HHsearch alignment of GI: peg_817 and MMDB domain: 1x2i_A_1-49

>1x2i_A (A:1-49) HEF helicase/nuclease; alpha helix, helix-hairpin-helix DNA binding domain, homodimer, hydrolase; 1.45A {Pyrococcus furiosus}

Probab=91.31  E-value=0.13  Score=30.76  Aligned_cols=32  Identities=31%  Similarity=0.510  Sum_probs=25.5

Q ss_pred             CCCCCCHHHHHHHHHHHCCCHHHHHCCCHHHHH
Q ss_conf             799898899999999737997898509978997
Q 537021.9.peg.8   50 LIPRKDTKSIAKALLKRFATLGGVFGAPLHLLQ   82 (148)
Q Consensus        50 g~~~~~~~~lA~~lL~~fGsL~~ll~as~~eL~   82 (148)
                      |.|+-.. ..|+.|+++|||+.++.+||.+||+
T Consensus        18 ~I~gVG~-~~ak~Ll~~Fgsi~~i~~As~eeL~   49 (49)
T 1x2i_A           18 GLPHVSA-TLARRLLKHFGSVERVFTASVAELM   49 (49)
T ss_dssp             TSTTCCH-HHHHHHHHHHCSHHHHHHCCHHHHT
T ss_pred             CCCCCCH-HHHHHHHHHCCHHHHHHHCCHHHHH
T ss_conf             8999789-9999999970628888626798886