HHsearch results for GI: peg_817 and protein with PDBid: 3c65_A
>3c65_A Uvrabc system protein C; UVRC, endonuclease, nucleotide excision repair, DNA repair, RNAse H, cytoplasm, DNA damage, DNA excision; 1.90A {Bacillus stearothermophilus}
Probab=96.03 E-value=0.00086 Score=43.91 Aligned_cols=46 Identities=28% Similarity=0.170 Sum_probs=38.1
Q ss_pred HHHCCCCCCCHHHHHHHHHHHCCCHHHHHCCCHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 97337998988999999997379978985099789973789889999997549
Q 537021.9.peg.8 46 ILFRLIPRKDTKSIAKALLKRFATLGGVFGAPLHLLQEINRIGKRVALELKLV 98 (148)
Q Consensus 46 lL~~g~~~~~~~~lA~~lL~~fGsL~~ll~as~~eL~~i~GIG~aka~~l~a~ 98 (148)
|-+-|-.+ ++.||++|||+.++..||.+||+++ |||+..|..|...
T Consensus 178 I~GIG~~~------~~~Ll~~Fgs~~~i~~As~eeL~~v-gI~~~~A~~I~~~ 223 (226)
T 3c65_A 178 IPGVGEKR------KKALLNYFGSVKKMKEATVEELQRA-NIPRAVAEKIYEK 223 (226)
T ss_dssp -----------------------------------------------------
T ss_pred CCCCCHHH------HHHHHHHCCCHHHHHHCCHHHHHHC-CCCHHHHHHHHHH
T ss_conf 68869999------9999998189999973899999876-9999999999999