Query 537021.9.peg.82_1
Match_columns 41
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 13730
Date Mon May 23 12:11:29 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_82.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2e50a1 d.305.1.1 (A:1-222) Pr 7.3 54 0.004 14.1 0.5 15 22-36 65-79 (222)
2 d2f05a1 a.59.1.1 (A:1-85) Sin3 4.1 81 0.0059 13.3 -0.2 27 15-41 56-82 (85)
3 d2ayua1 d.305.1.1 (A:70-370) N 3.6 1.5E+02 0.011 12.0 0.8 14 22-35 60-73 (301)
4 d1s5qb_ a.59.1.1 (B:) Sin3A {M 3.5 1E+02 0.0073 12.8 -0.2 28 14-41 61-88 (89)
5 d1v7ca_ c.79.1.1 (A:) Threonin 3.1 1.3E+02 0.0098 12.2 0.2 23 3-25 7-32 (351)
6 d2qalr1 a.4.8.1 (R:19-73) Ribo 3.0 1.7E+02 0.012 11.7 0.5 12 4-15 3-14 (55)
7 d2glia5 g.37.1.1 (A:229-257) F 2.9 1.8E+02 0.013 11.5 0.7 17 3-19 12-28 (29)
8 d1iyra_ a.164.1.1 (A:) C-termi 2.6 1.7E+02 0.013 11.6 0.3 21 4-24 25-45 (83)
9 d1gjja1 a.140.1.1 (A:1-50) Thy 2.2 1.6E+02 0.011 11.9 -0.4 25 1-25 1-28 (50)
10 d2alaa2 f.10.1.1 (A:1-292) Fus 2.1 1E+02 0.0075 12.7 -1.5 17 18-34 148-164 (292)
No 1
>d2e50a1 d.305.1.1 (A:1-222) Protein SET {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.33 E-value=54 Score=14.08 Aligned_cols=15 Identities=40% Similarity=0.738 Sum_probs=12.1
Q ss_pred CCCHHHHHHHHHHHH
Q ss_conf 730223467885157
Q 537021.9.peg.8 22 TPLLSKRTEVITGIN 36 (41)
Q Consensus 22 tpllskrtevitgin 36 (41)
.|++.+|-++|.||-
T Consensus 65 ~ply~~R~~iI~gIP 79 (222)
T d2e50a1 65 QPFFQKRSELIAKIP 79 (222)
T ss_dssp HHHHHHHHHHHTTST
T ss_pred HHHHHHHHHHHCCCC
T ss_conf 669999877751476
No 2
>d2f05a1 a.59.1.1 (A:1-85) Sin3B {Mouse (Mus musculus) [TaxId: 10090]}
Probab=4.11 E-value=81 Score=13.25 Aligned_cols=27 Identities=19% Similarity=0.452 Sum_probs=20.8
Q ss_pred HHHHCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 122148773022346788515752679
Q 537021.9.peg.8 15 TEVINGETPLLSKRTEVITGINRVMPE 41 (41)
Q Consensus 15 tevingetpllskrtevitginrvmpe 41 (41)
.||+.--..|+....+.|.|.|.-+|+
T Consensus 56 ~ev~~~V~~Lf~~hpdLl~~F~~FLP~ 82 (85)
T d2f05a1 56 EEVFTEVANLFRGQEDLLSEFGQFLPE 82 (85)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHSCG
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHCCC
T ss_conf 999999999984488999999977846
No 3
>d2ayua1 d.305.1.1 (A:70-370) Nucleosome assembly protein, NAP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=3.64 E-value=1.5e+02 Score=12.01 Aligned_cols=14 Identities=29% Similarity=0.748 Sum_probs=9.0
Q ss_pred CCCHHHHHHHHHHH
Q ss_conf 73022346788515
Q 537021.9.peg.8 22 TPLLSKRTEVITGI 35 (41)
Q Consensus 22 tpllskrtevitgi 35 (41)
-||..+|.++|+|.
T Consensus 60 ~ply~kR~~II~G~ 73 (301)
T d2ayua1 60 KPIWEQRSRIISGQ 73 (301)
T ss_dssp HHHHHHHHHHHHTS
T ss_pred CHHHHHHHHHHCCC
T ss_conf 85999999997799
No 4
>d1s5qb_ a.59.1.1 (B:) Sin3A {Mouse (Mus musculus) [TaxId: 10090]}
Probab=3.49 E-value=1e+02 Score=12.80 Aligned_cols=28 Identities=14% Similarity=0.434 Sum_probs=22.2
Q ss_pred HHHHHCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 1122148773022346788515752679
Q 537021.9.peg.8 14 KTEVINGETPLLSKRTEVITGINRVMPE 41 (41)
Q Consensus 14 ktevingetpllskrtevitginrvmpe 41 (41)
..+|+.--..|+....+.|.|.|.-+||
T Consensus 61 ~~~v~~rV~~Lf~~hpdLi~~Fn~FLPe 88 (89)
T d1s5qb_ 61 EQEVYAQVARLFKNQEDLLSEFGQFLPD 88 (89)
T ss_dssp HHHHHHHHHHHSCSCHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHCCC
T ss_conf 9999999999985487999989966879
No 5
>d1v7ca_ c.79.1.1 (A:) Threonine synthase {Thermus thermophilus [TaxId: 274]}
Probab=3.15 E-value=1.3e+02 Score=12.18 Aligned_cols=23 Identities=52% Similarity=0.837 Sum_probs=14.1
Q ss_pred CCHHHHHHHHHHHHHHC---CCCCCH
Q ss_conf 10100244432112214---877302
Q 537021.9.peg.8 3 QRYRDTSLLSKKTEVIN---GETPLL 25 (41)
Q Consensus 3 qryrdtsllskktevin---getpll 25 (41)
.|||+---...++..|. |.|||+
T Consensus 7 ~~~~~~lp~~~~~~~i~~~~gnTPLv 32 (351)
T d1v7ca_ 7 ERYRNLLPVSEKTPVISLLEGSTPLI 32 (351)
T ss_dssp HHTGGGSSCCTTSCCCCSCCCCCCEE
T ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCE
T ss_conf 99998789988888543687989876
No 6
>d2qalr1 a.4.8.1 (R:19-73) Ribosomal protein S18 {Escherichia coli [TaxId: 562]}
Probab=2.99 E-value=1.7e+02 Score=11.71 Aligned_cols=12 Identities=25% Similarity=0.454 Sum_probs=9.1
Q ss_pred CHHHHHHHHHHH
Q ss_conf 010024443211
Q 537021.9.peg.8 4 RYRDTSLLSKKT 15 (41)
Q Consensus 4 ryrdtsllskkt 15 (41)
-|+|.++|++-.
