Query 537021.9.peg.813_1
Match_columns 41
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 33803
Date Wed May 25 01:15:55 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_813.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 >2bih_A Nitrate reductase [NAD 15.4 61 0.0018 15.5 1.0 13 5-17 48-60 (87)
2 >1flc_A Haemagglutinin-esteras 10.4 73 0.0021 15.1 0.2 25 7-31 22-46 (67)
3 >2c5u_A RNA ligase, T4 RNA lig 8.8 1.8E+02 0.0052 13.3 1.8 26 11-36 28-61 (75)
4 >1nkw_Y 50S ribosomal protein 8.4 1.1E+02 0.0033 14.2 0.5 10 5-14 35-44 (56)
5 >1vs6_Z 50S ribosomal protein 7.4 1.4E+02 0.0042 13.8 0.6 10 5-14 8-17 (42)
6 >2q1f_A Chondroitinase; alpha 6.8 1.6E+02 0.0048 13.5 0.7 11 5-15 95-105 (175)
7 >2z4t_A Beta-galactoside alpha 5.8 2.5E+02 0.0075 12.6 3.5 23 18-40 76-98 (111)
8 >1xhh_A Beta-microseminoprotei 5.2 2E+02 0.0058 13.1 0.4 14 4-17 16-30 (50)
9 >1hn0_A Chondroitin ABC lyase 5.2 2.3E+02 0.0068 12.8 0.7 11 5-15 157-167 (210)
10 >1zsg_B Serine/threonine-prote 5.0 1.7E+02 0.0049 13.4 -0.1 12 22-33 8-19 (26)
No 1
>>2bih_A Nitrate reductase [NADPH]; FAD, flavoprotein, heme, molybdenum, nitrate assimilation, oxidoreductase; HET: MTV; 2.60A {Pichia angusta} (A:1-87)
Probab=15.39 E-value=61 Score=15.49 Aligned_cols=13 Identities=38% Similarity=0.905 Sum_probs=10.2
Q ss_pred ECCCCCCCCEEEE
Q ss_conf 4148986310689
Q 537021.9.peg.8 5 NISGNHPFNAKIR 17 (41)
Q Consensus 5 nisgnhpfnakir 17 (41)
-+.|.|||||.-.
T Consensus 48 ~~~~~~P~NaEpp 60 (87)
T 2bih_A 48 RLTGSHPFNSEPP 60 (87)
T ss_dssp ESSTTSSCEEECC
T ss_pred EECCCCCCCCCCC
T ss_conf 8648898988979
No 2
>>1flc_A Haemagglutinin-esterase-fusion glycoprotein; receptor binding, membrane fusion, hydrolase; HET: NDG NAG BMA MAN; 3.20A {Influenza c virus} (A:1-41,A:407-432)
Probab=10.36 E-value=73 Score=15.12 Aligned_cols=25 Identities=40% Similarity=0.478 Sum_probs=18.5
Q ss_pred CCCCCCCEEEEEEEECCCCCCCCEE
Q ss_conf 4898631068999831898655306
Q 537021.9.peg.8 7 SGNHPFNAKIRIFSFVPPKASHHKS 31 (41)
Q Consensus 7 sgnhpfnakirifsfvppkashhks 31 (41)
.||---...-|.|..|.||||--|-
T Consensus 22 ggnlyateekrmfelvkpkasipki 46 (67)
T 1flc_A 22 GGNLYATEEKRMFELVKPKASIPKI 46 (67)
T ss_dssp TSCEEEEEEEESSCCCCCBCTSCEE
T ss_pred CCCEEEHHHHHHHHHHCCCCCCCCC
T ss_conf 7621111244555331655547767
No 3
>>2c5u_A RNA ligase, T4 RNA ligase 1; nucleotidyl transferase, ATP-binding; HET: APC; 2.21A {Bacteriophage T4} (A:1-75)
Probab=8.81 E-value=1.8e+02 Score=13.32 Aligned_cols=26 Identities=31% Similarity=0.475 Sum_probs=17.9
Q ss_pred CCCEEEEEEEEC--------CCCCCCCEEEEEEE
Q ss_conf 631068999831--------89865530689988
Q 537021.9.peg.8 11 PFNAKIRIFSFV--------PPKASHHKSIFFSF 36 (41)
Q Consensus 11 pfnakirifsfv--------ppkashhksiffsf 36 (41)
+...|.||||+- -|.|-.-..|.|..
T Consensus 28 ~mgt~~RIFsY~~AsYsDWl~p~ALecRGIMFem 61 (75)
T 2c5u_A 28 ASGRTYRIFSYNYASYSDWLLPDALECRGIXFEX 61 (75)
T ss_dssp TTCCEEEEEEESCCCHHHHTSTTGGGTTTCEEEE
T ss_pred CCCCEEEEEECCCCCHHHHCCCCHHHCCCEEEEC
T ss_conf 1587267886255435654893224338159982
No 4
>>1nkw_Y 50S ribosomal protein L31; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} (Y:1-56)
Probab=8.40 E-value=1.1e+02 Score=14.23 Aligned_cols=10 Identities=50% Similarity=0.674 Sum_probs=6.3
Q ss_pred ECCCCCCCCE
Q ss_conf 4148986310
Q 537021.9.peg.8 5 NISGNHPFNA 14 (41)
Q Consensus 5 nisgnhpfna 14 (41)
--|++|||-.
