ADY59922.1| protein of unknown function DUF214 [Planctomyces brasiliensis DSM
5305]
Length = 450
Score = 35.1 bits (78), Expect = 9.4, Method: Composition-based stats.
Identities = 9/42 (21%), Positives = 22/42 (52%), Gaps = 6/42 (14%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNG 52
+A + L R S ++ +G++ GV ++I ++++ G
Sbjct: 12 LALKSLLLQRLR------SGLTMLGIVFGVFSVIAMLAIGEG 47
>gi|308125710|ref|ZP_05776861.2| antimicrobial peptide ABC transporter, permease protein [Vibrio
parahaemolyticus K5030]
gi|308115201|gb|EFO52741.1| antimicrobial peptide ABC transporter, permease protein [Vibrio
parahaemolyticus K5030]
Length = 400
Score = 35.1 bits (78), Expect = 9.4, Method: Composition-based stats.
Identities = 21/228 (9%), Positives = 62/228 (27%), Gaps = 6/228 (2%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYYPLVDYQ----FIA 84
S ++ I + GV++++V++++ GF + + +V + +Q
Sbjct: 15 SVLAIIAIAWGVISVVVLIALGEGFYRHQTQSFSFMVNNVQVVFPSSTSKPWQGLASRRQ 74
Query: 85 NRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSNDF 144
+ + QA + ++G + S ++
Sbjct: 75 IDIPQEKVDMIKQSGFVQQASSVYAKWDANITNLKGQNLSSTVSGIDTSYFPLIQRKLQS 134
Query: 145 DRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDYDN 204
+ + + GI + D+
Sbjct: 135 GSRNLSPSDMKNHTRVAVLGDQIAQMGGIQIGDRLKVNGIPFLVIGITVGEDTGISFGDS 194
Query: 205 GMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGV 252
V++ + ++ + + + + +D +NIV +
Sbjct: 195 RTVFIPQTTYRDLWDAKPWM--VLMKPRDGMDAPSFRQNIVNFFAKQL 240
>gi|331268489|ref|YP_004394981.1| putative ABC transporter permease [Clostridium botulinum
BKT015925]
gi|329125039|gb|AEB74984.1| putative ABC transporter, permease protein [Clostridium botulinum
BKT015925]
Length = 864
Score = 35.1 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 31/82 (37%), Gaps = 6/82 (7%)
Query: 11 VAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVI 70
+ WR+L N+K ++I + I + G+ + M ++ +I + NG+
Sbjct: 7 LTWRHLKQNKKRTILTIIGIVLAISLFSGIATFMFSM------QQGLIDKKRKENGNWEF 60
Query: 71 QQKYYPLVDYQFIANRLDFIPD 92
+ + I N +
Sbjct: 61 EYCNLNVDKVNKIKNNFEVKDC 82
>gi|228962889|ref|ZP_04124131.1| ABC transporter, ATP-binding protein [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228796790|gb|EEM44158.1| ABC transporter, ATP-binding protein [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 393
Score = 35.1 bits (78), Expect = 9.5, Method: Composition-based stats.
Identities = 23/244 (9%), Positives = 75/244 (30%), Gaps = 10/244 (4%)
Query: 10 IVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVV 69
+A + +++ S ++ +G++IGV ++I V+++ G + + +G V
Sbjct: 2 KIALSSILAHKLR------SALTMLGIIIGVGSIITVVAIGQGGEAALKSQFVGSGNQTV 55
Query: 70 IQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYL 129
+ D + + +++ S + + +
Sbjct: 56 PIHYSADMNDPFGMGMVEAPKITEEDIFEIKKIPEISHVVTTNSSMEPLDIEDKVEMVSI 115
Query: 130 QNSFSRFYGNVSNDFDRGKGVI---IGKDLARNLGISIGDKINILSPYGDVTPMGMGIRS 186
S ++ +G+ + + + + + + + +
Sbjct: 116 TGLDSEYFSVNKVKLLKGRSLQESDVDQGNNVVMISKQMEDKVFKDANPVGKIIEIKGQP 175
Query: 187 KSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVR 246
+ F + + + ++ + I V K+ D +E+ + V
Sbjct: 176 MQIIGVYKSDNEFMGMGPSEALVPISLWPTLYG-KDEIQNISVQAKNVDDLEQAGKKAVD 234
Query: 247 ILGN 250
+L +
Sbjct: 235 VLNS 238
>gi|255038588|ref|YP_003089209.1| hypothetical protein Dfer_4843 [Dyadobacter fermentans DSM 18053]
gi|254951344|gb|ACT96044.1| protein of unknown function DUF214 [Dyadobacter fermentans DSM
18053]
Length = 786
Score = 35.1 bits (78), Expect = 9.6, Method: Composition-based stats.
