HHsearch alignment for GI: peg_887 and conserved domain: COG0541
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion].
Probab=91.03 E-value=1.2 Score=24.98 Aligned_cols=46 Identities=28% Similarity=0.372 Sum_probs=35.6
Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHC-----CCEEEECCHHHHHCCCCCCCCCCCHHHHC
Q ss_conf 5898499998798733449999999881-----98797500442116822242346768742
Q 537021.9.peg.8 7 STHTKAIFISGPTASGKSLCAVNLAHKF-----NGAIINADSMQVYDTLRILTSRPSDQDMQ 63 (133)
Q Consensus 7 ~~~~~ii~I~GpTasGKT~lai~LA~~~-----~~~IIs~DS~QvYk~l~IgTaKps~~e~~ 63 (133)
T Consensus 97 ~~~P~vImmvGLQGsGKTTt~~KLA~~lkk~~~kvllVaaD-----------~~RpAA~eQL 147 (451)
T COG0541 97 KKPPTVILMVGLQGSGKTTTAGKLAKYLKKKGKKVLLVAAD-----------TYRPAAIEQL 147 (451)
T ss_pred CCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECC-----------CCCHHHHHHH
T ss_conf 89985899981567974868999999999749945898505-----------6786899999