HHsearch alignment for GI: peg_887 and conserved domain: COG2255

>COG2255 RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair].
Probab=90.33  E-value=0.3  Score=28.74  Aligned_cols=29  Identities=21%  Similarity=0.316  Sum_probs=24.5

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHCCCEEEE
Q ss_conf             99998798733449999999881987975
Q 537021.9.peg.8   12 AIFISGPTASGKSLCAVNLAHKFNGAIIN   40 (133)
Q Consensus        12 ii~I~GpTasGKT~lai~LA~~~~~~IIs   40 (133)
T Consensus        54 HvLl~GPPGlGKTTLA~IIA~Emgvn~k~   82 (332)
T COG2255          54 HVLLFGPPGLGKTTLAHIIANELGVNLKI   82 (332)
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHCCCEEE
T ss_conf             47864799876888999999985677376