RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddB 21,608 sequences; 5,994,473 total letters Searching..................................................done Query= 537021.9.peg.885_1 (54 letters) >gnl|CDD|184095 PRK13504, PRK13504, sulfite reductase subunit beta; Provisional. Length = 569 Score = 27.1 bits (61), Expect = 1.1 Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 1/26 (3%) Query: 6 LTSNINLTLTGITFNDK-KIQELIRE 30 LT+N NL + + +DK KI+ L+RE Sbjct: 390 LTANQNLIIANVPPSDKAKIEALLRE 415 >gnl|CDD|178676 PLN03130, PLN03130, ABC transporter C family member; Provisional. Length = 1622 Score = 24.7 bits (54), Expect = 5.9 Identities = 10/19 (52%), Positives = 12/19 (63%), Gaps = 1/19 (5%) Query: 21 DKKIQELIREELRGC-MTI 38 D IQ+ IREE + C M I Sbjct: 1410 DALIQKTIREEFKSCTMLI 1428 >gnl|CDD|147970 pfam06097, DUF945, Bacterial protein of unknown function (DUF945). This family consists of several hypothetical bacterial proteins of unknown function. Length = 460 Score = 23.9 bits (52), Expect = 9.9 Identities = 8/21 (38%), Positives = 11/21 (52%) Query: 1 MDAGKLTSNINLTLTGITFND 21 G+ T N+NL+L T D Sbjct: 348 NAKGESTFNLNLSLADPTSAD 368 Database: CddB Posted date: Feb 4, 2011 9:54 PM Number of letters in database: 5,994,473 Number of sequences in database: 21,608 Lambda K H 0.317 0.135 0.362 Gapped Lambda K H 0.267 0.0706 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21608 Number of Hits to DB: 793,736 Number of extensions: 33288 Number of successful extensions: 89 Number of sequences better than 10.0: 1 Number of HSP's gapped: 89 Number of HSP's successfully gapped: 8 Length of query: 54 Length of database: 5,994,473 Length adjustment: 26 Effective length of query: 28 Effective length of database: 5,432,665 Effective search space: 152114620 Effective search space used: 152114620 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 50 (23.1 bits)