Identities = 36/285 (12%), Positives = 84/285 (29%), Gaps = 39/285 (13%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVM-ALIVVMSV-----MNGF-RE 55
+ + + +AWR L N+ + I+I +G+ +G+ +L++++ V M+ F
Sbjct: 1 MLRNY-LKIAWRNLLKNKTFSSINI------LGLALGMACSLLIMLWVQDEIKMDRFHEN 53
Query: 56 DMIKRVLGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSG 115
D + N H + YP N + IP++ K + + V + +
Sbjct: 54 DARLYSVMENQHYSGEINTYPATPGILAENIVKDIPEIEKASQILWEETPVLLVGNVFDN 113
Query: 116 VLVRGISNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYG 175
R + + D G +++ + ++ +
Sbjct: 114 EKGRFVQGDFLTMFSFKL------THGDAKTALKRPDGIVISQKIADKYFKGVDPIGKAM 167
Query: 176 DVTPMGMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPD 235
V + + + + D+ N V +
Sbjct: 168 RVDNKHDVVVTGVLDEVSRYSSMKFDFLMSYDVWQKGAPWSKEWGNNGPRC-AVMLAKNA 226
Query: 236 AIEKTHENIVRIL----------------GNGVVVIDWQ--QRYQ 262
I+K + I + G + +W+ Q+
Sbjct: 227 DIDKVNAKIEDYIKTKNKDSNVDLFLIHYGESYLYSNWEAGQQNG 271
>gi|47565256|ref|ZP_00236298.1| ABC transporter, ATP-binding protein [Bacillus cereus G9241]
gi|208742146|ref|YP_002267598.1| hypothetical protein pBC210_00105 [Bacillus cereus]
gi|47557610|gb|EAL15936.1| ABC transporter, ATP-binding protein [Bacillus cereus G9241]
Length = 403
Score = 35.1 bits (78), Expect = 9.6, Method: Composition-based stats.
Identities = 23/246 (9%), Positives = 80/246 (32%), Gaps = 10/246 (4%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A + +++ S ++ +G++IGV ++I V+++ G + + +G
Sbjct: 6 SMKIALSSILAHKLR------SALTMLGIIIGVGSIITVVAIGQGGEAALKSQFVGSGNQ 59
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
V + D + + +++ S + +
Sbjct: 60 TVPIHYSADMNDPFGMGMVEAPKITEEDIFEIKKIPEISHVVTTNSSMEPLDIEDKKEMV 119
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVI---IGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ S ++ + +G+ + + + + ++ + M
Sbjct: 120 NITGLDSEYFAVNKVNLLKGRSLQESDVDQGNNVVMISKKMEENMFADVNPVGKIIEMKG 179
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + F + ++ + + + ++ + I V K+ D +E+ +
Sbjct: 180 QPMQIIGVYNSDNEFMEMESSEALVPISLWPTLYG-KDEIQDISVQAKNVDHLEQAGKKA 238
Query: 245 VRILGN 250
+L +
Sbjct: 239 ADVLNS 244
>gi|167463991|ref|ZP_02329080.1| ABC transporter, ATP-binding/permease protein [Paenibacillus larvae
subsp. larvae BRL-230010]
Length = 534
Score = 35.1 bits (78), Expect = 9.7, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 1 MSIFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKR 60
MS+F+ + +++ L + + I+ SF IG+ IGV +V+++ NG M
Sbjct: 253 MSLFTATSL--SFKNLLTKKGRTIIT--SFAGSIGI-IGVA---LVLALSNGLSIYMTNT 304
Query: 61 VLG 63
Sbjct: 305 QQN 307
>gi|324323862|gb|ADY24905.1| putative ABC-transporter permease protein [Bacillus thuringiensis
serovar finitimus YBT-020]
Length = 399
Score = 35.1 bits (78), Expect = 9.8, Method: Composition-based stats.
