Query 537021.9.peg.816_1
Match_columns 97
No_of_seqs 103 out of 1329
Neff 5.7
Searched_HMMs 13730
Date Wed May 25 06:55:47 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_816.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1oi0a_ c.97.3.1 (A:) Hypothet 95.8 0.0041 3E-07 37.1 3.9 51 35-95 59-113 (121)
2 d1je0a_ c.56.2.1 (A:) 5'-deoxy 66.2 1.8 0.00013 21.6 2.5 42 49-90 119-160 (234)
3 d2csua1 c.2.1.8 (A:1-129) Acet 48.2 9.2 0.00067 17.3 6.5 48 28-78 78-125 (129)
4 d1ywxa1 d.12.1.3 (A:1-102) Rib 42.3 9.1 0.00066 17.4 2.9 26 40-69 17-42 (102)
5 d1oxja2 a.118.1.13 (A:656-763) 41.3 8.6 0.00063 17.5 2.6 30 46-75 33-64 (108)
6 d1gvfa_ c.1.10.2 (A:) Tagatose 40.4 12 0.00089 16.6 6.5 50 27-81 85-134 (284)
7 d1rvga_ c.1.10.2 (A:) Fructose 37.6 14 0.00099 16.3 6.5 50 27-81 84-133 (305)
8 d1xn9a_ d.12.1.3 (A:) Ribosoma 36.2 13 0.00095 16.4 2.9 20 40-61 17-36 (101)
9 d1rxya_ c.56.2.1 (A:) Uridine 32.4 13 0.00094 16.5 2.4 41 52-92 123-163 (250)
10 d2ac7a1 c.56.2.1 (A:2-232) Pur 30.5 14 0.0011 16.2 2.4 40 51-90 121-160 (231)
11 d1hl9a2 c.1.8.11 (A:7-356) Put 28.0 20 0.0014 15.4 4.6 58 20-77 94-162 (350)
12 d2q66a2 d.218.1.3 (A:5-201) Po 26.1 21 0.0016 15.2 3.7 27 49-75 8-34 (197)
13 d1q79a2 d.218.1.3 (A:19-214) P 22.3 25 0.0018 14.7 3.7 28 48-75 6-33 (196)
14 d2g1da1 d.12.1.3 (A:1-98) Ribo 21.7 26 0.0019 14.7 3.0 28 40-70 17-44 (98)
15 d1xnga1 c.26.2.1 (A:3-257) NH3 21.3 23 0.0017 15.0 2.0 55 13-78 27-81 (255)
No 1
>d1oi0a_ c.97.3.1 (A:) Hypothetical protein AF2198 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=95.82 E-value=0.0041 Score=37.07 Aligned_cols=51 Identities=24% Similarity=0.425 Sum_probs=38.4
Q ss_pred HHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEC----CCCEEEHHHCC
Q ss_conf 97319689999556898988147789999999999976498899799985----99599745258
Q 537021.9.peg.8 35 LELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIG----KDAFVSFKGLR 95 (97)
Q Consensus 35 l~~~A~~vilaHNHPsG~~~PS~~Di~~T~~l~~a~~~l~i~llDHiIv~----~~~~~S~re~g 95 (97)
...+-.-+-+.|-||+|.+.||+.|++.- +..|+ =|+|++ .++|-.|+..|
T Consensus 59 ~~~~~~ivgi~HSHP~~~a~PS~~D~~~~-------~~~g~---~~~Ivs~p~~~~~~~~~~~~G 113 (121)
T d1oi0a_ 59 LPIGMKVFGTVHSHPSPSCRPSEEDLSLF-------TRFGK---YHIIVCYPYDENSWKCYNRKG 113 (121)
T ss_dssp --CCCEEEEEEEEESSSCCSCCHHHHHHH-------HHSCS---EEEEEETTCCTTCEEEEETTS
T ss_pred HHCCCEEEEEEEECCCCCCCCCHHHHHHH-------HCCCC---EEEEEECCCCCCCEEEEECCC
T ss_conf 31587699999726899997698999742-------50698---899996788988899994898
No 2
>d1je0a_ c.56.2.1 (A:) 5'-deoxy-5'-methylthioadenosine phosphorylase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=66.17 E-value=1.8 Score=21.55 Aligned_cols=42 Identities=19% Similarity=0.267 Sum_probs=36.3
