Query 537021.9.peg.874_1
Match_columns 47
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 13730
Date Wed May 25 01:20:21 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i peg_874.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1pi1a_ a.29.7.1 (A:) Mob1a {H 8.9 61 0.0045 13.3 1.3 11 15-25 122-132 (185)
2 d2pxrc1 a.73.1.1 (C:1-145) HIV 7.4 46 0.0034 13.9 0.2 44 2-45 29-86 (145)
3 d1bama_ c.52.1.3 (A:) Restrict 5.3 50 0.0037 13.7 -0.6 11 5-15 157-168 (213)
4 g1pya.1 d.155.1.1 (A:,B:) Hist 5.2 1.1E+02 0.0077 12.1 1.2 11 32-42 55-65 (310)
5 d2fgea1 d.185.1.1 (A:540-797) 2.3 2.1E+02 0.015 10.5 1.1 35 5-39 47-82 (258)
6 d1v32a_ a.42.1.1 (A:) Hypothet 2.0 2.1E+02 0.015 10.5 0.0 16 3-18 70-85 (101)
7 d2eiaa2 a.73.1.1 (A:17-147) EI 1.9 2.4E+02 0.017 10.3 0.0 42 2-43 13-69 (131)
8 d2h3ka1 b.1.28.1 (A:1-144) Iro 1.6 2.8E+02 0.02 9.9 0.3 11 35-45 123-133 (144)
9 d1ssqa_ b.81.1.6 (A:) Serine a 1.6 2.9E+02 0.021 9.8 3.3 26 12-37 104-129 (241)
10 d1tzyb_ a.22.1.1 (B:) Histone 1.5 2.9E+02 0.021 9.8 1.3 15 13-27 5-19 (92)
No 1
>d1pi1a_ a.29.7.1 (A:) Mob1a {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.87 E-value=61 Score=13.26 Aligned_cols=11 Identities=55% Similarity=0.854 Sum_probs=8.3
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999972
Q 537021.9.peg.8 15 LMLYRVYHHIH 25 (47)
Q Consensus 15 lmlyrvyhhih 25 (47)
-.|+|||-||-
T Consensus 122 rrLfRVyaHiY 132 (185)
T d1pi1a_ 122 KRLFRVYAHIY 132 (185)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
T ss_conf 99999998767
No 2
>d2pxrc1 a.73.1.1 (C:1-145) HIV-1 capsid protein {Human immunodeficiency virus type 1 [TaxId: 11676]}
Probab=7.39 E-value=46 Score=13.91 Aligned_cols=44 Identities=23% Similarity=0.357 Sum_probs=24.7
Q ss_pred CHHCCHHHCCHHHHH-----HHHHHHHHHCCHH---------HHHHHHHHHHHHEEEE
Q ss_conf 100074438069999-----9999999720117---------8999986210030343
Q 537021.9.peg.8 2 DKLLNAEEIPYFSLM-----LYRVYHHIHRDNA---------HILQKEIVSYDRTLMV 45 (47)
Q Consensus 2 dkllnaeeipyfslm-----lyrvyhhihrdna---------hilqkeivsydrtlmv 45 (47)
+|.+++|-||.||-. -|+..+.+..-.. .++.+|.-.|||+--+
T Consensus 29 ek~f~pEvipmF~ALSeg~tP~D~n~mLn~vgghqaamQilkd~InEeaaewDr~HP~ 86 (145)
T d2pxrc1 29 EKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPV 86 (145)
T ss_dssp HHTTSTTHHHHHHHTCTTCCHHHHHHHHHTTGGGTHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred HCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 6268888878999970898738789998863662889999999881999987145998
No 3
>d1bama_ c.52.1.3 (A:) Restriction endonuclease BamHI {Bacillus amyloliquefaciens [TaxId: 1390]}
Probab=5.26 E-value=50 Score=13.71 Aligned_cols=11 Identities=64% Similarity=1.114 Sum_probs=4.6
Q ss_pred CCHHHC-CHHHH
Q ss_conf 074438-06999
Q 537021.9.peg.8 5 LNAEEI-PYFSL 15 (47)
Q Consensus 5 lnaeei-pyfsl 15 (47)
-|-+|+ |||++
T Consensus 157 gNf~ELePYF~~ 168 (213)
T d1bama_ 157 TNFEELEPYFEL 168 (213)
T ss_dssp CCHHHHGGGGGG
T ss_pred CCHHHCCCCHHH
T ss_conf 782222533134
No 4
>g1pya.1 d.155.1.1 (A:,B:) Histidine decarboxylase {Lactobacillus sp., strain 30a [TaxId: 1591]}
Probab=5.20 E-value=1.1e+02 Score=12.05 Aligned_cols=11 Identities=55% Similarity=0.827 Sum_probs=5.8
Q ss_pred HHHHHHHHHHE
Q ss_conf 99986210030
Q 537021.9.peg.8 32 LQKEIVSYDRT 42 (47)
Q Consensus 32 lqkeivsydrt 42 (47)
+-..||||||.
