HHsearch alignment for GI: peg_887 and conserved domain: COG1219
>COG1219 ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones].
Probab=97.47 E-value=0.00012 Score=49.33 Aligned_cols=120 Identities=18% Similarity=0.115 Sum_probs=74.1
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCCCEEEECCHHHHHCCCCCCCC-----------CCCHHHHCCCEEEECCEEC----
Q ss_conf 8499998798733449999999881987975004421168222423-----------4676874234043314451----
Q 537021.9.peg.8 10 TKAIFISGPTASGKSLCAVNLAHKFNGAIINADSMQVYDTLRILTS-----------RPSDQDMQSIPHYLYGYVP---- 74 (133)
Q Consensus 10 ~~ii~I~GpTasGKT~lai~LA~~~~~~IIs~DS~QvYk~l~IgTa-----------Kps~~e~~~v~H~lid~~~---- 74 (133)
T Consensus 97 KSNILLiGPTGsGKTlLAqTLAk~LnVPFaiADATtLTEAGYVGEDVENillkLlqaadydV~rAerGIIyIDEIDKIar 176 (408)
T COG1219 97 KSNILLIGPTGSGKTLLAQTLAKILNVPFAIADATTLTEAGYVGEDVENILLKLLQAADYDVERAERGIIYIDEIDKIAR 176 (408)
T ss_pred ECCEEEECCCCCCHHHHHHHHHHHHCCCEEECCCCCHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHCCEEEEECHHHHHC
T ss_conf 03179988899757799999999848984751444121066355008999999998764588888288599851025420
Q ss_pred CCC------CCCHHHHHHHHHHHHHHHHHHHCHHHH---------HHHCCCEEEEECCCHHHHHHHHCCC
Q ss_conf 376------558999999999999999841000001---------3325985599889308999984184
Q 537021.9.peg.8 75 AQK------SYSTGKWLRYAIKKIAEVQKTVFTYNS---------RWDRSLFSCINRSTLYYARNTYCNK 129 (133)
Q Consensus 75 ~~e------~~sv~~f~~~a~~~i~~i~~~~~~~~~---------~~~r~~~piivGGTglY~~al~~~~ 129 (133)
T Consensus 177 kSen~SITRDVSGEGVQQALLKiiEGTvasVPPqGGRKHP~Qe~iqvDT~NILFIcgGAF~GlekiI~~R 246 (408)
T COG1219 177 KSENPSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEFIQVDTSNILFICGGAFAGLEKIIKKR 246 (408)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHH
T ss_conf 5789872343673589999999970751023999888798420488737634678244010399999986