Query 537021.9.peg.834_1
Match_columns 42
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 13730
Date Wed May 25 00:30:56 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_834.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1qmya_ d.3.1.2 (A:) FMDV lead 10.2 46 0.0034 14.3 1.2 14 7-20 28-41 (156)
2 d2nmla1 d.330.1.1 (A:2-101) En 6.7 85 0.0062 13.0 1.2 10 6-15 52-61 (100)
3 d3nula_ d.110.1.1 (A:) Profili 3.6 1.5E+02 0.011 11.8 1.9 18 19-36 113-130 (130)
4 d1oxja2 a.118.1.13 (A:656-763) 1.8 2.7E+02 0.02 10.5 2.1 21 15-35 46-66 (108)
5 d2nyga1 c.140.1.2 (A:2-271) Un 1.8 2.6E+02 0.019 10.6 0.2 18 22-39 109-127 (270)
6 d1uv7a_ d.67.4.1 (A:) General 1.6 2.6E+02 0.019 10.6 -0.1 18 3-20 33-50 (80)
7 d2jxca1 a.39.1.6 (A:121-215) E 1.5 3.2E+02 0.023 10.2 0.9 16 5-21 10-25 (95)
8 d1acfa_ d.110.1.1 (A:) Profili 1.3 3.4E+02 0.025 10.0 1.8 20 17-36 106-125 (125)
9 d1j2jb_ a.7.8.1 (B:) ADP-ribos 1.3 3.5E+02 0.026 10.0 0.5 7 33-39 26-32 (41)
10 d2zjr41 g.42.1.1 (4:1-37) Ribo 1.3 2.2E+02 0.016 11.0 -1.1 6 17-22 30-35 (37)
No 1
>d1qmya_ d.3.1.2 (A:) FMDV leader protease {Foot-and-mouth disease virus [TaxId: 12110]}
Probab=10.23 E-value=46 Score=14.35 Aligned_cols=14 Identities=36% Similarity=0.638 Sum_probs=11.4
Q ss_pred HHHHHHHHCCCHHH
Q ss_conf 99999985063036
Q 537021.9.peg.8 7 FSQLFTYLDIPRHK 20 (42)
Q Consensus 7 fsqlftyldiprhk 20 (42)
.-|||.|+|+|--+
T Consensus 28 ilQLfryv~epfFd 41 (156)
T d1qmya_ 28 ILQLFRYVEEPFFD 41 (156)
T ss_dssp HHHHHHHHTCCTTH
T ss_pred HHHHHHHCCCCCHH
T ss_conf 99999871753112
No 2
>d2nmla1 d.330.1.1 (A:2-101) Enhancer of rudimentary homolog, ERH {Mouse (Mus musculus) [TaxId: 10090]}
Probab=6.66 E-value=85 Score=13.04 Aligned_cols=10 Identities=50% Similarity=1.056 Sum_probs=8.1
Q ss_pred CHHHHHHHHC
Q ss_conf 0999999850
Q 537021.9.peg.8 6 NFSQLFTYLD 15 (42)
Q Consensus 6 nfsqlftyld 15 (42)
+.+|||.|+|
T Consensus 52 di~~Lf~FID 61 (100)
T d2nmla1 52 DISQLFDFID 61 (100)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
T ss_conf 4999999987
No 3
>d3nula_ d.110.1.1 (A:) Profilin (actin-binding protein) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=3.63 E-value=1.5e+02 Score=11.75 Aligned_cols=18 Identities=22% Similarity=0.416 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHHHHHH
Q ss_conf 366999999999863456
Q 537021.9.peg.8 19 HKYRIMGILAEYLIANSF 36 (42)
Q Consensus 19 hkyrimgilaeyliansf 36 (42)
.-...+.-||+||+.+.|
T Consensus 113 ~~~~~ve~LadYL~~~g~ 130 (130)
T d3nula_ 113 QCNLVVERLGDYLIESEL 130 (130)
T ss_dssp HHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHCCC
T ss_conf 999999999999997589
No 4
>d1oxja2 a.118.1.13 (A:656-763) RNA-binding protein Smaug {Drosophila melanogaster [TaxId: 7227]}
Probab=1.80 E-value=2.7e+02 Score=10.53 Aligned_cols=21 Identities=14% Similarity=0.287 Sum_probs=16.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHH
Q ss_conf 063036699999999986345
Q 537021.9.peg.8 15 DIPRHKYRIMGILAEYLIANS 35 (42)
Q Consensus 15 diprhkyrimgilaeylians 35 (42)
|||-.--|.||.....|+.+.
