HHsearch alignment for GI: peg_817 and conserved domain: COG0322

>COG0322 UvrC Nuclease subunit of the excinuclease complex [DNA replication, recombination, and repair].
Probab=96.02  E-value=0.0098  Score=38.47  Aligned_cols=37  Identities=35%  Similarity=0.502  Sum_probs=34.4

Q ss_pred             HHHHHHHCCCHHHHHCCCHHHHHHCCCCCHHHHHHHHH
Q ss_conf             99999737997898509978997378988999999754
Q 537021.9.peg.8   60 AKALLKRFATLGGVFGAPLHLLQEINRIGKRVALELKL   97 (148)
Q Consensus        60 A~~lL~~fGsL~~ll~as~~eL~~i~GIG~aka~~l~a   97 (148)
T Consensus       543 ~~~LL~~Fgs~~~i~~As~eel~~v-gi~~~~a~~i~~  579 (581)
T COG0322         543 RKALLKHFGSLKGIKSASVEELAKV-GISKKLAEKIYE  579 (581)
T ss_pred             HHHHHHHHHCHHHHHHCCHHHHHHC-CCCHHHHHHHHH
T ss_conf             9999998317888885599999874-999999999985