HHsearch alignment for GI: peg_789 and conserved domain: COG0577
>COG0577 SalY ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms].
Probab=99.86 E-value=5.2e-21 Score=125.21 Aligned_cols=129 Identities=28% Similarity=0.507 Sum_probs=109.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 99999999999999999999999999999999980755222203688898765323345667887531000000001200
Q 537021.9.peg.7 3 VILALIVLVAALNIISSLVMLVQERRRDIAILRTMGARISSIMSIFFMIGAFIGIAGTGMGMIVGILISCNVEAIRKFFL 82 (143)
Q Consensus 3 ii~~~i~~i~~~~i~~~~~~~i~~R~~eigilkalG~s~~~I~~~~~~E~~~l~~ig~i~G~~lg~~l~~~i~~~~~~~~ 82 (143)
T Consensus 291 ~~~~~~~~v~~i~i~~~~~~~v~er~~eigi~ka~G~~~~~i~~~~~~e~~~~~~~g~~~g~~~~~~~~~~i~~~~~--- 367 (419)
T COG0577 291 AIAVISLIVGAIGIYNILLVSVLERTREIGILKALGATRREILLQFLLEALILGLIGGLLGILLGLGLSLLLALLLI--- 367 (419)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
T ss_conf 89999999999999999999999987889999970998487999999999999999999999999999999999987---
Q ss_pred CCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
Q ss_conf 0268513680022331057044069999999999999999999999998299999982187
Q 537021.9.peg.7 83 HTLGVVIFDTEAYLLTELPSKISWVEVSWIISMALALSLLATIFPSWKASRIDPVKVLRGE 143 (143)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~pa~~~~k~~p~~~lr~e 143 (143)
T Consensus 368 ---~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~pa~~~~k~~~~~~l~~~ 419 (419)
T COG0577 368 ---AS------LFFLLALPILLSPLLILLALIVALLVGVIAGLLPARKAAKLDPIEALRKE 419 (419)
T ss_pred ---HH------HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf ---66------66566777752799999999999999999999999999876299996359