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEE
Q ss_conf 898988147789999999999976498899799985995997
Q 537021.9.peg.8 49 PSGNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVS 90 (97)
Q Consensus 49 PsG~~~PS~~Di~~T~~l~~a~~~l~i~llDHiIv~~~~~~S 90 (97)
|.+.+.|+.+|..+++.+.++++..+++..=-.|++.+.||+
T Consensus 119 ~~~~~~~~~~d~~l~~~l~~~~~~~~~~~~~G~i~T~D~F~~ 160 (234)
T d1je0a_ 119 RDNACVASTPDFELTNKLVTSFSKRNLKYYVGNVFSSDAFYA 160 (234)
T ss_dssp SSCCBCCCCCCHHHHHHHHHHHHHTTCCEEEEEEEECSCTTC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECEECCCCCHH
T ss_conf 677776777786789999999987199767802344775202
No 3
>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=48.19 E-value=9.2 Score=17.32 Aligned_cols=48 Identities=6% Similarity=0.277 Sum_probs=40.8
Q ss_pred HHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEE
Q ss_conf 999999997319689999556898988147789999999999976498899
Q 537021.9.peg.8 28 REIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVH 78 (97)
Q Consensus 28 r~i~~~al~~~A~~vilaHNHPsG~~~PS~~Di~~T~~l~~a~~~l~i~ll 78 (97)
-++++.+...++.++++. .+|..+..++-..+.++|.+.++.-|++++
T Consensus 78 ~~~~~~~~~~g~~~~vi~---s~Gf~e~~~~~~~~~~~l~~~a~~~girv~ 125 (129)
T d2csua1 78 KDTLIQCGEKGVKGVVII---TAGFGETGEEGKREEKELVEIAHKYGMRII 125 (129)
T ss_dssp HHHHHHHHHHTCCEEEEC---CCSSTTSCHHHHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHCCCCEEEEE---CCCCCCCCHHHHHHHHHHHHHHHHCCCEEE
T ss_conf 888999997399889871---335464442159999999999998599796
No 4
>d1ywxa1 d.12.1.3 (A:1-102) Ribosomal protein S24e {Methanococcus maripaludis [TaxId: 39152]}
Probab=42.26 E-value=9.1 Score=17.36 Aligned_cols=26 Identities=15% Similarity=0.307 Sum_probs=17.8
Q ss_pred CEEEEEEECCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 689999556898988147789999999999
Q 537021.9.peg.8 40 TSIILVHNHPSGNPNPSDADINMTQNIITT 69 (97)
Q Consensus 40 ~~vilaHNHPsG~~~PS~~Di~~T~~l~~a 69 (97)
.-+++--.|| | ++||..|+. .+|.+.
T Consensus 17 kEi~~~v~h~-g-~Tpsr~ei~--~kla~~ 42 (102)
T d1ywxa1 17 REIKFTVSFD-A-ATPSIKDVK--MKLVAV 42 (102)
T ss_dssp EEEEEEEECS-S-CCCCHHHHH--HHHHHH
T ss_pred EEEEEEEECC-C-CCCCHHHHH--HHHHHH
T ss_conf 8999999788-9-998999999--999997
No 5
>d1oxja2 a.118.1.13 (A:656-763) RNA-binding protein Smaug {Drosophila melanogaster [TaxId: 7227]}
Probab=41.27 E-value=8.6 Score=17.50 Aligned_cols=30 Identities=23% Similarity=0.365 Sum_probs=24.9
Q ss_pred EECCCCCCCCCHHHH--HHHHHHHHHHHHCCC
Q ss_conf 556898988147789--999999999976498
Q 537021.9.peg.8 46 HNHPSGNPNPSDADI--NMTQNIITTLNPLNI 75 (97)
Q Consensus 46 HNHPsG~~~PS~~Di--~~T~~l~~a~~~l~i 75 (97)
---|++.+.|-++|+ ++||-+.+.|..+-.
