HHsearch results for GI: peg_817 and protein with PDBid: 3c1y_A
>3c1y_A DNA integrity scanning protein DISA; DNA damage, DNA repair, DNA-binding, DNA binding protein; HET: DNA 2BA; 2.10A {Thermotoga maritima} PDB: 3c1z_A* 3c21_A* 3c23_A*
Probab=97.96 E-value=2.5e-05 Score=53.86 Aligned_cols=82 Identities=13% Similarity=0.104 Sum_probs=63.0
Q ss_pred HHHHHHHCCHHHCCHHHHHHHHHHCCCCCC-CH--------------------HHHHHHHHHHCCCHHHHHCCCHHHHHH
Q ss_conf 999998239221898999999973379989-88--------------------999999997379978985099789973
Q 537021.9.peg.8 25 LRDRFLQKGENALAYYEILELILFRLIPRK-DT--------------------KSIAKALLKRFATLGGVFGAPLHLLQE 83 (148)
Q Consensus 25 ~RErll~~G~~~LsD~ELLallL~~g~~~~-~~--------------------~~lA~~lL~~fGsL~~ll~as~~eL~~ 83 (148)
..+.+-.--.+.+.|.+-++-+|++...+. ++ ..++.+|.++||+|..+++||.+||..
T Consensus 272 a~~~L~~L~~~elldl~~ia~~LGy~~~g~~~llD~~v~pRGyRiLskiprlp~~vienLV~~FgsLq~Ll~AS~EeL~e 351 (377)
T 3c1y_A 272 AQNILQDFITRREPSPISISRVLGYDVQQAAQLDDVLVSARGYRLLKTVARIPLSIGYNVVRMFKTLDQISKASVEDLKK 351 (377)
T ss_dssp HHHHHHHHHTTSCCCHHHHHHHTTCCCSCGGGGGGCBCCCCSHHHHHHTSCCCHHHHHHHHHHHCSHHHHTTCCHHHHTT
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHCCHHHHHH
T ss_conf 99999862222446768999982999878666444565741788872389997889999999846899998589988964
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78988999999754999999999987
Q 537021.9.peg.8 84 INRIGKRVALELKLVSVASQRILKAN 109 (148)
Q Consensus 84 i~GIG~aka~~l~a~~El~rR~~~~~ 109 (148)
|+|||+..|.+|+ |--+|+....
T Consensus 352 VeGIGe~RAr~Ir---eGL~Rl~e~~ 374 (377)
T 3c1y_A 352 VEGIGEKRARAIS---ESISSLKHRK 374 (377)
T ss_dssp STTCCHHHHHHHH---HHHHHHHHHH
T ss_pred CCCCCHHHHHHHH---HHHHHHHHCC
T ss_conf 5885899999999---9999987430