T Consensus 46 Dip~qFtkVmgkvctqL~~~~ 66 (108)
T d1oxja2 46 NIGLRFLKVIDIVTNTLQQDP 66 (108)
T ss_dssp CHHHHHHHHHHHHHHHHHTCT
T ss_pred CCHHHHHHHHHHHHHHHHHCC
T ss_conf 314999999999999984324
No 5
>d2nyga1 c.140.1.2 (A:2-271) Uncharacterized protein YokD {Bacillus subtilis [TaxId: 1423]}
Probab=1.80 E-value=2.6e+02 Score=10.62 Aligned_cols=18 Identities=28% Similarity=0.337 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHH-HHHHC
Q ss_conf 9999999998634-56530
Q 537021.9.peg.8 22 RIMGILAEYLIAN-SFIKS 39 (42)
Q Consensus 22 rimgilaeylian-sfiks 39 (42)
+-||+|+||+... .++.|
T Consensus 109 ~~mG~l~e~~r~~~~~~RS 127 (270)
T d2nyga1 109 RGMGQIVELFRSYPEVKRS 127 (270)
T ss_dssp GGGCHHHHHHTTSTTCEEC
T ss_pred CCCCHHHHHHHHCCCCEEC
T ss_conf 2007689999877797514
No 6
>d1uv7a_ d.67.4.1 (A:) General secretion pathway protein M, EpsM {Vibrio cholerae [TaxId: 666]}
Probab=1.65 E-value=2.6e+02 Score=10.63 Aligned_cols=18 Identities=22% Similarity=0.421 Sum_probs=12.5
Q ss_pred CCCCHHHHHHHHCCCHHH
Q ss_conf 641099999985063036
Q 537021.9.peg.8 3 DNKNFSQLFTYLDIPRHK 20 (42)
Q Consensus 3 dnknfsqlftyldiprhk 20 (42)
|+-.|.+|..+|+--..+
T Consensus 33 d~v~F~~ll~WL~~L~~~ 50 (80)
T d1uv7a_ 33 QPLPFSQLVSWIAYLQER 50 (80)
T ss_dssp CCBCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHC
T ss_conf 687989999999999761
No 7
>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]}
Probab=1.46 E-value=3.2e+02 Score=10.17 Aligned_cols=16 Identities=19% Similarity=0.605 Sum_probs=10.2
Q ss_pred CCHHHHHHHHCCCHHHH
Q ss_conf 10999999850630366
Q 537021.9.peg.8 5 KNFSQLFTYLDIPRHKY 21 (42)
Q Consensus 5 knfsqlftyldiprhky 21 (42)
..|.++|..+| .++.+
T Consensus 10 ~~y~~~F~~~D-~~~G~ 25 (95)
T d2jxca1 10 AKYDAIFDSLS-PVNGF 25 (95)
T ss_dssp HHHHHHHHHTC-CBTTE
T ss_pred HHHHHHHHHHC-CCCCC
T ss_conf 99999999818-99993
No 8
>d1acfa_ d.110.1.1 (A:) Profilin (actin-binding protein) {Acanthamoeba castellanii [TaxId: 5755]}
Probab=1.34 E-value=3.4e+02 Score=10.02 Aligned_cols=20 Identities=35% Similarity=0.655 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHHHHHHHHH
Q ss_conf 30366999999999863456
Q 537021.9.peg.8 17 PRHKYRIMGILAEYLIANSF 36 (42)
Q Consensus 17 prhkyrimgilaeyliansf 36 (42)
|..-...+.-||+||+.+.|
T Consensus 106 ~~~~~~~v~~ladYL~~~GY 125 (125)
T d1acfa_ 106 PGTAANVVEKLADYLIGQGF 125 (125)
T ss_dssp HHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHHCCC
T ss_conf 88999999999999997689
No 9
>d1j2jb_ a.7.8.1 (B:) ADP-ribosylation factor binding protein Gga1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=1.31 E-value=3.5e+02 Score=9.98 Aligned_cols=7 Identities=57% Similarity=0.748 Sum_probs=0.0
Q ss_pred HHHHHHC
Q ss_conf 3456530
Q 537021.9.peg.8 33 ANSFIKS 39 (42)
Q Consensus 33 ansfiks 39 (42)
||..|||
T Consensus 26 ANrLIK~ 32 (41)
T d1j2jb_ 26 ANKLIKE 32 (41)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
T ss_conf 9999999
No 10
>d2zjr41 g.42.1.1 (4:1-37) Ribosomal protein L36 {Deinococcus radiodurans [TaxId: 1299]}
Probab=1.30 E-value=2.2e+02 Score=10.99 Aligned_cols=6 Identities=50% Similarity=0.728 Sum_probs=0.0
Q ss_pred CHHHHH
Q ss_conf 303669
Q 537021.9.peg.8 17 PRHKYR 22 (42)
Q Consensus 17 prhkyr 22 (42)
|+||-|
T Consensus 30 pkHKQR 35 (37)
T d2zjr41 30 VKHKQR 35 (37)
T ss_dssp STTCEE
T ss_pred CCCCCC
T ss_conf 974334
Done!