T Consensus 55 ~ld~IVsyDRa 65 (310)
T g1pya.1 55 VLDGIVSYDRA 65 (310)
T ss_dssp HHHHHHHHHHH
T ss_pred HHCCEEEECHH
T ss_conf 12150220313
No 5
>d2fgea1 d.185.1.1 (A:540-797) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=2.27 E-value=2.1e+02 Score=10.55 Aligned_cols=35 Identities=17% Similarity=0.102 Sum_probs=17.7
Q ss_pred CCHHHCCHHHHHHHHHHH-HHHCCHHHHHHHHHHHH
Q ss_conf 074438069999999999-97201178999986210
Q 537021.9.peg.8 5 LNAEEIPYFSLMLYRVYH-HIHRDNAHILQKEIVSY 39 (47)
Q Consensus 5 lnaeeipyfslmlyrvyh-hihrdnahilqkeivsy 39 (47)
+..|++||++|...-.-. -..+.+..-++++|-.+
T Consensus 47 l~~e~~~yl~L~~~~l~~~gt~~~~y~e~~~~i~~~ 82 (258)
T d2fgea1 47 LKHELLPLVPLFCQSLLEMGTKDLTFVQLNQLIGRK 82 (258)
T ss_dssp SCTTTGGGHHHHHHHHHHSCCSSSCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
T ss_conf 999999878999999860688999999999999985
No 6
>d1v32a_ a.42.1.1 (A:) Hypothetical protein AT5G08430 (rafl09-47-k03) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=2.04 E-value=2.1e+02 Score=10.51 Aligned_cols=16 Identities=13% Similarity=0.063 Sum_probs=9.1
Q ss_pred HHCCHHHCCHHHHHHH
Q ss_conf 0007443806999999
Q 537021.9.peg.8 3 KLLNAEEIPYFSLMLY 18 (47)
Q Consensus 3 kllnaeeipyfslmly 18 (47)
+|++-+.+.||.+.-|
T Consensus 70 ~Lfg~~~v~~f~i~k~ 85 (101)
T d1v32a_ 70 LLFGTRTIFRMKVYDL 85 (101)
T ss_dssp HHTCCSEEETTHHHHH
T ss_pred HHHCCCCCCHHHHHHH
T ss_conf 9858896468879999
No 7
>d2eiaa2 a.73.1.1 (A:17-147) EIAV capsid protein p26 {Equine infectious anemia virus [TaxId: 11665]}
Probab=1.88 E-value=2.4e+02 Score=10.27 Aligned_cols=42 Identities=17% Similarity=0.199 Sum_probs=20.9
Q ss_pred CHHCCHHHCC-HHHHH-----HHHHHHHH-----HCCHHHHH----HHHHHHHHHEE
Q ss_conf 1000744380-69999-----99999997-----20117899----99862100303
Q 537021.9.peg.8 2 DKLLNAEEIP-YFSLM-----LYRVYHHI-----HRDNAHIL----QKEIVSYDRTL 43 (47)
Q Consensus 2 dkllnaeeip-yfslm-----lyrvyhhi-----hrdnahil----qkeivsydrtl 43 (47)
+|-+.+|.+| .||-. -|...+.+ |+..-.++ .+|--.|||+-
T Consensus 13 ek~f~~E~v~~mFsalSeg~tp~Din~mLn~vgg~qaa~Qiikd~INEeAaeWDr~H 69 (131)
T d2eiaa2 13 TNGLLNEASQNLFGILSVDCTSEEMNAFLDVVPGQAGQKQILLDAIDKIADDWDNRH 69 (131)
T ss_dssp HTCSSSHHHHHHHHHHCTTCCHHHHHHHHHSSCCCTHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 827894143899999948887899999980378508799999999989998998749
No 8
>d2h3ka1 b.1.28.1 (A:1-144) Iron-regulated surface determinant protein H, IsdH {Staphylococcus aureus [TaxId: 1280]}
Probab=1.61 E-value=2.8e+02 Score=9.91 Aligned_cols=11 Identities=45% Similarity=0.579 Sum_probs=6.6
Q ss_pred HHHHHHHEEEE
Q ss_conf 86210030343
Q 537021.9.peg.8 35 EIVSYDRTLMV 45 (47)
Q Consensus 35 eivsydrtlmv 45 (47)
|-..||-|+||
T Consensus 123 ee~~YDYT~mv 133 (144)
T d2h3ka1 123 EETNYDYTKLV 133 (144)
T ss_dssp SCEEEEEEEEE
T ss_pred CCCCCCEEEEE
T ss_conf 53445437888
No 9
>d1ssqa_ b.81.1.6 (A:) Serine acetyltransferase {Haemophilus influenzae [TaxId: 727]}
Probab=1.55 E-value=2.9e+02 Score=9.81 Aligned_cols=26 Identities=19% Similarity=0.370 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf 69999999999972011789999862
Q 537021.9.peg.8 12 YFSLMLYRVYHHIHRDNAHILQKEIV 37 (47)
Q Consensus 12 yfslmlyrvyhhihrdnahilqkeiv 37 (47)
+..+..||+-|..++.+...+-..+-
T Consensus 104 f~Al~~yRiah~l~~~~~~~la~~i~ 129 (241)
T d1ssqa_ 104 FHAIQSYRITHYLWNQNRKSLALYLQ 129 (241)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 78999876521445520489999999
No 10
>d1tzyb_ a.22.1.1 (B:) Histone H2B {Chicken (Gallus gallus), erythrocytes [TaxId: 9031]}
Probab=1.54 E-value=2.9e+02 Score=9.79 Aligned_cols=15 Identities=33% Similarity=0.895 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHCC
Q ss_conf 999999999997201
Q 537021.9.peg.8 13 FSLMLYRVYHHIHRD 27 (47)
Q Consensus 13 fslmlyrvyhhihrd 27 (47)
|+.-.|||-..+|-|
T Consensus 5 y~~Yi~kVLKqVhp~ 19 (92)
T d1tzyb_ 5 YSIYVYKVLKQVHPD 19 (92)
T ss_dssp CHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHCCC
T ss_conf 889999999861898
Done!