T Consensus 35 vcs~cHPFyT 44 (56)
T 1nkw_Y 35 VWSGVHPFWT 44 (56)
T ss_pred ECCCCCCCEE
T ss_conf 8689877282
No 5
>>1vs6_Z 50S ribosomal protein L31; ribosome, kasugamycin; 3.46A {Escherichia coli} (Z:29-70)
Probab=7.39 E-value=1.4e+02 Score=13.77 Aligned_cols=10 Identities=40% Similarity=0.471 Sum_probs=6.7
Q ss_pred ECCCCCCCCE
Q ss_conf 4148986310
Q 537021.9.peg.8 5 NISGNHPFNA 14 (41)
Q Consensus 5 nisgnhpfna 14 (41)
--|++|||-.
T Consensus 8 v~s~~HPfyT 17 (42)
T 1vs6_Z 8 VCSKCHPFFT 17 (42)
T ss_dssp CCSSSCCBCC
T ss_pred ECCCCCCCCC
T ss_conf 7799887491
No 6
>>2q1f_A Chondroitinase; alpha plus beta, lyase; 2.85A {Bacteroides thetaiotaomicron} (A:416-590)
Probab=6.85 E-value=1.6e+02 Score=13.50 Aligned_cols=11 Identities=36% Similarity=0.546 Sum_probs=8.1
Q ss_pred ECCCCCCCCEE
Q ss_conf 41489863106
Q 537021.9.peg.8 5 NISGNHPFNAK 15 (41)
Q Consensus 5 nisgnhpfnak 15 (41)
-+||.|||+-.
T Consensus 95 ~lsGRhP~g~~ 105 (175)
T 2q1f_A 95 SXSGRHPDGKG 105 (175)
T ss_dssp GGCTTCTTSCC
T ss_pred CCCCCCCCCCC
T ss_conf 21354776542
No 7
>>2z4t_A Beta-galactoside alpha-2,6-sialyltransferase; GT-B fold, immunoglobulin-like beta-sandwich fold, glycosyltransferase; HET: LBT C5P; 2.50A {Photobacterium SP} (A:1-111)
Probab=5.84 E-value=2.5e+02 Score=12.57 Aligned_cols=23 Identities=26% Similarity=0.499 Sum_probs=16.2
Q ss_pred EEEECCCCCCCCEEEEEEEEEEC
Q ss_conf 99831898655306899887512
Q 537021.9.peg.8 18 IFSFVPPKASHHKSIFFSFVNIS 40 (41)
Q Consensus 18 ifsfvppkashhksiffsfvnis 40 (41)
-|+||.|.-......-|.|-.++
T Consensus 76 SfdfVAPeLdqDEKyCF~F~G~~ 98 (111)
T 2z4t_A 76 SLSVVAPRLDDDEKYCFDFNGVS 98 (111)
T ss_dssp SEEEECCCCSSCEEEEEEEEEEE
T ss_pred EEEEECCCCCCCCCCEEEEECCC
T ss_conf 88776555466620048853446
No 8
>>1xhh_A Beta-microseminoprotein; beta srands, novel fold, prostatic secretory protein, solution structure, Na+, K+ ATPase inhibitor, unknown function; NMR {Sus scrofa} PDB: 2iz4_A (A:1-50)
Probab=5.20 E-value=2e+02 Score=13.08 Aligned_cols=14 Identities=29% Similarity=0.695 Sum_probs=7.7
Q ss_pred EECCCC-CCCCEEEE
Q ss_conf 541489-86310689
Q 537021.9.peg.8 4 TNISGN-HPFNAKIR 17 (41)
Q Consensus 4 tnisgn-hpfnakir 17 (41)
+...|| ||+|.+-+
T Consensus 16 ~DLkG~~Hplns~Wk 30 (50)
T 1xhh_A 16 QDLKGVSHPLNSVWK 30 (50)
T ss_dssp EETTTEEEECCCCEE
T ss_pred CCCCCCEEECCCEEC
T ss_conf 978996933889888
No 9
>>1hn0_A Chondroitin ABC lyase I; chondroitinase ABC I, chonroitin digestion, mechanism; 1.90A {Proteus vulgaris} (A:242-276,A:435-609)
Probab=5.16 E-value=2.3e+02 Score=12.76 Aligned_cols=11 Identities=45% Similarity=1.053 Sum_probs=8.3
Q ss_pred ECCCCCCCCEE
Q ss_conf 41489863106
Q 537021.9.peg.8 5 NISGNHPFNAK 15 (41)
Q Consensus 5 nisgnhpfnak 15 (41)
-+||.|||+..
T Consensus 157 ~lsGRhP~g~~ 167 (210)
T 1hn0_A 157 PLAGRHPFNSP 167 (210)
T ss_dssp GGCTTCTTSCC
T ss_pred CCCCCCCCCCH
T ss_conf 65788987662
No 10
>>1zsg_B Serine/threonine-protein kinase PAK 1; SH3-peptide complex, transferase; NMR {Homo sapiens} (B:)
Probab=5.00 E-value=1.7e+02 Score=13.42 Aligned_cols=12 Identities=33% Similarity=0.930 Sum_probs=0.0
Q ss_pred CCCCCCCCEEEE
Q ss_conf 189865530689
Q 537021.9.peg.8 22 VPPKASHHKSIF 33 (41)
Q Consensus 22 vppkashhksif 33 (41)
+.|...|.|||+
T Consensus 8 iaprpehtksiy 19 (26)
T 1zsg_B 8 IAPRPEHTKSVY 19 (26)
T ss_dssp SCCCCSSSSCCS
T ss_pred CCCCCCCCCCEE
T ss_conf 036855453136
Done!