Query 537021.9.peg.873_1 Match_columns 41 No_of_seqs 1 out of 3 Neff 1.0 Searched_HMMs 13730 Date Wed May 25 00:48:39 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i peg_873.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d2pbza2 d.142.1.9 (A:100-312) 22.1 13 0.00094 17.0 0.9 27 4-30 88-115 (213) 2 d2dexx3 d.126.1.5 (X:294-663) 10.6 26 0.0019 15.6 -0.1 17 11-27 109-125 (370) 3 d3buxb2 a.48.1.1 (B:48-177) N- 8.8 29 0.0021 15.3 -0.4 13 14-26 25-37 (130) 4 d1f1sa3 b.24.1.1 (A:912-984) H 5.1 97 0.0071 12.7 0.8 20 9-28 30-49 (73) 5 d1eg1a_ b.29.1.10 (A:) Cellobi 4.6 1.3E+02 0.0091 12.1 1.4 18 18-35 242-260 (371) 6 d2a7ya1 b.34.6.3 (A:1-80) Hypo 4.3 1.3E+02 0.0095 12.0 1.0 10 20-29 32-41 (80) 7 d1laja_ b.121.4.5 (A:) Cucumov 3.7 1.5E+02 0.011 11.7 1.2 20 16-35 65-84 (174) 8 d3ovwa_ b.29.1.10 (A:) Cellobi 3.5 1.6E+02 0.011 11.6 1.3 17 17-33 258-275 (400) 9 d1n7oa2 b.24.1.1 (A:815-890) H 3.4 1.6E+02 0.011 11.6 0.7 17 11-27 31-47 (76) 10 d1yfna1 b.136.1.1 (A:4-111) St 3.4 1.6E+02 0.012 11.6 2.0 18 14-31 45-62 (108) No 1 >d2pbza2 d.142.1.9 (A:100-312) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Thermococcus kodakaraensis [TaxId: 311400]} Probab=22.12 E-value=13 Score=17.02 Aligned_cols=27 Identities=26% Similarity=0.463 Sum_probs=20.8 Q ss_pred EEEEEEECCCCCEEEECCCC-CEEEEEE Q ss_conf 66764202112168962899-8079999 Q 537021.9.peg.8 4 RAIEMRQSTIDGKLKLNTSP-PYTVTCF 30 (41) Q Consensus 4 raiemrqstidgklklntsp-pytvtcf 30 (41) -.++.|.+++||-+.+-..+ +|+|+-- T Consensus 88 lg~DrR~~~~dg~~r~pa~~~~~~v~Gn 115 (213) T d2pbza2 88 LGVDERVLIADGNARWPVKPLPYTIVGN 115 (213) T ss_dssp EEEEEEEETTCSSSSSCCSCCCCCEEEE T ss_pred EEEEEEEECCCCCCCCCCCCCCEEEECC T ss_conf 7656544336655346666787488867 No 2 >d2dexx3 d.126.1.5 (X:294-663) Peptidylarginine deiminase Pad4, catalytic C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Probab=10.61 E-value=26 Score=15.56 Aligned_cols=17 Identities=47% Similarity=0.573 Sum_probs=13.2 Q ss_pred CCCCCEEEECCCCCEEE Q ss_conf 21121689628998079 Q 537021.9.peg.8 11 STIDGKLKLNTSPPYTV 27 (41) Q Consensus 11 stidgklklntsppytv 27 (41) +++|.-=.|.+||||++ T Consensus 109 ~~lDSfGNLEvsPPvt~ 125 (370) T d2dexx3 109 SGLDSFGNLEVSPPVTV 125 (370) T ss_dssp CGGGSGGGEEECCCEEE T ss_pred CCCCCCCCCCCCCCEEC T ss_conf 20235677344798625 No 3 >d3buxb2 a.48.1.1 (B:48-177) N-terminal domain of cbl (N-cbl) {Human (Homo sapiens) [TaxId: 9606]} Probab=8.80 E-value=29 Score=15.29 Aligned_cols=13 Identities=54% Similarity=0.956 Sum_probs=9.6 Q ss_pred CCEEEECCCCCEE Q ss_conf 2168962899807 Q 537021.9.peg.8 14 DGKLKLNTSPPYT 26 (41) Q Consensus 14 dgklklntsppyt 26 (41) |-+|.|..||||- T Consensus 25 ~Prl~LKnSPP~i 37 (130) T d3buxb2 25 NPKLALKNSPPYI 37 (130) T ss_dssp CGGGCCCSCSSCH T ss_pred CCCCCCCCCCCHH T ss_conf 9764457899528 No 4 >d1f1sa3 b.24.1.1 (A:912-984) Hyaluronate lyase {Streptococcus agalactiae [TaxId: 1311]} Probab=5.11 E-value=97 Score=12.67 Aligned_cols=20 Identities=30% Similarity=0.521 Sum_probs=16.9 Q ss_pred EECCCCCEEEECCCCCEEEE Q ss_conf 20211216896289980799 Q 537021.9.peg.8 9 RQSTIDGKLKLNTSPPYTVT 28 (41) Q Consensus 9 rqstidgklklntsppytvt 28 (41) ..|+|.++++++.