HHsearch alignment for GI: peg_887 and conserved domain: COG2804
>COG2804 PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion].
Probab=94.68 E-value=0.031 Score=34.69 Aligned_cols=32 Identities=28% Similarity=0.436 Sum_probs=25.5
Q ss_pred ECCCCCEEEEECCCCCCHHHHHHHHHHHCCCE
Q ss_conf 05898499998798733449999999881987
Q 537021.9.peg.8 6 LSTHTKAIFISGPTASGKSLCAVNLAHKFNGA 37 (133)
Q Consensus 6 ~~~~~~ii~I~GpTasGKT~lai~LA~~~~~~ 37 (133)
T Consensus 254 ~~~p~GliLvTGPTGSGKTTTLY~~L~~ln~~ 285 (500)
T COG2804 254 LNRPQGLILVTGPTGSGKTTTLYAALSELNTP 285 (500)
T ss_pred HHCCCEEEEEECCCCCCHHHHHHHHHHHHCCC
T ss_conf 72897089996899998899999999986278