RPS-BLAST 2.2.22 [Sep-27-2009]

Database: pdb70 
           24,244 sequences; 5,693,230 total letters

Searching..................................................done

Query= 537021.9.peg.885_1
         (54 letters)



>1h30_A GAS6, growth-arrest-specific protein; laminin G-domain protein,
           vitamin K-dependent protein, AXL/SKY/MER ligand, laminin
           G- like domain; 2.2A {Homo sapiens} SCOP: b.29.1.4
           b.29.1.4 PDB: 2c5d_A*
          Length = 422

 Score = 29.3 bits (65), Expect = 0.21
 Identities = 12/28 (42%), Positives = 19/28 (67%)

Query: 9   NINLTLTGITFNDKKIQELIREELRGCM 36
           ++NLT+ GI F++K + + I   L GCM
Sbjct: 162 HLNLTVGGIPFHEKDLVQPINPRLDGCM 189


  Database: pdb70
    Posted date:  Jan 26, 2011 11:21 AM
  Number of letters in database: 5,693,230
  Number of sequences in database:  24,244
  
Lambda     K      H
   0.317    0.135    0.362 

Gapped
Lambda     K      H
   0.267   0.0564    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 24244
Number of Hits to DB: 418,999
Number of extensions: 12951
Number of successful extensions: 77
Number of sequences better than 10.0: 1
Number of HSP's gapped: 77
Number of HSP's successfully gapped: 8
Length of query: 54
Length of database: 5,693,230
Length adjustment: 26
Effective length of query: 28
Effective length of database: 5,062,886
Effective search space: 141760808
Effective search space used: 141760808
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 50 (23.4 bits)