Query 537021.9.peg.818_1
Match_columns 44
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 13730
Date Wed May 25 01:22:47 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_818.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ufwa_ d.58.7.1 (A:) Synaptoj 9.6 72 0.0052 13.9 2.0 23 22-44 36-58 (95)
2 d1tf3a3 g.37.1.1 (A:71-101) Tr 8.6 58 0.0042 14.3 1.1 24 14-37 7-30 (31)
3 d1e6va2 d.58.31.2 (A:8-272) Al 7.4 55 0.004 14.5 0.6 23 6-28 160-183 (265)
4 d1w3ex1 d.79.3.1 (X:1-98) Euka 7.2 63 0.0046 14.1 0.8 27 13-42 37-63 (98)
5 d1hbna2 d.58.31.2 (A:2-269) Al 6.2 58 0.0042 14.3 0.2 23 6-28 163-186 (268)
6 d1tf3a1 g.37.1.1 (A:1-40) Tran 5.7 84 0.0061 13.6 0.8 20 15-34 9-28 (31)
7 d1dsva_ g.40.1.1 (A:) Nucleic 5.5 77 0.0056 13.7 0.5 20 9-28 10-29 (31)
8 d1e6ya2 d.58.31.2 (A:1002-1283 5.1 89 0.0064 13.5 0.6 23 6-28 177-200 (282)
9 d1cl4a_ g.40.1.1 (A:) Nucleoca 4.7 79 0.0057 13.7 0.1 20 9-28 10-29 (32)
10 d2vxfa1 b.38.1.5 (A:6-85) LSM1 4.2 1.4E+02 0.01 12.4 1.1 12 4-15 58-69 (80)
No 1
>d1ufwa_ d.58.7.1 (A:) Synaptojanin 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.63 E-value=72 Score=13.89 Aligned_cols=23 Identities=26% Similarity=0.551 Sum_probs=19.2
Q ss_pred EECCCHHHHHHHHCCCCEEEEEC
Q ss_conf 22430677654105860231419
Q 537021.9.peg.8 22 SLNGNLLKGLCSFGNLPIVKFIE 44 (44)
Q Consensus 22 slngnllkglcsfgnlpivkfie 44 (44)
++--.|+..+-+||..-.|+|++
T Consensus 36 ~l~~~Llq~l~~~GeViLvRFv~ 58 (95)
T d1ufwa_ 36 DLRTELMQTLGSYGTIVLVRINQ 58 (95)
T ss_dssp HHHHHHHHHHHHHSCCSEEEEET
T ss_pred HHHHHHHHHHHHCCEEEEEEEEC
T ss_conf 99999999986378199999958
No 2
>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}
Probab=8.62 E-value=58 Score=14.34 Aligned_cols=24 Identities=29% Similarity=0.660 Sum_probs=21.0
Q ss_pred CCCCCCEEEECCCHHHHHHHHCCC
Q ss_conf 322231012243067765410586
Q 537021.9.peg.8 14 ADDCDAQYSLNGNLLKGLCSFGNL 37 (44)
Q Consensus 14 addcdaqyslngnllkglcsfgnl 37 (44)
.|.||-.+.-..|.-|-.-.|-|+
T Consensus 7 sd~cdl~fttkanmkkhfnrfhn~ 30 (31)
T d1tf3a3 7 SDGCDLRFTTKANMKKHFNRFHNI 30 (31)
T ss_dssp SSSCCCEESSHHHHHHHHHHHTTT
T ss_pred CCCCCEEEEEHHHHHHHHHHHCCC
T ss_conf 888523886267789888665047
No 3
>d1e6va2 d.58.31.2 (A:8-272) Alpha chain {Archaeon Methanopyrus kandleri [TaxId: 2320]}
Probab=7.39 E-value=55 Score=14.45 Aligned_cols=23 Identities=26% Similarity=0.527 Sum_probs=17.8
Q ss_pred EEECCC-CCCCCCCCEEEECCCHH
Q ss_conf 986077-43322231012243067
Q 537021.9.peg.8 6 LLFEGS-DLADDCDAQYSLNGNLL 28 (44)
Q Consensus 6 llfegs-dladdcdaqyslngnll 28 (44)
-+|.|. +|||+-|.||-+|-|-+
T Consensus 160 KiFTGddelADeid~~~~idInK~ 183 (265)
T d1e6va2 160 KIITGDLELADEIDDKFLIDIEKL 183 (265)
T ss_dssp EEEESCHHHHTTSCGGGBCCHHHH
T ss_pred EEECCCHHHHHHHHHHEEEEHHHH
T ss_conf 664187777765311307506644
No 4
>d1w3ex1 d.79.3.1 (X:1-98) Eukaryotic ribosomal protein L30 (L30e) {Archaeon Thermococcus celer [TaxId: 2264]}
Probab=7.18 E-value=63 Score=14.15 Aligned_cols=27 Identities=7% Similarity=0.236 Sum_probs=18.3
Q ss_pred CCCCCCCEEEECCCHHHHHHHHCCCCEEEE
Q ss_conf 332223101224306776541058602314
Q 537021.9.peg.8 13 LADDCDAQYSLNGNLLKGLCSFGNLPIVKF 42 (44)
Q Consensus 13 laddcdaqyslngnllkglcsfgnlpivkf 42 (44)
+|.||+..+ -.-+..+|...|.|++.|
T Consensus 37 lA~D~~~~~---~~~i~~~c~~~~Ip~~~~ 63 (98)
T d1w3ex1 37 VARNARPDI---KEDIEYYARLSGIAVYEF 63 (98)
T ss_dssp EETTSCHHH---HHHHHHHHHHHTCEEEEE
T ss_pred EECCCCHHH---HHHHHHHHHHCCCCEEEE
