HHsearch alignment for GI: peg_817 and conserved domain: PRK13766
>PRK13766 Hef nuclease; Provisional.
Probab=97.95 E-value=1.4e-05 Score=56.82 Aligned_cols=70 Identities=23% Similarity=0.363 Sum_probs=51.2
Q ss_pred HHHHCCHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHCCCHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 998239221898999999973379989889999999973799789850997899737898899999975499
Q 537021.9.peg.8 28 RFLQKGENALAYYEILELILFRLIPRKDTKSIAKALLKRFATLGGVFGAPLHLLQEINRIGKRVALELKLVS 99 (148)
Q Consensus 28 rll~~G~~~LsD~ELLallL~~g~~~~~~~~lA~~lL~~fGsL~~ll~as~~eL~~i~GIG~aka~~l~a~~ 99 (148)
T Consensus 689 ~~~~~~k~~~~~~e~q~~~l-~~~pgvg~-~~a~~ll~~fgsi~~i~~a~~~eL~~v~giG~~~A~~i~~~~ 758 (764)
T PRK13766 689 VSIHGEKKAMTLKEQQEYIV-SSLPDVGP-VLARNLLDHFGSVENVMTASEEELKAVEGIGEKTAKKIREVV 758 (764)
T ss_pred CCCCCCCCCCCHHHHHHHHH-HHCCCCCH-HHHHHHHHHCCCHHHHHCCCHHHHHHCCCCCHHHHHHHHHHH
T ss_conf 66677777687789999999-83899999-999999997199999965999999547496999999999985