+--||+. T Consensus 30 s~s~i~~qf~~~k~GlYtiq 49 (73) T d1f1sa3 30 QESLINNQFKMNKAGLYLVQ 49 (73) T ss_dssp SCEEETTTEEECSCEEEEEE T ss_pred HHHHHCCEEEEEECEEEEEE T ss_conf 04332571688614159999 No 5 >d1eg1a_ b.29.1.10 (A:) Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) {Trichoderma reesei, Endoglucanase I [TaxId: 51453]} Probab=4.60 E-value=1.3e+02 Score=12.12 Aligned_cols=18 Identities=33% Similarity=0.416 Sum_probs=12.6 Q ss_pred EECCCCCEE-EEEEEEECC Q ss_conf 962899807-999999515 Q 537021.9.peg.8 18 KLNTSPPYT-VTCFLTFEN 35 (41) Q Consensus 18 klntsppyt-vtcfltfen 35 (41) +.+|+-|+| ||-|++-.+ T Consensus 242 tVDT~k~fTVVTQF~t~~~ 260 (371) T d1eg1a_ 242 TVDTSKTFTIITQFNTDNG 260 (371) T ss_dssp SSCTTSCEEEEEEEEETTS T ss_pred CCCCCCCEEEEEEEECCCC T ss_conf 3026897389988665898 No 6 >d2a7ya1 b.34.6.3 (A:1-80) Hypothetical protein Rv2302/MT2359 {Mycobacterium tuberculosis [TaxId: 1773]} Probab=4.28 E-value=1.3e+02 Score=12.03 Aligned_cols=10 Identities=50% Similarity=0.949 Sum_probs=7.6 Q ss_pred CCCCCEEEEE Q ss_conf 2899807999 Q 537021.9.peg.8 20 NTSPPYTVTC 29 (41) Q Consensus 20 ntsppytvtc 29 (41) +-+|||.|-- T Consensus 32 dG~PPY~VRw 41 (80) T d2a7ya1 32 DGSPPYVVRW 41 (80) T ss_dssp SSCSCEEEEE T ss_pred CCCCCEEEEE T ss_conf 9999988895 No 7 >d1laja_ b.121.4.5 (A:) Cucumovirus coat protein {TAV (Tomato aspermy virus) [TaxId: 12315]} Probab=3.68 E-value=1.5e+02 Score=11.72 Aligned_cols=20 Identities=25% Similarity=0.645 Sum_probs=16.7 Q ss_pred EEEECCCCCEEEEEEEEECC Q ss_conf 68962899807999999515 Q 537021.9.peg.8 16 KLKLNTSPPYTVTCFLTFEN 35 (41) Q Consensus 16 klklntsppytvtcfltfen 35 (41) ++.+|-+|-+.-||+++... T Consensus 65 q~rlNP~p~fdstvwVtvRk 84 (174) T d1laja_ 65 QVRLNPSPKFNSTIWVSLRR 84 (174) T ss_dssp EEEEEECTTCCCCEEEEEEC T ss_pred EEECCCCCCCCCCEEEEEEE T ss_conf 96336784547624799984 No 8 >d3ovwa_ b.29.1.10 (A:) Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) {Fusarium oxysporum [TaxId: 5507]} Probab=3.51 E-value=1.6e+02 Score=11.64 Aligned_cols=17 Identities=24% Similarity=0.493 Sum_probs=12.6 Q ss_pred EEECCCCCEEE-EEEEEE Q ss_conf 89628998079-999995 Q 537021.9.peg.8 17 LKLNTSPPYTV-TCFLTF 33 (41) Q Consensus 17 lklntsppytv-tcfltf 33 (41) ++++|+-|+|| |-|++- T Consensus 258 ~tVDT~k~fTVVTQF~~~ 275 (400) T d3ovwa_ 258 YKVDSTRKFTVTSQFVAN 275 (400) T ss_dssp SSEETTSCEEEEEEEEEC T ss_pred EEECCCCCEEEEEEEECC T ss_conf 142379973899788708 No 9 >d1n7oa2 b.24.1.1 (A:815-890) Hyaluronate lyase {Streptococcus pneumoniae [TaxId: 1313]} Probab=3.41 E-value=1.6e+02 Score=11.65 Aligned_cols=17 Identities=29% Similarity=0.458 Sum_probs=0.0 Q ss_pred CCCCCEEEECCCCCEEE Q ss_conf 21121689628998079 Q 537021.9.peg.8 11 STIDGKLKLNTSPPYTV 27 (41) Q Consensus 11 stidgklklntsppytv 27 (41) |+|.+.++++.+--||+ T Consensus 31 s~i~~qf~~~k~GlYti 47 (76) T d1n7oa2 31 STISNQFQVLKRGVYTI 47 (76) T ss_dssp EEETTTEEECSSEEEEE T ss_pred HHHCCEEEEEECEEEEE T ss_conf 33257068851415999 No 10 >d1yfna1 b.136.1.1 (A:4-111) Stringent starvation protein B, SspB {Escherichia coli [TaxId: 562]} Probab=3.40 E-value=1.6e+02 Score=11.58 Aligned_cols=18 Identities=33% Similarity=0.418 Sum_probs=0.0 Q ss_pred CCEEEECCCCCEEEEEEE Q ss_conf 216896289980799999 Q 537021.9.peg.8 14 DGKLKLNTSPPYTVTCFL 31 (41) Q Consensus 14 dgklklntsppytvtcfl 31 (41) ||++-||-||-.+....+ T Consensus 45 dg~IvLNIsp~Av~~L~i 62 (108) T d1yfna1 45 DGQIVLNIAPRAVGNLEL 62 (108) T ss_dssp TTEEEEECSGGGCEEEEE T ss_pred CCEEEEECCHHHCCCEEE T ss_conf 983999868320147788 Done!