RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= 537021.9.peg.818_1
         (44 letters)



>d1qi9a_ a.111.1.2 (A:) Haloperoxidase (bromoperoxidase)
           {Ascophyllum nodosum [TaxId: 52969]}
          Length = 555

 Score = 22.9 bits (49), Expect = 8.1
 Identities = 9/33 (27%), Positives = 14/33 (42%)

Query: 3   MHFLLFEGSDLADDCDAQYSLNGNLLKGLCSFG 35
             F LF G  +    D  ++++G    GL   G
Sbjct: 518 FEFRLFTGEVIKLFQDGTFTIDGFKCPGLVYTG 550


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.326    0.146    0.459 

Gapped
Lambda     K      H
   0.267   0.0428    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 159,294
Number of extensions: 4199
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 3
Length of query: 44
Length of database: 2,407,596
Length adjustment: 16
Effective length of query: 28
Effective length of database: 2,187,916
Effective search space: 61261648
Effective search space used: 61261648
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 47 (22.7 bits)