HHsearch alignment for GI: peg_816 and conserved domain: TIGR00608
>TIGR00608 radc DNA repair protein RadC; InterPro: IPR001405 RadC is a DNA repair protein found in many bacteria. They share a region of similarity at the C-terminus that contains two perfectly conserved histidine residues.; GO: 0006281 DNA repair.
Probab=100.00 E-value=8.2e-43 Score=273.46 Aligned_cols=97 Identities=47% Similarity=0.761 Sum_probs=96.0
Q ss_pred CCCCCCCCEEEEEEEEECCCCEEEECHHHHHHHHHHHCCCEEEEEEECCCC--CCCCCHHHHHHHHHHHHHHHHCCCEEE
Q ss_conf 951568877348998540463589329999999997319689999556898--988147789999999999976498899
Q 537021.9.peg.8 1 LFLDKHNILIADEVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSG--NPNPSDADINMTQNIITTLNPLNIIVH 78 (97)
Q Consensus 1 l~Ld~~~~li~~e~i~~Gt~~~~~v~~r~i~~~al~~~A~~vilaHNHPsG--~~~PS~~Di~~T~~l~~a~~~l~i~ll 78 (97)
T Consensus 125 lfLD~~nrli~~~~~~~Gt~~~v~v~PREi~keA~k~~A~alI~aHNHPSGGl~p~PS~~D~~~T~~l~~aae~l~i~lL 204 (223)
T TIGR00608 125 LFLDLKNRLIAKEVVFIGTVNHVLVHPREIIKEALKLSASALILAHNHPSGGLEPSPSKEDILITERLLKAAELLGIELL 204 (223)
T ss_pred EEECCCCCEECCEEEEEEEEEEEEECCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEE
T ss_conf 87168541010024565412422366507877887617430255653755298998687779999999988866286241
Q ss_pred EEEEECCCCEEEHHHCCCC
Q ss_conf 7999859959974525899
Q 537021.9.peg.8 79 DHIIIGKDAFVSFKGLRII 97 (97)
Q Consensus 79 DHiIv~~~~~~S~re~gll 97 (97)
T Consensus 205 DHLviG~g~~~Sfre~g~L 223 (223)
T TIGR00608 205 DHLVIGKGKYVSFREEGLL 223 (223)
T ss_pred EEEEECCCCEECHHCCCCC
T ss_conf 1778538741214500689