RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddB 
           21,608 sequences; 5,994,473 total letters

Searching..................................................done

Query= 537021.9.peg.869_1
         (39 letters)



>gnl|CDD|178103 PLN02485, PLN02485, oxidoreductase.
          Length = 329

 Score = 24.3 bits (53), Expect = 6.7
 Identities = 8/24 (33%), Positives = 12/24 (50%), Gaps = 1/24 (4%)

Query: 7   ACDCYRQIEDILQGKIAKCPVRGL 30
           A DCYR+ +    G + K  + G 
Sbjct: 109 AIDCYREFKPGKYGDLGK-VMEGP 131


  Database: CddB
    Posted date:  Feb 4, 2011  9:54 PM
  Number of letters in database: 5,994,473
  Number of sequences in database:  21,608
  
Lambda     K      H
   0.325    0.142    0.433 

Gapped
Lambda     K      H
   0.267   0.0704    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21608
Number of Hits to DB: 572,539
Number of extensions: 17416
Number of successful extensions: 58
Number of sequences better than 10.0: 1
Number of HSP's gapped: 58
Number of HSP's successfully gapped: 3
Length of query: 39
Length of database: 5,994,473
Length adjustment: 13
Effective length of query: 26
Effective length of database: 5,713,569
Effective search space: 148552794
Effective search space used: 148552794
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 50 (23.1 bits)