HHsearch alignment for GI: peg_887 and conserved domain: CHL00181

Probab=92.50  E-value=0.94  Score=25.73  Aligned_cols=104  Identities=16%  Similarity=0.186  Sum_probs=60.9

Q ss_pred             CEEEEECCCCCCHHHHHHHHHHHC-------CCEEEECCHHHHHCCCCCC-CCCCCHHHHCCCEEEECCEECCCCCCCH-
Q ss_conf             499998798733449999999881-------9879750044211682224-2346768742340433144513765589-
Q 537021.9.peg.8   11 KAIFISGPTASGKSLCAVNLAHKF-------NGAIINADSMQVYDTLRIL-TSRPSDQDMQSIPHYLYGYVPAQKSYST-   81 (133)
Q Consensus        11 ~ii~I~GpTasGKT~lai~LA~~~-------~~~IIs~DS~QvYk~l~Ig-TaKps~~e~~~v~H~lid~~~~~e~~sv-   81 (133)
T Consensus        60 ~h~vF~GnPGTGKTTVARl~a~il~~lG~L~~g~vve~~r~dLvg~-yvG~Ta~kt~~~i---~~a~GGVLfIDEAY~L~  135 (287)
T CHL00181         60 LHMSFTGSPGTGKTTVALKMADILYRLGYIKKGHLITVTRDDLVGQ-YIGHTAPKTKEVL---KKAMGGVLFIDEAYYLY  135 (287)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHCCC-CCCCCHHHHHHHH---HHCCCCEEEEECHHHHC
T ss_conf             5388878998679999999999999869955895899535884163-5352169999999---96459879982446535


Q ss_pred             -----HHHHHHHHHHHHHHHHHHCHHHHHHHCCCEEEEECCCHHHHHHHH
Q ss_conf             -----999999999999998410000013325985599889308999984
Q 537021.9.peg.8   82 -----GKWLRYAIKKIAEVQKTVFTYNSRWDRSLFSCINRSTLYYARNTY  126 (133)
Q Consensus        82 -----~~f~~~a~~~i~~i~~~~~~~~~~~~r~~~piivGGTglY~~al~  126 (133)
T Consensus       136 ~~~~~~dfg~eaidtLl~~me--------~~~~~lvvI~AGY~~eM~~fl  177 (287)
T CHL00181        136 KPDNERDYGAEAIEILLQVME--------NQRDDLVVIFAGYKDRMDKFY  177 (287)
T ss_pred             CCCCCCCCHHHHHHHHHHHHH--------HCCCCEEEEEECCHHHHHHHH
T ss_conf             788999837999999999987--------079988999846789999999