T Consensus 33 PmKP~~~~~~~eeDip~qFtkVmgkvctqL~~ 64 (108)
T d1oxja2 33 PMKPLESPGPPEENIGLRFLKVIDIVTNTLQQ 64 (108)
T ss_dssp CCCCTTCCSCGGGCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 88888889998543149999999999999843
No 6
>d1gvfa_ c.1.10.2 (A:) Tagatose-1,6-bisphosphate aldolase {Escherichia coli [TaxId: 562]}
Probab=40.39 E-value=12 Score=16.60 Aligned_cols=50 Identities=10% Similarity=0.252 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 9999999997319689999556898988147789999999999976498899799
Q 537021.9.peg.8 27 IREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHI 81 (97)
Q Consensus 27 ~r~i~~~al~~~A~~vilaHNHPsG~~~PS~~Di~~T~~l~~a~~~l~i~llDHi 81 (97)
.-+.+++|++.+-+++.+ -|+..|=++.+..|+++.+.+...|+.+---+
T Consensus 85 ~~e~i~~ai~~GftSVMi-----D~S~lp~eeNi~~t~~vv~~ah~~gv~VE~El 134 (284)
T d1gvfa_ 85 SLDDIRRKVHAGVRSAMI-----DGSHFPFAENVKLVKSVVDFCHSQDCSVEAEL 134 (284)
T ss_dssp CHHHHHHHHHTTCCEEEE-----CCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHCCCCEEEE-----ECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_conf 447888887359875998-----79989999999999999999876434134445
No 7
>d1rvga_ c.1.10.2 (A:) Fructose-bisphosphate aldolase (FBP aldolase) {Thermus aquaticus [TaxId: 271]}
Probab=37.62 E-value=14 Score=16.34 Aligned_cols=50 Identities=16% Similarity=0.307 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 9999999997319689999556898988147789999999999976498899799
Q 537021.9.peg.8 27 IREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVHDHI 81 (97)
Q Consensus 27 ~r~i~~~al~~~A~~vilaHNHPsG~~~PS~~Di~~T~~l~~a~~~l~i~llDHi 81 (97)
.-+.++.|++.+-+|+.+ -|+..|=++.++.|+++.+.+...|+.+---+
T Consensus 84 ~~e~i~~ai~~GftSVMi-----DgS~l~~eeNi~~Tk~vv~~Ah~~gv~VEaEl 133 (305)
T d1rvga_ 84 SYESVLRALRAGFTSVMI-----DKSHEDFETNVRETRRVVEAAHAVGVTVEAEL 133 (305)
T ss_dssp SHHHHHHHHHTTCSEEEE-----CCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHCCCCEEEE-----CCCCCCHHHHHHHHHHHHHHHCHHCEEEEEEE
T ss_conf 746667887558866887-----68632479999999999997221100588632
No 8
>d1xn9a_ d.12.1.3 (A:) Ribosomal protein S24e {Methanosarcina mazei [TaxId: 2209]}
Probab=36.24 E-value=13 Score=16.44 Aligned_cols=20 Identities=20% Similarity=0.418 Sum_probs=15.1
Q ss_pred CEEEEEEECCCCCCCCCHHHHH
Q ss_conf 6899995568989881477899
Q 537021.9.peg.8 40 TSIILVHNHPSGNPNPSDADIN 61 (97)
Q Consensus 40 ~~vilaHNHPsG~~~PS~~Di~ 61 (97)
.-+.+--.|| | ++||..|+.
T Consensus 17 ~Ei~~~v~h~-g-~Tpsr~ei~ 36 (101)
T d1xn9a_ 17 RELDFIVKYE-G-STPSRNDVR 36 (101)
T ss_dssp EEEEEEEECS-S-SCCCHHHHH
T ss_pred EEEEEEEECC-C-CCCCHHHHH
T ss_conf 8999999889-9-998999999
No 9
>d1rxya_ c.56.2.1 (A:) Uridine phosphorylase {Escherichia coli [TaxId: 562]}
Probab=32.41 E-value=13 Score=16.45 Aligned_cols=41 Identities=17% Similarity=0.242 Sum_probs=33.4
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEHH
Q ss_conf 98814778999999999997649889979998599599745
Q 537021.9.peg.8 52 NPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVSFK 92 (97)
Q Consensus 52 ~~~PS~~Di~~T~~l~~a~~~l~i~llDHiIv~~~~~~S~r 92 (97)
...|..+|..+++.+.++++.++++..==++++.+.||+-.