T Consensus 3 DYKn~~lL~~Fi 14 (55)
T d2qalr1 3 DYKDIATLKNYI 14 (55)
T ss_dssp CSSCHHHHGGGB
T ss_pred CCCCHHHHHHHC
T ss_conf 833689999876
No 7
>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.92 E-value=1.8e+02 Score=11.54 Aligned_cols=17 Identities=35% Similarity=0.624 Sum_probs=11.8
Q ss_pred CCHHHHHHHHHHHHHHC
Q ss_conf 10100244432112214
Q 537021.9.peg.8 3 QRYRDTSLLSKKTEVIN 19 (41)
Q Consensus 3 qryrdtsllskktevin 19 (41)
.+|-|.|-|-|..+-..
T Consensus 12 K~YtdPSSLRKH~k~~H 28 (29)
T d2glia5 12 KRYTDPSSLRKHVKTVH 28 (29)
T ss_dssp CEESSHHHHHHHHHHSC
T ss_pred CCCCCHHHHHHHHHHHC
T ss_conf 66578899999878517
No 8
>d1iyra_ a.164.1.1 (A:) C-terminal domain of DFF45/ICAD (DFF-C domain) {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.64 E-value=1.7e+02 Score=11.64 Aligned_cols=21 Identities=29% Similarity=0.379 Sum_probs=15.1
Q ss_pred CHHHHHHHHHHHHHHCCCCCC
Q ss_conf 010024443211221487730
Q 537021.9.peg.8 4 RYRDTSLLSKKTEVINGETPL 24 (41)
Q Consensus 4 ryrdtsllskktevingetpl 24 (41)
++-.+||-|+.-|.+++|.|-
T Consensus 25 ~aPElsLSsQdLElV~ke~~~ 45 (83)
T d1iyra_ 25 QAPELSLSSQDLELVTKEDPK 45 (83)
T ss_dssp CCTTTTSCHHHHHHHHTSCHH
T ss_pred CCCCCCCCHHHHHHHHCCCHH
T ss_conf 995335547879999713889
No 9
>d1gjja1 a.140.1.1 (A:1-50) Thymopoietin, LAP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.23 E-value=1.6e+02 Score=11.86 Aligned_cols=25 Identities=36% Similarity=0.591 Sum_probs=16.5
Q ss_pred CCCCHHHHHHHHH---HHHHHCCCCCCH
Q ss_conf 9610100244432---112214877302
Q 537021.9.peg.8 1 MPQRYRDTSLLSK---KTEVINGETPLL 25 (41)
Q Consensus 1 mpqryrdtsllsk---ktevingetpll 25 (41)
||+-..|.|.|+| |.|.+....+|-
T Consensus 1 mpefledPsvltKdkLKseL~annV~LP 28 (50)
T d1gjja1 1 MPEFLEDPSVLTKDKLKSELVANNVTLP 28 (50)
T ss_dssp CCCCCSCBEEECHHHHHHHHHHTTCCCC
T ss_pred CCHHHCCHHHHHHHHHHHHHHHCCCCCC
T ss_conf 9202117247719999999998488789
No 10
>d2alaa2 f.10.1.1 (A:1-292) Fusion glycoprotein E1 {Semliki forest virus [TaxId: 11033]}
Probab=2.14 E-value=1e+02 Score=12.74 Aligned_cols=17 Identities=29% Similarity=0.501 Sum_probs=0.0
Q ss_pred HCCCCCCHHHHHHHHHH
Q ss_conf 14877302234678851
Q 537021.9.peg.8 18 INGETPLLSKRTEVITG 34 (41)
Q Consensus 18 ingetpllskrtevitg 34 (41)
.|||||.-++...+|.|
T Consensus 148 VNG~t~~~~~~~k~i~G 164 (292)
T d2alaa2 148 VNGDHAVTIGGTQFIFG 164 (292)
T ss_dssp CSSSCCEEETTEEEEEC
T ss_pred ECCCCCCCCCCEEEEEC
T ss_conf 74755521376069942
Done!