HHsearch alignment of GI: peg_817 and MMDB domain: 1kft_A_

>1kft_A (A:) UVRC, excinuclease ABC subunit C; helix-hairpin-helix, HHH domain, DNA-binding domain, DNA binding protein; NMR {Escherichia coli}

Probab=97.62  E-value=5.9e-05  Score=52.40  Aligned_cols=40  Identities=20%  Similarity=0.246  Sum_probs=37.0

Q ss_pred             HHHHHHHHCCCHHHHHCCCHHHHHHCCCCCHHHHHHHHHH
Q ss_conf             9999997379978985099789973789889999997549
Q 537021.9.peg.8   59 IAKALLKRFATLGGVFGAPLHLLQEINRIGKRVALELKLV   98 (148)
Q Consensus        59 lA~~lL~~fGsL~~ll~as~~eL~~i~GIG~aka~~l~a~   98 (148)
                      .|+.|+++|||+.++.+|+.+||.+|+|||+.+|..|.-.
T Consensus        36 ~a~~L~~~Fgs~~~i~~As~eeL~~v~gIG~~~A~~I~~~   75 (78)
T 1kft_A           36 RRQMLLKYMGGLQGLRNASVEEIAKVPGISQGLAEKIFWS   75 (78)
T ss_dssp             HHHHHHHHHSCHHHHHHCCHHHHTTSSSTTSHHHHHHHHH
T ss_pred             HHHHHHHHCCCHHHHHHCCHHHHHHCCCCCHHHHHHHHHH
T ss_conf             9999999909989998578999973899899999999999