HHSEARCH alignment of GI: peg_817 and SCOP domain: d2abka_

Alignment

Probab=92.29  E-value=0.052  Score=30.84  Aligned_cols=64  Identities=11%  Similarity=0.070  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHCCCHHHHHH-CCCCCH--HHHHHHHHHHHHH
Q ss_conf             899999997337998988999999997379978985099789973-789889--9999975499999
Q 537021.9.peg.8   39 YYEILELILFRLIPRKDTKSIAKALLKRFATLGGVFGAPLHLLQE-INRIGK--RVALELKLVSVAS  102 (148)
Q Consensus        39 D~ELLallL~~g~~~~~~~~lA~~lL~~fGsL~~ll~as~~eL~~-i~GIG~--aka~~l~a~~El~  102 (148)
                      -.-|++.+|..-++..+|....++|.++|++...+..|+.+++.+ |+|+|-  .||..|+.+.+..
T Consensus        30 ~~vli~~iLsqqT~~~~v~~~~~~l~~~~~t~~~la~a~~~~l~~~i~~~G~y~~Ka~~l~~~a~~i   96 (211)
T d2abka_          30 FELLIAVLLSAQATDVSVNKATAKLYPVANTPAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRIL   96 (211)
T ss_dssp             HHHHHHHHHTTTSCHHHHHHHHHHHTTTCCSHHHHHHHHHHHHHHHHTTSTTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999995626399999999988874147278876557676777777544115788999998889

SCOP domain information

class: All alpha proteins
fold: DNA-glycosylase
superfamily: DNA-glycosylase
family: Endonuclease III
domain: Endonuclease III
species: Escherichia coli [TaxId: 562]