Identities = 21/246 (8%), Positives = 76/246 (30%), Gaps = 10/246 (4%)
Query: 8 EVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH 67
+ +A + +++ S ++ +G++IGV ++I V+++ G + + +G
Sbjct: 6 SMKIALSSILAHKLR------SALTMLGIIIGVGSIITVVAIGQGGEAALKSQFVGSGNQ 59
Query: 68 VVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFS 127
+ + D + + +++ S + +
Sbjct: 60 TIPIHYSPDINDSFSMDMLEVPKITEEDIFEIKKIPEIAHIVTTNSSMESLDIEDKKEMV 119
Query: 128 YLQNSFSRFYGNVSNDFDRGKGVI---IGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
+ S ++ +G+ + + + + ++ + +
Sbjct: 120 NITGLDSEYFTVNKVKVLKGRSLQELDVDQGNNVVMINKQMEEKVFKDVNPVGKIIEIKS 179
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENI 244
+ + F + + + ++ + I V K+ D +E+ +
Sbjct: 180 QPLQIIGVYQSDNEFMGMGPSEALVPISLWPTMYG-KDEIQNISVQAKNVDHLEQAGKKA 238
Query: 245 VRILGN 250
+L +
Sbjct: 239 ADVLNS 244
>gi|325286074|ref|YP_004261864.1| hypothetical protein Celly_1165 [Cellulophaga lytica DSM 7489]
gi|324321528|gb|ADY28993.1| protein of unknown function DUF214 [Cellulophaga lytica DSM 7489]
Length = 814
Score = 35.1 bits (78), Expect = 9.8, Method: Composition-based stats.
Identities = 24/259 (9%), Positives = 60/259 (23%), Gaps = 16/259 (6%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMN-GFREDMIKRV 61
+ + +A+R L++N+ + I IS + + + V +I +M + F + +
Sbjct: 1 MIKNY-FKIAFRNLWNNKLFSLIK----ISSLAIGLSVSFVIGLMVYYDFTFDKFHPDKD 55
Query: 62 LGINGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGI 121
+ D + L V+ L +
Sbjct: 56 YIYRVTTEFVTPEGSFYNPGVSFPLGDALKQNSASLAAVAPFLTTYPLHIKNTVTDKTFK 115
Query: 122 SNSDFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLA-RNLGISIGDKINILSPYGDVTPM 180
+ Y F + + + L + +
Sbjct: 116 NPDYVIYADKGFFNVFKYRWLAGSKESALESPNQLVLSEKRAKKYFPNTAFTDIIGAHMV 175
Query: 181 GMGIRSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQ---------LYFNLENAVSGIEVFV 231
+ T + D Q +N N+ S + +
Sbjct: 176 YNDTINMQVTGVVANFTERTDIVFEEFISLKTAHQSDMTSAVLSSNWNGTNSASQLFIKT 235
Query: 232 KDPDAIEKTHENIVRILGN 250
+ + ++
Sbjct: 236 SKNTKAKNVQLTLNKLAKE 254
>gi|225570302|ref|ZP_03779327.1| hypothetical protein CLOHYLEM_06398 [Clostridium hylemonae DSM
15053]
gi|225160834|gb|EEG73453.1| hypothetical protein CLOHYLEM_06398 [Clostridium hylemonae DSM
15053]
Length = 874
Score = 35.1 bits (78), Expect = 9.8, Method: Composition-based stats.
