HHsearch results for GI: peg_817 and protein with PDBid: 1dgs_A

>1dgs_A DNA ligase; AMP complex, NAD+-dependent; HET: DNA AMP; 2.90A {Thermus filiformis} SCOP: a.60.2.2 b.40.4.6 d.142.2.2 PDB: 1v9p_A*

Probab=95.95  E-value=0.033  Score=33.68  Aligned_cols=57  Identities=23%  Similarity=0.342  Sum_probs=47.1

Q ss_pred             HHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHCCCHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf             9999973379989889999999973799789850997899737898899999975499
Q 537021.9.peg.8   42 ILELILFRLIPRKDTKSIAKALLKRFATLGGVFGAPLHLLQEINRIGKRVALELKLVS   99 (148)
Q Consensus        42 LLallL~~g~~~~~~~~lA~~lL~~fGsL~~ll~as~~eL~~i~GIG~aka~~l~a~~   99 (148)
                      +--++...|.|+.- ...|+.|...|+++..+.+++.++|..|+|||+..|..|..=+
T Consensus       503 l~r~L~aLGIp~vG-~~~ak~L~~~f~~l~~l~~as~e~L~~I~GIG~~~A~si~~~f  559 (667)
T 1dgs_A          503 LERLLYALGLPGVG-EVLARNLARRFGTMDRLLEASLEELIEVEEVGELTARAILETL  559 (667)
T ss_dssp             HHHHHHHTTCSSCC-HHHHHHHHHTTSBHHHHTTCCHHHHHTSTTCCHHHHHHHHHHH
T ss_pred             HHHHHHHCCCCCCC-HHHHHHHHHHCCCHHHHHCCCHHHHHCCCCCCHHHHHHHHHHH
T ss_conf             67777750678744-8999999887599999860799998577994899999999997