RPS-BLAST 2.2.22 [Sep-27-2009] Database: pdb70 24,244 sequences; 5,693,230 total letters Searching..................................................done Query= 537021.9.peg.818_1 (44 letters) >1qi9_A Protein (vanadium bromoperoxidase); haloperoxidase, oxidoreductase; 2.05A {Ascophyllum nodosum} SCOP: a.111.1.2 Length = 556 Score = 26.4 bits (58), Expect = 1.6 Identities = 9/34 (26%), Positives = 14/34 (41%) Query: 2 PMHFLLFEGSDLADDCDAQYSLNGNLLKGLCSFG 35 F LF G + D ++++G GL G Sbjct: 518 TFEFRLFTGEVIKLFQDGTFTIDGFKCPGLVYTG 551 Database: pdb70 Posted date: Jan 26, 2011 11:21 AM Number of letters in database: 5,693,230 Number of sequences in database: 24,244 Lambda K H 0.326 0.146 0.459 Gapped Lambda K H 0.267 0.0594 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 24244 Number of Hits to DB: 363,939 Number of extensions: 9514 Number of successful extensions: 43 Number of sequences better than 10.0: 1 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 2 Length of query: 44 Length of database: 5,693,230 Length adjustment: 17 Effective length of query: 27 Effective length of database: 5,281,082 Effective search space: 142589214 Effective search space used: 142589214 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 50 (23.3 bits)