Identities = 26/249 (10%), Positives = 74/249 (29%), Gaps = 8/249 (3%)
Query: 5 SRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGI 64
+ + ++ R L SNR + + + + V+ S+ G + ++++
Sbjct: 6 RKVVIKLSNRNLKSNRMRN------IFAVGAITLTCILFTVLSSIGVGMIQVSQEQIMRE 59
Query: 65 NGHVVIQQKYYPLVDYQFIANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNS 124
G L + + + + + + + + NS
Sbjct: 60 VGGKFHASLEGTLKEEMESITEDPRVKEFSWNIYVGHVENILKRNGEIRYTSSKKELENS 119
Query: 125 DFSYLQNSFSRFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGI 184
S + + ++ D + + +L + ++ + + V G
Sbjct: 120 FISLKEGKMPKNEDDIIIDTFILDELKLPHELGVKVPLTFYFQGEKIEKTFKVCGWYEGD 179
Query: 185 RSKSYTVLGMFRMRFPDYDNGMVYMSLQEAQLYFNLENAVS--GIEVFVKDPDAIEKTHE 242
+ L + + + +E ++ V + +F IE T +
Sbjct: 180 GVSHASQLYISKNYWKKLKGDKTGNDFKEWARKHPEDSNVGVYTVGLFFDSTKNIESTVQ 239
Query: 243 NIVRILGNG 251
+I++ G
Sbjct: 240 SIIKDAGYE 248
>gi|189464238|ref|ZP_03013023.1| hypothetical protein BACINT_00575 [Bacteroides intestinalis DSM
17393]
gi|189438028|gb|EDV07013.1| hypothetical protein BACINT_00575 [Bacteroides intestinalis DSM
17393]
Length = 414
Score = 35.1 bits (78), Expect = 9.8, Method: Composition-based stats.
Identities = 30/237 (12%), Positives = 66/237 (27%), Gaps = 12/237 (5%)
Query: 29 SFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGH------VVIQQKYYPLVDYQF 82
S ++ GV G+ L+ ++ G ++ M + G + + Y ++
Sbjct: 22 SLLTAFGVFWGIFMLVALIGGGQGMQQAMSSQFEGFATNSAFLVSQKTGEAYKGFRKGRW 81
Query: 83 IANRLDFIPDVIKVLPFVSGQAFVSGLSSGGSGVLVRGISNSDFSYLQNSFSRFYGNVSN 142
L I + + + + +
Sbjct: 82 WDLELSDIERLRHGVNEIDVITPSIAYWGRTAIH--GDKKYDCSVKGLYPEYEHIEHQEM 139
Query: 143 DFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGMFRMRFPDY 202
+ R + K+ + I ++ P D + + Y V+GM
Sbjct: 140 AYGRFINDVDIKEARKVCVIGKRVYESLFRPGEDPCGKYIRVDGIYYQVIGMCSSEGNMN 199
Query: 203 DNGM----VYMSLQEAQLYFNLENAVSGIEVFVKDPDAIEKTHENIVRILGNGVVVI 255
G V + + +NL N + I VK + + + RI+ +
Sbjct: 200 IQGQASEAVTLPYTTMKQAYNLGNRIHVICFTVKPNIKVTDIQDKVERIVKAAHYIS 256
>gi|307299749|ref|ZP_07579542.1| protein of unknown function DUF214 [Thermotogales bacterium
mesG1.Ag.4.2]
gi|306914615|gb|EFN45008.1| protein of unknown function DUF214 [Thermotogales bacterium
mesG1.Ag.4.2]
Length = 834
Score = 35.1 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 7/39 (17%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 6 RFEVIVAWRYLFSNRKNAFISIAS--FISFIGVMIGVMA 42
+ + +A R + N + IS+ S + + + A
Sbjct: 400 KIPLKLAKRNMRRNLRTTIISVISMTMAATLFIAFSYFA 438
>gi|196047487|ref|ZP_03114698.1| conserved hypothetical protein [Bacillus cereus 03BB108]
gi|196021702|gb|EDX60398.1| conserved hypothetical protein [Bacillus cereus 03BB108]
Length = 315
