HHsearch alignment for GI: peg_817 and conserved domain: smart00478
>smart00478 ENDO3c endonuclease III. includes endonuclease III (DNA-(apurinic or apyrimidinic site) lyase), alkylbase DNA glycosidases (Alka-family) and other DNA glycosidases
Probab=94.42 E-value=0.081 Score=32.55 Aligned_cols=95 Identities=17% Similarity=0.108 Sum_probs=64.2
Q ss_pred HHHCCHHHHHHHHHHCCC---CCCCHHHHHHHHHHHCCCHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHH--------
Q ss_conf 221898999999973379---989889999999973799789850997899737898899999975499999--------
Q 537021.9.peg.8 34 ENALAYYEILELILFRLI---PRKDTKSIAKALLKRFATLGGVFGAPLHLLQEINRIGKRVALELKLVSVAS-------- 102 (148)
Q Consensus 34 ~~~LsD~ELLallL~~g~---~~~~~~~lA~~lL~~fGsL~~ll~as~~eL~~i~GIG~aka~~l~a~~El~-------- 102 (148)
T Consensus 27 l~~a~~~~l~~~i~~~g~~~~ka~~i~~~a~~i~~~~~~~---~p~~~~~L~~lpGVG~~tA~~vl~~~-~~~~~~~vD~ 102 (149)
T smart00478 27 LAAADEEELEELIRPLGFYRRKAKYLIELARILVEEYGGE---VPDDREELLKLPGVGRKTANAVLSFA-LGKPFIPVDT 102 (149)
T ss_pred HHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC---CCCHHHHHHCCCCCCHHHHHHHHHHH-CCCCCCCCCC
T ss_conf 9868999999999986889999999999999999866555---88559998758986599999999998-7998351341
Q ss_pred --HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
Q ss_conf --9999987640677889899999999984597
Q 537021.9.peg.8 103 --QRILKANWSIKKFLTPGQPCLISVERHYPMK 133 (148)
Q Consensus 103 --rR~~~~~~~~~~~l~s~~~v~~yl~~~l~~~ 133 (148)
T Consensus 103 ~v~Rv~~R-~~~~~~~~~~~~~~~~l~~~~p~~ 134 (149)
T smart00478 103 HVLRIAKR-LGLVDKKSTPEEVEKLLEKLLPKE 134 (149)
T ss_pred CHHHHHHH-HCCCCCCCCHHHHHHHHHHHCCCC
T ss_conf 39999999-847888898999999999878934