HHsearch alignment for GI: peg_887 and conserved domain: COG1643

>COG1643 HrpA HrpA-like helicases [DNA replication, recombination, and repair].
Probab=90.86  E-value=0.15  Score=30.62  Aligned_cols=38  Identities=21%  Similarity=0.251  Sum_probs=23.3

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHC----CCEEEECCHHH
Q ss_conf             898499998798733449999999881----98797500442
Q 537021.9.peg.8    8 THTKAIFISGPTASGKSLCAVNLAHKF----NGAIINADSMQ   45 (133)
Q Consensus         8 ~~~~ii~I~GpTasGKT~lai~LA~~~----~~~IIs~DS~Q   45 (133)
T Consensus        63 ~~~~vvii~getGsGKTTqlP~~lle~g~~~~g~I~~tQPRR  104 (845)
T COG1643          63 EQNQVVIIVGETGSGKTTQLPQFLLEEGLGIAGKIGCTQPRR  104 (845)
T ss_pred             HHCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCCHH
T ss_conf             869789986799887587889999960016687599658438