Score = 35.1 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 21/202 (10%), Positives = 57/202 (28%), Gaps = 7/202 (3%)
Query: 17 FSNRKNAFISI-ASFISFIGVMIGVMALIVVMSVMNGFREDMIKRVLGINGHVVIQQKYY 75
+ RK F + S + V+IG LIV + +++ + + ++
Sbjct: 3 RAKRKQFFRNFVISIFASTLVIIGSFTLIVYLK-----QKNFNEMERRVFAEQTVKGPNI 57
Query: 76 PLVDYQFIANRLDFIPDVIKVLPFVSGQA-FVSGLSSGGSGVLVRGISNSDFSYLQNSFS 134
++ + L + +SGQ S++ + L
Sbjct: 58 KFYSHRKLNMGLMSDSIMYSSYKNISGQPVKWIDEIYEYDVWGYMSRSHNGNTQLDEGPP 117
Query: 135 RFYGNVSNDFDRGKGVIIGKDLARNLGISIGDKINILSPYGDVTPMGMGIRSKSYTVLGM 194
G + + + L + + + + + K+YT+ +
Sbjct: 118 EGSGTRIDYNIQTMQREMRFYLPFMKYENYVNDLKGIGDLKNKVAEVALSFDKAYTMDEI 177
Query: 195 FRMRFPDYDNGMVYMSLQEAQL 216
+ ++ + +
Sbjct: 178 MGILPKGVQPVWFWVDTYDEKK 199
>gi|91218325|ref|ZP_01255270.1| putative FtsX-related transmembrane transport protein
[Psychroflexus torquis ATCC 700755]
gi|91183534|gb|EAS69932.1| putative FtsX-related transmembrane transport protein
[Psychroflexus torquis ATCC 700755]
Length = 810
Score = 35.1 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 3 IFSRFEVIVAWRYLFSNRKNAFISIASFISFIGVMIGVMALIV 45
+ + +AWR L N+ I+I IG I + ++
Sbjct: 1 MIKNY-FKIAWRNLLKNKGFTAINIIGLSLGIGCFIMISMFVI 42
Database: nr
Posted date: May 13, 2011 4:10 AM
Number of letters in database: 999,999,932
Number of sequences in database: 2,987,209
Database: /data/usr2/db/fasta/nr.01
Posted date: May 13, 2011 4:17 AM
Number of letters in database: 999,998,956
Number of sequences in database: 2,896,973
Database: /data/usr2/db/fasta/nr.02
Posted date: May 13, 2011 4:23 AM
Number of letters in database: 999,999,979
Number of sequences in database: 2,907,862
Database: /data/usr2/db/fasta/nr.03
Posted date: May 13, 2011 4:29 AM
Number of letters in database: 999,999,513
Number of sequences in database: 2,932,190
Database: /data/usr2/db/fasta/nr.04
Posted date: May 13, 2011 4:33 AM
Number of letters in database: 792,586,372
Number of sequences in database: 2,260,650
Lambda K H
0.310 0.0964 0.246
Lambda K H
0.267 0.0297 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,311,483,727
Number of Sequences: 13984884
Number of extensions: 48794075
Number of successful extensions: 457677
Number of sequences better than 10.0: 4808
Number of HSP's better than 10.0 without gapping: 2765
Number of HSP's successfully gapped in prelim test: 2043
Number of HSP's that attempted gapping in prelim test: 449247
Number of HSP's gapped (non-prelim): 6796
length of query: 270
length of database: 4,792,584,752
effective HSP length: 137
effective length of query: 133
effective length of database: 2,876,655,644
effective search space: 382595200652
effective search space used: 382595200652
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.3 bits)
S2: 79 (35.5 bits)