HHsearch alignment for GI: peg_817 and conserved domain: smart00478

>smart00478 ENDO3c endonuclease III. includes endonuclease III (DNA-(apurinic or apyrimidinic site) lyase), alkylbase DNA glycosidases (Alka-family) and other DNA glycosidases

Probab=90.72  E-value=0.4  Score=28.05  Aligned_cols=53  Identities=21%  Similarity=0.250  Sum_probs=42.5

Q ss_pred             CCCCCCCHHHHHHHHHHHCCCHHHHHCCCHHHHHH-CCCCC--HHHHHHHHHHHHH
Q ss_conf             37998988999999997379978985099789973-78988--9999997549999
Q 537021.9.peg.8   49 RLIPRKDTKSIAKALLKRFATLGGVFGAPLHLLQE-INRIG--KRVALELKLVSVA  101 (148)
Q Consensus        49 ~g~~~~~~~~lA~~lL~~fGsL~~ll~as~~eL~~-i~GIG--~aka~~l~a~~El  101 (148)
T Consensus         3 qqt~~~~v~~~~~~l~~~~pt~~~l~~a~~~~l~~~i~~~g~~~~ka~~i~~~a~~   58 (149)
T smart00478        3 QQTSDEAVNKATERLFEKFPTPEDLAAADEEELEELIRPLGFYRRKAKYLIELARI   58 (149)
T ss_pred             CCCCHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf             86528999999999999885999998689999999999868899999999999999