T Consensus 123 ~~~~~~~d~~l~~~l~~~~~~~~~~~~~G~~~S~D~Fy~~~ 163 (250)
T d1rxya_ 123 LEFPAVADFECTTALVEAAKSIGATTHVGVTASSDTFYPGQ 163 (250)
T ss_dssp TTSCEECCHHHHHHHHHHHHHTTCCEEEEEEEEESCSSGGG
T ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC
T ss_conf 87586589999999999999719973020375024434443
No 10
>d2ac7a1 c.56.2.1 (A:2-232) Purine nucleoside phosphorylase, PNP {Bacillus anthracis [TaxId: 1392]}
Probab=30.50 E-value=14 Score=16.18 Aligned_cols=40 Identities=13% Similarity=0.145 Sum_probs=33.8
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEE
Q ss_conf 8988147789999999999976498899799985995997
Q 537021.9.peg.8 51 GNPNPSDADINMTQNIITTLNPLNIIVHDHIIIGKDAFVS 90 (97)
Q Consensus 51 G~~~PS~~Di~~T~~l~~a~~~l~i~llDHiIv~~~~~~S 90 (97)
|.+.|-.+|..+++++.++++..+++..--.+++.+.||+
T Consensus 121 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~T~D~F~~ 160 (231)
T d2ac7a1 121 GFDFAPAANFDLLKKAYDAGTEKGLHVRVGNVLTADVFYR 160 (231)
T ss_dssp TCCCCCBCCHHHHHHHHHHHHHHTCCEEEEEEEECSCSSC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC
T ss_conf 8875875899999999976776064237734760450101
No 11
>d1hl9a2 c.1.8.11 (A:7-356) Putative alpha-L-fucosidase, catalytic domain {Thermotoga maritima [TaxId: 2336]}
Probab=28.02 E-value=20 Score=15.39 Aligned_cols=58 Identities=9% Similarity=0.043 Sum_probs=44.5
Q ss_pred CCEEEECHHHHHHHHHHHCCCEEEEEEECCCCCCC-CC------H----HHHHHHHHHHHHHHHCCCEE
Q ss_conf 63589329999999997319689999556898988-14------7----78999999999997649889
Q 537021.9.peg.8 20 IDHVPVYIREIVQRCLELSATSIILVHNHPSGNPN-PS------D----ADINMTQNIITTLNPLNIIV 77 (97)
Q Consensus 20 ~~~~~v~~r~i~~~al~~~A~~vilaHNHPsG~~~-PS------~----~Di~~T~~l~~a~~~l~i~l 77 (97)
-+....+|.+.++.|-..+|..+|+.=.|=.|-+. || . ...++-+.|.+||+.-|+.+
T Consensus 94 Fnp~~fDa~~Wv~~ak~aGaky~vlTaKHHDGF~Lw~S~~t~~n~~~~~~~rDiv~el~~A~rk~Glk~ 162 (350)
T d1hl9a2 94 FTAEKWDPQEWADLFKKAGAKYVIPTTKHHDGFCLWGTKYTDFNSVKRGPKRDLVGDLAKAVREAGLRF 162 (350)
T ss_dssp CCCTTCCHHHHHHHHHHTTCSEEEEEEECTTCCBSSCCSSCSCBTTTSTTCSCHHHHHHHHHHHTTCEE
T ss_pred HHCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCE
T ss_conf 533348999999999986997799888834776357999999887577778745999999997449841
No 12
>d2q66a2 d.218.1.3 (A:5-201) Poly(A) polymerase, PAP, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=26.11 E-value=21 Score=15.18 Aligned_cols=27 Identities=15% Similarity=0.279 Sum_probs=19.3
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf 898988147789999999999976498
Q 537021.9.peg.8 49 PSGNPNPSDADINMTQNIITTLNPLNI 75 (97)
Q Consensus 49 PsG~~~PS~~Di~~T~~l~~a~~~l~i 75 (97)
|-....|+++|++.|..|.+.++..++
T Consensus 8 Pis~~~Pt~~d~~~s~~L~~~L~~~~~ 34 (197)
T d2q66a2 8 PVSTVGATAAENKLNDSLIQELKKEGS 34 (197)
T ss_dssp CSCCCCCCHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 854689884889989999999998089
No 13
>d1q79a2 d.218.1.3 (A:19-214) Poly(A) polymerase, PAP, N-terminal domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=22.33 E-value=25 Score=14.75 Aligned_cols=28 Identities=29% Similarity=0.591 Sum_probs=21.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf 6898988147789999999999976498
Q 537021.9.peg.8 48 HPSGNPNPSDADINMTQNIITTLNPLNI 75 (97)
Q Consensus 48 HPsG~~~PS~~Di~~T~~l~~a~~~l~i 75 (97)
.|-....|+++|++.|+.|.+.++..+.
