HHsearch alignment for GI: peg_887 and conserved domain: COG1484
>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair].
Probab=94.25 E-value=0.042 Score=33.89 Aligned_cols=80 Identities=8% Similarity=0.175 Sum_probs=47.9
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHC---CCEEEECCHHHHHCCCCCCCCC----CCHH-HHCCCEEEECCEEC--CCCC
Q ss_conf 98499998798733449999999881---9879750044211682224234----6768-74234043314451--3765
Q 537021.9.peg.8 9 HTKAIFISGPTASGKSLCAVNLAHKF---NGAIINADSMQVYDTLRILTSR----PSDQ-DMQSIPHYLYGYVP--AQKS 78 (133)
Q Consensus 9 ~~~ii~I~GpTasGKT~lai~LA~~~---~~~IIs~DS~QvYk~l~IgTaK----ps~~-e~~~v~H~lid~~~--~~e~ 78 (133)
T Consensus 104 ~~~nl~l~G~~G~GKthLa~Ai~~~l~~~g~sv~f~~~~el~~~Lk~~~~~~~~~~~l~~~l~~~dlLIiDDlG~~~~~~ 183 (254)
T COG1484 104 RGENLVLLGPPGVGKTHLAIAIGNELLKAGISVLFITAPDLLSKLKAAFDEGRLEEKLLRELKKVDLLIIDDIGYEPFSQ 183 (254)
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCC
T ss_conf 58828998999987999999999999983984999885999999999874552689999887528989982367766881
Q ss_pred CCHHHHHHHH
Q ss_conf 5899999999
Q 537021.9.peg.8 79 YSTGKWLRYA 88 (133)
Q Consensus 79 ~sv~~f~~~a 88 (133)
T Consensus 184 ~~~~~~~q~I 193 (254)
T COG1484 184 EEADLLFQLI 193 (254)
T ss_pred HHHHHHHHHH
T ss_conf 5587999999