T ss_conf 979999899---999999998469995997
No 5
>d1hbna2 d.58.31.2 (A:2-269) Alpha chain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=6.18 E-value=58 Score=14.33 Aligned_cols=23 Identities=26% Similarity=0.549 Sum_probs=17.5
Q ss_pred EEECCC-CCCCCCCCEEEECCCHH
Q ss_conf 986077-43322231012243067
Q 537021.9.peg.8 6 LLFEGS-DLADDCDAQYSLNGNLL 28 (44)
Q Consensus 6 llfegs-dladdcdaqyslngnll 28 (44)
-+|.|. +|||+-|.||-+|-|-+
T Consensus 163 KiFTGddelADeid~~f~idInK~ 186 (268)
T d1hbna2 163 KVFTGNDEIADEIDPAFVIDINKQ 186 (268)
T ss_dssp EEEESCHHHHHHSCGGGBCCHHHH
T ss_pred EEECCCHHHHHHHHHHEEEEHHHH
T ss_conf 664187777765311307506544
No 6
>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}
Probab=5.70 E-value=84 Score=13.56 Aligned_cols=20 Identities=35% Similarity=0.502 Sum_probs=16.5
Q ss_pred CCCCCEEEECCCHHHHHHHH
Q ss_conf 22231012243067765410
Q 537021.9.peg.8 15 DDCDAQYSLNGNLLKGLCSF 34 (44)
Q Consensus 15 ddcdaqyslngnllkglcsf 34 (44)
.||.|.|+-+-.|-.-||.-
T Consensus 9 ~dC~A~ynk~wkL~AHLckH 28 (31)
T d1tf3a1 9 ADCGAAYNKNWKLQAHLSKH 28 (31)
T ss_dssp GGGCCEESSHHHHHHHHHHH
T ss_pred CCCCHHHCCCHHHHHHHHHH
T ss_conf 77444344022156786600
No 7
>d1dsva_ g.40.1.1 (A:) Nucleic acid binding protein p14 {Mouse mammary tumor virus [TaxId: 11757]}
Probab=5.52 E-value=77 Score=13.75 Aligned_cols=20 Identities=25% Similarity=0.680 Sum_probs=16.1
Q ss_pred CCCCCCCCCCCEEEECCCHH
Q ss_conf 07743322231012243067
Q 537021.9.peg.8 9 EGSDLADDCDAQYSLNGNLL 28 (44)
Q Consensus 9 egsdladdcdaqyslngnll 28 (44)
.|-..|.||......||+-|
T Consensus 10 kG~HWa~~Crsk~~~~G~pl 29 (31)
T d1dsva_ 10 KGYHWKSECKSKFDKDGNPL 29 (31)
T ss_dssp SSBSCTTTCCCSEEGGGEEC
T ss_pred CCCHHHHHHHHHHCCCCCCC
T ss_conf 75557877546545587978
No 8
>d1e6ya2 d.58.31.2 (A:1002-1283) Alpha chain {Archaeon Methanosarcina barkeri [TaxId: 2208]}
Probab=5.09 E-value=89 Score=13.45 Aligned_cols=23 Identities=35% Similarity=0.515 Sum_probs=17.4
Q ss_pred EEECCC-CCCCCCCCEEEECCCHH
Q ss_conf 986077-43322231012243067
Q 537021.9.peg.8 6 LLFEGS-DLADDCDAQYSLNGNLL 28 (44)
Q Consensus 6 llfegs-dladdcdaqyslngnll 28 (44)
-+|.|. +|||+-|.||-++-|-+
T Consensus 177 kvFTGddelADeid~~f~idInk~ 200 (282)
T d1e6ya2 177 KVFTGDDALADEIDKQFLIDINKE 200 (282)
T ss_dssp EEEESCHHHHTTSCGGGBCCHHHH
T ss_pred EEECCCHHHHHHHHHHHEEEHHHH
T ss_conf 664187777765312316406644
No 9
>d1cl4a_ g.40.1.1 (A:) Nucleocapsid protein from mason-pfizer monkey virus (MPMV) {Mason-pfizer monkey virus [TaxId: 11855]}
Probab=4.66 E-value=79 Score=13.70 Aligned_cols=20 Identities=25% Similarity=0.599 Sum_probs=16.0
Q ss_pred CCCCCCCCCCCEEEECCCHH
Q ss_conf 07743322231012243067
Q 537021.9.peg.8 9 EGSDLADDCDAQYSLNGNLL 28 (44)
Q Consensus 9 egsdladdcdaqyslngnll 28 (44)
.|-..|.||..+...||+-|
T Consensus 10 kG~HWa~~Crsk~~~~G~pl 29 (32)
T d1cl4a_ 10 RGKHWANECKSKTDNQGNPI 29 (32)
T ss_dssp SCSSCSTTCCCTTSSSSCCC
T ss_pred CCCHHHHHHHHHHCCCCCCC
T ss_conf 75567877556545587838
No 10
>d2vxfa1 b.38.1.5 (A:6-85) LSM14 homolog A (Lsm14a) {Zebrafish (Danio rerio) [TaxId: 7955]}
Probab=4.25 E-value=1.4e+02 Score=12.43 Aligned_cols=12 Identities=42% Similarity=1.085 Sum_probs=8.4
Q ss_pred EEEEECCCCCCC
Q ss_conf 799860774332
Q 537021.9.peg.8 4 HFLLFEGSDLAD 15 (44)
Q Consensus 4 hfllfegsdlad 15 (44)
.+..|.|||..|
T Consensus 58 ~~IvFrgsDIKd 69 (80)
T d2vxfa1 58 EYIIFRGSDIKD 69 (80)
T ss_dssp EEEEEETTTEEE
T ss_pred EEEEECCCCCCE
T ss_conf 689995767406
Done!