HHsearch alignment for GI: peg_816 and conserved domain: COG2003
>COG2003 RadC DNA repair proteins [DNA replication, recombination, and repair].
Probab=100.00 E-value=2.4e-39 Score=253.07 Aligned_cols=97 Identities=42% Similarity=0.651 Sum_probs=95.9
Q ss_pred CCCCCCCCEEEEEEEEECCCCEEEECHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEE
Q ss_conf 95156887734899854046358932999999999731968999955689898814778999999999997649889979
Q 537021.9.peg.8 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDH 80 (97)
Q Consensus 1 l~Ld~~~~li~~e~i~~Gt~~~~~v~~r~i~~~al~~~A~~vilaHNHPsG~~~PS~~Di~~T~~l~~a~~~l~i~llDH 80 (97)
T Consensus 128 L~Ld~qnrlI~~e~lf~GTi~~s~V~PREI~k~Al~~nAaavIlaHNHPSGd~~PS~aD~~iT~rl~~a~~ll~I~vLDH 207 (224)
T COG2003 128 LYLDSQNRLIATETLFIGTLNVSEVHPREIFKEALKYNAAAVILAHNHPSGDPTPSRADILITERLKEAGKLLGIRLLDH 207 (224)
T ss_pred HHHCCCCCEEEEEEEEEEECCCCEECHHHHHHHHHHHCCHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEE
T ss_conf 99547684331003775201450433799999999822135530015899999857788999999999987429331004
Q ss_pred EEECCCCEEEHHHCCCC
Q ss_conf 99859959974525899
Q 537021.9.peg.8 81 IIIGKDAFVSFKGLRII 97 (97)
Q Consensus 81 iIv~~~~~~S~re~gll 97 (97)
T Consensus 208 iIig~~~y~Sf~E~gll 224 (224)
T COG2003 208 IIIGEGLYISFAERGLL 224 (224)
T ss_pred EEECCCCEEEHHHHCCC
T ss_conf 78648858747761269