T Consensus 6 ~PiS~~~Pt~~D~~~s~~L~~~L~~~~~ 33 (196)
T d1q79a2 6 SPISLAAPKETDCLLTQKLVETLKPFGV 33 (196)
T ss_dssp CCSCCCCCCHHHHHHHHHHHHHHGGGTC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 9751689980778999999999997489
No 14
>d2g1da1 d.12.1.3 (A:1-98) Ribosomal protein S24e {Thermoplasma acidophilum [TaxId: 2303]}
Probab=21.69 E-value=26 Score=14.67 Aligned_cols=28 Identities=25% Similarity=0.267 Sum_probs=19.2
Q ss_pred CEEEEEEECCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 6899995568989881477899999999999
Q 537021.9.peg.8 40 TSIILVHNHPSGNPNPSDADINMTQNIITTL 70 (97)
Q Consensus 40 ~~vilaHNHPsG~~~PS~~Di~~T~~l~~a~ 70 (97)
.-+++--+||+ .++||..|+. .+|.+..
T Consensus 17 rEi~~~v~h~g-~~Tpsr~ei~--~kla~~~ 44 (98)
T d2g1da1 17 KEIKYVLKFDS-SRTPSREEIK--ELIAKHE 44 (98)
T ss_dssp EEEEEEEECCT-TSCCCHHHHH--HHHHHHH
T ss_pred EEEEEEEEECC-CCCCCHHHHH--HHHHHHH
T ss_conf 89999997189-9998999999--9999997
No 15
>d1xnga1 c.26.2.1 (A:3-257) NH3-dependent NAD+-synthetase {Helicobacter pylori [TaxId: 210]}
Probab=21.27 E-value=23 Score=14.97 Aligned_cols=55 Identities=16% Similarity=0.232 Sum_probs=34.0
Q ss_pred EEEEECCCCEEEECHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEE
Q ss_conf 998540463589329999999997319689999556898988147789999999999976498899
Q 537021.9.peg.8 13 EVQSRGTIDHVPVYIREIVQRCLELSATSIILVHNHPSGNPNPSDADINMTQNIITTLNPLNIIVH 78 (97)
Q Consensus 13 e~i~~Gt~~~~~v~~r~i~~~al~~~A~~vilaHNHPsG~~~PS~~Di~~T~~l~~a~~~l~i~ll 78 (97)
-.---|++|++.+ --+.+.+...+..++. -|++...| +|..-. .+.++.+||+..
T Consensus 27 vvglSGGVDSsv~--A~L~~~a~~~~v~~v~----mp~~~~~~--~~~~~A---~~la~~lgi~~~ 81 (255)
T d1xnga1 27 VYGLSGGLDSAVV--GVLCQKVFKENAHALL----MPSSVSMP--ENKTDA---LNLCEKFSIPYT 81 (255)
T ss_dssp EEECCSSHHHHHH--HHHHHHHHGGGEEEEE----CCCSSSCH--HHHHHH---HHHHHHHTCCEE
T ss_pred EEECCCCHHHHHH--HHHHHHHHHHHCCHHC----CCCHHCCH--HHHHHH---HHHHHHHHHCCH
T ss_conf 9978798899999--9999997565121112----75121452--558999---999998540012
Done!