HHSEARCH alignment of GI: peg_817 and SCOP domain: d1pzna1

Alignment
>d1pzna1 a.60.4.1 (A:35-95) DNA repair protein Rad51, N-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=96.38  E-value=0.002  Score=40.02  Aligned_cols=40  Identities=25%  Similarity=0.268  Sum_probs=35.5

Q ss_pred             HHHHHHHH-HCCCHHHHHCCCHHHHHHCCCCCHHHHHHHHH
Q ss_conf             99999997-37997898509978997378988999999754
Q 537021.9.peg.8   58 SIAKALLK-RFATLGGVFGAPLHLLQEINRIGKRVALELKL   97 (148)
Q Consensus        58 ~lA~~lL~-~fGsL~~ll~as~~eL~~i~GIG~aka~~l~a   97 (148)
                      ..|+.|++ .|+|+..|.+|++++|.+|+|||+.+|..|..
T Consensus        12 ~~a~~L~~~g~~sv~~l~~a~~~eL~~i~Gi~~~~A~~i~~   52 (61)
T d1pzna1          12 ATAEKLREAGYDTLEAIAVASPIELKEVAGISEGTALKIIQ   52 (61)
T ss_dssp             HHHHHHHTTTCCSHHHHHTCCHHHHHHHHCCCHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCHHHHHHCCHHHHHHCCCCCHHHHHHHHH
T ss_conf             99999999449999999859999997779999999999999


SCOP domain information

class: All alpha proteins
fold: SAM domain-like
superfamily: Rad51 N-terminal domain-like
family: DNA repair protein Rad51, N-terminal domain
domain: DNA repair protein Rad51, N-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]