HHsearch alignment for GI: peg_887 and conserved domain: COG1224
>COG1224 TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription].
Probab=96.85 E-value=0.0011 Score=43.50 Aligned_cols=34 Identities=26% Similarity=0.541 Sum_probs=28.5
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCC----------CEEEECC
Q ss_conf 984999987987334499999998819----------8797500
Q 537021.9.peg.8 9 HTKAIFISGPTASGKSLCAVNLAHKFN----------GAIINAD 42 (133)
Q Consensus 9 ~~~ii~I~GpTasGKT~lai~LA~~~~----------~~IIs~D 42 (133)
T Consensus 64 aGrgiLi~GppgTGKTAlA~gIa~eLG~dvPF~~isgsEiYS~E 107 (450)
T COG1224 64 AGRGILIVGPPGTGKTALAMGIARELGEDVPFVAISGSEIYSLE 107 (450)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCEEEEEC
T ss_conf 66179997899976889999999985899982150133223310